BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 044608
(417 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 233 bits (594), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 124/300 (41%), Positives = 182/300 (60%), Gaps = 8/300 (2%)
Query: 1 MDKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELK-QRYASWEDCLNLREVKCLRKLNH 59
M+ + +++G G +G V++A ++ TGE VA+K+++ +RE+ L++LNH
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 60 SNIVKLKELIQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQ 119
NIVKL ++I N+LYLVFE + +L + M A P IK++LFQ+ QGLS+ H
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLSFCHS 121
Query: 120 NGFFHRDLKPENLLV-SQGIIKIADFGLAREIKSGPP---YTNYVGSRWYRAPEILLQSE 175
+ HRDLKP+NLL+ ++G IK+ADFGLAR G P YT+ V + WYRAPEILL +
Sbjct: 122 HRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVTLWYRAPEILLGCK 179
Query: 176 LYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQARAIK 235
YS+ D+W++G I AE+ T LFPG SE DQ+++I LG+P W G+ K
Sbjct: 180 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP-GVTSMPDYK 238
Query: 236 YQFPQLPRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFFKRCFYAPPHIR 295
FP+ R + S ++P +D SL + +DP+KR +A AL HPFF+ PH+R
Sbjct: 239 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVPHLR 298
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 233 bits (593), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 123/300 (41%), Positives = 182/300 (60%), Gaps = 8/300 (2%)
Query: 1 MDKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELK-QRYASWEDCLNLREVKCLRKLNH 59
M+ + +++G G +G V++A ++ TGE VA+K+++ +RE+ L++LNH
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 60 SNIVKLKELIQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQ 119
NIVKL ++I N+LYLVFE + +L + M A P IK++LFQ+ QGL++ H
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 121
Query: 120 NGFFHRDLKPENLLV-SQGIIKIADFGLAREIKSGPP---YTNYVGSRWYRAPEILLQSE 175
+ HRDLKP+NLL+ ++G IK+ADFGLAR G P YT+ V + WYRAPEILL +
Sbjct: 122 HRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVTLWYRAPEILLGXK 179
Query: 176 LYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQARAIK 235
YS+ D+W++G I AE+ T LFPG SE DQ+++I LG+P W G+ K
Sbjct: 180 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP-GVTSMPDYK 238
Query: 236 YQFPQLPRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFFKRCFYAPPHIR 295
FP+ R + S ++P +D SL + +DP+KR +A AL HPFF+ PH+R
Sbjct: 239 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVPHLR 298
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 233 bits (593), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 123/300 (41%), Positives = 182/300 (60%), Gaps = 8/300 (2%)
Query: 1 MDKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELK-QRYASWEDCLNLREVKCLRKLNH 59
M+ + +++G G +G V++A ++ TGE VA+K+++ +RE+ L++LNH
Sbjct: 9 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 68
Query: 60 SNIVKLKELIQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQ 119
NIVKL ++I N+LYLVFE + +L + M A P IK++LFQ+ QGL++ H
Sbjct: 69 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 128
Query: 120 NGFFHRDLKPENLLV-SQGIIKIADFGLAREIKSGPP---YTNYVGSRWYRAPEILLQSE 175
+ HRDLKP+NLL+ ++G IK+ADFGLAR G P YT+ V + WYRAPEILL +
Sbjct: 129 HRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVTLWYRAPEILLGXK 186
Query: 176 LYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQARAIK 235
YS+ D+W++G I AE+ T LFPG SE DQ+++I LG+P W G+ K
Sbjct: 187 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP-GVTSMPDYK 245
Query: 236 YQFPQLPRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFFKRCFYAPPHIR 295
FP+ R + S ++P +D SL + +DP+KR +A AL HPFF+ PH+R
Sbjct: 246 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVPHLR 305
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 232 bits (592), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 123/300 (41%), Positives = 182/300 (60%), Gaps = 8/300 (2%)
Query: 1 MDKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELK-QRYASWEDCLNLREVKCLRKLNH 59
M+ + +++G G +G V++A ++ TGE VA+K+++ +RE+ L++LNH
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 60 SNIVKLKELIQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQ 119
NIVKL ++I N+LYLVFE + +L + M A P IK++LFQ+ QGL++ H
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 121
Query: 120 NGFFHRDLKPENLLV-SQGIIKIADFGLAREIKSGPP---YTNYVGSRWYRAPEILLQSE 175
+ HRDLKP+NLL+ ++G IK+ADFGLAR G P YT+ V + WYRAPEILL +
Sbjct: 122 HRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVTLWYRAPEILLGCK 179
Query: 176 LYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQARAIK 235
YS+ D+W++G I AE+ T LFPG SE DQ+++I LG+P W G+ K
Sbjct: 180 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP-GVTSMPDYK 238
Query: 236 YQFPQLPRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFFKRCFYAPPHIR 295
FP+ R + S ++P +D SL + +DP+KR +A AL HPFF+ PH+R
Sbjct: 239 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVPHLR 298
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 232 bits (591), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 123/300 (41%), Positives = 182/300 (60%), Gaps = 8/300 (2%)
Query: 1 MDKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELK-QRYASWEDCLNLREVKCLRKLNH 59
M+ + +++G G +G V++A ++ TGE VA+K+++ +RE+ L++LNH
Sbjct: 3 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 62
Query: 60 SNIVKLKELIQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQ 119
NIVKL ++I N+LYLVFE + +L + M A P IK++LFQ+ QGL++ H
Sbjct: 63 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 122
Query: 120 NGFFHRDLKPENLLV-SQGIIKIADFGLAREIKSGPP---YTNYVGSRWYRAPEILLQSE 175
+ HRDLKP+NLL+ ++G IK+ADFGLAR G P YT+ V + WYRAPEILL +
Sbjct: 123 HRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVTLWYRAPEILLGCK 180
Query: 176 LYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQARAIK 235
YS+ D+W++G I AE+ T LFPG SE DQ+++I LG+P W G+ K
Sbjct: 181 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP-GVTSMPDYK 239
Query: 236 YQFPQLPRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFFKRCFYAPPHIR 295
FP+ R + S ++P +D SL + +DP+KR +A AL HPFF+ PH+R
Sbjct: 240 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVPHLR 299
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 232 bits (591), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 123/300 (41%), Positives = 182/300 (60%), Gaps = 8/300 (2%)
Query: 1 MDKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELK-QRYASWEDCLNLREVKCLRKLNH 59
M+ + +++G G +G V++A ++ TGE VA+K+++ +RE+ L++LNH
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 60 SNIVKLKELIQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQ 119
NIVKL ++I N+LYLVFE + +L + M A P IK++LFQ+ QGL++ H
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 121
Query: 120 NGFFHRDLKPENLLV-SQGIIKIADFGLAREIKSGPP---YTNYVGSRWYRAPEILLQSE 175
+ HRDLKP+NLL+ ++G IK+ADFGLAR G P YT+ V + WYRAPEILL +
Sbjct: 122 HRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVTLWYRAPEILLGCK 179
Query: 176 LYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQARAIK 235
YS+ D+W++G I AE+ T LFPG SE DQ+++I LG+P W G+ K
Sbjct: 180 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP-GVTSMPDYK 238
Query: 236 YQFPQLPRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFFKRCFYAPPHIR 295
FP+ R + S ++P +D SL + +DP+KR +A AL HPFF+ PH+R
Sbjct: 239 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVPHLR 298
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 232 bits (591), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 123/300 (41%), Positives = 182/300 (60%), Gaps = 8/300 (2%)
Query: 1 MDKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELK-QRYASWEDCLNLREVKCLRKLNH 59
M+ + +++G G +G V++A ++ TGE VA+K+++ +RE+ L++LNH
Sbjct: 1 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 60
Query: 60 SNIVKLKELIQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQ 119
NIVKL ++I N+LYLVFE + +L + M A P IK++LFQ+ QGL++ H
Sbjct: 61 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 120
Query: 120 NGFFHRDLKPENLLV-SQGIIKIADFGLAREIKSGPP---YTNYVGSRWYRAPEILLQSE 175
+ HRDLKP+NLL+ ++G IK+ADFGLAR G P YT+ V + WYRAPEILL +
Sbjct: 121 HRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVTLWYRAPEILLGCK 178
Query: 176 LYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQARAIK 235
YS+ D+W++G I AE+ T LFPG SE DQ+++I LG+P W G+ K
Sbjct: 179 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP-GVTSMPDYK 237
Query: 236 YQFPQLPRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFFKRCFYAPPHIR 295
FP+ R + S ++P +D SL + +DP+KR +A AL HPFF+ PH+R
Sbjct: 238 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVPHLR 297
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 232 bits (591), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 123/300 (41%), Positives = 182/300 (60%), Gaps = 8/300 (2%)
Query: 1 MDKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELK-QRYASWEDCLNLREVKCLRKLNH 59
M+ + +++G G +G V++A ++ TGE VA+K+++ +RE+ L++LNH
Sbjct: 9 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 68
Query: 60 SNIVKLKELIQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQ 119
NIVKL ++I N+LYLVFE + +L + M A P IK++LFQ+ QGL++ H
Sbjct: 69 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 128
Query: 120 NGFFHRDLKPENLLV-SQGIIKIADFGLAREIKSGPP---YTNYVGSRWYRAPEILLQSE 175
+ HRDLKP+NLL+ ++G IK+ADFGLAR G P YT+ V + WYRAPEILL +
Sbjct: 129 HRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVTLWYRAPEILLGCK 186
Query: 176 LYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQARAIK 235
YS+ D+W++G I AE+ T LFPG SE DQ+++I LG+P W G+ K
Sbjct: 187 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP-GVTSMPDYK 245
Query: 236 YQFPQLPRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFFKRCFYAPPHIR 295
FP+ R + S ++P +D SL + +DP+KR +A AL HPFF+ PH+R
Sbjct: 246 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVPHLR 305
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 232 bits (591), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 123/300 (41%), Positives = 182/300 (60%), Gaps = 8/300 (2%)
Query: 1 MDKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELK-QRYASWEDCLNLREVKCLRKLNH 59
M+ + +++G G +G V++A ++ TGE VA+K+++ +RE+ L++LNH
Sbjct: 6 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 65
Query: 60 SNIVKLKELIQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQ 119
NIVKL ++I N+LYLVFE + +L + M A P IK++LFQ+ QGL++ H
Sbjct: 66 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 125
Query: 120 NGFFHRDLKPENLLV-SQGIIKIADFGLAREIKSGPP---YTNYVGSRWYRAPEILLQSE 175
+ HRDLKP+NLL+ ++G IK+ADFGLAR G P YT+ V + WYRAPEILL +
Sbjct: 126 HRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVTLWYRAPEILLGCK 183
Query: 176 LYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQARAIK 235
YS+ D+W++G I AE+ T LFPG SE DQ+++I LG+P W G+ K
Sbjct: 184 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP-GVTSMPDYK 242
Query: 236 YQFPQLPRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFFKRCFYAPPHIR 295
FP+ R + S ++P +D SL + +DP+KR +A AL HPFF+ PH+R
Sbjct: 243 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVPHLR 302
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 232 bits (591), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 123/300 (41%), Positives = 180/300 (60%), Gaps = 8/300 (2%)
Query: 1 MDKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELK-QRYASWEDCLNLREVKCLRKLNH 59
M+ + +++G G +G V++A ++ TGE VA+K+++ +RE+ L++LNH
Sbjct: 5 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 64
Query: 60 SNIVKLKELIQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQ 119
NIVKL ++I N+LYLVFE + +L + M A P IK++LFQ+ QGL++ H
Sbjct: 65 PNIVKLLDVIHTENKLYLVFEFLSMDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 124
Query: 120 NGFFHRDLKPENLLV-SQGIIKIADFGLAREIKSGPPYTNY---VGSRWYRAPEILLQSE 175
+ HRDLKPENLL+ ++G IK+ADFGLAR G P Y V + WYRAPEILL +
Sbjct: 125 HRVLHRDLKPENLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTLWYRAPEILLGCK 182
Query: 176 LYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQARAIK 235
YS+ D+W++G I AE+ T LFPG SE DQ+++I LG+P W G+ K
Sbjct: 183 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP-GVTSMPDYK 241
Query: 236 YQFPQLPRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFFKRCFYAPPHIR 295
FP+ R + S ++P +D SL + +DP+KR +A AL HPFF+ PH+R
Sbjct: 242 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVPHLR 301
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 231 bits (590), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 123/300 (41%), Positives = 180/300 (60%), Gaps = 8/300 (2%)
Query: 1 MDKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELK-QRYASWEDCLNLREVKCLRKLNH 59
M+ + +++G G +G V++A ++ TGE VA+K+++ +RE+ L++LNH
Sbjct: 3 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 62
Query: 60 SNIVKLKELIQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQ 119
NIVKL ++I N+LYLVFE + +L + M A P IK++LFQ+ QGL++ H
Sbjct: 63 PNIVKLLDVIHTENKLYLVFEFLSMDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 122
Query: 120 NGFFHRDLKPENLLV-SQGIIKIADFGLAREIKSGPPYTNY---VGSRWYRAPEILLQSE 175
+ HRDLKPENLL+ ++G IK+ADFGLAR G P Y V + WYRAPEILL +
Sbjct: 123 HRVLHRDLKPENLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTLWYRAPEILLGCK 180
Query: 176 LYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQARAIK 235
YS+ D+W++G I AE+ T LFPG SE DQ+++I LG+P W G+ K
Sbjct: 181 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP-GVTSMPDYK 239
Query: 236 YQFPQLPRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFFKRCFYAPPHIR 295
FP+ R + S ++P +D SL + +DP+KR +A AL HPFF+ PH+R
Sbjct: 240 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVPHLR 299
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 231 bits (589), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 123/300 (41%), Positives = 181/300 (60%), Gaps = 8/300 (2%)
Query: 1 MDKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELK-QRYASWEDCLNLREVKCLRKLNH 59
M+ + +++G G +G V++A ++ TGE VA+K+++ +RE+ L++LNH
Sbjct: 1 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 60
Query: 60 SNIVKLKELIQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQ 119
NIVKL ++I N+LYLVFE + +L M A P IK++LFQ+ QGL++ H
Sbjct: 61 PNIVKLLDVIHTENKLYLVFEHVHQDLKTFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 120
Query: 120 NGFFHRDLKPENLLV-SQGIIKIADFGLAREIKSGPP---YTNYVGSRWYRAPEILLQSE 175
+ HRDLKP+NLL+ ++G IK+ADFGLAR G P YT+ V + WYRAPEILL +
Sbjct: 121 HRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVTLWYRAPEILLGCK 178
Query: 176 LYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQARAIK 235
YS+ D+W++G I AE+ T LFPG SE DQ+++I LG+P W G+ K
Sbjct: 179 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP-GVTSMPDYK 237
Query: 236 YQFPQLPRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFFKRCFYAPPHIR 295
FP+ R + S ++P +D SL + +DP+KR +A AL HPFF+ PH+R
Sbjct: 238 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVPHLR 297
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 231 bits (588), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 123/300 (41%), Positives = 180/300 (60%), Gaps = 8/300 (2%)
Query: 1 MDKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELK-QRYASWEDCLNLREVKCLRKLNH 59
M+ + +++G G +G V++A ++ TGE VA+K+++ +RE+ L++LNH
Sbjct: 3 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 62
Query: 60 SNIVKLKELIQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQ 119
NIVKL ++I N+LYLVFE + +L + M A P IK++LFQ+ QGL++ H
Sbjct: 63 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 122
Query: 120 NGFFHRDLKPENLLV-SQGIIKIADFGLAREIKSGPPYTNY---VGSRWYRAPEILLQSE 175
+ HRDLKPENLL+ ++G IK+ADFGLAR G P Y V + WYRAPEILL +
Sbjct: 123 HRVLHRDLKPENLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTLWYRAPEILLGCK 180
Query: 176 LYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQARAIK 235
YS+ D+W++G I AE+ T LFPG SE DQ+++I LG+P W G+ K
Sbjct: 181 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP-GVTSMPDYK 239
Query: 236 YQFPQLPRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFFKRCFYAPPHIR 295
FP+ R + S ++P +D SL + +DP+KR +A AL HPFF+ PH+R
Sbjct: 240 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVPHLR 299
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 231 bits (588), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 123/300 (41%), Positives = 180/300 (60%), Gaps = 8/300 (2%)
Query: 1 MDKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELK-QRYASWEDCLNLREVKCLRKLNH 59
M+ + +++G G +G V++A ++ TGE VA+K+++ +RE+ L++LNH
Sbjct: 4 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 63
Query: 60 SNIVKLKELIQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQ 119
NIVKL ++I N+LYLVFE + +L + M A P IK++LFQ+ QGL++ H
Sbjct: 64 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 123
Query: 120 NGFFHRDLKPENLLV-SQGIIKIADFGLAREIKSGPPYTNY---VGSRWYRAPEILLQSE 175
+ HRDLKPENLL+ ++G IK+ADFGLAR G P Y V + WYRAPEILL +
Sbjct: 124 HRVLHRDLKPENLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTLWYRAPEILLGCK 181
Query: 176 LYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQARAIK 235
YS+ D+W++G I AE+ T LFPG SE DQ+++I LG+P W G+ K
Sbjct: 182 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP-GVTSMPDYK 240
Query: 236 YQFPQLPRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFFKRCFYAPPHIR 295
FP+ R + S ++P +D SL + +DP+KR +A AL HPFF+ PH+R
Sbjct: 241 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVPHLR 300
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 230 bits (587), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 123/300 (41%), Positives = 179/300 (59%), Gaps = 8/300 (2%)
Query: 1 MDKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELK-QRYASWEDCLNLREVKCLRKLNH 59
M+ + +++G G +G V++A ++ TGE VA+K+++ +RE+ L++LNH
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 60 SNIVKLKELIQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQ 119
NIVKL ++I N+LYLVFE + +L M A P IK++LFQ+ QGL++ H
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFLHQDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 121
Query: 120 NGFFHRDLKPENLLV-SQGIIKIADFGLAREIKSGPPYTNY---VGSRWYRAPEILLQSE 175
+ HRDLKPENLL+ ++G IK+ADFGLAR G P Y V + WYRAPEILL +
Sbjct: 122 HRVLHRDLKPENLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTLWYRAPEILLGCK 179
Query: 176 LYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQARAIK 235
YS+ D+W++G I AE+ T LFPG SE DQ+++I LG+P W G+ K
Sbjct: 180 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP-GVTSMPDYK 238
Query: 236 YQFPQLPRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFFKRCFYAPPHIR 295
FP+ R + S ++P +D SL + +DP+KR +A AL HPFF+ PH+R
Sbjct: 239 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVPHLR 298
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 230 bits (587), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 122/300 (40%), Positives = 181/300 (60%), Gaps = 8/300 (2%)
Query: 1 MDKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELK-QRYASWEDCLNLREVKCLRKLNH 59
M+ + +++G G +G V++A ++ TGE VA+K+++ +RE+ L++LNH
Sbjct: 5 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 64
Query: 60 SNIVKLKELIQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQ 119
NIVKL ++I N+LYLVFE ++ +L + M A P IK++LFQ+ QGL++ H
Sbjct: 65 PNIVKLLDVIHTENKLYLVFEHVDQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 124
Query: 120 NGFFHRDLKPENLLV-SQGIIKIADFGLAREIKSGPPYTNY---VGSRWYRAPEILLQSE 175
+ HRDLKP+NLL+ ++G IK+ADFGLAR G P Y V + WYRAPEILL +
Sbjct: 125 HRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTLWYRAPEILLGCK 182
Query: 176 LYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQARAIK 235
YS+ D+W++G I AE+ T LFPG SE DQ+++I LG+P W G+ K
Sbjct: 183 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP-GVTSMPDYK 241
Query: 236 YQFPQLPRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFFKRCFYAPPHIR 295
FP+ R + S ++P +D SL + +DP+KR +A AL HPFF+ PH+R
Sbjct: 242 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVPHLR 301
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 230 bits (586), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 122/300 (40%), Positives = 179/300 (59%), Gaps = 8/300 (2%)
Query: 1 MDKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELK-QRYASWEDCLNLREVKCLRKLNH 59
M+ + +++G G +G V++A ++ TGE VA+K+++ +RE+ L++LNH
Sbjct: 5 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 64
Query: 60 SNIVKLKELIQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQ 119
NIVKL ++I N+LYLVFE + +L M A P IK++LFQ+ QGL++ H
Sbjct: 65 PNIVKLLDVIHTENKLYLVFEFLSMDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 124
Query: 120 NGFFHRDLKPENLLV-SQGIIKIADFGLAREIKSGPPYTNY---VGSRWYRAPEILLQSE 175
+ HRDLKP+NLL+ ++G IK+ADFGLAR G P Y V + WYRAPEILL +
Sbjct: 125 HRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTLWYRAPEILLGCK 182
Query: 176 LYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQARAIK 235
YS+ D+W++G I AE+ T LFPG SE DQ+++I LG+P W G+ K
Sbjct: 183 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP-GVTSMPDYK 241
Query: 236 YQFPQLPRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFFKRCFYAPPHIR 295
FP+ R + S ++P +D SL + +DP+KR +A AL HPFF+ PH+R
Sbjct: 242 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVPHLR 301
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 230 bits (586), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 122/299 (40%), Positives = 181/299 (60%), Gaps = 8/299 (2%)
Query: 2 DKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELK-QRYASWEDCLNLREVKCLRKLNHS 60
+ + +++G G +G V++A ++ TGE VA+K+++ +RE+ L++LNH
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 61 NIVKLKELIQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQN 120
NIVKL ++I N+LYLVFE + +L + M A P IK++LFQ+ QGL++ H +
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 121
Query: 121 GFFHRDLKPENLLV-SQGIIKIADFGLAREIKSGPP---YTNYVGSRWYRAPEILLQSEL 176
HRDLKP+NLL+ ++G IK+ADFGLAR G P YT+ V + WYRAPEILL +
Sbjct: 122 RVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVTLWYRAPEILLGCKY 179
Query: 177 YSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQARAIKY 236
YS+ D+W++G I AE+ T LFPG SE DQ+++I LG+P W G+ K
Sbjct: 180 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP-GVTSMPDYKP 238
Query: 237 QFPQLPRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFFKRCFYAPPHIR 295
FP+ R + S ++P +D SL + +DP+KR +A AL HPFF+ PH+R
Sbjct: 239 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVPHLR 297
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 230 bits (586), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 122/300 (40%), Positives = 180/300 (60%), Gaps = 8/300 (2%)
Query: 1 MDKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELK-QRYASWEDCLNLREVKCLRKLNH 59
M+ + +++G G +G V++A ++ TGE VA+K+++ +RE+ L++LNH
Sbjct: 3 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 62
Query: 60 SNIVKLKELIQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQ 119
NIVKL ++I N+LYLVFE + +L + M A P IK++LFQ+ QGL++ H
Sbjct: 63 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 122
Query: 120 NGFFHRDLKPENLLV-SQGIIKIADFGLAREIKSGPPYTNY---VGSRWYRAPEILLQSE 175
+ HRDLKP+NLL+ ++G IK+ADFGLAR G P Y V + WYRAPEILL +
Sbjct: 123 HRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTLWYRAPEILLGCK 180
Query: 176 LYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQARAIK 235
YS+ D+W++G I AE+ T LFPG SE DQ+++I LG+P W G+ K
Sbjct: 181 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP-GVTSMPDYK 239
Query: 236 YQFPQLPRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFFKRCFYAPPHIR 295
FP+ R + S ++P +D SL + +DP+KR +A AL HPFF+ PH+R
Sbjct: 240 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVPHLR 299
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 230 bits (586), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 122/300 (40%), Positives = 180/300 (60%), Gaps = 8/300 (2%)
Query: 1 MDKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELK-QRYASWEDCLNLREVKCLRKLNH 59
M+ + +++G G +G V++A ++ TGE VA+K+++ +RE+ L++LNH
Sbjct: 5 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 64
Query: 60 SNIVKLKELIQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQ 119
NIVKL ++I N+LYLVFE + +L + M A P IK++LFQ+ QGL++ H
Sbjct: 65 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 124
Query: 120 NGFFHRDLKPENLLV-SQGIIKIADFGLAREIKSGPPYTNY---VGSRWYRAPEILLQSE 175
+ HRDLKP+NLL+ ++G IK+ADFGLAR G P Y V + WYRAPEILL +
Sbjct: 125 HRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTLWYRAPEILLGCK 182
Query: 176 LYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQARAIK 235
YS+ D+W++G I AE+ T LFPG SE DQ+++I LG+P W G+ K
Sbjct: 183 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP-GVTSMPDYK 241
Query: 236 YQFPQLPRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFFKRCFYAPPHIR 295
FP+ R + S ++P +D SL + +DP+KR +A AL HPFF+ PH+R
Sbjct: 242 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVPHLR 301
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 230 bits (586), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 122/300 (40%), Positives = 180/300 (60%), Gaps = 8/300 (2%)
Query: 1 MDKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELK-QRYASWEDCLNLREVKCLRKLNH 59
M+ + +++G G +G V++A ++ TGE VA+K+++ +RE+ L++LNH
Sbjct: 4 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 63
Query: 60 SNIVKLKELIQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQ 119
NIVKL ++I N+LYLVFE + +L + M A P IK++LFQ+ QGL++ H
Sbjct: 64 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 123
Query: 120 NGFFHRDLKPENLLV-SQGIIKIADFGLAREIKSGPPYTNY---VGSRWYRAPEILLQSE 175
+ HRDLKP+NLL+ ++G IK+ADFGLAR G P Y V + WYRAPEILL +
Sbjct: 124 HRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTLWYRAPEILLGCK 181
Query: 176 LYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQARAIK 235
YS+ D+W++G I AE+ T LFPG SE DQ+++I LG+P W G+ K
Sbjct: 182 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP-GVTSMPDYK 240
Query: 236 YQFPQLPRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFFKRCFYAPPHIR 295
FP+ R + S ++P +D SL + +DP+KR +A AL HPFF+ PH+R
Sbjct: 241 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVPHLR 300
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 230 bits (586), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 122/300 (40%), Positives = 180/300 (60%), Gaps = 8/300 (2%)
Query: 1 MDKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELK-QRYASWEDCLNLREVKCLRKLNH 59
M+ + +++G G +G V++A ++ TGE VA+K+++ +RE+ L++LNH
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 60 SNIVKLKELIQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQ 119
NIVKL ++I N+LYLVFE + +L + M A P IK++LFQ+ QGL++ H
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 121
Query: 120 NGFFHRDLKPENLLV-SQGIIKIADFGLAREIKSGPPYTNY---VGSRWYRAPEILLQSE 175
+ HRDLKP+NLL+ ++G IK+ADFGLAR G P Y V + WYRAPEILL +
Sbjct: 122 HRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTLWYRAPEILLGCK 179
Query: 176 LYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQARAIK 235
YS+ D+W++G I AE+ T LFPG SE DQ+++I LG+P W G+ K
Sbjct: 180 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP-GVTSMPDYK 238
Query: 236 YQFPQLPRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFFKRCFYAPPHIR 295
FP+ R + S ++P +D SL + +DP+KR +A AL HPFF+ PH+R
Sbjct: 239 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVPHLR 298
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 229 bits (585), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 122/300 (40%), Positives = 179/300 (59%), Gaps = 8/300 (2%)
Query: 1 MDKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELK-QRYASWEDCLNLREVKCLRKLNH 59
M+ + +++G G +G V++A ++ TGE VA+K+++ +RE+ L++LNH
Sbjct: 4 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 63
Query: 60 SNIVKLKELIQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQ 119
NIVKL ++I N+LYLVFE + +L M A P IK++LFQ+ QGL++ H
Sbjct: 64 PNIVKLLDVIHTENKLYLVFEFLSMDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 123
Query: 120 NGFFHRDLKPENLLV-SQGIIKIADFGLAREIKSGPPYTNY---VGSRWYRAPEILLQSE 175
+ HRDLKP+NLL+ ++G IK+ADFGLAR G P Y V + WYRAPEILL +
Sbjct: 124 HRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTLWYRAPEILLGCK 181
Query: 176 LYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQARAIK 235
YS+ D+W++G I AE+ T LFPG SE DQ+++I LG+P W G+ K
Sbjct: 182 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP-GVTSMPDYK 240
Query: 236 YQFPQLPRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFFKRCFYAPPHIR 295
FP+ R + S ++P +D SL + +DP+KR +A AL HPFF+ PH+R
Sbjct: 241 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVPHLR 300
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 229 bits (585), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 122/300 (40%), Positives = 180/300 (60%), Gaps = 8/300 (2%)
Query: 1 MDKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELK-QRYASWEDCLNLREVKCLRKLNH 59
M+ + +++G G +G V++A ++ TGE VA+K+++ +RE+ L++LNH
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 60 SNIVKLKELIQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQ 119
NIVKL ++I N+LYLVFE + +L + M A P IK++LFQ+ QGL++ H
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 121
Query: 120 NGFFHRDLKPENLLV-SQGIIKIADFGLAREIKSGPPYTNY---VGSRWYRAPEILLQSE 175
+ HRDLKP+NLL+ ++G IK+ADFGLAR G P Y V + WYRAPEILL +
Sbjct: 122 HRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTLWYRAPEILLGCK 179
Query: 176 LYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQARAIK 235
YS+ D+W++G I AE+ T LFPG SE DQ+++I LG+P W G+ K
Sbjct: 180 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP-GVTSMPDYK 238
Query: 236 YQFPQLPRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFFKRCFYAPPHIR 295
FP+ R + S ++P +D SL + +DP+KR +A AL HPFF+ PH+R
Sbjct: 239 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVPHLR 298
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 229 bits (585), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 122/300 (40%), Positives = 181/300 (60%), Gaps = 8/300 (2%)
Query: 1 MDKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELK-QRYASWEDCLNLREVKCLRKLNH 59
M+ + +++G G +G V++A ++ TGE VA+ +++ +RE+ L++LNH
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 60 SNIVKLKELIQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQ 119
NIVKL ++I N+LYLVFE + +L + M A P IK++LFQ+ QGL++ H
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 121
Query: 120 NGFFHRDLKPENLLV-SQGIIKIADFGLAREIKSGPP---YTNYVGSRWYRAPEILLQSE 175
+ HRDLKP+NLL+ ++G IK+ADFGLAR G P YT+ V + WYRAPEILL +
Sbjct: 122 HRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVTLWYRAPEILLGCK 179
Query: 176 LYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQARAIK 235
YS+ D+W++G I AE+ T LFPG SE DQ+++I LG+P W G+ K
Sbjct: 180 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP-GVTSMPDYK 238
Query: 236 YQFPQLPRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFFKRCFYAPPHIR 295
FP+ R + S ++P +D SL + +DP+KR +A AL HPFF+ PH+R
Sbjct: 239 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVPHLR 298
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 229 bits (585), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 122/300 (40%), Positives = 181/300 (60%), Gaps = 8/300 (2%)
Query: 1 MDKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELK-QRYASWEDCLNLREVKCLRKLNH 59
M+ + +++G G +G V++A ++ TGE VA+ +++ +RE+ L++LNH
Sbjct: 1 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNH 60
Query: 60 SNIVKLKELIQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQ 119
NIVKL ++I N+LYLVFE + +L + M A P IK++LFQ+ QGL++ H
Sbjct: 61 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 120
Query: 120 NGFFHRDLKPENLLV-SQGIIKIADFGLAREIKSGPP---YTNYVGSRWYRAPEILLQSE 175
+ HRDLKP+NLL+ ++G IK+ADFGLAR G P YT+ V + WYRAPEILL +
Sbjct: 121 HRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVTLWYRAPEILLGCK 178
Query: 176 LYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQARAIK 235
YS+ D+W++G I AE+ T LFPG SE DQ+++I LG+P W G+ K
Sbjct: 179 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP-GVTSMPDYK 237
Query: 236 YQFPQLPRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFFKRCFYAPPHIR 295
FP+ R + S ++P +D SL + +DP+KR +A AL HPFF+ PH+R
Sbjct: 238 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVPHLR 297
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 229 bits (585), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 122/300 (40%), Positives = 180/300 (60%), Gaps = 8/300 (2%)
Query: 1 MDKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELK-QRYASWEDCLNLREVKCLRKLNH 59
M+ + +++G G +G V++A ++ TGE VA+K+++ +RE+ L++LNH
Sbjct: 5 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 64
Query: 60 SNIVKLKELIQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQ 119
NIVKL ++I N+LYLVFE + +L + M A P IK++LFQ+ QGL++ H
Sbjct: 65 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 124
Query: 120 NGFFHRDLKPENLLV-SQGIIKIADFGLAREIKSGPPYTNY---VGSRWYRAPEILLQSE 175
+ HRDLKP+NLL+ ++G IK+ADFGLAR G P Y V + WYRAPEILL +
Sbjct: 125 HRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTLWYRAPEILLGCK 182
Query: 176 LYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQARAIK 235
YS+ D+W++G I AE+ T LFPG SE DQ+++I LG+P W G+ K
Sbjct: 183 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP-GVTSMPDYK 241
Query: 236 YQFPQLPRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFFKRCFYAPPHIR 295
FP+ R + S ++P +D SL + +DP+KR +A AL HPFF+ PH+R
Sbjct: 242 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVPHLR 301
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 229 bits (585), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 122/300 (40%), Positives = 180/300 (60%), Gaps = 8/300 (2%)
Query: 1 MDKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELK-QRYASWEDCLNLREVKCLRKLNH 59
M+ + +++G G +G V++A ++ TGE VA+K+++ +RE+ L++LNH
Sbjct: 6 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 65
Query: 60 SNIVKLKELIQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQ 119
NIVKL ++I N+LYLVFE + +L + M A P IK++LFQ+ QGL++ H
Sbjct: 66 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 125
Query: 120 NGFFHRDLKPENLLV-SQGIIKIADFGLAREIKSGPPYTNY---VGSRWYRAPEILLQSE 175
+ HRDLKP+NLL+ ++G IK+ADFGLAR G P Y V + WYRAPEILL +
Sbjct: 126 HRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTLWYRAPEILLGCK 183
Query: 176 LYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQARAIK 235
YS+ D+W++G I AE+ T LFPG SE DQ+++I LG+P W G+ K
Sbjct: 184 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP-GVTSMPDYK 242
Query: 236 YQFPQLPRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFFKRCFYAPPHIR 295
FP+ R + S ++P +D SL + +DP+KR +A AL HPFF+ PH+R
Sbjct: 243 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVPHLR 302
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 229 bits (585), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 122/300 (40%), Positives = 180/300 (60%), Gaps = 8/300 (2%)
Query: 1 MDKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELK-QRYASWEDCLNLREVKCLRKLNH 59
M+ + +++G G +G V++A ++ TGE VA+K+++ +RE+ L++LNH
Sbjct: 4 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 63
Query: 60 SNIVKLKELIQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQ 119
NIVKL ++I N+LYLVFE + +L + M A P IK++LFQ+ QGL++ H
Sbjct: 64 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 123
Query: 120 NGFFHRDLKPENLLV-SQGIIKIADFGLAREIKSGPPYTNY---VGSRWYRAPEILLQSE 175
+ HRDLKP+NLL+ ++G IK+ADFGLAR G P Y V + WYRAPEILL +
Sbjct: 124 HRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTLWYRAPEILLGCK 181
Query: 176 LYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQARAIK 235
YS+ D+W++G I AE+ T LFPG SE DQ+++I LG+P W G+ K
Sbjct: 182 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP-GVTSMPDYK 240
Query: 236 YQFPQLPRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFFKRCFYAPPHIR 295
FP+ R + S ++P +D SL + +DP+KR +A AL HPFF+ PH+R
Sbjct: 241 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVPHLR 300
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 229 bits (585), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 122/300 (40%), Positives = 180/300 (60%), Gaps = 8/300 (2%)
Query: 1 MDKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELK-QRYASWEDCLNLREVKCLRKLNH 59
M+ + +++G G +G V++A ++ TGE VA+K+++ +RE+ L++LNH
Sbjct: 1 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 60
Query: 60 SNIVKLKELIQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQ 119
NIVKL ++I N+LYLVFE + +L + M A P IK++LFQ+ QGL++ H
Sbjct: 61 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 120
Query: 120 NGFFHRDLKPENLLV-SQGIIKIADFGLAREIKSGPPYTNY---VGSRWYRAPEILLQSE 175
+ HRDLKP+NLL+ ++G IK+ADFGLAR G P Y V + WYRAPEILL +
Sbjct: 121 HRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTLWYRAPEILLGCK 178
Query: 176 LYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQARAIK 235
YS+ D+W++G I AE+ T LFPG SE DQ+++I LG+P W G+ K
Sbjct: 179 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP-GVTSMPDYK 237
Query: 236 YQFPQLPRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFFKRCFYAPPHIR 295
FP+ R + S ++P +D SL + +DP+KR +A AL HPFF+ PH+R
Sbjct: 238 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVPHLR 297
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 229 bits (584), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 122/300 (40%), Positives = 179/300 (59%), Gaps = 8/300 (2%)
Query: 1 MDKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELK-QRYASWEDCLNLREVKCLRKLNH 59
M+ + +++G G +G V++A ++ TGE VA+K+++ +RE+ L++LNH
Sbjct: 5 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 64
Query: 60 SNIVKLKELIQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQ 119
NIVKL ++I N+LYLVFE + +L M A P IK++LFQ+ QGL++ H
Sbjct: 65 PNIVKLLDVIHTENKLYLVFEFLHQDLKTFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 124
Query: 120 NGFFHRDLKPENLLV-SQGIIKIADFGLAREIKSGPPYTNY---VGSRWYRAPEILLQSE 175
+ HRDLKP+NLL+ ++G IK+ADFGLAR G P Y V + WYRAPEILL +
Sbjct: 125 HRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTLWYRAPEILLGCK 182
Query: 176 LYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQARAIK 235
YS+ D+W++G I AE+ T LFPG SE DQ+++I LG+P W G+ K
Sbjct: 183 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP-GVTSMPDYK 241
Query: 236 YQFPQLPRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFFKRCFYAPPHIR 295
FP+ R + S ++P +D SL + +DP+KR +A AL HPFF+ PH+R
Sbjct: 242 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVPHLR 301
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 228 bits (580), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 121/299 (40%), Positives = 179/299 (59%), Gaps = 8/299 (2%)
Query: 1 MDKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELK-QRYASWEDCLNLREVKCLRKLNH 59
M+ + +++G G +G V++A ++ TGE VA+K+++ +RE+ L++LNH
Sbjct: 1 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 60
Query: 60 SNIVKLKELIQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQ 119
NIVKL ++I N+LYLVFE + +L + M A P IK++LFQ+ QGL++ H
Sbjct: 61 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 120
Query: 120 NGFFHRDLKPENLLV-SQGIIKIADFGLAREIKSGPPYTNY---VGSRWYRAPEILLQSE 175
+ HRDLKP+NLL+ ++G IK+ADFGLAR G P Y V + WYRAPEILL +
Sbjct: 121 HRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTLWYRAPEILLGCK 178
Query: 176 LYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQARAIK 235
YS+ D+W++G I AE+ T LFPG SE DQ+++I LG+P W G+ K
Sbjct: 179 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP-GVTSMPDYK 237
Query: 236 YQFPQLPRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFFKRCFYAPPHI 294
FP+ R + S ++P +D SL + +DP+KR +A AL HPFF+ PH+
Sbjct: 238 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVPHL 296
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 228 bits (580), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 121/299 (40%), Positives = 179/299 (59%), Gaps = 8/299 (2%)
Query: 1 MDKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELK-QRYASWEDCLNLREVKCLRKLNH 59
M+ + +++G G +G V++A ++ TGE VA+K+++ +RE+ L++LNH
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 60 SNIVKLKELIQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQ 119
NIVKL ++I N+LYLVFE + +L + M A P IK++LFQ+ QGL++ H
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 121
Query: 120 NGFFHRDLKPENLLV-SQGIIKIADFGLAREIKSGPPYTNY---VGSRWYRAPEILLQSE 175
+ HRDLKP+NLL+ ++G IK+ADFGLAR G P Y V + WYRAPEILL +
Sbjct: 122 HRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTLWYRAPEILLGCK 179
Query: 176 LYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQARAIK 235
YS+ D+W++G I AE+ T LFPG SE DQ+++I LG+P W G+ K
Sbjct: 180 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP-GVTSMPDYK 238
Query: 236 YQFPQLPRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFFKRCFYAPPHI 294
FP+ R + S ++P +D SL + +DP+KR +A AL HPFF+ PH+
Sbjct: 239 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVPHL 297
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 227 bits (579), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 121/299 (40%), Positives = 179/299 (59%), Gaps = 8/299 (2%)
Query: 1 MDKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELK-QRYASWEDCLNLREVKCLRKLNH 59
M+ + +++G G +G V++A ++ TGE VA+K+++ +RE+ L++LNH
Sbjct: 3 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 62
Query: 60 SNIVKLKELIQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQ 119
NIVKL ++I N+LYLVFE + +L + M A P IK++LFQ+ QGL++ H
Sbjct: 63 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 122
Query: 120 NGFFHRDLKPENLLV-SQGIIKIADFGLAREIKSGPPYTNY---VGSRWYRAPEILLQSE 175
+ HRDLKP+NLL+ ++G IK+ADFGLAR G P Y V + WYRAPEILL +
Sbjct: 123 HRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTLWYRAPEILLGCK 180
Query: 176 LYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQARAIK 235
YS+ D+W++G I AE+ T LFPG SE DQ+++I LG+P W G+ K
Sbjct: 181 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP-GVTSMPDYK 239
Query: 236 YQFPQLPRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFFKRCFYAPPHI 294
FP+ R + S ++P +D SL + +DP+KR +A AL HPFF+ PH+
Sbjct: 240 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVPHL 298
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 224 bits (570), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 119/290 (41%), Positives = 176/290 (60%), Gaps = 8/290 (2%)
Query: 1 MDKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELK-QRYASWEDCLNLREVKCLRKLNH 59
M+ + +++G G +G V++A ++ TGE VA+K+++ +RE+ L++LNH
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 60 SNIVKLKELIQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQ 119
NIVKL ++I N+LYLVFE + +L + M A P IK++LFQ+ QGL++ H
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 121
Query: 120 NGFFHRDLKPENLLV-SQGIIKIADFGLAREIKSGPPYTNY---VGSRWYRAPEILLQSE 175
+ HRDLKP+NLL+ ++G IK+ADFGLAR G P Y V + WYRAPEILL +
Sbjct: 122 HRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTLWYRAPEILLGCK 179
Query: 176 LYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQARAIK 235
YS+ D+W++G I AE+ T LFPG SE DQ+++I LG+P W G+ K
Sbjct: 180 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP-GVTSMPDYK 238
Query: 236 YQFPQLPRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFFK 285
FP+ R + S ++P +D SL + +DP+KR +A AL HPFF+
Sbjct: 239 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 288
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 200 bits (508), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 110/293 (37%), Positives = 176/293 (60%), Gaps = 15/293 (5%)
Query: 1 MDKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWED----CLNLREVKCLRK 56
M+KY +++G G +G V++A D G VA+K ++ ED +RE+ L++
Sbjct: 20 MEKYQKLEKVGEGTYGVVYKAKDSQ-GRIVALKRIR---LDAEDEGIPSTAIREISLLKE 75
Query: 57 LNHSNIVKLKELIQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSY 116
L+H NIV L ++I + L LVFE ME +L +++ L + +IK +L+Q+ +G+++
Sbjct: 76 LHHPNIVSLIDVIHSERCLTLVFEFMEKDLKKVLDENKTGL-QDSQIKIYLYQLLRGVAH 134
Query: 117 MHQNGFFHRDLKPENLLV-SQGIIKIADFGLAREIKSGPP---YTNYVGSRWYRAPEILL 172
HQ+ HRDLKP+NLL+ S G +K+ADFGLAR G P YT+ V + WYRAP++L+
Sbjct: 135 CHQHRILHRDLKPQNLLINSDGALKLADFGLARAF--GIPVRSYTHEVVTLWYRAPDVLM 192
Query: 173 QSELYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQAR 232
S+ YS+ D+W++G I AE+ T PLFPG ++ DQ+ KI +LG+P W
Sbjct: 193 GSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQELPL 252
Query: 233 AIKYQFPQLPRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFFK 285
+ F + S+++P Q+ I L ++ +DP+KR +A +A+ HP+FK
Sbjct: 253 WKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNHPYFK 305
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 200 bits (508), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 110/293 (37%), Positives = 176/293 (60%), Gaps = 15/293 (5%)
Query: 1 MDKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWED----CLNLREVKCLRK 56
M+KY +++G G +G V++A D G VA+K ++ ED +RE+ L++
Sbjct: 20 MEKYQKLEKVGEGTYGVVYKAKDSQ-GRIVALKRIR---LDAEDEGIPSTAIREISLLKE 75
Query: 57 LNHSNIVKLKELIQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSY 116
L+H NIV L ++I + L LVFE ME +L +++ L + +IK +L+Q+ +G+++
Sbjct: 76 LHHPNIVSLIDVIHSERCLTLVFEFMEKDLKKVLDENKTGL-QDSQIKIYLYQLLRGVAH 134
Query: 117 MHQNGFFHRDLKPENLLV-SQGIIKIADFGLAREIKSGPP---YTNYVGSRWYRAPEILL 172
HQ+ HRDLKP+NLL+ S G +K+ADFGLAR G P YT+ V + WYRAP++L+
Sbjct: 135 CHQHRILHRDLKPQNLLINSDGALKLADFGLARAF--GIPVRSYTHEVVTLWYRAPDVLM 192
Query: 173 QSELYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQAR 232
S+ YS+ D+W++G I AE+ T PLFPG ++ DQ+ KI +LG+P W
Sbjct: 193 GSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQELPL 252
Query: 233 AIKYQFPQLPRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFFK 285
+ F + S+++P Q+ I L ++ +DP+KR +A +A+ HP+FK
Sbjct: 253 WKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNHPYFK 305
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 198 bits (504), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 111/290 (38%), Positives = 171/290 (58%), Gaps = 13/290 (4%)
Query: 3 KYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYAS-WEDCLN---LREVKCLRKLN 58
+Y LG G F V++A D++T + VAIK++K + S +D +N LRE+K L++L+
Sbjct: 11 RYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELS 70
Query: 59 HSNIVKLKELIQNNNRLYLVFECMECNLYQLMAARDRKLFSEP-EIKAWLFQVFQGLSYM 117
H NI+ L + + + + LVF+ ME +L ++ +D L P IKA++ QGL Y+
Sbjct: 71 HPNIIGLLDAFGHKSNISLVFDFMETDLEVII--KDNSLVLTPSHIKAYMLMTLQGLEYL 128
Query: 118 HQNGFFHRDLKPENLLVSQ-GIIKIADFGLAREIKS-GPPYTNYVGSRWYRAPEILLQSE 175
HQ+ HRDLKP NLL+ + G++K+ADFGLA+ S Y + V +RWYRAPE+L +
Sbjct: 129 HQHWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYXHQVVTRWYRAPELLFGAR 188
Query: 176 LYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQARAIK 235
+Y DMWA+G I+AEL P PG S+ DQ+ +I LG+PT + W D +
Sbjct: 189 MYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPDYVT 248
Query: 236 YQ-FPQLPRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFF 284
++ FP +P L + +A D + L + L ++P R TA +AL+ +F
Sbjct: 249 FKSFPGIP---LHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKMKYF 295
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 197 bits (500), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 106/287 (36%), Positives = 163/287 (56%), Gaps = 5/287 (1%)
Query: 1 MDKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLNLREVKCLRKLNHS 60
M+ Y +LG G + V++ + T VA+KE++ + C +REV L+ L H+
Sbjct: 1 METYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHA 60
Query: 61 NIVKLKELIQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQN 120
NIV L ++I L LVFE ++ +L Q + + + +K +LFQ+ +GL+Y H+
Sbjct: 61 NIVTLHDIIHTEKSLTLVFEYLDKDLKQYLDDCG-NIINMHNVKLFLFQLLRGLAYCHRQ 119
Query: 121 GFFHRDLKPENLLVSQ-GIIKIADFGLAREIKSGPP--YTNYVGSRWYRAPEILLQSELY 177
HRDLKP+NLL+++ G +K+ADFGLAR KS P Y N V + WYR P+ILL S Y
Sbjct: 120 KVLHRDLKPQNLLINERGELKLADFGLARA-KSIPTKTYDNEVVTLWYRPPDILLGSTDY 178
Query: 178 SSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQARAIKYQ 237
S++ DMW +G I E+ T PLFPG++ +Q++ I +LG+PT ++W L Y
Sbjct: 179 STQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEFKTYN 238
Query: 238 FPQLPRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFF 284
+P+ L + P D L L ++ R +A +A++HPFF
Sbjct: 239 YPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMKHPFF 285
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 197 bits (500), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 108/290 (37%), Positives = 173/290 (59%), Gaps = 10/290 (3%)
Query: 1 MDKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELK-QRYASWEDCLNLREVKCLRKLNH 59
M+KY G +++G G +G V++A + + GE A+K+++ ++ +RE+ L++L H
Sbjct: 1 MEKYHGLEKIGEGTYGVVYKAQNNY-GETFALKKIRLEKEDEGIPSTTIREISILKELKH 59
Query: 60 SNIVKLKELIQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQ 119
SNIVKL ++I RL LVFE ++ +L +L+ + L S K++L Q+ G++Y H
Sbjct: 60 SNIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTA-KSFLLQLLNGIAYCHD 118
Query: 120 NGFFHRDLKPENLLVS-QGIIKIADFGLAREIKSGPP---YTNYVGSRWYRAPEILLQSE 175
HRDLKP+NLL++ +G +KIADFGLAR G P YT+ V + WYRAP++L+ S+
Sbjct: 119 RRVLHRDLKPQNLLINREGELKIADFGLARAF--GIPVRKYTHEVVTLWYRAPDVLMGSK 176
Query: 176 LYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQARAIK 235
YS+ D+W++G I AE+ PLFPG SEADQ+ +I +LG+P +W + + +
Sbjct: 177 KYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPN-VTELPKYD 235
Query: 236 YQFPQLPRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFFK 285
F + + + I L + DP++R TA +AL+H +FK
Sbjct: 236 PNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFK 285
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 196 bits (499), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 108/290 (37%), Positives = 173/290 (59%), Gaps = 10/290 (3%)
Query: 1 MDKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELK-QRYASWEDCLNLREVKCLRKLNH 59
M+KY G +++G G +G V++A + + GE A+K+++ ++ +RE+ L++L H
Sbjct: 1 MEKYHGLEKIGEGTYGVVYKAQNNY-GETFALKKIRLEKEDEGIPSTTIREISILKELKH 59
Query: 60 SNIVKLKELIQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQ 119
SNIVKL ++I RL LVFE ++ +L +L+ + L S K++L Q+ G++Y H
Sbjct: 60 SNIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTA-KSFLLQLLNGIAYCHD 118
Query: 120 NGFFHRDLKPENLLVS-QGIIKIADFGLAREIKSGPP---YTNYVGSRWYRAPEILLQSE 175
HRDLKP+NLL++ +G +KIADFGLAR G P YT+ V + WYRAP++L+ S+
Sbjct: 119 RRVLHRDLKPQNLLINREGELKIADFGLARAF--GIPVRKYTHEVVTLWYRAPDVLMGSK 176
Query: 176 LYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQARAIK 235
YS+ D+W++G I AE+ PLFPG SEADQ+ +I +LG+P +W + + +
Sbjct: 177 KYSTTIDIWSVGCIFAEMVNGAPLFPGVSEADQLMRIFRILGTPNSKNWPN-VTELPKYD 235
Query: 236 YQFPQLPRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFFK 285
F + + + I L + DP++R TA +AL+H +FK
Sbjct: 236 PNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFK 285
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 196 bits (499), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 107/290 (36%), Positives = 173/290 (59%), Gaps = 10/290 (3%)
Query: 1 MDKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELK-QRYASWEDCLNLREVKCLRKLNH 59
M+KY G +++G G +G V++A + + GE A+K+++ ++ +RE+ L++L H
Sbjct: 1 MEKYHGLEKIGEGTYGVVYKAQNNY-GETFALKKIRLEKEDEGIPSTTIREISILKELKH 59
Query: 60 SNIVKLKELIQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQ 119
SNIVKL ++I RL LVFE ++ +L +L+ + L S K++L Q+ G++Y H
Sbjct: 60 SNIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTA-KSFLLQLLNGIAYCHD 118
Query: 120 NGFFHRDLKPENLLVS-QGIIKIADFGLAREIKSGPP---YTNYVGSRWYRAPEILLQSE 175
HRDLKP+NLL++ +G +KIADFGLAR G P YT+ + + WYRAP++L+ S+
Sbjct: 119 RRVLHRDLKPQNLLINREGELKIADFGLARAF--GIPVRKYTHEIVTLWYRAPDVLMGSK 176
Query: 176 LYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQARAIK 235
YS+ D+W++G I AE+ PLFPG SEADQ+ +I +LG+P +W + + +
Sbjct: 177 KYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPN-VTELPKYD 235
Query: 236 YQFPQLPRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFFK 285
F + + + I L + DP++R TA +AL+H +FK
Sbjct: 236 PNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFK 285
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 191 bits (485), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 113/304 (37%), Positives = 170/304 (55%), Gaps = 20/304 (6%)
Query: 1 MDKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCL---NLREVKCLRKL 57
+D+Y +LG G +G V++A D T E VAIK ++ + E+ + +REV L++L
Sbjct: 33 IDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHE--EEGVPGTAIREVSLLKEL 90
Query: 58 NHSNIVKLKELIQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYM 117
H NI++LK +I +N+RL+L+FE E +L + M S IK++L+Q+ G+++
Sbjct: 91 QHRNIIELKSVIHHNHRLHLIFEYAENDLKKYMDKNPD--VSMRVIKSFLYQLINGVNFC 148
Query: 118 HQNGFFHRDLKPENLLVSQG------IIKIADFGLAREIKSGPP---YTNYVGSRWYRAP 168
H HRDLKP+NLL+S ++KI DFGLAR G P +T+ + + WYR P
Sbjct: 149 HSRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAF--GIPIRQFTHEIITLWYRPP 206
Query: 169 EILLQSELYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGL 228
EILL S YS+ D+W++ I AE+ PLFPG SE DQ++KI VLG P +W G+
Sbjct: 207 EILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLFKIFEVLGLPDDTTWP-GV 265
Query: 229 RQARAIKYQFPQLPRANLSALMPSASQDAISLFES-LCSWDPSKRPTAAEALQHPFFKRC 287
K FP+ L ++ + D + + DP KR +A AL+HP+F
Sbjct: 266 TALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALEHPYFSHN 325
Query: 288 FYAP 291
+ P
Sbjct: 326 DFDP 329
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 187 bits (476), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 104/295 (35%), Positives = 163/295 (55%), Gaps = 22/295 (7%)
Query: 10 LGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLNLREVKCLRKLNHSNIVKLKEL- 68
LG GA+G V A + TGE VAIK+++ LRE+K L+ H NI+ + +
Sbjct: 19 LGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQ 78
Query: 69 ----IQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQNGFFH 124
+N N +Y++ E M+ +L+++++ ++ S+ I+ +++Q + + +H + H
Sbjct: 79 RPDSFENFNEVYIIQELMQTDLHRVIST---QMLSDDHIQYFIYQTLRAVKVLHGSNVIH 135
Query: 125 RDLKPENLLVSQGI-IKIADFGLAREI------KSGPP-----YTNYVGSRWYRAPEILL 172
RDLKP NLL++ +K+ DFGLAR I S P T YV +RWYRAPE++L
Sbjct: 136 RDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEYVATRWYRAPEVML 195
Query: 173 QSELYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQAR 232
S YS D+W+ G I+AELF P+FPG Q+ I G++G+P D+ + R
Sbjct: 196 TSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSDNDLRCIESPR 255
Query: 233 AIKY--QFPQLPRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFFK 285
A +Y P P A L + P + I L + + +DP+KR TA EAL+HP+ +
Sbjct: 256 AREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEHPYLQ 310
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 186 bits (471), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 105/304 (34%), Positives = 164/304 (53%), Gaps = 23/304 (7%)
Query: 3 KYSGFKELGRGAFGRVFQAFDEHTGEAVAIKEL----KQRYASWEDCLNLREVKCLRKLN 58
+Y+ +G GA+G V A+D VAIK++ Q Y LRE+K L
Sbjct: 26 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQR----TLREIKILLAFR 81
Query: 59 HSNIVKLKELI-----QNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQG 113
H NI+ + ++I + +Y+V + ME +LY+L+ + S I +L+Q+ +G
Sbjct: 82 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH---LSNDHICYFLYQILRG 138
Query: 114 LSYMHQNGFFHRDLKPENLLV-SQGIIKIADFGLAREIKSGPPYT----NYVGSRWYRAP 168
L Y+H HRDLKP NLL+ + +KI DFGLAR +T YV +RWYRAP
Sbjct: 139 LKYIHSANVLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 198
Query: 169 EILLQSELYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGL 228
EI+L S+ Y+ D+W++G I+AE+ + P+FPG DQ+ I G+LGSP+ + G+
Sbjct: 199 EIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCGI 258
Query: 229 R-QARAIKYQFPQLPRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFFKRC 287
+AR P + + L P+A A+ L + + +++P KR +AL HP+ +
Sbjct: 259 NLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLAQ- 317
Query: 288 FYAP 291
+Y P
Sbjct: 318 YYDP 321
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 185 bits (469), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 111/292 (38%), Positives = 160/292 (54%), Gaps = 17/292 (5%)
Query: 4 YSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLN-LREVKCLRKLNHSNI 62
Y +G GA+G V A D+ +GE VAIK+L + + S RE+ L+ + H N+
Sbjct: 26 YVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENV 85
Query: 63 VKLKEL------IQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSY 116
+ L ++ ++N YLV M+ +L ++M + FSE +I+ ++Q+ +GL Y
Sbjct: 86 IGLLDVFTPASSLRNFYDFYLVMPFMQTDLQKIMGLK----FSEEKIQYLVYQMLKGLKY 141
Query: 117 MHQNGFFHRDLKPENLLVSQGI-IKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQSE 175
+H G HRDLKP NL V++ +KI DFGLAR + T YV +RWYRAPE++L
Sbjct: 142 IHSAGVVHRDLKPGNLAVNEDCELKILDFGLARH--ADAEMTGYVVTRWYRAPEVILSWM 199
Query: 176 LYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQARAIK 235
Y+ D+W++G IMAE+ T LF G DQ+ +I V G P + + L A
Sbjct: 200 HYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTE-FVQKLNDKAAKS 258
Query: 236 Y--QFPQLPRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFFK 285
Y PQ PR + + L P AS A L E + D KR TAA+AL HPFF+
Sbjct: 259 YIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTHPFFE 310
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 185 bits (469), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 102/300 (34%), Positives = 163/300 (54%), Gaps = 15/300 (5%)
Query: 3 KYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLNLREVKCLRKLNHSNI 62
+Y+ +G GA+G V A+D VAIK++ LRE+K L + H NI
Sbjct: 24 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 83
Query: 63 VKLKELI-----QNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYM 117
+ + ++I + +Y+V + ME +LY+L+ + S I +L+Q+ +GL Y+
Sbjct: 84 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH---LSNDHICYFLYQILRGLKYI 140
Query: 118 HQNGFFHRDLKPENLLVSQGI-IKIADFGLAREIKSGPPYT----NYVGSRWYRAPEILL 172
H HRDLKP NLL++ +KI DFGLAR +T YV +RWYRAPEI+L
Sbjct: 141 HSANVLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 200
Query: 173 QSELYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLR-QA 231
S+ Y+ D+W++G I+AE+ + P+FPG DQ+ I G+LGSP+ + + +A
Sbjct: 201 NSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNXIINLKA 260
Query: 232 RAIKYQFPQLPRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFFKRCFYAP 291
R P + + L P+A A+ L + + +++P KR +AL HP+ ++ +Y P
Sbjct: 261 RNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQ-YYDP 319
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 185 bits (469), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 104/304 (34%), Positives = 165/304 (54%), Gaps = 23/304 (7%)
Query: 3 KYSGFKELGRGAFGRVFQAFDEHTGEAVAIKEL----KQRYASWEDCLNLREVKCLRKLN 58
+Y+ +G GA+G V A+D VAIK++ Q Y LRE+K L +
Sbjct: 24 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQR----TLREIKILLRFR 79
Query: 59 HSNIVKLKELI-----QNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQG 113
H NI+ + ++I + +Y+V + ME +LY+L+ + S I +L+Q+ +G
Sbjct: 80 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH---LSNDHICYFLYQILRG 136
Query: 114 LSYMHQNGFFHRDLKPENLLVSQGI-IKIADFGLAREIKSGPPYT----NYVGSRWYRAP 168
L Y+H HRDLKP NLL++ +KI DFGLAR +T YV +RWYRAP
Sbjct: 137 LKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 196
Query: 169 EILLQSELYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGL 228
EI+L S+ Y+ D+W++G I+AE+ + P+FPG DQ+ I G+LGSP+ + +
Sbjct: 197 EIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNXII 256
Query: 229 R-QARAIKYQFPQLPRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFFKRC 287
+AR P + + L P+A A+ L + + +++P KR +AL HP+ ++
Sbjct: 257 NLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQ- 315
Query: 288 FYAP 291
+Y P
Sbjct: 316 YYDP 319
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 185 bits (469), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 102/300 (34%), Positives = 163/300 (54%), Gaps = 15/300 (5%)
Query: 3 KYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLNLREVKCLRKLNHSNI 62
+Y+ +G GA+G V A+D VAIK++ LRE+K L + H NI
Sbjct: 28 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYXQRTLREIKILLRFRHENI 87
Query: 63 VKLKELI-----QNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYM 117
+ + ++I + +Y+V + ME +LY+L+ + S I +L+Q+ +GL Y+
Sbjct: 88 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH---LSNDHICYFLYQILRGLKYI 144
Query: 118 HQNGFFHRDLKPENLLVSQGI-IKIADFGLAREIKSGPPYT----NYVGSRWYRAPEILL 172
H HRDLKP NLL++ +KI DFGLAR +T YV +RWYRAPEI+L
Sbjct: 145 HSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 204
Query: 173 QSELYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLR-QA 231
S+ Y+ D+W++G I+AE+ + P+FPG DQ+ I G+LGSP+ + + +A
Sbjct: 205 NSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKA 264
Query: 232 RAIKYQFPQLPRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFFKRCFYAP 291
R P + + L P+A A+ L + + +++P KR +AL HP+ ++ +Y P
Sbjct: 265 RNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQ-YYDP 323
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 184 bits (468), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 111/292 (38%), Positives = 159/292 (54%), Gaps = 17/292 (5%)
Query: 4 YSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLN-LREVKCLRKLNHSNI 62
Y +G GA+G V A D+ +GE VAIK+L + + S RE+ L+ + H N+
Sbjct: 44 YVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENV 103
Query: 63 VKLKEL------IQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSY 116
+ L ++ ++N YLV M+ +L ++M FSE +I+ ++Q+ +GL Y
Sbjct: 104 IGLLDVFTPASSLRNFYDFYLVMPFMQTDLQKIMGME----FSEEKIQYLVYQMLKGLKY 159
Query: 117 MHQNGFFHRDLKPENLLVSQGI-IKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQSE 175
+H G HRDLKP NL V++ +KI DFGLAR + T YV +RWYRAPE++L
Sbjct: 160 IHSAGVVHRDLKPGNLAVNEDCELKILDFGLARH--ADAEMTGYVVTRWYRAPEVILSWM 217
Query: 176 LYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQARAIK 235
Y+ D+W++G IMAE+ T LF G DQ+ +I V G P + + L A
Sbjct: 218 HYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTE-FVQKLNDKAAKS 276
Query: 236 Y--QFPQLPRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFFK 285
Y PQ PR + + L P AS A L E + D KR TAA+AL HPFF+
Sbjct: 277 YIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTHPFFE 328
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 184 bits (467), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 103/295 (34%), Positives = 162/295 (54%), Gaps = 22/295 (7%)
Query: 10 LGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLNLREVKCLRKLNHSNIVKLKEL- 68
LG GA+G V A + TGE VAIK+++ LRE+K L+ H NI+ + +
Sbjct: 19 LGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQ 78
Query: 69 ----IQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQNGFFH 124
+N N +Y++ E M+ +L+++++ ++ S+ I+ +++Q + + +H + H
Sbjct: 79 RPDSFENFNEVYIIQELMQTDLHRVIST---QMLSDDHIQYFIYQTLRAVKVLHGSNVIH 135
Query: 125 RDLKPENLLVSQGI-IKIADFGLAREI------KSGPP-----YTNYVGSRWYRAPEILL 172
RDLKP NLL++ +K+ DFGLAR I S P T V +RWYRAPE++L
Sbjct: 136 RDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEXVATRWYRAPEVML 195
Query: 173 QSELYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQAR 232
S YS D+W+ G I+AELF P+FPG Q+ I G++G+P D+ + R
Sbjct: 196 TSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSDNDLRCIESPR 255
Query: 233 AIKY--QFPQLPRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFFK 285
A +Y P P A L + P + I L + + +DP+KR TA EAL+HP+ +
Sbjct: 256 AREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEHPYLQ 310
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 184 bits (467), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 102/295 (34%), Positives = 162/295 (54%), Gaps = 22/295 (7%)
Query: 10 LGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLNLREVKCLRKLNHSNIVKLKEL- 68
LG GA+G V A + TGE VAIK+++ LRE+K L+ H NI+ + +
Sbjct: 19 LGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQ 78
Query: 69 ----IQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQNGFFH 124
+N N +Y++ E M+ +L+++++ ++ S+ I+ +++Q + + +H + H
Sbjct: 79 RPDSFENFNEVYIIQELMQTDLHRVIST---QMLSDDHIQYFIYQTLRAVKVLHGSNVIH 135
Query: 125 RDLKPENLLVSQGI-IKIADFGLAREI------KSGPP-----YTNYVGSRWYRAPEILL 172
RDLKP NLL++ +K+ DFGLAR I S P +V +RWYRAPE++L
Sbjct: 136 RDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMVEFVATRWYRAPEVML 195
Query: 173 QSELYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQAR 232
S YS D+W+ G I+AELF P+FPG Q+ I G++G+P D+ + R
Sbjct: 196 TSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSDNDLRCIESPR 255
Query: 233 AIKY--QFPQLPRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFFK 285
A +Y P P A L + P + I L + + +DP+KR TA EAL+HP+ +
Sbjct: 256 AREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEHPYLQ 310
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 184 bits (467), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 104/304 (34%), Positives = 165/304 (54%), Gaps = 23/304 (7%)
Query: 3 KYSGFKELGRGAFGRVFQAFDEHTGEAVAIKEL----KQRYASWEDCLNLREVKCLRKLN 58
+Y+ +G GA+G V A+D VAIK++ Q Y LRE+K L +
Sbjct: 32 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQR----TLREIKILLRFR 87
Query: 59 HSNIVKLKELI-----QNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQG 113
H NI+ + ++I + +Y+V + ME +LY+L+ + S I +L+Q+ +G
Sbjct: 88 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH---LSNDHICYFLYQILRG 144
Query: 114 LSYMHQNGFFHRDLKPENLLVSQGI-IKIADFGLAREIKSGPPYT----NYVGSRWYRAP 168
L Y+H HRDLKP NLL++ +KI DFGLAR +T YV +RWYRAP
Sbjct: 145 LKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 204
Query: 169 EILLQSELYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGL 228
EI+L S+ Y+ D+W++G I+AE+ + P+FPG DQ+ I G+LGSP+ + +
Sbjct: 205 EIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCII 264
Query: 229 R-QARAIKYQFPQLPRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFFKRC 287
+AR P + + L P+A A+ L + + +++P KR +AL HP+ ++
Sbjct: 265 NLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQ- 323
Query: 288 FYAP 291
+Y P
Sbjct: 324 YYDP 327
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 184 bits (467), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 104/304 (34%), Positives = 165/304 (54%), Gaps = 23/304 (7%)
Query: 3 KYSGFKELGRGAFGRVFQAFDEHTGEAVAIKEL----KQRYASWEDCLNLREVKCLRKLN 58
+Y+ +G GA+G V A+D VAIK++ Q Y LRE+K L +
Sbjct: 24 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQR----TLREIKILLRFR 79
Query: 59 HSNIVKLKELI-----QNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQG 113
H NI+ + ++I + +Y+V + ME +LY+L+ + S I +L+Q+ +G
Sbjct: 80 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH---LSNDHICYFLYQILRG 136
Query: 114 LSYMHQNGFFHRDLKPENLLVSQGI-IKIADFGLAREIKSGPPYT----NYVGSRWYRAP 168
L Y+H HRDLKP NLL++ +KI DFGLAR +T YV +RWYRAP
Sbjct: 137 LKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 196
Query: 169 EILLQSELYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGL 228
EI+L S+ Y+ D+W++G I+AE+ + P+FPG DQ+ I G+LGSP+ + +
Sbjct: 197 EIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCII 256
Query: 229 R-QARAIKYQFPQLPRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFFKRC 287
+AR P + + L P+A A+ L + + +++P KR +AL HP+ ++
Sbjct: 257 NLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQ- 315
Query: 288 FYAP 291
+Y P
Sbjct: 316 YYDP 319
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 184 bits (466), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 104/304 (34%), Positives = 165/304 (54%), Gaps = 23/304 (7%)
Query: 3 KYSGFKELGRGAFGRVFQAFDEHTGEAVAIKEL----KQRYASWEDCLNLREVKCLRKLN 58
+Y+ +G GA+G V A+D VAIK++ Q Y LRE+K L +
Sbjct: 24 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQR----TLREIKILLRFR 79
Query: 59 HSNIVKLKELI-----QNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQG 113
H NI+ + ++I + +Y+V + ME +LY+L+ + S I +L+Q+ +G
Sbjct: 80 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH---LSNDHICYFLYQILRG 136
Query: 114 LSYMHQNGFFHRDLKPENLLVSQGI-IKIADFGLAREIKSGPPYT----NYVGSRWYRAP 168
L Y+H HRDLKP NLL++ +KI DFGLAR +T YV +RWYRAP
Sbjct: 137 LKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 196
Query: 169 EILLQSELYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGL 228
EI+L S+ Y+ D+W++G I+AE+ + P+FPG DQ+ I G+LGSP+ + +
Sbjct: 197 EIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCII 256
Query: 229 R-QARAIKYQFPQLPRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFFKRC 287
+AR P + + L P+A A+ L + + +++P KR +AL HP+ ++
Sbjct: 257 NLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQ- 315
Query: 288 FYAP 291
+Y P
Sbjct: 316 YYDP 319
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 184 bits (466), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 104/304 (34%), Positives = 165/304 (54%), Gaps = 23/304 (7%)
Query: 3 KYSGFKELGRGAFGRVFQAFDEHTGEAVAIKEL----KQRYASWEDCLNLREVKCLRKLN 58
+Y+ +G GA+G V A+D VAIK++ Q Y LRE+K L +
Sbjct: 28 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQR----TLREIKILLRFR 83
Query: 59 HSNIVKLKELI-----QNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQG 113
H NI+ + ++I + +Y+V + ME +LY+L+ + S I +L+Q+ +G
Sbjct: 84 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH---LSNDHICYFLYQILRG 140
Query: 114 LSYMHQNGFFHRDLKPENLLVSQGI-IKIADFGLAREIKSGPPYT----NYVGSRWYRAP 168
L Y+H HRDLKP NLL++ +KI DFGLAR +T YV +RWYRAP
Sbjct: 141 LKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 200
Query: 169 EILLQSELYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGL 228
EI+L S+ Y+ D+W++G I+AE+ + P+FPG DQ+ I G+LGSP+ + +
Sbjct: 201 EIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCII 260
Query: 229 R-QARAIKYQFPQLPRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFFKRC 287
+AR P + + L P+A A+ L + + +++P KR +AL HP+ ++
Sbjct: 261 NLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQ- 319
Query: 288 FYAP 291
+Y P
Sbjct: 320 YYDP 323
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 184 bits (466), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 104/304 (34%), Positives = 165/304 (54%), Gaps = 23/304 (7%)
Query: 3 KYSGFKELGRGAFGRVFQAFDEHTGEAVAIKEL----KQRYASWEDCLNLREVKCLRKLN 58
+Y+ +G GA+G V A+D VAIK++ Q Y LRE+K L +
Sbjct: 22 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQR----TLREIKILLRFR 77
Query: 59 HSNIVKLKELI-----QNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQG 113
H NI+ + ++I + +Y+V + ME +LY+L+ + S I +L+Q+ +G
Sbjct: 78 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH---LSNDHICYFLYQILRG 134
Query: 114 LSYMHQNGFFHRDLKPENLLVSQGI-IKIADFGLAREIKSGPPYT----NYVGSRWYRAP 168
L Y+H HRDLKP NLL++ +KI DFGLAR +T YV +RWYRAP
Sbjct: 135 LKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 194
Query: 169 EILLQSELYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGL 228
EI+L S+ Y+ D+W++G I+AE+ + P+FPG DQ+ I G+LGSP+ + +
Sbjct: 195 EIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCII 254
Query: 229 R-QARAIKYQFPQLPRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFFKRC 287
+AR P + + L P+A A+ L + + +++P KR +AL HP+ ++
Sbjct: 255 NLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQ- 313
Query: 288 FYAP 291
+Y P
Sbjct: 314 YYDP 317
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 184 bits (466), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 104/304 (34%), Positives = 165/304 (54%), Gaps = 23/304 (7%)
Query: 3 KYSGFKELGRGAFGRVFQAFDEHTGEAVAIKEL----KQRYASWEDCLNLREVKCLRKLN 58
+Y+ +G GA+G V A+D VAIK++ Q Y LRE+K L +
Sbjct: 24 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQR----TLREIKILLRFR 79
Query: 59 HSNIVKLKELI-----QNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQG 113
H NI+ + ++I + +Y+V + ME +LY+L+ + S I +L+Q+ +G
Sbjct: 80 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH---LSNDHICYFLYQILRG 136
Query: 114 LSYMHQNGFFHRDLKPENLLVSQGI-IKIADFGLAREIKSGPPYT----NYVGSRWYRAP 168
L Y+H HRDLKP NLL++ +KI DFGLAR +T YV +RWYRAP
Sbjct: 137 LKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 196
Query: 169 EILLQSELYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGL 228
EI+L S+ Y+ D+W++G I+AE+ + P+FPG DQ+ I G+LGSP+ + +
Sbjct: 197 EIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCII 256
Query: 229 R-QARAIKYQFPQLPRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFFKRC 287
+AR P + + L P+A A+ L + + +++P KR +AL HP+ ++
Sbjct: 257 NLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQ- 315
Query: 288 FYAP 291
+Y P
Sbjct: 316 YYDP 319
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 184 bits (466), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 104/304 (34%), Positives = 165/304 (54%), Gaps = 23/304 (7%)
Query: 3 KYSGFKELGRGAFGRVFQAFDEHTGEAVAIKEL----KQRYASWEDCLNLREVKCLRKLN 58
+Y+ +G GA+G V A+D VAIK++ Q Y LRE+K L +
Sbjct: 29 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQR----TLREIKILLRFR 84
Query: 59 HSNIVKLKELI-----QNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQG 113
H NI+ + ++I + +Y+V + ME +LY+L+ + S I +L+Q+ +G
Sbjct: 85 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH---LSNDHICYFLYQILRG 141
Query: 114 LSYMHQNGFFHRDLKPENLLVSQGI-IKIADFGLAREIKSGPPYT----NYVGSRWYRAP 168
L Y+H HRDLKP NLL++ +KI DFGLAR +T YV +RWYRAP
Sbjct: 142 LKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 201
Query: 169 EILLQSELYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGL 228
EI+L S+ Y+ D+W++G I+AE+ + P+FPG DQ+ I G+LGSP+ + +
Sbjct: 202 EIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCII 261
Query: 229 R-QARAIKYQFPQLPRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFFKRC 287
+AR P + + L P+A A+ L + + +++P KR +AL HP+ ++
Sbjct: 262 NLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQ- 320
Query: 288 FYAP 291
+Y P
Sbjct: 321 YYDP 324
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 184 bits (466), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 104/304 (34%), Positives = 165/304 (54%), Gaps = 23/304 (7%)
Query: 3 KYSGFKELGRGAFGRVFQAFDEHTGEAVAIKEL----KQRYASWEDCLNLREVKCLRKLN 58
+Y+ +G GA+G V A+D VAIK++ Q Y LRE+K L +
Sbjct: 30 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQR----TLREIKILLRFR 85
Query: 59 HSNIVKLKELI-----QNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQG 113
H NI+ + ++I + +Y+V + ME +LY+L+ + S I +L+Q+ +G
Sbjct: 86 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH---LSNDHICYFLYQILRG 142
Query: 114 LSYMHQNGFFHRDLKPENLLVSQGI-IKIADFGLAREIKSGPPYT----NYVGSRWYRAP 168
L Y+H HRDLKP NLL++ +KI DFGLAR +T YV +RWYRAP
Sbjct: 143 LKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 202
Query: 169 EILLQSELYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGL 228
EI+L S+ Y+ D+W++G I+AE+ + P+FPG DQ+ I G+LGSP+ + +
Sbjct: 203 EIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCII 262
Query: 229 R-QARAIKYQFPQLPRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFFKRC 287
+AR P + + L P+A A+ L + + +++P KR +AL HP+ ++
Sbjct: 263 NLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQ- 321
Query: 288 FYAP 291
+Y P
Sbjct: 322 YYDP 325
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 184 bits (466), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 104/304 (34%), Positives = 165/304 (54%), Gaps = 23/304 (7%)
Query: 3 KYSGFKELGRGAFGRVFQAFDEHTGEAVAIKEL----KQRYASWEDCLNLREVKCLRKLN 58
+Y+ +G GA+G V A+D VAIK++ Q Y LRE+K L +
Sbjct: 21 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQR----TLREIKILLRFR 76
Query: 59 HSNIVKLKELI-----QNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQG 113
H NI+ + ++I + +Y+V + ME +LY+L+ + S I +L+Q+ +G
Sbjct: 77 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH---LSNDHICYFLYQILRG 133
Query: 114 LSYMHQNGFFHRDLKPENLLVSQGI-IKIADFGLAREIKSGPPYT----NYVGSRWYRAP 168
L Y+H HRDLKP NLL++ +KI DFGLAR +T YV +RWYRAP
Sbjct: 134 LKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 193
Query: 169 EILLQSELYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGL 228
EI+L S+ Y+ D+W++G I+AE+ + P+FPG DQ+ I G+LGSP+ + +
Sbjct: 194 EIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCII 253
Query: 229 R-QARAIKYQFPQLPRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFFKRC 287
+AR P + + L P+A A+ L + + +++P KR +AL HP+ ++
Sbjct: 254 NLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQ- 312
Query: 288 FYAP 291
+Y P
Sbjct: 313 YYDP 316
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 184 bits (466), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 104/304 (34%), Positives = 165/304 (54%), Gaps = 23/304 (7%)
Query: 3 KYSGFKELGRGAFGRVFQAFDEHTGEAVAIKEL----KQRYASWEDCLNLREVKCLRKLN 58
+Y+ +G GA+G V A+D VAIK++ Q Y LRE+K L +
Sbjct: 28 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQR----TLREIKILLRFR 83
Query: 59 HSNIVKLKELI-----QNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQG 113
H NI+ + ++I + +Y+V + ME +LY+L+ + S I +L+Q+ +G
Sbjct: 84 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH---LSNDHICYFLYQILRG 140
Query: 114 LSYMHQNGFFHRDLKPENLLVSQGI-IKIADFGLAREIKSGPPYT----NYVGSRWYRAP 168
L Y+H HRDLKP NLL++ +KI DFGLAR +T YV +RWYRAP
Sbjct: 141 LKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 200
Query: 169 EILLQSELYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGL 228
EI+L S+ Y+ D+W++G I+AE+ + P+FPG DQ+ I G+LGSP+ + +
Sbjct: 201 EIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCII 260
Query: 229 R-QARAIKYQFPQLPRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFFKRC 287
+AR P + + L P+A A+ L + + +++P KR +AL HP+ ++
Sbjct: 261 NLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQ- 319
Query: 288 FYAP 291
+Y P
Sbjct: 320 YYDP 323
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 184 bits (466), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 104/304 (34%), Positives = 165/304 (54%), Gaps = 23/304 (7%)
Query: 3 KYSGFKELGRGAFGRVFQAFDEHTGEAVAIKEL----KQRYASWEDCLNLREVKCLRKLN 58
+Y+ +G GA+G V A+D VAIK++ Q Y LRE+K L +
Sbjct: 44 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQR----TLREIKILLRFR 99
Query: 59 HSNIVKLKELI-----QNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQG 113
H NI+ + ++I + +Y+V + ME +LY+L+ + S I +L+Q+ +G
Sbjct: 100 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH---LSNDHICYFLYQILRG 156
Query: 114 LSYMHQNGFFHRDLKPENLLVSQGI-IKIADFGLAREIKSGPPYT----NYVGSRWYRAP 168
L Y+H HRDLKP NLL++ +KI DFGLAR +T YV +RWYRAP
Sbjct: 157 LKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 216
Query: 169 EILLQSELYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGL 228
EI+L S+ Y+ D+W++G I+AE+ + P+FPG DQ+ I G+LGSP+ + +
Sbjct: 217 EIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCII 276
Query: 229 R-QARAIKYQFPQLPRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFFKRC 287
+AR P + + L P+A A+ L + + +++P KR +AL HP+ ++
Sbjct: 277 NLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQ- 335
Query: 288 FYAP 291
+Y P
Sbjct: 336 YYDP 339
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 183 bits (465), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 104/304 (34%), Positives = 165/304 (54%), Gaps = 23/304 (7%)
Query: 3 KYSGFKELGRGAFGRVFQAFDEHTGEAVAIKEL----KQRYASWEDCLNLREVKCLRKLN 58
+Y+ +G GA+G V A+D VAIK++ Q Y LRE+K L +
Sbjct: 26 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQR----TLREIKILLRFR 81
Query: 59 HSNIVKLKELI-----QNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQG 113
H NI+ + ++I + +Y+V + ME +LY+L+ + S I +L+Q+ +G
Sbjct: 82 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH---LSNDHICYFLYQILRG 138
Query: 114 LSYMHQNGFFHRDLKPENLLVSQGI-IKIADFGLAREIKSGPPYT----NYVGSRWYRAP 168
L Y+H HRDLKP NLL++ +KI DFGLAR +T YV +RWYRAP
Sbjct: 139 LKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 198
Query: 169 EILLQSELYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGL 228
EI+L S+ Y+ D+W++G I+AE+ + P+FPG DQ+ I G+LGSP+ + +
Sbjct: 199 EIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCII 258
Query: 229 R-QARAIKYQFPQLPRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFFKRC 287
+AR P + + L P+A A+ L + + +++P KR +AL HP+ ++
Sbjct: 259 NLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQ- 317
Query: 288 FYAP 291
+Y P
Sbjct: 318 YYDP 321
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 183 bits (465), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 104/304 (34%), Positives = 165/304 (54%), Gaps = 23/304 (7%)
Query: 3 KYSGFKELGRGAFGRVFQAFDEHTGEAVAIKEL----KQRYASWEDCLNLREVKCLRKLN 58
+Y+ +G GA+G V A+D VAIK++ Q Y LRE+K L +
Sbjct: 28 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQR----TLREIKILLRFR 83
Query: 59 HSNIVKLKELI-----QNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQG 113
H NI+ + ++I + +Y+V + ME +LY+L+ + S I +L+Q+ +G
Sbjct: 84 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKCQH---LSNDHICYFLYQILRG 140
Query: 114 LSYMHQNGFFHRDLKPENLLVSQGI-IKIADFGLAREIKSGPPYT----NYVGSRWYRAP 168
L Y+H HRDLKP NLL++ +KI DFGLAR +T YV +RWYRAP
Sbjct: 141 LKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 200
Query: 169 EILLQSELYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGL 228
EI+L S+ Y+ D+W++G I+AE+ + P+FPG DQ+ I G+LGSP+ + +
Sbjct: 201 EIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCII 260
Query: 229 R-QARAIKYQFPQLPRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFFKRC 287
+AR P + + L P+A A+ L + + +++P KR +AL HP+ ++
Sbjct: 261 NLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQ- 319
Query: 288 FYAP 291
+Y P
Sbjct: 320 YYDP 323
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 183 bits (464), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 101/304 (33%), Positives = 170/304 (55%), Gaps = 23/304 (7%)
Query: 3 KYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELK----QRYASWEDCLNLREVKCLRKLN 58
+Y+ + +G GA+G V A+D VAIK++ Q Y LRE++ L +
Sbjct: 44 RYTQLQYIGEGAYGMVSSAYDHVRKTRVAIKKISPFEHQTYCQR----TLREIQILLRFR 99
Query: 59 HSNIVKLKELIQNNN-----RLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQG 113
H N++ ++++++ + +Y+V + ME +LY+L+ ++ S I +L+Q+ +G
Sbjct: 100 HENVIGIRDILRASTLEAMRDVYIVQDLMETDLYKLLKSQQ---LSNDHICYFLYQILRG 156
Query: 114 LSYMHQNGFFHRDLKPENLLVSQGI-IKIADFGLAREIKSGPPYTNY----VGSRWYRAP 168
L Y+H HRDLKP NLL++ +KI DFGLAR +T + V +RWYRAP
Sbjct: 157 LKYIHSANVLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEXVATRWYRAP 216
Query: 169 EILLQSELYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGL 228
EI+L S+ Y+ D+W++G I+AE+ + P+FPG DQ+ I G+LGSP+ + +
Sbjct: 217 EIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCII 276
Query: 229 R-QARAIKYQFPQLPRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFFKRC 287
+AR P + + L P + A+ L + + +++P+KR T EAL HP+ ++
Sbjct: 277 NMKARNYLQSLPSKTKVAWAKLFPKSDSKALDLLDRMLTFNPNKRITVEEALAHPYLEQ- 335
Query: 288 FYAP 291
+Y P
Sbjct: 336 YYDP 339
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 183 bits (464), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 104/304 (34%), Positives = 164/304 (53%), Gaps = 23/304 (7%)
Query: 3 KYSGFKELGRGAFGRVFQAFDEHTGEAVAIKEL----KQRYASWEDCLNLREVKCLRKLN 58
+Y+ +G GA+G V A+D VAIK++ Q Y LRE+K L +
Sbjct: 22 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQR----TLREIKILLRFR 77
Query: 59 HSNIVKLKELI-----QNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQG 113
H NI+ + ++I + +Y+V + ME +LY+L+ + S I +L+Q+ +G
Sbjct: 78 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH---LSNDHICYFLYQILRG 134
Query: 114 LSYMHQNGFFHRDLKPENLLVSQGI-IKIADFGLAREIKSGPPYT----NYVGSRWYRAP 168
L Y+H HRDLKP NLL++ +KI DFGLAR +T YV +RWYRAP
Sbjct: 135 LKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 194
Query: 169 EILLQSELYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGL 228
EI+L S+ Y+ D+W++G I+AE+ + P+FPG DQ+ I G+LGSP + +
Sbjct: 195 EIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPEQEDLNCII 254
Query: 229 R-QARAIKYQFPQLPRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFFKRC 287
+AR P + + L P+A A+ L + + +++P KR +AL HP+ ++
Sbjct: 255 NLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQ- 313
Query: 288 FYAP 291
+Y P
Sbjct: 314 YYDP 317
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 182 bits (463), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 103/304 (33%), Positives = 165/304 (54%), Gaps = 23/304 (7%)
Query: 3 KYSGFKELGRGAFGRVFQAFDEHTGEAVAIKEL----KQRYASWEDCLNLREVKCLRKLN 58
+Y+ +G GA+G V A+D VAI+++ Q Y LRE+K L +
Sbjct: 28 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIRKISPFEHQTYCQR----TLREIKILLRFR 83
Query: 59 HSNIVKLKELI-----QNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQG 113
H NI+ + ++I + +Y+V + ME +LY+L+ + S I +L+Q+ +G
Sbjct: 84 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH---LSNDHICYFLYQILRG 140
Query: 114 LSYMHQNGFFHRDLKPENLLVSQGI-IKIADFGLAREIKSGPPYT----NYVGSRWYRAP 168
L Y+H HRDLKP NLL++ +KI DFGLAR +T YV +RWYRAP
Sbjct: 141 LKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 200
Query: 169 EILLQSELYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGL 228
EI+L S+ Y+ D+W++G I+AE+ + P+FPG DQ+ I G+LGSP+ + +
Sbjct: 201 EIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCII 260
Query: 229 R-QARAIKYQFPQLPRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFFKRC 287
+AR P + + L P+A A+ L + + +++P KR +AL HP+ ++
Sbjct: 261 NLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQ- 319
Query: 288 FYAP 291
+Y P
Sbjct: 320 YYDP 323
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 182 bits (462), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 103/304 (33%), Positives = 165/304 (54%), Gaps = 23/304 (7%)
Query: 3 KYSGFKELGRGAFGRVFQAFDEHTGEAVAIKEL----KQRYASWEDCLNLREVKCLRKLN 58
+Y+ +G GA+G V A+D VAIK++ Q Y LRE+K L +
Sbjct: 28 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQR----TLREIKILLRFR 83
Query: 59 HSNIVKLKELI-----QNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQG 113
H NI+ + ++I + +Y+V + ME +LY+L+ + S I +L+Q+ +G
Sbjct: 84 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH---LSNDHICYFLYQILRG 140
Query: 114 LSYMHQNGFFHRDLKPENLLVSQGI-IKIADFGLAREIKSGPPYTNY----VGSRWYRAP 168
L Y+H HRDLKP NLL++ +KI DFGLAR +T + V +RWYRAP
Sbjct: 141 LKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAP 200
Query: 169 EILLQSELYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGL 228
EI+L S+ Y+ D+W++G I+AE+ + P+FPG DQ+ I G+LGSP+ + +
Sbjct: 201 EIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCII 260
Query: 229 R-QARAIKYQFPQLPRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFFKRC 287
+AR P + + L P+A A+ L + + +++P KR +AL HP+ ++
Sbjct: 261 NLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQ- 319
Query: 288 FYAP 291
+Y P
Sbjct: 320 YYDP 323
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 182 bits (462), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 103/304 (33%), Positives = 165/304 (54%), Gaps = 23/304 (7%)
Query: 3 KYSGFKELGRGAFGRVFQAFDEHTGEAVAIKEL----KQRYASWEDCLNLREVKCLRKLN 58
+Y+ +G GA+G V A+D VAIK++ Q Y LRE+K L +
Sbjct: 29 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQR----TLREIKILLRFR 84
Query: 59 HSNIVKLKELI-----QNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQG 113
H NI+ + ++I + +Y+V + ME +LY+L+ + S I +L+Q+ +G
Sbjct: 85 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH---LSNDHICYFLYQILRG 141
Query: 114 LSYMHQNGFFHRDLKPENLLVSQGI-IKIADFGLAREIKSGPPYTNY----VGSRWYRAP 168
L Y+H HRDLKP NLL++ +KI DFGLAR +T + V +RWYRAP
Sbjct: 142 LKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAP 201
Query: 169 EILLQSELYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGL 228
EI+L S+ Y+ D+W++G I+AE+ + P+FPG DQ+ I G+LGSP+ + +
Sbjct: 202 EIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCII 261
Query: 229 R-QARAIKYQFPQLPRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFFKRC 287
+AR P + + L P+A A+ L + + +++P KR +AL HP+ ++
Sbjct: 262 NLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQ- 320
Query: 288 FYAP 291
+Y P
Sbjct: 321 YYDP 324
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 182 bits (461), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 102/300 (34%), Positives = 161/300 (53%), Gaps = 15/300 (5%)
Query: 3 KYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLNLREVKCLRKLNHSNI 62
+Y+ +G GA+G V A+D VAIK++ LRE+K L + H NI
Sbjct: 44 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 103
Query: 63 VKLKELI-----QNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYM 117
+ + ++I + +YLV M +LY+L+ + S I +L+Q+ +GL Y+
Sbjct: 104 IGINDIIRAPTIEQMKDVYLVTHLMGADLYKLLKTQH---LSNDHICYFLYQILRGLKYI 160
Query: 118 HQNGFFHRDLKPENLLVSQGI-IKIADFGLAREIKSGPPYT----NYVGSRWYRAPEILL 172
H HRDLKP NLL++ +KI DFGLAR +T YV +RWYRAPEI+L
Sbjct: 161 HSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 220
Query: 173 QSELYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLR-QA 231
S+ Y+ D+W++G I+AE+ + P+FPG DQ+ I G+LGSP+ + + +A
Sbjct: 221 NSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKA 280
Query: 232 RAIKYQFPQLPRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFFKRCFYAP 291
R P + + L P+A A+ L + + +++P KR +AL HP+ ++ +Y P
Sbjct: 281 RNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQ-YYDP 339
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 181 bits (460), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 112/303 (36%), Positives = 177/303 (58%), Gaps = 22/303 (7%)
Query: 1 MDKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCL---NLREVKCLRKL 57
M KY +++G G +G VF+A + T E VA+K + R ++ + LRE+ L++L
Sbjct: 1 MQKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRV--RLDDDDEGVPSSALREICLLKEL 58
Query: 58 NHSNIVKLKELIQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEI-KAWLFQVFQGLSY 116
H NIV+L +++ ++ +L LVFE + +L + + + L +PEI K++LFQ+ +GL +
Sbjct: 59 KHKNIVRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCNGDL--DPEIVKSFLFQLLKGLGF 116
Query: 117 MHQNGFFHRDLKPENLLVSQ-GIIKIADFGLAREIKSGPP---YTNYVGSRWYRAPEILL 172
H HRDLKP+NLL+++ G +K+ADFGLAR G P Y+ V + WYR P++L
Sbjct: 117 CHSRNVLHRDLKPQNLLINRNGELKLADFGLARAF--GIPVRCYSAEVVTLWYRPPDVLF 174
Query: 173 QSELYSSKADMWAMGAIMAELFTFC-PLFPGASEADQMYKICGVLGSPTMDSWADGLRQA 231
++LYS+ DMW+ G I AEL PLFPG DQ+ +I +LG+PT + W
Sbjct: 175 GAKLYSTSIDMWSAGCIFAELANAARPLFPGNDVDDQLKRIFRLLGTPTEEQWPS---MT 231
Query: 232 RAIKYQ-FPQLP-RANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFFKRCFY 289
+ Y+ +P P +L ++P + L ++L +P +R +A EALQHP+F +
Sbjct: 232 KLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYFSD--F 289
Query: 290 APP 292
PP
Sbjct: 290 CPP 292
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 181 bits (460), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 104/304 (34%), Positives = 163/304 (53%), Gaps = 23/304 (7%)
Query: 3 KYSGFKELGRGAFGRVFQAFDEHTGEAVAIKEL----KQRYASWEDCLNLREVKCLRKLN 58
+Y+ +G GA+G V A+D VAIK++ Q Y LRE+K L
Sbjct: 26 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQR----TLREIKILLAFR 81
Query: 59 HSNIVKLKELI-----QNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQG 113
H NI+ + ++I + +Y+V + ME +LY+L+ + S I +L+Q+ +G
Sbjct: 82 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH---LSNDHICYFLYQILRG 138
Query: 114 LSYMHQNGFFHRDLKPENLLVSQGI-IKIADFGLAREIKSGPPYT----NYVGSRWYRAP 168
L Y+H HRDLKP NLL++ +KI DFGLAR +T YV +RWYRAP
Sbjct: 139 LKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 198
Query: 169 EILLQSELYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGL 228
EI+L S+ Y+ D+W++G I+AE+ + P+FPG DQ+ I G+LGSP+ + +
Sbjct: 199 EIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCII 258
Query: 229 R-QARAIKYQFPQLPRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFFKRC 287
+AR P + + L P+A A+ L + + +++P KR +AL HP+ +
Sbjct: 259 NLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLAQ- 317
Query: 288 FYAP 291
+Y P
Sbjct: 318 YYDP 321
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 181 bits (458), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 104/293 (35%), Positives = 158/293 (53%), Gaps = 13/293 (4%)
Query: 1 MDKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKE-LKQRYASWEDCLNLREVKCLRKLNH 59
M+KY +G G++G V + ++ TG VAIK+ L+ + +RE+K L++L H
Sbjct: 24 MEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRH 83
Query: 60 SNIVKLKELIQNNNRLYLVFECMECNLYQLMAARDRKLFSE----PEIKAWLFQVFQGLS 115
N+V L E+ + R YLVFE ++ + D +LF ++ +LFQ+ G+
Sbjct: 84 ENLVNLLEVCKKKKRWYLVFEFVDHTILD-----DLELFPNGLDYQVVQKYLFQIINGIG 138
Query: 116 YMHQNGFFHRDLKPENLLVSQ-GIIKIADFGLAREIKS-GPPYTNYVGSRWYRAPEILLQ 173
+ H + HRD+KPEN+LVSQ G++K+ DFG AR + + G Y + V +RWYRAPE+L+
Sbjct: 139 FCHSHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYDDEVATRWYRAPELLVG 198
Query: 174 SELYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQARA 233
Y D+WA+G ++ E+F PLFPG S+ DQ+Y I LG+ +
Sbjct: 199 DVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFNKNPVF 258
Query: 234 IKYQFPQL-PRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFFK 285
+ P++ R L P S+ I L + DP KRP AE L H FF+
Sbjct: 259 AGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLHHDFFQ 311
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 179 bits (454), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 114/344 (33%), Positives = 173/344 (50%), Gaps = 63/344 (18%)
Query: 2 DKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLN-LREVKCLRKLNHS 60
D Y +GRG++G V+ A+D++T + VAIK++ + + DC LRE+ L +L
Sbjct: 26 DNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSD 85
Query: 61 NIVKLKELIQNNN-----RLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLS 115
I++L +LI ++ LY+V E + +L +L + +E IK L+ + G +
Sbjct: 86 YIIRLYDLIIPDDLLKFDELYIVLEIADSDLKKLF--KTPIFLTEEHIKTILYNLLLGEN 143
Query: 116 YMHQNGFFHRDLKPENLLVSQGI-IKIADFGLAREIKS----------------GP---- 154
++H++G HRDLKP N L++Q +K+ DFGLAR I S GP
Sbjct: 144 FIHESGIIHRDLKPANCLLNQDCSVKVCDFGLARTINSEKDTNIVNDLEENEEPGPHNKN 203
Query: 155 ---PYTNYVGSRWYRAPEILLQSELYSSKADMWAMGAIMAELFTFC-----------PLF 200
T++V +RWYRAPE++L E Y+ D+W+ G I AEL PLF
Sbjct: 204 LKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHINDPTNRFPLF 263
Query: 201 PGA-----------------SEADQMYKICGVLGSPTMDSWADGLRQARAIKY--QFPQL 241
PG+ S DQ+ I ++G+PT D + + + IKY FP
Sbjct: 264 PGSSCFPLSPDRNSKKVHEKSNRDQLNIIFNIIGTPTEDDLKN-INKPEVIKYIKLFPHR 322
Query: 242 PRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFFK 285
NL PS S D I+L ES+ ++P+KR T +AL HP+ K
Sbjct: 323 KPINLKQKYPSISDDGINLLESMLKFNPNKRITIDQALDHPYLK 366
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 179 bits (453), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 111/303 (36%), Positives = 177/303 (58%), Gaps = 22/303 (7%)
Query: 1 MDKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCL---NLREVKCLRKL 57
M KY +++G G +G VF+A + T E VA+K + R ++ + LRE+ L++L
Sbjct: 1 MQKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRV--RLDDDDEGVPSSALREICLLKEL 58
Query: 58 NHSNIVKLKELIQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEI-KAWLFQVFQGLSY 116
H NIV+L +++ ++ +L LVFE + +L + + + L +PEI K++LFQ+ +GL +
Sbjct: 59 KHKNIVRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCNGDL--DPEIVKSFLFQLLKGLGF 116
Query: 117 MHQNGFFHRDLKPENLLVSQ-GIIKIADFGLAREIKSGPP---YTNYVGSRWYRAPEILL 172
H HRDLKP+NLL+++ G +K+A+FGLAR G P Y+ V + WYR P++L
Sbjct: 117 CHSRNVLHRDLKPQNLLINRNGELKLANFGLARAF--GIPVRCYSAEVVTLWYRPPDVLF 174
Query: 173 QSELYSSKADMWAMGAIMAELFTFC-PLFPGASEADQMYKICGVLGSPTMDSWADGLRQA 231
++LYS+ DMW+ G I AEL PLFPG DQ+ +I +LG+PT + W
Sbjct: 175 GAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPS---MT 231
Query: 232 RAIKYQ-FPQLP-RANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFFKRCFY 289
+ Y+ +P P +L ++P + L ++L +P +R +A EALQHP+F +
Sbjct: 232 KLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYFSD--F 289
Query: 290 APP 292
PP
Sbjct: 290 CPP 292
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 178 bits (451), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 97/301 (32%), Positives = 165/301 (54%), Gaps = 18/301 (5%)
Query: 3 KYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLNLREVKCLRKLNHSNI 62
++ ++LG G + V++ ++ TG VA+KE+K +RE+ +++L H NI
Sbjct: 6 QFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENI 65
Query: 63 VKLKELIQNNNRLYLVFECMECNLYQLMAARDRKLFSEPE------IKAWLFQVFQGLSY 116
V+L ++I N+L LVFE M+ +L + M +R + + P +K + +Q+ QGL++
Sbjct: 66 VRLYDVIHTENKLTLVFEFMDNDLKKYMDSR--TVGNTPRGLELNLVKYFQWQLLQGLAF 123
Query: 117 MHQNGFFHRDLKPENLLVSQ-GIIKIADFGLAREIKSGPPYTNY---VGSRWYRAPEILL 172
H+N HRDLKP+NLL+++ G +K+ DFGLAR G P + V + WYRAP++L+
Sbjct: 124 CHENKILHRDLKPQNLLINKRGQLKLGDFGLARAF--GIPVNTFSSEVVTLWYRAPDVLM 181
Query: 173 QSELYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQAR 232
S YS+ D+W+ G I+AE+ T PLFPG ++ +Q+ I ++G+P W + +
Sbjct: 182 GSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIMGTPNESLWPSVTKLPK 241
Query: 233 AIKYQFPQLPRANLSALMPSASQ----DAISLFESLCSWDPSKRPTAAEALQHPFFKRCF 288
+ PR L P + + + L +P R +A +AL HP+F +
Sbjct: 242 YNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALHHPWFAEYY 301
Query: 289 Y 289
+
Sbjct: 302 H 302
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 178 bits (451), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 108/334 (32%), Positives = 182/334 (54%), Gaps = 50/334 (14%)
Query: 3 KYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDC-LNLREVKCLRKLN-HS 60
KY K+LG+GA+G V+++ D TGE VA+K++ + + D RE+ L +L+ H
Sbjct: 10 KYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHE 69
Query: 61 NIVKLKELIQ--NNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWL-FQVFQGLSYM 117
NIV L +++ N+ +YLVF+ ME +L+ ++ A EP K ++ +Q+ + + Y+
Sbjct: 70 NIVNLLNVLRADNDRDVYLVFDYMETDLHAVIRAN----ILEPVHKQYVVYQLIKVIKYL 125
Query: 118 HQNGFFHRDLKPENLLV-SQGIIKIADFGLAREI----------------------KSGP 154
H G HRD+KP N+L+ ++ +K+ADFGL+R P
Sbjct: 126 HSGGLLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQP 185
Query: 155 PYTNYVGSRWYRAPEILLQSELYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICG 214
T+YV +RWYRAPEILL S Y+ DMW++G I+ E+ P+FPG+S +Q+ +I G
Sbjct: 186 ILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTMNQLERIIG 245
Query: 215 VLGSPTMDS-------WADGLRQARAIKYQFPQLPRAN--------LSALMPSA--SQDA 257
V+ P+ + +A + ++ K + Q + + L + P A +++A
Sbjct: 246 VIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKADCNEEA 305
Query: 258 ISLFESLCSWDPSKRPTAAEALQHPFFKRCFYAP 291
+ L + L ++P+KR +A +AL+HPF F+ P
Sbjct: 306 LDLLDKLLQFNPNKRISANDALKHPFVS-IFHNP 338
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 177 bits (450), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 100/292 (34%), Positives = 157/292 (53%), Gaps = 14/292 (4%)
Query: 2 DKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDC-LNLREVKCLRKLNHS 60
++Y +G GA+G V AFD TG VA+K+L + + S RE++ L+ + H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 61 NIVKLKEL------IQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGL 114
N++ L ++ ++ N +YLV M +L ++ + ++ ++ ++Q+ +GL
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRGL 138
Query: 115 SYMHQNGFFHRDLKPENLLVSQGI-IKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQ 173
Y+H HRDLKP NL V++ +KI DFGLAR + T YV +RWYRAPEI+L
Sbjct: 139 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLN 196
Query: 174 SELYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWAD-GLRQAR 232
+ Y+ D+W++G IMAEL T LFPG DQ+ I ++G+P + AR
Sbjct: 197 AMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESAR 256
Query: 233 AIKYQFPQLPRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFF 284
Q+P+ N + + A+ A+ L E + D KR TAA+AL H +F
Sbjct: 257 NYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 177 bits (448), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 101/299 (33%), Positives = 161/299 (53%), Gaps = 16/299 (5%)
Query: 2 DKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDC-LNLREVKCLRKLNHS 60
D+Y + +G GA+G V A TG+ VAIK++ + + LRE+K L+ H
Sbjct: 54 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHD 113
Query: 61 NIVKLKELIQNN------NRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGL 114
NI+ +K++++ +Y+V + ME +L+Q++ + + ++ +L+Q+ +GL
Sbjct: 114 NIIAIKDILRPTVPYGEFKSVYVVLDLMESDLHQII--HSSQPLTLEHVRYFLYQLLRGL 171
Query: 115 SYMHQNGFFHRDLKPENLLVSQGI-IKIADFGLAREIKSGPP-----YTNYVGSRWYRAP 168
YMH HRDLKP NLLV++ +KI DFG+AR + + P T YV +RWYRAP
Sbjct: 172 KYMHSAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAP 231
Query: 169 EILLQSELYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSW-ADG 227
E++L Y+ D+W++G I E+ LFPG + Q+ I VLG+P+ A G
Sbjct: 232 ELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSPAVIQAVG 291
Query: 228 LRQARAIKYQFPQLPRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFFKR 286
+ RA P + P A + A+SL + ++PS R +AA AL+HPF +
Sbjct: 292 AERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALRHPFLAK 350
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 176 bits (447), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 102/296 (34%), Positives = 160/296 (54%), Gaps = 22/296 (7%)
Query: 2 DKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDC-LNLREVKCLRKLNHS 60
++Y +G GA+G V AFD TG VA+K+L + + S RE++ L+ + H
Sbjct: 28 ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 87
Query: 61 NIVKLKEL------IQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGL 114
N++ L ++ ++ N +YLV M +L ++ + ++ ++ ++Q+ +GL
Sbjct: 88 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRGL 144
Query: 115 SYMHQNGFFHRDLKPENLLVSQGI-IKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQ 173
Y+H HRDLKP NL V++ +KI DFGLAR + T YV +RWYRAPEI+L
Sbjct: 145 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLN 202
Query: 174 SELYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQ--- 230
Y+ D+W++G IMAEL T LFPG DQ+ I ++G+P A+ L++
Sbjct: 203 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG----AELLKKISS 258
Query: 231 --ARAIKYQFPQLPRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFF 284
AR Q+P+ N + + A+ A+ L E + D KR TAA+AL H +F
Sbjct: 259 ESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 314
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 176 bits (447), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 102/296 (34%), Positives = 160/296 (54%), Gaps = 22/296 (7%)
Query: 2 DKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDC-LNLREVKCLRKLNHS 60
++Y +G GA+G V AFD TG VA+K+L + + S RE++ L+ + H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 61 NIVKLKEL------IQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGL 114
N++ L ++ ++ N +YLV M +L ++ + ++ ++ ++Q+ +GL
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRGL 138
Query: 115 SYMHQNGFFHRDLKPENLLVSQGI-IKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQ 173
Y+H HRDLKP NL V++ +KI DFGLAR + T YV +RWYRAPEI+L
Sbjct: 139 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLN 196
Query: 174 SELYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQ--- 230
Y+ D+W++G IMAEL T LFPG DQ+ I ++G+P A+ L++
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG----AELLKKISS 252
Query: 231 --ARAIKYQFPQLPRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFF 284
AR Q+P+ N + + A+ A+ L E + D KR TAA+AL H +F
Sbjct: 253 ESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 176 bits (447), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 102/296 (34%), Positives = 160/296 (54%), Gaps = 22/296 (7%)
Query: 2 DKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDC-LNLREVKCLRKLNHS 60
++Y +G GA+G V AFD TG VA+K+L + + S RE++ L+ + H
Sbjct: 18 ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 77
Query: 61 NIVKLKEL------IQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGL 114
N++ L ++ ++ N +YLV M +L ++ + ++ ++ ++Q+ +GL
Sbjct: 78 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRGL 134
Query: 115 SYMHQNGFFHRDLKPENLLVSQGI-IKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQ 173
Y+H HRDLKP NL V++ +KI DFGLAR + T YV +RWYRAPEI+L
Sbjct: 135 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLN 192
Query: 174 SELYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQ--- 230
Y+ D+W++G IMAEL T LFPG DQ+ I ++G+P A+ L++
Sbjct: 193 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG----AELLKKISS 248
Query: 231 --ARAIKYQFPQLPRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFF 284
AR Q+P+ N + + A+ A+ L E + D KR TAA+AL H +F
Sbjct: 249 ESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 304
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 176 bits (447), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 100/292 (34%), Positives = 156/292 (53%), Gaps = 14/292 (4%)
Query: 2 DKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDC-LNLREVKCLRKLNHS 60
++Y +G GA+G V AFD TG VA+K+L + + S RE++ L+ + H
Sbjct: 42 ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 101
Query: 61 NIVKLKEL------IQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGL 114
N++ L ++ ++ N +YLV M +L ++ + ++ ++ ++Q+ +GL
Sbjct: 102 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRGL 158
Query: 115 SYMHQNGFFHRDLKPENLLVSQGI-IKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQ 173
Y+H HRDLKP NL V++ +KI DFGLAR + T YV +RWYRAPEI+L
Sbjct: 159 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLN 216
Query: 174 SELYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWAD-GLRQAR 232
Y+ D+W++G IMAEL T LFPG DQ+ I ++G+P + AR
Sbjct: 217 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESAR 276
Query: 233 AIKYQFPQLPRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFF 284
Q+P+ N + + A+ A+ L E + D KR TAA+AL H +F
Sbjct: 277 NYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 328
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 176 bits (447), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 100/292 (34%), Positives = 156/292 (53%), Gaps = 14/292 (4%)
Query: 2 DKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDC-LNLREVKCLRKLNHS 60
++Y +G GA+G V AFD TG VA+K+L + + S RE++ L+ + H
Sbjct: 41 ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 100
Query: 61 NIVKLKEL------IQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGL 114
N++ L ++ ++ N +YLV M +L ++ + ++ ++ ++Q+ +GL
Sbjct: 101 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRGL 157
Query: 115 SYMHQNGFFHRDLKPENLLVSQGI-IKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQ 173
Y+H HRDLKP NL V++ +KI DFGLAR + T YV +RWYRAPEI+L
Sbjct: 158 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLN 215
Query: 174 SELYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWAD-GLRQAR 232
Y+ D+W++G IMAEL T LFPG DQ+ I ++G+P + AR
Sbjct: 216 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESAR 275
Query: 233 AIKYQFPQLPRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFF 284
Q+P+ N + + A+ A+ L E + D KR TAA+AL H +F
Sbjct: 276 NYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 327
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 176 bits (447), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 102/296 (34%), Positives = 160/296 (54%), Gaps = 22/296 (7%)
Query: 2 DKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDC-LNLREVKCLRKLNHS 60
++Y +G GA+G V AFD TG VA+K+L + + S RE++ L+ + H
Sbjct: 32 ERYQNLAPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 91
Query: 61 NIVKLKEL------IQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGL 114
N++ L ++ ++ N +YLV M +L ++ + ++ ++ ++Q+ +GL
Sbjct: 92 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRGL 148
Query: 115 SYMHQNGFFHRDLKPENLLVSQGI-IKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQ 173
Y+H HRDLKP NL V++ +KI DFGLAR + T YV +RWYRAPEI+L
Sbjct: 149 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLN 206
Query: 174 SELYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQ--- 230
Y+ D+W++G IMAEL T LFPG DQ+ I ++G+P A+ L++
Sbjct: 207 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG----AELLKKISS 262
Query: 231 --ARAIKYQFPQLPRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFF 284
AR Q+P+ N + + A+ A+ L E + D KR TAA+AL H +F
Sbjct: 263 ESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 318
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 176 bits (446), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 101/299 (33%), Positives = 161/299 (53%), Gaps = 16/299 (5%)
Query: 2 DKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDC-LNLREVKCLRKLNHS 60
D+Y + +G GA+G V A TG+ VAIK++ + + LRE+K L+ H
Sbjct: 55 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHD 114
Query: 61 NIVKLKELIQNN------NRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGL 114
NI+ +K++++ +Y+V + ME +L+Q++ + + ++ +L+Q+ +GL
Sbjct: 115 NIIAIKDILRPTVPYGEFKSVYVVLDLMESDLHQII--HSSQPLTLEHVRYFLYQLLRGL 172
Query: 115 SYMHQNGFFHRDLKPENLLVSQGI-IKIADFGLAREIKSGPP-----YTNYVGSRWYRAP 168
YMH HRDLKP NLLV++ +KI DFG+AR + + P T YV +RWYRAP
Sbjct: 173 KYMHSAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAP 232
Query: 169 EILLQSELYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDS-WADG 227
E++L Y+ D+W++G I E+ LFPG + Q+ I VLG+P+ A G
Sbjct: 233 ELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSPAVIQAVG 292
Query: 228 LRQARAIKYQFPQLPRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFFKR 286
+ RA P + P A + A+SL + ++PS R +AA AL+HPF +
Sbjct: 293 AERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALRHPFLAK 351
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 176 bits (446), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 102/296 (34%), Positives = 160/296 (54%), Gaps = 22/296 (7%)
Query: 2 DKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDC-LNLREVKCLRKLNHS 60
++Y +G GA+G V AFD TG VA+K+L + + S RE++ L+ + H
Sbjct: 27 ERYQNLSPIGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 86
Query: 61 NIVKLKEL------IQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGL 114
N++ L ++ ++ N +YLV M +L ++ + ++ ++ ++Q+ +GL
Sbjct: 87 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRGL 143
Query: 115 SYMHQNGFFHRDLKPENLLVSQGI-IKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQ 173
Y+H HRDLKP NL V++ +KI DFGLAR + T YV +RWYRAPEI+L
Sbjct: 144 KYIHSADIIHRDLKPSNLAVNEDXELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLN 201
Query: 174 SELYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQ--- 230
Y+ D+W++G IMAEL T LFPG DQ+ I ++G+P A+ L++
Sbjct: 202 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG----AELLKKISS 257
Query: 231 --ARAIKYQFPQLPRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFF 284
AR Q+P+ N + + A+ A+ L E + D KR TAA+AL H +F
Sbjct: 258 ESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 313
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 176 bits (446), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 104/296 (35%), Positives = 163/296 (55%), Gaps = 22/296 (7%)
Query: 2 DKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDC-LNLREVKCLRKLNHS 60
++Y +G GA+G V AFD TG VA+K+L + + S RE++ L+ + H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 61 NIVKLKEL------IQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGL 114
N++ L ++ ++ N +YLV M +L ++ + +KL ++ ++ ++Q+ +GL
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV--KXQKL-TDDHVQFLIYQILRGL 138
Query: 115 SYMHQNGFFHRDLKPENLLVSQGI-IKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQ 173
Y+H HRDLKP NL V++ +KI DFGLAR + T YV +RWYRAPEI+L
Sbjct: 139 KYIHSADIIHRDLKPSNLAVNEDXELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLN 196
Query: 174 SELYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQ--- 230
Y+ D+W++G IMAEL T LFPG DQ+ I ++G+P A+ L++
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG----AELLKKISS 252
Query: 231 --ARAIKYQFPQLPRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFF 284
AR Q+P+ N + + A+ A+ L E + D KR TAA+AL H +F
Sbjct: 253 ESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 176 bits (446), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 102/296 (34%), Positives = 160/296 (54%), Gaps = 22/296 (7%)
Query: 2 DKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDC-LNLREVKCLRKLNHS 60
++Y +G GA+G V AFD TG VA+K+L + + S RE++ L+ + H
Sbjct: 29 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 88
Query: 61 NIVKLKEL------IQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGL 114
N++ L ++ ++ N +YLV M +L ++ + ++ ++ ++Q+ +GL
Sbjct: 89 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRGL 145
Query: 115 SYMHQNGFFHRDLKPENLLVSQGI-IKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQ 173
Y+H HRDLKP NL V++ +KI DFGLAR + T YV +RWYRAPEI+L
Sbjct: 146 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARH--TADEMTGYVATRWYRAPEIMLN 203
Query: 174 SELYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQ--- 230
Y+ D+W++G IMAEL T LFPG DQ+ I ++G+P A+ L++
Sbjct: 204 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG----AELLKKISS 259
Query: 231 --ARAIKYQFPQLPRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFF 284
AR Q+P+ N + + A+ A+ L E + D KR TAA+AL H +F
Sbjct: 260 ESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 315
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 176 bits (446), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 102/296 (34%), Positives = 160/296 (54%), Gaps = 22/296 (7%)
Query: 2 DKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDC-LNLREVKCLRKLNHS 60
++Y +G GA+G V AFD TG VA+K+L + + S RE++ L+ + H
Sbjct: 33 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 92
Query: 61 NIVKLKEL------IQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGL 114
N++ L ++ ++ N +YLV M +L ++ + ++ ++ ++Q+ +GL
Sbjct: 93 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRGL 149
Query: 115 SYMHQNGFFHRDLKPENLLVSQGI-IKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQ 173
Y+H HRDLKP NL V++ +KI DFGLAR + T YV +RWYRAPEI+L
Sbjct: 150 KYIHSADIIHRDLKPSNLAVNEDXELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLN 207
Query: 174 SELYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQ--- 230
Y+ D+W++G IMAEL T LFPG DQ+ I ++G+P A+ L++
Sbjct: 208 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG----AELLKKISS 263
Query: 231 --ARAIKYQFPQLPRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFF 284
AR Q+P+ N + + A+ A+ L E + D KR TAA+AL H +F
Sbjct: 264 ESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 319
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 176 bits (446), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 102/296 (34%), Positives = 160/296 (54%), Gaps = 22/296 (7%)
Query: 2 DKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDC-LNLREVKCLRKLNHS 60
++Y +G GA+G V AFD TG VA+K+L + + S RE++ L+ + H
Sbjct: 29 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 88
Query: 61 NIVKLKEL------IQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGL 114
N++ L ++ ++ N +YLV M +L ++ + ++ ++ ++Q+ +GL
Sbjct: 89 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRGL 145
Query: 115 SYMHQNGFFHRDLKPENLLVSQGI-IKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQ 173
Y+H HRDLKP NL V++ +KI DFGLAR + T YV +RWYRAPEI+L
Sbjct: 146 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARH--TADEMTGYVATRWYRAPEIMLN 203
Query: 174 SELYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQ--- 230
Y+ D+W++G IMAEL T LFPG DQ+ I ++G+P A+ L++
Sbjct: 204 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG----AELLKKISS 259
Query: 231 --ARAIKYQFPQLPRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFF 284
AR Q+P+ N + + A+ A+ L E + D KR TAA+AL H +F
Sbjct: 260 ESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 315
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 176 bits (446), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 102/296 (34%), Positives = 160/296 (54%), Gaps = 22/296 (7%)
Query: 2 DKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDC-LNLREVKCLRKLNHS 60
++Y +G GA+G V AFD TG VA+K+L + + S RE++ L+ + H
Sbjct: 29 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 88
Query: 61 NIVKLKEL------IQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGL 114
N++ L ++ ++ N +YLV M +L ++ + ++ ++ ++Q+ +GL
Sbjct: 89 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRGL 145
Query: 115 SYMHQNGFFHRDLKPENLLVSQGI-IKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQ 173
Y+H HRDLKP NL V++ +KI DFGLAR + T YV +RWYRAPEI+L
Sbjct: 146 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARH--TADEMTGYVATRWYRAPEIMLN 203
Query: 174 SELYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQ--- 230
Y+ D+W++G IMAEL T LFPG DQ+ I ++G+P A+ L++
Sbjct: 204 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG----AELLKKISS 259
Query: 231 --ARAIKYQFPQLPRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFF 284
AR Q+P+ N + + A+ A+ L E + D KR TAA+AL H +F
Sbjct: 260 ESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 315
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 176 bits (446), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 102/296 (34%), Positives = 160/296 (54%), Gaps = 22/296 (7%)
Query: 2 DKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDC-LNLREVKCLRKLNHS 60
++Y +G GA+G V AFD TG VA+K+L + + S RE++ L+ + H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 61 NIVKLKEL------IQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGL 114
N++ L ++ ++ N +YLV M +L ++ + ++ ++ ++Q+ +GL
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRGL 138
Query: 115 SYMHQNGFFHRDLKPENLLVSQGI-IKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQ 173
Y+H HRDLKP NL V++ +KI DFGLAR + T YV +RWYRAPEI+L
Sbjct: 139 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLN 196
Query: 174 SELYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQ--- 230
Y+ D+W++G IMAEL T LFPG DQ+ I ++G+P A+ L++
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG----AELLKKISS 252
Query: 231 --ARAIKYQFPQLPRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFF 284
AR Q+P+ N + + A+ A+ L E + D KR TAA+AL H +F
Sbjct: 253 ESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 176 bits (446), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 102/296 (34%), Positives = 160/296 (54%), Gaps = 22/296 (7%)
Query: 2 DKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDC-LNLREVKCLRKLNHS 60
++Y +G GA+G V AFD TG VA+K+L + + S RE++ L+ + H
Sbjct: 27 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 86
Query: 61 NIVKLKEL------IQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGL 114
N++ L ++ ++ N +YLV M +L ++ + ++ ++ ++Q+ +GL
Sbjct: 87 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRGL 143
Query: 115 SYMHQNGFFHRDLKPENLLVSQGI-IKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQ 173
Y+H HRDLKP NL V++ +KI DFGLAR + T YV +RWYRAPEI+L
Sbjct: 144 KYIHSADIIHRDLKPSNLAVNEDXELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLN 201
Query: 174 SELYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQ--- 230
Y+ D+W++G IMAEL T LFPG DQ+ I ++G+P A+ L++
Sbjct: 202 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG----AELLKKISS 257
Query: 231 --ARAIKYQFPQLPRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFF 284
AR Q+P+ N + + A+ A+ L E + D KR TAA+AL H +F
Sbjct: 258 ESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 313
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 176 bits (446), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 104/296 (35%), Positives = 163/296 (55%), Gaps = 22/296 (7%)
Query: 2 DKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDC-LNLREVKCLRKLNHS 60
++Y +G GA+G V AFD TG VA+K+L + + S RE++ L+ + H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 61 NIVKLKEL------IQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGL 114
N++ L ++ ++ N +YLV M +L ++ + +KL ++ ++ ++Q+ +GL
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV--KXQKL-TDDHVQFLIYQILRGL 138
Query: 115 SYMHQNGFFHRDLKPENLLVSQGI-IKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQ 173
Y+H HRDLKP NL V++ +KI DFGLAR + T YV +RWYRAPEI+L
Sbjct: 139 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLN 196
Query: 174 SELYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQ--- 230
Y+ D+W++G IMAEL T LFPG DQ+ I ++G+P A+ L++
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG----AELLKKISS 252
Query: 231 --ARAIKYQFPQLPRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFF 284
AR Q+P+ N + + A+ A+ L E + D KR TAA+AL H +F
Sbjct: 253 ESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 176 bits (445), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 102/296 (34%), Positives = 160/296 (54%), Gaps = 22/296 (7%)
Query: 2 DKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDC-LNLREVKCLRKLNHS 60
++Y +G GA+G V AFD TG VA+K+L + + S RE++ L+ + H
Sbjct: 27 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 86
Query: 61 NIVKLKEL------IQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGL 114
N++ L ++ ++ N +YLV M +L ++ + ++ ++ ++Q+ +GL
Sbjct: 87 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRGL 143
Query: 115 SYMHQNGFFHRDLKPENLLVSQGI-IKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQ 173
Y+H HRDLKP NL V++ +KI DFGLAR + T YV +RWYRAPEI+L
Sbjct: 144 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLN 201
Query: 174 SELYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQ--- 230
Y+ D+W++G IMAEL T LFPG DQ+ I ++G+P A+ L++
Sbjct: 202 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG----AELLKKISS 257
Query: 231 --ARAIKYQFPQLPRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFF 284
AR Q+P+ N + + A+ A+ L E + D KR TAA+AL H +F
Sbjct: 258 ESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 313
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 176 bits (445), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 102/296 (34%), Positives = 160/296 (54%), Gaps = 22/296 (7%)
Query: 2 DKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDC-LNLREVKCLRKLNHS 60
++Y +G GA+G V AFD TG VA+K+L + + S RE++ L+ + H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 61 NIVKLKEL------IQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGL 114
N++ L ++ ++ N +YLV M +L ++ + ++ ++ ++Q+ +GL
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRGL 138
Query: 115 SYMHQNGFFHRDLKPENLLVSQGI-IKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQ 173
Y+H HRDLKP NL V++ +KI DFGLAR + T YV +RWYRAPEI+L
Sbjct: 139 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLN 196
Query: 174 SELYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQ--- 230
Y+ D+W++G IMAEL T LFPG DQ+ I ++G+P A+ L++
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG----AELLKKISS 252
Query: 231 --ARAIKYQFPQLPRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFF 284
AR Q+P+ N + + A+ A+ L E + D KR TAA+AL H +F
Sbjct: 253 ESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 176 bits (445), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 102/296 (34%), Positives = 160/296 (54%), Gaps = 22/296 (7%)
Query: 2 DKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDC-LNLREVKCLRKLNHS 60
++Y +G GA+G V AFD TG VA+K+L + + S RE++ L+ + H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 61 NIVKLKEL------IQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGL 114
N++ L ++ ++ N +YLV M +L ++ + ++ ++ ++Q+ +GL
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRGL 138
Query: 115 SYMHQNGFFHRDLKPENLLVSQGI-IKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQ 173
Y+H HRDLKP NL V++ +KI DFGLAR + T YV +RWYRAPEI+L
Sbjct: 139 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLN 196
Query: 174 SELYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQ--- 230
Y+ D+W++G IMAEL T LFPG DQ+ I ++G+P A+ L++
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG----AELLKKISS 252
Query: 231 --ARAIKYQFPQLPRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFF 284
AR Q+P+ N + + A+ A+ L E + D KR TAA+AL H +F
Sbjct: 253 ESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 176 bits (445), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 102/296 (34%), Positives = 160/296 (54%), Gaps = 22/296 (7%)
Query: 2 DKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDC-LNLREVKCLRKLNHS 60
++Y +G GA+G V AFD TG VA+K+L + + S RE++ L+ + H
Sbjct: 34 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSKPFQSIIHAKRTYRELRLLKHMKHE 93
Query: 61 NIVKLKEL------IQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGL 114
N++ L ++ ++ N +YLV M +L ++ + ++ ++ ++Q+ +GL
Sbjct: 94 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRGL 150
Query: 115 SYMHQNGFFHRDLKPENLLVSQGI-IKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQ 173
Y+H HRDLKP NL V++ +KI DFGLAR + T YV +RWYRAPEI+L
Sbjct: 151 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLN 208
Query: 174 SELYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQ--- 230
Y+ D+W++G IMAEL T LFPG DQ+ I ++G+P A+ L++
Sbjct: 209 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG----AELLKKISS 264
Query: 231 --ARAIKYQFPQLPRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFF 284
AR Q+P+ N + + A+ A+ L E + D KR TAA+AL H +F
Sbjct: 265 ESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 320
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 176 bits (445), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 102/296 (34%), Positives = 160/296 (54%), Gaps = 22/296 (7%)
Query: 2 DKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDC-LNLREVKCLRKLNHS 60
++Y +G GA+G V AFD TG VA+K+L + + S RE++ L+ + H
Sbjct: 34 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 93
Query: 61 NIVKLKEL------IQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGL 114
N++ L ++ ++ N +YLV M +L ++ + ++ ++ ++Q+ +GL
Sbjct: 94 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRGL 150
Query: 115 SYMHQNGFFHRDLKPENLLVSQGI-IKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQ 173
Y+H HRDLKP NL V++ +KI DFGLAR + T YV +RWYRAPEI+L
Sbjct: 151 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLN 208
Query: 174 SELYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQ--- 230
Y+ D+W++G IMAEL T LFPG DQ+ I ++G+P A+ L++
Sbjct: 209 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG----AELLKKISS 264
Query: 231 --ARAIKYQFPQLPRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFF 284
AR Q+P+ N + + A+ A+ L E + D KR TAA+AL H +F
Sbjct: 265 ESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 320
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 176 bits (445), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 102/296 (34%), Positives = 160/296 (54%), Gaps = 22/296 (7%)
Query: 2 DKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDC-LNLREVKCLRKLNHS 60
++Y +G GA+G V AFD TG VA+K+L + + S RE++ L+ + H
Sbjct: 34 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 93
Query: 61 NIVKLKEL------IQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGL 114
N++ L ++ ++ N +YLV M +L ++ + ++ ++ ++Q+ +GL
Sbjct: 94 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRGL 150
Query: 115 SYMHQNGFFHRDLKPENLLVSQGI-IKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQ 173
Y+H HRDLKP NL V++ +KI DFGLAR + T YV +RWYRAPEI+L
Sbjct: 151 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLN 208
Query: 174 SELYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQ--- 230
Y+ D+W++G IMAEL T LFPG DQ+ I ++G+P A+ L++
Sbjct: 209 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG----AELLKKISS 264
Query: 231 --ARAIKYQFPQLPRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFF 284
AR Q+P+ N + + A+ A+ L E + D KR TAA+AL H +F
Sbjct: 265 ESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 320
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 176 bits (445), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 102/296 (34%), Positives = 160/296 (54%), Gaps = 22/296 (7%)
Query: 2 DKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDC-LNLREVKCLRKLNHS 60
++Y +G GA+G V AFD TG VA+K+L + + S RE++ L+ + H
Sbjct: 24 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 83
Query: 61 NIVKLKEL------IQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGL 114
N++ L ++ ++ N +YLV M +L ++ + ++ ++ ++Q+ +GL
Sbjct: 84 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRGL 140
Query: 115 SYMHQNGFFHRDLKPENLLVSQGI-IKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQ 173
Y+H HRDLKP NL V++ +KI DFGLAR + T YV +RWYRAPEI+L
Sbjct: 141 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLN 198
Query: 174 SELYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQ--- 230
Y+ D+W++G IMAEL T LFPG DQ+ I ++G+P A+ L++
Sbjct: 199 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG----AELLKKISS 254
Query: 231 --ARAIKYQFPQLPRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFF 284
AR Q+P+ N + + A+ A+ L E + D KR TAA+AL H +F
Sbjct: 255 ESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 310
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 176 bits (445), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 102/296 (34%), Positives = 160/296 (54%), Gaps = 22/296 (7%)
Query: 2 DKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDC-LNLREVKCLRKLNHS 60
++Y +G GA+G V AFD TG VA+K+L + + S RE++ L+ + H
Sbjct: 28 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 87
Query: 61 NIVKLKEL------IQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGL 114
N++ L ++ ++ N +YLV M +L ++ + ++ ++ ++Q+ +GL
Sbjct: 88 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRGL 144
Query: 115 SYMHQNGFFHRDLKPENLLVSQGI-IKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQ 173
Y+H HRDLKP NL V++ +KI DFGLAR + T YV +RWYRAPEI+L
Sbjct: 145 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLN 202
Query: 174 SELYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQ--- 230
Y+ D+W++G IMAEL T LFPG DQ+ I ++G+P A+ L++
Sbjct: 203 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG----AELLKKISS 258
Query: 231 --ARAIKYQFPQLPRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFF 284
AR Q+P+ N + + A+ A+ L E + D KR TAA+AL H +F
Sbjct: 259 ESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 314
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 176 bits (445), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 102/296 (34%), Positives = 160/296 (54%), Gaps = 22/296 (7%)
Query: 2 DKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDC-LNLREVKCLRKLNHS 60
++Y +G GA+G V AFD TG VA+K+L + + S RE++ L+ + H
Sbjct: 27 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 86
Query: 61 NIVKLKEL------IQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGL 114
N++ L ++ ++ N +YLV M +L ++ + ++ ++ ++Q+ +GL
Sbjct: 87 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRGL 143
Query: 115 SYMHQNGFFHRDLKPENLLVSQGI-IKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQ 173
Y+H HRDLKP NL V++ +KI DFGLAR + T YV +RWYRAPEI+L
Sbjct: 144 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLN 201
Query: 174 SELYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQ--- 230
Y+ D+W++G IMAEL T LFPG DQ+ I ++G+P A+ L++
Sbjct: 202 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG----AELLKKISS 257
Query: 231 --ARAIKYQFPQLPRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFF 284
AR Q+P+ N + + A+ A+ L E + D KR TAA+AL H +F
Sbjct: 258 ESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 313
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 176 bits (445), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 102/296 (34%), Positives = 160/296 (54%), Gaps = 22/296 (7%)
Query: 2 DKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDC-LNLREVKCLRKLNHS 60
++Y +G GA+G V AFD TG VA+K+L + + S RE++ L+ + H
Sbjct: 21 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 80
Query: 61 NIVKLKEL------IQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGL 114
N++ L ++ ++ N +YLV M +L ++ + ++ ++ ++Q+ +GL
Sbjct: 81 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRGL 137
Query: 115 SYMHQNGFFHRDLKPENLLVSQGI-IKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQ 173
Y+H HRDLKP NL V++ +KI DFGLAR + T YV +RWYRAPEI+L
Sbjct: 138 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLN 195
Query: 174 SELYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQ--- 230
Y+ D+W++G IMAEL T LFPG DQ+ I ++G+P A+ L++
Sbjct: 196 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG----AELLKKISS 251
Query: 231 --ARAIKYQFPQLPRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFF 284
AR Q+P+ N + + A+ A+ L E + D KR TAA+AL H +F
Sbjct: 252 ESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 307
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 176 bits (445), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 102/296 (34%), Positives = 160/296 (54%), Gaps = 22/296 (7%)
Query: 2 DKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDC-LNLREVKCLRKLNHS 60
++Y +G GA+G V AFD TG VA+K+L + + S RE++ L+ + H
Sbjct: 33 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 92
Query: 61 NIVKLKEL------IQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGL 114
N++ L ++ ++ N +YLV M +L ++ + ++ ++ ++Q+ +GL
Sbjct: 93 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRGL 149
Query: 115 SYMHQNGFFHRDLKPENLLVSQGI-IKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQ 173
Y+H HRDLKP NL V++ +KI DFGLAR + T YV +RWYRAPEI+L
Sbjct: 150 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLN 207
Query: 174 SELYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQ--- 230
Y+ D+W++G IMAEL T LFPG DQ+ I ++G+P A+ L++
Sbjct: 208 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG----AELLKKISS 263
Query: 231 --ARAIKYQFPQLPRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFF 284
AR Q+P+ N + + A+ A+ L E + D KR TAA+AL H +F
Sbjct: 264 ESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 319
