Query 044609
Match_columns 232
No_of_seqs 173 out of 1902
Neff 10.9
Searched_HMMs 29240
Date Mon Mar 25 08:22:06 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/044609.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/044609hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3rp8_A Flavoprotein monooxygen 100.0 5.6E-33 1.9E-37 223.6 25.9 223 4-230 22-247 (407)
2 2x3n_A Probable FAD-dependent 100.0 3.5E-29 1.2E-33 201.0 22.2 215 1-227 2-228 (399)
3 2vou_A 2,6-dihydroxypyridine h 100.0 3E-28 1E-32 195.4 26.4 203 1-219 1-211 (397)
4 3alj_A 2-methyl-3-hydroxypyrid 100.0 3.6E-28 1.2E-32 193.9 24.2 210 4-228 10-229 (379)
5 2qa2_A CABE, polyketide oxygen 100.0 7E-28 2.4E-32 198.0 26.4 209 4-227 11-225 (499)
6 2qa1_A PGAE, polyketide oxygen 100.0 8.9E-28 3.1E-32 197.5 25.7 209 4-227 10-224 (500)
7 2xdo_A TETX2 protein; tetracyc 100.0 2.1E-27 7.2E-32 190.5 24.6 216 4-229 25-251 (398)
8 3nix_A Flavoprotein/dehydrogen 100.0 4.8E-27 1.6E-31 189.8 25.9 222 1-227 1-233 (421)
9 1pn0_A Phenol 2-monooxygenase; 100.0 4.8E-27 1.6E-31 198.8 24.8 223 5-229 8-295 (665)
10 3ihg_A RDME; flavoenzyme, anth 100.0 1.8E-27 6.2E-32 197.6 21.4 220 1-222 1-243 (535)
11 3c96_A Flavin-containing monoo 100.0 6.8E-27 2.3E-31 188.3 23.2 206 4-218 3-223 (410)
12 3fmw_A Oxygenase; mithramycin, 100.0 1.5E-27 5.2E-32 198.5 16.5 211 4-227 48-268 (570)
13 3e1t_A Halogenase; flavoprotei 100.0 5.4E-26 1.9E-30 187.7 25.6 223 3-228 5-237 (512)
14 2r0c_A REBC; flavin adenine di 100.0 8.5E-26 2.9E-30 187.8 26.0 213 4-221 25-257 (549)
15 3oz2_A Digeranylgeranylglycero 100.0 2.6E-26 9E-31 183.7 21.7 215 3-227 2-227 (397)
16 1k0i_A P-hydroxybenzoate hydro 99.9 1.8E-26 6E-31 185.0 18.8 215 5-228 2-226 (394)
17 2dkh_A 3-hydroxybenzoate hydro 99.9 1E-25 3.6E-30 190.2 24.0 221 5-228 32-275 (639)
18 3i3l_A Alkylhalidase CMLS; fla 99.9 2E-25 6.9E-30 186.2 25.1 221 3-227 21-252 (591)
19 4hb9_A Similarities with proba 99.9 2.2E-26 7.5E-31 185.2 18.3 181 7-191 3-192 (412)
20 3cgv_A Geranylgeranyl reductas 99.9 3.6E-25 1.2E-29 177.3 21.3 215 3-229 2-229 (397)
21 3atr_A Conserved archaeal prot 99.9 2.3E-24 8E-29 175.5 18.6 209 4-228 5-234 (453)
22 2pyx_A Tryptophan halogenase; 99.9 1E-21 3.4E-26 162.8 25.8 216 1-220 3-293 (526)
23 2weu_A Tryptophan 5-halogenase 99.9 2.2E-21 7.5E-26 160.3 23.9 219 5-228 2-296 (511)
24 2gmh_A Electron transfer flavo 99.9 1E-20 3.6E-25 158.1 25.9 160 4-172 34-223 (584)
25 2aqj_A Tryptophan halogenase, 99.9 6.8E-21 2.3E-25 158.2 23.2 222 1-227 1-288 (538)
26 2e4g_A Tryptophan halogenase; 99.9 1.6E-20 5.5E-25 156.2 24.3 222 1-227 21-318 (550)
27 3c4a_A Probable tryptophan hyd 99.8 1.1E-20 3.7E-25 150.7 9.7 190 6-223 1-201 (381)
28 2bry_A NEDD9 interacting prote 99.8 1.5E-18 5E-23 142.7 13.5 146 4-179 91-243 (497)
29 3dme_A Conserved exported prot 99.8 7.9E-17 2.7E-21 127.5 19.8 71 102-175 144-220 (369)
30 1yvv_A Amine oxidase, flavin-c 99.8 1.4E-16 4.8E-21 124.7 20.3 189 5-213 2-213 (336)
31 2oln_A NIKD protein; flavoprot 99.8 1.2E-16 4.1E-21 128.0 19.9 173 1-179 1-222 (397)
32 2gag_B Heterotetrameric sarcos 99.8 2.1E-17 7.3E-22 132.6 15.2 117 102-227 168-287 (405)
33 3dje_A Fructosyl amine: oxygen 99.8 8.3E-18 2.8E-22 136.4 12.2 62 103-167 156-222 (438)
34 1y56_B Sarcosine oxidase; dehy 99.7 5.1E-17 1.8E-21 129.4 15.5 74 102-180 143-222 (382)
35 3v76_A Flavoprotein; structura 99.7 4.1E-17 1.4E-21 131.0 14.2 153 1-175 23-207 (417)
36 3da1_A Glycerol-3-phosphate de 99.7 1.5E-17 5.1E-22 138.5 12.0 172 1-175 14-242 (561)
37 3nyc_A D-arginine dehydrogenas 99.7 3.3E-17 1.1E-21 130.4 12.9 69 102-175 148-219 (381)
38 2gf3_A MSOX, monomeric sarcosi 99.7 3.6E-16 1.2E-20 124.8 18.5 170 4-178 2-218 (389)
39 3c4n_A Uncharacterized protein 99.7 7.7E-17 2.6E-21 129.4 12.1 169 4-177 35-249 (405)
40 1ryi_A Glycine oxidase; flavop 99.7 2.1E-16 7.2E-21 125.8 14.5 110 103-224 159-271 (382)
41 2i0z_A NAD(FAD)-utilizing dehy 99.7 2.8E-16 9.5E-21 127.7 14.1 164 3-175 24-211 (447)
42 3ps9_A TRNA 5-methylaminomethy 99.7 4.3E-16 1.5E-20 132.7 15.7 163 6-174 273-482 (676)
43 2uzz_A N-methyl-L-tryptophan o 99.7 5.1E-16 1.7E-20 123.2 14.8 158 5-167 2-205 (372)
44 3pvc_A TRNA 5-methylaminomethy 99.7 5.3E-16 1.8E-20 132.3 15.4 70 101-174 405-478 (689)
45 2qcu_A Aerobic glycerol-3-phos 99.7 1.2E-15 4.2E-20 125.6 16.7 112 103-223 144-268 (501)
46 3nlc_A Uncharacterized protein 99.7 6.7E-16 2.3E-20 127.4 14.4 140 5-175 107-290 (549)
47 1rp0_A ARA6, thiazole biosynth 99.7 6.9E-16 2.4E-20 118.1 12.0 133 4-170 38-195 (284)
48 3ihm_A Styrene monooxygenase A 99.7 1.5E-15 5.1E-20 122.8 13.8 146 4-171 21-172 (430)
49 2gqf_A Hypothetical protein HI 99.6 1.3E-15 4.6E-20 121.8 12.2 141 4-166 3-168 (401)
50 2zbw_A Thioredoxin reductase; 99.6 8.6E-16 2.9E-20 120.2 10.4 123 1-170 1-125 (335)
51 3axb_A Putative oxidoreductase 99.6 1E-15 3.4E-20 124.5 10.8 75 102-180 175-269 (448)
52 2cul_A Glucose-inhibited divis 99.6 1.6E-15 5.4E-20 112.7 10.5 130 3-174 1-133 (232)
53 4a9w_A Monooxygenase; baeyer-v 99.6 9.5E-16 3.2E-20 120.7 9.4 129 4-167 2-133 (357)
54 1pj5_A N,N-dimethylglycine oxi 99.6 2.3E-15 7.9E-20 130.9 12.3 78 102-183 145-225 (830)
55 1qo8_A Flavocytochrome C3 fuma 99.6 6E-15 2.1E-19 123.2 13.6 157 4-172 120-318 (566)
56 3ces_A MNMG, tRNA uridine 5-ca 99.6 2E-15 6.9E-20 125.8 10.6 152 4-172 27-187 (651)
57 2ywl_A Thioredoxin reductase r 99.6 1E-14 3.5E-19 104.1 12.7 116 6-175 2-119 (180)
58 3jsk_A Cypbp37 protein; octame 99.6 3.4E-15 1.2E-19 115.7 10.9 134 4-168 78-253 (344)
59 2rgh_A Alpha-glycerophosphate 99.6 7.4E-15 2.5E-19 122.6 13.5 68 104-174 184-259 (571)
60 3ab1_A Ferredoxin--NADP reduct 99.6 2.4E-15 8.2E-20 118.9 9.9 122 4-171 13-136 (360)
61 1y0p_A Fumarate reductase flav 99.6 1.7E-14 5.9E-19 120.6 14.8 153 4-170 125-321 (571)
62 2zxi_A TRNA uridine 5-carboxym 99.6 5.3E-15 1.8E-19 122.8 11.3 149 4-169 26-183 (637)
63 3cp8_A TRNA uridine 5-carboxym 99.6 5.6E-15 1.9E-19 123.0 11.1 148 4-168 20-176 (641)
64 4fk1_A Putative thioredoxin re 99.6 2.7E-14 9.3E-19 110.3 13.1 112 3-166 4-117 (304)
65 3gwf_A Cyclohexanone monooxyge 99.6 2.2E-14 7.5E-19 118.8 13.1 135 4-167 7-148 (540)
66 3i6d_A Protoporphyrinogen oxid 99.6 5.3E-14 1.8E-18 114.9 13.7 55 109-167 236-290 (470)
67 2gv8_A Monooxygenase; FMO, FAD 99.6 1.5E-14 5.1E-19 117.6 9.7 153 4-167 5-178 (447)
68 4at0_A 3-ketosteroid-delta4-5a 99.5 4.8E-14 1.7E-18 116.3 11.6 38 4-41 40-77 (510)
69 1vdc_A NTR, NADPH dependent th 99.5 1.3E-14 4.5E-19 113.4 7.5 120 2-168 5-126 (333)
70 4ap3_A Steroid monooxygenase; 99.5 1.4E-14 4.8E-19 120.2 8.0 134 4-166 20-159 (549)
71 3uox_A Otemo; baeyer-villiger 99.5 6.9E-14 2.4E-18 116.0 11.6 137 3-167 7-148 (545)
72 1w4x_A Phenylacetone monooxyge 99.5 8.8E-14 3E-18 115.6 12.1 135 4-167 15-155 (542)
73 2gjc_A Thiazole biosynthetic e 99.5 1.3E-13 4.3E-18 106.4 12.1 136 5-172 65-245 (326)
74 3lzw_A Ferredoxin--NADP reduct 99.5 5.2E-14 1.8E-18 109.7 9.5 115 5-166 7-123 (332)
75 3fbs_A Oxidoreductase; structu 99.5 9.5E-14 3.2E-18 106.6 10.8 110 5-168 2-114 (297)
76 3f8d_A Thioredoxin reductase ( 99.5 1.8E-13 6.2E-18 106.2 12.1 111 4-167 14-126 (323)
77 3itj_A Thioredoxin reductase 1 99.5 1E-13 3.4E-18 108.4 10.7 118 4-167 21-143 (338)
78 1kf6_A Fumarate reductase flav 99.5 2.5E-13 8.7E-18 113.8 13.4 161 1-172 1-203 (602)
79 2q0l_A TRXR, thioredoxin reduc 99.5 2.2E-13 7.5E-18 105.4 11.6 112 6-168 2-116 (311)
80 3qj4_A Renalase; FAD/NAD(P)-bi 99.5 5.5E-13 1.9E-17 104.6 13.4 143 6-165 2-164 (342)
81 1trb_A Thioredoxin reductase; 99.5 3.6E-13 1.2E-17 104.6 10.8 115 1-167 1-117 (320)
82 2bs2_A Quinol-fumarate reducta 99.5 2.8E-13 9.7E-18 114.4 10.7 40 1-40 1-40 (660)
83 1c0p_A D-amino acid oxidase; a 99.5 4.3E-13 1.5E-17 106.0 11.1 38 3-40 4-41 (363)
84 2q7v_A Thioredoxin reductase; 99.5 6.4E-13 2.2E-17 103.5 11.8 114 4-167 7-124 (325)
85 4dgk_A Phytoene dehydrogenase; 99.5 2.3E-13 7.7E-18 112.1 9.8 62 109-173 222-285 (501)
86 2xve_A Flavin-containing monoo 99.5 1.8E-13 6.2E-18 111.6 9.0 146 6-167 3-167 (464)
87 4gcm_A TRXR, thioredoxin reduc 99.4 7.6E-13 2.6E-17 102.5 11.7 38 1-38 2-39 (312)
88 1fl2_A Alkyl hydroperoxide red 99.4 8.1E-13 2.8E-17 102.2 11.8 114 5-167 1-116 (310)
89 3d1c_A Flavin-containing putat 99.4 4E-13 1.4E-17 106.4 10.1 135 3-166 2-143 (369)
90 1chu_A Protein (L-aspartate ox 99.4 3.9E-13 1.3E-17 111.5 9.8 37 4-41 7-43 (540)
91 3cty_A Thioredoxin reductase; 99.4 9.8E-13 3.4E-17 102.1 11.5 111 4-167 15-127 (319)
92 1d4d_A Flavocytochrome C fumar 99.4 1E-12 3.5E-17 109.8 12.3 156 4-172 125-323 (572)
93 2wdq_A Succinate dehydrogenase 99.4 5.2E-12 1.8E-16 105.7 16.0 37 4-40 6-42 (588)
94 4a5l_A Thioredoxin reductase; 99.4 2.2E-12 7.5E-17 99.9 12.6 119 1-166 1-121 (314)
95 2h88_A Succinate dehydrogenase 99.4 1.6E-12 5.5E-17 109.1 11.9 157 4-168 17-219 (621)
96 2a87_A TRXR, TR, thioredoxin r 99.4 1.4E-12 4.6E-17 102.1 10.6 112 4-167 13-127 (335)
97 3s5w_A L-ornithine 5-monooxyge 99.4 2.5E-12 8.5E-17 104.9 12.3 151 5-168 30-194 (463)
98 3ka7_A Oxidoreductase; structu 99.4 3.9E-13 1.3E-17 108.4 6.8 59 109-172 197-257 (425)
99 2ivd_A PPO, PPOX, protoporphyr 99.4 5.6E-12 1.9E-16 103.2 13.7 62 5-66 16-92 (478)
100 3lov_A Protoporphyrinogen oxid 99.4 4E-12 1.4E-16 104.0 12.7 54 109-167 237-290 (475)
101 1hyu_A AHPF, alkyl hydroperoxi 99.4 4.8E-12 1.7E-16 104.6 12.6 115 4-167 211-327 (521)
102 1s3e_A Amine oxidase [flavin-c 99.4 1.1E-11 3.9E-16 102.5 14.5 54 109-167 216-269 (520)
103 1rsg_A FMS1 protein; FAD bindi 99.4 7.2E-12 2.4E-16 103.6 13.3 57 107-166 201-257 (516)
104 3o0h_A Glutathione reductase; 99.4 2.9E-12 9.9E-17 105.1 10.1 45 120-168 246-290 (484)
105 3nrn_A Uncharacterized protein 99.4 4.5E-12 1.5E-16 102.2 11.1 58 109-173 190-249 (421)
106 2e5v_A L-aspartate oxidase; ar 99.3 1.1E-11 3.7E-16 101.3 12.1 31 7-37 1-31 (472)
107 4gde_A UDP-galactopyranose mut 99.3 1.2E-11 4.1E-16 102.1 12.0 52 108-165 222-275 (513)
108 3kkj_A Amine oxidase, flavin-c 99.3 2.1E-12 7.2E-17 98.0 6.5 38 4-41 1-38 (336)
109 3nks_A Protoporphyrinogen oxid 99.3 1.6E-11 5.4E-16 100.5 12.0 36 6-41 3-40 (477)
110 2vvm_A Monoamine oxidase N; FA 99.3 2.2E-11 7.5E-16 100.2 12.7 60 6-65 40-114 (495)
111 3k7m_X 6-hydroxy-L-nicotine ox 99.3 1.1E-12 3.8E-17 106.0 4.8 36 6-41 2-37 (431)
112 2yg5_A Putrescine oxidase; oxi 99.3 6.8E-11 2.3E-15 96.1 15.0 41 1-41 1-41 (453)
113 2a8x_A Dihydrolipoyl dehydroge 99.3 1.6E-12 5.4E-17 106.2 3.9 143 5-170 3-150 (464)
114 3r9u_A Thioredoxin reductase; 99.3 5E-11 1.7E-15 92.1 11.7 112 4-166 3-118 (315)
115 1jnr_A Adenylylsulfate reducta 99.3 4.3E-11 1.5E-15 101.2 11.8 37 4-40 21-61 (643)
116 1v59_A Dihydrolipoamide dehydr 99.3 1.8E-11 6.1E-16 100.3 9.0 37 4-40 4-40 (478)
117 1q1r_A Putidaredoxin reductase 99.2 2.5E-11 8.7E-16 98.1 9.6 114 1-168 1-116 (431)
118 3g3e_A D-amino-acid oxidase; F 99.2 2.8E-12 9.5E-17 101.0 3.7 34 7-40 2-41 (351)
119 3l8k_A Dihydrolipoyl dehydroge 99.2 4.4E-11 1.5E-15 97.7 10.7 40 1-41 1-40 (466)
120 4dna_A Probable glutathione re 99.2 1.9E-11 6.6E-16 99.7 8.3 37 1-37 1-37 (463)
121 3gyx_A Adenylylsulfate reducta 99.2 1.7E-11 5.7E-16 103.6 8.1 37 4-40 21-63 (662)
122 3sx6_A Sulfide-quinone reducta 99.2 6E-12 2E-16 102.0 4.8 113 1-170 1-116 (437)
123 1ojt_A Surface protein; redox- 99.2 1.9E-11 6.4E-16 100.3 7.5 37 4-40 5-41 (482)
124 1dxl_A Dihydrolipoamide dehydr 99.2 1.8E-11 6E-16 100.1 6.9 38 4-41 5-42 (470)
125 3kd9_A Coenzyme A disulfide re 99.2 3.7E-11 1.3E-15 97.7 8.6 109 5-166 3-114 (449)
126 3lxd_A FAD-dependent pyridine 99.2 1.8E-11 6E-16 98.6 6.3 110 4-166 8-119 (415)
127 2jae_A L-amino acid oxidase; o 99.2 2.5E-10 8.4E-15 93.8 12.0 54 108-165 239-295 (489)
128 3iwa_A FAD-dependent pyridine 99.2 9.2E-11 3.2E-15 95.9 9.0 36 5-40 3-40 (472)
129 4gut_A Lysine-specific histone 99.2 1.4E-10 4.8E-15 99.6 10.1 51 108-165 534-584 (776)
130 3p1w_A Rabgdi protein; GDI RAB 99.2 3.9E-10 1.3E-14 91.5 12.0 55 109-165 257-313 (475)
131 3urh_A Dihydrolipoyl dehydroge 99.1 4.8E-11 1.7E-15 98.0 6.6 38 3-40 23-60 (491)
132 3ef6_A Toluene 1,2-dioxygenase 99.1 1.2E-10 4.2E-15 93.5 8.3 107 6-166 3-111 (410)
133 3oc4_A Oxidoreductase, pyridin 99.1 6.9E-11 2.4E-15 96.1 6.2 111 6-167 3-116 (452)
134 3klj_A NAD(FAD)-dependent dehy 99.1 3.3E-10 1.1E-14 90.2 9.9 108 5-166 9-116 (385)
135 1zmd_A Dihydrolipoyl dehydroge 99.1 1E-10 3.4E-15 95.8 6.8 38 3-40 4-41 (474)
136 2qae_A Lipoamide, dihydrolipoy 99.1 2.1E-10 7.3E-15 93.6 8.7 36 5-40 2-37 (468)
137 1ebd_A E3BD, dihydrolipoamide 99.1 2.4E-10 8.1E-15 93.1 8.9 34 4-37 2-35 (455)
138 2gqw_A Ferredoxin reductase; f 99.1 3.4E-10 1.1E-14 90.9 9.6 108 4-168 6-115 (408)
139 3h8l_A NADH oxidase; membrane 99.1 8.9E-11 3E-15 94.3 6.2 32 7-38 3-37 (409)
140 2bc0_A NADH oxidase; flavoprot 99.1 6.3E-11 2.2E-15 97.3 5.0 113 4-167 34-150 (490)
141 4b63_A L-ornithine N5 monooxyg 99.1 2.8E-11 9.4E-16 99.6 2.6 65 104-168 141-216 (501)
142 2yqu_A 2-oxoglutarate dehydrog 99.1 1.1E-10 3.7E-15 95.1 5.4 36 5-40 1-36 (455)
143 3h28_A Sulfide-quinone reducta 99.1 4.4E-11 1.5E-15 96.7 2.9 105 6-166 3-109 (430)
144 3ics_A Coenzyme A-disulfide re 99.0 6E-10 2E-14 93.5 9.1 114 4-167 35-153 (588)
145 3cgb_A Pyridine nucleotide-dis 99.0 7E-10 2.4E-14 90.9 9.3 112 6-167 37-153 (480)
146 1y56_A Hypothetical protein PH 99.0 4E-10 1.4E-14 92.5 7.4 110 4-167 107-220 (493)
147 3lad_A Dihydrolipoamide dehydr 99.0 1.5E-10 5.3E-15 94.7 4.9 37 4-40 2-38 (476)
148 3hyw_A Sulfide-quinone reducta 99.0 8.9E-10 3E-14 89.0 9.2 104 6-165 3-108 (430)
149 1zk7_A HGII, reductase, mercur 99.0 1.9E-09 6.3E-14 88.1 11.0 36 1-37 1-36 (467)
150 1xhc_A NADH oxidase /nitrite r 99.0 1.2E-09 4E-14 86.5 9.1 105 6-166 9-113 (367)
151 3fg2_P Putative rubredoxin red 99.0 2E-10 6.9E-15 92.1 4.8 107 6-166 2-110 (404)
152 1xdi_A RV3303C-LPDA; reductase 99.0 6.7E-10 2.3E-14 91.4 7.7 34 5-38 2-38 (499)
153 2cdu_A NADPH oxidase; flavoenz 99.0 2.5E-10 8.5E-15 92.9 4.8 113 6-167 1-118 (452)
154 3qfa_A Thioredoxin reductase 1 99.0 3.3E-09 1.1E-13 87.7 11.5 35 4-38 31-65 (519)
155 2v3a_A Rubredoxin reductase; a 99.0 3.1E-09 1.1E-13 84.6 10.9 101 5-168 145-245 (384)
156 1nhp_A NADH peroxidase; oxidor 99.0 2E-09 6.9E-14 87.4 9.8 111 6-167 1-116 (447)
157 2yqu_A 2-oxoglutarate dehydrog 99.0 7.3E-09 2.5E-13 84.3 13.0 99 6-168 168-266 (455)
158 3fpz_A Thiazole biosynthetic e 99.0 8.1E-10 2.8E-14 86.0 6.4 37 5-41 65-103 (326)
159 2v3a_A Rubredoxin reductase; a 99.0 9.4E-10 3.2E-14 87.6 6.9 37 1-38 1-39 (384)
160 1m6i_A Programmed cell death p 99.0 2.1E-09 7.2E-14 88.3 8.7 132 4-166 10-144 (493)
161 3dgz_A Thioredoxin reductase 2 98.9 3.5E-09 1.2E-13 86.9 9.5 36 3-38 4-39 (488)
162 3dgh_A TRXR-1, thioredoxin red 98.9 6.1E-09 2.1E-13 85.4 10.5 34 4-37 8-41 (483)
163 3ntd_A FAD-dependent pyridine 98.9 5.7E-09 2E-13 87.2 9.8 111 7-167 3-118 (565)
164 1ges_A Glutathione reductase; 98.9 1.9E-08 6.4E-13 81.8 12.5 100 6-168 168-267 (450)
165 3vrd_B FCCB subunit, flavocyto 98.9 1.5E-08 5.2E-13 81.0 11.5 105 6-167 3-109 (401)
166 2eq6_A Pyruvate dehydrogenase 98.9 9.7E-09 3.3E-13 83.7 10.5 99 6-168 170-273 (464)
167 1mo9_A ORF3; nucleotide bindin 98.9 8.7E-09 3E-13 85.3 9.9 37 4-40 42-78 (523)
168 1fec_A Trypanothione reductase 98.9 7.7E-09 2.6E-13 84.9 9.3 33 4-36 2-35 (490)
169 2bcg_G Secretory pathway GDP d 98.9 3.2E-09 1.1E-13 86.4 6.2 39 5-43 11-49 (453)
170 2b9w_A Putative aminooxidase; 98.8 4.5E-09 1.6E-13 84.6 6.1 41 1-41 1-43 (424)
171 1nhp_A NADH peroxidase; oxidor 98.8 2.7E-08 9.2E-13 80.8 10.4 99 5-167 149-247 (447)
172 2r9z_A Glutathione amide reduc 98.8 5.3E-08 1.8E-12 79.4 12.1 99 6-168 167-266 (463)
173 1sez_A Protoporphyrinogen oxid 98.8 1.1E-08 3.7E-13 84.3 8.0 61 5-65 13-88 (504)
174 1v0j_A UDP-galactopyranose mut 98.8 5.4E-09 1.8E-13 83.6 5.6 36 5-40 7-43 (399)
175 4b1b_A TRXR, thioredoxin reduc 98.8 2.8E-08 9.7E-13 82.2 10.0 35 5-39 42-76 (542)
176 2hqm_A GR, grase, glutathione 98.8 9.9E-08 3.4E-12 78.1 12.4 101 6-168 186-287 (479)
177 3lxd_A FAD-dependent pyridine 98.8 1.3E-07 4.3E-12 76.0 12.9 101 5-167 152-252 (415)
178 2gag_A Heterotetrameric sarcos 98.8 4.1E-08 1.4E-12 86.7 10.4 37 5-41 128-164 (965)
179 3ic9_A Dihydrolipoamide dehydr 98.8 5.9E-09 2E-13 85.6 4.7 38 1-38 4-41 (492)
180 4eqs_A Coenzyme A disulfide re 98.7 4.6E-08 1.6E-12 79.2 9.7 111 6-166 1-116 (437)
181 1onf_A GR, grase, glutathione 98.7 1.3E-07 4.4E-12 77.9 12.6 100 6-168 177-277 (500)
182 3ef6_A Toluene 1,2-dioxygenase 98.7 4.1E-08 1.4E-12 78.8 9.3 99 6-167 144-242 (410)
183 3fg2_P Putative rubredoxin red 98.7 1.1E-07 3.7E-12 76.2 11.7 100 6-167 143-242 (404)
184 1ebd_A E3BD, dihydrolipoamide 98.7 7.8E-08 2.7E-12 78.2 11.1 100 5-168 170-272 (455)
185 3hdq_A UDP-galactopyranose mut 98.7 1.3E-08 4.4E-13 81.0 6.2 37 4-40 28-64 (397)
186 1v59_A Dihydrolipoamide dehydr 98.7 6.2E-08 2.1E-12 79.3 10.1 101 6-168 184-289 (478)
187 2e1m_A L-glutamate oxidase; L- 98.7 1.6E-08 5.6E-13 79.7 6.3 37 4-40 43-80 (376)
188 1fec_A Trypanothione reductase 98.7 1.4E-07 4.8E-12 77.4 12.0 100 6-168 188-290 (490)
189 2wpf_A Trypanothione reductase 98.7 1.5E-07 5.2E-12 77.3 12.1 100 6-168 192-294 (495)
190 1q1r_A Putidaredoxin reductase 98.7 1.2E-07 3.9E-12 76.7 11.1 100 6-167 150-251 (431)
191 4g6h_A Rotenone-insensitive NA 98.7 8E-08 2.7E-12 79.0 9.6 34 5-38 42-75 (502)
192 1xdi_A RV3303C-LPDA; reductase 98.7 2.4E-07 8.4E-12 76.2 12.3 99 6-168 183-281 (499)
193 4dsg_A UDP-galactopyranose mut 98.7 2.6E-08 9E-13 81.6 6.2 38 4-41 8-46 (484)
194 2bi7_A UDP-galactopyranose mut 98.7 2.9E-08 9.9E-13 78.9 6.2 37 5-41 3-39 (384)
195 3dk9_A Grase, GR, glutathione 98.7 1.9E-08 6.4E-13 82.4 5.2 35 4-38 19-53 (478)
196 1ojt_A Surface protein; redox- 98.7 1.2E-07 4.2E-12 77.6 9.8 99 6-168 186-288 (482)
197 2eq6_A Pyruvate dehydrogenase 98.6 2.6E-08 8.8E-13 81.3 5.3 38 1-38 1-39 (464)
198 1zmd_A Dihydrolipoyl dehydroge 98.6 4.2E-07 1.4E-11 74.3 12.2 100 6-167 179-283 (474)
199 3ntd_A FAD-dependent pyridine 98.6 3.8E-07 1.3E-11 76.2 12.2 100 6-167 152-268 (565)
200 1mo9_A ORF3; nucleotide bindin 98.6 3.2E-07 1.1E-11 75.9 11.5 102 6-168 215-318 (523)
201 3iwa_A FAD-dependent pyridine 98.6 2.6E-07 8.8E-12 75.5 10.8 106 6-174 160-268 (472)
202 1d5t_A Guanine nucleotide diss 98.6 5.3E-08 1.8E-12 78.7 6.6 39 4-42 5-43 (433)
203 2iid_A L-amino-acid oxidase; f 98.6 7.3E-08 2.5E-12 79.2 7.4 38 5-42 33-70 (498)
204 1i8t_A UDP-galactopyranose mut 98.6 3.7E-08 1.3E-12 77.9 5.4 36 6-41 2-37 (367)
205 2qae_A Lipoamide, dihydrolipoy 98.6 4.3E-07 1.5E-11 74.1 11.8 99 6-168 175-278 (468)
206 2a8x_A Dihydrolipoyl dehydroge 98.6 3.7E-07 1.3E-11 74.4 11.3 98 6-167 172-272 (464)
207 2r9z_A Glutathione amide reduc 98.6 3.9E-08 1.3E-12 80.1 5.5 37 1-38 1-37 (463)
208 1ges_A Glutathione reductase; 98.6 3.5E-08 1.2E-12 80.2 5.1 35 4-38 3-37 (450)
209 1onf_A GR, grase, glutathione 98.6 4.4E-08 1.5E-12 80.6 5.4 34 5-38 2-35 (500)
210 2hqm_A GR, grase, glutathione 98.6 4.5E-08 1.5E-12 80.2 5.2 35 4-38 10-44 (479)
211 2cdu_A NADPH oxidase; flavoenz 98.6 4.6E-07 1.6E-11 73.6 11.1 99 6-167 150-248 (452)
212 1lvl_A Dihydrolipoamide dehydr 98.6 2.2E-07 7.5E-12 75.6 9.0 97 6-168 172-270 (458)
213 2gqw_A Ferredoxin reductase; f 98.6 7E-07 2.4E-11 71.6 11.7 95 6-167 146-240 (408)
214 1dxl_A Dihydrolipoamide dehydr 98.6 3.2E-07 1.1E-11 74.9 9.5 100 5-168 177-281 (470)
215 2bc0_A NADH oxidase; flavoprot 98.6 8.9E-07 3E-11 72.7 12.1 99 5-167 194-292 (490)
216 3oc4_A Oxidoreductase, pyridin 98.5 7.6E-07 2.6E-11 72.3 11.5 98 6-167 148-245 (452)
217 3cgb_A Pyridine nucleotide-dis 98.5 3.8E-07 1.3E-11 74.7 9.8 98 5-167 186-283 (480)
218 1zk7_A HGII, reductase, mercur 98.5 6.8E-07 2.3E-11 72.9 11.1 97 6-168 177-273 (467)
219 4b1b_A TRXR, thioredoxin reduc 98.5 1E-06 3.4E-11 73.0 11.8 99 5-168 223-321 (542)
220 3ic9_A Dihydrolipoamide dehydr 98.5 1.2E-06 4.2E-11 71.9 12.2 97 6-167 175-275 (492)
221 3pl8_A Pyranose 2-oxidase; sub 98.5 8.8E-08 3E-12 80.7 5.5 38 4-41 45-82 (623)
222 3lad_A Dihydrolipoamide dehydr 98.5 1.5E-06 5.2E-11 71.0 12.7 100 5-168 180-282 (476)
223 3g5s_A Methylenetetrahydrofola 98.5 1.2E-07 3.9E-12 74.6 5.6 34 6-39 2-35 (443)
224 1trb_A Thioredoxin reductase; 98.5 9.1E-07 3.1E-11 68.3 10.8 97 6-167 146-248 (320)
225 2vdc_G Glutamate synthase [NAD 98.5 9E-08 3.1E-12 77.7 5.0 36 5-40 122-157 (456)
226 3itj_A Thioredoxin reductase 1 98.5 1E-06 3.5E-11 68.4 10.6 94 6-167 174-272 (338)
227 3urh_A Dihydrolipoyl dehydroge 98.5 9.5E-07 3.2E-11 72.5 10.8 99 6-168 199-302 (491)
228 1xhc_A NADH oxidase /nitrite r 98.5 3.4E-07 1.2E-11 72.3 7.7 92 6-167 144-235 (367)
229 3ics_A Coenzyme A-disulfide re 98.5 9.3E-07 3.2E-11 74.2 10.6 96 6-167 188-283 (588)
230 1lvl_A Dihydrolipoamide dehydr 98.5 9.9E-08 3.4E-12 77.7 4.6 35 3-37 3-37 (458)
231 4eqs_A Coenzyme A disulfide re 98.5 1.4E-06 4.9E-11 70.4 11.3 94 6-167 148-241 (437)
232 1m6i_A Programmed cell death p 98.5 8.9E-07 3.1E-11 72.7 10.1 106 6-174 181-292 (493)
233 2wpf_A Trypanothione reductase 98.5 1.2E-07 4.1E-12 77.9 4.5 33 4-36 6-39 (495)
234 3k30_A Histamine dehydrogenase 98.4 1.5E-07 5.1E-12 80.4 5.0 36 5-40 391-426 (690)
235 3dk9_A Grase, GR, glutathione 98.4 2.9E-06 9.9E-11 69.4 12.4 100 6-167 188-294 (478)
236 2q0l_A TRXR, thioredoxin reduc 98.4 3.2E-06 1.1E-10 65.0 11.9 94 6-167 144-242 (311)
237 1kdg_A CDH, cellobiose dehydro 98.4 2.2E-07 7.4E-12 77.3 5.5 37 4-40 6-42 (546)
238 3s5w_A L-ornithine 5-monooxyge 98.4 1.2E-06 4E-11 71.4 9.6 135 5-167 227-378 (463)
239 3t37_A Probable dehydrogenase; 98.4 1.7E-07 5.8E-12 77.6 4.4 36 4-39 16-52 (526)
240 1b37_A Protein (polyamine oxid 98.4 4.1E-07 1.4E-11 74.3 6.3 56 108-167 206-271 (472)
241 3l8k_A Dihydrolipoyl dehydroge 98.4 2.9E-06 9.9E-11 69.2 11.1 98 6-168 173-274 (466)
242 3dgh_A TRXR-1, thioredoxin red 98.4 4E-06 1.4E-10 68.7 11.9 98 6-167 188-290 (483)
243 2x8g_A Thioredoxin glutathione 98.4 3E-07 1E-11 77.3 5.0 34 4-37 106-139 (598)
244 1o94_A Tmadh, trimethylamine d 98.4 4.2E-07 1.4E-11 78.1 5.9 36 5-40 389-424 (729)
245 1lqt_A FPRA; NADP+ derivative, 98.4 2.6E-07 8.8E-12 75.1 4.3 37 4-40 2-45 (456)
246 3cty_A Thioredoxin reductase; 98.4 5.2E-06 1.8E-10 64.1 11.5 93 6-167 156-253 (319)
247 1ju2_A HydroxynitrIle lyase; f 98.4 2.1E-07 7E-12 77.2 3.6 36 4-40 25-60 (536)
248 3d1c_A Flavin-containing putat 98.3 2E-06 6.8E-11 67.8 9.1 105 6-167 167-273 (369)
249 1gpe_A Protein (glucose oxidas 98.3 5.4E-07 1.9E-11 75.5 5.7 40 1-40 20-60 (587)
250 2q7v_A Thioredoxin reductase; 98.3 8.6E-06 3E-10 63.0 11.9 93 6-167 153-250 (325)
251 3dgz_A Thioredoxin reductase 2 98.3 9.8E-06 3.4E-10 66.4 12.6 98 6-167 186-288 (488)
252 1ps9_A 2,4-dienoyl-COA reducta 98.3 7.1E-07 2.4E-11 76.1 6.0 36 5-40 373-408 (671)
253 2z3y_A Lysine-specific histone 98.3 6.5E-07 2.2E-11 76.1 5.6 37 5-41 107-143 (662)
254 3q9t_A Choline dehydrogenase a 98.3 5E-07 1.7E-11 75.4 4.7 36 4-39 5-41 (577)
255 3r9u_A Thioredoxin reductase; 98.3 7.7E-06 2.6E-10 62.8 11.1 94 6-166 148-244 (315)
256 2zbw_A Thioredoxin reductase; 98.3 5.4E-06 1.9E-10 64.4 10.3 96 6-167 153-253 (335)
257 3kd9_A Coenzyme A disulfide re 98.3 4.4E-06 1.5E-10 67.7 10.0 97 6-167 149-245 (449)
258 3ab1_A Ferredoxin--NADP reduct 98.3 1.3E-06 4.4E-11 68.7 6.7 97 6-167 164-264 (360)
259 2xag_A Lysine-specific histone 98.3 8.2E-07 2.8E-11 77.1 5.9 37 5-41 278-314 (852)
260 1fl2_A Alkyl hydroperoxide red 98.3 9.9E-06 3.4E-10 62.2 11.4 94 6-167 145-243 (310)
261 2jbv_A Choline oxidase; alcoho 98.3 7.2E-07 2.5E-11 74.1 4.9 40 1-40 9-49 (546)
262 3qvp_A Glucose oxidase; oxidor 98.2 8.1E-07 2.8E-11 74.1 4.7 35 4-38 18-53 (583)
263 1vdc_A NTR, NADPH dependent th 98.2 1.4E-05 4.6E-10 62.0 11.3 95 6-167 160-260 (333)
264 1n4w_A CHOD, cholesterol oxida 98.2 1.2E-06 4E-11 72.2 5.3 37 3-39 3-39 (504)
265 1gte_A Dihydropyrimidine dehyd 98.2 1.2E-06 4E-11 78.0 5.6 36 5-40 187-223 (1025)
266 3f8d_A Thioredoxin reductase ( 98.2 1.5E-05 5.2E-10 61.3 11.1 93 6-167 155-252 (323)
267 1vg0_A RAB proteins geranylger 98.2 3.4E-06 1.2E-10 70.7 7.4 56 4-60 7-62 (650)
268 1cjc_A Protein (adrenodoxin re 98.2 1.5E-06 5.2E-11 70.7 4.7 37 4-40 5-43 (460)
269 3fim_B ARYL-alcohol oxidase; A 98.2 8E-07 2.7E-11 74.0 3.0 36 5-40 2-38 (566)
270 1coy_A Cholesterol oxidase; ox 98.2 2E-06 7E-11 70.8 5.3 36 4-39 10-45 (507)
271 3uox_A Otemo; baeyer-villiger 98.1 8.5E-06 2.9E-10 67.7 8.7 35 6-40 186-220 (545)
272 3gwf_A Cyclohexanone monooxyge 98.1 1.7E-05 5.9E-10 65.8 10.5 35 6-40 179-213 (540)
273 3ayj_A Pro-enzyme of L-phenyla 98.1 1.6E-06 5.3E-11 73.7 3.3 36 5-40 56-100 (721)
274 3qfa_A Thioredoxin reductase 1 98.1 5.9E-05 2E-09 62.3 12.6 101 6-167 211-316 (519)
275 2a87_A TRXR, TR, thioredoxin r 98.1 2.1E-05 7.3E-10 61.1 9.5 95 6-167 156-253 (335)
276 2x8g_A Thioredoxin glutathione 98.1 4.7E-05 1.6E-09 64.0 12.0 32 6-37 287-318 (598)
277 4g6h_A Rotenone-insensitive NA 98.1 1.7E-05 6E-10 65.2 9.2 51 109-165 277-331 (502)
278 3lzw_A Ferredoxin--NADP reduct 98.0 2.5E-05 8.7E-10 60.3 8.7 92 6-167 155-251 (332)
279 3k30_A Histamine dehydrogenase 98.0 4E-05 1.4E-09 65.6 10.3 97 6-167 524-625 (690)
280 2gv8_A Monooxygenase; FMO, FAD 98.0 2.4E-05 8.1E-10 63.4 8.3 34 6-39 213-247 (447)
281 3fbs_A Oxidoreductase; structu 97.9 6.6E-05 2.3E-09 57.0 9.9 85 6-166 142-226 (297)
282 1hyu_A AHPF, alkyl hydroperoxi 97.9 9.9E-05 3.4E-09 61.0 11.4 94 6-167 356-454 (521)
283 4ap3_A Steroid monooxygenase; 97.8 2.2E-05 7.5E-10 65.3 5.8 35 6-40 192-226 (549)
284 2xve_A Flavin-containing monoo 97.8 0.0001 3.4E-09 60.1 9.4 34 6-39 198-231 (464)
285 4a5l_A Thioredoxin reductase; 97.7 0.00028 9.6E-09 54.1 10.3 34 6-39 153-186 (314)
286 1o94_A Tmadh, trimethylamine d 97.7 0.0001 3.5E-09 63.4 7.8 33 6-38 529-563 (729)
287 2gag_A Heterotetrameric sarcos 97.7 0.00014 4.7E-09 64.5 8.4 91 6-167 285-384 (965)
288 1cjc_A Protein (adrenodoxin re 97.6 0.0003 1E-08 57.2 9.4 35 6-40 146-201 (460)
289 1id1_A Putative potassium chan 97.5 0.00014 4.9E-09 49.7 5.6 34 5-38 3-36 (153)
290 3llv_A Exopolyphosphatase-rela 97.5 9.7E-05 3.3E-09 49.8 4.7 33 6-38 7-39 (141)
291 3klj_A NAD(FAD)-dependent dehy 97.5 7.9E-05 2.7E-09 59.2 4.7 36 6-41 147-182 (385)
292 3fwz_A Inner membrane protein 97.5 0.00012 4.3E-09 49.3 5.0 35 5-39 7-41 (140)
293 2g1u_A Hypothetical protein TM 97.5 0.00015 5E-09 49.8 5.2 34 6-39 20-53 (155)
294 1lqt_A FPRA; NADP+ derivative, 97.5 0.00036 1.2E-08 56.6 7.8 35 6-40 148-203 (456)
295 1ps9_A 2,4-dienoyl-COA reducta 97.5 0.00059 2E-08 58.2 9.4 50 109-167 578-629 (671)
296 1lss_A TRK system potassium up 97.4 0.0002 6.7E-09 48.0 5.1 33 6-38 5-37 (140)
297 3ic5_A Putative saccharopine d 97.4 0.00021 7.3E-09 46.2 4.9 35 4-38 4-39 (118)
298 2hmt_A YUAA protein; RCK, KTN, 97.4 0.00023 7.7E-09 47.9 4.8 33 6-38 7-39 (144)
299 1gte_A Dihydropyrimidine dehyd 97.3 0.0018 6.2E-08 57.9 11.3 33 6-38 333-366 (1025)
300 3k96_A Glycerol-3-phosphate de 97.3 0.00025 8.7E-09 55.6 5.1 38 1-38 25-62 (356)
301 4a9w_A Monooxygenase; baeyer-v 97.3 0.0004 1.4E-08 54.0 6.2 32 6-38 164-195 (357)
302 3ado_A Lambda-crystallin; L-gu 97.3 0.00022 7.4E-09 54.9 4.4 34 6-39 7-40 (319)
303 3sx6_A Sulfide-quinone reducta 97.3 0.001 3.6E-08 53.6 8.5 49 108-164 212-267 (437)
304 3tl2_A Malate dehydrogenase; c 97.3 0.00034 1.2E-08 53.8 5.3 38 1-38 4-42 (315)
305 1f0y_A HCDH, L-3-hydroxyacyl-C 97.3 0.00036 1.2E-08 53.4 5.3 34 6-39 16-49 (302)
306 2dpo_A L-gulonate 3-dehydrogen 97.3 0.00033 1.1E-08 54.0 5.0 34 6-39 7-40 (319)
307 1pzg_A LDH, lactate dehydrogen 97.2 0.00038 1.3E-08 54.0 5.0 36 4-39 8-44 (331)
308 4gcm_A TRXR, thioredoxin reduc 97.2 0.00036 1.2E-08 53.5 4.8 35 6-40 146-180 (312)
309 3i83_A 2-dehydropantoate 2-red 97.2 0.00045 1.5E-08 53.4 5.1 33 6-38 3-35 (320)
310 3ghy_A Ketopantoate reductase 97.2 0.00052 1.8E-08 53.4 5.2 35 1-37 1-35 (335)
311 3mog_A Probable 3-hydroxybutyr 97.1 0.00052 1.8E-08 56.0 5.2 39 1-39 1-39 (483)
312 3h28_A Sulfide-quinone reducta 97.1 0.0016 5.5E-08 52.3 7.9 51 107-165 203-255 (430)
313 3h8l_A NADH oxidase; membrane 97.1 0.0036 1.2E-07 49.9 9.8 47 110-166 224-270 (409)
314 4b63_A L-ornithine N5 monooxyg 97.1 0.0063 2.2E-07 50.0 11.4 35 6-40 247-283 (501)
315 3hn2_A 2-dehydropantoate 2-red 97.1 0.00052 1.8E-08 52.8 4.5 33 6-38 3-35 (312)
316 3c85_A Putative glutathione-re 97.1 0.0007 2.4E-08 47.7 4.8 33 6-38 40-73 (183)
317 4e12_A Diketoreductase; oxidor 97.0 0.00082 2.8E-08 50.9 5.2 34 6-39 5-38 (283)
318 2ewd_A Lactate dehydrogenase,; 97.0 0.00071 2.4E-08 52.2 4.9 38 1-39 1-39 (317)
319 3lk7_A UDP-N-acetylmuramoylala 97.0 0.00079 2.7E-08 54.6 5.3 34 5-38 9-42 (451)
320 1w4x_A Phenylacetone monooxyge 97.0 0.002 6.7E-08 53.5 7.7 35 6-40 187-221 (542)
321 3l4b_C TRKA K+ channel protien 97.0 0.00058 2E-08 49.6 3.9 33 7-39 2-34 (218)
322 3g17_A Similar to 2-dehydropan 97.0 0.00071 2.4E-08 51.6 4.3 33 6-38 3-35 (294)
323 3g0o_A 3-hydroxyisobutyrate de 96.9 0.0011 3.7E-08 50.8 5.0 34 5-38 7-40 (303)
324 1y6j_A L-lactate dehydrogenase 96.9 0.0011 3.8E-08 51.1 5.0 36 4-39 6-43 (318)
325 3gg2_A Sugar dehydrogenase, UD 96.9 0.0011 3.9E-08 53.6 5.0 34 6-39 3-36 (450)
326 3pqe_A L-LDH, L-lactate dehydr 96.9 0.0011 3.8E-08 51.2 4.6 38 1-38 1-40 (326)
327 2qyt_A 2-dehydropantoate 2-red 96.8 0.00075 2.5E-08 51.9 3.6 36 1-36 4-45 (317)
328 2raf_A Putative dinucleotide-b 96.8 0.0017 5.7E-08 46.9 5.2 34 6-39 20-53 (209)
329 4g65_A TRK system potassium up 96.8 0.00047 1.6E-08 56.0 2.5 35 5-39 3-37 (461)
330 2ew2_A 2-dehydropantoate 2-red 96.8 0.0013 4.5E-08 50.4 4.9 32 7-38 5-36 (316)
331 1ks9_A KPA reductase;, 2-dehyd 96.8 0.0016 5.3E-08 49.4 5.3 33 7-39 2-34 (291)
332 2hjr_A Malate dehydrogenase; m 96.8 0.0016 5.6E-08 50.4 5.4 34 6-39 15-49 (328)