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 176 bits (445), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 102/296 (34%), Positives = 160/296 (54%), Gaps = 22/296 (7%)
Query: 2 DKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDC-LNLREVKCLRKLNHS 60
++Y +G GA+G V AFD TG VA+K+L + + S RE++ L+ + H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 61 NIVKLKEL------IQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGL 114
N++ L ++ ++ N +YLV M +L ++ + ++ ++ ++Q+ +GL
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRGL 138
Query: 115 SYMHQNGFFHRDLKPENLLVSQGI-IKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQ 173
Y+H HRDLKP NL V++ +KI DFGLAR + T YV +RWYRAPEI+L
Sbjct: 139 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLN 196
Query: 174 SELYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQ--- 230
Y+ D+W++G IMAEL T LFPG DQ+ I ++G+P A+ L++
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG----AELLKKISS 252
Query: 231 --ARAIKYQFPQLPRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFF 284
AR Q+P+ N + + A+ A+ L E + D KR TAA+AL H +F
Sbjct: 253 ESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 176 bits (445), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 102/296 (34%), Positives = 160/296 (54%), Gaps = 22/296 (7%)
Query: 2 DKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDC-LNLREVKCLRKLNHS 60
++Y +G GA+G V AFD TG VA+K+L + + S RE++ L+ + H
Sbjct: 29 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 88
Query: 61 NIVKLKEL------IQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGL 114
N++ L ++ ++ N +YLV M +L ++ + ++ ++ ++Q+ +GL
Sbjct: 89 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRGL 145
Query: 115 SYMHQNGFFHRDLKPENLLVSQGI-IKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQ 173
Y+H HRDLKP NL V++ +KI DFGLAR + T YV +RWYRAPEI+L
Sbjct: 146 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLN 203
Query: 174 SELYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQ--- 230
Y+ D+W++G IMAEL T LFPG DQ+ I ++G+P A+ L++
Sbjct: 204 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG----AELLKKISS 259
Query: 231 --ARAIKYQFPQLPRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFF 284
AR Q+P+ N + + A+ A+ L E + D KR TAA+AL H +F
Sbjct: 260 ESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 315
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 176 bits (445), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 100/292 (34%), Positives = 156/292 (53%), Gaps = 14/292 (4%)
Query: 2 DKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDC-LNLREVKCLRKLNHS 60
++Y +G GA+G V AFD TG VA+K+L + + S RE++ L+ + H
Sbjct: 45 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 104
Query: 61 NIVKLKEL------IQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGL 114
N++ L ++ ++ N +YLV M +L ++ + ++ ++ ++Q+ +GL
Sbjct: 105 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRGL 161
Query: 115 SYMHQNGFFHRDLKPENLLVSQGI-IKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQ 173
Y+H HRDLKP NL V++ +KI DFGLAR + T YV +RWYRAPEI+L
Sbjct: 162 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLN 219
Query: 174 SELYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWAD-GLRQAR 232
Y+ D+W++G IMAEL T LFPG DQ+ I ++G+P + AR
Sbjct: 220 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESAR 279
Query: 233 AIKYQFPQLPRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFF 284
Q+P+ N + + A+ A+ L E + D KR TAA+AL H +F
Sbjct: 280 NYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 331
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 176 bits (445), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 100/292 (34%), Positives = 156/292 (53%), Gaps = 14/292 (4%)
Query: 2 DKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDC-LNLREVKCLRKLNHS 60
++Y +G GA+G V AFD TG VA+K+L + + S RE++ L+ + H
Sbjct: 41 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 100
Query: 61 NIVKLKEL------IQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGL 114
N++ L ++ ++ N +YLV M +L ++ + ++ ++ ++Q+ +GL
Sbjct: 101 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRGL 157
Query: 115 SYMHQNGFFHRDLKPENLLVSQGI-IKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQ 173
Y+H HRDLKP NL V++ +KI DFGLAR + T YV +RWYRAPEI+L
Sbjct: 158 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLN 215
Query: 174 SELYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWAD-GLRQAR 232
Y+ D+W++G IMAEL T LFPG DQ+ I ++G+P + AR
Sbjct: 216 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESAR 275
Query: 233 AIKYQFPQLPRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFF 284
Q+P+ N + + A+ A+ L E + D KR TAA+AL H +F
Sbjct: 276 NYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 327
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 176 bits (445), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 102/296 (34%), Positives = 159/296 (53%), Gaps = 22/296 (7%)
Query: 2 DKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDC-LNLREVKCLRKLNHS 60
++Y +G GA+G V AFD TG VA+K+L + + S RE++ L+ + H
Sbjct: 18 ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 77
Query: 61 NIVKLKEL------IQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGL 114
N++ L ++ ++ N +YLV M +L ++ ++ ++ ++Q+ +GL
Sbjct: 78 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCAK---LTDDHVQFLIYQILRGL 134
Query: 115 SYMHQNGFFHRDLKPENLLVSQGI-IKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQ 173
Y+H HRDLKP NL V++ +KI DFGLAR + T YV +RWYRAPEI+L
Sbjct: 135 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLN 192
Query: 174 SELYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQ--- 230
Y+ D+W++G IMAEL T LFPG DQ+ I ++G+P A+ L++
Sbjct: 193 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG----AELLKKISS 248
Query: 231 --ARAIKYQFPQLPRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFF 284
AR Q+P+ N + + A+ A+ L E + D KR TAA+AL H +F
Sbjct: 249 ESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 304
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 176 bits (445), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 102/296 (34%), Positives = 160/296 (54%), Gaps = 22/296 (7%)
Query: 2 DKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDC-LNLREVKCLRKLNHS 60
++Y +G GA+G V AFD TG VA+K+L + + S RE++ L+ + H
Sbjct: 28 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 87
Query: 61 NIVKLKEL------IQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGL 114
N++ L ++ ++ N +YLV M +L ++ + ++ ++ ++Q+ +GL
Sbjct: 88 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRGL 144
Query: 115 SYMHQNGFFHRDLKPENLLVSQGI-IKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQ 173
Y+H HRDLKP NL V++ +KI DFGLAR + T YV +RWYRAPEI+L
Sbjct: 145 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLN 202
Query: 174 SELYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQ--- 230
Y+ D+W++G IMAEL T LFPG DQ+ I ++G+P A+ L++
Sbjct: 203 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG----AELLKKISS 258
Query: 231 --ARAIKYQFPQLPRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFF 284
AR Q+P+ N + + A+ A+ L E + D KR TAA+AL H +F
Sbjct: 259 ESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 314
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 176 bits (445), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 102/296 (34%), Positives = 160/296 (54%), Gaps = 22/296 (7%)
Query: 2 DKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDC-LNLREVKCLRKLNHS 60
++Y +G GA+G V AFD TG VA+K+L + + S RE++ L+ + H
Sbjct: 19 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 78
Query: 61 NIVKLKEL------IQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGL 114
N++ L ++ ++ N +YLV M +L ++ + ++ ++ ++Q+ +GL
Sbjct: 79 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRGL 135
Query: 115 SYMHQNGFFHRDLKPENLLVSQGI-IKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQ 173
Y+H HRDLKP NL V++ +KI DFGLAR + T YV +RWYRAPEI+L
Sbjct: 136 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLN 193
Query: 174 SELYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQ--- 230
Y+ D+W++G IMAEL T LFPG DQ+ I ++G+P A+ L++
Sbjct: 194 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG----AELLKKISS 249
Query: 231 --ARAIKYQFPQLPRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFF 284
AR Q+P+ N + + A+ A+ L E + D KR TAA+AL H +F
Sbjct: 250 ESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 305
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 176 bits (445), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 102/296 (34%), Positives = 160/296 (54%), Gaps = 22/296 (7%)
Query: 2 DKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDC-LNLREVKCLRKLNHS 60
++Y +G GA+G V AFD TG VA+K+L + + S RE++ L+ + H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 61 NIVKLKEL------IQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGL 114
N++ L ++ ++ N +YLV M +L ++ + ++ ++ ++Q+ +GL
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRGL 138
Query: 115 SYMHQNGFFHRDLKPENLLVSQGI-IKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQ 173
Y+H HRDLKP NL V++ +KI DFGLAR + T YV +RWYRAPEI+L
Sbjct: 139 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLN 196
Query: 174 SELYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQ--- 230
Y+ D+W++G IMAEL T LFPG DQ+ I ++G+P A+ L++
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG----AELLKKISS 252
Query: 231 --ARAIKYQFPQLPRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFF 284
AR Q+P+ N + + A+ A+ L E + D KR TAA+AL H +F
Sbjct: 253 ESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 176 bits (445), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 100/292 (34%), Positives = 156/292 (53%), Gaps = 14/292 (4%)
Query: 2 DKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDC-LNLREVKCLRKLNHS 60
++Y +G GA+G V AFD TG VA+K+L + + S RE++ L+ + H
Sbjct: 20 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 79
Query: 61 NIVKLKEL------IQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGL 114
N++ L ++ ++ N +YLV M +L ++ + ++ ++ ++Q+ +GL
Sbjct: 80 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRGL 136
Query: 115 SYMHQNGFFHRDLKPENLLVSQGI-IKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQ 173
Y+H HRDLKP NL V++ +KI DFGLAR + T YV +RWYRAPEI+L
Sbjct: 137 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLN 194
Query: 174 SELYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWAD-GLRQAR 232
Y+ D+W++G IMAEL T LFPG DQ+ I ++G+P + AR
Sbjct: 195 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESAR 254
Query: 233 AIKYQFPQLPRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFF 284
Q+P+ N + + A+ A+ L E + D KR TAA+AL H +F
Sbjct: 255 NYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 306
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 176 bits (445), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 102/296 (34%), Positives = 160/296 (54%), Gaps = 22/296 (7%)
Query: 2 DKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDC-LNLREVKCLRKLNHS 60
++Y +G GA+G V AFD TG VA+K+L + + S RE++ L+ + H
Sbjct: 24 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 83
Query: 61 NIVKLKEL------IQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGL 114
N++ L ++ ++ N +YLV M +L ++ + ++ ++ ++Q+ +GL
Sbjct: 84 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRGL 140
Query: 115 SYMHQNGFFHRDLKPENLLVSQGI-IKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQ 173
Y+H HRDLKP NL V++ +KI DFGLAR + T YV +RWYRAPEI+L
Sbjct: 141 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLN 198
Query: 174 SELYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQ--- 230
Y+ D+W++G IMAEL T LFPG DQ+ I ++G+P A+ L++
Sbjct: 199 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG----AELLKKISS 254
Query: 231 --ARAIKYQFPQLPRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFF 284
AR Q+P+ N + + A+ A+ L E + D KR TAA+AL H +F
Sbjct: 255 ESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 310
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 176 bits (445), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 100/292 (34%), Positives = 156/292 (53%), Gaps = 14/292 (4%)
Query: 2 DKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDC-LNLREVKCLRKLNHS 60
++Y +G GA+G V AFD TG VA+K+L + + S RE++ L+ + H
Sbjct: 42 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 101
Query: 61 NIVKLKEL------IQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGL 114
N++ L ++ ++ N +YLV M +L ++ + ++ ++ ++Q+ +GL
Sbjct: 102 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRGL 158
Query: 115 SYMHQNGFFHRDLKPENLLVSQGI-IKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQ 173
Y+H HRDLKP NL V++ +KI DFGLAR + T YV +RWYRAPEI+L
Sbjct: 159 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLN 216
Query: 174 SELYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWAD-GLRQAR 232
Y+ D+W++G IMAEL T LFPG DQ+ I ++G+P + AR
Sbjct: 217 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESAR 276
Query: 233 AIKYQFPQLPRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFF 284
Q+P+ N + + A+ A+ L E + D KR TAA+AL H +F
Sbjct: 277 NYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 328
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 176 bits (445), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 102/296 (34%), Positives = 160/296 (54%), Gaps = 22/296 (7%)
Query: 2 DKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDC-LNLREVKCLRKLNHS 60
++Y +G GA+G V AFD TG VA+K+L + + S RE++ L+ + H
Sbjct: 18 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 77
Query: 61 NIVKLKEL------IQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGL 114
N++ L ++ ++ N +YLV M +L ++ + ++ ++ ++Q+ +GL
Sbjct: 78 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRGL 134
Query: 115 SYMHQNGFFHRDLKPENLLVSQGI-IKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQ 173
Y+H HRDLKP NL V++ +KI DFGLAR + T YV +RWYRAPEI+L
Sbjct: 135 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLN 192
Query: 174 SELYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQ--- 230
Y+ D+W++G IMAEL T LFPG DQ+ I ++G+P A+ L++
Sbjct: 193 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG----AELLKKISS 248
Query: 231 --ARAIKYQFPQLPRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFF 284
AR Q+P+ N + + A+ A+ L E + D KR TAA+AL H +F
Sbjct: 249 ESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 304
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 175 bits (444), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 102/296 (34%), Positives = 160/296 (54%), Gaps = 22/296 (7%)
Query: 2 DKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDC-LNLREVKCLRKLNHS 60
++Y +G GA+G V AFD TG VA+K+L + + S RE++ L+ + H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 61 NIVKLKEL------IQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGL 114
N++ L ++ ++ N +YLV M +L ++ + ++ ++ ++Q+ +GL
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRGL 138
Query: 115 SYMHQNGFFHRDLKPENLLVSQGI-IKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQ 173
Y+H HRDLKP NL V++ +KI DFGLAR + T YV +RWYRAPEI+L
Sbjct: 139 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLN 196
Query: 174 SELYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQ--- 230
Y+ D+W++G IMAEL T LFPG DQ+ I ++G+P A+ L++
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG----AELLKKISS 252
Query: 231 --ARAIKYQFPQLPRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFF 284
AR Q+P+ N + + A+ A+ L E + D KR TAA+AL H +F
Sbjct: 253 ESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 175 bits (444), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 102/296 (34%), Positives = 160/296 (54%), Gaps = 22/296 (7%)
Query: 2 DKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDC-LNLREVKCLRKLNHS 60
++Y +G GA+G V AFD TG VA+K+L + + S RE++ L+ + H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 61 NIVKLKEL------IQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGL 114
N++ L ++ ++ N +YLV M +L ++ + ++ ++ ++Q+ +GL
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRGL 138
Query: 115 SYMHQNGFFHRDLKPENLLVSQGI-IKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQ 173
Y+H HRDLKP NL V++ +KI DFGLAR + T YV +RWYRAPEI+L
Sbjct: 139 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLN 196
Query: 174 SELYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQ--- 230
Y+ D+W++G IMAEL T LFPG DQ+ I ++G+P A+ L++
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG----AELLKKISS 252
Query: 231 --ARAIKYQFPQLPRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFF 284
AR Q+P+ N + + A+ A+ L E + D KR TAA+AL H +F
Sbjct: 253 ESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 175 bits (444), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 102/296 (34%), Positives = 160/296 (54%), Gaps = 22/296 (7%)
Query: 2 DKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDC-LNLREVKCLRKLNHS 60
++Y +G GA+G V AFD TG VA+K+L + + S RE++ L+ + H
Sbjct: 24 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 83
Query: 61 NIVKLKEL------IQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGL 114
N++ L ++ ++ N +YLV M +L ++ + ++ ++ ++Q+ +GL
Sbjct: 84 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRGL 140
Query: 115 SYMHQNGFFHRDLKPENLLVSQGI-IKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQ 173
Y+H HRDLKP NL V++ +KI DFGLAR + T YV +RWYRAPEI+L
Sbjct: 141 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLN 198
Query: 174 SELYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQ--- 230
Y+ D+W++G IMAEL T LFPG DQ+ I ++G+P A+ L++
Sbjct: 199 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG----AELLKKISS 254
Query: 231 --ARAIKYQFPQLPRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFF 284
AR Q+P+ N + + A+ A+ L E + D KR TAA+AL H +F
Sbjct: 255 ESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 310
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 175 bits (444), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 102/296 (34%), Positives = 160/296 (54%), Gaps = 22/296 (7%)
Query: 2 DKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDC-LNLREVKCLRKLNHS 60
++Y +G GA+G V AFD TG VA+K+L + + S RE++ L+ + H
Sbjct: 28 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 87
Query: 61 NIVKLKEL------IQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGL 114
N++ L ++ ++ N +YLV M +L ++ + ++ ++ ++Q+ +GL
Sbjct: 88 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRGL 144
Query: 115 SYMHQNGFFHRDLKPENLLVSQGI-IKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQ 173
Y+H HRDLKP NL V++ +KI DFGLAR + T YV +RWYRAPEI+L
Sbjct: 145 KYIHSADIIHRDLKPSNLAVNEDSELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLN 202
Query: 174 SELYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQ--- 230
Y+ D+W++G IMAEL T LFPG DQ+ I ++G+P A+ L++
Sbjct: 203 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG----AELLKKISS 258
Query: 231 --ARAIKYQFPQLPRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFF 284
AR Q+P+ N + + A+ A+ L E + D KR TAA+AL H +F
Sbjct: 259 ESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 314
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 175 bits (444), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 102/296 (34%), Positives = 160/296 (54%), Gaps = 22/296 (7%)
Query: 2 DKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDC-LNLREVKCLRKLNHS 60
++Y +G GA+G V AFD TG VA+K+L + + S RE++ L+ + H
Sbjct: 19 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 78
Query: 61 NIVKLKEL------IQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGL 114
N++ L ++ ++ N +YLV M +L ++ + ++ ++ ++Q+ +GL
Sbjct: 79 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRGL 135
Query: 115 SYMHQNGFFHRDLKPENLLVSQGI-IKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQ 173
Y+H HRDLKP NL V++ +KI DFGLAR + T YV +RWYRAPEI+L
Sbjct: 136 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLN 193
Query: 174 SELYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQ--- 230
Y+ D+W++G IMAEL T LFPG DQ+ I ++G+P A+ L++
Sbjct: 194 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG----AELLKKISS 249
Query: 231 --ARAIKYQFPQLPRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFF 284
AR Q+P+ N + + A+ A+ L E + D KR TAA+AL H +F
Sbjct: 250 ESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 305
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 175 bits (444), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 102/296 (34%), Positives = 160/296 (54%), Gaps = 22/296 (7%)
Query: 2 DKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDC-LNLREVKCLRKLNHS 60
++Y +G GA+G V AFD TG VA+K+L + + S RE++ L+ + H
Sbjct: 24 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 83
Query: 61 NIVKLKEL------IQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGL 114
N++ L ++ ++ N +YLV M +L ++ + ++ ++ ++Q+ +GL
Sbjct: 84 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRGL 140
Query: 115 SYMHQNGFFHRDLKPENLLVSQGI-IKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQ 173
Y+H HRDLKP NL V++ +KI DFGLAR + T YV +RWYRAPEI+L
Sbjct: 141 KYIHSADIIHRDLKPSNLAVNEDSELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLN 198
Query: 174 SELYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQ--- 230
Y+ D+W++G IMAEL T LFPG DQ+ I ++G+P A+ L++
Sbjct: 199 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG----AELLKKISS 254
Query: 231 --ARAIKYQFPQLPRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFF 284
AR Q+P+ N + + A+ A+ L E + D KR TAA+AL H +F
Sbjct: 255 ESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 310
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 175 bits (443), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 99/293 (33%), Positives = 164/293 (55%), Gaps = 14/293 (4%)
Query: 3 KYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCL-NLREVKCLRKLNHSN 61
+ G + +G GA+G V A+D + VA+K+L + + S RE++ L+ L H N
Sbjct: 29 RLQGLRPVGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHEN 88
Query: 62 IVKLKEL------IQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLS 115
++ L ++ I++ + +YLV M +L ++ + + S+ ++ ++Q+ +GL
Sbjct: 89 VIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKS---QALSDEHVQFLVYQLLRGLK 145
Query: 116 YMHQNGFFHRDLKPENLLVSQGI-IKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQS 174
Y+H G HRDLKP N+ V++ ++I DFGLAR+ + T YV +RWYRAPEI+L
Sbjct: 146 YIHSAGIIHRDLKPSNVAVNEDSELRILDFGLARQ--ADEEMTGYVATRWYRAPEIMLNW 203
Query: 175 ELYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWAD-GLRQARA 233
Y+ D+W++G IMAEL LFPG+ DQ+ +I V+G+P+ + A AR
Sbjct: 204 MHYNQTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVGTPSPEVLAKISSEHART 263
Query: 234 IKYQFPQLPRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFFKR 286
P +P+ +LS++ A+ AI L + D +R +AAEAL H +F +
Sbjct: 264 YIQSLPPMPQKDLSSIFRGANPLAIDLLGRMLVLDSDQRVSAAEALAHAYFSQ 316
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 175 bits (443), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 107/296 (36%), Positives = 160/296 (54%), Gaps = 18/296 (6%)
Query: 3 KYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCL---NLREVKCLRKLN- 58
+Y E+G GA+G V++A D H+G VA+K + R + E+ L +REV LR+L
Sbjct: 5 RYEPVAEIGVGAYGTVYKARDPHSGHFVALKSV--RVPNGEEGLPISTVREVALLRRLEA 62
Query: 59 --HSNIVKLKELIQNNN-----RLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVF 111
H N+V+L ++ + ++ LVFE ++ +L + IK + Q
Sbjct: 63 FEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFL 122
Query: 112 QGLSYMHQNGFFHRDLKPENLLV-SQGIIKIADFGLAREIKSGPPYTNYVGSRWYRAPEI 170
+GL ++H N HRDLKPEN+LV S G +K+ADFGLAR V + WYRAPE+
Sbjct: 123 RGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALAPVVVTLWYRAPEV 182
Query: 171 LLQSELYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQ 230
LLQS Y++ DMW++G I AE+F PLF G SEADQ+ KI ++G P D W +
Sbjct: 183 LLQST-YATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVSL 241
Query: 231 ARAIKYQFPQLPRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFFKR 286
R FP + +++P + L + +++P KR +A ALQH + +
Sbjct: 242 PRG---AFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSYLHK 294
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 174 bits (442), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 107/296 (36%), Positives = 160/296 (54%), Gaps = 18/296 (6%)
Query: 3 KYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCL---NLREVKCLRKLN- 58
+Y E+G GA+G V++A D H+G VA+K + R + E+ L +REV LR+L
Sbjct: 5 RYEPVAEIGVGAYGTVYKARDPHSGHFVALKSV--RVPNGEEGLPISTVREVALLRRLEA 62
Query: 59 --HSNIVKLKELIQNNN-----RLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVF 111
H N+V+L ++ + ++ LVFE ++ +L + IK + Q
Sbjct: 63 FEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFL 122
Query: 112 QGLSYMHQNGFFHRDLKPENLLV-SQGIIKIADFGLAREIKSGPPYTNYVGSRWYRAPEI 170
+GL ++H N HRDLKPEN+LV S G +K+ADFGLAR V + WYRAPE+
Sbjct: 123 RGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALDPVVVTLWYRAPEV 182
Query: 171 LLQSELYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQ 230
LLQS Y++ DMW++G I AE+F PLF G SEADQ+ KI ++G P D W +
Sbjct: 183 LLQST-YATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVSL 241
Query: 231 ARAIKYQFPQLPRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFFKR 286
R FP + +++P + L + +++P KR +A ALQH + +
Sbjct: 242 PRG---AFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSYLHK 294
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 174 bits (442), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 97/294 (32%), Positives = 160/294 (54%), Gaps = 14/294 (4%)
Query: 2 DKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDC-LNLREVKCLRKLNHS 60
++Y +G GA+G V ++D +G +A+K+L + + S RE++ L+ + H
Sbjct: 51 ERYQTLSPVGSGAYGSVCSSYDVKSGLKIAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 110
Query: 61 NIVKLKEL------IQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGL 114
N++ L ++ ++ N +YLV M +L ++ + ++ ++ ++Q+ +GL
Sbjct: 111 NVIGLLDVFTPATSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRGL 167
Query: 115 SYMHQNGFFHRDLKPENLLVSQGI-IKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQ 173
Y+H HRDLKP NL V++ +KI DFGLAR + T YV +RWYRAPEI+L
Sbjct: 168 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLN 225
Query: 174 SELYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWAD-GLRQAR 232
Y+ D+W++G IMAEL T LFPG +Q+ +I + G+P + +AR
Sbjct: 226 WMHYNMTVDIWSVGCIMAELLTGRTLFPGTDHINQLQQIMRLTGTPPASVISRMPSHEAR 285
Query: 233 AIKYQFPQLPRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFFKR 286
PQ+P+ N + + A+ A+ L E + D KR TA+EAL HP+F +
Sbjct: 286 NYINSLPQMPKRNFADVFIGANPLAVDLLEKMLVLDTDKRITASEALAHPYFSQ 339
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 174 bits (442), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 101/292 (34%), Positives = 165/292 (56%), Gaps = 18/292 (6%)
Query: 4 YSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLNLREVKCLRKLNHSNIV 63
Y+ K +G G+FG V+QA +GE VAIK++ Q A RE++ +RKL+H NIV
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKA-----FKNRELQIMRKLDHCNIV 76
Query: 64 KLKELIQNNNR------LYLVFECMECNLYQLMAARDRKLFSEPEI--KAWLFQVFQGLS 115
+L+ ++ L LV + + +Y++ R + P I K +++Q+F+ L+
Sbjct: 77 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 136
Query: 116 YMHQNGFFHRDLKPENLLVS--QGIIKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQ 173
Y+H G HRD+KP+NLL+ ++K+ DFG A+++ G P +Y+ SR+YRAPE++
Sbjct: 137 YIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFG 196
Query: 174 SELYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQARA 233
+ Y+S D+W+ G ++AEL P+FPG S DQ+ +I VLG+PT + +
Sbjct: 197 ATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIRE--MNPNY 254
Query: 234 IKYQFPQLPRANLSALM-PSASQDAISLFESLCSWDPSKRPTAAEALQHPFF 284
+++FPQ+ + + P +AI+L L + P+ R T EA H FF
Sbjct: 255 TEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFF 306
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 174 bits (442), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 101/296 (34%), Positives = 160/296 (54%), Gaps = 22/296 (7%)
Query: 2 DKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDC-LNLREVKCLRKLNHS 60
++Y +G GA+G V AFD TG VA+K+L + + S RE++ L+ + H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 61 NIVKLKEL------IQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGL 114
N++ L ++ ++ N +YLV M +L ++ + ++ ++ ++Q+ +GL
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRGL 138
Query: 115 SYMHQNGFFHRDLKPENLLVSQGI-IKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQ 173
Y+H HRDLKP NL V++ +KI D+GLAR + T YV +RWYRAPEI+L
Sbjct: 139 KYIHSADIIHRDLKPSNLAVNEDCELKILDYGLARH--TDDEMTGYVATRWYRAPEIMLN 196
Query: 174 SELYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQ--- 230
Y+ D+W++G IMAEL T LFPG DQ+ I ++G+P A+ L++
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG----AELLKKISS 252
Query: 231 --ARAIKYQFPQLPRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFF 284
AR Q+P+ N + + A+ A+ L E + D KR TAA+AL H +F
Sbjct: 253 ESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 174 bits (442), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 99/293 (33%), Positives = 163/293 (55%), Gaps = 14/293 (4%)
Query: 3 KYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCL-NLREVKCLRKLNHSN 61
+ G + +G GA+G V A+D + VA+K+L + + S RE++ L+ L H N
Sbjct: 21 RLQGLRPVGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHEN 80
Query: 62 IVKLKEL------IQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLS 115
++ L ++ I++ + +YLV M +L ++ + S+ ++ ++Q+ +GL
Sbjct: 81 VIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKC---QALSDEHVQFLVYQLLRGLK 137
Query: 116 YMHQNGFFHRDLKPENLLVSQGI-IKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQS 174
Y+H G HRDLKP N+ V++ ++I DFGLAR+ + T YV +RWYRAPEI+L
Sbjct: 138 YIHSAGIIHRDLKPSNVAVNEDCELRILDFGLARQ--ADEEMTGYVATRWYRAPEIMLNW 195
Query: 175 ELYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWAD-GLRQARA 233
Y+ D+W++G IMAEL LFPG+ DQ+ +I V+G+P+ + A AR
Sbjct: 196 MHYNQTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVGTPSPEVLAKISSEHART 255
Query: 234 IKYQFPQLPRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFFKR 286
P +P+ +LS++ A+ AI L + D +R +AAEAL H +F +
Sbjct: 256 YIQSLPPMPQKDLSSIFRGANPLAIDLLGRMLVLDSDQRVSAAEALAHAYFSQ 308
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 174 bits (441), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 101/293 (34%), Positives = 166/293 (56%), Gaps = 20/293 (6%)
Query: 4 YSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLNLREVKCLRKLNHSNIV 63
Y+ K +G G+FG V+QA +GE VAIK++ Q + RE++ +RKL+H NIV
Sbjct: 101 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKNRELQIMRKLDHCNIV 155
Query: 64 KLKELIQNNNR------LYLVFECMECNLYQLMAARDRKLFSEPEI--KAWLFQVFQGLS 115
+L+ ++ L LV + + +Y++ R + P I K +++Q+F+ L+
Sbjct: 156 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 215
Query: 116 YMHQNGFFHRDLKPENLLVS--QGIIKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQ 173
Y+H G HRD+KP+NLL+ ++K+ DFG A+++ G P +Y+ SR+YRAPE++
Sbjct: 216 YIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFG 275
Query: 174 SELYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQARA 233
+ Y+S D+W+ G ++AEL P+FPG S DQ+ +I VLG+PT + +
Sbjct: 276 ATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIRE--MNPNY 333
Query: 234 IKYQFPQLPRAN--LSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFF 284
+++FPQ+ +A+ P +AI+L L + P+ R T EA H FF
Sbjct: 334 TEFKFPQI-KAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFF 385
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 174 bits (441), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 101/293 (34%), Positives = 166/293 (56%), Gaps = 20/293 (6%)
Query: 4 YSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLNLREVKCLRKLNHSNIV 63
Y+ K +G G+FG V+QA +GE VAIK++ Q + RE++ +RKL+H NIV
Sbjct: 56 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKNRELQIMRKLDHCNIV 110
Query: 64 KLKELIQNNNR------LYLVFECMECNLYQLMAARDRKLFSEPEI--KAWLFQVFQGLS 115
+L+ ++ L LV + + +Y++ R + P I K +++Q+F+ L+
Sbjct: 111 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 170
Query: 116 YMHQNGFFHRDLKPENLLVS--QGIIKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQ 173
Y+H G HRD+KP+NLL+ ++K+ DFG A+++ G P +Y+ SR+YRAPE++
Sbjct: 171 YIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFG 230
Query: 174 SELYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQARA 233
+ Y+S D+W+ G ++AEL P+FPG S DQ+ +I VLG+PT + +
Sbjct: 231 ATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIRE--MNPNY 288
Query: 234 IKYQFPQLPRAN--LSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFF 284
+++FPQ+ +A+ P +AI+L L + P+ R T EA H FF
Sbjct: 289 TEFKFPQI-KAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFF 340
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 174 bits (441), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 101/293 (34%), Positives = 166/293 (56%), Gaps = 20/293 (6%)
Query: 4 YSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLNLREVKCLRKLNHSNIV 63
Y+ K +G G+FG V+QA +GE VAIK++ Q + RE++ +RKL+H NIV
Sbjct: 35 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKNRELQIMRKLDHCNIV 89
Query: 64 KLKELIQNNNR------LYLVFECMECNLYQLMAARDRKLFSEPEI--KAWLFQVFQGLS 115
+L+ ++ L LV + + +Y++ R + P I K +++Q+F+ L+
Sbjct: 90 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 149
Query: 116 YMHQNGFFHRDLKPENLLVS--QGIIKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQ 173
Y+H G HRD+KP+NLL+ ++K+ DFG A+++ G P +Y+ SR+YRAPE++
Sbjct: 150 YIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFG 209
Query: 174 SELYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQARA 233
+ Y+S D+W+ G ++AEL P+FPG S DQ+ +I VLG+PT + +
Sbjct: 210 ATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIRE--MNPNY 267
Query: 234 IKYQFPQLPRAN--LSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFF 284
+++FPQ+ +A+ P +AI+L L + P+ R T EA H FF
Sbjct: 268 TEFKFPQI-KAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFF 319
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 174 bits (441), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 101/293 (34%), Positives = 166/293 (56%), Gaps = 20/293 (6%)
Query: 4 YSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLNLREVKCLRKLNHSNIV 63
Y+ K +G G+FG V+QA +GE VAIK++ Q + RE++ +RKL+H NIV
Sbjct: 58 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKNRELQIMRKLDHCNIV 112
Query: 64 KLKELIQNNNR------LYLVFECMECNLYQLMAARDRKLFSEPEI--KAWLFQVFQGLS 115
+L+ ++ L LV + + +Y++ R + P I K +++Q+F+ L+
Sbjct: 113 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 172
Query: 116 YMHQNGFFHRDLKPENLLVS--QGIIKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQ 173
Y+H G HRD+KP+NLL+ ++K+ DFG A+++ G P +Y+ SR+YRAPE++
Sbjct: 173 YIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFG 232
Query: 174 SELYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQARA 233
+ Y+S D+W+ G ++AEL P+FPG S DQ+ +I VLG+PT + +
Sbjct: 233 ATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIRE--MNPNY 290
Query: 234 IKYQFPQLPRAN--LSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFF 284
+++FPQ+ +A+ P +AI+L L + P+ R T EA H FF
Sbjct: 291 TEFKFPQI-KAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFF 342
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 174 bits (441), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 99/293 (33%), Positives = 163/293 (55%), Gaps = 14/293 (4%)
Query: 3 KYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCL-NLREVKCLRKLNHSN 61
+ G + +G GA+G V A+D + VA+K+L + + S RE++ L+ L H N
Sbjct: 29 RLQGLRPVGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHEN 88
Query: 62 IVKLKEL------IQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLS 115
++ L ++ I++ + +YLV M +L ++ + S+ ++ ++Q+ +GL
Sbjct: 89 VIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKC---QALSDEHVQFLVYQLLRGLK 145
Query: 116 YMHQNGFFHRDLKPENLLVSQGI-IKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQS 174
Y+H G HRDLKP N+ V++ ++I DFGLAR+ + T YV +RWYRAPEI+L
Sbjct: 146 YIHSAGIIHRDLKPSNVAVNEDSELRILDFGLARQ--ADEEMTGYVATRWYRAPEIMLNW 203
Query: 175 ELYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWAD-GLRQARA 233
Y+ D+W++G IMAEL LFPG+ DQ+ +I V+G+P+ + A AR
Sbjct: 204 MHYNQTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVGTPSPEVLAKISSEHART 263
Query: 234 IKYQFPQLPRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFFKR 286
P +P+ +LS++ A+ AI L + D +R +AAEAL H +F +
Sbjct: 264 YIQSLPPMPQKDLSSIFRGANPLAIDLLGRMLVLDSDQRVSAAEALAHAYFSQ 316
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 174 bits (441), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 101/296 (34%), Positives = 160/296 (54%), Gaps = 22/296 (7%)
Query: 2 DKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDC-LNLREVKCLRKLNHS 60
++Y +G GA+G V AFD TG VA+K+L + + S RE++ L+ + H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 61 NIVKLKEL------IQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGL 114
N++ L ++ ++ N +YLV M +L ++ ++ ++ ++ ++Q+ +GL
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKSQK---LTDDHVQFLIYQILRGL 138
Query: 115 SYMHQNGFFHRDLKPENLLVSQGI-IKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQ 173
Y+H HRDLKP NL V++ +KI DFGL R + T YV +RWYRAPEI+L
Sbjct: 139 KYIHSADIIHRDLKPSNLAVNEDSELKILDFGLCRH--TDDEMTGYVATRWYRAPEIMLN 196
Query: 174 SELYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQ--- 230
Y+ D+W++G IMAEL T LFPG DQ+ I ++G+P A+ L++
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG----AELLKKISS 252
Query: 231 --ARAIKYQFPQLPRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFF 284
AR Q+P+ N + + A+ A+ L E + D KR TAA+AL H +F
Sbjct: 253 ESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 174 bits (441), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 101/293 (34%), Positives = 166/293 (56%), Gaps = 20/293 (6%)
Query: 4 YSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLNLREVKCLRKLNHSNIV 63
Y+ K +G G+FG V+QA +GE VAIK++ Q + RE++ +RKL+H NIV
Sbjct: 27 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKNRELQIMRKLDHCNIV 81
Query: 64 KLKELIQNNNR------LYLVFECMECNLYQLMAARDRKLFSEPEI--KAWLFQVFQGLS 115
+L+ ++ L LV + + +Y++ R + P I K +++Q+F+ L+
Sbjct: 82 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 141
Query: 116 YMHQNGFFHRDLKPENLLVS--QGIIKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQ 173
Y+H G HRD+KP+NLL+ ++K+ DFG A+++ G P +Y+ SR+YRAPE++
Sbjct: 142 YIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFG 201
Query: 174 SELYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQARA 233
+ Y+S D+W+ G ++AEL P+FPG S DQ+ +I VLG+PT + +
Sbjct: 202 ATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIRE--MNPNY 259
Query: 234 IKYQFPQLPRAN--LSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFF 284
+++FPQ+ +A+ P +AI+L L + P+ R T EA H FF
Sbjct: 260 TEFKFPQI-KAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFF 311
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 174 bits (441), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 101/293 (34%), Positives = 166/293 (56%), Gaps = 20/293 (6%)
Query: 4 YSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLNLREVKCLRKLNHSNIV 63
Y+ K +G G+FG V+QA +GE VAIK++ Q + RE++ +RKL+H NIV
Sbjct: 50 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKNRELQIMRKLDHCNIV 104
Query: 64 KLKELIQNNNR------LYLVFECMECNLYQLMAARDRKLFSEPEI--KAWLFQVFQGLS 115
+L+ ++ L LV + + +Y++ R + P I K +++Q+F+ L+
Sbjct: 105 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 164
Query: 116 YMHQNGFFHRDLKPENLLVS--QGIIKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQ 173
Y+H G HRD+KP+NLL+ ++K+ DFG A+++ G P +Y+ SR+YRAPE++
Sbjct: 165 YIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFG 224
Query: 174 SELYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQARA 233
+ Y+S D+W+ G ++AEL P+FPG S DQ+ +I VLG+PT + +
Sbjct: 225 ATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIRE--MNPNY 282
Query: 234 IKYQFPQLPRAN--LSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFF 284
+++FPQ+ +A+ P +AI+L L + P+ R T EA H FF
Sbjct: 283 TEFKFPQI-KAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFF 334
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 174 bits (440), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 101/293 (34%), Positives = 166/293 (56%), Gaps = 20/293 (6%)
Query: 4 YSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLNLREVKCLRKLNHSNIV 63
Y+ K +G G+FG V+QA +GE VAIK++ Q + RE++ +RKL+H NIV
Sbjct: 60 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKNRELQIMRKLDHCNIV 114
Query: 64 KLKELIQNNNR------LYLVFECMECNLYQLMAARDRKLFSEPEI--KAWLFQVFQGLS 115
+L+ ++ L LV + + +Y++ R + P I K +++Q+F+ L+
Sbjct: 115 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 174
Query: 116 YMHQNGFFHRDLKPENLLVS--QGIIKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQ 173
Y+H G HRD+KP+NLL+ ++K+ DFG A+++ G P +Y+ SR+YRAPE++
Sbjct: 175 YIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFG 234
Query: 174 SELYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQARA 233
+ Y+S D+W+ G ++AEL P+FPG S DQ+ +I VLG+PT + +
Sbjct: 235 ATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIRE--MNPNY 292
Query: 234 IKYQFPQLPRAN--LSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFF 284
+++FPQ+ +A+ P +AI+L L + P+ R T EA H FF
Sbjct: 293 TEFKFPQI-KAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFF 344
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 174 bits (440), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 107/296 (36%), Positives = 160/296 (54%), Gaps = 18/296 (6%)
Query: 3 KYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCL---NLREVKCLRKLN- 58
+Y E+G GA+G V++A D H+G VA+K + R + E+ L +REV LR+L
Sbjct: 5 RYEPVAEIGVGAYGTVYKARDPHSGHFVALKSV--RVPNGEEGLPISTVREVALLRRLEA 62
Query: 59 --HSNIVKLKELIQNNN-----RLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVF 111
H N+V+L ++ + ++ LVFE ++ +L + IK + Q
Sbjct: 63 FEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFL 122
Query: 112 QGLSYMHQNGFFHRDLKPENLLV-SQGIIKIADFGLAREIKSGPPYTNYVGSRWYRAPEI 170
+GL ++H N HRDLKPEN+LV S G +K+ADFGLAR V + WYRAPE+
Sbjct: 123 RGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALFPVVVTLWYRAPEV 182
Query: 171 LLQSELYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQ 230
LLQS Y++ DMW++G I AE+F PLF G SEADQ+ KI ++G P D W +
Sbjct: 183 LLQST-YATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVSL 241
Query: 231 ARAIKYQFPQLPRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFFKR 286
R FP + +++P + L + +++P KR +A ALQH + +
Sbjct: 242 PRG---AFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSYLHK 294
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 174 bits (440), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 100/292 (34%), Positives = 165/292 (56%), Gaps = 18/292 (6%)
Query: 4 YSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLNLREVKCLRKLNHSNIV 63
Y+ K +G G+FG V+QA +GE VAIK++ Q + RE++ +RKL+H NIV
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKNRELQIMRKLDHCNIV 76
Query: 64 KLKELIQNNNR------LYLVFECMECNLYQLMAARDRKLFSEPEI--KAWLFQVFQGLS 115
+L+ ++ L LV + + +Y++ R + P I K +++Q+F+ L+
Sbjct: 77 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 136
Query: 116 YMHQNGFFHRDLKPENLLVS--QGIIKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQ 173
Y+H G HRD+KP+NLL+ ++K+ DFG A+++ G P +Y+ SR+YRAPE++
Sbjct: 137 YIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFG 196
Query: 174 SELYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQARA 233
+ Y+S D+W+ G ++AEL P+FPG S DQ+ +I VLG+PT + +
Sbjct: 197 ATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIRE--MNPNY 254
Query: 234 IKYQFPQLPRANLSALM-PSASQDAISLFESLCSWDPSKRPTAAEALQHPFF 284
+++FPQ+ + + P +AI+L L + P+ R T EA H FF
Sbjct: 255 TEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFF 306
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 174 bits (440), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 101/292 (34%), Positives = 164/292 (56%), Gaps = 18/292 (6%)
Query: 4 YSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLNLREVKCLRKLNHSNIV 63
Y+ K +G G+FG V+QA +GE VAIK++ Q A RE++ +RKL+H NIV
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKA-----FKNRELQIMRKLDHCNIV 76
Query: 64 KLKELIQNNNR------LYLVFECMECNLYQLMAARDRKLFSEPEI--KAWLFQVFQGLS 115
+L+ ++ L LV + + +Y++ R + P I K +++Q+F+ L+
Sbjct: 77 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 136
Query: 116 YMHQNGFFHRDLKPENLLVS--QGIIKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQ 173
Y+H G HRD+KP+NLL+ ++K+ DFG A+++ G P +Y+ SR+YRAPE++
Sbjct: 137 YIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFG 196
Query: 174 SELYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQARA 233
+ Y+S D+W+ G ++AEL P+FPG S DQ+ +I VLG+PT + +
Sbjct: 197 ATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIRE--MNPNY 254
Query: 234 IKYQFPQLPRANLSALM-PSASQDAISLFESLCSWDPSKRPTAAEALQHPFF 284
++ FPQ+ + + P +AI+L L + P+ R T EA H FF
Sbjct: 255 TEFAFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFF 306
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 173 bits (439), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 101/296 (34%), Positives = 159/296 (53%), Gaps = 22/296 (7%)
Query: 2 DKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDC-LNLREVKCLRKLNHS 60
++Y +G GA+G V AFD TG VA+K+L + + S RE++ L+ + H
Sbjct: 45 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 104
Query: 61 NIVKLKEL------IQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGL 114
N++ L ++ ++ N +YLV M +L ++ + ++ ++ ++Q+ +GL
Sbjct: 105 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRGL 161
Query: 115 SYMHQNGFFHRDLKPENLLVSQGI-IKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQ 173
Y+H HRDLKP NL V++ +KI DFGLAR + YV +RWYRAPEI+L
Sbjct: 162 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEMXGYVATRWYRAPEIMLN 219
Query: 174 SELYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQ--- 230
Y+ D+W++G IMAEL T LFPG DQ+ I ++G+P A+ L++
Sbjct: 220 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG----AELLKKISS 275
Query: 231 --ARAIKYQFPQLPRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFF 284
AR Q+P+ N + + A+ A+ L E + D KR TAA+AL H +F
Sbjct: 276 ESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 331
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 173 bits (438), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 105/297 (35%), Positives = 157/297 (52%), Gaps = 17/297 (5%)
Query: 3 KYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELK----QRYASWEDCLNLREVKCLRKLN 58
+Y E+G GA+G V++A D H+G VA+K ++ +REV LR+L
Sbjct: 10 RYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLE 69
Query: 59 ---HSNIVKLKELIQNNN-----RLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQV 110
H N+V+L ++ + ++ LVFE ++ +L + IK + Q
Sbjct: 70 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQF 129
Query: 111 FQGLSYMHQNGFFHRDLKPENLLV-SQGIIKIADFGLAREIKSGPPYTNYVGSRWYRAPE 169
+GL ++H N HRDLKPEN+LV S G +K+ADFGLAR T V + WYRAPE
Sbjct: 130 LRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALTPVVVTLWYRAPE 189
Query: 170 ILLQSELYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLR 229
+LLQS Y++ DMW++G I AE+F PLF G SEADQ+ KI ++G P D W +
Sbjct: 190 VLLQST-YATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVS 248
Query: 230 QARAIKYQFPQLPRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFFKR 286
R FP + +++P + L + +++P KR +A ALQH + +
Sbjct: 249 LPRG---AFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSYLHK 302
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 173 bits (438), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 101/296 (34%), Positives = 159/296 (53%), Gaps = 22/296 (7%)
Query: 2 DKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDC-LNLREVKCLRKLNHS 60
++Y +G GA+G V AFD TG VA+K+L + + S RE++ L+ + H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 61 NIVKLKEL------IQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGL 114
N++ L ++ ++ N +YLV M +L ++ + ++ ++ ++Q+ +GL
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRGL 138
Query: 115 SYMHQNGFFHRDLKPENLLVSQGI-IKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQ 173
Y+H HRDLKP NL V++ +KI DF LAR + T YV +RWYRAPEI+L
Sbjct: 139 KYIHSADIIHRDLKPSNLAVNEDCELKILDFYLARH--TDDEMTGYVATRWYRAPEIMLN 196
Query: 174 SELYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQ--- 230
Y+ D+W++G IMAEL T LFPG DQ+ I ++G+P A+ L++
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG----AELLKKISS 252
Query: 231 --ARAIKYQFPQLPRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFF 284
AR Q+P+ N + + A+ A+ L E + D KR TAA+AL H +F
Sbjct: 253 ESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 173 bits (438), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 100/296 (33%), Positives = 159/296 (53%), Gaps = 22/296 (7%)
Query: 2 DKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDC-LNLREVKCLRKLNHS 60
++Y +G GA+G V AFD TG VA+K+L + + S RE++ L+ + H
Sbjct: 18 ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 77
Query: 61 NIVKLKEL------IQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGL 114
N++ L ++ ++ N +YLV M +L ++ + ++ ++ ++Q+ +GL
Sbjct: 78 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRGL 134
Query: 115 SYMHQNGFFHRDLKPENLLVSQGI-IKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQ 173
Y+H HRDLKP NL V++ +KI DFGLAR + +V +RWYRAPEI+L
Sbjct: 135 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEMAGFVATRWYRAPEIMLN 192
Query: 174 SELYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQ--- 230
Y+ D+W++G IMAEL T LFPG DQ+ I ++G+P A+ L++
Sbjct: 193 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG----AELLKKISS 248
Query: 231 --ARAIKYQFPQLPRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFF 284
AR Q+P+ N + + A+ A+ L E + D KR TAA+AL H +F
Sbjct: 249 ESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 304
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 173 bits (438), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 100/296 (33%), Positives = 159/296 (53%), Gaps = 22/296 (7%)
Query: 2 DKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDC-LNLREVKCLRKLNHS 60
++Y +G GA+G V AFD TG VA+K+L + + S RE++ L+ + H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 61 NIVKLKEL------IQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGL 114
N++ L ++ ++ N +YLV M +L ++ + ++ ++ ++Q+ +GL
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRGL 138
Query: 115 SYMHQNGFFHRDLKPENLLVSQGI-IKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQ 173
Y+H HRDLKP NL V++ +KI DFGLAR + +V +RWYRAPEI+L
Sbjct: 139 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEMAGFVATRWYRAPEIMLN 196
Query: 174 SELYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQ--- 230
Y+ D+W++G IMAEL T LFPG DQ+ I ++G+P A+ L++
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG----AELLKKISS 252
Query: 231 --ARAIKYQFPQLPRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFF 284
AR Q+P+ N + + A+ A+ L E + D KR TAA+AL H +F
Sbjct: 253 ESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 173 bits (438), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 104/292 (35%), Positives = 161/292 (55%), Gaps = 19/292 (6%)
Query: 4 YSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLNLREVKCLRKLNHSNIV 63
Y+ K +G G+FG VFQA + E VAIK++ Q + RE++ +R + H N+V
Sbjct: 42 YTNCKVIGNGSFGVVFQAKLVESDE-VAIKKVLQ-----DKRFKNRELQIMRIVKHPNVV 95
Query: 64 KLKELIQNNNR------LYLVFECMECNLYQL--MAARDRKLFSEPEIKAWLFQVFQGLS 115
LK +N L LV E + +Y+ A+ ++ IK +++Q+ + L+
Sbjct: 96 DLKAFFYSNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLA 155
Query: 116 YMHQNGFFHRDLKPENLLVS--QGIIKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQ 173
Y+H G HRD+KP+NLL+ G++K+ DFG A+ + +G P + + SR+YRAPE++
Sbjct: 156 YIHSIGICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEPNVSXICSRYYRAPELIFG 215
Query: 174 SELYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQARA 233
+ Y++ D+W+ G +MAEL PLFPG S DQ+ +I VLG+P+ +
Sbjct: 216 ATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQLVEIIKVLGTPSREQIKT--MNPNY 273
Query: 234 IKYQFPQL-PRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFF 284
++++FPQ+ P P DAI L L + PS R TA EAL HPFF
Sbjct: 274 MEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALCHPFF 325
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 173 bits (438), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 104/298 (34%), Positives = 165/298 (55%), Gaps = 23/298 (7%)
Query: 1 MDKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDC-----LNLREVKCLR 55
M+KY ++G G++G VF+ + TG+ VAIK ++ ED + LRE++ L+
Sbjct: 2 MEKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIK----KFLESEDDPVIKKIALREIRMLK 57
Query: 56 KLNHSNIVKLKELIQNNNRLYLVFE-CMECNLYQLMAARDRKLFSEPE--IKAWLFQVFQ 112
+L H N+V L E+ + RL+LVFE C L++L DR PE +K+ +Q Q
Sbjct: 58 QLKHPNLVNLLEVFRRKRRLHLVFEYCDHTVLHEL----DRYQRGVPEHLVKSITWQTLQ 113
Query: 113 GLSYMHQNGFFHRDLKPENLLVSQ-GIIKIADFGLAREIKSGPP--YTNYVGSRWYRAPE 169
+++ H++ HRD+KPEN+L+++ +IK+ DFG AR + +GP Y + V +RWYR+PE
Sbjct: 114 AVNFCHKHNCIHRDVKPENILITKHSVIKLCDFGFAR-LLTGPSDYYDDEVATRWYRSPE 172
Query: 170 ILLQSELYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGS--PTMDSWADG 227
+L+ Y D+WA+G + AEL + PL+PG S+ DQ+Y I LG P
Sbjct: 173 LLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFST 232
Query: 228 LRQARAIKYQFPQLPRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFFK 285
+ +K P+ L P+ S A+ L + DP++R T + L HP+F+
Sbjct: 233 NQYFSGVKIPDPE-DMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLHHPYFE 289
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 173 bits (438), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 100/296 (33%), Positives = 159/296 (53%), Gaps = 22/296 (7%)
Query: 2 DKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDC-LNLREVKCLRKLNHS 60
++Y +G GA+G V AFD TG VA+K+L + + S RE++ L+ + H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 61 NIVKLKEL------IQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGL 114
N++ L ++ ++ N +YLV M +L ++ + ++ ++ ++Q+ +GL
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRGL 138
Query: 115 SYMHQNGFFHRDLKPENLLVSQGI-IKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQ 173
Y+H HRDLKP NL V++ +KI DFGLAR + +V +RWYRAPEI+L
Sbjct: 139 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEMAGFVATRWYRAPEIMLN 196
Query: 174 SELYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQ--- 230
Y+ D+W++G IMAEL T LFPG DQ+ I ++G+P A+ L++
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG----AELLKKISS 252
Query: 231 --ARAIKYQFPQLPRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFF 284
AR Q+P+ N + + A+ A+ L E + D KR TAA+AL H +F
Sbjct: 253 ESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 172 bits (437), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 101/296 (34%), Positives = 159/296 (53%), Gaps = 22/296 (7%)
Query: 2 DKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDC-LNLREVKCLRKLNHS 60
++Y +G GA+G V AFD TG VA+K+L + + S RE++ L+ + H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 61 NIVKLKEL------IQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGL 114
N++ L ++ ++ N +YLV M +L ++ + ++ ++ ++Q+ +GL
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRGL 138
Query: 115 SYMHQNGFFHRDLKPENLLVSQGI-IKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQ 173
Y+H HRDLKP NL V++ +KI FGLAR + T YV +RWYRAPEI+L
Sbjct: 139 KYIHSADIIHRDLKPSNLAVNEDCELKILGFGLARH--TDDEMTGYVATRWYRAPEIMLN 196
Query: 174 SELYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQ--- 230
Y+ D+W++G IMAEL T LFPG DQ+ I ++G+P A+ L++
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG----AELLKKISS 252
Query: 231 --ARAIKYQFPQLPRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFF 284
AR Q+P+ N + + A+ A+ L E + D KR TAA+AL H +F
Sbjct: 253 ESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 172 bits (436), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 101/296 (34%), Positives = 159/296 (53%), Gaps = 22/296 (7%)
Query: 2 DKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDC-LNLREVKCLRKLNHS 60
++Y +G GA+G V AFD TG VA+K+L + + S RE++ L+ + H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 61 NIVKLKEL------IQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGL 114
N++ L ++ ++ N +YLV M +L ++ + ++ ++ ++Q+ +GL
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRGL 138
Query: 115 SYMHQNGFFHRDLKPENLLVSQGI-IKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQ 173
Y+H HRDLKP NL V++ +KI D GLAR + T YV +RWYRAPEI+L
Sbjct: 139 KYIHSADIIHRDLKPSNLAVNEDCELKILDAGLARH--TDDEMTGYVATRWYRAPEIMLN 196
Query: 174 SELYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQ--- 230
Y+ D+W++G IMAEL T LFPG DQ+ I ++G+P A+ L++
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG----AELLKKISS 252
Query: 231 --ARAIKYQFPQLPRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFF 284
AR Q+P+ N + + A+ A+ L E + D KR TAA+AL H +F
Sbjct: 253 ESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 172 bits (436), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 101/296 (34%), Positives = 159/296 (53%), Gaps = 22/296 (7%)
Query: 2 DKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDC-LNLREVKCLRKLNHS 60
++Y +G GA+G V AFD TG VA+K+L + + S RE++ L+ + H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 61 NIVKLKEL------IQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGL 114
N++ L ++ ++ N +YLV M +L ++ + ++ ++ ++Q+ +GL
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRGL 138
Query: 115 SYMHQNGFFHRDLKPENLLVSQGI-IKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQ 173
Y+H HRDLKP NL V++ +KI DFGLAR + T V +RWYRAPEI+L
Sbjct: 139 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEMTGXVATRWYRAPEIMLN 196
Query: 174 SELYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQ--- 230
Y+ D+W++G IMAEL T LFPG DQ+ I ++G+P A+ L++
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG----AELLKKISS 252
Query: 231 --ARAIKYQFPQLPRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFF 284
AR Q+P+ N + + A+ A+ L E + D KR TAA+AL H +F
Sbjct: 253 ESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 172 bits (436), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 101/296 (34%), Positives = 159/296 (53%), Gaps = 22/296 (7%)
Query: 2 DKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDC-LNLREVKCLRKLNHS 60
++Y +G GA+G V AFD TG VA+K+L + + S RE++ L+ + H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 61 NIVKLKEL------IQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGL 114
N++ L ++ ++ N +YLV M +L ++ + ++ ++ ++Q+ +GL
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRGL 138
Query: 115 SYMHQNGFFHRDLKPENLLVSQGI-IKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQ 173
Y+H HRDLKP NL V++ +KI D GLAR + T YV +RWYRAPEI+L
Sbjct: 139 KYIHSADIIHRDLKPSNLAVNEDCELKILDRGLARH--TDDEMTGYVATRWYRAPEIMLN 196
Query: 174 SELYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQ--- 230
Y+ D+W++G IMAEL T LFPG DQ+ I ++G+P A+ L++
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG----AELLKKISS 252
Query: 231 --ARAIKYQFPQLPRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFF 284
AR Q+P+ N + + A+ A+ L E + D KR TAA+AL H +F
Sbjct: 253 ESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 172 bits (435), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 101/296 (34%), Positives = 159/296 (53%), Gaps = 22/296 (7%)
Query: 2 DKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDC-LNLREVKCLRKLNHS 60
++Y +G GA+G V AFD TG VA+K+L + + S RE++ L+ + H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 61 NIVKLKEL------IQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGL 114
N++ L ++ ++ N +YLV M +L ++ + ++ ++ ++Q+ +GL
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRGL 138
Query: 115 SYMHQNGFFHRDLKPENLLVSQGI-IKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQ 173
Y+H HRDLKP NL V++ +KI D GLAR + T YV +RWYRAPEI+L
Sbjct: 139 KYIHSADIIHRDLKPSNLAVNEDCELKILDGGLARH--TDDEMTGYVATRWYRAPEIMLN 196
Query: 174 SELYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQ--- 230
Y+ D+W++G IMAEL T LFPG DQ+ I ++G+P A+ L++
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG----AELLKKISS 252
Query: 231 --ARAIKYQFPQLPRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFF 284
AR Q+P+ N + + A+ A+ L E + D KR TAA+AL H +F
Sbjct: 253 ESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 172 bits (435), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 100/292 (34%), Positives = 163/292 (55%), Gaps = 18/292 (6%)
Query: 4 YSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLNLREVKCLRKLNHSNIV 63
Y+ K +G G+FG V+QA +GE VAIK++ Q A RE++ +RKL+H NIV
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKA-----FKNRELQIMRKLDHCNIV 76
Query: 64 KLKELIQNNNR------LYLVFECMECNLYQLMAARDRKLFSEPEI--KAWLFQVFQGLS 115
+L+ ++ L LV + + +Y++ R + P I K +++Q+F+ L+
Sbjct: 77 RLRYFFYSSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 136
Query: 116 YMHQNGFFHRDLKPENLLVS--QGIIKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQ 173
Y+H G HRD+KP+NLL+ ++K+ DFG A+++ G P + + SR+YRAPE++
Sbjct: 137 YIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFG 196
Query: 174 SELYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQARA 233
+ Y+S D+W+ G ++AEL P+FPG S DQ+ +I VLG+PT + +
Sbjct: 197 ATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIRE--MNPNY 254
Query: 234 IKYQFPQLPRANLSALM-PSASQDAISLFESLCSWDPSKRPTAAEALQHPFF 284
++ FPQ+ + + P +AI+L L + P+ R T EA H FF
Sbjct: 255 TEFAFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFF 306
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 171 bits (433), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 98/292 (33%), Positives = 154/292 (52%), Gaps = 14/292 (4%)
Query: 2 DKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDC-LNLREVKCLRKLNHS 60
++Y +G GA+G V AFD TG VA+K+L + + S RE++ L+ + H
Sbjct: 42 ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 101
Query: 61 NIVKLKEL------IQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGL 114
N++ L ++ ++ N +YLV M +L ++ + ++ ++ ++Q+ +GL
Sbjct: 102 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRGL 158
Query: 115 SYMHQNGFFHRDLKPENLLVSQGI-IKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQ 173
Y+H HRDLKP NL V++ +KI DFGLAR + V +RWYRAPEI+L
Sbjct: 159 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEMXGXVATRWYRAPEIMLN 216
Query: 174 SELYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWAD-GLRQAR 232
Y+ D+W++G IMAEL T LFPG DQ+ I ++G+P + AR
Sbjct: 217 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESAR 276
Query: 233 AIKYQFPQLPRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFF 284
Q+P+ N + + A+ A+ L E + D KR TAA+AL H +F
Sbjct: 277 NYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 328
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 171 bits (433), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 100/293 (34%), Positives = 165/293 (56%), Gaps = 20/293 (6%)
Query: 4 YSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLNLREVKCLRKLNHSNIV 63
Y+ K +G G+FG V+QA +GE VAIK++ Q + RE++ +RKL+H NIV
Sbjct: 41 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKNRELQIMRKLDHCNIV 95
Query: 64 KLKELIQNNNR------LYLVFECMECNLYQLMAARDRKLFSEPEI--KAWLFQVFQGLS 115
+L+ ++ L LV + + +Y++ R + P I K +++Q+F+ L+
Sbjct: 96 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 155
Query: 116 YMHQNGFFHRDLKPENLLVS--QGIIKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQ 173
Y+H G HRD+KP+NLL+ ++K+ DFG A+++ G P + + SR+YRAPE++
Sbjct: 156 YIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFG 215
Query: 174 SELYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQARA 233
+ Y+S D+W+ G ++AEL P+FPG S DQ+ +I VLG+PT + +
Sbjct: 216 ATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIRE--MNPNY 273
Query: 234 IKYQFPQLPRAN--LSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFF 284
+++FPQ+ +A+ P +AI+L L + P+ R T EA H FF
Sbjct: 274 TEFKFPQI-KAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFF 325
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 171 bits (433), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 100/293 (34%), Positives = 165/293 (56%), Gaps = 20/293 (6%)
Query: 4 YSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLNLREVKCLRKLNHSNIV 63
Y+ K +G G+FG V+QA +GE VAIK++ Q + RE++ +RKL+H NIV
Sbjct: 30 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKNRELQIMRKLDHCNIV 84
Query: 64 KLKELIQNNNR------LYLVFECMECNLYQLMAARDRKLFSEPEI--KAWLFQVFQGLS 115
+L+ ++ L LV + + +Y++ R + P I K +++Q+F+ L+
Sbjct: 85 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 144
Query: 116 YMHQNGFFHRDLKPENLLVS--QGIIKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQ 173
Y+H G HRD+KP+NLL+ ++K+ DFG A+++ G P + + SR+YRAPE++
Sbjct: 145 YIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFG 204
Query: 174 SELYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQARA 233
+ Y+S D+W+ G ++AEL P+FPG S DQ+ +I VLG+PT + +
Sbjct: 205 ATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIRE--MNPNY 262
Query: 234 IKYQFPQLPRAN--LSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFF 284
+++FPQ+ +A+ P +AI+L L + P+ R T EA H FF
Sbjct: 263 TEFKFPQI-KAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFF 314
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 171 bits (433), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 100/293 (34%), Positives = 165/293 (56%), Gaps = 20/293 (6%)
Query: 4 YSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLNLREVKCLRKLNHSNIV 63
Y+ K +G G+FG V+QA +GE VAIK++ Q + RE++ +RKL+H NIV
Sbjct: 56 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKNRELQIMRKLDHCNIV 110
Query: 64 KLKELIQNNNR------LYLVFECMECNLYQLMAARDRKLFSEPEI--KAWLFQVFQGLS 115
+L+ ++ L LV + + +Y++ R + P I K +++Q+F+ L+
Sbjct: 111 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 170
Query: 116 YMHQNGFFHRDLKPENLLVS--QGIIKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQ 173
Y+H G HRD+KP+NLL+ ++K+ DFG A+++ G P + + SR+YRAPE++
Sbjct: 171 YIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFG 230
Query: 174 SELYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQARA 233
+ Y+S D+W+ G ++AEL P+FPG S DQ+ +I VLG+PT + +
Sbjct: 231 ATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIRE--MNPNY 288
Query: 234 IKYQFPQLPRAN--LSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFF 284
+++FPQ+ +A+ P +AI+L L + P+ R T EA H FF
Sbjct: 289 TEFKFPQI-KAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFF 340
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 171 bits (433), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 100/293 (34%), Positives = 165/293 (56%), Gaps = 20/293 (6%)
Query: 4 YSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLNLREVKCLRKLNHSNIV 63
Y+ K +G G+FG V+QA +GE VAIK++ Q + RE++ +RKL+H NIV
Sbjct: 34 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKNRELQIMRKLDHCNIV 88
Query: 64 KLKELIQNNNR------LYLVFECMECNLYQLMAARDRKLFSEPEI--KAWLFQVFQGLS 115
+L+ ++ L LV + + +Y++ R + P I K +++Q+F+ L+
Sbjct: 89 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 148
Query: 116 YMHQNGFFHRDLKPENLLVS--QGIIKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQ 173
Y+H G HRD+KP+NLL+ ++K+ DFG A+++ G P + + SR+YRAPE++
Sbjct: 149 YIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFG 208
Query: 174 SELYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQARA 233
+ Y+S D+W+ G ++AEL P+FPG S DQ+ +I VLG+PT + +
Sbjct: 209 ATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIRE--MNPNY 266
Query: 234 IKYQFPQLPRAN--LSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFF 284
+++FPQ+ +A+ P +AI+L L + P+ R T EA H FF
Sbjct: 267 TEFKFPQI-KAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFF 318
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 171 bits (432), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 100/293 (34%), Positives = 165/293 (56%), Gaps = 20/293 (6%)
Query: 4 YSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLNLREVKCLRKLNHSNIV 63
Y+ K +G G+FG V+QA +GE VAIK++ Q + RE++ +RKL+H NIV
Sbjct: 34 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKNRELQIMRKLDHCNIV 88
Query: 64 KLKELIQNNNR------LYLVFECMECNLYQLMAARDRKLFSEPEI--KAWLFQVFQGLS 115
+L+ ++ L LV + + +Y++ R + P I K +++Q+F+ L+
Sbjct: 89 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 148
Query: 116 YMHQNGFFHRDLKPENLLVS--QGIIKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQ 173
Y+H G HRD+KP+NLL+ ++K+ DFG A+++ G P + + SR+YRAPE++
Sbjct: 149 YIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFG 208
Query: 174 SELYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQARA 233
+ Y+S D+W+ G ++AEL P+FPG S DQ+ +I VLG+PT + +
Sbjct: 209 ATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIRE--MNPNY 266
Query: 234 IKYQFPQLPRAN--LSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFF 284
+++FPQ+ +A+ P +AI+L L + P+ R T EA H FF
Sbjct: 267 TEFKFPQI-KAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFF 318
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 171 bits (432), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 99/292 (33%), Positives = 164/292 (56%), Gaps = 18/292 (6%)
Query: 4 YSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLNLREVKCLRKLNHSNIV 63
Y+ K +G G+FG V+QA +GE VAIK++ Q + RE++ +RKL+H NIV
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKNRELQIMRKLDHCNIV 76
Query: 64 KLKELIQNNNR------LYLVFECMECNLYQLMAARDRKLFSEPEI--KAWLFQVFQGLS 115
+L+ ++ L LV + + +Y++ R + P I K +++Q+F+ L+
Sbjct: 77 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 136
Query: 116 YMHQNGFFHRDLKPENLLVS--QGIIKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQ 173
Y+H G HRD+KP+NLL+ ++K+ DFG A+++ G P + + SR+YRAPE++
Sbjct: 137 YIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFG 196
Query: 174 SELYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQARA 233
+ Y+S D+W+ G ++AEL P+FPG S DQ+ +I VLG+PT + +
Sbjct: 197 ATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIRE--MNPNY 254
Query: 234 IKYQFPQLPRANLSALM-PSASQDAISLFESLCSWDPSKRPTAAEALQHPFF 284
+++FPQ+ + + P +AI+L L + P+ R T EA H FF
Sbjct: 255 TEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFF 306
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 171 bits (432), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 99/292 (33%), Positives = 164/292 (56%), Gaps = 18/292 (6%)
Query: 4 YSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLNLREVKCLRKLNHSNIV 63
Y+ K +G G+FG V+QA +GE VAIK++ Q + RE++ +RKL+H NIV
Sbjct: 26 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKNRELQIMRKLDHCNIV 80
Query: 64 KLKELIQNNNR------LYLVFECMECNLYQLMAARDRKLFSEPEI--KAWLFQVFQGLS 115
+L+ ++ L LV + + +Y++ R + P I K +++Q+F+ L+
Sbjct: 81 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 140
Query: 116 YMHQNGFFHRDLKPENLLVS--QGIIKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQ 173
Y+H G HRD+KP+NLL+ ++K+ DFG A+++ G P + + SR+YRAPE++
Sbjct: 141 YIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFG 200
Query: 174 SELYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQARA 233
+ Y+S D+W+ G ++AEL P+FPG S DQ+ +I VLG+PT + +
Sbjct: 201 ATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIRE--MNPNY 258
Query: 234 IKYQFPQLPRANLSALM-PSASQDAISLFESLCSWDPSKRPTAAEALQHPFF 284
+++FPQ+ + + P +AI+L L + P+ R T EA H FF
Sbjct: 259 TEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFF 310
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 171 bits (432), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 99/292 (33%), Positives = 164/292 (56%), Gaps = 18/292 (6%)
Query: 4 YSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLNLREVKCLRKLNHSNIV 63
Y+ K +G G+FG V+QA +GE VAIK++ Q + RE++ +RKL+H NIV
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKNRELQIMRKLDHCNIV 76
Query: 64 KLKELIQNNNR------LYLVFECMECNLYQLMAARDRKLFSEPEI--KAWLFQVFQGLS 115
+L+ ++ L LV + + +Y++ R + P I K +++Q+F+ L+
Sbjct: 77 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 136
Query: 116 YMHQNGFFHRDLKPENLLVS--QGIIKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQ 173
Y+H G HRD+KP+NLL+ ++K+ DFG A+++ G P + + SR+YRAPE++
Sbjct: 137 YIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFG 196
Query: 174 SELYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQARA 233
+ Y+S D+W+ G ++AEL P+FPG S DQ+ +I VLG+PT + +
Sbjct: 197 ATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIRE--MNPNY 254
Query: 234 IKYQFPQLPRANLSALM-PSASQDAISLFESLCSWDPSKRPTAAEALQHPFF 284
+++FPQ+ + + P +AI+L L + P+ R T EA H FF
Sbjct: 255 TEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFF 306
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 171 bits (432), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 99/292 (33%), Positives = 164/292 (56%), Gaps = 18/292 (6%)
Query: 4 YSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLNLREVKCLRKLNHSNIV 63
Y+ K +G G+FG V+QA +GE VAIK++ Q + RE++ +RKL+H NIV
Sbjct: 23 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKNRELQIMRKLDHCNIV 77
Query: 64 KLKELIQNNNR------LYLVFECMECNLYQLMAARDRKLFSEPEI--KAWLFQVFQGLS 115
+L+ ++ L LV + + +Y++ R + P I K +++Q+F+ L+
Sbjct: 78 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 137
Query: 116 YMHQNGFFHRDLKPENLLVS--QGIIKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQ 173
Y+H G HRD+KP+NLL+ ++K+ DFG A+++ G P + + SR+YRAPE++
Sbjct: 138 YIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFG 197
Query: 174 SELYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQARA 233
+ Y+S D+W+ G ++AEL P+FPG S DQ+ +I VLG+PT + +
Sbjct: 198 ATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIRE--MNPNY 255
Query: 234 IKYQFPQLPRANLSALM-PSASQDAISLFESLCSWDPSKRPTAAEALQHPFF 284
+++FPQ+ + + P +AI+L L + P+ R T EA H FF
Sbjct: 256 TEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFF 307
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 171 bits (432), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 99/292 (33%), Positives = 164/292 (56%), Gaps = 18/292 (6%)
Query: 4 YSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLNLREVKCLRKLNHSNIV 63
Y+ K +G G+FG V+QA +GE VAIK++ Q + RE++ +RKL+H NIV
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKNRELQIMRKLDHCNIV 76
Query: 64 KLKELIQNNNR------LYLVFECMECNLYQLMAARDRKLFSEPEI--KAWLFQVFQGLS 115
+L+ ++ L LV + + +Y++ R + P I K +++Q+F+ L+
Sbjct: 77 RLRYFFYSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 136
Query: 116 YMHQNGFFHRDLKPENLLVS--QGIIKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQ 173
Y+H G HRD+KP+NLL+ ++K+ DFG A+++ G P + + SR+YRAPE++
Sbjct: 137 YIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFG 196
Query: 174 SELYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQARA 233
+ Y+S D+W+ G ++AEL P+FPG S DQ+ +I VLG+PT + +
Sbjct: 197 ATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIRE--MNPNY 254
Query: 234 IKYQFPQLPRANLSALM-PSASQDAISLFESLCSWDPSKRPTAAEALQHPFF 284
+++FPQ+ + + P +AI+L L + P+ R T EA H FF
Sbjct: 255 TEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFF 306
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 170 bits (431), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 105/292 (35%), Positives = 161/292 (55%), Gaps = 16/292 (5%)
Query: 4 YSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLN-LREVKCLRKLNHSNI 62
Y + +G GA+G V A D TG VAIK+L + + S RE++ L+ + H N+
Sbjct: 27 YRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENV 86
Query: 63 VKL------KELIQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSY 116
+ L E + + YLV M +L +LM + KL E I+ ++Q+ +GL Y
Sbjct: 87 IGLLDVFTPDETLDDFTDFYLVMPFMGTDLGKLM--KHEKL-GEDRIQFLVYQMLKGLRY 143
Query: 117 MHQNGFFHRDLKPENLLVSQGI-IKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQSE 175
+H G HRDLKP NL V++ +KI DFGLAR+ S V +RWYRAPE++L
Sbjct: 144 IHAAGIIHRDLKPGNLAVNEDCELKILDFGLARQADS--EMXGXVVTRWYRAPEVILNWM 201
Query: 176 LYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQARAIK 235
Y+ D+W++G IMAE+ T LF G+ DQ+ +I V G+P + + L+ A
Sbjct: 202 RYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAE-FVQRLQSDEAKN 260
Query: 236 YQ--FPQLPRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFFK 285
Y P+L + + ++++ +AS A++L E + D +R TA EAL HP+F+
Sbjct: 261 YMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPYFE 312
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 167 bits (423), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 107/301 (35%), Positives = 163/301 (54%), Gaps = 22/301 (7%)
Query: 3 KYSGFKELGRGAFGRVFQAFD-EHTGEAVAIKELKQRYASWEDCL---NLREVKCLRKLN 58
+Y E+G GA+G+VF+A D ++ G VA+K + R + E+ + +REV LR L
Sbjct: 12 QYECVAEIGEGAYGKVFKARDLKNGGRFVALKRV--RVQTGEEGMPLSTIREVAVLRHLE 69
Query: 59 ---HSNIVKLKEL-----IQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQV 110
H N+V+L ++ +L LVFE ++ +L + IK +FQ+
Sbjct: 70 TFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQL 129
Query: 111 FQGLSYMHQNGFFHRDLKPENLLV-SQGIIKIADFGLAREIKSGPPYTNYVGSRWYRAPE 169
+GL ++H + HRDLKP+N+LV S G IK+ADFGLAR T+ V + WYRAPE
Sbjct: 130 LRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVVTLWYRAPE 189
Query: 170 ILLQSELYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLR 229
+LLQS Y++ D+W++G I AE+F PLF G+S+ DQ+ KI V+G P + W +
Sbjct: 190 VLLQSS-YATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVA 248
Query: 230 QARAIKYQFPQLPRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFFK---R 286
R + P + +D L +++P+KR +A AL HP+F+ R
Sbjct: 249 LPRQAFHSKSAQPIEKFVTDIDELGKD---LLLKCLTFNPAKRISAYSALSHPYFQDLER 305
Query: 287 C 287
C
Sbjct: 306 C 306
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 167 bits (422), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 111/357 (31%), Positives = 172/357 (48%), Gaps = 71/357 (19%)
Query: 2 DKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLN-LREVKCLRKLNHS 60
D+Y +G G++G V +A+D+ VAIK++ + + DC LRE+ L +LNH
Sbjct: 53 DRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHD 112
Query: 61 NIVKLKELI-----QNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLS 115
++VK+ +++ + + LY+V E + + +L R +E IK L+ + G+
Sbjct: 113 HVVKVLDIVIPKDVEKFDELYVVLEIADSDFKKLF--RTPVYLTELHIKTLLYNLLVGVK 170
Query: 116 YMHQNGFFHRDLKPENLLVSQGI-IKIADFGLAREI------KSGPPY------------ 156
Y+H G HRDLKP N LV+Q +K+ DFGLAR + S P
Sbjct: 171 YVHSAGILHRDLKPANCLVNQDCSVKVCDFGLARTVDYPENGNSQLPISPREDDMNLVTF 230
Query: 157 ----------TNYVGSRWYRAPEILLQSELYSSKADMWAMGAIMAELFTFC--------- 197
T +V +RWYRAPE++L E Y+ D+W++G I AEL
Sbjct: 231 PHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNMIKENVAYHAD 290
Query: 198 --PLFPGAS--------------------EADQMYKICGVLGSPTMDSWADGLRQARAIK 235
PLFPG+S DQ+ I +LG+P+ + + L + A +
Sbjct: 291 RGPLFPGSSCFPLSPDQKAGNDFKFHTRGNRDQLNVIFNILGTPSEED-IEALEKEDAKR 349
Query: 236 Y--QFPQLPRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFFKRCFYA 290
Y FP+ +L+ P++S DAI L + + ++P+KR T E L HPFFK A
Sbjct: 350 YIRIFPKREGTDLAERFPASSADAIHLLKRMLVFNPNKRITINECLAHPFFKEVRIA 406
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 167 bits (422), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 107/301 (35%), Positives = 163/301 (54%), Gaps = 22/301 (7%)
Query: 3 KYSGFKELGRGAFGRVFQAFD-EHTGEAVAIKELKQRYASWEDCL---NLREVKCLRKLN 58
+Y E+G GA+G+VF+A D ++ G VA+K + R + E+ + +REV LR L
Sbjct: 12 QYECVAEIGEGAYGKVFKARDLKNGGRFVALKRV--RVQTGEEGMPLSTIREVAVLRHLE 69
Query: 59 ---HSNIVKLKEL-----IQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQV 110
H N+V+L ++ +L LVFE ++ +L + IK +FQ+
Sbjct: 70 TFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQL 129
Query: 111 FQGLSYMHQNGFFHRDLKPENLLV-SQGIIKIADFGLAREIKSGPPYTNYVGSRWYRAPE 169
+GL ++H + HRDLKP+N+LV S G IK+ADFGLAR T+ V + WYRAPE
Sbjct: 130 LRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVVTLWYRAPE 189
Query: 170 ILLQSELYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLR 229
+LLQS Y++ D+W++G I AE+F PLF G+S+ DQ+ KI V+G P + W +
Sbjct: 190 VLLQSS-YATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVA 248
Query: 230 QARAIKYQFPQLPRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFFK---R 286
R + P + +D L +++P+KR +A AL HP+F+ R
Sbjct: 249 LPRQAFHSKSAQPIEKFVTDIDELGKD---LLLKCLTFNPAKRISAYSALSHPYFQDLER 305
Query: 287 C 287
C
Sbjct: 306 C 306
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 166 bits (421), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 105/296 (35%), Positives = 161/296 (54%), Gaps = 19/296 (6%)
Query: 3 KYSGFKELGRGAFGRVFQAFD-EHTGEAVAIKELKQRYASWEDCL---NLREVKCLRKLN 58
+Y E+G GA+G+VF+A D ++ G VA+K + R + E+ + +REV LR L
Sbjct: 12 QYECVAEIGEGAYGKVFKARDLKNGGRFVALKRV--RVQTGEEGMPLSTIREVAVLRHLE 69
Query: 59 ---HSNIVKLKEL-----IQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQV 110
H N+V+L ++ +L LVFE ++ +L + IK +FQ+
Sbjct: 70 TFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQL 129
Query: 111 FQGLSYMHQNGFFHRDLKPENLLV-SQGIIKIADFGLAREIKSGPPYTNYVGSRWYRAPE 169
+GL ++H + HRDLKP+N+LV S G IK+ADFGLAR T+ V + WYRAPE
Sbjct: 130 LRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVVTLWYRAPE 189
Query: 170 ILLQSELYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLR 229
+LLQS Y++ D+W++G I AE+F PLF G+S+ DQ+ KI V+G P + W +
Sbjct: 190 VLLQSS-YATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVA 248
Query: 230 QARAIKYQFPQLPRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFFK 285
R + P + +D L +++P+KR +A AL HP+F+
Sbjct: 249 LPRQAFHSKSAQPIEKFVTDIDELGKD---LLLKCLTFNPAKRISAYSALSHPYFQ 301
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 161 bits (407), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 109/347 (31%), Positives = 167/347 (48%), Gaps = 66/347 (19%)
Query: 2 DKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLN-LREVKCLRKLNHS 60
D Y +GRG++G V+ A+D++ + VAIK++ + + DC LRE+ L +L
Sbjct: 28 DNYEIKHLIGRGSYGYVYLAYDKNANKNVAIKKVNRMFEDLIDCKRILREITILNRLKSD 87
Query: 61 NIVKLKELIQNNN-----RLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLS 115
I++L +LI + LY+V E + +L +L + +E +K L+ + G
Sbjct: 88 YIIRLHDLIIPEDLLKFDELYIVLEIADSDLKKLF--KTPIFLTEQHVKTILYNLLLGEK 145
Query: 116 YMHQNGFFHRDLKPENLLVSQGI-IKIADFGLAREIKS-------------------GP- 154
++H++G HRDLKP N L++Q +KI DFGLAR I S GP
Sbjct: 146 FIHESGIIHRDLKPANCLLNQDCSVKICDFGLARTINSDKDIHIVNDLEEKEENEEPGPH 205
Query: 155 ------PYTNYVGSRWYRAPEILLQSELYSSKADMWAMGAIMAELFTFC----------- 197
T++V +RWYRAPE++L E Y++ D+W+ G I AEL
Sbjct: 206 NKNLKKQLTSHVVTRWYRAPELILLQENYTNSIDIWSTGCIFAELLNMMKSHINNPTNRF 265
Query: 198 PLFPGA-----------------SEADQMYKICGVLGSPTMDSWADGLRQARAIKY--QF 238
PLFPG+ S DQ+ I V+G+P + + + IKY F
Sbjct: 266 PLFPGSSCFPLSPDHNSKKVHEKSNRDQLNIIFNVIGTPPEEDLK-CITKQEVIKYIKLF 324
Query: 239 PQLPRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFFK 285
P +LS S S++ I L ES+ ++ KR T +AL HP+ K
Sbjct: 325 PTRDGIDLSKKYSSISKEGIDLLESMLRFNAQKRITIDKALSHPYLK 371
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 157 bits (398), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 103/301 (34%), Positives = 160/301 (53%), Gaps = 18/301 (5%)
Query: 1 MDKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKE-LKQRYASWEDCLNLREVKCLRKLNH 59
+ KY ++G+G FG VF+A TG+ VA+K+ L + LRE+K L+ L H
Sbjct: 17 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKH 76
Query: 60 SNIVKLKELIQNN----NR----LYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVF 111
N+V L E+ + NR +YLVF+ E +L L++ K F+ EIK + +
Sbjct: 77 ENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVK-FTLSEIKRVMQMLL 135
Query: 112 QGLSYMHQNGFFHRDLKPENLLVSQ-GIIKIADFGLAREI---KSGPP--YTNYVGSRWY 165
GL Y+H+N HRD+K N+L+++ G++K+ADFGLAR K+ P Y N V + WY
Sbjct: 136 NGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWY 195
Query: 166 RAPEILLQSELYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWA 225
R PE+LL Y D+W G IMAE++T P+ G +E Q+ I + GS T + W
Sbjct: 196 RPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWP 255
Query: 226 DGLRQARAIKYQFPQLPRANLSALMPSASQD--AISLFESLCSWDPSKRPTAAEALQHPF 283
+ K + + + + + + +D A+ L + L DP++R + +AL H F
Sbjct: 256 NVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHDF 315
Query: 284 F 284
F
Sbjct: 316 F 316
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 157 bits (398), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 103/301 (34%), Positives = 160/301 (53%), Gaps = 18/301 (5%)
Query: 1 MDKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKE-LKQRYASWEDCLNLREVKCLRKLNH 59
+ KY ++G+G FG VF+A TG+ VA+K+ L + LRE+K L+ L H
Sbjct: 17 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKH 76
Query: 60 SNIVKLKELIQNN----NR----LYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVF 111
N+V L E+ + NR +YLVF+ E +L L++ K F+ EIK + +
Sbjct: 77 ENVVNLIEICRTKASPYNRCKASIYLVFDFCEHDLAGLLSNVLVK-FTLSEIKRVMQMLL 135
Query: 112 QGLSYMHQNGFFHRDLKPENLLVSQ-GIIKIADFGLAREI---KSGPP--YTNYVGSRWY 165
GL Y+H+N HRD+K N+L+++ G++K+ADFGLAR K+ P Y N V + WY
Sbjct: 136 NGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWY 195
Query: 166 RAPEILLQSELYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWA 225
R PE+LL Y D+W G IMAE++T P+ G +E Q+ I + GS T + W
Sbjct: 196 RPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWP 255
Query: 226 DGLRQARAIKYQFPQLPRANLSALMPSASQD--AISLFESLCSWDPSKRPTAAEALQHPF 283
+ K + + + + + + +D A+ L + L DP++R + +AL H F
Sbjct: 256 NVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHDF 315
Query: 284 F 284
F
Sbjct: 316 F 316
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 157 bits (397), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 103/301 (34%), Positives = 160/301 (53%), Gaps = 18/301 (5%)
Query: 1 MDKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKE-LKQRYASWEDCLNLREVKCLRKLNH 59
+ KY ++G+G FG VF+A TG+ VA+K+ L + LRE+K L+ L H
Sbjct: 16 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKH 75
Query: 60 SNIVKLKELIQNN----NR----LYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVF 111
N+V L E+ + NR +YLVF+ E +L L++ K F+ EIK + +
Sbjct: 76 ENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVK-FTLSEIKRVMQMLL 134
Query: 112 QGLSYMHQNGFFHRDLKPENLLVSQ-GIIKIADFGLAREI---KSGPP--YTNYVGSRWY 165
GL Y+H+N HRD+K N+L+++ G++K+ADFGLAR K+ P Y N V + WY
Sbjct: 135 NGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWY 194
Query: 166 RAPEILLQSELYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWA 225
R PE+LL Y D+W G IMAE++T P+ G +E Q+ I + GS T + W
Sbjct: 195 RPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWP 254
Query: 226 DGLRQARAIKYQFPQLPRANLSALMPSASQD--AISLFESLCSWDPSKRPTAAEALQHPF 283
+ K + + + + + + +D A+ L + L DP++R + +AL H F
Sbjct: 255 NVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHDF 314
Query: 284 F 284
F
Sbjct: 315 F 315
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 157 bits (397), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 103/301 (34%), Positives = 160/301 (53%), Gaps = 18/301 (5%)
Query: 1 MDKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKE-LKQRYASWEDCLNLREVKCLRKLNH 59
+ KY ++G+G FG VF+A TG+ VA+K+ L + LRE+K L+ L H
Sbjct: 17 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKH 76
Query: 60 SNIVKLKELIQNN----NR----LYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVF 111
N+V L E+ + NR +YLVF+ E +L L++ K F+ EIK + +
Sbjct: 77 ENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVK-FTLSEIKRVMQMLL 135
Query: 112 QGLSYMHQNGFFHRDLKPENLLVSQ-GIIKIADFGLAREI---KSGPP--YTNYVGSRWY 165
GL Y+H+N HRD+K N+L+++ G++K+ADFGLAR K+ P Y N V + WY
Sbjct: 136 NGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWY 195
Query: 166 RAPEILLQSELYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWA 225
R PE+LL Y D+W G IMAE++T P+ G +E Q+ I + GS T + W
Sbjct: 196 RPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWP 255
Query: 226 DGLRQARAIKYQFPQLPRANLSALMPSASQD--AISLFESLCSWDPSKRPTAAEALQHPF 283
+ K + + + + + + +D A+ L + L DP++R + +AL H F
Sbjct: 256 NVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHDF 315
Query: 284 F 284
F
Sbjct: 316 F 316
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 155 bits (391), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 84/256 (32%), Positives = 146/256 (57%), Gaps = 23/256 (8%)
Query: 48 LREVKCLRKLNHSNIVKLKELIQN-----NNRLYLVFECMECNLYQLMAARDRKLFSEPE 102
LRE++ L +H NI+ L+++ + ++LYLV E M +L Q++ D+++ P+
Sbjct: 77 LREIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVI--HDQRIVISPQ 134
Query: 103 -IKAWLFQVFQGLSYMHQNGFFHRDLKPENLLVS-QGIIKIADFGLAREIKSGPPYTNYV 160
I+ +++ + GL +H+ G HRDL P N+L++ I I DF LARE + T+YV
Sbjct: 135 HIQYFMYHILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDFNLAREDTADANKTHYV 194
Query: 161 GSRWYRAPEILLQSELYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPT 220
RWYRAPE+++Q + ++ DMW+ G +MAE+F LF G++ +Q+ KI V+G+P
Sbjct: 195 THRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIVEVVGTPK 254
Query: 221 MD--------SWADGLRQARAIKYQFPQLPRANLSALMPSASQDAISLFESLCSWDPSKR 272
++ S D LR + +P +A++P+A A+ L + ++P +R
Sbjct: 255 IEDVVMFSSPSARDYLRNS------LSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRR 308
Query: 273 PTAAEALQHPFFKRCF 288
+ +AL+HP+F+ F
Sbjct: 309 ISTEQALRHPYFESLF 324
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 154 bits (390), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 84/256 (32%), Positives = 146/256 (57%), Gaps = 23/256 (8%)
Query: 48 LREVKCLRKLNHSNIVKLKELIQN-----NNRLYLVFECMECNLYQLMAARDRKLFSEPE 102
LRE++ L +H NI+ L+++ + ++LYLV E M +L Q++ D+++ P+
Sbjct: 77 LREIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVI--HDQRIVISPQ 134
Query: 103 -IKAWLFQVFQGLSYMHQNGFFHRDLKPENLLVS-QGIIKIADFGLAREIKSGPPYTNYV 160
I+ +++ + GL +H+ G HRDL P N+L++ I I DF LARE + T+YV
Sbjct: 135 HIQYFMYHILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDFNLAREDTADANKTHYV 194
Query: 161 GSRWYRAPEILLQSELYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPT 220
RWYRAPE+++Q + ++ DMW+ G +MAE+F LF G++ +Q+ KI V+G+P
Sbjct: 195 THRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIVEVVGTPK 254
Query: 221 MD--------SWADGLRQARAIKYQFPQLPRANLSALMPSASQDAISLFESLCSWDPSKR 272
++ S D LR + +P +A++P+A A+ L + ++P +R
Sbjct: 255 IEDVVMFSSPSARDYLRNS------LSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRR 308
Query: 273 PTAAEALQHPFFKRCF 288
+ +AL+HP+F+ F
Sbjct: 309 ISTEQALRHPYFESLF 324
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 151 bits (382), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 100/311 (32%), Positives = 152/311 (48%), Gaps = 26/311 (8%)
Query: 1 MDKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLN-LREVKCLRKLNH 59
+ +Y K +G GA G V AFD G VA+K+L + + + RE+ L+ +NH
Sbjct: 23 LKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNH 82
Query: 60 SNIVKL------KELIQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQG 113
NI+ L ++ ++ +YLV E M+ NL Q++ + L+Q+ G
Sbjct: 83 KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIHME----LDHERMSYLLYQMLCG 138
Query: 114 LSYMHQNGFFHRDLKPENLLV-SQGIIKIADFGLAREIKSGPPYTNYVGSRWYRAPEILL 172
+ ++H G HRDLKP N++V S +KI DFGLAR + T YV +R+YRAPE++L
Sbjct: 139 IKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTACTNFMMTPYVVTRYYRAPEVIL 198
Query: 173 QSELYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQAR 232
Y++ D+W++G IM EL C +F G DQ K+ LG+P+ + A R
Sbjct: 199 GMG-YAANVDIWSVGCIMGELVKGCVIFQGTDHIDQWNKVIEQLGTPSAEFMAALQPTVR 257
Query: 233 AIKYQFPQLPRANLSALMPS------ASQDAI------SLFESLCSWDPSKRPTAAEALQ 280
P+ P L P + +D I L + DP KR + EAL+
Sbjct: 258 NYVENRPKYPGIKFEELFPDWIFPSESERDKIKTSQARDLLSKMLVIDPDKRISVDEALR 317
Query: 281 HPFFKRCFYAP 291
HP+ +Y P
Sbjct: 318 HPYIT-VWYDP 327
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 151 bits (382), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 99/311 (31%), Positives = 154/311 (49%), Gaps = 42/311 (13%)
Query: 3 KYSGFKELGRGAFGRVFQAFDEHTGEAVAIKEL------KQRYASWEDCLNLREVKCLRK 56
+Y K LG G G VF A D + VAIK++ ++A LRE+K +R+
Sbjct: 12 RYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHA-------LREIKIIRR 64
Query: 57 LNHSNIVKLKELIQNN--------------NRLYLVFECMECNLYQLMAARDRKLFSEPE 102
L+H NIVK+ E++ + N +Y+V E ME +L ++ ++ E
Sbjct: 65 LDHDNIVKVFEILGPSGSQLTDDVGSLTELNSVYIVQEYMETDLANVL---EQGPLLEEH 121
Query: 103 IKAWLFQVFQGLSYMHQNGFFHRDLKPENLLVSQG--IIKIADFGLAREIKSGPPYTNYV 160
+ +++Q+ +GL Y+H HRDLKP NL ++ ++KI DFGLAR + P+ ++
Sbjct: 122 ARLFMYQLLRGLKYIHSANVLHRDLKPANLFINTEDLVLKIGDFGLARIMD---PHYSHK 178
Query: 161 G-------SRWYRAPEILLQSELYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKIC 213
G ++WYR+P +LL Y+ DMWA G I AE+ T LF GA E +QM I
Sbjct: 179 GHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLIL 238
Query: 214 GVLGSPTMDSWADGLRQARAIKYQFPQLPRANLSALMPSASQDAISLFESLCSWDPSKRP 273
+ + + L P L+ L+P S++A+ E + ++ P R
Sbjct: 239 ESIPVVHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRL 298
Query: 274 TAAEALQHPFF 284
TA EAL HP+
Sbjct: 299 TAEEALSHPYM 309
>pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
pdb|3EB0|C Chain C, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
Length = 383
Score = 149 bits (377), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 96/327 (29%), Positives = 161/327 (49%), Gaps = 54/327 (16%)
Query: 3 KYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQ--RYASWEDCLNLREVKCLRKLNHS 60
KYS K LG G+FG V + FD +G+ A+K++ Q RY + RE+ ++ L+H
Sbjct: 8 KYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPRYKN-------RELDIMKVLDHV 60
Query: 61 NIVKL-----------------------------------KELIQN---NNRLYLVFECM 82
NI+KL K +I N N L ++ E +
Sbjct: 61 NIIKLVDYFYTTGDEEPKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYV 120
Query: 83 ECNLYQLMAARDRKLFSEPE--IKAWLFQVFQGLSYMHQNGFFHRDLKPENLLVS--QGI 138
L++++ + R S P I +++Q+F+ + ++H G HRD+KP+NLLV+
Sbjct: 121 PDTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHSLGICHRDIKPQNLLVNSKDNT 180
Query: 139 IKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQSELYSSKADMWAMGAIMAELFTFCP 198
+K+ DFG A+++ P + SR+YRAPE++L + Y+ D+W++G + EL P
Sbjct: 181 LKLCDFGSAKKLIPSEPSVAXICSRFYRAPELMLGATEYTPSIDLWSIGCVFGELILGKP 240
Query: 199 LFPGASEADQMYKICGVLGSPTMDSWADGLRQARAIKYQFPQLPRANLSALMPSASQD-A 257
LF G + DQ+ +I ++G+PT + + +FP L + ++P + A
Sbjct: 241 LFSGETSIDQLVRIIQIMGTPTKEQMIR--MNPHYTEVRFPTLKAKDWRKILPEGTPSLA 298
Query: 258 ISLFESLCSWDPSKRPTAAEALQHPFF 284
I L E + ++P R EA+ HPFF
Sbjct: 299 IDLLEQILRYEPDLRINPYEAMAHPFF 325
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 149 bits (376), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 99/316 (31%), Positives = 153/316 (48%), Gaps = 26/316 (8%)
Query: 1 MDKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLN-LREVKCLRKLNH 59
+ +Y K +G GA G V A+D VAIK+L + + + RE+ ++ +NH
Sbjct: 23 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNH 82
Query: 60 SNIVKL------KELIQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQG 113
NI+ L ++ ++ +YLV E M+ NL Q++ + L+Q+ G
Sbjct: 83 KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQME----LDHERMSYLLYQMLXG 138
Query: 114 LSYMHQNGFFHRDLKPENLLV-SQGIIKIADFGLAREIKSGPPYTNYVGSRWYRAPEILL 172
+ ++H G HRDLKP N++V S +KI DFGLAR + T YV +R+YRAPE++L
Sbjct: 139 IKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVIL 198
Query: 173 QSELYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPT---MDSWADGLR 229
Y D+W++G IM E+ LFPG DQ K+ LG+P M +R
Sbjct: 199 GMG-YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVR 257
Query: 230 Q--ARAIKYQFPQLPRANLSALMPSASQ-------DAISLFESLCSWDPSKRPTAAEALQ 280
KY P+ +L P+ S+ A L + DP+KR + +ALQ
Sbjct: 258 NYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQ 317
Query: 281 HPFFKRCFYAPPHIRS 296
HP+ +Y P + +
Sbjct: 318 HPYIN-VWYDPAEVEA 332
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 148 bits (374), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 93/291 (31%), Positives = 148/291 (50%), Gaps = 37/291 (12%)
Query: 2 DKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLN--LREVKCLRKLNH 59
D+Y G + LG+G+FG V D+ TG+ A+K + +R + LREV+ L++L+H
Sbjct: 50 DRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDH 109
Query: 60 SNIVKLKELIQNNNRLYLVFECMECN-LYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMH 118
NI+KL E ++ YLV E L+ + +R R FSE + + QV G++YMH
Sbjct: 110 PNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKR--FSEVDAARIIRQVLSGITYMH 167
Query: 119 QNGFFHRDLKPENLLVS----QGIIKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQS 174
+N HRDLKPENLL+ I+I DFGL+ ++ + +G+ +Y APE+L +
Sbjct: 168 KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLHGT 227
Query: 175 ELYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQARAI 234
Y K D+W+ G I+ L + CP F GA+E D + K+ +
Sbjct: 228 --YDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKV-----------------EKGKY 268
Query: 235 KYQFPQLPRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFFK 285
++ PQ + S+ A L + ++ PS R +A +AL H + +
Sbjct: 269 TFELPQWKK---------VSESAKDLIRKMLTYVPSMRISARDALDHEWIQ 310
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 148 bits (374), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 93/291 (31%), Positives = 148/291 (50%), Gaps = 37/291 (12%)
Query: 2 DKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLN--LREVKCLRKLNH 59
D+Y G + LG+G+FG V D+ TG+ A+K + +R + LREV+ L++L+H
Sbjct: 49 DRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDH 108
Query: 60 SNIVKLKELIQNNNRLYLVFECMECN-LYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMH 118
NI+KL E ++ YLV E L+ + +R R FSE + + QV G++YMH
Sbjct: 109 PNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKR--FSEVDAARIIRQVLSGITYMH 166
Query: 119 QNGFFHRDLKPENLLVS----QGIIKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQS 174
+N HRDLKPENLL+ I+I DFGL+ ++ + +G+ +Y APE+L +
Sbjct: 167 KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLHGT 226
Query: 175 ELYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQARAI 234
Y K D+W+ G I+ L + CP F GA+E D + K+ +
Sbjct: 227 --YDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKV-----------------EKGKY 267
Query: 235 KYQFPQLPRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFFK 285
++ PQ + S+ A L + ++ PS R +A +AL H + +
Sbjct: 268 TFELPQWKK---------VSESAKDLIRKMLTYVPSMRISARDALDHEWIQ 309
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 148 bits (373), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 96/291 (32%), Positives = 149/291 (51%), Gaps = 37/291 (12%)
Query: 2 DKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLN--LREVKCLRKLNH 59
D+Y G + LG+G+FG V D+ TG+ A+K + +R + LREV+ L++L+H
Sbjct: 26 DRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDH 85
Query: 60 SNIVKLKELIQNNNRLYLVFECMECN-LYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMH 118
NI+KL E ++ YLV E L+ + +R R FSE + + QV G++YMH
Sbjct: 86 PNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKR--FSEVDAARIIRQVLSGITYMH 143
Query: 119 QNGFFHRDLKPENLLVS----QGIIKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQS 174
+N HRDLKPENLL+ I+I DFGL+ ++ + +G+ +Y APE+L +
Sbjct: 144 KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLHGT 203
Query: 175 ELYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQARAI 234
Y K D+W+ G I+ L + CP F GA+E D L++
Sbjct: 204 --YDEKCDVWSTGVILYILLSGCPPFNGANEYDI-------------------LKKVEKG 242
Query: 235 KYQFPQLPRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFFK 285
KY F +LP+ S+ A L + ++ PS R +A +AL H + +
Sbjct: 243 KYTF-ELPQ------WKKVSESAKDLIRKMLTYVPSMRISARDALDHEWIQ 286
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 147 bits (372), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 99/316 (31%), Positives = 153/316 (48%), Gaps = 26/316 (8%)
Query: 1 MDKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLN-LREVKCLRKLNH 59
+ +Y K +G GA G V A+D VAIK+L + + + RE+ ++ +NH
Sbjct: 23 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 82
Query: 60 SNIVKL------KELIQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQG 113
NI+ L ++ ++ +YLV E M+ NL Q++ + L+Q+ G
Sbjct: 83 KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQME----LDHERMSYLLYQMLXG 138
Query: 114 LSYMHQNGFFHRDLKPENLLV-SQGIIKIADFGLAREIKSGPPYTNYVGSRWYRAPEILL 172
+ ++H G HRDLKP N++V S +KI DFGLAR + T YV +R+YRAPE++L
Sbjct: 139 IKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVIL 198
Query: 173 QSELYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPT---MDSWADGLR 229
Y D+W++G IM E+ LFPG DQ K+ LG+P M +R
Sbjct: 199 GMG-YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVR 257
Query: 230 Q--ARAIKYQFPQLPRANLSALMPSASQ-------DAISLFESLCSWDPSKRPTAAEALQ 280
KY P+ +L P+ S+ A L + DP+KR + +ALQ
Sbjct: 258 NYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQ 317
Query: 281 HPFFKRCFYAPPHIRS 296
HP+ +Y P + +
Sbjct: 318 HPYIN-VWYDPAEVEA 332
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 147 bits (372), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 98/312 (31%), Positives = 148/312 (47%), Gaps = 28/312 (8%)
Query: 1 MDKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLN-LREVKCLRKLNH 59
+ +Y K +G GA G V A+D VAIK+L + + + RE+ ++ +NH
Sbjct: 23 LKRYQNLKPIGSGAQGIVVAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNH 82
Query: 60 SNIVKL------KELIQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQG 113
NI+ L ++ ++ +Y+V E M+ NL Q++ + L+Q+ G
Sbjct: 83 KNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQME----LDHERMSYLLYQMLVG 138
Query: 114 LSYMHQNGFFHRDLKPENLLV-SQGIIKIADFGLAREIKSGPPYTNYVGSRWYRAPEILL 172
+ ++H G HRDLKP N++V S +KI DFGLAR + T YV +R+YRAPE++L
Sbjct: 139 IKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVIL 198
Query: 173 QSELYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQAR 232
Y D+W++G IM E+ LFPG DQ K+ LG+P+ + R
Sbjct: 199 GMG-YKENVDIWSVGVIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQPTVR 257
Query: 233 AIKYQFPQLPRANLSALMPS-------------ASQDAISLFESLCSWDPSKRPTAAEAL 279
P+ + L P ASQ A L + D SKR + EAL
Sbjct: 258 TYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQ-ARDLLSKMLVIDASKRISVDEAL 316
Query: 280 QHPFFKRCFYAP 291
QHP+ +Y P
Sbjct: 317 QHPYIN-VWYDP 327
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 147 bits (371), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 99/316 (31%), Positives = 153/316 (48%), Gaps = 26/316 (8%)
Query: 1 MDKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLN-LREVKCLRKLNH 59
+ +Y K +G GA G V A+D VAIK+L + + + RE+ ++ +NH
Sbjct: 16 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 75
Query: 60 SNIVKL------KELIQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQG 113
NI+ L ++ ++ +YLV E M+ NL Q++ + L+Q+ G
Sbjct: 76 KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQME----LDHERMSYLLYQMLXG 131
Query: 114 LSYMHQNGFFHRDLKPENLLV-SQGIIKIADFGLAREIKSGPPYTNYVGSRWYRAPEILL 172
+ ++H G HRDLKP N++V S +KI DFGLAR + T YV +R+YRAPE++L
Sbjct: 132 IKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVIL 191
Query: 173 QSELYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPT---MDSWADGLR 229
Y D+W++G IM E+ LFPG DQ K+ LG+P M +R
Sbjct: 192 GMG-YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVR 250
Query: 230 Q--ARAIKYQFPQLPRANLSALMPSASQ-------DAISLFESLCSWDPSKRPTAAEALQ 280
KY P+ +L P+ S+ A L + DP+KR + +ALQ
Sbjct: 251 NYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQ 310
Query: 281 HPFFKRCFYAPPHIRS 296
HP+ +Y P + +
Sbjct: 311 HPYIN-VWYDPAEVEA 325
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 147 bits (371), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 96/291 (32%), Positives = 149/291 (51%), Gaps = 37/291 (12%)
Query: 2 DKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLN--LREVKCLRKLNH 59
D+Y G + LG+G+FG V D+ TG+ A+K + +R + LREV+ L++L+H
Sbjct: 32 DRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDH 91
Query: 60 SNIVKLKELIQNNNRLYLVFECMECN-LYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMH 118
NI+KL E ++ YLV E L+ + +R R FSE + + QV G++YMH
Sbjct: 92 PNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKR--FSEVDAARIIRQVLSGITYMH 149
Query: 119 QNGFFHRDLKPENLLVS----QGIIKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQS 174
+N HRDLKPENLL+ I+I DFGL+ ++ + +G+ +Y APE+L +
Sbjct: 150 KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLHGT 209
Query: 175 ELYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQARAI 234
Y K D+W+ G I+ L + CP F GA+E D L++
Sbjct: 210 --YDEKCDVWSTGVILYILLSGCPPFNGANEYDI-------------------LKKVEKG 248
Query: 235 KYQFPQLPRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFFK 285
KY F +LP+ S+ A L + ++ PS R +A +AL H + +
Sbjct: 249 KYTF-ELPQ------WKKVSESAKDLIRKMLTYVPSMRISARDALDHEWIQ 292
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 147 bits (370), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 99/311 (31%), Positives = 151/311 (48%), Gaps = 26/311 (8%)
Query: 1 MDKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLN-LREVKCLRKLNH 59
+ +Y K +G GA G V A+D VAIK+L + + + RE+ ++ +NH
Sbjct: 23 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNH 82
Query: 60 SNIVKL------KELIQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQG 113
NI+ L ++ ++ +YLV E M+ NL Q++ + L+Q+ G
Sbjct: 83 KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQME----LDHERMSYLLYQMLCG 138
Query: 114 LSYMHQNGFFHRDLKPENLLV-SQGIIKIADFGLAREIKSGPPYTNYVGSRWYRAPEILL 172
+ ++H G HRDLKP N++V S +KI DFGLAR + T YV +R+YRAPE++L
Sbjct: 139 IKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVIL 198
Query: 173 QSELYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPT---MDSWADGLR 229
Y D+W++G IM E+ LFPG DQ K+ LG+P M +R
Sbjct: 199 GMG-YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVR 257
Query: 230 Q--ARAIKYQFPQLPRANLSALMPSASQ-------DAISLFESLCSWDPSKRPTAAEALQ 280
KY P+ +L P+ S+ A L + DP+KR + +ALQ
Sbjct: 258 NYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQ 317
Query: 281 HPFFKRCFYAP 291
HP+ +Y P
Sbjct: 318 HPYIN-VWYDP 327
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 146 bits (369), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 99/311 (31%), Positives = 148/311 (47%), Gaps = 26/311 (8%)
Query: 1 MDKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLN-LREVKCLRKLNH 59
+ +Y K +G GA G V AFD G VA+K+L + + + RE+ L+ +NH
Sbjct: 21 LKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNH 80
Query: 60 SNIVKL------KELIQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQG 113
NI+ L ++ ++ +YLV E M+ NL Q++ + L+Q+ G
Sbjct: 81 KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIHME----LDHERMSYLLYQMLCG 136
Query: 114 LSYMHQNGFFHRDLKPENLLV-SQGIIKIADFGLAREIKSGPPYTNYVGSRWYRAPEILL 172
+ ++H G HRDLKP N++V S +KI DFGLAR + T YV +R+YRAPE++L
Sbjct: 137 IKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTASTNFMMTPYVVTRYYRAPEVIL 196
Query: 173 QSELYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQAR 232
Y D+W++G IM EL +F G DQ K+ LG+P+ + A R
Sbjct: 197 GMG-YKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGTPSAEFMAALQPTVR 255
Query: 233 AIKYQFPQLPRANLSALMPS------ASQDAI------SLFESLCSWDPSKRPTAAEALQ 280
P P L P + +D I L + DP KR + EAL+
Sbjct: 256 NYVENRPAYPGIAFEELFPDWIFPSESERDKIKTSQARDLLSKMLVIDPDKRISVDEALR 315
Query: 281 HPFFKRCFYAP 291
HP+ +Y P
Sbjct: 316 HPYIT-VWYDP 325
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 146 bits (368), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 98/312 (31%), Positives = 148/312 (47%), Gaps = 28/312 (8%)
Query: 1 MDKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLN-LREVKCLRKLNH 59
+ +Y K +G GA G V A+D VAIK+L + + + RE+ ++ +NH
Sbjct: 23 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNH 82
Query: 60 SNIVKL------KELIQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQG 113
NI+ L ++ ++ +Y+V E M+ NL Q++ + L+Q+ G
Sbjct: 83 KNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQME----LDHERMSYLLYQMLVG 138
Query: 114 LSYMHQNGFFHRDLKPENLLV-SQGIIKIADFGLAREIKSGPPYTNYVGSRWYRAPEILL 172
+ ++H G HRDLKP N++V S +KI DFGLAR + T YV +R+YRAPE++L
Sbjct: 139 IKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVIL 198
Query: 173 QSELYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQAR 232
Y D+W++G IM E+ LFPG DQ K+ LG+P+ + R
Sbjct: 199 GMG-YKENVDIWSVGVIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQPTVR 257
Query: 233 AIKYQFPQLPRANLSALMPS-------------ASQDAISLFESLCSWDPSKRPTAAEAL 279
P+ + L P ASQ A L + D SKR + EAL
Sbjct: 258 TYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQ-ARDLLSKMLVIDASKRISVDEAL 316
Query: 280 QHPFFKRCFYAP 291
QHP+ +Y P
Sbjct: 317 QHPYIN-VWYDP 327
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 145 bits (366), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 97/304 (31%), Positives = 148/304 (48%), Gaps = 25/304 (8%)
Query: 1 MDKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLN-LREVKCLRKLNH 59
+ +Y K +G GA G V A+D VAIK+L + + + RE+ ++ +NH
Sbjct: 23 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNH 82
Query: 60 SNIVKL------KELIQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQG 113
NI+ L ++ ++ +YLV E M+ NL Q++ + L+Q+ G
Sbjct: 83 KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME----LDHERMSYLLYQMLCG 138
Query: 114 LSYMHQNGFFHRDLKPENLLV-SQGIIKIADFGLAREIKSGPPYTNYVGSRWYRAPEILL 172
+ ++H G HRDLKP N++V S +KI DFGLAR + T YV +R+YRAPE++L
Sbjct: 139 IKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVIL 198
Query: 173 QSELYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPT---MDSWADGLR 229
Y D+W++G IM E+ LFPG DQ K+ LG+P M +R
Sbjct: 199 GMG-YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVR 257
Query: 230 Q--ARAIKYQFPQLPRANLSALMPSASQ-------DAISLFESLCSWDPSKRPTAAEALQ 280
KY P+ +L P+ S+ A L + DP+KR + +ALQ
Sbjct: 258 NYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQ 317
Query: 281 HPFF 284
HP+
Sbjct: 318 HPYI 321
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 145 bits (366), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 99/316 (31%), Positives = 153/316 (48%), Gaps = 26/316 (8%)
Query: 1 MDKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLN-LREVKCLRKLNH 59
+ +Y K +G GA G V A+D VAIK+L + + + RE+ ++ +NH
Sbjct: 22 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 81
Query: 60 SNIVKL------KELIQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQG 113
NI+ L ++ ++ +YLV E M+ NL Q++ + L+Q+ G
Sbjct: 82 KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME----LDHERMSYLLYQMLCG 137
Query: 114 LSYMHQNGFFHRDLKPENLLV-SQGIIKIADFGLAREIKSGPPYTNYVGSRWYRAPEILL 172
+ ++H G HRDLKP N++V S +KI DFGLAR + T YV +R+YRAPE++L
Sbjct: 138 IKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVIL 197
Query: 173 QSELYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPT---MDSWADGLR 229
Y D+W++G IM E+ LFPG DQ K+ LG+P M +R
Sbjct: 198 GMG-YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVR 256
Query: 230 Q--ARAIKYQFPQLPRANLSALMPSASQ-------DAISLFESLCSWDPSKRPTAAEALQ 280
KY P+ +L P+ S+ A L + DP+KR + +ALQ
Sbjct: 257 NYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQ 316
Query: 281 HPFFKRCFYAPPHIRS 296
HP+ +Y P + +
Sbjct: 317 HPYIN-VWYDPAEVEA 331
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 145 bits (366), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 99/316 (31%), Positives = 153/316 (48%), Gaps = 26/316 (8%)
Query: 1 MDKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLN-LREVKCLRKLNH 59
+ +Y K +G GA G V A+D VAIK+L + + + RE+ ++ +NH
Sbjct: 23 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 82
Query: 60 SNIVKL------KELIQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQG 113
NI+ L ++ ++ +YLV E M+ NL Q++ + L+Q+ G
Sbjct: 83 KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME----LDHERMSYLLYQMLCG 138
Query: 114 LSYMHQNGFFHRDLKPENLLV-SQGIIKIADFGLAREIKSGPPYTNYVGSRWYRAPEILL 172
+ ++H G HRDLKP N++V S +KI DFGLAR + T YV +R+YRAPE++L
Sbjct: 139 IKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVIL 198
Query: 173 QSELYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPT---MDSWADGLR 229
Y D+W++G IM E+ LFPG DQ K+ LG+P M +R
Sbjct: 199 GMG-YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVR 257
Query: 230 Q--ARAIKYQFPQLPRANLSALMPSASQ-------DAISLFESLCSWDPSKRPTAAEALQ 280
KY P+ +L P+ S+ A L + DP+KR + +ALQ
Sbjct: 258 NYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQ 317
Query: 281 HPFFKRCFYAPPHIRS 296
HP+ +Y P + +
Sbjct: 318 HPYIN-VWYDPAEVEA 332
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 145 bits (366), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 99/316 (31%), Positives = 153/316 (48%), Gaps = 26/316 (8%)
Query: 1 MDKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLN-LREVKCLRKLNH 59
+ +Y K +G GA G V A+D VAIK+L + + + RE+ ++ +NH
Sbjct: 24 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 83
Query: 60 SNIVKL------KELIQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQG 113
NI+ L ++ ++ +YLV E M+ NL Q++ + L+Q+ G
Sbjct: 84 KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME----LDHERMSYLLYQMLCG 139
Query: 114 LSYMHQNGFFHRDLKPENLLV-SQGIIKIADFGLAREIKSGPPYTNYVGSRWYRAPEILL 172
+ ++H G HRDLKP N++V S +KI DFGLAR + T YV +R+YRAPE++L
Sbjct: 140 IKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVIL 199
Query: 173 QSELYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPT---MDSWADGLR 229
Y D+W++G IM E+ LFPG DQ K+ LG+P M +R
Sbjct: 200 GMG-YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVR 258
Query: 230 Q--ARAIKYQFPQLPRANLSALMPSASQ-------DAISLFESLCSWDPSKRPTAAEALQ 280
KY P+ +L P+ S+ A L + DP+KR + +ALQ
Sbjct: 259 NYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQ 318
Query: 281 HPFFKRCFYAPPHIRS 296
HP+ +Y P + +
Sbjct: 319 HPYIN-VWYDPAEVEA 333
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 145 bits (366), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 99/316 (31%), Positives = 153/316 (48%), Gaps = 26/316 (8%)
Query: 1 MDKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLN-LREVKCLRKLNH 59
+ +Y K +G GA G V A+D VAIK+L + + + RE+ ++ +NH
Sbjct: 16 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 75
Query: 60 SNIVKL------KELIQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQG 113
NI+ L ++ ++ +YLV E M+ NL Q++ + L+Q+ G
Sbjct: 76 KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME----LDHERMSYLLYQMLCG 131
Query: 114 LSYMHQNGFFHRDLKPENLLV-SQGIIKIADFGLAREIKSGPPYTNYVGSRWYRAPEILL 172
+ ++H G HRDLKP N++V S +KI DFGLAR + T YV +R+YRAPE++L
Sbjct: 132 IKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVIL 191
Query: 173 QSELYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPT---MDSWADGLR 229
Y D+W++G IM E+ LFPG DQ K+ LG+P M +R
Sbjct: 192 GMG-YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVR 250
Query: 230 Q--ARAIKYQFPQLPRANLSALMPSASQ-------DAISLFESLCSWDPSKRPTAAEALQ 280
KY P+ +L P+ S+ A L + DP+KR + +ALQ
Sbjct: 251 NYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQ 310
Query: 281 HPFFKRCFYAPPHIRS 296
HP+ +Y P + +
Sbjct: 311 HPYIN-VWYDPAEVEA 325
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 145 bits (366), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 99/316 (31%), Positives = 153/316 (48%), Gaps = 26/316 (8%)
Query: 1 MDKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLN-LREVKCLRKLNH 59
+ +Y K +G GA G V A+D VAIK+L + + + RE+ ++ +NH
Sbjct: 24 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 83
Query: 60 SNIVKL------KELIQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQG 113
NI+ L ++ ++ +YLV E M+ NL Q++ + L+Q+ G
Sbjct: 84 KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME----LDHERMSYLLYQMLCG 139
Query: 114 LSYMHQNGFFHRDLKPENLLV-SQGIIKIADFGLAREIKSGPPYTNYVGSRWYRAPEILL 172
+ ++H G HRDLKP N++V S +KI DFGLAR + T YV +R+YRAPE++L
Sbjct: 140 IKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVIL 199
Query: 173 QSELYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPT---MDSWADGLR 229
Y D+W++G IM E+ LFPG DQ K+ LG+P M +R
Sbjct: 200 GMG-YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVR 258
Query: 230 Q--ARAIKYQFPQLPRANLSALMPSASQ-------DAISLFESLCSWDPSKRPTAAEALQ 280
KY P+ +L P+ S+ A L + DP+KR + +ALQ
Sbjct: 259 NYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQ 318
Query: 281 HPFFKRCFYAPPHIRS 296
HP+ +Y P + +
Sbjct: 319 HPYIN-VWYDPAEVEA 333
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 145 bits (366), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 99/316 (31%), Positives = 153/316 (48%), Gaps = 26/316 (8%)
Query: 1 MDKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLN-LREVKCLRKLNH 59
+ +Y K +G GA G V A+D VAIK+L + + + RE+ ++ +NH
Sbjct: 23 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 82
Query: 60 SNIVKL------KELIQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQG 113
NI+ L ++ ++ +YLV E M+ NL Q++ + L+Q+ G
Sbjct: 83 KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME----LDHERMSYLLYQMLCG 138
Query: 114 LSYMHQNGFFHRDLKPENLLV-SQGIIKIADFGLAREIKSGPPYTNYVGSRWYRAPEILL 172
+ ++H G HRDLKP N++V S +KI DFGLAR + T YV +R+YRAPE++L
Sbjct: 139 IKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVIL 198
Query: 173 QSELYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPT---MDSWADGLR 229
Y D+W++G IM E+ LFPG DQ K+ LG+P M +R
Sbjct: 199 GMG-YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVR 257
Query: 230 Q--ARAIKYQFPQLPRANLSALMPSASQ-------DAISLFESLCSWDPSKRPTAAEALQ 280
KY P+ +L P+ S+ A L + DP+KR + +ALQ
Sbjct: 258 NYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQ 317
Query: 281 HPFFKRCFYAPPHIRS 296
HP+ +Y P + +
Sbjct: 318 HPYIN-VWYDPAEVEA 332
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 145 bits (366), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 99/316 (31%), Positives = 153/316 (48%), Gaps = 26/316 (8%)
Query: 1 MDKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLN-LREVKCLRKLNH 59
+ +Y K +G GA G V A+D VAIK+L + + + RE+ ++ +NH
Sbjct: 17 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 76
Query: 60 SNIVKL------KELIQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQG 113
NI+ L ++ ++ +YLV E M+ NL Q++ + L+Q+ G
Sbjct: 77 KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME----LDHERMSYLLYQMLCG 132
Query: 114 LSYMHQNGFFHRDLKPENLLV-SQGIIKIADFGLAREIKSGPPYTNYVGSRWYRAPEILL 172
+ ++H G HRDLKP N++V S +KI DFGLAR + T YV +R+YRAPE++L
Sbjct: 133 IKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVIL 192
Query: 173 QSELYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPT---MDSWADGLR 229
Y D+W++G IM E+ LFPG DQ K+ LG+P M +R
Sbjct: 193 GMG-YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVR 251
Query: 230 Q--ARAIKYQFPQLPRANLSALMPSASQ-------DAISLFESLCSWDPSKRPTAAEALQ 280
KY P+ +L P+ S+ A L + DP+KR + +ALQ
Sbjct: 252 NYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQ 311
Query: 281 HPFFKRCFYAPPHIRS 296
HP+ +Y P + +
Sbjct: 312 HPYIN-VWYDPAEVEA 326
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 145 bits (366), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 99/316 (31%), Positives = 153/316 (48%), Gaps = 26/316 (8%)
Query: 1 MDKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLN-LREVKCLRKLNH 59
+ +Y K +G GA G V A+D VAIK+L + + + RE+ ++ +NH
Sbjct: 17 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 76
Query: 60 SNIVKL------KELIQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQG 113
NI+ L ++ ++ +YLV E M+ NL Q++ + L+Q+ G
Sbjct: 77 KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME----LDHERMSYLLYQMLCG 132
Query: 114 LSYMHQNGFFHRDLKPENLLV-SQGIIKIADFGLAREIKSGPPYTNYVGSRWYRAPEILL 172
+ ++H G HRDLKP N++V S +KI DFGLAR + T YV +R+YRAPE++L
Sbjct: 133 IKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVIL 192
Query: 173 QSELYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPT---MDSWADGLR 229
Y D+W++G IM E+ LFPG DQ K+ LG+P M +R
Sbjct: 193 GMG-YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVR 251
Query: 230 Q--ARAIKYQFPQLPRANLSALMPSASQ-------DAISLFESLCSWDPSKRPTAAEALQ 280
KY P+ +L P+ S+ A L + DP+KR + +ALQ
Sbjct: 252 NYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQ 311
Query: 281 HPFFKRCFYAPPHIRS 296
HP+ +Y P + +
Sbjct: 312 HPYIN-VWYDPAEVEA 326
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 145 bits (365), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 99/316 (31%), Positives = 153/316 (48%), Gaps = 26/316 (8%)
Query: 1 MDKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLN-LREVKCLRKLNH 59
+ +Y K +G GA G V A+D VAIK+L + + + RE+ ++ +NH
Sbjct: 61 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 120
Query: 60 SNIVKL------KELIQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQG 113
NI+ L ++ ++ +YLV E M+ NL Q++ + L+Q+ G
Sbjct: 121 KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME----LDHERMSYLLYQMLCG 176
Query: 114 LSYMHQNGFFHRDLKPENLLV-SQGIIKIADFGLAREIKSGPPYTNYVGSRWYRAPEILL 172
+ ++H G HRDLKP N++V S +KI DFGLAR + T YV +R+YRAPE++L
Sbjct: 177 IKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVIL 236
Query: 173 QSELYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPT---MDSWADGLR 229
Y D+W++G IM E+ LFPG DQ K+ LG+P M +R
Sbjct: 237 GMG-YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVR 295
Query: 230 Q--ARAIKYQFPQLPRANLSALMPSASQ-------DAISLFESLCSWDPSKRPTAAEALQ 280
KY P+ +L P+ S+ A L + DP+KR + +ALQ
Sbjct: 296 NYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQ 355
Query: 281 HPFFKRCFYAPPHIRS 296
HP+ +Y P + +
Sbjct: 356 HPYI-NVWYDPAEVEA 370
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 145 bits (365), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 98/312 (31%), Positives = 148/312 (47%), Gaps = 28/312 (8%)
Query: 1 MDKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLN-LREVKCLRKLNH 59
+ +Y K +G GA G V A+D VAIK+L + + + RE+ ++ +NH
Sbjct: 23 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNH 82
Query: 60 SNIVKL------KELIQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQG 113
NI+ L ++ ++ +Y+V E M+ NL Q++ + L+Q+ G
Sbjct: 83 KNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQME----LDHERMSYLLYQMLVG 138
Query: 114 LSYMHQNGFFHRDLKPENLLV-SQGIIKIADFGLAREIKSGPPYTNYVGSRWYRAPEILL 172
+ ++H G HRDLKP N++V S +KI DFGLAR + T YV +R+YRAPE++L
Sbjct: 139 IKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVIL 198
Query: 173 QSELYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQAR 232
Y D+W++G IM E+ LFPG DQ K+ LG+P+ + R
Sbjct: 199 GMG-YKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQPTVR 257
Query: 233 AIKYQFPQLPRANLSALMPS-------------ASQDAISLFESLCSWDPSKRPTAAEAL 279
P+ + L P ASQ A L + D SKR + EAL
Sbjct: 258 TYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQ-ARDLLSKMLVIDASKRISVDEAL 316
Query: 280 QHPFFKRCFYAP 291
QHP+ +Y P
Sbjct: 317 QHPYIN-VWYDP 327
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 145 bits (365), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 99/316 (31%), Positives = 153/316 (48%), Gaps = 26/316 (8%)
Query: 1 MDKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLN-LREVKCLRKLNH 59
+ +Y K +G GA G V A+D VAIK+L + + + RE+ ++ +NH
Sbjct: 61 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 120
Query: 60 SNIVKL------KELIQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQG 113
NI+ L ++ ++ +YLV E M+ NL Q++ + L+Q+ G
Sbjct: 121 KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME----LDHERMSYLLYQMLCG 176
Query: 114 LSYMHQNGFFHRDLKPENLLV-SQGIIKIADFGLAREIKSGPPYTNYVGSRWYRAPEILL 172
+ ++H G HRDLKP N++V S +KI DFGLAR + T YV +R+YRAPE++L
Sbjct: 177 IKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVIL 236
Query: 173 QSELYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPT---MDSWADGLR 229
Y D+W++G IM E+ LFPG DQ K+ LG+P M +R
Sbjct: 237 GMG-YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVR 295
Query: 230 Q--ARAIKYQFPQLPRANLSALMPSASQ-------DAISLFESLCSWDPSKRPTAAEALQ 280
KY P+ +L P+ S+ A L + DP+KR + +ALQ
Sbjct: 296 NYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQ 355
Query: 281 HPFFKRCFYAPPHIRS 296
HP+ +Y P + +
Sbjct: 356 HPYI-NVWYDPAEVEA 370
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 144 bits (363), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 98/312 (31%), Positives = 148/312 (47%), Gaps = 28/312 (8%)
Query: 1 MDKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLN-LREVKCLRKLNH 59
+ +Y K +G GA G V A+D VAIK+L + + + RE+ ++ +NH
Sbjct: 23 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNH 82
Query: 60 SNIVKL------KELIQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQG 113
NI+ L ++ ++ +Y+V E M+ NL Q++ + L+Q+ G
Sbjct: 83 KNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQME----LDHERMSYLLYQMLCG 138
Query: 114 LSYMHQNGFFHRDLKPENLLV-SQGIIKIADFGLAREIKSGPPYTNYVGSRWYRAPEILL 172
+ ++H G HRDLKP N++V S +KI DFGLAR + T YV +R+YRAPE++L
Sbjct: 139 IKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVIL 198
Query: 173 QSELYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQAR 232
Y D+W++G IM E+ LFPG DQ K+ LG+P+ + R
Sbjct: 199 GMG-YKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQPTVR 257
Query: 233 AIKYQFPQLPRANLSALMPS-------------ASQDAISLFESLCSWDPSKRPTAAEAL 279
P+ + L P ASQ A L + D SKR + EAL
Sbjct: 258 TYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQ-ARDLLSKMLVIDASKRISVDEAL 316
Query: 280 QHPFFKRCFYAP 291
QHP+ +Y P
Sbjct: 317 QHPYIN-VWYDP 327
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 144 bits (362), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 95/291 (32%), Positives = 146/291 (50%), Gaps = 37/291 (12%)
Query: 2 DKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLN--LREVKCLRKLNH 59
D+Y G + LG+G+FG V D+ TG+ A+K + +R + LREV+ L++L+H
Sbjct: 26 DRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDH 85
Query: 60 SNIVKLKELIQNNNRLYLVFECMECN-LYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMH 118
NI KL E ++ YLV E L+ + +R R FSE + + QV G++Y H
Sbjct: 86 PNIXKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKR--FSEVDAARIIRQVLSGITYXH 143
Query: 119 QNGFFHRDLKPENLLVS----QGIIKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQS 174
+N HRDLKPENLL+ I+I DFGL+ ++ + +G+ +Y APE+L +
Sbjct: 144 KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKXKDKIGTAYYIAPEVLHGT 203
Query: 175 ELYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQARAI 234
Y K D+W+ G I+ L + CP F GA+E D + K+
Sbjct: 204 --YDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKV-------------------EKG 242
Query: 235 KYQFPQLPRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFFK 285
KY F +LP+ S+ A L ++ PS R +A +AL H + +
Sbjct: 243 KYTF-ELPQ------WKKVSESAKDLIRKXLTYVPSXRISARDALDHEWIQ 286
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 143 bits (361), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 98/312 (31%), Positives = 148/312 (47%), Gaps = 28/312 (8%)
Query: 1 MDKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLN-LREVKCLRKLNH 59
+ +Y K +G GA G V A+D VAIK+L + + + RE+ ++ +NH
Sbjct: 23 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 82
Query: 60 SNIVKL------KELIQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQG 113
NI+ L ++ ++ +Y+V E M+ NL Q++ + L+Q+ G
Sbjct: 83 KNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQME----LDHERMSYLLYQMLCG 138
Query: 114 LSYMHQNGFFHRDLKPENLLV-SQGIIKIADFGLAREIKSGPPYTNYVGSRWYRAPEILL 172
+ ++H G HRDLKP N++V S +KI DFGLAR + T YV +R+YRAPE++L
Sbjct: 139 IKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVIL 198
Query: 173 QSELYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQAR 232
Y D+W++G IM E+ LFPG DQ K+ LG+P+ + R
Sbjct: 199 GMG-YKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQPTVR 257
Query: 233 AIKYQFPQLPRANLSALMPS-------------ASQDAISLFESLCSWDPSKRPTAAEAL 279
P+ + L P ASQ A L + D SKR + EAL
Sbjct: 258 TYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQ-ARDLLSKMLVIDASKRISVDEAL 316
Query: 280 QHPFFKRCFYAP 291
QHP+ +Y P
Sbjct: 317 QHPYIN-VWYDP 327
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 143 bits (360), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 100/330 (30%), Positives = 163/330 (49%), Gaps = 47/330 (14%)
Query: 3 KYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELK-----QRYASWEDCLNLREVKCLRKL 57
+Y K +G+G+FG+V +A+D + VA+K ++ R A+ E +R ++ LRK
Sbjct: 98 RYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEE----IRILEHLRKQ 153
Query: 58 NHSNIVKLKELIQN---NNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGL 114
+ N + + +++N N + + FE + NLY+L+ + FS P ++ + + Q L
Sbjct: 154 DKDNTMNVIHMLENFTFRNHICMTFELLSMNLYELIKKNKFQGFSLPLVRKFAHSILQCL 213
Query: 115 SYMHQNGFFHRDLKPENLLVSQ---GIIKIADFGLAREIKSGPPYTNYVGSRWYRAPEIL 171
+H+N H DLKPEN+L+ Q IK+ DFG + + YT + SR+YRAPE++
Sbjct: 214 DALHKNRIIHCDLKPENILLKQQGRSGIKVIDFG-SSCYEHQRVYTX-IQSRFYRAPEVI 271
Query: 172 LQSELYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSP------------ 219
L + Y DMW++G I+AEL T PL PG E DQ+ + +LG P
Sbjct: 272 LGAR-YGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMIELLGMPSQKLLDASKRAK 330
Query: 220 ------------TMDSWADGL-----RQARAIKYQFPQLPRANLSALMPSASQDAISLFE 262
T+ + +DG ++R K + P R +AL + +
Sbjct: 331 NFVSXKGYPRYCTVTTLSDGSVVLNGGRSRRGKLRGPPESREWGNALKGCDDPLFLDFLK 390
Query: 263 SLCSWDPSKRPTAAEALQHPFFKRCFYAPP 292
WDP+ R T +AL+HP+ +R PP
Sbjct: 391 QCLEWDPAVRMTPGQALRHPWLRRRLPKPP 420
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 142 bits (359), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 95/291 (32%), Positives = 149/291 (51%), Gaps = 36/291 (12%)
Query: 10 LGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLN-LREVKCLRKLNHSNIVKLKEL 68
LG+G+FG V + D T + A+K + + A +D LREV+ L+KL+H NI+KL E+
Sbjct: 30 LGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEI 89
Query: 69 IQNNNRLYLVFECMEC-NLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQNGFFHRDL 127
+++++ Y+V E L+ + R R FSE + + QVF G++YMH++ HRDL
Sbjct: 90 LEDSSSFYIVGELYTGGELFDEIIKRKR--FSEHDAARIIKQVFSGITYMHKHNIVHRDL 147
Query: 128 KPENLLVSQG----IIKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQSELYSSKADM 183
KPEN+L+ IKI DFGL+ + + +G+ +Y APE+L + Y K D+
Sbjct: 148 KPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLRGT--YDEKCDV 205
Query: 184 WAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQARAIKYQFPQLPR 243
W+ G I+ L + P F G +E D L++ KY F LP+
Sbjct: 206 WSAGVILYILLSGTPPFYGKNEYDI-------------------LKRVETGKYAF-DLPQ 245
Query: 244 ANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFFKRCFYAPPHI 294
+ S DA L + ++ PS R TA + L+HP+ ++ P I
Sbjct: 246 WR------TISDDAKDLIRKMLTFHPSLRITATQCLEHPWIQKYSSETPTI 290
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 142 bits (357), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 98/312 (31%), Positives = 148/312 (47%), Gaps = 28/312 (8%)
Query: 1 MDKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLN-LREVKCLRKLNH 59
+ +Y K +G GA G V A+D VAIK+L + + + RE+ ++ +NH
Sbjct: 23 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 82
Query: 60 SNIVKL------KELIQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQG 113
NI+ L ++ ++ +Y+V E M+ NL Q++ + L+Q+ G
Sbjct: 83 KNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQME----LDHERMSYLLYQMLCG 138
Query: 114 LSYMHQNGFFHRDLKPENLLV-SQGIIKIADFGLAREIKSGPPYTNYVGSRWYRAPEILL 172
+ ++H G HRDLKP N++V S +KI DFGLAR + T YV +R+YRAPE++L
Sbjct: 139 IKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVIL 198
Query: 173 QSELYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQAR 232
Y D+W++G IM E+ LFPG DQ K+ LG+P+ + R
Sbjct: 199 GMG-YKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQPTVR 257
Query: 233 AIKYQFPQLPRANLSALMPS-------------ASQDAISLFESLCSWDPSKRPTAAEAL 279
P+ + L P ASQ A L + D SKR + EAL
Sbjct: 258 TYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQ-ARDLLSKMLVIDASKRISVDEAL 316
Query: 280 QHPFFKRCFYAP 291
QHP+ +Y P
Sbjct: 317 QHPYIN-VWYDP 327
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 141 bits (356), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 95/311 (30%), Positives = 146/311 (46%), Gaps = 26/311 (8%)
Query: 1 MDKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLN-LREVKCLRKLNH 59
+ +Y K +G GA G V A+D VAIK+L + + + RE+ ++ +NH
Sbjct: 23 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 82
Query: 60 SNIVKL------KELIQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQG 113
NI+ L ++ ++ +Y+V E M+ NL Q++ + L+Q+ G
Sbjct: 83 KNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQME----LDHERMSYLLYQMLCG 138
Query: 114 LSYMHQNGFFHRDLKPENLLV-SQGIIKIADFGLAREIKSGPPYTNYVGSRWYRAPEILL 172
+ ++H G HRDLKP N++V S +KI DFGLAR + T YV +R+YRAPE++L
Sbjct: 139 IKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVIL 198
Query: 173 QSELYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQAR 232
Y D+W++G IM E+ LFPG DQ K+ LG+P+ + R
Sbjct: 199 GMG-YKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQPTVR 257
Query: 233 AIKYQFPQLPRANLSALMPSA------------SQDAISLFESLCSWDPSKRPTAAEALQ 280
P+ + L P + A L + D SKR + EALQ
Sbjct: 258 TYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQ 317
Query: 281 HPFFKRCFYAP 291
HP+ +Y P
Sbjct: 318 HPYIN-VWYDP 327
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 141 bits (355), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 98/330 (29%), Positives = 159/330 (48%), Gaps = 47/330 (14%)
Query: 3 KYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELK-----QRYASWEDCLNLREVKCLRKL 57