333 3qha_A Putative oxidoreductase 96.8 0.00098 3.4E-08 50.9 4.1 36 5-40 15-50 (296)
334 1z82_A Glycerol-3-phosphate de 96.8 0.0014 4.9E-08 50.8 5.0 35 4-38 13-47 (335)
335 1zej_A HBD-9, 3-hydroxyacyl-CO 96.8 0.0015 5E-08 49.7 4.8 34 5-39 12-45 (293)
336 3ggo_A Prephenate dehydrogenas 96.8 0.0019 6.5E-08 49.7 5.5 35 4-38 32-68 (314)
337 3dfz_A SIRC, precorrin-2 dehyd 96.8 0.0013 4.6E-08 47.8 4.3 33 5-37 31-63 (223)
338 4fk1_A Putative thioredoxin re 96.8 0.015 5E-07 44.3 10.4 33 6-38 147-180 (304)
339 4ezb_A Uncharacterized conserv 96.8 0.00088 3E-08 51.7 3.5 34 5-38 24-58 (317)
340 1lld_A L-lactate dehydrogenase 96.8 0.0017 5.7E-08 50.1 5.0 33 6-38 8-42 (319)
341 1evy_A Glycerol-3-phosphate de 96.7 0.00085 2.9E-08 52.8 3.3 32 7-38 17-48 (366)
342 3l6d_A Putative oxidoreductase 96.7 0.0022 7.6E-08 49.1 5.4 34 6-39 10-43 (306)
343 1bg6_A N-(1-D-carboxylethyl)-L 96.7 0.0019 6.4E-08 50.6 5.0 33 6-38 5-37 (359)
344 2uyy_A N-PAC protein; long-cha 96.7 0.0023 7.8E-08 49.2 5.4 34 6-39 31-64 (316)
345 2y0c_A BCEC, UDP-glucose dehyd 96.7 0.0018 6.2E-08 52.8 5.0 34 6-39 9-42 (478)
346 3ego_A Probable 2-dehydropanto 96.7 0.0019 6.4E-08 49.6 4.8 32 6-38 3-34 (307)
347 1t2d_A LDH-P, L-lactate dehydr 96.7 0.0027 9.2E-08 49.0 5.4 34 6-39 5-39 (322)
348 4huj_A Uncharacterized protein 96.7 0.0011 3.7E-08 48.3 3.1 34 6-39 24-58 (220)
349 3g79_A NDP-N-acetyl-D-galactos 96.6 0.002 7E-08 52.3 4.9 34 6-39 19-54 (478)
350 3dtt_A NADP oxidoreductase; st 96.6 0.0028 9.6E-08 46.9 5.2 35 5-39 19-53 (245)
351 4a7p_A UDP-glucose dehydrogena 96.6 0.0026 8.8E-08 51.4 5.2 35 6-40 9-43 (446)
352 2x5o_A UDP-N-acetylmuramoylala 96.6 0.002 6.9E-08 52.0 4.7 36 5-40 5-40 (439)
353 3gvi_A Malate dehydrogenase; N 96.6 0.0029 1E-07 48.8 5.3 34 6-39 8-42 (324)
354 3k6j_A Protein F01G10.3, confi 96.6 0.0027 9.2E-08 51.3 5.2 34 6-39 55-88 (460)
355 1kyq_A Met8P, siroheme biosynt 96.5 0.0013 4.4E-08 49.4 2.9 34 5-38 13-46 (274)
356 1zcj_A Peroxisomal bifunctiona 96.5 0.0028 9.5E-08 51.5 5.1 34 6-39 38-71 (463)
357 3l9w_A Glutathione-regulated p 96.5 0.0026 8.8E-08 50.9 4.7 35 5-39 4-38 (413)
358 4dio_A NAD(P) transhydrogenase 96.5 0.0033 1.1E-07 49.8 5.1 34 6-39 191-224 (405)
359 3p7m_A Malate dehydrogenase; p 96.5 0.0038 1.3E-07 48.1 5.4 34 6-39 6-40 (321)
360 2v6b_A L-LDH, L-lactate dehydr 96.5 0.0032 1.1E-07 48.2 5.0 32 7-38 2-35 (304)
361 1ur5_A Malate dehydrogenase; o 96.5 0.0036 1.2E-07 48.0 5.2 33 6-38 3-36 (309)
362 3qsg_A NAD-binding phosphogluc 96.5 0.0025 8.5E-08 49.0 4.2 33 6-38 25-58 (312)
363 1jw9_B Molybdopterin biosynthe 96.5 0.0027 9.1E-08 47.2 4.2 33 6-38 32-65 (249)
364 3gpi_A NAD-dependent epimerase 96.5 0.0046 1.6E-07 46.6 5.6 37 1-39 1-37 (286)
365 2zyd_A 6-phosphogluconate dehy 96.5 0.0033 1.1E-07 51.3 5.0 36 4-39 14-49 (480)
366 3tri_A Pyrroline-5-carboxylate 96.5 0.0044 1.5E-07 46.9 5.4 34 6-39 4-40 (280)
367 3ktd_A Prephenate dehydrogenas 96.4 0.004 1.4E-07 48.4 5.1 33 6-38 9-41 (341)
368 3c24_A Putative oxidoreductase 96.4 0.0046 1.6E-07 46.8 5.4 33 6-38 12-45 (286)
369 3dfu_A Uncharacterized protein 96.4 0.00094 3.2E-08 48.8 1.4 38 1-38 2-39 (232)
370 2p4q_A 6-phosphogluconate dehy 96.4 0.004 1.4E-07 51.0 5.3 36 4-39 9-44 (497)
371 3pef_A 6-phosphogluconate dehy 96.4 0.0037 1.3E-07 47.3 4.8 34 7-40 3-36 (287)
372 3doj_A AT3G25530, dehydrogenas 96.4 0.0045 1.5E-07 47.5 5.2 34 6-39 22-55 (310)
373 3hwr_A 2-dehydropantoate 2-red 96.4 0.0041 1.4E-07 47.9 5.0 32 6-38 20-51 (318)
374 1y56_A Hypothetical protein PH 96.4 0.013 4.5E-07 48.0 8.1 58 112-175 265-324 (493)
375 4gbj_A 6-phosphogluconate dehy 96.3 0.0028 9.5E-08 48.4 3.8 37 4-40 4-40 (297)
376 3pid_A UDP-glucose 6-dehydroge 96.3 0.004 1.4E-07 49.9 4.8 33 6-39 37-69 (432)
377 4e21_A 6-phosphogluconate dehy 96.3 0.0046 1.6E-07 48.4 5.0 34 6-39 23-56 (358)
378 2rcy_A Pyrroline carboxylate r 96.3 0.0041 1.4E-07 46.4 4.6 35 6-40 5-43 (262)
379 1ldn_A L-lactate dehydrogenase 96.3 0.0044 1.5E-07 47.7 4.8 38 1-38 1-41 (316)
380 3oj0_A Glutr, glutamyl-tRNA re 96.3 0.0016 5.5E-08 43.9 2.1 33 6-38 22-54 (144)
381 1guz_A Malate dehydrogenase; o 96.3 0.0051 1.8E-07 47.2 5.1 33 7-39 2-36 (310)
382 2izz_A Pyrroline-5-carboxylate 96.3 0.0047 1.6E-07 47.7 4.9 34 6-39 23-60 (322)
383 1mv8_A GMD, GDP-mannose 6-dehy 96.3 0.0037 1.3E-07 50.4 4.4 32 7-38 2-33 (436)
384 1vpd_A Tartronate semialdehyde 96.3 0.0041 1.4E-07 47.3 4.4 34 6-39 6-39 (299)
385 3d0o_A L-LDH 1, L-lactate dehy 96.3 0.0043 1.5E-07 47.8 4.5 35 4-38 5-41 (317)
386 2vns_A Metalloreductase steap3 96.3 0.0065 2.2E-07 43.9 5.2 33 6-38 29-61 (215)
387 2pv7_A T-protein [includes: ch 96.3 0.0065 2.2E-07 46.3 5.4 34 6-39 22-56 (298)
388 4gwg_A 6-phosphogluconate dehy 96.3 0.0059 2E-07 49.8 5.4 34 6-39 5-38 (484)
389 1x0v_A GPD-C, GPDH-C, glycerol 96.3 0.0025 8.5E-08 49.8 3.1 34 6-39 9-49 (354)
390 4dna_A Probable glutathione re 96.2 0.0083 2.8E-07 48.7 6.2 36 5-40 170-205 (463)
391 3p2y_A Alanine dehydrogenase/p 96.2 0.0039 1.3E-07 49.0 4.0 34 6-39 185-218 (381)
392 3pdu_A 3-hydroxyisobutyrate de 96.2 0.0036 1.2E-07 47.4 3.8 34 7-40 3-36 (287)
393 3cky_A 2-hydroxymethyl glutara 96.2 0.005 1.7E-07 46.9 4.6 38 1-39 1-38 (301)
394 3vtf_A UDP-glucose 6-dehydroge 96.2 0.0047 1.6E-07 49.6 4.4 34 6-39 22-55 (444)
395 4dll_A 2-hydroxy-3-oxopropiona 96.2 0.0058 2E-07 47.1 4.7 34 6-39 32-65 (320)
396 1txg_A Glycerol-3-phosphate de 96.1 0.0049 1.7E-07 47.7 4.2 30 7-36 2-31 (335)
397 2q3e_A UDP-glucose 6-dehydroge 96.1 0.0046 1.6E-07 50.3 4.1 34 6-39 6-41 (467)
398 4ffl_A PYLC; amino acid, biosy 96.1 0.0086 2.9E-07 46.9 5.6 33 7-39 3-35 (363)
399 3gt0_A Pyrroline-5-carboxylate 96.1 0.0083 2.8E-07 44.4 5.2 34 6-39 3-40 (247)
400 3eag_A UDP-N-acetylmuramate:L- 96.1 0.0082 2.8E-07 46.4 5.2 34 6-39 5-39 (326)
401 4gx0_A TRKA domain protein; me 96.1 0.011 3.6E-07 49.4 6.1 58 6-63 349-407 (565)
402 1a5z_A L-lactate dehydrogenase 96.0 0.0059 2E-07 47.0 4.3 32 7-38 2-35 (319)
403 2iz1_A 6-phosphogluconate dehy 96.0 0.0086 2.9E-07 48.8 5.3 33 6-38 6-38 (474)
404 2h78_A Hibadh, 3-hydroxyisobut 96.0 0.0066 2.2E-07 46.3 4.4 33 7-39 5-37 (302)
405 3h8v_A Ubiquitin-like modifier 96.0 0.0068 2.3E-07 45.9 4.4 35 5-39 36-71 (292)
406 1x13_A NAD(P) transhydrogenase 96.0 0.0072 2.4E-07 48.1 4.7 34 6-39 173-206 (401)
407 1yj8_A Glycerol-3-phosphate de 96.0 0.0058 2E-07 48.2 4.1 33 7-39 23-62 (375)
408 1l7d_A Nicotinamide nucleotide 96.0 0.0087 3E-07 47.4 5.1 34 6-39 173-206 (384)
409 3rui_A Ubiquitin-like modifier 96.0 0.0085 2.9E-07 46.3 4.8 34 5-38 34-68 (340)
410 1jay_A Coenzyme F420H2:NADP+ o 96.0 0.0099 3.4E-07 42.7 4.9 32 7-38 2-34 (212)
411 2f1k_A Prephenate dehydrogenas 96.0 0.0093 3.2E-07 44.9 4.9 32 7-38 2-33 (279)
412 2a9f_A Putative malic enzyme ( 95.9 0.008 2.7E-07 47.2 4.5 34 5-38 188-222 (398)
413 1pjc_A Protein (L-alanine dehy 95.9 0.0096 3.3E-07 46.7 5.0 33 6-38 168-200 (361)
414 2pgd_A 6-phosphogluconate dehy 95.9 0.01 3.4E-07 48.5 5.3 34 6-39 3-36 (482)
415 1b8p_A Protein (malate dehydro 95.9 0.0068 2.3E-07 46.9 4.1 37 1-37 1-45 (329)
416 1dlj_A UDP-glucose dehydrogena 95.9 0.0065 2.2E-07 48.4 4.1 31 7-38 2-32 (402)
417 1oju_A MDH, malate dehydrogena 95.9 0.0076 2.6E-07 45.8 4.2 32 7-38 2-35 (294)
418 2vdc_G Glutamate synthase [NAD 95.9 0.011 3.6E-07 48.0 5.3 35 6-40 265-300 (456)
419 2wtb_A MFP2, fatty acid multif 95.9 0.0081 2.8E-07 51.6 4.8 34 6-39 313-346 (725)
420 1nyt_A Shikimate 5-dehydrogena 95.9 0.013 4.5E-07 44.0 5.5 34 5-38 119-152 (271)
421 3phh_A Shikimate dehydrogenase 95.9 0.013 4.5E-07 43.9 5.2 34 6-39 119-152 (269)
422 3nep_X Malate dehydrogenase; h 95.9 0.0092 3.1E-07 45.8 4.5 33 7-39 2-36 (314)
423 3b1f_A Putative prephenate deh 95.8 0.0083 2.8E-07 45.5 4.3 33 6-38 7-41 (290)
424 3o0h_A Glutathione reductase; 95.8 0.014 4.9E-07 47.6 5.9 35 6-40 192-226 (484)
425 2gf2_A Hibadh, 3-hydroxyisobut 95.8 0.0099 3.4E-07 45.1 4.6 33 7-39 2-34 (296)
426 1zud_1 Adenylyltransferase THI 95.8 0.0091 3.1E-07 44.3 4.3 34 5-38 28-62 (251)
427 1hyh_A L-hicdh, L-2-hydroxyiso 95.8 0.0085 2.9E-07 45.9 4.2 32 7-38 3-36 (309)
428 3c7a_A Octopine dehydrogenase; 95.8 0.0062 2.1E-07 48.5 3.6 29 7-35 4-33 (404)
429 3vku_A L-LDH, L-lactate dehydr 95.8 0.0099 3.4E-07 45.9 4.5 33 6-38 10-44 (326)
430 1pjq_A CYSG, siroheme synthase 95.8 0.011 3.6E-07 48.0 4.9 34 5-38 12-45 (457)
431 2o3j_A UDP-glucose 6-dehydroge 95.8 0.0072 2.5E-07 49.4 3.9 34 6-39 10-45 (481)
432 2g5c_A Prephenate dehydrogenas 95.8 0.013 4.6E-07 44.1 5.2 32 7-38 3-36 (281)
433 1vl6_A Malate oxidoreductase; 95.8 0.011 3.9E-07 46.3 4.7 34 4-37 191-225 (388)
434 1yqg_A Pyrroline-5-carboxylate 95.8 0.0097 3.3E-07 44.3 4.3 32 7-38 2-34 (263)
435 2i6t_A Ubiquitin-conjugating e 95.8 0.0095 3.2E-07 45.5 4.2 34 6-39 15-50 (303)
436 3orq_A N5-carboxyaminoimidazol 95.7 0.018 6.1E-07 45.4 5.9 35 5-39 12-46 (377)
437 3dhn_A NAD-dependent epimerase 95.7 0.0099 3.4E-07 43.1 4.1 38 1-39 1-39 (227)
438 2aef_A Calcium-gated potassium 95.7 0.0044 1.5E-07 45.4 2.2 34 5-39 9-42 (234)
439 3ldh_A Lactate dehydrogenase; 95.7 0.012 4.1E-07 45.4 4.6 33 6-38 22-56 (330)
440 3d1l_A Putative NADP oxidoredu 95.7 0.012 4E-07 44.0 4.5 33 6-38 11-44 (266)
441 2eez_A Alanine dehydrogenase; 95.7 0.014 4.7E-07 46.0 5.0 33 6-38 167-199 (369)
442 3fi9_A Malate dehydrogenase; s 95.7 0.016 5.4E-07 45.1 5.2 33 6-38 9-44 (343)
443 1b37_A Protein (polyamine oxid 95.7 0.036 1.2E-06 45.0 7.6 38 4-41 3-41 (472)
444 1pgj_A 6PGDH, 6-PGDH, 6-phosph 95.7 0.014 4.7E-07 47.7 5.1 32 7-38 3-34 (478)
445 2egg_A AROE, shikimate 5-dehyd 95.7 0.017 5.8E-07 44.0 5.3 34 5-38 141-175 (297)
446 3ojo_A CAP5O; rossmann fold, c 95.7 0.011 3.7E-07 47.5 4.3 34 6-39 12-45 (431)
447 1ez4_A Lactate dehydrogenase; 95.7 0.012 4.1E-07 45.3 4.4 34 5-38 5-40 (318)
448 4aj2_A L-lactate dehydrogenase 95.6 0.016 5.6E-07 44.7 5.2 33 6-38 20-54 (331)
449 1hdo_A Biliverdin IX beta redu 95.6 0.018 6.2E-07 40.8 5.2 34 6-39 4-38 (206)
450 3q2o_A Phosphoribosylaminoimid 95.6 0.02 7E-07 45.3 5.9 34 6-39 15-48 (389)
451 3ius_A Uncharacterized conserv 95.6 0.012 4E-07 44.4 4.3 34 6-39 6-39 (286)
452 4e4t_A Phosphoribosylaminoimid 95.6 0.019 6.5E-07 46.0 5.7 36 4-39 34-69 (419)
453 3ond_A Adenosylhomocysteinase; 95.6 0.018 6E-07 46.8 5.5 34 5-38 265-298 (488)
454 1wdk_A Fatty oxidation complex 95.6 0.01 3.4E-07 50.9 4.3 34 6-39 315-348 (715)
455 2cvz_A Dehydrogenase, 3-hydrox 95.6 0.012 4E-07 44.5 4.3 32 7-39 3-34 (289)
456 1np3_A Ketol-acid reductoisome 95.6 0.018 6.2E-07 44.7 5.3 34 6-39 17-50 (338)
457 2vhw_A Alanine dehydrogenase; 95.5 0.017 5.7E-07 45.7 5.0 34 5-38 168-201 (377)
458 3h5n_A MCCB protein; ubiquitin 95.5 0.013 4.5E-07 45.8 4.3 35 5-39 118-153 (353)
459 3e8x_A Putative NAD-dependent 95.5 0.02 6.8E-07 41.8 5.0 35 5-39 21-56 (236)
460 1p77_A Shikimate 5-dehydrogena 95.4 0.018 6E-07 43.3 4.6 33 6-38 120-152 (272)
461 2d4a_B Malate dehydrogenase; a 95.4 0.018 6.1E-07 44.1 4.5 33 7-39 1-34 (308)
462 1i36_A Conserved hypothetical 95.3 0.017 5.8E-07 43.0 4.3 30 7-36 2-31 (264)
463 3don_A Shikimate dehydrogenase 95.3 0.019 6.6E-07 43.2 4.5 35 5-39 117-152 (277)
464 3u62_A Shikimate dehydrogenase 95.3 0.026 8.8E-07 41.9 5.1 32 7-38 110-142 (253)
465 2hk9_A Shikimate dehydrogenase 95.3 0.018 6E-07 43.4 4.3 33 6-38 130-162 (275)
466 3zwc_A Peroxisomal bifunctiona 95.3 0.018 6.2E-07 49.5 4.7 34 6-39 317-350 (742)
467 4gsl_A Ubiquitin-like modifier 95.3 0.022 7.4E-07 47.5 5.0 35 5-39 326-361 (615)
468 3d4o_A Dipicolinate synthase s 95.3 0.029 1E-06 42.6 5.5 34 5-38 155-188 (293)
469 2rir_A Dipicolinate synthase, 95.3 0.031 1.1E-06 42.6 5.6 34 5-38 157-190 (300)
470 3vh1_A Ubiquitin-like modifier 95.2 0.021 7.3E-07 47.4 4.7 33 6-38 328-361 (598)
471 3ew7_A LMO0794 protein; Q8Y8U8 95.1 0.032 1.1E-06 40.0 5.2 32 7-38 2-34 (221)
472 1kjq_A GART 2, phosphoribosylg 95.1 0.033 1.1E-06 44.0 5.6 39 1-39 7-45 (391)
473 3r6d_A NAD-dependent epimerase 95.1 0.041 1.4E-06 39.6 5.7 34 6-39 6-41 (221)
474 3ruf_A WBGU; rossmann fold, UD 95.1 0.019 6.5E-07 44.5 4.1 36 4-39 24-60 (351)
475 2d5c_A AROE, shikimate 5-dehyd 95.1 0.03 1E-06 41.8 5.0 32 7-38 118-149 (263)
476 2ahr_A Putative pyrroline carb 95.1 0.023 7.8E-07 42.2 4.3 33 6-38 4-36 (259)
477 3vps_A TUNA, NAD-dependent epi 95.1 0.032 1.1E-06 42.5 5.2 35 5-39 7-42 (321)
478 2zqz_A L-LDH, L-lactate dehydr 95.1 0.025 8.7E-07 43.6 4.6 34 5-38 9-44 (326)
479 3tnl_A Shikimate dehydrogenase 95.0 0.035 1.2E-06 42.6 5.3 34 5-38 154-188 (315)
480 2yjz_A Metalloreductase steap4 94.0 0.0039 1.3E-07 44.6 0.0 34 6-39 20-53 (201)
481 3jyo_A Quinate/shikimate dehyd 95.0 0.038 1.3E-06 41.7 5.4 34 5-38 127-161 (283)
482 2bcg_G Secretory pathway GDP d 95.0 0.018 6.2E-07 46.6 3.8 56 108-167 242-301 (453)
483 1tt5_B Ubiquitin-activating en 95.0 0.028 9.5E-07 45.2 4.8 34 5-38 40-74 (434)
484 2a35_A Hypothetical protein PA 95.0 0.026 9E-07 40.3 4.3 40 1-40 1-43 (215)
485 2dbq_A Glyoxylate reductase; D 95.0 0.045 1.5E-06 42.4 5.8 34 6-39 151-184 (334)
486 1yb4_A Tartronic semialdehyde 95.0 0.017 5.9E-07 43.7 3.4 32 7-39 5-36 (295)
487 2r6j_A Eugenol synthase 1; phe 95.0 0.033 1.1E-06 42.6 5.0 34 6-39 12-46 (318)
488 3o8q_A Shikimate 5-dehydrogena 94.9 0.044 1.5E-06 41.3 5.5 34 5-38 126-160 (281)
489 1y8q_A Ubiquitin-like 1 activa 94.9 0.025 8.7E-07 44.0 4.3 34 5-38 36-70 (346)
490 3h2s_A Putative NADH-flavin re 94.9 0.039 1.3E-06 39.7 5.1 32 7-38 2-34 (224)
491 1mld_A Malate dehydrogenase; o 94.9 0.028 9.6E-07 43.2 4.5 32 7-38 2-36 (314)
492 1nvt_A Shikimate 5'-dehydrogen 94.9 0.029 9.8E-07 42.5 4.5 32 6-38 129-160 (287)
493 2fwm_X 2,3-dihydro-2,3-dihydro 94.9 0.056 1.9E-06 39.9 5.9 40 1-40 3-43 (250)
494 3d3w_A L-xylulose reductase; u 94.9 0.05 1.7E-06 39.8 5.6 34 5-38 7-41 (244)
495 3gvp_A Adenosylhomocysteinase 94.9 0.028 9.6E-07 44.8 4.4 33 6-38 221-253 (435)
496 1lu9_A Methylene tetrahydromet 94.9 0.047 1.6E-06 41.3 5.5 34 5-38 119-153 (287)
497 2x0j_A Malate dehydrogenase; o 94.9 0.028 9.6E-07 42.6 4.2 32 7-38 2-35 (294)
498 1xgk_A Nitrogen metabolite rep 94.8 0.048 1.6E-06 42.5 5.7 39 1-39 1-40 (352)
499 3obb_A Probable 3-hydroxyisobu 94.8 0.033 1.1E-06 42.5 4.6 33 7-39 5-37 (300)
500 2pd4_A Enoyl-[acyl-carrier-pro 94.8 0.041 1.4E-06 41.2 5.1 39 1-39 1-43 (275)
No 1
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=100.00 E-value=5.6e-33 Score=223.58 Aligned_cols=223 Identities=26% Similarity=0.459 Sum_probs=178.3
Q ss_pred ccccEEEECCCHHHHHHHHHHHhCCCcEEEEecCCCCcCcceeeeecccHHHHHHHcCChHHHHhhccCceeeEEEEcCC
Q 044609 4 VEEDVVIIGAGIAGLATAVALRRLGIKALVLEKSDGLRATGAALTLSPNAWLALDALGVSHKLTSVYAPAKRVFVTNLGT 83 (232)
Q Consensus 4 ~~~dV~IvG~G~~G~~~A~~L~~~g~~v~viE~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~ 83 (232)
.++||+||||||+|+++|+.|+++|++|+||||.+.+...++++.+++++.+.|+++|+++.+.....+.....++....
T Consensus 22 ~~~dV~IVGaG~aGl~~A~~La~~G~~V~v~E~~~~~~~~~~~~~l~~~~~~~l~~lg~~~~~~~~~~~~~~~~~~~~~~ 101 (407)
T 3rp8_A 22 GHMKAIVIGAGIGGLSAAVALKQSGIDCDVYEAVKEIKPVGAAISVWPNGVKCMAHLGMGDIMETFGGPLRRMAYRDFRS 101 (407)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSCC----CEEEECHHHHHHHHHTTCHHHHHHHSCCCCEEEEEETTT
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCCCCcCeeEEECHHHHHHHHHCCCHHHHHhhcCCCcceEEEECCC
Confidence 34899999999999999999999999999999999888788999999999999999999999988888888877777553
Q ss_pred Cce-eEEeccCCCCCCCCceeeeehHHHHHHHhhhCCCCeEEeCceEEEEEecCCCCCccEEEEeCCCcEEEccEEEecC
Q 044609 84 GAT-QELSYAGKSGRIGSGLRSVHRQSLLEALADELPDDTIQFSSKIAAIDSQTLNGSSAAIINLGDSTIIKAKVLIGCD 162 (232)
Q Consensus 84 ~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~i~~~~~v~~i~~~~~~g~~~~~v~~~~g~~~~a~~vV~A~ 162 (232)
+.. ..+++......+....+.++|..|.+.|.+.++.++++++++|++++.++ .. +.|++.+|+++.||+||+||
T Consensus 102 g~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~i~~~~---~~-v~v~~~~g~~~~a~~vV~Ad 177 (407)
T 3rp8_A 102 GENMTQFSLAPLIERTGSRPCPVSRAELQREMLDYWGRDSVQFGKRVTRCEEDA---DG-VTVWFTDGSSASGDLLIAAD 177 (407)
T ss_dssp CCEEEEEECHHHHHHHSSCCEEEEHHHHHHHHHHHHCGGGEEESCCEEEEEEET---TE-EEEEETTSCEEEESEEEECC
T ss_pred CCEeEEecchhhhhhcCCceEEEEHHHHHHHHHHhCCcCEEEECCEEEEEEecC---Cc-EEEEEcCCCEEeeCEEEECC
Confidence 444 44444321111123456899999999999988668999999999999874 44 88999999999999999999
Q ss_pred CCchhhhhhh-cCC-CCcccceeEEEEeeecCCCCCCccceeEEEecCeEEEEEEcCCCeEEEEEEecCC
Q 044609 163 GVHSMVAQWL-GLS-ESINSGRSSVRGLAVFPHGHGLNQDIRQFVGVGFRAGFIPLNDRDVYWFLNRYSP 230 (232)
Q Consensus 163 G~~S~~r~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~ 230 (232)
|.+|.+|+.+ +.. .+.+.++.++.+.+..+........+..|++++.+++++|++++..+|++....+
T Consensus 178 G~~S~vr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~ 247 (407)
T 3rp8_A 178 GSHSALRPWVLGFTPQRRYAGYVNWNGLVEIDEALAPGDQWTTFVGEGKQVSLMPVSAGRFYFFFDVPLP 247 (407)
T ss_dssp CTTCSSHHHHHSSCCCCEEEEEEEEEEEEECCTTTCCTTEEEEEEETTEEEEEEEETTTEEEEEEEEECC
T ss_pred CcChHHHHHhcCCCCCCcccCcEEEEEEEecccccCCCCceEEEECCCcEEEEEEcCCCeEEEEEEeCCC
Confidence 9999999998 765 5556677788877765554444456677778888899999999998888876543
No 2
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=99.97 E-value=3.5e-29 Score=201.00 Aligned_cols=215 Identities=22% Similarity=0.266 Sum_probs=160.7
Q ss_pred CCcccccEEEECCCHHHHHHHHHHHhCCCcEEEEecCCCCcCcceeeeecccHHHHHHHcCChHHHHhhccCceeeEEEE
Q 044609 1 MEMVEEDVVIIGAGIAGLATAVALRRLGIKALVLEKSDGLRATGAALTLSPNAWLALDALGVSHKLTSVYAPAKRVFVTN 80 (232)
Q Consensus 1 m~~~~~dV~IvG~G~~G~~~A~~L~~~g~~v~viE~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~ 80 (232)
|+++++||+|||||++|+++|+.|+++|++|+|+||.+.+...+++..+.+++.+.++++|+.+.+.....+.....++.
T Consensus 2 M~~~~~dVvIVGaG~aGl~~A~~L~~~G~~V~viE~~~~~~~~~~~~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~ 81 (399)
T 2x3n_A 2 MTDNHIDVLINGCGIGGAMLAYLLGRQGHRVVVVEQARRERAINGADLLKPAGIRVVEAAGLLAEVTRRGGRVRHELEVY 81 (399)
T ss_dssp ---CEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCCC---CCCCEECHHHHHHHHHTTCHHHHHHTTCEEECEEEEE
T ss_pred CCCCcCCEEEECcCHHHHHHHHHHHhCCCcEEEEeCCCCCCccCceeeECchHHHHHHHcCcHHHHHHhCCCcceeEEEe
Confidence 55566899999999999999999999999999999998777778899999999999999999998877666666655554
Q ss_pred cCCCce-eEEeccCCCCCCCCceeeeehHHHHHHHhhhCC---CCeEEeCceEEEEEecCCCCCccE--EEEeCCCcEEE
Q 044609 81 LGTGAT-QELSYAGKSGRIGSGLRSVHRQSLLEALADELP---DDTIQFSSKIAAIDSQTLNGSSAA--IINLGDSTIIK 154 (232)
Q Consensus 81 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~---~~~i~~~~~v~~i~~~~~~g~~~~--~v~~~~g~~~~ 154 (232)
. .+.. ..++...... ......++|..+.+.|.+.++ +++++++++|++++.++ +. + .|++.+|++++
T Consensus 82 ~-~g~~~~~~~~~~~~~--~~~~~~~~r~~l~~~L~~~~~~~~gv~i~~~~~v~~i~~~~---~~-v~g~v~~~~g~~~~ 154 (399)
T 2x3n_A 82 H-DGELLRYFNYSSVDA--RGYFILMPCESLRRLVLEKIDGEATVEMLFETRIEAVQRDE---RH-AIDQVRLNDGRVLR 154 (399)
T ss_dssp E-TTEEEEEEETTSSCG--GGCEEECCHHHHHHHHHHHHTTCTTEEEECSCCEEEEEECT---TS-CEEEEEETTSCEEE
T ss_pred C-CCCEEEecchHHhcc--cCccccccHHHHHHHHHHHhhhcCCcEEEcCCEEEEEEEcC---Cc-eEEEEEECCCCEEE
Confidence 3 3322 4444432222 223467899999999998774 57999999999998864 33 5 78889998999
Q ss_pred ccEEEecCCCchhhhhhhcCCCC-c--ccce--eEEEEeeecCCCCCCccceeEEEec-CeEEEEEEcCCCeEEEEEEe
Q 044609 155 AKVLIGCDGVHSMVAQWLGLSES-I--NSGR--SSVRGLAVFPHGHGLNQDIRQFVGV-GFRAGFIPLNDRDVYWFLNR 227 (232)
Q Consensus 155 a~~vV~A~G~~S~~r~~~~~~~~-~--~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~p~~~~~~~~~~~~ 227 (232)
||+||+|||.+|.+|+.++.+.+ . ++++ .++.+.+..+. +.. . .++.+ +.+++++|++++.+.|++.+
T Consensus 155 ad~vV~AdG~~s~vr~~lg~~~~~~~p~~~~~~~~~~~~~~~~~--~~~--~-~~~~~~~~~~~~~p~~~~~~~~~~~~ 228 (399)
T 2x3n_A 155 PRVVVGADGIASYVRRRLLDIDVERRPYPSPMLVGTFALAPCVA--ERN--R-LYVDSQGGLAYFYPIGFDRARLVVSF 228 (399)
T ss_dssp EEEEEECCCTTCHHHHHTSCCCCCCCCCSSCEEEEEEECCHHHH--HCE--E-EEECTTSCEEEEEEETTTEEEEEEEC
T ss_pred CCEEEECCCCChHHHHHhCCCccccCCCCCCceEEEEEEecCCC--CCc--c-EEEcCCCcEEEEEEcCCCEEEEEEEe
Confidence 99999999999999999987543 3 4555 66665544321 111 3 55566 66788999999887777643
No 3
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=99.97 E-value=3e-28 Score=195.44 Aligned_cols=203 Identities=21% Similarity=0.251 Sum_probs=153.1
Q ss_pred CCcccccEEEECCCHHHHHHHHHHHhCCCcEEEEecCCCC-cCcceeeeecccHHHHHHHcCChHHHHhhccCceeeEEE
Q 044609 1 MEMVEEDVVIIGAGIAGLATAVALRRLGIKALVLEKSDGL-RATGAALTLSPNAWLALDALGVSHKLTSVYAPAKRVFVT 79 (232)
Q Consensus 1 m~~~~~dV~IvG~G~~G~~~A~~L~~~g~~v~viE~~~~~-~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~ 79 (232)
|+++++||+||||||+|+++|+.|+++|++|+|+||.+.+ ...++++.+.+++.+.|+++|+.+ .....+.....++
T Consensus 1 M~~~~~~V~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~~g~~l~~~~~~~l~~~g~~~--~~~~~~~~~~~~~ 78 (397)
T 2vou_A 1 MSPTTDRIAVVGGSISGLTAALMLRDAGVDVDVYERSPQPLSGFGTGIVVQPELVHYLLEQGVEL--DSISVPSSSMEYV 78 (397)
T ss_dssp -CCCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCCCCSCEEECCHHHHHHHHHTTCCG--GGTCBCCCEEEEE
T ss_pred CCCCCCcEEEECCCHHHHHHHHHHHhCCCCEEEEecCCCCCCccccccccChhHHHHHHHcCCcc--ccccccccceEEE
Confidence 7778899999999999999999999999999999998775 445788889999999999999987 4445555555555
Q ss_pred EcCCCce-eEEeccCCCCCCCCceeeeehHHHHHHHhhhCCCCeEEeCceEEEEEecCCCCCccEEEEeCCCcEEEccEE
Q 044609 80 NLGTGAT-QELSYAGKSGRIGSGLRSVHRQSLLEALADELPDDTIQFSSKIAAIDSQTLNGSSAAIINLGDSTIIKAKVL 158 (232)
Q Consensus 80 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~i~~~~~v~~i~~~~~~g~~~~~v~~~~g~~~~a~~v 158 (232)
....+.. ...+.+ .....+..+.+.|.+.+++++++++++|++++.++ +. +.|++.+|+++.||+|
T Consensus 79 ~~~~g~~~~~~~~~---------~~~~~~~~l~~~L~~~~~~~~i~~~~~v~~i~~~~---~~-v~v~~~~g~~~~ad~v 145 (397)
T 2vou_A 79 DALTGERVGSVPAD---------WRFTSYDSIYGGLYELFGPERYHTSKCLVGLSQDS---ET-VQMRFSDGTKAEANWV 145 (397)
T ss_dssp ETTTCCEEEEEECC---------CCEEEHHHHHHHHHHHHCSTTEETTCCEEEEEECS---SC-EEEEETTSCEEEESEE
T ss_pred ecCCCCccccccCc---------ccccCHHHHHHHHHHhCCCcEEEcCCEEEEEEecC---CE-EEEEECCCCEEECCEE
Confidence 5313333 222221 12467889999999888889999999999998764 34 7888999999999999
Q ss_pred EecCCCchhhhhhhcCC-CCcccceeEEEEeeecCCCCC-----CccceeEEEecCeEEEEEEcCCC
Q 044609 159 IGCDGVHSMVAQWLGLS-ESINSGRSSVRGLAVFPHGHG-----LNQDIRQFVGVGFRAGFIPLNDR 219 (232)
Q Consensus 159 V~A~G~~S~~r~~~~~~-~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~p~~~~ 219 (232)
|+|||.+|.+|+.++ + .+.+.++.+|++.+......+ ....+..+.+++.++.++|++++
T Consensus 146 V~AdG~~S~vr~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 211 (397)
T 2vou_A 146 IGADGGASVVRKRLL-GIEPTYAGYVTWRGVLQPGEVADDVWNYFNDKFTYGLLDDGHLIAYPIPGR 211 (397)
T ss_dssp EECCCTTCHHHHHHH-CCCCEEEEEEEEEEEECTTSSCHHHHHHHTTEEEEEEETTEEEEEEEECCS
T ss_pred EECCCcchhHHHHhc-cCCCCccceEEEEEEeeccccChhhhhhhcCceeEEecCCCEEEEEECCCC
Confidence 999999999999998 5 344555666776655322111 01234556677777888898764
No 4
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=99.97 E-value=3.6e-28 Score=193.86 Aligned_cols=210 Identities=26% Similarity=0.335 Sum_probs=161.5
Q ss_pred ccccEEEECCCHHHHHHHHHHHhCCCcEEEEecCCCCcCcceeeeecccHHHHHHHcCChHHHHhhccCceeeEEEEcCC
Q 044609 4 VEEDVVIIGAGIAGLATAVALRRLGIKALVLEKSDGLRATGAALTLSPNAWLALDALGVSHKLTSVYAPAKRVFVTNLGT 83 (232)
Q Consensus 4 ~~~dV~IvG~G~~G~~~A~~L~~~g~~v~viE~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~ 83 (232)
..+||+|||||++|+++|+.|+++|++|+|+||.+.+...++++.+.+++.+.|+++|+.+.+.....+.....++..
T Consensus 10 ~~~dVvIVGaG~aGl~~A~~L~~~G~~v~viE~~~~~~~~~~~~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~-- 87 (379)
T 3alj_A 10 KTRRAEVAGGGFAGLTAAIALKQNGWDVRLHEKSSELRAFGAGIYLWHNGLRVLEGLGALDDVLQGSHTPPTYETWMH-- 87 (379)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSCCCCSSEEEEEHHHHHHHHHTTCHHHHHTTCBCCSCEEEEET--
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCCEEEEecCCCCCCCCceEEeCccHHHHHHHcCCHHHHHhhCCCccceEEEeC--
Confidence 358999999999999999999999999999999988877788999999999999999999998887777777766654
Q ss_pred Cce-eEEeccCCCCCCCCceeeeehHHHHHHHhhhCC--CCeEEeCceEEEEEecCCCCCccEEEEeCCCcEEEccEEEe
Q 044609 84 GAT-QELSYAGKSGRIGSGLRSVHRQSLLEALADELP--DDTIQFSSKIAAIDSQTLNGSSAAIINLGDSTIIKAKVLIG 160 (232)
Q Consensus 84 ~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~--~~~i~~~~~v~~i~~~~~~g~~~~~v~~~~g~~~~a~~vV~ 160 (232)
+.. ..++.. + . ..+.++|..+.+.|.+.+. +++++++++|++++. + + . |++.+|++++||+||+
T Consensus 88 g~~~~~~~~~---~--~-~~~~~~r~~l~~~L~~~~~~~gv~i~~~~~v~~i~~-~--~-~---v~~~~g~~~~ad~vV~ 154 (379)
T 3alj_A 88 NKSVSKETFN---G--L-PWRIMTRSHLHDALVNRARALGVDISVNSEAVAADP-V--G-R---LTLQTGEVLEADLIVG 154 (379)
T ss_dssp TEEEEEECGG---G--C-CEEEEEHHHHHHHHHHHHHHTTCEEESSCCEEEEET-T--T-E---EEETTSCEEECSEEEE
T ss_pred CceeeeccCC---C--C-ceEEECHHHHHHHHHHHHHhcCCEEEeCCEEEEEEe-C--C-E---EEECCCCEEEcCEEEE
Confidence 433 333322 1 1 2568999999999988764 789999999999986 3 4 3 5677888999999999
Q ss_pred cCCCchhhhhhhcCC-CCcccceeEEEEeeecCC---CCC-CccceeE--EEecCeEEEEEEcCCCeEEEEEEec
Q 044609 161 CDGVHSMVAQWLGLS-ESINSGRSSVRGLAVFPH---GHG-LNQDIRQ--FVGVGFRAGFIPLNDRDVYWFLNRY 228 (232)
Q Consensus 161 A~G~~S~~r~~~~~~-~~~~~~~~~~~~~~~~~~---~~~-~~~~~~~--~~~~~~~~~~~p~~~~~~~~~~~~~ 228 (232)
|||.+|.+|+.++.. .+.+.++.++.+.+.... +.. ....... +++++.+++++|++++..+|++...
T Consensus 155 AdG~~s~vr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~ 229 (379)
T 3alj_A 155 ADGVGSKVRDSIGFKQDRWVSKDGLIRLIVPRMKKELGHGEWDNTIDMWNFWPRVQRILYSPCNENELYLGLMAP 229 (379)
T ss_dssp CCCTTCHHHHHHCCCEEEEEEEEEEEEEEEECCHHHHCSSCTTSEEEEECCSSSCCEEEEEECSSSEEEEEEEEC
T ss_pred CCCccHHHHHHhcCCCCcCcCCcEEEEEEechhhccCCcCCcccccccceEECCCCEEEEEECCCCcEEEEEEec
Confidence 999999999999754 334456666666655421 111 1112222 4566777889999999988877664
No 5
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=99.97 E-value=7e-28 Score=198.03 Aligned_cols=209 Identities=17% Similarity=0.180 Sum_probs=155.0
Q ss_pred ccccEEEECCCHHHHHHHHHHHhCCCcEEEEecCCCCcCcceeeeecccHHHHHHHcCChHHHHhhccCceeeEEEEcCC
Q 044609 4 VEEDVVIIGAGIAGLATAVALRRLGIKALVLEKSDGLRATGAALTLSPNAWLALDALGVSHKLTSVYAPAKRVFVTNLGT 83 (232)
Q Consensus 4 ~~~dV~IvG~G~~G~~~A~~L~~~g~~v~viE~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~ 83 (232)
+++||+||||||+|+++|+.|+++|++|+||||.+.+...+++..++++++++|+++|+.+.+... .+.... .+ .
T Consensus 11 ~~~dVlIVGaGpaGl~~A~~La~~G~~v~vlE~~~~~~~~~r~~~l~~~~~~~l~~lGl~~~~~~~-~~~~~~--~~--~ 85 (499)
T 2qa2_A 11 SDASVIVVGAGPAGLMLAGELRLGGVDVMVLEQLPQRTGESRGLGFTARTMEVFDQRGILPAFGPV-ETSTQG--HF--G 85 (499)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCSSCCCCCCSEEECHHHHHHHHHTTCGGGGCSC-CEESEE--EE--T
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCceeEECHHHHHHHHHCCCHHHHHhc-cccccc--ee--c
Confidence 458999999999999999999999999999999988877788999999999999999999887654 222111 11 1
Q ss_pred CceeEEeccCCCCCCCCceeeeehHHHHHHHhhhCC--CCeEEeCceEEEEEecCCCCCccEEEEeCCCc---EEEccEE
Q 044609 84 GATQELSYAGKSGRIGSGLRSVHRQSLLEALADELP--DDTIQFSSKIAAIDSQTLNGSSAAIINLGDST---IIKAKVL 158 (232)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~--~~~i~~~~~v~~i~~~~~~g~~~~~v~~~~g~---~~~a~~v 158 (232)
+ ..+++...... .+....+++..+.+.|.+.+. +++++++++|++++.++ +. +.|++.++. +++||+|
T Consensus 86 ~--~~~~~~~~~~~-~~~~~~i~~~~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~---~~-v~v~~~~~~g~~~~~a~~v 158 (499)
T 2qa2_A 86 G--RPVDFGVLEGA-HYGVKAVPQSTTESVLEEWALGRGAELLRGHTVRALTDEG---DH-VVVEVEGPDGPRSLTTRYV 158 (499)
T ss_dssp T--EEEEGGGSTTC-CCEEEEEEHHHHHHHHHHHHHHTTCEEEESCEEEEEEECS---SC-EEEEEECSSCEEEEEEEEE
T ss_pred c--eecccccCCCC-CCceEecCHHHHHHHHHHHHHhCCCEEEcCCEEEEEEEeC---CE-EEEEEEcCCCcEEEEeCEE
Confidence 1 12333222111 223567899999999988764 78999999999998874 33 667777764 7999999
Q ss_pred EecCCCchhhhhhhcCCCCccc-ceeEEEEeeecCCCCCCccceeEEEecCeEEEEEEcCCCeEEEEEEe
Q 044609 159 IGCDGVHSMVAQWLGLSESINS-GRSSVRGLAVFPHGHGLNQDIRQFVGVGFRAGFIPLNDRDVYWFLNR 227 (232)
Q Consensus 159 V~A~G~~S~~r~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 227 (232)
|+|||.+|.+|+.++++.+... .+..+.+.+..... + ..+..++.++.+++++|++++..++.+..
T Consensus 159 VgADG~~S~VR~~lg~~~~~~~~~~~~~~~~v~~~~~-~--~~~~~~~~~~g~~~~~P~~~g~~~~~~~~ 225 (499)
T 2qa2_A 159 VGCDGGRSTVRKAAGFDFPGTSASREMFLADIRGCEI-T--PRPIGETVPLGMVMSAPLGDGVDRIIVCE 225 (499)
T ss_dssp EECCCTTCHHHHHTTCCCCEECCCCCEEEEEEESCCC-C--CEEEEEEETTEEEEEEECSSSCEEEEEEE
T ss_pred EEccCcccHHHHHcCCCCCCCCCccEEEEEEEEECCC-C--cceEEEECCCeEEEEEEcCCCEEEEEEEe
Confidence 9999999999999998766543 34455555554432 1 22444556666788999999876555543
No 6
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=99.96 E-value=8.9e-28 Score=197.45 Aligned_cols=209 Identities=16% Similarity=0.171 Sum_probs=153.6
Q ss_pred ccccEEEECCCHHHHHHHHHHHhCCCcEEEEecCCCCcCcceeeeecccHHHHHHHcCChHHHHhhccCceeeEEEEcCC
Q 044609 4 VEEDVVIIGAGIAGLATAVALRRLGIKALVLEKSDGLRATGAALTLSPNAWLALDALGVSHKLTSVYAPAKRVFVTNLGT 83 (232)
Q Consensus 4 ~~~dV~IvG~G~~G~~~A~~L~~~g~~v~viE~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~ 83 (232)
+++||+||||||+|+++|+.|+++|++|+||||.+.+...+++..+.++++++|+++|+.+.+... .+..... + .