+Y K +G+G FG+V +A+D + VA+K ++ R A+ E +R ++ LRK
Sbjct: 98 RYEVLKVIGKGXFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEE----IRILEHLRKQ 153
Query: 58 NHSNIVKLKELIQN---NNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGL 114
+ N + + +++N N + + FE + NLY+L+ + FS P ++ + + Q L
Sbjct: 154 DKDNTMNVIHMLENFTFRNHICMTFELLSMNLYELIKKNKFQGFSLPLVRKFAHSILQCL 213
Query: 115 SYMHQNGFFHRDLKPENLLVSQ---GIIKIADFGLAREIKSGPPYTNYVGSRWYRAPEIL 171
+H+N H DLKPEN+L+ Q IK+ DFG + + SR+YRAPE++
Sbjct: 214 DALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSS--CYEHQRVYXXIQSRFYRAPEVI 271
Query: 172 LQSELYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSP------------ 219
L + Y DMW++G I+AEL T PL PG E DQ+ + +LG P
Sbjct: 272 LGAR-YGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMIELLGMPXQKLLDASKRAK 330
Query: 220 ------------TMDSWADGL-----RQARAIKYQFPQLPRANLSALMPSASQDAISLFE 262
T+ + +DG ++R K + P R +AL + +
Sbjct: 331 NFVSXKGYPRYCTVTTLSDGSVVLNGGRSRRGKLRGPPESREWGNALKGCDDPLFLDFLK 390
Query: 263 SLCSWDPSKRPTAAEALQHPFFKRCFYAPP 292
WDP+ R T +AL+HP+ +R PP
Sbjct: 391 QCLEWDPAVRMTPGQALRHPWLRRRLPKPP 420
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 140 bits (354), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 95/311 (30%), Positives = 145/311 (46%), Gaps = 26/311 (8%)
Query: 1 MDKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLN-LREVKCLRKLNH 59
+ +Y K +G GA G V A+D VAIK+L + + + RE+ ++ +NH
Sbjct: 23 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 82
Query: 60 SNIVKL------KELIQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQG 113
NI+ L ++ ++ +Y+V E M+ NL Q++ + L+Q+ G
Sbjct: 83 KNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQME----LDHERMSYLLYQMLCG 138
Query: 114 LSYMHQNGFFHRDLKPENLLV-SQGIIKIADFGLAREIKSGPPYTNYVGSRWYRAPEILL 172
+ ++H G HRDLKP N++V S +KI DFGLAR + T YV +R+YRAPE++L
Sbjct: 139 IKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVIL 198
Query: 173 QSELYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQAR 232
Y D+W++G IM E+ LFPG DQ K+ LG+P + R
Sbjct: 199 GMG-YKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVR 257
Query: 233 AIKYQFPQLPRANLSALMPSA------------SQDAISLFESLCSWDPSKRPTAAEALQ 280
P+ + L P + A L + D SKR + EALQ
Sbjct: 258 TYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQ 317
Query: 281 HPFFKRCFYAP 291
HP+ +Y P
Sbjct: 318 HPYIN-VWYDP 327
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 140 bits (354), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 95/311 (30%), Positives = 145/311 (46%), Gaps = 26/311 (8%)
Query: 1 MDKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLN-LREVKCLRKLNH 59
+ +Y K +G GA G V A+D VAIK+L + + + RE+ ++ +NH
Sbjct: 24 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 83
Query: 60 SNIVKL------KELIQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQG 113
NI+ L ++ ++ +Y+V E M+ NL Q++ + L+Q+ G
Sbjct: 84 KNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQME----LDHERMSYLLYQMLCG 139
Query: 114 LSYMHQNGFFHRDLKPENLLV-SQGIIKIADFGLAREIKSGPPYTNYVGSRWYRAPEILL 172
+ ++H G HRDLKP N++V S +KI DFGLAR + T YV +R+YRAPE++L
Sbjct: 140 IKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVIL 199
Query: 173 QSELYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQAR 232
Y D+W++G IM E+ LFPG DQ K+ LG+P + R
Sbjct: 200 GMG-YKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVR 258
Query: 233 AIKYQFPQLPRANLSALMPSA------------SQDAISLFESLCSWDPSKRPTAAEALQ 280
P+ + L P + A L + D SKR + EALQ
Sbjct: 259 TYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQ 318
Query: 281 HPFFKRCFYAP 291
HP+ +Y P
Sbjct: 319 HPYIN-VWYDP 328
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 140 bits (353), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 94/291 (32%), Positives = 151/291 (51%), Gaps = 36/291 (12%)
Query: 2 DKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLN-LREVKCLRKLNHS 60
++Y+ LG+G+FG V + D T + A+K + + A +D LREV+ L+KL+H
Sbjct: 22 ERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHP 81
Query: 61 NIVKLKELIQNNNRLYLVFECMEC-NLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQ 119
NI+KL E++++++ Y+V E L+ + R R FSE + + QVF G++YMH+
Sbjct: 82 NIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKR--FSEHDAARIIKQVFSGITYMHK 139
Query: 120 NGFFHRDLKPENLLVSQG----IIKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQSE 175
+ HRDLKPEN+L+ IKI DFGL+ + + +G+ +Y APE+L +
Sbjct: 140 HNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLRGT- 198
Query: 176 LYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQARAIK 235
Y K D+W+ G I+ L + P F G +E D L++ K
Sbjct: 199 -YDEKCDVWSAGVILYILLSGTPPFYGKNEYDI-------------------LKRVETGK 238
Query: 236 YQFPQLPRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFFKR 286
Y F LP+ + S DA L + ++ PS R TA + L+HP+ ++
Sbjct: 239 YAF-DLPQWR------TISDDAKDLIRKMLTFHPSLRITATQCLEHPWIQK 282
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 140 bits (353), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 94/291 (32%), Positives = 151/291 (51%), Gaps = 36/291 (12%)
Query: 2 DKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLN-LREVKCLRKLNHS 60
++Y+ LG+G+FG V + D T + A+K + + A +D LREV+ L+KL+H
Sbjct: 22 ERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHP 81
Query: 61 NIVKLKELIQNNNRLYLVFECMEC-NLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQ 119
NI+KL E++++++ Y+V E L+ + R R FSE + + QVF G++YMH+
Sbjct: 82 NIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKR--FSEHDAARIIKQVFSGITYMHK 139
Query: 120 NGFFHRDLKPENLLVSQG----IIKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQSE 175
+ HRDLKPEN+L+ IKI DFGL+ + + +G+ +Y APE+L +
Sbjct: 140 HNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLRGT- 198
Query: 176 LYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQARAIK 235
Y K D+W+ G I+ L + P F G +E D L++ K
Sbjct: 199 -YDEKCDVWSAGVILYILLSGTPPFYGKNEYDI-------------------LKRVETGK 238
Query: 236 YQFPQLPRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFFKR 286
Y F LP+ + S DA L + ++ PS R TA + L+HP+ ++
Sbjct: 239 YAF-DLPQWR------TISDDAKDLIRKMLTFHPSLRITATQCLEHPWIQK 282
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 140 bits (353), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 98/324 (30%), Positives = 161/324 (49%), Gaps = 47/324 (14%)
Query: 3 KYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELK-----QRYASWEDCLNLREVKCLRKL 57
+Y K +G+G+FG+V +A+D + VA+K ++ R A+ E +R ++ LRK
Sbjct: 98 RYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEE----IRILEHLRKQ 153
Query: 58 NHSNIVKLKELIQN---NNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGL 114
+ N + + +++N N + + FE + NLY+L+ + FS P ++ + + Q L
Sbjct: 154 DKDNTMNVIHMLENFTFRNHICMTFELLSMNLYELIKKNKFQGFSLPLVRKFAHSILQCL 213
Query: 115 SYMHQNGFFHRDLKPENLLVSQ---GIIKIADFGLAREIKSGPPYTNYVGSRWYRAPEIL 171
+H+N H DLKPEN+L+ Q IK+ DFG + + YT + SR+YRAPE++
Sbjct: 214 DALHKNRIIHCDLKPENILLKQQGRSGIKVIDFG-SSCYEHQRVYTX-IQSRFYRAPEVI 271
Query: 172 LQSELYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSP------------ 219
L + Y DMW++G I+AEL T PL PG E DQ+ + +LG P
Sbjct: 272 LGAR-YGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMIELLGMPSQKLLDASKRAK 330
Query: 220 ------------TMDSWADGL-----RQARAIKYQFPQLPRANLSALMPSASQDAISLFE 262
T+ + +DG ++R K + P R +AL + +
Sbjct: 331 NFVSXKGYPRYCTVTTLSDGSVVLNGGRSRRGKLRGPPESREWGNALKGCDDPLFLDFLK 390
Query: 263 SLCSWDPSKRPTAAEALQHPFFKR 286
WDP+ R T +AL+HP+ +R
Sbjct: 391 QCLEWDPAVRMTPGQALRHPWLRR 414
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 139 bits (350), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 95/311 (30%), Positives = 145/311 (46%), Gaps = 26/311 (8%)
Query: 1 MDKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLN-LREVKCLRKLNH 59
+ +Y K +G GA G V A+D VAIK+L + + + RE+ ++ +NH
Sbjct: 28 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 87
Query: 60 SNIVKL------KELIQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQG 113
NI+ L ++ ++ +Y+V E M+ NL Q++ + L+Q+ G
Sbjct: 88 KNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQME----LDHERMSYLLYQMLCG 143
Query: 114 LSYMHQNGFFHRDLKPENLLV-SQGIIKIADFGLAREIKSGPPYTNYVGSRWYRAPEILL 172
+ ++H G HRDLKP N++V S +KI DFGLAR + T YV +R+YRAPE++L
Sbjct: 144 IKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVIL 203
Query: 173 QSELYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQAR 232
Y D+W++G IM E+ LFPG DQ K+ LG+P + R
Sbjct: 204 GMG-YKENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVR 262
Query: 233 AIKYQFPQLPRANLSALMPSA------------SQDAISLFESLCSWDPSKRPTAAEALQ 280
P+ + L P + A L + D SKR + EALQ
Sbjct: 263 TYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQ 322
Query: 281 HPFFKRCFYAP 291
HP+ +Y P
Sbjct: 323 HPYIN-VWYDP 332
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 139 bits (350), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 95/311 (30%), Positives = 145/311 (46%), Gaps = 26/311 (8%)
Query: 1 MDKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLN-LREVKCLRKLNH 59
+ +Y K +G GA G V A+D VAIK+L + + + RE+ ++ +NH
Sbjct: 17 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 76
Query: 60 SNIVKL------KELIQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQG 113
NI+ L ++ ++ +Y+V E M+ NL Q++ + L+Q+ G
Sbjct: 77 KNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQME----LDHERMSYLLYQMLCG 132
Query: 114 LSYMHQNGFFHRDLKPENLLV-SQGIIKIADFGLAREIKSGPPYTNYVGSRWYRAPEILL 172
+ ++H G HRDLKP N++V S +KI DFGLAR + T YV +R+YRAPE++L
Sbjct: 133 IKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVIL 192
Query: 173 QSELYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQAR 232
Y D+W++G IM E+ LFPG DQ K+ LG+P + R
Sbjct: 193 GMG-YKENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVR 251
Query: 233 AIKYQFPQLPRANLSALMPSA------------SQDAISLFESLCSWDPSKRPTAAEALQ 280
P+ + L P + A L + D SKR + EALQ
Sbjct: 252 TYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQ 311
Query: 281 HPFFKRCFYAP 291
HP+ +Y P
Sbjct: 312 HPYIN-VWYDP 321
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 137 bits (346), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 93/311 (29%), Positives = 144/311 (46%), Gaps = 26/311 (8%)
Query: 1 MDKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLN-LREVKCLRKLNH 59
+ +Y K +G GA G V A+D VAIK+L + + + RE+ ++ +NH
Sbjct: 25 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 84
Query: 60 SNIVKL------KELIQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQG 113
NI+ L ++ ++ +Y+V E M+ NL Q++ + L+Q+ G
Sbjct: 85 KNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQME----LDHERMSYLLYQMLCG 140
Query: 114 LSYMHQNGFFHRDLKPENLLV-SQGIIKIADFGLAREIKSGPPYTNYVGSRWYRAPEILL 172
+ ++H G HRDLKP N++V S +KI DFGLAR + +V +R+YRAPE++L
Sbjct: 141 IKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMVPFVVTRYYRAPEVIL 200
Query: 173 QSELYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQAR 232
Y D+W++G IM E+ LFPG DQ K+ LG+P + R
Sbjct: 201 GMG-YKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVR 259
Query: 233 AIKYQFPQLPRANLSALMPSA------------SQDAISLFESLCSWDPSKRPTAAEALQ 280
P+ + L P + A L + D SKR + EALQ
Sbjct: 260 TYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQ 319
Query: 281 HPFFKRCFYAP 291
HP+ +Y P
Sbjct: 320 HPYIN-VWYDP 329
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 137 bits (345), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 96/314 (30%), Positives = 154/314 (49%), Gaps = 32/314 (10%)
Query: 1 MDKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLN-LREVKCLRKLNH 59
+ +Y K +G GA G V A+D VAIK+L + + + RE+ ++ +NH
Sbjct: 23 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 82
Query: 60 SNIVKL------KELIQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQG 113
NI+ L ++ ++ +Y+V E M+ NL Q++ + L+Q+ G
Sbjct: 83 KNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQME----LDHERMSYLLYQMLCG 138
Query: 114 LSYMHQNGFFHRDLKPENLLV-SQGIIKIADFGLAREIKSGPPYTNYVGSRWYRAPEILL 172
+ ++H G HRDLKP N++V S +KI DFGLAR + T V +R+YRAPE++L
Sbjct: 139 IKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPEVVTRYYRAPEVIL 198
Query: 173 QSELYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGS----------PTMD 222
Y D+W++G IM E+ LFPG DQ K+ LG+ PT+
Sbjct: 199 GMG-YKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVR 257
Query: 223 SWADGLRQARAIKYQ--FPQL---PRANLSALMPSASQDAISLFESLCSWDPSKRPTAAE 277
++ + + ++ FP + + +AL S ++D L + D SKR + E
Sbjct: 258 TYVENRPKYAGYSFEKLFPDVLFPADSEHNALKASQARD---LLSKMLVIDASKRISVDE 314
Query: 278 ALQHPFFKRCFYAP 291
ALQHP+ +Y P
Sbjct: 315 ALQHPYIN-VWYDP 327
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 136 bits (342), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 99/319 (31%), Positives = 160/319 (50%), Gaps = 41/319 (12%)
Query: 3 KYSGFKELGRGAFGRVFQAFDEHTGEAV--AIKELKQRYASWEDCLNLREVKCLRKLNHS 60
+Y G K +GRG +G V++A + + A+K+++ S C RE+ LR+L H
Sbjct: 23 EYEGCK-VGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGISMSAC---REIALLRELKHP 78
Query: 61 NIVKLKE--LIQNNNRLYLVFECMECNLYQLM-----AARDRKLFSEPE--IKAWLFQVF 111
N++ L++ L + +++L+F+ E +L+ ++ + ++K P +K+ L+Q+
Sbjct: 79 NVISLQKVFLSHADRKVWLLFDYAEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQIL 138
Query: 112 QGLSYMHQNGFFHRDLKPENLLV-----SQGIIKIADFGLAREIKSG-PPYTN---YVGS 162
G+ Y+H N HRDLKP N+LV +G +KIAD G AR S P + V +
Sbjct: 139 DGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVT 198
Query: 163 RWYRAPEILLQSELYSSKADMWAMGAIMAELFTFCPLFPGASE---------ADQMYKIC 213
WYRAPE+LL + Y+ D+WA+G I AEL T P+F E DQ+ +I
Sbjct: 199 FWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIF 258
Query: 214 GVLGSPTMDSWAD--GLRQARAIKYQFPQLPRANLSAL------MPSASQDAISLFESLC 265
V+G P W D + + + F + N S + A L + L
Sbjct: 259 NVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLL 318
Query: 266 SWDPSKRPTAAEALQHPFF 284
+ DP KR T+ +A+Q P+F
Sbjct: 319 TMDPIKRITSEQAMQDPYF 337
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 133 bits (335), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 93/311 (29%), Positives = 143/311 (45%), Gaps = 26/311 (8%)
Query: 1 MDKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLN-LREVKCLRKLNH 59
+ +Y K +G GA G V A+D VAIK+L + + + RE+ ++ +NH
Sbjct: 23 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 82
Query: 60 SNIVKL------KELIQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQG 113
NI+ L ++ ++ +Y+V E M+ NL Q++ + L+Q+ G
Sbjct: 83 KNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQME----LDHERMSYLLYQMLCG 138
Query: 114 LSYMHQNGFFHRDLKPENLLV-SQGIIKIADFGLAREIKSGPPYTNYVGSRWYRAPEILL 172
+ ++H G HRDLKP N++V S +KI DFGLAR + V +R+YRAPE++L
Sbjct: 139 IKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMEPEVVTRYYRAPEVIL 198
Query: 173 QSELYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQAR 232
Y D+W++G IM E+ LFPG DQ K+ LG+P + R
Sbjct: 199 GMG-YKENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVR 257
Query: 233 AIKYQFPQLPRANLSALMPSA------------SQDAISLFESLCSWDPSKRPTAAEALQ 280
P+ + L P + A L + D SKR + EALQ
Sbjct: 258 TYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQ 317
Query: 281 HPFFKRCFYAP 291
HP+ +Y P
Sbjct: 318 HPYIN-VWYDP 327
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 132 bits (333), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 92/301 (30%), Positives = 160/301 (53%), Gaps = 21/301 (6%)
Query: 1 MDKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQ--RYASWEDCLNLREVKCLRKLN 58
MD++ + G+G FG V ++ TG +VAIK++ Q R+ + E L+ ++ L L+
Sbjct: 22 MDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRFRNRE----LQIMQDLAVLH 77
Query: 59 HSNIVKLKELI-----QNNNRLYL--VFECMECNLYQLMAARDRKLFSEPEI--KAWLFQ 109
H NIV+L+ ++ +YL V E + L++ R+ + P I K +LFQ
Sbjct: 78 HPNIVQLQSYFYTLGERDRRDIYLNVVMEYVPDTLHRCCRNYYRRQVAPPPILIKVFLFQ 137
Query: 110 VFQGLSYMH--QNGFFHRDLKPENLLVSQ--GIIKIADFGLAREIKSGPPYTNYVGSRWY 165
+ + + +H HRD+KP N+LV++ G +K+ DFG A+++ P Y+ SR+Y
Sbjct: 138 LIRSIGCLHLPSVNVCHRDIKPHNVLVNEADGTLKLCDFGSAKKLSPSEPNVAYICSRYY 197
Query: 166 RAPEILLQSELYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWA 225
RAPE++ ++ Y++ D+W++G I AE+ P+F G + A Q+++I VLG P+ +
Sbjct: 198 RAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLHEIVRVLGCPSREVLR 257
Query: 226 D-GLRQARAIKYQFPQLPRANL-SALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPF 283
Y +P +N+ S +++A L +L + P +R EAL HP+
Sbjct: 258 KLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALCHPY 317
Query: 284 F 284
F
Sbjct: 318 F 318
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 132 bits (332), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 90/290 (31%), Positives = 138/290 (47%), Gaps = 37/290 (12%)
Query: 2 DKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLN--LREVKCLRKLNH 59
D+Y K+LG GA+G V D+ TG AIK +K+ + L EV L++L+H
Sbjct: 21 DRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDH 80
Query: 60 SNIVKLKELIQNNNRLYLVFECMECN-LYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMH 118
NI+KL E ++ YLV E L+ + R + FSE + + QV G +Y+H
Sbjct: 81 PNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQK--FSEVDAAVIMKQVLSGTTYLH 138
Query: 119 QNGFFHRDLKPENLLVS----QGIIKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQS 174
++ HRDLKPENLL+ +IKI DFGL+ + G +G+ +Y APE+L +
Sbjct: 139 KHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKERLGTAYYIAPEVLRKK 198
Query: 175 ELYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQARAI 234
Y K D+W+ G I+ L P F G ++ + + ++ S W
Sbjct: 199 --YDEKCDVWSCGVILYILLCGYPPFGGQTDQEILKRVEKGKFSFDPPDWT--------- 247
Query: 235 KYQFPQLPRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFF 284
S +A L + + +++PSKR +A EAL HP+
Sbjct: 248 -----------------QVSDEAKQLVKLMLTYEPSKRISAEEALNHPWI 280
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 132 bits (332), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 94/301 (31%), Positives = 145/301 (48%), Gaps = 42/301 (13%)
Query: 2 DKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLN--LREVKCLRKLNH 59
D+Y K+LG GA+G V D+ TG AIK +K+ + L EV L++L+H
Sbjct: 4 DRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDH 63
Query: 60 SNIVKLKELIQNNNRLYLVFECMECN-LYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMH 118
NI+KL E ++ YLV E L+ + R + FSE + + QV G +Y+H
Sbjct: 64 PNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQK--FSEVDAAVIMKQVLSGTTYLH 121
Query: 119 QNGFFHRDLKPENLLVS----QGIIKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQS 174
++ HRDLKPENLL+ +IKI DFGL+ + G +G+ +Y APE+L +
Sbjct: 122 KHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKERLGTAYYIAPEVLRKK 181
Query: 175 ELYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQARAI 234
Y K D+W+ G I+ L P F G ++ + L++
Sbjct: 182 --YDEKCDVWSCGVILYILLCGYPPFGGQTDQEI-------------------LKRVEKG 220
Query: 235 KYQF--PQLPRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFFKRCFYAPP 292
K+ F P + S +A L + + +++PSKR +A EAL HP+ + F +
Sbjct: 221 KFSFDPPDWTQ---------VSDEAKQLVKLMLTYEPSKRISAEEALNHPWIVK-FCSQK 270
Query: 293 H 293
H
Sbjct: 271 H 271
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 132 bits (331), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 97/317 (30%), Positives = 152/317 (47%), Gaps = 38/317 (11%)
Query: 1 MDKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLN-LREVKCLRKLNH 59
+ +Y K +G GA G V A+D VAIK+L + + + RE+ ++ +NH
Sbjct: 23 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 82
Query: 60 SNIVKL------KELIQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQG 113
NI+ L ++ ++ +Y+V E M+ NL Q++ + L+Q+ G
Sbjct: 83 KNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQME----LDHERMSYLLYQMLCG 138
Query: 114 LSYMHQNGFFHRDLKPENLLV-SQGIIKIADFGLAREIKSGPPYTNYVGSRWYRAPEILL 172
+ ++H G HRDLKP N++V S +KI DFGLAR + V +R+YRAPE++L
Sbjct: 139 IKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMEPEVVTRYYRAPEVIL 198
Query: 173 QSELYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGS----------PTMD 222
Y D+W++G IM E+ LFPG DQ K+ LG+ PT+
Sbjct: 199 GMG-YKENVDIWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTPCPAFMKKLQPTVR 257
Query: 223 SWADGLRQARAIKYQFPQL-PRANLSALMPSASQ-------DAISLFESLCSWDPSKRPT 274
++ + + + Y F +L P L P+ S+ A L + D SKR +
Sbjct: 258 NYVEN--RPKYAGYSFEKLFP----DVLFPADSEHNKLKASQARDLLSKMLVIDASKRIS 311
Query: 275 AAEALQHPFFKRCFYAP 291
EALQHP+ +Y P
Sbjct: 312 VDEALQHPYIN-VWYDP 327
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 131 bits (329), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 92/289 (31%), Positives = 145/289 (50%), Gaps = 35/289 (12%)
Query: 2 DKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLNL-REVKCLRKLNHS 60
D Y +ELG+GAF V + + TG A K + + S D L RE + RKL H
Sbjct: 29 DNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHP 88
Query: 61 NIVKLKELIQNNNRLYLVFECMECN-LYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQ 119
NIV+L + IQ + YLVF+ + L++ + AR+ +SE + + Q+ + ++Y H
Sbjct: 89 NIVRLHDSIQEESFHYLVFDLVTGGELFEDIVARE--FYSEADASHCIQQILESIAYCHS 146
Query: 120 NGFFHRDLKPENLLVSQ----GIIKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQSE 175
NG HR+LKPENLL++ +K+ADFGLA E+ + + G+ Y +PE+ L+ +
Sbjct: 147 NGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEV-LKKD 205
Query: 176 LYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQARAIK 235
YS D+WA G I+ L P F + ++Y Q +A
Sbjct: 206 PYSKPVDIWACGVILYILLVGYPPF-WDEDQHRLYA------------------QIKAGA 246
Query: 236 YQFPQLPRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFF 284
Y +P S + + +A SL +S+ + +P KR TA +AL+ P+
Sbjct: 247 YDYP-------SPEWDTVTPEAKSLIDSMLTVNPKKRITADQALKVPWI 288
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 130 bits (326), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 92/289 (31%), Positives = 145/289 (50%), Gaps = 35/289 (12%)
Query: 2 DKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLNL-REVKCLRKLNHS 60
D Y +ELG+GAF V + + TG A K + + S D L RE + RKL H
Sbjct: 6 DNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHP 65
Query: 61 NIVKLKELIQNNNRLYLVFECMECN-LYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQ 119
NIV+L + IQ + YLVF+ + L++ + AR+ +SE + + Q+ + ++Y H
Sbjct: 66 NIVRLHDSIQEESFHYLVFDLVTGGELFEDIVARE--FYSEADASHCIQQILESIAYCHS 123
Query: 120 NGFFHRDLKPENLLVSQ----GIIKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQSE 175
NG HR+LKPENLL++ +K+ADFGLA E+ + + G+ Y +PE+ L+ +
Sbjct: 124 NGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEV-LKKD 182
Query: 176 LYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQARAIK 235
YS D+WA G I+ L P F + ++Y Q +A
Sbjct: 183 PYSKPVDIWACGVILYILLVGYPPF-WDEDQHRLYA------------------QIKAGA 223
Query: 236 YQFPQLPRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFF 284
Y +P S + + +A SL +S+ + +P KR TA +AL+ P+
Sbjct: 224 YDYP-------SPEWDTVTPEAKSLIDSMLTVNPKKRITADQALKVPWI 265
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 130 bits (326), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 92/289 (31%), Positives = 145/289 (50%), Gaps = 35/289 (12%)
Query: 2 DKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLNL-REVKCLRKLNHS 60
D Y +ELG+GAF V + + TG A K + + S D L RE + RKL H
Sbjct: 6 DNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHP 65
Query: 61 NIVKLKELIQNNNRLYLVFECMECN-LYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQ 119
NIV+L + IQ + YLVF+ + L++ + AR+ +SE + + Q+ + ++Y H
Sbjct: 66 NIVRLHDSIQEESFHYLVFDLVTGGELFEDIVARE--FYSEADASHCIQQILESIAYCHS 123
Query: 120 NGFFHRDLKPENLLVSQ----GIIKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQSE 175
NG HR+LKPENLL++ +K+ADFGLA E+ + + G+ Y +PE+ L+ +
Sbjct: 124 NGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEV-LKKD 182
Query: 176 LYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQARAIK 235
YS D+WA G I+ L P F + ++Y Q +A
Sbjct: 183 PYSKPVDIWACGVILYILLVGYPPF-WDEDQHRLYA------------------QIKAGA 223
Query: 236 YQFPQLPRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFF 284
Y +P S + + +A SL +S+ + +P KR TA +AL+ P+
Sbjct: 224 YDYP-------SPEWDTVTPEAKSLIDSMLTVNPKKRITADQALKVPWI 265
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 130 bits (326), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 92/289 (31%), Positives = 145/289 (50%), Gaps = 35/289 (12%)
Query: 2 DKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLNL-REVKCLRKLNHS 60
D Y +ELG+GAF V + + TG A K + + S D L RE + RKL H
Sbjct: 5 DNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHP 64
Query: 61 NIVKLKELIQNNNRLYLVFECMECN-LYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQ 119
NIV+L + IQ + YLVF+ + L++ + AR+ +SE + + Q+ + ++Y H
Sbjct: 65 NIVRLHDSIQEESFHYLVFDLVTGGELFEDIVARE--FYSEADASHCIQQILESIAYCHS 122
Query: 120 NGFFHRDLKPENLLVSQ----GIIKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQSE 175
NG HR+LKPENLL++ +K+ADFGLA E+ + + G+ Y +PE+ L+ +
Sbjct: 123 NGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEV-LKKD 181
Query: 176 LYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQARAIK 235
YS D+WA G I+ L P F + ++Y Q +A
Sbjct: 182 PYSKPVDIWACGVILYILLVGYPPF-WDEDQHRLYA------------------QIKAGA 222
Query: 236 YQFPQLPRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFF 284
Y +P S + + +A SL +S+ + +P KR TA +AL+ P+
Sbjct: 223 YDYP-------SPEWDTVTPEAKSLIDSMLTVNPKKRITADQALKVPWI 264
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 129 bits (324), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 88/308 (28%), Positives = 146/308 (47%), Gaps = 45/308 (14%)
Query: 2 DKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLNLREVKCLRKLNHS- 60
D Y ++LGRG + VF+A + E V +K LK + RE+K L L
Sbjct: 37 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILK----PVKKNKIKREIKILENLRGGP 92
Query: 61 NIVKLKELIQN--NNRLYLVFECMECN----LYQLMAARDRKLFSEPEIKAWLFQVFQGL 114
NI+ L +++++ + LVFE + LYQ + D I+ +++++ + L
Sbjct: 93 NIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQTLTDYD--------IRFYMYEILKAL 144
Query: 115 SYMHQNGFFHRDLKPENLLVSQGI--IKIADFGLAREIKSGPPYTNYVGSRWYRAPEILL 172
Y H G HRD+KP N+++ +++ D+GLA G Y V SR+++ PE+L+
Sbjct: 145 DYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLV 204
Query: 173 QSELYSSKADMWAMGAIMAE-LFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQA 231
++Y DMW++G ++A +F P F G DQ+ +I VLG+ + + D
Sbjct: 205 DYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYID----- 259
Query: 232 RAIKYQFPQLPRAN----------LSALMPSASQ-----DAISLFESLCSWDPSKRPTAA 276
KY PR N + S +Q +A+ + L +D R TA
Sbjct: 260 ---KYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAR 316
Query: 277 EALQHPFF 284
EA++HP+F
Sbjct: 317 EAMEHPYF 324
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 127 bits (320), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 88/288 (30%), Positives = 141/288 (48%), Gaps = 36/288 (12%)
Query: 4 YSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWE-DCLNLREVKCLRKLNHSNI 62
Y K+LG GA+G V D+ T AIK +++ S + L EV L+ L+H NI
Sbjct: 39 YQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNI 98
Query: 63 VKLKELIQNNNRLYLVFECMEC-NLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQNG 121
+KL + ++ YLV EC + L+ + R + F+E + + QV G++Y+H++
Sbjct: 99 MKLYDFFEDKRNYYLVMECYKGGELFDEIIHRMK--FNEVDAAVIIKQVLSGVTYLHKHN 156
Query: 122 FFHRDLKPENLLVS----QGIIKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQSELY 177
HRDLKPENLL+ +IKI DFGL+ ++ +G+ +Y APE+L + Y
Sbjct: 157 IVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKKMKERLGTAYYIAPEVLRKK--Y 214
Query: 178 SSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQARAIKYQ 237
K D+W++G I+ L P F G ++ + LR+ KY
Sbjct: 215 DEKCDVWSIGVILFILLAGYPPFGGQTDQEI-------------------LRKVEKGKYT 255
Query: 238 FPQLPRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFFK 285
F N+ S+ A L + + +D +R +A +AL+HP+ K
Sbjct: 256 FDSPEWKNV-------SEGAKDLIKQMLQFDSQRRISAQQALEHPWIK 296
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 127 bits (319), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 92/290 (31%), Positives = 145/290 (50%), Gaps = 36/290 (12%)
Query: 2 DKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLNL-REVKCLRKLNHS 60
D+Y F+ELG+GAF V + TG+ A K + + S D L RE + R L H
Sbjct: 4 DEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKHP 63
Query: 61 NIVKLKELIQNNNRLYLVFECMECN-LYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQ 119
NIV+L + I YLVF+ + L++ + AR+ +SE + + Q+ + +++ H
Sbjct: 64 NIVRLHDSISEEGFHYLVFDLVTGGELFEDIVARE--YYSEADASHCIQQILESVNHCHL 121
Query: 120 NGFFHRDLKPENLLVSQ----GIIKIADFGLAREIKSG-PPYTNYVGSRWYRAPEILLQS 174
NG HRDLKPENLL++ +K+ADFGLA E++ + + G+ Y +PE+ L+
Sbjct: 122 NGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEV-LRK 180
Query: 175 ELYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQARAI 234
+ Y DMWA G I+ L P F + ++Y+ Q +A
Sbjct: 181 DPYGKPVDMWACGVILYILLVGYPPF-WDEDQHRLYQ------------------QIKAG 221
Query: 235 KYQFPQLPRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFF 284
Y FP S + + +A L + + +P+KR TA+EAL+HP+
Sbjct: 222 AYDFP-------SPEWDTVTPEAKDLINKMLTINPAKRITASEALKHPWI 264
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 127 bits (318), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 92/290 (31%), Positives = 145/290 (50%), Gaps = 36/290 (12%)
Query: 2 DKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLNL-REVKCLRKLNHS 60
D+Y F+ELG+GAF V + TG+ A K + + S D L RE + R L H
Sbjct: 4 DEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKHP 63
Query: 61 NIVKLKELIQNNNRLYLVFECMECN-LYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQ 119
NIV+L + I YLVF+ + L++ + AR+ +SE + + Q+ + +++ H
Sbjct: 64 NIVRLHDSISEEGFHYLVFDLVTGGELFEDIVARE--YYSEADASHCIQQILESVNHCHL 121
Query: 120 NGFFHRDLKPENLLVSQ----GIIKIADFGLAREIKSG-PPYTNYVGSRWYRAPEILLQS 174
NG HRDLKPENLL++ +K+ADFGLA E++ + + G+ Y +PE+ L+
Sbjct: 122 NGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEV-LRK 180
Query: 175 ELYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQARAI 234
+ Y DMWA G I+ L P F + ++Y+ Q +A
Sbjct: 181 DPYGKPVDMWACGVILYILLVGYPPF-WDEDQHRLYQ------------------QIKAG 221
Query: 235 KYQFPQLPRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFF 284
Y FP S + + +A L + + +P+KR TA+EAL+HP+
Sbjct: 222 AYDFP-------SPEWDTVTPEAKDLINKMLTINPAKRITASEALKHPWI 264
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 122 bits (306), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 90/289 (31%), Positives = 144/289 (49%), Gaps = 36/289 (12%)
Query: 2 DKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLNL-REVKCLRKLNHS 60
D+Y ++++G+GAF V + TG A K + + S D L RE + R L HS
Sbjct: 4 DEYQLYEDIGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLEREARICRLLKHS 63
Query: 61 NIVKLKELIQNNNRLYLVFECMECN-LYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQ 119
NIV+L + I YLVF+ + L++ + AR+ +SE + + Q+ + + + HQ
Sbjct: 64 NIVRLHDSISEEGFHYLVFDLVTGGELFEDIVARE--YYSEADASHCIQQILEAVLHCHQ 121
Query: 120 NGFFHRDLKPENLLVSQ----GIIKIADFGLAREIKSG-PPYTNYVGSRWYRAPEILLQS 174
G HRDLKPENLL++ +K+ADFGLA E++ + + G+ Y +PE+ L+
Sbjct: 122 MGVVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEV-LRK 180
Query: 175 ELYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQARAI 234
E Y D+WA G I+ L P F + ++Y+ Q +A
Sbjct: 181 EAYGKPVDIWACGVILYILLVGYPPF-WDEDQHKLYQ------------------QIKAG 221
Query: 235 KYQFPQLPRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPF 283
Y FP S + + +A +L + + +P+KR TA EAL+HP+
Sbjct: 222 AYDFP-------SPEWDTVTPEAKNLINQMLTINPAKRITAHEALKHPW 263
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 122 bits (305), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 90/288 (31%), Positives = 142/288 (49%), Gaps = 36/288 (12%)
Query: 4 YSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLNL-REVKCLRKLNHSNI 62
Y F+ELG+GAF V + G+ A K + + S D L RE + R L H NI
Sbjct: 24 YQLFEELGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNI 83
Query: 63 VKLKELIQNNNRLYLVFECMECN-LYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQNG 121
V+L + I YL+F+ + L++ + AR+ +SE + + Q+ + + + HQ G
Sbjct: 84 VRLHDSISEEGHHYLIFDLVTGGELFEDIVARE--YYSEADASHCIQQILEAVLHCHQMG 141
Query: 122 FFHRDLKPENLLVSQGI----IKIADFGLAREIKS-GPPYTNYVGSRWYRAPEILLQSEL 176
HRDLKPENLL++ + +K+ADFGLA E++ + + G+ Y +PE+ L+ +
Sbjct: 142 VVHRDLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTPGYLSPEV-LRKDP 200
Query: 177 YSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQARAIKY 236
Y D+WA G I+ L P F + ++Y+ Q +A Y
Sbjct: 201 YGKPVDLWACGVILYILLVGYPPF-WDEDQHRLYQ------------------QIKAGAY 241
Query: 237 QFPQLPRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFF 284
FP S + + +A L + + +PSKR TAAEAL+HP+
Sbjct: 242 DFP-------SPEWDTVTPEAKDLINKMLTINPSKRITAAEALKHPWI 282
>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|B Chain B, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|C Chain C, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|D Chain D, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2WO6|A Chain A, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
pdb|2WO6|B Chain B, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
Length = 382
Score = 121 bits (304), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 102/332 (30%), Positives = 148/332 (44%), Gaps = 50/332 (15%)
Query: 1 MDKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLNLREVKCLRKLNHS 60
MD+Y +G+G+FG+V +A+D E VAIK +K + A EV+ L +N
Sbjct: 53 MDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQ--IEVRLLELMNKH 110
Query: 61 N------IVKLKELIQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGL 114
+ IV LK N L LVFE + NLY L+ + + S + + Q+ L
Sbjct: 111 DTEMKYYIVHLKRHFMFRNHLCLVFEMLSYNLYDLLRNTNFRGVSLNLTRKFAQQMCTAL 170
Query: 115 SYMH--QNGFFHRDLKPENLLV---SQGIIKIADFGLAREIKSGPPYTNYVGSRWYRAPE 169
++ + H DLKPEN+L+ + IKI DFG + ++ G + SR+YR+PE
Sbjct: 171 LFLATPELSIIHCDLKPENILLCNPKRSAIKIVDFGSSCQL--GQRIYQXIQSRFYRSPE 228
Query: 170 ILLQSELYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSP---------- 219
+LL Y DMW++G I+ E+ T PLF GA+E DQM KI VLG P
Sbjct: 229 VLLGMP-YDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIVEVLGIPPAHILDQAPK 287
Query: 220 -------------TMDSWADGLRQAR-----------AIKYQFPQLPRANLSALMPSASQ 255
+ DG R+ + ++ P RA S +
Sbjct: 288 ARKFFEKLPDGTWNLKKTKDGKREYKPPGTRKLHNILGVETGGPGGRRAGESGHTVADYL 347
Query: 256 DAISLFESLCSWDPSKRPTAAEALQHPFFKRC 287
L + +DP R ALQH FFK+
Sbjct: 348 KFKDLILRMLDYDPKTRIQPYYALQHSFFKKT 379
>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|B Chain B, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|C Chain C, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|D Chain D, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANR|A Chain A, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|B Chain B, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|C Chain C, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|D Chain D, Human Dyrk1aHARMINE COMPLEX
Length = 368
Score = 121 bits (304), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 102/332 (30%), Positives = 148/332 (44%), Gaps = 50/332 (15%)
Query: 1 MDKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLNLREVKCLRKLNHS 60
MD+Y +G+G+FG+V +A+D E VAIK +K + A EV+ L +N
Sbjct: 34 MDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQ--IEVRLLELMNKH 91
Query: 61 N------IVKLKELIQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGL 114
+ IV LK N L LVFE + NLY L+ + + S + + Q+ L
Sbjct: 92 DTEMKYYIVHLKRHFMFRNHLCLVFEMLSYNLYDLLRNTNFRGVSLNLTRKFAQQMCTAL 151
Query: 115 SYMH--QNGFFHRDLKPENLLV---SQGIIKIADFGLAREIKSGPPYTNYVGSRWYRAPE 169
++ + H DLKPEN+L+ + IKI DFG + ++ G + SR+YR+PE
Sbjct: 152 LFLATPELSIIHCDLKPENILLCNPKRSAIKIVDFGSSCQL--GQRIYQXIQSRFYRSPE 209
Query: 170 ILLQSELYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSP---------- 219
+LL Y DMW++G I+ E+ T PLF GA+E DQM KI VLG P
Sbjct: 210 VLLGMP-YDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIVEVLGIPPAHILDQAPK 268
Query: 220 -------------TMDSWADGLRQAR-----------AIKYQFPQLPRANLSALMPSASQ 255
+ DG R+ + ++ P RA S +
Sbjct: 269 ARKFFEKLPDGTWNLKKTKDGKREYKPPGTRKLHNILGVETGGPGGRRAGESGHTVADYL 328
Query: 256 DAISLFESLCSWDPSKRPTAAEALQHPFFKRC 287
L + +DP R ALQH FFK+
Sbjct: 329 KFKDLILRMLDYDPKTRIQPYYALQHSFFKKT 360
>pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|B Chain B, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|C Chain C, Human Dyrk1a In Complex With Leucettine L41
Length = 382
Score = 121 bits (303), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 102/332 (30%), Positives = 148/332 (44%), Gaps = 50/332 (15%)
Query: 1 MDKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLNLREVKCLRKLNHS 60
MD+Y +G+G+FG+V +A+D E VAIK +K + A EV+ L +N
Sbjct: 53 MDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQ--IEVRLLELMNKH 110
Query: 61 N------IVKLKELIQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGL 114
+ IV LK N L LVFE + NLY L+ + + S + + Q+ L
Sbjct: 111 DTEMKYYIVHLKRHFMFRNHLCLVFEMLSYNLYDLLRNTNFRGVSLNLTRKFAQQMCTAL 170
Query: 115 SYMH--QNGFFHRDLKPENLLV---SQGIIKIADFGLAREIKSGPPYTNYVGSRWYRAPE 169
++ + H DLKPEN+L+ + IKI DFG + ++ G + SR+YR+PE
Sbjct: 171 LFLATPELSIIHCDLKPENILLCNPKRXAIKIVDFGSSCQL--GQRIYQXIQSRFYRSPE 228
Query: 170 ILLQSELYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSP---------- 219
+LL Y DMW++G I+ E+ T PLF GA+E DQM KI VLG P
Sbjct: 229 VLLGMP-YDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIVEVLGIPPAHILDQAPK 287
Query: 220 -------------TMDSWADGLRQAR-----------AIKYQFPQLPRANLSALMPSASQ 255
+ DG R+ + ++ P RA S +
Sbjct: 288 ARKFFEKLPDGTWNLKKTKDGKREYKPPGTRKLHNILGVETGGPGGRRAGESGHTVADYL 347
Query: 256 DAISLFESLCSWDPSKRPTAAEALQHPFFKRC 287
L + +DP R ALQH FFK+
Sbjct: 348 KFKDLILRMLDYDPKTRIQPYYALQHSFFKKT 379
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 120 bits (302), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 71/233 (30%), Positives = 124/233 (53%), Gaps = 5/233 (2%)
Query: 1 MDKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELK-QRYASWEDCLNLREVKCLRKLNH 59
M+KY +++G G+FG+ G IKE+ R +S E + REV L + H
Sbjct: 23 MEKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKH 82
Query: 60 SNIVKLKELIQNNNRLYLVFE-CMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMH 118
NIV+ +E + N LY+V + C +L++ + A+ LF E +I W Q+ L ++H
Sbjct: 83 PNIVQYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVH 142
Query: 119 QNGFFHRDLKPENLLVSQ-GIIKIADFGLAREIKSGPPYTNY-VGSRWYRAPEILLQSEL 176
HRD+K +N+ +++ G +++ DFG+AR + S +G+ +Y +PEI +++
Sbjct: 143 DRKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVELARACIGTPYYLSPEI-CENKP 201
Query: 177 YSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLR 229
Y++K+D+WA+G ++ EL T F S + + KI P ++ LR
Sbjct: 202 YNNKSDIWALGCVLYELCTLKHAFEAGSMKNLVLKIISGSFPPVSLHYSYDLR 254
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 119 bits (299), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 92/297 (30%), Positives = 137/297 (46%), Gaps = 44/297 (14%)
Query: 2 DKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYA-------SWEDCLNLREVKCL 54
D Y +ELG G F V + ++ TG A K +K+R S ED REV L
Sbjct: 11 DYYDTGEELGSGVFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIE--REVSIL 68
Query: 55 RKLNHSNIVKLKELIQNNNRLYLVFECMEC-NLYQLMAARDRKLFSEPEIKAWLFQVFQG 113
+++ H N++ L E+ +N + L+ E + L+ +A ++ +E E +L Q+ G
Sbjct: 69 KEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES--LTEEEATEFLKQILNG 126
Query: 114 LSYMHQNGFFHRDLKPENLL-----VSQGIIKIADFGLAREIKSGPPYTNYVGSRWYRAP 168
+ Y+H H DLKPEN++ V + IKI DFGLA +I G + N G+ + AP
Sbjct: 127 VYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAP 186
Query: 169 EILLQSELYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGL 228
EI + E +ADMW++G I L + F G D+ + L
Sbjct: 187 EI-VNYEPLGLEADMWSIGVITYILLSGASPFLG-------------------DTKQETL 226
Query: 229 RQARAIKYQFPQLPRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFFK 285
A+ Y+F +N SAL A L DP KR T ++LQHP+ K
Sbjct: 227 ANVSAVNYEFEDEYFSNTSAL-------AKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 119 bits (299), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 92/297 (30%), Positives = 137/297 (46%), Gaps = 44/297 (14%)
Query: 2 DKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYA-------SWEDCLNLREVKCL 54
D Y +ELG G F V + ++ TG A K +K+R S ED REV L
Sbjct: 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIE--REVSIL 68
Query: 55 RKLNHSNIVKLKELIQNNNRLYLVFECMEC-NLYQLMAARDRKLFSEPEIKAWLFQVFQG 113
+++ H N++ L E+ +N + L+ E + L+ +A ++ +E E +L Q+ G
Sbjct: 69 KEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES--LTEEEATEFLKQILNG 126
Query: 114 LSYMHQNGFFHRDLKPENLL-----VSQGIIKIADFGLAREIKSGPPYTNYVGSRWYRAP 168
+ Y+H H DLKPEN++ V + IKI DFGLA +I G + N G+ + AP
Sbjct: 127 VYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAP 186
Query: 169 EILLQSELYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGL 228
EI + E +ADMW++G I L + F G D+ + L
Sbjct: 187 EI-VNYEPLGLEADMWSIGVITYILLSGASPFLG-------------------DTKQETL 226
Query: 229 RQARAIKYQFPQLPRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFFK 285
A+ Y+F +N SAL A L DP KR T ++LQHP+ K
Sbjct: 227 ANVSAVNYEFEDEYFSNTSAL-------AKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 119 bits (299), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 92/297 (30%), Positives = 137/297 (46%), Gaps = 44/297 (14%)
Query: 2 DKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRY-------ASWEDCLNLREVKCL 54
D Y +ELG G F V + ++ TG A K +K+R S ED REV L
Sbjct: 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIE--REVSIL 68
Query: 55 RKLNHSNIVKLKELIQNNNRLYLVFECMEC-NLYQLMAARDRKLFSEPEIKAWLFQVFQG 113
+++ H N++ L E+ +N + L+ E + L+ +A ++ +E E +L Q+ G
Sbjct: 69 KEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES--LTEEEATEFLKQILNG 126
Query: 114 LSYMHQNGFFHRDLKPENLL-----VSQGIIKIADFGLAREIKSGPPYTNYVGSRWYRAP 168
+ Y+H H DLKPEN++ V + IKI DFGLA +I G + N G+ + AP
Sbjct: 127 VYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAP 186
Query: 169 EILLQSELYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGL 228
EI + E +ADMW++G I L + F G D+ + L
Sbjct: 187 EI-VNYEPLGLEADMWSIGVITYILLSGASPFLG-------------------DTKQETL 226
Query: 229 RQARAIKYQFPQLPRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFFK 285
A+ Y+F +N SAL A L DP KR T ++LQHP+ K
Sbjct: 227 ANVSAVNYEFEDEYFSNTSAL-------AKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 119 bits (299), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 92/297 (30%), Positives = 137/297 (46%), Gaps = 44/297 (14%)
Query: 2 DKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYA-------SWEDCLNLREVKCL 54
D Y +ELG G F V + ++ TG A K +K+R S ED REV L
Sbjct: 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIE--REVSIL 68
Query: 55 RKLNHSNIVKLKELIQNNNRLYLVFECMEC-NLYQLMAARDRKLFSEPEIKAWLFQVFQG 113
+++ H N++ L E+ +N + L+ E + L+ +A ++ +E E +L Q+ G
Sbjct: 69 KEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES--LTEEEATEFLKQILNG 126
Query: 114 LSYMHQNGFFHRDLKPENLL-----VSQGIIKIADFGLAREIKSGPPYTNYVGSRWYRAP 168
+ Y+H H DLKPEN++ V + IKI DFGLA +I G + N G+ + AP
Sbjct: 127 VYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAP 186
Query: 169 EILLQSELYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGL 228
EI + E +ADMW++G I L + F G D+ + L
Sbjct: 187 EI-VNYEPLGLEADMWSIGVITYILLSGASPFLG-------------------DTKQETL 226
Query: 229 RQARAIKYQFPQLPRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFFK 285
A+ Y+F +N SAL A L DP KR T ++LQHP+ K
Sbjct: 227 ANVSAVNYEFEDEYFSNTSAL-------AKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 119 bits (299), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 92/297 (30%), Positives = 137/297 (46%), Gaps = 44/297 (14%)
Query: 2 DKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRY-------ASWEDCLNLREVKCL 54
D Y +ELG G F V + ++ TG A K +K+R S ED REV L
Sbjct: 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIE--REVSIL 68
Query: 55 RKLNHSNIVKLKELIQNNNRLYLVFECMEC-NLYQLMAARDRKLFSEPEIKAWLFQVFQG 113
+++ H N++ L E+ +N + L+ E + L+ +A ++ +E E +L Q+ G
Sbjct: 69 KEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES--LTEEEATEFLKQILNG 126
Query: 114 LSYMHQNGFFHRDLKPENLL-----VSQGIIKIADFGLAREIKSGPPYTNYVGSRWYRAP 168
+ Y+H H DLKPEN++ V + IKI DFGLA +I G + N G+ + AP
Sbjct: 127 VYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPAFVAP 186
Query: 169 EILLQSELYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGL 228
EI + E +ADMW++G I L + F G D+ + L
Sbjct: 187 EI-VNYEPLGLEADMWSIGVITYILLSGASPFLG-------------------DTKQETL 226
Query: 229 RQARAIKYQFPQLPRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFFK 285
A+ Y+F +N SAL A L DP KR T ++LQHP+ K
Sbjct: 227 ANVSAVNYEFEDEYFSNTSAL-------AKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 119 bits (298), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 92/297 (30%), Positives = 137/297 (46%), Gaps = 44/297 (14%)
Query: 2 DKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRY-------ASWEDCLNLREVKCL 54
D Y +ELG G F V + ++ TG A K +K+R S ED REV L
Sbjct: 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIE--REVSIL 68
Query: 55 RKLNHSNIVKLKELIQNNNRLYLVFECMEC-NLYQLMAARDRKLFSEPEIKAWLFQVFQG 113
+++ H N++ L E+ +N + L+ E + L+ +A ++ +E E +L Q+ G
Sbjct: 69 KEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES--LTEEEATEFLKQILNG 126
Query: 114 LSYMHQNGFFHRDLKPENLL-----VSQGIIKIADFGLAREIKSGPPYTNYVGSRWYRAP 168
+ Y+H H DLKPEN++ V + IKI DFGLA +I G + N G+ + AP
Sbjct: 127 VYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAP 186
Query: 169 EILLQSELYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGL 228
EI + E +ADMW++G I L + F G D+ + L
Sbjct: 187 EI-VNYEPLGLEADMWSIGVITYILLSGASPFLG-------------------DTKQETL 226
Query: 229 RQARAIKYQFPQLPRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFFK 285
A+ Y+F +N SAL A L DP KR T ++LQHP+ K
Sbjct: 227 ANVSAVNYEFEDEYFSNTSAL-------AKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 119 bits (298), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 92/297 (30%), Positives = 137/297 (46%), Gaps = 44/297 (14%)
Query: 2 DKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRY-------ASWEDCLNLREVKCL 54
D Y +ELG G F V + ++ TG A K +K+R S ED REV L
Sbjct: 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIE--REVSIL 68
Query: 55 RKLNHSNIVKLKELIQNNNRLYLVFECMEC-NLYQLMAARDRKLFSEPEIKAWLFQVFQG 113
+++ H N++ L E+ +N + L+ E + L+ +A ++ +E E +L Q+ G
Sbjct: 69 KEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES--LTEEEATEFLKQILNG 126
Query: 114 LSYMHQNGFFHRDLKPENLL-----VSQGIIKIADFGLAREIKSGPPYTNYVGSRWYRAP 168
+ Y+H H DLKPEN++ V + IKI DFGLA +I G + N G+ + AP
Sbjct: 127 VYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAP 186
Query: 169 EILLQSELYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGL 228
EI + E +ADMW++G I L + F G D+ + L
Sbjct: 187 EI-VNYEPLGLEADMWSIGVITYILLSGASPFLG-------------------DTKQETL 226
Query: 229 RQARAIKYQFPQLPRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFFK 285
A+ Y+F +N SAL A L DP KR T ++LQHP+ K
Sbjct: 227 ANVSAVNYEFEDEYFSNTSAL-------AKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 119 bits (298), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 92/297 (30%), Positives = 137/297 (46%), Gaps = 44/297 (14%)
Query: 2 DKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRY-------ASWEDCLNLREVKCL 54
D Y +ELG G F V + ++ TG A K +K+R S ED REV L
Sbjct: 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIE--REVSIL 68
Query: 55 RKLNHSNIVKLKELIQNNNRLYLVFECMEC-NLYQLMAARDRKLFSEPEIKAWLFQVFQG 113
+++ H N++ L E+ +N + L+ E + L+ +A ++ +E E +L Q+ G
Sbjct: 69 KEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES--LTEEEATEFLKQILNG 126
Query: 114 LSYMHQNGFFHRDLKPENLL-----VSQGIIKIADFGLAREIKSGPPYTNYVGSRWYRAP 168
+ Y+H H DLKPEN++ V + IKI DFGLA +I G + N G+ + AP
Sbjct: 127 VYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAP 186
Query: 169 EILLQSELYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGL 228
EI + E +ADMW++G I L + F G D+ + L
Sbjct: 187 EI-VNYEPLGLEADMWSIGVITYILLSGASPFLG-------------------DTKQETL 226
Query: 229 RQARAIKYQFPQLPRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFFK 285
A+ Y+F +N SAL A L DP KR T ++LQHP+ K
Sbjct: 227 ANVSAVNYEFEDEYFSNTSAL-------AKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 119 bits (298), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 92/297 (30%), Positives = 137/297 (46%), Gaps = 44/297 (14%)
Query: 2 DKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYA-------SWEDCLNLREVKCL 54
D Y +ELG G F V + ++ TG A K +K+R S ED REV L
Sbjct: 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIE--REVSIL 68
Query: 55 RKLNHSNIVKLKELIQNNNRLYLVFECMEC-NLYQLMAARDRKLFSEPEIKAWLFQVFQG 113
+++ H N++ L E+ +N + L+ E + L+ +A ++ +E E +L Q+ G
Sbjct: 69 KEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES--LTEEEATEFLKQILNG 126
Query: 114 LSYMHQNGFFHRDLKPENLL-----VSQGIIKIADFGLAREIKSGPPYTNYVGSRWYRAP 168
+ Y+H H DLKPEN++ V + IKI DFGLA +I G + N G+ + AP
Sbjct: 127 VYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAP 186
Query: 169 EILLQSELYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGL 228
EI + E +ADMW++G I L + F G D+ + L
Sbjct: 187 EI-VNYEPLGLEADMWSIGVITYILLSGASPFLG-------------------DTKQETL 226
Query: 229 RQARAIKYQFPQLPRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFFK 285
A+ Y+F +N SAL A L DP KR T ++LQHP+ K
Sbjct: 227 ANVSAVNYEFEDEYFSNTSAL-------AKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 119 bits (298), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 92/297 (30%), Positives = 137/297 (46%), Gaps = 44/297 (14%)
Query: 2 DKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYA-------SWEDCLNLREVKCL 54
D Y +ELG G F V + ++ TG A K +K+R S ED REV L
Sbjct: 10 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIE--REVSIL 67
Query: 55 RKLNHSNIVKLKELIQNNNRLYLVFECMEC-NLYQLMAARDRKLFSEPEIKAWLFQVFQG 113
+++ H N++ L E+ +N + L+ E + L+ +A ++ +E E +L Q+ G
Sbjct: 68 KEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES--LTEEEATEFLKQILNG 125
Query: 114 LSYMHQNGFFHRDLKPENLL-----VSQGIIKIADFGLAREIKSGPPYTNYVGSRWYRAP 168
+ Y+H H DLKPEN++ V + IKI DFGLA +I G + N G+ + AP
Sbjct: 126 VYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAP 185
Query: 169 EILLQSELYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGL 228
EI + E +ADMW++G I L + F G D+ + L
Sbjct: 186 EI-VNYEPLGLEADMWSIGVITYILLSGASPFLG-------------------DTKQETL 225
Query: 229 RQARAIKYQFPQLPRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFFK 285
A+ Y+F +N SAL A L DP KR T ++LQHP+ K
Sbjct: 226 ANVSAVNYEFEDEYFSNTSAL-------AKDFIRRLLVKDPKKRMTIQDSLQHPWIK 275
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 119 bits (298), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 92/297 (30%), Positives = 137/297 (46%), Gaps = 44/297 (14%)
Query: 2 DKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYA-------SWEDCLNLREVKCL 54
D Y +ELG G F V + ++ TG A K +K+R S ED REV L
Sbjct: 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIE--REVSIL 68
Query: 55 RKLNHSNIVKLKELIQNNNRLYLVFECMEC-NLYQLMAARDRKLFSEPEIKAWLFQVFQG 113
+++ H N++ L E+ +N + L+ E + L+ +A ++ +E E +L Q+ G
Sbjct: 69 KEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES--LTEEEATEFLKQILNG 126
Query: 114 LSYMHQNGFFHRDLKPENLL-----VSQGIIKIADFGLAREIKSGPPYTNYVGSRWYRAP 168
+ Y+H H DLKPEN++ V + IKI DFGLA +I G + N G+ + AP
Sbjct: 127 VYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAP 186
Query: 169 EILLQSELYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGL 228
EI + E +ADMW++G I L + F G D+ + L
Sbjct: 187 EI-VNYEPLGLEADMWSIGVITYILLSGASPFLG-------------------DTKQETL 226
Query: 229 RQARAIKYQFPQLPRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFFK 285
A+ Y+F +N SAL A L DP KR T ++LQHP+ K
Sbjct: 227 ANVSAVNYEFEDEYFSNTSAL-------AKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 119 bits (297), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 92/297 (30%), Positives = 137/297 (46%), Gaps = 44/297 (14%)
Query: 2 DKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYA-------SWEDCLNLREVKCL 54
D Y +ELG G F V + ++ TG A K +K+R S ED REV L
Sbjct: 11 DYYDTGEELGSGKFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIE--REVSIL 68
Query: 55 RKLNHSNIVKLKELIQNNNRLYLVFECMEC-NLYQLMAARDRKLFSEPEIKAWLFQVFQG 113
+++ H N++ L E+ +N + L+ E + L+ +A ++ +E E +L Q+ G
Sbjct: 69 KEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES--LTEEEATEFLKQILNG 126
Query: 114 LSYMHQNGFFHRDLKPENLL-----VSQGIIKIADFGLAREIKSGPPYTNYVGSRWYRAP 168
+ Y+H H DLKPEN++ V + IKI DFGLA +I G + N G+ + AP
Sbjct: 127 VYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAP 186
Query: 169 EILLQSELYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGL 228
EI + E +ADMW++G I L + F G D+ + L
Sbjct: 187 EI-VNYEPLGLEADMWSIGVITYILLSGASPFLG-------------------DTKQETL 226
Query: 229 RQARAIKYQFPQLPRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFFK 285
A+ Y+F +N SAL A L DP KR T ++LQHP+ K
Sbjct: 227 ANVSAVNYEFEDEYFSNTSAL-------AKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 119 bits (297), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 87/289 (30%), Positives = 144/289 (49%), Gaps = 36/289 (12%)
Query: 2 DKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLNL-REVKCLRKLNHS 60
D Y F+ELG+GAF V + + + A K + + S D L RE + R L H
Sbjct: 31 DDYQLFEELGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSARDHQKLEREARICRLLKHP 90
Query: 61 NIVKLKELIQNNNRLYLVFECMECN-LYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQ 119
NIV+L + I YLVF+ + L++ + AR+ +SE + + Q+ + ++++HQ
Sbjct: 91 NIVRLHDSISEEGFHYLVFDLVTGGELFEDIVARE--YYSEADASHCIHQILESVNHIHQ 148
Query: 120 NGFFHRDLKPENLLVSQ----GIIKIADFGLAREIKS-GPPYTNYVGSRWYRAPEILLQS 174
+ HRDLKPENLL++ +K+ADFGLA E++ + + G+ Y +PE+ L+
Sbjct: 149 HDIVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGEQQAWFGFAGTPGYLSPEV-LRK 207
Query: 175 ELYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQARAI 234
+ Y D+WA G I+ L P F + ++Y+ Q +A
Sbjct: 208 DPYGKPVDIWACGVILYILLVGYPPF-WDEDQHKLYQ------------------QIKAG 248
Query: 235 KYQFPQLPRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPF 283
Y FP S + + +A +L + + +P+KR TA +AL+HP+
Sbjct: 249 AYDFP-------SPEWDTVTPEAKNLINQMLTINPAKRITADQALKHPW 290
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 119 bits (297), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 92/297 (30%), Positives = 137/297 (46%), Gaps = 44/297 (14%)
Query: 2 DKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYA-------SWEDCLNLREVKCL 54
D Y +ELG G F V + ++ TG A K +K+R S ED REV L
Sbjct: 10 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIE--REVSIL 67
Query: 55 RKLNHSNIVKLKELIQNNNRLYLVFECMEC-NLYQLMAARDRKLFSEPEIKAWLFQVFQG 113
+++ H N++ L E+ +N + L+ E + L+ +A ++ +E E +L Q+ G
Sbjct: 68 KEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES--LTEEEATEFLKQILNG 125
Query: 114 LSYMHQNGFFHRDLKPENLL-----VSQGIIKIADFGLAREIKSGPPYTNYVGSRWYRAP 168
+ Y+H H DLKPEN++ V + IKI DFGLA +I G + N G+ + AP
Sbjct: 126 VYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAP 185
Query: 169 EILLQSELYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGL 228
EI + E +ADMW++G I L + F G D+ + L
Sbjct: 186 EI-VNYEPLGLEADMWSIGVITYILLSGASPFLG-------------------DTKQETL 225
Query: 229 RQARAIKYQFPQLPRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFFK 285
A+ Y+F +N SAL A L DP KR T ++LQHP+ K
Sbjct: 226 ANVSAVNYEFEDEYFSNTSAL-------AKDFIRRLLVKDPKKRMTIQDSLQHPWIK 275
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 118 bits (296), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 88/290 (30%), Positives = 143/290 (49%), Gaps = 36/290 (12%)
Query: 2 DKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLNL-REVKCLRKLNHS 60
++Y F+ELG+GAF V + G+ A + + S D L RE + R L H
Sbjct: 11 EEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHP 70
Query: 61 NIVKLKELIQNNNRLYLVFECMECN-LYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQ 119
NIV+L + I YL+F+ + L++ + AR+ +SE + + Q+ + + + HQ
Sbjct: 71 NIVRLHDSISEEGHHYLIFDLVTGGELFEDIVARE--YYSEADASHCIQQILEAVLHCHQ 128
Query: 120 NGFFHRDLKPENLLVSQGI----IKIADFGLAREIKS-GPPYTNYVGSRWYRAPEILLQS 174
G HR+LKPENLL++ + +K+ADFGLA E++ + + G+ Y +PE+ L+
Sbjct: 129 MGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTPGYLSPEV-LRK 187
Query: 175 ELYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQARAI 234
+ Y D+WA G I+ L P F + ++Y+ Q +A
Sbjct: 188 DPYGKPVDLWACGVILYILLVGYPPF-WDEDQHRLYQ------------------QIKAG 228
Query: 235 KYQFPQLPRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFF 284
Y FP S + + +A L + + +PSKR TAAEAL+HP+
Sbjct: 229 AYDFP-------SPEWDTVTPEAKDLINKMLTINPSKRITAAEALKHPWI 271
>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
pdb|3JUH|B Chain B, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
Length = 335
Score = 118 bits (296), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 83/303 (27%), Positives = 149/303 (49%), Gaps = 35/303 (11%)
Query: 2 DKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLNLREVKCLRKLNHSN 61
D Y ++LGRG + VF+A + E VA+K LK + ++ ++ LR N
Sbjct: 37 DDYQLVRKLGRGKYSEVFEAINITNNEKVAVKILKPVKKK-KIKREIKILENLR--GGPN 93
Query: 62 IVKLKELIQN--NNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQ 119
I+ L +++++ + LVFE + ++ + + ++ +I+ +++++ + L Y H
Sbjct: 94 IITLADIVKDPVSRTPALVFEHVNNTDFKQLY----QTLTDYDIRFYMYEILKALDYCHS 149
Query: 120 NGFFHRDLKPENLLVSQGI--IKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQSELY 177
G HRD+KP N+L+ +++ D+GLA G Y V SR+++ PE+L+ ++Y
Sbjct: 150 MGIMHRDVKPHNVLIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMY 209
Query: 178 SSKADMWAMGAIMAE-LFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQARAIKY 236
DMW++G ++A +F P F G DQ+ +I VLG+ + + D KY
Sbjct: 210 DYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYID--------KY 261
Query: 237 QFPQLPRAN----------LSALMPSASQ-----DAISLFESLCSWDPSKRPTAAEALQH 281
PR N + S +Q +A+ + L +D R TA EA++H
Sbjct: 262 NIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEH 321
Query: 282 PFF 284
P+F
Sbjct: 322 PYF 324
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 118 bits (296), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 94/298 (31%), Positives = 140/298 (46%), Gaps = 42/298 (14%)
Query: 2 DKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASW------EDCLNLR-EVKCL 54
D+Y K LG GA G V AF+ T + VAIK + +R + + LN+ E++ L
Sbjct: 16 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEIL 75
Query: 55 RKLNHSNIVKLKELIQNNNRLYLVFECMECN-LYQLMAARDRKLFSEPEIKAWLFQVFQG 113
+KLNH I+K+K + Y+V E ME L+ + R E K + +Q+
Sbjct: 76 KKLNHPCIIKIKNFFDAED-YYIVLELMEGGELFDKVVGNKR--LKEATCKLYFYQMLLA 132
Query: 114 LSYMHQNGFFHRDLKPENLLVSQG----IIKIADFGLAREIKSGPPYTNYVGSRWYRAPE 169
+ Y+H+NG HRDLKPEN+L+S +IKI DFG ++ + G+ Y APE
Sbjct: 133 VQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPE 192
Query: 170 ILLQ--SELYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADG 227
+L+ + Y+ D W++G I LF +P SE T S D
Sbjct: 193 VLVSVGTAGYNRAVDCWSLGVI---LFICLSGYPPFSE------------HRTQVSLKD- 236
Query: 228 LRQARAIKYQFPQLPRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFFK 285
Q + KY F + + S+ A+ L + L DP R T EAL+HP+ +
Sbjct: 237 --QITSGKYNF-------IPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQ 285
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 118 bits (296), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 94/298 (31%), Positives = 140/298 (46%), Gaps = 42/298 (14%)
Query: 2 DKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASW------EDCLNLR-EVKCL 54
D+Y K LG GA G V AF+ T + VAIK + +R + + LN+ E++ L
Sbjct: 10 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEIL 69
Query: 55 RKLNHSNIVKLKELIQNNNRLYLVFECMEC-NLYQLMAARDRKLFSEPEIKAWLFQVFQG 113
+KLNH I+K+K + Y+V E ME L+ + R E K + +Q+
Sbjct: 70 KKLNHPCIIKIKNFFDAED-YYIVLELMEGGELFDKVVGNKR--LKEATCKLYFYQMLLA 126
Query: 114 LSYMHQNGFFHRDLKPENLLVSQG----IIKIADFGLAREIKSGPPYTNYVGSRWYRAPE 169
+ Y+H+NG HRDLKPEN+L+S +IKI DFG ++ + G+ Y APE
Sbjct: 127 VQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPE 186
Query: 170 ILLQ--SELYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADG 227
+L+ + Y+ D W++G I LF +P SE T S D
Sbjct: 187 VLVSVGTAGYNRAVDCWSLGVI---LFICLSGYPPFSE------------HRTQVSLKD- 230
Query: 228 LRQARAIKYQFPQLPRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFFK 285
Q + KY F + + S+ A+ L + L DP R T EAL+HP+ +
Sbjct: 231 --QITSGKYNF-------IPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQ 279
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 118 bits (296), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 95/298 (31%), Positives = 142/298 (47%), Gaps = 42/298 (14%)
Query: 2 DKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKEL-KQRYA-----SWEDCLNLR-EVKCL 54
D+Y K LG GA G V AF+ T + VAIK + K+++A + LN+ E++ L
Sbjct: 10 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEIL 69
Query: 55 RKLNHSNIVKLKELIQNNNRLYLVFECMEC-NLYQLMAARDRKLFSEPEIKAWLFQVFQG 113
+KLNH I+K+K + Y+V E ME L+ + R E K + +Q+
Sbjct: 70 KKLNHPCIIKIKNFFDAED-YYIVLELMEGGELFDKVVGNKR--LKEATCKLYFYQMLLA 126
Query: 114 LSYMHQNGFFHRDLKPENLLVSQG----IIKIADFGLAREIKSGPPYTNYVGSRWYRAPE 169
+ Y+H+NG HRDLKPEN+L+S +IKI DFG ++ + G+ Y APE
Sbjct: 127 VQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPE 186
Query: 170 ILLQ--SELYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADG 227
+L+ + Y+ D W++G I LF +P SE T S D
Sbjct: 187 VLVSVGTAGYNRAVDCWSLGVI---LFICLSGYPPFSE------------HRTQVSLKD- 230
Query: 228 LRQARAIKYQFPQLPRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFFK 285
Q + KY F + + S+ A+ L + L DP R T EAL+HP+ +
Sbjct: 231 --QITSGKYNF-------IPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQ 279
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 118 bits (296), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 94/298 (31%), Positives = 140/298 (46%), Gaps = 42/298 (14%)
Query: 2 DKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASW------EDCLNLR-EVKCL 54
D+Y K LG GA G V AF+ T + VAIK + +R + + LN+ E++ L
Sbjct: 9 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEIL 68
Query: 55 RKLNHSNIVKLKELIQNNNRLYLVFECMEC-NLYQLMAARDRKLFSEPEIKAWLFQVFQG 113
+KLNH I+K+K + Y+V E ME L+ + R E K + +Q+
Sbjct: 69 KKLNHPCIIKIKNFFDAED-YYIVLELMEGGELFDKVVGNKR--LKEATCKLYFYQMLLA 125
Query: 114 LSYMHQNGFFHRDLKPENLLVSQG----IIKIADFGLAREIKSGPPYTNYVGSRWYRAPE 169
+ Y+H+NG HRDLKPEN+L+S +IKI DFG ++ + G+ Y APE
Sbjct: 126 VQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPE 185
Query: 170 ILLQ--SELYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADG 227
+L+ + Y+ D W++G I LF +P SE T S D
Sbjct: 186 VLVSVGTAGYNRAVDCWSLGVI---LFICLSGYPPFSE------------HRTQVSLKD- 229
Query: 228 LRQARAIKYQFPQLPRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFFK 285
Q + KY F + + S+ A+ L + L DP R T EAL+HP+ +
Sbjct: 230 --QITSGKYNF-------IPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQ 278
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 118 bits (296), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 94/298 (31%), Positives = 140/298 (46%), Gaps = 42/298 (14%)
Query: 2 DKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASW------EDCLNLR-EVKCL 54
D+Y K LG GA G V AF+ T + VAIK + +R + + LN+ E++ L
Sbjct: 10 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEIL 69
Query: 55 RKLNHSNIVKLKELIQNNNRLYLVFECMEC-NLYQLMAARDRKLFSEPEIKAWLFQVFQG 113
+KLNH I+K+K + Y+V E ME L+ + R E K + +Q+
Sbjct: 70 KKLNHPCIIKIKNFFDAED-YYIVLELMEGGELFDKVVGNKR--LKEATCKLYFYQMLLA 126
Query: 114 LSYMHQNGFFHRDLKPENLLVSQG----IIKIADFGLAREIKSGPPYTNYVGSRWYRAPE 169
+ Y+H+NG HRDLKPEN+L+S +IKI DFG ++ + G+ Y APE
Sbjct: 127 VQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPE 186
Query: 170 ILLQ--SELYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADG 227
+L+ + Y+ D W++G I LF +P SE T S D
Sbjct: 187 VLVSVGTAGYNRAVDCWSLGVI---LFICLSGYPPFSE------------HRTQVSLKD- 230
Query: 228 LRQARAIKYQFPQLPRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFFK 285
Q + KY F + + S+ A+ L + L DP R T EAL+HP+ +
Sbjct: 231 --QITSGKYNF-------IPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQ 279
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 118 bits (296), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 84/287 (29%), Positives = 134/287 (46%), Gaps = 36/287 (12%)
Query: 8 KELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLNLREVKCLRKLNHSNIVKLKE 67
++LG GAFG V + +G IK + + + E++ L+ L+H NI+K+ E
Sbjct: 28 RKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFE 87
Query: 68 LIQNNNRLYLVFECMECN--LYQLMAARDR-KLFSEPEIKAWLFQVFQGLSYMHQNGFFH 124
+ ++ + +Y+V E E L ++++A+ R K SE + + Q+ L+Y H H
Sbjct: 88 VFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQHVVH 147
Query: 125 RDLKPENLLVS----QGIIKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQSELYSSK 180
+DLKPEN+L IKI DFGLA KS TN G+ Y APE+ + + K
Sbjct: 148 KDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEHSTNAAGTALYMAPEVFKRDVTF--K 205
Query: 181 ADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQARAIKYQFPQ 240
D+W+ G +M L T C F G S + K Y+ P
Sbjct: 206 CDIWSAGVVMYFLLTGCLPFTGTSLEEVQQKAT----------------------YKEP- 242
Query: 241 LPRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFFKRC 287
N + + A+ L + + + DP +RP+AA+ L H +FK+
Sbjct: 243 ----NYAVECRPLTPQAVDLLKQMLTKDPERRPSAAQVLHHEWFKQA 285
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 117 bits (294), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 92/297 (30%), Positives = 137/297 (46%), Gaps = 44/297 (14%)
Query: 2 DKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYA-------SWEDCLNLREVKCL 54
D Y +ELG G F V + ++ TG A K +K+R S ED REV L
Sbjct: 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIE--REVSIL 68
Query: 55 RKLNHSNIVKLKELIQNNNRLYLVFECMEC-NLYQLMAARDRKLFSEPEIKAWLFQVFQG 113
+++ H N++ L E+ +N + L+ E + L+ +A ++ +E E +L Q+ G
Sbjct: 69 KEIQHPNVITLHEVYENKTDVILIGELVAGGELFDFLAEKES--LTEEEATEFLKQILNG 126
Query: 114 LSYMHQNGFFHRDLKPENLL-----VSQGIIKIADFGLAREIKSGPPYTNYVGSRWYRAP 168
+ Y+H H DLKPEN++ V + IKI DFGLA +I G + N G+ + AP
Sbjct: 127 VYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAP 186
Query: 169 EILLQSELYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGL 228
EI + E +ADMW++G I L + F G D+ + L
Sbjct: 187 EI-VNYEPLGLEADMWSIGVITYILLSGASPFLG-------------------DTKQETL 226
Query: 229 RQARAIKYQFPQLPRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFFK 285
A+ Y+F +N SAL A L DP KR T ++LQHP+ K
Sbjct: 227 ANVSAVNYEFEDEYFSNTSAL-------AKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|2PVH|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVJ|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVK|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVL|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVM|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVN|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|3BE9|A Chain A, Structure-Based Design And Synthesis Of Novel Macrocyclic
Pyrazolo[1,5-A] [1,3,5]triazine Compounds As Potent
Inhibitors Of Protein Kinase Ck2 And Their Anticancer
Activities
Length = 352
Score = 116 bits (291), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 85/302 (28%), Positives = 154/302 (50%), Gaps = 27/302 (8%)
Query: 2 DKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLNLREVKCLRKLNHS- 60
D Y +++GRG + VF+ + + E IK LK RE+K L+ L
Sbjct: 52 DDYEVVRKVGRGKYSEVFEGINVNNNEKCIIKILKPVKKK----KIKREIKILQNLXGGP 107
Query: 61 NIVKLKELI--QNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMH 118
NIVKL +++ Q++ L+FE + ++++ ++ +I+ +++++ + L Y H
Sbjct: 108 NIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLYP----TLTDYDIRYYIYELLKALDYCH 163
Query: 119 QNGFFHRDLKPENLLVSQGI--IKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQSEL 176
G HRD+KP N+++ + +++ D+GLA G Y V SR+++ PE+L+ +
Sbjct: 164 SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQD 223
Query: 177 YSSKADMWAMGAIMAE-LFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLR-----Q 230
Y DMW++G + A +F P F G DQ+ KI VLG+ ++++ + R Q
Sbjct: 224 YDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNAYLNKYRIELDPQ 283
Query: 231 ARAIKYQFPQLP-----RANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFFK 285
A+ + + P A+ L+ S +AI + L +D +R TA EA+ HP+F+
Sbjct: 284 LEALVGRHSRKPWLKFMNADNQHLV---SPEAIDFLDKLLRYDHQERLTALEAMTHPYFQ 340
Query: 286 RC 287
+
Sbjct: 341 QV 342
>pdb|4DGL|C Chain C, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
pdb|4DGL|D Chain D, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
Length = 335
Score = 116 bits (290), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 82/303 (27%), Positives = 149/303 (49%), Gaps = 35/303 (11%)
Query: 2 DKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLNLREVKCLRKLNHSN 61
D Y ++LGRG + VF+A + E V +K LK + ++ ++ LR N
Sbjct: 37 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKK-KIKREIKILENLR--GGPN 93
Query: 62 IVKLKELIQN--NNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQ 119
I+ L +++++ + LVFE + ++ + R+ ++ +I+ +++++ + L Y H
Sbjct: 94 IITLADIVKDPVSRTPALVFEHVNNTDFKQL----RQTLTDYDIRFYMYEILKALDYCHS 149
Query: 120 NGFFHRDLKPENLLVSQGI--IKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQSELY 177
G HRD+KP N+++ +++ D+GLA G Y V SR+++ PE+L+ ++Y
Sbjct: 150 MGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMY 209
Query: 178 SSKADMWAMGAIMAE-LFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQARAIKY 236
DMW++G ++A +F P F G DQ+ +I VLG+ + + D KY
Sbjct: 210 DYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYID--------KY 261
Query: 237 QFPQLPRAN----------LSALMPSASQ-----DAISLFESLCSWDPSKRPTAAEALQH 281
PR N + S +Q +A+ + L +D R TA EA++H
Sbjct: 262 NIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEH 321
Query: 282 PFF 284
P+F
Sbjct: 322 PYF 324
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 115 bits (289), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 93/298 (31%), Positives = 140/298 (46%), Gaps = 42/298 (14%)
Query: 2 DKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASW------EDCLNLR-EVKCL 54
D+Y K LG GA G V AF+ T + VAI+ + +R + + LN+ E++ L
Sbjct: 149 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEIL 208
Query: 55 RKLNHSNIVKLKELIQNNNRLYLVFECMEC-NLYQLMAARDRKLFSEPEIKAWLFQVFQG 113
+KLNH I+K+K + Y+V E ME L+ + R E K + +Q+
Sbjct: 209 KKLNHPCIIKIKNFFDAED-YYIVLELMEGGELFDKVVGNKR--LKEATCKLYFYQMLLA 265
Query: 114 LSYMHQNGFFHRDLKPENLLVS----QGIIKIADFGLAREIKSGPPYTNYVGSRWYRAPE 169
+ Y+H+NG HRDLKPEN+L+S +IKI DFG ++ + G+ Y APE
Sbjct: 266 VQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPE 325
Query: 170 ILLQ--SELYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADG 227
+L+ + Y+ D W++G I LF +P SE T S D
Sbjct: 326 VLVSVGTAGYNRAVDCWSLGVI---LFICLSGYPPFSE------------HRTQVSLKD- 369
Query: 228 LRQARAIKYQFPQLPRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFFK 285
Q + KY F + + S+ A+ L + L DP R T EAL+HP+ +
Sbjct: 370 --QITSGKYNF-------IPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQ 418
>pdb|4DGN|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Luteolin
Length = 326
Score = 115 bits (289), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 85/302 (28%), Positives = 153/302 (50%), Gaps = 27/302 (8%)
Query: 2 DKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLNLREVKCLRKLNHS- 60
D Y +++GRG + VF+ + + E IK LK RE+K L+ L
Sbjct: 31 DDYEVVRKVGRGKYSEVFEGINVNNNEKCIIKILKPVKKK----KIKREIKILQNLXGGP 86
Query: 61 NIVKLKELI--QNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMH 118
NIVKL +++ Q++ L+FE + ++++ ++ +I+ +++++ + L Y H
Sbjct: 87 NIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLYPT----LTDYDIRYYIYELLKALDYCH 142
Query: 119 QNGFFHRDLKPENLLVSQGI--IKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQSEL 176
G HRD+KP N+++ + +++ D+GLA G Y V SR+++ PE+L+ +
Sbjct: 143 SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQD 202
Query: 177 YSSKADMWAMGAIMAE-LFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLR-----Q 230
Y DMW++G + A +F P F G DQ+ KI VLG+ ++ + + R Q
Sbjct: 203 YDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKYRIELDPQ 262
Query: 231 ARAIKYQFPQLP-----RANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFFK 285
A+ + + P A+ L+ S +AI + L +D +R TA EA+ HP+F+
Sbjct: 263 LEALVGRHSRKPWLKFMNADNQHLV---SPEAIDFLDKLLRYDHQERLTALEAMTHPYFQ 319
Query: 286 RC 287
+
Sbjct: 320 QV 321
>pdb|3PVG|A Chain A, Crystal Structure Of Z. Mays Ck2 Alpha Subunit In Complex
With The Inhibitor
4,5,6,7-Tetrabromo-1-Carboxymethylbenzimidazole (K68)
Length = 331
Score = 115 bits (288), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 85/302 (28%), Positives = 153/302 (50%), Gaps = 27/302 (8%)
Query: 2 DKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLNLREVKCLRKLNHS- 60
D Y +++GRG + VF+ + + E IK LK RE+K L+ L
Sbjct: 31 DDYEVVRKVGRGKYSEVFEGINVNNNEKCIIKILKPVKKK----KIKREIKILQNLXGGP 86
Query: 61 NIVKLKELI--QNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMH 118
NIVKL +++ Q++ L+FE + ++++ ++ +I+ +++++ + L Y H
Sbjct: 87 NIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLYP----TLTDYDIRYYIYELLKALDYCH 142
Query: 119 QNGFFHRDLKPENLLVSQGI--IKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQSEL 176
G HRD+KP N+++ + +++ D+GLA G Y V SR+++ PE+L+ +
Sbjct: 143 SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQD 202
Query: 177 YSSKADMWAMGAIMAE-LFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLR-----Q 230
Y DMW++G + A +F P F G DQ+ KI VLG+ ++ + + R Q
Sbjct: 203 YDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKYRIELDPQ 262
Query: 231 ARAIKYQFPQLP-----RANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFFK 285
A+ + + P A+ L+ S +AI + L +D +R TA EA+ HP+F+
Sbjct: 263 LEALVGRHSRKPWLKFMNADNQHLV---SPEAIDFLDKLLRYDHQERLTALEAMTHPYFQ 319
Query: 286 RC 287
+
Sbjct: 320 QV 321
>pdb|4DGM|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Apigenin
Length = 326
Score = 115 bits (288), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 80/301 (26%), Positives = 148/301 (49%), Gaps = 25/301 (8%)
Query: 2 DKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLNLREVKCLRKLNHSN 61
D Y +++GRG + VF+ + + E IK LK + + N
Sbjct: 31 DDYEVVRKVGRGKYSEVFEGINVNNNEKCIIKILKPVKKK---KIKREIKILQNLMGGPN 87
Query: 62 IVKLKELI--QNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQ 119
IVKL +++ Q++ L+FE + ++++ ++ +I+ +++++ + L Y H
Sbjct: 88 IVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLYPT----LTDYDIRYYIYELLKALDYCHS 143
Query: 120 NGFFHRDLKPENLLVSQGI--IKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQSELY 177
G HRD+KP N+++ + +++ D+GLA G Y V SR+++ PE+L+ + Y
Sbjct: 144 QGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDY 203
Query: 178 SSKADMWAMGAIMAE-LFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLR-----QA 231
DMW++G + A +F P F G DQ+ KI VLG+ ++ + + R Q
Sbjct: 204 DYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKYRIELDPQL 263
Query: 232 RAIKYQFPQLP-----RANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFFKR 286
A+ + + P A+ L+ S +AI + L +D +R TA EA+ HP+F++
Sbjct: 264 EALVGRHSRKPWLKFMNADNQHLV---SPEAIDFLDKLLRYDHQERLTALEAMTHPYFQQ 320
Query: 287 C 287
Sbjct: 321 V 321
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 115 bits (288), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 93/298 (31%), Positives = 140/298 (46%), Gaps = 42/298 (14%)
Query: 2 DKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASW------EDCLNLR-EVKCL 54
D+Y K LG GA G V AF+ T + VAI+ + +R + + LN+ E++ L
Sbjct: 135 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEIL 194
Query: 55 RKLNHSNIVKLKELIQNNNRLYLVFECMEC-NLYQLMAARDRKLFSEPEIKAWLFQVFQG 113
+KLNH I+K+K + Y+V E ME L+ + R E K + +Q+
Sbjct: 195 KKLNHPCIIKIKNFFDAED-YYIVLELMEGGELFDKVVGNKR--LKEATCKLYFYQMLLA 251
Query: 114 LSYMHQNGFFHRDLKPENLLVS----QGIIKIADFGLAREIKSGPPYTNYVGSRWYRAPE 169
+ Y+H+NG HRDLKPEN+L+S +IKI DFG ++ + G+ Y APE
Sbjct: 252 VQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPE 311
Query: 170 ILLQ--SELYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADG 227
+L+ + Y+ D W++G I LF +P SE T S D
Sbjct: 312 VLVSVGTAGYNRAVDCWSLGVI---LFICLSGYPPFSE------------HRTQVSLKD- 355
Query: 228 LRQARAIKYQFPQLPRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFFK 285
Q + KY F + + S+ A+ L + L DP R T EAL+HP+ +
Sbjct: 356 --QITSGKYNF-------IPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQ 404
>pdb|2QC6|A Chain A, Protein Kinase Ck2 In Complex With Dbc
pdb|3FL5|A Chain A, Protein Kinase Ck2 In Complex With The Inhibitor
Quinalizarin
pdb|3PZH|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With
Emodin At 1.92 A Resolution
Length = 332
Score = 115 bits (288), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 85/302 (28%), Positives = 153/302 (50%), Gaps = 27/302 (8%)
Query: 2 DKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLNLREVKCLRKLNHS- 60
D Y +++GRG + VF+ + + E IK LK RE+K L+ L
Sbjct: 32 DDYEVVRKVGRGKYSEVFEGINVNNNEKCIIKILKPVKKK----KIKREIKILQNLXGGP 87
Query: 61 NIVKLKELI--QNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMH 118
NIVKL +++ Q++ L+FE + ++++ ++ +I+ +++++ + L Y H
Sbjct: 88 NIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLYP----TLTDYDIRYYIYELLKALDYCH 143
Query: 119 QNGFFHRDLKPENLLVSQGI--IKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQSEL 176
G HRD+KP N+++ + +++ D+GLA G Y V SR+++ PE+L+ +
Sbjct: 144 SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQD 203
Query: 177 YSSKADMWAMGAIMAE-LFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLR-----Q 230
Y DMW++G + A +F P F G DQ+ KI VLG+ ++ + + R Q
Sbjct: 204 YDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKYRIELDPQ 263
Query: 231 ARAIKYQFPQLP-----RANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFFK 285
A+ + + P A+ L+ S +AI + L +D +R TA EA+ HP+F+
Sbjct: 264 LEALVGRHSRKPWLKFMNADNQHLV---SPEAIDFLDKLLRYDHQERLTALEAMTHPYFQ 320
Query: 286 RC 287
+
Sbjct: 321 QV 322
>pdb|3KXG|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
3,4,5,6,7-Pentabromo-1h-Indazole (K64)
pdb|3KXH|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
(2-Dymethylammino-4,5,6,7-Tetrabromobenzoimidazol-1yl-
Acetic Acid (K66)
Length = 327
Score = 115 bits (288), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 85/302 (28%), Positives = 153/302 (50%), Gaps = 27/302 (8%)
Query: 2 DKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLNLREVKCLRKLNHS- 60
D Y +++GRG + VF+ + + E IK LK RE+K L+ L
Sbjct: 31 DDYEVVRKVGRGKYSEVFEGINVNNNEKCIIKILKPVKKK----KIKREIKILQNLXGGP 86
Query: 61 NIVKLKELI--QNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMH 118
NIVKL +++ Q++ L+FE + ++++ ++ +I+ +++++ + L Y H
Sbjct: 87 NIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLYPT----LTDYDIRYYIYELLKALDYCH 142
Query: 119 QNGFFHRDLKPENLLVSQGI--IKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQSEL 176
G HRD+KP N+++ + +++ D+GLA G Y V SR+++ PE+L+ +
Sbjct: 143 SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQD 202
Query: 177 YSSKADMWAMGAIMAE-LFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLR-----Q 230
Y DMW++G + A +F P F G DQ+ KI VLG+ ++ + + R Q
Sbjct: 203 YDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKYRIELDPQ 262
Query: 231 ARAIKYQFPQLP-----RANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFFK 285
A+ + + P A+ L+ S +AI + L +D +R TA EA+ HP+F+
Sbjct: 263 LEALVGRHSRKPWLKFMNADNQHLV---SPEAIDFLDKLLRYDHQERLTALEAMTHPYFQ 319
Query: 286 RC 287
+
Sbjct: 320 QV 321
>pdb|1DS5|A Chain A, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|B Chain B, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|C Chain C, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|D Chain D, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1F0Q|A Chain A, Crystal Structure Of The Alpha Subunit Of Protein Kinase
Ck2 In Complex With The Nucleotide Competitive Inhibitor
Emodin
pdb|1J91|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1J91|B Chain B, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1JAM|A Chain A, Crystal Structure Of Apo-Form Of Z. Mays Ck2 Protein
Kinase Alpha Subunit
pdb|1LP4|A Chain A, Crystal Structure Of A Binary Complex Of The Catalytic
Subunit Of Protein Kinase Ck2 With Mg-Amppnp
pdb|1LPU|A Chain A, Low Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1LR4|A Chain A, Room Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1OM1|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With Iqa
pdb|1ZOE|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|1ZOG|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives
pdb|1ZOH|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|2OXD|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole K17, K22 And K32 Inhibitors
pdb|2OXX|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|B Chain B, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|3PWD|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Nbc (Z1)
Length = 332
Score = 115 bits (288), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 85/302 (28%), Positives = 153/302 (50%), Gaps = 27/302 (8%)
Query: 2 DKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLNLREVKCLRKL-NHS 60
D Y +++GRG + VF+ + + E IK LK RE+K L+ L
Sbjct: 32 DDYEVVRKVGRGKYSEVFEGINVNNNEKCIIKILKPVKKK----KIKREIKILQNLCGGP 87
Query: 61 NIVKLKELI--QNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMH 118
NIVKL +++ Q++ L+FE + ++++ ++ +I+ +++++ + L Y H
Sbjct: 88 NIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLYP----TLTDYDIRYYIYELLKALDYCH 143
Query: 119 QNGFFHRDLKPENLLVSQGI--IKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQSEL 176
G HRD+KP N+++ + +++ D+GLA G Y V SR+++ PE+L+ +
Sbjct: 144 SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQD 203
Query: 177 YSSKADMWAMGAIMAE-LFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLR-----Q 230
Y DMW++G + A +F P F G DQ+ KI VLG+ ++ + + R Q
Sbjct: 204 YDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKYRIELDPQ 263
Query: 231 ARAIKYQFPQLP-----RANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFFK 285
A+ + + P A+ L+ S +AI + L +D +R TA EA+ HP+F+
Sbjct: 264 LEALVGRHSRKPWLKFMNADNQHLV---SPEAIDFLDKLLRYDHQERLTALEAMTHPYFQ 320
Query: 286 RC 287
+
Sbjct: 321 QV 322
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 115 bits (287), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 86/297 (28%), Positives = 140/297 (47%), Gaps = 44/297 (14%)
Query: 2 DKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRY-------ASWEDCLNLREVKCL 54
D Y +ELG G F V + + TG+ A K +K+R S E+ REV L
Sbjct: 5 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIE--REVNIL 62
Query: 55 RKLNHSNIVKLKELIQNNNRLYLVFECMEC-NLYQLMAARDRKLFSEPEIKAWLFQVFQG 113
R++ H NI+ L ++ +N + L+ E + L+ +A ++ +E E +L Q+ G
Sbjct: 63 REIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKES--LTEDEATQFLKQILDG 120
Query: 114 LSYMHQNGFFHRDLKPENL-LVSQGI----IKIADFGLAREIKSGPPYTNYVGSRWYRAP 168
+ Y+H H DLKPEN+ L+ + + IK+ DFG+A +I++G + N G+ + AP
Sbjct: 121 VHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVAP 180
Query: 169 EILLQSELYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGL 228
EI + E +ADMW++G I L + F G ++ + + I
Sbjct: 181 EI-VNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNIS--------------- 224
Query: 229 RQARAIKYQFPQLPRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFFK 285
A+ Y F + +N S L A L DP +R T A++L+H + K
Sbjct: 225 ----AVNYDFDEEYFSNTSEL-------AKDFIRRLLVKDPKRRMTIAQSLEHSWIK 270
>pdb|1DAW|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Amppnp
pdb|1DAY|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Gmppnp
pdb|1M2Q|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-Xanten-9-
OneCK2 KINASE COMPLEX
pdb|1M2R|A Chain A, Crystal Structure Of 5,8-Di-Amino-1,4-Di-Hydroxy-
AnthraquinoneCK2 KINASE COMPLEX
pdb|3KXM|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor K74
pdb|3KXN|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor Tetraiodobenzimidazole (K88)
Length = 327
Score = 115 bits (287), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 85/302 (28%), Positives = 153/302 (50%), Gaps = 27/302 (8%)
Query: 2 DKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLNLREVKCLRKL-NHS 60
D Y +++GRG + VF+ + + E IK LK RE+K L+ L
Sbjct: 31 DDYEVVRKVGRGKYSEVFEGINVNNNEKCIIKILKPVKKK----KIKREIKILQNLCGGP 86
Query: 61 NIVKLKELI--QNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMH 118
NIVKL +++ Q++ L+FE + ++++ ++ +I+ +++++ + L Y H
Sbjct: 87 NIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLYPT----LTDYDIRYYIYELLKALDYCH 142
Query: 119 QNGFFHRDLKPENLLVSQGI--IKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQSEL 176
G HRD+KP N+++ + +++ D+GLA G Y V SR+++ PE+L+ +
Sbjct: 143 SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQD 202
Query: 177 YSSKADMWAMGAIMAE-LFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLR-----Q 230
Y DMW++G + A +F P F G DQ+ KI VLG+ ++ + + R Q
Sbjct: 203 YDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKYRIELDPQ 262
Query: 231 ARAIKYQFPQLP-----RANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFFK 285
A+ + + P A+ L+ S +AI + L +D +R TA EA+ HP+F+
Sbjct: 263 LEALVGRHSRKPWLKFMNADNQHLV---SPEAIDFLDKLLRYDHQERLTALEAMTHPYFQ 319
Query: 286 RC 287
+
Sbjct: 320 QV 321
>pdb|4ANM|A Chain A, Complex Of Ck2 With A Cdc7 Inhibitor
Length = 335
Score = 115 bits (287), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 85/302 (28%), Positives = 153/302 (50%), Gaps = 27/302 (8%)
Query: 2 DKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLNLREVKCLRKL-NHS 60
D Y +++GRG + VF+ + + E IK LK RE+K L+ L
Sbjct: 33 DDYEVVRKVGRGKYSEVFEGINVNNNEKCIIKILKPVKKK----KIKREIKILQNLCGGP 88
Query: 61 NIVKLKELI--QNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMH 118
NIVKL +++ Q++ L+FE + ++++ ++ +I+ +++++ + L Y H
Sbjct: 89 NIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLYP----TLTDYDIRYYIYELLKALDYCH 144
Query: 119 QNGFFHRDLKPENLLVSQGI--IKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQSEL 176
G HRD+KP N+++ + +++ D+GLA G Y V SR+++ PE+L+ +
Sbjct: 145 SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQD 204
Query: 177 YSSKADMWAMGAIMAE-LFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLR-----Q 230
Y DMW++G + A +F P F G DQ+ KI VLG+ ++ + + R Q
Sbjct: 205 YDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKYRIELDPQ 264
Query: 231 ARAIKYQFPQLP-----RANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFFK 285
A+ + + P A+ L+ S +AI + L +D +R TA EA+ HP+F+
Sbjct: 265 LEALVGRHSRKPWLKFMNADNQHLV---SPEAIDFLDKLLRYDHQERLTALEAMTHPYFQ 321
Query: 286 RC 287
+
Sbjct: 322 QV 323
>pdb|1M2P|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-
AnthraquinoneCK2 KINASE COMPLEX
pdb|4DGO|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Tyrphostin
Ag99
Length = 325
Score = 115 bits (287), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 85/302 (28%), Positives = 153/302 (50%), Gaps = 27/302 (8%)
Query: 2 DKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLNLREVKCLRKL-NHS 60
D Y +++GRG + VF+ + + E IK LK RE+K L+ L
Sbjct: 31 DDYEVVRKVGRGKYSEVFEGINVNNNEKCIIKILKPVKKK----KIKREIKILQNLCGGP 86
Query: 61 NIVKLKELI--QNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMH 118
NIVKL +++ Q++ L+FE + ++++ ++ +I+ +++++ + L Y H
Sbjct: 87 NIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLYPT----LTDYDIRYYIYELLKALDYCH 142
Query: 119 QNGFFHRDLKPENLLVSQGI--IKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQSEL 176
G HRD+KP N+++ + +++ D+GLA G Y V SR+++ PE+L+ +
Sbjct: 143 SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQD 202
Query: 177 YSSKADMWAMGAIMAE-LFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLR-----Q 230
Y DMW++G + A +F P F G DQ+ KI VLG+ ++ + + R Q
Sbjct: 203 YDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKYRIELDPQ 262
Query: 231 ARAIKYQFPQLP-----RANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFFK 285
A+ + + P A+ L+ S +AI + L +D +R TA EA+ HP+F+
Sbjct: 263 LEALVGRHSRKPWLKFMNADNQHLV---SPEAIDFLDKLLRYDHQERLTALEAMTHPYFQ 319
Query: 286 RC 287
+
Sbjct: 320 QV 321
>pdb|3H30|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
pdb|3H30|B Chain B, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
Length = 334
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 81/303 (26%), Positives = 148/303 (48%), Gaps = 35/303 (11%)
Query: 2 DKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLNLREVKCLRKLNHSN 61
D Y ++LGRG + VF+A + E V +K LK + ++ ++ LR N
Sbjct: 37 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKK-KIKREIKILENLR--GGPN 93
Query: 62 IVKLKELIQN--NNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQ 119
I+ L +++++ + LVFE + ++ + + ++ +I+ +++++ + L Y H
Sbjct: 94 IITLADIVKDPVSRTPALVFEHVNNTDFKQLY----QTLTDYDIRFYMYEILKALDYCHS 149
Query: 120 NGFFHRDLKPENLLVSQGI--IKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQSELY 177
G HRD+KP N+++ +++ D+GLA G Y V SR+++ PE+L+ ++Y
Sbjct: 150 MGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMY 209
Query: 178 SSKADMWAMGAIMAE-LFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQARAIKY 236
DMW++G ++A +F P F G DQ+ +I VLG+ + + D KY
Sbjct: 210 DYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYID--------KY 261
Query: 237 QFPQLPRAN----------LSALMPSASQ-----DAISLFESLCSWDPSKRPTAAEALQH 281
PR N + S +Q +A+ + L +D R TA EA++H
Sbjct: 262 NIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEH 321
Query: 282 PFF 284
P+F
Sbjct: 322 PYF 324
>pdb|1JWH|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|1JWH|B Chain B, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|3PE1|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-4945
pdb|3PE2|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 In Complex
With The Inhibitor Cx-5011
pdb|3R0T|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-5279
Length = 337
Score = 114 bits (284), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 81/303 (26%), Positives = 148/303 (48%), Gaps = 35/303 (11%)
Query: 2 DKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLNLREVKCLRKLNHSN 61
D Y ++LGRG + VF+A + E V +K LK + ++ ++ LR N
Sbjct: 37 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKK-KIKREIKILENLR--GGPN 93
Query: 62 IVKLKELIQN--NNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQ 119
I+ L +++++ + LVFE + ++ + + ++ +I+ +++++ + L Y H
Sbjct: 94 IITLADIVKDPVSRTPALVFEHVNNTDFKQLY----QTLTDYDIRFYMYEILKALDYCHS 149
Query: 120 NGFFHRDLKPENLLVSQGI--IKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQSELY 177
G HRD+KP N+++ +++ D+GLA G Y V SR+++ PE+L+ ++Y
Sbjct: 150 MGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMY 209
Query: 178 SSKADMWAMGAIMAE-LFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQARAIKY 236
DMW++G ++A +F P F G DQ+ +I VLG+ + + D KY
Sbjct: 210 DYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYID--------KY 261
Query: 237 QFPQLPRAN----------LSALMPSASQ-----DAISLFESLCSWDPSKRPTAAEALQH 281
PR N + S +Q +A+ + L +D R TA EA++H
Sbjct: 262 NIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEH 321
Query: 282 PFF 284
P+F
Sbjct: 322 PYF 324
>pdb|2R7I|A Chain A, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|B Chain B, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|C Chain C, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|D Chain D, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
Length = 335
Score = 114 bits (284), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 81/303 (26%), Positives = 148/303 (48%), Gaps = 35/303 (11%)
Query: 2 DKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLNLREVKCLRKLNHSN 61
D Y ++LGRG + VF+A + E V +K LK + ++ ++ LR N
Sbjct: 37 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKK-KIKREIKILENLR--GGPN 93
Query: 62 IVKLKELIQN--NNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQ 119
I+ L +++++ + LVFE + ++ + + ++ +I+ +++++ + L Y H
Sbjct: 94 IITLADIVKDPVSRTPALVFEHVNNTDFKQLY----QTLTDYDIRFYMYEILKALDYCHS 149
Query: 120 NGFFHRDLKPENLLVSQGI--IKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQSELY 177
G HRD+KP N+++ +++ D+GLA G Y V SR+++ PE+L+ ++Y
Sbjct: 150 MGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMY 209
Query: 178 SSKADMWAMGAIMAE-LFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQARAIKY 236
DMW++G ++A +F P F G DQ+ +I VLG+ + + D KY
Sbjct: 210 DYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYID--------KY 261
Query: 237 QFPQLPRAN----------LSALMPSASQ-----DAISLFESLCSWDPSKRPTAAEALQH 281
PR N + S +Q +A+ + L +D R TA EA++H
Sbjct: 262 NIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEH 321
Query: 282 PFF 284
P+F
Sbjct: 322 PYF 324
>pdb|3BQC|A Chain A, High Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3C13|A Chain A, Low Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3FWQ|A Chain A, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3FWQ|B Chain B, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3RPS|A Chain A, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3RPS|B Chain B, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3U9C|A Chain A, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|3U9C|B Chain B, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|4FBX|A Chain A, Complex Structure Of Human Protein Kinase Ck2 Catalytic
Subunit Crystallized In The Presence Of A Bisubstrate
Inhibitor
Length = 335
Score = 114 bits (284), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 81/303 (26%), Positives = 148/303 (48%), Gaps = 35/303 (11%)
Query: 2 DKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLNLREVKCLRKLNHSN 61
D Y ++LGRG + VF+A + E V +K LK + ++ ++ LR N
Sbjct: 37 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKK-KIKREIKILENLR--GGPN 93
Query: 62 IVKLKELIQN--NNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQ 119
I+ L +++++ + LVFE + ++ + + ++ +I+ +++++ + L Y H
Sbjct: 94 IITLADIVKDPVSRTPALVFEHVNNTDFKQLY----QTLTDYDIRFYMYEILKALDYCHS 149
Query: 120 NGFFHRDLKPENLLVSQGI--IKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQSELY 177
G HRD+KP N+++ +++ D+GLA G Y V SR+++ PE+L+ ++Y
Sbjct: 150 MGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMY 209
Query: 178 SSKADMWAMGAIMAE-LFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQARAIKY 236
DMW++G ++A +F P F G DQ+ +I VLG+ + + D KY
Sbjct: 210 DYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYID--------KY 261
Query: 237 QFPQLPRAN----------LSALMPSASQ-----DAISLFESLCSWDPSKRPTAAEALQH 281
PR N + S +Q +A+ + L +D R TA EA++H
Sbjct: 262 NIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEH 321
Query: 282 PFF 284
P+F
Sbjct: 322 PYF 324
>pdb|1PJK|A Chain A, Crystal Structure Of A C-terminal Deletion Mutant Of Human
Protein Kinase Ck2 Catalytic Subunit
pdb|2PVR|A Chain A, Crystal Structure Of The Catalytic Subunit Of Protein
Kinase Ck2 (c- Terminal Deletion Mutant 1-335) In
Complex With Two Sulfate Ions
Length = 334
Score = 114 bits (284), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 81/303 (26%), Positives = 148/303 (48%), Gaps = 35/303 (11%)
Query: 2 DKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLNLREVKCLRKLNHSN 61
D Y ++LGRG + VF+A + E V +K LK + ++ ++ LR N
Sbjct: 36 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKK-KIKREIKILENLR--GGPN 92
Query: 62 IVKLKELIQN--NNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQ 119
I+ L +++++ + LVFE + ++ + + ++ +I+ +++++ + L Y H
Sbjct: 93 IITLADIVKDPVSRTPALVFEHVNNTDFKQLY----QTLTDYDIRFYMYEILKALDYCHS 148
Query: 120 NGFFHRDLKPENLLVSQGI--IKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQSELY 177
G HRD+KP N+++ +++ D+GLA G Y V SR+++ PE+L+ ++Y
Sbjct: 149 MGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMY 208
Query: 178 SSKADMWAMGAIMAE-LFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQARAIKY 236
DMW++G ++A +F P F G DQ+ +I VLG+ + + D KY
Sbjct: 209 DYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYID--------KY 260
Query: 237 QFPQLPRAN----------LSALMPSASQ-----DAISLFESLCSWDPSKRPTAAEALQH 281
PR N + S +Q +A+ + L +D R TA EA++H
Sbjct: 261 NIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEH 320
Query: 282 PFF 284
P+F
Sbjct: 321 PYF 323
>pdb|3Q9W|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 8.5
pdb|3Q9X|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9X|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9Y|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 8.5
pdb|3Q9Z|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3Q9Z|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3QA0|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
pdb|3QA0|B Chain B, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
Length = 336
Score = 114 bits (284), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 81/303 (26%), Positives = 148/303 (48%), Gaps = 35/303 (11%)
Query: 2 DKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLNLREVKCLRKLNHSN 61
D Y ++LGRG + VF+A + E V +K LK + ++ ++ LR N
Sbjct: 37 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKK-KIKREIKILENLR--GGPN 93
Query: 62 IVKLKELIQN--NNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQ 119
I+ L +++++ + LVFE + ++ + + ++ +I+ +++++ + L Y H
Sbjct: 94 IITLADIVKDPVSRTPALVFEHVNNTDFKQLY----QTLTDYDIRFYMYEILKALDYCHS 149
Query: 120 NGFFHRDLKPENLLVSQGI--IKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQSELY 177
G HRD+KP N+++ +++ D+GLA G Y V SR+++ PE+L+ ++Y
Sbjct: 150 MGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMY 209
Query: 178 SSKADMWAMGAIMAE-LFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQARAIKY 236
DMW++G ++A +F P F G DQ+ +I VLG+ + + D KY
Sbjct: 210 DYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYID--------KY 261
Query: 237 QFPQLPRAN----------LSALMPSASQ-----DAISLFESLCSWDPSKRPTAAEALQH 281
PR N + S +Q +A+ + L +D R TA EA++H
Sbjct: 262 NIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEH 321
Query: 282 PFF 284
P+F
Sbjct: 322 PYF 324
>pdb|3Q04|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
8.5
Length = 328
Score = 114 bits (284), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 81/303 (26%), Positives = 148/303 (48%), Gaps = 35/303 (11%)
Query: 2 DKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLNLREVKCLRKLNHSN 61
D Y ++LGRG + VF+A + E V +K LK + ++ ++ LR N
Sbjct: 35 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKK-KIKREIKILENLR--GGPN 91
Query: 62 IVKLKELIQN--NNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQ 119
I+ L +++++ + LVFE + ++ + + ++ +I+ +++++ + L Y H
Sbjct: 92 IITLADIVKDPVSRTPALVFEHVNNTDFKQLY----QTLTDYDIRFYMYEILKALDYCHS 147
Query: 120 NGFFHRDLKPENLLVSQGI--IKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQSELY 177
G HRD+KP N+++ +++ D+GLA G Y V SR+++ PE+L+ ++Y
Sbjct: 148 MGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMY 207
Query: 178 SSKADMWAMGAIMAE-LFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQARAIKY 236
DMW++G ++A +F P F G DQ+ +I VLG+ + + D KY
Sbjct: 208 DYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYID--------KY 259
Query: 237 QFPQLPRAN----------LSALMPSASQ-----DAISLFESLCSWDPSKRPTAAEALQH 281
PR N + S +Q +A+ + L +D R TA EA++H
Sbjct: 260 NIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEH 319
Query: 282 PFF 284
P+F
Sbjct: 320 PYF 322
>pdb|3NGA|A Chain A, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3NGA|B Chain B, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3U4U|A Chain A, Casein Kinase 2 In Complex With Az-Inhibitor
Length = 333
Score = 114 bits (284), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 81/303 (26%), Positives = 148/303 (48%), Gaps = 35/303 (11%)
Query: 2 DKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLNLREVKCLRKLNHSN 61
D Y ++LGRG + VF+A + E V +K LK + ++ ++ LR N
Sbjct: 37 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKK-KIKREIKILENLR--GGPN 93
Query: 62 IVKLKELIQN--NNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQ 119
I+ L +++++ + LVFE + ++ + + ++ +I+ +++++ + L Y H
Sbjct: 94 IITLADIVKDPVSRTPALVFEHVNNTDFKQLY----QTLTDYDIRFYMYEILKALDYCHS 149
Query: 120 NGFFHRDLKPENLLVSQGI--IKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQSELY 177
G HRD+KP N+++ +++ D+GLA G Y V SR+++ PE+L+ ++Y
Sbjct: 150 MGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMY 209
Query: 178 SSKADMWAMGAIMAE-LFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQARAIKY 236
DMW++G ++A +F P F G DQ+ +I VLG+ + + D KY
Sbjct: 210 DYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYID--------KY 261
Query: 237 QFPQLPRAN----------LSALMPSASQ-----DAISLFESLCSWDPSKRPTAAEALQH 281
PR N + S +Q +A+ + L +D R TA EA++H
Sbjct: 262 NIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEH 321
Query: 282 PFF 284
P+F
Sbjct: 322 PYF 324
>pdb|2ZJW|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Ellagic Acid
pdb|3AMY|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Apigenin
pdb|3AT2|A Chain A, Crystal Structure Of Ck2alpha
pdb|3AT3|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivative
pdb|3AT4|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivertive
pdb|3AXW|A Chain A, Crystal Structure Of Human Ck2alpha Complexed With A
Potent Inhibitor
Length = 340
Score = 114 bits (284), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 81/303 (26%), Positives = 148/303 (48%), Gaps = 35/303 (11%)
Query: 2 DKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLNLREVKCLRKLNHSN 61
D Y ++LGRG + VF+A + E V +K LK + ++ ++ LR N
Sbjct: 42 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKK-KIKREIKILENLR--GGPN 98
Query: 62 IVKLKELIQN--NNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQ 119
I+ L +++++ + LVFE + ++ + + ++ +I+ +++++ + L Y H
Sbjct: 99 IITLADIVKDPVSRTPALVFEHVNNTDFKQLY----QTLTDYDIRFYMYEILKALDYCHS 154
Query: 120 NGFFHRDLKPENLLVSQGI--IKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQSELY 177
G HRD+KP N+++ +++ D+GLA G Y V SR+++ PE+L+ ++Y
Sbjct: 155 MGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMY 214
Query: 178 SSKADMWAMGAIMAE-LFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQARAIKY 236
DMW++G ++A +F P F G DQ+ +I VLG+ + + D KY
Sbjct: 215 DYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYID--------KY 266
Query: 237 QFPQLPRAN----------LSALMPSASQ-----DAISLFESLCSWDPSKRPTAAEALQH 281
PR N + S +Q +A+ + L +D R TA EA++H
Sbjct: 267 NIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEH 326
Query: 282 PFF 284
P+F
Sbjct: 327 PYF 329
>pdb|3MB6|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Cpa)
pdb|3MB7|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Amr)
pdb|3OWJ|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Pyridocarbazole Derivative Inhibitor
pdb|3OWK|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
pdb|3OWL|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
Length = 331
Score = 114 bits (284), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 81/303 (26%), Positives = 148/303 (48%), Gaps = 35/303 (11%)
Query: 2 DKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLNLREVKCLRKLNHSN 61
D Y ++LGRG + VF+A + E V +K LK + ++ ++ LR N
Sbjct: 37 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKK-KIKREIKILENLR--GGPN 93
Query: 62 IVKLKELIQN--NNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQ 119
I+ L +++++ + LVFE + ++ + + ++ +I+ +++++ + L Y H
Sbjct: 94 IITLADIVKDPVSRTPALVFEHVNNTDFKQLY----QTLTDYDIRFYMYEILKALDYCHS 149
Query: 120 NGFFHRDLKPENLLVSQGI--IKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQSELY 177
G HRD+KP N+++ +++ D+GLA G Y V SR+++ PE+L+ ++Y
Sbjct: 150 MGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMY 209
Query: 178 SSKADMWAMGAIMAE-LFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQARAIKY 236
DMW++G ++A +F P F G DQ+ +I VLG+ + + D KY
Sbjct: 210 DYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYID--------KY 261
Query: 237 QFPQLPRAN----------LSALMPSASQ-----DAISLFESLCSWDPSKRPTAAEALQH 281
PR N + S +Q +A+ + L +D R TA EA++H
Sbjct: 262 NIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEH 321
Query: 282 PFF 284
P+F
Sbjct: 322 PYF 324
>pdb|3NSZ|A Chain A, Human Ck2 Catalytic Domain In Complex With Amppn
Length = 330
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 81/303 (26%), Positives = 148/303 (48%), Gaps = 35/303 (11%)
Query: 2 DKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLNLREVKCLRKLNHSN 61
D Y ++LGRG + VF+A + E V +K LK + ++ ++ LR N
Sbjct: 36 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKK-KIKREIKILENLR--GGPN 92
Query: 62 IVKLKELIQN--NNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQ 119
I+ L +++++ + LVFE + ++ + + ++ +I+ +++++ + L Y H
Sbjct: 93 IITLADIVKDPVSRTPALVFEHVNNTDFKQLY----QTLTDYDIRFYMYEILKALDYCHS 148
Query: 120 NGFFHRDLKPENLLVSQGI--IKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQSELY 177
G HRD+KP N+++ +++ D+GLA G Y V SR+++ PE+L+ ++Y
Sbjct: 149 MGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMY 208
Query: 178 SSKADMWAMGAIMAE-LFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQARAIKY 236
DMW++G ++A +F P F G DQ+ +I VLG+ + + D KY
Sbjct: 209 DYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYID--------KY 260
Query: 237 QFPQLPRAN----------LSALMPSASQ-----DAISLFESLCSWDPSKRPTAAEALQH 281
PR N + S +Q +A+ + L +D R TA EA++H
Sbjct: 261 NIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEH 320
Query: 282 PFF 284
P+F
Sbjct: 321 PYF 323
>pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
pdb|3U87|B Chain B, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
Length = 349
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 81/303 (26%), Positives = 146/303 (48%), Gaps = 35/303 (11%)
Query: 2 DKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLNLREVKCLRKLNHSN 61
D Y ++LGRG + VF+A + E V +K LK + ++ ++ LR N
Sbjct: 37 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKK-KIKREIKILENLR--GGPN 93
Query: 62 IVKLKELIQN--NNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQ 119
I+ L +++++ + LVFE + ++ + + ++ +I+ +++++ + L Y H
Sbjct: 94 IITLADIVKDPVSRTPALVFEHVNNTDFKQLY----QTLTDYDIRFYMYEILKALDYCHS 149
Query: 120 NGFFHRDLKPENLLVSQGI--IKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQSELY 177
G HRD+KP N+++ +++ D+GLA G Y V SR+++ PE+L+ ++Y
Sbjct: 150 MGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMY 209
Query: 178 SSKADMWAMGAIMAE-LFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQARAIKY 236
DMW++G ++A +F P F G DQ+ +I VLG+ + + D KY
Sbjct: 210 DYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYID--------KY 261
Query: 237 QFPQLPRAN---------------LSALMPSASQDAISLFESLCSWDPSKRPTAAEALQH 281
PR N S S +A+ + L +D R TA EA++H
Sbjct: 262 NIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEH 321
Query: 282 PFF 284
P+F
Sbjct: 322 PYF 324
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 69/207 (33%), Positives = 113/207 (54%), Gaps = 9/207 (4%)
Query: 4 YSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLNL--REVKCLRKLNHSN 61
Y K LG G+FG+V A+ TG+ VA+K + ++ + D RE+ LR L H +
Sbjct: 10 YQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPH 69
Query: 62 IVKLKELIQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQNG 121
I+KL ++I++ + + +V E L+ + RD+ SE E + + Q+ + Y H++
Sbjct: 70 IIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDK--MSEQEARRFFQQIISAVEYCHRHK 127
Query: 122 FFHRDLKPENLLVSQGI-IKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQSELYSS- 179
HRDLKPENLL+ + + +KIADFGL+ + G GS Y APE+ + +LY+
Sbjct: 128 IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEV-ISGKLYAGP 186
Query: 180 KADMWAMGAIMAELFTFCPLFPGASEA 206
+ D+W+ G I+ + C P E+
Sbjct: 187 EVDVWSCGVILYVM--LCRRLPFDDES 211
>pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform
Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo
Sapiens
Length = 350
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 79/295 (26%), Positives = 148/295 (50%), Gaps = 19/295 (6%)
Query: 2 DKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLNLREVKCLRKLNHSN 61
D Y ++LGRG + VF+A + E V +K LK + ++ ++ LR +N
Sbjct: 38 DDYQLVRKLGRGKYSEVFEAINITNNERVVVKILKPVKKK-KIKREVKILENLR--GGTN 94
Query: 62 IVKLKELIQN--NNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQ 119
I+KL + +++ + LVFE + ++ + ++ ++ +I+ +++++ + L Y H
Sbjct: 95 IIKLIDTVKDPVSKTPALVFEYINNTDFKQLY----QILTDFDIRFYMYELLKALDYCHS 150
Query: 120 NGFFHRDLKPENLLVS--QGIIKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQSELY 177
G HRD+KP N+++ Q +++ D+GLA Y V SR+++ PE+L+ ++Y
Sbjct: 151 KGIMHRDVKPHNVMIDHQQKKLRLIDWGLAEFYHPAQEYNVRVASRYFKGPELLVDYQMY 210
Query: 178 SSKADMWAMGAIMAE-LFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQARAIKY 236
DMW++G ++A +F P F G DQ+ +I VLG+ + + +
Sbjct: 211 DYSLDMWSLGCMLASMIFRREPFFHGQDNYDQLVRIAKVLGTEELYGYLKKYHIDLDPHF 270
Query: 237 Q--FPQLPRANLSALMPS-----ASQDAISLFESLCSWDPSKRPTAAEALQHPFF 284
Q R + S S +A+ L + L +D +R TA EA++HP+F
Sbjct: 271 NDILGQHSRKRWENFIHSENRHLVSPEALDLLDKLLRYDHQQRLTAKEAMEHPYF 325
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 69/207 (33%), Positives = 113/207 (54%), Gaps = 9/207 (4%)
Query: 4 YSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLNL--REVKCLRKLNHSN 61
Y K LG G+FG+V A+ TG+ VA+K + ++ + D RE+ LR L H +
Sbjct: 15 YQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPH 74
Query: 62 IVKLKELIQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQNG 121
I+KL ++I++ + + +V E L+ + RD+ SE E + + Q+ + Y H++
Sbjct: 75 IIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDK--MSEQEARRFFQQIISAVEYCHRHK 132
Query: 122 FFHRDLKPENLLVSQGI-IKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQSELYSS- 179
HRDLKPENLL+ + + +KIADFGL+ + G GS Y APE+ + +LY+
Sbjct: 133 IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEV-ISGKLYAGP 191
Query: 180 KADMWAMGAIMAELFTFCPLFPGASEA 206
+ D+W+ G I+ + C P E+
Sbjct: 192 EVDVWSCGVILYVM--LCRRLPFDDES 216
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 69/207 (33%), Positives = 113/207 (54%), Gaps = 9/207 (4%)
Query: 4 YSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLNL--REVKCLRKLNHSN 61
Y K LG G+FG+V A+ TG+ VA+K + ++ + D RE+ LR L H +
Sbjct: 16 YQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPH 75
Query: 62 IVKLKELIQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQNG 121
I+KL ++I++ + + +V E L+ + RD+ SE E + + Q+ + Y H++
Sbjct: 76 IIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDK--MSEQEARRFFQQIISAVEYCHRHK 133
Query: 122 FFHRDLKPENLLVSQGI-IKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQSELYSS- 179
HRDLKPENLL+ + + +KIADFGL+ + G GS Y APE+ + +LY+
Sbjct: 134 IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEV-ISGKLYAGP 192
Query: 180 KADMWAMGAIMAELFTFCPLFPGASEA 206
+ D+W+ G I+ + C P E+
Sbjct: 193 EVDVWSCGVILYVM--LCRRLPFDDES 217
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 113 bits (282), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 69/207 (33%), Positives = 113/207 (54%), Gaps = 9/207 (4%)
Query: 4 YSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLNL--REVKCLRKLNHSN 61
Y K LG G+FG+V A+ TG+ VA+K + ++ + D RE+ LR L H +
Sbjct: 6 YQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPH 65
Query: 62 IVKLKELIQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQNG 121
I+KL ++I++ + + +V E L+ + RD+ SE E + + Q+ + Y H++
Sbjct: 66 IIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDK--MSEQEARRFFQQIISAVEYCHRHK 123
Query: 122 FFHRDLKPENLLVSQGI-IKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQSELYSS- 179
HRDLKPENLL+ + + +KIADFGL+ + G GS Y APE+ + +LY+
Sbjct: 124 IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEV-ISGKLYAGP 182
Query: 180 KADMWAMGAIMAELFTFCPLFPGASEA 206
+ D+W+ G I+ + C P E+
Sbjct: 183 EVDVWSCGVILYVM--LCRRLPFDDES 207
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 113 bits (282), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 86/291 (29%), Positives = 127/291 (43%), Gaps = 40/291 (13%)
Query: 2 DKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLNLREVKCLRKLNHSN 61
D Y LG GAF V A D+ T + VAIK + ++ ++ E+ L K+ H N
Sbjct: 18 DIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPN 77
Query: 62 IVKLKELIQNNNRLYLVFECMECN-LYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQN 120
IV L ++ ++ LYL+ + + L+ + ++ ++E + +FQV + Y+H
Sbjct: 78 IVALDDIYESGGHLYLIMQLVSGGELFDRIV--EKGFYTERDASRLIFQVLDAVKYLHDL 135
Query: 121 GFFHRDLKPENLLV----SQGIIKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQSEL 176
G HRDLKPENLL I I+DFGL++ G + G+ Y APE+L Q
Sbjct: 136 GIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQKP- 194
Query: 177 YSSKADMWAMGAIMAELFTFCPLFPGASEA---DQMYKICGVLGSPTMDSWADGLRQARA 233
YS D W++G I L P F ++A +Q+ K SP D +D
Sbjct: 195 YSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDS------ 248
Query: 234 IKYQFPQLPRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFF 284
A L DP KR T +ALQHP+
Sbjct: 249 -----------------------AKDFIRHLMEKDPEKRFTCEQALQHPWI 276
>pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein
Kinase Ck2alpha Prime With A Potent Indazole-Derivative
Inhibitor
Length = 339
Score = 113 bits (282), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 79/295 (26%), Positives = 148/295 (50%), Gaps = 19/295 (6%)
Query: 2 DKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLNLREVKCLRKLNHSN 61
D Y ++LGRG + VF+A + E V +K LK + ++ ++ LR +N
Sbjct: 43 DDYQLVRKLGRGKYSEVFEAINITNNERVVVKILKPVKKK-KIKREVKILENLR--GGTN 99
Query: 62 IVKLKELIQN--NNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQ 119
I+KL + +++ + LVFE + ++ + ++ ++ +I+ +++++ + L Y H
Sbjct: 100 IIKLIDTVKDPVSKTPALVFEYINNTDFKQLY----QILTDFDIRFYMYELLKALDYCHS 155
Query: 120 NGFFHRDLKPENLLVS--QGIIKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQSELY 177
G HRD+KP N+++ Q +++ D+GLA Y V SR+++ PE+L+ ++Y
Sbjct: 156 KGIMHRDVKPHNVMIDHQQKKLRLIDWGLAEFYHPAQEYNVRVASRYFKGPELLVDYQMY 215
Query: 178 SSKADMWAMGAIMAE-LFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQARAIKY 236
DMW++G ++A +F P F G DQ+ +I VLG+ + + +
Sbjct: 216 DYSLDMWSLGCMLASMIFRREPFFHGQDNYDQLVRIAKVLGTEELYGYLKKYHIDLDPHF 275
Query: 237 Q--FPQLPRANLSALMPS-----ASQDAISLFESLCSWDPSKRPTAAEALQHPFF 284
Q R + S S +A+ L + L +D +R TA EA++HP+F
Sbjct: 276 NDILGQHSRKRWENFIHSENRHLVSPEALDLLDKLLRYDHQQRLTAKEAMEHPYF 330
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 113 bits (282), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 87/296 (29%), Positives = 141/296 (47%), Gaps = 36/296 (12%)
Query: 10 LGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLNLREVKCLRKL-NHSNIVKLKEL 68
LG GA+ +V A G+ A+K + ++ A REV+ L + + NI++L E
Sbjct: 21 LGEGAYAKVQGAVSLQNGKEYAVK-IIEKQAGHSRSRVFREVETLYQCQGNKNILELIEF 79
Query: 69 IQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQNGFFHRDLK 128
+++ R YLVFE ++ L + +K F+E E + V L ++H G HRDLK
Sbjct: 80 FEDDTRFYLVFEKLQGGSI-LAHIQKQKHFNEREASRVVRDVAAALDFLHTKGIAHRDLK 138
Query: 129 PENLLVSQ----GIIKIADFGLAREIK--------SGPPYTNYVGSRWYRAPEILL---- 172
PEN+L +KI DF L +K + P T GS Y APE++
Sbjct: 139 PENILCESPEKVSPVKICDFDLGSGMKLNNSCTPITTPELTTPCGSAEYMAPEVVEVFTD 198
Query: 173 QSELYSSKADMWAMGAIMAELFTFCPLFPGASEADQMY---KICGVLGSPTMDSWADGLR 229
Q+ Y + D+W++G ++ + + P F G AD + ++C V + +S +G
Sbjct: 199 QATFYDKRCDLWSLGVVLYIMLSGYPPFVGHCGADCGWDRGEVCRVCQNKLFESIQEG-- 256
Query: 230 QARAIKYQFPQLPRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFFK 285
KY+FP A++S+ +A L L D +R +AA+ LQHP+ +
Sbjct: 257 -----KYEFPDKDWAHISS-------EAKDLISKLLVRDAKQRLSAAQVLQHPWVQ 300
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 112 bits (281), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 85/297 (28%), Positives = 139/297 (46%), Gaps = 44/297 (14%)
Query: 2 DKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRY-------ASWEDCLNLREVKCL 54
D Y +ELG G F V + + TG+ A K +K+R S E+ REV L
Sbjct: 26 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLXSSRRGVSREEIE--REVNIL 83
Query: 55 RKLNHSNIVKLKELIQNNNRLYLVFECMECN-LYQLMAARDRKLFSEPEIKAWLFQVFQG 113
R++ H NI+ L ++ +N + L+ E + L+ +A ++ +E E +L Q+ G
Sbjct: 84 REIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKES--LTEDEATQFLKQILDG 141
Query: 114 LSYMHQNGFFHRDLKPENL-LVSQGI----IKIADFGLAREIKSGPPYTNYVGSRWYRAP 168
+ Y+H H DLKPEN+ L+ + + IK+ DFG+A +I++G + N G+ + AP
Sbjct: 142 VHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVAP 201
Query: 169 EILLQSELYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGL 228
EI + E +ADMW++G I L + F G ++ + + I
Sbjct: 202 EI-VNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNIS--------------- 245
Query: 229 RQARAIKYQFPQLPRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFFK 285
A+ Y F + +N S L A L DP +R A++L+H + K
Sbjct: 246 ----AVNYDFDEEYFSNTSEL-------AKDFIRRLLVKDPKRRMXIAQSLEHSWIK 291
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 112 bits (280), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 85/297 (28%), Positives = 139/297 (46%), Gaps = 44/297 (14%)
Query: 2 DKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRY-------ASWEDCLNLREVKCL 54
D Y +ELG G F V + + TG+ A K +K+R S E+ REV L
Sbjct: 12 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIE--REVNIL 69
Query: 55 RKLNHSNIVKLKELIQNNNRLYLVFECMEC-NLYQLMAARDRKLFSEPEIKAWLFQVFQG 113
R++ H NI+ L ++ +N + L+ E + L+ +A ++ +E E +L Q+ G
Sbjct: 70 REIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKES--LTEDEATQFLKQILDG 127
Query: 114 LSYMHQNGFFHRDLKPENL-LVSQGI----IKIADFGLAREIKSGPPYTNYVGSRWYRAP 168
+ Y+H H DLKPEN+ L+ + + IK+ DFG+A +I++G + N G+ + AP
Sbjct: 128 VHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVAP 187
Query: 169 EILLQSELYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGL 228
EI + E +ADMW++G I L + F G ++ + + I
Sbjct: 188 EI-VNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNIS--------------- 231
Query: 229 RQARAIKYQFPQLPRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFFK 285
A+ Y F + +N S L A L DP +R A++L+H + K
Sbjct: 232 ----AVNYDFDEEYFSNTSEL-------AKDFIRRLLVKDPKRRMXIAQSLEHSWIK 277
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 112 bits (280), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 88/300 (29%), Positives = 138/300 (46%), Gaps = 43/300 (14%)
Query: 1 MDKYSGF-----KELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLN--LREVKC 53
M+ ++ F KELGRG F V Q + TG+ A K LK+R +DC L E+
Sbjct: 23 MENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRG-QDCRAEILHEIAV 81
Query: 54 LRKLNHS--NIVKLKELIQNNNRLYLVFE-CMECNLYQLMAARDRKLFSEPEIKAWLFQV 110
L +L S ++ L E+ +N + + L+ E ++ L ++ SE ++ + Q+
Sbjct: 82 L-ELAKSCPRVINLHEVYENTSEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQI 140
Query: 111 FQGLSYMHQNGFFHRDLKPENLLVSQ----GIIKIADFGLAREIKSGPPYTNYVGSRWYR 166
+G+ Y+HQN H DLKP+N+L+S G IKI DFG++R+I +G+ Y
Sbjct: 141 LEGVYYLHQNNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHACELREIMGTPEYL 200
Query: 167 APEILLQSELYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWAD 226
APEI L + ++ DMW +G I L T F G + I V + ++++
Sbjct: 201 APEI-LNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQETYLNISQVNVDYSEETFS- 258
Query: 227 GLRQARAIKYQFPQLPRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFFKR 286
S SQ A +SL +P KRPTA L H + ++
Sbjct: 259 -------------------------SVSQLATDFIQSLLVKNPEKRPTAEICLSHSWLQQ 293
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 112 bits (279), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 86/291 (29%), Positives = 126/291 (43%), Gaps = 40/291 (13%)
Query: 2 DKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLNLREVKCLRKLNHSN 61
D Y LG GAF V A D+ T + VAIK + + ++ E+ L K+ H N
Sbjct: 18 DIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPN 77
Query: 62 IVKLKELIQNNNRLYLVFECMECN-LYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQN 120
IV L ++ ++ LYL+ + + L+ + ++ ++E + +FQV + Y+H
Sbjct: 78 IVALDDIYESGGHLYLIMQLVSGGELFDRIV--EKGFYTERDASRLIFQVLDAVKYLHDL 135
Query: 121 GFFHRDLKPENLLV----SQGIIKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQSEL 176
G HRDLKPENLL I I+DFGL++ G + G+ Y APE+L Q
Sbjct: 136 GIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQKP- 194
Query: 177 YSSKADMWAMGAIMAELFTFCPLFPGASEA---DQMYKICGVLGSPTMDSWADGLRQARA 233
YS D W++G I L P F ++A +Q+ K SP D +D
Sbjct: 195 YSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDS------ 248
Query: 234 IKYQFPQLPRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFF 284
A L DP KR T +ALQHP+
Sbjct: 249 -----------------------AKDFIRHLMEKDPEKRFTCEQALQHPWI 276
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 112 bits (279), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 86/291 (29%), Positives = 126/291 (43%), Gaps = 40/291 (13%)
Query: 2 DKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLNLREVKCLRKLNHSN 61
D Y LG GAF V A D+ T + VAIK + + ++ E+ L K+ H N
Sbjct: 18 DIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPN 77
Query: 62 IVKLKELIQNNNRLYLVFECMECN-LYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQN 120
IV L ++ ++ LYL+ + + L+ + ++ ++E + +FQV + Y+H
Sbjct: 78 IVALDDIYESGGHLYLIMQLVSGGELFDRIV--EKGFYTERDASRLIFQVLDAVKYLHDL 135
Query: 121 GFFHRDLKPENLLV----SQGIIKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQSEL 176
G HRDLKPENLL I I+DFGL++ G + G+ Y APE+L Q
Sbjct: 136 GIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQKP- 194
Query: 177 YSSKADMWAMGAIMAELFTFCPLFPGASEA---DQMYKICGVLGSPTMDSWADGLRQARA 233
YS D W++G I L P F ++A +Q+ K SP D +D
Sbjct: 195 YSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDS------ 248
Query: 234 IKYQFPQLPRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFF 284
A L DP KR T +ALQHP+
Sbjct: 249 -----------------------AKDFIRHLMEKDPEKRFTCEQALQHPWI 276
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 111 bits (278), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 86/291 (29%), Positives = 126/291 (43%), Gaps = 40/291 (13%)
Query: 2 DKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLNLREVKCLRKLNHSN 61
D Y LG GAF V A D+ T + VAIK + + ++ E+ L K+ H N
Sbjct: 18 DIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPN 77
Query: 62 IVKLKELIQNNNRLYLVFECMECN-LYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQN 120
IV L ++ ++ LYL+ + + L+ + ++ ++E + +FQV + Y+H
Sbjct: 78 IVALDDIYESGGHLYLIMQLVSGGELFDRIV--EKGFYTERDASRLIFQVLDAVKYLHDL 135
Query: 121 GFFHRDLKPENLLV----SQGIIKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQSEL 176
G HRDLKPENLL I I+DFGL++ G + G+ Y APE+L Q
Sbjct: 136 GIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQKP- 194
Query: 177 YSSKADMWAMGAIMAELFTFCPLFPGASEA---DQMYKICGVLGSPTMDSWADGLRQARA 233
YS D W++G I L P F ++A +Q+ K SP D +D
Sbjct: 195 YSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDS------ 248
Query: 234 IKYQFPQLPRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFF 284
A L DP KR T +ALQHP+
Sbjct: 249 -----------------------AKDFIRHLMEKDPEKRFTCEQALQHPWI 276
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 111 bits (278), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 85/284 (29%), Positives = 139/284 (48%), Gaps = 41/284 (14%)
Query: 10 LGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLNLR---EVKCLRKLNHSNIVKLK 66
LG+G+F V++A HTG VAIK + ++ A ++ + R EVK +L H +I++L
Sbjct: 19 LGKGSFAGVYRAESIHTGLEVAIKMIDKK-AMYKAGMVQRVQNEVKIHCQLKHPSILELY 77
Query: 67 ELIQNNNRLYLVFE-CMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQNGFFHR 125
+++N +YLV E C + + + R K FSE E + ++ Q+ G+ Y+H +G HR
Sbjct: 78 NYFEDSNYVYLVLEMCHNGEMNRYLKNR-VKPFSENEARHFMHQIITGMLYLHSHGILHR 136
Query: 126 DLKPENLLVSQGI-IKIADFGLAREIKSGPPYTNYV--GSRWYRAPEILLQSELYSSKAD 182
DL NLL+++ + IKIADFGLA ++K P +Y G+ Y +PEI +S + ++D
Sbjct: 137 DLTLSNLLLTRNMNIKIADFGLATQLKM-PHEKHYTLCGTPNYISPEIATRSA-HGLESD 194
Query: 183 MWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQARAIKYQFPQLP 242
+W++G + L P F D+ + L + Y+ P
Sbjct: 195 VWSLGCMFYTLLIGRPPFD-------------------TDTVKNTLNKVVLADYEMPSF- 234
Query: 243 RANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFFKR 286
S +A L L +P+ R + + L HPF R
Sbjct: 235 ----------LSIEAKDLIHQLLRRNPADRLSLSSVLDHPFMSR 268
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 111 bits (278), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 84/287 (29%), Positives = 133/287 (46%), Gaps = 41/287 (14%)
Query: 7 FKE-LGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLNLREVKCLRKLNHSNIVKL 65
FKE LG GAF V A ++ TG+ A+K + ++ ++ E+ LRK+ H NIV L
Sbjct: 26 FKETLGTGAFSEVVLAEEKATGKLFAVKCIPKKALKGKESSIENEIAVLRKIKHENIVAL 85
Query: 66 KELIQNNNRLYLVFECMEC-NLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQNGFFH 124
+++ ++ N LYLV + + L+ + ++ ++E + + QV + Y+H+ G H
Sbjct: 86 EDIYESPNHLYLVMQLVSGGELFDRIV--EKGFYTEKDASTLIRQVLDAVYYLHRMGIVH 143
Query: 125 RDLKPENLLV----SQGIIKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQSELYSSK 180
RDLKPENLL + I I+DFGL++ G + G+ Y APE+L Q YS
Sbjct: 144 RDLKPENLLYYSQDEESKIMISDFGLSKMEGKGDVMSTACGTPGYVAPEVLAQKP-YSKA 202
Query: 181 ADMWAMGAIMAELFTFCPLFPGASEA---DQMYKICGVLGSPTMDSWADGLRQARAIKYQ 237
D W++G I L P F +++ +Q+ K SP D +D
Sbjct: 203 VDCWSIGVIAYILLCGYPPFYDENDSKLFEQILKAEYEFDSPYWDDISDS---------- 252
Query: 238 FPQLPRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFF 284
A +L DP+KR T +A +HP+
Sbjct: 253 -------------------AKDFIRNLMEKDPNKRYTCEQAARHPWI 280
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 111 bits (278), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 87/282 (30%), Positives = 135/282 (47%), Gaps = 40/282 (14%)
Query: 9 ELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLNLREVKCLRKLNHSNIVKLKEL 68
ELGRGA V++ + T + A+K LK+ + + + E+ L +L+H NI+KLKE+
Sbjct: 60 ELGRGATSIVYRCKQKGTQKPYALKVLKK---TVDKKIVRTEIGVLLRLSHPNIIKLKEI 116
Query: 69 IQNNNRLYLVFECMECN-LYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQNGFFHRDL 127
+ + LV E + L+ + ++ +SE + + Q+ + ++Y+H+NG HRDL
Sbjct: 117 FETPTEISLVLELVTGGELFDRIV--EKGYYSERDAADAVKQILEAVAYLHENGIVHRDL 174
Query: 128 KPENLLVS----QGIIKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQSELYSSKADM 183
KPENLL + +KIADFGL++ ++ G+ Y APEI L+ Y + DM
Sbjct: 175 KPENLLYATPAPDAPLKIADFGLSKIVEHQVLMKTVCGTPGYCAPEI-LRGCAYGPEVDM 233
Query: 184 WAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADG--LRQARAIKYQFPQL 241
W++G I L +CG P D D R+ +Y F
Sbjct: 234 WSVGIITYIL------------------LCGF--EPFYDERGDQFMFRRILNCEYYF--- 270
Query: 242 PRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPF 283
+S S +A L L DP KR T +ALQHP+
Sbjct: 271 ----ISPWWDEVSLNAKDLVRKLIVLDPKKRLTTFQALQHPW 308
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 87/294 (29%), Positives = 136/294 (46%), Gaps = 44/294 (14%)
Query: 2 DKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYA-------SWEDCLNLREVKCL 54
D Y +ELG G F V + ++ TG A K +K+R + S E+ REV L
Sbjct: 12 DFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIE--REVSIL 69
Query: 55 RKLNHSNIVKLKELIQNNNRLYLVFECMEC-NLYQLMAARDRKLFSEPEIKAWLFQVFQG 113
R++ H N++ L ++ +N + L+ E + L+ +A ++ SE E +++ Q+ G
Sbjct: 70 RQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKES--LSEEEATSFIKQILDG 127
Query: 114 LSYMHQNGFFHRDLKPENL-LVSQGI----IKIADFGLAREIKSGPPYTNYVGSRWYRAP 168
++Y+H H DLKPEN+ L+ + I IK+ DFGLA EI+ G + N G+ + AP
Sbjct: 128 VNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAP 187
Query: 169 EILLQSELYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGL 228
EI + E +ADMW++G I L + F G D+ + L
Sbjct: 188 EI-VNYEPLGLEADMWSIGVITYILLSGASPFLG-------------------DTKQETL 227
Query: 229 RQARAIKYQFPQLPRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHP 282
A+ Y F + S+ A L + KR T EAL+HP
Sbjct: 228 ANITAVSYDFDE-------EFFSQTSELAKDFIRKLLVKETRKRLTIQEALRHP 274
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 110 bits (275), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 82/294 (27%), Positives = 138/294 (46%), Gaps = 36/294 (12%)
Query: 4 YSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLNLREVKCLRKLNHSNIV 63
Y+ +GRG++G V A + T A K++ + + D +E++ ++ L+H NI+
Sbjct: 11 YTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFK-QEIEIMKSLDHPNII 69
Query: 64 KLKELIQNNNRLYLVFE-CMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQNGF 122
+L E ++N +YLV E C L++ + +++F E + + V ++Y H+
Sbjct: 70 RLYETFEDNTDIYLVMELCTGGELFERVV--HKRVFRESDAARIMKDVLSAVAYCHKLNV 127
Query: 123 FHRDLKPENLLV----SQGIIKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQSELYS 178
HRDLKPEN L +K+ DFGLA K G VG+ +Y +P++L LY
Sbjct: 128 AHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTKVGTPYYVSPQVL--EGLYG 185
Query: 179 SKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQARAIKYQF 238
+ D W+ G +M L P F ++ + M KI R + F
Sbjct: 186 PECDEWSAGVMMYVLLCGYPPFSAPTDXEVMLKI-------------------REGTFTF 226
Query: 239 PQLPRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFFKRCFYAPP 292
P+ N+S P A SL L + P +R T+ +AL+H +F++ + P
Sbjct: 227 PEKDWLNVS---PQAE----SLIRRLLTKSPKQRITSLQALEHEWFEKQLSSSP 273
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 110 bits (275), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 86/294 (29%), Positives = 137/294 (46%), Gaps = 44/294 (14%)
Query: 2 DKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYA-------SWEDCLNLREVKCL 54
D Y +ELG G F V + ++ TG A K +K+R + S E+ REV L
Sbjct: 12 DFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIE--REVSIL 69
Query: 55 RKLNHSNIVKLKELIQNNNRLYLVFECMEC-NLYQLMAARDRKLFSEPEIKAWLFQVFQG 113
R++ H N++ L ++ +N + L+ E + L+ +A ++ SE E +++ Q+ G
Sbjct: 70 RQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKES--LSEEEATSFIKQILDG 127
Query: 114 LSYMHQNGFFHRDLKPENL-LVSQGI----IKIADFGLAREIKSGPPYTNYVGSRWYRAP 168
++Y+H H DLKPEN+ L+ + I IK+ DFGLA EI+ G + N G+ + AP
Sbjct: 128 VNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAP 187
Query: 169 EILLQSELYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGL 228
EI + E +ADMW++G I L + F G ++ + + I
Sbjct: 188 EI-VNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANIT--------------- 231
Query: 229 RQARAIKYQFPQLPRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHP 282
A+ Y F + S+ A L + KR T EAL+HP
Sbjct: 232 ----AVSYDFDE-------EFFSQTSELAKDFIRKLLVKETRKRLTIQEALRHP 274
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 110 bits (275), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 82/294 (27%), Positives = 138/294 (46%), Gaps = 36/294 (12%)
Query: 4 YSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLNLREVKCLRKLNHSNIV 63
Y+ +GRG++G V A + T A K++ + + D +E++ ++ L+H NI+
Sbjct: 28 YTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFK-QEIEIMKSLDHPNII 86
Query: 64 KLKELIQNNNRLYLVFE-CMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQNGF 122
+L E ++N +YLV E C L++ + +++F E + + V ++Y H+
Sbjct: 87 RLYETFEDNTDIYLVMELCTGGELFERVV--HKRVFRESDAARIMKDVLSAVAYCHKLNV 144
Query: 123 FHRDLKPENLLV----SQGIIKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQSELYS 178
HRDLKPEN L +K+ DFGLA K G VG+ +Y +P++L LY
Sbjct: 145 AHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTKVGTPYYVSPQVL--EGLYG 202
Query: 179 SKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQARAIKYQF 238
+ D W+ G +M L P F ++ + M KI R + F
Sbjct: 203 PECDEWSAGVMMYVLLCGYPPFSAPTDXEVMLKI-------------------REGTFTF 243
Query: 239 PQLPRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFFKRCFYAPP 292
P+ N+S P A SL L + P +R T+ +AL+H +F++ + P
Sbjct: 244 PEKDWLNVS---PQAE----SLIRRLLTKSPKQRITSLQALEHEWFEKQLSSSP 290
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 109 bits (273), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 86/294 (29%), Positives = 136/294 (46%), Gaps = 44/294 (14%)
Query: 2 DKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYA-------SWEDCLNLREVKCL 54
D Y +ELG G F V + ++ TG A K +K+R + S E+ REV L
Sbjct: 12 DFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIE--REVSIL 69
Query: 55 RKLNHSNIVKLKELIQNNNRLYLVFECMEC-NLYQLMAARDRKLFSEPEIKAWLFQVFQG 113
R++ H N++ L ++ +N + L+ E + L+ +A ++ SE E +++ Q+ G
Sbjct: 70 RQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKES--LSEEEATSFIKQILDG 127
Query: 114 LSYMHQNGFFHRDLKPENL-LVSQGI----IKIADFGLAREIKSGPPYTNYVGSRWYRAP 168
++Y+H H DLKPEN+ L+ + I IK+ DFGLA EI+ G + N G+ + AP
Sbjct: 128 VNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAP 187
Query: 169 EILLQSELYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGL 228
EI + E +ADMW++G I L + F G D+ + L
Sbjct: 188 EI-VNYEPLGLEADMWSIGVITYILLSGASPFLG-------------------DTKQETL 227
Query: 229 RQARAIKYQFPQLPRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHP 282
++ Y F + S+ A L + KR T EAL+HP
Sbjct: 228 ANITSVSYDFDE-------EFFSHTSELAKDFIRKLLVKETRKRLTIQEALRHP 274
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 109 bits (273), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 74/235 (31%), Positives = 120/235 (51%), Gaps = 16/235 (6%)
Query: 4 YSGFKELGRGAFGRVFQAFDEHTGEAVAIKEL----KQRYASWEDCLNLREVKCLRKLNH 59
+S +E+G G+FG V+ A D E VAIK++ KQ W+D + +EV+ L+KL H
Sbjct: 56 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDII--KEVRFLQKLRH 113
Query: 60 SNIVKLKELIQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQ 119
N ++ + + +LV E + L+ +K E EI A QGL+Y+H
Sbjct: 114 PNTIQYRGCYLREHTAWLVMEYCLGSASDLLEVH-KKPLQEVEIAAVTHGALQGLAYLHS 172
Query: 120 NGFFHRDLKPENLLVSQ-GIIKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQSE--L 176
+ HRD+K N+L+S+ G++K+ DFG A + P +VG+ ++ APE++L +
Sbjct: 173 HNMIHRDVKAGNILLSEPGLVKLGDFGSASIMA---PANXFVGTPYWMAPEVILAMDEGQ 229
Query: 177 YSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDS--WADGLR 229
Y K D+W++G EL P + +Y I SP + S W++ R
Sbjct: 230 YDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQN-ESPALQSGHWSEYFR 283