T Consensus 10 ~~~dVlIVGaGpaGl~~A~~La~~G~~v~vlE~~~~~~~~~r~~~l~~~~~~~l~~lGl~~~~~~~-~~~~~~~--~--~ 84 (500)
T 2qa1_A 10 SDAAVIVVGAGPAGMMLAGELRLAGVEVVVLERLVERTGESRGLGFTARTMEVFDQRGILPRFGEV-ETSTQGH--F--G 84 (500)
T ss_dssp SBCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCCC-CCCCCSEEECHHHHHHHHTTTCGGGGCSC-CBCCEEE--E--T
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCCCCcceECHHHHHHHHHCCCHHHHHhc-ccccccc--c--c
Confidence 568999999999999999999999999999999988877788999999999999999999887655 3222211 1 1
Q ss_pred CceeEEeccCCCCCCCCceeeeehHHHHHHHhhhCC--CCeEEeCceEEEEEecCCCCCccEEEEeCCCc---EEEccEE
Q 044609 84 GATQELSYAGKSGRIGSGLRSVHRQSLLEALADELP--DDTIQFSSKIAAIDSQTLNGSSAAIINLGDST---IIKAKVL 158 (232)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~--~~~i~~~~~v~~i~~~~~~g~~~~~v~~~~g~---~~~a~~v 158 (232)
+ ..+++...... .+....+++..+.+.|.+.+. +++++++++|++++.++ +. +.|++.++. +++||+|
T Consensus 85 ~--~~~~~~~~~~~-~~~~~~i~~~~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~---~~-v~v~~~~~~g~~~~~a~~v 157 (500)
T 2qa1_A 85 G--LPIDFGVLEGA-WQAAKTVPQSVTETHLEQWATGLGADIRRGHEVLSLTDDG---AG-VTVEVRGPEGKHTLRAAYL 157 (500)
T ss_dssp T--EEEEGGGSTTG-GGCEEEEEHHHHHHHHHHHHHHTTCEEEETCEEEEEEEET---TE-EEEEEEETTEEEEEEESEE
T ss_pred c--eecccccCCCC-CCceeecCHHHHHHHHHHHHHHCCCEEECCcEEEEEEEcC---Ce-EEEEEEcCCCCEEEEeCEE
Confidence 1 12333221110 223567899999999988764 78999999999998874 34 667776664 7999999
Q ss_pred EecCCCchhhhhhhcCCCCccc-ceeEEEEeeecCCCCCCccceeEEEecCeEEEEEEcCCCeEEEEEEe
Q 044609 159 IGCDGVHSMVAQWLGLSESINS-GRSSVRGLAVFPHGHGLNQDIRQFVGVGFRAGFIPLNDRDVYWFLNR 227 (232)
Q Consensus 159 V~A~G~~S~~r~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 227 (232)
|+|||.+|.+|+.++.+.+... .+..+.+.+..... + ..+..++.++.+++++|++++..++.+..
T Consensus 158 VgADG~~S~VR~~lg~~~~~~~~~~~~~~~~~~~~~~-~--~~~~~~~~~~g~~~~~p~~~g~~~~~~~~ 224 (500)
T 2qa1_A 158 VGCDGGRSSVRKAAGFDFPGTAATMEMYLADIKGVEL-Q--PRMIGETLPGGMVMVGPLPGGITRIIVCE 224 (500)
T ss_dssp EECCCTTCHHHHHTTCCCCEECCCCEEEEEEEESCCC-C--CEEEEEEETTEEEEEEEETTTEEEEEEEE
T ss_pred EECCCcchHHHHHcCCCcCCCccceEEEEEEEEeCCC-C--CceEEEECCCcEEEEEEcCCCEEEEEEEc
Confidence 9999999999999998766543 34455555544321 1 22444556666788999999876555443
No 7
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=99.96 E-value=2.1e-27 Score=190.55 Aligned_cols=216 Identities=19% Similarity=0.206 Sum_probs=157.0
Q ss_pred ccccEEEECCCHHHHHHHHHHHhCCCcEEEEecCCCCcC--cceeeeecc-cHHHHHHHcCChHHHHhhccCceeeEEEE
Q 044609 4 VEEDVVIIGAGIAGLATAVALRRLGIKALVLEKSDGLRA--TGAALTLSP-NAWLALDALGVSHKLTSVYAPAKRVFVTN 80 (232)
Q Consensus 4 ~~~dV~IvG~G~~G~~~A~~L~~~g~~v~viE~~~~~~~--~~~~~~~~~-~~~~~l~~~g~~~~~~~~~~~~~~~~~~~ 80 (232)
+++||+|||||++|+++|+.|++.|++|+||||.+.+.. .+.++.+.+ ++.+.|+++|+++.+.....+... .++.
T Consensus 25 ~~~dV~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~g~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~-~~~~ 103 (398)
T 2xdo_A 25 SDKNVAIIGGGPVGLTMAKLLQQNGIDVSVYERDNDREARIFGGTLDLHKGSGQEAMKKAGLLQTYYDLALPMGV-NIAD 103 (398)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHTTTCEEEEEECSSSTTCCCCSCCEECCTTTHHHHHHHTTCHHHHHHHCBCCCE-EEEC
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCccccccCCeeeeCCccHHHHHHhcChHHHHHHhhcccce-EEEC
Confidence 458999999999999999999999999999999876532 455566654 568999999999998876665554 3332
Q ss_pred cCCCceeEEec--cCCCCCCCCceeeeehHHHHHHHhhhCCCCeEEeCceEEEEEecCCCCCccEEEEeCCCcEEEccEE
Q 044609 81 LGTGATQELSY--AGKSGRIGSGLRSVHRQSLLEALADELPDDTIQFSSKIAAIDSQTLNGSSAAIINLGDSTIIKAKVL 158 (232)
Q Consensus 81 ~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~i~~~~~v~~i~~~~~~g~~~~~v~~~~g~~~~a~~v 158 (232)
..+.. .... +.. . ......++|..|.+.|.+.+++++++++++|++++.++ +. +.|++.+|++++||+|
T Consensus 104 -~~g~~-~~~~~~~~~-~--~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~i~~~~---~~-v~v~~~~g~~~~ad~v 174 (398)
T 2xdo_A 104 -EKGNI-LSTKNVKPE-N--RFDNPEINRNDLRAILLNSLENDTVIWDRKLVMLEPGK---KK-WTLTFENKPSETADLV 174 (398)
T ss_dssp -SSSEE-EEECCCGGG-T--TSSCCEECHHHHHHHHHHTSCTTSEEESCCEEEEEECS---SS-EEEEETTSCCEEESEE
T ss_pred -CCCCc-hhhcccccc-C--CCCCceECHHHHHHHHHhhcCCCEEEECCEEEEEEECC---CE-EEEEECCCcEEecCEE
Confidence 33332 1121 111 1 12233689999999999988878899999999998764 34 7888999988999999
Q ss_pred EecCCCchhhhhhhcCCCCcccceeEEEEeeecCCC-CC-----CccceeEEEecCeEEEEEEcCCCeEEEEEEecC
Q 044609 159 IGCDGVHSMVAQWLGLSESINSGRSSVRGLAVFPHG-HG-----LNQDIRQFVGVGFRAGFIPLNDRDVYWFLNRYS 229 (232)
Q Consensus 159 V~A~G~~S~~r~~~~~~~~~~~~~~~~~~~~~~~~~-~~-----~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~ 229 (232)
|+|||.+|.+|+.++...+.+.+..++.+.+..... .+ .......+++++..++++|.+++..+|++.+..
T Consensus 175 V~AdG~~S~vR~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~ 251 (398)
T 2xdo_A 175 ILANGGMSKVRKFVTDTEVEETGTFNIQADIHQPEINCPGFFQLCNGNRLMASHQGNLLFANPNNNGALHFGISFKT 251 (398)
T ss_dssp EECSCTTCSCCTTTCCCCCEEEEEEEEEEEESSHHHHSHHHHHHHTTSEEEEEETTEEEEEEEEETTEEEEEEEEEC
T ss_pred EECCCcchhHHhhccCCCceEcceEEEEEEeCchhccCchhHhhcCCceEEEecCCCeEEEEeCCCCcEEEEEEEec
Confidence 999999999999987655666666666665432110 00 012234555677777788999988777766543
No 8
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=99.96 E-value=4.8e-27 Score=189.76 Aligned_cols=222 Identities=18% Similarity=0.173 Sum_probs=157.1
Q ss_pred CCcccccEEEECCCHHHHHHHHHHHhCCCcEEEEecCCCCcCcceeeeecccHHHHHHHcCChHHHHhhccCce-eeEEE
Q 044609 1 MEMVEEDVVIIGAGIAGLATAVALRRLGIKALVLEKSDGLRATGAALTLSPNAWLALDALGVSHKLTSVYAPAK-RVFVT 79 (232)
Q Consensus 1 m~~~~~dV~IvG~G~~G~~~A~~L~~~g~~v~viE~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~-~~~~~ 79 (232)
|+++++||+|||||++|+++|+.|+++|++|+|+||.+.+.. +.+..+.+...+.++++|+.+.+........ ...+.
T Consensus 1 M~~~~~dVvIIGgG~aGl~~A~~La~~G~~V~v~E~~~~~~~-~~g~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~ 79 (421)
T 3nix_A 1 MQREKVDVLVIGAGPAGTVAASLVNKSGFKVKIVEKQKFPRF-VIGESLLPRCMEHLDEAGFLDAVKAQGFQQKFGAKFV 79 (421)
T ss_dssp ---CEEEEEEECCSHHHHHHHHHHHTTTCCEEEECSSCSSCC-CSCCBCCGGGHHHHHHTTCHHHHHHTTCEEECEEEEE
T ss_pred CCCccCcEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCCCC-cccCcccHhHHHHHHHcCChHHHHHcCCcccCCcEEE
Confidence 676779999999999999999999999999999999976643 5677888999999999999998877654433 33333
Q ss_pred EcCCCceeEEeccCCCCCCCCceeeeehHHHHHHHhhhCC--CCeEEeCceEEEEEecCCCCCccEEEEeCCCc--EEEc
Q 044609 80 NLGTGATQELSYAGKSGRIGSGLRSVHRQSLLEALADELP--DDTIQFSSKIAAIDSQTLNGSSAAIINLGDST--IIKA 155 (232)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~--~~~i~~~~~v~~i~~~~~~g~~~~~v~~~~g~--~~~a 155 (232)
+ ......+++...........+.++|..+.+.|.+.+. +++++++++|+++..+++ +.. +.+.+.+|+ +++|
T Consensus 80 ~--~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~L~~~a~~~gv~i~~~~~v~~i~~~~~-~~~-v~v~~~~g~~~~~~a 155 (421)
T 3nix_A 80 R--GKEIADFNFSDQFSNGWNWTWQVPRGNFDKTLADEAARQGVDVEYEVGVTDIKFFGT-DSV-TTIEDINGNKREIEA 155 (421)
T ss_dssp E--TTEEEEEETTSCSSCSCCCEEECCHHHHHHHHHHHHHHHTCEEECSEEEEEEEEETT-EEE-EEEEETTSCEEEEEE
T ss_pred e--CCeeEEEeehhhcCCCCCceeEECHHHHHHHHHHHHHhCCCEEEcCCEEEEEEEeCC-EEE-EEEEcCCCCEEEEEc
Confidence 2 2333445554332211344678999999999998764 899999999999988642 223 667778887 7999
Q ss_pred cEEEecCCCchhhhhhhcCCCCcc-cceeEEEEeeecCCCC-CCc-cceeEEE---ecCeEEEEEEcCCCeEEEEEEe
Q 044609 156 KVLIGCDGVHSMVAQWLGLSESIN-SGRSSVRGLAVFPHGH-GLN-QDIRQFV---GVGFRAGFIPLNDRDVYWFLNR 227 (232)
Q Consensus 156 ~~vV~A~G~~S~~r~~~~~~~~~~-~~~~~~~~~~~~~~~~-~~~-~~~~~~~---~~~~~~~~~p~~~~~~~~~~~~ 227 (232)
|+||+|||.+|.+++.++.+.+.. +...++...+...... ..+ .....++ .++.+++++|++++.+.+.++.
T Consensus 156 ~~vV~A~G~~s~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~P~~~~~~~vg~~~ 233 (421)
T 3nix_A 156 RFIIDASGYGRVIPRMFGLDKPSGFESRRTLFTHIKDVKRPVAAEMEGNRITAVVHKPKVWIWVIPFSNGNTSVGFVG 233 (421)
T ss_dssp EEEEECCGGGCHHHHHTTCEECCSSCCCEEEEEEEECTTCCC----CCSEEEEEEEETTEEEEEEECTTSEEEEEEEE
T ss_pred CEEEECCCCchhhHHhcCCCCCCcCCCcEEEEEEECCCcCCCccCCCCeEEEEEeCCCCEEEEEEEECCCCEEEEEEe
Confidence 999999999999999998765543 3344444443332211 111 1112222 3566789999999987666654
No 9
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=99.96 E-value=4.8e-27 Score=198.78 Aligned_cols=223 Identities=19% Similarity=0.194 Sum_probs=157.7
Q ss_pred cccEEEECCCHHHHHHHHHHHh-----CCCcEEEEecCCCCcCcceeeeecccHHHHHHHcCChHHHHhhccCceeeEEE
Q 044609 5 EEDVVIIGAGIAGLATAVALRR-----LGIKALVLEKSDGLRATGAALTLSPNAWLALDALGVSHKLTSVYAPAKRVFVT 79 (232)
Q Consensus 5 ~~dV~IvG~G~~G~~~A~~L~~-----~g~~v~viE~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~ 79 (232)
++||+||||||+|+++|+.|++ .|++|+||||.+.+...+++..++++++++|+++|+++.+.....++..+.++
T Consensus 8 ~~dVlIVGaGpaGL~lA~~La~~~~~~~Gi~v~viE~~~~~~~~gra~~l~~~tle~l~~lGl~~~l~~~~~~~~~~~~~ 87 (665)
T 1pn0_A 8 YCDVLIVGAGPAGLMAARVLSEYVRQKPDLKVRIIDKRSTKVYNGQADGLQCRTLESLKNLGLADKILSEANDMSTIALY 87 (665)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEECSSSSCCCSCSCCEECHHHHHHHHTTTCHHHHHTTCBCCCEEEEE
T ss_pred CCcEEEECcCHHHHHHHHHHhccccccCCCCEEEEeCCCCCCCCCceeEEChHHHHHHHHCCCHHHHHHhccccceEEEE
Confidence 5899999999999999999999 99999999999888778899999999999999999999998888888777776
Q ss_pred EcCC-Cce-eEEeccC-CCCCCCCceeeeehHHHHHHHhhhCC--C---CeEEeCceEEEEEecCC-----CCCccEEEE
Q 044609 80 NLGT-GAT-QELSYAG-KSGRIGSGLRSVHRQSLLEALADELP--D---DTIQFSSKIAAIDSQTL-----NGSSAAIIN 146 (232)
Q Consensus 80 ~~~~-~~~-~~~~~~~-~~~~~~~~~~~~~~~~l~~~l~~~~~--~---~~i~~~~~v~~i~~~~~-----~g~~~~~v~ 146 (232)
.... +.. ....+.. ..+........++|..+.+.|.+.+. + ++++++++|++++.++. ++.. +.++
T Consensus 88 ~~~~~g~i~~~~~~~~~~~~~~~~~~~~l~q~~le~~L~~~~~~~g~~~v~v~~g~~v~~~~~d~~~~~~~~~~~-V~v~ 166 (665)
T 1pn0_A 88 NPDENGHIRRTDRIPDTLPGISRYHQVVLHQGRIERRILDSIAEISDTRIKVERPLIPEKMEIDSSKAEDPEAYP-VTMT 166 (665)
T ss_dssp EECTTSCEEEEEEEESSCTTSCSSCCEECCHHHHHHHHHHHHHHHHTTSSCEECSEEEEEEEECGGGTTCTTCCC-EEEE
T ss_pred eCCCCcceEeecccCcccCCCCCCeeEEeeHHHHHHHHHHHHHhcCCCceEEEeCCEEEEEEecCcccccCCCCC-EEEE
Confidence 6432 222 1111211 11111233457899999999988764 3 79999999999987640 0123 4444
Q ss_pred e------------------------------------------CCC--cEEEccEEEecCCCchhhhhhhcCCCCcccce
Q 044609 147 L------------------------------------------GDS--TIIKAKVLIGCDGVHSMVAQWLGLSESINSGR 182 (232)
Q Consensus 147 ~------------------------------------------~~g--~~~~a~~vV~A~G~~S~~r~~~~~~~~~~~~~ 182 (232)
+ .+| ++++||+||+|||++|.+|+.++.+.+.....
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~d~~~~~~~~~~~G~~~~i~A~~VVGADG~~S~VR~~lg~~~~g~~~~ 246 (665)
T 1pn0_A 167 LRYMSEDESTPLQFGHKTENGLFRSNLQTQEEEDANYRLPEGKEAGEIETVHCKYVIGCDGGHSWVRRTLGFEMIGEQTD 246 (665)
T ss_dssp EEECCGGGSCCCTTCCCCCSSSCCCHHHHHHHHHTSCCCSTTCCTTCEEEEEEEEEEECCCTTCHHHHHHTCCCEEEEEE
T ss_pred EEecccccccccccccccccccccccccccccccccccccccCCCCceEEEEeCEEEeccCCCCHHHHhcCCCCCCCCcc
Confidence 3 245 47999999999999999999999876654443
Q ss_pred eEEEEeeec--CCCCCCccceeEEE-ecCeEEEEEEcCCCeEEEEEEecC
Q 044609 183 SSVRGLAVF--PHGHGLNQDIRQFV-GVGFRAGFIPLNDRDVYWFLNRYS 229 (232)
Q Consensus 183 ~~~~~~~~~--~~~~~~~~~~~~~~-~~~~~~~~~p~~~~~~~~~~~~~~ 229 (232)
..| +++.. ....+.......+. .++.+++++|++++.+++++.+..
T Consensus 247 ~~~-~v~d~~~~~~~p~~~~~~~~~~~~~g~~~~~P~~~~~~r~~~~~~~ 295 (665)
T 1pn0_A 247 YIW-GVLDAVPASNFPDIRSRCAIHSAESGSIMIIPRENNLVRFYVQLQA 295 (665)
T ss_dssp EEE-EEEEEEEECCCTTTTSEEEEECSSSCEEEEEECSTTCEEEEEEECC
T ss_pred EEE-EEEEEEECCCCCCcceEEEEEeCCCceEEEEEcCCCEEEEEEEeCC
Confidence 333 33221 11111111112222 245568899999997777766543
No 10
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=99.96 E-value=1.8e-27 Score=197.65 Aligned_cols=220 Identities=20% Similarity=0.264 Sum_probs=153.8
Q ss_pred CCcccccEEEECCCHHHHHHHHHHHhCCCcEEEEecCCCCcCcceeeeecccHHHHHHHcCChHHHHhhccCceee---E
Q 044609 1 MEMVEEDVVIIGAGIAGLATAVALRRLGIKALVLEKSDGLRATGAALTLSPNAWLALDALGVSHKLTSVYAPAKRV---F 77 (232)
Q Consensus 1 m~~~~~dV~IvG~G~~G~~~A~~L~~~g~~v~viE~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~---~ 77 (232)
|+++++||+||||||+|+++|+.|+++|++|+||||.+.+...+++..+.+++++.|+++|+.+.+.....+.... .
T Consensus 1 M~~~~~dVlIVGaG~aGl~~A~~La~~G~~v~viEr~~~~~~~~~~~~l~~~~~~~l~~lGl~~~~~~~~~~~~~~~~~~ 80 (535)
T 3ihg_A 1 MNDHEVDVLVVGAGLGGLSTAMFLARQGVRVLVVERRPGLSPYPRAAGQNPRTMELLRIGGVADEVVRADDIRGTQGDFV 80 (535)
T ss_dssp CCCCSEEEEEECCSHHHHHHHHHHHTTTCCEEEECSSSSCCCCCCSCCBCHHHHHHHHHTTCHHHHHHSCCSSCTTSCCE
T ss_pred CCCccCcEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCCCccceECHHHHHHHHHcCCHHHHHhhCCCccccccee
Confidence 7777899999999999999999999999999999999988878889999999999999999999988876655432 1
Q ss_pred --EEEcCCCce-eEE--eccC----CCCCCCCceeeeehHHHHHHHhhhCC--CCeEEeCceEEEEEecCCCCC--ccEE
Q 044609 78 --VTNLGTGAT-QEL--SYAG----KSGRIGSGLRSVHRQSLLEALADELP--DDTIQFSSKIAAIDSQTLNGS--SAAI 144 (232)
Q Consensus 78 --~~~~~~~~~-~~~--~~~~----~~~~~~~~~~~~~~~~l~~~l~~~~~--~~~i~~~~~v~~i~~~~~~g~--~~~~ 144 (232)
......+.. ..+ .+.. .....+.....+++..+.+.|.+.+. +++++++++|++++.+++ +. . +.
T Consensus 81 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~a~~~gv~i~~~~~v~~i~~~~~-~~~~~-v~ 158 (535)
T 3ihg_A 81 IRLAESVRGEILRTVSESFDDMVAATEPCTPAGWAMLSQDKLEPILLAQARKHGGAIRFGTRLLSFRQHDD-DAGAG-VT 158 (535)
T ss_dssp EEEESSSSSCEEEEEESCHHHHHHTTGGGCSCCCBCCCHHHHHHHHHHHHHHTTCEEESSCEEEEEEEECG-GGCSE-EE
T ss_pred eeEEeccCCceeeeccccccccccccccCCCCcccccCHHHHHHHHHHHHHhCCCEEEeCCEEEEEEECCC-Ccccc-EE
Confidence 111122222 211 1110 01101233557899999999988764 799999999999998741 10 4 66
Q ss_pred EEeCCC---cEEEccEEEecCCCchhhhhhhcCCCCcccceeEEE-Eeeec--CCCCCCccc-eeEEEecCeEEEEEEcC
Q 044609 145 INLGDS---TIIKAKVLIGCDGVHSMVAQWLGLSESINSGRSSVR-GLAVF--PHGHGLNQD-IRQFVGVGFRAGFIPLN 217 (232)
Q Consensus 145 v~~~~g---~~~~a~~vV~A~G~~S~~r~~~~~~~~~~~~~~~~~-~~~~~--~~~~~~~~~-~~~~~~~~~~~~~~p~~ 217 (232)
+++.++ .+++||+||+|||.+|.+|+.+|++.+.......+. ..+.. +........ +..++.++...+++|++
T Consensus 159 v~~~~~~~~~~i~a~~vV~AdG~~S~vR~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~p~~ 238 (535)
T 3ihg_A 159 ARLAGPDGEYDLRAGYLVGADGNRSLVRESLGIGRYGHGTLTHMVGVIFDADLSGIMEPGTTGWYYLHHPEFKGTFGPTD 238 (535)
T ss_dssp EEEEETTEEEEEEEEEEEECCCTTCHHHHHTTCCEEEEEEEEEEEEEEEECCGGGTSCTTCCEEEEEECSSCEEEEEECS
T ss_pred EEEEcCCCeEEEEeCEEEECCCCcchHHHHcCCCcCCCCccceEEEEEEeccChhhccCCceEEEEEECCCceEEEEEec
Confidence 777665 689999999999999999999988765543222222 22222 111111112 33444566667788998
Q ss_pred CCeEE
Q 044609 218 DRDVY 222 (232)
Q Consensus 218 ~~~~~ 222 (232)
++..+
T Consensus 239 ~~~~~ 243 (535)
T 3ihg_A 239 RPDRH 243 (535)
T ss_dssp STTEE
T ss_pred CCCEE
Confidence 75443
No 11
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=99.96 E-value=6.8e-27 Score=188.27 Aligned_cols=206 Identities=25% Similarity=0.339 Sum_probs=148.6
Q ss_pred ccccEEEECCCHHHHHHHHHHHhCCCc-EEEEecCCCCcCcceeeeecccHHHHHHHcCChHHHHhhccCceeeEEEEcC
Q 044609 4 VEEDVVIIGAGIAGLATAVALRRLGIK-ALVLEKSDGLRATGAALTLSPNAWLALDALGVSHKLTSVYAPAKRVFVTNLG 82 (232)
Q Consensus 4 ~~~dV~IvG~G~~G~~~A~~L~~~g~~-v~viE~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~ 82 (232)
.++||+||||||+|+++|+.|+++|++ |+||||.+.+...++++.+++++.+.|+++|+.+.+.....+.....++..