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 109 bits (273), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 86/294 (29%), Positives = 136/294 (46%), Gaps = 44/294 (14%)
Query: 2 DKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYA-------SWEDCLNLREVKCL 54
D Y +ELG G F V + ++ TG A K +K+R + S E+ REV L
Sbjct: 12 DFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIE--REVSIL 69
Query: 55 RKLNHSNIVKLKELIQNNNRLYLVFECMEC-NLYQLMAARDRKLFSEPEIKAWLFQVFQG 113
R++ H N++ L ++ +N + L+ E + L+ +A ++ SE E +++ Q+ G
Sbjct: 70 RQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKES--LSEEEATSFIKQILDG 127
Query: 114 LSYMHQNGFFHRDLKPENL-LVSQGI----IKIADFGLAREIKSGPPYTNYVGSRWYRAP 168
++Y+H H DLKPEN+ L+ + I IK+ DFGLA EI+ G + N G+ + AP
Sbjct: 128 VNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAP 187
Query: 169 EILLQSELYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGL 228
EI + E +ADMW++G I L + F G D+ + L
Sbjct: 188 EI-VNYEPLGLEADMWSIGVITYILLSGASPFLG-------------------DTKQETL 227
Query: 229 RQARAIKYQFPQLPRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHP 282
++ Y F + S+ A L + KR T EAL+HP
Sbjct: 228 ANITSVSYDFDE-------EFFSHTSELAKDFIRKLLVKETRKRLTIQEALRHP 274
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 109 bits (273), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 87/292 (29%), Positives = 134/292 (45%), Gaps = 40/292 (13%)
Query: 2 DKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWED---CLNL--REVKCLRK 56
D Y +ELG G F V + ++ TG A K +K+R + C REV LR+
Sbjct: 12 DFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQ 71
Query: 57 LNHSNIVKLKELIQNNNRLYLVFECMEC-NLYQLMAARDRKLFSEPEIKAWLFQVFQGLS 115
+ H NI+ L ++ +N + L+ E + L+ +A ++ SE E +++ Q+ G++
Sbjct: 72 VLHPNIITLHDVYENRTDVVLILELVSGGELFDFLAQKES--LSEEEATSFIKQILDGVN 129
Query: 116 YMHQNGFFHRDLKPENL-LVSQGI----IKIADFGLAREIKSGPPYTNYVGSRWYRAPEI 170
Y+H H DLKPEN+ L+ + I IK+ DFGLA EI+ G + N G+ + APEI
Sbjct: 130 YLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEI 189
Query: 171 LLQSELYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQ 230
+ E +ADMW++G I L + F G D+ + L
Sbjct: 190 -VNYEPLGLEADMWSIGVITYILLSGASPFLG-------------------DTKQETLAN 229
Query: 231 ARAIKYQFPQLPRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHP 282
A+ Y F + S+ A L + KR T EAL+HP
Sbjct: 230 ITAVSYDFDE-------EFFSQTSELAKDFIRKLLVKETRKRLTIQEALRHP 274
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 94/318 (29%), Positives = 146/318 (45%), Gaps = 63/318 (19%)
Query: 1 MDKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQ----RYASWE------------- 43
+++Y+ E+G+G++G V A++E+ A+K L + R A +
Sbjct: 12 LNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPG 71
Query: 44 DCLNLR--------EVKCLRKLNHSNIVKLKELIQ--NNNRLYLVFECMECNLYQLMAAR 93
C+ R E+ L+KL+H N+VKL E++ N + LY+VFE + N +M
Sbjct: 72 GCIQPRGPIEQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELV--NQGPVMEVP 129
Query: 94 DRKLFSEPEIKAWLFQVFQGLSYMHQNGFFHRDLKPENLLVSQ-GIIKIADFGLAREIK- 151
K SE + + + + +G+ Y+H HRD+KP NLLV + G IKIADFG++ E K
Sbjct: 130 TLKPLSEDQARFYFQDLIKGIEYLHYQKIIHRDIKPSNLLVGEDGHIKIADFGVSNEFKG 189
Query: 152 SGPPYTNYVGSRWYRAPEILLQS-ELYSSKA-DMWAMGAIMAELFTFCPLFPGASEADQM 209
S +N VG+ + APE L ++ +++S KA D+WAMG +
Sbjct: 190 SDALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTL------------------- 230
Query: 210 YKICGVLGS-PTMDSWADGLRQARAIKYQFPQLPRANLSALMPSASQDAISLFESLCSWD 268
C V G P MD L IK Q + P P ++D L + +
Sbjct: 231 --YCFVFGQCPFMDERIMCLHS--KIKSQALEFPD------QPDIAEDLKDLITRMLDKN 280
Query: 269 PSKRPTAAEALQHPFFKR 286
P R E HP+ R
Sbjct: 281 PESRIVVPEIKLHPWVTR 298
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 109 bits (272), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 86/294 (29%), Positives = 136/294 (46%), Gaps = 44/294 (14%)
Query: 2 DKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYA-------SWEDCLNLREVKCL 54
D Y +ELG G F V + ++ TG A K +K+R + S E+ REV L
Sbjct: 12 DFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIE--REVSIL 69
Query: 55 RKLNHSNIVKLKELIQNNNRLYLVFECMEC-NLYQLMAARDRKLFSEPEIKAWLFQVFQG 113
R++ H N++ L ++ +N + L+ E + L+ +A ++ SE E +++ Q+ G
Sbjct: 70 RQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKES--LSEEEATSFIKQILDG 127
Query: 114 LSYMHQNGFFHRDLKPENL-LVSQGI----IKIADFGLAREIKSGPPYTNYVGSRWYRAP 168
++Y+H H DLKPEN+ L+ + I IK+ DFGLA EI+ G + N G+ + AP
Sbjct: 128 VNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAP 187
Query: 169 EILLQSELYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGL 228
EI + E +ADMW++G I L + F G ++ + + I V
Sbjct: 188 EI-VNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSV------------- 233
Query: 229 RQARAIKYQFPQLPRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHP 282
Y F + S+ A L + KR T EAL+HP
Sbjct: 234 ------SYDFDE-------EFFSHTSELAKDFIRKLLVKETRKRLTIQEALRHP 274
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 109 bits (272), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 71/202 (35%), Positives = 102/202 (50%), Gaps = 5/202 (2%)
Query: 4 YSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLNL-REVKCLRKLNHSNI 62
Y K +G+G F +V A TG+ VA+K + + + L REV+ ++ LNH NI
Sbjct: 16 YRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNI 75
Query: 63 VKLKELIQNNNRLYLVFECMECN-LYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQNG 121
VKL E+I+ LYLV E ++ + A R E E +A Q+ + Y HQ
Sbjct: 76 VKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGR--MKEKEARAKFRQIVSAVQYCHQKF 133
Query: 122 FFHRDLKPENLLVSQGI-IKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQSELYSSK 180
HRDLK ENLL+ + IKIADFG + E G + GS Y APE+ + +
Sbjct: 134 IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKKYDGPE 193
Query: 181 ADMWAMGAIMAELFTFCPLFPG 202
D+W++G I+ L + F G
Sbjct: 194 VDVWSLGVILYTLVSGSLPFDG 215
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 109 bits (272), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 74/235 (31%), Positives = 120/235 (51%), Gaps = 16/235 (6%)
Query: 4 YSGFKELGRGAFGRVFQAFDEHTGEAVAIKEL----KQRYASWEDCLNLREVKCLRKLNH 59
+S +E+G G+FG V+ A D E VAIK++ KQ W+D + +EV+ L+KL H
Sbjct: 17 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDII--KEVRFLQKLRH 74
Query: 60 SNIVKLKELIQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQ 119
N ++ + + +LV E + L+ +K E EI A QGL+Y+H
Sbjct: 75 PNTIQYRGCYLREHTAWLVMEYCLGSASDLLEVH-KKPLQEVEIAAVTHGALQGLAYLHS 133
Query: 120 NGFFHRDLKPENLLVSQ-GIIKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQSE--L 176
+ HRD+K N+L+S+ G++K+ DFG A + P +VG+ ++ APE++L +
Sbjct: 134 HNMIHRDVKAGNILLSEPGLVKLGDFGSASIMA---PANXFVGTPYWMAPEVILAMDEGQ 190
Query: 177 YSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDS--WADGLR 229
Y K D+W++G EL P + +Y I SP + S W++ R
Sbjct: 191 YDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQN-ESPALQSGHWSEYFR 244
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 109 bits (272), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 71/204 (34%), Positives = 103/204 (50%), Gaps = 5/204 (2%)
Query: 4 YSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLNL-REVKCLRKLNHSNI 62
Y K +G+G F +V A TG+ VA+K + + + L REV+ ++ LNH NI
Sbjct: 16 YRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNI 75
Query: 63 VKLKELIQNNNRLYLVFECMECN-LYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQNG 121
VKL E+I+ LYLV E ++ + A R E E +A Q+ + Y HQ
Sbjct: 76 VKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGR--MKEKEARAKFRQIVSAVQYCHQKF 133
Query: 122 FFHRDLKPENLLVSQGI-IKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQSELYSSK 180
HRDLK ENLL+ + IKIADFG + E G + GS Y APE+ + +
Sbjct: 134 IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKKYDGPE 193
Query: 181 ADMWAMGAIMAELFTFCPLFPGAS 204
D+W++G I+ L + F G +
Sbjct: 194 VDVWSLGVILYTLVSGSLPFDGQN 217
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 108 bits (269), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 70/204 (34%), Positives = 103/204 (50%), Gaps = 5/204 (2%)
Query: 4 YSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLNL-REVKCLRKLNHSNI 62
Y K +G+G F +V A TG+ VA++ + + + L REV+ ++ LNH NI
Sbjct: 16 YRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNI 75
Query: 63 VKLKELIQNNNRLYLVFECMECN-LYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQNG 121
VKL E+I+ LYLV E ++ + A R E E +A Q+ + Y HQ
Sbjct: 76 VKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGR--MKEKEARAKFRQIVSAVQYCHQKF 133
Query: 122 FFHRDLKPENLLVSQGI-IKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQSELYSSK 180
HRDLK ENLL+ + IKIADFG + E G + GS Y APE+ + +
Sbjct: 134 IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKKYDGPE 193
Query: 181 ADMWAMGAIMAELFTFCPLFPGAS 204
D+W++G I+ L + F G +
Sbjct: 194 VDVWSLGVILYTLVSGSLPFDGQN 217
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 107 bits (268), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 86/302 (28%), Positives = 142/302 (47%), Gaps = 51/302 (16%)
Query: 4 YSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQ------RYASWEDCLNLR-------- 49
Y ++LG GA+G V +++ AIK +K+ RY+ +D N+
Sbjct: 38 YFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYS--DDNKNIEKFHEEIYN 95
Query: 50 EVKCLRKLNHSNIVKLKELIQNNNRLYLVFECMEC-NLYQLMAARDRKLFSEPEIKAWLF 108
E+ L+ L+H NI+KL ++ ++ YLV E E L++ + R + F E + +
Sbjct: 96 EISLLKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHK--FDECDAANIMK 153
Query: 109 QVFQGLSYMHQNGFFHRDLKPENLLVSQG----IIKIADFGLAREIKSGPPYTNYVGSRW 164
Q+ G+ Y+H++ HRD+KPEN+L+ IKI DFGL+ + +G+ +
Sbjct: 154 QILSGICYLHKHNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYKLRDRLGTAY 213
Query: 165 YRAPEILLQSELYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSW 224
Y APE+L + Y+ K D+W+ G IM L P F G ++ D + K+
Sbjct: 214 YIAPEVLKKK--YNEKCDVWSCGVIMYILLCGYPPFGGQNDQDIIKKV------------ 259
Query: 225 ADGLRQARAIKYQFPQLPRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFF 284
KY F N+ S +A L + + ++D +KR TA EAL +
Sbjct: 260 -------EKGKYYFDFNDWKNI-------SDEAKELIKLMLTYDYNKRCTAEEALNSRWI 305
Query: 285 KR 286
K+
Sbjct: 306 KK 307
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 107 bits (268), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 70/202 (34%), Positives = 101/202 (50%), Gaps = 5/202 (2%)
Query: 4 YSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLNL-REVKCLRKLNHSNI 62
Y K +G+G F +V A TG VAIK + + + L REV+ ++ LNH NI
Sbjct: 14 YRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNI 73
Query: 63 VKLKELIQNNNRLYLVFECMECN-LYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQNG 121
VKL E+I+ LYL+ E ++ + A R E E ++ Q+ + Y HQ
Sbjct: 74 VKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGR--MKEKEARSKFRQIVSAVQYCHQKR 131
Query: 122 FFHRDLKPENLLVSQGI-IKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQSELYSSK 180
HRDLK ENLL+ + IKIADFG + E G + GS Y APE+ + +
Sbjct: 132 IVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDTFCGSPPYAAPELFQGKKYDGPE 191
Query: 181 ADMWAMGAIMAELFTFCPLFPG 202
D+W++G I+ L + F G
Sbjct: 192 VDVWSLGVILYTLVSGSLPFDG 213
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 107 bits (268), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 83/291 (28%), Positives = 136/291 (46%), Gaps = 37/291 (12%)
Query: 5 SGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLNLREVKCLRKLNHSNIVK 64
+ F ++G G+ G V A ++HTG+ VA+K++ R + L EV +R +H N+V
Sbjct: 48 ANFIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELL-FNEVVIMRDYHHDNVVD 106
Query: 65 LKELIQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQNGFFH 124
+ + L++V E +E + R +E +I V + LSY+H G H
Sbjct: 107 MYSSYLVGDELWVVMEFLEGGALTDIVTHTR--MNEEQIATVCLSVLRALSYLHNQGVIH 164
Query: 125 RDLKPEN-LLVSQGIIKIADFGLAREI-KSGPPYTNYVGSRWYRAPEILLQSEL-YSSKA 181
RD+K ++ LL S G IK++DFG ++ K P VG+ ++ APE++ S L Y ++
Sbjct: 165 RDIKSDSILLTSDGRIKLSDFGFCAQVSKEVPKRKXLVGTPYWMAPEVI--SRLPYGTEV 222
Query: 182 DMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQARAIKYQFPQL 241
D+W++G ++ E+ P + P L+ R I+ P
Sbjct: 223 DIWSLGIMVIEMIDGEPPY---------------FNEPP-------LQAMRRIRDSLP-- 258
Query: 242 PRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFFKRCFYAPP 292
PR + S + + L + +PS+R TA E L HPF K PP
Sbjct: 259 PRVKDLHKVSSVLRGFLDL---MLVREPSQRATAQELLGHPFLK--LAGPP 304
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 107 bits (268), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 70/200 (35%), Positives = 101/200 (50%), Gaps = 5/200 (2%)
Query: 8 KELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLNL-REVKCLRKLNHSNIVKLK 66
K +G+G F +V A TG VA+K + + + L REV+ ++ LNH NIVKL
Sbjct: 21 KTIGKGNFAKVKLARHVLTGREVAVKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLF 80
Query: 67 ELIQNNNRLYLVFECMECN-LYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQNGFFHR 125
E+I+ LYLV E ++ + A R E E +A Q+ + Y HQ HR
Sbjct: 81 EVIETEKTLYLVMEYASGGEVFDYLVAHGR--MKEKEARAKFRQIVSAVQYCHQKYIVHR 138
Query: 126 DLKPENLLVSQGI-IKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQSELYSSKADMW 184
DLK ENLL+ + IKIADFG + E G + GS Y APE+ + + D+W
Sbjct: 139 DLKAENLLLDGDMNIKIADFGFSNEFTVGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVW 198
Query: 185 AMGAIMAELFTFCPLFPGAS 204
++G I+ L + F G +
Sbjct: 199 SLGVILYTLVSGSLPFDGQN 218
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 70/204 (34%), Positives = 103/204 (50%), Gaps = 5/204 (2%)
Query: 4 YSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLNL-REVKCLRKLNHSNI 62
Y K +G+G F +V A TG+ VA++ + + + L REV+ ++ LNH NI
Sbjct: 16 YRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNI 75
Query: 63 VKLKELIQNNNRLYLVFECMECN-LYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQNG 121
VKL E+I+ LYLV E ++ + A R E E +A Q+ + Y HQ
Sbjct: 76 VKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGR--MKEKEARAKFRQIVSAVQYCHQKF 133
Query: 122 FFHRDLKPENLLVSQGI-IKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQSELYSSK 180
HRDLK ENLL+ + IKIADFG + E G + GS Y APE+ + +
Sbjct: 134 IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDEFCGSPPYAAPELFQGKKYDGPE 193
Query: 181 ADMWAMGAIMAELFTFCPLFPGAS 204
D+W++G I+ L + F G +
Sbjct: 194 VDVWSLGVILYTLVSGSLPFDGQN 217
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 85/293 (29%), Positives = 135/293 (46%), Gaps = 38/293 (12%)
Query: 4 YSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLNLREVKCLRKLNHSNIV 63
Y + +G G F +V A TGE VAIK + + + E++ L+ L H +I
Sbjct: 12 YELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHIC 71
Query: 64 KLKELIQNNNRLYLVFE-CMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQNGF 122
+L +++ N++++V E C L+ + ++DR SE E + Q+ ++Y+H G+
Sbjct: 72 QLYHVLETANKIFMVLEYCPGGELFDYIISQDR--LSEEETRVVFRQIVSAVAYVHSQGY 129
Query: 123 FHRDLKPENLLVSQ-GIIKIADFGLAREIKSGPPY--TNYVGSRWYRAPEILLQSELYSS 179
HRDLKPENLL + +K+ DFGL + K Y GS Y APE++ S
Sbjct: 130 AHRDLKPENLLFDEYHKLKLIDFGLCAKPKGNKDYHLQTCCGSLAYAAPELIQGKSYLGS 189
Query: 180 KADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGL-RQARAIKYQF 238
+AD+W+MG ++ L +CG L P D L ++ KY
Sbjct: 190 EADVWSMGILLYVL------------------MCGFL--PFDDDNVMALYKKIMRGKYDV 229
Query: 239 PQLPRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFFKRCFYAP 291
P+ L PS +I L + + DP KR + L HP+ + + P
Sbjct: 230 PKW-------LSPS----SILLLQQMLQVDPKKRISMKNLLNHPWIMQDYNYP 271
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 70/202 (34%), Positives = 102/202 (50%), Gaps = 5/202 (2%)
Query: 4 YSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLNL-REVKCLRKLNHSNI 62
Y K +G+G F +V A TG+ VA+K + + + L REV+ ++ LNH NI
Sbjct: 16 YRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNI 75
Query: 63 VKLKELIQNNNRLYLVFECMECN-LYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQNG 121
VKL E+I+ LYLV E ++ + A R E E +A Q+ + Y HQ
Sbjct: 76 VKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGR--MKEKEARAKFRQIVSAVQYCHQKF 133
Query: 122 FFHRDLKPENLLVSQGI-IKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQSELYSSK 180
HRDLK ENLL+ + IKIADFG + E G + G+ Y APE+ + +
Sbjct: 134 IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDAFCGAPPYAAPELFQGKKYDGPE 193
Query: 181 ADMWAMGAIMAELFTFCPLFPG 202
D+W++G I+ L + F G
Sbjct: 194 VDVWSLGVILYTLVSGSLPFDG 215
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 83/289 (28%), Positives = 134/289 (46%), Gaps = 45/289 (15%)
Query: 10 LGRGAFGRVFQA---FDEHTGEAVAIKELKQRYA--SWEDCLNLR-EVKCLRKLNHSNIV 63
LG+G +G+VFQ +TG+ A+K LK+ + +D + + E L ++ H IV
Sbjct: 25 LGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIV 84
Query: 64 KLKELIQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQNGFF 123
L Q +LYL+ E + + R+ +F E +L ++ L ++HQ G
Sbjct: 85 DLIYAFQTGGKLYLILEYLSGGELFMQLERE-GIFMEDTACFYLAEISMALGHLHQKGII 143
Query: 124 HRDLKPENLLVS-QGIIKIADFGLARE-IKSGPPYTNYVGSRWYRAPEILLQSELYSSKA 181
+RDLKPEN++++ QG +K+ DFGL +E I G + G+ Y APEIL++S ++
Sbjct: 144 YRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHTFCGTIEYMAPEILMRSG-HNRAV 202
Query: 182 DMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQARAIKYQFPQL 241
D W++GA+M ++ T P F G + + KI K P
Sbjct: 203 DWWSLGALMYDMLTGAPPFTGENRKKTIDKIL-------------------KCKLNLP-- 241
Query: 242 PRANLSALMPSASQDAISLFESLCSWDPSKR-----PTAAEALQHPFFK 285
P +Q+A L + L + + R A E HPFF+
Sbjct: 242 ---------PYLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQAHPFFR 281
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 85/280 (30%), Positives = 128/280 (45%), Gaps = 36/280 (12%)
Query: 10 LGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLNLREVKCLRKLNHSNIVKLKELI 69
LG GAF VF TG+ A+K +K+ A + L E+ L+K+ H NIV L+++
Sbjct: 17 LGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLE-NEIAVLKKIKHENIVTLEDIY 75
Query: 70 QNNNRLYLVFECMEC-NLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQNGFFHRDLK 128
++ YLV + + L+ + +R +++E + + QV + Y+H+NG HRDLK
Sbjct: 76 ESTTHYYLVMQLVSGGELFDRIL--ERGVYTEKDASLVIQQVLSAVKYLHENGIVHRDLK 133
Query: 129 PENLLV----SQGIIKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQSELYSSKADMW 184
PENLL I I DFGL++ ++G T G+ Y APE+L Q YS D W
Sbjct: 134 PENLLYLTPEENSKIMITDFGLSKMEQNGIMSTA-CGTPGYVAPEVLAQKP-YSKAVDCW 191
Query: 185 AMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQARAIKYQFPQLPRA 244
++G I L P F +E+ KI + Y+F
Sbjct: 192 SIGVITYILLCGYPPFYEETESKLFEKI-------------------KEGYYEFE----- 227
Query: 245 NLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFF 284
S S+ A L DP++R T +AL HP+
Sbjct: 228 --SPFWDDISESAKDFICHLLEKDPNERYTCEKALSHPWI 265
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 83/289 (28%), Positives = 134/289 (46%), Gaps = 45/289 (15%)
Query: 10 LGRGAFGRVFQA---FDEHTGEAVAIKELKQRYA--SWEDCLNLR-EVKCLRKLNHSNIV 63
LG+G +G+VFQ +TG+ A+K LK+ + +D + + E L ++ H IV
Sbjct: 25 LGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIV 84
Query: 64 KLKELIQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQNGFF 123
L Q +LYL+ E + + R+ +F E +L ++ L ++HQ G
Sbjct: 85 DLIYAFQTGGKLYLILEYLSGGELFMQLERE-GIFMEDTACFYLAEISMALGHLHQKGII 143
Query: 124 HRDLKPENLLVS-QGIIKIADFGLARE-IKSGPPYTNYVGSRWYRAPEILLQSELYSSKA 181
+RDLKPEN++++ QG +K+ DFGL +E I G + G+ Y APEIL++S ++
Sbjct: 144 YRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHXFCGTIEYMAPEILMRSG-HNRAV 202
Query: 182 DMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQARAIKYQFPQL 241
D W++GA+M ++ T P F G + + KI K P
Sbjct: 203 DWWSLGALMYDMLTGAPPFTGENRKKTIDKIL-------------------KCKLNLP-- 241
Query: 242 PRANLSALMPSASQDAISLFESLCSWDPSKR-----PTAAEALQHPFFK 285
P +Q+A L + L + + R A E HPFF+
Sbjct: 242 ---------PYLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQAHPFFR 281
>pdb|3NR9|A Chain A, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|B Chain B, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|C Chain C, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
Length = 368
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 86/336 (25%), Positives = 146/336 (43%), Gaps = 54/336 (16%)
Query: 2 DKYSGFKELGRGAFGRVFQAFDEHTGEA-VAIKELKQRYASWEDCLNLREVKCLRKLNHS 60
++Y LG G FGRV Q D G A VA+K +K +++ L E+ L K+N
Sbjct: 33 ERYEIVSTLGEGTFGRVVQCVDHRRGGARVALKIIKN-VEKYKEAARL-EINVLEKINEK 90
Query: 61 N------IVKLKELIQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGL 114
+ V++ + + + + FE + + + + + + +++ FQ+ Q +
Sbjct: 91 DPDNKNLCVQMFDWFDYHGHMCISFELLGLSTFDFLKDNNYLPYPIHQVRHMAFQLCQAV 150
Query: 115 SYMHQNGFFHRDLKPENLL--------------------VSQGIIKIADFGLAREIKSGP 154
++H N H DLKPEN+L V +++ DFG A
Sbjct: 151 KFLHDNKLTHTDLKPENILFVNSDYELTYNLEKKRDERSVKSTAVRVVDFGSA--TFDHE 208
Query: 155 PYTNYVGSRWYRAPEILLQSELYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICG 214
++ V +R YRAPE++L+ +S D+W++G I+ E + LF + + +
Sbjct: 209 HHSTIVSTRHYRAPEVILELG-WSQPCDVWSIGCIIFEYYVGFTLFQTHDNREHLAMMER 267
Query: 215 VLGSPTMDSWADGLRQARAIKYQFP------------QLPRANLSALMPSASQDA----- 257
+LG + +R+ R KY + + R N L + +A
Sbjct: 268 ILGPIP----SRMIRKTRKQKYFYRGRLDWDENTSAGRYVRENCKPLRRYLTSEAEEHHQ 323
Query: 258 -ISLFESLCSWDPSKRPTAAEALQHPFFKRCFYAPP 292
L ES+ ++P+KR T EALQHPFF R PP
Sbjct: 324 LFDLIESMLEYEPAKRLTLGEALQHPFFARLRAEPP 359
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 105 bits (263), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 91/298 (30%), Positives = 140/298 (46%), Gaps = 36/298 (12%)
Query: 10 LGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLNLREVKCLRKL-NHSNIVKLKEL 68
LG GA RV + T + A+K ++++ + REV+ L + H N+++L E
Sbjct: 21 LGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRV-FREVEMLYQCQGHRNVLELIEF 79
Query: 69 IQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQNGFFHRDLK 128
+ +R YLVFE M L R+ F+E E + V L ++H G HRDLK
Sbjct: 80 FEEEDRFYLVFEKMRGGSI-LSHIHKRRHFNELEASVVVQDVASALDFLHNKGIAHRDLK 138
Query: 129 PENLLVSQ----GIIKIADFGLAREIK--------SGPPYTNYVGSRWYRAPEIL----L 172
PEN+L +KI DFGL IK S P GS Y APE++
Sbjct: 139 PENILCEHPNQVSPVKICDFGLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSE 198
Query: 173 QSELYSSKADMWAMGAIMAELFTFCPLFPGASEADQMY---KICGVLGSPTMDSWADGLR 229
++ +Y + D+W++G I+ L + P F G +D + + C + +S +G
Sbjct: 199 EASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQNMLFESIQEG-- 256
Query: 230 QARAIKYQFPQLPRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFFKRC 287
KY+FP A++S A++D IS L D +R +AA+ LQHP+ + C
Sbjct: 257 -----KYEFPDKDWAHISC----AAKDLIS---KLLVRDAKQRLSAAQVLQHPWVQGC 302
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 105 bits (263), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 69/202 (34%), Positives = 101/202 (50%), Gaps = 5/202 (2%)
Query: 4 YSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLNL-REVKCLRKLNHSNI 62
Y K +G+G F +V A TG VAIK + + + L REV+ ++ LNH NI
Sbjct: 17 YRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNI 76
Query: 63 VKLKELIQNNNRLYLVFECMECN-LYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQNG 121
VKL E+I+ LYL+ E ++ + A R E E ++ Q+ + Y HQ
Sbjct: 77 VKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGR--MKEKEARSKFRQIVSAVQYCHQKR 134
Query: 122 FFHRDLKPENLLVSQGI-IKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQSELYSSK 180
HRDLK ENLL+ + IKIADFG + E G + G+ Y APE+ + +
Sbjct: 135 IVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDAFCGAPPYAAPELFQGKKYDGPE 194
Query: 181 ADMWAMGAIMAELFTFCPLFPG 202
D+W++G I+ L + F G
Sbjct: 195 VDVWSLGVILYTLVSGSLPFDG 216
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 105 bits (262), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 84/292 (28%), Positives = 135/292 (46%), Gaps = 39/292 (13%)
Query: 10 LGRGAFGRVFQAFDEHTGEAVAIKELKQ-RYASWEDCLNLREVKCLRKLNHSNIVKLKEL 68
LG G G+V Q F++ T E A+K L+ A E L+ R +C +IV++ ++
Sbjct: 76 LGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQC------PHIVRIVDV 129
Query: 69 IQN----NNRLYLVFECMEC-NLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQNGFF 123
+N L +V EC++ L+ + R + F+E E + + + + Y+H
Sbjct: 130 YENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIA 189
Query: 124 HRDLKPENLLVS----QGIIKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQSELYSS 179
HRD+KPENLL + I+K+ DFG A+E S T + +Y APE+ L E Y
Sbjct: 190 HRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEV-LGPEKYDK 248
Query: 180 KADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQARAIKYQFP 239
DMW++G IM L P F Y G+ SP M + + R +Y+FP
Sbjct: 249 SCDMWSLGVIMYILLCGYPPF---------YSNHGLAISPGMKT------RIRMGQYEFP 293
Query: 240 QLPRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFFKRCFYAP 291
+ + S++ L +L +P++R T E + HP+ + P
Sbjct: 294 NPEWSEV-------SEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVP 338
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 105 bits (262), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 70/204 (34%), Positives = 102/204 (50%), Gaps = 5/204 (2%)
Query: 4 YSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLNL-REVKCLRKLNHSNI 62
Y K +G+G F +V A TG+ VA+K + + + L REV+ ++ LNH NI
Sbjct: 9 YRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNI 68
Query: 63 VKLKELIQNNNRLYLVFECMECN-LYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQNG 121
VKL E+I+ LYLV E ++ + A E E +A Q+ + Y HQ
Sbjct: 69 VKLFEVIETEKTLYLVMEYASGGEVFDYLVAHG--WMKEKEARAKFRQIVSAVQYCHQKF 126
Query: 122 FFHRDLKPENLLVSQGI-IKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQSELYSSK 180
HRDLK ENLL+ + IKIADFG + E G + GS Y APE+ + +
Sbjct: 127 IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKKYDGPE 186
Query: 181 ADMWAMGAIMAELFTFCPLFPGAS 204
D+W++G I+ L + F G +
Sbjct: 187 VDVWSLGVILYTLVSGSLPFDGQN 210
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 105 bits (261), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 80/286 (27%), Positives = 136/286 (47%), Gaps = 36/286 (12%)
Query: 4 YSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLNLREVKCLRKLNHSNIV 63
++ + +G+G+FG VF+ D T + VAIK + A E +E+ L + + S +
Sbjct: 25 FTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSSYVT 84
Query: 64 KLKELIQNNNRLYLVFECMEC-NLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQNGF 122
K ++L+++ E + + L+ A F E +I L ++ +GL Y+H
Sbjct: 85 KYYGSYLKGSKLWIIMEYLGGGSALDLLRAGP---FDEFQIATMLKEILKGLDYLHSEKK 141
Query: 123 FHRDLKPENLLVS-QGIIKIADFGLAREIKSGPPYTN-YVGSRWYRAPEILLQSELYSSK 180
HRD+K N+L+S QG +K+ADFG+A ++ N +VG+ ++ APE++ QS Y SK
Sbjct: 142 IHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIQQSA-YDSK 200
Query: 181 ADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQARAIKYQFPQ 240
AD+W++G EL P P D + R +
Sbjct: 201 ADIWSLGITAIELAKGEP--------------------PNSD-----MHPMRVLFL---- 231
Query: 241 LPRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFFKR 286
+P+ N L+ ++ ++ + DPS RPTA E L+H F +
Sbjct: 232 IPKNNPPTLVGDFTKSFKEFIDACLNKDPSFRPTAKELLKHKFIVK 277
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 105 bits (261), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 84/292 (28%), Positives = 135/292 (46%), Gaps = 39/292 (13%)
Query: 10 LGRGAFGRVFQAFDEHTGEAVAIKELKQ-RYASWEDCLNLREVKCLRKLNHSNIVKLKEL 68
LG G G+V Q F++ T E A+K L+ A E L+ R +C +IV++ ++
Sbjct: 40 LGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQC------PHIVRIVDV 93
Query: 69 IQN----NNRLYLVFECMECN-LYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQNGFF 123
+N L +V EC++ L+ + R + F+E E + + + + Y+H
Sbjct: 94 YENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIA 153
Query: 124 HRDLKPENLLVS----QGIIKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQSELYSS 179
HRD+KPENLL + I+K+ DFG A+E S T + +Y APE+ L E Y
Sbjct: 154 HRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEV-LGPEKYDK 212
Query: 180 KADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQARAIKYQFP 239
DMW++G IM L P F Y G+ SP M + + R +Y+FP
Sbjct: 213 SCDMWSLGVIMYILLCGYPPF---------YSNHGLAISPGMKT------RIRMGQYEFP 257
Query: 240 QLPRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFFKRCFYAP 291
+ + S++ L +L +P++R T E + HP+ + P
Sbjct: 258 NPEWSEV-------SEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVP 302
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 105 bits (261), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 84/292 (28%), Positives = 135/292 (46%), Gaps = 39/292 (13%)
Query: 10 LGRGAFGRVFQAFDEHTGEAVAIKELKQ-RYASWEDCLNLREVKCLRKLNHSNIVKLKEL 68
LG G G+V Q F++ T E A+K L+ A E L+ R +C +IV++ ++
Sbjct: 70 LGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQC------PHIVRIVDV 123
Query: 69 IQN----NNRLYLVFECMEC-NLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQNGFF 123
+N L +V EC++ L+ + R + F+E E + + + + Y+H
Sbjct: 124 YENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIA 183
Query: 124 HRDLKPENLLVS----QGIIKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQSELYSS 179
HRD+KPENLL + I+K+ DFG A+E S T + +Y APE+ L E Y
Sbjct: 184 HRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEV-LGPEKYDK 242
Query: 180 KADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQARAIKYQFP 239
DMW++G IM L P F Y G+ SP M + + R +Y+FP
Sbjct: 243 SCDMWSLGVIMYILLCGYPPF---------YSNHGLAISPGMKT------RIRMGQYEFP 287
Query: 240 QLPRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFFKRCFYAP 291
+ + S++ L +L +P++R T E + HP+ + P
Sbjct: 288 NPEWSEV-------SEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVP 332
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 105 bits (261), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 84/292 (28%), Positives = 135/292 (46%), Gaps = 39/292 (13%)
Query: 10 LGRGAFGRVFQAFDEHTGEAVAIKELKQ-RYASWEDCLNLREVKCLRKLNHSNIVKLKEL 68
LG G G+V Q F++ T E A+K L+ A E L+ R +C +IV++ ++
Sbjct: 24 LGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQC------PHIVRIVDV 77
Query: 69 IQN----NNRLYLVFECMEC-NLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQNGFF 123
+N L +V EC++ L+ + R + F+E E + + + + Y+H
Sbjct: 78 YENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIA 137
Query: 124 HRDLKPENLLVS----QGIIKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQSELYSS 179
HRD+KPENLL + I+K+ DFG A+E S T + +Y APE+ L E Y
Sbjct: 138 HRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEV-LGPEKYDK 196
Query: 180 KADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQARAIKYQFP 239
DMW++G IM L P F Y G+ SP M + + R +Y+FP
Sbjct: 197 SCDMWSLGVIMYILLCGYPPF---------YSNHGLAISPGMKT------RIRMGQYEFP 241
Query: 240 QLPRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFFKRCFYAP 291
+ + S++ L +L +P++R T E + HP+ + P
Sbjct: 242 NPEWSEV-------SEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVP 286
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 105 bits (261), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 84/292 (28%), Positives = 135/292 (46%), Gaps = 39/292 (13%)
Query: 10 LGRGAFGRVFQAFDEHTGEAVAIKELKQ-RYASWEDCLNLREVKCLRKLNHSNIVKLKEL 68
LG G G+V Q F++ T E A+K L+ A E L+ R +C +IV++ ++
Sbjct: 26 LGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQC------PHIVRIVDV 79
Query: 69 IQN----NNRLYLVFECMEC-NLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQNGFF 123
+N L +V EC++ L+ + R + F+E E + + + + Y+H
Sbjct: 80 YENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIA 139
Query: 124 HRDLKPENLLVS----QGIIKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQSELYSS 179
HRD+KPENLL + I+K+ DFG A+E S T + +Y APE+ L E Y
Sbjct: 140 HRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEV-LGPEKYDK 198
Query: 180 KADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQARAIKYQFP 239
DMW++G IM L P F Y G+ SP M + + R +Y+FP
Sbjct: 199 SCDMWSLGVIMYILLCGYPPF---------YSNHGLAISPGMKT------RIRMGQYEFP 243
Query: 240 QLPRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFFKRCFYAP 291
+ + S++ L +L +P++R T E + HP+ + P
Sbjct: 244 NPEWSEV-------SEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVP 288
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 104 bits (260), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 84/292 (28%), Positives = 135/292 (46%), Gaps = 39/292 (13%)
Query: 10 LGRGAFGRVFQAFDEHTGEAVAIKELKQ-RYASWEDCLNLREVKCLRKLNHSNIVKLKEL 68
LG G G+V Q F++ T E A+K L+ A E L+ R +C +IV++ ++
Sbjct: 25 LGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQC------PHIVRIVDV 78
Query: 69 IQN----NNRLYLVFECMEC-NLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQNGFF 123
+N L +V EC++ L+ + R + F+E E + + + + Y+H
Sbjct: 79 YENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIA 138
Query: 124 HRDLKPENLLVS----QGIIKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQSELYSS 179
HRD+KPENLL + I+K+ DFG A+E S T + +Y APE+ L E Y
Sbjct: 139 HRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEV-LGPEKYDK 197
Query: 180 KADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQARAIKYQFP 239
DMW++G IM L P F Y G+ SP M + + R +Y+FP
Sbjct: 198 SCDMWSLGVIMYILLCGYPPF---------YSNHGLAISPGMKT------RIRMGQYEFP 242
Query: 240 QLPRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFFKRCFYAP 291
+ + S++ L +L +P++R T E + HP+ + P
Sbjct: 243 NPEWSEV-------SEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVP 287
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 104 bits (260), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 84/292 (28%), Positives = 135/292 (46%), Gaps = 39/292 (13%)
Query: 10 LGRGAFGRVFQAFDEHTGEAVAIKELKQ-RYASWEDCLNLREVKCLRKLNHSNIVKLKEL 68
LG G G+V Q F++ T E A+K L+ A E L+ R +C +IV++ ++
Sbjct: 24 LGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQC------PHIVRIVDV 77
Query: 69 IQN----NNRLYLVFECMEC-NLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQNGFF 123
+N L +V EC++ L+ + R + F+E E + + + + Y+H
Sbjct: 78 YENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIA 137
Query: 124 HRDLKPENLLVS----QGIIKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQSELYSS 179
HRD+KPENLL + I+K+ DFG A+E S T + +Y APE+ L E Y
Sbjct: 138 HRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTEPCYTPYYVAPEV-LGPEKYDK 196
Query: 180 KADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQARAIKYQFP 239
DMW++G IM L P F Y G+ SP M + + R +Y+FP
Sbjct: 197 SCDMWSLGVIMYILLCGYPPF---------YSNHGLAISPGMKT------RIRMGQYEFP 241
Query: 240 QLPRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFFKRCFYAP 291
+ + S++ L +L +P++R T E + HP+ + P
Sbjct: 242 NPEWSEV-------SEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVP 286
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 104 bits (260), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 84/292 (28%), Positives = 135/292 (46%), Gaps = 39/292 (13%)
Query: 10 LGRGAFGRVFQAFDEHTGEAVAIKELKQ-RYASWEDCLNLREVKCLRKLNHSNIVKLKEL 68
LG G G+V Q F++ T E A+K L+ A E L+ R +C +IV++ ++
Sbjct: 30 LGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQC------PHIVRIVDV 83
Query: 69 IQN----NNRLYLVFECMEC-NLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQNGFF 123
+N L +V EC++ L+ + R + F+E E + + + + Y+H
Sbjct: 84 YENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIA 143
Query: 124 HRDLKPENLLVS----QGIIKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQSELYSS 179
HRD+KPENLL + I+K+ DFG A+E S T + +Y APE+ L E Y
Sbjct: 144 HRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEV-LGPEKYDK 202
Query: 180 KADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQARAIKYQFP 239
DMW++G IM L P F Y G+ SP M + + R +Y+FP
Sbjct: 203 SCDMWSLGVIMYILLCGYPPF---------YSNHGLAISPGMKT------RIRMGQYEFP 247
Query: 240 QLPRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFFKRCFYAP 291
+ + S++ L +L +P++R T E + HP+ + P
Sbjct: 248 NPEWSEV-------SEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVP 292
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 104 bits (260), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 84/292 (28%), Positives = 135/292 (46%), Gaps = 39/292 (13%)
Query: 10 LGRGAFGRVFQAFDEHTGEAVAIKELKQ-RYASWEDCLNLREVKCLRKLNHSNIVKLKEL 68
LG G G+V Q F++ T E A+K L+ A E L+ R +C +IV++ ++
Sbjct: 32 LGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQC------PHIVRIVDV 85
Query: 69 IQN----NNRLYLVFECMEC-NLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQNGFF 123
+N L +V EC++ L+ + R + F+E E + + + + Y+H
Sbjct: 86 YENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIA 145
Query: 124 HRDLKPENLLVS----QGIIKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQSELYSS 179
HRD+KPENLL + I+K+ DFG A+E S T + +Y APE+ L E Y
Sbjct: 146 HRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEV-LGPEKYDK 204
Query: 180 KADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQARAIKYQFP 239
DMW++G IM L P F Y G+ SP M + + R +Y+FP
Sbjct: 205 SCDMWSLGVIMYILLCGYPPF---------YSNHGLAISPGMKT------RIRMGQYEFP 249
Query: 240 QLPRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFFKRCFYAP 291
+ + S++ L +L +P++R T E + HP+ + P
Sbjct: 250 NPEWSEV-------SEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVP 294
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 104 bits (260), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 84/292 (28%), Positives = 135/292 (46%), Gaps = 39/292 (13%)
Query: 10 LGRGAFGRVFQAFDEHTGEAVAIKELKQ-RYASWEDCLNLREVKCLRKLNHSNIVKLKEL 68
LG G G+V Q F++ T E A+K L+ A E L+ R +C +IV++ ++
Sbjct: 31 LGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQC------PHIVRIVDV 84
Query: 69 IQN----NNRLYLVFECMEC-NLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQNGFF 123
+N L +V EC++ L+ + R + F+E E + + + + Y+H
Sbjct: 85 YENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIA 144
Query: 124 HRDLKPENLLVS----QGIIKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQSELYSS 179
HRD+KPENLL + I+K+ DFG A+E S T + +Y APE+ L E Y
Sbjct: 145 HRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEV-LGPEKYDK 203
Query: 180 KADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQARAIKYQFP 239
DMW++G IM L P F Y G+ SP M + + R +Y+FP
Sbjct: 204 SCDMWSLGVIMYILLCGYPPF---------YSNHGLAISPGMKT------RIRMGQYEFP 248
Query: 240 QLPRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFFKRCFYAP 291
+ + S++ L +L +P++R T E + HP+ + P
Sbjct: 249 NPEWSEV-------SEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVP 293
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 104 bits (260), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 84/292 (28%), Positives = 135/292 (46%), Gaps = 39/292 (13%)
Query: 10 LGRGAFGRVFQAFDEHTGEAVAIKELKQ-RYASWEDCLNLREVKCLRKLNHSNIVKLKEL 68
LG G G+V Q F++ T E A+K L+ A E L+ R +C +IV++ ++
Sbjct: 26 LGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQC------PHIVRIVDV 79
Query: 69 IQN----NNRLYLVFECMEC-NLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQNGFF 123
+N L +V EC++ L+ + R + F+E E + + + + Y+H
Sbjct: 80 YENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIA 139
Query: 124 HRDLKPENLLVS----QGIIKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQSELYSS 179
HRD+KPENLL + I+K+ DFG A+E S T + +Y APE+ L E Y
Sbjct: 140 HRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEV-LGPEKYDK 198
Query: 180 KADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQARAIKYQFP 239
DMW++G IM L P F Y G+ SP M + + R +Y+FP
Sbjct: 199 SCDMWSLGVIMYILLCGYPPF---------YSNHGLAISPGMKT------RIRMGQYEFP 243
Query: 240 QLPRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFFKRCFYAP 291
+ + S++ L +L +P++R T E + HP+ + P
Sbjct: 244 NPEWSEV-------SEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVP 288
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 104 bits (260), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 72/212 (33%), Positives = 107/212 (50%), Gaps = 24/212 (11%)
Query: 8 KELGRGAFGRVFQAFDEHTGEAVAIKELKQRYA-----SWEDCLNLREVKCLRKLNHSNI 62
+ LG G FG V + + TGE VAIK+ +Q + W CL E++ ++KLNH N+
Sbjct: 20 ERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERW--CL---EIQIMKKLNHPNV 74
Query: 63 VK-------LKELIQNNNRLYLVFECMECNLYQLMAARDRKL-FSEPEIKAWLFQVFQGL 114
V L++L N+ L + C +L + + + E I+ L + L
Sbjct: 75 VSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSAL 134
Query: 115 SYMHQNGFFHRDLKPENLLVSQG----IIKIADFGLAREIKSGPPYTNYVGSRWYRAPEI 170
Y+H+N HRDLKPEN+++ G I KI D G A+E+ G T +VG+ Y APE+
Sbjct: 135 RYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEFVGTLQYLAPEL 194
Query: 171 LLQSELYSSKADMWAMGAIMAELFT-FCPLFP 201
L Q + Y+ D W+ G + E T F P P
Sbjct: 195 LEQKK-YTVTVDYWSFGTLAFECITGFRPFLP 225
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 104 bits (259), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 72/212 (33%), Positives = 107/212 (50%), Gaps = 24/212 (11%)
Query: 8 KELGRGAFGRVFQAFDEHTGEAVAIKELKQRYA-----SWEDCLNLREVKCLRKLNHSNI 62
+ LG G FG V + + TGE VAIK+ +Q + W CL E++ ++KLNH N+
Sbjct: 21 ERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERW--CL---EIQIMKKLNHPNV 75
Query: 63 VK-------LKELIQNNNRLYLVFECMECNLYQLMAARDRKL-FSEPEIKAWLFQVFQGL 114
V L++L N+ L + C +L + + + E I+ L + L
Sbjct: 76 VSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSAL 135
Query: 115 SYMHQNGFFHRDLKPENLLVSQG----IIKIADFGLAREIKSGPPYTNYVGSRWYRAPEI 170
Y+H+N HRDLKPEN+++ G I KI D G A+E+ G T +VG+ Y APE+
Sbjct: 136 RYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEFVGTLQYLAPEL 195
Query: 171 LLQSELYSSKADMWAMGAIMAELFT-FCPLFP 201
L Q + Y+ D W+ G + E T F P P
Sbjct: 196 LEQKK-YTVTVDYWSFGTLAFECITGFRPFLP 226
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 83/296 (28%), Positives = 137/296 (46%), Gaps = 40/296 (13%)
Query: 2 DKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLNL----REVKCLRKL 57
D Y + +G+GAF V + + TG+ A+K + + L+ RE L
Sbjct: 24 DVYELCEVIGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHML 83
Query: 58 NHSNIVKLKELIQNNNRLYLVFECMECN--LYQLMAARDRK-LFSEPEIKAWLFQVFQGL 114
H +IV+L E ++ LY+VFE M+ ++++ D ++SE ++ Q+ + L
Sbjct: 84 KHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEAL 143
Query: 115 SYMHQNGFFHRDLKPENLLVSQ----GIIKIADFGLAREI-KSGPPYTNYVGSRWYRAPE 169
Y H N HRD+KPEN+L++ +K+ DFG+A ++ +SG VG+ + APE
Sbjct: 144 RYCHDNNIIHRDVKPENVLLASKENSAPVKLGDFGVAIQLGESGLVAGGRVGTPHFMAPE 203
Query: 170 ILLQSELYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLR 229
++ + E Y D+W G I+ L + C F G T + +G+
Sbjct: 204 VV-KREPYGKPVDVWGCGVILFILLSGCLPFYG-----------------TKERLFEGI- 244
Query: 230 QARAIKYQFPQLPRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFFK 285
IK ++ PR S+ A L + DP++R T EAL HP+ K
Sbjct: 245 ----IKGKYKMNPRQ-----WSHISESAKDLVRRMLMLDPAERITVYEALNHPWLK 291
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 81/271 (29%), Positives = 135/271 (49%), Gaps = 17/271 (6%)
Query: 7 FKELGRGAFGRVF---QAFDEHTGEAVAIKELKQRYASWEDCLNLR-EVKCLRKLNHSNI 62
K LG+G+FG+VF + +G A+K LK+ D + + E L +NH +
Sbjct: 33 LKVLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRVRTKMERDILADVNHPFV 92
Query: 63 VKLKELIQNNNRLYLVFECMEC-NLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQNG 121
VKL Q +LYL+ + + +L+ ++ +F+E ++K +L ++ GL ++H G
Sbjct: 93 VKLHYAFQTEGKLYLILDFLRGGDLFTRLSKE--VMFTEEDVKFYLAELALGLDHLHSLG 150
Query: 122 FFHRDLKPENLLVS-QGIIKIADFGLARE-IKSGPPYTNYVGSRWYRAPEILLQSELYSS 179
+RDLKPEN+L+ +G IK+ DFGL++E I ++ G+ Y APE+ + + +S
Sbjct: 151 IIYRDLKPENILLDEEGHIKLTDFGLSKEAIDHEKKAYSFCGTVEYMAPEV-VNRQGHSH 209
Query: 180 KADMWAMGAIMAELFTFCPLFPGASEADQMYKICGV-LGSPT-MDSWADGLRQARAIKYQ 237
AD W+ G +M E+ T F G + M I LG P + + A L +A
Sbjct: 210 SADWWSYGVLMFEMLTGSLPFQGKDRKETMTLILKAKLGMPQFLSTEAQSLLRA-----L 264
Query: 238 FPQLPRANLSALMPSASQDAISLFESLCSWD 268
F + P L + A + +F S W+
Sbjct: 265 FKRNPANRLGSGPDGAEEIKRHVFYSTIDWN 295
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 70/202 (34%), Positives = 100/202 (49%), Gaps = 5/202 (2%)
Query: 4 YSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLNL-REVKCLRKLNHSNI 62
Y K +G+G F +V A TG+ VA+K + + + L REV+ + LNH NI
Sbjct: 16 YRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIXKVLNHPNI 75
Query: 63 VKLKELIQNNNRLYLVFECMECN-LYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQNG 121
VKL E+I+ LYLV E ++ + A R E E +A Q+ + Y HQ
Sbjct: 76 VKLFEVIETEKTLYLVXEYASGGEVFDYLVAHGRX--KEKEARAKFRQIVSAVQYCHQKF 133
Query: 122 FFHRDLKPENLLVSQGI-IKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQSELYSSK 180
HRDLK ENLL+ IKIADFG + E G + G+ Y APE+ + +
Sbjct: 134 IVHRDLKAENLLLDADXNIKIADFGFSNEFTFGNKLDAFCGAPPYAAPELFQGKKYDGPE 193
Query: 181 ADMWAMGAIMAELFTFCPLFPG 202
D+W++G I+ L + F G
Sbjct: 194 VDVWSLGVILYTLVSGSLPFDG 215
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 80/289 (27%), Positives = 133/289 (46%), Gaps = 37/289 (12%)
Query: 7 FKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLNLREVKCLRKLNHSNIVKLK 66
F ++G G+ G V A +G+ VA+K++ R + L EV +R H N+V++
Sbjct: 29 FIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELL-FNEVVIMRDYQHENVVEMY 87
Query: 67 ELIQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQNGFFHRD 126
+ L++V E +E + R +E +I A V Q LS +H G HRD
Sbjct: 88 NSYLVGDELWVVMEFLEGGALTDIVTHTR--MNEEQIAAVCLAVLQALSVLHAQGVIHRD 145
Query: 127 LKPENLLVSQ-GIIKIADFGLAREI-KSGPPYTNYVGSRWYRAPEILLQSELYSSKADMW 184
+K +++L++ G +K++DFG ++ K P VG+ ++ APE L+ Y + D+W
Sbjct: 146 IKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPE-LISRLPYGPEVDIW 204
Query: 185 AMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQARAIKYQFPQLPR- 243
++G ++ E+ P + P L+ + I+ P PR
Sbjct: 205 SLGIMVIEMVDGEPPY---------------FNEPP-------LKAMKMIRDNLP--PRL 240
Query: 244 ANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFFKRCFYAPP 292
NL + PS + L DP++R TAAE L+HPF + PP
Sbjct: 241 KNLHKVSPSLK----GFLDRLLVRDPAQRATAAELLKHPFLAKA--GPP 283
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 78/227 (34%), Positives = 123/227 (54%), Gaps = 14/227 (6%)
Query: 1 MDKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKEL-KQRYASWEDCLN-LREVKCLRKLN 58
+D++ K +G G+FGRV TG A+K L KQ+ + + L E + L+ +N
Sbjct: 40 LDQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 59 HSNIVKLKELIQNNNRLYLVFECMECNLYQLMAARDRKL--FSEPEIKAWLFQVFQGLSY 116
+VKL+ ++N+ LY+V E M M + R++ FSEP + + Q+ Y
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYMPGGD---MFSHLRRIGRFSEPHARFYAAQIVLTFEY 156
Query: 117 MHQNGFFHRDLKPENLLVS-QGIIKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQSE 175
+H +RDLKPENLL+ QG IK+ADFG A+ +K G + G+ Y APEI+L S+
Sbjct: 157 LHSLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVK-GRTWX-LCGTPEYLAPEIIL-SK 213
Query: 176 LYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYK--ICGVLGSPT 220
Y+ D WA+G ++ E+ P F A + Q+Y+ + G + P+
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYPPF-FADQPIQIYEKIVSGKVRFPS 259
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 80/289 (27%), Positives = 133/289 (46%), Gaps = 37/289 (12%)
Query: 7 FKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLNLREVKCLRKLNHSNIVKLK 66
F ++G G+ G V A +G+ VA+K++ R + L EV +R H N+V++
Sbjct: 25 FIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELL-FNEVVIMRDYQHENVVEMY 83
Query: 67 ELIQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQNGFFHRD 126
+ L++V E +E + R +E +I A V Q LS +H G HRD
Sbjct: 84 NSYLVGDELWVVMEFLEGGALTDIVTHTR--MNEEQIAAVCLAVLQALSVLHAQGVIHRD 141
Query: 127 LKPENLLVSQ-GIIKIADFGLAREI-KSGPPYTNYVGSRWYRAPEILLQSELYSSKADMW 184
+K +++L++ G +K++DFG ++ K P VG+ ++ APE L+ Y + D+W
Sbjct: 142 IKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPE-LISRLPYGPEVDIW 200
Query: 185 AMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQARAIKYQFPQLPR- 243
++G ++ E+ P + P L+ + I+ P PR
Sbjct: 201 SLGIMVIEMVDGEPPY---------------FNEPP-------LKAMKMIRDNLP--PRL 236
Query: 244 ANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFFKRCFYAPP 292
NL + PS + L DP++R TAAE L+HPF + PP
Sbjct: 237 KNLHKVSPSLK----GFLDRLLVRDPAQRATAAELLKHPFLAKA--GPP 279
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 80/289 (27%), Positives = 133/289 (46%), Gaps = 37/289 (12%)
Query: 7 FKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLNLREVKCLRKLNHSNIVKLK 66
F ++G G+ G V A +G+ VA+K++ R + L EV +R H N+V++
Sbjct: 36 FIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELL-FNEVVIMRDYQHENVVEMY 94
Query: 67 ELIQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQNGFFHRD 126
+ L++V E +E + R +E +I A V Q LS +H G HRD
Sbjct: 95 NSYLVGDELWVVMEFLEGGALTDIVTHTR--MNEEQIAAVCLAVLQALSVLHAQGVIHRD 152
Query: 127 LKPENLLVSQ-GIIKIADFGLAREI-KSGPPYTNYVGSRWYRAPEILLQSELYSSKADMW 184
+K +++L++ G +K++DFG ++ K P VG+ ++ APE L+ Y + D+W
Sbjct: 153 IKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPE-LISRLPYGPEVDIW 211
Query: 185 AMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQARAIKYQFPQLPR- 243
++G ++ E+ P + P L+ + I+ P PR
Sbjct: 212 SLGIMVIEMVDGEPPY---------------FNEPP-------LKAMKMIRDNLP--PRL 247
Query: 244 ANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFFKRCFYAPP 292
NL + PS + L DP++R TAAE L+HPF + PP
Sbjct: 248 KNLHKVSPSLK----GFLDRLLVRDPAQRATAAELLKHPFLAKA--GPP 290
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 78/227 (34%), Positives = 123/227 (54%), Gaps = 14/227 (6%)
Query: 1 MDKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKEL-KQRYASWEDCLN-LREVKCLRKLN 58
+D++ K +G G+FGRV TG A+K L KQ+ + + L E + L+ +N
Sbjct: 40 LDQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 59 HSNIVKLKELIQNNNRLYLVFECMECNLYQLMAARDRKL--FSEPEIKAWLFQVFQGLSY 116
+VKL+ ++N+ LY+V E M M + R++ FSEP + + Q+ Y
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYMPGGD---MFSHLRRIGRFSEPHARFYAAQIVLTFEY 156
Query: 117 MHQNGFFHRDLKPENLLVS-QGIIKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQSE 175
+H +RDLKPENLL+ QG IK+ADFG A+ +K G + G+ Y APEI+L S+
Sbjct: 157 LHSLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVK-GRTWX-LCGTPEYLAPEIIL-SK 213
Query: 176 LYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYK--ICGVLGSPT 220
Y+ D WA+G ++ E+ P F A + Q+Y+ + G + P+
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYPPF-FADQPIQIYEKIVSGKVRFPS 259
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 80/287 (27%), Positives = 146/287 (50%), Gaps = 44/287 (15%)
Query: 9 ELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLN-LREVKCLRKLNHSNIVKLKE 67
ELG GAFG+V++A ++ TG A K ++ + S E+ + + E++ L +H IVKL
Sbjct: 26 ELGDGAFGKVYKAKNKETGALAAAKVIETK--SEEELEDYIVEIEILATCDHPYIVKLLG 83
Query: 68 LIQNNNRLYLVFE-CMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQNGFFHRD 126
++ +L+++ E C + +M DR L +EP+I+ Q+ + L+++H HRD
Sbjct: 84 AYYHDGKLWIMIEFCPGGAVDAIMLELDRGL-TEPQIQVVCRQMLEALNFLHSKRIIHRD 142
Query: 127 LKPENLLVS-QGIIKIADFGL-AREIKSGPPYTNYVGSRWYRAPEILLQSEL----YSSK 180
LK N+L++ +G I++ADFG+ A+ +K+ +++G+ ++ APE+++ + Y K
Sbjct: 143 LKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFIGTPYWMAPEVVMCETMKDTPYDYK 202
Query: 181 ADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGS--PTMDSWADGLRQARAIKYQF 238
AD+W++G + E+ + P E + M + + S PT+
Sbjct: 203 ADIWSLGITLIEM---AQIEPPHHELNPMRVLLKIAKSDPPTL----------------- 242
Query: 239 PQLPRANLSALMPSA-SQDAISLFESLCSWDPSKRPTAAEALQHPFF 284
L PS S + + +P RP+AA+ L+HPF
Sbjct: 243 ----------LTPSKWSVEFRDFLKIALDKNPETRPSAAQLLEHPFV 279
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 90/298 (30%), Positives = 139/298 (46%), Gaps = 36/298 (12%)
Query: 10 LGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLNLREVKCLRKL-NHSNIVKLKEL 68
LG GA RV + T + A+K ++++ + REV+ L + H N+++L E
Sbjct: 21 LGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRV-FREVEMLYQCQGHRNVLELIEF 79
Query: 69 IQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQNGFFHRDLK 128
+ +R YLVFE M L R+ F+E E + V L ++H G HRDLK
Sbjct: 80 FEEEDRFYLVFEKMRGGSI-LSHIHKRRHFNELEASVVVQDVASALDFLHNKGIAHRDLK 138
Query: 129 PENLLVSQ----GIIKIADFGLAREIK--------SGPPYTNYVGSRWYRAPEIL----L 172
PEN+L +KI DF L IK S P GS Y APE++
Sbjct: 139 PENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSE 198
Query: 173 QSELYSSKADMWAMGAIMAELFTFCPLFPGASEADQMY---KICGVLGSPTMDSWADGLR 229
++ +Y + D+W++G I+ L + P F G +D + + C + +S +G
Sbjct: 199 EASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQNMLFESIQEG-- 256
Query: 230 QARAIKYQFPQLPRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFFKRC 287
KY+FP A++S A++D IS L D +R +AA+ LQHP+ + C
Sbjct: 257 -----KYEFPDKDWAHISC----AAKDLIS---KLLVRDAKQRLSAAQVLQHPWVQGC 302
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 80/289 (27%), Positives = 133/289 (46%), Gaps = 37/289 (12%)
Query: 7 FKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLNLREVKCLRKLNHSNIVKLK 66
F ++G G+ G V A +G+ VA+K++ R + L EV +R H N+V++
Sbjct: 79 FIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELL-FNEVVIMRDYQHENVVEMY 137
Query: 67 ELIQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQNGFFHRD 126
+ L++V E +E + R +E +I A V Q LS +H G HRD
Sbjct: 138 NSYLVGDELWVVMEFLEGGALTDIVTHTR--MNEEQIAAVCLAVLQALSVLHAQGVIHRD 195
Query: 127 LKPENLLVSQ-GIIKIADFGLAREI-KSGPPYTNYVGSRWYRAPEILLQSELYSSKADMW 184
+K +++L++ G +K++DFG ++ K P VG+ ++ APE L+ Y + D+W
Sbjct: 196 IKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPE-LISRLPYGPEVDIW 254
Query: 185 AMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQARAIKYQFPQLPR- 243
++G ++ E+ P + P L+ + I+ P PR
Sbjct: 255 SLGIMVIEMVDGEPPY---------------FNEPP-------LKAMKMIRDNLP--PRL 290
Query: 244 ANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFFKRCFYAPP 292
NL + PS + L DP++R TAAE L+HPF + PP
Sbjct: 291 KNLHKVSPSLK----GFLDRLLVRDPAQRATAAELLKHPFLAKA--GPP 333
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 80/289 (27%), Positives = 133/289 (46%), Gaps = 37/289 (12%)
Query: 7 FKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLNLREVKCLRKLNHSNIVKLK 66
F ++G G+ G V A +G+ VA+K++ R + L EV +R H N+V++
Sbjct: 34 FIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELL-FNEVVIMRDYQHENVVEMY 92
Query: 67 ELIQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQNGFFHRD 126
+ L++V E +E + R +E +I A V Q LS +H G HRD
Sbjct: 93 NSYLVGDELWVVMEFLEGGALTDIVTHTR--MNEEQIAAVCLAVLQALSVLHAQGVIHRD 150
Query: 127 LKPENLLVSQ-GIIKIADFGLAREI-KSGPPYTNYVGSRWYRAPEILLQSELYSSKADMW 184
+K +++L++ G +K++DFG ++ K P VG+ ++ APE L+ Y + D+W
Sbjct: 151 IKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPE-LISRLPYGPEVDIW 209
Query: 185 AMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQARAIKYQFPQLPR- 243
++G ++ E+ P + P L+ + I+ P PR
Sbjct: 210 SLGIMVIEMVDGEPPY---------------FNEPP-------LKAMKMIRDNLP--PRL 245
Query: 244 ANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFFKRCFYAPP 292
NL + PS + L DP++R TAAE L+HPF + PP
Sbjct: 246 KNLHKVSPSLK----GFLDRLLVRDPAQRATAAELLKHPFLAKA--GPP 288
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 80/287 (27%), Positives = 146/287 (50%), Gaps = 44/287 (15%)
Query: 9 ELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLN-LREVKCLRKLNHSNIVKLKE 67
ELG GAFG+V++A ++ TG A K ++ + S E+ + + E++ L +H IVKL
Sbjct: 18 ELGDGAFGKVYKAKNKETGALAAAKVIETK--SEEELEDYIVEIEILATCDHPYIVKLLG 75
Query: 68 LIQNNNRLYLVFE-CMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQNGFFHRD 126
++ +L+++ E C + +M DR L +EP+I+ Q+ + L+++H HRD
Sbjct: 76 AYYHDGKLWIMIEFCPGGAVDAIMLELDRGL-TEPQIQVVCRQMLEALNFLHSKRIIHRD 134
Query: 127 LKPENLLVS-QGIIKIADFGL-AREIKSGPPYTNYVGSRWYRAPEILLQSEL----YSSK 180
LK N+L++ +G I++ADFG+ A+ +K+ +++G+ ++ APE+++ + Y K
Sbjct: 135 LKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFIGTPYWMAPEVVMCETMKDTPYDYK 194
Query: 181 ADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGS--PTMDSWADGLRQARAIKYQF 238
AD+W++G + E+ + P E + M + + S PT+
Sbjct: 195 ADIWSLGITLIEM---AQIEPPHHELNPMRVLLKIAKSDPPTL----------------- 234
Query: 239 PQLPRANLSALMPSA-SQDAISLFESLCSWDPSKRPTAAEALQHPFF 284
L PS S + + +P RP+AA+ L+HPF
Sbjct: 235 ----------LTPSKWSVEFRDFLKIALDKNPETRPSAAQLLEHPFV 271
>pdb|1Z57|A Chain A, Crystal Structure Of Human Clk1 In Complex With
10z-Hymenialdisine
Length = 339
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 87/327 (26%), Positives = 141/327 (43%), Gaps = 54/327 (16%)
Query: 3 KYSGFKELGRGAFGRVFQAFDEHTG-EAVAIKELK--QRYASWEDCLNLR-EVKCLRKLN 58
+Y LG GAFG+V + D G VA+K +K RY C R E++ L LN
Sbjct: 15 RYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRY-----CEAARSEIQVLEHLN 69
Query: 59 HSN------IVKLKELIQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQ 112
++ V++ E +++ + +VFE + + Y + F I+ +Q+ +
Sbjct: 70 TTDPNSTFRCVQMLEWFEHHGHICIVFELLGLSTYDFIKENGFLPFRLDHIRKMAYQICK 129
Query: 113 GLSYMHQNGFFHRDLKPENLLVSQGI--------------------IKIADFGLAREIKS 152
++++H N H DLKPEN+L Q IK+ DFG A
Sbjct: 130 SVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFGSA--TYD 187
Query: 153 GPPYTNYVGSRWYRAPEILLQSELYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKI 212
++ V +R YRAPE++L +S D+W++G I+ E + +FP + + +
Sbjct: 188 DEHHSTLVSTRHYRAPEVILALG-WSQPCDVWSIGCILIEYYLGFTVFPTHDSKEHLAMM 246
Query: 213 CGVLGSPTMDSWADGLRQARAIKY------QFPQLPRANLSALMP----SASQDA----- 257
+LG P R+ + + + R A P SQD
Sbjct: 247 ERILG-PLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERL 305
Query: 258 ISLFESLCSWDPSKRPTAAEALQHPFF 284
L + + +DP+KR T EAL+HPFF
Sbjct: 306 FDLIQKMLEYDPAKRITLREALKHPFF 332
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 74/216 (34%), Positives = 119/216 (55%), Gaps = 12/216 (5%)
Query: 1 MDKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKEL-KQRYASWEDCLN-LREVKCLRKLN 58
+D++ K LG G+FGRV + +G A+K L KQ+ + + L E + L+ +N
Sbjct: 61 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 120
Query: 59 HSNIVKLKELIQNNNRLYLVFECMECNLYQLMAARDRKL--FSEPEIKAWLFQVFQGLSY 116
+VKL+ ++N+ LY+V E + M + R++ FSEP + + Q+ Y
Sbjct: 121 FPFLVKLEFSFKDNSNLYMVMEYVAGGE---MFSHLRRIGRFSEPHARFYAAQIVLTFEY 177
Query: 117 MHQNGFFHRDLKPENLLVS-QGIIKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQSE 175
+H +RDLKPENLL+ QG I++ DFG A+ +K G +T G+ Y APEI+L S+
Sbjct: 178 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-GATWT-LCGTPEYLAPEIIL-SK 234
Query: 176 LYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYK 211
Y+ D WA+G ++ E+ P F A + Q+Y+
Sbjct: 235 GYNKAVDWWALGVLIYEMAAGYPPF-FADQPIQIYE 269
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 102 bits (254), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 80/289 (27%), Positives = 133/289 (46%), Gaps = 37/289 (12%)
Query: 7 FKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLNLREVKCLRKLNHSNIVKLK 66
F ++G G+ G V A +G+ VA+K++ R + L EV +R H N+V++
Sbjct: 156 FIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELL-FNEVVIMRDYQHENVVEMY 214
Query: 67 ELIQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQNGFFHRD 126
+ L++V E +E + R +E +I A V Q LS +H G HRD
Sbjct: 215 NSYLVGDELWVVMEFLEGGALTDIVTHTR--MNEEQIAAVCLAVLQALSVLHAQGVIHRD 272
Query: 127 LKPENLLVSQ-GIIKIADFGLAREI-KSGPPYTNYVGSRWYRAPEILLQSELYSSKADMW 184
+K +++L++ G +K++DFG ++ K P VG+ ++ APE L+ Y + D+W
Sbjct: 273 IKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPE-LISRLPYGPEVDIW 331
Query: 185 AMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQARAIKYQFPQLPR- 243
++G ++ E+ P + P L+ + I+ P PR
Sbjct: 332 SLGIMVIEMVDGEPPY---------------FNEPP-------LKAMKMIRDNLP--PRL 367
Query: 244 ANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFFKRCFYAPP 292
NL + PS + L DP++R TAAE L+HPF + PP
Sbjct: 368 KNLHKVSPSLK----GFLDRLLVRDPAQRATAAELLKHPFLAKA--GPP 410
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 102 bits (253), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 77/227 (33%), Positives = 123/227 (54%), Gaps = 14/227 (6%)
Query: 1 MDKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKEL-KQRYASWEDCLN-LREVKCLRKLN 58
+D++ K LG G+FGRV TG A+K L KQ+ + + L E + L+ +N
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 100
Query: 59 HSNIVKLKELIQNNNRLYLVFECMECNLYQLMAARDRKL--FSEPEIKAWLFQVFQGLSY 116
+VKL+ ++N+ LY+V E + M + R++ FSEP + + Q+ Y
Sbjct: 101 FPFLVKLEFSFKDNSNLYMVMEYVPGGE---MFSHLRRIGRFSEPHARFYAAQIVLTFEY 157
Query: 117 MHQNGFFHRDLKPENLLVS-QGIIKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQSE 175
+H +RDLKPENLL+ QG I++ DFG A+ +K G +T G+ Y APEI+L S+
Sbjct: 158 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-GRTWT-LCGTPEYLAPEIIL-SK 214
Query: 176 LYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYK--ICGVLGSPT 220
Y+ D WA+G ++ E+ P F A + Q+Y+ + G + P+
Sbjct: 215 GYNKAVDWWALGVLIYEMAAGYPPF-FADQPIQIYEKIVSGKVRFPS 260
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 102 bits (253), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 77/227 (33%), Positives = 123/227 (54%), Gaps = 14/227 (6%)
Query: 1 MDKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKEL-KQRYASWEDCLN-LREVKCLRKLN 58
+D++ K LG G+FGRV TG A+K L KQ+ + + L E + L+ +N
Sbjct: 26 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 85
Query: 59 HSNIVKLKELIQNNNRLYLVFECMECNLYQLMAARDRKL--FSEPEIKAWLFQVFQGLSY 116
+VKL+ ++N+ LY+V E + M + R++ FSEP + + Q+ Y
Sbjct: 86 FPFLVKLEFSFKDNSNLYMVMEYVPGGE---MFSHLRRIGRFSEPHARFYAAQIVLTFEY 142
Query: 117 MHQNGFFHRDLKPENLLVS-QGIIKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQSE 175
+H +RDLKPENLL+ QG I++ DFG A+ +K G +T G+ Y APEI+L S+
Sbjct: 143 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-GRTWT-LCGTPEYLAPEIIL-SK 199
Query: 176 LYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYK--ICGVLGSPT 220
Y+ D WA+G ++ E+ P F A + Q+Y+ + G + P+
Sbjct: 200 GYNKAVDWWALGVLIYEMAAGYPPF-FADQPIQIYEKIVSGKVRFPS 245
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 102 bits (253), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 72/288 (25%), Positives = 131/288 (45%), Gaps = 33/288 (11%)
Query: 1 MDKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLNLREVKCLRKLNHS 60
+D Y +ELG GAFG V + + TG A K + + S ++ + +E++ + L H
Sbjct: 156 LDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVR-KEIQTMSVLRHP 214
Query: 61 NIVKLKELIQNNNRLYLVFECMECN-LYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQ 119
+V L + +++N + +++E M L++ +A K+ SE E ++ QV +GL +MH+
Sbjct: 215 TLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKM-SEDEAVEYMRQVCKGLCHMHE 273
Query: 120 NGFFHRDLKPENLLVS---QGIIKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQSEL 176
N + H DLKPEN++ + +K+ DFGL + G+ + APE+ + +
Sbjct: 274 NNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEVA-EGKP 332
Query: 177 YSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQARAIKY 236
DMW++G + L + F G ++ + LR ++ +
Sbjct: 333 VGYYTDMWSVGVLSYILLSGLSPFGGENDDET-------------------LRNVKSCDW 373
Query: 237 QFPQLPRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFF 284
+ S+D L DP+ R T +AL+HP+
Sbjct: 374 NMDD-------SAFSGISEDGKDFIRKLLLADPNTRMTIHQALEHPWL 414
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 101 bits (252), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 77/227 (33%), Positives = 123/227 (54%), Gaps = 14/227 (6%)
Query: 1 MDKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKEL-KQRYASWEDCLN-LREVKCLRKLN 58
+D++ K +G G+FGRV TG A+K L KQ+ + + L E + L+ +N
Sbjct: 40 LDQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 59 HSNIVKLKELIQNNNRLYLVFECMECNLYQLMAARDRKL--FSEPEIKAWLFQVFQGLSY 116
+VKL+ ++N+ LY+V E + M + R++ FSEP + + Q+ Y
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVPGGE---MFSHLRRIGRFSEPHARFYAAQIVLTFEY 156
Query: 117 MHQNGFFHRDLKPENLLVS-QGIIKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQSE 175
+H +RDLKPENLL+ QG IK+ADFG A+ +K G + G+ Y APEI+L S+
Sbjct: 157 LHSLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVK-GRTWX-LCGTPEYLAPEIIL-SK 213
Query: 176 LYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYK--ICGVLGSPT 220
Y+ D WA+G ++ E+ P F A + Q+Y+ + G + P+
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYPPF-FADQPIQIYEKIVSGKVRFPS 259
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 101 bits (252), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 78/227 (34%), Positives = 124/227 (54%), Gaps = 14/227 (6%)
Query: 1 MDKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKEL-KQRYASWEDCLN-LREVKCLRKLN 58
+D++ K LG G+FGRV TG A+K L KQ+ ++ + L E + L+ +N
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVN 99
Query: 59 HSNIVKLKELIQNNNRLYLVFECMECNLYQLMAARDRKL--FSEPEIKAWLFQVFQGLSY 116
+VKL+ ++N+ LY+V ME M + R++ FSEP + + Q+ Y
Sbjct: 100 FPFLVKLEFSFKDNSNLYMV---MEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEY 156
Query: 117 MHQNGFFHRDLKPENLLVS-QGIIKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQSE 175
+H +RDLKPENL++ QG IK+ DFGLA+ +K G + G+ Y APEI+L S+
Sbjct: 157 LHSLDLIYRDLKPENLMIDQQGYIKVTDFGLAKRVK-GRTWX-LCGTPEYLAPEIIL-SK 213
Query: 176 LYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYK--ICGVLGSPT 220
Y+ D WA+G ++ E+ P F A + Q+Y+ + G + P+
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYPPF-FADQPIQIYEKIVSGKVRFPS 259
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 101 bits (252), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 76/227 (33%), Positives = 123/227 (54%), Gaps = 14/227 (6%)
Query: 1 MDKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKEL-KQRYASWEDCLN-LREVKCLRKLN 58
+D++ K LG G+FGRV + TG A+K L KQ+ + + L E + L+ +N
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 59 HSNIVKLKELIQNNNRLYLVFECMECNLYQLMAARDRKL--FSEPEIKAWLFQVFQGLSY 116
+VKL+ ++N+ LY+V E + M + R++ FSEP + + Q+ Y
Sbjct: 100 FPFLVKLEYSFKDNSNLYMVMEYVPGGE---MFSHLRRIGRFSEPHARFYAAQIVLTFEY 156
Query: 117 MHQNGFFHRDLKPENLLVS-QGIIKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQSE 175
+H +RDLKPENLL+ QG I++ DFG A+ +K G + G+ Y APEI+L S+
Sbjct: 157 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIIL-SK 213
Query: 176 LYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYK--ICGVLGSPT 220
Y+ D WA+G ++ E+ P F A + Q+Y+ + G + P+
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYPPF-FADQPIQIYEKIVSGKVRFPS 259
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 101 bits (252), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 76/227 (33%), Positives = 123/227 (54%), Gaps = 14/227 (6%)
Query: 1 MDKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKEL-KQRYASWEDCLN-LREVKCLRKLN 58
+D++ K LG G+FGRV + TG A+K L KQ+ + + L E + L+ +N
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 59 HSNIVKLKELIQNNNRLYLVFECMECNLYQLMAARDRKL--FSEPEIKAWLFQVFQGLSY 116
+VKL+ ++N+ LY+V E + M + R++ FSEP + + Q+ Y
Sbjct: 100 FPFLVKLEYSFKDNSNLYMVMEYVPGGE---MFSHLRRIGRFSEPHARFYAAQIVLTFEY 156
Query: 117 MHQNGFFHRDLKPENLLVS-QGIIKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQSE 175
+H +RDLKPENLL+ QG I++ DFG A+ +K G + G+ Y APEI+L S+
Sbjct: 157 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIIL-SK 213
Query: 176 LYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYK--ICGVLGSPT 220
Y+ D WA+G ++ E+ P F A + Q+Y+ + G + P+
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYPPF-FADQPIQIYEKIVSGKVRFPS 259
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 101 bits (252), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 72/288 (25%), Positives = 131/288 (45%), Gaps = 33/288 (11%)
Query: 1 MDKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLNLREVKCLRKLNHS 60
+D Y +ELG GAFG V + + TG A K + + S ++ + +E++ + L H
Sbjct: 50 LDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVR-KEIQTMSVLRHP 108
Query: 61 NIVKLKELIQNNNRLYLVFECMECN-LYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQ 119
+V L + +++N + +++E M L++ +A K+ SE E ++ QV +GL +MH+
Sbjct: 109 TLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKM-SEDEAVEYMRQVCKGLCHMHE 167
Query: 120 NGFFHRDLKPENLLVS---QGIIKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQSEL 176
N + H DLKPEN++ + +K+ DFGL + G+ + APE+ + +
Sbjct: 168 NNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEVA-EGKP 226
Query: 177 YSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQARAIKY 236
DMW++G + L + F G ++ + LR ++ +
Sbjct: 227 VGYYTDMWSVGVLSYILLSGLSPFGGENDDET-------------------LRNVKSCDW 267
Query: 237 QFPQLPRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFF 284
+ S+D L DP+ R T +AL+HP+
Sbjct: 268 NMD-------DSAFSGISEDGKDFIRKLLLADPNTRMTIHQALEHPWL 308
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 101 bits (252), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 76/227 (33%), Positives = 123/227 (54%), Gaps = 14/227 (6%)
Query: 1 MDKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKEL-KQRYASWEDCLN-LREVKCLRKLN 58
+D++ K LG G+FGRV + TG A+K L KQ+ + + L E + L+ +N
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 59 HSNIVKLKELIQNNNRLYLVFECMECNLYQLMAARDRKL--FSEPEIKAWLFQVFQGLSY 116
+VKL+ ++N+ LY+V E + M + R++ FSEP + + Q+ Y
Sbjct: 100 FPFLVKLEYSFKDNSNLYMVMEYVPGGE---MFSHLRRIGRFSEPHARFYAAQIVLTFEY 156
Query: 117 MHQNGFFHRDLKPENLLVS-QGIIKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQSE 175
+H +RDLKPENLL+ QG I++ DFG A+ +K G + G+ Y APEI+L S+
Sbjct: 157 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIIL-SK 213
Query: 176 LYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYK--ICGVLGSPT 220
Y+ D WA+G ++ E+ P F A + Q+Y+ + G + P+
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYPPF-FADQPIQIYEKIVSGKVRFPS 259
>pdb|2VAG|A Chain A, Crystal Structure Of Di-Phosphorylated Human Clk1 In
Complex With A Novel Substituted Indole Inhibitor
Length = 339
Score = 101 bits (251), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 87/327 (26%), Positives = 140/327 (42%), Gaps = 54/327 (16%)
Query: 3 KYSGFKELGRGAFGRVFQAFDEHTG-EAVAIKELK--QRYASWEDCLNLR-EVKCLRKLN 58
+Y LG GAFG+V + D G VA+K +K RY C R E++ L LN
Sbjct: 15 RYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRY-----CEAARSEIQVLEHLN 69
Query: 59 HSN------IVKLKELIQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQ 112
++ V++ E +++ + +VFE + + Y + F I+ +Q+ +
Sbjct: 70 TTDPNSTFRCVQMLEWFEHHGHICIVFELLGLSTYDFIKENGFLPFRLDHIRKMAYQICK 129
Query: 113 GLSYMHQNGFFHRDLKPENLLVSQGI--------------------IKIADFGLAREIKS 152
++++H N H DLKPEN+L Q IK+ DFG A
Sbjct: 130 SVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFGSA--TYD 187
Query: 153 GPPYTNYVGSRWYRAPEILLQSELYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKI 212
++ V R YRAPE++L +S D+W++G I+ E + +FP + + +
Sbjct: 188 DEHHSTLVXXRHYRAPEVILALG-WSQPCDVWSIGCILIEYYLGFTVFPTHDSKEHLAMM 246
Query: 213 CGVLGSPTMDSWADGLRQARAIKY------QFPQLPRANLSALMP----SASQDA----- 257
+LG P R+ + + + R A P SQD
Sbjct: 247 ERILG-PLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERL 305
Query: 258 ISLFESLCSWDPSKRPTAAEALQHPFF 284
L + + +DP+KR T EAL+HPFF
Sbjct: 306 FDLIQKMLEYDPAKRITLREALKHPFF 332
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 74/216 (34%), Positives = 118/216 (54%), Gaps = 12/216 (5%)
Query: 1 MDKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKEL-KQRYASWEDCLN-LREVKCLRKLN 58
+D++ K LG G+FGRV + TG A+K L KQ+ + + L E + L+ +N
Sbjct: 61 LDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 120
Query: 59 HSNIVKLKELIQNNNRLYLVFECMECNLYQLMAARDRKL--FSEPEIKAWLFQVFQGLSY 116
+VKL+ ++N+ LY+V E + M + R++ FSEP + + Q+ Y
Sbjct: 121 FPFLVKLEFSFKDNSNLYMVMEYVPGGE---MFSHLRRIGRFSEPHARFYAAQIVLTFEY 177
Query: 117 MHQNGFFHRDLKPENLLVS-QGIIKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQSE 175
+H +RDLKPENLL+ QG I++ DFG A+ +K G + G+ Y APEI+L S+
Sbjct: 178 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIIL-SK 234
Query: 176 LYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYK 211
Y+ D WA+G ++ E+ P F A + Q+Y+
Sbjct: 235 GYNKAVDWWALGVLIYEMAAGYPPF-FADQPIQIYE 269
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 76/227 (33%), Positives = 123/227 (54%), Gaps = 14/227 (6%)
Query: 1 MDKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKEL-KQRYASWEDCLN-LREVKCLRKLN 58
+D++ K LG G+FGRV + +G A+K L KQ+ + + L E + L+ +N
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 59 HSNIVKLKELIQNNNRLYLVFECMECNLYQLMAARDRKL--FSEPEIKAWLFQVFQGLSY 116
+VKL+ ++N+ LY+V E + M + R++ FSEP + + Q+ Y
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGE---MFSHLRRIGRFSEPHARFYAAQIVLTFEY 156
Query: 117 MHQNGFFHRDLKPENLLVS-QGIIKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQSE 175
+H +RDLKPENLL+ QG I++ DFG A+ +K G + G+ Y APEI+L S+
Sbjct: 157 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIIL-SK 213
Query: 176 LYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYK--ICGVLGSPT 220
Y+ D WA+G ++ E+ P F A E Q+Y+ + G + P+
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYPPF-FADEPIQIYEKIVSGKVRFPS 259
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 76/227 (33%), Positives = 123/227 (54%), Gaps = 14/227 (6%)
Query: 1 MDKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKEL-KQRYASWEDCLN-LREVKCLRKLN 58
+D++ K LG G+FGRV + TG A+K L KQ+ + + L E + L+ +N
Sbjct: 33 LDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 92
Query: 59 HSNIVKLKELIQNNNRLYLVFECMECNLYQLMAARDRKL--FSEPEIKAWLFQVFQGLSY 116
+VKL+ ++N+ LY+V E + M + R++ FSEP + + Q+ Y
Sbjct: 93 FPFLVKLEFSFKDNSNLYMVMEYVPGGE---MFSHLRRIGRFSEPHARFYAAQIVLTFEY 149
Query: 117 MHQNGFFHRDLKPENLLVS-QGIIKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQSE 175
+H +RDLKPENLL+ QG I++ DFG A+ +K G + G+ Y APEI+L S+
Sbjct: 150 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIIL-SK 206
Query: 176 LYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYK--ICGVLGSPT 220
Y+ D WA+G ++ E+ P F A + Q+Y+ + G + P+
Sbjct: 207 GYNKAVDWWALGVLIYEMAAGYPPF-FADQPIQIYEKIVSGKVRFPS 252
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 84/282 (29%), Positives = 128/282 (45%), Gaps = 38/282 (13%)
Query: 10 LGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLN--LREVKCLRKLNHSNIVKLKE 67
LG G FG+V E TG VA+K L ++ D + RE++ L+ H +I+KL +
Sbjct: 24 LGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQ 83
Query: 68 LIQNNNRLYLVFECMEC-NLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQNGFFHRD 126
+I + +++V E + L+ + R E E + Q+ G+ Y H++ HRD
Sbjct: 84 VISTPSDIFMVMEYVSGGELFDYICKNGR--LDEKESRRLFQQILSGVDYCHRHMVVHRD 141
Query: 127 LKPENLLVSQGI-IKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQSELYSS-KADMW 184
LKPEN+L+ + KIADFGL+ + G GS Y APE+ + LY+ + D+W
Sbjct: 142 LKPENVLLDAHMNAKIADFGLSNMMSDGEFLRXSCGSPNYAAPEV-ISGRLYAGPEVDIW 200
Query: 185 AMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQARAIKYQFPQLPRA 244
+ G I+ L F KIC DG+ + PQ
Sbjct: 201 SSGVILYALLCGTLPFDDDHVPTLFKKIC------------DGI-------FYTPQY--- 238
Query: 245 NLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFFKR 286
L PS ISL + + DP KR T + +H +FK+
Sbjct: 239 ----LNPS----VISLLKHMLQVDPMKRATIKDIREHEWFKQ 272
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 78/281 (27%), Positives = 132/281 (46%), Gaps = 40/281 (14%)
Query: 10 LGRGAFGRVFQAFDEHTGEAVAIKELKQRY---ASWEDCLNLREVKCLRKLNHSNIVKLK 66
LG+G F + F+ D T E A K + + + +++ E+ R L H ++V
Sbjct: 29 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSM-EISIHRSLAHQHVVGFH 87
Query: 67 ELIQNNNRLYLVFE-CMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQNGFFHR 125
++N+ +++V E C +L +L + RK +EPE + +L Q+ G Y+H+N HR
Sbjct: 88 GFFEDNDFVFVVLELCRRRSLLEL--HKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHR 145
Query: 126 DLKPENLLVSQGI-IKIADFGLAREIK-SGPPYTNYVGSRWYRAPEILLQSELYSSKADM 183
DLK NL +++ + +KI DFGLA +++ G G+ Y APE+ L + +S + D+
Sbjct: 146 DLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEV-LSKKGHSFEVDV 204
Query: 184 WAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQARAIKYQFPQLPR 243
W++G IM L P F + + +I + +Y P+
Sbjct: 205 WSIGCIMYTLLVGKPPFETSCLKETYLRI-------------------KKNEYSIPK--- 242
Query: 244 ANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFF 284
+ P A+ SL + + DP+ RPT E L FF
Sbjct: 243 ----HINPVAA----SLIQKMLQTDPTARPTINELLNDEFF 275
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 77/285 (27%), Positives = 133/285 (46%), Gaps = 34/285 (11%)
Query: 4 YSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLNLREVKCLRKLNHSNIV 63
++ +++G+G+FG VF+ D T + VAIK + A E +E+ L + + +
Sbjct: 29 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 88
Query: 64 KLKELIQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQNGFF 123
K + +L+++ E + + + E +I L ++ +GL Y+H
Sbjct: 89 KYYGSYLKDTKLWIIMEYLGGG--SALDLLEPGPLDETQIATILREILKGLDYLHSEKKI 146
Query: 124 HRDLKPENLLVSQ-GIIKIADFGLAREIKSGPPYTN-YVGSRWYRAPEILLQSELYSSKA 181
HRD+K N+L+S+ G +K+ADFG+A ++ N +VG+ ++ APE++ QS Y SKA
Sbjct: 147 HRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSA-YDSKA 205
Query: 182 DMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQARAIKYQFPQL 241
D+W++G EL G P + +K F +
Sbjct: 206 DIWSLGITAIEL---------------------ARGEPPH-------SELHPMKVLF-LI 236
Query: 242 PRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFFKR 286
P+ N L + S+ E+ + +PS RPTA E L+H F R
Sbjct: 237 PKNNPPTLEGNYSKPLKEFVEACLNKEPSFRPTAKELLKHKFILR 281
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 76/227 (33%), Positives = 123/227 (54%), Gaps = 14/227 (6%)
Query: 1 MDKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKEL-KQRYASWEDCLN-LREVKCLRKLN 58
+D++ K LG G+FGRV + TG A+K L KQ+ + + L E + L+ +N
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 100
Query: 59 HSNIVKLKELIQNNNRLYLVFECMECNLYQLMAARDRKL--FSEPEIKAWLFQVFQGLSY 116
+VKL+ ++N+ LY+V E + M + R++ FSEP + + Q+ Y
Sbjct: 101 FPFLVKLEFSFKDNSNLYMVMEYVPGGE---MFSHLRRIGRFSEPHARFYAAQIVLTFEY 157
Query: 117 MHQNGFFHRDLKPENLLVS-QGIIKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQSE 175
+H +RDLKPENLL+ QG I++ DFG A+ +K G + G+ Y APEI+L S+
Sbjct: 158 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIIL-SK 214
Query: 176 LYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYK--ICGVLGSPT 220
Y+ D WA+G ++ E+ P F A + Q+Y+ + G + P+
Sbjct: 215 GYNKAVDWWALGVLIYEMAAGYPPF-FADQPIQIYEKIVSGKVRFPS 260
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 76/227 (33%), Positives = 123/227 (54%), Gaps = 14/227 (6%)
Query: 1 MDKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKEL-KQRYASWEDCLN-LREVKCLRKLN 58
+D++ K LG G+FGRV + TG A+K L KQ+ + + L E + L+ +N
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 100
Query: 59 HSNIVKLKELIQNNNRLYLVFECMECNLYQLMAARDRKL--FSEPEIKAWLFQVFQGLSY 116
+VKL+ ++N+ LY+V E + M + R++ FSEP + + Q+ Y
Sbjct: 101 FPFLVKLEFSFKDNSNLYMVMEYVPGGE---MFSHLRRIGRFSEPHARFYAAQIVLTFEY 157
Query: 117 MHQNGFFHRDLKPENLLVS-QGIIKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQSE 175
+H +RDLKPENLL+ QG I++ DFG A+ +K G + G+ Y APEI+L S+
Sbjct: 158 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIIL-SK 214
Query: 176 LYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYK--ICGVLGSPT 220
Y+ D WA+G ++ E+ P F A + Q+Y+ + G + P+
Sbjct: 215 GYNKAVDWWALGVLIYEMAAGYPPF-FADQPIQIYEKIVSGKVRFPS 260
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 76/227 (33%), Positives = 123/227 (54%), Gaps = 14/227 (6%)
Query: 1 MDKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKEL-KQRYASWEDCLN-LREVKCLRKLN 58
+D++ K LG G+FGRV + TG A+K L KQ+ + + L E + L+ +N
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 100
Query: 59 HSNIVKLKELIQNNNRLYLVFECMECNLYQLMAARDRKL--FSEPEIKAWLFQVFQGLSY 116
+VKL+ ++N+ LY+V E + M + R++ FSEP + + Q+ Y
Sbjct: 101 FPFLVKLEFSFKDNSNLYMVMEYVPGGE---MFSHLRRIGRFSEPHARFYAAQIVLTFEY 157
Query: 117 MHQNGFFHRDLKPENLLVS-QGIIKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQSE 175
+H +RDLKPENLL+ QG I++ DFG A+ +K G + G+ Y APEI+L S+
Sbjct: 158 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIIL-SK 214
Query: 176 LYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYK--ICGVLGSPT 220
Y+ D WA+G ++ E+ P F A + Q+Y+ + G + P+
Sbjct: 215 GYNKAVDWWALGVLIYEMAAGYPPF-FADQPIQIYEKIVSGKVRFPS 260
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 77/285 (27%), Positives = 133/285 (46%), Gaps = 34/285 (11%)
Query: 4 YSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLNLREVKCLRKLNHSNIV 63
++ +++G+G+FG VF+ D T + VAIK + A E +E+ L + + +
Sbjct: 24 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 83
Query: 64 KLKELIQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQNGFF 123
K + +L+++ E + + + E +I L ++ +GL Y+H
Sbjct: 84 KYYGSYLKDTKLWIIMEYLGGG--SALDLLEPGPLDETQIATILREILKGLDYLHSEKKI 141
Query: 124 HRDLKPENLLVSQ-GIIKIADFGLAREIKSGPPYTN-YVGSRWYRAPEILLQSELYSSKA 181
HRD+K N+L+S+ G +K+ADFG+A ++ N +VG+ ++ APE++ QS Y SKA
Sbjct: 142 HRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQSA-YDSKA 200
Query: 182 DMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQARAIKYQFPQL 241
D+W++G EL G P + +K F +
Sbjct: 201 DIWSLGITAIEL---------------------ARGEPPHS-------ELHPMKVLF-LI 231
Query: 242 PRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFFKR 286
P+ N L + S+ E+ + +PS RPTA E L+H F R
Sbjct: 232 PKNNPPTLEGNYSKPLKEFVEACLNKEPSFRPTAKELLKHKFILR 276
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 78/281 (27%), Positives = 132/281 (46%), Gaps = 40/281 (14%)
Query: 10 LGRGAFGRVFQAFDEHTGEAVAIKELKQRY---ASWEDCLNLREVKCLRKLNHSNIVKLK 66
LG+G F + F+ D T E A K + + + +++ E+ R L H ++V
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSM-EISIHRSLAHQHVVGFH 83
Query: 67 ELIQNNNRLYLVFE-CMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQNGFFHR 125
++N+ +++V E C +L +L + RK +EPE + +L Q+ G Y+H+N HR
Sbjct: 84 GFFEDNDFVFVVLELCRRRSLLEL--HKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHR 141
Query: 126 DLKPENLLVSQGI-IKIADFGLAREIK-SGPPYTNYVGSRWYRAPEILLQSELYSSKADM 183
DLK NL +++ + +KI DFGLA +++ G G+ Y APE+ L + +S + D+
Sbjct: 142 DLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEV-LSKKGHSFEVDV 200
Query: 184 WAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQARAIKYQFPQLPR 243
W++G IM L P F + + +I + +Y P+
Sbjct: 201 WSIGCIMYTLLVGKPPFETSCLKETYLRI-------------------KKNEYSIPK--- 238
Query: 244 ANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFF 284
+ P A+ SL + + DP+ RPT E L FF
Sbjct: 239 ----HINPVAA----SLIQKMLQTDPTARPTINELLNDEFF 271
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 78/281 (27%), Positives = 132/281 (46%), Gaps = 40/281 (14%)
Query: 10 LGRGAFGRVFQAFDEHTGEAVAIKELKQRY---ASWEDCLNLREVKCLRKLNHSNIVKLK 66
LG+G F + F+ D T E A K + + + +++ E+ R L H ++V
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSM-EISIHRSLAHQHVVGFH 83
Query: 67 ELIQNNNRLYLVFE-CMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQNGFFHR 125
++N+ +++V E C +L +L + RK +EPE + +L Q+ G Y+H+N HR
Sbjct: 84 GFFEDNDFVFVVLELCRRRSLLEL--HKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHR 141
Query: 126 DLKPENLLVSQGI-IKIADFGLAREIK-SGPPYTNYVGSRWYRAPEILLQSELYSSKADM 183
DLK NL +++ + +KI DFGLA +++ G G+ Y APE+ L + +S + D+
Sbjct: 142 DLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEV-LSKKGHSFEVDV 200
Query: 184 WAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQARAIKYQFPQLPR 243
W++G IM L P F + + +I + +Y P+
Sbjct: 201 WSIGCIMYTLLVGKPPFETSCLKETYLRI-------------------KKNEYSIPK--- 238
Query: 244 ANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFF 284
+ P A+ SL + + DP+ RPT E L FF
Sbjct: 239 ----HINPVAA----SLIQKMLQTDPTARPTINELLNDEFF 271
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 77/227 (33%), Positives = 123/227 (54%), Gaps = 14/227 (6%)
Query: 1 MDKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKEL-KQRYASWEDCLN-LREVKCLRKLN 58
+D++ K LG G+FGRV + TG A+K L KQ+ + + L E + L+ +N
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 100
Query: 59 HSNIVKLKELIQNNNRLYLVFECMECNLYQLMAARDRKL--FSEPEIKAWLFQVFQGLSY 116
+VKL+ ++N+ LY+V ME M + R++ FSEP + + Q+ Y
Sbjct: 101 FPFLVKLEFSFKDNSNLYMV---MEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEY 157
Query: 117 MHQNGFFHRDLKPENLLVS-QGIIKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQSE 175
+H +RDLKPENL++ QG IK+ DFG A+ +K G + G+ Y APEI+L S+
Sbjct: 158 LHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIIL-SK 214
Query: 176 LYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYK--ICGVLGSPT 220
Y+ D WA+G ++ E+ P F A + Q+Y+ + G + P+
Sbjct: 215 GYNKAVDWWALGVLIYEMAAGYPPF-FADQPIQIYEKIVSGKVRFPS 260
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 77/285 (27%), Positives = 133/285 (46%), Gaps = 34/285 (11%)
Query: 4 YSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLNLREVKCLRKLNHSNIV 63
++ +++G+G+FG VF+ D T + VAIK + A E +E+ L + + +
Sbjct: 9 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 68
Query: 64 KLKELIQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQNGFF 123
K + +L+++ E + + + E +I L ++ +GL Y+H
Sbjct: 69 KYYGSYLKDTKLWIIMEYLGGG--SALDLLEPGPLDETQIATILREILKGLDYLHSEKKI 126
Query: 124 HRDLKPENLLVSQ-GIIKIADFGLAREIKSGPPYTN-YVGSRWYRAPEILLQSELYSSKA 181
HRD+K N+L+S+ G +K+ADFG+A ++ N +VG+ ++ APE++ QS Y SKA
Sbjct: 127 HRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSA-YDSKA 185
Query: 182 DMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQARAIKYQFPQL 241
D+W++G EL G P + +K F +
Sbjct: 186 DIWSLGITAIEL---------------------ARGEPPHS-------ELHPMKVLF-LI 216
Query: 242 PRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFFKR 286
P+ N L + S+ E+ + +PS RPTA E L+H F R
Sbjct: 217 PKNNPPTLEGNYSKPLKEFVEACLNKEPSFRPTAKELLKHKFILR 261
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 75/227 (33%), Positives = 123/227 (54%), Gaps = 14/227 (6%)
Query: 1 MDKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKEL-KQRYASWEDCLN-LREVKCLRKLN 58
+D++ K LG G+FGRV + +G A+K L KQ+ + + L E + L+ +N
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 59 HSNIVKLKELIQNNNRLYLVFECMECNLYQLMAARDRKL--FSEPEIKAWLFQVFQGLSY 116
+VKL+ ++N+ LY+V E + M + R++ FSEP + + Q+ Y
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGE---MFSHLRRIGRFSEPHARFYAAQIVLTFEY 156
Query: 117 MHQNGFFHRDLKPENLLVS-QGIIKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQSE 175
+H +RDLKPENLL+ QG I++ DFG A+ +K G + G+ Y APEI+L S+
Sbjct: 157 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-GRTWX-LAGTPEYLAPEIIL-SK 213
Query: 176 LYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYK--ICGVLGSPT 220
Y+ D WA+G ++ E+ P F A + Q+Y+ + G + P+
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYPPF-FADQPIQIYEKIVSGKVRFPS 259
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 77/285 (27%), Positives = 133/285 (46%), Gaps = 34/285 (11%)
Query: 4 YSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLNLREVKCLRKLNHSNIV 63
++ +++G+G+FG VF+ D T + VAIK + A E +E+ L + + +
Sbjct: 9 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 68
Query: 64 KLKELIQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQNGFF 123
K + +L+++ E + + + E +I L ++ +GL Y+H
Sbjct: 69 KYYGSYLKDTKLWIIMEYLGGG--SALDLLEPGPLDETQIATILREILKGLDYLHSEKKI 126
Query: 124 HRDLKPENLLVSQ-GIIKIADFGLAREIKSGPPYTN-YVGSRWYRAPEILLQSELYSSKA 181
HRD+K N+L+S+ G +K+ADFG+A ++ N +VG+ ++ APE++ QS Y SKA
Sbjct: 127 HRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQSA-YDSKA 185
Query: 182 DMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQARAIKYQFPQL 241
D+W++G EL G P + +K F +
Sbjct: 186 DIWSLGITAIEL---------------------ARGEPPHS-------ELHPMKVLF-LI 216
Query: 242 PRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFFKR 286
P+ N L + S+ E+ + +PS RPTA E L+H F R
Sbjct: 217 PKNNPPTLEGNYSKPLKEFVEACLNKEPSFRPTAKELLKHKFILR 261
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 88/301 (29%), Positives = 138/301 (45%), Gaps = 38/301 (12%)
Query: 2 DKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELK-QRYASWEDCLNLREVKCLRKLNHS 60
D Y + +G GA V A+ E VAIK + ++ + D L L+E++ + + +H
Sbjct: 10 DDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDEL-LKEIQAMSQCHHP 68
Query: 61 NIVKLKELIQNNNRLYLVFECMECN-----LYQLMAARDRK--LFSEPEIKAWLFQVFQG 113
NIV + L+LV + + + ++A + K + E I L +V +G
Sbjct: 69 NIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEG 128
Query: 114 LSYMHQNGFFHRDLKPENLLVSQ-GIIKIADFGLAREIKSGPPYT------NYVGSRWYR 166
L Y+H+NG HRD+K N+L+ + G ++IADFG++ + +G T +VG+ +
Sbjct: 129 LEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWM 188
Query: 167 APEILLQSELYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWAD 226
APE++ Q Y KAD+W+ G EL T GA+ + P M
Sbjct: 189 APEVMEQVRGYDFKADIWSFGITAIELAT------GAAPYHKY---------PPMKVLML 233
Query: 227 GLRQARAIKYQFPQLPRANLSALMPSASQDAISLFESLC-SWDPSKRPTAAEALQHPFFK 285
L+ P L M + SLC DP KRPTAAE L+H FF+
Sbjct: 234 TLQN------DPPSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLRHKFFQ 287
Query: 286 R 286
+
Sbjct: 288 K 288
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 89/311 (28%), Positives = 136/311 (43%), Gaps = 61/311 (19%)
Query: 2 DKYSGFKE-LGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLNLREVKCLRKLNHS 60
D Y K+ LG G G+V + F TG+ A+K L Y S K ++++H
Sbjct: 28 DDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLL---YDS---------PKARQEVDHH 75
Query: 61 -------NIVKLKELIQNNNR----LYLVFECMECN-LYQLMAARDRKLFSEPEIKAWLF 108
+IV + ++ +N + L ++ ECME L+ + R + F+E E +
Sbjct: 76 WQASGGPHIVCILDVYENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMR 135
Query: 109 QVFQGLSYMHQNGFFHRDLKPENLLVS----QGIIKIADFGLAREIKSG----PPYTNYV 160
+ + ++H + HRD+KPENLL + ++K+ DFG A+E P YT Y
Sbjct: 136 DIGTAIQFLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQNALQTPCYTPY- 194
Query: 161 GSRWYRAPEILLQSELYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPT 220
Y APE+ L E Y DMW++G IM L P F Y G SP
Sbjct: 195 ----YVAPEV-LGPEKYDKSCDMWSLGVIMYILLCGFPPF---------YSNTGQAISPG 240
Query: 221 MDSWADGLRQARAIKYQFPQLPRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQ 280
M R+ R +Y FP + + S+DA L L DP++R T + +
Sbjct: 241 MK------RRIRLGQYGFPNPEWSEV-------SEDAKQLIRLLLKTDPTERLTITQFMN 287
Query: 281 HPFFKRCFYAP 291
HP+ + P
Sbjct: 288 HPWINQSMVVP 298
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 73/280 (26%), Positives = 133/280 (47%), Gaps = 33/280 (11%)
Query: 7 FKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLNLREVKCLRKLNHSNIVKLK 66
+ ++G G+ G V A ++H+G VA+K + R + L EV +R H N+V++
Sbjct: 50 YVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELL-FNEVVIMRDYQHFNVVEMY 108
Query: 67 ELIQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQNGFFHRD 126
+ L+++ E ++ + ++ R +E +I V Q L+Y+H G HRD
Sbjct: 109 KSYLVGEELWVLMEFLQGGALTDIVSQVR--LNEEQIATVCEAVLQALAYLHAQGVIHRD 166
Query: 127 LKPENLLVS-QGIIKIADFGLAREI-KSGPPYTNYVGSRWYRAPEILLQSELYSSKADMW 184
+K +++L++ G +K++DFG +I K P VG+ ++ APE++ +S LY+++ D+W
Sbjct: 167 IKSDSILLTLDGRVKLSDFGFCAQISKDVPKRKXLVGTPYWMAPEVISRS-LYATEVDIW 225
Query: 185 AMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQARAIKYQFPQLPRA 244
++G ++ E+ P + S M ++ DS L+ + + P L
Sbjct: 226 SLGIMVIEMVDGEPPYFSDSPVQAMKRL--------RDSPPPKLKNSHKVS---PVLR-- 272
Query: 245 NLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFF 284
E + DP +R TA E L HPF
Sbjct: 273 --------------DFLERMLVRDPQERATAQELLDHPFL 298
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 88/301 (29%), Positives = 138/301 (45%), Gaps = 38/301 (12%)
Query: 2 DKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELK-QRYASWEDCLNLREVKCLRKLNHS 60
D Y + +G GA V A+ E VAIK + ++ + D L L+E++ + + +H
Sbjct: 15 DDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDEL-LKEIQAMSQCHHP 73
Query: 61 NIVKLKELIQNNNRLYLVFECMECN-----LYQLMAARDRK--LFSEPEIKAWLFQVFQG 113
NIV + L+LV + + + ++A + K + E I L +V +G
Sbjct: 74 NIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEG 133
Query: 114 LSYMHQNGFFHRDLKPENLLVSQ-GIIKIADFGLAREIKSGPPYT------NYVGSRWYR 166
L Y+H+NG HRD+K N+L+ + G ++IADFG++ + +G T +VG+ +
Sbjct: 134 LEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWM 193
Query: 167 APEILLQSELYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWAD 226
APE++ Q Y KAD+W+ G EL T GA+ + P M
Sbjct: 194 APEVMEQVRGYDFKADIWSFGITAIELAT------GAAPYHKY---------PPMKVLML 238
Query: 227 GLRQARAIKYQFPQLPRANLSALMPSASQDAISLFESLC-SWDPSKRPTAAEALQHPFFK 285
L+ P L M + SLC DP KRPTAAE L+H FF+
Sbjct: 239 TLQN------DPPSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLRHKFFQ 292
Query: 286 R 286
+
Sbjct: 293 K 293
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 77/227 (33%), Positives = 124/227 (54%), Gaps = 14/227 (6%)
Query: 1 MDKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKEL-KQRYASWEDCLN-LREVKCLRKLN 58
+D++ K LG G+FGRV TG A+K L KQ+ ++ + L E + L+ +N
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVN 99
Query: 59 HSNIVKLKELIQNNNRLYLVFECMECNLYQLMAARDRKL--FSEPEIKAWLFQVFQGLSY 116
+VKL+ ++N+ LY+V ME M + R++ FSEP + + Q+ Y
Sbjct: 100 FPFLVKLEFSFKDNSNLYMV---MEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEY 156
Query: 117 MHQNGFFHRDLKPENLLVS-QGIIKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQSE 175
+H +RDLKPENL++ QG I++ DFGLA+ +K G + G+ Y APEI+L S+
Sbjct: 157 LHSLDLIYRDLKPENLMIDQQGYIQVTDFGLAKRVK-GRTWX-LCGTPEYLAPEIIL-SK 213
Query: 176 LYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYK--ICGVLGSPT 220
Y+ D WA+G ++ E+ P F A + Q+Y+ + G + P+
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYPPF-FADQPIQIYEKIVSGKVRFPS 259
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 89/311 (28%), Positives = 136/311 (43%), Gaps = 61/311 (19%)
Query: 2 DKYSGFKE-LGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLNLREVKCLRKLNHS 60
D Y K+ LG G G+V + F TG+ A+K L Y S K ++++H
Sbjct: 9 DDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLL---YDS---------PKARQEVDHH 56
Query: 61 -------NIVKLKELIQNNNR----LYLVFECMECN-LYQLMAARDRKLFSEPEIKAWLF 108
+IV + ++ +N + L ++ ECME L+ + R + F+E E +
Sbjct: 57 WQASGGPHIVCILDVYENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMR 116
Query: 109 QVFQGLSYMHQNGFFHRDLKPENLLVS----QGIIKIADFGLAREIKSG----PPYTNYV 160
+ + ++H + HRD+KPENLL + ++K+ DFG A+E P YT Y
Sbjct: 117 DIGTAIQFLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQNALQTPCYTPY- 175
Query: 161 GSRWYRAPEILLQSELYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPT 220
Y APE+ L E Y DMW++G IM L P F Y G SP
Sbjct: 176 ----YVAPEV-LGPEKYDKSCDMWSLGVIMYILLCGFPPF---------YSNTGQAISPG 221
Query: 221 MDSWADGLRQARAIKYQFPQLPRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQ 280
M R+ R +Y FP + + S+DA L L DP++R T + +
Sbjct: 222 MK------RRIRLGQYGFPNPEWSEV-------SEDAKQLIRLLLKTDPTERLTITQFMN 268
Query: 281 HPFFKRCFYAP 291
HP+ + P
Sbjct: 269 HPWINQSMVVP 279
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 75/227 (33%), Positives = 123/227 (54%), Gaps = 14/227 (6%)
Query: 1 MDKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKEL-KQRYASWEDCLN-LREVKCLRKLN 58
+D++ K LG G+FGRV + +G A+K L KQ+ + + L E + L+ +N
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 59 HSNIVKLKELIQNNNRLYLVFECMECNLYQLMAARDRKL--FSEPEIKAWLFQVFQGLSY 116
+VKL+ ++N+ LY+V E + M + R++ FSEP + + Q+ Y
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGE---MFSHLRRIGRFSEPHARFYAAQIVLTFEY 156
Query: 117 MHQNGFFHRDLKPENLLVS-QGIIKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQSE 175
+H +RDLKPENLL+ QG I++ DFG A+ +K G + G+ Y APEI+L S+
Sbjct: 157 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIIL-SK 213
Query: 176 LYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYK--ICGVLGSPT 220
Y+ D WA+G ++ E+ P F A + Q+Y+ + G + P+
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYPPF-FADQPIQIYEKIVSGKVRFPS 259
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 75/227 (33%), Positives = 123/227 (54%), Gaps = 14/227 (6%)
Query: 1 MDKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKEL-KQRYASWEDCLN-LREVKCLRKLN 58
+D++ K LG G+FGRV + +G A+K L KQ+ + + L E + L+ +N
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 59 HSNIVKLKELIQNNNRLYLVFECMECNLYQLMAARDRKL--FSEPEIKAWLFQVFQGLSY 116
+VKL+ ++N+ LY+V E + M + R++ FSEP + + Q+ Y
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGE---MFSHLRRIGRFSEPHARFYAAQIVLTFEY 156
Query: 117 MHQNGFFHRDLKPENLLVS-QGIIKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQSE 175
+H +RDLKPENLL+ QG I++ DFG A+ +K G + G+ Y APEI+L S+
Sbjct: 157 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-GRTWX-LXGTPEYLAPEIIL-SK 213
Query: 176 LYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYK--ICGVLGSPT 220
Y+ D WA+G ++ E+ P F A + Q+Y+ + G + P+
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYPPF-FADQPIQIYEKIVSGKVRFPS 259
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 75/227 (33%), Positives = 123/227 (54%), Gaps = 14/227 (6%)
Query: 1 MDKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKEL-KQRYASWEDCLN-LREVKCLRKLN 58
+D++ K LG G+FGRV + +G A+K L KQ+ + + L E + L+ +N
Sbjct: 41 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 100
Query: 59 HSNIVKLKELIQNNNRLYLVFECMECNLYQLMAARDRKL--FSEPEIKAWLFQVFQGLSY 116
+VKL+ ++N+ LY+V E + M + R++ FSEP + + Q+ Y
Sbjct: 101 FPFLVKLEFSFKDNSNLYMVMEYVAGGE---MFSHLRRIGRFSEPHARFYAAQIVLTFEY 157
Query: 117 MHQNGFFHRDLKPENLLVS-QGIIKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQSE 175
+H +RDLKPENLL+ QG I++ DFG A+ +K G + G+ Y APEI+L S+
Sbjct: 158 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIIL-SK 214
Query: 176 LYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYK--ICGVLGSPT 220
Y+ D WA+G ++ E+ P F A + Q+Y+ + G + P+
Sbjct: 215 GYNKAVDWWALGVLIYEMAAGYPPF-FADQPIQIYEKIVSGKVRFPS 260
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 75/227 (33%), Positives = 123/227 (54%), Gaps = 14/227 (6%)
Query: 1 MDKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKEL-KQRYASWEDCLN-LREVKCLRKLN 58
+D++ K LG G+FGRV + +G A+K L KQ+ + + L E + L+ +N
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 59 HSNIVKLKELIQNNNRLYLVFECMECNLYQLMAARDRKL--FSEPEIKAWLFQVFQGLSY 116
+VKL+ ++N+ LY+V E + M + R++ FSEP + + Q+ Y
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGE---MFSHLRRIGRFSEPHARFYAAQIVLTFEY 156
Query: 117 MHQNGFFHRDLKPENLLVS-QGIIKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQSE 175
+H +RDLKPENLL+ QG I++ DFG A+ +K G + G+ Y APEI+L S+
Sbjct: 157 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIIL-SK 213
Query: 176 LYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYK--ICGVLGSPT 220
Y+ D WA+G ++ E+ P F A + Q+Y+ + G + P+
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYPPF-FADQPIQIYEKIVSGKVRFPS 259
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 76/227 (33%), Positives = 122/227 (53%), Gaps = 14/227 (6%)
Query: 1 MDKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKEL-KQRYASWEDCLN-LREVKCLRKLN 58
+D++ K LG G+FGRV TG A+K L KQ+ + + L E + L+ +N
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 59 HSNIVKLKELIQNNNRLYLVFECMECNLYQLMAARDRKL--FSEPEIKAWLFQVFQGLSY 116
+VKL+ ++N+ LY+V E + M + R++ FSEP + + Q+ Y
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGE---MFSHLRRIGRFSEPHARFYAAQIVLTFEY 156
Query: 117 MHQNGFFHRDLKPENLLVS-QGIIKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQSE 175
+H +RDLKPENLL+ QG I++ DFG A+ +K G + G+ Y APEI+L S+
Sbjct: 157 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIIL-SK 213
Query: 176 LYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYK--ICGVLGSPT 220
Y+ D WA+G ++ E+ P F A + Q+Y+ + G + P+
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYPPF-FADQPIQIYEKIVSGKVRFPS 259
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 75/227 (33%), Positives = 123/227 (54%), Gaps = 14/227 (6%)
Query: 1 MDKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKEL-KQRYASWEDCLN-LREVKCLRKLN 58
+D++ K LG G+FGRV + +G A+K L KQ+ + + L E + L+ +N
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 59 HSNIVKLKELIQNNNRLYLVFECMECNLYQLMAARDRKL--FSEPEIKAWLFQVFQGLSY 116
+VKL+ ++N+ LY+V E + M + R++ FSEP + + Q+ Y
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGE---MFSHLRRIGRFSEPHARFYAAQIVLTFEY 156
Query: 117 MHQNGFFHRDLKPENLLVS-QGIIKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQSE 175
+H +RDLKPENLL+ QG I++ DFG A+ +K G + G+ Y APEI+L S+
Sbjct: 157 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIIL-SK 213
Query: 176 LYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYK--ICGVLGSPT 220
Y+ D WA+G ++ E+ P F A + Q+Y+ + G + P+
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYPPF-FADQPIQIYEKIVSGKVRFPS 259
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 78/281 (27%), Positives = 132/281 (46%), Gaps = 40/281 (14%)
Query: 10 LGRGAFGRVFQAFDEHTGEAVAIKELKQRY---ASWEDCLNLREVKCLRKLNHSNIVKLK 66
LG+G F + F+ D T E A K + + + +++ E+ R L H ++V
Sbjct: 49 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSM-EISIHRSLAHQHVVGFH 107
Query: 67 ELIQNNNRLYLVFE-CMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQNGFFHR 125
++N+ +++V E C +L +L + RK +EPE + +L Q+ G Y+H+N HR
Sbjct: 108 GFFEDNDFVFVVLELCRRRSLLEL--HKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHR 165
Query: 126 DLKPENLLVSQGI-IKIADFGLAREIK-SGPPYTNYVGSRWYRAPEILLQSELYSSKADM 183
DLK NL +++ + +KI DFGLA +++ G G+ Y APE+ L + +S + D+
Sbjct: 166 DLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEV-LSKKGHSFEVDV 224
Query: 184 WAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQARAIKYQFPQLPR 243
W++G IM L P F + + +I + +Y P+
Sbjct: 225 WSIGCIMYTLLVGKPPFETSCLKETYLRI-------------------KKNEYSIPK--- 262
Query: 244 ANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFF 284
+ P A+ SL + + DP+ RPT E L FF
Sbjct: 263 ----HINPVAA----SLIQKMLQTDPTARPTINELLNDEFF 295
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 75/227 (33%), Positives = 123/227 (54%), Gaps = 14/227 (6%)
Query: 1 MDKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKEL-KQRYASWEDCLN-LREVKCLRKLN 58
+D++ K LG G+FGRV + +G A+K L KQ+ + + L E + L+ +N
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 59 HSNIVKLKELIQNNNRLYLVFECMECNLYQLMAARDRKL--FSEPEIKAWLFQVFQGLSY 116
+VKL+ ++N+ LY+V E + M + R++ FSEP + + Q+ Y
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGE---MFSHLRRIGRFSEPHARFYAAQIVLTFEY 156
Query: 117 MHQNGFFHRDLKPENLLVS-QGIIKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQSE 175
+H +RDLKPENLL+ QG I++ DFG A+ +K G + G+ Y APEI+L S+
Sbjct: 157 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIIL-SK 213
Query: 176 LYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYK--ICGVLGSPT 220
Y+ D WA+G ++ E+ P F A + Q+Y+ + G + P+
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYPPF-FADQPIQIYEKIVSGKVRFPS 259
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 78/281 (27%), Positives = 132/281 (46%), Gaps = 40/281 (14%)
Query: 10 LGRGAFGRVFQAFDEHTGEAVAIKELKQRY---ASWEDCLNLREVKCLRKLNHSNIVKLK 66
LG+G F + F+ D T E A K + + + +++ E+ R L H ++V
Sbjct: 47 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSM-EISIHRSLAHQHVVGFH 105
Query: 67 ELIQNNNRLYLVFE-CMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQNGFFHR 125
++N+ +++V E C +L +L + RK +EPE + +L Q+ G Y+H+N HR
Sbjct: 106 GFFEDNDFVFVVLELCRRRSLLEL--HKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHR 163
Query: 126 DLKPENLLVSQGI-IKIADFGLAREIK-SGPPYTNYVGSRWYRAPEILLQSELYSSKADM 183
DLK NL +++ + +KI DFGLA +++ G G+ Y APE+ L + +S + D+
Sbjct: 164 DLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEV-LSKKGHSFEVDV 222
Query: 184 WAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQARAIKYQFPQLPR 243
W++G IM L P F + + +I + +Y P+
Sbjct: 223 WSIGCIMYTLLVGKPPFETSCLKETYLRI-------------------KKNEYSIPK--- 260
Query: 244 ANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFF 284
+ P A+ SL + + DP+ RPT E L FF
Sbjct: 261 ----HINPVAA----SLIQKMLQTDPTARPTINELLNDEFF 293
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 77/288 (26%), Positives = 131/288 (45%), Gaps = 33/288 (11%)
Query: 2 DKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLNLREVKCLRKLNHSN 61
D Y +ELG GAFG V + ++ TG K + Y + + E+ + +L+H
Sbjct: 51 DYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVK-NEISIMNQLHHPK 109
Query: 62 IVKLKELIQNNNRLYLVFECMEC-NLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQN 120
++ L + ++ + L+ E + L+ +AA D K+ SE E+ ++ Q +GL +MH++
Sbjct: 110 LINLHDAFEDKYEMVLILEFLSGGELFDRIAAEDYKM-SEAEVINYMRQACEGLKHMHEH 168
Query: 121 GFFHRDLKPENLLVSQ---GIIKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQSELY 177
H D+KPEN++ +KI DFGLA ++ + + APEI + E
Sbjct: 169 SIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVKVTTATAEFAAPEI-VDREPV 227
Query: 178 SSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQARAIKYQ 237
DMWA+G + L + L P A E D + L+ + ++
Sbjct: 228 GFYTDMWAIGVLGYVLLS--GLSPFAGEDD-----------------LETLQNVKRCDWE 268
Query: 238 FPQLPRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFFK 285
F + S S +A ++L +P KR T +AL+HP+ K
Sbjct: 269 FDE-------DAFSSVSPEAKDFIKNLLQKEPRKRLTVHDALEHPWLK 309
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 76/227 (33%), Positives = 122/227 (53%), Gaps = 14/227 (6%)
Query: 1 MDKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKEL-KQRYASWEDCLN-LREVKCLRKLN 58
+D++ K LG G+FGRV TG A+K L KQ+ + + L E + L+ +N
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 59 HSNIVKLKELIQNNNRLYLVFECMECNLYQLMAARDRKL--FSEPEIKAWLFQVFQGLSY 116
+VKL+ ++N+ LY+V E + M + R++ FSEP + + Q+ Y
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVPGGE---MFSHLRRIGRFSEPHARFYAAQIVLTFEY 156
Query: 117 MHQNGFFHRDLKPENLLVS-QGIIKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQSE 175
+H +RDLKPENLL+ QG I++ DFG A+ +K G + G+ Y APEI+L S+
Sbjct: 157 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIIL-SK 213
Query: 176 LYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYK--ICGVLGSPT 220
Y+ D WA+G ++ E+ P F A + Q+Y+ + G + P+
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYPPF-FADQPIQIYEKIVSGKVRFPS 259
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 76/227 (33%), Positives = 122/227 (53%), Gaps = 14/227 (6%)
Query: 1 MDKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKEL-KQRYASWEDCLN-LREVKCLRKLN 58
+D++ K LG G+FGRV TG A+K L KQ+ + + L E + L+ +N
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 59 HSNIVKLKELIQNNNRLYLVFECMECNLYQLMAARDRKL--FSEPEIKAWLFQVFQGLSY 116
+VKL+ ++N+ LY+V E + M + R++ FSEP + + Q+ Y
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVPGGE---MFSHLRRIGRFSEPHARFYAAQIVLTFEY 156
Query: 117 MHQNGFFHRDLKPENLLVS-QGIIKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQSE 175
+H +RDLKPENLL+ QG I++ DFG A+ +K G + G+ Y APEI+L S+
Sbjct: 157 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIIL-SK 213
Query: 176 LYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYK--ICGVLGSPT 220
Y+ D WA+G ++ E+ P F A + Q+Y+ + G + P+
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYPPF-FADQPIQIYEKIVSGKVRFPS 259
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 76/227 (33%), Positives = 122/227 (53%), Gaps = 14/227 (6%)
Query: 1 MDKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKEL-KQRYASWEDCLN-LREVKCLRKLN 58
+D++ K LG G+FGRV TG A+K L KQ+ + + L E + L+ +N
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 100
Query: 59 HSNIVKLKELIQNNNRLYLVFECMECNLYQLMAARDRKL--FSEPEIKAWLFQVFQGLSY 116
+VKL+ ++N+ LY+V E + M + R++ FSEP + + Q+ Y
Sbjct: 101 FPFLVKLEFSFKDNSNLYMVMEYVPGGE---MFSHLRRIGRFSEPHARFYAAQIVLTFEY 157
Query: 117 MHQNGFFHRDLKPENLLVS-QGIIKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQSE 175
+H +RDLKPENLL+ QG I++ DFG A+ +K G + G+ Y APEI+L S+
Sbjct: 158 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIIL-SK 214
Query: 176 LYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYK--ICGVLGSPT 220
Y+ D WA+G ++ E+ P F A + Q+Y+ + G + P+
Sbjct: 215 GYNKAVDWWALGVLIYEMAAGYPPF-FADQPIQIYEKIVSGKVRFPS 260
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 76/227 (33%), Positives = 122/227 (53%), Gaps = 14/227 (6%)
Query: 1 MDKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKEL-KQRYASWEDCLN-LREVKCLRKLN 58
+D++ K LG G+FGRV TG A+K L KQ+ + + L E + L+ +N
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 59 HSNIVKLKELIQNNNRLYLVFECMECNLYQLMAARDRKL--FSEPEIKAWLFQVFQGLSY 116
+VKL+ ++N+ LY+V E + M + R++ FSEP + + Q+ Y
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVPGGE---MFSHLRRIGRFSEPHARFYAAQIVLTFEY 156
Query: 117 MHQNGFFHRDLKPENLLVS-QGIIKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQSE 175
+H +RDLKPENLL+ QG I++ DFG A+ +K G + G+ Y APEI+L S+
Sbjct: 157 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIIL-SK 213
Query: 176 LYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYK--ICGVLGSPT 220
Y+ D WA+G ++ E+ P F A + Q+Y+ + G + P+
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYPPF-FADQPIQIYEKIVSGKVRFPS 259
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 75/227 (33%), Positives = 123/227 (54%), Gaps = 14/227 (6%)
Query: 1 MDKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKEL-KQRYASWEDCLN-LREVKCLRKLN 58
+D++ K LG G+FGRV + +G A+K L KQ+ + + L E + L+ +N
Sbjct: 27 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 86
Query: 59 HSNIVKLKELIQNNNRLYLVFECMECNLYQLMAARDRKL--FSEPEIKAWLFQVFQGLSY 116
+VKL+ ++N+ LY+V E + M + R++ FSEP + + Q+ Y
Sbjct: 87 FPFLVKLEFSFKDNSNLYMVMEYVAGGE---MFSHLRRIGRFSEPHARFYAAQIVLTFEY 143
Query: 117 MHQNGFFHRDLKPENLLVS-QGIIKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQSE 175
+H +RDLKPENLL+ QG I++ DFG A+ +K G + G+ Y APEI+L S+
Sbjct: 144 LHSLDLIYRDLKPENLLIDEQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIIL-SK 200
Query: 176 LYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYK--ICGVLGSPT 220
Y+ D WA+G ++ E+ P F A + Q+Y+ + G + P+
Sbjct: 201 GYNKAVDWWALGVLIYEMAAGYPPF-FADQPIQIYEKIVSGKVRFPS 246
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 76/227 (33%), Positives = 122/227 (53%), Gaps = 14/227 (6%)
Query: 1 MDKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKEL-KQRYASWEDCLN-LREVKCLRKLN 58
+D++ + LG G+FGRV + TG A+K L KQ+ + + L E + + +N
Sbjct: 41 LDQFERIRTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRIQQAVN 100
Query: 59 HSNIVKLKELIQNNNRLYLVFECMECNLYQLMAARDRKL--FSEPEIKAWLFQVFQGLSY 116
+VKL+ ++N+ LY+V E M + R++ FSEP + + Q+ Y
Sbjct: 101 FPFLVKLEFSFKDNSNLYMVLEYAPGGE---MFSHLRRIGRFSEPHARFYAAQIVLTFEY 157
Query: 117 MHQNGFFHRDLKPENLLVS-QGIIKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQSE 175
+H +RDLKPENLL+ QG IK+ADFG A+ +K G + G+ Y APEI+L S+
Sbjct: 158 LHSLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVK-GRTWX-LCGTPEYLAPEIIL-SK 214
Query: 176 LYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYK--ICGVLGSPT 220
Y+ D WA+G ++ E+ P F A + Q+Y+ + G + P+
Sbjct: 215 GYNKAVDWWALGVLIYEMAAGYPPF-FADQPIQIYEKIVSGKVRFPS 260
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 77/227 (33%), Positives = 122/227 (53%), Gaps = 14/227 (6%)
Query: 1 MDKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKEL-KQRYASWEDCLN-LREVKCLRKLN 58
+D++ K LG G+FGRV TG A+K L KQ+ + + L E + L+ +N
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 59 HSNIVKLKELIQNNNRLYLVFECMECNLYQLMAARDRKL--FSEPEIKAWLFQVFQGLSY 116
+VKL+ ++N+ LY+V ME M + R++ FSEP + + Q+ Y
Sbjct: 100 FPFLVKLEFSFKDNSNLYMV---MEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEY 156
Query: 117 MHQNGFFHRDLKPENLLVS-QGIIKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQSE 175
+H +RDLKPENL++ QG IK+ DFG A+ +K G + G+ Y APEI+L S+
Sbjct: 157 LHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIIL-SK 213
Query: 176 LYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYK--ICGVLGSPT 220
Y+ D WA+G ++ E+ P F A + Q+Y+ + G + P+
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYPPF-FADQPIQIYEKIVSGKVRFPS 259
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 75/227 (33%), Positives = 122/227 (53%), Gaps = 14/227 (6%)
Query: 1 MDKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKEL-KQRYASWEDCLN-LREVKCLRKLN 58
+D++ K LG G+FGRV + TG A+K L KQ+ + + L E + L+ +N
Sbjct: 33 LDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 92
Query: 59 HSNIVKLKELIQNNNRLYLVFECMECNLYQLMAARDRKL--FSEPEIKAWLFQVFQGLSY 116
+VKL+ ++N+ LY+V E + M + R++ F EP + + Q+ Y
Sbjct: 93 FPFLVKLEFSFKDNSNLYMVMEYVPGGE---MFSHLRRIGRFXEPHARFYAAQIVLTFEY 149
Query: 117 MHQNGFFHRDLKPENLLVS-QGIIKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQSE 175
+H +RDLKPENLL+ QG I++ DFG A+ +K G + G+ Y APEI+L S+
Sbjct: 150 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIIL-SK 206
Query: 176 LYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYK--ICGVLGSPT 220
Y+ D WA+G ++ E+ P F A + Q+Y+ + G + P+
Sbjct: 207 GYNKAVDWWALGVLIYEMAAGYPPF-FADQPIQIYEKIVSGKVRFPS 252
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 78/281 (27%), Positives = 132/281 (46%), Gaps = 40/281 (14%)
Query: 10 LGRGAFGRVFQAFDEHTGEAVAIKELKQRY---ASWEDCLNLREVKCLRKLNHSNIVKLK 66
LG+G F + F+ D T E A K + + + +++ E+ R L H ++V
Sbjct: 23 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSM-EISIHRSLAHQHVVGFH 81
Query: 67 ELIQNNNRLYLVFE-CMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQNGFFHR 125
++N+ +++V E C +L +L + RK +EPE + +L Q+ G Y+H+N HR
Sbjct: 82 GFFEDNDFVFVVLELCRRRSLLEL--HKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHR 139
Query: 126 DLKPENLLVSQGI-IKIADFGLAREIK-SGPPYTNYVGSRWYRAPEILLQSELYSSKADM 183
DLK NL +++ + +KI DFGLA +++ G G+ Y APE+ L + +S + D+
Sbjct: 140 DLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEV-LSKKGHSFEVDV 198
Query: 184 WAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQARAIKYQFPQLPR 243
W++G IM L P F + + +I + +Y P+
Sbjct: 199 WSIGCIMYTLLVGKPPFETSCLKETYLRI-------------------KKNEYSIPK--- 236
Query: 244 ANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFF 284
+ P A+ SL + + DP+ RPT E L FF
Sbjct: 237 ----HINPVAA----SLIQKMLQTDPTARPTINELLNDEFF 269
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 88/299 (29%), Positives = 137/299 (45%), Gaps = 43/299 (14%)
Query: 3 KYSGFKELGRGAFGRVFQAFDEHTGE--AVAIKELKQRYASWEDCLNLRE-----VKCLR 55
KY +GRG V + TG AV I E+ S E +RE LR
Sbjct: 95 KYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILR 154
Query: 56 KL-NHSNIVKLKELIQNNNRLYLVFECM-ECNLYQLMAARDRKLFSEPEIKAWLFQVFQG 113
++ H +I+ L + ++++ ++LVF+ M + L+ + ++ SE E ++ + + +
Sbjct: 155 QVAGHPHIITLIDSYESSSFMFLVFDLMRKGELFDYLT--EKVALSEKETRSIMRSLLEA 212
Query: 114 LSYMHQNGFFHRDLKPENLLVSQGI-IKIADFGLAREIKSGPPYTNYVGSRWYRAPEILL 172
+S++H N HRDLKPEN+L+ + I+++DFG + ++ G G+ Y APEIL
Sbjct: 213 VSFLHANNIVHRDLKPENILLDDNMQIRLSDFGFSCHLEPGEKLRELCGTPGYLAPEILK 272
Query: 173 QS-----ELYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADG 227
S Y + D+WA G I+ L P F + +L
Sbjct: 273 CSMDETHPGYGKEVDLWACGVILFTLLAGSPPF---------WHRRQILM---------- 313
Query: 228 LRQARAIKYQFPQLPRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFFKR 286
LR +YQF + S S +D IS L DP R TA +ALQHPFF+R
Sbjct: 314 LRMIMEGQYQFSSPEWDDRS----STVKDLIS---RLLQVDPEARLTAEQALQHPFFER 365
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 78/283 (27%), Positives = 126/283 (44%), Gaps = 40/283 (14%)
Query: 8 KELGRGAFGRVFQAFDEHTGEAVAIKEL---KQRYASWEDCLNLREVKCLRKLNHSNIVK 64
+ LG+G FG V+ A + + +A+K L + A E L REV+ L H NI++
Sbjct: 18 RPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLR-REVEIQSHLRHPNILR 76
Query: 65 LKELIQNNNRLYLVFECMEC-NLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQNGFF 123
L + R+YL+ E +Y+ + R F E ++ ++ LSY H
Sbjct: 77 LYGYFHDATRVYLILEYAPLGTVYRELQKLSR--FDEQRTATYITELANALSYCHSKRVI 134
Query: 124 HRDLKPENLLV-SQGIIKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQSELYSSKAD 182
HRD+KPENLL+ S G +KIADFG + S T G+ Y PE +++ ++ K D
Sbjct: 135 HRDIKPENLLLGSNGELKIADFGWSVHAPSS-RRTTLCGTLDYLPPE-MIEGRMHDEKVD 192
Query: 183 MWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQARAIKYQFPQLP 242
+W++G + E P F ++ + R+ +++ FP
Sbjct: 193 LWSLGVLCYEFLVGMPPFEA-------------------HTYQETYRRISRVEFTFPDF- 232
Query: 243 RANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFFK 285
++ A L L + S+R T AE L+HP+ K
Sbjct: 233 ----------VTEGARDLISRLLKHNASQRLTLAEVLEHPWIK 265
>pdb|2EU9|A Chain A, Crystal Structure Of Clk3
Length = 355
Score = 98.6 bits (244), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 83/327 (25%), Positives = 143/327 (43%), Gaps = 52/327 (15%)
Query: 2 DKYSGFKELGRGAFGRVFQAFDEHTGEA-VAIKEL----KQRYASWEDCLNLREVKCLRK 56
++Y LG G FG+V + D G++ VA+K + K R A+ + L+++K K
Sbjct: 19 ERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREAARLEINVLKKIKEKDK 78
Query: 57 LNHSNIVKLKELIQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSY 116
N V + + + + + FE + N ++ + + + + P ++ +Q+ L +
Sbjct: 79 ENKFLCVLMSDWFNFHGHMCIAFELLGKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRF 138
Query: 117 MHQNGFFHRDLKPENLL--------------------VSQGIIKIADFGLAREIKSGPPY 156
+H+N H DLKPEN+L V I++ADFG A +
Sbjct: 139 LHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSA--TFDHEHH 196
Query: 157 TNYVGSRWYRAPEILLQSELYSSKADMWAMGAIMAELFTFCPLFPGASEADQ---MYKIC 213
T V +R YR PE++L+ ++ D+W++G I+ E + LF + M KI
Sbjct: 197 TTIVATRHYRPPEVILELG-WAQPCDVWSIGCILFEYYRGFTLFQTHENREHLVMMEKIL 255
Query: 214 GVLGSPTMDS-------------WADGLRQARAIKYQFPQLPRANLSALMPSASQDAISL 260
G + S + W + R +K L + M S + + L
Sbjct: 256 GPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKP-----LKSYMLQDSLEHVQL 310
Query: 261 FE---SLCSWDPSKRPTAAEALQHPFF 284
F+ + +DP++R T AEAL HPFF
Sbjct: 311 FDLMRRMLEFDPAQRITLAEALLHPFF 337
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 98.6 bits (244), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 70/225 (31%), Positives = 117/225 (52%), Gaps = 11/225 (4%)
Query: 3 KYSGFKELGRGAFGRVFQAFDEHTGEA---VAIKELKQRYASWEDCLNLR-EVKCLRKLN 58
++ K LG+G+FG+VF +A A+K LK+ D + + E L ++N
Sbjct: 25 QFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVN 84
Query: 59 HSNIVKLKELIQNNNRLYLVFECMEC-NLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYM 117
H IVKL Q +LYL+ + + +L+ ++ +F+E ++K +L ++ L ++
Sbjct: 85 HPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKE--VMFTEEDVKFYLAELALALDHL 142
Query: 118 HQNGFFHRDLKPENLLVS-QGIIKIADFGLARE-IKSGPPYTNYVGSRWYRAPEILLQSE 175
H G +RDLKPEN+L+ +G IK+ DFGL++E I ++ G+ Y APE+ +
Sbjct: 143 HSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEV-VNRR 201
Query: 176 LYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGV-LGSP 219
++ AD W+ G +M E+ T F G + M I LG P
Sbjct: 202 GHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMP 246
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 98.6 bits (244), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 74/227 (32%), Positives = 123/227 (54%), Gaps = 14/227 (6%)
Query: 1 MDKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKEL-KQRYASWEDCLN-LREVKCLRKLN 58
+D++ K LG G+FGRV + +G A+K L KQ+ + + L E + L+ +N
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 59 HSNIVKLKELIQNNNRLYLVFECMECNLYQLMAARDRKL--FSEPEIKAWLFQVFQGLSY 116
+VKL+ ++N+ LY+V E + M + R++ FSEP + + Q+ Y
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGE---MFSHLRRIGRFSEPHARFYAAQIVLTFEY 156
Query: 117 MHQNGFFHRDLKPENLLVS-QGIIKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQSE 175
+H +RDLKPENLL+ QG I++ DFG A+ +K G + G+ Y APEI+L S+
Sbjct: 157 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIIL-SK 213
Query: 176 LYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYK--ICGVLGSPT 220
Y+ D WA+G ++ ++ P F A + Q+Y+ + G + P+
Sbjct: 214 GYNKAVDWWALGVLIYQMAAGYPPF-FADQPIQIYEKIVSGKVRFPS 259
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 98.6 bits (244), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 74/227 (32%), Positives = 123/227 (54%), Gaps = 14/227 (6%)
Query: 1 MDKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKEL-KQRYASWEDCLN-LREVKCLRKLN 58
+D++ K LG G+FGRV + +G A+K L KQ+ + + L E + L+ +N
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 59 HSNIVKLKELIQNNNRLYLVFECMECNLYQLMAARDRKL--FSEPEIKAWLFQVFQGLSY 116
+VKL+ ++N+ LY+V E + M + R++ F+EP + + Q+ Y
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGE---MFSHLRRIGRFAEPHARFYAAQIVLTFEY 156
Query: 117 MHQNGFFHRDLKPENLLVS-QGIIKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQSE 175
+H +RDLKPENLL+ QG I++ DFG A+ +K G + G+ Y APEI+L S+
Sbjct: 157 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIIL-SK 213
Query: 176 LYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYK--ICGVLGSPT 220
Y+ D WA+G ++ E+ P F A + Q+Y+ + G + P+
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYPPF-FADQPIQIYEKIVSGKVRFPS 259
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 98.6 bits (244), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 70/225 (31%), Positives = 117/225 (52%), Gaps = 11/225 (4%)
Query: 3 KYSGFKELGRGAFGRVFQAFDEHTGEA---VAIKELKQRYASWEDCLNLR-EVKCLRKLN 58
++ K LG+G+FG+VF +A A+K LK+ D + + E L ++N
Sbjct: 25 QFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVN 84
Query: 59 HSNIVKLKELIQNNNRLYLVFECMEC-NLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYM 117
H IVKL Q +LYL+ + + +L+ ++ +F+E ++K +L ++ L ++
Sbjct: 85 HPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKE--VMFTEEDVKFYLAELALALDHL 142
Query: 118 HQNGFFHRDLKPENLLVS-QGIIKIADFGLARE-IKSGPPYTNYVGSRWYRAPEILLQSE 175
H G +RDLKPEN+L+ +G IK+ DFGL++E I ++ G+ Y APE+ +
Sbjct: 143 HSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEV-VNRR 201
Query: 176 LYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGV-LGSP 219
++ AD W+ G +M E+ T F G + M I LG P
Sbjct: 202 GHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMP 246
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 98.6 bits (244), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 70/225 (31%), Positives = 117/225 (52%), Gaps = 11/225 (4%)
Query: 3 KYSGFKELGRGAFGRVFQAFDEHTGEA---VAIKELKQRYASWEDCLNLR-EVKCLRKLN 58
++ K LG+G+FG+VF +A A+K LK+ D + + E L ++N
Sbjct: 26 QFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVN 85
Query: 59 HSNIVKLKELIQNNNRLYLVFECMEC-NLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYM 117
H IVKL Q +LYL+ + + +L+ ++ +F+E ++K +L ++ L ++
Sbjct: 86 HPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKE--VMFTEEDVKFYLAELALALDHL 143
Query: 118 HQNGFFHRDLKPENLLVS-QGIIKIADFGLARE-IKSGPPYTNYVGSRWYRAPEILLQSE 175
H G +RDLKPEN+L+ +G IK+ DFGL++E I ++ G+ Y APE+ +
Sbjct: 144 HSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEV-VNRR 202
Query: 176 LYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGV-LGSP 219
++ AD W+ G +M E+ T F G + M I LG P
Sbjct: 203 GHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMP 247
>pdb|2WU6|A Chain A, Crystal Structure Of The Human Clk3 In Complex With Dki
pdb|2WU7|A Chain A, Crystal Structure Of The Human Clk3 In Complex With V25
pdb|3RAW|A Chain A, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
pdb|3RAW|B Chain B, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
Length = 381
Score = 98.6 bits (244), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 83/327 (25%), Positives = 143/327 (43%), Gaps = 52/327 (15%)
Query: 2 DKYSGFKELGRGAFGRVFQAFDEHTGEA-VAIKEL----KQRYASWEDCLNLREVKCLRK 56
++Y LG G FG+V + D G++ VA+K + K R A+ + L+++K K
Sbjct: 51 ERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREAARLEINVLKKIKEKDK 110
Query: 57 LNHSNIVKLKELIQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSY 116
N V + + + + + FE + N ++ + + + + P ++ +Q+ L +
Sbjct: 111 ENKFLCVLMSDWFNFHGHMCIAFELLGKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRF 170
Query: 117 MHQNGFFHRDLKPENLL--------------------VSQGIIKIADFGLAREIKSGPPY 156
+H+N H DLKPEN+L V I++ADFG A +
Sbjct: 171 LHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSA--TFDHEHH 228
Query: 157 TNYVGSRWYRAPEILLQSELYSSKADMWAMGAIMAELFTFCPLFPGASEADQ---MYKIC 213
T V +R YR PE++L+ ++ D+W++G I+ E + LF + M KI
Sbjct: 229 TTIVATRHYRPPEVILELG-WAQPCDVWSIGCILFEYYRGFTLFQTHENREHLVMMEKIL 287
Query: 214 GVLGSPTMDS-------------WADGLRQARAIKYQFPQLPRANLSALMPSASQDAISL 260
G + S + W + R +K L + M S + + L
Sbjct: 288 GPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKP-----LKSYMLQDSLEHVQL 342
Query: 261 FE---SLCSWDPSKRPTAAEALQHPFF 284
F+ + +DP++R T AEAL HPFF
Sbjct: 343 FDLMRRMLEFDPAQRITLAEALLHPFF 369
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 98.6 bits (244), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 85/296 (28%), Positives = 133/296 (44%), Gaps = 50/296 (16%)
Query: 10 LGRGAFGRVFQAFDEHTGEAVAIKELKQRYA---SWEDCLNLRE-----VKCLRKLN-HS 60
LGRG V + + T + A+K + S E+ LRE V LRK++ H
Sbjct: 25 LGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHP 84
Query: 61 NIVKLKELIQNNNRLYLVFECME-CNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQ 119
NI++LK+ + N +LVF+ M+ L+ + ++ SE E + + + + + +H+
Sbjct: 85 NIIQLKDTYETNTFFFLVFDLMKKGELFDYLT--EKVTLSEKETRKIMRALLEVICALHK 142
Query: 120 NGFFHRDLKPENLLVSQGI-IKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQS---- 174
HRDLKPEN+L+ + IK+ DFG + ++ G + G+ Y APEI+ S
Sbjct: 143 LNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLRSVCGTPSYLAPEIIECSMNDN 202
Query: 175 -ELYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICG---VLGSPTMDSWADGLRQ 230
Y + DMW+ G IM L P F + + I GSP D ++D ++
Sbjct: 203 HPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPEWDDYSDTVK- 261
Query: 231 ARAIKYQFPQLPRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFFKR 286
D +S F + P KR TA EAL HPFF++
Sbjct: 262 -------------------------DLVSRFLVV---QPQKRYTAEEALAHPFFQQ 289
>pdb|2EXE|A Chain A, Crystal Structure Of The Phosphorylated Clk3
Length = 357
Score = 98.6 bits (244), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 83/327 (25%), Positives = 143/327 (43%), Gaps = 52/327 (15%)
Query: 2 DKYSGFKELGRGAFGRVFQAFDEHTGEA-VAIKEL----KQRYASWEDCLNLREVKCLRK 56
++Y LG G FG+V + D G++ VA+K + K R A+ + L+++K K
Sbjct: 28 ERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREAARLEINVLKKIKEKDK 87
Query: 57 LNHSNIVKLKELIQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSY 116
N V + + + + + FE + N ++ + + + + P ++ +Q+ L +
Sbjct: 88 ENKFLCVLMSDWFNFHGHMCIAFELLGKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRF 147
Query: 117 MHQNGFFHRDLKPENLL--------------------VSQGIIKIADFGLAREIKSGPPY 156
+H+N H DLKPEN+L V I++ADFG A +
Sbjct: 148 LHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSA--TFDHEHH 205
Query: 157 TNYVGSRWYRAPEILLQSELYSSKADMWAMGAIMAELFTFCPLFPGASEADQ---MYKIC 213
T V +R YR PE++L+ ++ D+W++G I+ E + LF + M KI
Sbjct: 206 TTIVATRHYRPPEVILELG-WAQPCDVWSIGCILFEYYRGFTLFQTHENREHLVMMEKIL 264
Query: 214 GVLGSPTMDS-------------WADGLRQARAIKYQFPQLPRANLSALMPSASQDAISL 260
G + S + W + R +K L + M S + + L
Sbjct: 265 GPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKP-----LKSYMLQDSLEHVQL 319
Query: 261 FE---SLCSWDPSKRPTAAEALQHPFF 284
F+ + +DP++R T AEAL HPFF
Sbjct: 320 FDLMRRMLEFDPAQRITLAEALLHPFF 346
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 98.6 bits (244), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 82/293 (27%), Positives = 131/293 (44%), Gaps = 41/293 (13%)
Query: 1 MDKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCL--NLREVKCLRKLN 58
M+ + K LG+G FG+V ++ TG A+K L++ +D + + E + L+
Sbjct: 4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTR 63
Query: 59 HSNIVKLKELIQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMH 118
H + LK Q ++RL V E +R+R +F+E + + ++ L Y+H
Sbjct: 64 HPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRER-VFTEERARFYGAEIVSALEYLH 122
Query: 119 QNGFFHRDLKPENLLVSQ-GIIKIADFGLARE-IKSGPPYTNYVGSRWYRAPEILLQSEL 176
+RD+K ENL++ + G IKI DFGL +E I G + G+ Y APE+L ++
Sbjct: 123 SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDND- 181
Query: 177 YSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQARAIKY 236
Y D W +G +M E+ +CG L P + D R I
Sbjct: 182 YGRAVDWWGLGVVMYEM------------------MCGRL--PFYNQ--DHERLFELILM 219
Query: 237 QFPQLPRANLSALMPSASQDAISLFESLCSWDPSKR-----PTAAEALQHPFF 284
+ + PR + S +A SL L DP +R A E ++H FF
Sbjct: 220 EEIRFPR--------TLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFF 264
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 98.2 bits (243), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 77/284 (27%), Positives = 127/284 (44%), Gaps = 48/284 (16%)
Query: 10 LGRGAFGRVFQAFDEHTGEAVAIKEL---KQRYASWEDCLNLREVKCLRKLNHSNIVKLK 66
LG+G FG V+ A ++ + +A+K L + A E L REV+ L H NI++L
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLR-REVEIQSHLRHPNILRLY 79
Query: 67 ELIQNNNRLYLVFECMECNLYQLMAARDRKL-----FSEPEIKAWLFQVFQGLSYMHQNG 121
+ R+YL+ E Y + R+L F E ++ ++ LSY H
Sbjct: 80 GYFHDATRVYLILE------YAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR 133
Query: 122 FFHRDLKPENLLV-SQGIIKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQSELYSSK 180
HRD+KPENLL+ S G +KIADFG + S T+ G+ Y PE +++ ++ K
Sbjct: 134 VIHRDIKPENLLLGSAGELKIADFGWSVHAPSS-RRTDLCGTLDYLPPE-MIEGRMHDEK 191
Query: 181 ADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQARAIKYQFPQ 240
D+W++G + E P F +++ + ++ +++ FP
Sbjct: 192 VDLWSLGVLCYEFLVGKPPFEA-------------------NTYQETYKRISRVEFTFPD 232
Query: 241 LPRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFF 284
++ A L L +PS+RP E L+HP+
Sbjct: 233 F-----------VTEGARDLISRLLKHNPSQRPMLREVLEHPWI 265
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 98.2 bits (243), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 85/296 (28%), Positives = 132/296 (44%), Gaps = 50/296 (16%)
Query: 10 LGRGAFGRVFQAFDEHTGEAVAIKELKQRYA---SWEDCLNLRE-----VKCLRKLN-HS 60
LGRG V + + T + A+K + S E+ LRE V LRK++ H
Sbjct: 25 LGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHP 84
Query: 61 NIVKLKELIQNNNRLYLVFECME-CNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQ 119
NI++LK+ + N +LVF+ M+ L+ + ++ SE E + + + + + +H+
Sbjct: 85 NIIQLKDTYETNTFFFLVFDLMKKGELFDYLT--EKVTLSEKETRKIMRALLEVICALHK 142
Query: 120 NGFFHRDLKPENLLVSQGI-IKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQS---- 174
HRDLKPEN+L+ + IK+ DFG + ++ G G+ Y APEI+ S
Sbjct: 143 LNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLREVCGTPSYLAPEIIECSMNDN 202
Query: 175 -ELYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICG---VLGSPTMDSWADGLRQ 230
Y + DMW+ G IM L P F + + I GSP D ++D ++
Sbjct: 203 HPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPEWDDYSDTVK- 261
Query: 231 ARAIKYQFPQLPRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFFKR 286
D +S F + P KR TA EAL HPFF++
Sbjct: 262 -------------------------DLVSRFLVV---QPQKRYTAEEALAHPFFQQ 289
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 98.2 bits (243), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 82/293 (27%), Positives = 131/293 (44%), Gaps = 41/293 (13%)
Query: 1 MDKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCL--NLREVKCLRKLN 58
M+ + K LG+G FG+V ++ TG A+K L++ +D + + E + L+
Sbjct: 7 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTR 66
Query: 59 HSNIVKLKELIQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMH 118
H + LK Q ++RL V E +R+R +F+E + + ++ L Y+H
Sbjct: 67 HPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRER-VFTEERARFYGAEIVSALEYLH 125
Query: 119 QNGFFHRDLKPENLLVSQ-GIIKIADFGLARE-IKSGPPYTNYVGSRWYRAPEILLQSEL 176
+RD+K ENL++ + G IKI DFGL +E I G + G+ Y APE+L ++
Sbjct: 126 SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDND- 184
Query: 177 YSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQARAIKY 236
Y D W +G +M E+ +CG L P + D R I
Sbjct: 185 YGRAVDWWGLGVVMYEM------------------MCGRL--PFYNQ--DHERLFELILM 222
Query: 237 QFPQLPRANLSALMPSASQDAISLFESLCSWDPSKR-----PTAAEALQHPFF 284
+ + PR + S +A SL L DP +R A E ++H FF
Sbjct: 223 EEIRFPR--------TLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFF 267
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 98.2 bits (243), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 82/293 (27%), Positives = 131/293 (44%), Gaps = 41/293 (13%)
Query: 1 MDKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCL--NLREVKCLRKLN 58
M+ + K LG+G FG+V ++ TG A+K L++ +D + + E + L+
Sbjct: 4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTR 63
Query: 59 HSNIVKLKELIQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMH 118
H + LK Q ++RL V E +R+R +F+E + + ++ L Y+H
Sbjct: 64 HPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRER-VFTEERARFYGAEIVSALEYLH 122
Query: 119 QNGFFHRDLKPENLLVSQ-GIIKIADFGLARE-IKSGPPYTNYVGSRWYRAPEILLQSEL 176
+RD+K ENL++ + G IKI DFGL +E I G + G+ Y APE+L ++
Sbjct: 123 SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDND- 181
Query: 177 YSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQARAIKY 236
Y D W +G +M E+ +CG L P + D R I
Sbjct: 182 YGRAVDWWGLGVVMYEM------------------MCGRL--PFYNQ--DHERLFELILM 219
Query: 237 QFPQLPRANLSALMPSASQDAISLFESLCSWDPSKR-----PTAAEALQHPFF 284
+ + PR + S +A SL L DP +R A E ++H FF
Sbjct: 220 EEIRFPR--------TLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFF 264
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 98.2 bits (243), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 77/284 (27%), Positives = 127/284 (44%), Gaps = 48/284 (16%)
Query: 10 LGRGAFGRVFQAFDEHTGEAVAIKEL---KQRYASWEDCLNLREVKCLRKLNHSNIVKLK 66
LG+G FG V+ A ++ + +A+K L + A E L REV+ L H NI++L
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLR-REVEIQSHLRHPNILRLY 74
Query: 67 ELIQNNNRLYLVFECMECNLYQLMAARDRKL-----FSEPEIKAWLFQVFQGLSYMHQNG 121
+ R+YL+ E Y + R+L F E ++ ++ LSY H
Sbjct: 75 GYFHDATRVYLILE------YAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR 128
Query: 122 FFHRDLKPENLLV-SQGIIKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQSELYSSK 180
HRD+KPENLL+ S G +KIADFG + S T+ G+ Y PE +++ ++ K
Sbjct: 129 VIHRDIKPENLLLGSAGELKIADFGWSVHAPSS-RRTDLCGTLDYLPPE-MIEGRMHDEK 186
Query: 181 ADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQARAIKYQFPQ 240
D+W++G + E P F +++ + ++ +++ FP
Sbjct: 187 VDLWSLGVLCYEFLVGKPPFEA-------------------NTYQETYKRISRVEFTFPD 227
Query: 241 LPRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFF 284
++ A L L +PS+RP E L+HP+
Sbjct: 228 F-----------VTEGARDLISRLLKHNPSQRPMLREVLEHPWI 260
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 98.2 bits (243), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 80/296 (27%), Positives = 137/296 (46%), Gaps = 39/296 (13%)
Query: 1 MDKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQR--YASWEDCLNLREVKCLRKLN 58
M +Y + LG+G F + ++ D T E A K + + + E+ + L+
Sbjct: 41 MKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLD 100
Query: 59 HSNIVKLKELIQNNNRLYLVFE-CMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYM 117
+ ++V ++++ +Y+V E C +L +L + RK +EPE + ++ Q QG+ Y+
Sbjct: 101 NPHVVGFHGFFEDDDFVYVVLEICRRRSLLEL--HKRRKAVTEPEARYFMRQTIQGVQYL 158
Query: 118 HQNGFFHRDLKPENLLVSQGI-IKIADFGLAREIK-SGPPYTNYVGSRWYRAPEILLQSE 175
H N HRDLK NL ++ + +KI DFGLA +I+ G + G+ Y APE+L +
Sbjct: 159 HNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKDLCGTPNYIAPEVLCKKG 218
Query: 176 LYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQARAIK 235
+S + D+W++G I+ L P F + + +I + +
Sbjct: 219 -HSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRI-------------------KKNE 258
Query: 236 YQFPQLPRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFFKRCFYAP 291
Y P+ + P AS +L + DP+ RP+ AE L FF YAP
Sbjct: 259 YSVPR-------HINPVAS----ALIRRMLHADPTLRPSVAELLTDEFFTSG-YAP 302
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 98.2 bits (243), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 73/227 (32%), Positives = 123/227 (54%), Gaps = 14/227 (6%)
Query: 1 MDKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKEL-KQRYASWEDCLN-LREVKCLRKLN 58
+D++ K LG G+FGRV + +G A+K L KQ+ + + L E + L+ +N
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 59 HSNIVKLKELIQNNNRLYLVFECMECNLYQLMAARDRKL--FSEPEIKAWLFQVFQGLSY 116
+VKL+ ++N+ LY+V E + M + R++ FSEP + + Q+ Y
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGE---MFSHLRRIGRFSEPHARFYAAQIVLTFEY 156
Query: 117 MHQNGFFHRDLKPENLLVS-QGIIKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQSE 175
+H +RDLKPENL++ QG I++ DFG A+ +K G + G+ Y APEI++ S+
Sbjct: 157 LHSLDLIYRDLKPENLIIDQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIII-SK 213
Query: 176 LYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYK--ICGVLGSPT 220
Y+ D WA+G ++ E+ P F A + Q+Y+ + G + P+
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYPPF-FADQPIQIYEKIVSGKVRFPS 259
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 98.2 bits (243), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 85/296 (28%), Positives = 132/296 (44%), Gaps = 50/296 (16%)
Query: 10 LGRGAFGRVFQAFDEHTGEAVAIKELKQRYA---SWEDCLNLRE-----VKCLRKLN-HS 60
LGRG V + + T + A+K + S E+ LRE V LRK++ H
Sbjct: 12 LGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHP 71
Query: 61 NIVKLKELIQNNNRLYLVFECME-CNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQ 119
NI++LK+ + N +LVF+ M+ L+ + ++ SE E + + + + + +H+
Sbjct: 72 NIIQLKDTYETNTFFFLVFDLMKKGELFDYLT--EKVTLSEKETRKIMRALLEVICALHK 129
Query: 120 NGFFHRDLKPENLLVSQGI-IKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQS---- 174
HRDLKPEN+L+ + IK+ DFG + ++ G G+ Y APEI+ S
Sbjct: 130 LNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLREVCGTPSYLAPEIIECSMNDN 189
Query: 175 -ELYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICG---VLGSPTMDSWADGLRQ 230
Y + DMW+ G IM L P F + + I GSP D ++D ++
Sbjct: 190 HPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPEWDDYSDTVK- 248
Query: 231 ARAIKYQFPQLPRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFFKR 286
D +S F + P KR TA EAL HPFF++
Sbjct: 249 -------------------------DLVSRFLVV---QPQKRYTAEEALAHPFFQQ 276
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 98.2 bits (243), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 77/284 (27%), Positives = 127/284 (44%), Gaps = 48/284 (16%)
Query: 10 LGRGAFGRVFQAFDEHTGEAVAIKEL---KQRYASWEDCLNLREVKCLRKLNHSNIVKLK 66
LG+G FG V+ A ++ + +A+K L + A E L REV+ L H NI++L
Sbjct: 17 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLR-REVEIQSHLRHPNILRLY 75
Query: 67 ELIQNNNRLYLVFECMECNLYQLMAARDRKL-----FSEPEIKAWLFQVFQGLSYMHQNG 121
+ R+YL+ E Y + R+L F E ++ ++ LSY H
Sbjct: 76 GYFHDATRVYLILE------YAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR 129
Query: 122 FFHRDLKPENLLV-SQGIIKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQSELYSSK 180
HRD+KPENLL+ S G +KIADFG + S T+ G+ Y PE +++ ++ K
Sbjct: 130 VIHRDIKPENLLLGSAGELKIADFGWSVHAPSS-RRTDLCGTLDYLPPE-MIEGRMHDEK 187
Query: 181 ADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQARAIKYQFPQ 240
D+W++G + E P F +++ + ++ +++ FP
Sbjct: 188 VDLWSLGVLCYEFLVGKPPFEA-------------------NTYQETYKRISRVEFTFPD 228
Query: 241 LPRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFF 284
++ A L L +PS+RP E L+HP+
Sbjct: 229 F-----------VTEGARDLISRLLKHNPSQRPMLREVLEHPWI 261
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 98.2 bits (243), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 77/284 (27%), Positives = 127/284 (44%), Gaps = 48/284 (16%)
Query: 10 LGRGAFGRVFQAFDEHTGEAVAIKEL---KQRYASWEDCLNLREVKCLRKLNHSNIVKLK 66
LG+G FG V+ A ++ + +A+K L + A E L REV+ L H NI++L
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLR-REVEIQSHLRHPNILRLY 74
Query: 67 ELIQNNNRLYLVFECMECNLYQLMAARDRKL-----FSEPEIKAWLFQVFQGLSYMHQNG 121
+ R+YL+ E Y + R+L F E ++ ++ LSY H
Sbjct: 75 GYFHDATRVYLILE------YAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR 128
Query: 122 FFHRDLKPENLLV-SQGIIKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQSELYSSK 180
HRD+KPENLL+ S G +KIADFG + S T+ G+ Y PE +++ ++ K
Sbjct: 129 VIHRDIKPENLLLGSAGELKIADFGWSVHAPSS-RRTDLCGTLDYLPPE-MIEGRMHDEK 186
Query: 181 ADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQARAIKYQFPQ 240
D+W++G + E P F +++ + ++ +++ FP
Sbjct: 187 VDLWSLGVLCYEFLVGKPPFEA-------------------NTYQETYKRISRVEFTFPD 227
Query: 241 LPRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFF 284
++ A L L +PS+RP E L+HP+
Sbjct: 228 F-----------VTEGARDLISRLLKHNPSQRPMLREVLEHPWI 260
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 98.2 bits (243), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 74/227 (32%), Positives = 122/227 (53%), Gaps = 14/227 (6%)
Query: 1 MDKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKEL-KQRYASWEDCLN-LREVKCLRKLN 58
+D++ K LG G+FGRV + +G A+K L KQ+ + + L E + L+ +N
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 59 HSNIVKLKELIQNNNRLYLVFECMECNLYQLMAARDRKL--FSEPEIKAWLFQVFQGLSY 116
+VKL+ ++N+ LY+V E + M + R++ F EP + + Q+ Y
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGE---MFSHLRRIGRFXEPHARFYAAQIVLTFEY 156
Query: 117 MHQNGFFHRDLKPENLLVS-QGIIKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQSE 175
+H +RDLKPENLL+ QG I++ DFG A+ +K G + G+ Y APEI+L S+
Sbjct: 157 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIIL-SK 213
Query: 176 LYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYK--ICGVLGSPT 220
Y+ D WA+G ++ E+ P F A + Q+Y+ + G + P+
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYPPF-FADQPIQIYEKIVSGKVRFPS 259
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 98.2 bits (243), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 72/216 (33%), Positives = 117/216 (54%), Gaps = 12/216 (5%)
Query: 1 MDKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKEL-KQRYASWEDCLN-LREVKCLRKLN 58
+D++ K LG G+FGRV + +G A+K L KQ+ + + L E + L+ +N
Sbjct: 61 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 120
Query: 59 HSNIVKLKELIQNNNRLYLVFECMECNLYQLMAARDRKL--FSEPEIKAWLFQVFQGLSY 116
+VKL+ ++N+ LY+V E + M + R++ F EP + + Q+ Y
Sbjct: 121 FPFLVKLEFSFKDNSNLYMVMEYVAGGE---MFSHLRRIGRFXEPHARFYAAQIVLTFEY 177
Query: 117 MHQNGFFHRDLKPENLLVS-QGIIKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQSE 175
+H +RDLKPENLL+ QG I++ DFG A+ +K G + G+ Y APEI+L S+
Sbjct: 178 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIIL-SK 234
Query: 176 LYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYK 211
Y+ D WA+G ++ E+ P F A + Q+Y+
Sbjct: 235 GYNKAVDWWALGVLIYEMAAGYPPF-FADQPIQIYE 269
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 98.2 bits (243), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 80/296 (27%), Positives = 137/296 (46%), Gaps = 39/296 (13%)
Query: 1 MDKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQR--YASWEDCLNLREVKCLRKLN 58
M +Y + LG+G F + ++ D T E A K + + + E+ + L+
Sbjct: 25 MKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLD 84
Query: 59 HSNIVKLKELIQNNNRLYLVFE-CMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYM 117
+ ++V ++++ +Y+V E C +L +L + RK +EPE + ++ Q QG+ Y+
Sbjct: 85 NPHVVGFHGFFEDDDFVYVVLEICRRRSLLEL--HKRRKAVTEPEARYFMRQTIQGVQYL 142
Query: 118 HQNGFFHRDLKPENLLVSQGI-IKIADFGLAREIK-SGPPYTNYVGSRWYRAPEILLQSE 175
H N HRDLK NL ++ + +KI DFGLA +I+ G + G+ Y APE+L +
Sbjct: 143 HNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKDLCGTPNYIAPEVLCKKG 202
Query: 176 LYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQARAIK 235
+S + D+W++G I+ L P F + + +I + +
Sbjct: 203 -HSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRI-------------------KKNE 242
Query: 236 YQFPQLPRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFFKRCFYAP 291
Y P+ + P AS +L + DP+ RP+ AE L FF YAP
Sbjct: 243 YSVPR-------HINPVAS----ALIRRMLHADPTLRPSVAELLTDEFFTSG-YAP 286
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 98.2 bits (243), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 76/227 (33%), Positives = 122/227 (53%), Gaps = 14/227 (6%)
Query: 1 MDKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKEL-KQRYASWEDCLN-LREVKCLRKLN 58
+D++ K LG G+FGRV TG A+K L KQ+ + + L E + L+ +N
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 59 HSNIVKLKELIQNNNRLYLVFECMECNLYQLMAARDRKL--FSEPEIKAWLFQVFQGLSY 116
+VKL+ ++N+ LY+V ME M + R++ FSEP + + Q+ Y
Sbjct: 100 FPFLVKLEFSFKDNSNLYMV---MEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEY 156
Query: 117 MHQNGFFHRDLKPENLLVS-QGIIKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQSE 175
+H +RDLKPENL++ QG I++ DFG A+ +K G + G+ Y APEI+L S+
Sbjct: 157 LHSLDLIYRDLKPENLMIDQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIIL-SK 213
Query: 176 LYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYK--ICGVLGSPT 220
Y+ D WA+G ++ E+ P F A + Q+Y+ + G + P+
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYPPF-FADQPIQIYEKIVSGKVRFPS 259
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 98.2 bits (243), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 75/227 (33%), Positives = 121/227 (53%), Gaps = 14/227 (6%)
Query: 1 MDKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKEL-KQRYASWEDCLN-LREVKCLRKLN 58
+D++ K LG G+FGRV TG A+K L KQ+ + + L E + L+ +N
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 59 HSNIVKLKELIQNNNRLYLVFECMECNLYQLMAARDRKL--FSEPEIKAWLFQVFQGLSY 116
+VKL+ ++N+ LY+V E + M + R++ F EP + + Q+ Y
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVPGGE---MFSHLRRIGRFXEPHARFYAAQIVLTFEY 156
Query: 117 MHQNGFFHRDLKPENLLVS-QGIIKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQSE 175
+H +RDLKPENLL+ QG I++ DFG A+ +K G + G+ Y APEI+L S+
Sbjct: 157 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIIL-SK 213
Query: 176 LYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYK--ICGVLGSPT 220
Y+ D WA+G ++ E+ P F A + Q+Y+ + G + P+
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYPPF-FADQPIQIYEKIVSGKVRFPS 259
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 97.8 bits (242), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 75/227 (33%), Positives = 121/227 (53%), Gaps = 14/227 (6%)
Query: 1 MDKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKEL-KQRYASWEDCLN-LREVKCLRKLN 58
+D++ K LG G+FGRV TG A+K L KQ+ + + L E + L+ +N
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 59 HSNIVKLKELIQNNNRLYLVFECMECNLYQLMAARDRKL--FSEPEIKAWLFQVFQGLSY 116
+VKL+ ++N+ LY+V E + M + R++ F EP + + Q+ Y
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVPGGE---MFSHLRRIGRFXEPHARFYAAQIVLTFEY 156
Query: 117 MHQNGFFHRDLKPENLLVS-QGIIKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQSE 175
+H +RDLKPENLL+ QG I++ DFG A+ +K G + G+ Y APEI+L S+
Sbjct: 157 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIIL-SK 213
Query: 176 LYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYK--ICGVLGSPT 220
Y+ D WA+G ++ E+ P F A + Q+Y+ + G + P+
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYPPF-FADQPIQIYEKIVSGKVRFPS 259
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 97.8 bits (242), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 88/294 (29%), Positives = 133/294 (45%), Gaps = 42/294 (14%)
Query: 1 MDKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCL--NLREVKCLRKLN 58
M+++ K LG+G FG+V ++ TG A+K LK+ +D + L E + L+
Sbjct: 147 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSR 206
Query: 59 HSNIVKLKELIQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMH 118
H + LK Q ++RL V E +R+R +FSE + + ++ L Y+H
Sbjct: 207 HPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRER-VFSEDRARFYGAEIVSALDYLH 265
Query: 119 -QNGFFHRDLKPENLLVSQ-GIIKIADFGLARE-IKSGPPYTNYVGSRWYRAPEILLQSE 175
+ +RDLK ENL++ + G IKI DFGL +E IK G + G+ Y APE+L ++
Sbjct: 266 SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCGTPEYLAPEVLEDND 325
Query: 176 LYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQARAIK 235
Y D W +G +M E+ +CG L P + D + I
Sbjct: 326 -YGRAVDWWGLGVVMYEM------------------MCGRL--PFYNQ--DHEKLFELIL 362
Query: 236 YQFPQLPRANLSALMPSASQDAISLFESLCSWDPSKR-----PTAAEALQHPFF 284
+ + PR L P A SL L DP +R A E +QH FF
Sbjct: 363 MEEIRFPR----TLGPEAK----SLLSGLLKKDPKQRLGGGSEDAKEIMQHRFF 408
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 97.8 bits (242), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 77/284 (27%), Positives = 126/284 (44%), Gaps = 48/284 (16%)
Query: 10 LGRGAFGRVFQAFDEHTGEAVAIKEL---KQRYASWEDCLNLREVKCLRKLNHSNIVKLK 66
LG+G FG V+ A ++ + +A+K L + A E L REV+ L H NI++L
Sbjct: 42 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLR-REVEIQSHLRHPNILRLY 100
Query: 67 ELIQNNNRLYLVFECMECNLYQLMAARDRKL-----FSEPEIKAWLFQVFQGLSYMHQNG 121
+ R+YL+ E Y + R+L F E ++ ++ LSY H
Sbjct: 101 GYFHDATRVYLILE------YAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR 154
Query: 122 FFHRDLKPENLLV-SQGIIKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQSELYSSK 180
HRD+KPENLL+ S G +KIADFG + S T G+ Y PE +++ ++ K
Sbjct: 155 VIHRDIKPENLLLGSAGELKIADFGWSVHAPSS-RRTTLCGTLDYLPPE-MIEGRMHDEK 212
Query: 181 ADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQARAIKYQFPQ 240
D+W++G + E P F +++ + ++ +++ FP
Sbjct: 213 VDLWSLGVLCYEFLVGKPPFEA-------------------NTYQETYKRISRVEFTFPD 253
Query: 241 LPRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFF 284
++ A L L +PS+RP E L+HP+
Sbjct: 254 F-----------VTEGARDLISRLLKHNPSQRPMLREVLEHPWI 286
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 97.8 bits (242), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 74/227 (32%), Positives = 122/227 (53%), Gaps = 14/227 (6%)
Query: 1 MDKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKEL-KQRYASWEDCLN-LREVKCLRKLN 58
+D++ K LG G+FGRV + +G A+K L KQ+ + + L E + L+ +N
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 59 HSNIVKLKELIQNNNRLYLVFECMECNLYQLMAARDRKL--FSEPEIKAWLFQVFQGLSY 116
+VKL+ ++N+ LY+V E + M + R++ F EP + + Q+ Y
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGE---MFSHLRRIGRFXEPHARFYAAQIVLTFEY 156
Query: 117 MHQNGFFHRDLKPENLLVS-QGIIKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQSE 175
+H +RDLKPENLL+ QG I++ DFG A+ +K G + G+ Y APEI+L S+
Sbjct: 157 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIIL-SK 213
Query: 176 LYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYK--ICGVLGSPT 220
Y+ D WA+G ++ E+ P F A + Q+Y+ + G + P+
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYPPF-FADQPIQIYEKIVSGKVRFPS 259
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 97.8 bits (242), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 77/284 (27%), Positives = 126/284 (44%), Gaps = 48/284 (16%)
Query: 10 LGRGAFGRVFQAFDEHTGEAVAIKEL---KQRYASWEDCLNLREVKCLRKLNHSNIVKLK 66
LG+G FG V+ A ++ + +A+K L + A E L REV+ L H NI++L
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLR-REVEIQSHLRHPNILRLY 77
Query: 67 ELIQNNNRLYLVFECMECNLYQLMAARDRKL-----FSEPEIKAWLFQVFQGLSYMHQNG 121
+ R+YL+ E Y + R+L F E ++ ++ LSY H
Sbjct: 78 GYFHDATRVYLILE------YAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR 131
Query: 122 FFHRDLKPENLLV-SQGIIKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQSELYSSK 180
HRD+KPENLL+ S G +KIADFG + S T G+ Y PE +++ ++ K
Sbjct: 132 VIHRDIKPENLLLGSAGELKIADFGWSVHAPSS-RRTTLCGTLDYLPPE-MIEGRMHDEK 189
Query: 181 ADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQARAIKYQFPQ 240
D+W++G + E P F +++ + ++ +++ FP
Sbjct: 190 VDLWSLGVLCYEFLVGKPPFEA-------------------NTYQETYKRISRVEFTFPD 230
Query: 241 LPRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFF 284
++ A L L +PS+RP E L+HP+
Sbjct: 231 F-----------VTEGARDLISRLLKHNPSQRPMLREVLEHPWI 263
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 97.8 bits (242), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 75/227 (33%), Positives = 121/227 (53%), Gaps = 14/227 (6%)
Query: 1 MDKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKEL-KQRYASWEDCLN-LREVKCLRKLN 58
+D++ K LG G+FGRV TG A+K L KQ+ + + L E + L+ +N
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 100
Query: 59 HSNIVKLKELIQNNNRLYLVFECMECNLYQLMAARDRKL--FSEPEIKAWLFQVFQGLSY 116
+VKL+ ++N+ LY+V E + M + R++ F EP + + Q+ Y
Sbjct: 101 FPFLVKLEFSFKDNSNLYMVMEYVPGGE---MFSHLRRIGRFXEPHARFYAAQIVLTFEY 157
Query: 117 MHQNGFFHRDLKPENLLVS-QGIIKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQSE 175
+H +RDLKPENLL+ QG I++ DFG A+ +K G + G+ Y APEI+L S+
Sbjct: 158 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIIL-SK 214
Query: 176 LYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYK--ICGVLGSPT 220
Y+ D WA+G ++ E+ P F A + Q+Y+ + G + P+
Sbjct: 215 GYNKAVDWWALGVLIYEMAAGYPPF-FADQPIQIYEKIVSGKVRFPS 260
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 97.8 bits (242), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 76/227 (33%), Positives = 121/227 (53%), Gaps = 14/227 (6%)
Query: 1 MDKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKEL-KQRYASWEDCLN-LREVKCLRKLN 58
+D++ K LG G+FGRV TG A+K L KQ+ + + L E + L+ +N
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 100
Query: 59 HSNIVKLKELIQNNNRLYLVFECMECNLYQLMAARDRKL--FSEPEIKAWLFQVFQGLSY 116
+ KL+ ++N+ LY+V ME M + R++ FSEP + + Q+ Y
Sbjct: 101 FPFLTKLEFSFKDNSNLYMV---MEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEY 157
Query: 117 MHQNGFFHRDLKPENLLVS-QGIIKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQSE 175
+H +RDLKPENL++ QG IK+ DFG A+ +K G + G+ Y APEI+L S+
Sbjct: 158 LHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIIL-SK 214
Query: 176 LYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYK--ICGVLGSPT 220
Y+ D WA+G ++ E+ P F A + Q+Y+ + G + P+
Sbjct: 215 GYNKAVDWWALGVLIYEMAAGYPPF-FADQPIQIYEKIVSGKVRFPS 260
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 97.8 bits (242), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 76/227 (33%), Positives = 121/227 (53%), Gaps = 14/227 (6%)
Query: 1 MDKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKEL-KQRYASWEDCLN-LREVKCLRKLN 58
+D++ K LG G+FGRV TG A+K L KQ+ + + L E + L+ +N
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 100
Query: 59 HSNIVKLKELIQNNNRLYLVFECMECNLYQLMAARDRKL--FSEPEIKAWLFQVFQGLSY 116
+ KL+ ++N+ LY+V ME M + R++ FSEP + + Q+ Y
Sbjct: 101 FPFLTKLEFSFKDNSNLYMV---MEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEY 157
Query: 117 MHQNGFFHRDLKPENLLVS-QGIIKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQSE 175
+H +RDLKPENL++ QG IK+ DFG A+ +K G + G+ Y APEI+L S+
Sbjct: 158 LHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIIL-SK 214
Query: 176 LYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYK--ICGVLGSPT 220
Y+ D WA+G ++ E+ P F A + Q+Y+ + G + P+
Sbjct: 215 GYNKAVDWWALGVLIYEMAAGYPPF-FADQPIQIYEKIVSGKVRFPS 260
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 97.8 bits (242), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 77/286 (26%), Positives = 128/286 (44%), Gaps = 48/286 (16%)
Query: 8 KELGRGAFGRVFQAFDEHTGEAVAIKEL---KQRYASWEDCLNLREVKCLRKLNHSNIVK 64
+ LG+G FG V+ A ++++ +A+K L + A E L REV+ L H NI++
Sbjct: 14 RPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLR-REVEIQSHLRHPNILR 72
Query: 65 LKELIQNNNRLYLVFECMECNLYQLMAARDRKL-----FSEPEIKAWLFQVFQGLSYMHQ 119
L ++ R+YL+ E Y + R+L F E ++ ++ LSY H
Sbjct: 73 LYGYFHDSTRVYLILE------YAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 126
Query: 120 NGFFHRDLKPENLLV-SQGIIKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQSELYS 178
HRD+KPENLL+ S G +KIADFG + S G+ Y PE +++ ++
Sbjct: 127 KKVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS-RRAALCGTLDYLPPE-MIEGRMHD 184
Query: 179 SKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQARAIKYQF 238
K D+W++G + E P F +++ D ++ +++ F
Sbjct: 185 EKVDLWSLGVLCYEFLVGKPPFEA-------------------NTYQDTYKRISRVEFTF 225
Query: 239 PQLPRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFF 284
P ++ A L L +PS+RP E L+HP+
Sbjct: 226 PDF-----------VTEGARDLISRLLKHNPSQRPMLREVLEHPWI 260
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 97.8 bits (242), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 77/286 (26%), Positives = 127/286 (44%), Gaps = 48/286 (16%)
Query: 8 KELGRGAFGRVFQAFDEHTGEAVAIKEL---KQRYASWEDCLNLREVKCLRKLNHSNIVK 64
+ LG+G FG V+ A ++ + +A+K L + A E L REV+ L H NI++
Sbjct: 14 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLR-REVEIQSHLRHPNILR 72
Query: 65 LKELIQNNNRLYLVFECMECNLYQLMAARDRKL-----FSEPEIKAWLFQVFQGLSYMHQ 119
L + R+YL+ E Y + R+L F E ++ ++ LSY H
Sbjct: 73 LYGYFHDATRVYLILE------YAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 126
Query: 120 NGFFHRDLKPENLLV-SQGIIKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQSELYS 178
HRD+KPENLL+ S G +KIADFG + S T G+ Y PE +++ ++
Sbjct: 127 KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS-RRTTLCGTLDYLPPE-MIEGRMHD 184
Query: 179 SKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQARAIKYQF 238
K D+W++G + E P F +++ + ++ +++ F
Sbjct: 185 EKVDLWSLGVLCYEFLVGKPPFEA-------------------NTYQETYKRISRVEFTF 225
Query: 239 PQLPRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFF 284
P ++ A L L +PS+RP E L+HP+
Sbjct: 226 PDF-----------VTEGARDLISRLLKHNPSQRPMLREVLEHPWI 260
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 97.8 bits (242), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 88/294 (29%), Positives = 133/294 (45%), Gaps = 42/294 (14%)
Query: 1 MDKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCL--NLREVKCLRKLN 58
M+++ K LG+G FG+V ++ TG A+K LK+ +D + L E + L+
Sbjct: 150 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSR 209
Query: 59 HSNIVKLKELIQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMH 118
H + LK Q ++RL V E +R+R +FSE + + ++ L Y+H
Sbjct: 210 HPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRER-VFSEDRARFYGAEIVSALDYLH 268
Query: 119 -QNGFFHRDLKPENLLVSQ-GIIKIADFGLARE-IKSGPPYTNYVGSRWYRAPEILLQSE 175
+ +RDLK ENL++ + G IKI DFGL +E IK G + G+ Y APE+L ++
Sbjct: 269 SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCGTPEYLAPEVLEDND 328
Query: 176 LYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQARAIK 235
Y D W +G +M E+ +CG L P + D + I
Sbjct: 329 -YGRAVDWWGLGVVMYEM------------------MCGRL--PFYNQ--DHEKLFELIL 365
Query: 236 YQFPQLPRANLSALMPSASQDAISLFESLCSWDPSKR-----PTAAEALQHPFF 284
+ + PR L P A SL L DP +R A E +QH FF
Sbjct: 366 MEEIRFPR----TLGPEAK----SLLSGLLKKDPKQRLGGGSEDAKEIMQHRFF 411
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 72/216 (33%), Positives = 117/216 (54%), Gaps = 12/216 (5%)
Query: 1 MDKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKEL-KQRYASWEDCLN-LREVKCLRKLN 58
+D++ K LG G+FGRV + +G A+K L KQ+ + + L E + L+ +N
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 59 HSNIVKLKELIQNNNRLYLVFECMECNLYQLMAARDRKL--FSEPEIKAWLFQVFQGLSY 116
+VKL+ ++N+ LY+V E + M + R++ F EP + + Q+ Y
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGE---MFSHLRRIGRFXEPHARFYAAQIVLTFEY 156
Query: 117 MHQNGFFHRDLKPENLLVS-QGIIKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQSE 175
+H +RDLKPENLL+ QG I++ DFG A+ +K G + G+ Y APEI+L S+
Sbjct: 157 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIIL-SK 213
Query: 176 LYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYK 211
Y+ D WA+G ++ E+ P F A + Q+Y+
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYPPF-FADQPIQIYE 248
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 74/227 (32%), Positives = 122/227 (53%), Gaps = 14/227 (6%)
Query: 1 MDKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKEL-KQRYASWEDCLN-LREVKCLRKLN 58
+D++ K LG G+FGRV + +G A+K L KQ+ + + L E + L+ +N
Sbjct: 35 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 94
Query: 59 HSNIVKLKELIQNNNRLYLVFECMECNLYQLMAARDRKL--FSEPEIKAWLFQVFQGLSY 116
+VKL+ ++N+ LY+V E + M + R++ F EP + + Q+ Y
Sbjct: 95 FPFLVKLEFSFKDNSNLYMVMEYVAGGE---MFSHLRRIGRFXEPHARFYAAQIVLTFEY 151
Query: 117 MHQNGFFHRDLKPENLLVS-QGIIKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQSE 175
+H +RDLKPENLL+ QG I++ DFG A+ +K G + G+ Y APEI+L S+
Sbjct: 152 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIIL-SK 208
Query: 176 LYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYK--ICGVLGSPT 220
Y+ D WA+G ++ E+ P F A + Q+Y+ + G + P+
Sbjct: 209 GYNKAVDWWALGVLIYEMAAGYPPF-FADQPIQIYEKIVSGKVRFPS 254
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 88/294 (29%), Positives = 133/294 (45%), Gaps = 42/294 (14%)
Query: 1 MDKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCL--NLREVKCLRKLN 58
M+++ K LG+G FG+V ++ TG A+K LK+ +D + L E + L+
Sbjct: 8 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSR 67
Query: 59 HSNIVKLKELIQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMH 118
H + LK Q ++RL V E +R+R +FSE + + ++ L Y+H
Sbjct: 68 HPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRER-VFSEDRARFYGAEIVSALDYLH 126
Query: 119 -QNGFFHRDLKPENLLVSQ-GIIKIADFGLARE-IKSGPPYTNYVGSRWYRAPEILLQSE 175
+ +RDLK ENL++ + G IKI DFGL +E IK G + G+ Y APE+L ++
Sbjct: 127 SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLAPEVLEDND 186
Query: 176 LYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQARAIK 235
Y D W +G +M E+ +CG L P + D + I
Sbjct: 187 -YGRAVDWWGLGVVMYEM------------------MCGRL--PFYNQ--DHEKLFELIL 223
Query: 236 YQFPQLPRANLSALMPSASQDAISLFESLCSWDPSKR-----PTAAEALQHPFF 284
+ + PR L P A SL L DP +R A E +QH FF
Sbjct: 224 MEEIRFPR----TLGPEAK----SLLSGLLKKDPKQRLGGGSEDAKEIMQHRFF 269
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 76/227 (33%), Positives = 121/227 (53%), Gaps = 14/227 (6%)
Query: 1 MDKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKEL-KQRYASWEDCLN-LREVKCLRKLN 58
+D++ K LG G+FGRV TG A+K L KQ+ + + L E + L+ +N
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 59 HSNIVKLKELIQNNNRLYLVFECMECNLYQLMAARDRKL--FSEPEIKAWLFQVFQGLSY 116
+VKL+ ++N+ LY+V ME M + R++ F EP + + Q+ Y
Sbjct: 100 FPFLVKLEFSFKDNSNLYMV---MEYAPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEY 156
Query: 117 MHQNGFFHRDLKPENLLVS-QGIIKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQSE 175
+H +RDLKPENL++ QG IK+ DFG A+ +K G + G+ Y APEI+L S+
Sbjct: 157 LHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIIL-SK 213
Query: 176 LYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYK--ICGVLGSPT 220
Y+ D WA+G ++ E+ P F A + Q+Y+ + G + P+
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYPPF-FADQPIQIYEKIVSGKVRFPS 259
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 77/284 (27%), Positives = 126/284 (44%), Gaps = 48/284 (16%)
Query: 10 LGRGAFGRVFQAFDEHTGEAVAIKEL---KQRYASWEDCLNLREVKCLRKLNHSNIVKLK 66
LG+G FG V+ A ++ + +A+K L + A E L REV+ L H NI++L
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLR-REVEIQSHLRHPNILRLY 79
Query: 67 ELIQNNNRLYLVFECMECNLYQLMAARDRKL-----FSEPEIKAWLFQVFQGLSYMHQNG 121
+ R+YL+ E Y + R+L F E ++ ++ LSY H
Sbjct: 80 GYFHDATRVYLILE------YAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR 133
Query: 122 FFHRDLKPENLLV-SQGIIKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQSELYSSK 180
HRD+KPENLL+ S G +KIADFG + S T G+ Y PE +++ ++ K
Sbjct: 134 VIHRDIKPENLLLGSAGELKIADFGWSVHAPSS-RRTTLCGTLDYLPPE-MIEGRMHDEK 191
Query: 181 ADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQARAIKYQFPQ 240
D+W++G + E P F +++ + ++ +++ FP
Sbjct: 192 VDLWSLGVLCYEFLVGKPPFEA-------------------NTYQETYKRISRVEFTFPD 232
Query: 241 LPRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFF 284
++ A L L +PS+RP E L+HP+
Sbjct: 233 F-----------VTEGARDLISRLLKHNPSQRPMLREVLEHPWI 265
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 77/284 (27%), Positives = 126/284 (44%), Gaps = 48/284 (16%)
Query: 10 LGRGAFGRVFQAFDEHTGEAVAIKEL---KQRYASWEDCLNLREVKCLRKLNHSNIVKLK 66
LG+G FG V+ A ++ + +A+K L + A E L REV+ L H NI++L
Sbjct: 33 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLR-REVEIQSHLRHPNILRLY 91
Query: 67 ELIQNNNRLYLVFECMECNLYQLMAARDRKL-----FSEPEIKAWLFQVFQGLSYMHQNG 121
+ R+YL+ E Y + R+L F E ++ ++ LSY H
Sbjct: 92 GYFHDATRVYLILE------YAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR 145
Query: 122 FFHRDLKPENLLV-SQGIIKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQSELYSSK 180
HRD+KPENLL+ S G +KIADFG + S T G+ Y PE +++ ++ K
Sbjct: 146 VIHRDIKPENLLLGSAGELKIADFGWSVHAPSS-RRTTLCGTLDYLPPE-MIEGRMHDEK 203
Query: 181 ADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQARAIKYQFPQ 240
D+W++G + E P F +++ + ++ +++ FP
Sbjct: 204 VDLWSLGVLCYEFLVGKPPFEA-------------------NTYQETYKRISRVEFTFPD 244
Query: 241 LPRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFF 284
++ A L L +PS+RP E L+HP+
Sbjct: 245 F-----------VTEGARDLISRLLKHNPSQRPMLREVLEHPWI 277
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 77/286 (26%), Positives = 127/286 (44%), Gaps = 48/286 (16%)
Query: 8 KELGRGAFGRVFQAFDEHTGEAVAIKEL---KQRYASWEDCLNLREVKCLRKLNHSNIVK 64
+ LG+G FG V+ A ++ + +A+K L + A E L REV+ L H NI++
Sbjct: 18 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLR-REVEIQSHLRHPNILR 76
Query: 65 LKELIQNNNRLYLVFECMECNLYQLMAARDRKL-----FSEPEIKAWLFQVFQGLSYMHQ 119
L + R+YL+ E Y + R+L F E ++ ++ LSY H
Sbjct: 77 LYGYFHDATRVYLILE------YAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 130
Query: 120 NGFFHRDLKPENLLV-SQGIIKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQSELYS 178
HRD+KPENLL+ S G +KIADFG + S T G+ Y PE +++ ++
Sbjct: 131 KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS-RRTTLCGTLDYLPPE-MIEGRMHD 188
Query: 179 SKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQARAIKYQF 238
K D+W++G + E P F +++ + ++ +++ F
Sbjct: 189 EKVDLWSLGVLCYEFLVGKPPFEA-------------------NTYQETYKRISRVEFTF 229
Query: 239 PQLPRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFF 284
P ++ A L L +PS+RP E L+HP+
Sbjct: 230 PDF-----------VTEGARDLISRLLKHNPSQRPMLREVLEHPWI 264
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 88/294 (29%), Positives = 133/294 (45%), Gaps = 42/294 (14%)
Query: 1 MDKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCL--NLREVKCLRKLN 58
M+++ K LG+G FG+V ++ TG A+K LK+ +D + L E + L+
Sbjct: 9 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSR 68
Query: 59 HSNIVKLKELIQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMH 118
H + LK Q ++RL V E +R+R +FSE + + ++ L Y+H
Sbjct: 69 HPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRER-VFSEDRARFYGAEIVSALDYLH 127
Query: 119 -QNGFFHRDLKPENLLVSQ-GIIKIADFGLARE-IKSGPPYTNYVGSRWYRAPEILLQSE 175
+ +RDLK ENL++ + G IKI DFGL +E IK G + G+ Y APE+L ++
Sbjct: 128 SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLAPEVLEDND 187
Query: 176 LYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQARAIK 235
Y D W +G +M E+ +CG L P + D + I
Sbjct: 188 -YGRAVDWWGLGVVMYEM------------------MCGRL--PFYNQ--DHEKLFELIL 224
Query: 236 YQFPQLPRANLSALMPSASQDAISLFESLCSWDPSKR-----PTAAEALQHPFF 284
+ + PR L P A SL L DP +R A E +QH FF
Sbjct: 225 MEEIRFPR----TLGPEAK----SLLSGLLKKDPKQRLGGGSEDAKEIMQHRFF 270
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 77/286 (26%), Positives = 127/286 (44%), Gaps = 48/286 (16%)
Query: 8 KELGRGAFGRVFQAFDEHTGEAVAIKEL---KQRYASWEDCLNLREVKCLRKLNHSNIVK 64
+ LG+G FG V+ A ++ + +A+K L + A E L REV+ L H NI++
Sbjct: 13 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLR-REVEIQSHLRHPNILR 71
Query: 65 LKELIQNNNRLYLVFECMECNLYQLMAARDRKL-----FSEPEIKAWLFQVFQGLSYMHQ 119
L + R+YL+ E Y + R+L F E ++ ++ LSY H
Sbjct: 72 LYGYFHDATRVYLILE------YAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 125
Query: 120 NGFFHRDLKPENLLV-SQGIIKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQSELYS 178
HRD+KPENLL+ S G +KIADFG + S T G+ Y PE +++ ++
Sbjct: 126 KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS-RRTTLCGTLDYLPPE-MIEGRMHD 183
Query: 179 SKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQARAIKYQF 238
K D+W++G + E P F +++ + ++ +++ F
Sbjct: 184 EKVDLWSLGVLCYEFLVGKPPFEA-------------------NTYQETYKRISRVEFTF 224
Query: 239 PQLPRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFF 284
P ++ A L L +PS+RP E L+HP+
Sbjct: 225 PDF-----------VTEGARDLISRLLKHNPSQRPMLREVLEHPWI 259
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 82/293 (27%), Positives = 131/293 (44%), Gaps = 41/293 (13%)
Query: 1 MDKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCL--NLREVKCLRKLN 58
M+ + K LG+G FG+V ++ TG A+K L++ +D + + E + L+
Sbjct: 4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTR 63
Query: 59 HSNIVKLKELIQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMH 118
H + LK Q ++RL V E +R+R +F+E + + ++ L Y+H
Sbjct: 64 HPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRER-VFTEERARFYGAEIVSALEYLH 122
Query: 119 QNGFFHRDLKPENLLVSQ-GIIKIADFGLARE-IKSGPPYTNYVGSRWYRAPEILLQSEL 176
+RD+K ENL++ + G IKI DFGL +E I G + G+ Y APE+L ++
Sbjct: 123 SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLEDND- 181
Query: 177 YSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQARAIKY 236
Y D W +G +M E+ +CG L P + D R I
Sbjct: 182 YGRAVDWWGLGVVMYEM------------------MCGRL--PFYNQ--DHERLFELILM 219
Query: 237 QFPQLPRANLSALMPSASQDAISLFESLCSWDPSKR-----PTAAEALQHPFF 284
+ + PR + S +A SL L DP +R A E ++H FF
Sbjct: 220 EEIRFPR--------TLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFF 264
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 88/294 (29%), Positives = 133/294 (45%), Gaps = 42/294 (14%)
Query: 1 MDKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCL--NLREVKCLRKLN 58
M+++ K LG+G FG+V ++ TG A+K LK+ +D + L E + L+
Sbjct: 7 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSR 66
Query: 59 HSNIVKLKELIQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMH 118
H + LK Q ++RL V E +R+R +FSE + + ++ L Y+H
Sbjct: 67 HPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRER-VFSEDRARFYGAEIVSALDYLH 125
Query: 119 -QNGFFHRDLKPENLLVSQ-GIIKIADFGLARE-IKSGPPYTNYVGSRWYRAPEILLQSE 175
+ +RDLK ENL++ + G IKI DFGL +E IK G + G+ Y APE+L ++
Sbjct: 126 SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLAPEVLEDND 185
Query: 176 LYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQARAIK 235
Y D W +G +M E+ +CG L P + D + I
Sbjct: 186 -YGRAVDWWGLGVVMYEM------------------MCGRL--PFYNQ--DHEKLFELIL 222
Query: 236 YQFPQLPRANLSALMPSASQDAISLFESLCSWDPSKR-----PTAAEALQHPFF 284
+ + PR L P A SL L DP +R A E +QH FF
Sbjct: 223 MEEIRFPR----TLGPEAK----SLLSGLLKKDPKQRLGGGSEDAKEIMQHRFF 268
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 80/296 (27%), Positives = 136/296 (45%), Gaps = 39/296 (13%)
Query: 1 MDKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQR--YASWEDCLNLREVKCLRKLN 58
M +Y + LG+G F + ++ D T E A K + + + E+ + L+
Sbjct: 41 MKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLD 100
Query: 59 HSNIVKLKELIQNNNRLYLVFE-CMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYM 117
+ ++V ++++ +Y+V E C +L +L + RK +EPE + ++ Q QG+ Y+
Sbjct: 101 NPHVVGFHGFFEDDDFVYVVLEICRRRSLLEL--HKRRKAVTEPEARYFMRQTIQGVQYL 158
Query: 118 HQNGFFHRDLKPENLLVSQGI-IKIADFGLAREIK-SGPPYTNYVGSRWYRAPEILLQSE 175
H N HRDLK NL ++ + +KI DFGLA +I+ G G+ Y APE+L +
Sbjct: 159 HNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKTLCGTPNYIAPEVLCKKG 218
Query: 176 LYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQARAIK 235
+S + D+W++G I+ L P F + + +I + +
Sbjct: 219 -HSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRI-------------------KKNE 258
Query: 236 YQFPQLPRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFFKRCFYAP 291
Y P+ + P AS +L + DP+ RP+ AE L FF YAP
Sbjct: 259 YSVPR-------HINPVAS----ALIRRMLHADPTLRPSVAELLTDEFFTSG-YAP 302
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 77/284 (27%), Positives = 126/284 (44%), Gaps = 48/284 (16%)
Query: 10 LGRGAFGRVFQAFDEHTGEAVAIKEL---KQRYASWEDCLNLREVKCLRKLNHSNIVKLK 66
LG+G FG V+ A ++ + +A+K L + A E L REV+ L H NI++L
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLR-REVEIQSHLRHPNILRLY 74
Query: 67 ELIQNNNRLYLVFECMECNLYQLMAARDRKL-----FSEPEIKAWLFQVFQGLSYMHQNG 121
+ R+YL+ E Y + R+L F E ++ ++ LSY H
Sbjct: 75 GYFHDATRVYLILE------YAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR 128
Query: 122 FFHRDLKPENLLV-SQGIIKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQSELYSSK 180
HRD+KPENLL+ S G +KIADFG + S T G+ Y PE +++ ++ K
Sbjct: 129 VIHRDIKPENLLLGSAGELKIADFGWSVHAPSS-RRTELCGTLDYLPPE-MIEGRMHDEK 186
Query: 181 ADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQARAIKYQFPQ 240
D+W++G + E P F +++ + ++ +++ FP
Sbjct: 187 VDLWSLGVLCYEFLVGKPPFEA-------------------NTYQETYKRISRVEFTFPD 227
Query: 241 LPRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFF 284
++ A L L +PS+RP E L+HP+
Sbjct: 228 F-----------VTEGARDLISRLLKHNPSQRPMLREVLEHPWI 260
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 82/293 (27%), Positives = 131/293 (44%), Gaps = 41/293 (13%)
Query: 1 MDKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCL--NLREVKCLRKLN 58
M+ + K LG+G FG+V ++ TG A+K L++ +D + + E + L+
Sbjct: 4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTR 63
Query: 59 HSNIVKLKELIQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMH 118
H + LK Q ++RL V E +R+R +F+E + + ++ L Y+H
Sbjct: 64 HPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRER-VFTEERARFYGAEIVSALEYLH 122
Query: 119 QNGFFHRDLKPENLLVSQ-GIIKIADFGLARE-IKSGPPYTNYVGSRWYRAPEILLQSEL 176
+RD+K ENL++ + G IKI DFGL +E I G + G+ Y APE+L ++
Sbjct: 123 SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLEDND- 181
Query: 177 YSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQARAIKY 236
Y D W +G +M E+ +CG L P + D R I
Sbjct: 182 YGRAVDWWGLGVVMYEM------------------MCGRL--PFYNQ--DHERLFELILM 219
Query: 237 QFPQLPRANLSALMPSASQDAISLFESLCSWDPSKR-----PTAAEALQHPFF 284
+ + PR + S +A SL L DP +R A E ++H FF
Sbjct: 220 EEIRFPR--------TLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFF 264
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 77/284 (27%), Positives = 126/284 (44%), Gaps = 48/284 (16%)
Query: 10 LGRGAFGRVFQAFDEHTGEAVAIKEL---KQRYASWEDCLNLREVKCLRKLNHSNIVKLK 66
LG+G FG V+ A ++ + +A+K L + A E L REV+ L H NI++L
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLR-REVEIQSHLRHPNILRLY 77
Query: 67 ELIQNNNRLYLVFECMECNLYQLMAARDRKL-----FSEPEIKAWLFQVFQGLSYMHQNG 121
+ R+YL+ E Y + R+L F E ++ ++ LSY H
Sbjct: 78 GYFHDATRVYLILE------YAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR 131
Query: 122 FFHRDLKPENLLV-SQGIIKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQSELYSSK 180
HRD+KPENLL+ S G +KIADFG + S T G+ Y PE +++ ++ K
Sbjct: 132 VIHRDIKPENLLLGSAGELKIADFGWSVHAPSS-RRTTLCGTLDYLPPE-MIEGRMHDEK 189
Query: 181 ADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQARAIKYQFPQ 240
D+W++G + E P F +++ + ++ +++ FP
Sbjct: 190 VDLWSLGVLCYEFLVGKPPFEA-------------------NTYQETYKRISRVEFTFPD 230
Query: 241 LPRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFF 284
++ A L L +PS+RP E L+HP+
Sbjct: 231 F-----------VTEGARDLISRLLKHNPSQRPMLREVLEHPWI 263
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 75/280 (26%), Positives = 126/280 (45%), Gaps = 40/280 (14%)
Query: 10 LGRGAFGRVFQAFDEHTGEAVAIKEL---KQRYASWEDCLNLREVKCLRKLNHSNIVKLK 66
LG+G FG V+ A ++ + +A+K L + A E L REV+ L H NI++L
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLR-REVEIQSHLRHPNILRLY 79
Query: 67 ELIQNNNRLYLVFECM-ECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQNGFFHR 125
+ R+YL+ E +Y+ + + F E ++ ++ LSY H HR
Sbjct: 80 GYFHDATRVYLILEYAPRGEVYKELQKLSK--FDEQRTATYITELANALSYCHSKRVIHR 137
Query: 126 DLKPENLLV-SQGIIKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQSELYSSKADMW 184
D+KPENLL+ S G +KIADFG + S T G+ Y PE +++ ++ K D+W
Sbjct: 138 DIKPENLLLGSAGELKIADFGWSVHAPSS-RRTTLCGTLDYLPPE-MIEGRMHDEKVDLW 195
Query: 185 AMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQARAIKYQFPQLPRA 244
++G + E P F +++ + ++ +++ FP
Sbjct: 196 SLGVLCYEFLVGKPPFEA-------------------NTYQETYKRISRVEFTFPDF--- 233
Query: 245 NLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFF 284
++ A L L +PS+RP E L+HP+
Sbjct: 234 --------VTEGARDLISRLLKHNPSQRPMLREVLEHPWI 265
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 74/227 (32%), Positives = 122/227 (53%), Gaps = 14/227 (6%)
Query: 1 MDKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKEL-KQRYASWEDCLN-LREVKCLRKLN 58
+D++ K LG G+FGRV + +G A+K L KQ+ + + L E + L+ +N
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 59 HSNIVKLKELIQNNNRLYLVFECMECNLYQLMAARDRKL--FSEPEIKAWLFQVFQGLSY 116
+VKL+ ++N+ LY+V E + M + R++ FSEP + + Q+ Y
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGE---MFSHLRRIGRFSEPHARFYAAQIVLTFEY 156
Query: 117 MHQNGFFHRDLKPENLLVS-QGIIKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQSE 175
+H +RDLKPENLL+ QG I++ DFG A+ +K G + G+ Y AP I+L S+
Sbjct: 157 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPAIIL-SK 213
Query: 176 LYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYK--ICGVLGSPT 220
Y+ D WA+G ++ E+ P F A + Q+Y+ + G + P+
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYPPF-FADQPIQIYEKIVSGKVRFPS 259
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 78/283 (27%), Positives = 126/283 (44%), Gaps = 40/283 (14%)
Query: 8 KELGRGAFGRVFQAFDEHTGEAVAIKEL---KQRYASWEDCLNLREVKCLRKLNHSNIVK 64
+ LG+G FG V+ A + + +A+K L + A E L REV+ L H NI++
Sbjct: 18 RPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLR-REVEIQSHLRHPNILR 76
Query: 65 LKELIQNNNRLYLVFECMEC-NLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQNGFF 123
L + R+YL+ E +Y+ + R F E ++ ++ LSY H
Sbjct: 77 LYGYFHDATRVYLILEYAPLGTVYRELQKLSR--FDEQRTATYITELANALSYCHSKRVI 134
Query: 124 HRDLKPENLLV-SQGIIKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQSELYSSKAD 182
HRD+KPENLL+ S G +KIADFG + S T G+ Y PE +++ ++ K D
Sbjct: 135 HRDIKPENLLLGSNGELKIADFGWSVHAPSSRRDT-LCGTLDYLPPE-MIEGRMHDEKVD 192
Query: 183 MWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQARAIKYQFPQLP 242
+W++G + E P F ++ + R+ +++ FP
Sbjct: 193 LWSLGVLCYEFLVGMPPFEA-------------------HTYQETYRRISRVEFTFPDF- 232
Query: 243 RANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFFK 285
++ A L L + S+R T AE L+HP+ K
Sbjct: 233 ----------VTEGARDLISRLLKHNASQRLTLAEVLEHPWIK 265
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 111/205 (54%), Gaps = 11/205 (5%)
Query: 2 DKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLN-LREVKCLRKLNHS 60
D + ELG GAFG+V++A ++ T A K + + S E+ + + E+ L +H
Sbjct: 37 DFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTK--SEEELEDYMVEIDILASCDHP 94
Query: 61 NIVKLKELIQNNNRLYLVFE-CMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQ 119
NIVKL + N L+++ E C + +M +R L +E +I+ Q L+Y+H
Sbjct: 95 NIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPL-TESQIQVVCKQTLDALNYLHD 153
Query: 120 NGFFHRDLKPENLLVS-QGIIKIADFGL-AREIKSGPPYTNYVGSRWYRAPEILL----Q 173
N HRDLK N+L + G IK+ADFG+ A+ ++ +++G+ ++ APE+++ +
Sbjct: 154 NKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDSFIGTPYWMAPEVVMCETSK 213
Query: 174 SELYSSKADMWAMGAIMAELFTFCP 198
Y KAD+W++G + E+ P
Sbjct: 214 DRPYDYKADVWSLGITLIEMAEIEP 238
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 80/296 (27%), Positives = 136/296 (45%), Gaps = 39/296 (13%)
Query: 1 MDKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQR--YASWEDCLNLREVKCLRKLN 58
M +Y + LG+G F + ++ D T E A K + + + E+ + L+
Sbjct: 41 MKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLD 100
Query: 59 HSNIVKLKELIQNNNRLYLVFE-CMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYM 117
+ ++V ++++ +Y+V E C +L +L + RK +EPE + ++ Q QG+ Y+
Sbjct: 101 NPHVVGFHGFFEDDDFVYVVLEICRRRSLLEL--HKRRKAVTEPEARYFMRQTIQGVQYL 158
Query: 118 HQNGFFHRDLKPENLLVSQGI-IKIADFGLAREIK-SGPPYTNYVGSRWYRAPEILLQSE 175
H N HRDLK NL ++ + +KI DFGLA +I+ G G+ Y APE+L +
Sbjct: 159 HNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKXLCGTPNYIAPEVLCKKG 218
Query: 176 LYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQARAIK 235
+S + D+W++G I+ L P F + + +I + +
Sbjct: 219 -HSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRI-------------------KKNE 258
Query: 236 YQFPQLPRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFFKRCFYAP 291
Y P+ + P AS +L + DP+ RP+ AE L FF YAP
Sbjct: 259 YSVPR-------HINPVAS----ALIRRMLHADPTLRPSVAELLTDEFFTSG-YAP 302
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 82/293 (27%), Positives = 131/293 (44%), Gaps = 41/293 (13%)
Query: 1 MDKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCL--NLREVKCLRKLN 58
M+ + K LG+G FG+V ++ TG A+K L++ +D + + E + L+
Sbjct: 9 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTR 68
Query: 59 HSNIVKLKELIQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMH 118
H + LK Q ++RL V E +R+R +F+E + + ++ L Y+H
Sbjct: 69 HPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRER-VFTEERARFYGAEIVSALEYLH 127
Query: 119 QNGFFHRDLKPENLLVSQ-GIIKIADFGLARE-IKSGPPYTNYVGSRWYRAPEILLQSEL 176
+RD+K ENL++ + G IKI DFGL +E I G + G+ Y APE+L ++
Sbjct: 128 SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLEDND- 186
Query: 177 YSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQARAIKY 236
Y D W +G +M E+ +CG L P + D R I
Sbjct: 187 YGRAVDWWGLGVVMYEM------------------MCGRL--PFYNQ--DHERLFELILM 224
Query: 237 QFPQLPRANLSALMPSASQDAISLFESLCSWDPSKR-----PTAAEALQHPFF 284
+ + PR + S +A SL L DP +R A E ++H FF
Sbjct: 225 EEIRFPR--------TLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFF 269
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 107/204 (52%), Gaps = 16/204 (7%)
Query: 7 FKELGRGAFGRV----FQAFDEHTGEAVAIKELKQRYASWEDCLNLREVKCLRKLNHSNI 62
++LG G FG+V + ++TGE VA+K LK +E++ LR L H NI
Sbjct: 26 IRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENI 85
Query: 63 VKLKELIQNN--NRLYLVFECMEC-NLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQ 119
VK K + + N + L+ E + +L + + K+ + ++K + Q+ +G+ Y+
Sbjct: 86 VKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLK-YAVQICKGMDYLGS 144
Query: 120 NGFFHRDLKPENLLV-SQGIIKIADFGLAREIKSGPPYTNYVGSR-----WYRAPEILLQ 173
+ HRDL N+LV S+ +KI DFGL + I++ R WY APE L+Q
Sbjct: 145 RQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWY-APECLMQ 203
Query: 174 SELYSSKADMWAMGAIMAELFTFC 197
S+ Y + +D+W+ G + EL T+C
Sbjct: 204 SKFYIA-SDVWSFGVTLHELLTYC 226
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 77/286 (26%), Positives = 127/286 (44%), Gaps = 48/286 (16%)
Query: 8 KELGRGAFGRVFQAFDEHTGEAVAIKEL---KQRYASWEDCLNLREVKCLRKLNHSNIVK 64
+ LG+G FG V+ A ++ + +A+K L + A E L REV+ L H NI++
Sbjct: 14 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLR-REVEIQSHLRHPNILR 72
Query: 65 LKELIQNNNRLYLVFECMECNLYQLMAARDRKL-----FSEPEIKAWLFQVFQGLSYMHQ 119
L + R+YL+ E Y + R+L F E ++ ++ LSY H
Sbjct: 73 LYGYFHDATRVYLILE------YAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 126
Query: 120 NGFFHRDLKPENLLV-SQGIIKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQSELYS 178
HRD+KPENLL+ S G +KIADFG + S T G+ Y PE +++ ++
Sbjct: 127 KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS-RRTXLCGTLDYLPPE-MIEGRMHD 184
Query: 179 SKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQARAIKYQF 238
K D+W++G + E P F +++ + ++ +++ F
Sbjct: 185 EKVDLWSLGVLCYEFLVGKPPFEA-------------------NTYQETYKRISRVEFTF 225
Query: 239 PQLPRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFF 284
P ++ A L L +PS+RP E L+HP+
Sbjct: 226 PDF-----------VTEGARDLISRLLKHNPSQRPMLREVLEHPWI 260
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 82/293 (27%), Positives = 131/293 (44%), Gaps = 41/293 (13%)
Query: 1 MDKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCL--NLREVKCLRKLN 58
M+ + K LG+G FG+V ++ TG A+K L++ +D + + E + L+
Sbjct: 4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTR 63
Query: 59 HSNIVKLKELIQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMH 118
H + LK Q ++RL V E +R+R +F+E + + ++ L Y+H
Sbjct: 64 HPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRER-VFTEERARFYGAEIVSALEYLH 122
Query: 119 QNGFFHRDLKPENLLVSQ-GIIKIADFGLARE-IKSGPPYTNYVGSRWYRAPEILLQSEL 176
+RD+K ENL++ + G IKI DFGL +E I G + G+ Y APE+L ++
Sbjct: 123 SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLEDND- 181
Query: 177 YSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQARAIKY 236
Y D W +G +M E+ +CG L P + D R I
Sbjct: 182 YGRAVDWWGLGVVMYEM------------------MCGRL--PFYNQ--DHERLFELILM 219
Query: 237 QFPQLPRANLSALMPSASQDAISLFESLCSWDPSKR-----PTAAEALQHPFF 284
+ + PR + S +A SL L DP +R A E ++H FF
Sbjct: 220 EEIRFPR--------TLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFF 264
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 107/204 (52%), Gaps = 16/204 (7%)
Query: 7 FKELGRGAFGRV----FQAFDEHTGEAVAIKELKQRYASWEDCLNLREVKCLRKLNHSNI 62
++LG G FG+V + ++TGE VA+K LK +E++ LR L H NI
Sbjct: 14 IRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENI 73
Query: 63 VKLKELIQNN--NRLYLVFECM-ECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQ 119
VK K + + N + L+ E + +L + + K+ + ++K + Q+ +G+ Y+
Sbjct: 74 VKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLK-YAVQICKGMDYLGS 132
Query: 120 NGFFHRDLKPENLLV-SQGIIKIADFGLAREIKSGPPYTNYVGSR-----WYRAPEILLQ 173
+ HRDL N+LV S+ +KI DFGL + I++ R WY APE L+Q
Sbjct: 133 RQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWY-APECLMQ 191
Query: 174 SELYSSKADMWAMGAIMAELFTFC 197
S+ Y + +D+W+ G + EL T+C
Sbjct: 192 SKFYIA-SDVWSFGVTLHELLTYC 214
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 81/292 (27%), Positives = 129/292 (44%), Gaps = 39/292 (13%)
Query: 10 LGRGAFGRVFQAFDEHTGEAVAIKELKQ-RYASWEDCLNLREVKCLRKLNHSNIVKLKEL 68
LG G G+V Q F++ T E A+K L+ A E L+ R +C +IV++ ++
Sbjct: 70 LGLGINGKVLQIFNKRTQEKFALKXLQDCPKARREVELHWRASQC------PHIVRIVDV 123
Query: 69 IQN----NNRLYLVFECMEC-NLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQNGFF 123
+N L +V EC++ L+ + R + F+E E + + + Y+H
Sbjct: 124 YENLYAGRKCLLIVXECLDGGELFSRIQDRGDQAFTEREASEIXKSIGEAIQYLHSINIA 183
Query: 124 HRDLKPENLLVS----QGIIKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQSELYSS 179
HRD+KPENLL + I+K+ DFG A+E S T + +Y APE+ L E Y
Sbjct: 184 HRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEV-LGPEKYDK 242
Query: 180 KADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQARAIKYQFP 239
D W++G I L P F Y G+ SP + + R +Y+FP
Sbjct: 243 SCDXWSLGVIXYILLCGYPPF---------YSNHGLAISPGXKT------RIRXGQYEFP 287
Query: 240 QLPRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFFKRCFYAP 291
+ S++ L +L +P++R T E HP+ + P
Sbjct: 288 -------NPEWSEVSEEVKXLIRNLLKTEPTQRXTITEFXNHPWIXQSTKVP 332
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 76/286 (26%), Positives = 133/286 (46%), Gaps = 35/286 (12%)
Query: 3 KYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLNLREVKCLRKLNHSNI 62
KY+ F+++G+GA G V+ A D TG+ VAI+++ + ++ + + E+ +R+ + NI
Sbjct: 21 KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELI-INEILVMRENKNPNI 79
Query: 63 VKLKELIQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQNGF 122
V + + L++V E + L E +I A + Q L ++H N
Sbjct: 80 VNYLDSYLVGDELWVVMEYLAGG--SLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQV 137
Query: 123 FHRDLKPENLLVS-QGIIKIADFGLAREIK-SGPPYTNYVGSRWYRAPEILLQSELYSSK 180
HRD+K +N+L+ G +K+ DFG +I + VG+ ++ APE++ + + Y K
Sbjct: 138 IHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTR-KAYGPK 196
Query: 181 ADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQARAIKYQFPQ 240
D+W++G + E+ P + + +Y I G+P + Q P+
Sbjct: 197 VDIWSLGIMAIEMIEGEPPYLNENPLRALYLI-ATNGTPEL---------------QNPE 240
Query: 241 LPRANLSALMPSASQDAISLFESLC-SWDPSKRPTAAEALQHPFFK 285
LSA+ F + C D KR +A E LQH F K
Sbjct: 241 ----KLSAIFRD--------FLNRCLDMDVEKRGSAKELLQHQFLK 274
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 84/289 (29%), Positives = 126/289 (43%), Gaps = 36/289 (12%)
Query: 2 DKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLNLREVKCLRKLNHSN 61
D+Y K++G G FG D+ T E VA+K +++ A E+ RE+ R L H N
Sbjct: 20 DRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAAIDENVQ--REIINHRSLRHPN 77
Query: 62 IVKLKELIQNNNRLYLVFECMEC-NLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQN 120
IV+ KE+I L ++ E LY+ + R FSE E + + Q+ G+SY H
Sbjct: 78 IVRFKEVILTPTHLAIIMEYASGGELYERICNAGR--FSEDEARFFFQQLLSGVSYCHSM 135
Query: 121 GFFHRDLKPENLLVSQGI---IKIADFGLARE--IKSGPPYTNYVGSRWYRAPEILLQSE 175
HRDLK EN L+ +KI DFG ++ + S P T VG+ Y APE+LL+ E
Sbjct: 136 QICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKST--VGTPAYIAPEVLLRQE 193
Query: 176 LYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQARAIK 235
AD+W+ G + + F E K +++ ++K
Sbjct: 194 YDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDYRKT---------------IQRILSVK 238
Query: 236 YQFPQLPRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFF 284
Y P R S + L + DP+ R + E H +F
Sbjct: 239 YSIPDDIR---------ISPECCHLISRIFVADPATRISIPEIKTHSWF 278
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 77/284 (27%), Positives = 126/284 (44%), Gaps = 48/284 (16%)
Query: 10 LGRGAFGRVFQAFDEHTGEAVAIKEL---KQRYASWEDCLNLREVKCLRKLNHSNIVKLK 66
LG+G FG V+ A ++ + +A+K L + A E L REV+ L H NI++L
Sbjct: 17 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLR-REVEIQSHLRHPNILRLY 75
Query: 67 ELIQNNNRLYLVFECMECNLYQLMAARDRKL-----FSEPEIKAWLFQVFQGLSYMHQNG 121
+ R+YL+ E Y + R+L F E ++ ++ LSY H
Sbjct: 76 GYFHDATRVYLILE------YAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR 129
Query: 122 FFHRDLKPENLLV-SQGIIKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQSELYSSK 180
HRD+KPENLL+ S G +KIADFG + S T G+ Y PE +++ ++ K
Sbjct: 130 VIHRDIKPENLLLGSAGELKIADFGWSCHAPSS-RRTTLSGTLDYLPPE-MIEGRMHDEK 187
Query: 181 ADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQARAIKYQFPQ 240
D+W++G + E P F +++ + ++ +++ FP
Sbjct: 188 VDLWSLGVLCYEFLVGKPPFEA-------------------NTYQETYKRISRVEFTFPD 228
Query: 241 LPRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFF 284
++ A L L +PS+RP E L+HP+
Sbjct: 229 F-----------VTEGARDLISRLLKHNPSQRPMLREVLEHPWI 261
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 78/285 (27%), Positives = 127/285 (44%), Gaps = 34/285 (11%)
Query: 4 YSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLNLREVKCLRKLNHSNIV 63
++ +G+G+FG V++ D HT E VAIK + A E +E+ L + + I
Sbjct: 21 FTKLDRIGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYIT 80
Query: 64 KLKELIQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQNGFF 123
+ + +L+++ E + + E I L ++ +GL Y+H
Sbjct: 81 RYFGSYLKSTKLWIIMEYLGGG--SALDLLKPGPLEETYIATILREILKGLDYLHSERKI 138
Query: 124 HRDLKPENLLVS-QGIIKIADFGLAREIKSGPPYTN-YVGSRWYRAPEILLQSELYSSKA 181
HRD+K N+L+S QG +K+ADFG+A ++ N +VG+ ++ APE++ QS Y KA
Sbjct: 139 HRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQSA-YDFKA 197
Query: 182 DMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQARAIKYQFPQL 241
D+W++G EL P P D L R + +
Sbjct: 198 DIWSLGITAIELAKGEP--------------------PNSD-----LHPMRVLFL----I 228
Query: 242 PRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFFKR 286
P+ + L S+ E+ + DP RPTA E L+H F R
Sbjct: 229 PKNSPPTLEGQHSKPFKEFVEACLNKDPRFRPTAKELLKHKFITR 273
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 76/286 (26%), Positives = 133/286 (46%), Gaps = 35/286 (12%)
Query: 3 KYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLNLREVKCLRKLNHSNI 62
KY+ F+++G+GA G V+ A D TG+ VAI+++ + ++ + + E+ +R+ + NI
Sbjct: 21 KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELI-INEILVMRENKNPNI 79
Query: 63 VKLKELIQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQNGF 122
V + + L++V E + L E +I A + Q L ++H N
Sbjct: 80 VNYLDSYLVGDELWVVMEYLAGG--SLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQV 137
Query: 123 FHRDLKPENLLVS-QGIIKIADFGLAREIK-SGPPYTNYVGSRWYRAPEILLQSELYSSK 180
HRD+K +N+L+ G +K+ DFG +I + VG+ ++ APE++ + + Y K
Sbjct: 138 IHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSEMVGTPYWMAPEVVTR-KAYGPK 196
Query: 181 ADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQARAIKYQFPQ 240
D+W++G + E+ P + + +Y I G+P + Q P+
Sbjct: 197 VDIWSLGIMAIEMIEGEPPYLNENPLRALYLI-ATNGTPEL---------------QNPE 240
Query: 241 LPRANLSALMPSASQDAISLFESLC-SWDPSKRPTAAEALQHPFFK 285
LSA+ F + C D KR +A E LQH F K
Sbjct: 241 ----KLSAIFRD--------FLNRCLDMDVEKRGSAKELLQHQFLK 274
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 90/336 (26%), Positives = 146/336 (43%), Gaps = 78/336 (23%)
Query: 3 KYSGFKELGRGAFGRVFQAFDEHTGEAVAIKEL---KQRYASWEDCLNLR-EVKCLRKLN 58
KY +G+G++G V A + T AIK + K R + +D ++ EV+ ++KL+
Sbjct: 27 KYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLH 86
Query: 59 HSNIVKLKELIQNNNRLYLVFE---------------------------------CMECN 85
H NI +L E+ ++ + LV E C ECN
Sbjct: 87 HPNIARLYEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECN 146
Query: 86 LYQLMAA----RDRKLFSEPE--IKAWLFQVFQGLSYMHQNGFFHRDLKPENLLVSQGI- 138
+ + R+ F + E I + Q+F L Y+H G HRD+KPEN L S
Sbjct: 147 EEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHNQGICHRDIKPENFLFSTNKS 206
Query: 139 --IKIADFGLARE---IKSGPPY--TNYVGSRWYRAPEIL-LQSELYSSKADMWAMGAIM 190
IK+ DFGL++E + +G Y T G+ ++ APE+L +E Y K D W+ G ++
Sbjct: 207 FEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSAGVLL 266
Query: 191 AELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQARAIKYQFPQLPRANLSALM 250
L FPG ++AD + ++ + + ++ P N + L
Sbjct: 267 HLLLMGAVPFPGVNDADTISQVLN-----------------KKLCFENP-----NYNVLS 304
Query: 251 PSASQDAISLFESLCSWDPSKRPTAAEALQHPFFKR 286
P A L +L + + +R A ALQHP+ +
Sbjct: 305 PLAR----DLLSNLLNRNVDERFDAMRALQHPWISQ 336
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 74/227 (32%), Positives = 122/227 (53%), Gaps = 14/227 (6%)
Query: 1 MDKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKEL-KQRYASWEDCLN-LREVKCLRKLN 58
+D++ K LG G+FGRV + +G A+K L KQ+ + + L E + L+ +N
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 59 HSNIVKLKELIQNNNRLYLVFECMECNLYQLMAARDRKL--FSEPEIKAWLFQVFQGLSY 116
+VKL+ ++N+ LY+V E + M + R++ FSEP + + Q+ Y
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGE---MFSHLRRIGRFSEPHARFYAAQIVLTFEY 156
Query: 117 MHQNGFFHRDLKPENLLVS-QGIIKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQSE 175
+H +RDLKPENLL+ QG I++ DFG A+ +K G + G+ APEI+L S+
Sbjct: 157 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEALAPEIIL-SK 213
Query: 176 LYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYK--ICGVLGSPT 220
Y+ D WA+G ++ E+ P F A + Q+Y+ + G + P+
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYPPF-FADQPIQIYEKIVSGKVRFPS 259
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 77/286 (26%), Positives = 126/286 (44%), Gaps = 48/286 (16%)
Query: 8 KELGRGAFGRVFQAFDEHTGEAVAIKEL---KQRYASWEDCLNLREVKCLRKLNHSNIVK 64
+ LG+G FG V+ A ++ +A+K L + A E L REV+ L H NI++
Sbjct: 11 RPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLR-REVEIQSHLRHPNILR 69
Query: 65 LKELIQNNNRLYLVFECMECNLYQLMAARDRKL-----FSEPEIKAWLFQVFQGLSYMHQ 119
L + R+YL+ E Y + R+L F E ++ ++ LSY H
Sbjct: 70 LYGYFHDATRVYLILE------YAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 123
Query: 120 NGFFHRDLKPENLLV-SQGIIKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQSELYS 178
HRD+KPENLL+ S G +KIADFG + S T G+ Y PE +++ ++
Sbjct: 124 KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS-RRTTLCGTLDYLPPE-MIEGRMHD 181
Query: 179 SKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQARAIKYQF 238
K D+W++G + E P F +++ + ++ +++ F
Sbjct: 182 EKVDLWSLGVLCYEFLVGKPPFEA-------------------NTYQETYKRISRVEFTF 222
Query: 239 PQLPRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFF 284
P ++ A L L +PS+RP E L+HP+
Sbjct: 223 PDF-----------VTEGARDLISRLLKHNPSQRPMLREVLEHPWI 257
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 110/205 (53%), Gaps = 11/205 (5%)
Query: 2 DKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLN-LREVKCLRKLNHS 60
D + ELG GAFG+V++A ++ T A K + + S E+ + + E+ L +H
Sbjct: 37 DFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTK--SEEELEDYMVEIDILASCDHP 94
Query: 61 NIVKLKELIQNNNRLYLVFE-CMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQ 119
NIVKL + N L+++ E C + +M +R L +E +I+ Q L+Y+H
Sbjct: 95 NIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPL-TESQIQVVCKQTLDALNYLHD 153
Query: 120 NGFFHRDLKPENLLVS-QGIIKIADFGL-AREIKSGPPYTNYVGSRWYRAPEILL----Q 173
N HRDLK N+L + G IK+ADFG+ A+ + +++G+ ++ APE+++ +
Sbjct: 154 NKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDSFIGTPYWMAPEVVMCETSK 213
Query: 174 SELYSSKADMWAMGAIMAELFTFCP 198
Y KAD+W++G + E+ P
Sbjct: 214 DRPYDYKADVWSLGITLIEMAEIEP 238
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 80/302 (26%), Positives = 133/302 (44%), Gaps = 45/302 (14%)
Query: 1 MDKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCL--NLREVKCLR-KL 57
+D + + LG+G+FG+V A + TG+ A+K LK+ +D + + E + L
Sbjct: 22 IDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLAR 81
Query: 58 NHSNIVKLKELIQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYM 117
NH + +L Q +RL+ V E + + R+ F E + + ++ L ++
Sbjct: 82 NHPFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQKSRR-FDEARARFYAAEIISALMFL 140
Query: 118 HQNGFFHRDLKPENLLVS-QGIIKIADFGLARE-IKSGPPYTNYVGSRWYRAPEILLQSE 175
H G +RDLK +N+L+ +G K+ADFG+ +E I +G + G+ Y APEI LQ
Sbjct: 141 HDKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNGVTTATFCGTPDYIAPEI-LQEM 199
Query: 176 LYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQARAIK 235
LY D WAMG ++ E+ F +E D I
Sbjct: 200 LYGPAVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAIL---------------------- 237
Query: 236 YQFPQLPRANLSALMPS-ASQDAISLFESLCSWDPSKRPTAAE------ALQHPFFKRCF 288
N + P+ +DA + +S + +P+ R + L+HPFFK
Sbjct: 238 ---------NDEVVYPTWLHEDATGILKSFMTKNPTMRLGSLTQGGEHAILRHPFFKEID 288
Query: 289 YA 290
+A
Sbjct: 289 WA 290
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 75/227 (33%), Positives = 120/227 (52%), Gaps = 14/227 (6%)
Query: 1 MDKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKEL-KQRYASWEDCLN-LREVKCLRKLN 58
+D++ K LG G+FGRV TG A+K L KQ+ + + L E + L+ +N
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 100
Query: 59 HSNIVKLKELIQNNNRLYLVFECMECNLYQLMAARDRKL--FSEPEIKAWLFQVFQGLSY 116
+ KL+ ++N+ LY+V ME M + R++ F EP + + Q+ Y
Sbjct: 101 FPFLTKLEFSFKDNSNLYMV---MEYAPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEY 157
Query: 117 MHQNGFFHRDLKPENLLVS-QGIIKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQSE 175
+H +RDLKPENL++ QG IK+ DFG A+ +K G + G+ Y APEI+L S+
Sbjct: 158 LHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIIL-SK 214
Query: 176 LYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYK--ICGVLGSPT 220
Y+ D WA+G ++ E+ P F A + Q+Y+ + G + P+
Sbjct: 215 GYNKAVDWWALGVLIYEMAAGYPPF-FADQPIQIYEKIVSGKVRFPS 260
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 76/284 (26%), Positives = 126/284 (44%), Gaps = 48/284 (16%)
Query: 10 LGRGAFGRVFQAFDEHTGEAVAIKEL---KQRYASWEDCLNLREVKCLRKLNHSNIVKLK 66
LG+G FG V+ A ++ + +A+K L + A E L REV+ L H NI++L
Sbjct: 42 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLR-REVEIQSHLRHPNILRLY 100
Query: 67 ELIQNNNRLYLVFECMECNLYQLMAARDRKL-----FSEPEIKAWLFQVFQGLSYMHQNG 121
+ R+YL+ E Y + R+L F E ++ ++ LSY H
Sbjct: 101 GYFHDATRVYLILE------YAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR 154
Query: 122 FFHRDLKPENLLV-SQGIIKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQSELYSSK 180
HRD+KPENLL+ S G +KIADFG + S + G+ Y PE +++ ++ K
Sbjct: 155 VIHRDIKPENLLLGSAGELKIADFGWSVHAPSS-RRDDLCGTLDYLPPE-MIEGRMHDEK 212
Query: 181 ADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQARAIKYQFPQ 240
D+W++G + E P F +++ + ++ +++ FP
Sbjct: 213 VDLWSLGVLCYEFLVGKPPFEA-------------------NTYQETYKRISRVEFTFPD 253
Query: 241 LPRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFF 284
++ A L L +PS+RP E L+HP+
Sbjct: 254 F-----------VTEGARDLISRLLKHNPSQRPMLREVLEHPWI 286
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 77/284 (27%), Positives = 126/284 (44%), Gaps = 48/284 (16%)
Query: 10 LGRGAFGRVFQAFDEHTGEAVAIKEL---KQRYASWEDCLNLREVKCLRKLNHSNIVKLK 66
LG+G FG V+ A ++ + +A+K L + A E L REV+ L H NI++L
Sbjct: 17 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLR-REVEIQSHLRHPNILRLY 75
Query: 67 ELIQNNNRLYLVFECMECNLYQLMAARDRKL-----FSEPEIKAWLFQVFQGLSYMHQNG 121
+ R+YL+ E Y + R+L F E ++ ++ LSY H
Sbjct: 76 GYFHDATRVYLILE------YAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR 129
Query: 122 FFHRDLKPENLLV-SQGIIKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQSELYSSK 180
HRD+KPENLL+ S G +KIADFG + S T G+ Y PE +++ ++ K
Sbjct: 130 VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDT-LCGTLDYLPPE-MIEGRMHDEK 187
Query: 181 ADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQARAIKYQFPQ 240
D+W++G + E P F +++ + ++ +++ FP
Sbjct: 188 VDLWSLGVLCYEFLVGKPPFEA-------------------NTYQETYKRISRVEFTFPD 228
Query: 241 LPRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFF 284
++ A L L +PS+RP E L+HP+
Sbjct: 229 F-----------VTEGARDLISRLLKHNPSQRPMLREVLEHPWI 261
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 76/284 (26%), Positives = 126/284 (44%), Gaps = 48/284 (16%)
Query: 10 LGRGAFGRVFQAFDEHTGEAVAIKEL---KQRYASWEDCLNLREVKCLRKLNHSNIVKLK 66
LG+G FG V+ A ++ + +A+K L + A E L REV+ L H NI++L
Sbjct: 18 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLR-REVEIQSHLRHPNILRLY 76
Query: 67 ELIQNNNRLYLVFECMECNLYQLMAARDRKL-----FSEPEIKAWLFQVFQGLSYMHQNG 121
+ R+YL+ E Y + R+L F E ++ ++ LSY H
Sbjct: 77 GYFHDATRVYLILE------YAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR 130
Query: 122 FFHRDLKPENLLV-SQGIIKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQSELYSSK 180
HRD+KPENLL+ S G +KIA+FG + S T G+ Y PE +++ ++ K
Sbjct: 131 VIHRDIKPENLLLGSAGELKIANFGWSVHAPSS-RRTTLCGTLDYLPPE-MIEGRMHDEK 188
Query: 181 ADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQARAIKYQFPQ 240
D+W++G + E P F +++ + ++ +++ FP
Sbjct: 189 VDLWSLGVLCYEFLVGKPPFEA-------------------NTYQETYKRISRVEFTFPD 229
Query: 241 LPRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFF 284
++ A L L +PS+RP E L+HP+
Sbjct: 230 F-----------VTEGARDLISRLLKHNPSQRPMLREVLEHPWI 262
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 76/286 (26%), Positives = 127/286 (44%), Gaps = 48/286 (16%)
Query: 8 KELGRGAFGRVFQAFDEHTGEAVAIKEL---KQRYASWEDCLNLREVKCLRKLNHSNIVK 64
+ LG+G FG V+ A ++ + +A+K L + A E L REV+ L H NI++
Sbjct: 17 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLR-REVEIQSHLRHPNILR 75
Query: 65 LKELIQNNNRLYLVFECMECNLYQLMAARDRKL-----FSEPEIKAWLFQVFQGLSYMHQ 119
L + R+YL+ E Y + R+L F E ++ ++ LSY H
Sbjct: 76 LYGYFHDATRVYLILE------YAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 129
Query: 120 NGFFHRDLKPENLLV-SQGIIKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQSELYS 178
HRD+KPENLL+ S G +KIADFG + S + G+ Y PE +++ ++
Sbjct: 130 KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS-RRDDLCGTLDYLPPE-MIEGRMHD 187
Query: 179 SKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQARAIKYQF 238
K D+W++G + E P F +++ + ++ +++ F
Sbjct: 188 EKVDLWSLGVLCYEFLVGKPPFEA-------------------NTYQETYKRISRVEFTF 228
Query: 239 PQLPRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFF 284
P ++ A L L +PS+RP E L+HP+
Sbjct: 229 PDF-----------VTEGARDLISRLLKHNPSQRPMLREVLEHPWI 263
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 76/286 (26%), Positives = 133/286 (46%), Gaps = 35/286 (12%)
Query: 3 KYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLNLREVKCLRKLNHSNI 62
KY+ F+++G+GA G V+ A D TG+ VAI+++ + ++ + + E+ +R+ + NI
Sbjct: 21 KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELI-INEILVMRENKNPNI 79
Query: 63 VKLKELIQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQNGF 122
V + + L++V E + L E +I A + Q L ++H N
Sbjct: 80 VNYLDSYLVGDELWVVMEYLAGG--SLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQV 137
Query: 123 FHRDLKPENLLVS-QGIIKIADFGLAREIK-SGPPYTNYVGSRWYRAPEILLQSELYSSK 180
HRD+K +N+L+ G +K+ DFG +I + VG+ ++ APE++ + + Y K
Sbjct: 138 IHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMVGTPYWMAPEVVTR-KAYGPK 196
Query: 181 ADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQARAIKYQFPQ 240
D+W++G + E+ P + + +Y I G+P + Q P+
Sbjct: 197 VDIWSLGIMAIEMIEGEPPYLNENPLRALYLI-ATNGTPEL---------------QNPE 240
Query: 241 LPRANLSALMPSASQDAISLFESLC-SWDPSKRPTAAEALQHPFFK 285
LSA+ F + C D KR +A E LQH F K
Sbjct: 241 ----KLSAIFRD--------FLNRCLEMDVEKRGSAKELLQHQFLK 274
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 76/284 (26%), Positives = 126/284 (44%), Gaps = 48/284 (16%)
Query: 10 LGRGAFGRVFQAFDEHTGEAVAIKEL---KQRYASWEDCLNLREVKCLRKLNHSNIVKLK 66
LG+G FG V+ A ++ + +A+K L + A E L REV+ L H NI++L
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLR-REVEIQSHLRHPNILRLY 77
Query: 67 ELIQNNNRLYLVFECMECNLYQLMAARDRKL-----FSEPEIKAWLFQVFQGLSYMHQNG 121
+ R+YL+ E Y + R+L F E ++ ++ LSY H
Sbjct: 78 GYFHDATRVYLILE------YAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR 131
Query: 122 FFHRDLKPENLLV-SQGIIKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQSELYSSK 180
HRD+KPENLL+ S G +KIA+FG + S T G+ Y PE +++ ++ K
Sbjct: 132 VIHRDIKPENLLLGSAGELKIANFGWSVHAPSS-RRTTLCGTLDYLPPE-MIEGRMHDEK 189
Query: 181 ADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQARAIKYQFPQ 240
D+W++G + E P F +++ + ++ +++ FP
Sbjct: 190 VDLWSLGVLCYEFLVGKPPFEA-------------------NTYQETYKRISRVEFTFPD 230
Query: 241 LPRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFF 284
++ A L L +PS+RP E L+HP+
Sbjct: 231 F-----------VTEGARDLISRLLKHNPSQRPMLREVLEHPWI 263
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 109/205 (53%), Gaps = 11/205 (5%)
Query: 2 DKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLN-LREVKCLRKLNHS 60
D + ELG GAFG+V++A ++ T A K + + S E+ + + E+ L +H
Sbjct: 37 DFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTK--SEEELEDYMVEIDILASCDHP 94
Query: 61 NIVKLKELIQNNNRLYLVFE-CMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQ 119
NIVKL + N L+++ E C + +M +R L +E +I+ Q L+Y+H
Sbjct: 95 NIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPL-TESQIQVVCKQTLDALNYLHD 153
Query: 120 NGFFHRDLKPENLLVS-QGIIKIADFGL-AREIKSGPPYTNYVGSRWYRAPEILL----Q 173
N HRDLK N+L + G IK+ADFG+ A+ + ++G+ ++ APE+++ +
Sbjct: 154 NKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDXFIGTPYWMAPEVVMCETSK 213
Query: 174 SELYSSKADMWAMGAIMAELFTFCP 198
Y KAD+W++G + E+ P
Sbjct: 214 DRPYDYKADVWSLGITLIEMAEIEP 238
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 95.1 bits (235), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 77/284 (27%), Positives = 124/284 (43%), Gaps = 48/284 (16%)
Query: 10 LGRGAFGRVFQAFDEHTGEAVAIKEL---KQRYASWEDCLNLREVKCLRKLNHSNIVKLK 66
LG+G FG V+ A ++ + +A+K L + A E L REV+ L H NI++L
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLR-REVEIQSHLRHPNILRLY 79
Query: 67 ELIQNNNRLYLVFECMECNLYQLMAARDRKL-----FSEPEIKAWLFQVFQGLSYMHQNG 121
+ R+YL+ E Y + R+L F E ++ ++ LSY H
Sbjct: 80 GYFHDATRVYLILE------YAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR 133
Query: 122 FFHRDLKPENLLV-SQGIIKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQSELYSSK 180
HRD+KPENLL+ S G +KIADFG + S T G+ Y PE ++ + K
Sbjct: 134 VIHRDIKPENLLLGSAGELKIADFGWSVHAPSS-RRTTLCGTLDYLPPEX-IEGRXHDEK 191
Query: 181 ADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQARAIKYQFPQ 240
D+W++G + E P F +++ + ++ +++ FP
Sbjct: 192 VDLWSLGVLCYEFLVGKPPFEA-------------------NTYQETYKRISRVEFTFPD 232
Query: 241 LPRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFF 284
++ A L L +PS+RP E L+HP+
Sbjct: 233 F-----------VTEGARDLISRLLKHNPSQRPXLREVLEHPWI 265
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 95.1 bits (235), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 75/286 (26%), Positives = 133/286 (46%), Gaps = 35/286 (12%)
Query: 3 KYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLNLREVKCLRKLNHSNI 62
KY+ F+++G+GA G V+ A D TG+ VAI+++ + ++ + + E+ +R+ + NI
Sbjct: 22 KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELI-INEILVMRENKNPNI 80
Query: 63 VKLKELIQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQNGF 122
V + + L++V E + L E +I A + Q L ++H N
Sbjct: 81 VNYLDSYLVGDELWVVMEYLAGG--SLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQV 138
Query: 123 FHRDLKPENLLVS-QGIIKIADFGLAREIK-SGPPYTNYVGSRWYRAPEILLQSELYSSK 180
HRD+K +N+L+ G +K+ DFG +I + VG+ ++ APE++ + + Y K
Sbjct: 139 IHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMVGTPYWMAPEVVTR-KAYGPK 197
Query: 181 ADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQARAIKYQFPQ 240
D+W++G + E+ P + + +Y I G+P + Q P+
Sbjct: 198 VDIWSLGIMAIEMIEGEPPYLNENPLRALYLI-ATNGTPEL---------------QNPE 241
Query: 241 LPRANLSALMPSASQDAISLFESLC-SWDPSKRPTAAEALQHPFFK 285
LSA+ F + C D KR +A E +QH F K
Sbjct: 242 ----KLSAIFRD--------FLNRCLEMDVEKRGSAKELIQHQFLK 275
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 95.1 bits (235), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 66/205 (32%), Positives = 107/205 (52%), Gaps = 19/205 (9%)
Query: 1 MDKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDC-LNLREVKCLRK-LN 58
++ + + LG GA+G V A + T EAVA+K + + A DC N+++ C+ K LN
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV--DCPENIKKEICINKMLN 63
Query: 59 HSNIVKLKELIQNNNRLYLVFECMECNLYQLMAARDRKL-FSEPEIKAWLFQVFQGLSYM 117
H N+VK + N YL E C+ +L + + EP+ + + Q+ G+ Y+
Sbjct: 64 HENVVKFYGHRREGNIQYLFLEY--CSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYL 121
Query: 118 HQNGFFHRDLKPENLLVSQ-GIIKIADFGLAREIKSGPPYTN-------YVGSRWYRAPE 169
H G HRD+KPENLL+ + +KI+DFGLA + Y N G+ Y APE
Sbjct: 122 HGIGITHRDIKPENLLLDERDNLKISDFGLATVFR----YNNRERLLNKMCGTLPYVAPE 177
Query: 170 ILLQSELYSSKADMWAMGAIMAELF 194
+L + E ++ D+W+ G ++ +
Sbjct: 178 LLKRREFHAEPVDVWSCGIVLTAML 202
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 95.1 bits (235), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 74/280 (26%), Positives = 125/280 (44%), Gaps = 40/280 (14%)
Query: 10 LGRGAFGRVFQAFDEHTGEAVAIKEL---KQRYASWEDCLNLREVKCLRKLNHSNIVKLK 66
LG+G FG V+ A ++ + +A+K L + A E L REV+ L H NI++L
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLR-REVEIQSHLRHPNILRLY 79
Query: 67 ELIQNNNRLYLVFECM-ECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQNGFFHR 125
+ R+YL+ E +Y+ + + F E ++ ++ LSY H HR
Sbjct: 80 GYFHDATRVYLILEYAPRGEVYKELQKLSK--FDEQRTATYITELANALSYCHSKRVIHR 137
Query: 126 DLKPENLLV-SQGIIKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQSELYSSKADMW 184
D+KPENLL+ S G +KIADFG + S G+ Y PE +++ ++ K D+W
Sbjct: 138 DIKPENLLLGSAGELKIADFGWSVHAPSS-RRXXLXGTLDYLPPE-MIEGRMHDEKVDLW 195
Query: 185 AMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQARAIKYQFPQLPRA 244
++G + E P F +++ + ++ +++ FP
Sbjct: 196 SLGVLCYEFLVGKPPFEA-------------------NTYQETYKRISRVEFTFPDF--- 233
Query: 245 NLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFF 284
++ A L L +PS+RP E L+HP+
Sbjct: 234 --------VTEGARDLISRLLKHNPSQRPMLREVLEHPWI 265
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 94.7 bits (234), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 76/284 (26%), Positives = 125/284 (44%), Gaps = 48/284 (16%)
Query: 10 LGRGAFGRVFQAFDEHTGEAVAIKEL---KQRYASWEDCLNLREVKCLRKLNHSNIVKLK 66
LG+G FG V+ A ++ + +A+K L + A E L REV+ L H NI++L
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLR-REVEIQSHLRHPNILRLY 77
Query: 67 ELIQNNNRLYLVFECMECNLYQLMAARDRKL-----FSEPEIKAWLFQVFQGLSYMHQNG 121
+ R+YL+ E Y + R+L F E ++ ++ LSY H
Sbjct: 78 GYFHDATRVYLILE------YAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR 131
Query: 122 FFHRDLKPENLLV-SQGIIKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQSELYSSK 180
HRD+KPENLL+ S G +KIADFG + S G+ Y PE +++ ++ K
Sbjct: 132 VIHRDIKPENLLLGSAGELKIADFGWSVHAPSS-RRAALCGTLDYLPPE-MIEGRMHDEK 189
Query: 181 ADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQARAIKYQFPQ 240
D+W++G + E P F +++ + ++ +++ FP
Sbjct: 190 VDLWSLGVLCYEFLVGKPPFEA-------------------NTYQETYKRISRVEFTFPD 230
Query: 241 LPRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFF 284
++ A L L +PS+RP E L+HP+
Sbjct: 231 F-----------VTEGARDLISRLLKHNPSQRPMLREVLEHPWI 263
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 94.7 bits (234), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 76/286 (26%), Positives = 126/286 (44%), Gaps = 48/286 (16%)
Query: 8 KELGRGAFGRVFQAFDEHTGEAVAIKEL---KQRYASWEDCLNLREVKCLRKLNHSNIVK 64
+ LG+G FG V+ A ++ + +A+K L + A E L REV+ L H NI++
Sbjct: 14 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLR-REVEIQSHLRHPNILR 72
Query: 65 LKELIQNNNRLYLVFECMECNLYQLMAARDRKL-----FSEPEIKAWLFQVFQGLSYMHQ 119
L + R+YL+ E Y + R+L F E ++ ++ LSY H
Sbjct: 73 LYGYFHDATRVYLILE------YAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 126
Query: 120 NGFFHRDLKPENLLV-SQGIIKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQSELYS 178
HRD+KPENLL+ S G +KIADFG + S G+ Y PE +++ ++
Sbjct: 127 KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS-RRXXLCGTLDYLPPE-MIEGRMHD 184
Query: 179 SKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQARAIKYQF 238
K D+W++G + E P F +++ + ++ +++ F
Sbjct: 185 EKVDLWSLGVLCYEFLVGKPPFEA-------------------NTYQETYKRISRVEFTF 225
Query: 239 PQLPRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFF 284
P ++ A L L +PS+RP E L+HP+
Sbjct: 226 PDF-----------VTEGARDLISRLLKHNPSQRPMLREVLEHPWI 260
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 94.7 bits (234), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 76/284 (26%), Positives = 125/284 (44%), Gaps = 48/284 (16%)
Query: 10 LGRGAFGRVFQAFDEHTGEAVAIKEL---KQRYASWEDCLNLREVKCLRKLNHSNIVKLK 66
LG+G FG V+ A ++ + +A+K L + A E L REV+ L H NI++L
Sbjct: 18 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLR-REVEIQSHLRHPNILRLY 76
Query: 67 ELIQNNNRLYLVFECMECNLYQLMAARDRKL-----FSEPEIKAWLFQVFQGLSYMHQNG 121
+ R+YL+ E Y + R+L F E ++ ++ LSY H
Sbjct: 77 GYFHDATRVYLILE------YAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR 130
Query: 122 FFHRDLKPENLLV-SQGIIKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQSELYSSK 180
HRD+KPENLL+ S G +KIADFG + S G+ Y PE +++ ++ K
Sbjct: 131 VIHRDIKPENLLLGSAGELKIADFGWSVHAPSS-RRXXLCGTLDYLPPE-MIEGRMHDEK 188
Query: 181 ADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQARAIKYQFPQ 240
D+W++G + E P F +++ + ++ +++ FP
Sbjct: 189 VDLWSLGVLCYEFLVGKPPFEA-------------------NTYQETYKRISRVEFTFPD 229
Query: 241 LPRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFF 284
++ A L L +PS+RP E L+HP+
Sbjct: 230 F-----------VTEGARDLISRLLKHNPSQRPMLREVLEHPWI 262
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 94.7 bits (234), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 66/205 (32%), Positives = 107/205 (52%), Gaps = 19/205 (9%)
Query: 1 MDKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDC-LNLREVKCLRK-LN 58
++ + + LG GA+G V A + T EAVA+K + + A DC N+++ C+ K LN
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV--DCPENIKKEICINKMLN 62
Query: 59 HSNIVKLKELIQNNNRLYLVFECMECNLYQLMAARDRKL-FSEPEIKAWLFQVFQGLSYM 117
H N+VK + N YL E C+ +L + + EP+ + + Q+ G+ Y+
Sbjct: 63 HENVVKFYGHRREGNIQYLFLEY--CSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYL 120
Query: 118 HQNGFFHRDLKPENLLVSQ-GIIKIADFGLAREIKSGPPYTN-------YVGSRWYRAPE 169
H G HRD+KPENLL+ + +KI+DFGLA + Y N G+ Y APE
Sbjct: 121 HGIGITHRDIKPENLLLDERDNLKISDFGLATVFR----YNNRERLLNKMCGTLPYVAPE 176
Query: 170 ILLQSELYSSKADMWAMGAIMAELF 194
+L + E ++ D+W+ G ++ +
Sbjct: 177 LLKRREFHAEPVDVWSCGIVLTAML 201
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 94.7 bits (234), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 76/284 (26%), Positives = 125/284 (44%), Gaps = 48/284 (16%)
Query: 10 LGRGAFGRVFQAFDEHTGEAVAIKEL---KQRYASWEDCLNLREVKCLRKLNHSNIVKLK 66
LG+G FG V+ A ++ + +A+K L + A E L REV+ L H NI++L
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLR-REVEIQSHLRHPNILRLY 77
Query: 67 ELIQNNNRLYLVFECMECNLYQLMAARDRKL-----FSEPEIKAWLFQVFQGLSYMHQNG 121
+ R+YL+ E Y + R+L F E ++ ++ LSY H
Sbjct: 78 GYFHDATRVYLILE------YAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR 131
Query: 122 FFHRDLKPENLLV-SQGIIKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQSELYSSK 180
HRD+KPENLL+ S G +KIADFG + S G+ Y PE +++ ++ K
Sbjct: 132 VIHRDIKPENLLLGSAGELKIADFGWSVHAPSS-RRXXLCGTLDYLPPE-MIEGRMHDEK 189
Query: 181 ADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQARAIKYQFPQ 240
D+W++G + E P F +++ + ++ +++ FP
Sbjct: 190 VDLWSLGVLCYEFLVGKPPFEA-------------------NTYQETYKRISRVEFTFPD 230
Query: 241 LPRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFF 284
++ A L L +PS+RP E L+HP+
Sbjct: 231 F-----------VTEGARDLISRLLKHNPSQRPMLREVLEHPWI 263
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 94.7 bits (234), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 76/286 (26%), Positives = 126/286 (44%), Gaps = 48/286 (16%)
Query: 8 KELGRGAFGRVFQAFDEHTGEAVAIKEL---KQRYASWEDCLNLREVKCLRKLNHSNIVK 64
+ LG+G FG V+ A ++ + +A+K L + A E L REV+ L H NI++
Sbjct: 14 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLR-REVEIQSHLRHPNILR 72
Query: 65 LKELIQNNNRLYLVFECMECNLYQLMAARDRKL-----FSEPEIKAWLFQVFQGLSYMHQ 119
L + R+YL+ E Y + R+L F E ++ ++ LSY H
Sbjct: 73 LYGYFHDATRVYLILE------YAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 126
Query: 120 NGFFHRDLKPENLLV-SQGIIKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQSELYS 178
HRD+KPENLL+ S G +KIADFG + S G+ Y PE +++ ++
Sbjct: 127 KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS-RRAALCGTLDYLPPE-MIEGRMHD 184
Query: 179 SKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQARAIKYQF 238
K D+W++G + E P F +++ + ++ +++ F
Sbjct: 185 EKVDLWSLGVLCYEFLVGKPPFEA-------------------NTYQETYKRISRVEFTF 225
Query: 239 PQLPRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFF 284
P ++ A L L +PS+RP E L+HP+
Sbjct: 226 PDF-----------VTEGARDLISRLLKHNPSQRPMLREVLEHPWI 260
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 94.7 bits (234), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 79/296 (26%), Positives = 133/296 (44%), Gaps = 40/296 (13%)
Query: 2 DKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLNL----REVKCLRKL 57
D Y + +G+G F V + + TG+ A+K + + L+ RE L
Sbjct: 26 DVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHML 85
Query: 58 NHSNIVKLKELIQNNNRLYLVFECMECN--LYQLMAARDRK-LFSEPEIKAWLFQVFQGL 114
H +IV+L E ++ LY+VFE M+ ++++ D ++SE ++ Q+ + L
Sbjct: 86 KHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEAL 145
Query: 115 SYMHQNGFFHRDLKPENLLVSQ----GIIKIADFGLAREI-KSGPPYTNYVGSRWYRAPE 169
Y H N HRD+KP +L++ +K+ FG+A ++ +SG VG+ + APE
Sbjct: 146 RYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRVGTPHFMAPE 205
Query: 170 ILLQSELYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLR 229
++ + E Y D+W G I+ L + C F G T + +G+
Sbjct: 206 VV-KREPYGKPVDVWGCGVILFILLSGCLPFYG-----------------TKERLFEGI- 246
Query: 230 QARAIKYQFPQLPRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFFK 285
IK ++ PR S+ A L + DP++R T EAL HP+ K
Sbjct: 247 ----IKGKYKMNPRQ-----WSHISESAKDLVRRMLMLDPAERITVYEALNHPWLK 293
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 74/289 (25%), Positives = 140/289 (48%), Gaps = 34/289 (11%)
Query: 2 DKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLNLREVKCLRKLNHSN 61
+KY ++LGRG FG V + + + + K +K + + L +E+ L H N
Sbjct: 5 EKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVK--GTDQVLVKKEISILNIARHRN 62
Query: 62 IVKLKELIQNNNRLYLVFECME-CNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQN 120
I+ L E ++ L ++FE + ++++ + +L +E EI +++ QV + L ++H +
Sbjct: 63 ILHLHESFESMEELVMIFEFISGLDIFERINTSAFEL-NEREIVSYVHQVCEALQFLHSH 121
Query: 121 GFFHRDLKPENLLVS---QGIIKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQSELY 177
H D++PEN++ IKI +FG AR++K G + + Y APE+ Q ++
Sbjct: 122 NIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNFRLLFTAPEYYAPEV-HQHDVV 180
Query: 178 SSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQARAIKYQ 237
S+ DMW++G ++ L + + P +E +Q I ++ + +Y
Sbjct: 181 STATDMWSLGTLVYVLLS--GINPFLAETNQQI-IENIMNA----------------EYT 221
Query: 238 FPQLPRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFFKR 286
F + +S +A+ + L + R TA+EALQHP+ K+
Sbjct: 222 FDEEAFKEISI-------EAMDFVDRLLVKERKSRMTASEALQHPWLKQ 263
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/205 (32%), Positives = 107/205 (52%), Gaps = 19/205 (9%)
Query: 1 MDKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDC-LNLREVKCLRK-LN 58
++ + + LG GA+G V A + T EAVA+K + + A DC N+++ C+ K LN
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV--DCPENIKKEICINKMLN 63
Query: 59 HSNIVKLKELIQNNNRLYLVFECMECNLYQLMAARDRKL-FSEPEIKAWLFQVFQGLSYM 117
H N+VK + N YL E C+ +L + + EP+ + + Q+ G+ Y+
Sbjct: 64 HENVVKFYGHRREGNIQYLFLEY--CSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYL 121
Query: 118 HQNGFFHRDLKPENLLVSQ-GIIKIADFGLAREIKSGPPYTN-------YVGSRWYRAPE 169
H G HRD+KPENLL+ + +KI+DFGLA + Y N G+ Y APE
Sbjct: 122 HGIGITHRDIKPENLLLDERDNLKISDFGLATVFR----YNNRERLLNKMCGTLPYVAPE 177
Query: 170 ILLQSELYSSKADMWAMGAIMAELF 194
+L + E ++ D+W+ G ++ +
Sbjct: 178 LLKRREFHAEPVDVWSCGIVLTAML 202
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/205 (32%), Positives = 107/205 (52%), Gaps = 19/205 (9%)
Query: 1 MDKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDC-LNLREVKCLRK-LN 58
++ + + LG GA+G V A + T EAVA+K + + A DC N+++ C+ K LN
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV--DCPENIKKEICINKMLN 63
Query: 59 HSNIVKLKELIQNNNRLYLVFECMECNLYQLMAARDRKL-FSEPEIKAWLFQVFQGLSYM 117
H N+VK + N YL E C+ +L + + EP+ + + Q+ G+ Y+
Sbjct: 64 HENVVKFYGHRREGNIQYLFLEY--CSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYL 121
Query: 118 HQNGFFHRDLKPENLLVSQ-GIIKIADFGLAREIKSGPPYTN-------YVGSRWYRAPE 169
H G HRD+KPENLL+ + +KI+DFGLA + Y N G+ Y APE
Sbjct: 122 HGIGITHRDIKPENLLLDERDNLKISDFGLATVFR----YNNRERLLNKMCGTLPYVAPE 177
Query: 170 ILLQSELYSSKADMWAMGAIMAELF 194
+L + E ++ D+W+ G ++ +
Sbjct: 178 LLKRREFHAEPVDVWSCGIVLTAML 202
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/205 (32%), Positives = 107/205 (52%), Gaps = 19/205 (9%)
Query: 1 MDKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDC-LNLREVKCLRK-LN 58
++ + + LG GA+G V A + T EAVA+K + + A DC N+++ C+ K LN
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV--DCPENIKKEICINKMLN 63
Query: 59 HSNIVKLKELIQNNNRLYLVFECMECNLYQLMAARDRKL-FSEPEIKAWLFQVFQGLSYM 117
H N+VK + N YL E C+ +L + + EP+ + + Q+ G+ Y+
Sbjct: 64 HENVVKFYGHRREGNIQYLFLEY--CSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYL 121
Query: 118 HQNGFFHRDLKPENLLVSQ-GIIKIADFGLAREIKSGPPYTN-------YVGSRWYRAPE 169
H G HRD+KPENLL+ + +KI+DFGLA + Y N G+ Y APE
Sbjct: 122 HGIGITHRDIKPENLLLDERDNLKISDFGLATVFR----YNNRERLLNKMCGTLPYVAPE 177
Query: 170 ILLQSELYSSKADMWAMGAIMAELF 194
+L + E ++ D+W+ G ++ +
Sbjct: 178 LLKRREFHAEPVDVWSCGIVLTAML 202
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 78/282 (27%), Positives = 131/282 (46%), Gaps = 34/282 (12%)
Query: 10 LGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLNLREVKCLRKLNHSNIVKLKELI 69
LG+G +G V+ D +AIKE+ +R + + L+ E+ + L H NIV+
Sbjct: 30 LGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLH-EEIALHKHLKHKNIVQYLGSF 88
Query: 70 QNNNRLYLVFECMEC-NLYQLMAARDRKL-FSEPEIKAWLFQVFQGLSYMHQNGFFHRDL 127
N + + E + +L L+ ++ L +E I + Q+ +GL Y+H N HRD+
Sbjct: 89 SENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVHRDI 148
Query: 128 KPENLLVS--QGIIKIADFGLAREIKSGPPYT-NYVGSRWYRAPEILLQS-ELYSSKADM 183
K +N+L++ G++KI+DFG ++ + P T + G+ Y APEI+ + Y AD+
Sbjct: 149 KGDNVLINTYSGVLKISDFGTSKRLAGINPCTETFTGTLQYMAPEIIDKGPRGYGKAADI 208
Query: 184 WAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQARAIKYQFPQLPR 243
W++G + E+ T P F Y+ LG P + G+ + P++P
Sbjct: 209 WSLGCTIIEMATGKPPF---------YE----LGEPQAAMFKVGMFKVH------PEIPE 249
Query: 244 ANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFFK 285
S S +A + DP KR A + L F K
Sbjct: 250 --------SMSAEAKAFILKCFEPDPDKRACANDLLVDEFLK 283
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 88/300 (29%), Positives = 133/300 (44%), Gaps = 48/300 (16%)
Query: 8 KELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLN--LREVKCLRKLNHSNIVKL 65
K LG G+F V A + T AIK L++R+ E+ + RE + +L+H VKL
Sbjct: 38 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 97
Query: 66 KELIQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQNGFFHR 125
Q++ +LY + N L R F E + + ++ L Y+H G HR
Sbjct: 98 YFTFQDDEKLYFGLSYAK-NGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHR 156
Query: 126 DLKPENLLVSQGI-IKIADFGLAREI--KSGPPYTN-YVGSRWYRAPEILLQSELYSSKA 181
DLKPEN+L+++ + I+I DFG A+ + +S N +VG+ Y +PE+L + S +
Sbjct: 157 DLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSAXKS-S 215
Query: 182 DMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQARAIK--YQFP 239
D+WA+G I+ +L V G P + +GL A+ IK Y FP
Sbjct: 216 DLWALGCIIYQL---------------------VAGLPPFRAGNEGLIFAKIIKLEYDFP 254
Query: 240 QLPRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEA------LQHPFFKRCFYAPPH 293
+ P A L E L D +KR E HPFF+ + H
Sbjct: 255 E-------KFFPKAR----DLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENLH 303
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 79/296 (26%), Positives = 133/296 (44%), Gaps = 40/296 (13%)
Query: 2 DKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLNL----REVKCLRKL 57
D Y + +G+G F V + + TG+ A+K + + L+ RE L
Sbjct: 24 DVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHML 83
Query: 58 NHSNIVKLKELIQNNNRLYLVFECMECN--LYQLMAARDRK-LFSEPEIKAWLFQVFQGL 114
H +IV+L E ++ LY+VFE M+ ++++ D ++SE ++ Q+ + L
Sbjct: 84 KHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEAL 143
Query: 115 SYMHQNGFFHRDLKPENLLVSQ----GIIKIADFGLAREI-KSGPPYTNYVGSRWYRAPE 169
Y H N HRD+KP +L++ +K+ FG+A ++ +SG VG+ + APE
Sbjct: 144 RYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRVGTPHFMAPE 203
Query: 170 ILLQSELYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLR 229
++ + E Y D+W G I+ L + C F G T + +G+
Sbjct: 204 VV-KREPYGKPVDVWGCGVILFILLSGCLPFYG-----------------TKERLFEGI- 244
Query: 230 QARAIKYQFPQLPRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFFK 285
IK ++ PR S+ A L + DP++R T EAL HP+ K
Sbjct: 245 ----IKGKYKMNPRQ-----WSHISESAKDLVRRMLMLDPAERITVYEALNHPWLK 291
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 120/237 (50%), Gaps = 19/237 (8%)
Query: 8 KELGRGAFGRVFQAFDEHTGEAVAIKELK----QRYASWEDCLNLREVKCLRKLNHSNIV 63
K++GRG F V++A G VA+K+++ + DC+ +E+ L++LNH N++
Sbjct: 38 KKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCI--KEIDLLKQLNHPNVI 95
Query: 64 KLKELIQNNNRLYLVFECMECNLYQLMAA---RDRKLFSEPEIKAWLFQVFQGLSYMHQN 120
K +N L +V E + M + ++L E + + Q+ L +MH
Sbjct: 96 KYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSR 155
Query: 121 GFFHRDLKPENLLVS-QGIIKIADFGLAREIKSGPPYTN-YVGSRWYRAPEILLQSELYS 178
HRD+KP N+ ++ G++K+ D GL R S + VG+ +Y +PE + ++ Y+
Sbjct: 156 RVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIHENG-YN 214
Query: 179 SKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGS---PTM--DSWADGLRQ 230
K+D+W++G ++ E+ F G + +Y +C + P + D +++ LRQ
Sbjct: 215 FKSDIWSLGCLLYEMAALQSPFYG--DKMNLYSLCKKIEQCDYPPLPSDHYSEELRQ 269
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 124/227 (54%), Gaps = 11/227 (4%)
Query: 8 KELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLNLREVKCLRKLNHSNIVKLKE 67
K+LG G FG V+ + ++ + VA+K LK S + L E ++ L H +V+L
Sbjct: 18 KKLGAGQFGEVWMGYYNNSTK-VAVKTLKPGTMSVQAFL--EEANLMKTLQHDKLVRLYA 74
Query: 68 LIQNNNRLYLVFECM-ECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQNGFFHRD 126
++ +Y++ E M + +L + + + P++ + Q+ +G++Y+ + + HRD
Sbjct: 75 VVTKEEPIYIITEFMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKNYIHRD 134
Query: 127 LKPENLLVSQGII-KIADFGLAREIKSGPPYTNYVGSRW---YRAPEILLQSELYSSKAD 182
L+ N+LVS+ ++ KIADFGLAR I+ YT G+++ + APE + ++ K++
Sbjct: 135 LRAANVLVSESLMCKIADFGLARVIEDN-EYTAREGAKFPIKWTAPEA-INFGCFTIKSN 192
Query: 183 MWAMGAIMAELFTFCPL-FPGASEADQMYKICGVLGSPTMDSWADGL 228
+W+ G ++ E+ T+ + +PG + AD M + P M++ D L
Sbjct: 193 VWSFGILLYEIVTYGKIPYPGRTNADVMSALSQGYRMPRMENCPDEL 239
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 69/221 (31%), Positives = 113/221 (51%), Gaps = 19/221 (8%)
Query: 1 MDKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDC-LNLREVKCLRK-LN 58
++ + + LG GA+G V A + T EAVA+K + + A DC N+++ C+ K LN
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV--DCPENIKKEICINKMLN 62
Query: 59 HSNIVKLKELIQNNNRLYLVFECMECNLYQLMAARDRKL-FSEPEIKAWLFQVFQGLSYM 117
H N+VK + N YL E C+ +L + + EP+ + + Q+ G+ Y+
Sbjct: 63 HENVVKFYGHRREGNIQYLFLEY--CSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYL 120
Query: 118 HQNGFFHRDLKPENLLVSQ-GIIKIADFGLAREIKSGPPYTN-------YVGSRWYRAPE 169
H G HRD+KPENLL+ + +KI+DFGLA + Y N G+ Y APE
Sbjct: 121 HGIGITHRDIKPENLLLDERDNLKISDFGLATVFR----YNNRERLLNKMXGTLPYVAPE 176
Query: 170 ILLQSELYSSKADMWAMGAIMAELFTFCPLFPGASEADQMY 210
+L + E ++ D+W+ G ++ + + S++ Q Y
Sbjct: 177 LLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSXQEY 217
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/205 (32%), Positives = 107/205 (52%), Gaps = 19/205 (9%)
Query: 1 MDKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDC-LNLREVKCLRK-LN 58
++ + + LG GA+G V A + T EAVA+K + + A DC N+++ C+ K LN
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV--DCPENIKKEICINKMLN 63
Query: 59 HSNIVKLKELIQNNNRLYLVFECMECNLYQLMAARDRKL-FSEPEIKAWLFQVFQGLSYM 117
H N+VK + N YL E C+ +L + + EP+ + + Q+ G+ Y+
Sbjct: 64 HENVVKFYGHRREGNIQYLFLEY--CSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYL 121
Query: 118 HQNGFFHRDLKPENLLVSQ-GIIKIADFGLAREIKSGPPYTN-------YVGSRWYRAPE 169
H G HRD+KPENLL+ + +KI+DFGLA + Y N G+ Y APE
Sbjct: 122 HGIGITHRDIKPENLLLDERDNLKISDFGLATVFR----YNNRERLLNKMCGTLPYVAPE 177
Query: 170 ILLQSELYSSKADMWAMGAIMAELF 194
+L + E ++ D+W+ G ++ +
Sbjct: 178 LLKRREFHAEPVDVWSCGIVLTAML 202
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 78/282 (27%), Positives = 131/282 (46%), Gaps = 34/282 (12%)
Query: 10 LGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLNLREVKCLRKLNHSNIVKLKELI 69
LG+G +G V+ D +AIKE+ +R + + L+ E+ + L H NIV+
Sbjct: 16 LGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLH-EEIALHKHLKHKNIVQYLGSF 74
Query: 70 QNNNRLYLVFECMEC-NLYQLMAARDRKL-FSEPEIKAWLFQVFQGLSYMHQNGFFHRDL 127
N + + E + +L L+ ++ L +E I + Q+ +GL Y+H N HRD+
Sbjct: 75 SENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVHRDI 134
Query: 128 KPENLLVS--QGIIKIADFGLAREIKSGPPYT-NYVGSRWYRAPEILLQS-ELYSSKADM 183
K +N+L++ G++KI+DFG ++ + P T + G+ Y APEI+ + Y AD+
Sbjct: 135 KGDNVLINTYSGVLKISDFGTSKRLAGINPCTETFTGTLQYMAPEIIDKGPRGYGKAADI 194
Query: 184 WAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQARAIKYQFPQLPR 243
W++G + E+ T P F Y+ LG P + G+ + P++P
Sbjct: 195 WSLGCTIIEMATGKPPF---------YE----LGEPQAAMFKVGMFKVH------PEIPE 235
Query: 244 ANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFFK 285
S S +A + DP KR A + L F K
Sbjct: 236 --------SMSAEAKAFILKCFEPDPDKRACANDLLVDEFLK 269
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/205 (32%), Positives = 107/205 (52%), Gaps = 19/205 (9%)
Query: 1 MDKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDC-LNLREVKCLRK-LN 58
++ + + LG GA+G V A + T EAVA+K + + A DC N+++ C+ K LN
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV--DCPENIKKEICINKMLN 62
Query: 59 HSNIVKLKELIQNNNRLYLVFECMECNLYQLMAARDRKL-FSEPEIKAWLFQVFQGLSYM 117
H N+VK + N YL E C+ +L + + EP+ + + Q+ G+ Y+
Sbjct: 63 HENVVKFYGHRREGNIQYLFLEY--CSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYL 120
Query: 118 HQNGFFHRDLKPENLLVSQ-GIIKIADFGLAREIKSGPPYTN-------YVGSRWYRAPE 169
H G HRD+KPENLL+ + +KI+DFGLA + Y N G+ Y APE
Sbjct: 121 HGIGITHRDIKPENLLLDERDNLKISDFGLATVFR----YNNRERLLNKMXGTLPYVAPE 176
Query: 170 ILLQSELYSSKADMWAMGAIMAELF 194
+L + E ++ D+W+ G ++ +
Sbjct: 177 LLKRREFHAEPVDVWSCGIVLTAML 201
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/205 (32%), Positives = 107/205 (52%), Gaps = 19/205 (9%)
Query: 1 MDKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDC-LNLREVKCLRK-LN 58
++ + + LG GA+G V A + T EAVA+K + + A DC N+++ C+ K LN
Sbjct: 4 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV--DCPENIKKEICINKMLN 61
Query: 59 HSNIVKLKELIQNNNRLYLVFECMECNLYQLMAARDRKL-FSEPEIKAWLFQVFQGLSYM 117
H N+VK + N YL E C+ +L + + EP+ + + Q+ G+ Y+
Sbjct: 62 HENVVKFYGHRREGNIQYLFLEY--CSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYL 119
Query: 118 HQNGFFHRDLKPENLLVSQ-GIIKIADFGLAREIKSGPPYTN-------YVGSRWYRAPE 169
H G HRD+KPENLL+ + +KI+DFGLA + Y N G+ Y APE
Sbjct: 120 HGIGITHRDIKPENLLLDERDNLKISDFGLATVFR----YNNRERLLNKMCGTLPYVAPE 175
Query: 170 ILLQSELYSSKADMWAMGAIMAELF 194
+L + E ++ D+W+ G ++ +
Sbjct: 176 LLKRREFHAEPVDVWSCGIVLTAML 200
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/205 (32%), Positives = 107/205 (52%), Gaps = 19/205 (9%)
Query: 1 MDKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDC-LNLREVKCLRK-LN 58
++ + + LG GA+G V A + T EAVA+K + + A DC N+++ C+ K LN
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV--DCPENIKKEICINKMLN 62
Query: 59 HSNIVKLKELIQNNNRLYLVFECMECNLYQLMAARDRKL-FSEPEIKAWLFQVFQGLSYM 117
H N+VK + N YL E C+ +L + + EP+ + + Q+ G+ Y+
Sbjct: 63 HENVVKFYGHRREGNIQYLFLEY--CSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYL 120
Query: 118 HQNGFFHRDLKPENLLVSQ-GIIKIADFGLAREIKSGPPYTN-------YVGSRWYRAPE 169
H G HRD+KPENLL+ + +KI+DFGLA + Y N G+ Y APE
Sbjct: 121 HGIGITHRDIKPENLLLDERDNLKISDFGLATVFR----YNNRERLLNKMCGTLPYVAPE 176
Query: 170 ILLQSELYSSKADMWAMGAIMAELF 194
+L + E ++ D+W+ G ++ +
Sbjct: 177 LLKRREFHAEPVDVWSCGIVLTAML 201
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/205 (32%), Positives = 107/205 (52%), Gaps = 19/205 (9%)
Query: 1 MDKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDC-LNLREVKCLRK-LN 58
++ + + LG GA+G V A + T EAVA+K + + A DC N+++ C+ K LN
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV--DCPENIKKEICINKMLN 62
Query: 59 HSNIVKLKELIQNNNRLYLVFECMECNLYQLMAARDRKL-FSEPEIKAWLFQVFQGLSYM 117
H N+VK + N YL E C+ +L + + EP+ + + Q+ G+ Y+
Sbjct: 63 HENVVKFYGHRREGNIQYLFLEY--CSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYL 120
Query: 118 HQNGFFHRDLKPENLLVSQ-GIIKIADFGLAREIKSGPPYTN-------YVGSRWYRAPE 169
H G HRD+KPENLL+ + +KI+DFGLA + Y N G+ Y APE
Sbjct: 121 HGIGITHRDIKPENLLLDERDNLKISDFGLATVFR----YNNRERLLNKMCGTLPYVAPE 176
Query: 170 ILLQSELYSSKADMWAMGAIMAELF 194
+L + E ++ D+W+ G ++ +
Sbjct: 177 LLKRREFHAEPVDVWSCGIVLTAML 201
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/205 (32%), Positives = 107/205 (52%), Gaps = 19/205 (9%)
Query: 1 MDKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDC-LNLREVKCLRK-LN 58
++ + + LG GA+G V A + T EAVA+K + + A DC N+++ C+ K LN
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV--DCPENIKKEICINKMLN 63
Query: 59 HSNIVKLKELIQNNNRLYLVFECMECNLYQLMAARDRKL-FSEPEIKAWLFQVFQGLSYM 117
H N+VK + N YL E C+ +L + + EP+ + + Q+ G+ Y+
Sbjct: 64 HENVVKFYGHRREGNIQYLFLEY--CSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYL 121
Query: 118 HQNGFFHRDLKPENLLVSQ-GIIKIADFGLAREIKSGPPYTN-------YVGSRWYRAPE 169
H G HRD+KPENLL+ + +KI+DFGLA + Y N G+ Y APE
Sbjct: 122 HGIGITHRDIKPENLLLDERDNLKISDFGLATVFR----YNNRERLLNKMCGTLPYVAPE 177
Query: 170 ILLQSELYSSKADMWAMGAIMAELF 194
+L + E ++ D+W+ G ++ +
Sbjct: 178 LLKRREFHAEPVDVWSCGIVLTAML 202
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 107/212 (50%), Gaps = 18/212 (8%)
Query: 3 KYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDC---------LNLREVKC 53
KYS LG GAFG V+ A D+ + V +K +K+ EDC + L E+
Sbjct: 25 KYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKV-LEDCWIEDPKLGKVTL-EIAI 82
Query: 54 LRKLNHSNIVKLKELIQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLF-QVFQ 112
L ++ H+NI+K+ ++ +N LV E L L A DR + + +++F Q+
Sbjct: 83 LSRVEHANIIKVLDIFENQGFFQLVMEKHGSGL-DLFAFIDRHPRLDEPLASYIFRQLVS 141
Query: 113 GLSYMHQNGFFHRDLKPENLLVSQGI-IKIADFGLAREIKSGPPYTNYVGSRWYRAPEIL 171
+ Y+ HRD+K EN+++++ IK+ DFG A ++ G + + G+ Y APE+L
Sbjct: 142 AVGYLRLKDIIHRDIKDENIVIAEDFTIKLIDFGSAAYLERGKLFYTFCGTIEYCAPEVL 201
Query: 172 LQSELYSSKADMWAMGAIMAELF----TFCPL 199
+ + + +MW++G + L FC L
Sbjct: 202 MGNPYRGPELEMWSLGVTLYTLVFEENPFCEL 233
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/205 (32%), Positives = 107/205 (52%), Gaps = 19/205 (9%)
Query: 1 MDKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDC-LNLREVKCLRK-LN 58
++ + + LG GA+G V A + T EAVA+K + + A DC N+++ C+ K LN
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV--DCPENIKKEICINKMLN 62
Query: 59 HSNIVKLKELIQNNNRLYLVFECMECNLYQLMAARDRKL-FSEPEIKAWLFQVFQGLSYM 117
H N+VK + N YL E C+ +L + + EP+ + + Q+ G+ Y+
Sbjct: 63 HENVVKFYGHRREGNIQYLFLEY--CSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYL 120
Query: 118 HQNGFFHRDLKPENLLVSQ-GIIKIADFGLAREIKSGPPYTN-------YVGSRWYRAPE 169
H G HRD+KPENLL+ + +KI+DFGLA + Y N G+ Y APE
Sbjct: 121 HGIGITHRDIKPENLLLDERDNLKISDFGLATVFR----YNNRERLLNKMCGTLPYVAPE 176
Query: 170 ILLQSELYSSKADMWAMGAIMAELF 194
+L + E ++ D+W+ G ++ +
Sbjct: 177 LLKRREFHAEPVDVWSCGIVLTAML 201
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 123/227 (54%), Gaps = 11/227 (4%)
Query: 8 KELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLNLREVKCLRKLNHSNIVKLKE 67
K LG G FG V+ + ++ + VA+K LK S + L E ++ L H +V+L
Sbjct: 19 KRLGAGQFGEVWMGYYNNSTK-VAVKTLKPGTMSVQAFLE--EANLMKTLQHDKLVRLYA 75
Query: 68 LIQNNNRLYLVFECM-ECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQNGFFHRD 126
++ +Y++ E M + +L + + + P++ + Q+ +G++Y+ + + HRD
Sbjct: 76 VVTREEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKNYIHRD 135
Query: 127 LKPENLLVSQGII-KIADFGLAREIKSGPPYTNYVGSRW---YRAPEILLQSELYSSKAD 182
L+ N+LVS+ ++ KIADFGLAR I+ YT G+++ + APE + ++ K+D
Sbjct: 136 LRAANVLVSESLMCKIADFGLARVIEDN-EYTAREGAKFPIKWTAPEA-INFGCFTIKSD 193
Query: 183 MWAMGAIMAELFTFCPL-FPGASEADQMYKICGVLGSPTMDSWADGL 228
+W+ G ++ E+ T+ + +PG + AD M + P +++ D L
Sbjct: 194 VWSFGILLYEIVTYGKIPYPGRTNADVMTALSQGYRMPRVENCPDEL 240
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/205 (32%), Positives = 107/205 (52%), Gaps = 19/205 (9%)
Query: 1 MDKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDC-LNLREVKCLRK-LN 58
++ + + LG GA+G V A + T EAVA+K + + A DC N+++ C+ K LN
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV--DCPENIKKEICINKMLN 62
Query: 59 HSNIVKLKELIQNNNRLYLVFECMECNLYQLMAARDRKL-FSEPEIKAWLFQVFQGLSYM 117
H N+VK + N YL E C+ +L + + EP+ + + Q+ G+ Y+
Sbjct: 63 HENVVKFYGHRREGNIQYLFLEY--CSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYL 120
Query: 118 HQNGFFHRDLKPENLLVSQ-GIIKIADFGLAREIKSGPPYTN-------YVGSRWYRAPE 169
H G HRD+KPENLL+ + +KI+DFGLA + Y N G+ Y APE
Sbjct: 121 HGIGITHRDIKPENLLLDERDNLKISDFGLATVFR----YNNRERLLNKMCGTLPYVAPE 176
Query: 170 ILLQSELYSSKADMWAMGAIMAELF 194
+L + E ++ D+W+ G ++ +
Sbjct: 177 LLKRREFHAEPVDVWSCGIVLTAML 201
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/205 (32%), Positives = 107/205 (52%), Gaps = 19/205 (9%)
Query: 1 MDKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDC-LNLREVKCLRK-LN 58
++ + + LG GA+G V A + T EAVA+K + + A DC N+++ C+ K LN
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV--DCPENIKKEICINKMLN 62
Query: 59 HSNIVKLKELIQNNNRLYLVFECMECNLYQLMAARDRKL-FSEPEIKAWLFQVFQGLSYM 117
H N+VK + N YL E C+ +L + + EP+ + + Q+ G+ Y+
Sbjct: 63 HENVVKFYGHRREGNIQYLFLEY--CSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYL 120
Query: 118 HQNGFFHRDLKPENLLVSQ-GIIKIADFGLAREIKSGPPYTN-------YVGSRWYRAPE 169
H G HRD+KPENLL+ + +KI+DFGLA + Y N G+ Y APE
Sbjct: 121 HGIGITHRDIKPENLLLDERDNLKISDFGLATVFR----YNNRERLLNKMCGTLPYVAPE 176
Query: 170 ILLQSELYSSKADMWAMGAIMAELF 194
+L + E ++ D+W+ G ++ +
Sbjct: 177 LLKRREFHAEPVDVWSCGIVLTAML 201
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/205 (32%), Positives = 107/205 (52%), Gaps = 19/205 (9%)
Query: 1 MDKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDC-LNLREVKCLRK-LN 58
++ + + LG GA+G V A + T EAVA+K + + A DC N+++ C+ K LN
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV--DCPENIKKEICINKMLN 62
Query: 59 HSNIVKLKELIQNNNRLYLVFECMECNLYQLMAARDRKL-FSEPEIKAWLFQVFQGLSYM 117
H N+VK + N YL E C+ +L + + EP+ + + Q+ G+ Y+
Sbjct: 63 HENVVKFYGHRREGNIQYLFLEY--CSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYL 120
Query: 118 HQNGFFHRDLKPENLLVSQ-GIIKIADFGLAREIKSGPPYTN-------YVGSRWYRAPE 169
H G HRD+KPENLL+ + +KI+DFGLA + Y N G+ Y APE
Sbjct: 121 HGIGITHRDIKPENLLLDERDNLKISDFGLATVFR----YNNRERLLNKMXGTLPYVAPE 176
Query: 170 ILLQSELYSSKADMWAMGAIMAELF 194
+L + E ++ D+W+ G ++ +
Sbjct: 177 LLKRREFHAEPVDVWSCGIVLTAML 201
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 79/286 (27%), Positives = 136/286 (47%), Gaps = 37/286 (12%)
Query: 4 YSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLNLREVKCLRKLNHSNIV 63
+ ++LG G++G V++A + TG+ VAIK++ E ++E+ +++ + ++V
Sbjct: 31 FDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVESDLQE---IIKEISIMQQCDSPHVV 87
Query: 64 KLKELIQNNNRLYLVFE-CMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQNGF 122
K N L++V E C ++ ++ R++ L +E EI L +GL Y+H
Sbjct: 88 KYYGSYFKNTDLWIVMEYCGAGSVSDIIRLRNKTL-TEDEIATILQSTLKGLEYLHFMRK 146
Query: 123 FHRDLKPENLLV-SQGIIKIADFGLAREIKSGPPYTNYV-GSRWYRAPEILLQSELYSSK 180
HRD+K N+L+ ++G K+ADFG+A ++ N V G+ ++ APE+ +Q Y+
Sbjct: 147 IHRDIKAGNILLNTEGHAKLADFGVAGQLTDXMAKRNXVIGTPFWMAPEV-IQEIGYNCV 205
Query: 181 ADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQARAIKYQFPQ 240
AD+W++G E+ G P +AD + RAI + P
Sbjct: 206 ADIWSLGITAIEMAE---------------------GKP---PYAD-IHPMRAI-FMIPT 239
Query: 241 LPRANLSALMPSASQDAISLFESLC-SWDPSKRPTAAEALQHPFFK 285
P P D + F C P +R TA + LQHPF +
Sbjct: 240 NPPPTFRK--PELWSDNFTDFVKQCLVKSPEQRATATQLLQHPFVR 283
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 74/286 (25%), Positives = 133/286 (46%), Gaps = 35/286 (12%)
Query: 3 KYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLNLREVKCLRKLNHSNI 62
KY+ F+++G+GA G V+ A D TG+ VAI+++ + ++ + + E+ +R+ + NI
Sbjct: 22 KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELI-INEILVMRENKNPNI 80
Query: 63 VKLKELIQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQNGF 122
V + + L++V E + L E +I A + Q L ++H N
Sbjct: 81 VNYLDSYLVGDELWVVMEYLAGG--SLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQV 138
Query: 123 FHRDLKPENLLVS-QGIIKIADFGLAREIK-SGPPYTNYVGSRWYRAPEILLQSELYSSK 180
HR++K +N+L+ G +K+ DFG +I + VG+ ++ APE++ + + Y K
Sbjct: 139 IHRNIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTR-KAYGPK 197
Query: 181 ADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQARAIKYQFPQ 240
D+W++G + E+ P + + +Y I G+P + Q P+
Sbjct: 198 VDIWSLGIMAIEMIEGEPPYLNENPLRALYLI-ATNGTPEL---------------QNPE 241
Query: 241 LPRANLSALMPSASQDAISLFESLC-SWDPSKRPTAAEALQHPFFK 285
LSA+ F + C D KR +A E +QH F K
Sbjct: 242 ----KLSAIFRD--------FLNRCLEMDVEKRGSAKELIQHQFLK 275
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 77/282 (27%), Positives = 126/282 (44%), Gaps = 38/282 (13%)
Query: 10 LGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLNL--REVKCLRKLNHSNIVKLKE 67
LG G FG+V + TG VA+K L ++ D + RE++ L+ H +I+KL +
Sbjct: 19 LGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQ 78
Query: 68 LIQNNNRLYLVFECMECN-LYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQNGFFHRD 126
+I ++V E + L+ + R E E + Q+ + Y H++ HRD
Sbjct: 79 VISTPTDFFMVMEYVSGGELFDYICKHGR--VEEMEARRLFQQILSAVDYCHRHMVVHRD 136
Query: 127 LKPENLLVSQGI-IKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQSELYSS-KADMW 184
LKPEN+L+ + KIADFGL+ + G + GS Y APE+ + LY+ + D+W
Sbjct: 137 LKPENVLLDAHMNAKIADFGLSNMMSDGEFLRDSCGSPNYAAPEV-ISGRLYAGPEVDIW 195
Query: 185 AMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQARAIKYQFPQLPRA 244
+ G I+ L C P E PT+ ++ R + P+
Sbjct: 196 SCGVILYAL--LCGTLPFDDEH-----------VPTL------FKKIRGGVFYIPEYLNR 236
Query: 245 NLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFFKR 286
+++ L+ Q DP KR T + +H +FK+
Sbjct: 237 SVATLLMHMLQ-----------VDPLKRATIKDIREHEWFKQ 267
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 88/300 (29%), Positives = 133/300 (44%), Gaps = 48/300 (16%)
Query: 8 KELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLN--LREVKCLRKLNHSNIVKL 65
K LG G+F V A + T AIK L++R+ E+ + RE + +L+H VKL
Sbjct: 38 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 97
Query: 66 KELIQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQNGFFHR 125
Q++ +LY + N L R F E + + ++ L Y+H G HR
Sbjct: 98 YFTFQDDEKLYFGLSYAK-NGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHR 156
Query: 126 DLKPENLLVSQGI-IKIADFGLAREI--KSGPPYTN-YVGSRWYRAPEILLQSELYSSKA 181
DLKPEN+L+++ + I+I DFG A+ + +S N +VG+ Y +PE+L + S +
Sbjct: 157 DLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKS-S 215
Query: 182 DMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQARAIK--YQFP 239
D+WA+G I+ +L V G P + +GL A+ IK Y FP
Sbjct: 216 DLWALGCIIYQL---------------------VAGLPPFRAGNEGLIFAKIIKLEYDFP 254
Query: 240 QLPRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEA------LQHPFFKRCFYAPPH 293
+ P A L E L D +KR E HPFF+ + H
Sbjct: 255 E-------KFFPKAR----DLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENLH 303
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 85/290 (29%), Positives = 129/290 (44%), Gaps = 44/290 (15%)
Query: 8 KELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLN--LREVKCLRKLNHSNIVKL 65
K LG G+F V A + T AIK L++R+ E+ + RE + +L+H VKL
Sbjct: 41 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 100
Query: 66 KELIQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQNGFFHR 125
Q++ +LY + N L R F E + + ++ L Y+H G HR
Sbjct: 101 YFTFQDDEKLYFGLSYAK-NGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHR 159
Query: 126 DLKPENLLVSQGI-IKIADFGLAREI--KSGPPYTN-YVGSRWYRAPEILLQSELYSSKA 181
DLKPEN+L+++ + I+I DFG A+ + +S N +VG+ Y +PE+L + S +
Sbjct: 160 DLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKS-S 218
Query: 182 DMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQARAIKYQFPQL 241
D+WA+G I+ +L P F +E KI ++Y FP
Sbjct: 219 DLWALGCIIYQLVAGLPPFRAGNEYLIFQKII-------------------KLEYDFP-- 257
Query: 242 PRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEA------LQHPFFK 285
+A P A L E L D +KR E HPFF+
Sbjct: 258 -----AAFFPKAR----DLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFE 298
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 77/282 (27%), Positives = 125/282 (44%), Gaps = 38/282 (13%)
Query: 10 LGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLNL--REVKCLRKLNHSNIVKLKE 67
LG G FG+V + TG VA+K L ++ D + RE++ L+ H +I+KL +
Sbjct: 19 LGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQ 78
Query: 68 LIQNNNRLYLVFECMECN-LYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQNGFFHRD 126
+I ++V E + L+ + R E E + Q+ + Y H++ HRD
Sbjct: 79 VISTPTDFFMVMEYVSGGELFDYICKHGR--VEEMEARRLFQQILSAVDYCHRHMVVHRD 136
Query: 127 LKPENLLVSQGI-IKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQSELYSS-KADMW 184
LKPEN+L+ + KIADFGL+ + G GS Y APE+ + LY+ + D+W
Sbjct: 137 LKPENVLLDAHMNAKIADFGLSNMMSDGEFLRTSCGSPNYAAPEV-ISGRLYAGPEVDIW 195
Query: 185 AMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQARAIKYQFPQLPRA 244
+ G I+ L C P E PT+ ++ R + P+
Sbjct: 196 SCGVILYAL--LCGTLPFDDEH-----------VPTL------FKKIRGGVFYIPEYLNR 236
Query: 245 NLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFFKR 286
+++ L+ Q DP KR T + +H +FK+
Sbjct: 237 SVATLLMHMLQ-----------VDPLKRATIKDIREHEWFKQ 267
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 78/281 (27%), Positives = 130/281 (46%), Gaps = 41/281 (14%)
Query: 10 LGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLNLR---EVKCLRKLNHSNIVKLK 66
LG G+FG+V A T + VA+K + ++ D +++R E+ L+ L H +I+KL
Sbjct: 17 LGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSD-MHMRVEREISYLKLLRHPHIIKLY 75
Query: 67 ELIQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQNGFFHRD 126
++I + +V E L+ + + R +E E + + Q+ + Y H++ HRD
Sbjct: 76 DVITTPTDIVMVIEYAGGELFDYIVEKKR--MTEDEGRRFFQQIICAIEYCHRHKIVHRD 133
Query: 127 LKPENLLVSQGI-IKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQSELYSS-KADMW 184
LKPENLL+ + +KIADFGL+ + G GS Y APE+ + +LY+ + D+W
Sbjct: 134 LKPENLLLDDNLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEV-INGKLYAGPEVDVW 192
Query: 185 AMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGL-RQARAIKYQFPQLPR 243
+ G ++ + + G L P D + L ++ + Y P
Sbjct: 193 SCGIVLYVM------------------LVGRL--PFDDEFIPNLFKKVNSCVYVMPDF-- 230
Query: 244 ANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFF 284
L P A SL + DP +R T E + P+F
Sbjct: 231 -----LSPGAQ----SLIRRMIVADPMQRITIQEIRRDPWF 262
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 67/195 (34%), Positives = 99/195 (50%), Gaps = 12/195 (6%)
Query: 2 DKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLNLREVKCLRKLNHSN 61
D+Y K++G G FG D+ + E VA+K +++ E+ RE+ R L H N
Sbjct: 18 DRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVK--REIINHRSLRHPN 75
Query: 62 IVKLKELIQNNNRLYLVFECMECN-LYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQN 120
IV+ KE+I L +V E L++ + R FSE E + + Q+ G+SY H
Sbjct: 76 IVRFKEVILTPTHLAIVMEYASGGELFERICNAGR--FSEDEARFFFQQLISGVSYCHAM 133
Query: 121 GFFHRDLKPENLLVSQGI---IKIADFGLARE--IKSGPPYTNYVGSRWYRAPEILLQSE 175
HRDLK EN L+ +KI DFG ++ + S P T VG+ Y APE+LL+ E
Sbjct: 134 QVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKST--VGTPAYIAPEVLLKKE 191
Query: 176 LYSSKADMWAMGAIM 190
AD+W+ G +
Sbjct: 192 YDGKVADVWSCGVTL 206
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 84/290 (28%), Positives = 128/290 (44%), Gaps = 44/290 (15%)
Query: 8 KELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLN--LREVKCLRKLNHSNIVKL 65
K LG G+F V A + T AIK L++R+ E+ + RE + +L+H VKL
Sbjct: 38 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 97
Query: 66 KELIQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQNGFFHR 125
Q++ +LY + N L R F E + + ++ L Y+H G HR
Sbjct: 98 YFTFQDDEKLYFGLSYAK-NGCLLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHR 156
Query: 126 DLKPENLLVSQGI-IKIADFGLAREI--KSGPPYTN-YVGSRWYRAPEILLQSELYSSKA 181
DLKPEN+L+++ + I+I DFG A+ + +S N +VG+ Y +PE+L + S +
Sbjct: 157 DLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSA-SKSS 215
Query: 182 DMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQARAIKYQFPQL 241
D+WA+G I+ +L P F +E KI ++Y FP+
Sbjct: 216 DLWALGCIIYQLVAGLPPFRAGNEYLIFQKII-------------------KLEYDFPE- 255
Query: 242 PRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEA------LQHPFFK 285
P A L E L D +KR E HPFF+
Sbjct: 256 ------KFFPKAR----DLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFE 295
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 66/205 (32%), Positives = 106/205 (51%), Gaps = 19/205 (9%)
Query: 1 MDKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDC-LNLREVKCLRK-LN 58
++ + + LG GA G V A + T EAVA+K + + A DC N+++ C+ K LN
Sbjct: 5 VEDWDLVQTLGEGAAGEVQLAVNRVTEEAVAVKIVDMKRAV--DCPENIKKEICINKMLN 62
Query: 59 HSNIVKLKELIQNNNRLYLVFECMECNLYQLMAARDRKL-FSEPEIKAWLFQVFQGLSYM 117
H N+VK + N YL E C+ +L + + EP+ + + Q+ G+ Y+
Sbjct: 63 HENVVKFYGHRREGNIQYLFLEY--CSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYL 120
Query: 118 HQNGFFHRDLKPENLLVSQ-GIIKIADFGLAREIKSGPPYTN-------YVGSRWYRAPE 169
H G HRD+KPENLL+ + +KI+DFGLA + Y N G+ Y APE
Sbjct: 121 HGIGITHRDIKPENLLLDERDNLKISDFGLATVFR----YNNRERLLNKMCGTLPYVAPE 176
Query: 170 ILLQSELYSSKADMWAMGAIMAELF 194
+L + E ++ D+W+ G ++ +
Sbjct: 177 LLKRREFHAEPVDVWSCGIVLTAML 201
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 92.0 bits (227), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 65/205 (31%), Positives = 106/205 (51%), Gaps = 19/205 (9%)
Query: 1 MDKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDC-LNLREVKCLRK-LN 58
++ + + LG GA+G V A + T EAVA+K + + A DC N+++ C+ LN
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV--DCPENIKKEICINAMLN 63
Query: 59 HSNIVKLKELIQNNNRLYLVFECMECNLYQLMAARDRKL-FSEPEIKAWLFQVFQGLSYM 117
H N+VK + N YL E C+ +L + + EP+ + + Q+ G+ Y+
Sbjct: 64 HENVVKFYGHRREGNIQYLFLEY--CSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYL 121
Query: 118 HQNGFFHRDLKPENLLVSQ-GIIKIADFGLAREIKSGPPYTN-------YVGSRWYRAPE 169
H G HRD+KPENLL+ + +KI+DFGLA + Y N G+ Y APE
Sbjct: 122 HGIGITHRDIKPENLLLDERDNLKISDFGLATVFR----YNNRERLLNKMCGTLPYVAPE 177
Query: 170 ILLQSELYSSKADMWAMGAIMAELF 194
+L + E ++ D+W+ G ++ +
Sbjct: 178 LLKRREFHAEPVDVWSCGIVLTAML 202
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 91.7 bits (226), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 67/195 (34%), Positives = 99/195 (50%), Gaps = 12/195 (6%)
Query: 2 DKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLNLREVKCLRKLNHSN 61
D+Y K++G G FG D+ E VA+K +++ E+ RE+ R L H N
Sbjct: 19 DRYELVKDIGAGNFGVARLMRDKQANELVAVKYIERGEKIDENVK--REIINHRSLRHPN 76
Query: 62 IVKLKELIQNNNRLYLVFECMEC-NLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQN 120
IV+ KE+I L +V E L++ + R FSE E + + Q+ G+SY H
Sbjct: 77 IVRFKEVILTPTHLAIVMEYASGGELFERICNAGR--FSEDEARFFFQQLISGVSYAHAM 134
Query: 121 GFFHRDLKPENLLVSQGI---IKIADFGLARE--IKSGPPYTNYVGSRWYRAPEILLQSE 175
HRDLK EN L+ +KIADFG ++ + S P + VG+ Y APE+LL+ E
Sbjct: 135 QVAHRDLKLENTLLDGSPAPRLKIADFGYSKASVLHSQP--KSAVGTPAYIAPEVLLKKE 192
Query: 176 LYSSKADMWAMGAIM 190
AD+W+ G +
Sbjct: 193 YDGKVADVWSCGVTL 207
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 91.7 bits (226), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 84/290 (28%), Positives = 128/290 (44%), Gaps = 44/290 (15%)
Query: 8 KELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLN--LREVKCLRKLNHSNIVKL 65
K LG G+F V A + T AIK L++R+ E+ + RE + +L+H VKL
Sbjct: 38 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 97
Query: 66 KELIQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQNGFFHR 125
Q++ +LY + N L R F E + + ++ L Y+H G HR
Sbjct: 98 YFTFQDDEKLYFGLSYAK-NGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHR 156
Query: 126 DLKPENLLVSQGI-IKIADFGLAREI--KSGPPYTN-YVGSRWYRAPEILLQSELYSSKA 181
DLKPEN+L+++ + I+I DFG A+ + +S N +VG+ Y +PE+L + S +
Sbjct: 157 DLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKS-S 215
Query: 182 DMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQARAIKYQFPQL 241
D+WA+G I+ +L P F +E KI ++Y FP+
Sbjct: 216 DLWALGCIIYQLVAGLPPFRAGNEYLIFQKII-------------------KLEYDFPE- 255
Query: 242 PRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEA------LQHPFFK 285
P A L E L D +KR E HPFF+
Sbjct: 256 ------KFFPKAR----DLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFE 295
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 91.7 bits (226), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 84/290 (28%), Positives = 128/290 (44%), Gaps = 44/290 (15%)
Query: 8 KELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLN--LREVKCLRKLNHSNIVKL 65
K LG G+F V A + T AIK L++R+ E+ + RE + +L+H VKL
Sbjct: 39 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 98
Query: 66 KELIQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQNGFFHR 125
Q++ +LY + N L R F E + + ++ L Y+H G HR
Sbjct: 99 YFTFQDDEKLYFGLSYAK-NGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHR 157
Query: 126 DLKPENLLVSQGI-IKIADFGLAREI--KSGPPYTN-YVGSRWYRAPEILLQSELYSSKA 181
DLKPEN+L+++ + I+I DFG A+ + +S N +VG+ Y +PE+L + S +
Sbjct: 158 DLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSACKS-S 216
Query: 182 DMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQARAIKYQFPQL 241
D+WA+G I+ +L P F +E KI ++Y FP+
Sbjct: 217 DLWALGCIIYQLVAGLPPFRAGNEYLIFQKII-------------------KLEYDFPE- 256
Query: 242 PRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEA------LQHPFFK 285
P A L E L D +KR E HPFF+
Sbjct: 257 ------KFFPKAR----DLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFE 296
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 91.7 bits (226), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 84/290 (28%), Positives = 128/290 (44%), Gaps = 44/290 (15%)
Query: 8 KELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLN--LREVKCLRKLNHSNIVKL 65
K LG G+F V A + T AIK L++R+ E+ + RE + +L+H VKL
Sbjct: 36 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 95
Query: 66 KELIQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQNGFFHR 125
Q++ +LY + N L R F E + + ++ L Y+H G HR
Sbjct: 96 YFTFQDDEKLYFGLSYAK-NGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHR 154
Query: 126 DLKPENLLVSQGI-IKIADFGLAREI--KSGPPYTN-YVGSRWYRAPEILLQSELYSSKA 181
DLKPEN+L+++ + I+I DFG A+ + +S N +VG+ Y +PE+L + S +
Sbjct: 155 DLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVGTAQYVSPELLTEKSACKS-S 213
Query: 182 DMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQARAIKYQFPQL 241
D+WA+G I+ +L P F +E KI ++Y FP+
Sbjct: 214 DLWALGCIIYQLVAGLPPFRAGNEYLIFQKII-------------------KLEYDFPE- 253
Query: 242 PRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEA------LQHPFFK 285
P A L E L D +KR E HPFF+
Sbjct: 254 ------KFFPKAR----DLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFE 293
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 91.7 bits (226), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 84/290 (28%), Positives = 128/290 (44%), Gaps = 44/290 (15%)
Query: 8 KELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCL--NLREVKCLRKLNHSNIVKL 65
K LG G+F V A + T AIK L++R+ E+ + RE + +L+H VKL
Sbjct: 38 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 97
Query: 66 KELIQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQNGFFHR 125
Q++ +LY + N L R F E + + ++ L Y+H G HR
Sbjct: 98 YFTFQDDEKLYFGLSYAK-NGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHR 156
Query: 126 DLKPENLLVSQGI-IKIADFGLAREI--KSGPPYTN-YVGSRWYRAPEILLQSELYSSKA 181
DLKPEN+L+++ + I+I DFG A+ + +S N +VG+ Y +PE+L + S +
Sbjct: 157 DLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKS-S 215
Query: 182 DMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQARAIKYQFPQL 241
D+WA+G I+ +L P F +E KI ++Y FP+
Sbjct: 216 DLWALGCIIYQLVAGLPPFRAGNEYLIFQKII-------------------KLEYDFPE- 255
Query: 242 PRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEA------LQHPFFK 285
P A L E L D +KR E HPFF+
Sbjct: 256 ------KFFPKAR----DLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFE 295
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 91.3 bits (225), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 84/290 (28%), Positives = 128/290 (44%), Gaps = 44/290 (15%)
Query: 8 KELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLN--LREVKCLRKLNHSNIVKL 65
K LG G+F V A + T AIK L++R+ E+ + RE + +L+H VKL
Sbjct: 36 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 95
Query: 66 KELIQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQNGFFHR 125
Q++ +LY + N L R F E + + ++ L Y+H G HR
Sbjct: 96 YFTFQDDEKLYFGLSYAK-NGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHR 154
Query: 126 DLKPENLLVSQGI-IKIADFGLAREI--KSGPPYTN-YVGSRWYRAPEILLQSELYSSKA 181
DLKPEN+L+++ + I+I DFG A+ + +S N +VG+ Y +PE+L + S +
Sbjct: 155 DLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKS-S 213
Query: 182 DMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQARAIKYQFPQL 241
D+WA+G I+ +L P F +E KI ++Y FP+
Sbjct: 214 DLWALGCIIYQLVAGLPPFRAGNEYLIFQKII-------------------KLEYDFPE- 253
Query: 242 PRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEA------LQHPFFK 285
P A L E L D +KR E HPFF+
Sbjct: 254 ------KFFPKAR----DLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFE 293
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 91.3 bits (225), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 84/290 (28%), Positives = 128/290 (44%), Gaps = 44/290 (15%)
Query: 8 KELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLN--LREVKCLRKLNHSNIVKL 65
K LG G+F V A + T AIK L++R+ E+ + RE + +L+H VKL
Sbjct: 39 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 98
Query: 66 KELIQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQNGFFHR 125
Q++ +LY + N L R F E + + ++ L Y+H G HR
Sbjct: 99 YFTFQDDEKLYFGLSYAK-NGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHR 157
Query: 126 DLKPENLLVSQGI-IKIADFGLAREI--KSGPPYTN-YVGSRWYRAPEILLQSELYSSKA 181
DLKPEN+L+++ + I+I DFG A+ + +S N +VG+ Y +PE+L + S +
Sbjct: 158 DLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKS-S 216
Query: 182 DMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQARAIKYQFPQL 241
D+WA+G I+ +L P F +E KI ++Y FP+
Sbjct: 217 DLWALGCIIYQLVAGLPPFRAGNEYLIFQKII-------------------KLEYDFPE- 256
Query: 242 PRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEA------LQHPFFK 285
P A L E L D +KR E HPFF+
Sbjct: 257 ------KFFPKAR----DLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFE 296
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 91.3 bits (225), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 65/197 (32%), Positives = 108/197 (54%), Gaps = 15/197 (7%)
Query: 7 FKELGRGAFGRVFQAFDEHTGE-AVAIKELKQRYASWEDCLNLREVKCLRKLNHSNIVKL 65
KELG G FG V + + G+ VAIK +K+ S ++ + E K + L+H +V+L
Sbjct: 29 LKELGTGQFGVV--KYGKWRGQYDVAIKMIKEGSMSEDEFIE--EAKVMMNLSHEKLVQL 84
Query: 66 KELIQNNNRLYLVFECME--CNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQNGFF 123
+ ++++ E M C L L R R F ++ V + + Y+ F
Sbjct: 85 YGVCTKQRPIFIITEYMANGCLLNYLREMRHR--FQTQQLLEMCKDVCEAMEYLESKQFL 142
Query: 124 HRDLKPENLLVS-QGIIKIADFGLAREIKSGPPYTNYVGSRW---YRAPEILLQSELYSS 179
HRDL N LV+ QG++K++DFGL+R + YT+ VGS++ + PE+L+ S+ +SS
Sbjct: 143 HRDLAARNCLVNDQGVVKVSDFGLSRYVLD-DEYTSSVGSKFPVRWSPPEVLMYSK-FSS 200
Query: 180 KADMWAMGAIMAELFTF 196
K+D+WA G +M E+++
Sbjct: 201 KSDIWAFGVLMWEIYSL 217
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 91.3 bits (225), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 65/205 (31%), Positives = 106/205 (51%), Gaps = 19/205 (9%)
Query: 1 MDKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDC-LNLR-EVKCLRKLN 58
++ + + LG GA+G V A + T EAVA+K + + A DC N++ E+ + LN
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV--DCPENIKKEIXINKMLN 62
Query: 59 HSNIVKLKELIQNNNRLYLVFECMECNLYQLMAARDRKL-FSEPEIKAWLFQVFQGLSYM 117
H N+VK + N YL E C+ +L + + EP+ + + Q+ G+ Y+
Sbjct: 63 HENVVKFYGHRREGNIQYLFLEY--CSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYL 120
Query: 118 HQNGFFHRDLKPENLLVSQ-GIIKIADFGLAREIKSGPPYTN-------YVGSRWYRAPE 169
H G HRD+KPENLL+ + +KI+DFGLA + Y N G+ Y APE
Sbjct: 121 HGIGITHRDIKPENLLLDERDNLKISDFGLATVFR----YNNRERLLNKMXGTLPYVAPE 176
Query: 170 ILLQSELYSSKADMWAMGAIMAELF 194
+L + E ++ D+W+ G ++ +
Sbjct: 177 LLKRREFHAEPVDVWSCGIVLTAML 201
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 91.3 bits (225), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 84/290 (28%), Positives = 128/290 (44%), Gaps = 44/290 (15%)
Query: 8 KELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLN--LREVKCLRKLNHSNIVKL 65
K LG G+F V A + T AIK L++R+ E+ + RE + +L+H VKL
Sbjct: 36 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 95
Query: 66 KELIQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQNGFFHR 125
Q++ +LY + N L R F E + + ++ L Y+H G HR
Sbjct: 96 YFTFQDDEKLYFGLSYAK-NGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHR 154
Query: 126 DLKPENLLVSQGI-IKIADFGLAREI--KSGPPYTN-YVGSRWYRAPEILLQSELYSSKA 181
DLKPEN+L+++ + I+I DFG A+ + +S N +VG+ Y +PE+L + S +
Sbjct: 155 DLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKS-S 213
Query: 182 DMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQARAIKYQFPQL 241
D+WA+G I+ +L P F +E KI ++Y FP+
Sbjct: 214 DLWALGCIIYQLVAGLPPFRAGNEYLIFQKII-------------------KLEYDFPE- 253
Query: 242 PRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEA------LQHPFFK 285
P A L E L D +KR E HPFF+
Sbjct: 254 ------KFFPKAR----DLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFE 293
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 91.3 bits (225), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 65/205 (31%), Positives = 106/205 (51%), Gaps = 19/205 (9%)
Query: 1 MDKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDC-LNLR-EVKCLRKLN 58
++ + + LG GA+G V A + T EAVA+K + + A DC N++ E+ + LN
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV--DCPENIKKEIXINKMLN 62
Query: 59 HSNIVKLKELIQNNNRLYLVFECMECNLYQLMAARDRKL-FSEPEIKAWLFQVFQGLSYM 117
H N+VK + N YL E C+ +L + + EP+ + + Q+ G+ Y+
Sbjct: 63 HENVVKFYGHRREGNIQYLFLEY--CSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYL 120
Query: 118 HQNGFFHRDLKPENLLVSQ-GIIKIADFGLAREIKSGPPYTN-------YVGSRWYRAPE 169
H G HRD+KPENLL+ + +KI+DFGLA + Y N G+ Y APE
Sbjct: 121 HGIGITHRDIKPENLLLDERDNLKISDFGLATVFR----YNNRERLLNKMCGTLPYVAPE 176
Query: 170 ILLQSELYSSKADMWAMGAIMAELF 194
+L + E ++ D+W+ G ++ +
Sbjct: 177 LLKRREFHAEPVDVWSCGIVLTAML 201
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 91.3 bits (225), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 65/205 (31%), Positives = 106/205 (51%), Gaps = 19/205 (9%)
Query: 1 MDKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDC-LNLR-EVKCLRKLN 58
++ + + LG GA+G V A + T EAVA+K + + A DC N++ E+ + LN
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV--DCPENIKKEIXINKMLN 63
Query: 59 HSNIVKLKELIQNNNRLYLVFECMECNLYQLMAARDRKL-FSEPEIKAWLFQVFQGLSYM 117
H N+VK + N YL E C+ +L + + EP+ + + Q+ G+ Y+
Sbjct: 64 HENVVKFYGHRREGNIQYLFLEY--CSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYL 121
Query: 118 HQNGFFHRDLKPENLLVSQ-GIIKIADFGLAREIKSGPPYTN-------YVGSRWYRAPE 169
H G HRD+KPENLL+ + +KI+DFGLA + Y N G+ Y APE
Sbjct: 122 HGIGITHRDIKPENLLLDERDNLKISDFGLATVFR----YNNRERLLNKMXGTLPYVAPE 177
Query: 170 ILLQSELYSSKADMWAMGAIMAELF 194
+L + E ++ D+W+ G ++ +
Sbjct: 178 LLKRREFHAEPVDVWSCGIVLTAML 202
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 91.3 bits (225), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 84/290 (28%), Positives = 128/290 (44%), Gaps = 44/290 (15%)
Query: 8 KELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLN--LREVKCLRKLNHSNIVKL 65
K LG G+F V A + T AIK L++R+ E+ + RE + +L+H VKL
Sbjct: 38 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 97
Query: 66 KELIQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQNGFFHR 125
Q++ +LY + N L R F E + + ++ L Y+H G HR
Sbjct: 98 YFTFQDDEKLYFGLSYAK-NGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHR 156
Query: 126 DLKPENLLVSQGI-IKIADFGLAREI--KSGPPYTN-YVGSRWYRAPEILLQSELYSSKA 181
DLKPEN+L+++ + I+I DFG A+ + +S N +VG+ Y +PE+L + S +
Sbjct: 157 DLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKS-S 215
Query: 182 DMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQARAIKYQFPQL 241
D+WA+G I+ +L P F +E KI ++Y FP+
Sbjct: 216 DLWALGCIIYQLVAGLPPFRAGNEYLIFQKII-------------------KLEYDFPE- 255
Query: 242 PRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEA------LQHPFFK 285
P A L E L D +KR E HPFF+
Sbjct: 256 ------KFFPKAR----DLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFE 295
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 77/281 (27%), Positives = 128/281 (45%), Gaps = 37/281 (13%)
Query: 10 LGRGAFGRVFQAFDEHTGEAVAIKELKQR-YASWEDCLNLREVKCLRKLNHSNIVKLKEL 68
LG G FG+V + + TG +A K +K R E+ N E+ + +L+H+N+++L +
Sbjct: 97 LGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKN--EISVMNQLDHANLIQLYDA 154
Query: 69 IQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLF--QVFQGLSYMHQNGFFHRD 126
++ N + LV E ++ +L + ++ E+ LF Q+ +G+ +MHQ H D
Sbjct: 155 FESKNDIVLVMEYVDGG--ELFDRIIDESYNLTELDTILFMKQICEGIRHMHQMYILHLD 212
Query: 127 LKPENLLV---SQGIIKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQSELYSSKADM 183
LKPEN+L IKI DFGLAR K G+ + APE+ + + S DM
Sbjct: 213 LKPENILCVNRDAKQIKIIDFGLARRYKPREKLKVNFGTPEFLAPEV-VNYDFVSFPTDM 271
Query: 184 WAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQARAIKYQFPQLPR 243
W++G I L + F G ++A+ + I + + D
Sbjct: 272 WSVGVIAYMLLSGLSPFLGDNDAETLNNILACRWDLEDEEFQD----------------- 314
Query: 244 ANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFF 284
S++A L + S R +A+EAL+HP+
Sbjct: 315 ---------ISEEAKEFISKLLIKEKSWRISASEALKHPWL 346
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 80/289 (27%), Positives = 135/289 (46%), Gaps = 46/289 (15%)
Query: 10 LGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCL--NLREVKCLRKLNHSN-IVKLK 66
LG+G+FG+V A + T E AIK LK+ +D + + E + L L+ + +L
Sbjct: 27 LGKGSFGKVMLADRKGTEELYAIKILKKDVVIQDDDVECTMVEKRVLALLDKPPFLTQLH 86
Query: 67 ELIQNNNRLYLVFECMECN--LYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQNGFFH 124
Q +RLY V E + +Y + F EP+ + ++ GL ++H+ G +
Sbjct: 87 SCFQTVDRLYFVMEYVNGGDLMYHIQQVGK---FKEPQAVFYAAEISIGLFFLHKRGIIY 143
Query: 125 RDLKPENLLV-SQGIIKIADFGLARE-IKSGPPYTNYVGSRWYRAPEILLQSELYSSKAD 182
RDLK +N+++ S+G IKIADFG+ +E + G + G+ Y APEI+ + Y D
Sbjct: 144 RDLKLDNVMLDSEGHIKIADFGMCKEHMMDGVTTREFCGTPDYIAPEII-AYQPYGKSVD 202
Query: 183 MWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQARAIKYQFPQLP 242
WA G ++ E+ P F G E D+++ ++I P
Sbjct: 203 WWAYGVLLYEMLAGQPPFDGEDE-DELF---------------------QSIMEHNVSYP 240
Query: 243 RANLSALMPSASQDAISLFESLCSWDPSKRPTAA-----EALQHPFFKR 286
+ S S++A+S+ + L + P+KR + +H FF+R
Sbjct: 241 K--------SLSKEAVSICKGLMTKHPAKRLGCGPEGERDVREHAFFRR 281
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 84/290 (28%), Positives = 128/290 (44%), Gaps = 44/290 (15%)
Query: 8 KELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLNL--REVKCLRKLNHSNIVKL 65
K LG G+F V A + T AIK L++R+ E+ + RE + +L+H VKL
Sbjct: 13 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 72
Query: 66 KELIQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQNGFFHR 125
Q++ +LY + N L R F E + + ++ L Y+H G HR
Sbjct: 73 YFTFQDDEKLYFGLSYAK-NGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHR 131
Query: 126 DLKPENLLVSQGI-IKIADFGLAREI--KSGPPYTN-YVGSRWYRAPEILLQSELYSSKA 181
DLKPEN+L+++ + I+I DFG A+ + +S N +VG+ Y +PE+L + S +
Sbjct: 132 DLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKS-S 190