T Consensus 3 ~~~dVvIVGaG~aGl~~A~~L~~~G~~~v~v~E~~~~~~~~g~g~~l~~~~~~~l~~lg~~~~l~~~~~~~~~~~~~~~- 81 (410)
T 3c96_A 3 EPIDILIAGAGIGGLSCALALHQAGIGKVTLLESSSEIRPLGVGINIQPAAVEALAELGLGPALAATAIPTHELRYIDQ- 81 (410)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESSSSCCCCSCEEEECHHHHHHHHHTTCHHHHHHHSEEECEEEEECT-
T ss_pred CCCeEEEECCCHHHHHHHHHHHhCCCCeEEEEECCCCcccceeEEEEChHHHHHHHHCCChHHHHhhCCCcceEEEEcC-
Confidence 468999999999999999999999999 999999988877788999999999999999999988877666655555442
Q ss_pred CCce-eEEeccCCCCCCCCceeeeehHHHHHHHhhhCC---C-CeEEeCceEEEEEecCCCCCccEEEEeCC---C--cE
Q 044609 83 TGAT-QELSYAGKSGRIGSGLRSVHRQSLLEALADELP---D-DTIQFSSKIAAIDSQTLNGSSAAIINLGD---S--TI 152 (232)
Q Consensus 83 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~---~-~~i~~~~~v~~i~~~~~~g~~~~~v~~~~---g--~~ 152 (232)
.+.. ...+.....+ +......++|..|.+.|.+.+. + ++++++++|+++.. + +. +.|.+.+ | .+
T Consensus 82 ~g~~~~~~~~~~~~~-~~~~~~~i~r~~l~~~L~~~~~~~~g~~~v~~~~~v~~i~~-~--~~--v~v~~~~~~~g~~~~ 155 (410)
T 3c96_A 82 SGATVWSEPRGVEAG-NAYPQYSIHRGELQMILLAAVRERLGQQAVRTGLGVERIEE-R--DG--RVLIGARDGHGKPQA 155 (410)
T ss_dssp TSCEEEEEECGGGGT-CSSCEEEEEHHHHHHHHHHHHHHHHCTTSEEESEEEEEEEE-E--TT--EEEEEEEETTSCEEE
T ss_pred CCCEEeeccCCcccc-CCCCeeeeeHHHHHHHHHHHHHhhCCCcEEEECCEEEEEec-C--Cc--cEEEEecCCCCCceE
Confidence 2333 2222111111 1233567899999999988763 4 58999999999987 4 33 5566554 6 47
Q ss_pred EEccEEEecCCCchhhhhhhcCCC--CcccceeEEEEeeecCCCCCCccceeEEEe--cCeEEEEEEcCC
Q 044609 153 IKAKVLIGCDGVHSMVAQWLGLSE--SINSGRSSVRGLAVFPHGHGLNQDIRQFVG--VGFRAGFIPLND 218 (232)
Q Consensus 153 ~~a~~vV~A~G~~S~~r~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~p~~~ 218 (232)
+.||+||+|||.+|.+|+.++... +.+.+...|++....+... ......+++ ++.+++++|+++
T Consensus 156 ~~ad~vV~AdG~~S~vR~~l~~~~~~~~~~g~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~p~~~ 223 (410)
T 3c96_A 156 LGADVLVGADGIHSAVRAHLHPDQRPLSHGGITMWRGVTEFDRFL--DGKTMIVANDEHWSRLVAYPISA 223 (410)
T ss_dssp EEESEEEECCCTTCHHHHHHCTTCCCCEEEEEEEEEEEEEESCCT--TSSEEEEEECTTCCEEEEEECCH
T ss_pred EecCEEEECCCccchhHHHhcCCCCCCCcCCeeEEEeeccccccc--CCCeEEEecCCCCcEEEEEecCC
Confidence 999999999999999999986432 3344555666655443211 122233344 355688999863
No 12
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=99.95 E-value=1.5e-27 Score=198.54 Aligned_cols=211 Identities=21% Similarity=0.199 Sum_probs=145.9
Q ss_pred ccccEEEECCCHHHHHHHHHHHhCCCcEEEEecCCCCcCcceeeeecccHHHHHHHcCChHHHHhhccCceeeEEEEcCC
Q 044609 4 VEEDVVIIGAGIAGLATAVALRRLGIKALVLEKSDGLRATGAALTLSPNAWLALDALGVSHKLTSVYAPAKRVFVTNLGT 83 (232)
Q Consensus 4 ~~~dV~IvG~G~~G~~~A~~L~~~g~~v~viE~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~ 83 (232)
+++||+||||||+|+++|+.|+++|++|+||||.+.+...+++..+.+.+.++|+++|+++.+........... + .
T Consensus 48 ~~~DVvIVGaG~aGL~~A~~La~~G~~V~VlEr~~~~~~~~r~~~l~~~s~~~l~~lGl~~~l~~~~~~~~~~~--~--~ 123 (570)
T 3fmw_A 48 LTTDVVVVGGGPVGLMLAGELRAGGVGALVLEKLVEPVGHDRAGALHIRTVETLDLRGLLDRFLEGTQVAKGLP--F--A 123 (570)
T ss_dssp ---CEEEECCSHHHHHHHHHHHHTTCCEEEEBSCSSCCCSSSCCCBCHHHHHHHHTTTCHHHHTTSCCBCSBCC--B--T
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEcCCCCCCCCceEEEECHHHHHHHHHcCChHHHHhcCcccCCce--e--C
Confidence 46899999999999999999999999999999999888888999999999999999999999877655433110 0 1
Q ss_pred Cce-eEEeccCCCCCCCCceeeeehHHHHHHHhhhCC--CCeEEeCceEEEEEecCCCCCccEEEEe--CCC-cEEEccE
Q 044609 84 GAT-QELSYAGKSGRIGSGLRSVHRQSLLEALADELP--DDTIQFSSKIAAIDSQTLNGSSAAIINL--GDS-TIIKAKV 157 (232)
Q Consensus 84 ~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~--~~~i~~~~~v~~i~~~~~~g~~~~~v~~--~~g-~~~~a~~ 157 (232)
+.. ..+++...... .+....+++..+.+.|.+.+. +++++++++|++++.++ +. +.|++ .+| ++++||+
T Consensus 124 ~~~~~~~~~~~~~~~-~~~~~~i~~~~l~~~L~~~a~~~gv~i~~~~~v~~l~~~~---~~-v~v~~~~~~G~~~~~a~~ 198 (570)
T 3fmw_A 124 GIFTQGLDFGLVDTR-HPYTGLVPQSRTEALLAEHAREAGAEIPRGHEVTRLRQDA---EA-VEVTVAGPSGPYPVRARY 198 (570)
T ss_dssp TBCTTCCBGGGSCCS-CCSBBCCCHHHHHHHHHHHHHHHTEECCBSCEEEECCBCS---SC-EEEEEEETTEEEEEEESE
T ss_pred CcccccccccccCCC-CCeeEEeCHHHHHHHHHHHHHhCCCEEEeCCEEEEEEEcC---Ce-EEEEEEeCCCcEEEEeCE
Confidence 110 12222221111 223457899999999988775 78999999999998764 33 55666 788 6899999
Q ss_pred EEecCCCchhhhhhhcCCCCccc-ceeEEEEeeecCCCCCCcccee-EEEecCeEEEE-EEcCCCeE-EEEEEe
Q 044609 158 LIGCDGVHSMVAQWLGLSESINS-GRSSVRGLAVFPHGHGLNQDIR-QFVGVGFRAGF-IPLNDRDV-YWFLNR 227 (232)
Q Consensus 158 vV~A~G~~S~~r~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~-~p~~~~~~-~~~~~~ 227 (232)
||+|||.+|.+|+.++++.+... .+..+.+.+....+. ..+. .+...+. +++ +|++++.. ++++..
T Consensus 199 vV~ADG~~S~vR~~lGi~~~~~~~~~~~~~~~v~~~~~~---~~~~~~~~~~G~-~~~~~P~~~g~~~~i~~~~ 268 (570)
T 3fmw_A 199 GVGCDGGRSTVRRLAADRFPGTEATVRALIGYVTTPERE---VPRRWERTPDGI-LVLAFPPEGGLGPGWSSSS 268 (570)
T ss_dssp EEECSCSSCHHHHHTTCCCCCCCCCEEEEEEECCCCSCS---SCCCCCCCCSSC-EEECCCC------CEEEEE
T ss_pred EEEcCCCCchHHHHcCCCCccceeeeEEEEEEEEecCCC---cceEEEecCCEE-EEEEeecCCCeEEEEEEEe
Confidence 99999999999999998866543 444555444443322 1122 2334444 545 79998865 454443
No 13
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=99.95 E-value=5.4e-26 Score=187.71 Aligned_cols=223 Identities=15% Similarity=0.081 Sum_probs=153.4
Q ss_pred cccccEEEECCCHHHHHHHHHHHhCCCcEEEEecCCCCcCcceeeeecccHHH-HHHHcCChHHHHhhccCceeeEEEEc
Q 044609 3 MVEEDVVIIGAGIAGLATAVALRRLGIKALVLEKSDGLRATGAALTLSPNAWL-ALDALGVSHKLTSVYAPAKRVFVTNL 81 (232)
Q Consensus 3 ~~~~dV~IvG~G~~G~~~A~~L~~~g~~v~viE~~~~~~~~~~~~~~~~~~~~-~l~~~g~~~~~~~~~~~~~~~~~~~~ 81 (232)
++++||+|||||++|+++|+.|+++|++|+||||.+.+.. +.+..+.+.... .++.+|+.+.+...............
T Consensus 5 ~~~~dVvIVGgG~aGl~aA~~La~~G~~V~liE~~~~~~~-~~g~~~~~~~~~~~l~~lgl~~~~~~~~~~~~~~~~~~~ 83 (512)
T 3e1t_A 5 PEVFDLIVIGGGPGGSTLASFVAMRGHRVLLLEREAFPRH-QIGESLLPATVHGICAMLGLTDEMKRAGFPIKRGGTFRW 83 (512)
T ss_dssp CEEEEEEEECCSHHHHHHHHHHHTTTCCEEEECSSCSSCC-CSCCBCCHHHHTTHHHHTTCHHHHHTTTCCEECEEEEEC
T ss_pred CccCCEEEECcCHHHHHHHHHHHhCCCCEEEEccCCCCCC-CCCcccCcchHHHHHHHhCcHHHHHHcCCccccCceEEe
Confidence 4558999999999999999999999999999999975533 345566676554 88999999888776665544333322
Q ss_pred CCC-ceeEEeccCCCCCCCCceeeeehHHHHHHHhhhCC--CCeEEeCceEEEEEecCCCCCc-cEEEEeCCCc--EEEc
Q 044609 82 GTG-ATQELSYAGKSGRIGSGLRSVHRQSLLEALADELP--DDTIQFSSKIAAIDSQTLNGSS-AAIINLGDST--IIKA 155 (232)
Q Consensus 82 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~--~~~i~~~~~v~~i~~~~~~g~~-~~~v~~~~g~--~~~a 155 (232)
... ....+.+...........+.++|..+.+.|.+.+. +++++++++|+++..++ +.. .+.+...+|+ +++|
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~~~~V~~v~~~~--~~v~gv~~~~~dG~~~~i~a 161 (512)
T 3e1t_A 84 GKEPEPWTFGFTRHPDDPYGFAYQVERARFDDMLLRNSERKGVDVRERHEVIDVLFEG--ERAVGVRYRNTEGVELMAHA 161 (512)
T ss_dssp SSCSSCEEEESSSSSSSTTCCEEBCCHHHHHHHHHHHHHHTTCEEESSCEEEEEEEET--TEEEEEEEECSSSCEEEEEE
T ss_pred cCCccccccccccCCCCCcceeeEecHHHHHHHHHHHHHhCCCEEEcCCEEEEEEEEC--CEEEEEEEEeCCCCEEEEEc
Confidence 222 11233333221111344667999999999988764 89999999999999864 332 1445556674 8999
Q ss_pred cEEEecCCCchhhhhhhcCCC-CcccceeEEEEeeecCCC--CCCccceeEEEecCeEEEEEEcCCCeEEEEEEec
Q 044609 156 KVLIGCDGVHSMVAQWLGLSE-SINSGRSSVRGLAVFPHG--HGLNQDIRQFVGVGFRAGFIPLNDRDVYWFLNRY 228 (232)
Q Consensus 156 ~~vV~A~G~~S~~r~~~~~~~-~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~ 228 (232)
|+||+|||.+|.+|+.++... ..+....++.+++..... .+..........++.+++++|++++.+.+.++..
T Consensus 162 d~VI~AdG~~S~vr~~lg~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~Pl~~~~~~vg~~~~ 237 (512)
T 3e1t_A 162 RFIVDASGNRTRVSQAVGERVYSRFFQNVALYGYFENGKRLPAPRQGNILSAAFQDGWFWYIPLSDTLTSVGAVVS 237 (512)
T ss_dssp EEEEECCCTTCSSGGGTCCEEECSTTCEEEEEEEEESCCCCSTTCTTSEEEEEETTEEEEEEECSSSEEEEEEEEE
T ss_pred CEEEECCCcchHHHHHcCCCccCchhcceEEEEEecCCccCCCCCcCceEEEEeCCceEEEEEeCCCeEEEEEEec
Confidence 999999999999999997542 233455666665543221 1222233344445667999999999876666553
No 14
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=99.95 E-value=8.5e-26 Score=187.84 Aligned_cols=213 Identities=19% Similarity=0.271 Sum_probs=149.5
Q ss_pred ccccEEEECCCHHHHHHHHHHHhCCCcEEEEecCCCCcCcceeeeecccHHHHHHHcCChHHHHhhccCcee---eEEEE
Q 044609 4 VEEDVVIIGAGIAGLATAVALRRLGIKALVLEKSDGLRATGAALTLSPNAWLALDALGVSHKLTSVYAPAKR---VFVTN 80 (232)
Q Consensus 4 ~~~dV~IvG~G~~G~~~A~~L~~~g~~v~viE~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~---~~~~~ 80 (232)
+++||+||||||+|+++|+.|+++|++|+||||.+.+...+++..++++++++|+++|+.+.+.+...+... ..+..
T Consensus 25 ~~~dVlIVGaGpaGl~~A~~La~~G~~V~vlEr~~~~~~~~~~~~l~~~~~~~l~~lGl~~~~~~~~~~~~~~~~~~~~~ 104 (549)
T 2r0c_A 25 IETDVLILGGGPVGMALALDLAHRQVGHLVVEQTDGTITHPRVGTIGPRSMELFRRWGVAKQIRTAGWPGDHPLDAAWVT 104 (549)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCSCCSSCCCCEECHHHHHHHHHTTCHHHHHTSSCCTTSBCCEEEES
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCCCceeeeCHHHHHHHHHcCChHHHHhhcCCcccccceEEec
Confidence 458999999999999999999999999999999988877888999999999999999999998877665532 12221
Q ss_pred cCCCce-eEEeccCCCC-----CCCCceeeeehHHHHHHHhhhCCCCeEEeCceEEEEEecCCCCCccEEEEeCC---C-
Q 044609 81 LGTGAT-QELSYAGKSG-----RIGSGLRSVHRQSLLEALADELPDDTIQFSSKIAAIDSQTLNGSSAAIINLGD---S- 150 (232)
Q Consensus 81 ~~~~~~-~~~~~~~~~~-----~~~~~~~~~~~~~l~~~l~~~~~~~~i~~~~~v~~i~~~~~~g~~~~~v~~~~---g- 150 (232)
...+.. ..+++..... ..+.....+++..+.+.|.+.+... ++++++|++++.++ +. +.+++.+ |
T Consensus 105 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~a~~~-v~~~~~v~~~~~~~---~~-v~v~~~~~~~G~ 179 (549)
T 2r0c_A 105 RVGGHEVYRIPLGTADTRATPEHTPEPDAICPQHWLAPLLAEAVGER-LRTRSRLDSFEQRD---DH-VRATITDLRTGA 179 (549)
T ss_dssp SBTSCEEEEECCCBTTTSCCCSSCSSCCEECCHHHHHHHHHHHHGGG-EECSEEEEEEEECS---SC-EEEEEEETTTCC
T ss_pred cCCCceeEeecccccccccccCCCCCcccccCHHHHHHHHHHHHHHh-cccCcEEEEEEEeC---CE-EEEEEEECCCCC
Confidence 122322 3333321100 0123346788999999999887644 99999999998875 33 5555544 6
Q ss_pred -cEEEccEEEecCCCchhhhhhhcCCCCccc-ceeEEEEeeecCCCC---CCccceeEE-EecC-eEEEEEEcCCCeE
Q 044609 151 -TIIKAKVLIGCDGVHSMVAQWLGLSESINS-GRSSVRGLAVFPHGH---GLNQDIRQF-VGVG-FRAGFIPLNDRDV 221 (232)
Q Consensus 151 -~~~~a~~vV~A~G~~S~~r~~~~~~~~~~~-~~~~~~~~~~~~~~~---~~~~~~~~~-~~~~-~~~~~~p~~~~~~ 221 (232)
.+++||+||+|||.+|.+|+.++.+.+... .+..+.+.+..+... ...+.+.++ +.++ ..++++|++++..
T Consensus 180 ~~~i~a~~vVgADG~~S~vR~~lg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~p~~~~~~ 257 (549)
T 2r0c_A 180 TRAVHARYLVACDGASSPTRKALGIDAPPRHRTQVFRNILFRAPELRSLLGERAALFFFLMLSSSLRFPLRALDGRGL 257 (549)
T ss_dssp EEEEEEEEEEECCCTTCHHHHHHTCCCCBSSCCEEEEEEEEECTTHHHHHGGGCCSEEEEEEETTEEEEEEESSSSSE
T ss_pred EEEEEeCEEEECCCCCcHHHHHcCCCCCCCcccceEEEEEEECCchHHhcCCCCceEEEEECCCCcEEEEEEECCCcE
Confidence 479999999999999999999988766543 233333444433210 011223333 3444 5688999977543
No 15
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=99.95 E-value=2.6e-26 Score=183.69 Aligned_cols=215 Identities=17% Similarity=0.192 Sum_probs=138.6
Q ss_pred cccccEEEECCCHHHHHHHHHHHhCCCcEEEEecCCCCcCc-ceeeeecccHHHHHHHcCChHHHHhhccCceeeEEEEc
Q 044609 3 MVEEDVVIIGAGIAGLATAVALRRLGIKALVLEKSDGLRAT-GAALTLSPNAWLALDALGVSHKLTSVYAPAKRVFVTNL 81 (232)
Q Consensus 3 ~~~~dV~IvG~G~~G~~~A~~L~~~g~~v~viE~~~~~~~~-~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~ 81 (232)
|.+|||+||||||+|+++|+.|+++|++|+||||.+.++.. .++..+.+ ..++++++...............++..
T Consensus 2 Me~yDViIVGaGpaGl~~A~~La~~G~~V~v~Er~~~~~~~~~~g~~l~~---~~l~~l~~~~~~~~~~~~~~~~~~~~~ 78 (397)
T 3oz2_A 2 METYDVLVVGGGPGGSTAARYAAKYGLKTLMIEKRPEIGSPVRCGEGLSK---GILNEADIKADRSFIANEVKGARIYGP 78 (397)
T ss_dssp EEEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSTTCSCCSCCEEET---HHHHHTTCCCCTTTEEEEESEEEEECT
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCCCCCCCceecccCH---HHHHHcCCCchhhhhhcccceEEEEeC
Confidence 45699999999999999999999999999999998776432 23445554 466777765443333333444555443
Q ss_pred CCCceeEEeccCCCCCCCCceeeeehHHHHHHHhhhCC--CCeEEeCceEEEEEecCCCCCccEEEEe-CCC--cEEEcc
Q 044609 82 GTGATQELSYAGKSGRIGSGLRSVHRQSLLEALADELP--DDTIQFSSKIAAIDSQTLNGSSAAIINL-GDS--TIIKAK 156 (232)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~--~~~i~~~~~v~~i~~~~~~g~~~~~v~~-~~g--~~~~a~ 156 (232)
............ .. ....+.++|..+.+.|.+.+. |++++++++|+++..++ +.. ..+.. .++ .+++||
T Consensus 79 ~~~~~~~~~~~~-~~--~~~~~~i~R~~~~~~L~~~a~~~G~~~~~~~~v~~~~~~~--~~~-~~v~~~~~~~~~~~~a~ 152 (397)
T 3oz2_A 79 SEKRPIILQSEK-AG--NEVGYVLERDKFDKHLAALAAKAGADVWVKSPALGVIKEN--GKV-AGAKIRHNNEIVDVRAK 152 (397)
T ss_dssp TCSSCEEEECSS-SS--CCCEEEECHHHHHHHHHHHHHHHTCEEESSCCEEEEEEET--TEE-EEEEEEETTEEEEEEEE
T ss_pred CCceEeeccccc-cC--CceeEEEEHHHHHHHHHHHHHhcCcEEeeeeeeeeeeecc--cee-eeeeecccccceEEEEe
Confidence 322222222221 12 344678999999999988765 89999999999998765 343 33332 233 378999
Q ss_pred EEEecCCCchhhhhhhcCCCCcccceeEEEE-eeecCCCCCCccceeEEE----ecCeEEEEEEcCCCeEEEEEEe
Q 044609 157 VLIGCDGVHSMVAQWLGLSESINSGRSSVRG-LAVFPHGHGLNQDIRQFV----GVGFRAGFIPLNDRDVYWFLNR 227 (232)
Q Consensus 157 ~vV~A~G~~S~~r~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~----~~~~~~~~~p~~~~~~~~~~~~ 227 (232)
+||+|||.+|.+|+.++...+.......... ....... ..++.+..++ .++.+.+++|.+++.....+..
T Consensus 153 ~vIgAdG~~S~vr~~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~vg~~~ 227 (397)
T 3oz2_A 153 MVIAADGFESEFGRWAGLKSVILARNDIISALQYRMINV-DVDPDYTDFYLGSIAPAGYIWVFPKGEGMANVGIGS 227 (397)
T ss_dssp EEEECCCTTCHHHHHHTCGGGCCCGGGEEEEEEEEEESC-CCCTTEEEEECSTTSTTEEEEEEEEETTEEEEEEEE
T ss_pred EEEeCCccccHHHHHcCCCcccccceeeeeeEEEEeecc-ccCcccceeeeeccCCCceEEEeecccceeEEEEee
Confidence 9999999999999999876443322221111 1111111 1223333332 3456788899999876655543
No 16
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=99.95 E-value=1.8e-26 Score=184.97 Aligned_cols=215 Identities=17% Similarity=0.190 Sum_probs=144.0
Q ss_pred cccEEEECCCHHHHHHHHHHHhCCCcEEEEecCCCC--cCcceeeeecccHHHHHHHcCChHHHHhhccCceeeEEEEcC
Q 044609 5 EEDVVIIGAGIAGLATAVALRRLGIKALVLEKSDGL--RATGAALTLSPNAWLALDALGVSHKLTSVYAPAKRVFVTNLG 82 (232)
Q Consensus 5 ~~dV~IvG~G~~G~~~A~~L~~~g~~v~viE~~~~~--~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~ 82 (232)
++||+||||||+|+++|+.|++.|++|+|+||.+.+ ....++..+++++.+.|+++|+++.+.....+.....+++
T Consensus 2 ~~dV~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~~~~g~l~~~~~~~l~~lg~~~~~~~~~~~~~~~~~~~-- 79 (394)
T 1k0i_A 2 KTQVAIIGAGPSGLLLGQLLHKAGIDNVILERQTPDYVLGRIRAGVLEQGMVDLLREAGVDRRMARDGLVHEGVEIAF-- 79 (394)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHHTCCEEEECSSCHHHHHTCCCCCEECHHHHHHHHHTTCCHHHHHHCEEESCEEEEE--
T ss_pred CccEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCcccCCCceEeECHHHHHHHHHcCCcHHHHhcCCccceEEEEE--
Confidence 479999999999999999999999999999998753 1222333588999999999999999887766666665554
Q ss_pred CCceeEEeccCCCCCCCCceeeeehHHHHHHHhhhCC--CCeEEeCceEEEEEecCCCCCccEEEEe-CCCc--EEEccE
Q 044609 83 TGATQELSYAGKSGRIGSGLRSVHRQSLLEALADELP--DDTIQFSSKIAAIDSQTLNGSSAAIINL-GDST--IIKAKV 157 (232)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~--~~~i~~~~~v~~i~~~~~~g~~~~~v~~-~~g~--~~~a~~ 157 (232)
.+....+++..... ......+.+..+.+.|.+.+. +++++++++|++++.++ +.. +.|++ .+|+ +++||+
T Consensus 80 ~~~~~~~~~~~~~~--~~~~~~~~~~~l~~~L~~~~~~~g~~i~~~~~v~~i~~~~--~~~-~~v~~~~~g~~~~~~a~~ 154 (394)
T 1k0i_A 80 AGQRRRIDLKRLSG--GKTVTVYGQTEVTRDLMEAREACGATTVYQAAEVRLHDLQ--GER-PYVTFERDGERLRLDCDY 154 (394)
T ss_dssp TTEEEEECHHHHHT--SCCEEECCHHHHHHHHHHHHHHTTCEEESSCEEEEEECTT--SSS-CEEEEEETTEEEEEECSE
T ss_pred CCceEEeccccccC--CCceEEechHHHHHHHHHHHHhcCCeEEeceeEEEEEEec--CCc-eEEEEecCCcEEEEEeCE
Confidence 23233333322111 223456678888888877653 78999999999998753 233 55666 6776 799999
Q ss_pred EEecCCCchhhhhhhcCCC-Ccccce--eEEEEeeecCCCCCCccceeEEEecCeEEEEEEcCCCeEEEEEEec
Q 044609 158 LIGCDGVHSMVAQWLGLSE-SINSGR--SSVRGLAVFPHGHGLNQDIRQFVGVGFRAGFIPLNDRDVYWFLNRY 228 (232)
Q Consensus 158 vV~A~G~~S~~r~~~~~~~-~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~ 228 (232)
||+|||.+|.+|+.++... +.+... ..+.+....... ..+...+...++.+.++.|.+++..+|++...