Query: 182 DMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQARAIKYQFPQL 241
D+WA+G I+ +L P F +E KI ++Y FP+
Sbjct: 191 DLWALGCIIYQLVAGLPPFRAGNEYLIFQKII-------------------KLEYDFPE- 230
Query: 242 PRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEA------LQHPFFK 285
P A L E L D +KR E HPFF+
Sbjct: 231 ------KFFPKAR----DLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFE 270
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 84/290 (28%), Positives = 128/290 (44%), Gaps = 44/290 (15%)
Query: 8 KELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLNL--REVKCLRKLNHSNIVKL 65
K LG G+F V A + T AIK L++R+ E+ + RE + +L+H VKL
Sbjct: 14 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 73
Query: 66 KELIQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQNGFFHR 125
Q++ +LY + N L R F E + + ++ L Y+H G HR
Sbjct: 74 YFTFQDDEKLYFGLSYAK-NGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHR 132
Query: 126 DLKPENLLVSQGI-IKIADFGLAREI--KSGPPYTN-YVGSRWYRAPEILLQSELYSSKA 181
DLKPEN+L+++ + I+I DFG A+ + +S N +VG+ Y +PE+L + S +
Sbjct: 133 DLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKS-S 191
Query: 182 DMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQARAIKYQFPQL 241
D+WA+G I+ +L P F +E KI ++Y FP+
Sbjct: 192 DLWALGCIIYQLVAGLPPFRAGNEYLIFQKII-------------------KLEYDFPE- 231
Query: 242 PRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEA------LQHPFFK 285
P A L E L D +KR E HPFF+
Sbjct: 232 ------KFFPKAR----DLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFE 271
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 84/290 (28%), Positives = 128/290 (44%), Gaps = 44/290 (15%)
Query: 8 KELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLN--LREVKCLRKLNHSNIVKL 65
K LG G+F V A + T AIK L++R+ E+ + RE + +L+H VKL
Sbjct: 16 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 75
Query: 66 KELIQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQNGFFHR 125
Q++ +LY + N L R F E + + ++ L Y+H G HR
Sbjct: 76 YFTFQDDEKLYFGLSYAK-NGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHR 134
Query: 126 DLKPENLLVSQGI-IKIADFGLAREI--KSGPPYTN-YVGSRWYRAPEILLQSELYSSKA 181
DLKPEN+L+++ + I+I DFG A+ + +S N +VG+ Y +PE+L + S +
Sbjct: 135 DLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKS-S 193
Query: 182 DMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQARAIKYQFPQL 241
D+WA+G I+ +L P F +E KI ++Y FP+
Sbjct: 194 DLWALGCIIYQLVAGLPPFRAGNEYLIFQKII-------------------KLEYDFPE- 233
Query: 242 PRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEA------LQHPFFK 285
P A L E L D +KR E HPFF+
Sbjct: 234 ------KFFPKAR----DLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFE 273
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 85/298 (28%), Positives = 130/298 (43%), Gaps = 44/298 (14%)
Query: 8 KELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCL--NLREVKCLRKLNHSNIVKL 65
K LG G+F V A + T AIK L++R+ E+ + RE + +L+H VKL
Sbjct: 20 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 79
Query: 66 KELIQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQNGFFHR 125
Q++ +LY + N L R F E + + ++ L Y+H G HR
Sbjct: 80 YFTFQDDEKLYFGLSYAK-NGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHR 138
Query: 126 DLKPENLLVSQGI-IKIADFGLAREI--KSGPPYTN-YVGSRWYRAPEILLQSELYSSKA 181
DLKPEN+L+++ + I+I DFG A+ + +S N +VG+ Y +PE+L + S +
Sbjct: 139 DLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKS-S 197
Query: 182 DMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQARAIKYQFPQL 241
D+WA+G I+ +L P F +E KI ++Y FP+
Sbjct: 198 DLWALGCIIYQLVAGLPPFRAGNEYLIFQKII-------------------KLEYDFPE- 237
Query: 242 PRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEA------LQHPFFKRCFYAPPH 293
P A L E L D +KR E HPFF+ + H
Sbjct: 238 ------KFFPKAR----DLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENLH 285
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/197 (32%), Positives = 108/197 (54%), Gaps = 15/197 (7%)
Query: 7 FKELGRGAFGRVFQAFDEHTGE-AVAIKELKQRYASWEDCLNLREVKCLRKLNHSNIVKL 65
KELG G FG V + + G+ VAIK +K+ S ++ + E K + L+H +V+L
Sbjct: 9 LKELGTGQFGVV--KYGKWRGQYDVAIKMIKEGSMSEDEFIE--EAKVMMNLSHEKLVQL 64
Query: 66 KELIQNNNRLYLVFECME--CNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQNGFF 123
+ ++++ E M C L L R R F ++ V + + Y+ F
Sbjct: 65 YGVCTKQRPIFIITEYMANGCLLNYLREMRHR--FQTQQLLEMCKDVCEAMEYLESKQFL 122
Query: 124 HRDLKPENLLVS-QGIIKIADFGLAREIKSGPPYTNYVGSRW---YRAPEILLQSELYSS 179
HRDL N LV+ QG++K++DFGL+R + YT+ VGS++ + PE+L+ S+ +SS
Sbjct: 123 HRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE-YTSSVGSKFPVRWSPPEVLMYSK-FSS 180
Query: 180 KADMWAMGAIMAELFTF 196
K+D+WA G +M E+++
Sbjct: 181 KSDIWAFGVLMWEIYSL 197
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/197 (32%), Positives = 108/197 (54%), Gaps = 15/197 (7%)
Query: 7 FKELGRGAFGRVFQAFDEHTGE-AVAIKELKQRYASWEDCLNLREVKCLRKLNHSNIVKL 65
KELG G FG V + + G+ VAIK +K+ S ++ + E K + L+H +V+L
Sbjct: 20 LKELGTGQFGVV--KYGKWRGQYDVAIKMIKEGSMSEDEFIE--EAKVMMNLSHEKLVQL 75
Query: 66 KELIQNNNRLYLVFECME--CNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQNGFF 123
+ ++++ E M C L L R R F ++ V + + Y+ F
Sbjct: 76 YGVCTKQRPIFIITEYMANGCLLNYLREMRHR--FQTQQLLEMCKDVCEAMEYLESKQFL 133
Query: 124 HRDLKPENLLVS-QGIIKIADFGLAREIKSGPPYTNYVGSRW---YRAPEILLQSELYSS 179
HRDL N LV+ QG++K++DFGL+R + YT+ VGS++ + PE+L+ S+ +SS
Sbjct: 134 HRDLAARNCLVNDQGVVKVSDFGLSRYVLD-DEYTSSVGSKFPVRWSPPEVLMYSK-FSS 191
Query: 180 KADMWAMGAIMAELFTF 196
K+D+WA G +M E+++
Sbjct: 192 KSDIWAFGVLMWEIYSL 208
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 84/290 (28%), Positives = 128/290 (44%), Gaps = 44/290 (15%)
Query: 8 KELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLN--LREVKCLRKLNHSNIVKL 65
K LG G+F V A + T AIK L++R+ E+ + RE + +L+H VKL
Sbjct: 15 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 74
Query: 66 KELIQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQNGFFHR 125
Q++ +LY + N L R F E + + ++ L Y+H G HR
Sbjct: 75 YFTFQDDEKLYFGLSYAK-NGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHR 133
Query: 126 DLKPENLLVSQGI-IKIADFGLAREI--KSGPPYTN-YVGSRWYRAPEILLQSELYSSKA 181
DLKPEN+L+++ + I+I DFG A+ + +S N +VG+ Y +PE+L + S +
Sbjct: 134 DLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKS-S 192
Query: 182 DMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQARAIKYQFPQL 241
D+WA+G I+ +L P F +E KI ++Y FP+
Sbjct: 193 DLWALGCIIYQLVAGLPPFRAGNEYLIFQKII-------------------KLEYDFPE- 232
Query: 242 PRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEA------LQHPFFK 285
P A L E L D +KR E HPFF+
Sbjct: 233 ------KFFPKAR----DLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFE 272
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/197 (32%), Positives = 108/197 (54%), Gaps = 15/197 (7%)
Query: 7 FKELGRGAFGRVFQAFDEHTGE-AVAIKELKQRYASWEDCLNLREVKCLRKLNHSNIVKL 65
KELG G FG V + + G+ VAIK +K+ S ++ + E K + L+H +V+L
Sbjct: 13 LKELGTGQFGVV--KYGKWRGQYDVAIKMIKEGSMSEDEFIE--EAKVMMNLSHEKLVQL 68
Query: 66 KELIQNNNRLYLVFECME--CNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQNGFF 123
+ ++++ E M C L L R R F ++ V + + Y+ F
Sbjct: 69 YGVCTKQRPIFIITEYMANGCLLNYLREMRHR--FQTQQLLEMCKDVCEAMEYLESKQFL 126
Query: 124 HRDLKPENLLVS-QGIIKIADFGLAREIKSGPPYTNYVGSRW---YRAPEILLQSELYSS 179
HRDL N LV+ QG++K++DFGL+R + YT+ VGS++ + PE+L+ S+ +SS
Sbjct: 127 HRDLAARNCLVNDQGVVKVSDFGLSRYVLD-DEYTSSVGSKFPVRWSPPEVLMYSK-FSS 184
Query: 180 KADMWAMGAIMAELFTF 196
K+D+WA G +M E+++
Sbjct: 185 KSDIWAFGVLMWEIYSL 201
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 84/290 (28%), Positives = 128/290 (44%), Gaps = 44/290 (15%)
Query: 8 KELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLN--LREVKCLRKLNHSNIVKL 65
K LG G+F V A + T AIK L++R+ E+ + RE + +L+H VKL
Sbjct: 43 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 102
Query: 66 KELIQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQNGFFHR 125
Q++ +LY + N L R F E + + ++ L Y+H G HR
Sbjct: 103 YFCFQDDEKLYFGLSYAK-NGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHR 161
Query: 126 DLKPENLLVSQGI-IKIADFGLAREI--KSGPPYTN-YVGSRWYRAPEILLQSELYSSKA 181
DLKPEN+L+++ + I+I DFG A+ + +S N +VG+ Y +PE+L + S +
Sbjct: 162 DLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKS-S 220
Query: 182 DMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQARAIKYQFPQL 241
D+WA+G I+ +L P F +E KI ++Y FP+
Sbjct: 221 DLWALGCIIYQLVAGLPPFRAGNEYLIFQKII-------------------KLEYDFPE- 260
Query: 242 PRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEA------LQHPFFK 285
P A L E L D +KR E HPFF+
Sbjct: 261 ------KFFPKAR----DLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFE 300
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 85/298 (28%), Positives = 130/298 (43%), Gaps = 44/298 (14%)
Query: 8 KELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCL--NLREVKCLRKLNHSNIVKL 65
K LG G+F V A + T AIK L++R+ E+ + RE + +L+H VKL
Sbjct: 35 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 94
Query: 66 KELIQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQNGFFHR 125
Q++ +LY + N L R F E + + ++ L Y+H G HR
Sbjct: 95 YFTFQDDEKLYFGLSYAK-NGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHR 153
Query: 126 DLKPENLLVSQGI-IKIADFGLAREI--KSGPPYTN-YVGSRWYRAPEILLQSELYSSKA 181
DLKPEN+L+++ + I+I DFG A+ + +S N +VG+ Y +PE+L + S +
Sbjct: 154 DLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSACKS-S 212
Query: 182 DMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQARAIKYQFPQL 241
D+WA+G I+ +L P F +E KI ++Y FP+
Sbjct: 213 DLWALGCIIYQLVAGLPPFRAGNEYLIFQKII-------------------KLEYDFPE- 252
Query: 242 PRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEA------LQHPFFKRCFYAPPH 293
P A L E L D +KR E HPFF+ + H
Sbjct: 253 ------KFFPKAR----DLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENLH 300
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 85/298 (28%), Positives = 130/298 (43%), Gaps = 44/298 (14%)
Query: 8 KELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCL--NLREVKCLRKLNHSNIVKL 65
K LG G+F V A + T AIK L++R+ E+ + RE + +L+H VKL
Sbjct: 35 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 94
Query: 66 KELIQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQNGFFHR 125
Q++ +LY + N L R F E + + ++ L Y+H G HR
Sbjct: 95 YFTFQDDEKLYFGLSYAK-NGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHR 153
Query: 126 DLKPENLLVSQGI-IKIADFGLAREI--KSGPPYTN-YVGSRWYRAPEILLQSELYSSKA 181
DLKPEN+L+++ + I+I DFG A+ + +S N +VG+ Y +PE+L + S +
Sbjct: 154 DLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKS-S 212
Query: 182 DMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQARAIKYQFPQL 241
D+WA+G I+ +L P F +E KI ++Y FP+
Sbjct: 213 DLWALGCIIYQLVAGLPPFRAGNEYLIFQKII-------------------KLEYDFPE- 252
Query: 242 PRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEA------LQHPFFKRCFYAPPH 293
P A L E L D +KR E HPFF+ + H
Sbjct: 253 ------KFFPKAR----DLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENLH 300
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/197 (32%), Positives = 108/197 (54%), Gaps = 15/197 (7%)
Query: 7 FKELGRGAFGRVFQAFDEHTGE-AVAIKELKQRYASWEDCLNLREVKCLRKLNHSNIVKL 65
KELG G FG V + + G+ VAIK +K+ S ++ + E K + L+H +V+L
Sbjct: 14 LKELGTGQFGVV--KYGKWRGQYDVAIKMIKEGSMSEDEFIE--EAKVMMNLSHEKLVQL 69
Query: 66 KELIQNNNRLYLVFECME--CNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQNGFF 123
+ ++++ E M C L L R R F ++ V + + Y+ F
Sbjct: 70 YGVCTKQRPIFIITEYMANGCLLNYLREMRHR--FQTQQLLEMCKDVCEAMEYLESKQFL 127
Query: 124 HRDLKPENLLVS-QGIIKIADFGLAREIKSGPPYTNYVGSRW---YRAPEILLQSELYSS 179
HRDL N LV+ QG++K++DFGL+R + YT+ VGS++ + PE+L+ S+ +SS
Sbjct: 128 HRDLAARNCLVNDQGVVKVSDFGLSRYVLD-DEYTSSVGSKFPVRWSPPEVLMYSK-FSS 185
Query: 180 KADMWAMGAIMAELFTF 196
K+D+WA G +M E+++
Sbjct: 186 KSDIWAFGVLMWEIYSL 202
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/195 (33%), Positives = 98/195 (50%), Gaps = 12/195 (6%)
Query: 2 DKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLNLREVKCLRKLNHSN 61
D+Y K++G G FG D+ + E VA+K +++ + RE+ R L H N
Sbjct: 19 DRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIAANVK--REIINHRSLRHPN 76
Query: 62 IVKLKELIQNNNRLYLVFECMECN-LYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQN 120
IV+ KE+I L +V E L++ + R FSE E + + Q+ G+SY H
Sbjct: 77 IVRFKEVILTPTHLAIVMEYASGGELFERICNAGR--FSEDEARFFFQQLISGVSYCHAM 134
Query: 121 GFFHRDLKPENLLVSQGI---IKIADFGLARE--IKSGPPYTNYVGSRWYRAPEILLQSE 175
HRDLK EN L+ +KI DFG ++ + S P T VG+ Y APE+LL+ E
Sbjct: 135 QVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKST--VGTPAYIAPEVLLKKE 192
Query: 176 LYSSKADMWAMGAIM 190
AD+W+ G +
Sbjct: 193 YDGKVADVWSCGVTL 207
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 76/239 (31%), Positives = 120/239 (50%), Gaps = 36/239 (15%)
Query: 8 KELGRGAFGRVFQAFD---EHTGEA--VAIKELKQRYASWEDCLNLREVKCLRKL-NHSN 61
K LG GAFG+V A TG + VA+K LK++ S E + E+K + +L +H N
Sbjct: 51 KVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHEN 110
Query: 62 IVKLKELIQNNNRLYLVFE-CMECNLYQLMAARDRKLFSEPEIK---------------- 104
IV L + +YL+FE C +L + ++ R+ FSE EI+
Sbjct: 111 IVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSK-REKFSEDEIEYENQKRLEEEEDLNVL 169
Query: 105 ------AWLFQVFQGLSYMHQNGFFHRDLKPENLLVSQG-IIKIADFGLAREIKSGPPYT 157
+ +QV +G+ ++ HRDL N+LV+ G ++KI DFGLAR+I S Y
Sbjct: 170 TFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARNVLVTHGKVVKICDFGLARDIMSDSNYV 229
Query: 158 NYVGSRW---YRAPEILLQSELYSSKADMWAMGAIMAELFTF-CPLFPGASEADQMYKI 212
+R + APE L + +Y+ K+D+W+ G ++ E+F+ +PG YK+
Sbjct: 230 VRGNARLPVKWMAPESLFEG-IYTIKSDVWSYGILLWEIFSLGVNPYPGIPVDANFYKL 287
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 62/197 (31%), Positives = 102/197 (51%), Gaps = 19/197 (9%)
Query: 8 KELGRGAFGRVFQAFDEHTG-----EAVAIKELKQRYASWEDCLNLREVKCLRKLNHSNI 62
+E+G G FG V H G + VAIK +++ S ED + E + + KL+H +
Sbjct: 13 QEIGSGQFGLV------HLGYWLNKDKVAIKTIREGAMSEEDFIE--EAEVMMKLSHPKL 64
Query: 63 VKLKELIQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQNGF 122
V+L + + LVFE ME R LF+ + V +G++Y+ +
Sbjct: 65 VQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEASV 124
Query: 123 FHRDLKPENLLVSQG-IIKIADFGLAREIKSGPPYTNYVGSRW---YRAPEILLQSELYS 178
HRDL N LV + +IK++DFG+ R + YT+ G+++ + +PE+ S YS
Sbjct: 125 IHRDLAARNCLVGENQVIKVSDFGMTRFVLD-DQYTSSTGTKFPVKWASPEVFSFSR-YS 182
Query: 179 SKADMWAMGAIMAELFT 195
SK+D+W+ G +M E+F+
Sbjct: 183 SKSDVWSFGVLMWEVFS 199
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 74/290 (25%), Positives = 135/290 (46%), Gaps = 46/290 (15%)
Query: 10 LGRGAFGRVFQAFDEHT--GEAVAIKELKQRYASWEDCLNLR-EVKCLRKLNHSNIVKLK 66
LG G++G+V + D T AV I + K+ N++ E++ LR+L H N+++L
Sbjct: 13 LGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLV 72
Query: 67 ELIQN--NNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQNGFFH 124
+++ N ++Y+V E C + +++ + K F + + Q+ GL Y+H G H
Sbjct: 73 DVLYNEEKQKMYMVMEYCVCGMQEMLDSVPEKRFPVCQAHGYFCQLIDGLEYLHSQGIVH 132
Query: 125 RDLKPENLLVSQ-GIIKIADFGLAREIKSGPPYT------NYVGSRWYRAPEILLQSELY 177
+D+KP NLL++ G +KI+ G+A + P+ GS ++ PEI + +
Sbjct: 133 KDIKPGNLLLTTGGTLKISALGVAEALH---PFAADDTCRTSQGSPAFQPPEIANGLDTF 189
Query: 178 SS-KADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQARAIKY 236
S K D+W+ G + + T L+P E D +YK+ +G + Y
Sbjct: 190 SGFKVDIWSAGVTLYNITTG--LYP--FEGDNIYKLFENIGKGS---------------Y 230
Query: 237 QFPQLPRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFFKR 286
P LS L + + ++P+KR + + QH +F++
Sbjct: 231 AIPGDCGPPLS-----------DLLKGMLEYEPAKRFSIRQIRQHSWFRK 269
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 75/286 (26%), Positives = 136/286 (47%), Gaps = 41/286 (14%)
Query: 9 ELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLNLREVKCLRKLNHSNIVKLKEL 68
+LG G +G V++ + VA+K LK+ E+ L +E ++++ H N+V+L +
Sbjct: 20 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFL--KEAAVMKEIKHPNLVQLLGV 77
Query: 69 IQNNNRLYLVFECMEC-NLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQNGFFHRDL 127
Y++ E M NL + +R+ S + Q+ + Y+ + F HRDL
Sbjct: 78 CTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDL 137
Query: 128 KPENLLVSQG-IIKIADFGLAREIKSGPPYTNYVGSRW---YRAPEILLQSELYSSKADM 183
N LV + ++K+ADFGL+R + +G YT + G+++ + APE L ++ +S K+D+
Sbjct: 138 AARNCLVGENHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAPESLAYNK-FSIKSDV 195
Query: 184 WAMGAIMAELFTF-CPLFPGASEADQMYKICGVLGSPTMDSWADGLRQARAIKYQFPQLP 242
WA G ++ E+ T+ +PG + Q+Y++ + + + P+
Sbjct: 196 WAFGVLLWEIATYGMSPYPGI-DLSQVYELL-----------------EKDYRMERPEGC 237
Query: 243 RANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFFKRCF 288
+ LM + Q W+PS RP+ AE H F+ F
Sbjct: 238 PEKVYELMRACWQ-----------WNPSDRPSFAEI--HQAFETMF 270
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 75/286 (26%), Positives = 136/286 (47%), Gaps = 41/286 (14%)
Query: 9 ELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLNLREVKCLRKLNHSNIVKLKEL 68
+LG G +G V++ + VA+K LK+ E+ L +E ++++ H N+V+L +
Sbjct: 20 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFL--KEAAVMKEIKHPNLVQLLGV 77
Query: 69 IQNNNRLYLVFECMEC-NLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQNGFFHRDL 127
Y++ E M NL + +R+ S + Q+ + Y+ + F HRDL
Sbjct: 78 CTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDL 137
Query: 128 KPENLLVSQG-IIKIADFGLAREIKSGPPYTNYVGSRW---YRAPEILLQSELYSSKADM 183
N LV + ++K+ADFGL+R + +G YT + G+++ + APE L ++ +S K+D+
Sbjct: 138 AARNCLVGENHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAPESLAYNK-FSIKSDV 195
Query: 184 WAMGAIMAELFTF-CPLFPGASEADQMYKICGVLGSPTMDSWADGLRQARAIKYQFPQLP 242
WA G ++ E+ T+ +PG + Q+Y++ + + + P+
Sbjct: 196 WAFGVLLWEIATYGMSPYPGI-DLSQVYELL-----------------EKDYRMERPEGC 237
Query: 243 RANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFFKRCF 288
+ LM + Q W+PS RP+ AE H F+ F
Sbjct: 238 PEKVYELMRACWQ-----------WNPSDRPSFAEI--HQAFETMF 270
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/199 (33%), Positives = 98/199 (49%), Gaps = 8/199 (4%)
Query: 2 DKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLN--LREVKCLRKLNH 59
D + F+ LGRG FG VF + TG+ A K+L ++ + E K L K++
Sbjct: 185 DWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHS 244
Query: 60 SNIVKLKELIQNNNRLYLVFECM---ECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSY 116
IV L + L LV M + + D F EP + Q+ GL +
Sbjct: 245 RFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEH 304
Query: 117 MHQNGFFHRDLKPENLLV-SQGIIKIADFGLAREIKSGPPYT-NYVGSRWYRAPEILLQS 174
+HQ +RDLKPEN+L+ G ++I+D GLA E+K+G T Y G+ + APE+LL
Sbjct: 305 LHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGE 364
Query: 175 ELYSSKADMWAMGAIMAEL 193
E Y D +A+G + E+
Sbjct: 365 E-YDFSVDYFALGVTLYEM 382
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/199 (33%), Positives = 98/199 (49%), Gaps = 8/199 (4%)
Query: 2 DKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLN--LREVKCLRKLNH 59
D + F+ LGRG FG VF + TG+ A K+L ++ + E K L K++
Sbjct: 185 DWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHS 244
Query: 60 SNIVKLKELIQNNNRLYLVFECM---ECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSY 116
IV L + L LV M + + D F EP + Q+ GL +
Sbjct: 245 RFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEH 304
Query: 117 MHQNGFFHRDLKPENLLV-SQGIIKIADFGLAREIKSGPPYT-NYVGSRWYRAPEILLQS 174
+HQ +RDLKPEN+L+ G ++I+D GLA E+K+G T Y G+ + APE+LL
Sbjct: 305 LHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGE 364
Query: 175 ELYSSKADMWAMGAIMAEL 193
E Y D +A+G + E+
Sbjct: 365 E-YDFSVDYFALGVTLYEM 382
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/199 (33%), Positives = 98/199 (49%), Gaps = 8/199 (4%)
Query: 2 DKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLN--LREVKCLRKLNH 59
D + F+ LGRG FG VF + TG+ A K+L ++ + E K L K++
Sbjct: 185 DWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHS 244
Query: 60 SNIVKLKELIQNNNRLYLVFECM---ECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSY 116
IV L + L LV M + + D F EP + Q+ GL +
Sbjct: 245 RFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEH 304
Query: 117 MHQNGFFHRDLKPENLLV-SQGIIKIADFGLAREIKSGPPYT-NYVGSRWYRAPEILLQS 174
+HQ +RDLKPEN+L+ G ++I+D GLA E+K+G T Y G+ + APE+LL
Sbjct: 305 LHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGE 364
Query: 175 ELYSSKADMWAMGAIMAEL 193
E Y D +A+G + E+
Sbjct: 365 E-YDFSVDYFALGVTLYEM 382
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/199 (33%), Positives = 98/199 (49%), Gaps = 8/199 (4%)
Query: 2 DKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLN--LREVKCLRKLNH 59
D + F+ LGRG FG VF + TG+ A K+L ++ + E K L K++
Sbjct: 185 DWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHS 244
Query: 60 SNIVKLKELIQNNNRLYLVFECM---ECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSY 116
IV L + L LV M + + D F EP + Q+ GL +
Sbjct: 245 RFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEH 304
Query: 117 MHQNGFFHRDLKPENLLV-SQGIIKIADFGLAREIKSGPPYT-NYVGSRWYRAPEILLQS 174
+HQ +RDLKPEN+L+ G ++I+D GLA E+K+G T Y G+ + APE+LL
Sbjct: 305 LHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGE 364
Query: 175 ELYSSKADMWAMGAIMAEL 193
E Y D +A+G + E+
Sbjct: 365 E-YDFSVDYFALGVTLYEM 382
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 75/286 (26%), Positives = 136/286 (47%), Gaps = 41/286 (14%)
Query: 9 ELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLNLREVKCLRKLNHSNIVKLKEL 68
+LG G +G V++ + VA+K LK+ E+ L +E ++++ H N+V+L +
Sbjct: 25 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFL--KEAAVMKEIKHPNLVQLLGV 82
Query: 69 IQNNNRLYLVFECMEC-NLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQNGFFHRDL 127
Y++ E M NL + +R+ S + Q+ + Y+ + F HRDL
Sbjct: 83 CTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDL 142
Query: 128 KPENLLVSQG-IIKIADFGLAREIKSGPPYTNYVGSRW---YRAPEILLQSELYSSKADM 183
N LV + ++K+ADFGL+R + +G YT + G+++ + APE L ++ +S K+D+
Sbjct: 143 AARNCLVGENHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAPESLAYNK-FSIKSDV 200
Query: 184 WAMGAIMAELFTF-CPLFPGASEADQMYKICGVLGSPTMDSWADGLRQARAIKYQFPQLP 242
WA G ++ E+ T+ +PG + Q+Y++ + + + P+
Sbjct: 201 WAFGVLLWEIATYGMSPYPGI-DLSQVYELL-----------------EKDYRMERPEGC 242
Query: 243 RANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFFKRCF 288
+ LM + Q W+PS RP+ AE H F+ F
Sbjct: 243 PEKVYELMRACWQ-----------WNPSDRPSFAEI--HQAFETMF 275
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/204 (31%), Positives = 115/204 (56%), Gaps = 14/204 (6%)
Query: 8 KELGRGAFGRVFQA-FDEHTGEAVAIKELKQRYASWEDCLNLREVKCLRKLNHSNIVKLK 66
K+LG G FG V+ A +++HT VA+K +K S E L E ++ L H +VKL
Sbjct: 194 KKLGAGQFGEVWMATYNKHT--KVAVKTMKPGSMSVEAFLA--EANVMKTLQHDKLVKLH 249
Query: 67 ELIQNNNRLYLVFECM-ECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQNGFFHR 125
++ +Y++ E M + +L + + + P++ + Q+ +G++++ Q + HR
Sbjct: 250 AVV-TKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHR 308
Query: 126 DLKPENLLVSQGII-KIADFGLAREIKSGPPYTNYVGSRW---YRAPEILLQSELYSSKA 181
DL+ N+LVS ++ KIADFGLAR I+ YT G+++ + APE + ++ K+
Sbjct: 309 DLRAANILVSASLVCKIADFGLARVIEDN-EYTAREGAKFPIKWTAPE-AINFGSFTIKS 366
Query: 182 DMWAMGAIMAELFTFCPL-FPGAS 204
D+W+ G ++ E+ T+ + +PG S
Sbjct: 367 DVWSFGILLMEIVTYGRIPYPGMS 390
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 83/291 (28%), Positives = 139/291 (47%), Gaps = 38/291 (13%)
Query: 10 LGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLNLREVK---CLRKLNHSNIVKLK 66
+GRG++ +V + T A+K +K+ + ++ ++ + + + NH +V L
Sbjct: 17 IGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLH 76
Query: 67 ELIQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLF--QVFQGLSYMHQNGFFH 124
Q +RL+ V E + R RKL PE A + ++ L+Y+H+ G +
Sbjct: 77 SCFQTESRLFFVIEYVNGGDLMFHMQRQRKL---PEEHARFYSAEISLALNYLHERGIIY 133
Query: 125 RDLKPENLLV-SQGIIKIADFGLARE-IKSGPPYTNYVGSRWYRAPEILLQSELYSSKAD 182
RDLK +N+L+ S+G IK+ D+G+ +E ++ G + + G+ Y APEI L+ E Y D
Sbjct: 134 RDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEI-LRGEDYGFSVD 192
Query: 183 MWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQARAIKYQFPQLP 242
WA+G +M E+ G S D I G +P ++ D L Q I + ++P
Sbjct: 193 WWALGVLMFEMMA------GRSPFD----IVGSSDNPDQNT-EDYLFQ--VILEKQIRIP 239
Query: 243 RANLSALMPSASQDAISLFESLCSWDPSKR----PTA--AEALQHPFFKRC 287
R S S A S+ +S + DP +R P A+ HPFF+
Sbjct: 240 R--------SLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRNV 282
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 83/290 (28%), Positives = 127/290 (43%), Gaps = 44/290 (15%)
Query: 8 KELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLN--LREVKCLRKLNHSNIVKL 65
K LG G+F A + T AIK L++R+ E+ + RE + +L+H VKL
Sbjct: 36 KILGEGSFSTTVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 95
Query: 66 KELIQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQNGFFHR 125
Q++ +LY + N L R F E + + ++ L Y+H G HR
Sbjct: 96 YFTFQDDEKLYFGLSYAK-NGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHR 154
Query: 126 DLKPENLLVSQGI-IKIADFGLAREI--KSGPPYTN-YVGSRWYRAPEILLQSELYSSKA 181
DLKPEN+L+++ + I+I DFG A+ + +S N +VG+ Y +PE+L + S +
Sbjct: 155 DLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKS-S 213
Query: 182 DMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQARAIKYQFPQL 241
D+WA+G I+ +L P F +E KI ++Y FP+
Sbjct: 214 DLWALGCIIYQLVAGLPPFRAGNEYLIFQKII-------------------KLEYDFPE- 253
Query: 242 PRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEA------LQHPFFK 285
P A L E L D +KR E HPFF+
Sbjct: 254 ------KFFPKAR----DLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFE 293
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 83/291 (28%), Positives = 139/291 (47%), Gaps = 38/291 (13%)
Query: 10 LGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLNLREVK---CLRKLNHSNIVKLK 66
+GRG++ +V + T A+K +K+ + ++ ++ + + + NH +V L
Sbjct: 28 IGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLH 87
Query: 67 ELIQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLF--QVFQGLSYMHQNGFFH 124
Q +RL+ V E + R RKL PE A + ++ L+Y+H+ G +
Sbjct: 88 SCFQTESRLFFVIEYVNGGDLMFHMQRQRKL---PEEHARFYSAEISLALNYLHERGIIY 144
Query: 125 RDLKPENLLV-SQGIIKIADFGLARE-IKSGPPYTNYVGSRWYRAPEILLQSELYSSKAD 182
RDLK +N+L+ S+G IK+ D+G+ +E ++ G + + G+ Y APEI L+ E Y D
Sbjct: 145 RDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEI-LRGEDYGFSVD 203
Query: 183 MWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQARAIKYQFPQLP 242
WA+G +M E+ G S D I G +P ++ D L Q I + ++P
Sbjct: 204 WWALGVLMFEMMA------GRSPFD----IVGSSDNPDQNT-EDYLFQ--VILEKQIRIP 250
Query: 243 RANLSALMPSASQDAISLFESLCSWDPSKR----PTA--AEALQHPFFKRC 287
R S S A S+ +S + DP +R P A+ HPFF+
Sbjct: 251 R--------SMSVKAASVLKSFLNKDPKERLGCLPQTGFADIQGHPFFRNV 293
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 81/296 (27%), Positives = 132/296 (44%), Gaps = 49/296 (16%)
Query: 2 DKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLNLREVKCLRKLNHSN 61
D Y +++G G++ + + T A+K + + S D E+ LR H N
Sbjct: 22 DGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDK---SKRDPTEEIEI-LLRYGQHPN 77
Query: 62 IVKLKELIQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQNG 121
I+ LK++ + +Y+V E M+ R +K FSE E A LF + + + Y+H G
Sbjct: 78 IITLKDVYDDGKYVYVVTELMKGGELLDKILR-QKFFSEREASAVLFTITKTVEYLHAQG 136
Query: 122 FFHRDLKPENLLVSQ-----GIIKIADFGLAREIKS------GPPYT-NYVGSRWYRAPE 169
HRDLKP N+L I+I DFG A+++++ P YT N+V APE
Sbjct: 137 VVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLMTPCYTANFV------APE 190
Query: 170 ILLQSELYSSKADMWAMGAIMAELFT-FCPLFPGASEADQMYKICGVLGSPTMDSWADGL 228
+ L+ + Y + D+W++G ++ + T + P G + + +I +GS S + G
Sbjct: 191 V-LERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPE--EILARIGSGKF-SLSGGY 246
Query: 229 RQARAIKYQFPQLPRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFF 284
S S A L + DP +R TAA L+HP+
Sbjct: 247 WN---------------------SVSDTAKDLVSKMLHVDPHQRLTAALVLRHPWI 281
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 64/204 (31%), Positives = 115/204 (56%), Gaps = 14/204 (6%)
Query: 8 KELGRGAFGRVFQA-FDEHTGEAVAIKELKQRYASWEDCLNLREVKCLRKLNHSNIVKLK 66
K+LG G FG V+ A +++HT VA+K +K S E L E ++ L H +VKL
Sbjct: 21 KKLGAGQFGEVWMATYNKHT--KVAVKTMKPGSMSVEAFLA--EANVMKTLQHDKLVKLH 76
Query: 67 ELIQNNNRLYLVFECM-ECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQNGFFHR 125
++ +Y++ E M + +L + + + P++ + Q+ +G++++ Q + HR
Sbjct: 77 AVV-TKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHR 135
Query: 126 DLKPENLLVSQGII-KIADFGLAREIKSGPPYTNYVGSRW---YRAPEILLQSELYSSKA 181
DL+ N+LVS ++ KIADFGLAR I+ YT G+++ + APE + ++ K+
Sbjct: 136 DLRAANILVSASLVCKIADFGLARVIEDN-EYTAREGAKFPIKWTAPE-AINFGSFTIKS 193
Query: 182 DMWAMGAIMAELFTFCPL-FPGAS 204
D+W+ G ++ E+ T+ + +PG S
Sbjct: 194 DVWSFGILLMEIVTYGRIPYPGMS 217
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 75/286 (26%), Positives = 136/286 (47%), Gaps = 41/286 (14%)
Query: 9 ELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLNLREVKCLRKLNHSNIVKLKEL 68
+LG G +G V++ + VA+K LK+ E+ L +E ++++ H N+V+L +
Sbjct: 20 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFL--KEAAVMKEIKHPNLVQLLGV 77
Query: 69 IQNNNRLYLVFECMEC-NLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQNGFFHRDL 127
Y++ E M NL + +R+ S + Q+ + Y+ + F HRDL
Sbjct: 78 CTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDL 137
Query: 128 KPENLLVSQG-IIKIADFGLAREIKSGPPYTNYVGSRW---YRAPEILLQSELYSSKADM 183
N LV + ++K+ADFGL+R + +G YT + G+++ + APE L ++ +S K+D+
Sbjct: 138 AARNCLVGENHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAPESLAYNK-FSIKSDV 195
Query: 184 WAMGAIMAELFTF-CPLFPGASEADQMYKICGVLGSPTMDSWADGLRQARAIKYQFPQLP 242
WA G ++ E+ T+ +PG + Q+Y++ + + + P+
Sbjct: 196 WAFGVLLWEIATYGMSPYPGI-DLSQVYELL-----------------EKDYRMERPEGC 237
Query: 243 RANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFFKRCF 288
+ LM + Q W+PS RP+ AE H F+ F
Sbjct: 238 PEKVYELMRACWQ-----------WNPSDRPSFAEI--HQAFETMF 270
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 83/291 (28%), Positives = 139/291 (47%), Gaps = 38/291 (13%)
Query: 10 LGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLNLREVK---CLRKLNHSNIVKLK 66
+GRG++ +V + T A+K +K+ + ++ ++ + + + NH +V L
Sbjct: 13 IGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLH 72
Query: 67 ELIQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLF--QVFQGLSYMHQNGFFH 124
Q +RL+ V E + R RKL PE A + ++ L+Y+H+ G +
Sbjct: 73 SCFQTESRLFFVIEYVNGGDLMFHMQRQRKL---PEEHARFYSAEISLALNYLHERGIIY 129
Query: 125 RDLKPENLLV-SQGIIKIADFGLARE-IKSGPPYTNYVGSRWYRAPEILLQSELYSSKAD 182
RDLK +N+L+ S+G IK+ D+G+ +E ++ G + + G+ Y APEI L+ E Y D
Sbjct: 130 RDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEI-LRGEDYGFSVD 188
Query: 183 MWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQARAIKYQFPQLP 242
WA+G +M E+ G S D I G +P ++ D L Q I + ++P
Sbjct: 189 WWALGVLMFEMMA------GRSPFD----IVGSSDNPDQNT-EDYLFQ--VILEKQIRIP 235
Query: 243 RANLSALMPSASQDAISLFESLCSWDPSKR----PTA--AEALQHPFFKRC 287
R S S A S+ +S + DP +R P A+ HPFF+
Sbjct: 236 R--------SLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRNV 278
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 62/197 (31%), Positives = 102/197 (51%), Gaps = 19/197 (9%)
Query: 8 KELGRGAFGRVFQAFDEHTG-----EAVAIKELKQRYASWEDCLNLREVKCLRKLNHSNI 62
+E+G G FG V H G + VAIK +K+ S +D + E + + KL+H +
Sbjct: 33 QEIGSGQFGLV------HLGYWLNKDKVAIKTIKEGSMSEDDFIE--EAEVMMKLSHPKL 84
Query: 63 VKLKELIQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQNGF 122
V+L + + LVFE ME R LF+ + V +G++Y+ +
Sbjct: 85 VQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACV 144
Query: 123 FHRDLKPENLLVSQG-IIKIADFGLAREIKSGPPYTNYVGSRW---YRAPEILLQSELYS 178
HRDL N LV + +IK++DFG+ R + YT+ G+++ + +PE+ S YS
Sbjct: 145 IHRDLAARNCLVGENQVIKVSDFGMTRFVLD-DQYTSSTGTKFPVKWASPEVFSFSR-YS 202
Query: 179 SKADMWAMGAIMAELFT 195
SK+D+W+ G +M E+F+
Sbjct: 203 SKSDVWSFGVLMWEVFS 219
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 75/286 (26%), Positives = 136/286 (47%), Gaps = 41/286 (14%)
Query: 9 ELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLNLREVKCLRKLNHSNIVKLKEL 68
+LG G +G V++ + VA+K LK+ E+ L +E ++++ H N+V+L +
Sbjct: 20 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFL--KEAAVMKEIKHPNLVQLLGV 77
Query: 69 IQNNNRLYLVFECMEC-NLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQNGFFHRDL 127
Y++ E M NL + +R+ S + Q+ + Y+ + F HRDL
Sbjct: 78 CTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDL 137
Query: 128 KPENLLVSQG-IIKIADFGLAREIKSGPPYTNYVGSRW---YRAPEILLQSELYSSKADM 183
N LV + ++K+ADFGL+R + +G YT + G+++ + APE L ++ +S K+D+
Sbjct: 138 AARNCLVGENHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAPESLAYNK-FSIKSDV 195
Query: 184 WAMGAIMAELFTF-CPLFPGASEADQMYKICGVLGSPTMDSWADGLRQARAIKYQFPQLP 242
WA G ++ E+ T+ +PG + Q+Y++ + + + P+
Sbjct: 196 WAFGVLLWEIATYGMSPYPGI-DLSQVYELL-----------------EKDYRMERPEGC 237
Query: 243 RANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFFKRCF 288
+ LM + Q W+PS RP+ AE H F+ F
Sbjct: 238 PEKVYELMRACWQ-----------WNPSDRPSFAEI--HQAFETMF 270
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 68/221 (30%), Positives = 110/221 (49%), Gaps = 16/221 (7%)
Query: 7 FKELGRGAFGRVFQAFDEHTGEAV--AIKELKQRY----ASWEDCLNLREVKCLRKLNHS 60
K +G+G+FG+V A H E V A+K L+++ + ++ R V L+ + H
Sbjct: 43 LKVIGKGSFGKVLLA--RHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNV-LLKNVKHP 99
Query: 61 NIVKLKELIQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQN 120
+V L Q ++LY V + + R+R F EP + + ++ L Y+H
Sbjct: 100 FLVGLHFSFQTADKLYFVLDYINGGELFYHLQRER-CFLEPRARFYAAEIASALGYLHSL 158
Query: 121 GFFHRDLKPENLLV-SQGIIKIADFGLARE-IKSGPPYTNYVGSRWYRAPEILLQSELYS 178
+RDLKPEN+L+ SQG I + DFGL +E I+ + + G+ Y APE+ L + Y
Sbjct: 159 NIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNSTTSTFCGTPEYLAPEV-LHKQPYD 217
Query: 179 SKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSP 219
D W +GA++ E+ P F + A +MY +L P
Sbjct: 218 RTVDWWCLGAVLYEMLYGLPPFYSRNTA-EMYD--NILNKP 255
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 62/197 (31%), Positives = 102/197 (51%), Gaps = 19/197 (9%)
Query: 8 KELGRGAFGRVFQAFDEHTG-----EAVAIKELKQRYASWEDCLNLREVKCLRKLNHSNI 62
+E+G G FG V H G + VAIK +++ S ED + E + + KL+H +
Sbjct: 13 QEIGSGQFGLV------HLGYWLNKDKVAIKTIREGAMSEEDFIE--EAEVMMKLSHPKL 64
Query: 63 VKLKELIQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQNGF 122
V+L + + LVFE ME R LF+ + V +G++Y+ +
Sbjct: 65 VQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACV 124
Query: 123 FHRDLKPENLLVSQG-IIKIADFGLAREIKSGPPYTNYVGSRW---YRAPEILLQSELYS 178
HRDL N LV + +IK++DFG+ R + YT+ G+++ + +PE+ S YS
Sbjct: 125 IHRDLAARNCLVGENQVIKVSDFGMTRFVLD-DQYTSSTGTKFPVKWASPEVFSFSR-YS 182
Query: 179 SKADMWAMGAIMAELFT 195
SK+D+W+ G +M E+F+
Sbjct: 183 SKSDVWSFGVLMWEVFS 199
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 82/291 (28%), Positives = 139/291 (47%), Gaps = 38/291 (13%)
Query: 10 LGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLNLREVK---CLRKLNHSNIVKLK 66
+GRG++ +V + T A++ +K+ + ++ ++ + + + NH +V L
Sbjct: 60 IGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLH 119
Query: 67 ELIQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLF--QVFQGLSYMHQNGFFH 124
Q +RL+ V E + R RKL PE A + ++ L+Y+H+ G +
Sbjct: 120 SCFQTESRLFFVIEYVNGGDLMFHMQRQRKL---PEEHARFYSAEISLALNYLHERGIIY 176
Query: 125 RDLKPENLLV-SQGIIKIADFGLARE-IKSGPPYTNYVGSRWYRAPEILLQSELYSSKAD 182
RDLK +N+L+ S+G IK+ D+G+ +E ++ G + + G+ Y APEI L+ E Y D
Sbjct: 177 RDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSTFCGTPNYIAPEI-LRGEDYGFSVD 235
Query: 183 MWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQARAIKYQFPQLP 242
WA+G +M E+ G S D I G +P ++ D L Q I + ++P
Sbjct: 236 WWALGVLMFEMMA------GRSPFD----IVGSSDNPDQNT-EDYLFQ--VILEKQIRIP 282
Query: 243 RANLSALMPSASQDAISLFESLCSWDPSKR----PTA--AEALQHPFFKRC 287
R S S A S+ +S + DP +R P A+ HPFF+
Sbjct: 283 R--------SLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRNV 325
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 66/195 (33%), Positives = 98/195 (50%), Gaps = 12/195 (6%)
Query: 2 DKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLNLREVKCLRKLNHSN 61
D+Y K++G G FG D+ + E VA+K +++ E+ RE+ R L H N
Sbjct: 19 DRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVK--REIINHRSLRHPN 76
Query: 62 IVKLKELIQNNNRLYLVFECMEC-NLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQN 120
IV+ KE+I L +V E L++ + R FSE E + + Q+ G+SY H
Sbjct: 77 IVRFKEVILTPTHLAIVMEYASGGELFERICNAGR--FSEDEARFFFQQLISGVSYCHAM 134
Query: 121 GFFHRDLKPENLLVSQGI---IKIADFGLARE--IKSGPPYTNYVGSRWYRAPEILLQSE 175
HRDLK EN L+ +KI FG ++ + S P T VG+ Y APE+LL+ E
Sbjct: 135 QVCHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQPKST--VGTPAYIAPEVLLKKE 192
Query: 176 LYSSKADMWAMGAIM 190
AD+W+ G +
Sbjct: 193 YDGKVADVWSCGVTL 207
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 62/197 (31%), Positives = 102/197 (51%), Gaps = 19/197 (9%)
Query: 8 KELGRGAFGRVFQAFDEHTG-----EAVAIKELKQRYASWEDCLNLREVKCLRKLNHSNI 62
+E+G G FG V H G + VAIK +++ S ED + E + + KL+H +
Sbjct: 11 QEIGSGQFGLV------HLGYWLNKDKVAIKTIREGAMSEEDFIE--EAEVMMKLSHPKL 62
Query: 63 VKLKELIQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQNGF 122
V+L + + LVFE ME R LF+ + V +G++Y+ +
Sbjct: 63 VQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACV 122
Query: 123 FHRDLKPENLLVSQG-IIKIADFGLAREIKSGPPYTNYVGSRW---YRAPEILLQSELYS 178
HRDL N LV + +IK++DFG+ R + YT+ G+++ + +PE+ S YS
Sbjct: 123 IHRDLAARNCLVGENQVIKVSDFGMTRFVLD-DQYTSSTGTKFPVKWASPEVFSFSR-YS 180
Query: 179 SKADMWAMGAIMAELFT 195
SK+D+W+ G +M E+F+
Sbjct: 181 SKSDVWSFGVLMWEVFS 197
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 69/193 (35%), Positives = 103/193 (53%), Gaps = 17/193 (8%)
Query: 10 LGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLNLREVKCLRKLNHSNIVKLKELI 69
+GRGAFG V +A + + VAIK+++ + LR+ L ++NH NIVKL
Sbjct: 17 VGRGAFGVVCKA--KWRAKDVAIKQIESESERKAFIVELRQ---LSRVNHPNIVKLYGAC 71
Query: 70 QNNNRLYLVFECMEC-NLYQLM-AARDRKLFSEPEIKAWLFQVFQGLSYMHQ---NGFFH 124
N + LV E E +LY ++ A ++ +W Q QG++Y+H H
Sbjct: 72 LNP--VCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIH 129
Query: 125 RDLKPENLLVSQG--IIKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQSELYSSKAD 182
RDLKP NLL+ G ++KI DFG A +I++ TN GS + APE+ S YS K D
Sbjct: 130 RDLKPPNLLLVAGGTVLKICDFGTACDIQTH--MTNNKGSAAWMAPEVFEGSN-YSEKCD 186
Query: 183 MWAMGAIMAELFT 195
+++ G I+ E+ T
Sbjct: 187 VFSWGIILWEVIT 199
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 62/197 (31%), Positives = 102/197 (51%), Gaps = 19/197 (9%)
Query: 8 KELGRGAFGRVFQAFDEHTG-----EAVAIKELKQRYASWEDCLNLREVKCLRKLNHSNI 62
+E+G G FG V H G + VAIK +++ S ED + E + + KL+H +
Sbjct: 16 QEIGSGQFGLV------HLGYWLNKDKVAIKTIREGAMSEEDFIE--EAEVMMKLSHPKL 67
Query: 63 VKLKELIQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQNGF 122
V+L + + LVFE ME R LF+ + V +G++Y+ +
Sbjct: 68 VQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACV 127
Query: 123 FHRDLKPENLLVSQG-IIKIADFGLAREIKSGPPYTNYVGSRW---YRAPEILLQSELYS 178
HRDL N LV + +IK++DFG+ R + YT+ G+++ + +PE+ S YS
Sbjct: 128 IHRDLAARNCLVGENQVIKVSDFGMTRFVLD-DQYTSSTGTKFPVKWASPEVFSFSR-YS 185
Query: 179 SKADMWAMGAIMAELFT 195
SK+D+W+ G +M E+F+
Sbjct: 186 SKSDVWSFGVLMWEVFS 202
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 72/286 (25%), Positives = 134/286 (46%), Gaps = 41/286 (14%)
Query: 9 ELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLNLREVKCLRKLNHSNIVKLKEL 68
+LG G +G V++ + VA+K LK+ E+ L +E ++++ H N+V+L +
Sbjct: 25 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFL--KEAAVMKEIKHPNLVQLLGV 82
Query: 69 IQNNNRLYLVFECMEC-NLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQNGFFHRDL 127
Y++ E M NL + +R+ + + Q+ + Y+ + F HRDL
Sbjct: 83 CTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDL 142
Query: 128 KPENLLVSQG-IIKIADFGLAREIKSGPPYTNYVGSRW---YRAPEILLQSELYSSKADM 183
N LV + ++K+ADFGL+R + +G YT + G+++ + APE L ++ +S K+D+
Sbjct: 143 AARNCLVGENHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAPESLAYNK-FSIKSDV 200
Query: 184 WAMGAIMAELFTF-CPLFPGASEADQMYKICGVLGSPTMDSWADGLRQARAIKYQFPQLP 242
WA G ++ E+ T+ +PG + Q+Y++ + + + P+
Sbjct: 201 WAFGVLLWEIATYGMSPYPGI-DLSQVYELL-----------------EKDYRMERPE-- 240
Query: 243 RANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFFKRCF 288
+ L + W+PS RP+ AE H F+ F
Sbjct: 241 ---------GCPEKVYELMRACWQWNPSDRPSFAEI--HQAFETMF 275
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 66/195 (33%), Positives = 98/195 (50%), Gaps = 12/195 (6%)
Query: 2 DKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLNLREVKCLRKLNHSN 61
D+Y K++G G FG D+ + E VA+K +++ E+ RE+ R L H N
Sbjct: 19 DRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVK--REIINHRSLRHPN 76
Query: 62 IVKLKELIQNNNRLYLVFECMEC-NLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQN 120
IV+ KE+I L +V E L++ + R FSE E + + Q+ G+SY H
Sbjct: 77 IVRFKEVILTPTHLAIVMEYASGGELFERICNAGR--FSEDEARFFFQQLISGVSYCHAM 134
Query: 121 GFFHRDLKPENLLVSQGI---IKIADFGLARE--IKSGPPYTNYVGSRWYRAPEILLQSE 175
HRDLK EN L+ +KI FG ++ + S P T VG+ Y APE+LL+ E
Sbjct: 135 QVCHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQPKDT--VGTPAYIAPEVLLKKE 192
Query: 176 LYSSKADMWAMGAIM 190
AD+W+ G +
Sbjct: 193 YDGKVADVWSCGVTL 207
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 84/310 (27%), Positives = 141/310 (45%), Gaps = 68/310 (21%)
Query: 5 SGFKE---LGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLNLREVKCLRKLNHS- 60
S F+E LG+GAFG+V +A + AIK++ R+ + L EV L LNH
Sbjct: 6 SDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKI--RHTEEKLSTILSEVMLLASLNHQY 63
Query: 61 ------------NIVKLKELIQNNNRLYLVFE-CMECNLYQLMAARDRKLFSEPEIKAW- 106
N VK ++ + L++ E C LY L+ + + ++ + W
Sbjct: 64 VVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSEN---LNQQRDEYWR 120
Query: 107 LF-QVFQGLSYMHQNGFFHRDLKPENLLVSQGI-IKIADFGLAREIK------------- 151
LF Q+ + LSY+H G HRDLKP N+ + + +KI DFGLA+ +
Sbjct: 121 LFRQILEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNL 180
Query: 152 --SGPPYTNYVGSRWYRAPEILLQSELYSSKADMWAMGAIMAELFTFCPLFPGASEADQM 209
S T+ +G+ Y A E+L + Y+ K DM+++G I E+ ++P ++ +++
Sbjct: 181 PGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEM-----IYPFSTGMERV 235
Query: 210 YKICGVLGSPTMDSWADGLRQARAIKYQFPQLPRANLSALMPSASQDAISLFESLCSWDP 269
+ L++ R++ +FP P + + + + I L L DP
Sbjct: 236 ----------------NILKKLRSVSIEFP--PDFDDNKM--KVEKKIIRL---LIDHDP 272
Query: 270 SKRPTAAEAL 279
+KRP A L
Sbjct: 273 NKRPGARTLL 282
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 69/193 (35%), Positives = 103/193 (53%), Gaps = 17/193 (8%)
Query: 10 LGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLNLREVKCLRKLNHSNIVKLKELI 69
+GRGAFG V +A + + VAIK+++ + LR+ L ++NH NIVKL
Sbjct: 16 VGRGAFGVVCKA--KWRAKDVAIKQIESESERKAFIVELRQ---LSRVNHPNIVKLYGAC 70
Query: 70 QNNNRLYLVFECMEC-NLYQLM-AARDRKLFSEPEIKAWLFQVFQGLSYMHQ---NGFFH 124
N + LV E E +LY ++ A ++ +W Q QG++Y+H H
Sbjct: 71 LNP--VCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIH 128
Query: 125 RDLKPENLLVSQG--IIKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQSELYSSKAD 182
RDLKP NLL+ G ++KI DFG A +I++ TN GS + APE+ S YS K D
Sbjct: 129 RDLKPPNLLLVAGGTVLKICDFGTACDIQTH--MTNNKGSAAWMAPEVFEGSN-YSEKCD 185
Query: 183 MWAMGAIMAELFT 195
+++ G I+ E+ T
Sbjct: 186 VFSWGIILWEVIT 198
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 72/233 (30%), Positives = 106/233 (45%), Gaps = 42/233 (18%)
Query: 1 MDKYSG--FKEL---GRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLNLREVKCLR 55
+DK G FKE+ G G FG+VF+A G+ I+ +K E REVK L
Sbjct: 6 VDKRFGMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIRRVKYNNEKAE-----REVKALA 60
Query: 56 KLNHSNIVKLK------------------------ELIQNNNR-----LYLVFE-CMECN 85
KL+H NIV E +N++R L++ E C +
Sbjct: 61 KLDHVNIVHYNGCWDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGT 120
Query: 86 LYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQNGFFHRDLKPENL-LVSQGIIKIADF 144
L Q + R + + Q+ +G+ Y+H HRDLKP N+ LV +KI DF
Sbjct: 121 LEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSKKLIHRDLKPSNIFLVDTKQVKIGDF 180
Query: 145 GLAREIKSGPPYTNYVGSRWYRAPEILLQSELYSSKADMWAMGAIMAELFTFC 197
GL +K+ T G+ Y +PE + S+ Y + D++A+G I+AEL C
Sbjct: 181 GLVTSLKNDGKRTRSKGTLRYMSPE-QISSQDYGKEVDLYALGLILAELLHVC 232
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 66/211 (31%), Positives = 104/211 (49%), Gaps = 32/211 (15%)
Query: 7 FKELGRGAFGRV----FQAFDEHTGEAVAIKELK-----QRYASWEDCLNLREVKCLRKL 57
++LG G FG+V + ++ TGE VA+K LK Q + W+ RE++ LR L
Sbjct: 14 IRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQ-----REIEILRTL 68
Query: 58 NHSNIVKLKELI--QNNNRLYLVFECMECNLYQLMAARD---RKLFSEPEIKAWLFQVFQ 112
H +IVK K Q + LV E + L + RD R ++ + Q+ +
Sbjct: 69 YHEHIVKYKGCCEDQGEKSVQLVMEYVP-----LGSLRDYLPRHCVGLAQLLLFAQQICE 123
Query: 113 GLSYMHQNGFFHRDLKPENLLVSQG-IIKIADFGLAREIKSGPPYTNYVGSR-----WYR 166
G++Y+H + HR L N+L+ ++KI DFGLA+ + G Y WY
Sbjct: 124 GMAYLHAQHYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWY- 182
Query: 167 APEILLQSELYSSKADMWAMGAIMAELFTFC 197
APE L + + Y + +D+W+ G + EL T+C
Sbjct: 183 APECLKECKFYYA-SDVWSFGVTLYELLTYC 212
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 88.6 bits (218), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 64/197 (32%), Positives = 107/197 (54%), Gaps = 15/197 (7%)
Query: 7 FKELGRGAFGRVFQAFDEHTGE-AVAIKELKQRYASWEDCLNLREVKCLRKLNHSNIVKL 65
KELG G FG V + + G+ VAIK +K+ S ++ + E K + L+H +V+L
Sbjct: 29 LKELGTGQFGVV--KYGKWRGQYDVAIKMIKEGSMSEDEFIE--EAKVMMNLSHEKLVQL 84
Query: 66 KELIQNNNRLYLVFECME--CNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQNGFF 123
+ ++++ E M C L L R R F ++ V + + Y+ F
Sbjct: 85 YGVCTKQRPIFIITEYMANGCLLNYLREMRHR--FQTQQLLEMCKDVCEAMEYLESKQFL 142
Query: 124 HRDLKPENLLVS-QGIIKIADFGLAREIKSGPPYTNYVGSRW---YRAPEILLQSELYSS 179
HRDL N LV+ QG++K++DFGL+R + T+ VGS++ + PE+L+ S+ +SS
Sbjct: 143 HRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEE-TSSVGSKFPVRWSPPEVLMYSK-FSS 200
Query: 180 KADMWAMGAIMAELFTF 196
K+D+WA G +M E+++
Sbjct: 201 KSDIWAFGVLMWEIYSL 217
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 88.6 bits (218), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 84/310 (27%), Positives = 141/310 (45%), Gaps = 68/310 (21%)
Query: 5 SGFKE---LGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLNLREVKCLRKLNHS- 60
S F+E LG+GAFG+V +A + AIK++ R+ + L EV L LNH
Sbjct: 6 SDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKI--RHTEEKLSTILSEVMLLASLNHQY 63
Query: 61 ------------NIVKLKELIQNNNRLYLVFE-CMECNLYQLMAARDRKLFSEPEIKAW- 106
N VK ++ + L++ E C LY L+ + + ++ + W
Sbjct: 64 VVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSEN---LNQQRDEYWR 120
Query: 107 LF-QVFQGLSYMHQNGFFHRDLKPENLLVSQGI-IKIADFGLAREIK------------- 151
LF Q+ + LSY+H G HRDLKP N+ + + +KI DFGLA+ +
Sbjct: 121 LFRQILEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNL 180
Query: 152 --SGPPYTNYVGSRWYRAPEILLQSELYSSKADMWAMGAIMAELFTFCPLFPGASEADQM 209
S T+ +G+ Y A E+L + Y+ K DM+++G I E+ ++P ++ +++
Sbjct: 181 PGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEM-----IYPFSTGMERV 235
Query: 210 YKICGVLGSPTMDSWADGLRQARAIKYQFPQLPRANLSALMPSASQDAISLFESLCSWDP 269
+ L++ R++ +FP P + + + + I L L DP
Sbjct: 236 ----------------NILKKLRSVSIEFP--PDFDDNKM--KVEKKIIRL---LIDHDP 272
Query: 270 SKRPTAAEAL 279
+KRP A L
Sbjct: 273 NKRPGARTLL 282
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 88.6 bits (218), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 66/211 (31%), Positives = 104/211 (49%), Gaps = 32/211 (15%)
Query: 7 FKELGRGAFGRV----FQAFDEHTGEAVAIKELK-----QRYASWEDCLNLREVKCLRKL 57
++LG G FG+V + ++ TGE VA+K LK Q + W+ RE++ LR L
Sbjct: 13 IRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQ-----REIEILRTL 67
Query: 58 NHSNIVKLKELI--QNNNRLYLVFECMECNLYQLMAARD---RKLFSEPEIKAWLFQVFQ 112
H +IVK K Q + LV E + L + RD R ++ + Q+ +
Sbjct: 68 YHEHIVKYKGCCEDQGEKSVQLVMEYVP-----LGSLRDYLPRHCVGLAQLLLFAQQICE 122
Query: 113 GLSYMHQNGFFHRDLKPENLLVSQG-IIKIADFGLAREIKSGPPYTNYVGSR-----WYR 166
G++Y+H + HR L N+L+ ++KI DFGLA+ + G Y WY
Sbjct: 123 GMAYLHAQHYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWY- 181
Query: 167 APEILLQSELYSSKADMWAMGAIMAELFTFC 197
APE L + + Y + +D+W+ G + EL T+C
Sbjct: 182 APECLKECKFYYA-SDVWSFGVTLYELLTYC 211
>pdb|3KGA|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Potent 3-Aminopyrazole Atp Site Inhibitor
pdb|3M2W|A Chain A, Crystal Structure Of Mapkak Kinase 2 (Mk2) Complexed With
A Spiroazetidine-Tetracyclic Atp Site Inhibitor
pdb|3M42|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Tetracyclic Atp Site Inhibitor
Length = 299
Score = 88.2 bits (217), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 77/292 (26%), Positives = 125/292 (42%), Gaps = 60/292 (20%)
Query: 10 LGRGAFGRVFQAFDEHTGEAVAIKELKQ-RYASWEDCLNLREVKCLRKLNHSNIVKLKEL 68
LG G G+V Q F++ T E A+K L+ A E L+ R +C +IV++ ++
Sbjct: 26 LGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQC------PHIVRIVDV 79
Query: 69 IQN----NNRLYLVFECMEC-NLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQNGFF 123
+N L +V EC++ L+ + R + F+E E + + + + Y+H
Sbjct: 80 YENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIA 139
Query: 124 HRDLKPENLLVS----QGIIKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQSELYSS 179
HRD+KPENLL + I+K+ DFG A+E E Y
Sbjct: 140 HRDVKPENLLYTSKRPNAILKLTDFGFAKET----------------------TGEKYDK 177
Query: 180 KADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQARAIKYQFP 239
DMW++G IM L P F Y G+ SP M + + R +Y+FP
Sbjct: 178 SCDMWSLGVIMYILLCGYPPF---------YSNHGLAISPGMKT------RIRMGQYEFP 222
Query: 240 QLPRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFFKRCFYAP 291
+ + S++ L +L +P++R T E + HP+ + P
Sbjct: 223 NPEWSEV-------SEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVP 267
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 88.2 bits (217), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 74/286 (25%), Positives = 136/286 (47%), Gaps = 41/286 (14%)
Query: 9 ELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLNLREVKCLRKLNHSNIVKLKEL 68
+LG G +G V++ + VA+K LK+ E+ L +E ++++ H N+V+L +
Sbjct: 22 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFL--KEAAVMKEIKHPNLVQLLGV 79
Query: 69 IQNNNRLYLVFECMEC-NLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQNGFFHRDL 127
Y++ E M NL + +R+ + + Q+ + Y+ + F HRDL
Sbjct: 80 CTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDL 139
Query: 128 KPENLLVSQG-IIKIADFGLAREIKSGPPYTNYVGSRW---YRAPEILLQSELYSSKADM 183
N LV + ++K+ADFGL+R + +G YT + G+++ + APE L ++ +S K+D+
Sbjct: 140 AARNCLVGENHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAPESLAYNK-FSIKSDV 197
Query: 184 WAMGAIMAELFTF-CPLFPGASEADQMYKICGVLGSPTMDSWADGLRQARAIKYQFPQLP 242
WA G ++ E+ T+ +PG + Q+Y++ + + + P+
Sbjct: 198 WAFGVLLWEIATYGMSPYPGI-DLSQVYELL-----------------EKDYRMERPEGC 239
Query: 243 RANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFFKRCF 288
+ LM + Q W+PS RP+ AE H F+ F
Sbjct: 240 PEKVYELMRACWQ-----------WNPSDRPSFAEI--HQAFETMF 272
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 88.2 bits (217), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 72/286 (25%), Positives = 134/286 (46%), Gaps = 41/286 (14%)
Query: 9 ELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLNLREVKCLRKLNHSNIVKLKEL 68
+LG G +G V++ + VA+K LK+ E+ L +E ++++ H N+V+L +
Sbjct: 25 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFL--KEAAVMKEIKHPNLVQLLGV 82
Query: 69 IQNNNRLYLVFECMEC-NLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQNGFFHRDL 127
Y++ E M NL + +R+ + + Q+ + Y+ + F HRDL
Sbjct: 83 CTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDL 142
Query: 128 KPENLLVSQG-IIKIADFGLAREIKSGPPYTNYVGSRW---YRAPEILLQSELYSSKADM 183
N LV + ++K+ADFGL+R + +G YT + G+++ + APE L ++ +S K+D+
Sbjct: 143 AARNCLVGENHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAPESLAYNK-FSIKSDV 200
Query: 184 WAMGAIMAELFTF-CPLFPGASEADQMYKICGVLGSPTMDSWADGLRQARAIKYQFPQLP 242
WA G ++ E+ T+ +PG + Q+Y++ + + + P+
Sbjct: 201 WAFGVLLWEIATYGMSPYPGI-DLSQVYELL-----------------EKDYRMERPE-- 240
Query: 243 RANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFFKRCF 288
+ L + W+PS RP+ AE H F+ F
Sbjct: 241 ---------GCPEKVYELMRACWQWNPSDRPSFAEI--HQAFETMF 275
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 88.2 bits (217), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 74/286 (25%), Positives = 136/286 (47%), Gaps = 41/286 (14%)
Query: 9 ELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLNLREVKCLRKLNHSNIVKLKEL 68
+LG G +G V++ + VA+K LK+ E+ L +E ++++ H N+V+L +
Sbjct: 25 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFL--KEAAVMKEIKHPNLVQLLGV 82
Query: 69 IQNNNRLYLVFECMEC-NLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQNGFFHRDL 127
Y++ E M NL + +R+ + + Q+ + Y+ + F HRDL
Sbjct: 83 CTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDL 142
Query: 128 KPENLLVSQG-IIKIADFGLAREIKSGPPYTNYVGSRW---YRAPEILLQSELYSSKADM 183
N LV + ++K+ADFGL+R + +G YT + G+++ + APE L ++ +S K+D+
Sbjct: 143 AARNCLVGENHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAPESLAYNK-FSIKSDV 200
Query: 184 WAMGAIMAELFTF-CPLFPGASEADQMYKICGVLGSPTMDSWADGLRQARAIKYQFPQLP 242
WA G ++ E+ T+ +PG + Q+Y++ + + + P+
Sbjct: 201 WAFGVLLWEIATYGMSPYPGI-DLSQVYELL-----------------EKDYRMERPEGC 242
Query: 243 RANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFFKRCF 288
+ LM + Q W+PS RP+ AE H F+ F
Sbjct: 243 PEKVYELMRACWQ-----------WNPSDRPSFAEI--HQAFETMF 275
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 88.2 bits (217), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 72/286 (25%), Positives = 134/286 (46%), Gaps = 41/286 (14%)
Query: 9 ELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLNLREVKCLRKLNHSNIVKLKEL 68
+LG G +G V++ + VA+K LK+ E+ L +E ++++ H N+V+L +
Sbjct: 24 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFL--KEAAVMKEIKHPNLVQLLGV 81
Query: 69 IQNNNRLYLVFECMEC-NLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQNGFFHRDL 127
Y++ E M NL + +R+ + + Q+ + Y+ + F HRDL
Sbjct: 82 CTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDL 141
Query: 128 KPENLLVSQG-IIKIADFGLAREIKSGPPYTNYVGSRW---YRAPEILLQSELYSSKADM 183
N LV + ++K+ADFGL+R + +G YT + G+++ + APE L ++ +S K+D+
Sbjct: 142 AARNCLVGENHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAPESLAYNK-FSIKSDV 199
Query: 184 WAMGAIMAELFTF-CPLFPGASEADQMYKICGVLGSPTMDSWADGLRQARAIKYQFPQLP 242
WA G ++ E+ T+ +PG + Q+Y++ + + + P+
Sbjct: 200 WAFGVLLWEIATYGMSPYPGI-DLSQVYELL-----------------EKDYRMERPE-- 239
Query: 243 RANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFFKRCF 288
+ L + W+PS RP+ AE H F+ F
Sbjct: 240 ---------GCPEKVYELMRACWQWNPSDRPSFAEI--HQAFETMF 274
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 74/286 (25%), Positives = 136/286 (47%), Gaps = 41/286 (14%)
Query: 9 ELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLNLREVKCLRKLNHSNIVKLKEL 68
+LG G +G V++ + VA+K LK+ E+ L +E ++++ H N+V+L +
Sbjct: 22 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFL--KEAAVMKEIKHPNLVQLLGV 79
Query: 69 IQNNNRLYLVFECMEC-NLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQNGFFHRDL 127
Y++ E M NL + +R+ + + Q+ + Y+ + F HRDL
Sbjct: 80 CTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDL 139
Query: 128 KPENLLVSQG-IIKIADFGLAREIKSGPPYTNYVGSRW---YRAPEILLQSELYSSKADM 183
N LV + ++K+ADFGL+R + +G YT + G+++ + APE L ++ +S K+D+
Sbjct: 140 AARNCLVGENHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAPESLAYNK-FSIKSDV 197
Query: 184 WAMGAIMAELFTF-CPLFPGASEADQMYKICGVLGSPTMDSWADGLRQARAIKYQFPQLP 242
WA G ++ E+ T+ +PG + Q+Y++ + + + P+
Sbjct: 198 WAFGVLLWEIATYGMSPYPGI-DLSQVYELL-----------------EKDYRMERPEGC 239
Query: 243 RANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFFKRCF 288
+ LM + Q W+PS RP+ AE H F+ F
Sbjct: 240 PEKVYELMRACWQ-----------WNPSDRPSFAEI--HQAFETMF 272
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 72/286 (25%), Positives = 134/286 (46%), Gaps = 41/286 (14%)
Query: 9 ELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLNLREVKCLRKLNHSNIVKLKEL 68
+LG G +G V++ + VA+K LK+ E+ L +E ++++ H N+V+L +
Sbjct: 227 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFL--KEAAVMKEIKHPNLVQLLGV 284
Query: 69 IQNNNRLYLVFECME-CNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQNGFFHRDL 127
Y++ E M NL + +R+ S + Q+ + Y+ + F HR+L
Sbjct: 285 CTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRNL 344
Query: 128 KPENLLVSQG-IIKIADFGLAREIKSGPPYTNYVGSRW---YRAPEILLQSELYSSKADM 183
N LV + ++K+ADFGL+R + +G YT + G+++ + APE L ++ +S K+D+
Sbjct: 345 AARNCLVGENHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAPESLAYNK-FSIKSDV 402
Query: 184 WAMGAIMAELFTF-CPLFPGASEADQMYKICGVLGSPTMDSWADGLRQARAIKYQFPQLP 242
WA G ++ E+ T+ +PG + Q+Y++ + + + P+
Sbjct: 403 WAFGVLLWEIATYGMSPYPGI-DLSQVYELL-----------------EKDYRMERPE-- 442
Query: 243 RANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFFKRCF 288
+ L + W+PS RP+ AE H F+ F
Sbjct: 443 ---------GCPEKVYELMRACWQWNPSDRPSFAEI--HQAFETMF 477
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 88.2 bits (217), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 74/286 (25%), Positives = 136/286 (47%), Gaps = 41/286 (14%)
Query: 9 ELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLNLREVKCLRKLNHSNIVKLKEL 68
+LG G +G V++ + VA+K LK+ E+ L +E ++++ H N+V+L +
Sbjct: 33 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFL--KEAAVMKEIKHPNLVQLLGV 90
Query: 69 IQNNNRLYLVFECMEC-NLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQNGFFHRDL 127
Y++ E M NL + +R+ + + Q+ + Y+ + F HRDL
Sbjct: 91 CTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDL 150
Query: 128 KPENLLVSQG-IIKIADFGLAREIKSGPPYTNYVGSRW---YRAPEILLQSELYSSKADM 183
N LV + ++K+ADFGL+R + +G YT + G+++ + APE L ++ +S K+D+
Sbjct: 151 AARNCLVGENHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAPESLAYNK-FSIKSDV 208
Query: 184 WAMGAIMAELFTF-CPLFPGASEADQMYKICGVLGSPTMDSWADGLRQARAIKYQFPQLP 242
WA G ++ E+ T+ +PG + Q+Y++ + + + P+
Sbjct: 209 WAFGVLLWEIATYGMSPYPGI-DLSQVYELL-----------------EKDYRMERPEGC 250
Query: 243 RANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFFKRCF 288
+ LM + Q W+PS RP+ AE H F+ F
Sbjct: 251 PEKVYELMRACWQ-----------WNPSDRPSFAEI--HQAFETMF 283
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 88.2 bits (217), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 64/197 (32%), Positives = 107/197 (54%), Gaps = 15/197 (7%)
Query: 7 FKELGRGAFGRVFQAFDEHTGE-AVAIKELKQRYASWEDCLNLREVKCLRKLNHSNIVKL 65
KELG G FG V + + G+ VAIK +K+ S ++ + E K + L+H +V+L
Sbjct: 14 LKELGTGQFGVV--KYGKWRGQYDVAIKMIKEGSMSEDEFIE--EAKVMMNLSHEKLVQL 69
Query: 66 KELIQNNNRLYLVFECME--CNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQNGFF 123
+ ++++ E M C L L R R F ++ V + + Y+ F
Sbjct: 70 YGVCTKQRPIFIITEYMANGCLLNYLREMRHR--FQTQQLLEMCKDVCEAMEYLESKQFL 127
Query: 124 HRDLKPENLLVS-QGIIKIADFGLAREIKSGPPYTNYVGSRW---YRAPEILLQSELYSS 179
HRDL N LV+ QG++K++DFGL+R + YT+ GS++ + PE+L+ S+ +SS
Sbjct: 128 HRDLAARNCLVNDQGVVKVSDFGLSRYVLD-DEYTSSRGSKFPVRWSPPEVLMYSK-FSS 185
Query: 180 KADMWAMGAIMAELFTF 196
K+D+WA G +M E+++
Sbjct: 186 KSDIWAFGVLMWEIYSL 202
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 87.8 bits (216), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 74/286 (25%), Positives = 136/286 (47%), Gaps = 41/286 (14%)
Query: 9 ELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLNLREVKCLRKLNHSNIVKLKEL 68
+LG G +G V++ + VA+K LK+ E+ L +E ++++ H N+V+L +
Sbjct: 18 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFL--KEAAVMKEIKHPNLVQLLGV 75
Query: 69 IQNNNRLYLVFECMEC-NLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQNGFFHRDL 127
Y++ E M NL + +R+ S + Q+ + Y+ + F HRDL
Sbjct: 76 CTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDL 135
Query: 128 KPENLLVSQG-IIKIADFGLAREIKSGPPYTNYVGSRW---YRAPEILLQSELYSSKADM 183
N LV + ++K+ADFGL+R + +G +T + G+++ + APE L ++ +S K+D+
Sbjct: 136 AARNCLVGENHLVKVADFGLSR-LMTGDTFTAHAGAKFPIKWTAPESLAYNK-FSIKSDV 193
Query: 184 WAMGAIMAELFTF-CPLFPGASEADQMYKICGVLGSPTMDSWADGLRQARAIKYQFPQLP 242
WA G ++ E+ T+ +PG + Q+Y++ + + + P+
Sbjct: 194 WAFGVLLWEIATYGMSPYPGI-DPSQVYELL-----------------EKDYRMERPEGC 235
Query: 243 RANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFFKRCF 288
+ LM + Q W+PS RP+ AE H F+ F
Sbjct: 236 PEKVYELMRACWQ-----------WNPSDRPSFAEI--HQAFETMF 268
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 74/286 (25%), Positives = 136/286 (47%), Gaps = 41/286 (14%)
Query: 9 ELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLNLREVKCLRKLNHSNIVKLKEL 68
+LG G +G V++ + VA+K LK+ E+ L +E ++++ H N+V+L +
Sbjct: 20 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFL--KEAAVMKEIKHPNLVQLLGV 77
Query: 69 IQNNNRLYLVFECMEC-NLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQNGFFHRDL 127
Y++ E M NL + +R+ + + Q+ + Y+ + F HRDL
Sbjct: 78 CTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDL 137
Query: 128 KPENLLVSQG-IIKIADFGLAREIKSGPPYTNYVGSRW---YRAPEILLQSELYSSKADM 183
N LV + ++K+ADFGL+R + +G YT + G+++ + APE L ++ +S K+D+
Sbjct: 138 AARNCLVGENHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAPESLAYNK-FSIKSDV 195
Query: 184 WAMGAIMAELFTF-CPLFPGASEADQMYKICGVLGSPTMDSWADGLRQARAIKYQFPQLP 242
WA G ++ E+ T+ +PG + Q+Y++ + + + P+
Sbjct: 196 WAFGVLLWEIATYGMSPYPGI-DLSQVYELL-----------------EKDYRMERPEGC 237
Query: 243 RANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFFKRCF 288
+ LM + Q W+PS RP+ AE H F+ F
Sbjct: 238 PEKVYELMRACWQ-----------WNPSDRPSFAEI--HQAFETMF 270
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/220 (31%), Positives = 105/220 (47%), Gaps = 29/220 (13%)
Query: 1 MDKYSG--FKEL---GRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLNLREVKCLR 55
+DK G FKE+ G G FG+VF+A G+ IK +K E REVK L
Sbjct: 5 VDKRFGMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNNEKAE-----REVKALA 59
Query: 56 KLNHSNIVKL-----------KELIQNNNR-----LYLVFE-CMECNLYQLMAARDRKLF 98
KL+H NIV + +N++R L++ E C + L Q + R +
Sbjct: 60 KLDHVNIVHYNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKL 119
Query: 99 SEPEIKAWLFQVFQGLSYMHQNGFFHRDLKPENL-LVSQGIIKIADFGLAREIKSGPPYT 157
+ Q+ +G+ Y+H +RDLKP N+ LV +KI DFGL +K+
Sbjct: 120 DKVLALELFEQITKGVDYIHSKKLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKRX 179
Query: 158 NYVGSRWYRAPEILLQSELYSSKADMWAMGAIMAELFTFC 197
G+ Y +PE + S+ Y + D++A+G I+AEL C
Sbjct: 180 RSKGTLRYMSPE-QISSQDYGKEVDLYALGLILAELLHVC 218
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 72/286 (25%), Positives = 134/286 (46%), Gaps = 41/286 (14%)
Query: 9 ELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLNLREVKCLRKLNHSNIVKLKEL 68
+LG G +G V++ + VA+K LK+ E+ L +E ++++ H N+V+L +
Sbjct: 20 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFL--KEAAVMKEIKHPNLVQLLGV 77
Query: 69 IQNNNRLYLVFECMEC-NLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQNGFFHRDL 127
Y++ E M NL + +R+ + + Q+ + Y+ + F HRDL
Sbjct: 78 CTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDL 137
Query: 128 KPENLLVSQG-IIKIADFGLAREIKSGPPYTNYVGSRW---YRAPEILLQSELYSSKADM 183
N LV + ++K+ADFGL+R + +G YT + G+++ + APE L ++ +S K+D+
Sbjct: 138 AARNCLVGENHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAPESLAYNK-FSIKSDV 195
Query: 184 WAMGAIMAELFTF-CPLFPGASEADQMYKICGVLGSPTMDSWADGLRQARAIKYQFPQLP 242
WA G ++ E+ T+ +PG + Q+Y++ + + + P+
Sbjct: 196 WAFGVLLWEIATYGMSPYPGI-DLSQVYELL-----------------EKDYRMERPE-- 235
Query: 243 RANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFFKRCF 288
+ L + W+PS RP+ AE H F+ F
Sbjct: 236 ---------GCPEKVYELMRACWQWNPSDRPSFAEI--HQAFETMF 270
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 76/272 (27%), Positives = 124/272 (45%), Gaps = 33/272 (12%)
Query: 8 KELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLNLREVKCLRKL-NHSNIVKLK 66
K LG G+F + + + +A A+K + +R + +E+ L+ H NIVKL
Sbjct: 17 KPLGEGSFSICRKCVHKKSNQAFAVKIISKRMEANTQ----KEITALKLCEGHPNIVKLH 72
Query: 67 ELIQNNNRLYLVFECMECN-LYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQNGFFHR 125
E+ + +LV E + L++ + + +K FSE E + ++ +S+MH G HR
Sbjct: 73 EVFHDQLHTFLVMELLNGGELFERI--KKKKHFSETEASYIMRKLVSAVSHMHDVGVVHR 130
Query: 126 DLKPENLLVSQGI----IKIADFGLAR-EIKSGPPYTNYVGSRWYRAPEILLQSELYSSK 180
DLKPENLL + IKI DFG AR + P + Y APE+L Q+ Y
Sbjct: 131 DLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTPCFTLHYAAPELLNQNG-YDES 189
Query: 181 ADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQARAIKYQFPQ 240
D+W++G I+ + + F S T S + +++ + + F
Sbjct: 190 CDLWSLGVILYTMLSGQVPFQSHDR------------SLTCTSAVEIMKKIKKGDFSFEG 237
Query: 241 LPRANLSALMPSASQDAISLFESLCSWDPSKR 272
N+ SQ+A L + L + DP+KR
Sbjct: 238 EAWKNV-------SQEAKDLIQGLLTVDPNKR 262
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 75/286 (26%), Positives = 135/286 (47%), Gaps = 41/286 (14%)
Query: 9 ELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLNLREVKCLRKLNHSNIVKLKEL 68
+LG G FG V++ + VA+K LK+ E+ L +E ++++ H N+V+L +
Sbjct: 18 KLGGGQFGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFL--KEAAVMKEIKHPNLVQLLGV 75
Query: 69 IQNNNRLYLVFECMEC-NLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQNGFFHRDL 127
Y++ E M NL + +R+ S + Q+ + Y+ + F HRDL
Sbjct: 76 CTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDL 135
Query: 128 KPENLLVSQG-IIKIADFGLAREIKSGPPYTNYVGSRW---YRAPEILLQSELYSSKADM 183
N LV + ++K+ADFGL+R + +G T + G+++ + APE L ++ +S K+D+
Sbjct: 136 AARNCLVGENHLVKVADFGLSR-LMTGDTXTAHAGAKFPIKWTAPESLAYNK-FSIKSDV 193
Query: 184 WAMGAIMAELFTF-CPLFPGASEADQMYKICGVLGSPTMDSWADGLRQARAIKYQFPQLP 242
WA G ++ E+ T+ +PG + Q+Y++ + + + P+
Sbjct: 194 WAFGVLLWEIATYGMSPYPGI-DPSQVYELL-----------------EKDYRMERPEGC 235
Query: 243 RANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFFKRCF 288
+ LM + Q W+PS RP+ AE H F+ F
Sbjct: 236 PEKVYELMRACWQ-----------WNPSDRPSFAEI--HQAFETMF 268
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 104/193 (53%), Gaps = 11/193 (5%)
Query: 7 FKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLNLREVKCLRKLNHSNIVKL- 65
+ +G+G FG V ++ G VA+K +K + L E + +L HSN+V+L
Sbjct: 17 LQTIGKGEFGDVM--LGDYRGNKVAVKCIKNDATAQA---FLAEASVMTQLRHSNLVQLL 71
Query: 66 KELIQNNNRLYLVFECM-ECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQNGFFH 124
+++ LY+V E M + +L + +R R + + + V + + Y+ N F H
Sbjct: 72 GVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVH 131
Query: 125 RDLKPENLLVSQ-GIIKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQSELYSSKADM 183
RDL N+LVS+ + K++DFGL +E S T + +W APE L ++ +S+K+D+
Sbjct: 132 RDLAARNVLVSEDNVAKVSDFGLTKEASSTQD-TGKLPVKW-TAPEALREAA-FSTKSDV 188
Query: 184 WAMGAIMAELFTF 196
W+ G ++ E+++F
Sbjct: 189 WSFGILLWEIYSF 201
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 104/193 (53%), Gaps = 11/193 (5%)
Query: 7 FKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLNLREVKCLRKLNHSNIVKL- 65
+ +G+G FG V ++ G VA+K +K + L E + +L HSN+V+L
Sbjct: 26 LQTIGKGEFGDVM--LGDYRGNKVAVKCIKNDATAQA---FLAEASVMTQLRHSNLVQLL 80
Query: 66 KELIQNNNRLYLVFECM-ECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQNGFFH 124
+++ LY+V E M + +L + +R R + + + V + + Y+ N F H
Sbjct: 81 GVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVH 140
Query: 125 RDLKPENLLVSQ-GIIKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQSELYSSKADM 183
RDL N+LVS+ + K++DFGL +E S T + +W APE L + + +S+K+D+
Sbjct: 141 RDLAARNVLVSEDNVAKVSDFGLTKEASSTQD-TGKLPVKW-TAPEALREKK-FSTKSDV 197
Query: 184 WAMGAIMAELFTF 196
W+ G ++ E+++F
Sbjct: 198 WSFGILLWEIYSF 210
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 104/193 (53%), Gaps = 11/193 (5%)
Query: 7 FKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLNLREVKCLRKLNHSNIVKL- 65
+ +G+G FG V ++ G VA+K +K + L E + +L HSN+V+L
Sbjct: 198 LQTIGKGEFGDVM--LGDYRGNKVAVKCIKNDATAQA---FLAEASVMTQLRHSNLVQLL 252
Query: 66 KELIQNNNRLYLVFECM-ECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQNGFFH 124
+++ LY+V E M + +L + +R R + + + V + + Y+ N F H
Sbjct: 253 GVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVH 312
Query: 125 RDLKPENLLVSQ-GIIKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQSELYSSKADM 183
RDL N+LVS+ + K++DFGL +E S T + +W APE L + + +S+K+D+
Sbjct: 313 RDLAARNVLVSEDNVAKVSDFGLTKEASSTQD-TGKLPVKW-TAPEALREKK-FSTKSDV 369
Query: 184 WAMGAIMAELFTF 196
W+ G ++ E+++F
Sbjct: 370 WSFGILLWEIYSF 382
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 74/286 (25%), Positives = 135/286 (47%), Gaps = 41/286 (14%)
Query: 9 ELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLNLREVKCLRKLNHSNIVKLKEL 68
+LG G +G V++ + VA+K LK+ E+ L +E ++++ H N+V+L +
Sbjct: 18 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFL--KEAAVMKEIKHPNLVQLLGV 75
Query: 69 IQNNNRLYLVFECMEC-NLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQNGFFHRDL 127
Y++ E M NL + +R+ S + Q+ + Y+ + F HRDL
Sbjct: 76 CTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDL 135
Query: 128 KPENLLVSQG-IIKIADFGLAREIKSGPPYTNYVGSRW---YRAPEILLQSELYSSKADM 183
N LV + ++K+ADFGL+R + +G T + G+++ + APE L ++ +S K+D+
Sbjct: 136 AARNCLVGENHLVKVADFGLSR-LMTGDTXTAHAGAKFPIKWTAPESLAYNK-FSIKSDV 193
Query: 184 WAMGAIMAELFTF-CPLFPGASEADQMYKICGVLGSPTMDSWADGLRQARAIKYQFPQLP 242
WA G ++ E+ T+ +PG + Q+Y++ + + + P+
Sbjct: 194 WAFGVLLWEIATYGMSPYPGI-DPSQVYELL-----------------EKDYRMERPEGC 235
Query: 243 RANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFFKRCF 288
+ LM + Q W+PS RP+ AE H F+ F
Sbjct: 236 PEKVYELMRACWQ-----------WNPSDRPSFAEI--HQAFETMF 268
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 113/223 (50%), Gaps = 18/223 (8%)
Query: 7 FKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLNLREVKCLRKLNHSNIVKL- 65
+ +G+G FG V ++ G VA+K +K + L E + +L HSN+V+L
Sbjct: 11 LQTIGKGEFGDVM--LGDYRGNKVAVKCIKNDATAQA---FLAEASVMTQLRHSNLVQLL 65
Query: 66 KELIQNNNRLYLVFECM-ECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQNGFFH 124
+++ LY+V E M + +L + +R R + + + V + + Y+ N F H
Sbjct: 66 GVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVH 125
Query: 125 RDLKPENLLVSQ-GIIKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQSELYSSKADM 183
RDL N+LVS+ + K++DFGL +E S T + +W APE L + + +S+K+D+
Sbjct: 126 RDLAARNVLVSEDNVAKVSDFGLTKEASSTQD-TGKLPVKW-TAPEALREKK-FSTKSDV 182
Query: 184 WAMGAIMAELFTF-------CPLFPGASEADQMYKICGVLGSP 219
W+ G ++ E+++F PL ++ YK+ G P
Sbjct: 183 WSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMDAPDGCP 225
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/213 (32%), Positives = 103/213 (48%), Gaps = 29/213 (13%)
Query: 9 ELGRGAFGRVFQA-----FDEHTGEAVAIKELKQRYASWEDCLNLREVKCLRKLNHSNIV 63
ELG GAFG+VF A E VA+K LK+ S RE + L L H +IV
Sbjct: 48 ELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQ-REAELLTMLQHQHIV 106
Query: 64 KLKELIQNNNRLYLVFECM---ECNLYQLMAARDRKLFSEPE-----------IKAWLFQ 109
+ + L +VFE M + N + D KL + E + A Q
Sbjct: 107 RFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQ 166
Query: 110 VFQGLSYMHQNGFFHRDLKPENLLVSQG-IIKIADFGLAREIKSGPPYTNYVGSRW---- 164
V G+ Y+ F HRDL N LV QG ++KI DFG++R+I S Y VG R
Sbjct: 167 VAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYR--VGGRTMLPI 224
Query: 165 -YRAPEILLQSELYSSKADMWAMGAIMAELFTF 196
+ PE +L + +++++D+W+ G ++ E+FT+
Sbjct: 225 RWMPPESILYRK-FTTESDVWSFGVVLWEIFTY 256
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 108/231 (46%), Gaps = 22/231 (9%)
Query: 10 LGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLNLREVKCLRKLNHSNIVKL---K 66
LG+GA VF+ + TG+ AIK + +RE + L+KLNH NIVKL +
Sbjct: 17 LGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIE 76
Query: 67 ELIQNNNRLYLVFECMECNLYQLMAARDRKL-FSEPEIKAWLFQVFQGLSYMHQNGFFHR 125
E +++ ++ C +LY ++ E E L V G++++ +NG HR
Sbjct: 77 EETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIVHR 136
Query: 126 DLKPENLLV-----SQGIIKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQSEL---- 176
++KP N++ Q + K+ DFG ARE++ + + G+ Y P++ ++ L
Sbjct: 137 NIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVSLYGTEEYLHPDMYERAVLRKDH 196
Query: 177 ---YSSKADMWAMGAIMAELFT----FCPLFPGASEADQMYKICGVLGSPT 220
Y + D+W++G T F P + MYKI + G P+
Sbjct: 197 QKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKI--ITGKPS 245
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/275 (26%), Positives = 122/275 (44%), Gaps = 20/275 (7%)
Query: 1 MDKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLN--LREVKCLRKLN 58
+D + + LG+G FG V+ A ++ +A+K L + E + RE++ L
Sbjct: 13 IDDFDIVRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLR 72
Query: 59 HSNIVKLKELIQNNNRLYLVFE-CMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYM 117
H NI+++ + R+YL+ E LY+ + R F E ++ ++ L Y
Sbjct: 73 HPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGR--FDEQRSATFMEELADALHYC 130
Query: 118 HQNGFFHRDLKPENLLVS-QGIIKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQSEL 176
H+ HRD+KPENLL+ +G +KIADFG + S G+ Y PE +++ +
Sbjct: 131 HERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPSL-RRRXMCGTLDYLPPE-MIEGKT 188
Query: 177 YSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGV-LGSPTMDSWADGLRQARAIK 235
+ K D+W G + E P F S + +I V L P S ++ ++
Sbjct: 189 HDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKFPPFLSDGSKDLISKLLR 248
Query: 236 YQFPQ-LP----------RANLSALMPSASQDAIS 259
Y PQ LP +AN ++P Q S
Sbjct: 249 YHPPQRLPLKGVMEHPWVKANSRRVLPPVYQSTQS 283
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 84/306 (27%), Positives = 141/306 (46%), Gaps = 49/306 (16%)
Query: 1 MDKYSGFKELGRGAFGRVF---QAFDEHTGEAVAIKELK-----QRYASWEDCLNLREVK 52
++ + K LG GA+G+VF + TG+ A+K LK Q+ + E R+V
Sbjct: 53 IENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQV- 111
Query: 53 CLRKLNHSN-IVKLKELIQNNNRLYLVFECMECN-LYQLMAARDRKLFSEPEIKAWLFQV 110
L + S +V L Q +L+L+ + + L+ ++ R+R F+E E++ ++ ++
Sbjct: 112 -LEHIRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQRER--FTEHEVQIYVGEI 168
Query: 111 FQGLSYMHQNGFFHRDLKPENLLV-SQGIIKIADFGLAREIKSGPPYTNY--VGSRWYRA 167
L ++H+ G +RD+K EN+L+ S G + + DFGL++E + Y G+ Y A
Sbjct: 169 VLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAYDFCGTIEYMA 228
Query: 168 PEILLQSELYSSKA-DMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWAD 226
P+I+ + KA D W++G +M EL T F E + +I
Sbjct: 229 PDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEI-------------- 274
Query: 227 GLRQARAIKYQFPQLPRANLSALMPSASQDAISLFESLCSWDPSKR-----PTAAEALQH 281
+R I P P+ +SAL A L + L DP KR A E +H
Sbjct: 275 ----SRRILKSEPPYPQ-EMSAL-------AKDLIQRLLMKDPKKRLGCGPRDADEIKEH 322
Query: 282 PFFKRC 287
FF++
Sbjct: 323 LFFQKI 328
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/192 (32%), Positives = 105/192 (54%), Gaps = 11/192 (5%)
Query: 9 ELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLNLREVKCLRKLNHSNIVKLKEL 68
+LG+G FG V+ T VAIK LK S E L +E + ++KL H +V+L +
Sbjct: 274 KLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPEAFL--QEAQVMKKLRHEKLVQLYAV 330
Query: 69 IQNNNRLYLVFECM-ECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQNGFFHRDL 127
+ + +Y+V E M + +L + K P++ Q+ G++Y+ + + HRDL
Sbjct: 331 V-SEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDL 389
Query: 128 KPENLLVSQGII-KIADFGLAREIKSGPPYTNYVGSRW---YRAPEILLQSELYSSKADM 183
+ N+LV + ++ K+ADFGLAR I+ YT G+++ + APE L ++ K+D+
Sbjct: 390 RAANILVGENLVCKVADFGLARLIEDN-EYTARQGAKFPIKWTAPEAALYGR-FTIKSDV 447
Query: 184 WAMGAIMAELFT 195
W+ G ++ EL T
Sbjct: 448 WSFGILLTELTT 459
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 134/286 (46%), Gaps = 41/286 (14%)
Query: 9 ELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLNLREVKCLRKLNHSNIVKLKEL 68
+LG G +G V++ + VA+K LK+ E+ L +E ++++ H N+V+L +
Sbjct: 224 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFL--KEAAVMKEIKHPNLVQLLGV 281
Query: 69 IQNNNRLYLVFECME-CNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQNGFFHRDL 127
Y++ E M NL + +R+ + + Q+ + Y+ + F HR+L
Sbjct: 282 CTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRNL 341
Query: 128 KPENLLVSQG-IIKIADFGLAREIKSGPPYTNYVGSRW---YRAPEILLQSELYSSKADM 183
N LV + ++K+ADFGL+R + +G YT + G+++ + APE L ++ +S K+D+
Sbjct: 342 AARNCLVGENHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAPESLAYNK-FSIKSDV 399
Query: 184 WAMGAIMAELFTF-CPLFPGASEADQMYKICGVLGSPTMDSWADGLRQARAIKYQFPQLP 242
WA G ++ E+ T+ +PG + Q+Y++ + + + P+
Sbjct: 400 WAFGVLLWEIATYGMSPYPGI-DLSQVYELL-----------------EKDYRMERPE-- 439
Query: 243 RANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFFKRCF 288
+ L + W+PS RP+ AE H F+ F
Sbjct: 440 ---------GCPEKVYELMRACWQWNPSDRPSFAEI--HQAFETMF 474
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/213 (32%), Positives = 103/213 (48%), Gaps = 29/213 (13%)
Query: 9 ELGRGAFGRVFQA-----FDEHTGEAVAIKELKQRYASWEDCLNLREVKCLRKLNHSNIV 63
ELG GAFG+VF A E VA+K LK+ S RE + L L H +IV
Sbjct: 19 ELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQ-REAELLTMLQHQHIV 77
Query: 64 KLKELIQNNNRLYLVFECM---ECNLYQLMAARDRKLFSEPE-----------IKAWLFQ 109
+ + L +VFE M + N + D KL + E + A Q
Sbjct: 78 RFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQ 137
Query: 110 VFQGLSYMHQNGFFHRDLKPENLLVSQG-IIKIADFGLAREIKSGPPYTNYVGSRW---- 164
V G+ Y+ F HRDL N LV QG ++KI DFG++R+I S Y VG R
Sbjct: 138 VAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYR--VGGRTMLPI 195
Query: 165 -YRAPEILLQSELYSSKADMWAMGAIMAELFTF 196
+ PE +L + +++++D+W+ G ++ E+FT+
Sbjct: 196 RWMPPESILYRK-FTTESDVWSFGVVLWEIFTY 227
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/213 (32%), Positives = 103/213 (48%), Gaps = 29/213 (13%)
Query: 9 ELGRGAFGRVFQA-----FDEHTGEAVAIKELKQRYASWEDCLNLREVKCLRKLNHSNIV 63
ELG GAFG+VF A E VA+K LK+ S RE + L L H +IV
Sbjct: 25 ELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQ-REAELLTMLQHQHIV 83
Query: 64 KLKELIQNNNRLYLVFECM---ECNLYQLMAARDRKLFSEPE-----------IKAWLFQ 109
+ + L +VFE M + N + D KL + E + A Q
Sbjct: 84 RFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQ 143
Query: 110 VFQGLSYMHQNGFFHRDLKPENLLVSQG-IIKIADFGLAREIKSGPPYTNYVGSRW---- 164
V G+ Y+ F HRDL N LV QG ++KI DFG++R+I S Y VG R
Sbjct: 144 VAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYR--VGGRTMLPI 201
Query: 165 -YRAPEILLQSELYSSKADMWAMGAIMAELFTF 196
+ PE +L + +++++D+W+ G ++ E+FT+
Sbjct: 202 RWMPPESILYRK-FTTESDVWSFGVVLWEIFTY 233
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 107/231 (46%), Gaps = 22/231 (9%)
Query: 10 LGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLNLREVKCLRKLNHSNIVKL---K 66
LG+GA VF+ + TG+ AIK + +RE + L+KLNH NIVKL +
Sbjct: 17 LGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIE 76
Query: 67 ELIQNNNRLYLVFECMECNLYQLMAARDRKL-FSEPEIKAWLFQVFQGLSYMHQNGFFHR 125
E +++ ++ C +LY ++ E E L V G++++ +NG HR
Sbjct: 77 EETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIVHR 136
Query: 126 DLKPENLLV-----SQGIIKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQSEL---- 176
++KP N++ Q + K+ DFG ARE++ + G+ Y P++ ++ L
Sbjct: 137 NIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVXLYGTEEYLHPDMYERAVLRKDH 196
Query: 177 ---YSSKADMWAMGAIMAELFT----FCPLFPGASEADQMYKICGVLGSPT 220
Y + D+W++G T F P + MYKI + G P+
Sbjct: 197 QKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKI--ITGKPS 245
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/278 (24%), Positives = 131/278 (47%), Gaps = 39/278 (14%)
Query: 9 ELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLNLREVKCLRKLNHSNIVKLKEL 68
+LG G +G V++ + VA+K LK+ E+ L +E ++++ H N+V+L +
Sbjct: 266 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFL--KEAAVMKEIKHPNLVQLLGV 323
Query: 69 IQNNNRLYLVFECME-CNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQNGFFHRDL 127
Y++ E M NL + +R+ + + Q+ + Y+ + F HR+L
Sbjct: 324 CTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRNL 383
Query: 128 KPENLLVSQG-IIKIADFGLAREIKSGPPYTNYVGSRW---YRAPEILLQSELYSSKADM 183
N LV + ++K+ADFGL+R + +G YT + G+++ + APE L ++ +S K+D+
Sbjct: 384 AARNCLVGENHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAPESLAYNK-FSIKSDV 441
Query: 184 WAMGAIMAELFTF-CPLFPGASEADQMYKICGVLGSPTMDSWADGLRQARAIKYQFPQLP 242
WA G ++ E+ T+ +PG + Q+Y++ + + + P+
Sbjct: 442 WAFGVLLWEIATYGMSPYPGI-DLSQVYELL-----------------EKDYRMERPE-- 481
Query: 243 RANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQ 280
+ L + W+PS RP+ AE Q
Sbjct: 482 ---------GCPEKVYELMRACWQWNPSDRPSFAEIHQ 510
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 110/205 (53%), Gaps = 21/205 (10%)
Query: 7 FKELGRGAFGRV----FQAFDEHTGEAVAIKELKQRYASWEDCLNL-REVKCLRKLNHSN 61
++LG+G FG V + ++TGE VA+K+L+ +++ E + RE++ L+ L H N
Sbjct: 18 LRQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ--HSTEEHLRDFEREIEILKSLQHDN 75
Query: 62 IVKLKELIQNNNR--LYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQ 119
IVK K + + R L L+ E + + + ++ ++ + Q+ +G+ Y+
Sbjct: 76 IVKYKGVCYSAGRRNLKLIMEFLPYGSLREYLQKHKERIDHIKLLQYTSQICKGMEYLGT 135
Query: 120 NGFFHRDLKPENLLV-SQGIIKIADFGLAREI-------KSGPPYTNYVGSRWYRAPEIL 171
+ HRDL N+LV ++ +KI DFGL + + K P + + WY APE L
Sbjct: 136 KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIF--WY-APESL 192
Query: 172 LQSELYSSKADMWAMGAIMAELFTF 196
+S+ +S +D+W+ G ++ ELFT+
Sbjct: 193 TESK-FSVASDVWSFGVVLYELFTY 216
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 110/205 (53%), Gaps = 21/205 (10%)
Query: 7 FKELGRGAFGRV----FQAFDEHTGEAVAIKELKQRYASWEDCLNL-REVKCLRKLNHSN 61
++LG+G FG V + ++TGE VA+K+L+ +++ E + RE++ L+ L H N
Sbjct: 46 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ--HSTEEHLRDFEREIEILKSLQHDN 103
Query: 62 IVKLKELIQNNNR--LYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQ 119
IVK K + + R L L+ E + + + ++ ++ + Q+ +G+ Y+
Sbjct: 104 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGT 163
Query: 120 NGFFHRDLKPENLLV-SQGIIKIADFGLAREI-------KSGPPYTNYVGSRWYRAPEIL 171
+ HRDL N+LV ++ +KI DFGL + + K P + + WY APE L
Sbjct: 164 KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIF--WY-APESL 220
Query: 172 LQSELYSSKADMWAMGAIMAELFTF 196
+S+ +S +D+W+ G ++ ELFT+
Sbjct: 221 TESK-FSVASDVWSFGVVLYELFTY 244
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 108/203 (53%), Gaps = 17/203 (8%)
Query: 7 FKELGRGAFGRV----FQAFDEHTGEAVAIKELKQRYASWEDCLNL-REVKCLRKLNHSN 61
++LG+G FG V + ++TGE VA+K+L+ +++ E + RE++ L+ L H N
Sbjct: 15 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ--HSTEEHLRDFEREIEILKSLQHDN 72
Query: 62 IVKLKELIQNNNR--LYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQ 119
IVK K + + R L L+ E + + + ++ ++ + Q+ +G+ Y+
Sbjct: 73 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGT 132
Query: 120 NGFFHRDLKPENLLV-SQGIIKIADFGLAREIKSGPPY--TNYVGSR---WYRAPEILLQ 173
+ HRDL N+LV ++ +KI DFGL + + + G WY APE L +
Sbjct: 133 KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWY-APESLTE 191
Query: 174 SELYSSKADMWAMGAIMAELFTF 196
S+ +S +D+W+ G ++ ELFT+
Sbjct: 192 SK-FSVASDVWSFGVVLYELFTY 213
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 110/205 (53%), Gaps = 21/205 (10%)
Query: 7 FKELGRGAFGRV----FQAFDEHTGEAVAIKELKQRYASWEDCLNL-REVKCLRKLNHSN 61
++LG+G FG V + ++TGE VA+K+L+ +++ E + RE++ L+ L H N
Sbjct: 13 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ--HSTEEHLRDFEREIEILKSLQHDN 70
Query: 62 IVKLKELIQNNNR--LYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQ 119
IVK K + + R L L+ E + + + ++ ++ + Q+ +G+ Y+
Sbjct: 71 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGT 130
Query: 120 NGFFHRDLKPENLLV-SQGIIKIADFGLAREI-------KSGPPYTNYVGSRWYRAPEIL 171
+ HRDL N+LV ++ +KI DFGL + + K P + + WY APE L
Sbjct: 131 KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIF--WY-APESL 187
Query: 172 LQSELYSSKADMWAMGAIMAELFTF 196
+S+ +S +D+W+ G ++ ELFT+
Sbjct: 188 TESK-FSVASDVWSFGVVLYELFTY 211
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 103/211 (48%), Gaps = 32/211 (15%)
Query: 7 FKELGRGAFGRV----FQAFDEHTGEAVAIKELK-----QRYASWEDCLNLREVKCLRKL 57
++LG G FG+V + ++ TGE VA+K LK Q + W+ +E+ LR L
Sbjct: 19 IRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWK-----QEIDILRTL 73
Query: 58 NHSNIVKLKELI--QNNNRLYLVFECMECNLYQLMAARD---RKLFSEPEIKAWLFQVFQ 112
H +I+K K Q L LV E + L + RD R ++ + Q+ +
Sbjct: 74 YHEHIIKYKGCCEDQGEKSLQLVMEYVP-----LGSLRDYLPRHSIGLAQLLLFAQQICE 128
Query: 113 GLSYMHQNGFFHRDLKPENLLVSQG-IIKIADFGLAREIKSGPPYTNYVGSR-----WYR 166
G++Y+H + HR+L N+L+ ++KI DFGLA+ + G Y WY
Sbjct: 129 GMAYLHSQHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWY- 187
Query: 167 APEILLQSELYSSKADMWAMGAIMAELFTFC 197
APE L + + Y + +D+W+ G + EL T C
Sbjct: 188 APECLKEYKFYYA-SDVWSFGVTLYELLTHC 217
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 110/205 (53%), Gaps = 21/205 (10%)
Query: 7 FKELGRGAFGRV----FQAFDEHTGEAVAIKELKQRYASWEDCLNL-REVKCLRKLNHSN 61
++LG+G FG V + ++TGE VA+K+L+ +++ E + RE++ L+ L H N
Sbjct: 18 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ--HSTEEHLRDFEREIEILKSLQHDN 75
Query: 62 IVKLKELIQNNNR--LYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQ 119
IVK K + + R L L+ E + + + ++ ++ + Q+ +G+ Y+
Sbjct: 76 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGT 135
Query: 120 NGFFHRDLKPENLLV-SQGIIKIADFGLAREI-------KSGPPYTNYVGSRWYRAPEIL 171
+ HRDL N+LV ++ +KI DFGL + + K P + + WY APE L
Sbjct: 136 KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIF--WY-APESL 192
Query: 172 LQSELYSSKADMWAMGAIMAELFTF 196
+S+ +S +D+W+ G ++ ELFT+
Sbjct: 193 TESK-FSVASDVWSFGVVLYELFTY 216
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 110/205 (53%), Gaps = 21/205 (10%)
Query: 7 FKELGRGAFGRV----FQAFDEHTGEAVAIKELKQRYASWEDCLNL-REVKCLRKLNHSN 61
++LG+G FG V + ++TGE VA+K+L+ +++ E + RE++ L+ L H N
Sbjct: 33 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ--HSTEEHLRDFEREIEILKSLQHDN 90
Query: 62 IVKLKELIQNNNR--LYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQ 119
IVK K + + R L L+ E + + + ++ ++ + Q+ +G+ Y+
Sbjct: 91 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGT 150
Query: 120 NGFFHRDLKPENLLV-SQGIIKIADFGLAREI-------KSGPPYTNYVGSRWYRAPEIL 171
+ HRDL N+LV ++ +KI DFGL + + K P + + WY APE L
Sbjct: 151 KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIF--WY-APESL 207
Query: 172 LQSELYSSKADMWAMGAIMAELFTF 196
+S+ +S +D+W+ G ++ ELFT+
Sbjct: 208 TESK-FSVASDVWSFGVVLYELFTY 231
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 110/205 (53%), Gaps = 21/205 (10%)
Query: 7 FKELGRGAFGRV----FQAFDEHTGEAVAIKELKQRYASWEDCLNL-REVKCLRKLNHSN 61
++LG+G FG V + ++TGE VA+K+L+ +++ E + RE++ L+ L H N
Sbjct: 15 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ--HSTEEHLRDFEREIEILKSLQHDN 72
Query: 62 IVKLKELIQNNNR--LYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQ 119
IVK K + + R L L+ E + + + ++ ++ + Q+ +G+ Y+
Sbjct: 73 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGT 132
Query: 120 NGFFHRDLKPENLLV-SQGIIKIADFGLAREI-------KSGPPYTNYVGSRWYRAPEIL 171
+ HRDL N+LV ++ +KI DFGL + + K P + + WY APE L
Sbjct: 133 KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIF--WY-APESL 189
Query: 172 LQSELYSSKADMWAMGAIMAELFTF 196
+S+ +S +D+W+ G ++ ELFT+
Sbjct: 190 TESK-FSVASDVWSFGVVLYELFTY 213
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 110/205 (53%), Gaps = 21/205 (10%)
Query: 7 FKELGRGAFGRV----FQAFDEHTGEAVAIKELKQRYASWEDCLNL-REVKCLRKLNHSN 61
++LG+G FG V + ++TGE VA+K+L+ +++ E + RE++ L+ L H N
Sbjct: 19 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ--HSTEEHLRDFEREIEILKSLQHDN 76
Query: 62 IVKLKELIQNNNR--LYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQ 119
IVK K + + R L L+ E + + + ++ ++ + Q+ +G+ Y+
Sbjct: 77 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGT 136
Query: 120 NGFFHRDLKPENLLV-SQGIIKIADFGLAREI-------KSGPPYTNYVGSRWYRAPEIL 171
+ HRDL N+LV ++ +KI DFGL + + K P + + WY APE L
Sbjct: 137 KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIF--WY-APESL 193
Query: 172 LQSELYSSKADMWAMGAIMAELFTF 196
+S+ +S +D+W+ G ++ ELFT+
Sbjct: 194 TESK-FSVASDVWSFGVVLYELFTY 217
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 110/205 (53%), Gaps = 21/205 (10%)
Query: 7 FKELGRGAFGRV----FQAFDEHTGEAVAIKELKQRYASWEDCLNL-REVKCLRKLNHSN 61
++LG+G FG V + ++TGE VA+K+L+ +++ E + RE++ L+ L H N
Sbjct: 14 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ--HSTEEHLRDFEREIEILKSLQHDN 71
Query: 62 IVKLKELIQNNNR--LYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQ 119
IVK K + + R L L+ E + + + ++ ++ + Q+ +G+ Y+
Sbjct: 72 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGT 131
Query: 120 NGFFHRDLKPENLLV-SQGIIKIADFGLAREI-------KSGPPYTNYVGSRWYRAPEIL 171
+ HRDL N+LV ++ +KI DFGL + + K P + + WY APE L
Sbjct: 132 KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIF--WY-APESL 188
Query: 172 LQSELYSSKADMWAMGAIMAELFTF 196
+S+ +S +D+W+ G ++ ELFT+
Sbjct: 189 TESK-FSVASDVWSFGVVLYELFTY 212
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 74/275 (26%), Positives = 122/275 (44%), Gaps = 20/275 (7%)
Query: 1 MDKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLN--LREVKCLRKLN 58
+D + + LG+G FG V+ A ++ +A+K L + E + RE++ L
Sbjct: 14 IDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLR 73
Query: 59 HSNIVKLKELIQNNNRLYLVFE-CMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYM 117
H NI+++ + R+YL+ E LY+ + R F E ++ ++ L Y
Sbjct: 74 HPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGR--FDEQRSATFMEELADALHYC 131
Query: 118 HQNGFFHRDLKPENLLVS-QGIIKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQSEL 176
H+ HRD+KPENLL+ +G +KIADFG + S G+ Y PE +++ +
Sbjct: 132 HERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPSL-RRRXMCGTLDYLPPE-MIEGKT 189
Query: 177 YSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGV-LGSPTMDSWADGLRQARAIK 235
+ K D+W G + E P F S + +I V L P S ++ ++
Sbjct: 190 HDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKFPPFLSDGSKDLISKLLR 249
Query: 236 YQFPQ-LP----------RANLSALMPSASQDAIS 259
Y PQ LP +AN ++P Q S
Sbjct: 250 YHPPQRLPLKGVMEHPWVKANSRRVLPPVYQSTQS 284
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 74/275 (26%), Positives = 122/275 (44%), Gaps = 20/275 (7%)
Query: 1 MDKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLN--LREVKCLRKLN 58
+D + + LG+G FG V+ A ++ +A+K L + E + RE++ L
Sbjct: 13 IDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLR 72
Query: 59 HSNIVKLKELIQNNNRLYLVFE-CMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYM 117
H NI+++ + R+YL+ E LY+ + R F E ++ ++ L Y
Sbjct: 73 HPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGR--FDEQRSATFMEELADALHYC 130
Query: 118 HQNGFFHRDLKPENLLVS-QGIIKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQSEL 176
H+ HRD+KPENLL+ +G +KIADFG + S G+ Y PE +++ +
Sbjct: 131 HERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPSL-RRRXMCGTLDYLPPE-MIEGKT 188
Query: 177 YSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGV-LGSPTMDSWADGLRQARAIK 235
+ K D+W G + E P F S + +I V L P S ++ ++
Sbjct: 189 HDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKFPPFLSDGSKDLISKLLR 248
Query: 236 YQFPQ-LP----------RANLSALMPSASQDAIS 259
Y PQ LP +AN ++P Q S
Sbjct: 249 YHPPQRLPLKGVMEHPWVKANSRRVLPPVYQSTQS 283
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 110/205 (53%), Gaps = 21/205 (10%)
Query: 7 FKELGRGAFGRV----FQAFDEHTGEAVAIKELKQRYASWEDCLNL-REVKCLRKLNHSN 61
++LG+G FG V + ++TGE VA+K+L+ +++ E + RE++ L+ L H N
Sbjct: 15 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ--HSTEEHLRDFEREIEILKSLQHDN 72
Query: 62 IVKLKELIQNNNR--LYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQ 119
IVK K + + R L L+ E + + + ++ ++ + Q+ +G+ Y+
Sbjct: 73 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGT 132
Query: 120 NGFFHRDLKPENLLV-SQGIIKIADFGLAREI-------KSGPPYTNYVGSRWYRAPEIL 171
+ HRDL N+LV ++ +KI DFGL + + K P + + WY APE L
Sbjct: 133 KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIF--WY-APESL 189
Query: 172 LQSELYSSKADMWAMGAIMAELFTF 196
+S+ +S +D+W+ G ++ ELFT+
Sbjct: 190 TESK-FSVASDVWSFGVVLYELFTY 213
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 74/285 (25%), Positives = 137/285 (48%), Gaps = 38/285 (13%)
Query: 7 FKELGRGAFGRV----FQAFDEHTGEAVAIKELKQRYASWEDCLNL-REVKCLRKLNHSN 61
++LG+G FG V + ++TGE VA+K+L+ +++ E + RE++ L+ L H N
Sbjct: 33 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ--HSTEEHLRDFEREIEILKSLQHDN 90
Query: 62 IVKLKELIQNNNR--LYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQ 119
IVK K + + R L L+ E + + + ++ ++ + Q+ +G+ Y+
Sbjct: 91 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGT 150
Query: 120 NGFFHRDLKPENLLV-SQGIIKIADFGLAREI-------KSGPPYTNYVGSRWYRAPEIL 171
+ HRDL N+LV ++ +KI DFGL + + K P + + WY APE L
Sbjct: 151 KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIF--WY-APESL 207
Query: 172 LQSELYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQA 231
+S+ +S +D+W+ G ++ ELFT+ S + ++ G +Q
Sbjct: 208 TESK-FSVASDVWSFGVVLYELFTYIE--KSKSPPAEFMRMIG------------NDKQG 252
Query: 232 RAIKYQFPQLPRANLSALMPSASQDAISLFESLCSWDP--SKRPT 274
+ I + +L + N P D I + + C W+ ++RP+
Sbjct: 253 QMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTEC-WNNNVNQRPS 296
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 110/205 (53%), Gaps = 21/205 (10%)
Query: 7 FKELGRGAFGRV----FQAFDEHTGEAVAIKELKQRYASWEDCLNL-REVKCLRKLNHSN 61
++LG+G FG V + ++TGE VA+K+L+ +++ E + RE++ L+ L H N
Sbjct: 20 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ--HSTEEHLRDFEREIEILKSLQHDN 77
Query: 62 IVKLKELIQNNNR--LYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQ 119
IVK K + + R L L+ E + + + ++ ++ + Q+ +G+ Y+
Sbjct: 78 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGT 137
Query: 120 NGFFHRDLKPENLLV-SQGIIKIADFGLAREI-------KSGPPYTNYVGSRWYRAPEIL 171
+ HRDL N+LV ++ +KI DFGL + + K P + + WY APE L
Sbjct: 138 KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIF--WY-APESL 194
Query: 172 LQSELYSSKADMWAMGAIMAELFTF 196
+S+ +S +D+W+ G ++ ELFT+
Sbjct: 195 TESK-FSVASDVWSFGVVLYELFTY 218
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 110/205 (53%), Gaps = 21/205 (10%)
Query: 7 FKELGRGAFGRV----FQAFDEHTGEAVAIKELKQRYASWEDCLNL-REVKCLRKLNHSN 61
++LG+G FG V + ++TGE VA+K+L+ +++ E + RE++ L+ L H N
Sbjct: 22 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ--HSTEEHLRDFEREIEILKSLQHDN 79
Query: 62 IVKLKELIQNNNR--LYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQ 119
IVK K + + R L L+ E + + + ++ ++ + Q+ +G+ Y+
Sbjct: 80 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGT 139
Query: 120 NGFFHRDLKPENLLV-SQGIIKIADFGLAREI-------KSGPPYTNYVGSRWYRAPEIL 171
+ HRDL N+LV ++ +KI DFGL + + K P + + WY APE L
Sbjct: 140 KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIF--WY-APESL 196
Query: 172 LQSELYSSKADMWAMGAIMAELFTF 196
+S+ +S +D+W+ G ++ ELFT+
Sbjct: 197 TESK-FSVASDVWSFGVVLYELFTY 220
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 110/205 (53%), Gaps = 21/205 (10%)
Query: 7 FKELGRGAFGRV----FQAFDEHTGEAVAIKELKQRYASWEDCLNL-REVKCLRKLNHSN 61
++LG+G FG V + ++TGE VA+K+L+ +++ E + RE++ L+ L H N
Sbjct: 21 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ--HSTEEHLRDFEREIEILKSLQHDN 78
Query: 62 IVKLKELIQNNNR--LYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQ 119
IVK K + + R L L+ E + + + ++ ++ + Q+ +G+ Y+
Sbjct: 79 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGT 138
Query: 120 NGFFHRDLKPENLLV-SQGIIKIADFGLAREI-------KSGPPYTNYVGSRWYRAPEIL 171
+ HRDL N+LV ++ +KI DFGL + + K P + + WY APE L
Sbjct: 139 KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIF--WY-APESL 195
Query: 172 LQSELYSSKADMWAMGAIMAELFTF 196
+S+ +S +D+W+ G ++ ELFT+
Sbjct: 196 TESK-FSVASDVWSFGVVLYELFTY 219
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 72/286 (25%), Positives = 133/286 (46%), Gaps = 41/286 (14%)
Query: 9 ELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLNLREVKCLRKLNHSNIVKLKEL 68
+LG G +G V++ + VA+K LK+ E+ L +E ++++ H N+V+L +
Sbjct: 21 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFL--KEAAVMKEIKHPNLVQLLGV 78
Query: 69 IQNNNRLYLVFECMEC-NLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQNGFFHRDL 127
Y++ E M NL + +R+ + + Q+ + Y+ + F HRDL
Sbjct: 79 CTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDL 138
Query: 128 KPENLLVSQG-IIKIADFGLAREIKSGPPYTNYVGSRW---YRAPEILLQSELYSSKADM 183
N LV + ++K+ADFGL+R + +G YT G+++ + APE L ++ +S K+D+
Sbjct: 139 AARNCLVGENHLVKVADFGLSR-LMTGDTYTAPAGAKFPIKWTAPESLAYNK-FSIKSDV 196
Query: 184 WAMGAIMAELFTF-CPLFPGASEADQMYKICGVLGSPTMDSWADGLRQARAIKYQFPQLP 242
WA G ++ E+ T+ +PG + Q+Y++ + + + P+
Sbjct: 197 WAFGVLLWEIATYGMSPYPGI-DLSQVYELL-----------------EKDYRMERPE-- 236
Query: 243 RANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFFKRCF 288
+ L + W+PS RP+ AE H F+ F
Sbjct: 237 ---------GCPEKVYELMRACWQWNPSDRPSFAEI--HQAFETMF 271
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 74/286 (25%), Positives = 135/286 (47%), Gaps = 41/286 (14%)
Query: 9 ELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLNLREVKCLRKLNHSNIVKLKEL 68
+LG G +G V++ + VA+K LK+ E+ L +E ++++ H N+V+L +
Sbjct: 22 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFL--KEAAVMKEIKHPNLVQLLGV 79
Query: 69 IQNNNRLYLVFECMEC-NLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQNGFFHRDL 127
Y++ E M NL + +R+ + + Q+ + Y+ + F HRDL
Sbjct: 80 CTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDL 139
Query: 128 KPENLLVSQG-IIKIADFGLAREIKSGPPYTNYVGSRW---YRAPEILLQSELYSSKADM 183
N LV + ++K+ADFGL+R + +G YT G+++ + APE L ++ +S K+D+
Sbjct: 140 AARNCLVGENHLVKVADFGLSR-LMTGDTYTAPAGAKFPIKWTAPESLAYNK-FSIKSDV 197
Query: 184 WAMGAIMAELFTF-CPLFPGASEADQMYKICGVLGSPTMDSWADGLRQARAIKYQFPQLP 242
WA G ++ E+ T+ +PG + Q+Y++ + + + P+
Sbjct: 198 WAFGVLLWEIATYGMSPYPGI-DLSQVYELL-----------------EKDYRMERPEGC 239
Query: 243 RANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFFKRCF 288
+ LM + Q W+PS RP+ AE H F+ F
Sbjct: 240 PEKVYELMRACWQ-----------WNPSDRPSFAEI--HQAFETMF 272
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 107/203 (52%), Gaps = 17/203 (8%)
Query: 7 FKELGRGAFGRV----FQAFDEHTGEAVAIKELKQRYASWEDCLNL-REVKCLRKLNHSN 61
++LG+G FG V + ++TGE VA+K+L+ +++ E + RE++ L+ L H N
Sbjct: 16 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ--HSTEEHLRDFEREIEILKSLQHDN 73
Query: 62 IVKLKELIQNNNR--LYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQ 119
IVK K + + R L L+ E + + + ++ ++ + Q+ +G+ Y+
Sbjct: 74 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGT 133
Query: 120 NGFFHRDLKPENLLV-SQGIIKIADFGLAREIKSGPPYTNYVGSR-----WYRAPEILLQ 173
+ HR+L N+LV ++ +KI DFGL + + Y WY APE L +
Sbjct: 134 KRYIHRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWY-APESLTE 192
Query: 174 SELYSSKADMWAMGAIMAELFTF 196
S+ +S +D+W+ G ++ ELFT+
Sbjct: 193 SK-FSVASDVWSFGVVLYELFTY 214
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 103/211 (48%), Gaps = 32/211 (15%)
Query: 7 FKELGRGAFGRV----FQAFDEHTGEAVAIKELK-----QRYASWEDCLNLREVKCLRKL 57
++LG G FG+V + ++ TGE VA+K LK Q + W+ +E+ LR L
Sbjct: 19 IRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWK-----QEIDILRTL 73
Query: 58 NHSNIVKLKELI--QNNNRLYLVFECMECNLYQLMAARD---RKLFSEPEIKAWLFQVFQ 112
H +I+K K Q L LV E + L + RD R ++ + Q+ +
Sbjct: 74 YHEHIIKYKGCCEDQGEKSLQLVMEYVP-----LGSLRDYLPRHSIGLAQLLLFAQQICE 128
Query: 113 GLSYMHQNGFFHRDLKPENLLVSQG-IIKIADFGLAREIKSGPPYTNYVGSR-----WYR 166
G++Y+H + HR+L N+L+ ++KI DFGLA+ + G Y WY
Sbjct: 129 GMAYLHAQHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWY- 187
Query: 167 APEILLQSELYSSKADMWAMGAIMAELFTFC 197
APE L + + Y + +D+W+ G + EL T C
Sbjct: 188 APECLKEYKFYYA-SDVWSFGVTLYELLTHC 217
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 62/192 (32%), Positives = 105/192 (54%), Gaps = 11/192 (5%)
Query: 9 ELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLNLREVKCLRKLNHSNIVKLKEL 68
+LG+G FG V+ T VAIK LK S E L +E + ++KL H +V+L +
Sbjct: 18 KLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPEAFL--QEAQVMKKLRHEKLVQLYAV 74
Query: 69 IQNNNRLYLVFECM-ECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQNGFFHRDL 127
+ + +Y+V E M + +L + K P++ Q+ G++Y+ + + HRDL
Sbjct: 75 V-SEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDL 133
Query: 128 KPENLLVSQGII-KIADFGLAREIKSGPPYTNYVGSRW---YRAPEILLQSELYSSKADM 183
+ N+LV + ++ K+ADFGLAR I+ YT G+++ + APE L ++ K+D+
Sbjct: 134 RAANILVGENLVCKVADFGLARLIEDN-EYTARQGAKFPIKWTAPEAALYGR-FTIKSDV 191
Query: 184 WAMGAIMAELFT 195
W+ G ++ EL T
Sbjct: 192 WSFGILLTELTT 203
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 110/210 (52%), Gaps = 11/210 (5%)
Query: 9 ELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLNLREVKCLRKLNHSNIVKLKEL 68
+LG G +G V+ + VA+K LK+ E+ L +E ++++ H N+V+L +
Sbjct: 39 KLGGGQYGEVYVGVWKKYSLTVAVKTLKEDTMEVEEFL--KEAAVMKEIKHPNLVQLLGV 96
Query: 69 IQNNNRLYLVFECMEC-NLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQNGFFHRDL 127
Y+V E M NL + +R+ + + Q+ + Y+ + F HRDL
Sbjct: 97 CTLEPPFYIVTEYMPYGNLLDYLRECNREEVTAVVLLYMATQISSAMEYLEKKNFIHRDL 156
Query: 128 KPENLLVSQG-IIKIADFGLAREIKSGPPYTNYVGSRW---YRAPEILLQSELYSSKADM 183
N LV + ++K+ADFGL+R + +G YT + G+++ + APE L + +S K+D+
Sbjct: 157 AARNCLVGENHVVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAPESLAYNT-FSIKSDV 214
Query: 184 WAMGAIMAELFTF-CPLFPGASEADQMYKI 212
WA G ++ E+ T+ +PG + Q+Y +
Sbjct: 215 WAFGVLLWEIATYGMSPYPGI-DLSQVYDL 243
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 62/192 (32%), Positives = 105/192 (54%), Gaps = 11/192 (5%)
Query: 9 ELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLNLREVKCLRKLNHSNIVKLKEL 68
+LG+G FG V+ T VAIK LK S E L +E + ++KL H +V+L +
Sbjct: 25 KLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPEAFL--QEAQVMKKLRHEKLVQLYAV 81
Query: 69 IQNNNRLYLVFECM-ECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQNGFFHRDL 127
+ + +Y+V E M + +L + K P++ Q+ G++Y+ + + HRDL
Sbjct: 82 V-SEEPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDL 140
Query: 128 KPENLLVSQGII-KIADFGLAREIKSGPPYTNYVGSRW---YRAPEILLQSELYSSKADM 183
+ N+LV + ++ K+ADFGLAR I+ YT G+++ + APE L ++ K+D+
Sbjct: 141 RAANILVGENLVCKVADFGLARLIEDN-EYTARQGAKFPIKWTAPEAALYGR-FTIKSDV 198
Query: 184 WAMGAIMAELFT 195
W+ G ++ EL T
Sbjct: 199 WSFGILLTELTT 210
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 79/293 (26%), Positives = 127/293 (43%), Gaps = 39/293 (13%)
Query: 2 DKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLNLREVKC-LRKLNHS 60
D ELGRGA+G V + +G+ +A+K ++ S E L ++ +R ++
Sbjct: 51 DDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCP 110
Query: 61 NIVKLKELIQNNNRLYLVFECMECNLYQLMAARDRKLFSEPE--IKAWLFQVFQGLSYMH 118
V + +++ E M+ +L + K + PE + + + L ++H
Sbjct: 111 FTVTFYGALFREGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLH 170
Query: 119 QN-GFFHRDLKPENLLVSQ-GIIKIADFGLAREIKSGPPYTNYVGSRWYRAPEIL---LQ 173
HRD+KP N+L++ G +K+ DFG++ + T G + Y APE + L
Sbjct: 171 SKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDSVAKTIDAGCKPYMAPERINPELN 230
Query: 174 SELYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQAR- 232
+ YS K+D+W++G M EL +L P DSW +Q +
Sbjct: 231 QKGYSVKSDIWSLGITMIEL--------------------AILRFP-YDSWGTPFQQLKQ 269
Query: 233 AIKYQFPQLPRANLSALMPSASQDAISLFESLCSWDPSK-RPTAAEALQHPFF 284
++ PQLP SA F S C SK RPT E +QHPFF
Sbjct: 270 VVEEPSPQLPADKFSAEFVD--------FTSQCLKKNSKERPTYPELMQHPFF 314
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 101/197 (51%), Gaps = 19/197 (9%)
Query: 8 KELGRGAFGRVFQAFDEHTG-----EAVAIKELKQRYASWEDCLNLREVKCLRKLNHSNI 62
+E+G G FG V H G + VAIK +++ S ED + E + + KL+H +
Sbjct: 14 QEIGSGQFGLV------HLGYWLNKDKVAIKTIREGAMSEEDFIE--EAEVMMKLSHPKL 65
Query: 63 VKLKELIQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQNGF 122
V+L + + LV E ME R LF+ + V +G++Y+ +
Sbjct: 66 VQLYGVCLEQAPICLVTEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACV 125
Query: 123 FHRDLKPENLLVSQG-IIKIADFGLAREIKSGPPYTNYVGSRW---YRAPEILLQSELYS 178
HRDL N LV + +IK++DFG+ R + YT+ G+++ + +PE+ S YS
Sbjct: 126 IHRDLAARNCLVGENQVIKVSDFGMTRFVLD-DQYTSSTGTKFPVKWASPEVFSFSR-YS 183
Query: 179 SKADMWAMGAIMAELFT 195
SK+D+W+ G +M E+F+
Sbjct: 184 SKSDVWSFGVLMWEVFS 200
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 62/192 (32%), Positives = 105/192 (54%), Gaps = 11/192 (5%)
Query: 9 ELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLNLREVKCLRKLNHSNIVKLKEL 68
+LG+G FG V+ T VAIK LK S E L +E + ++KL H +V+L +
Sbjct: 191 KLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPEAFL--QEAQVMKKLRHEKLVQLYAV 247
Query: 69 IQNNNRLYLVFECM-ECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQNGFFHRDL 127
+ + +Y+V E M + +L + K P++ Q+ G++Y+ + + HRDL
Sbjct: 248 V-SEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDL 306
Query: 128 KPENLLVSQGII-KIADFGLAREIKSGPPYTNYVGSRW---YRAPEILLQSELYSSKADM 183
+ N+LV + ++ K+ADFGLAR I+ YT G+++ + APE L ++ K+D+
Sbjct: 307 RAANILVGENLVCKVADFGLARLIEDN-EYTARQGAKFPIKWTAPEAALYGR-FTIKSDV 364
Query: 184 WAMGAIMAELFT 195
W+ G ++ EL T
Sbjct: 365 WSFGILLTELTT 376
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 73/286 (25%), Positives = 135/286 (47%), Gaps = 41/286 (14%)
Query: 9 ELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLNLREVKCLRKLNHSNIVKLKEL 68
+LG G +G V++ + VA+K LK+ E+ L +E ++++ H N+V+L +
Sbjct: 21 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFL--KEAAVMKEIKHPNLVQLLGV 78
Query: 69 IQNNNRLYLVFECMEC-NLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQNGFFHRDL 127
Y++ E M NL + +R+ + + Q+ + Y+ + F HRDL
Sbjct: 79 CTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDL 138
Query: 128 KPENLLVSQG-IIKIADFGLAREIKSGPPYTNYVGSRW---YRAPEILLQSELYSSKADM 183
N LV + ++K+ADFGL+R + +G T + G+++ + APE L ++ +S K+D+
Sbjct: 139 AARNCLVGENHLVKVADFGLSR-LMTGDTXTAHAGAKFPIKWTAPESLAYNK-FSIKSDV 196
Query: 184 WAMGAIMAELFTF-CPLFPGASEADQMYKICGVLGSPTMDSWADGLRQARAIKYQFPQLP 242
WA G ++ E+ T+ +PG + Q+Y++ + + + P+
Sbjct: 197 WAFGVLLWEIATYGMSPYPGI-DLSQVYELL-----------------EKDYRMERPEGC 238
Query: 243 RANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFFKRCF 288
+ LM + Q W+PS RP+ AE H F+ F
Sbjct: 239 PEKVYELMRACWQ-----------WNPSDRPSFAEI--HQAFETMF 271
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 62/192 (32%), Positives = 105/192 (54%), Gaps = 11/192 (5%)
Query: 9 ELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLNLREVKCLRKLNHSNIVKLKEL 68
+LG+G FG V+ T VAIK LK S E L +E + ++KL H +V+L +
Sbjct: 191 KLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPEAFL--QEAQVMKKLRHEKLVQLYAV 247
Query: 69 IQNNNRLYLVFECM-ECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQNGFFHRDL 127
+ + +Y+V E M + +L + K P++ Q+ G++Y+ + + HRDL
Sbjct: 248 V-SEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDL 306
Query: 128 KPENLLVSQGII-KIADFGLAREIKSGPPYTNYVGSRW---YRAPEILLQSELYSSKADM 183
+ N+LV + ++ K+ADFGLAR I+ YT G+++ + APE L ++ K+D+
Sbjct: 307 RAANILVGENLVCKVADFGLARLIEDN-EYTARQGAKFPIKWTAPEAALYGR-FTIKSDV 364
Query: 184 WAMGAIMAELFT 195
W+ G ++ EL T
Sbjct: 365 WSFGILLTELTT 376
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 101/206 (49%), Gaps = 21/206 (10%)
Query: 7 FKELGRGAFGRV----FQAFDEHTGEAVAIKELKQRYASWEDCLNLREVKCLRKLNHSNI 62
+LG+G FG V + ++TG VA+K+L+ + RE++ L+ L+ I
Sbjct: 15 ISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQ-REIQILKALHSDFI 73
Query: 63 VKLKELIQNNNR--LYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQN 120
VK + + R L LV E + + R R + + Q+ +G+ Y+
Sbjct: 74 VKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSR 133
Query: 121 GFFHRDLKPENLLV-SQGIIKIADFGLAREIKSGPPYTNYVGSR--------WYRAPEIL 171
HRDL N+LV S+ +KIADFGLA+ + P +Y R WY APE L
Sbjct: 134 RCVHRDLAARNILVESEAHVKIADFGLAKLL---PLDKDYYVVREPGQSPIFWY-APESL 189
Query: 172 LQSELYSSKADMWAMGAIMAELFTFC 197
++S ++D+W+ G ++ ELFT+C
Sbjct: 190 -SDNIFSRQSDVWSFGVVLYELFTYC 214
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 101/206 (49%), Gaps = 21/206 (10%)
Query: 7 FKELGRGAFGRV----FQAFDEHTGEAVAIKELKQRYASWEDCLNLREVKCLRKLNHSNI 62
+LG+G FG V + ++TG VA+K+L+ + RE++ L+ L+ I
Sbjct: 16 ISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQ-REIQILKALHSDFI 74
Query: 63 VKLKELIQNNNR--LYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQN 120
VK + + R L LV E + + R R + + Q+ +G+ Y+
Sbjct: 75 VKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSR 134
Query: 121 GFFHRDLKPENLLV-SQGIIKIADFGLAREIKSGPPYTNYVGSR--------WYRAPEIL 171
HRDL N+LV S+ +KIADFGLA+ + P +Y R WY APE L
Sbjct: 135 RCVHRDLAARNILVESEAHVKIADFGLAKLL---PLDKDYYVVREPGQSPIFWY-APESL 190
Query: 172 LQSELYSSKADMWAMGAIMAELFTFC 197
++S ++D+W+ G ++ ELFT+C
Sbjct: 191 -SDNIFSRQSDVWSFGVVLYELFTYC 215
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 59/195 (30%), Positives = 105/195 (53%), Gaps = 12/195 (6%)
Query: 13 GAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLN-LREVKCLRKLNHSNIVKLKELIQN 71
G FG+V++A ++ T A K + + S E+ + + E+ L +H NIVKL +
Sbjct: 21 GDFGKVYKAQNKETSVLAAAKVIDTK--SEEELEDYMVEIDILASCDHPNIVKLLDAFYY 78
Query: 72 NNRLYLVFE-CMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQNGFFHRDLKPE 130
N L+++ E C + +M +R L +E +I+ Q L+Y+H N HRDLK
Sbjct: 79 ENNLWILIEFCAGGAVDAVMLELERPL-TESQIQVVCKQTLDALNYLHDNKIIHRDLKAG 137
Query: 131 NLLVS-QGIIKIADFGL-AREIKSGPPYTN-YVGSRWYRAPEILL----QSELYSSKADM 183
N+L + G IK+ADFG+ A+ ++ + ++G+ ++ APE+++ + Y KAD+
Sbjct: 138 NILFTLDGDIKLADFGVSAKNTRTXIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADV 197
Query: 184 WAMGAIMAELFTFCP 198
W++G + E+ P
Sbjct: 198 WSLGITLIEMAEIEP 212
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 98/196 (50%), Gaps = 11/196 (5%)
Query: 10 LGRGAFGRVFQAFDEHTGE---AVAIKELKQRYASWEDCLNLREVKCLRKLNHSNIVKLK 66
+G G FG V + G+ AVAIK LK Y + L E + + +H N+V L+
Sbjct: 51 IGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYTEKQRRDFLCEASIMGQFDHPNVVHLE 110
Query: 67 ELIQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQNGFFHRD 126
++ + +V E ME + F+ ++ L + G+ Y+ G+ HRD
Sbjct: 111 GVVTRGKPVMIVIEFMENGALDAFLRKHDGQFTVIQLVGMLRGIAAGMRYLADMGYVHRD 170
Query: 127 LKPENLLVSQGII-KIADFGLAREIKSGPP--YTNYVGS---RWYRAPEILLQSELYSSK 180
L N+LV+ ++ K++DFGL+R I+ P YT G RW APE +Q ++S
Sbjct: 171 LAARNILVNSNLVCKVSDFGLSRVIEDDPEAVYTTTGGKIPVRW-TAPE-AIQYRKFTSA 228
Query: 181 ADMWAMGAIMAELFTF 196
+D+W+ G +M E+ ++
Sbjct: 229 SDVWSYGIVMWEVMSY 244
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 62/192 (32%), Positives = 105/192 (54%), Gaps = 11/192 (5%)
Query: 9 ELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLNLREVKCLRKLNHSNIVKLKEL 68
+LG+G FG V+ T VAIK LK S E L +E + ++KL H +V+L +
Sbjct: 191 KLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPEAFL--QEAQVMKKLRHEKLVQLYAV 247
Query: 69 IQNNNRLYLVFECM-ECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQNGFFHRDL 127
+ + +Y+V E M + +L + K P++ Q+ G++Y+ + + HRDL
Sbjct: 248 V-SEEPIYIVGEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDL 306
Query: 128 KPENLLVSQGII-KIADFGLAREIKSGPPYTNYVGSRW---YRAPEILLQSELYSSKADM 183
+ N+LV + ++ K+ADFGLAR I+ YT G+++ + APE L ++ K+D+
Sbjct: 307 RAANILVGENLVCKVADFGLARLIEDN-EYTARQGAKFPIKWTAPEAALYGR-FTIKSDV 364
Query: 184 WAMGAIMAELFT 195
W+ G ++ EL T
Sbjct: 365 WSFGILLTELTT 376
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 62/192 (32%), Positives = 105/192 (54%), Gaps = 11/192 (5%)
Query: 9 ELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLNLREVKCLRKLNHSNIVKLKEL 68
+LG+G FG V+ T VAIK LK S E L +E + ++KL H +V+L +
Sbjct: 22 KLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPEAFL--QEAQVMKKLRHEKLVQLYAV 78
Query: 69 IQNNNRLYLVFECM-ECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQNGFFHRDL 127
+ + +Y+V E M + +L + K P++ Q+ G++Y+ + + HRDL
Sbjct: 79 V-SEEPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVERMNYVHRDL 137
Query: 128 KPENLLVSQGII-KIADFGLAREIKSGPPYTNYVGSRW---YRAPEILLQSELYSSKADM 183
+ N+LV + ++ K+ADFGLAR I+ YT G+++ + APE L ++ K+D+
Sbjct: 138 RAANILVGENLVCKVADFGLARLIEDN-EYTARQGAKFPIKWTAPEAALYGR-FTIKSDV 195
Query: 184 WAMGAIMAELFT 195
W+ G ++ EL T
Sbjct: 196 WSFGILLTELTT 207
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 105/200 (52%), Gaps = 14/200 (7%)
Query: 8 KELGRGAFGRVFQA-FDEHTGEA---VAIKELKQRYASWEDCLNLREVKCLRKLNHSNIV 63
K +G G FG V++ +G+ VAIK LK Y + L E + + +H NI+
Sbjct: 50 KVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNII 109
Query: 64 KLKELIQNNNRLYLVFECMECN-LYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQNGF 122
+L+ +I + ++ E ME L + + +D + FS ++ L + G+ Y+ +
Sbjct: 110 RLEGVISKYKPMMIITEYMENGALDKFLREKDGE-FSVLQLVGMLRGIAAGMKYLANMNY 168
Query: 123 FHRDLKPENLLVSQGII-KIADFGLAREIKSGP--PYTNYVGS---RWYRAPEILLQSEL 176
HRDL N+LV+ ++ K++DFGL+R ++ P YT G RW APE + +
Sbjct: 169 VHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRW-TAPEAISYRK- 226
Query: 177 YSSKADMWAMGAIMAELFTF 196
++S +D+W+ G +M E+ T+
Sbjct: 227 FTSASDVWSFGIVMWEVMTY 246
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 101/206 (49%), Gaps = 21/206 (10%)
Query: 7 FKELGRGAFGRV----FQAFDEHTGEAVAIKELKQRYASWEDCLNLREVKCLRKLNHSNI 62
+LG+G FG V + ++TG VA+K+L+ + RE++ L+ L+ I
Sbjct: 28 ISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQ-REIQILKALHSDFI 86
Query: 63 VKLKELIQNNNR--LYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQN 120
VK + + R L LV E + + R R + + Q+ +G+ Y+
Sbjct: 87 VKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSR 146
Query: 121 GFFHRDLKPENLLV-SQGIIKIADFGLAREIKSGPPYTNYVGSR--------WYRAPEIL 171
HRDL N+LV S+ +KIADFGLA+ + P +Y R WY APE L
Sbjct: 147 RCVHRDLAARNILVESEAHVKIADFGLAKLL---PLDKDYYVVREPGQSPIFWY-APESL 202
Query: 172 LQSELYSSKADMWAMGAIMAELFTFC 197
++S ++D+W+ G ++ ELFT+C
Sbjct: 203 -SDNIFSRQSDVWSFGVVLYELFTYC 227
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 101/212 (47%), Gaps = 11/212 (5%)
Query: 8 KELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWED---CLNLREVKCLRKLNHSNIVK 64
K LG+G+FG+VF A + T + AIK LK+ +D C + + H +
Sbjct: 23 KMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTH 82
Query: 65 LKELIQNNNRLYLVFECMECN--LYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQNGF 122
+ Q L+ V E + +Y + + F + ++ GL ++H G
Sbjct: 83 MFCTFQTKENLFFVMEYLNGGDLMYHIQSCHK---FDLSRATFYAAEIILGLQFLHSKGI 139
Query: 123 FHRDLKPENLLVSQ-GIIKIADFGLAREIKSGPPYTN-YVGSRWYRAPEILLQSELYSSK 180
+RDLK +N+L+ + G IKIADFG+ +E G TN + G+ Y APEILL + Y+
Sbjct: 140 VYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNXFCGTPDYIAPEILL-GQKYNHS 198
Query: 181 ADMWAMGAIMAELFTFCPLFPGASEADQMYKI 212
D W+ G ++ E+ F G E + + I
Sbjct: 199 VDWWSFGVLLYEMLIGQSPFHGQDEEELFHSI 230
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 104/219 (47%), Gaps = 11/219 (5%)
Query: 1 MDKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWED---CLNLREVKCLRKL 57
++ + K LG+G+FG+VF A + T + AIK LK+ +D C + +
Sbjct: 17 IEDFELHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAW 76
Query: 58 NHSNIVKLKELIQNNNRLYLVFECMECN--LYQLMAARDRKLFSEPEIKAWLFQVFQGLS 115
H + + Q L+ V E + +Y + + F + ++ GL
Sbjct: 77 EHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHK---FDLSRATFYAAEIILGLQ 133
Query: 116 YMHQNGFFHRDLKPENLLVSQ-GIIKIADFGLAREIKSGPPYTN-YVGSRWYRAPEILLQ 173
++H G +RDLK +N+L+ + G IKIADFG+ +E G TN + G+ Y APEILL
Sbjct: 134 FLHSKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNEFCGTPDYIAPEILL- 192
Query: 174 SELYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKI 212
+ Y+ D W+ G ++ E+ F G E + + I
Sbjct: 193 GQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSI 231
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 133/286 (46%), Gaps = 41/286 (14%)
Query: 9 ELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLNLREVKCLRKLNHSNIVKLKEL 68
+LG G +G V++ + VA+K LK+ E+ L +E ++++ H N+V+L +
Sbjct: 25 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFL--KEAAVMKEIKHPNLVQLLGV 82
Query: 69 IQNNNRLYLVFECMEC-NLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQNGFFHRDL 127
Y++ E M NL + +R+ + + Q+ + Y+ + F HRDL
Sbjct: 83 CTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDL 142
Query: 128 KPENLLVSQG-IIKIADFGLAREIKSGPPYTNYVGSRW---YRAPEILLQSELYSSKADM 183
N LV + ++K+ADFGL+R + +G T + G+++ + APE L ++ +S K+D+
Sbjct: 143 AARNCLVGENHLVKVADFGLSR-LMTGDTXTAHAGAKFPIKWTAPESLAYNK-FSIKSDV 200
Query: 184 WAMGAIMAELFTF-CPLFPGASEADQMYKICGVLGSPTMDSWADGLRQARAIKYQFPQLP 242
WA G ++ E+ T+ +PG + Q+Y++ + + + P+
Sbjct: 201 WAFGVLLWEIATYGMSPYPGI-DLSQVYELL-----------------EKDYRMERPE-- 240
Query: 243 RANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFFKRCF 288
+ L + W+PS RP+ AE H F+ F
Sbjct: 241 ---------GCPEKVYELMRACWQWNPSDRPSFAEI--HQAFETMF 275
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 62/192 (32%), Positives = 105/192 (54%), Gaps = 11/192 (5%)
Query: 9 ELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLNLREVKCLRKLNHSNIVKLKEL 68
+LG+G FG V+ T VAIK LK S E L +E + ++KL H +V+L +
Sbjct: 25 KLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPEAFL--QEAQVMKKLRHEKLVQLYAV 81
Query: 69 IQNNNRLYLVFECM-ECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQNGFFHRDL 127
+ + +Y+V E M + +L + K P++ Q+ G++Y+ + + HRDL
Sbjct: 82 V-SEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDL 140
Query: 128 KPENLLVSQGII-KIADFGLAREIKSGPPYTNYVGSRW---YRAPEILLQSELYSSKADM 183
+ N+LV + ++ K+ADFGLAR I+ YT G+++ + APE L ++ K+D+
Sbjct: 141 RAANILVGENLVCKVADFGLARLIEDN-EYTARQGAKFPIKWTAPEAALYGR-FTIKSDV 198
Query: 184 WAMGAIMAELFT 195
W+ G ++ EL T
Sbjct: 199 WSFGILLTELTT 210
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 62/192 (32%), Positives = 105/192 (54%), Gaps = 11/192 (5%)
Query: 9 ELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLNLREVKCLRKLNHSNIVKLKEL 68
+LG+G FG V+ T VAIK LK S E L +E + ++KL H +V+L +
Sbjct: 16 KLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPEAFL--QEAQVMKKLRHEKLVQLYAV 72
Query: 69 IQNNNRLYLVFECM-ECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQNGFFHRDL 127
+ + +Y+V E M + +L + K P++ Q+ G++Y+ + + HRDL
Sbjct: 73 V-SEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDL 131
Query: 128 KPENLLVSQGII-KIADFGLAREIKSGPPYTNYVGSRW---YRAPEILLQSELYSSKADM 183
+ N+LV + ++ K+ADFGLAR I+ YT G+++ + APE L ++ K+D+
Sbjct: 132 RAANILVGENLVCKVADFGLARLIEDN-EYTARQGAKFPIKWTAPEAALYGR-FTIKSDV 189
Query: 184 WAMGAIMAELFT 195
W+ G ++ EL T
Sbjct: 190 WSFGILLTELTT 201
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 64/194 (32%), Positives = 102/194 (52%), Gaps = 11/194 (5%)
Query: 7 FKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLNLREVKCLRKLNHSNIVKLK 66
K LG G FG V+ + VAIK LK S E L E + ++KL H +V+L
Sbjct: 14 IKRLGNGQFGEVWMG-TWNGNTKVAIKTLKPGTMSPESFL--EEAQIMKKLKHDKLVQLY 70
Query: 67 ELIQNNNRLYLVFECM-ECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQNGFFHR 125
++ + +Y+V E M + +L + + + P + QV G++Y+ + + HR
Sbjct: 71 AVV-SEEPIYIVTEYMNKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMNYIHR 129
Query: 126 DLKPENLLVSQGII-KIADFGLAREIKSGPPYTNYVGSRW---YRAPEILLQSELYSSKA 181
DL+ N+LV G+I KIADFGLAR I+ T G+++ + APE L ++ K+
Sbjct: 130 DLRSANILVGNGLICKIADFGLARLIEDN-EXTARQGAKFPIKWTAPEAALYGR-FTIKS 187
Query: 182 DMWAMGAIMAELFT 195
D+W+ G ++ EL T
Sbjct: 188 DVWSFGILLTELVT 201
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 80/297 (26%), Positives = 130/297 (43%), Gaps = 49/297 (16%)
Query: 1 MDKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLNLREVKCLRKLNHS 60
D Y +++G G++ + + T A+K + + S D E+ LR H
Sbjct: 21 TDGYEVKEDIGVGSYSVCKRCIHKATNXEFAVKIIDK---SKRDPTEEIEI-LLRYGQHP 76
Query: 61 NIVKLKELIQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQN 120
NI+ LK++ + +Y+V E + R +K FSE E A LF + + + Y+H
Sbjct: 77 NIITLKDVYDDGKYVYVVTELXKGGELLDKILR-QKFFSEREASAVLFTITKTVEYLHAQ 135
Query: 121 GFFHRDLKPENLLV-----SQGIIKIADFGLAREIKS------GPPYT-NYVGSRWYRAP 168
G HRDLKP N+L + I+I DFG A+++++ P YT N+V AP
Sbjct: 136 GVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLXTPCYTANFV------AP 189
Query: 169 EILLQSELYSSKADMWAMGAIMAELFT-FCPLFPGASEADQMYKICGVLGSPTMDSWADG 227
E+ L+ + Y + D+W++G ++ T + P G + + +I +GS S + G
Sbjct: 190 EV-LERQGYDAACDIWSLGVLLYTXLTGYTPFANGPDDTPE--EILARIGSGKF-SLSGG 245
Query: 228 LRQARAIKYQFPQLPRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFF 284
S S A L DP +R TAA L+HP+
Sbjct: 246 YWN---------------------SVSDTAKDLVSKXLHVDPHQRLTAALVLRHPWI 281
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 112/204 (54%), Gaps = 24/204 (11%)
Query: 8 KELGRGAFGRVFQA-FDEHTGEAVAIKELKQRYASWEDCLNLREVKCLRKLNHSNIVKLK 66
K+LG G FG V+ A +++HT VA+K +K S E L E ++ L H +VKL
Sbjct: 188 KKLGAGQFGEVWMATYNKHT--KVAVKTMKPGSMSVEAFLA--EANVMKTLQHDKLVKLH 243
Query: 67 ELIQNNNRLYLVFECM-ECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQNGFFHR 125
++ +Y++ E M + +L + + + P++ + Q+ +G++++ Q + HR
Sbjct: 244 AVV-TKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHR 302
Query: 126 DLKPENLLVSQGII-KIADFGLAREIKSGPPYTNYVGSRW---YRAPEILLQSELYSSKA 181
DL+ N+LVS ++ KIADFGLAR VG+++ + APE + ++ K+
Sbjct: 303 DLRAANILVSASLVCKIADFGLAR-----------VGAKFPIKWTAPEA-INFGSFTIKS 350
Query: 182 DMWAMGAIMAELFTFCPL-FPGAS 204
D+W+ G ++ E+ T+ + +PG S
Sbjct: 351 DVWSFGILLMEIVTYGRIPYPGMS 374
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 62/192 (32%), Positives = 105/192 (54%), Gaps = 11/192 (5%)
Query: 9 ELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLNLREVKCLRKLNHSNIVKLKEL 68
+LG+G FG V+ T VAIK LK S E L +E + ++KL H +V+L +
Sbjct: 25 KLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPEAFL--QEAQVMKKLRHEKLVQLYAV 81
Query: 69 IQNNNRLYLVFECM-ECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQNGFFHRDL 127
+ + +Y+V E M + +L + K P++ Q+ G++Y+ + + HRDL
Sbjct: 82 V-SEEPIYIVCEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDL 140
Query: 128 KPENLLVSQGII-KIADFGLAREIKSGPPYTNYVGSRW---YRAPEILLQSELYSSKADM 183
+ N+LV + ++ K+ADFGLAR I+ YT G+++ + APE L ++ K+D+
Sbjct: 141 RAANILVGENLVCKVADFGLARLIEDN-EYTARQGAKFPIKWTAPEAALYGR-FTIKSDV 198
Query: 184 WAMGAIMAELFT 195
W+ G ++ EL T
Sbjct: 199 WSFGILLTELTT 210
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 62/192 (32%), Positives = 105/192 (54%), Gaps = 11/192 (5%)
Query: 9 ELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLNLREVKCLRKLNHSNIVKLKEL 68
+LG+G FG V+ T VAIK LK S E L +E + ++KL H +V+L +
Sbjct: 14 KLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPEAFL--QEAQVMKKLRHEKLVQLYAV 70
Query: 69 IQNNNRLYLVFECM-ECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQNGFFHRDL 127
+ + +Y+V E M + +L + K P++ Q+ G++Y+ + + HRDL
Sbjct: 71 V-SEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDL 129
Query: 128 KPENLLVSQGII-KIADFGLAREIKSGPPYTNYVGSRW---YRAPEILLQSELYSSKADM 183
+ N+LV + ++ K+ADFGLAR I+ YT G+++ + APE L ++ K+D+
Sbjct: 130 RAANILVGENLVCKVADFGLARLIEDN-EYTARQGAKFPIKWTAPEAALYGR-FTIKSDV 187
Query: 184 WAMGAIMAELFT 195
W+ G ++ EL T
Sbjct: 188 WSFGILLTELTT 199
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 84.7 bits (208), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 62/192 (32%), Positives = 103/192 (53%), Gaps = 11/192 (5%)
Query: 9 ELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLNLREVKCLRKLNHSNIVKLKEL 68
+LG+G FG V+ T VAIK LK S E L +E + ++KL H +V+L +
Sbjct: 25 KLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPEAFL--QEAQVMKKLRHEKLVQLYAV 81
Query: 69 IQNNNRLYLVFECMECN-LYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQNGFFHRDL 127
+ + +Y+V E M L + K P++ Q+ G++Y+ + + HRDL
Sbjct: 82 V-SEEPIYIVMEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDL 140
Query: 128 KPENLLVSQGII-KIADFGLAREIKSGPPYTNYVGSRW---YRAPEILLQSELYSSKADM 183
+ N+LV + ++ K+ADFGLAR I+ YT G+++ + APE L ++ K+D+
Sbjct: 141 RAANILVGENLVCKVADFGLARLIEDN-EYTARQGAKFPIKWTAPEAALYGR-FTIKSDV 198
Query: 184 WAMGAIMAELFT 195
W+ G ++ EL T
Sbjct: 199 WSFGILLTELTT 210
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 84.7 bits (208), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 81/305 (26%), Positives = 137/305 (44%), Gaps = 56/305 (18%)
Query: 2 DKYSGFKELGRGAFGRVFQA----FDEH-TGEAVAIKELKQRYASWEDCLNLREVKCLRK 56
D+ + K LGRGAFG+V +A D+ T VA+K LK+ E + E+K L
Sbjct: 27 DRLNLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIH 86
Query: 57 LNHS-NIVKL-KELIQNNNRLYLVFE-CMECNLYQLMAARD----------RKLFSEPEI 103
+ H N+V L + L ++ E C NL + ++ + + +
Sbjct: 87 IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHL 146
Query: 104 KAWLFQVFQGLSYMHQNGFFHRDLKPENLLVSQ-GIIKIADFGLAREIKSGPPYTNYVGS 162
+ FQV +G+ ++ HRDL N+L+S+ ++KI DFGLAR+I P Y +
Sbjct: 147 ICYSFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDA 206
Query: 163 RW---YRAPEILLQSELYSSKADMWAMGAIMAELFTF-CPLFPGASEADQMYKICGVLGS 218
R + APE + +Y+ ++D+W+ G ++ E+F+ +PG ++ C L
Sbjct: 207 RLPLKWMAPETIF-DRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEF---CRRLKE 262
Query: 219 PTMDSWADGLRQARAIKYQFPQLPRANLSALMPSASQDAISLFESLCSW--DPSKRPTAA 276
T + RA Y P++ + L W +PS+RPT +
Sbjct: 263 GT---------RMRAPDYTTPEMYQTMLDC------------------WHGEPSQRPTFS 295
Query: 277 EALQH 281
E ++H
Sbjct: 296 ELVEH 300
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 80/305 (26%), Positives = 137/305 (44%), Gaps = 56/305 (18%)
Query: 2 DKYSGFKELGRGAFGRVFQA----FDEH-TGEAVAIKELKQRYASWEDCLNLREVKCLRK 56
D+ + K LGRGAFG+V +A D+ T VA+K LK+ E + E+K L
Sbjct: 27 DRLNLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIH 86
Query: 57 LNHS-NIVKL-KELIQNNNRLYLVFE-CMECNLYQLMAARD----------RKLFSEPEI 103
+ H N+V L + L ++ E C NL + ++ + + +
Sbjct: 87 IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHL 146
Query: 104 KAWLFQVFQGLSYMHQNGFFHRDLKPENLLVSQ-GIIKIADFGLAREIKSGPPYTNYVGS 162
+ FQV +G+ ++ HRDL N+L+S+ ++KI DFGLAR+I P Y +
Sbjct: 147 IXYSFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKIXDFGLARDIYKDPDYVRKGDA 206
Query: 163 RW---YRAPEILLQSELYSSKADMWAMGAIMAELFTF-CPLFPGASEADQMYKICGVLGS 218
R + APE + +Y+ ++D+W+ G ++ E+F+ +PG ++ +
Sbjct: 207 RLPLKWMAPETIF-DRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFXR------- 258
Query: 219 PTMDSWADGLRQARAIKYQFPQLPRANLSALMPSASQDAISLFESLCSW--DPSKRPTAA 276
+G R RA Y P++ + L W +PS+RPT +
Sbjct: 259 ----RLKEGTRM-RAPDYTTPEMYQTMLDC------------------WHGEPSQRPTFS 295
Query: 277 EALQH 281
E ++H
Sbjct: 296 ELVEH 300
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/192 (31%), Positives = 105/192 (54%), Gaps = 11/192 (5%)
Query: 9 ELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLNLREVKCLRKLNHSNIVKLKEL 68
+LG+G FG V+ T VAIK LK S E L +E + ++K+ H +V+L +
Sbjct: 25 KLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPEAFL--QEAQVMKKIRHEKLVQLYAV 81
Query: 69 IQNNNRLYLVFECM-ECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQNGFFHRDL 127
+ + +Y+V E M + +L + K P++ Q+ G++Y+ + + HRDL
Sbjct: 82 V-SEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDL 140
Query: 128 KPENLLVSQGII-KIADFGLAREIKSGPPYTNYVGSRW---YRAPEILLQSELYSSKADM 183
+ N+LV + ++ K+ADFGLAR I+ YT G+++ + APE L ++ K+D+
Sbjct: 141 RAANILVGENLVCKVADFGLARLIEDN-EYTARQGAKFPIKWTAPEAALYGR-FTIKSDV 198
Query: 184 WAMGAIMAELFT 195
W+ G ++ EL T
Sbjct: 199 WSFGILLTELTT 210
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/192 (32%), Positives = 104/192 (54%), Gaps = 11/192 (5%)
Query: 9 ELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLNLREVKCLRKLNHSNIVKLKEL 68
+LG+G FG V+ T VAIK LK S E L +E + ++KL H +V+L +
Sbjct: 25 KLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPEAFL--QEAQVMKKLRHEKLVQLYAV 81
Query: 69 IQNNNRLYLVFECM-ECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQNGFFHRDL 127
+ + +Y+V E M + +L + K P++ Q+ G++Y+ + + HRDL
Sbjct: 82 V-SEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDL 140
Query: 128 KPENLLVSQGII-KIADFGLAREIKSGPPYTNYVGSRW---YRAPEILLQSELYSSKADM 183
N+LV + ++ K+ADFGLAR I+ YT G+++ + APE L ++ K+D+
Sbjct: 141 AAANILVGENLVCKVADFGLARLIEDN-EYTARQGAKFPIKWTAPEAALYGR-FTIKSDV 198
Query: 184 WAMGAIMAELFT 195
W+ G ++ EL T
Sbjct: 199 WSFGILLTELTT 210
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 99/208 (47%), Gaps = 26/208 (12%)
Query: 7 FKELGRGAFGRV----FQAFDEHTGEAVAIKELK-----QRYASWEDCLNLREVKCLRKL 57
++LG G FG+V + ++ TGE VA+K LK Q + W+ +E+ LR L
Sbjct: 36 IRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWK-----QEIDILRTL 90
Query: 58 NHSNIVKLKELIQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYM 117
H +I+K K ++ L L L R ++ + Q+ +G++Y+
Sbjct: 91 YHEHIIKYKGCCEDAGAASLQLVMEYVPLGSLRDYLPRHSIGLAQLLLFAQQICEGMAYL 150
Query: 118 HQNGFFHRDLKPENLLVSQG-IIKIADFGLAREIKSGPPYTNYVGSR-------WYRAPE 169
H + HRDL N+L+ ++KI DFGLA+ + G + Y WY APE
Sbjct: 151 HAQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEG--HEXYRVREDGDSPVFWY-APE 207
Query: 170 ILLQSELYSSKADMWAMGAIMAELFTFC 197
L + + Y + +D+W+ G + EL T C
Sbjct: 208 CLKEYKFYYA-SDVWSFGVTLYELLTHC 234
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/192 (32%), Positives = 103/192 (53%), Gaps = 11/192 (5%)
Query: 9 ELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLNLREVKCLRKLNHSNIVKLKEL 68
+LG+G FG V+ T VAIK LK S E L +E + ++KL H +V+L +
Sbjct: 25 KLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPEAFL--QEAQVMKKLRHEKLVQLYAV 81
Query: 69 IQNNNRLYLVFECMECN-LYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQNGFFHRDL 127
+ + +Y+V E M L + K P++ Q+ G++Y+ + + HRDL
Sbjct: 82 V-SEEPIYIVTEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDL 140
Query: 128 KPENLLVSQGII-KIADFGLAREIKSGPPYTNYVGSRW---YRAPEILLQSELYSSKADM 183
+ N+LV + ++ K+ADFGLAR I+ YT G+++ + APE L ++ K+D+
Sbjct: 141 RAANILVGENLVCKVADFGLARLIEDN-EYTARQGAKFPIKWTAPEAALYGR-FTIKSDV 198
Query: 184 WAMGAIMAELFT 195
W+ G ++ EL T
Sbjct: 199 WSFGILLTELTT 210
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 81/310 (26%), Positives = 136/310 (43%), Gaps = 68/310 (21%)
Query: 5 SGFKE---LGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLNLREVKCLRKLNHS- 60
S F+E LG+GAFG+V +A + AIK++ R+ + L EV L LNH
Sbjct: 6 SDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKI--RHTEEKLSTILSEVXLLASLNHQY 63
Query: 61 ------------NIVKLKELIQNNNRLYLVFE-CMECNLYQLMAARDRKLFSEPEIKAW- 106
N VK ++ + L++ E C LY L+ + + ++ + W
Sbjct: 64 VVRYYAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSEN---LNQQRDEYWR 120
Query: 107 LF-QVFQGLSYMHQNGFFHRDLKPENLLVSQGI-IKIADFGLAREIK------------- 151
LF Q+ + LSY+H G HR+LKP N+ + + +KI DFGLA+ +
Sbjct: 121 LFRQILEALSYIHSQGIIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNL 180
Query: 152 --SGPPYTNYVGSRWYRAPEILLQSELYSSKADMWAMGAIMAELFTFCPLFPGASEADQM 209
S T+ +G+ Y A E+L + Y+ K D +++G I F ++P ++ +++
Sbjct: 181 PGSSDNLTSAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIF-----FEXIYPFSTGXERV 235
Query: 210 YKICGVLGSPTMDSWADGLRQARAIKYQFPQLPRANLSALMPSASQDAISLFESLCSWDP 269
+ L++ R++ +FP + + I L L DP
Sbjct: 236 ----------------NILKKLRSVSIEFP----PDFDDNKXKVEKKIIRL---LIDHDP 272
Query: 270 SKRPTAAEAL 279
+KRP A L
Sbjct: 273 NKRPGARTLL 282
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 113/226 (50%), Gaps = 18/226 (7%)
Query: 2 DKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASW---EDCLNLREVKCLRKLN 58
+ Y +G G++GR + + G+ + KEL Y S E + + EV LR+L
Sbjct: 6 EDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELD--YGSMTEAEKQMLVSEVNLLRELK 63
Query: 59 HSNIVKLKELI--QNNNRLYLVFE-CMECNLYQLMA--ARDRKLFSEPEIKAWLFQVFQG 113
H NIV+ + I + N LY+V E C +L ++ ++R+ E + + Q+
Sbjct: 64 HPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLA 123
Query: 114 LSYMHQ-----NGFFHRDLKPENLLVS-QGIIKIADFGLAREIKSGPPYT-NYVGSRWYR 166
L H+ + HRDLKP N+ + + +K+ DFGLAR + + +VG+ +Y
Sbjct: 124 LKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKTFVGTPYYM 183
Query: 167 APEILLQSELYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKI 212
+PE + + Y+ K+D+W++G ++ EL P F S+ + KI
Sbjct: 184 SPEQMNRMS-YNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKI 228
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 101/198 (51%), Gaps = 13/198 (6%)
Query: 10 LGRGAFGRVFQAFDEHTGE---AVAIKELKQRYASWEDCLNLREVKCLRKLNHSNIVKLK 66
+G G FG V + + G+ VAIK LK Y + L E + + H NI++L+
Sbjct: 22 IGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIRLE 81
Query: 67 ELIQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQNGFFHRD 126
++ N+ + ++ E ME + F+ ++ L + G+ Y+ + + HRD
Sbjct: 82 GVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGMLRGIASGMRYLAEMSYVHRD 141
Query: 127 LKPENLLVSQGII-KIADFGLAR---EIKSGPPYTNYVGS----RWYRAPEILLQSELYS 178
L N+LV+ ++ K++DFGL+R E S P YT+ +G RW APE + + ++
Sbjct: 142 LAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSLGGKIPIRW-TAPEAIAFRK-FT 199
Query: 179 SKADMWAMGAIMAELFTF 196
S +D W+ G +M E+ +F
Sbjct: 200 SASDAWSYGIVMWEVMSF 217
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 103/205 (50%), Gaps = 24/205 (11%)
Query: 8 KELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLNLREVK-------CLRKLNHS 60
+ LG G+FGRV H G A+K LK+ E + L++V+ L + H
Sbjct: 12 RTLGTGSFGRVHLIRSRHNGRYYAMKVLKK-----EIVVRLKQVEHTNDERLMLSIVTHP 66
Query: 61 NIVKLKELIQNNNRLYLVFECMEC-NLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQ 119
I+++ Q+ +++++ + +E L+ L+ R F P K + +V L Y+H
Sbjct: 67 FIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQR--FPNPVAKFYAAEVCLALEYLHS 124
Query: 120 NGFFHRDLKPENLLVSQ-GIIKIADFGLAREIKSGPPYTNYV--GSRWYRAPEILLQSEL 176
+RDLKPEN+L+ + G IKI DFG A+ + P Y G+ Y APE+ + ++
Sbjct: 125 KDIIYRDLKPENILLDKNGHIKITDFGFAKYV----PDVTYXLCGTPDYIAPEV-VSTKP 179
Query: 177 YSSKADMWAMGAIMAELFT-FCPLF 200
Y+ D W+ G ++ E+ + P +
Sbjct: 180 YNKSIDWWSFGILIYEMLAGYTPFY 204
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 113/226 (50%), Gaps = 18/226 (7%)
Query: 2 DKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASW---EDCLNLREVKCLRKLN 58
+ Y +G G++GR + + G+ + KEL Y S E + + EV LR+L
Sbjct: 6 EDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELD--YGSMTEAEKQMLVSEVNLLRELK 63
Query: 59 HSNIVKLKELI--QNNNRLYLVFE-CMECNLYQLM--AARDRKLFSEPEIKAWLFQVFQG 113
H NIV+ + I + N LY+V E C +L ++ ++R+ E + + Q+
Sbjct: 64 HPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLA 123
Query: 114 LSYMHQ-----NGFFHRDLKPENLLVS-QGIIKIADFGLAREIKSGPPYTN-YVGSRWYR 166
L H+ + HRDLKP N+ + + +K+ DFGLAR + + +VG+ +Y
Sbjct: 124 LKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKAFVGTPYYM 183
Query: 167 APEILLQSELYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKI 212
+PE + + Y+ K+D+W++G ++ EL P F S+ + KI
Sbjct: 184 SPEQMNRMS-YNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKI 228
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/236 (28%), Positives = 114/236 (48%), Gaps = 38/236 (16%)
Query: 10 LGRGAFGRVFQAFDEHTGEAVAIKELK--QRYASWEDCLNLREVKCLRKLNHSNIVK--- 64
LGRG FG VF+A ++ AIK ++ R + E + REVK L KL H IV+
Sbjct: 13 LGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVM--REVKALAKLEHPGIVRYFN 70
Query: 65 -------LKELIQNNNRLYLVFE---CMECNLYQLMAARDRKLFSEPEIKAWLF-QVFQG 113
++L ++ ++YL + C + NL M R E + +F Q+ +
Sbjct: 71 AWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEA 130
Query: 114 LSYMHQNGFFHRDLKPENLLVS-QGIIKIADFGLAREIKSG----------PPY---TNY 159
+ ++H G HRDLKP N+ + ++K+ DFGL + P Y T
Sbjct: 131 VEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYARHTGQ 190
Query: 160 VGSRWYRAPEILLQSELYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGV 215
VG++ Y +PE + YS K D++++G I+ EL L+P +++ +++ + V
Sbjct: 191 VGTKLYMSPE-QIHGNSYSHKVDIFSLGLILFEL-----LYPFSTQMERVRTLTDV 240
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/192 (31%), Positives = 105/192 (54%), Gaps = 11/192 (5%)
Query: 9 ELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLNLREVKCLRKLNHSNIVKLKEL 68
+LG+G FG V+ T VAIK LK S E L +E + ++KL H +V+L +
Sbjct: 22 KLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPEAFL--QEAQVMKKLRHEKLVQLYAV 78
Query: 69 IQNNNRLYLVFECM-ECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQNGFFHRDL 127
+ + +Y+V E M + +L + K P++ Q+ G++Y+ + + HRDL
Sbjct: 79 V-SEEPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVERMNYVHRDL 137
Query: 128 KPENLLVSQGII-KIADFGLAREIKSGPPYTNYVGSRW---YRAPEILLQSELYSSKADM 183
+ N+LV + ++ K+ADFGLAR I+ +T G+++ + APE L ++ K+D+
Sbjct: 138 RAANILVGENLVCKVADFGLARLIEDN-EWTARQGAKFPIKWTAPEAALYGR-FTIKSDV 195
Query: 184 WAMGAIMAELFT 195
W+ G ++ EL T
Sbjct: 196 WSFGILLTELTT 207
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 113/226 (50%), Gaps = 18/226 (7%)
Query: 2 DKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASW---EDCLNLREVKCLRKLN 58
+ Y +G G++GR + + G+ + KEL Y S E + + EV LR+L
Sbjct: 6 EDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELD--YGSMTEAEKQMLVSEVNLLRELK 63
Query: 59 HSNIVKLKELI--QNNNRLYLVFE-CMECNLYQLM--AARDRKLFSEPEIKAWLFQVFQG 113
H NIV+ + I + N LY+V E C +L ++ ++R+ E + + Q+
Sbjct: 64 HPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLA 123
Query: 114 LSYMHQ-----NGFFHRDLKPENLLVS-QGIIKIADFGLAREIKSGPPYTN-YVGSRWYR 166
L H+ + HRDLKP N+ + + +K+ DFGLAR + + +VG+ +Y
Sbjct: 124 LKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDEDFAKEFVGTPYYM 183
Query: 167 APEILLQSELYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKI 212
+PE + + Y+ K+D+W++G ++ EL P F S+ + KI
Sbjct: 184 SPEQMNRMS-YNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKI 228
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 101/198 (51%), Gaps = 13/198 (6%)
Query: 10 LGRGAFGRVFQAFDEHTGEA---VAIKELKQRYASWEDCLNLREVKCLRKLNHSNIVKLK 66
+G G FG V + G+ VAIK LK Y + L E + + +H N++ L+
Sbjct: 41 IGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLE 100
Query: 67 ELIQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQNGFFHRD 126
++ + + ++ E ME ++ F+ ++ L + G+ Y+ + HRD
Sbjct: 101 GVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLADMNYVHRD 160
Query: 127 LKPENLLVSQGII-KIADFGLAREIK---SGPPYTNYVGS----RWYRAPEILLQSELYS 178
L N+LV+ ++ K++DFGL+R ++ S P YT+ +G RW APE +Q ++
Sbjct: 161 LAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRW-TAPE-AIQYRKFT 218
Query: 179 SKADMWAMGAIMAELFTF 196
S +D+W+ G +M E+ ++
Sbjct: 219 SASDVWSYGIVMWEVMSY 236
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/192 (31%), Positives = 104/192 (54%), Gaps = 11/192 (5%)
Query: 9 ELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLNLREVKCLRKLNHSNIVKLKEL 68
+LG+G FG V+ T VAIK LK S E L +E + ++KL H +V+L +
Sbjct: 192 KLGQGCFGEVWMGTWNGTTR-VAIKTLKPGNMSPEAFL--QEAQVMKKLRHEKLVQLYAV 248
Query: 69 IQNNNRLYLVFECM-ECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQNGFFHRDL 127
+ + +Y+V E M + +L + K P++ Q+ G++Y+ + + HRDL
Sbjct: 249 V-SEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDL 307
Query: 128 KPENLLVSQGII-KIADFGLAREIKSGPPYTNYVGSRW---YRAPEILLQSELYSSKADM 183
+ N+LV + ++ K+ADFGL R I+ YT G+++ + APE L ++ K+D+
Sbjct: 308 RAANILVGENLVCKVADFGLGRLIEDN-EYTARQGAKFPIKWTAPEAALYGR-FTIKSDV 365
Query: 184 WAMGAIMAELFT 195
W+ G ++ EL T
Sbjct: 366 WSFGILLTELTT 377
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 99/210 (47%), Gaps = 29/210 (13%)
Query: 7 FKELGRGAFGRV----FQAFDEHTGEAVAIKELKQRYASWEDCLNLREVKCLRKLNHSNI 62
+LG+G FG V + ++TG VA+K+L+ + RE++ L+ L+ I
Sbjct: 12 ISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQ-REIQILKALHSDFI 70
Query: 63 VKLKELIQNNNR--LYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQN 120
VK + + R L LV E + + R R + + Q+ +G+ Y+
Sbjct: 71 VKYRGVSYGPGRPELRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSR 130
Query: 121 GFFHRDLKPENLLV-SQGIIKIADFGLA------------REIKSGPPYTNYVGSRWYRA 167
HRDL N+LV S+ +KIADFGLA RE P + WY A
Sbjct: 131 RCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDXXVVREPGQSPIF-------WY-A 182
Query: 168 PEILLQSELYSSKADMWAMGAIMAELFTFC 197
PE L ++S ++D+W+ G ++ ELFT+C
Sbjct: 183 PESL-SDNIFSRQSDVWSFGVVLYELFTYC 211
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 112/206 (54%), Gaps = 23/206 (11%)
Query: 7 FKELGRGAFGRV----FQAFDEHTGEAVAIKELKQRYASWEDCLNL-REVKCLRKLNHSN 61
++LG+G FG V + ++TGE VA+K+L+ +++ E + RE++ L+ L H N
Sbjct: 18 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ--HSTEEHLRDFEREIEILKSLQHDN 75
Query: 62 IVKLKELIQNNNR--LYLVFECMEC-NLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMH 118
IVK K + + R L L+ E + +L + A ++ ++ + Q+ +G+ Y+
Sbjct: 76 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQAHAERI-DHIKLLQYTSQICKGMEYLG 134
Query: 119 QNGFFHRDLKPENLLV-SQGIIKIADFGLAREI-------KSGPPYTNYVGSRWYRAPEI 170
+ HRDL N+LV ++ +KI DFGL + + K P + + WY APE
Sbjct: 135 TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIF--WY-APES 191
Query: 171 LLQSELYSSKADMWAMGAIMAELFTF 196
L +S+ +S +D+W+ G ++ ELFT+
Sbjct: 192 LTESK-FSVASDVWSFGVVLYELFTY 216
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 75/298 (25%), Positives = 129/298 (43%), Gaps = 49/298 (16%)
Query: 2 DKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLNLREVKCLRKLNHSN 61
D Y + +G G++ + + T A+K + + + + + LR H N
Sbjct: 27 DGYVVKETIGVGSYSECKRCVHKATNMEYAVKVIDKSKRDPSEEIEI----LLRYGQHPN 82
Query: 62 IVKLKELIQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQNG 121
I+ LK++ + +YLV E M R +K FSE E L + + + Y+H G
Sbjct: 83 IITLKDVYDDGKHVYLVTELMRGGELLDKILR-QKFFSEREASFVLHTIGKTVEYLHSQG 141
Query: 122 FFHRDLKPENLLV-----SQGIIKIADFGLAREIKS------GPPYT-NYVGSRWYRAPE 169
HRDLKP N+L + ++I DFG A+++++ P YT N+V APE
Sbjct: 142 VVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPCYTANFV------APE 195
Query: 170 ILLQSELYSSKADMWAMGAIMAELFT-FCPLFPGASEADQMYKICGVLGSPTMDSWADGL 228
+ L+ + Y D+W++G ++ + + P G S+ + +I +GS
Sbjct: 196 V-LKRQGYDEGCDIWSLGILLYTMLAGYTPFANGPSDTPE--EILTRIGSGKF------- 245
Query: 229 RQARAIKYQFPQLPRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFFKR 286
L N + + S+ A L + DP +R TA + LQHP+ +
Sbjct: 246 -----------TLSGGNWN----TVSETAKDLVSKMLHVDPHQRLTAKQVLQHPWVTQ 288
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 78/293 (26%), Positives = 126/293 (43%), Gaps = 39/293 (13%)
Query: 2 DKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLNLREVKC-LRKLNHS 60
D ELGRGA+G V + +G+ +A+K ++ S E L ++ +R ++
Sbjct: 7 DDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCP 66
Query: 61 NIVKLKELIQNNNRLYLVFECMECNLYQLMAARDRKLFSEPE--IKAWLFQVFQGLSYMH 118
V + +++ E M+ +L + K + PE + + + L ++H
Sbjct: 67 FTVTFYGALFREGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLH 126
Query: 119 QN-GFFHRDLKPENLLVSQ-GIIKIADFGLAREIKSGPPYTNYVGSRWYRAPEIL---LQ 173
HRD+KP N+L++ G +K+ DFG++ + G + Y APE + L
Sbjct: 127 SKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDDVAKDIDAGCKPYMAPERINPELN 186
Query: 174 SELYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQAR- 232
+ YS K+D+W++G M EL +L P DSW +Q +
Sbjct: 187 QKGYSVKSDIWSLGITMIEL--------------------AILRFP-YDSWGTPFQQLKQ 225
Query: 233 AIKYQFPQLPRANLSALMPSASQDAISLFESLCSWDPSK-RPTAAEALQHPFF 284
++ PQLP SA F S C SK RPT E +QHPFF
Sbjct: 226 VVEEPSPQLPADKFSAEFVD--------FTSQCLKKNSKERPTYPELMQHPFF 270
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 69/223 (30%), Positives = 113/223 (50%), Gaps = 30/223 (13%)
Query: 2 DKYSGFKELGRGAFGRVFQA----FDEHTGE---AVAIKELKQRYASWEDCLNL-REVKC 53
DK + K LG GAFG+V A D+ + VA+K LK A+ +D +L E++
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDD-ATEKDLSDLVSEMEM 93
Query: 54 LRKLN-HSNIVKLKELIQNNNRLYLVFE-CMECNLYQLMAAR---------DRKLFSEPE 102
++ + H NI+ L + LY++ E + NL + + AR D E +
Sbjct: 94 MKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQ 153
Query: 103 IK-----AWLFQVFQGLSYMHQNGFFHRDLKPENLLVSQG-IIKIADFGLAREIKSGPPY 156
+ + +Q+ +G+ Y+ HRDL N+LV++ ++KIADFGLAR+I + Y
Sbjct: 154 MTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYY 213
Query: 157 TNYVGSRW---YRAPEILLQSELYSSKADMWAMGAIMAELFTF 196
N R + APE L +Y+ ++D+W+ G +M E+FT
Sbjct: 214 KNTTNGRLPVKWMAPEALF-DRVYTHQSDVWSFGVLMWEIFTL 255
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/192 (31%), Positives = 104/192 (54%), Gaps = 11/192 (5%)
Query: 9 ELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLNLREVKCLRKLNHSNIVKLKEL 68
+LG+G FG V+ T VAIK LK S E L +E + ++KL H +V+L +
Sbjct: 25 KLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPEAFL--QEAQVMKKLRHEKLVQLYAV 81
Query: 69 IQNNNRLYLVFECM-ECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQNGFFHRDL 127
+ + +Y+V E M + +L + K P++ Q+ G++Y+ + + HRDL
Sbjct: 82 V-SEEPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDL 140
Query: 128 KPENLLVSQGII-KIADFGLAREIKSGPPYTNYVGSRW---YRAPEILLQSELYSSKADM 183
+ N+LV + ++ K+ADFGLAR I+ T G+++ + APE L ++ K+D+
Sbjct: 141 RAANILVGENLVCKVADFGLARLIEDN-EXTARQGAKFPIKWTAPEAALYGR-FTIKSDV 198
Query: 184 WAMGAIMAELFT 195
W+ G ++ EL T
Sbjct: 199 WSFGILLTELTT 210
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 80/289 (27%), Positives = 130/289 (44%), Gaps = 38/289 (13%)
Query: 1 MDKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLN--LREVKCLRKLN 58
+D + + LG+G FG V+ A ++ + VA+K L + E + RE++ L+
Sbjct: 22 IDDFEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLH 81
Query: 59 HSNIVKLKELIQNNNRLYLVFE-CMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYM 117
H NI++L + R+YL+ E LY+ + + F E + ++ L Y
Sbjct: 82 HPNILRLYNYFYDRRRIYLILEYAPRGELYKEL--QKSCTFDEQRTATIMEELADALMYC 139
Query: 118 HQNGFFHRDLKPEN-LLVSQGIIKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQSEL 176
H HRD+KPEN LL +G +KIADFG + S T G+ Y PE +++ +
Sbjct: 140 HGKKVIHRDIKPENLLLGLKGELKIADFGWSVHAPSLRRKT-MCGTLDYLPPE-MIEGRM 197
Query: 177 YSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQARAIKY 236
++ K D+W +G + EL P F AS + +I V
Sbjct: 198 HNEKVDLWCIGVLCYELLVGNPPFESASHNETYRRIVKV-------------------DL 238
Query: 237 QFPQLPRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFFK 285
+FP A +P+ +QD IS L +PS+R A+ HP+ +
Sbjct: 239 KFP--------ASVPTGAQDLIS---KLLRHNPSERLPLAQVSAHPWVR 276
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 75/298 (25%), Positives = 129/298 (43%), Gaps = 49/298 (16%)
Query: 2 DKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLNLREVKCLRKLNHSN 61
D Y + +G G++ + + T A+K + + + + + LR H N
Sbjct: 27 DGYVVKETIGVGSYSECKRCVHKATNMEYAVKVIDKSKRDPSEEIEI----LLRYGQHPN 82
Query: 62 IVKLKELIQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQNG 121
I+ LK++ + +YLV E M R +K FSE E L + + + Y+H G
Sbjct: 83 IITLKDVYDDGKHVYLVTELMRGGELLDKILR-QKFFSEREASFVLHTIGKTVEYLHSQG 141
Query: 122 FFHRDLKPENLLV-----SQGIIKIADFGLAREIKS------GPPYT-NYVGSRWYRAPE 169
HRDLKP N+L + ++I DFG A+++++ P YT N+V APE
Sbjct: 142 VVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPCYTANFV------APE 195
Query: 170 ILLQSELYSSKADMWAMGAIMAELFT-FCPLFPGASEADQMYKICGVLGSPTMDSWADGL 228
+ L+ + Y D+W++G ++ + + P G S+ + +I +GS
Sbjct: 196 V-LKRQGYDEGCDIWSLGILLYTMLAGYTPFANGPSDTPE--EILTRIGSGKF------- 245
Query: 229 RQARAIKYQFPQLPRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFFKR 286
L N + + S+ A L + DP +R TA + LQHP+ +
Sbjct: 246 -----------TLSGGNWN----TVSETAKDLVSKMLHVDPHQRLTAKQVLQHPWVTQ 288
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 82/309 (26%), Positives = 136/309 (44%), Gaps = 60/309 (19%)
Query: 2 DKYSGFKELGRGAFGRVFQA----FDEH-TGEAVAIKELKQRYASWEDCLNLREVKCLRK 56
D+ K LGRGAFG+V +A D+ T VA+K LK+ E + E+K L
Sbjct: 29 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 88
Query: 57 LNHS-NIVKL-KELIQNNNRLYLVFE-CMECNLYQLMAARDRKLFSEPE----------- 102
+ H N+V L + L ++ E C NL + ++ + E
Sbjct: 89 IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEAPEDLYKDFLT 148
Query: 103 ---IKAWLFQVFQGLSYMHQNGFFHRDLKPENLLVSQ-GIIKIADFGLAREIKSGPPYTN 158
+ + FQV +G+ ++ HRDL N+L+S+ ++KI DFGLAR+I P Y
Sbjct: 149 LEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVR 208
Query: 159 YVGSRW---YRAPEILLQSELYSSKADMWAMGAIMAELFTF-CPLFPGASEADQMYKICG 214
+R + APE + +Y+ ++D+W+ G ++ E+F+ +PG ++ C
Sbjct: 209 KGDARLPLKWMAPETIF-DRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE---FCR 264
Query: 215 VLGSPTMDSWADGLRQARAIKYQFPQLPRANLSALMPSASQDAISLFESLCSW--DPSKR 272
L T + RA Y P++ + L W +PS+R
Sbjct: 265 RLKEGT---------RMRAPDYTTPEMYQTMLDC------------------WHGEPSQR 297
Query: 273 PTAAEALQH 281
PT +E ++H
Sbjct: 298 PTFSELVEH 306
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 81/309 (26%), Positives = 136/309 (44%), Gaps = 60/309 (19%)
Query: 2 DKYSGFKELGRGAFGRVFQA----FDEH-TGEAVAIKELKQRYASWEDCLNLREVKCLRK 56
D+ K LGRGAFG+V +A D+ T VA+K LK+ E + E+K L
Sbjct: 27 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 86
Query: 57 LNHS-NIVKL-KELIQNNNRLYLVFE-CMECNLYQLMAARD--------------RKLFS 99
+ H N+V L + L ++ E C NL + ++ + +
Sbjct: 87 IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLT 146
Query: 100 EPEIKAWLFQVFQGLSYMHQNGFFHRDLKPENLLVSQ-GIIKIADFGLAREIKSGPPYTN 158
+ + FQV +G+ ++ HRDL N+L+S+ ++KI DFGLAR+I P Y
Sbjct: 147 LEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVR 206
Query: 159 YVGSRW---YRAPEILLQSELYSSKADMWAMGAIMAELFTF-CPLFPGASEADQMYKICG 214
+R + APE + +Y+ ++D+W+ G ++ E+F+ +PG ++ C
Sbjct: 207 KGDARLPLKWMAPETIF-DRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEF---CR 262
Query: 215 VLGSPTMDSWADGLRQARAIKYQFPQLPRANLSALMPSASQDAISLFESLCSW--DPSKR 272
L T + RA Y P++ + L W +PS+R
Sbjct: 263 RLKEGT---------RMRAPDYTTPEMYQTMLDC------------------WHGEPSQR 295
Query: 273 PTAAEALQH 281
PT +E ++H
Sbjct: 296 PTFSELVEH 304
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 84/307 (27%), Positives = 138/307 (44%), Gaps = 58/307 (18%)
Query: 2 DKYSGFKELGRGAFGRVFQA----FDEH-TGEAVAIKELKQRYASWEDCLNLREVKCLRK 56
D+ K LGRGAFG+V +A D+ T VA+K LK+ E + E+K L
Sbjct: 29 DRLKLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIH 88
Query: 57 LNHS-NIVKL-KELIQNNNRLYLVFE-CMECNLYQ-LMAARDRKLFSEPE---------- 102
+ H N+V L + L ++ E C NL L + R+ + +PE
Sbjct: 89 IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYKDFLTLE 148
Query: 103 -IKAWLFQVFQGLSYMHQNGFFHRDLKPENLLVSQ-GIIKIADFGLAREIKSGPPYTNYV 160
+ + FQV +G+ ++ HRDL N+L+S+ ++KI DFGLAR+I P
Sbjct: 149 HLIXYSFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKG 208
Query: 161 GSRW---YRAPEILLQSELYSSKADMWAMGAIMAELFTF-CPLFPGASEADQMYKICGVL 216
+R + APE + +Y+ ++D+W+ G ++ E+F+ +PG ++ C L
Sbjct: 209 DARLPLKWMAPETIF-DRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE---FCRRL 264
Query: 217 GSPTMDSWADGLRQARAIKYQFPQLPRANLSALMPSASQDAISLFESLCSW--DPSKRPT 274
T + RA Y P++ + L W +PS+RPT
Sbjct: 265 KEGT---------RMRAPDYTTPEMYQTMLDC------------------WHGEPSQRPT 297
Query: 275 AAEALQH 281
+E ++H
Sbjct: 298 FSELVEH 304
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 109/224 (48%), Gaps = 39/224 (17%)
Query: 8 KELGRGAFGRVFQA-------FDEHTGEAVAIKELKQRYASWEDCLNLREVKCLRKLNHS 60
+++G GAFGRVFQA ++ T VA+K LK+ ++ RE + + ++
Sbjct: 53 RDIGEGAFGRVFQARAPGLLPYEPFT--MVAVKMLKEEASADMQADFQREAALMAEFDNP 110
Query: 61 NIVKLKELIQNNNRLYLVFECME----------------CNL-YQLMAARDRKLFSEP-- 101
NIVKL + + L+FE M C+L + ++ R R P
Sbjct: 111 NIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPP 170
Query: 102 ----EIKAWLFQVFQGLSYMHQNGFFHRDLKPENLLVSQG-IIKIADFGLAREIKSGPPY 156
E QV G++Y+ + F HRDL N LV + ++KIADFGL+R I S Y
Sbjct: 171 LSCAEQLCIARQVAAGMAYLSERKFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYY 230
Query: 157 ----TNYVGSRWYRAPEILLQSELYSSKADMWAMGAIMAELFTF 196
+ + RW PE + + Y++++D+WA G ++ E+F++
Sbjct: 231 KADGNDAIPIRW-MPPESIFYNR-YTTESDVWAYGVVLWEIFSY 272
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 81/309 (26%), Positives = 136/309 (44%), Gaps = 60/309 (19%)
Query: 2 DKYSGFKELGRGAFGRVFQA----FDEH-TGEAVAIKELKQRYASWEDCLNLREVKCLRK 56
D+ K LGRGAFG+V +A D+ T VA+K LK+ E + E+K L
Sbjct: 64 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 123
Query: 57 LNHS-NIVKL-KELIQNNNRLYLVFE-CMECNLYQLMAARD--------------RKLFS 99
+ H N+V L + L ++ E C NL + ++ + +
Sbjct: 124 IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLT 183
Query: 100 EPEIKAWLFQVFQGLSYMHQNGFFHRDLKPENLLVSQ-GIIKIADFGLAREIKSGPPYTN 158
+ + FQV +G+ ++ HRDL N+L+S+ ++KI DFGLAR+I P Y
Sbjct: 184 LEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVR 243
Query: 159 YVGSRW---YRAPEILLQSELYSSKADMWAMGAIMAELFTF-CPLFPGASEADQMYKICG 214
+R + APE + +Y+ ++D+W+ G ++ E+F+ +PG ++ C
Sbjct: 244 KGDARLPLKWMAPETIF-DRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEF---CR 299
Query: 215 VLGSPTMDSWADGLRQARAIKYQFPQLPRANLSALMPSASQDAISLFESLCSW--DPSKR 272
L T + RA Y P++ + L W +PS+R
Sbjct: 300 RLKEGT---------RMRAPDYTTPEMYQTMLDC------------------WHGEPSQR 332
Query: 273 PTAAEALQH 281
PT +E ++H
Sbjct: 333 PTFSELVEH 341
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 69/223 (30%), Positives = 112/223 (50%), Gaps = 30/223 (13%)
Query: 2 DKYSGFKELGRGAFGRVFQA----FDEHTGE---AVAIKELKQRYASWEDCLNL-REVKC 53
DK + K LG GAFG+V A D+ + VA+K LK A+ ED +L E++
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDD-ATEEDLSDLVSEMEM 93
Query: 54 LRKLN-HSNIVKLKELIQNNNRLYLVFE-CMECNLYQLMAAR---------DRKLFSEPE 102
++ + H NI+ L + LY++ E + NL + + AR D E +
Sbjct: 94 MKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQ 153
Query: 103 IK-----AWLFQVFQGLSYMHQNGFFHRDLKPENLLVSQG-IIKIADFGLAREIKSGPPY 156
+ + +Q+ +G+ Y+ HRDL N+LV++ ++KIADFGLAR+I + Y
Sbjct: 154 MTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYY 213
Query: 157 TNYVGSRW---YRAPEILLQSELYSSKADMWAMGAIMAELFTF 196
R + APE L +Y+ ++D+W+ G +M E+FT
Sbjct: 214 KKTTNGRLPVKWMAPEALF-DRVYTHQSDVWSFGVLMWEIFTL 255
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 103/200 (51%), Gaps = 8/200 (4%)
Query: 1 MDKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWE--DCLNLREVKCLRKLN 58
M+ +S + +GRG FG V+ TG+ A+K L ++ + + L L E L ++
Sbjct: 188 MNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVS 247
Query: 59 HSN---IVKLKELIQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLS 115
+ IV + ++L + + M ++ +FSE +++ + ++ GL
Sbjct: 248 TGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQ-HGVFSEADMRFYAAEIILGLE 306
Query: 116 YMHQNGFFHRDLKPENLLVSQ-GIIKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQS 174
+MH +RDLKP N+L+ + G ++I+D GLA + P+ + VG+ Y APE+L +
Sbjct: 307 HMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS-VGTHGYMAPEVLQKG 365
Query: 175 ELYSSKADMWAMGAIMAELF 194
Y S AD +++G ++ +L
Sbjct: 366 VAYDSSADWFSLGCMLFKLL 385
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 103/200 (51%), Gaps = 8/200 (4%)
Query: 1 MDKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWE--DCLNLREVKCLRKLN 58
M+ +S + +GRG FG V+ TG+ A+K L ++ + + L L E L ++
Sbjct: 188 MNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVS 247
Query: 59 HSN---IVKLKELIQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLS 115
+ IV + ++L + + M ++ +FSE +++ + ++ GL
Sbjct: 248 TGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQ-HGVFSEADMRFYAAEIILGLE 306
Query: 116 YMHQNGFFHRDLKPENLLVSQ-GIIKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQS 174
+MH +RDLKP N+L+ + G ++I+D GLA + P+ + VG+ Y APE+L +
Sbjct: 307 HMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS-VGTHGYMAPEVLQKG 365
Query: 175 ELYSSKADMWAMGAIMAELF 194
Y S AD +++G ++ +L
Sbjct: 366 VAYDSSADWFSLGCMLFKLL 385
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 103/200 (51%), Gaps = 8/200 (4%)
Query: 1 MDKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWE--DCLNLREVKCLRKLN 58
M+ +S + +GRG FG V+ TG+ A+K L ++ + + L L E L ++
Sbjct: 187 MNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVS 246
Query: 59 HSN---IVKLKELIQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLS 115
+ IV + ++L + + M ++ +FSE +++ + ++ GL
Sbjct: 247 TGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQ-HGVFSEADMRFYAAEIILGLE 305
Query: 116 YMHQNGFFHRDLKPENLLVSQ-GIIKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQS 174
+MH +RDLKP N+L+ + G ++I+D GLA + P+ + VG+ Y APE+L +
Sbjct: 306 HMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS-VGTHGYMAPEVLQKG 364
Query: 175 ELYSSKADMWAMGAIMAELF 194
Y S AD +++G ++ +L
Sbjct: 365 VAYDSSADWFSLGCMLFKLL 384
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 103/200 (51%), Gaps = 8/200 (4%)
Query: 1 MDKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWE--DCLNLREVKCLRKLN 58
M+ +S + +GRG FG V+ TG+ A+K L ++ + + L L E L ++
Sbjct: 188 MNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVS 247
Query: 59 HSN---IVKLKELIQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLS 115
+ IV + ++L + + M ++ +FSE +++ + ++ GL
Sbjct: 248 TGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQ-HGVFSEADMRFYAAEIILGLE 306
Query: 116 YMHQNGFFHRDLKPENLLVSQ-GIIKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQS 174
+MH +RDLKP N+L+ + G ++I+D GLA + P+ + VG+ Y APE+L +
Sbjct: 307 HMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS-VGTHGYMAPEVLQKG 365
Query: 175 ELYSSKADMWAMGAIMAELF 194
Y S AD +++G ++ +L
Sbjct: 366 VAYDSSADWFSLGCMLFKLL 385
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 76/302 (25%), Positives = 138/302 (45%), Gaps = 54/302 (17%)
Query: 4 YSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLNLR-EVKCLRKLN-HSN 61
YS K++G G +VFQ +E + AIK + A + + R E+ L KL HS+
Sbjct: 58 YSILKQIGSGGSSKVFQVLNEKK-QIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSD 116
Query: 62 -IVKLKELIQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQN 120
I++L + + +Y+V EC +L + + +K E K++ + + + +HQ+
Sbjct: 117 KIIRLYDYEITDQYIYMVMECGNIDLNSWL--KKKKSIDPWERKSYWKNMLEAVHTIHQH 174
Query: 121 GFFHRDLKPENLLVSQGIIKIADFGLAREIKSGPPYTNY-----VGSRWYRAPEILLQSE 175
G H DLKP N L+ G++K+ DFG+A +++ P T+ VG+ Y PE + +
Sbjct: 175 GIVHSDLKPANFLIVDGMLKLIDFGIANQMQ--PDTTSVVKDSQVGTVNYMPPEAI--KD 230
Query: 176 LYSSK------------ADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDS 223
+ SS+ +D+W++G I+ + P +Q+ K+ ++ P +
Sbjct: 231 MSSSRENGKSKSKISPKSDVWSLGCIL--YYMTYGKTPFQQIINQISKLHAII-DPNHE- 286
Query: 224 WADGLRQARAIKYQFPQLPRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPF 283
+FP +P +L QD + + DP +R + E L HP+
Sbjct: 287 ------------IEFPDIPEKDL--------QD---VLKCCLKRDPKQRISIPELLAHPY 323
Query: 284 FK 285
+
Sbjct: 324 VQ 325
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 82/308 (26%), Positives = 138/308 (44%), Gaps = 59/308 (19%)
Query: 2 DKYSGFKELGRGAFGRVFQA----FDEH-TGEAVAIKELKQRYASWEDCLNLREVKCLRK 56
D+ + K LGRGAFG+V +A D+ T VA+K LK+ E + E+K L
Sbjct: 28 DRLNLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 87
Query: 57 LNHS-NIVKL-KELIQNNNRLYLVFE-CMECNLYQLMAARDRKL--FSEPE--------- 102
+ H N+V L + L ++ E C NL + ++ + + PE
Sbjct: 88 IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTPEDLYKDFLTL 147
Query: 103 --IKAWLFQVFQGLSYMHQNGFFHRDLKPENLLVSQ-GIIKIADFGLAREIKSGPPYTNY 159
+ + FQV +G+ ++ HRDL N+L+S+ ++KI DFGLAR+I P
Sbjct: 148 EHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRK 207
Query: 160 VGSRW---YRAPEILLQSELYSSKADMWAMGAIMAELFTF-CPLFPGASEADQMYKICGV 215
+R + APE + +Y+ ++D+W+ G ++ E+F+ +PG ++ C
Sbjct: 208 GDARLPLKWMAPETIF-DRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE---FCRR 263
Query: 216 LGSPTMDSWADGLRQARAIKYQFPQLPRANLSALMPSASQDAISLFESLCSW--DPSKRP 273
L T + RA Y P++ + L W +PS+RP
Sbjct: 264 LKEGT---------RMRAPDYTTPEMYQTMLDC------------------WHGEPSQRP 296
Query: 274 TAAEALQH 281
T +E ++H
Sbjct: 297 TFSELVEH 304
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 76/302 (25%), Positives = 138/302 (45%), Gaps = 54/302 (17%)
Query: 4 YSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLNLR-EVKCLRKLN-HSN 61
YS K++G G +VFQ +E + AIK + A + + R E+ L KL HS+
Sbjct: 58 YSILKQIGSGGSSKVFQVLNEKK-QIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSD 116
Query: 62 -IVKLKELIQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQN 120
I++L + + +Y+V EC +L + + +K E K++ + + + +HQ+
Sbjct: 117 KIIRLYDYEITDQYIYMVMECGNIDLNSWL--KKKKSIDPWERKSYWKNMLEAVHTIHQH 174
Query: 121 GFFHRDLKPENLLVSQGIIKIADFGLAREIKSGPPYTNY-----VGSRWYRAPEILLQSE 175
G H DLKP N L+ G++K+ DFG+A +++ P T+ VG+ Y PE + +
Sbjct: 175 GIVHSDLKPANFLIVDGMLKLIDFGIANQMQ--PDTTSVVKDSQVGTVNYMPPEAI--KD 230
Query: 176 LYSSK------------ADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDS 223
+ SS+ +D+W++G I+ + P +Q+ K+ ++ P +
Sbjct: 231 MSSSRENGKSKSKISPKSDVWSLGCIL--YYMTYGKTPFQQIINQISKLHAII-DPNHE- 286
Query: 224 WADGLRQARAIKYQFPQLPRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPF 283
+FP +P +L QD + + DP +R + E L HP+
Sbjct: 287 ------------IEFPDIPEKDL--------QD---VLKCCLKRDPKQRISIPELLAHPY 323
Query: 284 FK 285
+
Sbjct: 324 VQ 325
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 81/309 (26%), Positives = 136/309 (44%), Gaps = 60/309 (19%)
Query: 2 DKYSGFKELGRGAFGRVFQA----FDEH-TGEAVAIKELKQRYASWEDCLNLREVKCLRK 56
D+ K LGRGAFG+V +A D+ T VA+K LK+ E + E+K L
Sbjct: 18 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 77
Query: 57 LNHS-NIVKL-KELIQNNNRLYLVFE-CMECNLYQLMAARD--------------RKLFS 99
+ H N+V L + L ++ E C NL + ++ + +
Sbjct: 78 IGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLT 137
Query: 100 EPEIKAWLFQVFQGLSYMHQNGFFHRDLKPENLLVSQ-GIIKIADFGLAREIKSGPPYTN 158
+ + FQV +G+ ++ HRDL N+L+S+ ++KI DFGLAR+I P Y
Sbjct: 138 LEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVR 197
Query: 159 YVGSRW---YRAPEILLQSELYSSKADMWAMGAIMAELFTF-CPLFPGASEADQMYKICG 214
+R + APE + +Y+ ++D+W+ G ++ E+F+ +PG ++ C
Sbjct: 198 KGDARLPLKWMAPETIF-DRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEF---CR 253
Query: 215 VLGSPTMDSWADGLRQARAIKYQFPQLPRANLSALMPSASQDAISLFESLCSW--DPSKR 272
L T + RA Y P++ + L W +PS+R
Sbjct: 254 RLKEGT---------RMRAPDYTTPEMYQTMLDC------------------WHGEPSQR 286
Query: 273 PTAAEALQH 281
PT +E ++H
Sbjct: 287 PTFSELVEH 295
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 74/286 (25%), Positives = 126/286 (44%), Gaps = 35/286 (12%)
Query: 9 ELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLNLREVKC-LRKLNHSNIVKLKE 67
E+GRGA+G V + + +G+ +A+K ++ E L ++ +R + IV+
Sbjct: 29 EIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYG 88
Query: 68 LIQNNNRLYLVFECMECNL---YQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQN-GFF 123
+ ++ E M + Y+ + + + E + + L+++ +N
Sbjct: 89 ALFREGDCWICMELMSTSFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENLKII 148
Query: 124 HRDLKPENLLVSQ-GIIKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQS---ELYSS 179
HRD+KP N+L+ + G IK+ DFG++ ++ T G R Y APE + S + Y
Sbjct: 149 HRDIKPSNILLDRSGNIKLCDFGISGQLVDSIAKTRDAGCRPYMAPERIDPSASRQGYDV 208
Query: 180 KADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQARAIKYQFP 239
++D+W++G + EL T G P +S D L Q +K P
Sbjct: 209 RSDVWSLGITLYELAT------------------GRFPYPKWNSVFDQLTQ--VVKGDPP 248
Query: 240 QLPRANLSALMPSASQDAISLFESLC-SWDPSKRPTAAEALQHPFF 284
QL + PS F +LC + D SKRP E L+HPF
Sbjct: 249 QLSNSEEREFSPSFIN-----FVNLCLTKDESKRPKYKELLKHPFI 289
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 76/302 (25%), Positives = 138/302 (45%), Gaps = 54/302 (17%)
Query: 4 YSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLNLR-EVKCLRKLN-HSN 61
YS K++G G +VFQ +E + AIK + A + + R E+ L KL HS+
Sbjct: 58 YSILKQIGSGGSSKVFQVLNEKK-QIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSD 116
Query: 62 -IVKLKELIQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQN 120
I++L + + +Y+V EC +L + + +K E K++ + + + +HQ+
Sbjct: 117 KIIRLYDYEITDQYIYMVMECGNIDLNSWL--KKKKSIDPWERKSYWKNMLEAVHTIHQH 174
Query: 121 GFFHRDLKPENLLVSQGIIKIADFGLAREIKSGPPYTNY-----VGSRWYRAPEILLQSE 175
G H DLKP N L+ G++K+ DFG+A +++ P T+ VG+ Y PE + +
Sbjct: 175 GIVHSDLKPANFLIVDGMLKLIDFGIANQMQ--PDTTSVVKDSQVGAVNYMPPEAI--KD 230
Query: 176 LYSSK------------ADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDS 223
+ SS+ +D+W++G I+ + P +Q+ K+ ++ P +
Sbjct: 231 MSSSRENGKSKSKISPKSDVWSLGCIL--YYMTYGKTPFQQIINQISKLHAII-DPNHE- 286
Query: 224 WADGLRQARAIKYQFPQLPRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPF 283
+FP +P +L QD + + DP +R + E L HP+
Sbjct: 287 ------------IEFPDIPEKDL--------QD---VLKCCLKRDPKQRISIPELLAHPY 323
Query: 284 FK 285
+
Sbjct: 324 VQ 325
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 100/202 (49%), Gaps = 10/202 (4%)
Query: 1 MDKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLNLREVKCLRKLNHS 60
+DK G E G GR+ +VAIK LK Y + L E + + +H
Sbjct: 49 IDKVVGAGEFGEVCSGRL--KLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHP 106
Query: 61 NIVKLKELIQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQN 120
NI++L+ ++ + + +V E ME + F+ ++ L + G+ Y+
Sbjct: 107 NIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDM 166
Query: 121 GFFHRDLKPENLLVSQGII-KIADFGLAREIKSGP--PYTNYVGS---RWYRAPEILLQS 174
GF HRDL N+L++ ++ K++DFGL+R ++ P YT G RW +PE +
Sbjct: 167 GFVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRW-TSPEAIAYR 225
Query: 175 ELYSSKADMWAMGAIMAELFTF 196
+ ++S +D+W+ G ++ E+ ++
Sbjct: 226 K-FTSASDVWSYGIVLWEVMSY 246
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 101/202 (50%), Gaps = 10/202 (4%)
Query: 1 MDKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLNLREVKCLRKLNHS 60
+DK G E G GR+ + +VAIK LK Y + L E + + +H
Sbjct: 49 IDKVVGAGEFGEVCSGRLKLPSKKEI--SVAIKTLKVGYTEKQRRDFLGEASIMGQFDHP 106
Query: 61 NIVKLKELIQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQN 120
NI++L+ ++ + + +V E ME + F+ ++ L + G+ Y+
Sbjct: 107 NIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDM 166
Query: 121 GFFHRDLKPENLLVSQGII-KIADFGLAREIKSGP--PYTNYVGS---RWYRAPEILLQS 174
G+ HRDL N+L++ ++ K++DFGLAR ++ P YT G RW +PE +
Sbjct: 167 GYVHRDLAARNILINSNLVCKVSDFGLARVLEDDPEAAYTTRGGKIPIRW-TSPEAIAYR 225
Query: 175 ELYSSKADMWAMGAIMAELFTF 196
+ ++S +D+W+ G ++ E+ ++
Sbjct: 226 K-FTSASDVWSYGIVLWEVMSY 246
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 81/309 (26%), Positives = 136/309 (44%), Gaps = 60/309 (19%)
Query: 2 DKYSGFKELGRGAFGRVFQA----FDEH-TGEAVAIKELKQRYASWEDCLNLREVKCLRK 56
D+ K LGRGAFG+V +A D+ T VA+K LK+ E + E+K L
Sbjct: 18 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 77
Query: 57 LNHS-NIVKL-KELIQNNNRLYLVFE-CMECNLYQLMAARD--------------RKLFS 99
+ H N+V L + L ++ E C NL + ++ + +
Sbjct: 78 IGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLT 137
Query: 100 EPEIKAWLFQVFQGLSYMHQNGFFHRDLKPENLLVSQ-GIIKIADFGLAREIKSGPPYTN 158
+ + FQV +G+ ++ HRDL N+L+S+ ++KI DFGLAR+I P Y
Sbjct: 138 LEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVR 197
Query: 159 YVGSRW---YRAPEILLQSELYSSKADMWAMGAIMAELFTF-CPLFPGASEADQMYKICG 214
+R + APE + +Y+ ++D+W+ G ++ E+F+ +PG ++ C
Sbjct: 198 KGDARLPLKWMAPETIF-DRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEF---CR 253
Query: 215 VLGSPTMDSWADGLRQARAIKYQFPQLPRANLSALMPSASQDAISLFESLCSW--DPSKR 272
L T + RA Y P++ + L W +PS+R
Sbjct: 254 RLKEGT---------RMRAPDYTTPEMYQTMLDC------------------WHGEPSQR 286
Query: 273 PTAAEALQH 281
PT +E ++H
Sbjct: 287 PTFSELVEH 295
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 99/196 (50%), Gaps = 11/196 (5%)
Query: 10 LGRGAFGRVFQAFDEHTGE---AVAIKELKQRYASWEDCLNLREVKCLRKLNHSNIVKLK 66
+G G FG V + G+ VAIK LK Y + L E + + +H NI+ L+
Sbjct: 30 IGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIHLE 89
Query: 67 ELIQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQNGFFHRD 126
++ + + +V E ME ++ F+ ++ L + G+ Y+ G+ HRD
Sbjct: 90 GVVTKSKPVMIVTEYMENGSLDTFLKKNDGQFTVIQLVGMLRGISAGMKYLSDMGYVHRD 149
Query: 127 LKPENLLVSQGII-KIADFGLAREIKSGP--PYTNYVGS---RWYRAPEILLQSELYSSK 180
L N+L++ ++ K++DFGL+R ++ P YT G RW APE + + ++S
Sbjct: 150 LAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRW-TAPEAIAFRK-FTSA 207
Query: 181 ADMWAMGAIMAELFTF 196
+D+W+ G +M E+ ++
Sbjct: 208 SDVWSYGIVMWEVVSY 223
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 76/302 (25%), Positives = 138/302 (45%), Gaps = 54/302 (17%)
Query: 4 YSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLNLR-EVKCLRKLN-HSN 61
YS K++G G +VFQ +E + AIK + A + + R E+ L KL HS+
Sbjct: 14 YSILKQIGSGGSSKVFQVLNEKK-QIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSD 72
Query: 62 -IVKLKELIQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQN 120
I++L + + +Y+V EC +L + + +K E K++ + + + +HQ+
Sbjct: 73 KIIRLYDYEITDQYIYMVMECGNIDLNSWL--KKKKSIDPWERKSYWKNMLEAVHTIHQH 130
Query: 121 GFFHRDLKPENLLVSQGIIKIADFGLAREIKSGPPYTNY-----VGSRWYRAPEILLQSE 175
G H DLKP N L+ G++K+ DFG+A +++ P T+ VG+ Y PE + +
Sbjct: 131 GIVHSDLKPANFLIVDGMLKLIDFGIANQMQ--PDTTSVVKDSQVGTVNYMPPEAI--KD 186
Query: 176 LYSSK------------ADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDS 223
+ SS+ +D+W++G I+ + P +Q+ K+ ++ P +
Sbjct: 187 MSSSRENGKSKSKISPKSDVWSLGCIL--YYMTYGKTPFQQIINQISKLHAII-DPNHE- 242
Query: 224 WADGLRQARAIKYQFPQLPRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPF 283
+FP +P +L QD + + DP +R + E L HP+
Sbjct: 243 ------------IEFPDIPEKDL--------QD---VLKCCLKRDPKQRISIPELLAHPY 279
Query: 284 FK 285
+
Sbjct: 280 VQ 281
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 76/302 (25%), Positives = 138/302 (45%), Gaps = 54/302 (17%)
Query: 4 YSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLNLR-EVKCLRKLN-HSN 61
YS K++G G +VFQ +E + AIK + A + + R E+ L KL HS+
Sbjct: 10 YSILKQIGSGGSSKVFQVLNEKK-QIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSD 68
Query: 62 -IVKLKELIQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQN 120
I++L + + +Y+V EC +L + + +K E K++ + + + +HQ+
Sbjct: 69 KIIRLYDYEITDQYIYMVMECGNIDLNSWL--KKKKSIDPWERKSYWKNMLEAVHTIHQH 126
Query: 121 GFFHRDLKPENLLVSQGIIKIADFGLAREIKSGPPYTNY-----VGSRWYRAPEILLQSE 175
G H DLKP N L+ G++K+ DFG+A +++ P T+ VG+ Y PE + +
Sbjct: 127 GIVHSDLKPANFLIVDGMLKLIDFGIANQMQ--PDTTSVVKDSQVGTVNYMPPEAI--KD 182
Query: 176 LYSSK------------ADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDS 223
+ SS+ +D+W++G I+ + P +Q+ K+ ++ P +
Sbjct: 183 MSSSRENGKSKSKISPKSDVWSLGCIL--YYMTYGKTPFQQIINQISKLHAII-DPNHE- 238
Query: 224 WADGLRQARAIKYQFPQLPRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPF 283
+FP +P +L QD + + DP +R + E L HP+
Sbjct: 239 ------------IEFPDIPEKDL--------QD---VLKCCLKRDPKQRISIPELLAHPY 275
Query: 284 FK 285
+
Sbjct: 276 VQ 277
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 76/302 (25%), Positives = 138/302 (45%), Gaps = 54/302 (17%)
Query: 4 YSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLNLR-EVKCLRKLN-HSN 61
YS K++G G +VFQ +E + AIK + A + + R E+ L KL HS+
Sbjct: 11 YSILKQIGSGGSSKVFQVLNE-KKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSD 69
Query: 62 -IVKLKELIQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQN 120
I++L + + +Y+V EC +L + + +K E K++ + + + +HQ+
Sbjct: 70 KIIRLYDYEITDQYIYMVMECGNIDLNSWL--KKKKSIDPWERKSYWKNMLEAVHTIHQH 127
Query: 121 GFFHRDLKPENLLVSQGIIKIADFGLAREIKSGPPYTNY-----VGSRWYRAPEILLQSE 175
G H DLKP N L+ G++K+ DFG+A +++ P T+ VG+ Y PE + +
Sbjct: 128 GIVHSDLKPANFLIVDGMLKLIDFGIANQMQ--PDTTSVVKDSQVGTVNYMPPEAI--KD 183
Query: 176 LYSSK------------ADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDS 223
+ SS+ +D+W++G I+ + P +Q+ K+ ++ P +
Sbjct: 184 MSSSRENGKSKSKISPKSDVWSLGCIL--YYMTYGKTPFQQIINQISKLHAII-DPNHE- 239
Query: 224 WADGLRQARAIKYQFPQLPRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPF 283
+FP +P +L QD + + DP +R + E L HP+
Sbjct: 240 ------------IEFPDIPEKDL--------QD---VLKCCLKRDPKQRISIPELLAHPY 276
Query: 284 FK 285
+
Sbjct: 277 VQ 278
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 76/302 (25%), Positives = 138/302 (45%), Gaps = 54/302 (17%)
Query: 4 YSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLNLR-EVKCLRKLN-HSN 61
YS K++G G +VFQ +E + AIK + A + + R E+ L KL HS+
Sbjct: 30 YSILKQIGSGGSSKVFQVLNE-KKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSD 88
Query: 62 -IVKLKELIQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQN 120
I++L + + +Y+V EC +L + + +K E K++ + + + +HQ+
Sbjct: 89 KIIRLYDYEITDQYIYMVMECGNIDLNSWL--KKKKSIDPWERKSYWKNMLEAVHTIHQH 146
Query: 121 GFFHRDLKPENLLVSQGIIKIADFGLAREIKSGPPYTNY-----VGSRWYRAPEILLQSE 175
G H DLKP N L+ G++K+ DFG+A +++ P T+ VG+ Y PE + +
Sbjct: 147 GIVHSDLKPANFLIVDGMLKLIDFGIANQMQ--PDTTSVVKDSQVGTVNYMPPEAI--KD 202
Query: 176 LYSSK------------ADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDS 223
+ SS+ +D+W++G I+ + P +Q+ K+ ++ P +
Sbjct: 203 MSSSRENGKSKSKISPKSDVWSLGCIL--YYMTYGKTPFQQIINQISKLHAII-DPNHE- 258
Query: 224 WADGLRQARAIKYQFPQLPRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPF 283
+FP +P +L QD + + DP +R + E L HP+
Sbjct: 259 ------------IEFPDIPEKDL--------QD---VLKCCLKRDPKQRISIPELLAHPY 295
Query: 284 FK 285
+
Sbjct: 296 VQ 297
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 101/202 (50%), Gaps = 10/202 (4%)
Query: 1 MDKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLNLREVKCLRKLNHS 60
+DK G E G GR+ + +VAIK LK Y + L E + + +H
Sbjct: 20 IDKVVGAGEFGEVCSGRLKLPSKKEI--SVAIKTLKVGYTEKQRRDFLGEASIMGQFDHP 77
Query: 61 NIVKLKELIQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQN 120
NI++L+ ++ + + +V E ME + F+ ++ L + G+ Y+
Sbjct: 78 NIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDM 137
Query: 121 GFFHRDLKPENLLVSQGII-KIADFGLAREIKSGP--PYTNYVGS---RWYRAPEILLQS 174
G+ HRDL N+L++ ++ K++DFGL+R ++ P YT G RW +PE +
Sbjct: 138 GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRW-TSPEAIAYR 196
Query: 175 ELYSSKADMWAMGAIMAELFTF 196
+ ++S +D+W+ G ++ E+ ++
Sbjct: 197 K-FTSASDVWSYGIVLWEVMSY 217
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 101/202 (50%), Gaps = 10/202 (4%)
Query: 1 MDKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLNLREVKCLRKLNHS 60
+DK G E G GR+ + +VAIK LK Y + L E + + +H
Sbjct: 49 IDKVVGAGEFGEVCSGRLKLPSKKEI--SVAIKTLKVGYTEKQRRDFLGEASIMGQFDHP 106
Query: 61 NIVKLKELIQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQN 120
NI++L+ ++ + + +V E ME + F+ ++ L + G+ Y+
Sbjct: 107 NIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDM 166
Query: 121 GFFHRDLKPENLLVSQGII-KIADFGLAREIKSGP--PYTNYVGS---RWYRAPEILLQS 174
G+ HRDL N+L++ ++ K++DFGL+R ++ P YT G RW +PE +
Sbjct: 167 GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRW-TSPEAIAYR 225
Query: 175 ELYSSKADMWAMGAIMAELFTF 196
+ ++S +D+W+ G ++ E+ ++
Sbjct: 226 K-FTSASDVWSYGIVLWEVMSY 246
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 101/202 (50%), Gaps = 10/202 (4%)
Query: 1 MDKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLNLREVKCLRKLNHS 60
+DK G E G GR+ + +VAIK LK Y + L E + + +H
Sbjct: 37 IDKVVGAGEFGEVCSGRLKLPSKKEI--SVAIKTLKVGYTEKQRRDFLGEASIMGQFDHP 94
Query: 61 NIVKLKELIQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQN 120
NI++L+ ++ + + +V E ME + F+ ++ L + G+ Y+
Sbjct: 95 NIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDM 154
Query: 121 GFFHRDLKPENLLVSQGII-KIADFGLAREIKSGP--PYTNYVGS---RWYRAPEILLQS 174
G+ HRDL N+L++ ++ K++DFGL+R ++ P YT G RW +PE +
Sbjct: 155 GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRW-TSPEAIAYR 213
Query: 175 ELYSSKADMWAMGAIMAELFTF 196
+ ++S +D+W+ G ++ E+ ++
Sbjct: 214 K-FTSASDVWSYGIVLWEVMSY 234
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 100/198 (50%), Gaps = 13/198 (6%)
Query: 10 LGRGAFGRVFQAFDEHTGE---AVAIKELKQRYASWEDCLNLREVKCLRKLNHSNIVKLK 66
+G G FG V + + G+ VAIK LK Y + L E + + H NI++L+
Sbjct: 24 IGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIRLE 83
Query: 67 ELIQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQNGFFHRD 126
++ N+ + ++ E ME + F+ ++ L + G+ Y+ + + HRD
Sbjct: 84 GVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGMLRGIASGMRYLAEMSYVHRD 143
Query: 127 LKPENLLVSQGII-KIADFGLAR---EIKSGPPYTNYVGS----RWYRAPEILLQSELYS 178
L N+LV+ ++ K++DFGL+R E S P T+ +G RW APE + + ++
Sbjct: 144 LAARNILVNSNLVCKVSDFGLSRFLEENSSDPTETSSLGGKIPIRWT-APEAIAFRK-FT 201
Query: 179 SKADMWAMGAIMAELFTF 196
S +D W+ G +M E+ +F
Sbjct: 202 SASDAWSYGIVMWEVMSF 219
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/237 (29%), Positives = 118/237 (49%), Gaps = 38/237 (16%)
Query: 8 KELGRGAFGRVFQAFDEHTG---------EAVAIKELKQRYASWEDCLNL-REVKCLRKL 57
K LG GAFG+V A E G VA+K LK A+ +D +L E++ ++ +
Sbjct: 34 KPLGEGAFGQVVLA--EAIGLDKDKPNRVTKVAVKMLKSD-ATEKDLSDLISEMEMMKMI 90
Query: 58 N-HSNIVKLKELIQNNNRLYLVFE-CMECNLYQLMAARD--------------RKLFSEP 101
H NI+ L + LY++ E + NL + + AR+ + S
Sbjct: 91 GKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQLSSK 150
Query: 102 EIKAWLFQVFQGLSYMHQNGFFHRDLKPENLLVSQ-GIIKIADFGLAREIKSGPPYTNYV 160
++ + +QV +G+ Y+ HRDL N+LV++ ++KIADFGLAR+I Y
Sbjct: 151 DLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTT 210
Query: 161 GSRW---YRAPEILLQSELYSSKADMWAMGAIMAELFTF--CPLFPGASEADQMYKI 212
R + APE L +Y+ ++D+W+ G ++ E+FT P +PG ++++K+
Sbjct: 211 NGRLPVKWMAPEALF-DRIYTHQSDVWSFGVLLWEIFTLGGSP-YPGVP-VEELFKL 264
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 101/202 (50%), Gaps = 10/202 (4%)
Query: 1 MDKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLNLREVKCLRKLNHS 60
+DK G E G GR+ + +VAIK LK Y + L E + + +H
Sbjct: 49 IDKVVGAGEFGEVCSGRLKLPSKKEI--SVAIKTLKVGYTEKQRRDFLGEASIMGQFDHP 106
Query: 61 NIVKLKELIQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQN 120
NI++L+ ++ + + +V E ME + F+ ++ L + G+ Y+
Sbjct: 107 NIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDM 166
Query: 121 GFFHRDLKPENLLVSQGII-KIADFGLAREIKSGP--PYTNYVGS---RWYRAPEILLQS 174
G+ HRDL N+L++ ++ K++DFGL+R ++ P YT G RW +PE +
Sbjct: 167 GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRW-TSPEAIAYR 225
Query: 175 ELYSSKADMWAMGAIMAELFTF 196
+ ++S +D+W+ G ++ E+ ++
Sbjct: 226 K-FTSASDVWSYGIVLWEVMSY 246
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 101/202 (50%), Gaps = 10/202 (4%)
Query: 1 MDKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLNLREVKCLRKLNHS 60
+DK G E G GR+ + +VAIK LK Y + L E + + +H
Sbjct: 49 IDKVVGAGEFGEVCSGRLKLPSKKEI--SVAIKTLKVGYTEKQRRDFLGEASIMGQFDHP 106
Query: 61 NIVKLKELIQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQN 120
NI++L+ ++ + + +V E ME + F+ ++ L + G+ Y+
Sbjct: 107 NIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDM 166
Query: 121 GFFHRDLKPENLLVSQGII-KIADFGLAREIKSGP--PYTNYVGS---RWYRAPEILLQS 174
G+ HRDL N+L++ ++ K++DFGL+R ++ P YT G RW +PE +
Sbjct: 167 GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRW-TSPEAIAYR 225
Query: 175 ELYSSKADMWAMGAIMAELFTF 196
+ ++S +D+W+ G ++ E+ ++
Sbjct: 226 K-FTSASDVWSYGIVLWEVMSY 246
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 100/202 (49%), Gaps = 10/202 (4%)
Query: 1 MDKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLNLREVKCLRKLNHS 60
+DK G E G GR+ +VAIK LK Y + L E + + +H
Sbjct: 49 IDKVVGAGEFGEVCSGRL--KLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHP 106
Query: 61 NIVKLKELIQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQN 120
NI++L+ ++ + + +V E ME + F+ ++ L + G+ Y+
Sbjct: 107 NIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDM 166
Query: 121 GFFHRDLKPENLLVSQGII-KIADFGLAREIKSGP--PYTNYVGS---RWYRAPEILLQS 174
G+ HRDL N+L++ ++ K++DFGL+R ++ P YT G RW +PE +
Sbjct: 167 GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRW-TSPEAIAYR 225
Query: 175 ELYSSKADMWAMGAIMAELFTF 196
+ ++S +D+W+ G ++ E+ ++
Sbjct: 226 K-FTSASDVWSYGIVLWEVMSY 246
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 101/202 (50%), Gaps = 10/202 (4%)
Query: 1 MDKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLNLREVKCLRKLNHS 60
+DK G E G GR+ + +VAIK LK Y + L E + + +H
Sbjct: 49 IDKVVGAGEFGEVCSGRLKLPSKKEI--SVAIKTLKVGYTEKQRRDFLGEASIMGQFDHP 106
Query: 61 NIVKLKELIQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQN 120
NI++L+ ++ + + +V E ME + F+ ++ L + G+ Y+
Sbjct: 107 NIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDM 166
Query: 121 GFFHRDLKPENLLVSQGII-KIADFGLAREIKSGP--PYTNYVGS---RWYRAPEILLQS 174
G+ HRDL N+L++ ++ K++DFGL+R ++ P YT G RW +PE +
Sbjct: 167 GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRW-TSPEAIAYR 225
Query: 175 ELYSSKADMWAMGAIMAELFTF 196
+ ++S +D+W+ G ++ E+ ++
Sbjct: 226 K-FTSASDVWSYGIVLWEVMSY 246
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 101/202 (50%), Gaps = 10/202 (4%)
Query: 1 MDKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLNLREVKCLRKLNHS 60
+DK G E G GR+ + +VAIK LK Y + L E + + +H
Sbjct: 20 IDKVVGAGEFGEVCSGRLKLPSKKEI--SVAIKTLKVGYTEKQRRDFLGEASIMGQFDHP 77
Query: 61 NIVKLKELIQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQN 120
NI++L+ ++ + + +V E ME + F+ ++ L + G+ Y+
Sbjct: 78 NIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDM 137
Query: 121 GFFHRDLKPENLLVSQGII-KIADFGLAREIKSGP--PYTNYVGS---RWYRAPEILLQS 174
G+ HRDL N+L++ ++ K++DFGL+R ++ P YT G RW +PE +
Sbjct: 138 GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRW-TSPEAIAYR 196
Query: 175 ELYSSKADMWAMGAIMAELFTF 196
+ ++S +D+W+ G ++ E+ ++
Sbjct: 197 K-FTSASDVWSYGIVLWEVMSY 217
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/223 (30%), Positives = 112/223 (50%), Gaps = 30/223 (13%)
Query: 2 DKYSGFKELGRGAFGRVFQA----FDEHTGE---AVAIKELKQRYASWEDCLNL-REVKC 53
DK + K LG GAFG+V A D+ + VA+K LK A+ +D +L E++
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDD-ATEKDLSDLVSEMEM 93
Query: 54 LRKLN-HSNIVKLKELIQNNNRLYLVFE-CMECNLYQLMAAR---------DRKLFSEPE 102
++ + H NI+ L + LY++ E + NL + + AR D E +
Sbjct: 94 MKMIGKHKNIITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQ 153
Query: 103 IK-----AWLFQVFQGLSYMHQNGFFHRDLKPENLLVSQG-IIKIADFGLAREIKSGPPY 156
+ + +Q+ +G+ Y+ HRDL N+LV++ ++KIADFGLAR+I + Y
Sbjct: 154 MTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYY 213
Query: 157 TNYVGSRW---YRAPEILLQSELYSSKADMWAMGAIMAELFTF 196
R + APE L +Y+ ++D+W+ G +M E+FT
Sbjct: 214 KKTTNGRLPVKWMAPEALF-DRVYTHQSDVWSFGVLMWEIFTL 255
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 101/202 (50%), Gaps = 10/202 (4%)
Query: 1 MDKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLNLREVKCLRKLNHS 60
+DK G E G GR+ + +VAIK LK Y + L E + + +H
Sbjct: 47 IDKVVGAGEFGEVCSGRLKLPSKKEI--SVAIKTLKVGYTEKQRRDFLGEASIMGQFDHP 104
Query: 61 NIVKLKELIQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQN 120
NI++L+ ++ + + +V E ME + F+ ++ L + G+ Y+
Sbjct: 105 NIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDM 164
Query: 121 GFFHRDLKPENLLVSQGII-KIADFGLAREIKSGP--PYTNYVGS---RWYRAPEILLQS 174
G+ HRDL N+L++ ++ K++DFGL+R ++ P YT G RW +PE +
Sbjct: 165 GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRW-TSPEAIAYR 223
Query: 175 ELYSSKADMWAMGAIMAELFTF 196
+ ++S +D+W+ G ++ E+ ++
Sbjct: 224 K-FTSASDVWSYGIVLWEVMSY 244
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 100/202 (49%), Gaps = 10/202 (4%)
Query: 1 MDKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLNLREVKCLRKLNHS 60
+DK G E G GR+ + +VAIK LK Y + L E + + +H
Sbjct: 49 IDKVVGAGEFGEVCSGRLKLPSKKEI--SVAIKTLKVGYTEKQRRDFLGEASIMGQFDHP 106
Query: 61 NIVKLKELIQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQN 120
NI++L+ ++ + + +V E ME + F+ ++ L + G+ Y+
Sbjct: 107 NIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDM 166
Query: 121 GFFHRDLKPENLLVSQGII-KIADFGLAREIKSGP--PYTNYVGS---RWYRAPEILLQS 174
G+ HRDL N+L++ ++ K++DFGL R ++ P YT G RW +PE +
Sbjct: 167 GYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTTRGGKIPIRW-TSPEAIAYR 225
Query: 175 ELYSSKADMWAMGAIMAELFTF 196
+ ++S +D+W+ G ++ E+ ++
Sbjct: 226 K-FTSASDVWSYGIVLWEVMSY 246
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 101/213 (47%), Gaps = 29/213 (13%)
Query: 8 KELGRGAFGRVFQA-----FDEHTGEAVAIKELKQRYASWEDCLNLREVKCLRKLNHSNI 62
+ELG GAFG+VF A E VA+K LK + + RE + L L H +I
Sbjct: 19 RELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFH-REAELLTNLQHEHI 77
Query: 63 VKLKELIQNNNRLYLVFECM---ECNLYQLMAARDRKLFSEPEIKAWLFQ---------V 110
VK + + L +VFE M + N + D L +E L Q +
Sbjct: 78 VKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQI 137
Query: 111 FQGLSYMHQNGFFHRDLKPENLLVSQG-IIKIADFGLAREIKSGPPYTNYVGS------R 163
G+ Y+ F HRDL N LV + ++KI DFG++R++ S Y VG R
Sbjct: 138 AAGMVYLASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYR--VGGHTMLPIR 195
Query: 164 WYRAPEILLQSELYSSKADMWAMGAIMAELFTF 196
W I+ + +++++D+W++G ++ E+FT+
Sbjct: 196 WMPPESIMYRK--FTTESDVWSLGVVLWEIFTY 226
>pdb|3LLT|A Chain A, Crystal Structure Of Pf14_0431, Kinase Domain
Length = 360
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 79/333 (23%), Positives = 138/333 (41%), Gaps = 66/333 (19%)
Query: 7 FKELGRGAFGRVF--QAFDEHTGEAVAIKELKQRYASWEDCLNLREVKCLRKLNHSNIVK 64
+++G G FGRV Q D AV + ++Y E L+K+ + +I
Sbjct: 40 IRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNIKKYTRSAKI----EADILKKIQNDDINN 95
Query: 65 LKELIQNNNRLY-----LVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQ 119
+ + +Y L+FE + +LY+++ + F +IK + ++ + L+Y+ +
Sbjct: 96 NNIVKYHGKFMYYDHMCLIFEPLGPSLYEIITRNNYNGFHIEDIKLYCIEILKALNYLRK 155
Query: 120 NGFFHRDLKPENLL---------------VSQGI-----------IKIADFGLAREIKSG 153
H DLKPEN+L V+ G IK+ DFG A KS
Sbjct: 156 MSLTHTDLKPENILLDDPYFEKSLITVRRVTDGKKIQIYRTKSTGIKLIDFGCA-TFKSD 214
Query: 154 PPYTNYVGSRWYRAPEILLQSELYSSKADMWAMGAIMAELFTFCPLFPGASEADQ----- 208
+ + + +R YRAPE++L + +DMW+ G ++AEL+T LF +
Sbjct: 215 -YHGSIINTRQYRAPEVILNLG-WDVSSDMWSFGCVLAELYTGSLLFRTHEHMEHLAMME 272
Query: 209 ----------MYKICGVLGSPTMD------SWADGLRQARAIKYQFPQLPRANLSALMPS 252
+Y+ GS ++ +W + +IK+ LP +
Sbjct: 273 SIIQPIPKNMLYEATKTNGSKYVNKDELKLAWPENASSINSIKHVKKCLPLYKI-----I 327
Query: 253 ASQDAISLFESLCSWDPSKRPTAAEALQHPFFK 285
+ S+ DP+ RP+ AE L+H F +
Sbjct: 328 KHELFCDFLYSILQIDPTLRPSPAELLKHKFLE 360
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 99/195 (50%), Gaps = 14/195 (7%)
Query: 10 LGRGAFGRVFQAFDEHTGEAVAIKEL-KQRYASWEDCLNLR----EVKCLRKLNH--SNI 62
LG G FG V+ VAIK + K R + W + N EV L+K++ S +
Sbjct: 16 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 75
Query: 63 VKLKELIQNNNRLYLVFECMEC--NLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQN 120
++L + + + L+ E ME +L+ + +R E +++ +QV + + + H
Sbjct: 76 IRLLDWFERPDSFVLILERMEPVQDLFDFIT--ERGALQEELARSFFWQVLEAVRHCHNC 133
Query: 121 GFFHRDLKPENLLV--SQGIIKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQSELYS 178
G HRD+K EN+L+ ++G +K+ DFG +K YT++ G+R Y PE + +
Sbjct: 134 GVLHRDIKDENILIDLNRGELKLIDFGSGALLKD-TVYTDFDGTRVYSPPEWIRYHRYHG 192
Query: 179 SKADMWAMGAIMAEL 193
A +W++G ++ ++
Sbjct: 193 RSAAVWSLGILLYDM 207
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/300 (24%), Positives = 136/300 (45%), Gaps = 50/300 (16%)
Query: 4 YSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLNLR-EVKCLRKLN-HSN 61
YS K++G G +VFQ +E + AIK + A + + R E+ L KL HS+
Sbjct: 30 YSILKQIGSGGSSKVFQVLNE-KKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSD 88
Query: 62 -IVKLKELIQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQN 120
I++L + + +Y+V EC +L + + +K E K++ + + + +HQ+
Sbjct: 89 KIIRLYDYEITDQYIYMVMECGNIDLNSWL--KKKKSIDPWERKSYWKNMLEAVHTIHQH 146
Query: 121 GFFHRDLKPENLLVSQGIIKIADFGLAREIKSGPPYT---NYVGSRWYRAPEILLQSELY 177
G H DLKP N L+ G++K+ DFG+A +++ + VG+ Y PE + ++
Sbjct: 147 GIVHSDLKPANFLIVDGMLKLIDFGIANQMQPDXXXVVKDSQVGTVNYMPPEAI--KDMS 204
Query: 178 SSK------------ADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWA 225
SS+ +D+W++G I+ + P +Q+ K+ ++ P +
Sbjct: 205 SSRENGKSKSKISPKSDVWSLGCIL--YYMTYGKTPFQQIINQISKLHAII-DPNHE--- 258
Query: 226 DGLRQARAIKYQFPQLPRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFFK 285
+FP +P +L QD + + DP +R + E L HP+ +
Sbjct: 259 ----------IEFPDIPEKDL--------QD---VLKCCLKRDPKQRISIPELLAHPYVQ 297
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/204 (31%), Positives = 100/204 (49%), Gaps = 27/204 (13%)
Query: 10 LGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCL----NLR-EVKCLRKLNHSNIVK 64
+G G FG+V++AF G+ VA+K R+ ED N+R E K L H NI+
Sbjct: 15 IGIGGFGKVYRAF--WIGDEVAVK--AARHDPDEDISQTIENVRQEAKLFAMLKHPNIIA 70
Query: 65 LKELIQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKA-WLFQVFQGLSYMHQNGF- 122
L+ + L LV E + + R P+I W Q+ +G++Y+H
Sbjct: 71 LRGVCLKEPNLCLVMEFARGGPLNRVLSGKR---IPPDILVNWAVQIARGMNYLHDEAIV 127
Query: 123 --FHRDLKPENLLV---------SQGIIKIADFGLAREIKSGPPYTNYVGSRWYRAPEIL 171
HRDLK N+L+ S I+KI DFGLARE + G+ + APE+
Sbjct: 128 PIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHRTTKMS-AAGAYAWMAPEV- 185
Query: 172 LQSELYSSKADMWAMGAIMAELFT 195
+++ ++S +D+W+ G ++ EL T
Sbjct: 186 IRASMFSKGSDVWSYGVLLWELLT 209
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 101/209 (48%), Gaps = 12/209 (5%)
Query: 10 LGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWED---CLNLREVKCLRKLNHSNIVKLK 66
LG+G+FG+V + + T E A+K LK+ +D C + + + +L
Sbjct: 349 LGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLH 408
Query: 67 ELIQNNNRLYLVFECMECN--LYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQNGFFH 124
Q +RLY V E + +Y + F EP + ++ GL ++ G +
Sbjct: 409 SCFQTMDRLYFVMEYVNGGDLMYHIQQV---GRFKEPHAVFYAAEIAIGLFFLQSKGIIY 465
Query: 125 RDLKPENLLV-SQGIIKIADFGLARE-IKSGPPYTNYVGSRWYRAPEILLQSELYSSKAD 182
RDLK +N+++ S+G IKIADFG+ +E I G + G+ Y APEI+ + Y D
Sbjct: 466 RDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKXFCGTPDYIAPEIIAY-QPYGKSVD 524
Query: 183 MWAMGAIMAELFTFCPLFPGASEADQMYK 211
WA G ++ E+ F G E D++++
Sbjct: 525 WWAFGVLLYEMLAGQAPFEGEDE-DELFQ 552
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 100/198 (50%), Gaps = 13/198 (6%)
Query: 10 LGRGAFGRVFQAFDEHTGEA---VAIKELKQRYASWEDCLNLREVKCLRKLNHSNIVKLK 66
+G G FG V + G+ VAIK LK Y + L E + + +H N++ L+
Sbjct: 15 IGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLE 74
Query: 67 ELIQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQNGFFHRD 126
++ + + ++ E ME ++ F+ ++ L + G+ Y+ + HR
Sbjct: 75 GVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLADMNYVHRA 134
Query: 127 LKPENLLVSQGII-KIADFGLAREIK---SGPPYTNYVGS----RWYRAPEILLQSELYS 178
L N+LV+ ++ K++DFGL+R ++ S P YT+ +G RW APE +Q ++
Sbjct: 135 LAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRW-TAPE-AIQYRKFT 192
Query: 179 SKADMWAMGAIMAELFTF 196
S +D+W+ G +M E+ ++
Sbjct: 193 SASDVWSYGIVMWEVMSY 210
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/223 (30%), Positives = 112/223 (50%), Gaps = 30/223 (13%)
Query: 2 DKYSGFKELGRGAFGRVFQA----FDEHTGE---AVAIKELKQRYASWEDCLNL-REVKC 53
DK + K LG GAFG+V A D+ + VA+K LK A+ +D +L E++
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDD-ATEKDLSDLVSEMEM 93
Query: 54 LRKLN-HSNIVKLKELIQNNNRLYLVFE-CMECNLYQLMAAR---------DRKLFSEPE 102
++ + H NI+ L + LY++ E + NL + + AR D E +
Sbjct: 94 MKMIGKHKNIIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQ 153
Query: 103 IK-----AWLFQVFQGLSYMHQNGFFHRDLKPENLLVSQG-IIKIADFGLAREIKSGPPY 156
+ + +Q+ +G+ Y+ HRDL N+LV++ ++KIADFGLAR+I + Y
Sbjct: 154 MTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYY 213
Query: 157 TNYVGSRW---YRAPEILLQSELYSSKADMWAMGAIMAELFTF 196
R + APE L +Y+ ++D+W+ G +M E+FT
Sbjct: 214 KKTTNGRLPVKWMAPEALF-DRVYTHQSDVWSFGVLMWEIFTL 255
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 71/290 (24%), Positives = 132/290 (45%), Gaps = 44/290 (15%)
Query: 10 LGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLNLREVKCLRKL-NHSNIVKL-KE 67
+G G +G+V++ TG+ AIK + E+ +E+ L+K +H NI
Sbjct: 32 VGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIK--QEINMLKKYSHHRNIATYYGA 89
Query: 68 LIQNN-----NRLYLVFE-CMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQNG 121
I+ N ++L+LV E C ++ L+ E I ++ +GLS++HQ+
Sbjct: 90 FIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHK 149
Query: 122 FFHRDLKPENLLVSQGI-IKIADFGLAREIKSGPPYTN-YVGSRWYRAPEILLQSE---- 175
HRD+K +N+L+++ +K+ DFG++ ++ N ++G+ ++ APE++ E
Sbjct: 150 VIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDA 209
Query: 176 LYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQARAIK 235
Y K+D+W++G E+ P P D + RA+
Sbjct: 210 TYDFKSDLWSLGITAIEMAEGAP--------------------PLCD-----MHPMRAL- 243
Query: 236 YQFPQLPRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQHPFFK 285
+ P+ P L + S+ S ES + S+RP + ++HPF +
Sbjct: 244 FLIPRNPAPRLKS--KKWSKKFQSFIESCLVKNHSQRPATEQLMKHPFIR 291
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 80/309 (25%), Positives = 135/309 (43%), Gaps = 60/309 (19%)
Query: 2 DKYSGFKELGRGAFGRVFQA----FDEH-TGEAVAIKELKQRYASWEDCLNLREVKCLRK 56
D+ K LGRGAFG+V +A D+ T VA+K LK+ E + E+K L
Sbjct: 27 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 86
Query: 57 LNHS-NIVKL-KELIQNNNRLYLVFE-CMECNLYQLMAARD--------------RKLFS 99
+ H N+V L + L ++ E C NL + ++ + +
Sbjct: 87 IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLT 146
Query: 100 EPEIKAWLFQVFQGLSYMHQNGFFHRDLKPENLLVSQ-GIIKIADFGLAREIKSGPPYTN 158
+ + FQV +G+ ++ HRDL N+L+S+ ++KI DFGLAR+I P
Sbjct: 147 LEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVR 206
Query: 159 YVGSRW---YRAPEILLQSELYSSKADMWAMGAIMAELFTF-CPLFPGASEADQMYKICG 214
+R + APE + +Y+ ++D+W+ G ++ E+F+ +PG ++ C
Sbjct: 207 KGDARLPLKWMAPETIF-DRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEF---CR 262
Query: 215 VLGSPTMDSWADGLRQARAIKYQFPQLPRANLSALMPSASQDAISLFESLCSW--DPSKR 272
L T + RA Y P++ + L W +PS+R
Sbjct: 263 RLKEGT---------RMRAPDYTTPEMYQTMLDC------------------WHGEPSQR 295
Query: 273 PTAAEALQH 281
PT +E ++H
Sbjct: 296 PTFSELVEH 304
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/192 (31%), Positives = 103/192 (53%), Gaps = 11/192 (5%)
Query: 9 ELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLNLREVKCLRKLNHSNIVKLKEL 68
+LG+G FG V+ T VAIK LK S E L +E + ++KL H +V+L +
Sbjct: 15 KLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPEAFL--QEAQVMKKLRHEKLVQLYAV 71
Query: 69 IQNNNRLYLVFECM-ECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQNGFFHRDL 127
+ + + +V E M + +L + K P++ Q+ G++Y+ + + HRDL
Sbjct: 72 V-SEEPIXIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDL 130
Query: 128 KPENLLVSQGII-KIADFGLAREIKSGPPYTNYVGSRW---YRAPEILLQSELYSSKADM 183
+ N+LV + ++ K+ADFGLAR I+ T G+++ + APE L ++ K+D+
Sbjct: 131 RAANILVGENLVCKVADFGLARLIEDN-EXTARQGAKFPIKWTAPEAALYGR-FTIKSDV 188
Query: 184 WAMGAIMAELFT 195
W+ G ++ EL T
Sbjct: 189 WSFGILLTELTT 200
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 80/309 (25%), Positives = 135/309 (43%), Gaps = 60/309 (19%)
Query: 2 DKYSGFKELGRGAFGRVFQA----FDEH-TGEAVAIKELKQRYASWEDCLNLREVKCLRK 56
D+ K LGRGAFG+V +A D+ T VA+K LK+ E + E+K L
Sbjct: 18 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 77
Query: 57 LNHS-NIVKL-KELIQNNNRLYLVFE-CMECNLYQLMAARD--------------RKLFS 99
+ H N+V L + L ++ E C NL + ++ + +
Sbjct: 78 IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLT 137
Query: 100 EPEIKAWLFQVFQGLSYMHQNGFFHRDLKPENLLVSQ-GIIKIADFGLAREIKSGPPYTN 158
+ + FQV +G+ ++ HRDL N+L+S+ ++KI DFGLAR+I P
Sbjct: 138 LEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVR 197
Query: 159 YVGSRW---YRAPEILLQSELYSSKADMWAMGAIMAELFTF-CPLFPGASEADQMYKICG 214
+R + APE + +Y+ ++D+W+ G ++ E+F+ +PG ++ C
Sbjct: 198 KGDARLPLKWMAPETIF-DRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEF---CR 253
Query: 215 VLGSPTMDSWADGLRQARAIKYQFPQLPRANLSALMPSASQDAISLFESLCSW--DPSKR 272
L T + RA Y P++ + L W +PS+R
Sbjct: 254 RLKEGT---------RMRAPDYTTPEMYQTMLDC------------------WHGEPSQR 286
Query: 273 PTAAEALQH 281
PT +E ++H
Sbjct: 287 PTFSELVEH 295
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 101/209 (48%), Gaps = 12/209 (5%)
Query: 10 LGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWED---CLNLREVKCLRKLNHSNIVKLK 66
LG+G+FG+V + + T E A+K LK+ +D C + + + +L
Sbjct: 28 LGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLH 87
Query: 67 ELIQNNNRLYLVFECMECN--LYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQNGFFH 124
Q +RLY V E + +Y + F EP + ++ GL ++ G +
Sbjct: 88 SCFQTMDRLYFVMEYVNGGDLMYHIQQV---GRFKEPHAVFYAAEIAIGLFFLQSKGIIY 144
Query: 125 RDLKPENLLV-SQGIIKIADFGLARE-IKSGPPYTNYVGSRWYRAPEILLQSELYSSKAD 182
RDLK +N+++ S+G IKIADFG+ +E I G + G+ Y APEI+ + Y D
Sbjct: 145 RDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKXFCGTPDYIAPEII-AYQPYGKSVD 203
Query: 183 MWAMGAIMAELFTFCPLFPGASEADQMYK 211
WA G ++ E+ F G E D++++
Sbjct: 204 WWAFGVLLYEMLAGQAPFEGEDE-DELFQ 231
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 98/198 (49%), Gaps = 11/198 (5%)
Query: 8 KELGRGAFGRVFQAFDEHTGE---AVAIKELKQRYASWEDCLNLREVKCLRKLNHSNIVK 64
K +G G FG V + G+ VAIK LK Y + L E + + +H NI+
Sbjct: 14 KVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIH 73
Query: 65 LKELIQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQNGFFH 124
L+ ++ + ++ E ME ++ F+ ++ L + G+ Y+ + H
Sbjct: 74 LEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMKYLSDMSYVH 133
Query: 125 RDLKPENLLVSQGII-KIADFGLAREIKSGP--PYTNYVGS---RWYRAPEILLQSELYS 178
RDL N+LV+ ++ K++DFG++R ++ P YT G RW APE + + ++
Sbjct: 134 RDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRW-TAPEAIAYRK-FT 191
Query: 179 SKADMWAMGAIMAELFTF 196
S +D+W+ G +M E+ ++
Sbjct: 192 SASDVWSYGIVMWEVMSY 209
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 112/223 (50%), Gaps = 30/223 (13%)
Query: 2 DKYSGFKELGRGAFGRVFQA----FDEHTGE---AVAIKELKQRYASWEDCLNL-REVKC 53
DK + K LG GAFG+V A D+ + VA+K LK A+ +D +L E++
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDD-ATEKDLSDLVSEMEM 93
Query: 54 LRKLN-HSNIVKLKELIQNNNRLYLVFE-CMECNLYQLMAAR---------DRKLFSEPE 102
++ + H NI+ L + LY++ E + NL + + AR D E +
Sbjct: 94 MKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQ 153
Query: 103 IK-----AWLFQVFQGLSYMHQNGFFHRDLKPENLLVSQ-GIIKIADFGLAREIKSGPPY 156
+ + +Q+ +G+ Y+ HRDL N+LV++ +++IADFGLAR+I + Y
Sbjct: 154 MTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMRIADFGLARDINNIDYY 213
Query: 157 TNYVGSRW---YRAPEILLQSELYSSKADMWAMGAIMAELFTF 196
R + APE L +Y+ ++D+W+ G +M E+FT
Sbjct: 214 KKTTNGRLPVKWMAPEALF-DRVYTHQSDVWSFGVLMWEIFTL 255
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 80/309 (25%), Positives = 135/309 (43%), Gaps = 60/309 (19%)
Query: 2 DKYSGFKELGRGAFGRVFQA----FDEH-TGEAVAIKELKQRYASWEDCLNLREVKCLRK 56
D+ K LGRGAFG+V +A D+ T VA+K LK+ E + E+K L
Sbjct: 27 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 86
Query: 57 LNHS-NIVKL-KELIQNNNRLYLVFE-CMECNLYQLMAARD--------------RKLFS 99
+ H N+V L + L ++ E C NL + ++ + +
Sbjct: 87 IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLT 146
Query: 100 EPEIKAWLFQVFQGLSYMHQNGFFHRDLKPENLLVSQ-GIIKIADFGLAREIKSGPPYTN 158
+ + FQV +G+ ++ HRDL N+L+S+ ++KI DFGLAR+I P
Sbjct: 147 LEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDXVR 206
Query: 159 YVGSRW---YRAPEILLQSELYSSKADMWAMGAIMAELFTF-CPLFPGASEADQMYKICG 214
+R + APE + +Y+ ++D+W+ G ++ E+F+ +PG ++ C
Sbjct: 207 KGDARLPLKWMAPETIF-DRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE---FCR 262
Query: 215 VLGSPTMDSWADGLRQARAIKYQFPQLPRANLSALMPSASQDAISLFESLCSW--DPSKR 272
L T + RA Y P++ + L W +PS+R
Sbjct: 263 RLKEGT---------RMRAPDYTTPEMYQTMLDC------------------WHGEPSQR 295
Query: 273 PTAAEALQH 281
PT +E ++H
Sbjct: 296 PTFSELVEH 304
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 109/204 (53%), Gaps = 14/204 (6%)
Query: 8 KELGRGAFGRVFQAF-DEHTGEAVAIKELKQRYASWEDCLNLREVKCLRKLNHSNIVKLK 66
+ LG G FG V+ + + HT VA+K LKQ S D L E +++L H +V+L
Sbjct: 29 ERLGAGQFGEVWMGYYNGHT--KVAVKSLKQGSMS-PDAF-LAEANLMKQLQHQRLVRLY 84
Query: 67 ELIQNNNRLYLVFECME-CNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQNGFFHR 125
++ +Y++ E ME +L + + ++ Q+ +G++++ + + HR
Sbjct: 85 AVV-TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHR 143
Query: 126 DLKPENLLVSQGI-IKIADFGLAREIKSGPPYTNYVGSRW---YRAPEILLQSELYSSKA 181
DL+ N+LVS + KIADFGLAR I+ YT G+++ + APE + ++ K+
Sbjct: 144 DLRAANILVSDTLSCKIADFGLARLIEDN-EYTAREGAKFPIKWTAPEA-INYGTFTIKS 201
Query: 182 DMWAMGAIMAELFTFCPL-FPGAS 204
D+W+ G ++ E+ T + +PG +
Sbjct: 202 DVWSFGILLTEIVTHGRIPYPGMT 225
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 84/173 (48%), Gaps = 8/173 (4%)
Query: 30 VAIKELKQRYASWEDCLNLREVKCLRKLNHSNIVKLKELIQNNNRLYLVFECMECNLYQL 89
VAIK LK Y + L E + + +H NI++L+ ++ +V E ME
Sbjct: 80 VAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDT 139
Query: 90 MAARDRKLFSEPEIKAWLFQVFQGLSYMHQNGFFHRDLKPENLLVSQGII-KIADFGLAR 148
F+ ++ L V G+ Y+ G+ HRDL N+LV ++ K++DFGL+R
Sbjct: 140 FLRTHDGQFTIMQLVGMLRGVGAGMRYLSDLGYVHRDLAARNVLVDSNLVCKVSDFGLSR 199
Query: 149 EIKSGP--PYTNYVGS---RWYRAPEILLQSELYSSKADMWAMGAIMAELFTF 196
++ P YT G RW APE + +SS +D+W+ G +M E+ +
Sbjct: 200 VLEDDPDAAYTTTGGKIPIRW-TAPEA-IAFRTFSSASDVWSFGVVMWEVLAY 250
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 111/223 (49%), Gaps = 30/223 (13%)
Query: 2 DKYSGFKELGRGAFGRVFQA----FDEHTGE---AVAIKELKQRYASWEDCLNL-REVKC 53
DK + K LG G FG+V A D+ + VA+K LK A+ +D +L E++
Sbjct: 81 DKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDD-ATEKDLSDLVSEMEM 139
Query: 54 LRKL-NHSNIVKLKELIQNNNRLYLVFE-CMECNLYQLMAAR---------DRKLFSEPE 102
++ + H NI+ L + LY++ E + NL + + AR D E +
Sbjct: 140 MKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQ 199
Query: 103 IK-----AWLFQVFQGLSYMHQNGFFHRDLKPENLLVSQG-IIKIADFGLAREIKSGPPY 156
+ + +Q+ +G+ Y+ HRDL N+LV++ ++KIADFGLAR+I + Y
Sbjct: 200 MTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYY 259
Query: 157 TNYVGSRW---YRAPEILLQSELYSSKADMWAMGAIMAELFTF 196
R + APE L +Y+ ++D+W+ G +M E+FT
Sbjct: 260 KKTTNGRLPVKWMAPEALF-DRVYTHQSDVWSFGVLMWEIFTL 301
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 79/303 (26%), Positives = 135/303 (44%), Gaps = 26/303 (8%)
Query: 2 DKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLNLREVKCLRKLNHSN 61
D + ELG G G VF+ + +G +A K + +RE++ L + N
Sbjct: 68 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 127
Query: 62 IVKLKELIQNNNRLYLVFECMEC-NLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQ- 119
IV ++ + + E M+ +L Q++ R E + V +GL+Y+ +
Sbjct: 128 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR--IPEQILGKVSIAVIKGLTYLREK 185
Query: 120 NGFFHRDLKPENLLV-SQGIIKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQSELYS 178
+ HRD+KP N+LV S+G IK+ DFG++ ++ ++VG+R Y +PE LQ YS
Sbjct: 186 HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM-ANSFVGTRSYMSPE-RLQGTHYS 243
Query: 179 SKADMWAMGAIMAEL----FTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQARAI 234
++D+W+MG + E+ + P P A E + M+ C V G D
Sbjct: 244 VQSDIWSMGLSLVEMAVGRYPIPP--PDAKELELMFG-CQVEG--------DAAETPPRP 292
Query: 235 KYQFPQLPRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQ-HPFFKRCFYAPPH 293
+ L + + P A L + + + P K P+A +L+ F +C P
Sbjct: 293 RTPGRPLSSYGMDSRPPMA---IFELLDYIVNEPPPKLPSAVFSLEFQDFVNKCLIKNPA 349
Query: 294 IRS 296
R+
Sbjct: 350 ERA 352
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 70/237 (29%), Positives = 117/237 (49%), Gaps = 38/237 (16%)
Query: 8 KELGRGAFGRVFQAFDEHTG---------EAVAIKELKQRYASWEDCLNL-REVKCLRKL 57
K LG GAFG+V A E G VA+K LK A+ +D +L E++ ++ +
Sbjct: 34 KPLGEGAFGQVVLA--EAIGLDKDKPNRVTKVAVKMLKSD-ATEKDLSDLISEMEMMKMI 90
Query: 58 N-HSNIVKLKELIQNNNRLYLVFE-CMECNLYQLMAARD--------------RKLFSEP 101
H NI+ L + LY++ E + NL + + AR + S
Sbjct: 91 GKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSK 150
Query: 102 EIKAWLFQVFQGLSYMHQNGFFHRDLKPENLLVSQ-GIIKIADFGLAREIKSGPPYTNYV 160
++ + +QV +G+ Y+ HRDL N+LV++ ++KIADFGLAR+I Y
Sbjct: 151 DLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTT 210
Query: 161 GSRW---YRAPEILLQSELYSSKADMWAMGAIMAELFTF--CPLFPGASEADQMYKI 212
R + APE L +Y+ ++D+W+ G ++ E+FT P +PG ++++K+
Sbjct: 211 NGRLPVKWMAPEALF-DRIYTHQSDVWSFGVLLWEIFTLGGSP-YPGVP-VEELFKL 264
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 70/237 (29%), Positives = 117/237 (49%), Gaps = 38/237 (16%)
Query: 8 KELGRGAFGRVFQAFDEHTG---------EAVAIKELKQRYASWEDCLNL-REVKCLRKL 57
K LG GAFG+V A E G VA+K LK A+ +D +L E++ ++ +
Sbjct: 26 KPLGEGAFGQVVLA--EAIGLDKDKPNRVTKVAVKMLKSD-ATEKDLSDLISEMEMMKMI 82
Query: 58 N-HSNIVKLKELIQNNNRLYLVFE-CMECNLYQLMAARD--------------RKLFSEP 101
H NI+ L + LY++ E + NL + + AR + S
Sbjct: 83 GKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSK 142
Query: 102 EIKAWLFQVFQGLSYMHQNGFFHRDLKPENLLVSQ-GIIKIADFGLAREIKSGPPYTNYV 160
++ + +QV +G+ Y+ HRDL N+LV++ ++KIADFGLAR+I Y
Sbjct: 143 DLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTT 202
Query: 161 GSRW---YRAPEILLQSELYSSKADMWAMGAIMAELFTF--CPLFPGASEADQMYKI 212
R + APE L +Y+ ++D+W+ G ++ E+FT P +PG ++++K+
Sbjct: 203 NGRLPVKWMAPEALF-DRIYTHQSDVWSFGVLLWEIFTLGGSP-YPGVP-VEELFKL 256
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 70/237 (29%), Positives = 117/237 (49%), Gaps = 38/237 (16%)
Query: 8 KELGRGAFGRVFQAFDEHTG---------EAVAIKELKQRYASWEDCLNL-REVKCLRKL 57
K LG GAFG+V A E G VA+K LK A+ +D +L E++ ++ +
Sbjct: 27 KPLGEGAFGQVVLA--EAIGLDKDKPNRVTKVAVKMLKSD-ATEKDLSDLISEMEMMKMI 83
Query: 58 N-HSNIVKLKELIQNNNRLYLVFE-CMECNLYQLMAARD--------------RKLFSEP 101
H NI+ L + LY++ E + NL + + AR + S
Sbjct: 84 GKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSK 143
Query: 102 EIKAWLFQVFQGLSYMHQNGFFHRDLKPENLLVSQ-GIIKIADFGLAREIKSGPPYTNYV 160
++ + +QV +G+ Y+ HRDL N+LV++ ++KIADFGLAR+I Y
Sbjct: 144 DLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTT 203
Query: 161 GSRW---YRAPEILLQSELYSSKADMWAMGAIMAELFTF--CPLFPGASEADQMYKI 212
R + APE L +Y+ ++D+W+ G ++ E+FT P +PG ++++K+
Sbjct: 204 NGRLPVKWMAPEALF-DRIYTHQSDVWSFGVLLWEIFTLGGSP-YPGVP-VEELFKL 257
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 98/198 (49%), Gaps = 11/198 (5%)
Query: 8 KELGRGAFGRVFQAFDEHTGE---AVAIKELKQRYASWEDCLNLREVKCLRKLNHSNIVK 64
K +G G FG V + G+ VAIK LK Y + L E + + +H NI+
Sbjct: 20 KVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIH 79
Query: 65 LKELIQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQNGFFH 124
L+ ++ + ++ E ME ++ F+ ++ L + G+ Y+ + H
Sbjct: 80 LEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMKYLSDMSYVH 139
Query: 125 RDLKPENLLVSQGII-KIADFGLAREIKSGP--PYTNYVGS---RWYRAPEILLQSELYS 178
RDL N+LV+ ++ K++DFG++R ++ P YT G RW APE + + ++
Sbjct: 140 RDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRW-TAPEAIAYRK-FT 197
Query: 179 SKADMWAMGAIMAELFTF 196
S +D+W+ G +M E+ ++
Sbjct: 198 SASDVWSYGIVMWEVMSY 215
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 70/237 (29%), Positives = 117/237 (49%), Gaps = 38/237 (16%)
Query: 8 KELGRGAFGRVFQAFDEHTG---------EAVAIKELKQRYASWEDCLNL-REVKCLRKL 57
K LG GAFG+V A E G VA+K LK A+ +D +L E++ ++ +
Sbjct: 23 KPLGEGAFGQVVLA--EAIGLDKDKPNRVTKVAVKMLKSD-ATEKDLSDLISEMEMMKMI 79
Query: 58 N-HSNIVKLKELIQNNNRLYLVFE-CMECNLYQLMAARD--------------RKLFSEP 101
H NI+ L + LY++ E + NL + + AR + S
Sbjct: 80 GKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSK 139
Query: 102 EIKAWLFQVFQGLSYMHQNGFFHRDLKPENLLVSQ-GIIKIADFGLAREIKSGPPYTNYV 160
++ + +QV +G+ Y+ HRDL N+LV++ ++KIADFGLAR+I Y
Sbjct: 140 DLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTT 199
Query: 161 GSRW---YRAPEILLQSELYSSKADMWAMGAIMAELFTF--CPLFPGASEADQMYKI 212
R + APE L +Y+ ++D+W+ G ++ E+FT P +PG ++++K+
Sbjct: 200 NGRLPVKWMAPEALF-DRIYTHQSDVWSFGVLLWEIFTLGGSP-YPGVP-VEELFKL 253
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 80/309 (25%), Positives = 135/309 (43%), Gaps = 60/309 (19%)
Query: 2 DKYSGFKELGRGAFGRVFQA----FDEH-TGEAVAIKELKQRYASWEDCLNLREVKCLRK 56
D+ K LGRGAFG+V +A D+ T VA+K LK+ E + E+K L
Sbjct: 18 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 77
Query: 57 LNHS-NIVKL-KELIQNNNRLYLVFE-CMECNLYQLMAARD--------------RKLFS 99
+ H N+V L + L ++ E C NL + ++ + +
Sbjct: 78 IGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLT 137
Query: 100 EPEIKAWLFQVFQGLSYMHQNGFFHRDLKPENLLVSQ-GIIKIADFGLAREIKSGPPYTN 158
+ + FQV +G+ ++ HRDL N+L+S+ ++KI DFGLAR+I P
Sbjct: 138 LEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVR 197
Query: 159 YVGSRW---YRAPEILLQSELYSSKADMWAMGAIMAELFTF-CPLFPGASEADQMYKICG 214
+R + APE + +Y+ ++D+W+ G ++ E+F+ +PG ++ C
Sbjct: 198 KGDARLPLKWMAPETIF-DRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEF---CR 253
Query: 215 VLGSPTMDSWADGLRQARAIKYQFPQLPRANLSALMPSASQDAISLFESLCSW--DPSKR 272
L T + RA Y P++ + L W +PS+R
Sbjct: 254 RLKEGT---------RMRAPDYTTPEMYQTMLDC------------------WHGEPSQR 286
Query: 273 PTAAEALQH 281
PT +E ++H
Sbjct: 287 PTFSELVEH 295
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 70/237 (29%), Positives = 117/237 (49%), Gaps = 38/237 (16%)
Query: 8 KELGRGAFGRVFQAFDEHTG---------EAVAIKELKQRYASWEDCLNL-REVKCLRKL 57
K LG GAFG+V A E G VA+K LK A+ +D +L E++ ++ +
Sbjct: 34 KPLGEGAFGQVVLA--EAIGLDKDKPNRVTKVAVKMLKSD-ATEKDLSDLISEMEMMKMI 90
Query: 58 N-HSNIVKLKELIQNNNRLYLVFE-CMECNLYQLMAAR--------------DRKLFSEP 101
H NI+ L + LY++ E + NL + + AR + S
Sbjct: 91 GKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSK 150
Query: 102 EIKAWLFQVFQGLSYMHQNGFFHRDLKPENLLVSQ-GIIKIADFGLAREIKSGPPYTNYV 160
++ + +QV +G+ Y+ HRDL N+LV++ ++KIADFGLAR+I Y
Sbjct: 151 DLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTT 210
Query: 161 GSRW---YRAPEILLQSELYSSKADMWAMGAIMAELFTF--CPLFPGASEADQMYKI 212
R + APE L +Y+ ++D+W+ G ++ E+FT P +PG ++++K+
Sbjct: 211 NGRLPVKWMAPEALF-DRIYTHQSDVWSFGVLLWEIFTLGGSP-YPGVP-VEELFKL 264
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 78/300 (26%), Positives = 132/300 (44%), Gaps = 48/300 (16%)
Query: 2 DKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWE--DCLNLREVKCLRKLNH 59
+ + ++ LG+G FG V TG+ A K+L+++ + + L E + L K+N
Sbjct: 184 NTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNS 243
Query: 60 SNIVKLKELIQNNNRLYLVFECM-----ECNLYQLMAARDRKLFSEPEIKAWLF--QVFQ 112
+V L + + L LV M + ++Y + A PE +A + ++
Sbjct: 244 RFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQA------GFPEARAVFYAAEICC 297
Query: 113 GLSYMHQNGFFHRDLKPENLLVS-QGIIKIADFGLAREIKSGPPYTNYVGSRWYRAPEIL 171
GL +H+ +RDLKPEN+L+ G I+I+D GLA + G VG+ Y APE+
Sbjct: 298 GLEDLHRERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGRVGTVGYMAPEV- 356
Query: 172 LQSELYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQA 231
+++E Y+ D WA+G ++ E+ G S Q R+
Sbjct: 357 VKNERYTFSPDWWALGCLLYEMIA------GQSPFQQ--------------------RKK 390
Query: 232 RAIKYQFPQLPRANLSALMPSASQDAISLFESLCSWDPSKR-----PTAAEALQHPFFKR 286
+ + + +L + S A SL L DP++R +A E +HP FK+
Sbjct: 391 KIKREEVERLVKEVPEEYSERFSPQARSLCSQLLCKDPAERLGCRGGSAREVKEHPLFKK 450
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 70/237 (29%), Positives = 117/237 (49%), Gaps = 38/237 (16%)
Query: 8 KELGRGAFGRVFQAFDEHTG---------EAVAIKELKQRYASWEDCLNL-REVKCLRKL 57
K LG GAFG+V A E G VA+K LK A+ +D +L E++ ++ +
Sbjct: 75 KPLGEGAFGQVVLA--EAIGLDKDKPNRVTKVAVKMLKSD-ATEKDLSDLISEMEMMKMI 131
Query: 58 N-HSNIVKLKELIQNNNRLYLVFE-CMECNLYQLMAAR--------------DRKLFSEP 101
H NI+ L + LY++ E + NL + + AR + S
Sbjct: 132 GKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSK 191
Query: 102 EIKAWLFQVFQGLSYMHQNGFFHRDLKPENLLVSQ-GIIKIADFGLAREIKSGPPYTNYV 160
++ + +QV +G+ Y+ HRDL N+LV++ ++KIADFGLAR+I Y
Sbjct: 192 DLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTT 251
Query: 161 GSRW---YRAPEILLQSELYSSKADMWAMGAIMAELFTF--CPLFPGASEADQMYKI 212
R + APE L +Y+ ++D+W+ G ++ E+FT P +PG ++++K+
Sbjct: 252 NGRLPVKWMAPEALF-DRIYTHQSDVWSFGVLLWEIFTLGGSP-YPGVP-VEELFKL 305
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 109/204 (53%), Gaps = 14/204 (6%)
Query: 8 KELGRGAFGRVFQAF-DEHTGEAVAIKELKQRYASWEDCLNLREVKCLRKLNHSNIVKLK 66
+ LG G FG V+ + + HT VA+K LKQ S D L E +++L H +V+L
Sbjct: 25 ERLGAGQFGEVWMGYYNGHT--KVAVKSLKQGSMS-PDAF-LAEANLMKQLQHQRLVRLY 80
Query: 67 ELIQNNNRLYLVFECME-CNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQNGFFHR 125
++ +Y++ E ME +L + + ++ Q+ +G++++ + + HR
Sbjct: 81 AVV-TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHR 139
Query: 126 DLKPENLLVSQGI-IKIADFGLAREIKSGPPYTNYVGSRW---YRAPEILLQSELYSSKA 181
DL+ N+LVS + KIADFGLAR I+ YT G+++ + APE + ++ K+
Sbjct: 140 DLRAANILVSDTLSCKIADFGLARLIEDN-EYTAREGAKFPIKWTAPEA-INYGTFTIKS 197
Query: 182 DMWAMGAIMAELFTFCPL-FPGAS 204
D+W+ G ++ E+ T + +PG +
Sbjct: 198 DVWSFGILLTEIVTHGRIPYPGMT 221
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 78/300 (26%), Positives = 132/300 (44%), Gaps = 48/300 (16%)
Query: 2 DKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWE--DCLNLREVKCLRKLNH 59
+ + ++ LG+G FG V TG+ A K+L+++ + + L E + L K+N
Sbjct: 184 NTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNS 243
Query: 60 SNIVKLKELIQNNNRLYLVFECM-----ECNLYQLMAARDRKLFSEPEIKAWLF--QVFQ 112
+V L + + L LV M + ++Y + A PE +A + ++
Sbjct: 244 RFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQA------GFPEARAVFYAAEICC 297
Query: 113 GLSYMHQNGFFHRDLKPENLLVS-QGIIKIADFGLAREIKSGPPYTNYVGSRWYRAPEIL 171
GL +H+ +RDLKPEN+L+ G I+I+D GLA + G VG+ Y APE+
Sbjct: 298 GLEDLHRERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGRVGTVGYMAPEV- 356
Query: 172 LQSELYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQA 231
+++E Y+ D WA+G ++ E+ G S Q R+
Sbjct: 357 VKNERYTFSPDWWALGCLLYEMIA------GQSPFQQ--------------------RKK 390
Query: 232 RAIKYQFPQLPRANLSALMPSASQDAISLFESLCSWDPSKR-----PTAAEALQHPFFKR 286
+ + + +L + S A SL L DP++R +A E +HP FK+
Sbjct: 391 KIKREEVERLVKEVPEEYSERFSPQARSLCSQLLCKDPAERLGCRGGSAREVKEHPLFKK 450
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 100/202 (49%), Gaps = 10/202 (4%)
Query: 1 MDKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLNLREVKCLRKLNHS 60
+DK G E G GR+ + +VAIK LK Y + L E + + +H
Sbjct: 49 IDKVVGAGEFGEVCSGRLKLPSKKEI--SVAIKTLKVGYTEKQRRDFLGEASIMGQFDHP 106
Query: 61 NIVKLKELIQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQN 120
NI++L+ ++ + + +V E ME + F+ ++ L + G+ Y+
Sbjct: 107 NIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDM 166
Query: 121 GFFHRDLKPENLLVSQGII-KIADFGLAREIKSGP--PYTNYVGS---RWYRAPEILLQS 174
G HRDL N+L++ ++ K++DFGL+R ++ P YT G RW +PE +
Sbjct: 167 GAVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRW-TSPEAIAYR 225
Query: 175 ELYSSKADMWAMGAIMAELFTF 196
+ ++S +D+W+ G ++ E+ ++
Sbjct: 226 K-FTSASDVWSYGIVLWEVMSY 246
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 70/237 (29%), Positives = 117/237 (49%), Gaps = 38/237 (16%)
Query: 8 KELGRGAFGRVFQAFDEHTG---------EAVAIKELKQRYASWEDCLNL-REVKCLRKL 57
K LG GAFG+V A E G VA+K LK A+ +D +L E++ ++ +
Sbjct: 19 KPLGEGAFGQVVLA--EAIGLDKDKPNRVTKVAVKMLKSD-ATEKDLSDLISEMEMMKMI 75
Query: 58 N-HSNIVKLKELIQNNNRLYLVFE-CMECNLYQLMAARD--------------RKLFSEP 101
H NI+ L + LY++ E + NL + + AR + S
Sbjct: 76 GKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSK 135
Query: 102 EIKAWLFQVFQGLSYMHQNGFFHRDLKPENLLVSQ-GIIKIADFGLAREIKSGPPYTNYV 160
++ + +QV +G+ Y+ HRDL N+LV++ ++KIADFGLAR+I Y
Sbjct: 136 DLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTT 195
Query: 161 GSRW---YRAPEILLQSELYSSKADMWAMGAIMAELFTF--CPLFPGASEADQMYKI 212
R + APE L +Y+ ++D+W+ G ++ E+FT P +PG ++++K+
Sbjct: 196 NGRLPVKWMAPEALF-DRIYTHQSDVWSFGVLLWEIFTLGGSP-YPGVP-VEELFKL 249
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 109/204 (53%), Gaps = 14/204 (6%)
Query: 8 KELGRGAFGRVFQAF-DEHTGEAVAIKELKQRYASWEDCLNLREVKCLRKLNHSNIVKLK 66
+ LG G FG V+ + + HT VA+K LKQ S D L E +++L H +V+L
Sbjct: 24 ERLGAGQFGEVWMGYYNGHT--KVAVKSLKQGSMS-PDAF-LAEANLMKQLQHQRLVRLY 79
Query: 67 ELIQNNNRLYLVFECME-CNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQNGFFHR 125
++ +Y++ E ME +L + + ++ Q+ +G++++ + + HR
Sbjct: 80 AVV-TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHR 138
Query: 126 DLKPENLLVSQGI-IKIADFGLAREIKSGPPYTNYVGSRW---YRAPEILLQSELYSSKA 181
DL+ N+LVS + KIADFGLAR I+ YT G+++ + APE + ++ K+
Sbjct: 139 DLRAANILVSDTLSCKIADFGLARLIEDN-EYTAREGAKFPIKWTAPEA-INYGTFTIKS 196
Query: 182 DMWAMGAIMAELFTFCPL-FPGAS 204
D+W+ G ++ E+ T + +PG +
Sbjct: 197 DVWSFGILLTEIVTHGRIPYPGMT 220
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 111/223 (49%), Gaps = 30/223 (13%)
Query: 2 DKYSGFKELGRGAFGRVFQA----FDEHTGE---AVAIKELKQRYASWEDCLNL-REVKC 53
DK + K LG G FG+V A D+ + VA+K LK A+ +D +L E++
Sbjct: 22 DKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDD-ATEKDLSDLVSEMEM 80
Query: 54 LRKLN-HSNIVKLKELIQNNNRLYLVFE-CMECNLYQLMAAR---------DRKLFSEPE 102
++ + H NI+ L + LY++ E + NL + + AR D E +
Sbjct: 81 MKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQ 140
Query: 103 IK-----AWLFQVFQGLSYMHQNGFFHRDLKPENLLVSQG-IIKIADFGLAREIKSGPPY 156
+ + +Q+ +G+ Y+ HRDL N+LV++ ++KIADFGLAR+I + Y
Sbjct: 141 MTFKDLVSCTYQLARGMEYLASQKCIHRDLTARNVLVTENNVMKIADFGLARDINNIDYY 200
Query: 157 TNYVGSRW---YRAPEILLQSELYSSKADMWAMGAIMAELFTF 196
R + APE L +Y+ ++D+W+ G +M E+FT
Sbjct: 201 KKTTNGRLPVKWMAPEALF-DRVYTHQSDVWSFGVLMWEIFTL 242
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 108/204 (52%), Gaps = 14/204 (6%)
Query: 8 KELGRGAFGRVFQAF-DEHTGEAVAIKELKQRYASWEDCLNLREVKCLRKLNHSNIVKLK 66
+ LG G FG V+ + + HT VA+K LKQ S L E +++L H +V+L
Sbjct: 14 ERLGAGQFGEVWMGYYNGHT--KVAVKSLKQ--GSMSPDAFLAEANLMKQLQHQRLVRLY 69
Query: 67 ELIQNNNRLYLVFECME-CNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQNGFFHR 125
++ +Y++ E ME +L + + ++ Q+ +G++++ + + HR
Sbjct: 70 AVV-TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHR 128
Query: 126 DLKPENLLVSQGI-IKIADFGLAREIKSGPPYTNYVGSRW---YRAPEILLQSELYSSKA 181
DL+ N+LVS + KIADFGLAR I+ YT G+++ + APE + ++ K+
Sbjct: 129 DLRAANILVSDTLSCKIADFGLARLIEDN-EYTAREGAKFPIKWTAPEA-INYGTFTIKS 186
Query: 182 DMWAMGAIMAELFTFCPL-FPGAS 204
D+W+ G ++ E+ T + +PG +
Sbjct: 187 DVWSFGILLTEIVTHGRIPYPGMT 210
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 111/223 (49%), Gaps = 30/223 (13%)
Query: 2 DKYSGFKELGRGAFGRVFQA----FDEHTGE---AVAIKELKQRYASWEDCLNL-REVKC 53
DK + K LG G FG+V A D+ + VA+K LK A+ +D +L E++
Sbjct: 27 DKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDD-ATEKDLSDLVSEMEM 85
Query: 54 LRKLN-HSNIVKLKELIQNNNRLYLVFE-CMECNLYQLMAAR---------DRKLFSEPE 102
++ + H NI+ L + LY++ E + NL + + AR D E +
Sbjct: 86 MKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQ 145
Query: 103 IK-----AWLFQVFQGLSYMHQNGFFHRDLKPENLLVSQG-IIKIADFGLAREIKSGPPY 156
+ + +Q+ +G+ Y+ HRDL N+LV++ ++KIADFGLAR+I + Y
Sbjct: 146 MTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYY 205
Query: 157 TNYVGSRW---YRAPEILLQSELYSSKADMWAMGAIMAELFTF 196
R + APE L +Y+ ++D+W+ G +M E+FT
Sbjct: 206 KKTTNGRLPVKWMAPEALF-DRVYTHQSDVWSFGVLMWEIFTL 247
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 109/204 (53%), Gaps = 14/204 (6%)
Query: 8 KELGRGAFGRVFQAF-DEHTGEAVAIKELKQRYASWEDCLNLREVKCLRKLNHSNIVKLK 66
+ LG G FG V+ + + HT VA+K LKQ S D L E +++L H +V+L
Sbjct: 19 ERLGAGQFGEVWMGYYNGHT--KVAVKSLKQGSMS-PDAF-LAEANLMKQLQHQRLVRLY 74
Query: 67 ELIQNNNRLYLVFECME-CNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQNGFFHR 125
++ +Y++ E ME +L + + ++ Q+ +G++++ + + HR
Sbjct: 75 AVV-TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHR 133
Query: 126 DLKPENLLVSQGI-IKIADFGLAREIKSGPPYTNYVGSRW---YRAPEILLQSELYSSKA 181
DL+ N+LVS + KIADFGLAR I+ YT G+++ + APE + ++ K+
Sbjct: 134 DLRAANILVSDTLSCKIADFGLARLIEDN-EYTAREGAKFPIKWTAPEA-INYGTFTIKS 191
Query: 182 DMWAMGAIMAELFTFCPL-FPGAS 204
D+W+ G ++ E+ T + +PG +
Sbjct: 192 DVWSFGILLTEIVTHGRIPYPGMT 215
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 81/309 (26%), Positives = 131/309 (42%), Gaps = 62/309 (20%)
Query: 8 KELGRGAFGRV-FQAFDEHTGEAVAIKELKQRYASWEDCLNLREVKCLRKLN-HSNIVKL 65
K LG G+ G V FQ G VA+K + + + L E+K L + + H N+++
Sbjct: 21 KILGYGSSGTVVFQG--SFQGRPVAVKRMLIDFCD----IALMEIKLLTESDDHPNVIRY 74
Query: 66 KELIQNNNRLYLVFECMECNLYQLMAARDR-----KLFSEPEIKAWLFQVFQGLSYMHQN 120
+ LY+ E NL L+ +++ KL E + L Q+ G++++H
Sbjct: 75 YCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSL 134
Query: 121 GFFHRDLKPENLLVSQGI--------------IKIADFGLAREIKSGPP-----YTNYVG 161
HRDLKP+N+LVS I I+DFGL +++ SG N G
Sbjct: 135 KIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQSSFRTNLNNPSG 194
Query: 162 SRWYRAPEILLQSELYSSK------ADMWAMGAIMAELFTFCPLFPGASEADQMYKICGV 215
+ +RAPE+L +S +K D+++MG + Y I
Sbjct: 195 TSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCV-------------------FYYILSK 235
Query: 216 LGSPTMDSWADGLRQARAIKYQFPQLPRANLSALMPSASQDAISLFESLCSWDPSKRPTA 275
P D ++ R I + ++ + +L+ A+ L + DP KRPTA
Sbjct: 236 GKHPFGDKYSRESNIIRGI-FSLDEMKCLHDRSLIAEATD----LISQMIDHDPLKRPTA 290
Query: 276 AEALQHPFF 284
+ L+HP F
Sbjct: 291 MKVLRHPLF 299
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 111/223 (49%), Gaps = 30/223 (13%)
Query: 2 DKYSGFKELGRGAFGRVFQA----FDEHTGE---AVAIKELKQRYASWEDCLNL-REVKC 53
DK + K LG G FG+V A D+ + VA+K LK A+ +D +L E++
Sbjct: 24 DKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDD-ATEKDLSDLVSEMEM 82
Query: 54 LRKLN-HSNIVKLKELIQNNNRLYLVFE-CMECNLYQLMAAR---------DRKLFSEPE 102
++ + H NI+ L + LY++ E + NL + + AR D E +
Sbjct: 83 MKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQ 142
Query: 103 IK-----AWLFQVFQGLSYMHQNGFFHRDLKPENLLVSQG-IIKIADFGLAREIKSGPPY 156
+ + +Q+ +G+ Y+ HRDL N+LV++ ++KIADFGLAR+I + Y
Sbjct: 143 MTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYY 202
Query: 157 TNYVGSRW---YRAPEILLQSELYSSKADMWAMGAIMAELFTF 196
R + APE L +Y+ ++D+W+ G +M E+FT
Sbjct: 203 KKTTNGRLPVKWMAPEALF-DRVYTHQSDVWSFGVLMWEIFTL 244
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 111/229 (48%), Gaps = 25/229 (10%)
Query: 8 KELGRGAFGRVFQAFDEHTGE-----AVAIKELKQRYASWEDCLNLREVKCLRKLN-HSN 61
K LG GAFG+V +A G+ VA+K LK + E + E+K + L H N
Sbjct: 52 KTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHEN 111
Query: 62 IVKLKELIQNNNRLYLVFE-CMECNLYQLMAARDRKLFSEP------------EIKAWLF 108
IV L + + ++ E C +L + + R L ++P ++ +
Sbjct: 112 IVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTLSTRDLLHFSS 171
Query: 109 QVFQGLSYMHQNGFFHRDLKPENLLVSQG-IIKIADFGLAREIKSGPPYTNYVGSRW--- 164
QV QG++++ HRD+ N+L++ G + KI DFGLAR+I + Y +R
Sbjct: 172 QVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVK 231
Query: 165 YRAPEILLQSELYSSKADMWAMGAIMAELFTF-CPLFPGASEADQMYKI 212
+ APE + +Y+ ++D+W+ G ++ E+F+ +PG + YK+
Sbjct: 232 WMAPESIFDC-VYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKL 279
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 111/229 (48%), Gaps = 25/229 (10%)
Query: 8 KELGRGAFGRVFQAFDEHTGE-----AVAIKELKQRYASWEDCLNLREVKCLRKLN-HSN 61
K LG GAFG+V +A G+ VA+K LK + E + E+K + L H N
Sbjct: 52 KTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHEN 111
Query: 62 IVKLKELIQNNNRLYLVFE-CMECNLYQLMAARDRKLFSEP------------EIKAWLF 108
IV L + + ++ E C +L + + R L ++P ++ +
Sbjct: 112 IVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSS 171
Query: 109 QVFQGLSYMHQNGFFHRDLKPENLLVSQG-IIKIADFGLAREIKSGPPYTNYVGSRW--- 164
QV QG++++ HRD+ N+L++ G + KI DFGLAR+I + Y +R
Sbjct: 172 QVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVK 231
Query: 165 YRAPEILLQSELYSSKADMWAMGAIMAELFTF-CPLFPGASEADQMYKI 212
+ APE + +Y+ ++D+W+ G ++ E+F+ +PG + YK+
Sbjct: 232 WMAPESIFDC-VYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKL 279
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 111/223 (49%), Gaps = 30/223 (13%)
Query: 2 DKYSGFKELGRGAFGRVFQA----FDEHTGE---AVAIKELKQRYASWEDCLNL-REVKC 53
DK + K LG GAFG+V A D+ + VA+K LK A+ +D +L E++
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDD-ATEKDLSDLVSEMEM 93
Query: 54 LRKLN-HSNIVKLKELIQNNNRLYLVFE-CMECNLYQLMAAR---------DRKLFSEPE 102
++ + H NI+ L + LY++ E + NL + + AR D E +
Sbjct: 94 MKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQ 153
Query: 103 IK-----AWLFQVFQGLSYMHQNGFFHRDLKPENLLVSQG-IIKIADFGLAREIKSGPPY 156
+ + +Q+ +G+ Y+ HRDL N+LV++ ++KIADFGLAR+I +
Sbjct: 154 MTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXX 213
Query: 157 TNYVGSRW---YRAPEILLQSELYSSKADMWAMGAIMAELFTF 196
R + APE L +Y+ ++D+W+ G +M E+FT
Sbjct: 214 KKTTNGRLPVKWMAPEALF-DRVYTHQSDVWSFGVLMWEIFTL 255
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 81/309 (26%), Positives = 131/309 (42%), Gaps = 62/309 (20%)
Query: 8 KELGRGAFGRV-FQAFDEHTGEAVAIKELKQRYASWEDCLNLREVKCLRKLN-HSNIVKL 65
K LG G+ G V FQ G VA+K + + + L E+K L + + H N+++
Sbjct: 21 KILGYGSSGTVVFQG--SFQGRPVAVKRMLIDFCD----IALMEIKLLTESDDHPNVIRY 74
Query: 66 KELIQNNNRLYLVFECMECNLYQLMAARDR-----KLFSEPEIKAWLFQVFQGLSYMHQN 120
+ LY+ E NL L+ +++ KL E + L Q+ G++++H
Sbjct: 75 YCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSL 134
Query: 121 GFFHRDLKPENLLVSQGI--------------IKIADFGLAREIKSGPP-----YTNYVG 161
HRDLKP+N+LVS I I+DFGL +++ SG N G
Sbjct: 135 KIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXNLNNPSG 194
Query: 162 SRWYRAPEILLQSELYSSK------ADMWAMGAIMAELFTFCPLFPGASEADQMYKICGV 215
+ +RAPE+L +S +K D+++MG + Y I
Sbjct: 195 TSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCV-------------------FYYILSK 235
Query: 216 LGSPTMDSWADGLRQARAIKYQFPQLPRANLSALMPSASQDAISLFESLCSWDPSKRPTA 275
P D ++ R I + ++ + +L+ A+ L + DP KRPTA
Sbjct: 236 GKHPFGDKYSRESNIIRGI-FSLDEMKCLHDRSLIAEATD----LISQMIDHDPLKRPTA 290
Query: 276 AEALQHPFF 284
+ L+HP F
Sbjct: 291 MKVLRHPLF 299
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 111/223 (49%), Gaps = 30/223 (13%)
Query: 2 DKYSGFKELGRGAFGRVFQA----FDEHTGE---AVAIKELKQRYASWEDCLNL-REVKC 53
DK + K LG GAFG+V A D+ + VA+K LK A+ +D +L E++
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDD-ATEKDLSDLVSEMEM 93
Query: 54 LRKLN-HSNIVKLKELIQNNNRLYLVFE-CMECNLYQLMAAR---------DRKLFSEPE 102
++ + H NI+ L + LY++ E + NL + + AR D E +
Sbjct: 94 MKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQ 153
Query: 103 IK-----AWLFQVFQGLSYMHQNGFFHRDLKPENLLVSQG-IIKIADFGLAREIKSGPPY 156
+ + +Q+ +G+ Y+ HRDL N+LV++ ++KIADFGLAR+I +
Sbjct: 154 MTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXX 213
Query: 157 TNYVGSRW---YRAPEILLQSELYSSKADMWAMGAIMAELFTF 196
R + APE L +Y+ ++D+W+ G +M E+FT
Sbjct: 214 KKTTNGRLPVKWMAPEALF-DRVYTHQSDVWSFGVLMWEIFTL 255
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 80/305 (26%), Positives = 130/305 (42%), Gaps = 58/305 (19%)
Query: 8 KELGRGAFGRV-FQAFDEHTGEAVAIKELKQRYASWEDCLNLREVKCLRKLN-HSNIVKL 65
K LG G+ G V FQ G VA+K + + + L E+K L + + H N+++
Sbjct: 39 KILGYGSSGTVVFQG--SFQGRPVAVKRMLIDFCD----IALMEIKLLTESDDHPNVIRY 92
Query: 66 KELIQNNNRLYLVFECMECNLYQLMAARDR-----KLFSEPEIKAWLFQVFQGLSYMHQN 120
+ LY+ E NL L+ +++ KL E + L Q+ G++++H
Sbjct: 93 YCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSL 152
Query: 121 GFFHRDLKPENLLVSQGI--------------IKIADFGLAREIKSGPP-----YTNYVG 161
HRDLKP+N+LVS I I+DFGL +++ SG N G
Sbjct: 153 KIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXNLNNPSG 212
Query: 162 SRWYRAPEILLQS--ELYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSP 219
+ +RAPE+L +S + D+++MG + Y I P
Sbjct: 213 TSGWRAPELLEESTKRRLTRSIDIFSMGCV-------------------FYYILSKGKHP 253
Query: 220 TMDSWADGLRQARAIKYQFPQLPRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEAL 279
D ++ R I + ++ + +L+ A+ L + DP KRPTA + L
Sbjct: 254 FGDKYSRESNIIRGI-FSLDEMKCLHDRSLIAEATD----LISQMIDHDPLKRPTAMKVL 308
Query: 280 QHPFF 284
+HP F
Sbjct: 309 RHPLF 313
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 97/202 (48%), Gaps = 20/202 (9%)
Query: 10 LGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLNLREVKCLRKLNHSNIVKLKELI 69
LG+G FG+ + TGE + +KEL R+ L+EVK +R L H N++K ++
Sbjct: 18 LGKGCFGQAIKVTHRETGEVMVMKEL-IRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVL 76
Query: 70 QNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQNGFFHRDLKP 129
+ RL + E ++ + + + + ++ + G++Y+H HRDL
Sbjct: 77 YKDKRLNFITEYIKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLHSMNIIHRDLNS 136
Query: 130 ENLLVSQGI-IKIADFGLAR---EIKSGPP-------------YTNYVGSRWYRAPEILL 172
N LV + + +ADFGLAR + K+ P YT VG+ ++ APE ++
Sbjct: 137 HNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYT-VVGNPYWMAPE-MI 194
Query: 173 QSELYSSKADMWAMGAIMAELF 194
Y K D+++ G ++ E+
Sbjct: 195 NGRSYDEKVDVFSFGIVLCEII 216
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 111/223 (49%), Gaps = 30/223 (13%)
Query: 2 DKYSGFKELGRGAFGRVFQA----FDEHTGE---AVAIKELKQRYASWEDCLNL-REVKC 53
DK + K LG GAFG+V A D+ + VA+K LK A+ +D +L E++
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDD-ATEKDLSDLVSEMEM 93
Query: 54 LRKLN-HSNIVKLKELIQNNNRLYLVFE-CMECNLYQLMAAR---------DRKLFSEPE 102
++ + H NI+ L + LY++ + NL + + AR D E +
Sbjct: 94 MKMIGKHKNIINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINRVPEEQ 153
Query: 103 IK-----AWLFQVFQGLSYMHQNGFFHRDLKPENLLVSQG-IIKIADFGLAREIKSGPPY 156
+ + +Q+ +G+ Y+ HRDL N+LV++ ++KIADFGLAR+I + Y
Sbjct: 154 MTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYY 213
Query: 157 TNYVGSRW---YRAPEILLQSELYSSKADMWAMGAIMAELFTF 196
R + APE L +Y+ ++D+W+ G +M E+FT
Sbjct: 214 KKTTNGRLPVKWMAPEALF-DRVYTHQSDVWSFGVLMWEIFTL 255
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 78/303 (25%), Positives = 135/303 (44%), Gaps = 26/303 (8%)
Query: 2 DKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLNLREVKCLRKLNHSN 61
D + ELG G G VF+ + +G +A K + +RE++ L + N
Sbjct: 33 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 92
Query: 62 IVKLKELIQNNNRLYLVFECMEC-NLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQ- 119
IV ++ + + E M+ +L Q++ R E + V +GL+Y+ +
Sbjct: 93 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR--IPEQILGKVSIAVIKGLTYLREK 150
Query: 120 NGFFHRDLKPENLLV-SQGIIKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQSELYS 178
+ HRD+KP N+LV S+G IK+ DFG++ ++ ++VG+R Y +PE LQ YS
Sbjct: 151 HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMA-NSFVGTRSYMSPE-RLQGTHYS 208
Query: 179 SKADMWAMGAIMAEL----FTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQARAI 234
++D+W+MG + E+ + P P A E + M+ C V G D
Sbjct: 209 VQSDIWSMGLSLVEMAVGRYPIPP--PDAKELELMFG-CQVEG--------DAAETPPRP 257
Query: 235 KYQFPQLPRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQ-HPFFKRCFYAPPH 293
+ L + + + P A L + + + P K P+ +L+ F +C P
Sbjct: 258 RTPGRPLNKFGMDSRPPMA---IFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPA 314
Query: 294 IRS 296
R+
Sbjct: 315 ERA 317
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 80/305 (26%), Positives = 130/305 (42%), Gaps = 58/305 (19%)
Query: 8 KELGRGAFGRV-FQAFDEHTGEAVAIKELKQRYASWEDCLNLREVKCLRKLN-HSNIVKL 65
K LG G+ G V FQ G VA+K + + + L E+K L + + H N+++
Sbjct: 39 KILGYGSSGTVVFQG--SFQGRPVAVKRMLIDFCD----IALMEIKLLTESDDHPNVIRY 92
Query: 66 KELIQNNNRLYLVFECMECNLYQLMAARDR-----KLFSEPEIKAWLFQVFQGLSYMHQN 120
+ LY+ E NL L+ +++ KL E + L Q+ G++++H
Sbjct: 93 YCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSL 152
Query: 121 GFFHRDLKPENLLVSQGI--------------IKIADFGLAREIKSGPP-----YTNYVG 161
HRDLKP+N+LVS I I+DFGL +++ SG N G
Sbjct: 153 KIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXNLNNPSG 212
Query: 162 SRWYRAPEILLQS--ELYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSP 219
+ +RAPE+L +S + D+++MG + Y I P
Sbjct: 213 TSGWRAPELLEESTKRRLTRSIDIFSMGCV-------------------FYYILSKGKHP 253
Query: 220 TMDSWADGLRQARAIKYQFPQLPRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEAL 279
D ++ R I + ++ + +L+ A+ L + DP KRPTA + L
Sbjct: 254 FGDKYSRESNIIRGI-FSLDEMKCLHDRSLIAEATD----LISQMIDHDPLKRPTAMKVL 308
Query: 280 QHPFF 284
+HP F
Sbjct: 309 RHPLF 313
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 98/195 (50%), Gaps = 14/195 (7%)
Query: 10 LGRGAFGRVFQAFDEHTGEAVAIKEL-KQRYASWEDCLNLR----EVKCLRKLNH--SNI 62
LG G FG V+ VAIK + K R + W + N EV L+K++ S +
Sbjct: 51 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 110
Query: 63 VKLKELIQNNNRLYLVFECMEC--NLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQN 120
++L + + + L+ E E +L+ + +R E +++ +QV + + + H
Sbjct: 111 IRLLDWFERPDSFVLILERPEPVQDLFDFIT--ERGALQEELARSFFWQVLEAVRHCHNC 168
Query: 121 GFFHRDLKPENLLV--SQGIIKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQSELYS 178
G HRD+K EN+L+ ++G +K+ DFG +K YT++ G+R Y PE + +
Sbjct: 169 GVLHRDIKDENILIDLNRGELKLIDFGSGALLKD-TVYTDFDGTRVYSPPEWIRYHRYHG 227
Query: 179 SKADMWAMGAIMAEL 193
A +W++G ++ ++
Sbjct: 228 RSAAVWSLGILLYDM 242
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 78/303 (25%), Positives = 134/303 (44%), Gaps = 26/303 (8%)
Query: 2 DKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLNLREVKCLRKLNHSN 61
D + ELG G G VF+ + +G +A K + +RE++ L + N
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 65
Query: 62 IVKLKELIQNNNRLYLVFECMEC-NLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQ- 119
IV ++ + + E M+ +L Q++ R E + V +GL+Y+ +
Sbjct: 66 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR--IPEQILGKVSIAVIKGLTYLREK 123
Query: 120 NGFFHRDLKPENLLV-SQGIIKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQSELYS 178
+ HRD+KP N+LV S+G IK+ DFG++ ++ ++VG+R Y +PE LQ YS
Sbjct: 124 HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMA-NSFVGTRSYMSPE-RLQGTHYS 181
Query: 179 SKADMWAMGAIMAEL----FTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQARAI 234
++D+W+MG + E+ + P P A E + M+ C V G D
Sbjct: 182 VQSDIWSMGLSLVEMAVGRYPIPP--PDAKELELMFG-CQVEG--------DAAETPPRP 230
Query: 235 KYQFPQLPRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQ-HPFFKRCFYAPPH 293
+ L + + P A L + + + P K P+ +L+ F +C P
Sbjct: 231 RTPGRPLSSYGMDSRPPMA---IFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPA 287
Query: 294 IRS 296
R+
Sbjct: 288 ERA 290
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 78/303 (25%), Positives = 134/303 (44%), Gaps = 26/303 (8%)
Query: 2 DKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLNLREVKCLRKLNHSN 61
D + ELG G G VF+ + +G +A K + +RE++ L + N
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 65
Query: 62 IVKLKELIQNNNRLYLVFECMEC-NLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQ- 119
IV ++ + + E M+ +L Q++ R E + V +GL+Y+ +
Sbjct: 66 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR--IPEQILGKVSIAVIKGLTYLREK 123
Query: 120 NGFFHRDLKPENLLV-SQGIIKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQSELYS 178
+ HRD+KP N+LV S+G IK+ DFG++ ++ ++VG+R Y +PE LQ YS
Sbjct: 124 HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMA-NSFVGTRSYMSPE-RLQGTHYS 181
Query: 179 SKADMWAMGAIMAEL----FTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQARAI 234
++D+W+MG + E+ + P P A E + M+ C V G D
Sbjct: 182 VQSDIWSMGLSLVEMAVGRYPIPP--PDAKELELMFG-CQVEG--------DAAETPPRP 230
Query: 235 KYQFPQLPRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQ-HPFFKRCFYAPPH 293
+ L + + P A L + + + P K P+ +L+ F +C P
Sbjct: 231 RTPGRPLSSYGMDSRPPMA---IFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPA 287
Query: 294 IRS 296
R+
Sbjct: 288 ERA 290
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 98/195 (50%), Gaps = 14/195 (7%)
Query: 10 LGRGAFGRVFQAFDEHTGEAVAIKEL-KQRYASWEDCLNLR----EVKCLRKLNH--SNI 62
LG G FG V+ VAIK + K R + W + N EV L+K++ S +
Sbjct: 64 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 123
Query: 63 VKLKELIQNNNRLYLVFECMEC--NLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQN 120
++L + + + L+ E E +L+ + +R E +++ +QV + + + H
Sbjct: 124 IRLLDWFERPDSFVLILERPEPVQDLFDFIT--ERGALQEELARSFFWQVLEAVRHCHNC 181
Query: 121 GFFHRDLKPENLLV--SQGIIKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQSELYS 178
G HRD+K EN+L+ ++G +K+ DFG +K YT++ G+R Y PE + +
Sbjct: 182 GVLHRDIKDENILIDLNRGELKLIDFGSGALLKD-TVYTDFDGTRVYSPPEWIRYHRYHG 240
Query: 179 SKADMWAMGAIMAEL 193
A +W++G ++ ++
Sbjct: 241 RSAAVWSLGILLYDM 255
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 98/195 (50%), Gaps = 14/195 (7%)
Query: 10 LGRGAFGRVFQAFDEHTGEAVAIKEL-KQRYASWEDCLNLR----EVKCLRKLNH--SNI 62
LG G FG V+ VAIK + K R + W + N EV L+K++ S +
Sbjct: 31 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 90
Query: 63 VKLKELIQNNNRLYLVFECMEC--NLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQN 120
++L + + + L+ E E +L+ + +R E +++ +QV + + + H
Sbjct: 91 IRLLDWFERPDSFVLILERPEPVQDLFDFIT--ERGALQEELARSFFWQVLEAVRHCHNC 148
Query: 121 GFFHRDLKPENLLV--SQGIIKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQSELYS 178
G HRD+K EN+L+ ++G +K+ DFG +K YT++ G+R Y PE + +
Sbjct: 149 GVLHRDIKDENILIDLNRGELKLIDFGSGALLKD-TVYTDFDGTRVYSPPEWIRYHRYHG 207
Query: 179 SKADMWAMGAIMAEL 193
A +W++G ++ ++
Sbjct: 208 RSAAVWSLGILLYDM 222
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 98/195 (50%), Gaps = 14/195 (7%)
Query: 10 LGRGAFGRVFQAFDEHTGEAVAIKEL-KQRYASWEDCLNLR----EVKCLRKLNH--SNI 62
LG G FG V+ VAIK + K R + W + N EV L+K++ S +
Sbjct: 45 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 104
Query: 63 VKLKELIQNNNRLYLVFECMEC--NLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQN 120
++L + + + L+ E E +L+ + +R E +++ +QV + + + H
Sbjct: 105 IRLLDWFERPDSFVLILERPEPVQDLFDFIT--ERGALQEELARSFFWQVLEAVRHCHNC 162
Query: 121 GFFHRDLKPENLLV--SQGIIKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQSELYS 178
G HRD+K EN+L+ ++G +K+ DFG +K YT++ G+R Y PE + +
Sbjct: 163 GVLHRDIKDENILIDLNRGELKLIDFGSGALLKD-TVYTDFDGTRVYSPPEWIRYHRYHG 221
Query: 179 SKADMWAMGAIMAEL 193
A +W++G ++ ++
Sbjct: 222 RSAAVWSLGILLYDM 236
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 98/195 (50%), Gaps = 14/195 (7%)
Query: 10 LGRGAFGRVFQAFDEHTGEAVAIKEL-KQRYASWEDCLNLR----EVKCLRKLNH--SNI 62
LG G FG V+ VAIK + K R + W + N EV L+K++ S +
Sbjct: 44 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 103
Query: 63 VKLKELIQNNNRLYLVFECMEC--NLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQN 120
++L + + + L+ E E +L+ + +R E +++ +QV + + + H
Sbjct: 104 IRLLDWFERPDSFVLILERPEPVQDLFDFIT--ERGALQEELARSFFWQVLEAVRHCHNC 161
Query: 121 GFFHRDLKPENLLV--SQGIIKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQSELYS 178
G HRD+K EN+L+ ++G +K+ DFG +K YT++ G+R Y PE + +
Sbjct: 162 GVLHRDIKDENILIDLNRGELKLIDFGSGALLKD-TVYTDFDGTRVYSPPEWIRYHRYHG 220
Query: 179 SKADMWAMGAIMAEL 193
A +W++G ++ ++
Sbjct: 221 RSAAVWSLGILLYDM 235
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 98/195 (50%), Gaps = 14/195 (7%)
Query: 10 LGRGAFGRVFQAFDEHTGEAVAIKEL-KQRYASWEDCLNLR----EVKCLRKLNH--SNI 62
LG G FG V+ VAIK + K R + W + N EV L+K++ S +
Sbjct: 45 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 104
Query: 63 VKLKELIQNNNRLYLVFECMEC--NLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQN 120
++L + + + L+ E E +L+ + +R E +++ +QV + + + H
Sbjct: 105 IRLLDWFERPDSFVLILERPEPVQDLFDFIT--ERGALQEELARSFFWQVLEAVRHCHNC 162
Query: 121 GFFHRDLKPENLLV--SQGIIKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQSELYS 178
G HRD+K EN+L+ ++G +K+ DFG +K YT++ G+R Y PE + +
Sbjct: 163 GVLHRDIKDENILIDLNRGELKLIDFGSGALLKD-TVYTDFDGTRVYSPPEWIRYHRYHG 221
Query: 179 SKADMWAMGAIMAEL 193
A +W++G ++ ++
Sbjct: 222 RSAAVWSLGILLYDM 236
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 98/195 (50%), Gaps = 14/195 (7%)
Query: 10 LGRGAFGRVFQAFDEHTGEAVAIKEL-KQRYASWEDCLNLR----EVKCLRKLNH--SNI 62
LG G FG V+ VAIK + K R + W + N EV L+K++ S +
Sbjct: 32 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 91
Query: 63 VKLKELIQNNNRLYLVFECMEC--NLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQN 120
++L + + + L+ E E +L+ + +R E +++ +QV + + + H
Sbjct: 92 IRLLDWFERPDSFVLILERPEPVQDLFDFIT--ERGALQEELARSFFWQVLEAVRHCHNC 149
Query: 121 GFFHRDLKPENLLV--SQGIIKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQSELYS 178
G HRD+K EN+L+ ++G +K+ DFG +K YT++ G+R Y PE + +
Sbjct: 150 GVLHRDIKDENILIDLNRGELKLIDFGSGALLKD-TVYTDFDGTRVYSPPEWIRYHRYHG 208
Query: 179 SKADMWAMGAIMAEL 193
A +W++G ++ ++
Sbjct: 209 RSAAVWSLGILLYDM 223
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 98/195 (50%), Gaps = 14/195 (7%)
Query: 10 LGRGAFGRVFQAFDEHTGEAVAIKEL-KQRYASWEDCLNLR----EVKCLRKLNH--SNI 62
LG G FG V+ VAIK + K R + W + N EV L+K++ S +
Sbjct: 45 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 104
Query: 63 VKLKELIQNNNRLYLVFECMEC--NLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQN 120
++L + + + L+ E E +L+ + +R E +++ +QV + + + H
Sbjct: 105 IRLLDWFERPDSFVLILERPEPVQDLFDFIT--ERGALQEELARSFFWQVLEAVRHCHNC 162
Query: 121 GFFHRDLKPENLLV--SQGIIKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQSELYS 178
G HRD+K EN+L+ ++G +K+ DFG +K YT++ G+R Y PE + +
Sbjct: 163 GVLHRDIKDENILIDLNRGELKLIDFGSGALLKD-TVYTDFDGTRVYSPPEWIRYHRYHG 221
Query: 179 SKADMWAMGAIMAEL 193
A +W++G ++ ++
Sbjct: 222 RSAAVWSLGILLYDM 236
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 98/195 (50%), Gaps = 14/195 (7%)
Query: 10 LGRGAFGRVFQAFDEHTGEAVAIKEL-KQRYASWEDCLNLR----EVKCLRKLNH--SNI 62
LG G FG V+ VAIK + K R + W + N EV L+K++ S +
Sbjct: 32 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 91
Query: 63 VKLKELIQNNNRLYLVFECMEC--NLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQN 120
++L + + + L+ E E +L+ + +R E +++ +QV + + + H
Sbjct: 92 IRLLDWFERPDSFVLILERPEPVQDLFDFIT--ERGALQEELARSFFWQVLEAVRHCHNC 149
Query: 121 GFFHRDLKPENLLV--SQGIIKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQSELYS 178
G HRD+K EN+L+ ++G +K+ DFG +K YT++ G+R Y PE + +
Sbjct: 150 GVLHRDIKDENILIDLNRGELKLIDFGSGALLKD-TVYTDFDGTRVYSPPEWIRYHRYHG 208
Query: 179 SKADMWAMGAIMAEL 193
A +W++G ++ ++
Sbjct: 209 RSAAVWSLGILLYDM 223
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 98/195 (50%), Gaps = 14/195 (7%)
Query: 10 LGRGAFGRVFQAFDEHTGEAVAIKEL-KQRYASWEDCLNLR----EVKCLRKLNH--SNI 62
LG G FG V+ VAIK + K R + W + N EV L+K++ S +
Sbjct: 31 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 90
Query: 63 VKLKELIQNNNRLYLVFECMEC--NLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQN 120
++L + + + L+ E E +L+ + +R E +++ +QV + + + H
Sbjct: 91 IRLLDWFERPDSFVLILERPEPVQDLFDFIT--ERGALQEELARSFFWQVLEAVRHCHNC 148
Query: 121 GFFHRDLKPENLLV--SQGIIKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQSELYS 178
G HRD+K EN+L+ ++G +K+ DFG +K YT++ G+R Y PE + +
Sbjct: 149 GVLHRDIKDENILIDLNRGELKLIDFGSGALLKD-TVYTDFDGTRVYSPPEWIRYHRYHG 207
Query: 179 SKADMWAMGAIMAEL 193
A +W++G ++ ++
Sbjct: 208 RSAAVWSLGILLYDM 222
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 98/195 (50%), Gaps = 14/195 (7%)
Query: 10 LGRGAFGRVFQAFDEHTGEAVAIKEL-KQRYASWEDCLNLR----EVKCLRKLNH--SNI 62
LG G FG V+ VAIK + K R + W + N EV L+K++ S +
Sbjct: 32 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 91
Query: 63 VKLKELIQNNNRLYLVFECMEC--NLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQN 120
++L + + + L+ E E +L+ + +R E +++ +QV + + + H
Sbjct: 92 IRLLDWFERPDSFVLILERPEPVQDLFDFIT--ERGALQEELARSFFWQVLEAVRHCHNC 149
Query: 121 GFFHRDLKPENLLV--SQGIIKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQSELYS 178
G HRD+K EN+L+ ++G +K+ DFG +K YT++ G+R Y PE + +
Sbjct: 150 GVLHRDIKDENILIDLNRGELKLIDFGSGALLKD-TVYTDFDGTRVYSPPEWIRYHRYHG 208
Query: 179 SKADMWAMGAIMAEL 193
A +W++G ++ ++
Sbjct: 209 RSAAVWSLGILLYDM 223
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 111/223 (49%), Gaps = 30/223 (13%)
Query: 2 DKYSGFKELGRGAFGRVFQA----FDEHTGE---AVAIKELKQRYASWEDCLNL-REVKC 53
DK + K LG GAFG+V A D+ + VA+K LK A+ +D +L E++
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDD-ATEKDLSDLVSEMEM 93
Query: 54 LRKLN-HSNIVKLKELIQNNNRLYLVFE-CMECNLYQLMAAR---------DRKLFSEPE 102
++ + H NI+ L + LY++ + NL + + AR D E +
Sbjct: 94 MKMIGKHKNIINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINRVPEEQ 153
Query: 103 IK-----AWLFQVFQGLSYMHQNGFFHRDLKPENLLVSQG-IIKIADFGLAREIKSGPPY 156
+ + +Q+ +G+ Y+ HRDL N+LV++ ++KIADFGLAR+I + Y
Sbjct: 154 MTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYY 213
Query: 157 TNYVGSRW---YRAPEILLQSELYSSKADMWAMGAIMAELFTF 196
R + APE L +Y+ ++D+W+ G +M E+FT
Sbjct: 214 KKTTNGRLPVKWMAPEALF-DRVYTHQSDVWSFGVLMWEIFTL 255
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 98/195 (50%), Gaps = 14/195 (7%)
Query: 10 LGRGAFGRVFQAFDEHTGEAVAIKEL-KQRYASWEDCLNLR----EVKCLRKLNH--SNI 62
LG G FG V+ VAIK + K R + W + N EV L+K++ S +
Sbjct: 45 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 104
Query: 63 VKLKELIQNNNRLYLVFECMEC--NLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQN 120
++L + + + L+ E E +L+ + +R E +++ +QV + + + H
Sbjct: 105 IRLLDWFERPDSFVLILERPEPVQDLFDFIT--ERGALQEELARSFFWQVLEAVRHCHNC 162
Query: 121 GFFHRDLKPENLLV--SQGIIKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQSELYS 178
G HRD+K EN+L+ ++G +K+ DFG +K YT++ G+R Y PE + +
Sbjct: 163 GVLHRDIKDENILIDLNRGELKLIDFGSGALLKD-TVYTDFDGTRVYSPPEWIRYHRYHG 221
Query: 179 SKADMWAMGAIMAEL 193
A +W++G ++ ++
Sbjct: 222 RSAAVWSLGILLYDM 236
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 98/195 (50%), Gaps = 14/195 (7%)
Query: 10 LGRGAFGRVFQAFDEHTGEAVAIKEL-KQRYASWEDCLNLR----EVKCLRKLNH--SNI 62
LG G FG V+ VAIK + K R + W + N EV L+K++ S +
Sbjct: 59 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 118
Query: 63 VKLKELIQNNNRLYLVFECMEC--NLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQN 120
++L + + + L+ E E +L+ + +R E +++ +QV + + + H
Sbjct: 119 IRLLDWFERPDSFVLILERPEPVQDLFDFIT--ERGALQEELARSFFWQVLEAVRHCHNC 176
Query: 121 GFFHRDLKPENLLV--SQGIIKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQSELYS 178
G HRD+K EN+L+ ++G +K+ DFG +K YT++ G+R Y PE + +
Sbjct: 177 GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-VYTDFDGTRVYSPPEWIRYHRYHG 235
Query: 179 SKADMWAMGAIMAEL 193
A +W++G ++ ++
Sbjct: 236 RSAAVWSLGILLYDM 250
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 98/195 (50%), Gaps = 14/195 (7%)
Query: 10 LGRGAFGRVFQAFDEHTGEAVAIKEL-KQRYASWEDCLNLR----EVKCLRKLNH--SNI 62
LG G FG V+ VAIK + K R + W + N EV L+K++ S +
Sbjct: 44 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 103
Query: 63 VKLKELIQNNNRLYLVFECMEC--NLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQN 120
++L + + + L+ E E +L+ + +R E +++ +QV + + + H
Sbjct: 104 IRLLDWFERPDSFVLILERPEPVQDLFDFIT--ERGALQEELARSFFWQVLEAVRHCHNC 161
Query: 121 GFFHRDLKPENLLV--SQGIIKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQSELYS 178
G HRD+K EN+L+ ++G +K+ DFG +K YT++ G+R Y PE + +
Sbjct: 162 GVLHRDIKDENILIDLNRGELKLIDFGSGALLKD-TVYTDFDGTRVYSPPEWIRYHRYHG 220
Query: 179 SKADMWAMGAIMAEL 193
A +W++G ++ ++
Sbjct: 221 RSAAVWSLGILLYDM 235
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 98/195 (50%), Gaps = 14/195 (7%)
Query: 10 LGRGAFGRVFQAFDEHTGEAVAIKEL-KQRYASWEDCLNLR----EVKCLRKLNH--SNI 62
LG G FG V+ VAIK + K R + W + N EV L+K++ S +
Sbjct: 44 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 103
Query: 63 VKLKELIQNNNRLYLVFECMEC--NLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQN 120
++L + + + L+ E E +L+ + +R E +++ +QV + + + H
Sbjct: 104 IRLLDWFERPDSFVLILERPEPVQDLFDFIT--ERGALQEELARSFFWQVLEAVRHCHNC 161
Query: 121 GFFHRDLKPENLLV--SQGIIKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQSELYS 178
G HRD+K EN+L+ ++G +K+ DFG +K YT++ G+R Y PE + +
Sbjct: 162 GVLHRDIKDENILIDLNRGELKLIDFGSGALLKD-TVYTDFDGTRVYSPPEWIRYHRYHG 220
Query: 179 SKADMWAMGAIMAEL 193
A +W++G ++ ++
Sbjct: 221 RSAAVWSLGILLYDM 235
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 97/198 (48%), Gaps = 11/198 (5%)
Query: 8 KELGRGAFGRVFQAFDEHTGE---AVAIKELKQRYASWEDCLNLREVKCLRKLNHSNIVK 64
K +G G FG V + G+ VAIK LK Y + L E + + +H NI+
Sbjct: 35 KVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIH 94
Query: 65 LKELIQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQNGFFH 124
L+ ++ + ++ E ME ++ F+ ++ L + G+ Y+ H
Sbjct: 95 LEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMKYLSDMSAVH 154
Query: 125 RDLKPENLLVSQGII-KIADFGLAREIKSGP--PYTNYVGS---RWYRAPEILLQSELYS 178
RDL N+LV+ ++ K++DFG++R ++ P YT G RW APE + + ++
Sbjct: 155 RDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRW-TAPEAIAYRK-FT 212
Query: 179 SKADMWAMGAIMAELFTF 196
S +D+W+ G +M E+ ++
Sbjct: 213 SASDVWSYGIVMWEVMSY 230
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 78/303 (25%), Positives = 134/303 (44%), Gaps = 26/303 (8%)
Query: 2 DKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLNLREVKCLRKLNHSN 61
D + ELG G G VF+ + +G +A K + +RE++ L + N
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 65
Query: 62 IVKLKELIQNNNRLYLVFECMEC-NLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQ- 119
IV ++ + + E M+ +L Q++ R E + V +GL+Y+ +
Sbjct: 66 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR--IPEQILGKVSIAVIKGLTYLREK 123
Query: 120 NGFFHRDLKPENLLV-SQGIIKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQSELYS 178
+ HRD+KP N+LV S+G IK+ DFG++ ++ ++VG+R Y +PE LQ YS
Sbjct: 124 HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMA-NSFVGTRSYMSPE-RLQGTHYS 181
Query: 179 SKADMWAMGAIMAEL----FTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQARAI 234
++D+W+MG + E+ + P P A E + M+ C V G D
Sbjct: 182 VQSDIWSMGLSLVEMAVGRYPIPP--PDAKELELMFG-CQVEG--------DAAETPPRP 230
Query: 235 KYQFPQLPRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQ-HPFFKRCFYAPPH 293
+ L + + P A L + + + P K P+ +L+ F +C P
Sbjct: 231 RTPGRPLSSYGMDSRPPMA---IFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPA 287
Query: 294 IRS 296
R+
Sbjct: 288 ERA 290
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 78/303 (25%), Positives = 134/303 (44%), Gaps = 26/303 (8%)
Query: 2 DKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLNLREVKCLRKLNHSN 61
D + ELG G G VF+ + +G +A K + +RE++ L + N
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 65
Query: 62 IVKLKELIQNNNRLYLVFECMEC-NLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQ- 119
IV ++ + + E M+ +L Q++ R E + V +GL+Y+ +
Sbjct: 66 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR--IPEQILGKVSIAVIKGLTYLREK 123
Query: 120 NGFFHRDLKPENLLV-SQGIIKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQSELYS 178
+ HRD+KP N+LV S+G IK+ DFG++ ++ ++VG+R Y +PE LQ YS
Sbjct: 124 HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMA-NSFVGTRSYMSPE-RLQGTHYS 181
Query: 179 SKADMWAMGAIMAEL----FTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQARAI 234
++D+W+MG + E+ + P P A E + M+ C V G D
Sbjct: 182 VQSDIWSMGLSLVEMAVGRYPIPP--PDAKELELMFG-CQVEG--------DAAETPPRP 230
Query: 235 KYQFPQLPRANLSALMPSASQDAISLFESLCSWDPSKRPTAAEALQ-HPFFKRCFYAPPH 293
+ L + + P A L + + + P K P+ +L+ F +C P
Sbjct: 231 RTPGRPLSSYGMDSRPPMA---IFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPA 287
Query: 294 IRS 296
R+
Sbjct: 288 ERA 290
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 98/195 (50%), Gaps = 14/195 (7%)
Query: 10 LGRGAFGRVFQAFDEHTGEAVAIKEL-KQRYASWEDCLNLR----EVKCLRKLNH--SNI 62
LG G FG V+ VAIK + K R + W + N EV L+K++ S +
Sbjct: 44 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 103
Query: 63 VKLKELIQNNNRLYLVFECMEC--NLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQN 120
++L + + + L+ E E +L+ + +R E +++ +QV + + + H
Sbjct: 104 IRLLDWFERPDSFVLILERPEPVQDLFDFIT--ERGALQEELARSFFWQVLEAVRHCHNC 161
Query: 121 GFFHRDLKPENLLV--SQGIIKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQSELYS 178
G HRD+K EN+L+ ++G +K+ DFG +K YT++ G+R Y PE + +
Sbjct: 162 GVLHRDIKDENILIDLNRGELKLIDFGSGALLKD-TVYTDFDGTRVYSPPEWIRYHRYHG 220
Query: 179 SKADMWAMGAIMAEL 193
A +W++G ++ ++
Sbjct: 221 RSAAVWSLGILLYDM 235
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/234 (29%), Positives = 107/234 (45%), Gaps = 31/234 (13%)
Query: 8 KELGRGAFGRVFQA-----FDEHTGEAVAIKELKQRYASWEDCLNLREVKCLRKL-NHSN 61
K LG GAFG+V +A VA+K LK E + E+K L L NH N
Sbjct: 29 KTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMN 88
Query: 62 IVKLKELIQNNNRLYLVFE-CMECNLYQLMAARDRKLF----SEPEI------------- 103
IV L ++ E C +L + R R F + P I
Sbjct: 89 IVNLLGACTIGGPTLVITEYCCYGDLLNFLR-RKRDSFICSKTSPAIMEDDELALDLEDL 147
Query: 104 KAWLFQVFQGLSYMHQNGFFHRDLKPENLLVSQG-IIKIADFGLAREIKSGPPYTNYVGS 162
++ +QV +G++++ HRDL N+L++ G I KI DFGLAR+IK+ Y +
Sbjct: 148 LSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNA 207
Query: 163 RW---YRAPEILLQSELYSSKADMWAMGAIMAELFTF-CPLFPGASEADQMYKI 212
R + APE + +Y+ ++D+W+ G + ELF+ +PG + YK+
Sbjct: 208 RLPVKWMAPESIFNC-VYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKM 260
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 98/195 (50%), Gaps = 14/195 (7%)
Query: 10 LGRGAFGRVFQAFDEHTGEAVAIKEL-KQRYASWEDCLNLR----EVKCLRKLNH--SNI 62
LG G FG V+ VAIK + K R + W + N EV L+K++ S +
Sbjct: 59 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 118
Query: 63 VKLKELIQNNNRLYLVFECMEC--NLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQN 120
++L + + + L+ E E +L+ + +R E +++ +QV + + + H
Sbjct: 119 IRLLDWFERPDSFVLILERPEPVQDLFDFIT--ERGALQEELARSFFWQVLEAVRHCHNC 176
Query: 121 GFFHRDLKPENLLV--SQGIIKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQSELYS 178
G HRD+K EN+L+ ++G +K+ DFG +K YT++ G+R Y PE + +
Sbjct: 177 GVLHRDIKDENILIDLNRGELKLIDFGSGALLKD-TVYTDFDGTRVYSPPEWIRYHRYHG 235
Query: 179 SKADMWAMGAIMAEL 193
A +W++G ++ ++
Sbjct: 236 RSAAVWSLGILLYDM 250
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 99/195 (50%), Gaps = 7/195 (3%)
Query: 2 DKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLNLREVKCLRKLNHSN 61
D + ELG G G VF+ + +G +A K + +RE++ L + N
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 65
Query: 62 IVKLKELIQNNNRLYLVFECMEC-NLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQ- 119
IV ++ + + E M+ +L Q++ R E + V +GL+Y+ +
Sbjct: 66 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR--IPEQILGKVSIAVIKGLTYLREK 123
Query: 120 NGFFHRDLKPENLLV-SQGIIKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQSELYS 178
+ HRD+KP N+LV S+G IK+ DFG++ ++ ++VG+R Y +PE LQ YS
Sbjct: 124 HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMA-NSFVGTRSYMSPE-RLQGTHYS 181
Query: 179 SKADMWAMGAIMAEL 193
++D+W+MG + E+
Sbjct: 182 VQSDIWSMGLSLVEM 196
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/234 (29%), Positives = 107/234 (45%), Gaps = 31/234 (13%)
Query: 8 KELGRGAFGRVFQA-----FDEHTGEAVAIKELKQRYASWEDCLNLREVKCLRKL-NHSN 61
K LG GAFG+V +A VA+K LK E + E+K L L NH N
Sbjct: 45 KTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMN 104
Query: 62 IVKLKELIQNNNRLYLVFE-CMECNLYQLMAARDRKLF----SEPEI------------- 103
IV L ++ E C +L + R R F + P I
Sbjct: 105 IVNLLGACTIGGPTLVITEYCCYGDLLNFLR-RKRDSFICSKTSPAIMEDDELALDLEDL 163
Query: 104 KAWLFQVFQGLSYMHQNGFFHRDLKPENLLVSQG-IIKIADFGLAREIKSGPPYTNYVGS 162
++ +QV +G++++ HRDL N+L++ G I KI DFGLAR+IK+ Y +
Sbjct: 164 LSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNA 223
Query: 163 RW---YRAPEILLQSELYSSKADMWAMGAIMAELFTF-CPLFPGASEADQMYKI 212
R + APE + +Y+ ++D+W+ G + ELF+ +PG + YK+
Sbjct: 224 RLPVKWMAPESIFNC-VYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKM 276
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 98/195 (50%), Gaps = 14/195 (7%)
Query: 10 LGRGAFGRVFQAFDEHTGEAVAIKEL-KQRYASWEDCLNLR----EVKCLRKLNH--SNI 62
LG G FG V+ VAIK + K R + W + N EV L+K++ S +
Sbjct: 17 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 76
Query: 63 VKLKELIQNNNRLYLVFECMEC--NLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQN 120
++L + + + L+ E E +L+ + +R E +++ +QV + + + H
Sbjct: 77 IRLLDWFERPDSFVLILERPEPVQDLFDFIT--ERGALQEELARSFFWQVLEAVRHCHNC 134
Query: 121 GFFHRDLKPENLLV--SQGIIKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQSELYS 178
G HRD+K EN+L+ ++G +K+ DFG +K YT++ G+R Y PE + +
Sbjct: 135 GVLHRDIKDENILIDLNRGELKLIDFGSGALLKD-TVYTDFDGTRVYSPPEWIRYHRYHG 193
Query: 179 SKADMWAMGAIMAEL 193
A +W++G ++ ++
Sbjct: 194 RSAAVWSLGILLYDM 208
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 98/195 (50%), Gaps = 14/195 (7%)
Query: 10 LGRGAFGRVFQAFDEHTGEAVAIKEL-KQRYASWEDCLNLR----EVKCLRKLNH--SNI 62
LG G FG V+ VAIK + K R + W + N EV L+K++ S +
Sbjct: 17 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 76
Query: 63 VKLKELIQNNNRLYLVFECMEC--NLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQN 120
++L + + + L+ E E +L+ + +R E +++ +QV + + + H
Sbjct: 77 IRLLDWFERPDSFVLILERPEPVQDLFDFIT--ERGALQEELARSFFWQVLEAVRHCHNC 134
Query: 121 GFFHRDLKPENLLV--SQGIIKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQSELYS 178
G HRD+K EN+L+ ++G +K+ DFG +K YT++ G+R Y PE + +
Sbjct: 135 GVLHRDIKDENILIDLNRGELKLIDFGSGALLKD-TVYTDFDGTRVYSPPEWIRYHRYHG 193
Query: 179 SKADMWAMGAIMAEL 193
A +W++G ++ ++
Sbjct: 194 RSAAVWSLGILLYDM 208
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/237 (29%), Positives = 116/237 (48%), Gaps = 38/237 (16%)
Query: 8 KELGRGAFGRVFQAFDEHTG---------EAVAIKELKQRYASWEDCLNL-REVKCLRKL 57
K LG GAFG+V A E G VA+K LK A+ +D +L E++ ++ +
Sbjct: 34 KPLGEGAFGQVVLA--EAIGLDKDKPNRVTKVAVKMLKSD-ATEKDLSDLISEMEMMKMI 90
Query: 58 N-HSNIVKLKELIQNNNRLYLVFE-CMECNLYQLMAAR--------------DRKLFSEP 101
H NI+ L + LY++ E + NL + + AR + S
Sbjct: 91 GKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQLSSK 150
Query: 102 EIKAWLFQVFQGLSYMHQNGFFHRDLKPENLLVSQ-GIIKIADFGLAREIKSGPPYTNYV 160
++ + +QV +G+ Y+ HRDL N+LV++ ++KIADFGLAR+I
Sbjct: 151 DLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDXXKKTT 210
Query: 161 GSRW---YRAPEILLQSELYSSKADMWAMGAIMAELFTF--CPLFPGASEADQMYKI 212
R + APE L +Y+ ++D+W+ G ++ E+FT P +PG ++++K+
Sbjct: 211 NGRLPVKWMAPEALF-DRIYTHQSDVWSFGVLLWEIFTLGGSP-YPGVP-VEELFKL 264
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 98/195 (50%), Gaps = 14/195 (7%)
Query: 10 LGRGAFGRVFQAFDEHTGEAVAIKEL-KQRYASWEDCLNLR----EVKCLRKLNH--SNI 62
LG G FG V+ VAIK + K R + W + N EV L+K++ S +
Sbjct: 16 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 75
Query: 63 VKLKELIQNNNRLYLVFECMEC--NLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQN 120
++L + + + L+ E E +L+ + +R E +++ +QV + + + H
Sbjct: 76 IRLLDWFERPDSFVLILERPEPVQDLFDFIT--ERGALQEELARSFFWQVLEAVRHCHNC 133
Query: 121 GFFHRDLKPENLLV--SQGIIKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQSELYS 178
G HRD+K EN+L+ ++G +K+ DFG +K YT++ G+R Y PE + +
Sbjct: 134 GVLHRDIKDENILIDLNRGELKLIDFGSGALLKD-TVYTDFDGTRVYSPPEWIRYHRYHG 192
Query: 179 SKADMWAMGAIMAEL 193
A +W++G ++ ++
Sbjct: 193 RSAAVWSLGILLYDM 207
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 98/195 (50%), Gaps = 14/195 (7%)
Query: 10 LGRGAFGRVFQAFDEHTGEAVAIKEL-KQRYASWEDCLNLR----EVKCLRKLNH--SNI 62
LG G FG V+ VAIK + K R + W + N EV L+K++ S +
Sbjct: 12 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 71
Query: 63 VKLKELIQNNNRLYLVFECMEC--NLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQN 120
++L + + + L+ E E +L+ + +R E +++ +QV + + + H
Sbjct: 72 IRLLDWFERPDSFVLILERPEPVQDLFDFIT--ERGALQEELARSFFWQVLEAVRHCHNX 129
Query: 121 GFFHRDLKPENLLV--SQGIIKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQSELYS 178
G HRD+K EN+L+ ++G +K+ DFG +K YT++ G+R Y PE + +
Sbjct: 130 GVLHRDIKDENILIDLNRGELKLIDFGSGALLKD-TVYTDFDGTRVYSPPEWIRYHRYHG 188
Query: 179 SKADMWAMGAIMAEL 193
A +W++G ++ ++
Sbjct: 189 RSAAVWSLGILLYDM 203
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 109/204 (53%), Gaps = 14/204 (6%)
Query: 8 KELGRGAFGRVFQAF-DEHTGEAVAIKELKQRYASWEDCLNLREVKCLRKLNHSNIVKLK 66
+ LG G FG V+ + + HT VA+K LKQ S D L E +++L H +V+L
Sbjct: 15 ERLGAGQFGEVWMGYYNGHT--KVAVKSLKQGSMS-PDAF-LAEANLMKQLQHQRLVRLY 70
Query: 67 ELIQNNNRLYLVFECME-CNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQNGFFHR 125
++ +Y++ E ME +L + + ++ Q+ +G++++ + + HR
Sbjct: 71 AVV-TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHR 129
Query: 126 DLKPENLLVSQGI-IKIADFGLAREIKSGPPYTNYVGSRW---YRAPEILLQSELYSSKA 181
+L+ N+LVS + KIADFGLAR I+ YT G+++ + APE + ++ K+
Sbjct: 130 NLRAANILVSDTLSCKIADFGLARLIEDN-EYTAREGAKFPIKWTAPEA-INYGTFTIKS 187
Query: 182 DMWAMGAIMAELFTFCPL-FPGAS 204
D+W+ G ++ E+ T + +PG +
Sbjct: 188 DVWSFGILLTEIVTHGRIPYPGMT 211
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 98/195 (50%), Gaps = 14/195 (7%)
Query: 10 LGRGAFGRVFQAFDEHTGEAVAIKEL-KQRYASWEDCLNLR----EVKCLRKLNH--SNI 62
LG G FG V+ VAIK + K R + W + N EV L+K++ S +
Sbjct: 39 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 98
Query: 63 VKLKELIQNNNRLYLVFECMEC--NLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQN 120
++L + + + L+ E E +L+ + +R E +++ +QV + + + H
Sbjct: 99 IRLLDWFERPDSFVLILERPEPVQDLFDFIT--ERGALQEELARSFFWQVLEAVRHCHNC 156
Query: 121 GFFHRDLKPENLLV--SQGIIKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQSELYS 178
G HRD+K EN+L+ ++G +K+ DFG +K YT++ G+R Y PE + +
Sbjct: 157 GVLHRDIKDENILIDLNRGELKLIDFGSGALLKD-TVYTDFDGTRVYSPPEWIRYHRYHG 215
Query: 179 SKADMWAMGAIMAEL 193
A +W++G ++ ++
Sbjct: 216 RSAAVWSLGILLYDM 230
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/196 (30%), Positives = 104/196 (53%), Gaps = 13/196 (6%)
Query: 7 FKELGRGAFGRVFQAFDEHTGEA-VAIKELKQRYASWEDCLNLREVKCLRKLNHSNIVKL 65
KELG G FG V + G+ VA+K +K+ S ++ +E + + KL+H +VK
Sbjct: 13 LKELGSGQFGVV--KLGKWKGQYDVAVKMIKEGSMSEDEFF--QEAQTMMKLSHPKLVKF 68
Query: 66 KELIQNNNRLYLVFECMECNLYQLMAARDRKLFSEP-EIKAWLFQVFQGLSYMHQNGFFH 124
+ +Y+V E + N L R EP ++ + V +G++++ + F H
Sbjct: 69 YGVCSKEYPIYIVTEYIS-NGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFLESHQFIH 127
Query: 125 RDLKPENLLVSQGI-IKIADFGLAREIKSGPPYTNYVGSRW---YRAPEILLQSELYSSK 180
RDL N LV + + +K++DFG+ R + Y + VG+++ + APE+ + YSSK
Sbjct: 128 RDLAARNCLVDRDLCVKVSDFGMTRYVLDDQ-YVSSVGTKFPVKWSAPEVFHYFK-YSSK 185
Query: 181 ADMWAMGAIMAELFTF 196
+D+WA G +M E+F+
Sbjct: 186 SDVWAFGILMWEVFSL 201
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 98/195 (50%), Gaps = 14/195 (7%)
Query: 10 LGRGAFGRVFQAFDEHTGEAVAIKEL-KQRYASWEDCLNLR----EVKCLRKLNH--SNI 62
LG G FG V+ VAIK + K R + W + N EV L+K++ S +
Sbjct: 17 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 76
Query: 63 VKLKELIQNNNRLYLVFECMEC--NLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQN 120
++L + + + L+ E E +L+ + +R E +++ +QV + + + H
Sbjct: 77 IRLLDWFERPDSFVLILERPEPVQDLFDFIT--ERGALQEELARSFFWQVLEAVRHCHNC 134
Query: 121 GFFHRDLKPENLLV--SQGIIKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQSELYS 178
G HRD+K EN+L+ ++G +K+ DFG +K YT++ G+R Y PE + +
Sbjct: 135 GVLHRDIKDENILIDLNRGELKLIDFGSGALLKD-TVYTDFDGTRVYSPPEWIRYHRYHG 193
Query: 179 SKADMWAMGAIMAEL 193
A +W++G ++ ++
Sbjct: 194 RSAAVWSLGILLYDM 208
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/234 (29%), Positives = 107/234 (45%), Gaps = 31/234 (13%)
Query: 8 KELGRGAFGRVFQA-----FDEHTGEAVAIKELKQRYASWEDCLNLREVKCLRKL-NHSN 61
K LG GAFG+V +A VA+K LK E + E+K L L NH N
Sbjct: 52 KTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMN 111
Query: 62 IVKLKELIQNNNRLYLVFE-CMECNLYQLMAARDRKLF----SEPEI------------- 103
IV L ++ E C +L + R R F + P I
Sbjct: 112 IVNLLGACTIGGPTLVITEYCCYGDLLNFLR-RKRDSFICSKTSPAIMEDDELALDLEDL 170
Query: 104 KAWLFQVFQGLSYMHQNGFFHRDLKPENLLVSQG-IIKIADFGLAREIKSGPPYTNYVGS 162
++ +QV +G++++ HRDL N+L++ G I KI DFGLAR+IK+ Y +
Sbjct: 171 LSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNA 230
Query: 163 RW---YRAPEILLQSELYSSKADMWAMGAIMAELFTF-CPLFPGASEADQMYKI 212
R + APE + +Y+ ++D+W+ G + ELF+ +PG + YK+
Sbjct: 231 RLPVKWMAPESIFNC-VYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKM 283
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/234 (29%), Positives = 107/234 (45%), Gaps = 31/234 (13%)
Query: 8 KELGRGAFGRVFQA-----FDEHTGEAVAIKELKQRYASWEDCLNLREVKCLRKL-NHSN 61
K LG GAFG+V +A VA+K LK E + E+K L L NH N
Sbjct: 47 KTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMN 106
Query: 62 IVKLKELIQNNNRLYLVFE-CMECNLYQLMAARDRKLF----SEPEI------------- 103
IV L ++ E C +L + R R F + P I
Sbjct: 107 IVNLLGACTIGGPTLVITEYCCYGDLLNFLR-RKRDSFICSKTSPAIMEDDELALDLEDL 165
Query: 104 KAWLFQVFQGLSYMHQNGFFHRDLKPENLLVSQG-IIKIADFGLAREIKSGPPYTNYVGS 162
++ +QV +G++++ HRDL N+L++ G I KI DFGLAR+IK+ Y +
Sbjct: 166 LSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNA 225
Query: 163 RW---YRAPEILLQSELYSSKADMWAMGAIMAELFTF-CPLFPGASEADQMYKI 212
R + APE + +Y+ ++D+W+ G + ELF+ +PG + YK+
Sbjct: 226 RLPVKWMAPESIFNC-VYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKM 278
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 105/222 (47%), Gaps = 15/222 (6%)
Query: 2 DKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLNLR---EVKCLRKLN 58
D+Y + LG G V A D VA+K L+ A + LR E + LN
Sbjct: 12 DRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLA-RDPSFYLRFRREAQNAAALN 70
Query: 59 HSNIVKLKELIQNNNRL----YLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGL 114
H IV + + + Y+V E ++ + + + + + I+ + Q L
Sbjct: 71 HPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEV-IADACQAL 129
Query: 115 SYMHQNGFFHRDLKPENLLVS-QGIIKIADFGLAREI-KSGPPYTN---YVGSRWYRAPE 169
++ HQNG HRD+KP N+++S +K+ DFG+AR I SG T +G+ Y +PE
Sbjct: 130 NFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPE 189
Query: 170 ILLQSELYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYK 211
+ + +++D++++G ++ E+ T P F G S Y+
Sbjct: 190 -QARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQ 230
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 84/298 (28%), Positives = 128/298 (42%), Gaps = 65/298 (21%)
Query: 10 LGRGAFGRVFQ--AFDEHTGEAVAIKELKQRYASWEDCLNLREVKCLRKLN-HSNIVKLK 66
LG GA G + FD VA+K + S+ D REV+ LR+ + H N+++
Sbjct: 32 LGHGAEGTIVYRGMFD---NRDVAVKRILPECFSFAD----REVQLLRESDEHPNVIRYF 84
Query: 67 ELIQNNNRLYLVFECMECNLYQLMAARD-RKLFSEPEIKAWLFQVFQGLSYMHQNGFFHR 125
++ Y+ E L + + +D L EP L Q GL+++H HR
Sbjct: 85 CTEKDRQFQYIAIELCAATLQEYVEQKDFAHLGLEP--ITLLQQTTSGLAHLHSLNIVHR 142
Query: 126 DLKPENLLVS----QGIIK--IADFGLAREI---------KSGPPYTNYVGSRWYRAPEI 170
DLKP N+L+S G IK I+DFGL +++ +SG P G+ + APE+
Sbjct: 143 DLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVP-----GTEGWIAPEM 197
Query: 171 LLQS--ELYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGL 228
L + E + D+++ G + Y + P S
Sbjct: 198 LSEDCKENPTYTVDIFSAGCV-------------------FYYVISEGSHPFGKSLQ--- 235
Query: 229 RQARAIKYQFPQLPRANLSALMPSASQDAIS--LFESLCSWDPSKRPTAAEALQHPFF 284
RQA + L +L L P +D I+ L E + + DP KRP+A L+HPFF
Sbjct: 236 RQANIL------LGACSLDCLHPEKHEDVIARELIEKMIAMDPQKRPSAKHVLKHPFF 287
>pdb|1HOW|A Chain A, The X-Ray Crystal Structure Of Sky1p, An Sr Protein Kinase
In Yeast
pdb|2JD5|A Chain A, Sky1p Bound To Npl3p-Derived Substrate Peptide
pdb|2JD5|B Chain B, Sky1p Bound To Npl3p-Derived Substrate Peptide
Length = 373
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 87/322 (27%), Positives = 143/322 (44%), Gaps = 42/322 (13%)
Query: 3 KYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLNLREVKCLRKLNHSNI 62
+Y ++LG G F V+ A D VA+K ++ E + E+K L+++N ++
Sbjct: 20 RYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAED--EIKLLQRVNDADN 77
Query: 63 VK---------LKELIQNNNR------LYLVFECMECNLYQLMAARDRKLFSEPEIKAWL 107
K LK L N++ + +VFE + NL L+ + + +K
Sbjct: 78 TKEDSMGANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQIS 137
Query: 108 FQVFQGLSYMHQN-GFFHRDLKPENLLVS-----QGIIKIADFGLAREIKSGPPYTNYVG 161
Q+ GL YMH+ G H D+KPEN+L+ + +I+I L YTN +
Sbjct: 138 KQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDEHYTNSIQ 197
Query: 162 SRWYRAPEILLQSELYSSKADMWAMGAIMAELFTFCPLF---PGAS---EADQMYKICGV 215
+R YR+PE+LL + + AD+W+ ++ EL T LF G S + D + +I +
Sbjct: 198 TREYRSPEVLLGAP-WGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIEL 256
Query: 216 LGS-PTM----DSWADGLRQARAIKYQFPQL---PRANLSALMPSASQD---AISLFES- 263
LG P+ + +R + +L P ++ S+D IS F S
Sbjct: 257 LGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSP 316
Query: 264 LCSWDPSKRPTAAEALQHPFFK 285
+ DP KR A + HP+ K
Sbjct: 317 MLQLDPRKRADAGGLVNHPWLK 338
>pdb|1Q8Y|A Chain A, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Y|B Chain B, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Z|A Chain A, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q8Z|B Chain B, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q97|A Chain A, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q97|B Chain B, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q99|A Chain A, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
pdb|1Q99|B Chain B, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
Length = 373
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 87/322 (27%), Positives = 143/322 (44%), Gaps = 42/322 (13%)
Query: 3 KYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLNLREVKCLRKLNHSNI 62
+Y ++LG G F V+ A D VA+K ++ E + E+K L+++N ++
Sbjct: 20 RYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAED--EIKLLQRVNDADN 77
Query: 63 VK---------LKELIQNNNR------LYLVFECMECNLYQLMAARDRKLFSEPEIKAWL 107
K LK L N++ + +VFE + NL L+ + + +K
Sbjct: 78 TKEDSMGANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQIS 137
Query: 108 FQVFQGLSYMHQN-GFFHRDLKPENLLVS-----QGIIKIADFGLAREIKSGPPYTNYVG 161
Q+ GL YMH+ G H D+KPEN+L+ + +I+I L YTN +
Sbjct: 138 KQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDEHYTNSIQ 197
Query: 162 SRWYRAPEILLQSELYSSKADMWAMGAIMAELFTFCPLF---PGAS---EADQMYKICGV 215
+R YR+PE+LL + + AD+W+ ++ EL T LF G S + D + +I +
Sbjct: 198 TREYRSPEVLLGAP-WGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIEL 256
Query: 216 LGS-PTM----DSWADGLRQARAIKYQFPQL---PRANLSALMPSASQD---AISLFES- 263
LG P+ + +R + +L P ++ S+D IS F S
Sbjct: 257 LGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSP 316
Query: 264 LCSWDPSKRPTAAEALQHPFFK 285
+ DP KR A + HP+ K
Sbjct: 317 MLQLDPRKRADAGGLVNHPWLK 338
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 98/195 (50%), Gaps = 14/195 (7%)
Query: 10 LGRGAFGRVFQAFDEHTGEAVAIKEL-KQRYASWEDCLNLR----EVKCLRKLNH--SNI 62
LG G FG V+ VAIK + K R + W + N EV L+K++ S +
Sbjct: 12 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 71
Query: 63 VKLKELIQNNNRLYLVFECMEC--NLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQN 120
++L + + + L+ E E +L+ + +R E +++ +QV + + + H
Sbjct: 72 IRLLDWFERPDSFVLILERPEPVQDLFDFIT--ERGALQEELARSFFWQVLEAVRHCHNC 129
Query: 121 GFFHRDLKPENLLV--SQGIIKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQSELYS 178
G HRD+K EN+L+ ++G +K+ DFG +K YT++ G+R Y PE + +
Sbjct: 130 GVLHRDIKDENILIDLNRGELKLIDFGSGALLKD-TVYTDFDGTRVYSPPEWIRYHRYHG 188
Query: 179 SKADMWAMGAIMAEL 193
A +W++G ++ ++
Sbjct: 189 RSAAVWSLGILLYDM 203
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 112/229 (48%), Gaps = 23/229 (10%)
Query: 2 DKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLNLREVKCLRK----- 56
D + K +GRGAF V + TG+ A+K + + W D L EV C R+
Sbjct: 61 DDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNK----W-DMLKRGEVSCFREERDVL 115
Query: 57 LNHSN--IVKLKELIQNNNRLYLVFEC-MECNLYQLMAARDRKLFSEPEIKAWLFQVFQG 113
+N I +L Q+ N LYLV E + +L L++ ++ +E + +L ++
Sbjct: 116 VNGDRRWITQLHFAFQDENYLYLVMEYYVGGDLLTLLSKFGERIPAE-MARFYLAEIVMA 174
Query: 114 LSYMHQNGFFHRDLKPENLLVSQ-GIIKIADFGLAREIKSGPPYTNY--VGSRWYRAPEI 170