T Consensus 155 vV~AdG~~S~vr~~l~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 226 (394)
T 1k0i_A 155 IAGCDGFHGISRQSIPAERLKVFERVYPFGWLGLLADTPP--VSHELIYANHPRGFALCSQRSATRSQYYVQVP 226 (394)
T ss_dssp EEECCCTTCSTGGGSCGGGCEEEEEEEEEEEEEEEESSCC--SCSSCEEECCTTCCEEEEEEETTEEEEEEEEC
T ss_pred EEECCCCCcHHHHhcCccccccccccccceeEEEecCCCC--CccceEEEEcCCceEEEEecCCCcEEEEEEeC
Confidence 9999999999999987542 222222 233333322111 11222223334444555565666666665543
No 17
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=99.95 E-value=1e-25 Score=190.22 Aligned_cols=221 Identities=15% Similarity=0.186 Sum_probs=153.9
Q ss_pred cccEEEECCCHHHHHHHHHHHh-CCCcEEEEecCCCCcCcceeeeecccHHHHHHHcCChHHHHhhccCceeeEEEEcC-
Q 044609 5 EEDVVIIGAGIAGLATAVALRR-LGIKALVLEKSDGLRATGAALTLSPNAWLALDALGVSHKLTSVYAPAKRVFVTNLG- 82 (232)
Q Consensus 5 ~~dV~IvG~G~~G~~~A~~L~~-~g~~v~viE~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~- 82 (232)
++||+||||||+|+++|+.|++ .|++|+||||.+.+...+++..++++++++|+++|+.+.+.....+.....++...
T Consensus 32 ~~dVlIVGaGpaGL~~A~~La~~~G~~V~viEr~~~~~~~g~a~~l~~~t~e~l~~lGl~~~~~~~~~~~~~~~~~~~~~ 111 (639)
T 2dkh_A 32 QVDVLIVGCGPAGLTLAAQLAAFPDIRTCIVEQKEGPMELGQADGIACRTMEMFEAFEFADSILKEACWINDVTFWKPDP 111 (639)
T ss_dssp EEEEEEECCSHHHHHHHHHHTTCTTSCEEEECSSSSCCSSCSCCEECHHHHHHHHHTTCHHHHHHHSEEECEEEEEEECT
T ss_pred CCcEEEECcCHHHHHHHHHHHHhCCCCEEEEeCCCCCCCCCceeeeCHHHHHHHHHcCcHHHHHHhcccccceEEECCCC
Confidence 5899999999999999999999 99999999999888778899999999999999999999988777666666555432
Q ss_pred --CCce-e--EEeccCCCCCCCCceeeeehHHHHHHHhhhCC--CC--eEEeCceEEEEEecCC-CCCccEEEEeC----
Q 044609 83 --TGAT-Q--ELSYAGKSGRIGSGLRSVHRQSLLEALADELP--DD--TIQFSSKIAAIDSQTL-NGSSAAIINLG---- 148 (232)
Q Consensus 83 --~~~~-~--~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~--~~--~i~~~~~v~~i~~~~~-~g~~~~~v~~~---- 148 (232)
.+.. . .++... .+........+++..+.+.|.+.+. ++ +++++++|++++.+++ ++.. +.|++.
T Consensus 112 ~~~g~~~~~~~~~~~~-~~~~~~~~~~i~q~~l~~~L~~~a~~~g~~v~v~~~~~v~~l~~~~~~~~~~-v~v~~~~~~~ 189 (639)
T 2dkh_A 112 GQPGRIARHGRVQDTE-DGLSEFPHVILNQARVHDHYLERMRNSPSRLEPHYARRVLDVKVDHGAADYP-VTVTLERCDA 189 (639)
T ss_dssp TSTTCEEEEEEEESSC-TTSCSSCEEECCHHHHHHHHHHHHHHSTTCCCCBCSEEEEEEEECTTCSSCC-EEEEEEECSG
T ss_pred CCCcceEeecccCccc-CCCCCCceEeeCHHHHHHHHHHHHHhCCCCcEEecCCEEEEEEECCCCCcCC-EEEEEEeccc
Confidence 1322 1 122111 1111233467889999999988764 44 8999999999988642 0223 556554
Q ss_pred --CC--cEEEccEEEecCCCchhhhhhhcCCCCcccceeEEEEeeec--CCCCCCccceeEEEecCeEEEEEEcCCC-eE
Q 044609 149 --DS--TIIKAKVLIGCDGVHSMVAQWLGLSESINSGRSSVRGLAVF--PHGHGLNQDIRQFVGVGFRAGFIPLNDR-DV 221 (232)
Q Consensus 149 --~g--~~~~a~~vV~A~G~~S~~r~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~p~~~~-~~ 221 (232)
+| .+++||+||+|||.+|.+|+.++.+.+.......| +.+.. ....+.......+..++.+++++|++++ .+
T Consensus 190 ~~~G~~~~i~a~~vVgADG~~S~vR~~lg~~~~g~~~~~~~-~~~~~~~~~~~p~~~~~~~~~~~~g~~~~~P~~~~~~~ 268 (639)
T 2dkh_A 190 AHAGQIETVQARYVVGCDGARSNVRRAIGRQLVGDSANQAW-GVMDVLAVTDFPDVRYKVAIQSEQGNVLIIPREGGHLV 268 (639)
T ss_dssp GGTTCEEEEEEEEEEECCCTTCHHHHHTTCCCEECSCSCCE-EEEEEEEEECCTTTTSEEEEEETTEEEEEEECTTSSCE
T ss_pred cCCCCeEEEEeCEEEECCCcchHHHHHhCCCCCCCCccceE-EEEEEEEccCCCccceeEEEEcCCceEEEEEcCCCcEE
Confidence 45 47999999999999999999999876554433333 22111 1111111112222225566889999998 55
Q ss_pred EEEEEec
Q 044609 222 YWFLNRY 228 (232)
Q Consensus 222 ~~~~~~~ 228 (232)
++++.+.
T Consensus 269 r~~~~~~ 275 (639)
T 2dkh_A 269 RFYVEMD 275 (639)
T ss_dssp EEEEECC
T ss_pred EEEEECC
Confidence 5555443
No 18
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=99.95 E-value=2e-25 Score=186.21 Aligned_cols=221 Identities=19% Similarity=0.180 Sum_probs=153.4
Q ss_pred cccccEEEECCCHHHHHHHHHHHhCCCcEEEEecCCCCcCcceeeeecccHHHHHHHcCChHHHHhhccCce-eeEEEEc
Q 044609 3 MVEEDVVIIGAGIAGLATAVALRRLGIKALVLEKSDGLRATGAALTLSPNAWLALDALGVSHKLTSVYAPAK-RVFVTNL 81 (232)
Q Consensus 3 ~~~~dV~IvG~G~~G~~~A~~L~~~g~~v~viE~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~-~~~~~~~ 81 (232)
|+++||+|||||++|+++|+.|+++|++|+|||+.+.+.. +.+..+.+.+.+.++.+|+++.+........ ...+.+.
T Consensus 21 M~~~DVvIVGgG~AGl~aA~~Lar~G~~V~LiEr~~~~~~-~~G~~l~p~~~~~l~~lGl~~~l~~~~~~~~~~~~~~~~ 99 (591)
T 3i3l_A 21 MTRSKVAIIGGGPAGSVAGLTLHKLGHDVTIYERSAFPRY-RVGESLLPGTMSILNRLGLQEKIDAQNYVKKPSATFLWG 99 (591)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCSSCC-CCCCBCCHHHHHHHHHTTCHHHHHHHCCEEECEEEEECS
T ss_pred CCCCCEEEECcCHHHHHHHHHHHcCCCCEEEEcCCCCCCC-ceeeeECHHHHHHHHHcCCcHHHHhcCCcccCCcEEEec
Confidence 3468999999999999999999999999999999876543 4578889999999999999988877654433 2333332
Q ss_pred CCCceeEEeccCCC--CCCCCceeeeehHHHHHHHhhhCC--CCeEEeCceEEEEEecCCCCCccEEEEeC-CC--cEEE
Q 044609 82 GTGATQELSYAGKS--GRIGSGLRSVHRQSLLEALADELP--DDTIQFSSKIAAIDSQTLNGSSAAIINLG-DS--TIIK 154 (232)
Q Consensus 82 ~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~~l~~~~~--~~~i~~~~~v~~i~~~~~~g~~~~~v~~~-~g--~~~~ 154 (232)
.......+.+.... ....+..+.+++..+.+.|.+.+. |++++++++|+++..++ +.. +.|.+. +| .++.
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~g~~V~~v~~~~--g~~-~~V~~~~~G~~~~i~ 176 (591)
T 3i3l_A 100 QDQAPWTFSFAAPKVAPWVFDHAVQVKREEFDKLLLDEARSRGITVHEETPVTDVDLSD--PDR-VVLTVRRGGESVTVE 176 (591)
T ss_dssp SSCCCEEEECCCC--CTTCCSCEEECCHHHHHHHHHHHHHHTTCEEETTCCEEEEECCS--TTC-EEEEEEETTEEEEEE
T ss_pred CCCccceeecccccccccccCeeEEEcHHHHHHHHHHHHHhCCCEEEeCCEEEEEEEcC--CCE-EEEEEecCCceEEEE
Confidence 22222333333211 111334678899999999988764 89999999999998764 454 777776 66 5799
Q ss_pred ccEEEecCCCchhhhhhhcCCCCcc-cceeEEEEeeecCCC--CCCccceeEEEecCeEEEEEEcCCCeEEEEEEe
Q 044609 155 AKVLIGCDGVHSMVAQWLGLSESIN-SGRSSVRGLAVFPHG--HGLNQDIRQFVGVGFRAGFIPLNDRDVYWFLNR 227 (232)
Q Consensus 155 a~~vV~A~G~~S~~r~~~~~~~~~~-~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 227 (232)
||+||+|||.+|.+|+.++.+.+.. ....++.+.+..... .+..........++.+++++|++++.+.+.+..
T Consensus 177 AdlVV~AdG~~S~lr~~lg~~~~~~~~~~~av~~~~~~~~~~~~~~~~~~~~~~~~~G~~w~iPl~~~~~sv~~~~ 252 (591)
T 3i3l_A 177 SDFVIDAGGSGGPISRKLGVRQYDEFYRNFAVWSYFKLKDPFEGDLKGTTYSITFEDGWVWMIPIKDDLYSVGLVV 252 (591)
T ss_dssp ESEEEECCGGGCHHHHHHTCEEEEEEEEEEEEEEEEECCCSCCSTTTTCEEEEEETTEEEEEEECSSSEEEEEEEE
T ss_pred cCEEEECCCCcchhHHHcCCCCCCccccceEEEEEEecCccccCCCCCceEEEEcCCcEEEEEECCCCeEEEEEEc
Confidence 9999999999999999998653322 222333333332221 122233334445666799999999876655544
No 19
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=99.95 E-value=2.2e-26 Score=185.15 Aligned_cols=181 Identities=23% Similarity=0.213 Sum_probs=128.8
Q ss_pred cEEEECCCHHHHHHHHHHHhCCCcEEEEecCCCCcC--cceeeeecccHHHHHHHcCChHHHHhhcc---CceeeEEEEc
Q 044609 7 DVVIIGAGIAGLATAVALRRLGIKALVLEKSDGLRA--TGAALTLSPNAWLALDALGVSHKLTSVYA---PAKRVFVTNL 81 (232)
Q Consensus 7 dV~IvG~G~~G~~~A~~L~~~g~~v~viE~~~~~~~--~~~~~~~~~~~~~~l~~~g~~~~~~~~~~---~~~~~~~~~~ 81 (232)
+|+||||||+||++|+.|+++|++|+|+||.+.+.. .|.++.+.++++++|+++|+.+.+..... ..........
T Consensus 3 ~V~IVGaGpaGl~~A~~L~~~G~~v~v~Er~~~~~~~~~G~~i~l~~~~~~~L~~lg~~~~~~~~~~~~~~~~~~~~~~~ 82 (412)
T 4hb9_A 3 HVGIIGAGIGGTCLAHGLRKHGIKVTIYERNSAASSILPGYGIHINSFGKQALQECLPAENWLAFEEASRYIGGQSRFYN 82 (412)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSSCSSCSSCCCCEEEECHHHHHHHHHHSCHHHHHHHHHHCEEECCCCEEEC
T ss_pred EEEEECcCHHHHHHHHHHHhCCCCEEEEecCCCCCcCCCceEEeeCHHHHHHHHHcCChHHHHHhhhhhcccCcceeEec
Confidence 699999999999999999999999999999987754 36788899999999999999877643221 1111111111
Q ss_pred CCCceeEEe--ccCC-CCCCCCceeeeehHHHHHHHhhhCCCCeEEeCceEEEEEecCCCCCccEEEEeCCCcEEEccEE
Q 044609 82 GTGATQELS--YAGK-SGRIGSGLRSVHRQSLLEALADELPDDTIQFSSKIAAIDSQTLNGSSAAIINLGDSTIIKAKVL 158 (232)
Q Consensus 82 ~~~~~~~~~--~~~~-~~~~~~~~~~~~~~~l~~~l~~~~~~~~i~~~~~v~~i~~~~~~g~~~~~v~~~~g~~~~a~~v 158 (232)
......... .... ..........++|..|.+.|.+.+ +.+++++++|++++..+ +.. +.|++.||++++||+|
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~R~~L~~~L~~~~-~~~v~~~~~v~~~~~~~--~~~-v~v~~~dG~~~~adlv 158 (412)
T 4hb9_A 83 ERMRLLAVHGGISPMAGKIISEQRLSISRTELKEILNKGL-ANTIQWNKTFVRYEHIE--NGG-IKIFFADGSHENVDVL 158 (412)
T ss_dssp TTSCEEEC--------------CEEEEEHHHHHHHHHTTC-TTTEECSCCEEEEEECT--TSC-EEEEETTSCEEEESEE
T ss_pred CCcceecccCCccccccccccccceEeeHHHHHHHHHhhc-cceEEEEEEEEeeeEcC--CCe-EEEEECCCCEEEeeEE
Confidence 122111110 0000 010133345789999999999887 45799999999998765 334 8899999999999999
Q ss_pred EecCCCchhhhhhhcCCC-CcccceeEEEEeeec
Q 044609 159 IGCDGVHSMVAQWLGLSE-SINSGRSSVRGLAVF 191 (232)
Q Consensus 159 V~A~G~~S~~r~~~~~~~-~~~~~~~~~~~~~~~ 191 (232)
|+|||.+|.+|+.++... +.+.+...+.+....
T Consensus 159 VgADG~~S~vR~~l~~~~~~~~~~~~~~~~~~~~ 192 (412)
T 4hb9_A 159 VGADGSNSKVRKQYLPFIERFDVGVSMIIGRARL 192 (412)
T ss_dssp EECCCTTCHHHHHHSTTCCCEEEEEEEEEEEEEC
T ss_pred EECCCCCcchHHHhCCCccccccceeEEEEEEec
Confidence 999999999999986553 334566666665443
No 20
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=99.94 E-value=3.6e-25 Score=177.35 Aligned_cols=215 Identities=16% Similarity=0.167 Sum_probs=140.5
Q ss_pred cccccEEEECCCHHHHHHHHHHHhCCCcEEEEecCCCCcC-cceeeeecccHHHHHHHcCChHHHHhhccCceeeEEEEc
Q 044609 3 MVEEDVVIIGAGIAGLATAVALRRLGIKALVLEKSDGLRA-TGAALTLSPNAWLALDALGVSHKLTSVYAPAKRVFVTNL 81 (232)
Q Consensus 3 ~~~~dV~IvG~G~~G~~~A~~L~~~g~~v~viE~~~~~~~-~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~ 81 (232)
|+++||+|||||++|+++|+.|+++|++|+|+||.+.++. ..++..+. .+.++++|+++.............+...
T Consensus 2 m~~~dVvIvG~G~aGl~~A~~La~~G~~V~l~E~~~~~g~~~~~~~~~~---~~~~~~lg~~~~~~~~~~~~~~~~~~~~ 78 (397)
T 3cgv_A 2 METYDVLVVGGGPGGSTAARYAAKYGLKTLMIEKRPEIGSPVRCGEGLS---KGILNEADIKADRSFIANEVKGARIYGP 78 (397)
T ss_dssp EEEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSTTCSCCSCCEEE---THHHHHTTCCCCTTTEEEEESEEEEECT
T ss_pred CccCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCCcccccccC---HHHHHHcCCCCChHHhhhhcceEEEEcC
Confidence 4569999999999999999999999999999999986543 23333333 3677888886543333334444555433
Q ss_pred CCCceeEEeccCCCCCCCCceeeeehHHHHHHHhhhCC--CCeEEeCceEEEEEecCCCCCccEEEEe---CCCcEEEcc
Q 044609 82 GTGATQELSYAGKSGRIGSGLRSVHRQSLLEALADELP--DDTIQFSSKIAAIDSQTLNGSSAAIINL---GDSTIIKAK 156 (232)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~--~~~i~~~~~v~~i~~~~~~g~~~~~v~~---~~g~~~~a~ 156 (232)
.......++..... ....+.++|..+.+.|.+.+. |++++++++|+++..++ +.. ..|.+ .++.+++||
T Consensus 79 ~~~~~~~~~~~~~~---~~~~~~~~~~~l~~~L~~~~~~~gv~i~~~~~v~~i~~~~--~~v-~gv~~~~~~~~~~~~a~ 152 (397)
T 3cgv_A 79 SEKRPIILQSEKAG---NEVGYVLERDKFDKHLAALAAKAGADVWVKSPALGVIKEN--GKV-AGAKIRHNNEIVDVRAK 152 (397)
T ss_dssp TCSSCEEEC--------CCCEEEECHHHHHHHHHHHHHHHTCEEESSCCEEEEEEET--TEE-EEEEEEETTEEEEEEEE
T ss_pred CCCEEEEEeccccC---CceeEEEeHHHHHHHHHHHHHhCCCEEEECCEEEEEEEeC--CEE-EEEEEEECCeEEEEEcC
Confidence 22211223222111 334678999999999988764 89999999999998864 342 22555 345689999
Q ss_pred EEEecCCCchhhhhhhcCCC-Cccccee--EEEEeeecCCCCCCccce-eEEE---ecCeEEEEEEcCCCeEEEEEEecC
Q 044609 157 VLIGCDGVHSMVAQWLGLSE-SINSGRS--SVRGLAVFPHGHGLNQDI-RQFV---GVGFRAGFIPLNDRDVYWFLNRYS 229 (232)
Q Consensus 157 ~vV~A~G~~S~~r~~~~~~~-~~~~~~~--~~~~~~~~~~~~~~~~~~-~~~~---~~~~~~~~~p~~~~~~~~~~~~~~ 229 (232)
+||+|||.+|.+|+.++.+. +...... .+...+.... .++.. ..++ .++.+++++|.+++...+.+....
T Consensus 153 ~vV~A~G~~s~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~g~~~~~P~~~~~~~vg~~~~~ 229 (397)
T 3cgv_A 153 MVIAADGFESEFGRWAGLKSVILARNDIISALQYRMINVD---VDPDYTDFYLGSIAPAGYIWVFPKGEGMANVGIGSSI 229 (397)
T ss_dssp EEEECCCTTCHHHHHHTCCTTCCCGGGEEEEEEEEEESCC---CCTTEEEEECSTTSTTEEEEEEEEETTEEEEEEEEET
T ss_pred EEEECCCcchHhHHhcCCCccCCChhheeEEEEEEeccCC---CCCCcEEEEeCCcCCCceEEEEECCCCeEEEEEEecc
Confidence 99999999999999998766 3222222 1222222221 12333 3333 456779999999998766665543
No 21
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=99.93 E-value=2.3e-24 Score=175.55 Aligned_cols=209 Identities=16% Similarity=0.106 Sum_probs=137.1
Q ss_pred ccccEEEECCCHHHHHHHHHHHhCCCcEEEEecCCCCc--CcceeeeecccHHHHHHHcCChHHHHh-hccCceeeEEEE
Q 044609 4 VEEDVVIIGAGIAGLATAVALRRLGIKALVLEKSDGLR--ATGAALTLSPNAWLALDALGVSHKLTS-VYAPAKRVFVTN 80 (232)
Q Consensus 4 ~~~dV~IvG~G~~G~~~A~~L~~~g~~v~viE~~~~~~--~~~~~~~~~~~~~~~l~~~g~~~~~~~-~~~~~~~~~~~~ 80 (232)
+++||+||||||+|+++|+.|+++|++|+|+||.+.+. ...++..+ +.+.++++|+...... ..........+.
T Consensus 5 ~~~dVvIVGaG~aGl~aA~~La~~G~~V~vlE~~~~~~~g~~~~g~~l---~~~~l~~lg~~~~~~~~~~~~~~~~~~~~ 81 (453)
T 3atr_A 5 LKYDVLIIGGGFAGSSAAYQLSRRGLKILLVDSKPWNRIGDKPCGDAV---SKAHFDKLGMPYPKGEELENKINGIKLYS 81 (453)
T ss_dssp EECSEEEECCSHHHHHHHHHHSSSSCCEEEECSSCGGGTTCSCCCCEE---EHHHHHHTTCCCCCGGGEEEEEEEEEEEC
T ss_pred CcCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCCcccccccc---cHHHHHHhcCCCCchHHHHhhhcceEEEC
Confidence 56999999999999999999999999999999987653 22233333 4577888887653221 111222222221
Q ss_pred cCCCceeEEeccCCCCCCCCceeeeehHHHHHHHhhhCC--CCeEEeCceEEEEEecCCCCCccEEEEeC---CCc--EE
Q 044609 81 LGTGATQELSYAGKSGRIGSGLRSVHRQSLLEALADELP--DDTIQFSSKIAAIDSQTLNGSSAAIINLG---DST--II 153 (232)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~--~~~i~~~~~v~~i~~~~~~g~~~~~v~~~---~g~--~~ 153 (232)
..+ ...+.+ +...+.++|..+.+.|.+.+. +++++++++|+++..++ +.. ..|.+. +|+ ++
T Consensus 82 -~~~-~~~~~~-------~~~~~~i~r~~l~~~L~~~a~~~gv~i~~~~~v~~i~~~~--~~v-~gv~~~~~~~G~~~~~ 149 (453)
T 3atr_A 82 -PDM-QTVWTV-------NGEGFELNAPLYNQRVLKEAQDRGVEIWDLTTAMKPIFED--GYV-KGAVLFNRRTNEELTV 149 (453)
T ss_dssp -TTS-SCEEEE-------EEEEEEECHHHHHHHHHHHHHHTTCEEESSEEEEEEEEET--TEE-EEEEEEETTTTEEEEE
T ss_pred -CCC-ceEEeE-------CCCcEEEcHHHHHHHHHHHHHHcCCEEEeCcEEEEEEEEC--CEE-EEEEEEEcCCCceEEE
Confidence 111 111221 112457899999999988764 79999999999998764 332 324443 665 79
Q ss_pred EccEEEecCCCchhhhhhhcCCCCc----c--cceeEEEEeeecCCCCCCcccee-EEEe----cCeEEEEEEcCCCeEE
Q 044609 154 KAKVLIGCDGVHSMVAQWLGLSESI----N--SGRSSVRGLAVFPHGHGLNQDIR-QFVG----VGFRAGFIPLNDRDVY 222 (232)
Q Consensus 154 ~a~~vV~A~G~~S~~r~~~~~~~~~----~--~~~~~~~~~~~~~~~~~~~~~~~-~~~~----~~~~~~~~p~~~~~~~ 222 (232)
+||+||+|||.+|.+|+.++...+. . ....++.+.+....+. .++.+. .+++ ++.+++++|.+++.++
T Consensus 150 ~ad~VV~AdG~~s~vr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~~~~P~~~~~~~ 228 (453)
T 3atr_A 150 YSKVVVEATGYSRSFRSKLPPELPITEDLDDKDADVAYREVLLTKEDI-EDHDYLRIFIDQETSPGGYWWYFPKGKNKVN 228 (453)
T ss_dssp ECSEEEECCGGGCTTGGGSCTTSGGGCCCCGGGEEEEEEEEEEESSCC-TTTTEEEEECCTTTSTTSCEEEEEEETTEEE
T ss_pred EcCEEEECcCCchhhHHhcCCCCCcccCCCcccceeeeEEEEecCCCc-cCCCeEEEEECCCCCCCcEEEEEECCCCeEE
Confidence 9999999999999999999765421 1 2244555555444322 133443 3432 4557889999998776
Q ss_pred EEEEec
Q 044609 223 WFLNRY 228 (232)
Q Consensus 223 ~~~~~~ 228 (232)
+.+...