+ +H+ G+ HRD+KP+N+L+ + G I++ADFG ++++ + VG+ Y +PEI
Sbjct: 175 IDSVHRLGYVHRDIKPDNILLDRCGHIRLADFGSCLKLRADGTVRSLVAVGTPDYLSPEI 234
Query: 171 L------LQSELYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKIC 213
L + Y + D WA+G E+F F S A+ KI
Sbjct: 235 LQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAETYGKIV 283
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 105/222 (47%), Gaps = 15/222 (6%)
Query: 2 DKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLNLR---EVKCLRKLN 58
D+Y + LG G V A D VA+K L+ A + LR E + LN
Sbjct: 12 DRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLA-RDPSFYLRFRREAQNAAALN 70
Query: 59 HSNIVKLKELIQNNNRL----YLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGL 114
H IV + + + Y+V E ++ + + + + + I+ + Q L
Sbjct: 71 HPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEV-IADACQAL 129
Query: 115 SYMHQNGFFHRDLKPENLLVS-QGIIKIADFGLAREI-KSGPPYTN---YVGSRWYRAPE 169
++ HQNG HRD+KP N+++S +K+ DFG+AR I SG T +G+ Y +PE
Sbjct: 130 NFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPE 189
Query: 170 ILLQSELYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYK 211
+ + +++D++++G ++ E+ T P F G S Y+
Sbjct: 190 -QARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQ 230
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 98/195 (50%), Gaps = 14/195 (7%)
Query: 10 LGRGAFGRVFQAFDEHTGEAVAIKEL-KQRYASWEDCLNLR----EVKCLRKLNH--SNI 62
LG G FG V+ VAIK + K R + W + N EV L+K++ S +
Sbjct: 12 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 71
Query: 63 VKLKELIQNNNRLYLVFECMEC--NLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQN 120
++L + + + L+ E E +L+ + +R E +++ +QV + + + H
Sbjct: 72 IRLLDWFERPDSFVLILERPEPVQDLFDFIT--ERGALQEELARSFFWQVLEAVRHCHNC 129
Query: 121 GFFHRDLKPENLLV--SQGIIKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQSELYS 178
G HRD+K EN+L+ ++G +K+ DFG +K YT++ G+R Y PE + +
Sbjct: 130 GVLHRDIKDENILIDLNRGELKLIDFGSGALLKD-TVYTDFDGTRVYSPPEWIRYHRYHG 188
Query: 179 SKADMWAMGAIMAEL 193
A +W++G ++ ++
Sbjct: 189 RSAAVWSLGILLYDM 203
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 98/195 (50%), Gaps = 14/195 (7%)
Query: 10 LGRGAFGRVFQAFDEHTGEAVAIKEL-KQRYASWEDCLNLR----EVKCLRKLNH--SNI 62
LG G FG V+ VAIK + K R + W + N EV L+K++ S +
Sbjct: 15 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 74
Query: 63 VKLKELIQNNNRLYLVFECMEC--NLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQN 120
++L + + + L+ E E +L+ + +R E +++ +QV + + + H
Sbjct: 75 IRLLDWFERPDSFVLILERPEPVQDLFDFIT--ERGALQEELARSFFWQVLEAVRHCHNC 132
Query: 121 GFFHRDLKPENLLV--SQGIIKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQSELYS 178
G HRD+K EN+L+ ++G +K+ DFG +K YT++ G+R Y PE + +
Sbjct: 133 GVLHRDIKDENILIDLNRGELKLIDFGSGALLKD-TVYTDFDGTRVYSPPEWIRYHRYHG 191
Query: 179 SKADMWAMGAIMAEL 193
A +W++G ++ ++
Sbjct: 192 RSAAVWSLGILLYDM 206
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 101/208 (48%), Gaps = 7/208 (3%)
Query: 2 DKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLNL--REVKCLRKLNH 59
++Y +LG G V+ A D VAIK + E+ L REV +L+H
Sbjct: 11 ERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSH 70
Query: 60 SNIVKLKELIQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQ 119
NIV + ++ + ++ YLV E +E L + I + Q+ G+ + H
Sbjct: 71 QNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYIESHGPLSVDTAIN-FTNQILDGIKHAHD 129
Query: 120 NGFFHRDLKPENLLV-SQGIIKIADFGLAREI-KSGPPYTNYV-GSRWYRAPEILLQSEL 176
HRD+KP+N+L+ S +KI DFG+A+ + ++ TN+V G+ Y +PE + E
Sbjct: 130 MRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQTNHVLGTVQYFSPE-QAKGEA 188
Query: 177 YSSKADMWAMGAIMAELFTFCPLFPGAS 204
D++++G ++ E+ P F G +
Sbjct: 189 TDECTDIYSIGIVLYEMLVGEPPFNGET 216
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 108/204 (52%), Gaps = 14/204 (6%)
Query: 8 KELGRGAFGRVFQAF-DEHTGEAVAIKELKQRYASWEDCLNLREVKCLRKLNHSNIVKLK 66
+ LG G FG V+ + + HT VA+K LKQ S D L E +++L H +V+L
Sbjct: 27 ERLGAGQFGEVWMGYYNGHT--KVAVKSLKQGSMS-PDAF-LAEANLMKQLQHQRLVRLY 82
Query: 67 ELIQNNNRLYLVFECME-CNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQNGFFHR 125
++ +Y++ E ME +L + + ++ Q+ +G++++ + + HR
Sbjct: 83 AVV-TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHR 141
Query: 126 DLKPENLLVSQGI-IKIADFGLAREIKSGPPYTNYVGSRW---YRAPEILLQSELYSSKA 181
DL+ N+LVS + KIADFGLAR I+ T G+++ + APE + ++ K+
Sbjct: 142 DLRAANILVSDTLSCKIADFGLARLIEDN-EXTAREGAKFPIKWTAPEA-INYGTFTIKS 199
Query: 182 DMWAMGAIMAELFTFCPL-FPGAS 204
D+W+ G ++ E+ T + +PG +
Sbjct: 200 DVWSFGILLTEIVTHGRIPYPGMT 223
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 91/194 (46%), Gaps = 7/194 (3%)
Query: 8 KELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLNLREVKCLRKLNHSNIVKLKE 67
+++GRG FG VF VA+K ++ L+E + L++ +H NIV+L
Sbjct: 120 EQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIG 179
Query: 68 LIQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQNGFFHRDL 127
+ +Y+V E ++ + + + + G+ Y+ HRDL
Sbjct: 180 VCTQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKCCIHRDL 239
Query: 128 KPENLLVSQ-GIIKIADFGLAREIKSGPPYTNYVGSRW----YRAPEILLQSELYSSKAD 182
N LV++ ++KI+DFG++RE G Y G R + APE L YSS++D
Sbjct: 240 AARNCLVTEKNVLKISDFGMSREEADG-VYAASGGLRQVPVKWTAPEALNYGR-YSSESD 297
Query: 183 MWAMGAIMAELFTF 196
+W+ G ++ E F+
Sbjct: 298 VWSFGILLWETFSL 311
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 70/234 (29%), Positives = 106/234 (45%), Gaps = 31/234 (13%)
Query: 8 KELGRGAFGRVFQA-----FDEHTGEAVAIKELKQRYASWEDCLNLREVKCLRKL-NHSN 61
K LG GAFG+V +A VA+K LK E + E+K L L NH N
Sbjct: 52 KTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMN 111
Query: 62 IVKLKELIQNNNRLYLVFE-CMECNLYQLMAARDRKLF----SEPEI------------- 103
IV L ++ E C +L + R R F + P I
Sbjct: 112 IVNLLGACTIGGPTLVITEYCCYGDLLNFLR-RKRDSFICSKTSPAIMEDDELALDLEDL 170
Query: 104 KAWLFQVFQGLSYMHQNGFFHRDLKPENLLVSQG-IIKIADFGLAREIKSGPPYTNYVGS 162
++ +QV +G++++ HRDL N+L++ G I KI DFGLAR IK+ Y +
Sbjct: 171 LSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARHIKNDSNYVVKGNA 230
Query: 163 RW---YRAPEILLQSELYSSKADMWAMGAIMAELFTF-CPLFPGASEADQMYKI 212
R + APE + +Y+ ++D+W+ G + ELF+ +PG + YK+
Sbjct: 231 RLPVKWMAPESIFNC-VYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKM 283
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 105/222 (47%), Gaps = 15/222 (6%)
Query: 2 DKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLNLR---EVKCLRKLN 58
D+Y + LG G V A D VA+K L+ A + LR E + LN
Sbjct: 12 DRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLA-RDPSFYLRFRREAQNAAALN 70
Query: 59 HSNIVKLKELIQNNNRL----YLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGL 114
H IV + + + Y+V E ++ + + + + + I+ + Q L
Sbjct: 71 HPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEV-IADACQAL 129
Query: 115 SYMHQNGFFHRDLKPENLLVS-QGIIKIADFGLAREI-KSGPPYTN---YVGSRWYRAPE 169
++ HQNG HRD+KP N+++S +K+ DFG+AR I SG T +G+ Y +PE
Sbjct: 130 NFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPE 189
Query: 170 ILLQSELYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYK 211
+ + +++D++++G ++ E+ T P F G S Y+
Sbjct: 190 -QARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPDSVAYQ 230
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 83/173 (47%), Gaps = 8/173 (4%)
Query: 30 VAIKELKQRYASWEDCLNLREVKCLRKLNHSNIVKLKELIQNNNRLYLVFECMECNLYQL 89
VAIK LK Y + L E + + +H NI++L+ ++ +V E ME
Sbjct: 80 VAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDT 139
Query: 90 MAARDRKLFSEPEIKAWLFQVFQGLSYMHQNGFFHRDLKPENLLVSQGII-KIADFGLAR 148
F+ ++ L V G+ Y+ G+ HRDL N+LV ++ K++DFGL+R
Sbjct: 140 FLRTHDGQFTIMQLVGMLRGVGAGMRYLSDLGYVHRDLAARNVLVDSNLVCKVSDFGLSR 199
Query: 149 EIKSGP--PYTNYVGS---RWYRAPEILLQSELYSSKADMWAMGAIMAELFTF 196
++ P T G RW APE + +SS +D+W+ G +M E+ +
Sbjct: 200 VLEDDPDAAXTTTGGKIPIRWT-APEA-IAFRTFSSASDVWSFGVVMWEVLAY 250
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 103/222 (46%), Gaps = 15/222 (6%)
Query: 2 DKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLNLR---EVKCLRKLN 58
D+Y + LG G V A D VA+K L+ A + LR E + LN
Sbjct: 12 DRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLA-RDPSFYLRFRREAQNAAALN 70
Query: 59 HSNIVKLKELIQNNNRL----YLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGL 114
H IV + + + Y+V E ++ + + + + + I+ + Q L
Sbjct: 71 HPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEV-IADACQAL 129
Query: 115 SYMHQNGFFHRDLKPENLLVS-QGIIKIADFGLAREI----KSGPPYTNYVGSRWYRAPE 169
++ HQNG HRD+KP N+L+S +K+ DFG+AR I S +G+ Y +PE
Sbjct: 130 NFSHQNGIIHRDVKPANILISATNAVKVVDFGIARAIADSGNSVXQTAAVIGTAQYLSPE 189
Query: 170 ILLQSELYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYK 211
+ + +++D++++G ++ E+ T P F G S Y+
Sbjct: 190 -QARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQ 230
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 104/208 (50%), Gaps = 25/208 (12%)
Query: 6 GFKELGRGAFGRVFQAFDEHTGEAV---------AIKELKQRYASWEDCLNLREVKCLRK 56
G ++G G FG V++ + +T AV +ELKQ++ +E+K + K
Sbjct: 35 GGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELKQQFD--------QEIKVMAK 86
Query: 57 LNHSNIVKLKELIQNNNRLYLVFECM-ECNLYQLMAARDRKLFSEPEIKAWLFQ-VFQGL 114
H N+V+L + + L LV+ M +L ++ D ++ + Q G+
Sbjct: 87 CQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGI 146
Query: 115 SYMHQNGFFHRDLKPENLLVSQGII-KIADFGLAR---EIKSGPPYTNYVGSRWYRAPEI 170
+++H+N HRD+K N+L+ + KI+DFGLAR + + VG+ Y APE
Sbjct: 147 NFLHENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXSRIVGTTAYMAPEA 206
Query: 171 LLQSELYSSKADMWAMGAIMAELFTFCP 198
L+ E+ + K+D+++ G ++ E+ T P
Sbjct: 207 -LRGEI-TPKSDIYSFGVVLLEIITGLP 232
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 91/194 (46%), Gaps = 7/194 (3%)
Query: 8 KELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLNLREVKCLRKLNHSNIVKLKE 67
+++GRG FG VF VA+K ++ L+E + L++ +H NIV+L
Sbjct: 120 EQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIG 179
Query: 68 LIQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQNGFFHRDL 127
+ +Y+V E ++ + + + + G+ Y+ HRDL
Sbjct: 180 VCTQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKCCIHRDL 239
Query: 128 KPENLLVSQ-GIIKIADFGLAREIKSGPPYTN----YVGSRWYRAPEILLQSELYSSKAD 182
N LV++ ++KI+DFG++RE G + V +W APE L YSS++D
Sbjct: 240 AARNCLVTEKNVLKISDFGMSREEADGVXAASGGLRQVPVKW-TAPEALNYGR-YSSESD 297
Query: 183 MWAMGAIMAELFTF 196
+W+ G ++ E F+
Sbjct: 298 VWSFGILLWETFSL 311
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 105/222 (47%), Gaps = 15/222 (6%)
Query: 2 DKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLNLR---EVKCLRKLN 58
D+Y + LG G V A D VA+K L+ A + LR E + LN
Sbjct: 29 DRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLA-RDPSFYLRFRREAQNAAALN 87
Query: 59 HSNIVKLKELIQNNNRL----YLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGL 114
H IV + + + Y+V E ++ + + + + + I+ + Q L
Sbjct: 88 HPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEV-IADACQAL 146
Query: 115 SYMHQNGFFHRDLKPENLLVS-QGIIKIADFGLAREI-KSGPPYTN---YVGSRWYRAPE 169
++ HQNG HRD+KP N+++S +K+ DFG+AR I SG T +G+ Y +PE
Sbjct: 147 NFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPE 206
Query: 170 ILLQSELYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYK 211
+ + +++D++++G ++ E+ T P F G S Y+
Sbjct: 207 -QARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQ 247
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 108/204 (52%), Gaps = 14/204 (6%)
Query: 8 KELGRGAFGRVFQAF-DEHTGEAVAIKELKQRYASWEDCLNLREVKCLRKLNHSNIVKLK 66
+ LG G FG V+ + + HT VA+K LKQ S D L E +++L H +V+L
Sbjct: 25 ERLGAGQFGEVWMGYYNGHT--KVAVKSLKQGSMS-PDAF-LAEANLMKQLQHQRLVRLY 80
Query: 67 ELIQNNNRLYLVFECME-CNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQNGFFHR 125
++ +Y++ E ME +L + + ++ Q+ +G++++ + + HR
Sbjct: 81 AVV-TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHR 139
Query: 126 DLKPENLLVSQGI-IKIADFGLAREIKSGPPYTNYVGSRW---YRAPEILLQSELYSSKA 181
DL+ N+LVS + KIADFGLAR I+ T G+++ + APE + ++ K+
Sbjct: 140 DLRAANILVSDTLSCKIADFGLARLIEDN-EXTAREGAKFPIKWTAPEA-INYGTFTIKS 197
Query: 182 DMWAMGAIMAELFTFCPL-FPGAS 204
D+W+ G ++ E+ T + +PG +
Sbjct: 198 DVWSFGILLTEIVTHGRIPYPGMT 221
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 104/217 (47%), Gaps = 34/217 (15%)
Query: 8 KELGRGAFGRVFQAFDEHTGEA-----VAIKELKQ-RYASWEDCLNLREVKCLRKLNHSN 61
+ELG GAFG+VF A + VA+K LK A+ +D RE + L L H +
Sbjct: 21 RELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQ--REAELLTNLQHEH 78
Query: 62 IVKLKELIQNNNRLYLVFECMEC------------NLYQLMAARDRKLFSEPEIKAWLF- 108
IVK + + + L +VFE M+ + L+ + R+ E + L
Sbjct: 79 IVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHI 138
Query: 109 --QVFQGLSYMHQNGFFHRDLKPENLLVSQG-IIKIADFGLAREIKSGPPYTNYVGS--- 162
Q+ G+ Y+ F HRDL N LV ++KI DFG++R++ S Y VG
Sbjct: 139 ASQIASGMVYLASQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYR--VGGHTM 196
Query: 163 ---RWYRAPEILLQSELYSSKADMWAMGAIMAELFTF 196
RW I+ + +++++D+W+ G I+ E+FT+
Sbjct: 197 LPIRWMPPESIMYRK--FTTESDVWSFGVILWEIFTY 231
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 108/204 (52%), Gaps = 14/204 (6%)
Query: 8 KELGRGAFGRVFQAF-DEHTGEAVAIKELKQRYASWEDCLNLREVKCLRKLNHSNIVKLK 66
+ LG G FG V+ + + HT VA+K LKQ S D L E +++L H +V+L
Sbjct: 28 ERLGAGQFGEVWMGYYNGHT--KVAVKSLKQGSMS-PDAF-LAEANLMKQLQHQRLVRLY 83
Query: 67 ELIQNNNRLYLVFECME-CNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQNGFFHR 125
++ +Y++ E ME +L + + ++ Q+ +G++++ + + HR
Sbjct: 84 AVV-TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHR 142
Query: 126 DLKPENLLVSQGI-IKIADFGLAREIKSGPPYTNYVGSRW---YRAPEILLQSELYSSKA 181
DL+ N+LVS + KIADFGLAR I+ T G+++ + APE + ++ K+
Sbjct: 143 DLRAANILVSDTLSCKIADFGLARLIEDN-EXTAREGAKFPIKWTAPEA-INYGTFTIKS 200
Query: 182 DMWAMGAIMAELFTFCPL-FPGAS 204
D+W+ G ++ E+ T + +PG +
Sbjct: 201 DVWSFGILLTEIVTHGRIPYPGMT 224
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 104/221 (47%), Gaps = 33/221 (14%)
Query: 8 KELGRGAFGRVFQAFDEH-TGEA----VAIKELKQRYASWEDCLNLREVKCLRKLNHSNI 62
K LG G FG+V +A H G A VA+K LK+ + E L E L+++NH ++
Sbjct: 29 KTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHV 88
Query: 63 VKLKELIQNNNRLYLVFECMECNLYQLMAARDRKL---------------FSEPEIKA-- 105
+KL + L L+ E + + RK+ P+ +A
Sbjct: 89 IKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALT 148
Query: 106 ------WLFQVFQGLSYMHQNGFFHRDLKPENLLVSQG-IIKIADFGLAREIKSGPPYTN 158
+ +Q+ QG+ Y+ + HRDL N+LV++G +KI+DFGL+R++ Y
Sbjct: 149 MGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSYVK 208
Query: 159 YVGSRW---YRAPEILLQSELYSSKADMWAMGAIMAELFTF 196
R + A E L +Y++++D+W+ G ++ E+ T
Sbjct: 209 RSQGRIPVKWMAIESLF-DHIYTTQSDVWSFGVLLWEIVTL 248
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 108/204 (52%), Gaps = 14/204 (6%)
Query: 8 KELGRGAFGRVFQAF-DEHTGEAVAIKELKQRYASWEDCLNLREVKCLRKLNHSNIVKLK 66
+ LG G FG V+ + + HT VA+K LKQ S D L E +++L H +V+L
Sbjct: 19 ERLGAGQFGEVWMGYYNGHT--KVAVKSLKQGSMS-PDAF-LAEANLMKQLQHQRLVRLY 74
Query: 67 ELIQNNNRLYLVFECME-CNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQNGFFHR 125
++ +Y++ E ME +L + + ++ Q+ +G++++ + + HR
Sbjct: 75 AVV-TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHR 133
Query: 126 DLKPENLLVSQGI-IKIADFGLAREIKSGPPYTNYVGSRW---YRAPEILLQSELYSSKA 181
DL+ N+LVS + KIADFGLAR I+ T G+++ + APE + ++ K+
Sbjct: 134 DLRAANILVSDTLSCKIADFGLARLIEDN-EXTAREGAKFPIKWTAPEA-INYGTFTIKS 191
Query: 182 DMWAMGAIMAELFTFCPL-FPGAS 204
D+W+ G ++ E+ T + +PG +
Sbjct: 192 DVWSFGILLTEIVTHGRIPYPGMT 215
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 108/204 (52%), Gaps = 14/204 (6%)
Query: 8 KELGRGAFGRVFQAF-DEHTGEAVAIKELKQRYASWEDCLNLREVKCLRKLNHSNIVKLK 66
+ LG G FG V+ + + HT VA+K LKQ S D L E +++L H +V+L
Sbjct: 21 ERLGAGQFGEVWMGYYNGHT--KVAVKSLKQGSMS-PDAF-LAEANLMKQLQHQRLVRLY 76
Query: 67 ELIQNNNRLYLVFECME-CNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQNGFFHR 125
++ +Y++ E ME +L + + ++ Q+ +G++++ + + HR
Sbjct: 77 AVV-TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHR 135
Query: 126 DLKPENLLVSQGI-IKIADFGLAREIKSGPPYTNYVGSRW---YRAPEILLQSELYSSKA 181
DL+ N+LVS + KIADFGLAR I+ T G+++ + APE + ++ K+
Sbjct: 136 DLRAANILVSDTLSCKIADFGLARLIEDN-EXTAREGAKFPIKWTAPEA-INYGTFTIKS 193
Query: 182 DMWAMGAIMAELFTFCPL-FPGAS 204
D+W+ G ++ E+ T + +PG +
Sbjct: 194 DVWSFGILLTEIVTHGRIPYPGMT 217
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/196 (32%), Positives = 104/196 (53%), Gaps = 10/196 (5%)
Query: 8 KELGRGAFGRVFQAFDEHTGEAVAIKEL-KQRYASWEDCLNLREVKCLRKLNHSNIVKLK 66
+++G G+FG V +A E G VA+K L +Q + + LREV +++L H NIV
Sbjct: 43 EKIGAGSFGTVHRA--EWHGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFM 100
Query: 67 ELIQNNNRLYLVFECM-ECNLYQLM-AARDRKLFSEPEIKAWLFQVFQGLSYMHQNG--F 122
+ L +V E + +LY+L+ + R+ E + + V +G++Y+H
Sbjct: 101 GAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNPPI 160
Query: 123 FHRDLKPENLLVSQG-IIKIADFGLAREIKSGPPYTNY-VGSRWYRAPEILLQSELYSSK 180
HRDLK NLLV + +K+ DFGL+R S + G+ + APE+ L+ E + K
Sbjct: 161 VHRDLKSPNLLVDKKYTVKVCDFGLSRLKASXFLXSKXAAGTPEWMAPEV-LRDEPSNEK 219
Query: 181 ADMWAMGAIMAELFTF 196
+D+++ G I+ EL T
Sbjct: 220 SDVYSFGVILWELATL 235
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 99/195 (50%), Gaps = 7/195 (3%)
Query: 2 DKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLNLREVKCLRKLNHSN 61
D + ELG G G VF+ + +G +A K + +RE++ L + N
Sbjct: 25 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 84
Query: 62 IVKLKELIQNNNRLYLVFECMEC-NLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQ- 119
IV ++ + + E M+ +L Q++ R E + V +GL+Y+ +
Sbjct: 85 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR--IPEQILGKVSIAVIKGLTYLREK 142
Query: 120 NGFFHRDLKPENLLV-SQGIIKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQSELYS 178
+ HRD+KP N+LV S+G IK+ DFG++ ++ ++VG+R Y +PE LQ YS
Sbjct: 143 HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMA-NSFVGTRSYMSPE-RLQGTHYS 200
Query: 179 SKADMWAMGAIMAEL 193
++D+W+MG + E+
Sbjct: 201 VQSDIWSMGLSLVEM 215
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 98/195 (50%), Gaps = 7/195 (3%)
Query: 2 DKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLNLREVKCLRKLNHSN 61
D + ELG G G VF+ + +G +A K + +RE++ L + N
Sbjct: 9 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 68
Query: 62 IVKLKELIQNNNRLYLVFECMEC-NLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQ- 119
IV ++ + + E M+ +L Q++ R E + V +GL+Y+ +
Sbjct: 69 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR--IPEQILGKVSIAVIKGLTYLREK 126
Query: 120 NGFFHRDLKPENLLV-SQGIIKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQSELYS 178
+ HRD+KP N+LV S+G IK+ DFG++ ++ +VG+R Y +PE LQ YS
Sbjct: 127 HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID-EMANEFVGTRSYMSPE-RLQGTHYS 184
Query: 179 SKADMWAMGAIMAEL 193
++D+W+MG + E+
Sbjct: 185 VQSDIWSMGLSLVEM 199
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 108/204 (52%), Gaps = 14/204 (6%)
Query: 8 KELGRGAFGRVFQAF-DEHTGEAVAIKELKQRYASWEDCLNLREVKCLRKLNHSNIVKLK 66
+ LG G FG V+ + + HT VA+K LKQ S D L E +++L H +V+L
Sbjct: 20 ERLGAGQFGEVWMGYYNGHT--KVAVKSLKQGSMS-PDAF-LAEANLMKQLQHQRLVRLY 75
Query: 67 ELIQNNNRLYLVFECME-CNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQNGFFHR 125
++ +Y++ E ME +L + + ++ Q+ +G++++ + + HR
Sbjct: 76 AVV-TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHR 134
Query: 126 DLKPENLLVSQGI-IKIADFGLAREIKSGPPYTNYVGSRW---YRAPEILLQSELYSSKA 181
DL+ N+LVS + KIADFGLAR I+ T G+++ + APE + ++ K+
Sbjct: 135 DLRAANILVSDTLSCKIADFGLARLIEDN-EXTAREGAKFPIKWTAPEA-INYGTFTIKS 192
Query: 182 DMWAMGAIMAELFTFCPL-FPGAS 204
D+W+ G ++ E+ T + +PG +
Sbjct: 193 DVWSFGILLTEIVTHGRIPYPGMT 216
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 108/204 (52%), Gaps = 14/204 (6%)
Query: 8 KELGRGAFGRVFQAF-DEHTGEAVAIKELKQRYASWEDCLNLREVKCLRKLNHSNIVKLK 66
+ LG G FG V+ + + HT VA+K LKQ S D L E +++L H +V+L
Sbjct: 19 ERLGAGQFGEVWMGYYNGHT--KVAVKSLKQGSMS-PDAF-LAEANLMKQLQHQRLVRLY 74
Query: 67 ELIQNNNRLYLVFECME-CNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQNGFFHR 125
++ +Y++ E ME +L + + ++ Q+ +G++++ + + HR
Sbjct: 75 AVV-TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHR 133
Query: 126 DLKPENLLVSQGI-IKIADFGLAREIKSGPPYTNYVGSRW---YRAPEILLQSELYSSKA 181
DL+ N+LVS + KIADFGLAR I+ T G+++ + APE + ++ K+
Sbjct: 134 DLRAANILVSDTLSCKIADFGLARLIEDN-EXTAREGAKFPIKWTAPEA-INYGTFTIKS 191
Query: 182 DMWAMGAIMAELFTFCPL-FPGAS 204
D+W+ G ++ E+ T + +PG +
Sbjct: 192 DVWSFGILLTEIVTHGRIPYPGMT 215
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 104/222 (46%), Gaps = 15/222 (6%)
Query: 2 DKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLNLR---EVKCLRKLN 58
D+Y + LG G V A D VA+K L+ A + LR E + LN
Sbjct: 12 DRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLA-RDPSFYLRFRREAQNAAALN 70
Query: 59 HSNIVKLKELIQNNNRL----YLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGL 114
H IV + + Y+V E ++ + + + + + I+ + Q L
Sbjct: 71 HPAIVAVYATGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEV-IADACQAL 129
Query: 115 SYMHQNGFFHRDLKPENLLVS-QGIIKIADFGLAREI-KSGPPYTN---YVGSRWYRAPE 169
++ HQNG HRD+KP N+++S +K+ DFG+AR I SG T +G+ Y +PE
Sbjct: 130 NFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPE 189
Query: 170 ILLQSELYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYK 211
+ + +++D++++G ++ E+ T P F G S Y+
Sbjct: 190 -QARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQ 230
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 103/208 (49%), Gaps = 25/208 (12%)
Query: 6 GFKELGRGAFGRVFQAFDEHTGEAV---------AIKELKQRYASWEDCLNLREVKCLRK 56
G ++G G FG V++ + +T AV +ELKQ++ +E+K + K
Sbjct: 35 GGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELKQQFD--------QEIKVMAK 86
Query: 57 LNHSNIVKLKELIQNNNRLYLVFECM-ECNLYQLMAARDRKLFSEPEIKAWLFQ-VFQGL 114
H N+V+L + + L LV+ M +L ++ D ++ + Q G+
Sbjct: 87 CQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGI 146
Query: 115 SYMHQNGFFHRDLKPENLLVSQGII-KIADFGLAR---EIKSGPPYTNYVGSRWYRAPEI 170
+++H+N HRD+K N+L+ + KI+DFGLAR + VG+ Y APE
Sbjct: 147 NFLHENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXXRIVGTTAYMAPEA 206
Query: 171 LLQSELYSSKADMWAMGAIMAELFTFCP 198
L+ E+ + K+D+++ G ++ E+ T P
Sbjct: 207 -LRGEI-TPKSDIYSFGVVLLEIITGLP 232
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 103/208 (49%), Gaps = 25/208 (12%)
Query: 6 GFKELGRGAFGRVFQAFDEHTGEAV---------AIKELKQRYASWEDCLNLREVKCLRK 56
G ++G G FG V++ + +T AV +ELKQ++ +E+K + K
Sbjct: 29 GGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELKQQFD--------QEIKVMAK 80
Query: 57 LNHSNIVKLKELIQNNNRLYLVFECM-ECNLYQLMAARDRKLFSEPEIKAWLFQ-VFQGL 114
H N+V+L + + L LV+ M +L ++ D ++ + Q G+
Sbjct: 81 CQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGI 140
Query: 115 SYMHQNGFFHRDLKPENLLVSQGII-KIADFGLAR---EIKSGPPYTNYVGSRWYRAPEI 170
+++H+N HRD+K N+L+ + KI+DFGLAR + VG+ Y APE
Sbjct: 141 NFLHENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVMXXRIVGTTAYMAPEA 200
Query: 171 LLQSELYSSKADMWAMGAIMAELFTFCP 198
L+ E+ + K+D+++ G ++ E+ T P
Sbjct: 201 -LRGEI-TPKSDIYSFGVVLLEIITGLP 226
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 107/213 (50%), Gaps = 13/213 (6%)
Query: 10 LGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLNLR-EVKCLRKLNHSNIVKLKEL 68
+G G+FG V++ + G+ VA+K LK + E R EV LRK H NI+
Sbjct: 44 IGSGSFGTVYKG--KWHGD-VAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGY 100
Query: 69 IQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQNGFFHRDLK 128
+ +N + C +LY+ + ++ K F ++ Q QG+ Y+H HRD+K
Sbjct: 101 MTKDNLAIVTQWCEGSSLYKHLHVQETK-FQMFQLIDIARQTAQGMDYLHAKNIIHRDMK 159
Query: 129 PENLLVSQGI-IKIADFGLAREIKSGPPYTNYV----GSRWYRAPEILLQSEL--YSSKA 181
N+ + +G+ +KI DFGLA +KS + V GS + APE++ + +S ++
Sbjct: 160 SNNIFLHEGLTVKIGDFGLA-TVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQS 218
Query: 182 DMWAMGAIMAELFTFCPLFPGASEADQMYKICG 214
D+++ G ++ EL T + + DQ+ + G
Sbjct: 219 DVYSYGIVLYELMTGELPYSHINNRDQIIFMVG 251
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 111/229 (48%), Gaps = 19/229 (8%)
Query: 2 DKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLNLREVKCLRKLNHSN 61
D + ELG G G V + +G +A K + +RE++ L + N
Sbjct: 16 DDFERISELGAGNGGVVTKVQHRPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 75
Query: 62 IVKLKELIQNNNRLYLVFECMEC-NLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQ- 119
IV ++ + + E M+ +L Q++ ++ K E + V +GL+Y+ +
Sbjct: 76 IVGFYGAFYSDGEISICMEHMDGGSLDQVL--KEAKRIPEEILGKVSIAVLRGLAYLREK 133
Query: 120 NGFFHRDLKPENLLV-SQGIIKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQSELYS 178
+ HRD+KP N+LV S+G IK+ DFG++ ++ ++VG+R Y APE LQ YS
Sbjct: 134 HQIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMA-NSFVGTRSYMAPE-RLQGTHYS 191
Query: 179 SKADMWAMGAIMAEL----FTFCPLFPGASEADQMYKICGVLGSPTMDS 223
++D+W+MG + EL + P P A E + ++ G P +D
Sbjct: 192 VQSDIWSMGLSLVELAVGRYPIPP--PDAKELEAIF------GRPVVDG 232
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 61/196 (31%), Positives = 105/196 (53%), Gaps = 10/196 (5%)
Query: 8 KELGRGAFGRVFQAFDEHTGEAVAIKEL-KQRYASWEDCLNLREVKCLRKLNHSNIVKLK 66
+++G G+FG V +A E G VA+K L +Q + + LREV +++L H NIV
Sbjct: 43 EKIGAGSFGTVHRA--EWHGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFM 100
Query: 67 ELIQNNNRLYLVFECM-ECNLYQLM-AARDRKLFSEPEIKAWLFQVFQGLSYMHQNG--F 122
+ L +V E + +LY+L+ + R+ E + + V +G++Y+H
Sbjct: 101 GAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNPPI 160
Query: 123 FHRDLKPENLLVSQG-IIKIADFGLAR-EIKSGPPYTNYVGSRWYRAPEILLQSELYSSK 180
HR+LK NLLV + +K+ DFGL+R + + + G+ + APE+ L+ E + K
Sbjct: 161 VHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFLSSKSAAGTPEWMAPEV-LRDEPSNEK 219
Query: 181 ADMWAMGAIMAELFTF 196
+D+++ G I+ EL T
Sbjct: 220 SDVYSFGVILWELATL 235
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 110/225 (48%), Gaps = 21/225 (9%)
Query: 8 KELGRGAFGRVFQAFDEHTGE-----AVAIKELKQRYASWEDCLNLREVKCLRKLN-HSN 61
K LG GAFG+V +A G+ VA+K LK + E + E+K + L H N
Sbjct: 44 KTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHEN 103
Query: 62 IVKLKELIQNNNRLYLVFE-CMECNLYQLM-----AARDRKLFSEPEIKAWLF---QVFQ 112
IV L + + ++ E C +L + A D++ E++ L QV Q
Sbjct: 104 IVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQ 163
Query: 113 GLSYMHQNGFFHRDLKPENLLVSQG-IIKIADFGLAREIKSGPPYTNYVGSRW---YRAP 168
G++++ HRD+ N+L++ G + KI DFGLAR+I + Y +R + AP
Sbjct: 164 GMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAP 223
Query: 169 EILLQSELYSSKADMWAMGAIMAELFTF-CPLFPGASEADQMYKI 212
E + +Y+ ++D+W+ G ++ E+F+ +PG + YK+
Sbjct: 224 ESIFDC-VYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKL 267
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 76/293 (25%), Positives = 120/293 (40%), Gaps = 39/293 (13%)
Query: 2 DKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLNLREVKC-LRKLNHS 60
D ELGRGA+G V + +G+ A+K ++ S E L ++ R ++
Sbjct: 34 DDLEPIXELGRGAYGVVEKXRHVPSGQIXAVKRIRATVNSQEQKRLLXDLDISXRTVDCP 93
Query: 61 NIVKLKELIQNNNRLYLVFECMECNLYQLMAARDRKLFSEPE--IKAWLFQVFQGLSYMH 118
V + +++ E + +L + K + PE + + + L ++H
Sbjct: 94 FTVTFYGALFREGDVWICXELXDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLH 153
Query: 119 QN-GFFHRDLKPENLLVSQ-GIIKIADFGLAREIKSGPPYTNYVGSRWYRAPEIL---LQ 173
HRD+KP N+L++ G +K DFG++ + G + Y APE + L
Sbjct: 154 SKLSVIHRDVKPSNVLINALGQVKXCDFGISGYLVDDVAKDIDAGCKPYXAPERINPELN 213
Query: 174 SELYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWADGLRQAR- 232
+ YS K+D+W++G EL +L P DSW +Q +
Sbjct: 214 QKGYSVKSDIWSLGITXIEL--------------------AILRFP-YDSWGTPFQQLKQ 252
Query: 233 AIKYQFPQLPRANLSALMPSASQDAISLFESLCSWDPSK-RPTAAEALQHPFF 284
++ PQLP SA F S C SK RPT E QHPFF
Sbjct: 253 VVEEPSPQLPADKFSAEFVD--------FTSQCLKKNSKERPTYPELXQHPFF 297
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 106/215 (49%), Gaps = 29/215 (13%)
Query: 8 KELGRGAFGRVFQA--FDEHTGE---AVAIKELKQRYASWEDCLNLREVKCLR-KLNHSN 61
+ELG FG+V++ F GE AVAIK LK + A R LR +L H N
Sbjct: 32 EELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDK-AEGPLREEFRHEAMLRARLQHPN 90
Query: 62 IVKLKELIQNNNRLYLVFE-CMECNLYQLMAAR-----------DRKLFSE---PEIKAW 106
+V L ++ + L ++F C +L++ + R DR + S P+
Sbjct: 91 VVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHL 150
Query: 107 LFQVFQGLSYMHQNGFFHRDLKPENLLVSQGI-IKIADFGLAREIKSGPPY----TNYVG 161
+ Q+ G+ Y+ + H+DL N+LV + +KI+D GL RE+ + Y + +
Sbjct: 151 VAQIAAGMEYLSSHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSLLP 210
Query: 162 SRWYRAPEILLQSELYSSKADMWAMGAIMAELFTF 196
RW APE ++ + +S +D+W+ G ++ E+F++
Sbjct: 211 IRWM-APEAIMYGK-FSIDSDIWSYGVVLWEVFSY 243
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 110/225 (48%), Gaps = 21/225 (9%)
Query: 8 KELGRGAFGRVFQAFDEHTGE-----AVAIKELKQRYASWEDCLNLREVKCLRKLN-HSN 61
K LG GAFG+V +A G+ VA+K LK + E + E+K + L H N
Sbjct: 52 KTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHEN 111
Query: 62 IVKLKELIQNNNRLYLVFE-CMECNLYQLM-----AARDRKLFSEPEIKAWLF---QVFQ 112
IV L + + ++ E C +L + A D++ E++ L QV Q
Sbjct: 112 IVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQ 171
Query: 113 GLSYMHQNGFFHRDLKPENLLVSQG-IIKIADFGLAREIKSGPPYTNYVGSRW---YRAP 168
G++++ HRD+ N+L++ G + KI DFGLAR+I + Y +R + AP
Sbjct: 172 GMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAP 231
Query: 169 EILLQSELYSSKADMWAMGAIMAELFTF-CPLFPGASEADQMYKI 212
E + +Y+ ++D+W+ G ++ E+F+ +PG + YK+
Sbjct: 232 ESIFDC-VYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKL 275
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 106/215 (49%), Gaps = 29/215 (13%)
Query: 8 KELGRGAFGRVFQA--FDEHTGE---AVAIKELKQRYASWEDCLNLREVKCLR-KLNHSN 61
+ELG FG+V++ F GE AVAIK LK + A R LR +L H N
Sbjct: 15 EELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDK-AEGPLREEFRHEAMLRARLQHPN 73
Query: 62 IVKLKELIQNNNRLYLVFE-CMECNLYQLMAAR-----------DRKLFSE---PEIKAW 106
+V L ++ + L ++F C +L++ + R DR + S P+
Sbjct: 74 VVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHL 133
Query: 107 LFQVFQGLSYMHQNGFFHRDLKPENLLVSQGI-IKIADFGLAREIKSGPPY----TNYVG 161
+ Q+ G+ Y+ + H+DL N+LV + +KI+D GL RE+ + Y + +
Sbjct: 134 VAQIAAGMEYLSSHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSLLP 193
Query: 162 SRWYRAPEILLQSELYSSKADMWAMGAIMAELFTF 196
RW APE ++ + +S +D+W+ G ++ E+F++
Sbjct: 194 IRWM-APEAIMYGK-FSIDSDIWSYGVVLWEVFSY 226
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 96/209 (45%), Gaps = 21/209 (10%)
Query: 7 FKELGRGAFGRVFQAF-----DEHTGEAVAIKELKQRYASWEDCLNLREVKCLRKLNHSN 61
+ LG GAFG V++ ++ + VA+K L + Y+ ++ L E + K NH N
Sbjct: 50 IRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVYSEQDELDFLMEALIISKFNHQN 109
Query: 62 IVKLKELIQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWL------FQVFQGLS 115
IV+ + + +++ E M + R S+P A L + G
Sbjct: 110 IVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQ 169
Query: 116 YMHQNGFFHRDLKPEN-LLVSQG---IIKIADFGLAREIKSGPPYTN----YVGSRWYRA 167
Y+ +N F HRD+ N LL G + KI DFG+AR+I Y + +W
Sbjct: 170 YLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWM-P 228
Query: 168 PEILLQSELYSSKADMWAMGAIMAELFTF 196
PE ++ +++SK D W+ G ++ E+F+
Sbjct: 229 PEAFMEG-IFTSKTDTWSFGVLLWEIFSL 256
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 96/198 (48%), Gaps = 6/198 (3%)
Query: 2 DKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKEL-KQRYASWEDCLNL-REVKCLRKLNH 59
D + + +G+G+FG+V T + A+K + KQ+ + N+ +E++ ++ L H
Sbjct: 15 DHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEH 74
Query: 60 SNIVKLKELIQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQ 119
+V L Q+ +++V + + + ++ F E +K ++ ++ L Y+
Sbjct: 75 PFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQQNVH-FKEETVKLFICELVMALDYLQN 133
Query: 120 NGFFHRDLKPENLLVSQ-GIIKIADFGLAREIKSGPPYTNYVGSRWYRAPEIL--LQSEL 176
HRD+KP+N+L+ + G + I DF +A + T G++ Y APE+ +
Sbjct: 134 QRIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRETQITTMAGTKPYMAPEMFSSRKGAG 193
Query: 177 YSSKADMWAMGAIMAELF 194
YS D W++G EL
Sbjct: 194 YSFAVDWWSLGVTAYELL 211
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 103/221 (46%), Gaps = 33/221 (14%)
Query: 8 KELGRGAFGRVFQAFDEH-TGEA----VAIKELKQRYASWEDCLNLREVKCLRKLNHSNI 62
K LG G FG+V +A H G A VA+K LK+ + E L E L+++NH ++
Sbjct: 29 KTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHV 88
Query: 63 VKLKELIQNNNRLYLVFECMECNLYQLMAARDRKL---------------FSEPEIKA-- 105
+KL + L L+ E + + RK+ P+ +A
Sbjct: 89 IKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALT 148
Query: 106 ------WLFQVFQGLSYMHQNGFFHRDLKPENLLVSQG-IIKIADFGLAREIKSGPPYTN 158
+ +Q+ QG+ Y+ + HRDL N+LV++G +KI+DFGL+R++
Sbjct: 149 MGDLISFAWQISQGMQYLAEMSLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSXVK 208
Query: 159 YVGSRW---YRAPEILLQSELYSSKADMWAMGAIMAELFTF 196
R + A E L +Y++++D+W+ G ++ E+ T
Sbjct: 209 RSQGRIPVKWMAIESLF-DHIYTTQSDVWSFGVLLWEIVTL 248
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 96/212 (45%), Gaps = 13/212 (6%)
Query: 9 ELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLNLR-EVKCLRKLNHSNIVKL-- 65
E+GRG+F V++ D T VA EL+ R + + + E + L+ L H NIV+
Sbjct: 33 EIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEXLKGLQHPNIVRFYD 92
Query: 66 --KELIQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQNG-- 121
+ ++ + LV E + R K+ +++W Q+ +GL ++H
Sbjct: 93 SWESTVKGKKCIVLVTELXTSGTLKTYLKR-FKVXKIKVLRSWCRQILKGLQFLHTRTPP 151
Query: 122 FFHRDLKPENLLVS--QGIIKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQSELYSS 179
HRDLK +N+ ++ G +KI D GLA +K +G+ + APE E Y
Sbjct: 152 IIHRDLKCDNIFITGPTGSVKIGDLGLAT-LKRASFAKAVIGTPEFXAPEXY--EEKYDE 208
Query: 180 KADMWAMGAIMAELFTFCPLFPGASEADQMYK 211
D++A G E T + A Q+Y+
Sbjct: 209 SVDVYAFGXCXLEXATSEYPYSECQNAAQIYR 240
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 107/204 (52%), Gaps = 14/204 (6%)
Query: 8 KELGRGAFGRVFQAF-DEHTGEAVAIKELKQRYASWEDCLNLREVKCLRKLNHSNIVKLK 66
+ LG G G V+ + + HT VA+K LKQ S D L E +++L H +V+L
Sbjct: 19 ERLGAGQAGEVWMGYYNGHT--KVAVKSLKQGSMS-PDAF-LAEANLMKQLQHQRLVRLY 74
Query: 67 ELIQNNNRLYLVFECME-CNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQNGFFHR 125
++ +Y++ E ME +L + + ++ Q+ +G++++ + + HR
Sbjct: 75 AVV-TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHR 133
Query: 126 DLKPENLLVSQGI-IKIADFGLAREIKSGPPYTNYVGSRW---YRAPEILLQSELYSSKA 181
DL+ N+LVS + KIADFGLAR I+ T G+++ + APE + ++ K+
Sbjct: 134 DLRAANILVSDTLSCKIADFGLARLIEDA-EXTAREGAKFPIKWTAPEA-INYGTFTIKS 191
Query: 182 DMWAMGAIMAELFTFCPL-FPGAS 204
D+W+ G ++ E+ T + +PG +
Sbjct: 192 DVWSFGILLTEIVTHGRIPYPGMT 215
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 103/221 (46%), Gaps = 33/221 (14%)
Query: 8 KELGRGAFGRVFQAFDEH-TGEA----VAIKELKQRYASWEDCLNLREVKCLRKLNHSNI 62
K LG G FG+V +A H G A VA+K LK+ + E L E L+++NH ++
Sbjct: 29 KTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHV 88
Query: 63 VKLKELIQNNNRLYLVFECMECNLYQLMAARDRKL---------------FSEPEIKA-- 105
+KL + L L+ E + + RK+ P+ +A
Sbjct: 89 IKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALT 148
Query: 106 ------WLFQVFQGLSYMHQNGFFHRDLKPENLLVSQG-IIKIADFGLAREIKSGPPYTN 158
+ +Q+ QG+ Y+ + HRDL N+LV++G +KI+DFGL+R++
Sbjct: 149 MGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSXVK 208
Query: 159 YVGSRW---YRAPEILLQSELYSSKADMWAMGAIMAELFTF 196
R + A E L +Y++++D+W+ G ++ E+ T
Sbjct: 209 RSQGRIPVKWMAIESLF-DHIYTTQSDVWSFGVLLWEIVTL 248
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 101/214 (47%), Gaps = 11/214 (5%)
Query: 8 KELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLNLR-EVKCLRKLNHSNIVKLK 66
+ +G G+FG V++ + G+ VA+K L + + + EV LRK H NI+
Sbjct: 30 QRIGSGSFGTVYKG--KWHGD-VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFM 86
Query: 67 ELIQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQNGFFHRD 126
+ C +LY + A + K F ++ Q +G+ Y+H HRD
Sbjct: 87 GYSTKPQLAIVTQWCEGSSLYHHLHASETK-FEMKKLIDIARQTARGMDYLHAKSIIHRD 145
Query: 127 LKPENLLVSQ-GIIKIADFGLAREIK--SGP-PYTNYVGSRWYRAPEILL--QSELYSSK 180
LK N+ + + +KI DFGLA E SG + GS + APE++ S YS +
Sbjct: 146 LKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQ 205
Query: 181 ADMWAMGAIMAELFTFCPLFPGASEADQMYKICG 214
+D++A G ++ EL T + + DQ+ ++ G
Sbjct: 206 SDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVG 239
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 60/195 (30%), Positives = 92/195 (47%), Gaps = 9/195 (4%)
Query: 9 ELGRGAFGRVFQAFDEHTGEA--VAIKELKQRYASWEDCLNLREVKCLRKLNHSNIVKLK 66
ELG G FG V Q + VAIK LKQ + +RE + + +L++ IV+L
Sbjct: 17 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLI 76
Query: 67 ELIQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQNGFFHRD 126
+ Q L LV E R+ + L QV G+ Y+ + F HRD
Sbjct: 77 GVCQAEA-LMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRD 135
Query: 127 LKPEN-LLVSQGIIKIADFGLAREIKSGPP-YTNYVGSRW---YRAPEILLQSELYSSKA 181
L N LLV++ KI+DFGL++ + + YT +W + APE + +SS++
Sbjct: 136 LAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPEC-INFRKFSSRS 194
Query: 182 DMWAMGAIMAELFTF 196
D+W+ G M E ++
Sbjct: 195 DVWSYGVTMWEALSY 209
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 96/209 (45%), Gaps = 21/209 (10%)
Query: 7 FKELGRGAFGRVFQAF-----DEHTGEAVAIKELKQRYASWEDCLNLREVKCLRKLNHSN 61
+ LG GAFG V++ ++ + VA+K L + + ++ L E + KLNH N
Sbjct: 36 IRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQN 95
Query: 62 IVKLKELIQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWL------FQVFQGLS 115
IV+ + + +++ E M + R S+P A L + G
Sbjct: 96 IVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQ 155
Query: 116 YMHQNGFFHRDLKPEN-LLVSQG---IIKIADFGLAREIKSGPPYTN----YVGSRWYRA 167
Y+ +N F HRD+ N LL G + KI DFG+AR+I Y + +W
Sbjct: 156 YLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWM-P 214
Query: 168 PEILLQSELYSSKADMWAMGAIMAELFTF 196
PE ++ +++SK D W+ G ++ E+F+
Sbjct: 215 PEAFMEG-IFTSKTDTWSFGVLLWEIFSL 242
>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839
pdb|2IO6|A Chain A, Wee1 Kinase Complexed With Inhibitor Pd330961
Length = 287
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 80/312 (25%), Positives = 123/312 (39%), Gaps = 70/312 (22%)
Query: 3 KYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLN-LREVKCLRKL-NHS 60
++ +++G G FG VF+ G AIK K+ A D N LREV L HS
Sbjct: 10 EFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHS 69
Query: 61 NIVKLKELIQNNNRLYLVFECMECNLYQLMAA-----RDRKLFSEPEIKAWLFQVFQGLS 115
++V+ ++ + + E CN L A R F E E+K L QV +GL
Sbjct: 70 HVVRYFSAWAEDDHMLIQNEY--CNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLR 127
Query: 116 YMHQNGFFHRDLKPENLLVSQGII--------------------KIADFGLAREIKSGPP 155
Y+H H D+KP N+ +S+ I KI D G I S P
Sbjct: 128 YIHSMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRISS--P 185
Query: 156 YTNYVGSRWYRAPEILLQSELYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGV 215
SR+ A E+L ++ + KAD++A+ + +C
Sbjct: 186 QVEEGDSRFL-ANEVLQENYTHLPKADIFALALTV---------------------VCAA 223
Query: 216 LGSP---TMDSWADGLRQARAIKYQFPQLPRANLSALMPSASQDAISLFESLCSWDPSKR 272
P D W + +RQ R P++P+ SQ+ L + + DP +R
Sbjct: 224 GAEPLPRNGDQWHE-IRQGR-----LPRIPQV--------LSQEFTELLKVMIHPDPERR 269
Query: 273 PTAAEALQHPFF 284
P+A ++H
Sbjct: 270 PSAMALVKHSVL 281
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 96/209 (45%), Gaps = 21/209 (10%)
Query: 7 FKELGRGAFGRVFQAF-----DEHTGEAVAIKELKQRYASWEDCLNLREVKCLRKLNHSN 61
+ LG GAFG V++ ++ + VA+K L + + ++ L E + KLNH N
Sbjct: 50 IRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQN 109
Query: 62 IVKLKELIQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWL------FQVFQGLS 115
IV+ + + +++ E M + R S+P A L + G
Sbjct: 110 IVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQ 169
Query: 116 YMHQNGFFHRDLKPEN-LLVSQG---IIKIADFGLAREIKSGPPYTN----YVGSRWYRA 167
Y+ +N F HRD+ N LL G + KI DFG+AR+I Y + +W
Sbjct: 170 YLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWM-P 228
Query: 168 PEILLQSELYSSKADMWAMGAIMAELFTF 196
PE ++ +++SK D W+ G ++ E+F+
Sbjct: 229 PEAFMEG-IFTSKTDTWSFGVLLWEIFSL 256
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 80/312 (25%), Positives = 123/312 (39%), Gaps = 70/312 (22%)
Query: 3 KYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLN-LREVKCLRKLN-HS 60
++ +++G G FG VF+ G AIK K+ A D N LREV L HS
Sbjct: 12 EFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHS 71
Query: 61 NIVKLKELIQNNNRLYLVFECMECNLYQLMAA-----RDRKLFSEPEIKAWLFQVFQGLS 115
++V+ ++ + + E CN L A R F E E+K L QV +GL
Sbjct: 72 HVVRYFSAWAEDDHMLIQNEY--CNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLR 129
Query: 116 YMHQNGFFHRDLKPENLLVSQGII--------------------KIADFGLAREIKSGPP 155
Y+H H D+KP N+ +S+ I KI D G I S P
Sbjct: 130 YIHSMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRISS--P 187
Query: 156 YTNYVGSRWYRAPEILLQSELYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGV 215
SR + A E+L ++ + KAD++A+ + +C
Sbjct: 188 QVEEGDSR-FLANEVLQENYTHLPKADIFALALTV---------------------VCAA 225
Query: 216 LGSP---TMDSWADGLRQARAIKYQFPQLPRANLSALMPSASQDAISLFESLCSWDPSKR 272
P D W + +RQ R P++P+ SQ+ L + + DP +R
Sbjct: 226 GAEPLPRNGDQWHE-IRQGR-----LPRIPQV--------LSQEFTELLKVMIHPDPERR 271
Query: 273 PTAAEALQHPFF 284
P+A ++H
Sbjct: 272 PSAMALVKHSVL 283
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 102/203 (50%), Gaps = 18/203 (8%)
Query: 7 FKELGRGAFGRVFQA-FDEHTGE--AVAIKELKQRYASWEDCLN--LREVKCLRKLNHSN 61
++LG G+FG V + +D +G+ +VA+K LK S + ++ +REV + L+H N
Sbjct: 23 LEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRN 82
Query: 62 IVKLKELIQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQNG 121
+++L ++ + +V E + + F + + QV +G+ Y+
Sbjct: 83 LIRLYGVVLTPP-MKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKR 141
Query: 122 FFHRDLKPENLLV-SQGIIKIADFGLAREIKSGPPYTNYVGSRWYR-------APEILLQ 173
F HRDL NLL+ ++ ++KI DFGL R + P ++ + +R APE L+
Sbjct: 142 FIHRDLAARNLLLATRDLVKIGDFGLMRAL---PQNDDHXVMQEHRKVPFAWCAPES-LK 197
Query: 174 SELYSSKADMWAMGAIMAELFTF 196
+ +S +D W G + E+FT+
Sbjct: 198 TRTFSHASDTWMFGVTLWEMFTY 220
>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396
pdb|3BIZ|A Chain A, Wee1 Kinase Complex With Inhibitor Pd331618
pdb|3CQE|A Chain A, Wee1 Kinase Complex With Inhibitor Pd074291
pdb|3CR0|A Chain A, Wee1 Kinase Complex With Inhibitor Pd259_809
Length = 287
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 80/312 (25%), Positives = 123/312 (39%), Gaps = 70/312 (22%)
Query: 3 KYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLN-LREVKCLRKLN-HS 60
++ +++G G FG VF+ G AIK K+ A D N LREV L HS
Sbjct: 10 EFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHS 69
Query: 61 NIVKLKELIQNNNRLYLVFECMECNLYQLMAA-----RDRKLFSEPEIKAWLFQVFQGLS 115
++V+ ++ + + E CN L A R F E E+K L QV +GL
Sbjct: 70 HVVRYFSAWAEDDHMLIQNEY--CNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLR 127
Query: 116 YMHQNGFFHRDLKPENLLVSQGII--------------------KIADFGLAREIKSGPP 155
Y+H H D+KP N+ +S+ I KI D G I S P
Sbjct: 128 YIHSMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRISS--P 185
Query: 156 YTNYVGSRWYRAPEILLQSELYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGV 215
SR + A E+L ++ + KAD++A+ + +C
Sbjct: 186 QVEEGDSR-FLANEVLQENYTHLPKADIFALALTV---------------------VCAA 223
Query: 216 LGSP---TMDSWADGLRQARAIKYQFPQLPRANLSALMPSASQDAISLFESLCSWDPSKR 272
P D W + +RQ R P++P+ SQ+ L + + DP +R
Sbjct: 224 GAEPLPRNGDQWHE-IRQGR-----LPRIPQV--------LSQEFTELLKVMIHPDPERR 269
Query: 273 PTAAEALQHPFF 284
P+A ++H
Sbjct: 270 PSAMALVKHSVL 281
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 92/197 (46%), Gaps = 16/197 (8%)
Query: 10 LGRGAFGRVFQAFDEHTGEAVAIKEL-KQRYASW----EDCLNLREVKCLRKLN----HS 60
LG+G FG VF VAIK + + R W + EV L K+ H
Sbjct: 39 LGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHP 98
Query: 61 NIVKLKELIQNNNRLYLVFE--CMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMH 118
+++L + + LV E +L+ + ++ E + + QV + + H
Sbjct: 99 GVIRLLDWFETQEGFMLVLERPLPAQDLFDYIT--EKGPLGEGPSRCFFGQVVAAIQHCH 156
Query: 119 QNGFFHRDLKPENLLVS--QGIIKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQSEL 176
G HRD+K EN+L+ +G K+ DFG + + PYT++ G+R Y PE + + +
Sbjct: 157 SRGVVHRDIKDENILIDLRRGCAKLIDFG-SGALLHDEPYTDFDGTRVYSPPEWISRHQY 215
Query: 177 YSSKADMWAMGAIMAEL 193
++ A +W++G ++ ++
Sbjct: 216 HALPATVWSLGILLYDM 232
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 101/214 (47%), Gaps = 11/214 (5%)
Query: 8 KELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLNLR-EVKCLRKLNHSNIVKLK 66
+ +G G+FG V++ + G+ VA+K L + + + EV LRK H NI+
Sbjct: 30 QRIGSGSFGTVYKG--KWHGD-VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFM 86
Query: 67 ELIQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQNGFFHRD 126
+ C +LY + A + K F ++ Q +G+ Y+H HRD
Sbjct: 87 GYSTAPQLAIVTQWCEGSSLYHHLHASETK-FEMKKLIDIARQTARGMDYLHAKSIIHRD 145
Query: 127 LKPENLLVSQ-GIIKIADFGLAREIK--SGP-PYTNYVGSRWYRAPEILL--QSELYSSK 180
LK N+ + + +KI DFGLA E SG + GS + APE++ S YS +
Sbjct: 146 LKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQ 205
Query: 181 ADMWAMGAIMAELFTFCPLFPGASEADQMYKICG 214
+D++A G ++ EL T + + DQ+ ++ G
Sbjct: 206 SDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVG 239
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 102/203 (50%), Gaps = 18/203 (8%)
Query: 7 FKELGRGAFGRVFQA-FDEHTGE--AVAIKELKQRYASWEDCLN--LREVKCLRKLNHSN 61
++LG G+FG V + +D +G+ +VA+K LK S + ++ +REV + L+H N
Sbjct: 23 LEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRN 82
Query: 62 IVKLKELIQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQNG 121
+++L ++ + +V E + + F + + QV +G+ Y+
Sbjct: 83 LIRLYGVVLTPP-MKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKR 141
Query: 122 FFHRDLKPENLLV-SQGIIKIADFGLAREIKSGPPYTNYVGSRWYR-------APEILLQ 173
F HRDL NLL+ ++ ++KI DFGL R + P ++ + +R APE L+
Sbjct: 142 FIHRDLAARNLLLATRDLVKIGDFGLMRAL---PQNDDHYVMQEHRKVPFAWCAPES-LK 197
Query: 174 SELYSSKADMWAMGAIMAELFTF 196
+ +S +D W G + E+FT+
Sbjct: 198 TRTFSHASDTWMFGVTLWEMFTY 220
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 59/195 (30%), Positives = 92/195 (47%), Gaps = 9/195 (4%)
Query: 9 ELGRGAFGRVFQAFDEHTGEA--VAIKELKQRYASWEDCLNLREVKCLRKLNHSNIVKLK 66
ELG G FG V Q + VAIK LKQ + +RE + + +L++ IV+L
Sbjct: 343 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLI 402
Query: 67 ELIQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQNGFFHRD 126
+ Q L LV E R+ + L QV G+ Y+ + F HR+
Sbjct: 403 GVCQAEA-LMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRN 461
Query: 127 LKPEN-LLVSQGIIKIADFGLAREIKSGPP-YTNYVGSRW---YRAPEILLQSELYSSKA 181
L N LLV++ KI+DFGL++ + + YT +W + APE + +SS++
Sbjct: 462 LAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPEC-INFRKFSSRS 520
Query: 182 DMWAMGAIMAELFTF 196
D+W+ G M E ++
Sbjct: 521 DVWSYGVTMWEALSY 535
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 102/203 (50%), Gaps = 18/203 (8%)
Query: 7 FKELGRGAFGRVFQA-FDEHTGE--AVAIKELKQRYASWEDCLN--LREVKCLRKLNHSN 61
++LG G+FG V + +D +G+ +VA+K LK S + ++ +REV + L+H N
Sbjct: 13 LEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRN 72
Query: 62 IVKLKELIQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQNG 121
+++L ++ + +V E + + F + + QV +G+ Y+
Sbjct: 73 LIRLYGVVLTPP-MKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKR 131
Query: 122 FFHRDLKPENLLV-SQGIIKIADFGLAREIKSGPPYTNYVGSRWYR-------APEILLQ 173
F HRDL NLL+ ++ ++KI DFGL R + P ++ + +R APE L+
Sbjct: 132 FIHRDLAARNLLLATRDLVKIGDFGLMRAL---PQNDDHXVMQEHRKVPFAWCAPES-LK 187
Query: 174 SELYSSKADMWAMGAIMAELFTF 196
+ +S +D W G + E+FT+
Sbjct: 188 TRTFSHASDTWMFGVTLWEMFTY 210
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 88/192 (45%), Gaps = 10/192 (5%)
Query: 7 FKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWED-CLNLREVKCLRKLN-HSNIVK 64
LG G++G VF+ + G A+K + +D L EV K+ H V+
Sbjct: 62 LSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVR 121
Query: 65 LKELIQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAW--LFQVFQGLSYMHQNGF 122
L++ + LYL E +L Q A L PE + W L L+++H G
Sbjct: 122 LEQAWEEGGILYLQTELCGPSLQQHCEAWGASL---PEAQVWGYLRDTLLALAHLHSQGL 178
Query: 123 FHRDLKPENLLVS-QGIIKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQSELYSSKA 181
H D+KP N+ + +G K+ DFGL E+ + G Y APE+L S Y + A
Sbjct: 179 VHLDVKPANIFLGPRGRCKLGDFGLLVELGTAGAGEVQEGDPRYMAPELLQGS--YGTAA 236
Query: 182 DMWAMGAIMAEL 193
D++++G + E+
Sbjct: 237 DVFSLGLTILEV 248
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 94/194 (48%), Gaps = 14/194 (7%)
Query: 10 LGRGAFGRVFQAF---DEHTGEAVAIKELKQRYASWEDCLNLREVKCLRKLNHSNIVKLK 66
+G G FG V Q E+ AVAIK K + L+E +R+ +H +IVKL
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 67 ELIQNNNRLYLVFECMECNLYQLMAARDRKLFSE--PEIKAWLFQVFQGLSYMHQNGFFH 124
+I N ++++ E C L +L + + FS + + +Q+ L+Y+ F H
Sbjct: 78 GVI-TENPVWIIMEL--CTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKRFVH 134
Query: 125 RDLKPENLLVS-QGIIKIADFGLAREIKSGPPYTNYVGS---RWYRAPEILLQSELYSSK 180
RD+ N+LVS +K+ DFGL+R ++ Y G +W APE + ++S
Sbjct: 135 RDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWM-APES-INFRRFTSA 192
Query: 181 ADMWAMGAIMAELF 194
+D+W G M E+
Sbjct: 193 SDVWMFGVCMWEIL 206
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 102/203 (50%), Gaps = 18/203 (8%)
Query: 7 FKELGRGAFGRVFQA-FDEHTGE--AVAIKELKQRYASWEDCLN--LREVKCLRKLNHSN 61
++LG G+FG V + +D +G+ +VA+K LK S + ++ +REV + L+H N
Sbjct: 17 LEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRN 76
Query: 62 IVKLKELIQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQNG 121
+++L ++ + +V E + + F + + QV +G+ Y+
Sbjct: 77 LIRLYGVVLTPP-MKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKR 135
Query: 122 FFHRDLKPENLLV-SQGIIKIADFGLAREIKSGPPYTNYVGSRWYR-------APEILLQ 173
F HRDL NLL+ ++ ++KI DFGL R + P ++ + +R APE L+
Sbjct: 136 FIHRDLAARNLLLATRDLVKIGDFGLMRAL---PQNDDHYVMQEHRKVPFAWCAPES-LK 191
Query: 174 SELYSSKADMWAMGAIMAELFTF 196
+ +S +D W G + E+FT+
Sbjct: 192 TRTFSHASDTWMFGVTLWEMFTY 214
>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770
Length = 285
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 81/306 (26%), Positives = 123/306 (40%), Gaps = 64/306 (20%)
Query: 3 KYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLN-LREVKCLRKLN-HS 60
++ +++G G FG VF+ G AIK K+ A D N LREV L HS
Sbjct: 8 EFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHS 67
Query: 61 NIVKLKELIQNNNRLYLVFECMECNLYQLMAA-----RDRKLFSEPEIKAWLFQVFQGLS 115
++V+ ++ + + E CN L A R F E E+K L QV +GL
Sbjct: 68 HVVRYFSAWAEDDHMLIQNEY--CNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLR 125
Query: 116 YMHQNGFFHRDLKPENLLVSQGII--------------------KIADFGLAREIKSGPP 155
Y+H H D+KP N+ +S+ I KI D G I S P
Sbjct: 126 YIHSMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRISS--P 183
Query: 156 YTNYVGSRWYRAPEILLQSELYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGV 215
SR+ A E+L ++ + KAD++A+ + PL DQ ++I
Sbjct: 184 QVEEGDSRFL-ANEVLQENYTHLPKADIFALALTVVXAAGAEPL---PRNGDQWHEI--- 236
Query: 216 LGSPTMDSWADGLRQARAIKYQFPQLPRANLSALMPSASQDAISLFESLCSWDPSKRPTA 275
RQ R P++P+ SQ+ L + + DP +RP+A
Sbjct: 237 -------------RQGR-----LPRIPQV--------LSQEFTELLKVMIHPDPERRPSA 270
Query: 276 AEALQH 281
++H
Sbjct: 271 MALVKH 276
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 101/215 (46%), Gaps = 13/215 (6%)
Query: 8 KELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLNLR-EVKCLRKLNHSNIVKLK 66
+ +G G+FG V++ + G+ VA+K L + + + EV LRK H NI+
Sbjct: 18 QRIGSGSFGTVYKG--KWHGD-VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFM 74
Query: 67 ELIQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQNGFFHRD 126
+ C +LY + A + K F ++ Q +G+ Y+H HRD
Sbjct: 75 GYSTKPQLAIVTQWCEGSSLYHHLHASETK-FEMKKLIDIARQTARGMDYLHAKSIIHRD 133
Query: 127 LKPENLLVSQ-GIIKIADFGLAREIKS----GPPYTNYVGSRWYRAPEILL--QSELYSS 179
LK N+ + + +KI DFGLA +KS + GS + APE++ S YS
Sbjct: 134 LKSNNIFLHEDNTVKIGDFGLA-TVKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSF 192
Query: 180 KADMWAMGAIMAELFTFCPLFPGASEADQMYKICG 214
++D++A G ++ EL T + + DQ+ ++ G
Sbjct: 193 QSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVG 227
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 102/203 (50%), Gaps = 18/203 (8%)
Query: 7 FKELGRGAFGRVFQA-FDEHTGE--AVAIKELKQRYASWEDCLN--LREVKCLRKLNHSN 61
++LG G+FG V + +D +G+ +VA+K LK S + ++ +REV + L+H N
Sbjct: 17 LEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRN 76
Query: 62 IVKLKELIQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQNG 121
+++L ++ + +V E + + F + + QV +G+ Y+
Sbjct: 77 LIRLYGVVLTPP-MKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKR 135
Query: 122 FFHRDLKPENLLV-SQGIIKIADFGLAREIKSGPPYTNYVGSRWYR-------APEILLQ 173
F HRDL NLL+ ++ ++KI DFGL R + P ++ + +R APE L+
Sbjct: 136 FIHRDLAARNLLLATRDLVKIGDFGLMRAL---PQNDDHYVMQEHRKVPFAWCAPES-LK 191
Query: 174 SELYSSKADMWAMGAIMAELFTF 196
+ +S +D W G + E+FT+
Sbjct: 192 TRTFSHASDTWMFGVTLWEMFTY 214
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 88/192 (45%), Gaps = 10/192 (5%)
Query: 10 LGRGAFGRVFQAF---DEHTGEAVAIKELKQRYASWEDCLNLREVKCLRKLNHSNIVKLK 66
+G G FG V Q E+ AVAIK K + L+E +R+ +H +IVKL
Sbjct: 46 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 105
Query: 67 ELIQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQNGFFHRD 126
+I N ++ C L + R L + + +Q+ L+Y+ F HRD
Sbjct: 106 GVITENPVWIIMELCTLGELRSFLQVRKYSL-DLASLILYAYQLSTALAYLESKRFVHRD 164
Query: 127 LKPENLLVSQG-IIKIADFGLAREIKSGPPYTNYVGS---RWYRAPEILLQSELYSSKAD 182
+ N+LVS +K+ DFGL+R ++ Y G +W APE + ++S +D
Sbjct: 165 IAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWM-APES-INFRRFTSASD 222
Query: 183 MWAMGAIMAELF 194
+W G M E+
Sbjct: 223 VWMFGVCMWEIL 234
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 102/203 (50%), Gaps = 18/203 (8%)
Query: 7 FKELGRGAFGRVFQA-FDEHTGE--AVAIKELKQRYASWEDCLN--LREVKCLRKLNHSN 61
++LG G+FG V + +D +G+ +VA+K LK S + ++ +REV + L+H N
Sbjct: 13 LEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRN 72
Query: 62 IVKLKELIQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQNG 121
+++L ++ + +V E + + F + + QV +G+ Y+
Sbjct: 73 LIRLYGVVLTPP-MKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKR 131
Query: 122 FFHRDLKPENLLV-SQGIIKIADFGLAREIKSGPPYTNYVGSRWYR-------APEILLQ 173
F HRDL NLL+ ++ ++KI DFGL R + P ++ + +R APE L+
Sbjct: 132 FIHRDLAARNLLLATRDLVKIGDFGLMRAL---PQNDDHYVMQEHRKVPFAWCAPES-LK 187
Query: 174 SELYSSKADMWAMGAIMAELFTF 196
+ +S +D W G + E+FT+
Sbjct: 188 TRTFSHASDTWMFGVTLWEMFTY 210
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 88/192 (45%), Gaps = 10/192 (5%)
Query: 10 LGRGAFGRVFQAF---DEHTGEAVAIKELKQRYASWEDCLNLREVKCLRKLNHSNIVKLK 66
+G G FG V Q E+ AVAIK K + L+E +R+ +H +IVKL
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 67 ELIQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQNGFFHRD 126
+I N ++ C L + R L + + +Q+ L+Y+ F HRD
Sbjct: 78 GVITENPVWIIMELCTLGELRSFLQVRKYSL-DLASLILYAYQLSTALAYLESKRFVHRD 136
Query: 127 LKPENLLVSQG-IIKIADFGLAREIKSGPPYTNYVGS---RWYRAPEILLQSELYSSKAD 182
+ N+LVS +K+ DFGL+R ++ Y G +W APE + ++S +D
Sbjct: 137 IAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWM-APES-INFRRFTSASD 194
Query: 183 MWAMGAIMAELF 194
+W G M E+
Sbjct: 195 VWMFGVCMWEIL 206
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 102/203 (50%), Gaps = 18/203 (8%)
Query: 7 FKELGRGAFGRVFQA-FDEHTGE--AVAIKELKQRYASWEDCLN--LREVKCLRKLNHSN 61
++LG G+FG V + +D +G+ +VA+K LK S + ++ +REV + L+H N
Sbjct: 13 LEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRN 72
Query: 62 IVKLKELIQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQNG 121
+++L ++ + +V E + + F + + QV +G+ Y+
Sbjct: 73 LIRLYGVVLTPP-MKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKR 131
Query: 122 FFHRDLKPENLLV-SQGIIKIADFGLAREIKSGPPYTNYVGSRWYR-------APEILLQ 173
F HRDL NLL+ ++ ++KI DFGL R + P ++ + +R APE L+
Sbjct: 132 FIHRDLAARNLLLATRDLVKIGDFGLMRAL---PQNDDHYVMQEHRKVPFAWCAPES-LK 187
Query: 174 SELYSSKADMWAMGAIMAELFTF 196
+ +S +D W G + E+FT+
Sbjct: 188 TRTFSHASDTWMFGVTLWEMFTY 210
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 88/192 (45%), Gaps = 10/192 (5%)
Query: 10 LGRGAFGRVFQAF---DEHTGEAVAIKELKQRYASWEDCLNLREVKCLRKLNHSNIVKLK 66
+G G FG V Q E+ AVAIK K + L+E +R+ +H +IVKL
Sbjct: 23 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 82
Query: 67 ELIQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQNGFFHRD 126
+I N ++ C L + R L + + +Q+ L+Y+ F HRD
Sbjct: 83 GVITENPVWIIMELCTLGELRSFLQVRKYSL-DLASLILYAYQLSTALAYLESKRFVHRD 141
Query: 127 LKPENLLVSQG-IIKIADFGLAREIKSGPPYTNYVGS---RWYRAPEILLQSELYSSKAD 182
+ N+LVS +K+ DFGL+R ++ Y G +W APE + ++S +D
Sbjct: 142 IAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWM-APES-INFRRFTSASD 199
Query: 183 MWAMGAIMAELF 194
+W G M E+
Sbjct: 200 VWMFGVCMWEIL 211
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 108/231 (46%), Gaps = 27/231 (11%)
Query: 8 KELGRGAFGRVFQAFDEHTGE-----AVAIKELKQRYASWEDCLNLREVKCLRKLN-HSN 61
K LG GAFG+V +A G+ VA+K LK + E + E+K + L H N
Sbjct: 52 KTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHEN 111
Query: 62 IVKLKELIQNNNRLYLVFE-CMECNLYQLM--------------AARDRKLFSEPEIKAW 106
IV L + + ++ E C +L + + + S ++ +
Sbjct: 112 IVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSYNPSHNPEEQLSSRDLLHF 171
Query: 107 LFQVFQGLSYMHQNGFFHRDLKPENLLVSQG-IIKIADFGLAREIKSGPPYTNYVGSRW- 164
QV QG++++ HRD+ N+L++ G + KI DFGLAR+I + Y +R
Sbjct: 172 SSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLP 231
Query: 165 --YRAPEILLQSELYSSKADMWAMGAIMAELFTF-CPLFPGASEADQMYKI 212
+ APE + +Y+ ++D+W+ G ++ E+F+ +PG + YK+
Sbjct: 232 VKWMAPESIFDC-VYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKL 281
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 100/213 (46%), Gaps = 15/213 (7%)
Query: 10 LGRGAFGRVFQAF---DEHTGEAVAIKELKQRYASWEDCLNLREVKCLRKLNHSNIVKLK 66
+G G FG V Q E+ AVAIK K + L+E +R+ +H +IVKL
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 457
Query: 67 ELIQNNNRLYLVFECMECNLYQLMAARDRKLFSE--PEIKAWLFQVFQGLSYMHQNGFFH 124
+I N ++++ E C L +L + + FS + + +Q+ L+Y+ F H
Sbjct: 458 GVI-TENPVWIIMEL--CTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKRFVH 514
Query: 125 RDLKPENLLVSQG-IIKIADFGLAREIKSGPPYTNYVGS---RWYRAPEILLQSELYSSK 180
RD+ N+LVS +K+ DFGL+R ++ Y G +W APE + ++S
Sbjct: 515 RDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWM-APES-INFRRFTSA 572
Query: 181 ADMWAMGAIMAELFTF-CPLFPGASEADQMYKI 212
+D+W G M E+ F G D + +I
Sbjct: 573 SDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRI 605
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 88/192 (45%), Gaps = 10/192 (5%)
Query: 10 LGRGAFGRVFQAF---DEHTGEAVAIKELKQRYASWEDCLNLREVKCLRKLNHSNIVKLK 66
+G G FG V Q E+ AVAIK K + L+E +R+ +H +IVKL
Sbjct: 20 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 79
Query: 67 ELIQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQNGFFHRD 126
+I N ++ C L + R L + + +Q+ L+Y+ F HRD
Sbjct: 80 GVITENPVWIIMELCTLGELRSFLQVRKYSL-DLASLILYAYQLSTALAYLESKRFVHRD 138
Query: 127 LKPENLLVSQG-IIKIADFGLAREIKSGPPYTNYVGS---RWYRAPEILLQSELYSSKAD 182
+ N+LVS +K+ DFGL+R ++ Y G +W APE + ++S +D
Sbjct: 139 IAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWM-APES-INFRRFTSASD 196
Query: 183 MWAMGAIMAELF 194
+W G M E+
Sbjct: 197 VWMFGVCMWEIL 208
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 88/192 (45%), Gaps = 10/192 (5%)
Query: 10 LGRGAFGRVFQAF---DEHTGEAVAIKELKQRYASWEDCLNLREVKCLRKLNHSNIVKLK 66
+G G FG V Q E+ AVAIK K + L+E +R+ +H +IVKL
Sbjct: 21 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 80
Query: 67 ELIQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQNGFFHRD 126
+I N ++ C L + R L + + +Q+ L+Y+ F HRD
Sbjct: 81 GVITENPVWIIMELCTLGELRSFLQVRKYSL-DLASLILYAYQLSTALAYLESKRFVHRD 139
Query: 127 LKPENLLVSQG-IIKIADFGLAREIKSGPPYTNYVGS---RWYRAPEILLQSELYSSKAD 182
+ N+LVS +K+ DFGL+R ++ Y G +W APE + ++S +D
Sbjct: 140 IAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWM-APES-INFRRFTSASD 197
Query: 183 MWAMGAIMAELF 194
+W G M E+
Sbjct: 198 VWMFGVCMWEIL 209
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 95/209 (45%), Gaps = 21/209 (10%)
Query: 7 FKELGRGAFGRVFQAF-----DEHTGEAVAIKELKQRYASWEDCLNLREVKCLRKLNHSN 61
+ LG GAFG V++ ++ + VA+K L + + ++ L E + K NH N
Sbjct: 35 IRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQN 94
Query: 62 IVKLKELIQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWL------FQVFQGLS 115
IV+ + + +++ E M + R S+P A L + G
Sbjct: 95 IVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQ 154
Query: 116 YMHQNGFFHRDLKPEN-LLVSQG---IIKIADFGLAREIKSGPPYTN----YVGSRWYRA 167
Y+ +N F HRD+ N LL G + KI DFG+AR+I Y + +W
Sbjct: 155 YLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWM-P 213
Query: 168 PEILLQSELYSSKADMWAMGAIMAELFTF 196
PE ++ +++SK D W+ G ++ E+F+
Sbjct: 214 PEAFMEG-IFTSKTDTWSFGVLLWEIFSL 241
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 95/209 (45%), Gaps = 21/209 (10%)
Query: 7 FKELGRGAFGRVFQAF-----DEHTGEAVAIKELKQRYASWEDCLNLREVKCLRKLNHSN 61
+ LG GAFG V++ ++ + VA+K L + + ++ L E + K NH N
Sbjct: 27 IRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQN 86
Query: 62 IVKLKELIQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWL------FQVFQGLS 115
IV+ + + +++ E M + R S+P A L + G
Sbjct: 87 IVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQ 146
Query: 116 YMHQNGFFHRDLKPEN-LLVSQG---IIKIADFGLAREIKSGPPYTN----YVGSRWYRA 167
Y+ +N F HRD+ N LL G + KI DFG+AR+I Y + +W
Sbjct: 147 YLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWM-P 205
Query: 168 PEILLQSELYSSKADMWAMGAIMAELFTF 196
PE ++ +++SK D W+ G ++ E+F+
Sbjct: 206 PEAFMEG-IFTSKTDTWSFGVLLWEIFSL 233
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 95/209 (45%), Gaps = 21/209 (10%)
Query: 7 FKELGRGAFGRVFQAF-----DEHTGEAVAIKELKQRYASWEDCLNLREVKCLRKLNHSN 61
+ LG GAFG V++ ++ + VA+K L + + ++ L E + K NH N
Sbjct: 36 IRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQN 95
Query: 62 IVKLKELIQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWL------FQVFQGLS 115
IV+ + + +++ E M + R S+P A L + G
Sbjct: 96 IVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQ 155
Query: 116 YMHQNGFFHRDLKPEN-LLVSQG---IIKIADFGLAREIKSGPPYTN----YVGSRWYRA 167
Y+ +N F HRD+ N LL G + KI DFG+AR+I Y + +W
Sbjct: 156 YLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWM-P 214
Query: 168 PEILLQSELYSSKADMWAMGAIMAELFTF 196
PE ++ +++SK D W+ G ++ E+F+
Sbjct: 215 PEAFMEG-IFTSKTDTWSFGVLLWEIFSL 242
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 88/192 (45%), Gaps = 10/192 (5%)
Query: 10 LGRGAFGRVFQAF---DEHTGEAVAIKELKQRYASWEDCLNLREVKCLRKLNHSNIVKLK 66
+G G FG V Q E+ AVAIK K + L+E +R+ +H +IVKL
Sbjct: 18 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 67 ELIQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQNGFFHRD 126
+I N ++ C L + R L + + +Q+ L+Y+ F HRD
Sbjct: 78 GVITENPVWIIMELCTLGELRSFLQVRKYSL-DLASLILYAYQLSTALAYLESKRFVHRD 136
Query: 127 LKPENLLVSQG-IIKIADFGLAREIKSGPPYTNYVGS---RWYRAPEILLQSELYSSKAD 182
+ N+LVS +K+ DFGL+R ++ Y G +W APE + ++S +D
Sbjct: 137 IAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWM-APES-INFRRFTSASD 194
Query: 183 MWAMGAIMAELF 194
+W G M E+
Sbjct: 195 VWMFGVCMWEIL 206
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 95/209 (45%), Gaps = 21/209 (10%)
Query: 7 FKELGRGAFGRVFQAF-----DEHTGEAVAIKELKQRYASWEDCLNLREVKCLRKLNHSN 61
+ LG GAFG V++ ++ + VA+K L + + ++ L E + K NH N
Sbjct: 52 IRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQN 111
Query: 62 IVKLKELIQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWL------FQVFQGLS 115
IV+ + + +++ E M + R S+P A L + G
Sbjct: 112 IVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQ 171
Query: 116 YMHQNGFFHRDLKPEN-LLVSQG---IIKIADFGLAREIKSGPPYTN----YVGSRWYRA 167
Y+ +N F HRD+ N LL G + KI DFG+AR+I Y + +W
Sbjct: 172 YLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWM-P 230
Query: 168 PEILLQSELYSSKADMWAMGAIMAELFTF 196
PE ++ +++SK D W+ G ++ E+F+
Sbjct: 231 PEAFMEG-IFTSKTDTWSFGVLLWEIFSL 258
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 100/218 (45%), Gaps = 39/218 (17%)
Query: 7 FKELGRGAFGRVFQAF-----DEHTGEAVAIKELKQRYASWEDCLNLREVKCLRKLNHSN 61
+ LG GAFG V++ ++ + VA+K L + + ++ L E + K NH N
Sbjct: 35 IRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQN 94
Query: 62 IVKLKEL-IQNNNRLYLVFECMECNLYQLMAARDRKLF--------SEPEIKAWL----- 107
IV+ + +Q+ R L+ +LMA D K F S+P A L
Sbjct: 95 IVRCIGVSLQSLPRFILM---------ELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHV 145
Query: 108 -FQVFQGLSYMHQNGFFHRDLKPEN-LLVSQG---IIKIADFGLAREIKSGPPYTN---- 158
+ G Y+ +N F HRD+ N LL G + KI DFG+AR+I Y
Sbjct: 146 ARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCA 205
Query: 159 YVGSRWYRAPEILLQSELYSSKADMWAMGAIMAELFTF 196
+ +W PE ++ +++SK D W+ G ++ E+F+
Sbjct: 206 MLPVKWM-PPEAFMEG-IFTSKTDTWSFGVLLWEIFSL 241
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 95/209 (45%), Gaps = 21/209 (10%)
Query: 7 FKELGRGAFGRVFQAF-----DEHTGEAVAIKELKQRYASWEDCLNLREVKCLRKLNHSN 61
+ LG GAFG V++ ++ + VA+K L + + ++ L E + K NH N
Sbjct: 42 IRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQN 101
Query: 62 IVKLKELIQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWL------FQVFQGLS 115
IV+ + + +++ E M + R S+P A L + G
Sbjct: 102 IVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQ 161
Query: 116 YMHQNGFFHRDLKPEN-LLVSQG---IIKIADFGLAREIKSGPPYTN----YVGSRWYRA 167
Y+ +N F HRD+ N LL G + KI DFG+AR+I Y + +W
Sbjct: 162 YLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWM-P 220
Query: 168 PEILLQSELYSSKADMWAMGAIMAELFTF 196
PE ++ +++SK D W+ G ++ E+F+
Sbjct: 221 PEAFMEG-IFTSKTDTWSFGVLLWEIFSL 248
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 100/213 (46%), Gaps = 15/213 (7%)
Query: 10 LGRGAFGRVFQAF---DEHTGEAVAIKELKQRYASWEDCLNLREVKCLRKLNHSNIVKLK 66
+G G FG V Q E+ AVAIK K + L+E +R+ +H +IVKL
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 457
Query: 67 ELIQNNNRLYLVFECMECNLYQLMAARDRKLFSE--PEIKAWLFQVFQGLSYMHQNGFFH 124
+I N ++++ E C L +L + + FS + + +Q+ L+Y+ F H
Sbjct: 458 GVI-TENPVWIIMEL--CTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKRFVH 514
Query: 125 RDLKPENLLVS-QGIIKIADFGLAREIKSGPPYTNYVGS---RWYRAPEILLQSELYSSK 180
RD+ N+LVS +K+ DFGL+R ++ Y G +W APE + ++S
Sbjct: 515 RDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWM-APES-INFRRFTSA 572
Query: 181 ADMWAMGAIMAELFTF-CPLFPGASEADQMYKI 212
+D+W G M E+ F G D + +I
Sbjct: 573 SDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRI 605
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 88/192 (45%), Gaps = 10/192 (5%)
Query: 10 LGRGAFGRVFQAF---DEHTGEAVAIKELKQRYASWEDCLNLREVKCLRKLNHSNIVKLK 66
+G G FG V Q E+ AVAIK K + L+E +R+ +H +IVKL
Sbjct: 15 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 74
Query: 67 ELIQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQNGFFHRD 126
+I N ++ C L + R L + + +Q+ L+Y+ F HRD
Sbjct: 75 GVITENPVWIIMELCTLGELRSFLQVRKYSL-DLASLILYAYQLSTALAYLESKRFVHRD 133
Query: 127 LKPENLLVSQG-IIKIADFGLAREIKSGPPYTNYVGS---RWYRAPEILLQSELYSSKAD 182
+ N+LVS +K+ DFGL+R ++ Y G +W APE + ++S +D
Sbjct: 134 IAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWM-APES-INFRRFTSASD 191
Query: 183 MWAMGAIMAELF 194
+W G M E+
Sbjct: 192 VWMFGVCMWEIL 203
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 100/208 (48%), Gaps = 25/208 (12%)
Query: 6 GFKELGRGAFGRVFQAFDEHTGEAV---------AIKELKQRYASWEDCLNLREVKCLRK 56
G + G G FG V++ + +T AV +ELKQ++ +E+K K
Sbjct: 26 GGNKXGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELKQQFD--------QEIKVXAK 77
Query: 57 LNHSNIVKLKELIQNNNRLYLVFECM-ECNLYQLMAARDRKLFSEPEIKAWLFQ-VFQGL 114
H N+V+L + + L LV+ +L ++ D + + Q G+
Sbjct: 78 CQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRLSCLDGTPPLSWHXRCKIAQGAANGI 137
Query: 115 SYMHQNGFFHRDLKPENLLVSQGII-KIADFGLAR---EIKSGPPYTNYVGSRWYRAPEI 170
+++H+N HRD+K N+L+ + KI+DFGLAR + + VG+ Y APE
Sbjct: 138 NFLHENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVXXSRIVGTTAYXAPEA 197
Query: 171 LLQSELYSSKADMWAMGAIMAELFTFCP 198
L+ E+ + K+D+++ G ++ E+ T P
Sbjct: 198 -LRGEI-TPKSDIYSFGVVLLEIITGLP 223
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 95/209 (45%), Gaps = 21/209 (10%)
Query: 7 FKELGRGAFGRVFQAF-----DEHTGEAVAIKELKQRYASWEDCLNLREVKCLRKLNHSN 61
+ LG GAFG V++ ++ + VA+K L + + ++ L E + K NH N
Sbjct: 62 IRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQN 121
Query: 62 IVKLKELIQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWL------FQVFQGLS 115
IV+ + + +++ E M + R S+P A L + G
Sbjct: 122 IVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQ 181
Query: 116 YMHQNGFFHRDLKPEN-LLVSQG---IIKIADFGLAREIKSGPPYTN----YVGSRWYRA 167
Y+ +N F HRD+ N LL G + KI DFG+AR+I Y + +W
Sbjct: 182 YLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWM-P 240
Query: 168 PEILLQSELYSSKADMWAMGAIMAELFTF 196
PE ++ +++SK D W+ G ++ E+F+
Sbjct: 241 PEAFMEG-IFTSKTDTWSFGVLLWEIFSL 268
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 100/218 (45%), Gaps = 39/218 (17%)
Query: 7 FKELGRGAFGRVFQAF-----DEHTGEAVAIKELKQRYASWEDCLNLREVKCLRKLNHSN 61
+ LG GAFG V++ ++ + VA+K L + + ++ L E + K NH N
Sbjct: 50 IRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQN 109
Query: 62 IVKLKEL-IQNNNRLYLVFECMECNLYQLMAARDRKLF--------SEPEIKAWL----- 107
IV+ + +Q+ R L+ +LMA D K F S+P A L
Sbjct: 110 IVRCIGVSLQSLPRFILM---------ELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHV 160
Query: 108 -FQVFQGLSYMHQNGFFHRDLKPEN-LLVSQG---IIKIADFGLAREIKSGPPYTN---- 158
+ G Y+ +N F HRD+ N LL G + KI DFG+AR+I Y
Sbjct: 161 ARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCA 220
Query: 159 YVGSRWYRAPEILLQSELYSSKADMWAMGAIMAELFTF 196
+ +W PE ++ +++SK D W+ G ++ E+F+
Sbjct: 221 MLPVKWM-PPEAFMEG-IFTSKTDTWSFGVLLWEIFSL 256
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 95/209 (45%), Gaps = 21/209 (10%)
Query: 7 FKELGRGAFGRVFQAF-----DEHTGEAVAIKELKQRYASWEDCLNLREVKCLRKLNHSN 61
+ LG GAFG V++ ++ + VA+K L + + ++ L E + K NH N
Sbjct: 53 IRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQN 112
Query: 62 IVKLKELIQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWL------FQVFQGLS 115
IV+ + + +++ E M + R S+P A L + G
Sbjct: 113 IVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQ 172
Query: 116 YMHQNGFFHRDLKPEN-LLVSQG---IIKIADFGLAREIKSGPPYTN----YVGSRWYRA 167
Y+ +N F HRD+ N LL G + KI DFG+AR+I Y + +W
Sbjct: 173 YLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWM-P 231
Query: 168 PEILLQSELYSSKADMWAMGAIMAELFTF 196
PE ++ +++SK D W+ G ++ E+F+
Sbjct: 232 PEAFMEG-IFTSKTDTWSFGVLLWEIFSL 259
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 95/209 (45%), Gaps = 21/209 (10%)
Query: 7 FKELGRGAFGRVFQAF-----DEHTGEAVAIKELKQRYASWEDCLNLREVKCLRKLNHSN 61
+ LG GAFG V++ ++ + VA+K L + + ++ L E + K NH N
Sbjct: 76 IRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQN 135
Query: 62 IVKLKELIQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWL------FQVFQGLS 115
IV+ + + +++ E M + R S+P A L + G
Sbjct: 136 IVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQ 195
Query: 116 YMHQNGFFHRDLKPEN-LLVSQG---IIKIADFGLAREIKSGPPYTN----YVGSRWYRA 167
Y+ +N F HRD+ N LL G + KI DFG+AR+I Y + +W
Sbjct: 196 YLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWM-P 254
Query: 168 PEILLQSELYSSKADMWAMGAIMAELFTF 196
PE ++ +++SK D W+ G ++ E+F+
Sbjct: 255 PEAFMEG-IFTSKTDTWSFGVLLWEIFSL 282
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 71/248 (28%), Positives = 114/248 (45%), Gaps = 24/248 (9%)
Query: 2 DKYSGFKELGRGAFGRVFQAFDEHTGEAVAIK-----ELKQRYAS---WEDCLNLREVKC 53
+ Y K +GRGAFG V + T + A+K E+ +R S WE+ R++
Sbjct: 69 EDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEE----RDIMA 124
Query: 54 LRKLNHSNIVKLKELIQNNNRLYLVFECMEC-NLYQLMAARDRKLFSEPEIKAWLFQVFQ 112
N +V+L Q++ LY+V E M +L LM+ D E + + +V
Sbjct: 125 F--ANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYD---VPEKWARFYTAEVVL 179
Query: 113 GLSYMHQNGFFHRDLKPENLLVSQ-GIIKIADFGLAREI-KSGPPYTNY-VGSRWYRAPE 169
L +H GF HRD+KP+N+L+ + G +K+ADFG ++ K G + VG+ Y +PE
Sbjct: 180 ALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPE 239
Query: 170 ILLQ---SELYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWAD 226
+L Y + D W++G + E+ F S KI S T D
Sbjct: 240 VLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFPDDND 299
Query: 227 GLRQARAI 234
++A+ +
Sbjct: 300 ISKEAKNL 307
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 98/204 (48%), Gaps = 23/204 (11%)
Query: 8 KELGRGAFGRVFQAFDEHTGEA-----VAIKELKQRYASWEDCLNLREVKCLRKLNHSNI 62
+ +G+G FG V+ E+ +A AIK L + + LRE +R LNH N+
Sbjct: 27 RVIGKGHFGVVYHG--EYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNV 84
Query: 63 VKLKELIQNNNRLYLVFECMEC--NLYQLMAARDRKLFSEPEIKAWL---FQVFQGLSYM 117
+ L ++ L V C +L Q + + R P +K + QV +G+ Y+
Sbjct: 85 LALIGIMLPPEGLPHVLLPYMCHGDLLQFIRSPQRN----PTVKDLISFGLQVARGMEYL 140
Query: 118 HQNGFFHRDLKPENLLVSQGI-IKIADFGLAREIKSGPPYTNYVGSRWYRAPEIL----- 171
+ F HRDL N ++ + +K+ADFGLAR+I Y + R R P
Sbjct: 141 AEQKFVHRDLAARNCMLDESFTVKVADFGLARDILDR-EYYSVQQHRHARLPVKWTALES 199
Query: 172 LQSELYSSKADMWAMGAIMAELFT 195
LQ+ +++K+D+W+ G ++ EL T
Sbjct: 200 LQTYRFTTKSDVWSFGVLLWELLT 223
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 103/215 (47%), Gaps = 21/215 (9%)
Query: 2 DKYSGFKELGRGAFGRVFQ--AFDEHTGEA---VAIKELKQRYASWEDCLNLREVKCLRK 56
+K + +ELG+G+FG V++ A D GEA VA+K + + + E L E ++
Sbjct: 17 EKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKG 76
Query: 57 LNHSNIVKLKELIQNNNRLYLVFECM-ECNLYQLMAARDRKLFSEP--------EIKAWL 107
++V+L ++ +V E M +L + + + + P E+
Sbjct: 77 FTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMA 136
Query: 108 FQVFQGLSYMHQNGFFHRDLKPENLLVSQGI-IKIADFGLAREIKSGPPY----TNYVGS 162
++ G++Y++ F HRDL N +V+ +KI DFG+ R+I Y +
Sbjct: 137 AEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETAYYRKGGKGLLPV 196
Query: 163 RWYRAPEILLQSELYSSKADMWAMGAIMAELFTFC 197
RW APE L+ ++++ +DMW+ G ++ E+ +
Sbjct: 197 RWM-APES-LKDGVFTTSSDMWSFGVVLWEITSLA 229
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 103/215 (47%), Gaps = 21/215 (9%)
Query: 2 DKYSGFKELGRGAFGRVFQ--AFDEHTGEA---VAIKELKQRYASWEDCLNLREVKCLRK 56
+K + +ELG+G+FG V++ A D GEA VA+K + + + E L E ++
Sbjct: 16 EKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKG 75
Query: 57 LNHSNIVKLKELIQNNNRLYLVFECM-ECNLYQLMAARDRKLFSEP--------EIKAWL 107
++V+L ++ +V E M +L + + + + P E+
Sbjct: 76 FTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMA 135
Query: 108 FQVFQGLSYMHQNGFFHRDLKPENLLVSQGI-IKIADFGLAREIKSGPPY----TNYVGS 162
++ G++Y++ F HRDL N +V+ +KI DFG+ R+I Y +
Sbjct: 136 AEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPV 195
Query: 163 RWYRAPEILLQSELYSSKADMWAMGAIMAELFTFC 197
RW APE L+ ++++ +DMW+ G ++ E+ +
Sbjct: 196 RWM-APES-LKDGVFTTSSDMWSFGVVLWEITSLA 228
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/238 (26%), Positives = 109/238 (45%), Gaps = 34/238 (14%)
Query: 8 KELGRGAFGRVFQAFDEHTGE-----AVAIKELKQRYASWEDCLNLREVKCLRKLN-HSN 61
K LG GAFG+V +A G+ VA+K LK + E + E+K + L H N
Sbjct: 37 KTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHEN 96
Query: 62 IVKLKELIQNNNRLYLVFE-CMECNLYQLMAARDRKLFS-------EPE----------- 102
IV L + + ++ E C +L + + + +PE
Sbjct: 97 IVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQDPEGLDKEDGRPLE 156
Query: 103 ---IKAWLFQVFQGLSYMHQNGFFHRDLKPENLLVSQG-IIKIADFGLAREIKSGPPYTN 158
+ + QV QG++++ HRD+ N+L++ G + KI DFGLAR+I + Y
Sbjct: 157 LRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIV 216
Query: 159 YVGSRW---YRAPEILLQSELYSSKADMWAMGAIMAELFTF-CPLFPGASEADQMYKI 212
+R + APE + +Y+ ++D+W+ G ++ E+F+ +PG + YK+
Sbjct: 217 KGNARLPVKWMAPESIFDC-VYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKL 273
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 71/248 (28%), Positives = 114/248 (45%), Gaps = 24/248 (9%)
Query: 2 DKYSGFKELGRGAFGRVFQAFDEHTGEAVAIK-----ELKQRYAS---WEDCLNLREVKC 53
+ Y K +GRGAFG V + T + A+K E+ +R S WE+ R++
Sbjct: 74 EDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEE----RDIMA 129
Query: 54 LRKLNHSNIVKLKELIQNNNRLYLVFECMEC-NLYQLMAARDRKLFSEPEIKAWLFQVFQ 112
N +V+L Q++ LY+V E M +L LM+ D E + + +V
Sbjct: 130 F--ANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYD---VPEKWARFYTAEVVL 184
Query: 113 GLSYMHQNGFFHRDLKPENLLVSQ-GIIKIADFGLAREI-KSGPPYTNY-VGSRWYRAPE 169
L +H GF HRD+KP+N+L+ + G +K+ADFG ++ K G + VG+ Y +PE
Sbjct: 185 ALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPE 244
Query: 170 ILLQ---SELYSSKADMWAMGAIMAELFTFCPLFPGASEADQMYKICGVLGSPTMDSWAD 226
+L Y + D W++G + E+ F S KI S T D
Sbjct: 245 VLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFPDDND 304
Query: 227 GLRQARAI 234
++A+ +
Sbjct: 305 ISKEAKNL 312
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 102/209 (48%), Gaps = 24/209 (11%)
Query: 2 DKYSGFKELGRGAFGRVFQAFDEHTGEAVAIK-----ELKQRYAS---WEDCLNLREVKC 53
+ Y K +GRGAFG V + T + A+K E+ +R S WE+ R++
Sbjct: 74 EDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEE----RDIMA 129
Query: 54 LRKLNHSNIVKLKELIQNNNRLYLVFECMEC-NLYQLMAARDRKLFSEPEIKAWLFQVFQ 112
N +V+L Q++ LY+V E M +L LM+ D E + + +V
Sbjct: 130 F--ANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYD---VPEKWARFYTAEVVL 184
Query: 113 GLSYMHQNGFFHRDLKPENLLVSQ-GIIKIADFGLAREI-KSGPPYTNY-VGSRWYRAPE 169
L +H GF HRD+KP+N+L+ + G +K+ADFG ++ K G + VG+ Y +PE
Sbjct: 185 ALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPE 244
Query: 170 ILLQ---SELYSSKADMWAMGAIMAELFT 195
+L Y + D W++G + E+
Sbjct: 245 VLKSQGGDGYYGRECDWWSVGVFLYEMLV 273
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 105/208 (50%), Gaps = 21/208 (10%)
Query: 2 DKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLNLREVKCLRK----- 56
+ + K +GRGAFG V ++ + A+K L + WE L E C R+
Sbjct: 74 EDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNK----WE-MLKRAETACFREERDVL 128
Query: 57 LNHSN--IVKLKELIQNNNRLYLVFEC-MECNLYQLMAARDRKLFSEPEIKAWLFQVFQG 113
+N + I L Q++N LYLV + + +L L++ + +L E + +L ++
Sbjct: 129 VNGDSKWITTLHYAFQDDNNLYLVMDYYVGGDLLTLLSKFEDRL-PEEMARFYLAEMVIA 187
Query: 114 LSYMHQNGFFHRDLKPENLLVS-QGIIKIADFG-LAREIKSGPPYTNY-VGSRWYRAPEI 170
+ +HQ + HRD+KP+N+L+ G I++ADFG + ++ G ++ VG+ Y +PEI
Sbjct: 188 IDSVHQLHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQSSVAVGTPDYISPEI 247
Query: 171 LLQSE----LYSSKADMWAMGAIMAELF 194
L E Y + D W++G M E+
Sbjct: 248 LQAMEGGKGRYGPECDWWSLGVCMYEML 275
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 64/108 (59%), Gaps = 9/108 (8%)
Query: 97 LFSEP----EIKAWLFQVFQGLSYMHQNGFFHRDLKPENLLVSQG-IIKIADFGLAREIK 151
+ EP ++ ++ FQV +G+ ++ HRDL N+L+S+ ++KI DFGLAR+I
Sbjct: 191 FYKEPITMEDLISYSFQVARGMEFLSSRKCIHRDLAARNILLSENNVVKICDFGLARDIY 250
Query: 152 SGPPYTNYVGSRW---YRAPEILLQSELYSSKADMWAMGAIMAELFTF 196
P Y +R + APE + ++YS+K+D+W+ G ++ E+F+
Sbjct: 251 KNPDYVRKGDTRLPLKWMAPESIFD-KIYSTKSDVWSYGVLLWEIFSL 297
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 103/215 (47%), Gaps = 21/215 (9%)
Query: 2 DKYSGFKELGRGAFGRVFQ--AFDEHTGEA---VAIKELKQRYASWEDCLNLREVKCLRK 56
+K + +ELG+G+FG V++ A D GEA VA+K + + + E L E ++
Sbjct: 17 EKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKG 76
Query: 57 LNHSNIVKLKELIQNNNRLYLVFECM-ECNLYQLMAARDRKLFSEP--------EIKAWL 107
++V+L ++ +V E M +L + + + + P E+
Sbjct: 77 FTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMA 136
Query: 108 FQVFQGLSYMHQNGFFHRDLKPENLLVSQGI-IKIADFGLAREIKSGPPY----TNYVGS 162
++ G++Y++ F HRDL N +V+ +KI DFG+ R+I Y +
Sbjct: 137 AEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPV 196
Query: 163 RWYRAPEILLQSELYSSKADMWAMGAIMAELFTFC 197
RW APE L+ ++++ +DMW+ G ++ E+ +
Sbjct: 197 RWM-APES-LKDGVFTTSSDMWSFGVVLWEITSLA 229
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 104/215 (48%), Gaps = 21/215 (9%)
Query: 2 DKYSGFKELGRGAFGRVFQAF-----DEHTGEAVAIKELKQRYASWEDCLNLREVKCLRK 56
+K + +ELG+G+FG V++ + VAIK + + + E L E +++
Sbjct: 25 EKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKE 84
Query: 57 LNHSNIVKLKELIQNNNRLYLVFECM-----ECNLYQLMAAR-DRKLFSEPEIKAWL--- 107
N ++V+L ++ ++ E M + L L A + + + P + +
Sbjct: 85 FNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMA 144
Query: 108 FQVFQGLSYMHQNGFFHRDLKPENLLVSQGI-IKIADFGLAREIKSGPPY----TNYVGS 162
++ G++Y++ N F HRDL N +V++ +KI DFG+ R+I Y +
Sbjct: 145 GEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPV 204
Query: 163 RWYRAPEILLQSELYSSKADMWAMGAIMAELFTFC 197
RW +PE L+ ++++ +D+W+ G ++ E+ T
Sbjct: 205 RWM-SPES-LKDGVFTTYSDVWSFGVVLWEIATLA 237
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 102/199 (51%), Gaps = 15/199 (7%)
Query: 8 KELGRGAFGRV----FQAFDEHTGEAVAIKELKQRYASWEDCLNLREVKCLRKLNHSNIV 63
KELG G FG V +Q AV I + + + +D L L E +++L++ IV
Sbjct: 375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDEL-LAEANVMQQLDNPYIV 433
Query: 64 KLKELIQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQNGFF 123
++ + + + + LV E E ++R + + I + QV G+ Y+ ++ F
Sbjct: 434 RMIGICEAESWM-LVMEMAELGPLNKYLQQNRHV-KDKNIIELVHQVSMGMKYLEESNFV 491
Query: 124 HRDLKPEN-LLVSQGIIKIADFGLAREIKSGPPYTNYVGS-----RWYRAPEILLQSELY 177
HRDL N LLV+Q KI+DFGL++ +++ Y +WY APE + + +
Sbjct: 492 HRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWY-APECINYYK-F 549
Query: 178 SSKADMWAMGAIMAELFTF 196
SSK+D+W+ G +M E F++
Sbjct: 550 SSKSDVWSFGVLMWEAFSY 568
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 102/199 (51%), Gaps = 15/199 (7%)
Query: 8 KELGRGAFGRV----FQAFDEHTGEAVAIKELKQRYASWEDCLNLREVKCLRKLNHSNIV 63
KELG G FG V +Q AV I + + + +D L L E +++L++ IV
Sbjct: 376 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDEL-LAEANVMQQLDNPYIV 434
Query: 64 KLKELIQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQNGFF 123
++ + + + + LV E E ++R + + I + QV G+ Y+ ++ F
Sbjct: 435 RMIGICEAESWM-LVMEMAELGPLNKYLQQNRHV-KDKNIIELVHQVSMGMKYLEESNFV 492
Query: 124 HRDLKPEN-LLVSQGIIKIADFGLAREIKSGPPYTNYVGS-----RWYRAPEILLQSELY 177
HRDL N LLV+Q KI+DFGL++ +++ Y +WY APE + + +
Sbjct: 493 HRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWY-APECINYYK-F 550
Query: 178 SSKADMWAMGAIMAELFTF 196
SSK+D+W+ G +M E F++
Sbjct: 551 SSKSDVWSFGVLMWEAFSY 569
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 104/215 (48%), Gaps = 21/215 (9%)
Query: 2 DKYSGFKELGRGAFGRVFQAF-----DEHTGEAVAIKELKQRYASWEDCLNLREVKCLRK 56
+K + +ELG+G+FG V++ + VAIK + + + E L E +++
Sbjct: 15 EKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKE 74
Query: 57 LNHSNIVKLKELIQNNNRLYLVFECM-----ECNLYQLM-AARDRKLFSEPEIKAWL--- 107
N ++V+L ++ ++ E M + L L A + + + P + +
Sbjct: 75 FNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMA 134
Query: 108 FQVFQGLSYMHQNGFFHRDLKPENLLVSQGI-IKIADFGLAREIKSGPPY----TNYVGS 162
++ G++Y++ N F HRDL N +V++ +KI DFG+ R+I Y +
Sbjct: 135 GEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPV 194
Query: 163 RWYRAPEILLQSELYSSKADMWAMGAIMAELFTFC 197
RW +PE L+ ++++ +D+W+ G ++ E+ T
Sbjct: 195 RWM-SPES-LKDGVFTTYSDVWSFGVVLWEIATLA 227
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 100/214 (46%), Gaps = 11/214 (5%)
Query: 8 KELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLNLR-EVKCLRKLNHSNIVKLK 66
+ +G G+FG V++ + G+ VA+K L + + + EV LRK H NI+
Sbjct: 42 QRIGSGSFGTVYKG--KWHGD-VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFM 98
Query: 67 ELIQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQNGFFHRD 126
+ C +LY + + K F ++ Q QG+ Y+H HRD
Sbjct: 99 GYSTKPQLAIVTQWCEGSSLYHHLHIIETK-FEMIKLIDIARQTAQGMDYLHAKSIIHRD 157
Query: 127 LKPENLLVSQGI-IKIADFGLAREIK--SGP-PYTNYVGSRWYRAPEILLQSEL--YSSK 180
LK N+ + + + +KI DFGLA E SG + GS + APE++ + YS +
Sbjct: 158 LKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQ 217
Query: 181 ADMWAMGAIMAELFTFCPLFPGASEADQMYKICG 214
+D++A G ++ EL T + + DQ+ + G
Sbjct: 218 SDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVG 251
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 100/214 (46%), Gaps = 11/214 (5%)
Query: 8 KELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLNLR-EVKCLRKLNHSNIVKLK 66
+ +G G+FG V++ + G+ VA+K L + + + EV LRK H NI+
Sbjct: 34 QRIGSGSFGTVYKG--KWHGD-VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFM 90
Query: 67 ELIQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQNGFFHRD 126
+ C +LY + + K F ++ Q QG+ Y+H HRD
Sbjct: 91 GYSTKPQLAIVTQWCEGSSLYHHLHIIETK-FEMIKLIDIARQTAQGMDYLHAKSIIHRD 149
Query: 127 LKPENLLVSQGI-IKIADFGLAREIK--SGP-PYTNYVGSRWYRAPEILLQSEL--YSSK 180
LK N+ + + + +KI DFGLA E SG + GS + APE++ + YS +
Sbjct: 150 LKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQ 209
Query: 181 ADMWAMGAIMAELFTFCPLFPGASEADQMYKICG 214
+D++A G ++ EL T + + DQ+ + G
Sbjct: 210 SDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVG 243
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 93/194 (47%), Gaps = 14/194 (7%)
Query: 10 LGRGAFGRVFQAF---DEHTGEAVAIKELKQRYASWEDCLNLREVKCLRKLNHSNIVKLK 66
+G G FG V Q E+ AVAIK K + L+E +R+ +H +IVKL
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 67 ELIQNNNRLYLVFECMECNLYQLMAARDRKLFSE--PEIKAWLFQVFQGLSYMHQNGFFH 124
+I N ++++ E C L +L + + FS + + +Q+ L+Y+ F H
Sbjct: 78 GVI-TENPVWIIMEL--CTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKRFVH 134
Query: 125 RDLKPENLLVSQG-IIKIADFGLAREIKSGPPYTNYVGS---RWYRAPEILLQSELYSSK 180
RD+ N+LVS +K+ DFGL+R ++ G +W APE + ++S
Sbjct: 135 RDIAARNVLVSSNDCVKLGDFGLSRYMEDSTXXKASKGKLPIKWM-APES-INFRRFTSA 192
Query: 181 ADMWAMGAIMAELF 194
+D+W G M E+
Sbjct: 193 SDVWMFGVCMWEIL 206
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 100/214 (46%), Gaps = 11/214 (5%)
Query: 8 KELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLNLR-EVKCLRKLNHSNIVKLK 66
+ +G G+FG V++ + G+ VA+K L + + + EV LRK H NI+
Sbjct: 14 QRIGSGSFGTVYKG--KWHGD-VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFM 70
Query: 67 ELIQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQNGFFHRD 126
+ C +LY + + K F ++ Q QG+ Y+H HRD
Sbjct: 71 GYSTKPQLAIVTQWCEGSSLYHHLHIIETK-FEMIKLIDIARQTAQGMDYLHAKSIIHRD 129
Query: 127 LKPENLLVSQGI-IKIADFGLAREIK--SGP-PYTNYVGSRWYRAPEILLQSEL--YSSK 180
LK N+ + + + +KI DFGLA E SG + GS + APE++ + YS +
Sbjct: 130 LKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQ 189
Query: 181 ADMWAMGAIMAELFTFCPLFPGASEADQMYKICG 214
+D++A G ++ EL T + + DQ+ + G
Sbjct: 190 SDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVG 223
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 101/215 (46%), Gaps = 21/215 (9%)
Query: 2 DKYSGFKELGRGAFGRVFQAF-----DEHTGEAVAIKELKQRYASWEDCLNLREVKCLRK 56
+K + +ELG+G+FG V++ + VAIK + + + E L E +++
Sbjct: 18 EKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKE 77
Query: 57 LNHSNIVKLKELIQNNNRLYLVFECM-----ECNLYQLMAARDRKLFSEPEIKAWLFQ-- 109
N ++V+L ++ ++ E M + L L + P + + Q
Sbjct: 78 FNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMA 137
Query: 110 --VFQGLSYMHQNGFFHRDLKPENLLVSQGI-IKIADFGLAREIKSGPPY----TNYVGS 162
+ G++Y++ N F HRDL N +V++ +KI DFG+ R+I Y +
Sbjct: 138 GEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPV 197
Query: 163 RWYRAPEILLQSELYSSKADMWAMGAIMAELFTFC 197
RW +PE L+ ++++ +D+W+ G ++ E+ T
Sbjct: 198 RWM-SPES-LKDGVFTTYSDVWSFGVVLWEIATLA 230
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 95/209 (45%), Gaps = 21/209 (10%)
Query: 7 FKELGRGAFGRVFQAF-----DEHTGEAVAIKELKQRYASWEDCLNLREVKCLRKLNHSN 61
+ LG GAFG V++ ++ + VA+K L + + ++ L E + K NH N
Sbjct: 36 IRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQN 95
Query: 62 IVKLKELIQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWL------FQVFQGLS 115
IV+ + + +++ E M + R S+P A L + G
Sbjct: 96 IVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQ 155
Query: 116 YMHQNGFFHRDLKPEN-LLVSQG---IIKIADFGLAREIKSGPPYTN----YVGSRWYRA 167
Y+ +N F HRD+ N LL G + KI DFG+A++I Y + +W
Sbjct: 156 YLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAQDIYRASYYRKGGCAMLPVKWM-P 214
Query: 168 PEILLQSELYSSKADMWAMGAIMAELFTF 196
PE ++ +++SK D W+ G ++ E+F+
Sbjct: 215 PEAFMEG-IFTSKTDTWSFGVLLWEIFSL 242
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 102/199 (51%), Gaps = 15/199 (7%)
Query: 8 KELGRGAFGRV----FQAFDEHTGEAVAIKELKQRYASWEDCLNLREVKCLRKLNHSNIV 63
KELG G FG V +Q AV I + + + +D L L E +++L++ IV
Sbjct: 31 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDEL-LAEANVMQQLDNPYIV 89
Query: 64 KLKELIQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQNGFF 123
++ + + + + LV E E ++R + + I + QV G+ Y+ ++ F
Sbjct: 90 RMIGICEAESWM-LVMEMAELGPLNKYLQQNRHV-KDKNIIELVHQVSMGMKYLEESNFV 147
Query: 124 HRDLKPEN-LLVSQGIIKIADFGLAREIKSGPPYTNYVGS-----RWYRAPEILLQSELY 177
HRDL N LLV+Q KI+DFGL++ +++ Y +WY APE + + +
Sbjct: 148 HRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWY-APECINYYK-F 205
Query: 178 SSKADMWAMGAIMAELFTF 196
SSK+D+W+ G +M E F++
Sbjct: 206 SSKSDVWSFGVLMWEAFSY 224
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 101/215 (46%), Gaps = 21/215 (9%)
Query: 2 DKYSGFKELGRGAFGRVFQAF-----DEHTGEAVAIKELKQRYASWEDCLNLREVKCLRK 56
+K + +ELG+G+FG V++ + VAIK + + + E L E +++
Sbjct: 25 EKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKE 84
Query: 57 LNHSNIVKLKELIQNNNRLYLVFECM-----ECNLYQLMAARDRKLFSEPEIKAWLFQ-- 109
N ++V+L ++ ++ E M + L L + P + + Q
Sbjct: 85 FNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMA 144
Query: 110 --VFQGLSYMHQNGFFHRDLKPENLLVSQGI-IKIADFGLAREIKSGPPY----TNYVGS 162
+ G++Y++ N F HRDL N +V++ +KI DFG+ R+I Y +
Sbjct: 145 GEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPV 204
Query: 163 RWYRAPEILLQSELYSSKADMWAMGAIMAELFTFC 197
RW +PE L+ ++++ +D+W+ G ++ E+ T
Sbjct: 205 RWM-SPES-LKDGVFTTYSDVWSFGVVLWEIATLA 237
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 85/181 (46%), Gaps = 38/181 (20%)
Query: 108 FQVFQGLSYMHQNGFFHRDLKPENLLVSQ-GIIKIADFGLAREIKSGPPYTNYVGSRW-- 164
FQV +G+ ++ HRDL N+L+S+ ++KI DFGLAR+I P Y +R
Sbjct: 198 FQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPL 257
Query: 165 -YRAPEILLQSELYSSKADMWAMGAIMAELFTF-CPLFPGASEADQMYKICGVLGSPTMD 222
+ APE + +Y+ ++D+W+ G ++ E+F+ +PG ++ C L T
Sbjct: 258 KWMAPETIF-DRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEF---CRRLKEGT-- 311
Query: 223 SWADGLRQARAIKYQFPQLPRANLSALMPSASQDAISLFESLCSW--DPSKRPTAAEALQ 280
+ RA Y P++ + L W +PS+RPT +E ++
Sbjct: 312 -------RMRAPDYTTPEMYQTMLDC------------------WHGEPSQRPTFSELVE 346
Query: 281 H 281
H
Sbjct: 347 H 347
Score = 32.0 bits (71), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 36/70 (51%), Gaps = 6/70 (8%)
Query: 2 DKYSGFKELGRGAFGRVFQA----FDEH-TGEAVAIKELKQRYASWEDCLNLREVKCLRK 56
D+ K LGRGAFG+V +A D+ T VA+K LK+ E + E+K L
Sbjct: 20 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 79
Query: 57 LNHS-NIVKL 65
+ H N+V L
Sbjct: 80 IGHHLNVVNL 89
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 104/215 (48%), Gaps = 21/215 (9%)
Query: 2 DKYSGFKELGRGAFGRVFQAF-----DEHTGEAVAIKELKQRYASWEDCLNLREVKCLRK 56
+K + +ELG+G+FG V++ + VAIK + + + E L E +++
Sbjct: 12 EKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKE 71
Query: 57 LNHSNIVKLKELIQNNNRLYLVFECM-ECNLYQLMAA-----RDRKLFSEPEIKAWL--- 107
N ++V+L ++ ++ E M +L + + + + + P + +
Sbjct: 72 FNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMA 131
Query: 108 FQVFQGLSYMHQNGFFHRDLKPENLLVSQGI-IKIADFGLAREIKSGPPY----TNYVGS 162
++ G++Y++ N F HRDL N +V++ +KI DFG+ R+I Y +
Sbjct: 132 GEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPV 191
Query: 163 RWYRAPEILLQSELYSSKADMWAMGAIMAELFTFC 197
RW +PE L+ ++++ +D+W+ G ++ E+ T
Sbjct: 192 RWM-SPES-LKDGVFTTYSDVWSFGVVLWEIATLA 224
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 104/215 (48%), Gaps = 21/215 (9%)
Query: 2 DKYSGFKELGRGAFGRVFQAF-----DEHTGEAVAIKELKQRYASWEDCLNLREVKCLRK 56
+K + +ELG+G+FG V++ + VAIK + + + E L E +++
Sbjct: 18 EKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKE 77
Query: 57 LNHSNIVKLKELIQNNNRLYLVFECM-ECNLYQLMAA-----RDRKLFSEPEIKAWL--- 107
N ++V+L ++ ++ E M +L + + + + + P + +
Sbjct: 78 FNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMA 137
Query: 108 FQVFQGLSYMHQNGFFHRDLKPENLLVSQGI-IKIADFGLAREIKSGPPY----TNYVGS 162
++ G++Y++ N F HRDL N +V++ +KI DFG+ R+I Y +
Sbjct: 138 GEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPV 197
Query: 163 RWYRAPEILLQSELYSSKADMWAMGAIMAELFTFC 197
RW +PE L+ ++++ +D+W+ G ++ E+ T
Sbjct: 198 RWM-SPES-LKDGVFTTYSDVWSFGVVLWEIATLA 230
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 102/199 (51%), Gaps = 15/199 (7%)
Query: 8 KELGRGAFGRV----FQAFDEHTGEAVAIKELKQRYASWEDCLNLREVKCLRKLNHSNIV 63
KELG G FG V +Q AV I + + + +D L L E +++L++ IV
Sbjct: 33 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDEL-LAEANVMQQLDNPYIV 91
Query: 64 KLKELIQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQNGFF 123
++ + + + + LV E E ++R + + I + QV G+ Y+ ++ F
Sbjct: 92 RMIGICEAESWM-LVMEMAELGPLNKYLQQNRHV-KDKNIIELVHQVSMGMKYLEESNFV 149
Query: 124 HRDLKPEN-LLVSQGIIKIADFGLAREIKSGPPYTNYVGS-----RWYRAPEILLQSELY 177
HRDL N LLV+Q KI+DFGL++ +++ Y +WY APE + + +
Sbjct: 150 HRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWY-APECINYYK-F 207
Query: 178 SSKADMWAMGAIMAELFTF 196
SSK+D+W+ G +M E F++
Sbjct: 208 SSKSDVWSFGVLMWEAFSY 226
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 102/199 (51%), Gaps = 15/199 (7%)
Query: 8 KELGRGAFGRV----FQAFDEHTGEAVAIKELKQRYASWEDCLNLREVKCLRKLNHSNIV 63
KELG G FG V +Q AV I + + + +D L L E +++L++ IV
Sbjct: 33 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDEL-LAEANVMQQLDNPYIV 91
Query: 64 KLKELIQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQNGFF 123
++ + + + + LV E E ++R + + I + QV G+ Y+ ++ F
Sbjct: 92 RMIGICEAESWM-LVMEMAELGPLNKYLQQNRHV-KDKNIIELVHQVSMGMKYLEESNFV 149
Query: 124 HRDLKPEN-LLVSQGIIKIADFGLAREIKSGPPYTNYVGS-----RWYRAPEILLQSELY 177
HRDL N LLV+Q KI+DFGL++ +++ Y +WY APE + + +
Sbjct: 150 HRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWY-APECINYYK-F 207
Query: 178 SSKADMWAMGAIMAELFTF 196
SSK+D+W+ G +M E F++
Sbjct: 208 SSKSDVWSFGVLMWEAFSY 226
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 104/215 (48%), Gaps = 21/215 (9%)
Query: 2 DKYSGFKELGRGAFGRVFQAF-----DEHTGEAVAIKELKQRYASWEDCLNLREVKCLRK 56
+K + +ELG+G+FG V++ + VAIK + + + E L E +++
Sbjct: 16 EKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKE 75
Query: 57 LNHSNIVKLKELIQNNNRLYLVFECM-ECNLYQLMAA-----RDRKLFSEPEIKAWL--- 107
N ++V+L ++ ++ E M +L + + + + + P + +
Sbjct: 76 FNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMA 135
Query: 108 FQVFQGLSYMHQNGFFHRDLKPENLLVSQGI-IKIADFGLAREIKSGPPY----TNYVGS 162
++ G++Y++ N F HRDL N +V++ +KI DFG+ R+I Y +
Sbjct: 136 GEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPV 195
Query: 163 RWYRAPEILLQSELYSSKADMWAMGAIMAELFTFC 197
RW +PE L+ ++++ +D+W+ G ++ E+ T
Sbjct: 196 RWM-SPES-LKDGVFTTYSDVWSFGVVLWEIATLA 228
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 85/181 (46%), Gaps = 38/181 (20%)
Query: 108 FQVFQGLSYMHQNGFFHRDLKPENLLVSQ-GIIKIADFGLAREIKSGPPYTNYVGSRW-- 164
FQV +G+ ++ HRDL N+L+S+ ++KI DFGLAR+I P Y +R
Sbjct: 205 FQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPL 264
Query: 165 -YRAPEILLQSELYSSKADMWAMGAIMAELFTF-CPLFPGASEADQMYKICGVLGSPTMD 222
+ APE + +Y+ ++D+W+ G ++ E+F+ +PG ++ C L T
Sbjct: 265 KWMAPETIF-DRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEF---CRRLKEGT-- 318
Query: 223 SWADGLRQARAIKYQFPQLPRANLSALMPSASQDAISLFESLCSW--DPSKRPTAAEALQ 280
+ RA Y P++ + L W +PS+RPT +E ++
Sbjct: 319 -------RMRAPDYTTPEMYQTMLDC------------------WHGEPSQRPTFSELVE 353
Query: 281 H 281
H
Sbjct: 354 H 354
Score = 32.3 bits (72), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 36/70 (51%), Gaps = 6/70 (8%)
Query: 2 DKYSGFKELGRGAFGRVFQA----FDEH-TGEAVAIKELKQRYASWEDCLNLREVKCLRK 56
D+ K LGRGAFG+V +A D+ T VA+K LK+ E + E+K L
Sbjct: 27 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 86
Query: 57 LNHS-NIVKL 65
+ H N+V L
Sbjct: 87 IGHHLNVVNL 96
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 85/181 (46%), Gaps = 38/181 (20%)
Query: 108 FQVFQGLSYMHQNGFFHRDLKPENLLVSQ-GIIKIADFGLAREIKSGPPYTNYVGSRW-- 164
FQV +G+ ++ HRDL N+L+S+ ++KI DFGLAR+I P Y +R
Sbjct: 200 FQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPL 259
Query: 165 -YRAPEILLQSELYSSKADMWAMGAIMAELFTF-CPLFPGASEADQMYKICGVLGSPTMD 222
+ APE + +Y+ ++D+W+ G ++ E+F+ +PG ++ C L T
Sbjct: 260 KWMAPETIF-DRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEF---CRRLKEGT-- 313
Query: 223 SWADGLRQARAIKYQFPQLPRANLSALMPSASQDAISLFESLCSW--DPSKRPTAAEALQ 280
+ RA Y P++ + L W +PS+RPT +E ++
Sbjct: 314 -------RMRAPDYTTPEMYQTMLDC------------------WHGEPSQRPTFSELVE 348
Query: 281 H 281
H
Sbjct: 349 H 349
Score = 32.3 bits (72), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 36/70 (51%), Gaps = 6/70 (8%)
Query: 2 DKYSGFKELGRGAFGRVFQA----FDEH-TGEAVAIKELKQRYASWEDCLNLREVKCLRK 56
D+ K LGRGAFG+V +A D+ T VA+K LK+ E + E+K L
Sbjct: 22 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 81
Query: 57 LNHS-NIVKL 65
+ H N+V L
Sbjct: 82 IGHHLNVVNL 91
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 104/215 (48%), Gaps = 21/215 (9%)
Query: 2 DKYSGFKELGRGAFGRVFQAF-----DEHTGEAVAIKELKQRYASWEDCLNLREVKCLRK 56
+K + +ELG+G+FG V++ + VAIK + + + E L E +++
Sbjct: 19 EKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKE 78
Query: 57 LNHSNIVKLKELIQNNNRLYLVFECM-ECNLYQLMAA-----RDRKLFSEPEIKAWL--- 107
N ++V+L ++ ++ E M +L + + + + + P + +
Sbjct: 79 FNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMA 138
Query: 108 FQVFQGLSYMHQNGFFHRDLKPENLLVSQGI-IKIADFGLAREIKSGPPY----TNYVGS 162
++ G++Y++ N F HRDL N +V++ +KI DFG+ R+I Y +
Sbjct: 139 GEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPV 198
Query: 163 RWYRAPEILLQSELYSSKADMWAMGAIMAELFTFC 197
RW +PE L+ ++++ +D+W+ G ++ E+ T
Sbjct: 199 RWM-SPES-LKDGVFTTYSDVWSFGVVLWEIATLA 231
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 85/181 (46%), Gaps = 38/181 (20%)
Query: 108 FQVFQGLSYMHQNGFFHRDLKPENLLVSQ-GIIKIADFGLAREIKSGPPYTNYVGSRW-- 164
FQV +G+ ++ HRDL N+L+S+ ++KI DFGLAR+I P Y +R
Sbjct: 207 FQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPL 266
Query: 165 -YRAPEILLQSELYSSKADMWAMGAIMAELFTF-CPLFPGASEADQMYKICGVLGSPTMD 222
+ APE + +Y+ ++D+W+ G ++ E+F+ +PG ++ C L T
Sbjct: 267 KWMAPETIF-DRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEF---CRRLKEGT-- 320
Query: 223 SWADGLRQARAIKYQFPQLPRANLSALMPSASQDAISLFESLCSW--DPSKRPTAAEALQ 280
+ RA Y P++ + L W +PS+RPT +E ++
Sbjct: 321 -------RMRAPDYTTPEMYQTMLDC------------------WHGEPSQRPTFSELVE 355
Query: 281 H 281
H
Sbjct: 356 H 356
Score = 32.3 bits (72), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 36/70 (51%), Gaps = 6/70 (8%)
Query: 2 DKYSGFKELGRGAFGRVFQA----FDEH-TGEAVAIKELKQRYASWEDCLNLREVKCLRK 56
D+ K LGRGAFG+V +A D+ T VA+K LK+ E + E+K L
Sbjct: 29 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 88
Query: 57 LNHS-NIVKL 65
+ H N+V L
Sbjct: 89 IGHHLNVVNL 98
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 104/218 (47%), Gaps = 27/218 (12%)
Query: 2 DKYSGFKELGRGAFGRVFQ--AFDEHTGEA---VAIKELKQRYASWEDCLNLREVKCLRK 56
+K + +ELG+G+FG V++ A D GEA VA+K + + + E L E ++
Sbjct: 17 EKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKG 76
Query: 57 LNHSNIVKLKELIQNNNRLYLVFECM-ECNLYQLMAARDRKLFSEP--------EIKAWL 107
++V+L ++ +V E M +L + + + + P E+
Sbjct: 77 FTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMA 136
Query: 108 FQVFQGLSYMHQNGFFHRDLKPENLLVSQGI-IKIADFGLAREI-------KSGPPYTNY 159
++ G++Y++ F HRDL N +V+ +KI DFG+ R+I K G
Sbjct: 137 AEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGG---KGL 193
Query: 160 VGSRWYRAPEILLQSELYSSKADMWAMGAIMAELFTFC 197
+ RW APE L+ ++++ +DMW+ G ++ E+ +
Sbjct: 194 LPVRWM-APES-LKDGVFTTSSDMWSFGVVLWEITSLA 229
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 104/218 (47%), Gaps = 27/218 (12%)
Query: 2 DKYSGFKELGRGAFGRVFQ--AFDEHTGEA---VAIKELKQRYASWEDCLNLREVKCLRK 56
+K + +ELG+G+FG V++ A D GEA VA+K + + + E L E ++
Sbjct: 17 EKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKG 76
Query: 57 LNHSNIVKLKELIQNNNRLYLVFECM-ECNLYQLMAARDRKLFSEP--------EIKAWL 107
++V+L ++ +V E M +L + + + + P E+
Sbjct: 77 FTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMA 136
Query: 108 FQVFQGLSYMHQNGFFHRDLKPENLLVSQGI-IKIADFGLAREI-------KSGPPYTNY 159
++ G++Y++ F HRDL N +V+ +KI DFG+ R+I K G
Sbjct: 137 AEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGG---KGL 193
Query: 160 VGSRWYRAPEILLQSELYSSKADMWAMGAIMAELFTFC 197
+ RW APE L+ ++++ +DMW+ G ++ E+ +
Sbjct: 194 LPVRWM-APES-LKDGVFTTSSDMWSFGVVLWEITSLA 229
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 102/215 (47%), Gaps = 21/215 (9%)
Query: 2 DKYSGFKELGRGAFGRVFQ--AFDEHTGEA---VAIKELKQRYASWEDCLNLREVKCLRK 56
+K + +ELG+G+FG V++ A D GEA VA+K + + + E L E ++
Sbjct: 14 EKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKG 73
Query: 57 LNHSNIVKLKELIQNNNRLYLVFECM-ECNLYQLMAARDRKLFSEP--------EIKAWL 107
++V+L ++ +V E M +L + + + + P E+
Sbjct: 74 FTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMA 133
Query: 108 FQVFQGLSYMHQNGFFHRDLKPENLLVSQGI-IKIADFGLAREIKSGPPY----TNYVGS 162
++ G++Y++ F HRDL N +V+ +KI DFG+ R+I +
Sbjct: 134 AEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPV 193
Query: 163 RWYRAPEILLQSELYSSKADMWAMGAIMAELFTFC 197
RW APE L+ ++++ +DMW+ G ++ E+ +
Sbjct: 194 RWM-APES-LKDGVFTTSSDMWSFGVVLWEITSLA 226
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 102/199 (51%), Gaps = 15/199 (7%)
Query: 8 KELGRGAFGRV----FQAFDEHTGEAVAIKELKQRYASWEDCLNLREVKCLRKLNHSNIV 63
KELG G FG V +Q AV I + + + +D L L E +++L++ IV
Sbjct: 11 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDEL-LAEANVMQQLDNPYIV 69
Query: 64 KLKELIQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQNGFF 123
++ + + + + LV E E ++R + + I + QV G+ Y+ ++ F
Sbjct: 70 RMIGICEAESWM-LVMEMAELGPLNKYLQQNRHV-KDKNIIELVHQVSMGMKYLEESNFV 127
Query: 124 HRDLKPEN-LLVSQGIIKIADFGLAREIKSGPPYTNYVGS-----RWYRAPEILLQSELY 177
HRDL N LLV+Q KI+DFGL++ +++ Y +WY APE + + +
Sbjct: 128 HRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWY-APECINYYK-F 185
Query: 178 SSKADMWAMGAIMAELFTF 196
SSK+D+W+ G +M E F++
Sbjct: 186 SSKSDVWSFGVLMWEAFSY 204
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 102/199 (51%), Gaps = 15/199 (7%)
Query: 8 KELGRGAFGRV----FQAFDEHTGEAVAIKELKQRYASWEDCLNLREVKCLRKLNHSNIV 63
KELG G FG V +Q AV I + + + +D L L E +++L++ IV
Sbjct: 17 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDEL-LAEANVMQQLDNPYIV 75
Query: 64 KLKELIQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQNGFF 123
++ + + + + LV E E ++R + + I + QV G+ Y+ ++ F
Sbjct: 76 RMIGICEAESWM-LVMEMAELGPLNKYLQQNRHV-KDKNIIELVHQVSMGMKYLEESNFV 133
Query: 124 HRDLKPEN-LLVSQGIIKIADFGLAREIKSGPPYTNYVGS-----RWYRAPEILLQSELY 177
HRDL N LLV+Q KI+DFGL++ +++ Y +WY APE + + +
Sbjct: 134 HRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWY-APECINYYK-F 191
Query: 178 SSKADMWAMGAIMAELFTF 196
SSK+D+W+ G +M E F++
Sbjct: 192 SSKSDVWSFGVLMWEAFSY 210
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 100/215 (46%), Gaps = 13/215 (6%)
Query: 8 KELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLNLR-EVKCLRKLNHSNIVKLK 66
+ +G G+FG V++ + G+ VA+K L + + + EV LRK H NI+
Sbjct: 19 QRIGSGSFGTVYKG--KWHGD-VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFM 75
Query: 67 ELIQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQNGFFHRD 126
+ C +LY + + K F ++ Q QG+ Y+H HRD
Sbjct: 76 GYSTKPQLAIVTQWCEGSSLYHHLHIIETK-FEMIKLIDIARQTAQGMDYLHAKSIIHRD 134
Query: 127 LKPENLLVSQGI-IKIADFGLAREIKS----GPPYTNYVGSRWYRAPEILLQSEL--YSS 179
LK N+ + + + +KI DFGLA +KS + GS + APE++ + YS
Sbjct: 135 LKSNNIFLHEDLTVKIGDFGLA-TVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSF 193
Query: 180 KADMWAMGAIMAELFTFCPLFPGASEADQMYKICG 214
++D++A G ++ EL T + + DQ+ + G
Sbjct: 194 QSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVG 228
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 100/215 (46%), Gaps = 13/215 (6%)
Query: 8 KELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLNLR-EVKCLRKLNHSNIVKLK 66
+ +G G+FG V++ + G+ VA+K L + + + EV LRK H NI+
Sbjct: 16 QRIGSGSFGTVYKG--KWHGD-VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFM 72
Query: 67 ELIQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQNGFFHRD 126
+ C +LY + + K F ++ Q QG+ Y+H HRD
Sbjct: 73 GYSTKPQLAIVTQWCEGSSLYHHLHIIETK-FEMIKLIDIARQTAQGMDYLHAKSIIHRD 131
Query: 127 LKPENLLVSQGI-IKIADFGLAREIKS----GPPYTNYVGSRWYRAPEILLQSEL--YSS 179
LK N+ + + + +KI DFGLA +KS + GS + APE++ + YS
Sbjct: 132 LKSNNIFLHEDLTVKIGDFGLA-TVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSF 190
Query: 180 KADMWAMGAIMAELFTFCPLFPGASEADQMYKICG 214
++D++A G ++ EL T + + DQ+ + G
Sbjct: 191 QSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVG 225
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 101/215 (46%), Gaps = 21/215 (9%)
Query: 2 DKYSGFKELGRGAFGRVFQAF-----DEHTGEAVAIKELKQRYASWEDCLNLREVKCLRK 56
+K + +ELG+G+FG V++ + VAIK + + + E L E +++
Sbjct: 47 EKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKE 106
Query: 57 LNHSNIVKLKELIQNNNRLYLVFECM-----ECNLYQLMAARDRKLFSEPEIKAWLFQ-- 109
N ++V+L ++ ++ E M + L L + P + + Q
Sbjct: 107 FNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMA 166
Query: 110 --VFQGLSYMHQNGFFHRDLKPENLLVSQGI-IKIADFGLAREIKSGPPY----TNYVGS 162
+ G++Y++ N F HRDL N +V++ +KI DFG+ R+I Y +
Sbjct: 167 GEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPV 226
Query: 163 RWYRAPEILLQSELYSSKADMWAMGAIMAELFTFC 197
RW +PE L+ ++++ +D+W+ G ++ E+ T
Sbjct: 227 RWM-SPES-LKDGVFTTYSDVWSFGVVLWEIATLA 259
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 102/199 (51%), Gaps = 15/199 (7%)
Query: 8 KELGRGAFGRV----FQAFDEHTGEAVAIKELKQRYASWEDCLNLREVKCLRKLNHSNIV 63
KELG G FG V +Q AV I + + + +D L L E +++L++ IV
Sbjct: 13 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDEL-LAEANVMQQLDNPYIV 71
Query: 64 KLKELIQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQNGFF 123
++ + + + + LV E E ++R + + I + QV G+ Y+ ++ F
Sbjct: 72 RMIGICEAESWM-LVMEMAELGPLNKYLQQNRHV-KDKNIIELVHQVSMGMKYLEESNFV 129
Query: 124 HRDLKPEN-LLVSQGIIKIADFGLAREIKSGPPYTNYVGS-----RWYRAPEILLQSELY 177
HRDL N LLV+Q KI+DFGL++ +++ Y +WY APE + + +
Sbjct: 130 HRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWY-APECINYYK-F 187
Query: 178 SSKADMWAMGAIMAELFTF 196
SSK+D+W+ G +M E F++
Sbjct: 188 SSKSDVWSFGVLMWEAFSY 206
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 100/215 (46%), Gaps = 13/215 (6%)
Query: 8 KELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLNLR-EVKCLRKLNHSNIVKLK 66
+ +G G+FG V++ + G+ VA+K L + + + EV LRK H NI+
Sbjct: 41 QRIGSGSFGTVYKG--KWHGD-VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFM 97
Query: 67 ELIQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQNGFFHRD 126
+ C +LY + + K F ++ Q QG+ Y+H HRD
Sbjct: 98 GYSTKPQLAIVTQWCEGSSLYHHLHIIETK-FEMIKLIDIARQTAQGMDYLHAKSIIHRD 156
Query: 127 LKPENLLVSQGI-IKIADFGLAREIKS----GPPYTNYVGSRWYRAPEILLQSEL--YSS 179
LK N+ + + + +KI DFGLA +KS + GS + APE++ + YS
Sbjct: 157 LKSNNIFLHEDLTVKIGDFGLA-TVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSF 215
Query: 180 KADMWAMGAIMAELFTFCPLFPGASEADQMYKICG 214
++D++A G ++ EL T + + DQ+ + G
Sbjct: 216 QSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVG 250
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 100/215 (46%), Gaps = 13/215 (6%)
Query: 8 KELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLNLR-EVKCLRKLNHSNIVKLK 66
+ +G G+FG V++ + G+ VA+K L + + + EV LRK H NI+
Sbjct: 42 QRIGSGSFGTVYKG--KWHGD-VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFM 98
Query: 67 ELIQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQNGFFHRD 126
+ C +LY + + K F ++ Q QG+ Y+H HRD
Sbjct: 99 GYSTKPQLAIVTQWCEGSSLYHHLHIIETK-FEMIKLIDIARQTAQGMDYLHAKSIIHRD 157
Query: 127 LKPENLLVSQGI-IKIADFGLAREIKS----GPPYTNYVGSRWYRAPEILLQSEL--YSS 179
LK N+ + + + +KI DFGLA +KS + GS + APE++ + YS
Sbjct: 158 LKSNNIFLHEDLTVKIGDFGLA-TVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSF 216
Query: 180 KADMWAMGAIMAELFTFCPLFPGASEADQMYKICG 214
++D++A G ++ EL T + + DQ+ + G
Sbjct: 217 QSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVG 251
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 100/215 (46%), Gaps = 13/215 (6%)
Query: 8 KELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLNLR-EVKCLRKLNHSNIVKLK 66
+ +G G+FG V++ + G+ VA+K L + + + EV LRK H NI+
Sbjct: 19 QRIGSGSFGTVYKG--KWHGD-VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFM 75
Query: 67 ELIQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQNGFFHRD 126
+ C +LY + + K F ++ Q QG+ Y+H HRD
Sbjct: 76 GYSTKPQLAIVTQWCEGSSLYHHLHIIETK-FEMIKLIDIARQTAQGMDYLHAKSIIHRD 134
Query: 127 LKPENLLVSQGI-IKIADFGLAREIKS----GPPYTNYVGSRWYRAPEILLQSEL--YSS 179
LK N+ + + + +KI DFGLA +KS + GS + APE++ + YS
Sbjct: 135 LKSNNIFLHEDLTVKIGDFGLA-TVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSF 193
Query: 180 KADMWAMGAIMAELFTFCPLFPGASEADQMYKICG 214
++D++A G ++ EL T + + DQ+ + G
Sbjct: 194 QSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVG 228
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 100/215 (46%), Gaps = 13/215 (6%)
Query: 8 KELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLNLR-EVKCLRKLNHSNIVKLK 66
+ +G G+FG V++ + G+ VA+K L + + + EV LRK H NI+
Sbjct: 14 QRIGSGSFGTVYKG--KWHGD-VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFM 70
Query: 67 ELIQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQNGFFHRD 126
+ C +LY + + K F ++ Q QG+ Y+H HRD
Sbjct: 71 GYSTKPQLAIVTQWCEGSSLYHHLHIIETK-FEMIKLIDIARQTAQGMDYLHAKSIIHRD 129
Query: 127 LKPENLLVSQGI-IKIADFGLAREIKS----GPPYTNYVGSRWYRAPEILLQSEL--YSS 179
LK N+ + + + +KI DFGLA +KS + GS + APE++ + YS
Sbjct: 130 LKSNNIFLHEDLTVKIGDFGLA-TVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSF 188
Query: 180 KADMWAMGAIMAELFTFCPLFPGASEADQMYKICG 214
++D++A G ++ EL T + + DQ+ + G
Sbjct: 189 QSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVG 223
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 96/205 (46%), Gaps = 16/205 (7%)
Query: 3 KYSGFKELGRGAFGRVFQAFDEHTGEAV----AIKELKQRYASWEDCLNLREVKCLRKLN 58
++ K LG GAFG V++ GE V AIKEL++ + + L E + ++
Sbjct: 20 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 79
Query: 59 HSNIVKLKELIQNNNRLYLVFECME--CNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSY 116
+ ++ +L + + + L+ + M C L + +D + W Q+ +G++Y
Sbjct: 80 NPHVCRLLGICLTST-VQLIMQLMPFGCLLDYVREHKDN--IGSQYLLNWCVQIAKGMNY 136
Query: 117 MHQNGFFHRDLKPENLLV-SQGIIKIADFGLAR----EIKSGPPYTNYVGSRWYRAPEIL 171
+ HRDL N+LV + +KI DFGLA+ E K V +W IL
Sbjct: 137 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 196
Query: 172 LQSELYSSKADMWAMGAIMAELFTF 196
+Y+ ++D+W+ G + EL TF
Sbjct: 197 --HRIYTHQSDVWSYGVTVWELMTF 219
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 102/199 (51%), Gaps = 15/199 (7%)
Query: 8 KELGRGAFGRV----FQAFDEHTGEAVAIKELKQRYASWEDCLNLREVKCLRKLNHSNIV 63
KELG G FG V +Q AV I + + + +D L L E +++L++ IV
Sbjct: 23 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDEL-LAEANVMQQLDNPYIV 81
Query: 64 KLKELIQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQNGFF 123
++ + + + + LV E E ++R + + I + QV G+ Y+ ++ F
Sbjct: 82 RMIGICEAESWM-LVMEMAELGPLNKYLQQNRHV-KDKNIIELVHQVSMGMKYLEESNFV 139
Query: 124 HRDLKPEN-LLVSQGIIKIADFGLAREIKSGPPYTNYVGS-----RWYRAPEILLQSELY 177
HRDL N LLV+Q KI+DFGL++ +++ Y +WY APE + + +
Sbjct: 140 HRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWY-APECINYYK-F 197
Query: 178 SSKADMWAMGAIMAELFTF 196
SSK+D+W+ G +M E F++
Sbjct: 198 SSKSDVWSFGVLMWEAFSY 216
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 95/204 (46%), Gaps = 14/204 (6%)
Query: 3 KYSGFKELGRGAFGRVFQAFDEHTGEAV----AIKELKQRYASWEDCLNLREVKCLRKLN 58
++ K LG GAFG V++ GE V AIKEL++ + + L E + ++
Sbjct: 19 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 78
Query: 59 HSNIVKLKEL-IQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYM 117
+ ++ +L + + + +L + C L + +D + W Q+ +G++Y+
Sbjct: 79 NPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDN--IGSQYLLNWCVQIAKGMNYL 136
Query: 118 HQNGFFHRDLKPENLLV-SQGIIKIADFGLAR----EIKSGPPYTNYVGSRWYRAPEILL 172
HRDL N+LV + +KI DFGLA+ E K V +W IL
Sbjct: 137 EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL- 195
Query: 173 QSELYSSKADMWAMGAIMAELFTF 196
+Y+ ++D+W+ G + EL TF
Sbjct: 196 -HRIYTHQSDVWSYGVTVWELMTF 218
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 95/204 (46%), Gaps = 14/204 (6%)
Query: 3 KYSGFKELGRGAFGRVFQAFDEHTGEAV----AIKELKQRYASWEDCLNLREVKCLRKLN 58
++ K LG GAFG V++ GE V AIKEL++ + + L E + ++
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 77
Query: 59 HSNIVKLKEL-IQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYM 117
+ ++ +L + + + +L + C L + +D + W Q+ +G++Y+
Sbjct: 78 NPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDN--IGSQYLLNWCVQIAKGMNYL 135
Query: 118 HQNGFFHRDLKPENLLV-SQGIIKIADFGLAR----EIKSGPPYTNYVGSRWYRAPEILL 172
HRDL N+LV + +KI DFGLA+ E K V +W IL
Sbjct: 136 EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL- 194
Query: 173 QSELYSSKADMWAMGAIMAELFTF 196
+Y+ ++D+W+ G + EL TF
Sbjct: 195 -HRIYTHQSDVWSYGVTVWELMTF 217
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 96/205 (46%), Gaps = 16/205 (7%)
Query: 3 KYSGFKELGRGAFGRVFQAFDEHTGEAV----AIKELKQRYASWEDCLNLREVKCLRKLN 58
++ K LG GAFG V++ GE V AIKEL++ + + L E + ++
Sbjct: 17 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 76
Query: 59 HSNIVKLKELIQNNNRLYLVFECME--CNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSY 116
+ ++ +L + + + L+ + M C L + +D + W Q+ +G++Y
Sbjct: 77 NPHVCRLLGICLTST-VQLIMQLMPFGCLLDYVREHKDN--IGSQYLLNWCVQIAKGMNY 133
Query: 117 MHQNGFFHRDLKPENLLV-SQGIIKIADFGLAR----EIKSGPPYTNYVGSRWYRAPEIL 171
+ HRDL N+LV + +KI DFGLA+ E K V +W IL
Sbjct: 134 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 193
Query: 172 LQSELYSSKADMWAMGAIMAELFTF 196
+Y+ ++D+W+ G + EL TF
Sbjct: 194 --HRIYTHQSDVWSYGVTVWELMTF 216
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 101/208 (48%), Gaps = 21/208 (10%)
Query: 2 DKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLNLREVKCLRK----L 57
+ + K +GRGAFG V ++T A+K L + WE L E C R+ L
Sbjct: 90 EDFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNK----WE-MLKRAETACFREERDVL 144
Query: 58 NHSN---IVKLKELIQNNNRLYLVFEC-MECNLYQLMAARDRKLFSEPEIKAWLFQVFQG 113
+ + I L Q+ N LYLV + + +L L++ + KL E + ++ ++
Sbjct: 145 VNGDCQWITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKL-PEDMARFYIGEMVLA 203
Query: 114 LSYMHQNGFFHRDLKPENLLVS-QGIIKIADFGLAREIKSGPPYTNY--VGSRWYRAPEI 170
+ +HQ + HRD+KP+N+L+ G I++ADFG ++ + VG+ Y +PEI
Sbjct: 204 IDSIHQLHYVHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAVGTPDYISPEI 263
Query: 171 LLQSE----LYSSKADMWAMGAIMAELF 194
L E Y + D W++G M E+
Sbjct: 264 LQAMEDGMGKYGPECDWWSLGVCMYEML 291
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 96/205 (46%), Gaps = 16/205 (7%)
Query: 3 KYSGFKELGRGAFGRVFQAFDEHTGEAV----AIKELKQRYASWEDCLNLREVKCLRKLN 58
++ K LG GAFG V++ GE V AIKEL++ + + L E + ++
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 59 HSNIVKLKELIQNNNRLYLVFECME--CNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSY 116
+ ++ +L + + + L+ + M C L + +D + W Q+ +G++Y
Sbjct: 76 NPHVCRLLGICLTST-VQLIMQLMPFGCLLDYVREHKDN--IGSQYLLNWCVQIAKGMNY 132
Query: 117 MHQNGFFHRDLKPENLLV-SQGIIKIADFGLAR----EIKSGPPYTNYVGSRWYRAPEIL 171
+ HRDL N+LV + +KI DFGLA+ E K V +W IL
Sbjct: 133 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 192
Query: 172 LQSELYSSKADMWAMGAIMAELFTF 196
+Y+ ++D+W+ G + EL TF
Sbjct: 193 --HRIYTHQSDVWSYGVTVWELMTF 215
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 103/215 (47%), Gaps = 21/215 (9%)
Query: 2 DKYSGFKELGRGAFGRVFQ--AFDEHTGEA---VAIKELKQRYASWEDCLNLREVKCLRK 56
+K + +ELG+G+FG V++ A D GEA VA+K + + + E L E ++
Sbjct: 17 EKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKG 76
Query: 57 LNHSNIVKLKELIQNNNRLYLVFECM-ECNLYQLMAARDRKLFSEP--------EIKAWL 107
++V+L ++ +V E M +L + + + + P E+
Sbjct: 77 FTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMA 136
Query: 108 FQVFQGLSYMHQNGFFHRDLKPENLLVSQGI-IKIADFGLAREIKSGPPY----TNYVGS 162
++ G++Y++ F HR+L N +V+ +KI DFG+ R+I Y +
Sbjct: 137 AEIADGMAYLNAKKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPV 196
Query: 163 RWYRAPEILLQSELYSSKADMWAMGAIMAELFTFC 197
RW APE L+ ++++ +DMW+ G ++ E+ +
Sbjct: 197 RWM-APES-LKDGVFTTSSDMWSFGVVLWEITSLA 229
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 101/208 (48%), Gaps = 21/208 (10%)
Query: 2 DKYSGFKELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLNLREVKCLRK----L 57
+ + K +GRGAFG V ++T A+K L + WE L E C R+ L
Sbjct: 74 EDFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNK----WE-MLKRAETACFREERDVL 128
Query: 58 NHSN---IVKLKELIQNNNRLYLVFEC-MECNLYQLMAARDRKLFSEPEIKAWLFQVFQG 113
+ + I L Q+ N LYLV + + +L L++ + KL E + ++ ++
Sbjct: 129 VNGDCQWITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKL-PEDMARFYIGEMVLA 187
Query: 114 LSYMHQNGFFHRDLKPENLLVS-QGIIKIADFGLAREIKSGPPYTNY--VGSRWYRAPEI 170
+ +HQ + HRD+KP+N+L+ G I++ADFG ++ + VG+ Y +PEI
Sbjct: 188 IDSIHQLHYVHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAVGTPDYISPEI 247
Query: 171 LLQSE----LYSSKADMWAMGAIMAELF 194
L E Y + D W++G M E+
Sbjct: 248 LQAMEDGMGKYGPECDWWSLGVCMYEML 275
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 103/215 (47%), Gaps = 21/215 (9%)
Query: 2 DKYSGFKELGRGAFGRVFQ--AFDEHTGEA---VAIKELKQRYASWEDCLNLREVKCLRK 56
+K + +ELG+G+FG V++ A D GEA VA+K + + + E L E ++
Sbjct: 18 EKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKG 77
Query: 57 LNHSNIVKLKELIQNNNRLYLVFECM-ECNLYQLMAARDRKLFSEP--------EIKAWL 107
++V+L ++ +V E M +L + + + + P E+
Sbjct: 78 FTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMA 137
Query: 108 FQVFQGLSYMHQNGFFHRDLKPENLLVSQGI-IKIADFGLAREIKSGPPY----TNYVGS 162
++ G++Y++ F HR+L N +V+ +KI DFG+ R+I Y +
Sbjct: 138 AEIADGMAYLNAKKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPV 197
Query: 163 RWYRAPEILLQSELYSSKADMWAMGAIMAELFTFC 197
RW APE L+ ++++ +DMW+ G ++ E+ +
Sbjct: 198 RWM-APES-LKDGVFTTSSDMWSFGVVLWEITSLA 230
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 102/198 (51%), Gaps = 13/198 (6%)
Query: 8 KELGRGAFGRV----FQAFDEHTGEAVAIKELKQRYASWEDCLNLREVKCLRKLNHSNIV 63
KELG G FG V +Q AV I + + + +D L L E +++L++ IV
Sbjct: 17 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDEL-LAEANVMQQLDNPYIV 75
Query: 64 KLKELIQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQNGFF 123
++ + + + + LV E E ++R + + I + QV G+ Y+ ++ F
Sbjct: 76 RMIGICEAESWM-LVMEMAELGPLNKYLQQNRHV-KDKNIIELVHQVSMGMKYLEESNFV 133
Query: 124 HRDLKPEN-LLVSQGIIKIADFGLAREIKSGP-PYTNYVGSRW---YRAPEILLQSELYS 178
HRDL N LLV+Q KI+DFGL++ +++ Y +W + APE + + +S
Sbjct: 134 HRDLAARNVLLVTQHYAKISDFGLSKALRADENXYKAQTHGKWPVKWYAPECINYYK-FS 192
Query: 179 SKADMWAMGAIMAELFTF 196
SK+D+W+ G +M E F++
Sbjct: 193 SKSDVWSFGVLMWEAFSY 210
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 103/209 (49%), Gaps = 24/209 (11%)
Query: 2 DKYSGFKELGRGAFGRVFQAFDEHTGEAVAIK-----ELKQRYAS---WEDCLNLREVKC 53
+ Y K +GRGAFG V + + + A+K E+ +R S WE+ R++
Sbjct: 75 EDYDVVKVIGRGAFGEVQLVRHKASQKVYAMKLLSKFEMIKRSDSAFFWEE----RDIMA 130
Query: 54 LRKLNHSNIVKLKELIQNNNRLYLVFECMEC-NLYQLMAARDRKLFSEPEIKAWLFQVFQ 112
N +V+L Q++ LY+V E M +L LM+ D E K + +V
Sbjct: 131 FA--NSPWVVQLFCAFQDDKYLYMVMEYMPGGDLVNLMSNYD---VPEKWAKFYTAEVVL 185
Query: 113 GLSYMHQNGFFHRDLKPENLLVSQ-GIIKIADFGLAREI-KSGPPYTNY-VGSRWYRAPE 169
L +H G HRD+KP+N+L+ + G +K+ADFG ++ ++G + + VG+ Y +PE
Sbjct: 186 ALDAIHSMGLIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETGMVHCDTAVGTPDYISPE 245
Query: 170 ILLQ---SELYSSKADMWAMGAIMAELFT 195
+L Y + D W++G + E+
Sbjct: 246 VLKSQGGDGYYGRECDWWSVGVFLFEMLV 274
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 92/203 (45%), Gaps = 12/203 (5%)
Query: 3 KYSGFKELGRGAFGRVFQAFDEHTGEAV----AIKELKQRYASWEDCLNLREVKCLRKLN 58
++ K LG GAFG V++ GE V AIKEL++ + + L E + ++
Sbjct: 17 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 76
Query: 59 HSNIVKLKELIQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMH 118
+ ++ +L + + + L+ + M + + W Q+ +G++Y+
Sbjct: 77 NPHVCRLLGICLTST-VQLIMQLMPFGXLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE 135
Query: 119 QNGFFHRDLKPENLLV-SQGIIKIADFGLAR----EIKSGPPYTNYVGSRWYRAPEILLQ 173
HRDL N+LV + +KI DFGLA+ E K V +W IL
Sbjct: 136 DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL-- 193
Query: 174 SELYSSKADMWAMGAIMAELFTF 196
+Y+ ++D+W+ G + EL TF
Sbjct: 194 HRIYTHQSDVWSYGVTVWELMTF 216
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 96/205 (46%), Gaps = 16/205 (7%)
Query: 3 KYSGFKELGRGAFGRVFQAFDEHTGEAV----AIKELKQRYASWEDCLNLREVKCLRKLN 58
++ K LG GAFG V++ GE V AIKEL++ + + L E + ++
Sbjct: 13 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 72
Query: 59 HSNIVKLKELIQNNNRLYLVFECME--CNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSY 116
+ ++ +L + + + L+ + M C L + +D + W Q+ +G++Y
Sbjct: 73 NPHVCRLLGICLTST-VQLITQLMPFGCLLDYVREHKDN--IGSQYLLNWCVQIAEGMNY 129
Query: 117 MHQNGFFHRDLKPENLLV-SQGIIKIADFGLAR----EIKSGPPYTNYVGSRWYRAPEIL 171
+ HRDL N+LV + +KI DFGLA+ E K V +W IL
Sbjct: 130 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 189
Query: 172 LQSELYSSKADMWAMGAIMAELFTF 196
+Y+ ++D+W+ G + EL TF
Sbjct: 190 --HRIYTHQSDVWSYGVTVWELMTF 212
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 96/205 (46%), Gaps = 16/205 (7%)
Query: 3 KYSGFKELGRGAFGRVFQAFDEHTGEAV----AIKELKQRYASWEDCLNLREVKCLRKLN 58
++ K LG GAFG V++ GE V AIKEL++ + + L E + ++
Sbjct: 22 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 81
Query: 59 HSNIVKLKELIQNNNRLYLVFECME--CNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSY 116
+ ++ +L + + + L+ + M C L + +D + W Q+ +G++Y
Sbjct: 82 NPHVCRLLGICLTST-VQLITQLMPFGCLLDYVREHKDN--IGSQYLLNWCVQIAKGMNY 138
Query: 117 MHQNGFFHRDLKPENLLV-SQGIIKIADFGLAR----EIKSGPPYTNYVGSRWYRAPEIL 171
+ HRDL N+LV + +KI DFGLA+ E K V +W IL
Sbjct: 139 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 198
Query: 172 LQSELYSSKADMWAMGAIMAELFTF 196
+Y+ ++D+W+ G + EL TF
Sbjct: 199 --HRIYTHQSDVWSYGVTVWELMTF 221
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 100/215 (46%), Gaps = 13/215 (6%)
Query: 8 KELGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLNLR-EVKCLRKLNHSNIVKLK 66
+ +G G+FG V++ + G+ VA+K L + + + EV LRK H NI+
Sbjct: 14 QRIGSGSFGTVYKG--KWHGD-VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFM 70
Query: 67 ELIQNNNRLYLVFECMECNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQNGFFHRD 126
+ C +LY + + K F ++ Q QG+ Y+H HRD
Sbjct: 71 GYSTAPQLAIVTQWCEGSSLYHHLHIIETK-FEMIKLIDIARQTAQGMDYLHAKSIIHRD 129
Query: 127 LKPENLLVSQGI-IKIADFGLAREIKS----GPPYTNYVGSRWYRAPEILLQSEL--YSS 179
LK N+ + + + +KI DFGLA +KS + GS + APE++ + YS
Sbjct: 130 LKSNNIFLHEDLTVKIGDFGLA-TVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSF 188
Query: 180 KADMWAMGAIMAELFTFCPLFPGASEADQMYKICG 214
++D++A G ++ EL T + + DQ+ + G
Sbjct: 189 QSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVG 223
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 95/212 (44%), Gaps = 35/212 (16%)
Query: 10 LGRGAFGRVFQAFDEHTGEAVAIKELKQRYASWEDCLNLREVKCLRKLN-HSNIVKL--- 65
L G F V++A D +G A+K L + ++EV ++KL+ H NIV+
Sbjct: 36 LAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAI-IQEVCFMKKLSGHPNIVQFCSA 94
Query: 66 -----KELIQNNNRLYLVFECMECNLYQLMAARD-RKLFSEPEIKAWLFQVFQGLSYMHQ 119
+E L+ E + L + + + R S + +Q + + +MH+
Sbjct: 95 ASIGKEESDTGQAEFLLLTELCKGQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHR 154
Query: 120 NG--FFHRDLKPENLLVS-QGIIKIADFGLAREIKSGPPYTNYVGSR------------- 163
HRDLK ENLL+S QG IK+ DFG A I P Y+ R
Sbjct: 155 QKPPIIHRDLKVENLLLSNQGTIKLCDFGSATTISHYPDYSWSAQRRALVEEEITRNTTP 214
Query: 164 WYRAPEILLQSELYSS-----KADMWAMGAIM 190
YR PEI+ +LYS+ K D+WA+G I+
Sbjct: 215 MYRTPEII---DLYSNFPIGEKQDIWALGCIL 243
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 91/175 (52%), Gaps = 14/175 (8%)
Query: 30 VAIKEL-KQRYASWEDCLNLR----EVKCLRKLNH--SNIVKLKELIQNNNRLYLVFECM 82
VAIK + K R + W + N EV L+K++ S +++L + + + L+ E
Sbjct: 79 VAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERP 138
Query: 83 EC--NLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQNGFFHRDLKPENLLV--SQGI 138
E +L+ + +R E +++ +QV + + + H G HRD+K EN+L+ ++G
Sbjct: 139 EPVQDLFDFIT--ERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGE 196
Query: 139 IKIADFGLAREIKSGPPYTNYVGSRWYRAPEILLQSELYSSKADMWAMGAIMAEL 193
+K+ DFG +K YT++ G+R Y PE + + A +W++G ++ ++
Sbjct: 197 LKLIDFGSGALLKDT-VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDM 250
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 96/205 (46%), Gaps = 16/205 (7%)
Query: 3 KYSGFKELGRGAFGRVFQAFDEHTGEAV----AIKELKQRYASWEDCLNLREVKCLRKLN 58
++ K LG GAFG V++ GE V AIKEL++ + + L E + ++
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 77
Query: 59 HSNIVKLKELIQNNNRLYLVFECME--CNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSY 116
+ ++ +L + + + L+ + M C L + +D + W Q+ +G++Y
Sbjct: 78 NPHVCRLLGICLTST-VQLITQLMPFGCLLDYVREHKDN--IGSQYLLNWCVQIAKGMNY 134
Query: 117 MHQNGFFHRDLKPENLLV-SQGIIKIADFGLAR----EIKSGPPYTNYVGSRWYRAPEIL 171
+ HRDL N+LV + +KI DFGLA+ E K V +W IL
Sbjct: 135 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 194
Query: 172 LQSELYSSKADMWAMGAIMAELFTF 196
+Y+ ++D+W+ G + EL TF
Sbjct: 195 --HRIYTHQSDVWSYGVTVWELMTF 217
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 96/205 (46%), Gaps = 16/205 (7%)
Query: 3 KYSGFKELGRGAFGRVFQAFDEHTGEAV----AIKELKQRYASWEDCLNLREVKCLRKLN 58
++ K LG GAFG V++ GE V AIKEL++ + + L E + ++
Sbjct: 19 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 78
Query: 59 HSNIVKLKELIQNNNRLYLVFECME--CNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSY 116
+ ++ +L + + + L+ + M C L + +D + W Q+ +G++Y
Sbjct: 79 NPHVCRLLGICLTST-VQLITQLMPFGCLLDYVREHKDN--IGSQYLLNWCVQIAKGMNY 135
Query: 117 MHQNGFFHRDLKPENLLV-SQGIIKIADFGLAR----EIKSGPPYTNYVGSRWYRAPEIL 171
+ HRDL N+LV + +KI DFGLA+ E K V +W IL
Sbjct: 136 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 195
Query: 172 LQSELYSSKADMWAMGAIMAELFTF 196
+Y+ ++D+W+ G + EL TF
Sbjct: 196 --HRIYTHQSDVWSYGVTVWELMTF 218
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 96/205 (46%), Gaps = 16/205 (7%)
Query: 3 KYSGFKELGRGAFGRVFQAFDEHTGEAV----AIKELKQRYASWEDCLNLREVKCLRKLN 58
++ K LG GAFG V++ GE V AIKEL++ + + L E + ++
Sbjct: 19 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 78
Query: 59 HSNIVKLKELIQNNNRLYLVFECME--CNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSY 116
+ ++ +L + + + L+ + M C L + +D + W Q+ +G++Y
Sbjct: 79 NPHVCRLLGICLTST-VQLITQLMPFGCLLDYVREHKDN--IGSQYLLNWCVQIAKGMNY 135
Query: 117 MHQNGFFHRDLKPENLLV-SQGIIKIADFGLAR----EIKSGPPYTNYVGSRWYRAPEIL 171
+ HRDL N+LV + +KI DFGLA+ E K V +W IL
Sbjct: 136 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 195
Query: 172 LQSELYSSKADMWAMGAIMAELFTF 196
+Y+ ++D+W+ G + EL TF
Sbjct: 196 --HRIYTHQSDVWSYGVTVWELMTF 218
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 96/205 (46%), Gaps = 16/205 (7%)
Query: 3 KYSGFKELGRGAFGRVFQAFDEHTGEAV----AIKELKQRYASWEDCLNLREVKCLRKLN 58
++ K LG GAFG V++ GE V AIKEL++ + + L E + ++
Sbjct: 23 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 82
Query: 59 HSNIVKLKELIQNNNRLYLVFECME--CNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSY 116
+ ++ +L + + + L+ + M C L + +D + W Q+ +G++Y
Sbjct: 83 NPHVCRLLGICLTST-VQLITQLMPFGCLLDYVREHKDN--IGSQYLLNWCVQIAKGMNY 139
Query: 117 MHQNGFFHRDLKPENLLV-SQGIIKIADFGLAR----EIKSGPPYTNYVGSRWYRAPEIL 171
+ HRDL N+LV + +KI DFGLA+ E K V +W IL
Sbjct: 140 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 199
Query: 172 LQSELYSSKADMWAMGAIMAELFTF 196
+Y+ ++D+W+ G + EL TF
Sbjct: 200 --HRIYTHQSDVWSYGVTVWELMTF 222
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 100/215 (46%), Gaps = 21/215 (9%)
Query: 2 DKYSGFKELGRGAFGRVFQAF-----DEHTGEAVAIKELKQRYASWEDCLNLREVKCLRK 56
+K + +ELG+G+FG V++ + VAIK + + + E L E +++
Sbjct: 12 EKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKE 71
Query: 57 LNHSNIVKLKELIQNNNRLYLVFECM-----ECNLYQLMAARDRKLFSEPEIKAWLFQ-- 109
N ++V+L ++ ++ E M + L L + P + + Q
Sbjct: 72 FNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMA 131
Query: 110 --VFQGLSYMHQNGFFHRDLKPENLLVSQGI-IKIADFGLAREIKSGPPY----TNYVGS 162
+ G++Y++ N F HRDL N V++ +KI DFG+ R+I Y +
Sbjct: 132 GEIADGMAYLNANKFVHRDLAARNCXVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPV 191
Query: 163 RWYRAPEILLQSELYSSKADMWAMGAIMAELFTFC 197
RW +PE L+ ++++ +D+W+ G ++ E+ T
Sbjct: 192 RWM-SPES-LKDGVFTTYSDVWSFGVVLWEIATLA 224
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 96/205 (46%), Gaps = 16/205 (7%)
Query: 3 KYSGFKELGRGAFGRVFQAFDEHTGEAV----AIKELKQRYASWEDCLNLREVKCLRKLN 58
++ K LG GAFG V++ GE V AIKEL++ + + L E + ++
Sbjct: 26 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 85
Query: 59 HSNIVKLKELIQNNNRLYLVFECME--CNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSY 116
+ ++ +L + + + L+ + M C L + +D + W Q+ +G++Y
Sbjct: 86 NPHVCRLLGICLTST-VQLITQLMPFGCLLDYVREHKDN--IGSQYLLNWCVQIAKGMNY 142
Query: 117 MHQNGFFHRDLKPENLLV-SQGIIKIADFGLAR----EIKSGPPYTNYVGSRWYRAPEIL 171
+ HRDL N+LV + +KI DFGLA+ E K V +W IL
Sbjct: 143 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 202
Query: 172 LQSELYSSKADMWAMGAIMAELFTF 196
+Y+ ++D+W+ G + EL TF
Sbjct: 203 --HRIYTHQSDVWSYGVTVWELMTF 225
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 96/205 (46%), Gaps = 16/205 (7%)
Query: 3 KYSGFKELGRGAFGRVFQAFDEHTGEAV----AIKELKQRYASWEDCLNLREVKCLRKLN 58
++ K LG GAFG V++ GE V AIKEL++ + + L E + ++
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 59 HSNIVKLKELIQNNNRLYLVFECME--CNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSY 116
+ ++ +L + + + L+ + M C L + +D + W Q+ +G++Y
Sbjct: 76 NPHVCRLLGICLTST-VQLITQLMPFGCLLDYVREHKDN--IGSQYLLNWCVQIAKGMNY 132
Query: 117 MHQNGFFHRDLKPENLLV-SQGIIKIADFGLAR----EIKSGPPYTNYVGSRWYRAPEIL 171
+ HRDL N+LV + +KI DFGLA+ E K V +W IL
Sbjct: 133 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 192
Query: 172 LQSELYSSKADMWAMGAIMAELFTF 196
+Y+ ++D+W+ G + EL TF
Sbjct: 193 --HRIYTHQSDVWSYGVTVWELMTF 215
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 96/205 (46%), Gaps = 16/205 (7%)
Query: 3 KYSGFKELGRGAFGRVFQAFDEHTGEAV----AIKELKQRYASWEDCLNLREVKCLRKLN 58
++ K LG GAFG V++ GE V AIKEL++ + + L E + ++
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 59 HSNIVKLKELIQNNNRLYLVFECME--CNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSY 116
+ ++ +L + + + L+ + M C L + +D + W Q+ +G++Y
Sbjct: 76 NPHVCRLLGICLTST-VQLITQLMPFGCLLDYVREHKDN--IGSQYLLNWCVQIAKGMNY 132
Query: 117 MHQNGFFHRDLKPENLLV-SQGIIKIADFGLAR----EIKSGPPYTNYVGSRWYRAPEIL 171
+ HRDL N+LV + +KI DFGLA+ E K V +W IL
Sbjct: 133 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 192
Query: 172 LQSELYSSKADMWAMGAIMAELFTF 196
+Y+ ++D+W+ G + EL TF
Sbjct: 193 --HRIYTHQSDVWSYGVTVWELMTF 215
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 96/205 (46%), Gaps = 16/205 (7%)
Query: 3 KYSGFKELGRGAFGRVFQAFDEHTGEAV----AIKELKQRYASWEDCLNLREVKCLRKLN 58
++ K LG GAFG V++ GE V AIKEL++ + + L E + ++
Sbjct: 19 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 78
Query: 59 HSNIVKLKELIQNNNRLYLVFECME--CNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSY 116
+ ++ +L + + + L+ + M C L + +D + W Q+ +G++Y
Sbjct: 79 NPHVCRLLGICLTST-VQLITQLMPFGCLLDYVREHKDN--IGSQYLLNWCVQIAKGMNY 135
Query: 117 MHQNGFFHRDLKPENLLV-SQGIIKIADFGLAR----EIKSGPPYTNYVGSRWYRAPEIL 171
+ HRDL N+LV + +KI DFGLA+ E K V +W IL
Sbjct: 136 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 195
Query: 172 LQSELYSSKADMWAMGAIMAELFTF 196
+Y+ ++D+W+ G + EL TF
Sbjct: 196 --HRIYTHQSDVWSYGVTVWELMTF 218
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 96/205 (46%), Gaps = 16/205 (7%)
Query: 3 KYSGFKELGRGAFGRVFQAFDEHTGEAV----AIKELKQRYASWEDCLNLREVKCLRKLN 58
++ K LG GAFG V++ GE V AIKEL++ + + L E + ++
Sbjct: 41 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 100
Query: 59 HSNIVKLKELIQNNNRLYLVFECME--CNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSY 116
+ ++ +L + + + L+ + M C L + +D + W Q+ +G++Y
Sbjct: 101 NPHVCRLLGICLTST-VQLITQLMPFGCLLDYVREHKDN--IGSQYLLNWCVQIAKGMNY 157
Query: 117 MHQNGFFHRDLKPENLLV-SQGIIKIADFGLAR----EIKSGPPYTNYVGSRWYRAPEIL 171
+ HRDL N+LV + +KI DFGLA+ E K V +W IL
Sbjct: 158 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 217
Query: 172 LQSELYSSKADMWAMGAIMAELFTF 196
+Y+ ++D+W+ G + EL TF
Sbjct: 218 --HRIYTHQSDVWSYGVTVWELMTF 240
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 102/218 (46%), Gaps = 27/218 (12%)
Query: 2 DKYSGFKELGRGAFGRVFQAF-----DEHTGEAVAIKELKQRYASWEDCLNLREVKCLRK 56
+K + +ELG+G+FG V++ + VAIK + + + E L E +++
Sbjct: 10 EKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKE 69
Query: 57 LNHSNIVKLKELIQNNNRLYLVFECM-----ECNLYQLMAARDRKLFSEPEIKAWLFQ-- 109
N ++V+L ++ ++ E M + L L + P + + Q
Sbjct: 70 FNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMA 129
Query: 110 --VFQGLSYMHQNGFFHRDLKPENLLVSQGI-IKIADFGLAREI-------KSGPPYTNY 159
+ G++Y++ N F HRDL N +V++ +KI DFG+ R+I K G
Sbjct: 130 GEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGG---KGL 186
Query: 160 VGSRWYRAPEILLQSELYSSKADMWAMGAIMAELFTFC 197
+ RW +PE L+ ++++ +D+W+ G ++ E+ T
Sbjct: 187 LPVRWM-SPES-LKDGVFTTYSDVWSFGVVLWEIATLA 222
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 93/200 (46%), Gaps = 14/200 (7%)
Query: 7 FKELGRGAFGRVFQAFDEHTGEAV----AIKELKQRYASWEDCLNLREVKCLRKLNHSNI 62
K LG GAFG V++ GE V AIK L + + + E + ++H ++
Sbjct: 43 VKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHL 102
Query: 63 VKLKELIQNNNRLYLVFECME--CNLYQLMAARDRKLFSEPEIKAWLFQVFQGLSYMHQN 120
V+L + + + LV + M C L + +D + W Q+ +G+ Y+ +
Sbjct: 103 VRLLGVCLSPT-IQLVTQLMPHGCLLEYVHEHKDN--IGSQLLLNWCVQIAKGMMYLEER 159
Query: 121 GFFHRDLKPENLLV-SQGIIKIADFGLAREIKSGPPYTNYVGSRW---YRAPEILLQSEL 176
HRDL N+LV S +KI DFGLAR ++ N G + + A E +
Sbjct: 160 RLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALEC-IHYRK 218
Query: 177 YSSKADMWAMGAIMAELFTF 196
++ ++D+W+ G + EL TF
Sbjct: 219 FTHQSDVWSYGVTIWELMTF 238
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.321 0.135 0.415
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,238,548
Number of Sequences: 62578
Number of extensions: 420444
Number of successful extensions: 5423
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 975
Number of HSP's successfully gapped in prelim test: 138
Number of HSP's that attempted gapping in prelim test: 898
Number of HSP's gapped (non-prelim): 1285
length of query: 417
length of database: 14,973,337
effective HSP length: 101
effective length of query: 316
effective length of database: 8,652,959
effective search space: 2734335044
effective search space used: 2734335044
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 53 (25.0 bits)