T Consensus 229 vg~~~~ 234 (453)
T 3atr_A 229 VGLGIQ 234 (453)
T ss_dssp EEEEEE
T ss_pred EEEEec
Confidence 665543
No 22
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=99.91 E-value=1e-21 Score=162.77 Aligned_cols=216 Identities=14% Similarity=0.144 Sum_probs=139.0
Q ss_pred CCcccccEEEECCCHHHHHHHHHHHh------------CCCcEEEEecCCCCcCcceeeeecccHHHHHHHcCChHH--H
Q 044609 1 MEMVEEDVVIIGAGIAGLATAVALRR------------LGIKALVLEKSDGLRATGAALTLSPNAWLALDALGVSHK--L 66 (232)
Q Consensus 1 m~~~~~dV~IvG~G~~G~~~A~~L~~------------~g~~v~viE~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~--~ 66 (232)
|+++.+||+|||||++|+++|..|++ .|++|+|||+.+.+. .+.+..+.+++.+.++++|+.+. +
T Consensus 3 m~~~~~dVvIVGgG~aGl~aA~~La~~~~~~~~~~~~~~G~~V~liE~~~~~~-~g~g~~~~p~~~~~l~~lGi~e~~~~ 81 (526)
T 2pyx_A 3 MQKPITEIIIVGGGTAGWITAGLLAAEHNVDKGVLAHSPKLNITLIESPDVAT-IGVGEGTWPSMRSTLSKIGIDENDFI 81 (526)
T ss_dssp GGSCCCEEEEECCHHHHHHHHHHHHHHHHEETTEECSSCSCEEEEEECSSCCC-CCSCEECCTHHHHHHHHHTCCHHHHH
T ss_pred CCCCCCeEEEECCCHHHHHHHHHHHhhhccccccccCCCCCeEEEEeCCCCCC-cceeeechHhHHHHHHHcCCCHHHHH
Confidence 33456899999999999999999999 999999999976554 34478899999999999999886 4
Q ss_pred HhhccC-ceeeEEEEcCC------Cce--eEE---------ecc-------CC------------------------CC-
Q 044609 67 TSVYAP-AKRVFVTNLGT------GAT--QEL---------SYA-------GK------------------------SG- 96 (232)
Q Consensus 67 ~~~~~~-~~~~~~~~~~~------~~~--~~~---------~~~-------~~------------------------~~- 96 (232)
...... ..++.+..+.. +.. ..+ ++. .. .+
T Consensus 82 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~v~~q~~~~~~~~~~~~~~~~~ 161 (526)
T 2pyx_A 82 RQCDASFKQGSRFINWCKDPQSNVADSYLHPFSLPHGHQELDLCPYWLPHAEQVSFAEAVCSQQVLTQLGLAPKSIVTAQ 161 (526)
T ss_dssp HHTTCEEECEEEEESCSSCCBTTBCCEEEEESSCCTTTTTCCCHHHHGGGTTTSCHHHHHCSHHHHHHTTBCSSCTTSCT
T ss_pred HHcCCEEECCCcccCCCccccCCCCCceecCCCCCCCCCCCChhHHHHhhhhccCchhhcccccchhhhccchhhhhccc
Confidence 443322 22233221111 000 000 000 00 00
Q ss_pred --CCCCceeeeehHHHHHHHhhhC---CCCeEEeCceEEEEEecCCCCCccEEEEeCCCcEEEccEEEecCCCchhh-hh
Q 044609 97 --RIGSGLRSVHRQSLLEALADEL---PDDTIQFSSKIAAIDSQTLNGSSAAIINLGDSTIIKAKVLIGCDGVHSMV-AQ 170 (232)
Q Consensus 97 --~~~~~~~~~~~~~l~~~l~~~~---~~~~i~~~~~v~~i~~~~~~g~~~~~v~~~~g~~~~a~~vV~A~G~~S~~-r~ 170 (232)
......+.++|..+.+.|.+.+ .+++++++ +|+++..+++ +.. +.|.+.+|.+++||+||+|||.+|.+ ++
T Consensus 162 ~~~~~~~~~~~~r~~l~~~L~~~a~~~~Gv~i~~~-~v~~i~~~~~-g~~-~~v~~~~g~~i~ad~vV~AdG~~S~~~~~ 238 (526)
T 2pyx_A 162 YHFQNNYGYHLNAAKFSQLLTEHCTQKLGVTHIRD-HVSQIINNQH-GDI-EKLITKQNGEISGQLFIDCTGAKSLLLGE 238 (526)
T ss_dssp TCCSSCCEEEECHHHHHHHHHHHHHHTSCCEEEEC-CEEEEEECTT-SCE-EEEEESSSCEEECSEEEECSGGGCCCCCC
T ss_pred cCCCCCeeEEEcHHHHHHHHHHHHHhcCCCEEEEe-EEEEEEecCC-CcE-EEEEECCCCEEEcCEEEECCCcchHHHHH
Confidence 0012346789999999998765 37899999 6999987642 333 57788888789999999999999998 67
Q ss_pred hhcCCCCccc----ceeEEEEeeecCCC-CCCccceeEEEecCeEEEEEEcCCCe
Q 044609 171 WLGLSESINS----GRSSVRGLAVFPHG-HGLNQDIRQFVGVGFRAGFIPLNDRD 220 (232)
Q Consensus 171 ~~~~~~~~~~----~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~p~~~~~ 220 (232)
.++.+...+. ...++......... .+..+..........+++++|++++.
T Consensus 239 ~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~pl~~~~ 293 (526)
T 2pyx_A 239 HLQVPFLSQKSVLFNDRALAIQVPYSDANSPIASCTHSTAQPNGWIWDIGLPTRK 293 (526)
T ss_dssp CTCCCEEECHHHHCCCEEEEEEEECSSTTCCCCSSEEEEEETTEEEEEEECSSEE
T ss_pred HhCCCcccccccccCccEEEEEeeccCCCCCCCCceeEEecCCCeEEEeeCCCce
Confidence 7776542221 22233333332211 11122222234455568899998853
No 23
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=99.90 E-value=2.2e-21 Score=160.32 Aligned_cols=219 Identities=15% Similarity=0.084 Sum_probs=135.2
Q ss_pred cccEEEECCCHHHHHHHHHHHh---CCCcEEEEecCCCCcCcceeeeecccHHHHHHHcCChHH--HHhhccCce-eeEE
Q 044609 5 EEDVVIIGAGIAGLATAVALRR---LGIKALVLEKSDGLRATGAALTLSPNAWLALDALGVSHK--LTSVYAPAK-RVFV 78 (232)
Q Consensus 5 ~~dV~IvG~G~~G~~~A~~L~~---~g~~v~viE~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~--~~~~~~~~~-~~~~ 78 (232)
.+||+|||||++|+++|+.|++ .|++|+|||+.+.+ ..+.+..+.+...+.++.+|+.+. +........ ...+
T Consensus 2 ~~dVvIVGgG~aGl~~A~~La~~~~~G~~V~lvE~~~~~-~~~~g~~~~~~~~~~l~~lgi~~~~~~~~~~~~~~~~~~~ 80 (511)
T 2weu_A 2 IRSVVIVGGGTAGWMTASYLKAAFDDRIDVTLVESGNVR-RIGVGEATFSTVRHFFDYLGLDEREWLPRCAGGYKLGIRF 80 (511)
T ss_dssp CCEEEEECCHHHHHHHHHHHHHHHGGGSEEEEEEC--------CCEECCTTHHHHHHHHTCCHHHHHHHTTCEEECEEEE
T ss_pred cceEEEECCCHHHHHHHHHHHhhcCCCCEEEEEecCCCC-ceeeccccCcchHHHHHHcCCCHHHHHHHcCCeEecccee
Confidence 3699999999999999999999 99999999998644 344577788889999999999875 443332221 1111
Q ss_pred EEcCC-Cce--eEE-----------------------ec---------------------cCCC----C----------C
Q 044609 79 TNLGT-GAT--QEL-----------------------SY---------------------AGKS----G----------R 97 (232)
Q Consensus 79 ~~~~~-~~~--~~~-----------------------~~---------------------~~~~----~----------~ 97 (232)
..+.. +.. ..+ .+ .... . .
T Consensus 81 ~~w~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 160 (511)
T 2weu_A 81 ENWSEPGEYFYHPFERLRVVDGFNMAEWWLAVGDRRTSFSEACYLTHRLCEAKRAPRMLDGSLFASQVDESLGRSTLAEQ 160 (511)
T ss_dssp ESSSSTTCEEEEESCCCCEETTEEHHHHHHHHC----CHHHHHCHHHHHHHTTBCSBCTTSCBCC------CCSCCGGGC
T ss_pred cCCCCCCCceEcCCCCCCCCCCCchHHHHHhccccccCcccccccccCHHHhhhhHHhHhcCCccccccccccccccccC
Confidence 11100 000 000 00 0000 0 0
Q ss_pred C--CCceeeeehHHHHHHHhhhCC--CCeEEeCceEEEEEecCCCCCccEEEEeCCCcEEEccEEEecCCCchhhh-hhh
Q 044609 98 I--GSGLRSVHRQSLLEALADELP--DDTIQFSSKIAAIDSQTLNGSSAAIINLGDSTIIKAKVLIGCDGVHSMVA-QWL 172 (232)
Q Consensus 98 ~--~~~~~~~~~~~l~~~l~~~~~--~~~i~~~~~v~~i~~~~~~g~~~~~v~~~~g~~~~a~~vV~A~G~~S~~r-~~~ 172 (232)
. ....+.++|..+.+.|.+.+. |++++++ +|+++..+++ +.. +.|.+.+|+++.||+||+|||.+|.++ +.+
T Consensus 161 ~~~~~~~~~~~~~~l~~~L~~~a~~~gv~~~~~-~v~~i~~~~~-~~~-~~v~~~~g~~~~ad~vV~A~G~~S~~~~~~~ 237 (511)
T 2weu_A 161 RAQFPYAYHFDADEVARYLSEYAIARGVRHVVD-DVQHVGQDER-GWI-SGVHTKQHGEISGDLFVDCTGFRGLLINQTL 237 (511)
T ss_dssp CSCCSCEEEECHHHHHHHHHHHHHHTTCEEEEC-CEEEEEECTT-SCE-EEEEESSSCEEECSEEEECCGGGCCCCCCCT
T ss_pred cCCCCeeEEEcHHHHHHHHHHHHHHCCCEEEEC-eEeEEEEcCC-CCE-EEEEECCCCEEEcCEEEECCCcchHHHHHHh
Confidence 0 123567899999999988764 8899999 9999987542 444 678888888899999999999999984 566
Q ss_pred cCCCCc----ccceeEEEEeeecCCCCCCccceeEEEecCeEEEEEEcCCCeEEEEEEec
Q 044609 173 GLSESI----NSGRSSVRGLAVFPHGHGLNQDIRQFVGVGFRAGFIPLNDRDVYWFLNRY 228 (232)
Q Consensus 173 ~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~ 228 (232)
+.+... .+...++........+....+.......++.+++++|+++ ...+.+++.
T Consensus 238 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~P~~~-~~~~g~~~~ 296 (511)
T 2weu_A 238 GGRFQSFSDVLPNNRAVALRVPRENDEDMRPYTTATAMSAGWMWTIPLFK-RDGNGYVYS 296 (511)
T ss_dssp CCCEEECTTTCCCCEEEEEEEECSSGGGCCSSEEEEEETTEEEEEEECSS-EEEEEEEEC
T ss_pred CCCCccccccCcccceEEEEeccCCCCCCCcceeceecCCCcEEEEECCC-ceEEEEEEC
Confidence 765322 1222233322333222101222233345556789999988 444444443
No 24
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=99.89 E-value=1e-20 Score=158.11 Aligned_cols=160 Identities=26% Similarity=0.275 Sum_probs=108.8
Q ss_pred ccccEEEECCCHHHHHHHHHHHhC------CCcEEEEecCCCCcCc-ceeeeecccHHHHHHHcCChHHHHhhccCce--
Q 044609 4 VEEDVVIIGAGIAGLATAVALRRL------GIKALVLEKSDGLRAT-GAALTLSPNAWLALDALGVSHKLTSVYAPAK-- 74 (232)
Q Consensus 4 ~~~dV~IvG~G~~G~~~A~~L~~~------g~~v~viE~~~~~~~~-~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~-- 74 (232)
+++||+||||||+|+++|+.|++. |++|+||||.+.++.. .++..+.+++++.| + ..+...+.+..
T Consensus 34 ~~~DVvIVGaG~aGlaaA~~La~~~~~~~~G~~V~vlEk~~~~g~~~~~g~~l~~~~l~~l--l---~~~~~~g~~~~~~ 108 (584)
T 2gmh_A 34 EEADVVIVGAGPAGLSAATRLKQLAAQHEKDLRVCLVEKAAHIGAHTLSGACLDPRAFEEL--F---PDWKEKGAPLNTP 108 (584)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHHHHHTTCCCCEEEECSSSSTTTTCCCCCEECTHHHHHH--C---TTHHHHTCCCCEE
T ss_pred cCCCEEEECcCHHHHHHHHHHHhcccccCCCCcEEEEeCCCCCCCccccccccCHHHHHHH--H---HHHHhcCCceeee
Confidence 458999999999999999999998 9999999999876542 34556777766654 2 22222333322
Q ss_pred --eeEEEEcCCCceeEEec-cC-CCCCCCCceeeeehHHHHHHHhhhCC--CCeEEeCceEEEEEecCCCCCccEEEEeC
Q 044609 75 --RVFVTNLGTGATQELSY-AG-KSGRIGSGLRSVHRQSLLEALADELP--DDTIQFSSKIAAIDSQTLNGSSAAIINLG 148 (232)
Q Consensus 75 --~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~l~~~l~~~~~--~~~i~~~~~v~~i~~~~~~g~~~~~v~~~ 148 (232)
...+.+........+++ +. ... ....+.++|..|.++|.+.+. +++++++++|+++..+++ +.. +.|.+.
T Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~g~~v~~l~~~~~-g~V-~gV~~~ 184 (584)
T 2gmh_A 109 VTEDRFGILTEKYRIPVPILPGLPMN--NHGNYVVRLGHLVSWMGEQAEALGVEVYPGYAAAEILFHED-GSV-KGIATN 184 (584)
T ss_dssp CCEEEEEEECSSCEEECCCCTTSTTC--CTTCEECCHHHHHHHHHHHHHHTTCEEETTCCEEEEEECTT-SSE-EEEEEC
T ss_pred echhheeeeccCCCccccccCccccc--cCCCEEEeHHHHHHHHHHHHHHcCCEEEcCCEEEEEEEcCC-CCE-EEEEeC
Confidence 11122222211111221 11 111 233567899999999988764 799999999999987652 332 446665
Q ss_pred ------CC---------cEEEccEEEecCCCchhhhhhh
Q 044609 149 ------DS---------TIIKAKVLIGCDGVHSMVAQWL 172 (232)
Q Consensus 149 ------~g---------~~~~a~~vV~A~G~~S~~r~~~ 172 (232)
+| .+++||+||+|||.+|.+|+.+
T Consensus 185 ~~g~~~~G~~~~~~~~g~~i~Ad~VV~AdG~~S~vr~~l 223 (584)
T 2gmh_A 185 DVGIQKDGAPKTTFERGLELHAKVTIFAEGCHGHLAKQL 223 (584)
T ss_dssp CEEECTTSCEEEEEECCCEEECSEEEECCCTTCHHHHHH
T ss_pred CccccCCCCcccccCCceEEECCEEEEeeCCCchHHHHH
Confidence 33 5799999999999999998876
No 25
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=99.89 E-value=6.8e-21 Score=158.22 Aligned_cols=222 Identities=17% Similarity=0.122 Sum_probs=138.6
Q ss_pred CCcccccEEEECCCHHHHHHHHHHHh---CCCcEEEEecCCCCcCcceeeeecccHHH-HHHHcCChHH--HHhhccCce
Q 044609 1 MEMVEEDVVIIGAGIAGLATAVALRR---LGIKALVLEKSDGLRATGAALTLSPNAWL-ALDALGVSHK--LTSVYAPAK 74 (232)
Q Consensus 1 m~~~~~dV~IvG~G~~G~~~A~~L~~---~g~~v~viE~~~~~~~~~~~~~~~~~~~~-~l~~~g~~~~--~~~~~~~~~ 74 (232)
|++..+||+|||||++|+++|+.|++ .|++|+|||+...+. .+.+..+.+.... .++.+|+.+. +........
T Consensus 1 M~~~~~dVvIVGgG~aGl~aA~~La~~~~~G~~V~liE~~~~~~-~~~g~~~~~~~~~~~l~~lG~~~~~~~~~~~~~~~ 79 (538)
T 2aqj_A 1 MNKPIKNIVIVGGGTAGWMAASYLVRALQQQANITLIESAAIPR-IGVGEATIPSLQKVFFDFLGIPEREWMPQVNGAFK 79 (538)
T ss_dssp -CCBCCEEEEECCSHHHHHHHHHHHHHCCSSCEEEEEECSSSCC-CCSCEECCTHHHHHTHHHHTCCHHHHGGGGTCEEE
T ss_pred CCCCCCeEEEECCCHHHHHHHHHHHhhcCCCCEEEEECCCCCCC-cCCCcccchhHHHHHHHHhCCCHHHHHHhcCchhh
Confidence 66667899999999999999999999 999999999976443 3447788888888 9999998765 333222221
Q ss_pred -eeEEEEcCCC------ceeEEecc----------------C-----CCC------------------------CCCCce
Q 044609 75 -RVFVTNLGTG------ATQELSYA----------------G-----KSG------------------------RIGSGL 102 (232)
Q Consensus 75 -~~~~~~~~~~------~~~~~~~~----------------~-----~~~------------------------~~~~~~ 102 (232)
++.+..+... .....++. . ..+ +.....
T Consensus 80 ~g~~~~~w~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 159 (538)
T 2aqj_A 80 AAIKFVNWRKSPDPSRDDHFYHLFGNVPNCDGVPLTHYWLRKREQGFQQPMEYACYPQPGALDGKLAPCLSDGTRQMSHA 159 (538)
T ss_dssp CEEEEESCSSSCCTTSCCEEEEESSCCCEETTEEHHHHHHHHHHTTCCSCHHHHHCSCHHHHHTTBCSBCTTCCBCSCCE
T ss_pred CCccccCcCcccccCCCCceECCCCccCccccCchhHHHHHhcccccccCccccccccccHhhhccchHhhcCCcCCCcc
Confidence 1222111100 00000000 0 000 002335
Q ss_pred eeeehHHHHHHHhhhCC--CCeEEeCceEEEEEecCCCCCccEEEEeCCCcEEEccEEEecCCCchhhh-hhhcCCCCcc
Q 044609 103 RSVHRQSLLEALADELP--DDTIQFSSKIAAIDSQTLNGSSAAIINLGDSTIIKAKVLIGCDGVHSMVA-QWLGLSESIN 179 (232)
Q Consensus 103 ~~~~~~~l~~~l~~~~~--~~~i~~~~~v~~i~~~~~~g~~~~~v~~~~g~~~~a~~vV~A~G~~S~~r-~~~~~~~~~~ 179 (232)
+.+++..+.+.|.+.+. +++++++ +|+++..+++ +.. +.|.+.+|+++.||+||+|||.+|.+| +.++.....+
T Consensus 160 ~~i~~~~l~~~L~~~a~~~gv~~~~~-~v~~i~~~~~-g~~-~~v~~~~g~~i~ad~vV~A~G~~s~~~~~~lg~~~~~~ 236 (538)
T 2aqj_A 160 WHFDAHLVADFLKRWAVERGVNRVVD-EVVDVRLNNR-GYI-SNLLTKEGRTLEADLFIDCSGMRGLLINQALKEPFIDM 236 (538)
T ss_dssp EEECHHHHHHHHHHHHHHTTCEEEEC-CEEEEEECTT-SCE-EEEEETTSCEECCSEEEECCGGGCCCCCCCTCCCEEEC
T ss_pred EEEeHHHHHHHHHHHHHHCCCEEEEe-eEeEEEEcCC-CcE-EEEEECCCcEEEeCEEEECCCCchhhHHHHhCCCcccc
Confidence 67999999999988764 7899999 8999987542 333 678888888899999999999999984 4566543222
Q ss_pred c----ceeEEEEeeecCCCC-CCccceeEEEecCeEEEEEEcCCCeEEEEEEe
Q 044609 180 S----GRSSVRGLAVFPHGH-GLNQDIRQFVGVGFRAGFIPLNDRDVYWFLNR 227 (232)
Q Consensus 180 ~----~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 227 (232)
. ...++........+. ...+.......++.+++++|++++ ..+.+++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~p~~~~-~~~g~v~ 288 (538)
T 2aqj_A 237 SDYLLCDSAVASAVPNDDARDGVEPYTSSIAMNSGWTWKIPMLGR-FGSGYVF 288 (538)
T ss_dssp TTTCCCCEEEEEEEECCHHHHCCCSSEEEEECSSEEEEEEEETTE-EEEEEEE
T ss_pred ccccccceEEEEecccCCcccCCCCceeeeecCCceEEEecCCCc-eEEEEEE
Confidence 1 223333222221110 011222223445557889999885 3334444
No 26
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=99.88 E-value=1.6e-20 Score=156.25 Aligned_cols=222 Identities=14% Similarity=0.112 Sum_probs=139.7
Q ss_pred CCcccccEEEECCCHHHHHHHHHHHh---CCCcEEEEecCCCCcCcceeeeecccHHH-HHHHcCChHH--HHhhccCc-
Q 044609 1 MEMVEEDVVIIGAGIAGLATAVALRR---LGIKALVLEKSDGLRATGAALTLSPNAWL-ALDALGVSHK--LTSVYAPA- 73 (232)
Q Consensus 1 m~~~~~dV~IvG~G~~G~~~A~~L~~---~g~~v~viE~~~~~~~~~~~~~~~~~~~~-~l~~~g~~~~--~~~~~~~~- 73 (232)
|.+..+||+|||||++|+++|+.|++ .|++|+|||+.+.+. .+.+..+.+++.+ +++.+|+.+. +.......
T Consensus 21 M~~~~~dVvIVGgG~aGl~aA~~La~~~~~G~~V~liE~~~~~~-~~~g~~~~p~~~~~~l~~lGi~~~~~~~~~~~~~~ 99 (550)
T 2e4g_A 21 MSGKIDKILIVGGGTAGWMAASYLGKALQGTADITLLQAPDIPT-LGVGEATIPNLQTAFFDFLGIPEDEWMRECNASYK 99 (550)
T ss_dssp CCSCCCEEEEECCSHHHHHHHHHHHHHTTTSSEEEEEECCCCCC-CCCCEECCTHHHHHTHHHHTCCHHHHHHHTTCEEE
T ss_pred cCCCCCcEEEECCCHHHHHHHHHHHhhcCCCCcEEEEeCCCCCc-cceeeeechhHHHHHHHHhCCChHHHHHhcCCeEE
Confidence 54456899999999999999999999 999999999976543 3456788899999 9999999876 44332222
Q ss_pred eeeEEEEcCCC--------------ceeEEecc-----------------------C---------------C-------
Q 044609 74 KRVFVTNLGTG--------------ATQELSYA-----------------------G---------------K------- 94 (232)
Q Consensus 74 ~~~~~~~~~~~--------------~~~~~~~~-----------------------~---------------~------- 94 (232)
.+..+..+... .....++. . .
T Consensus 100 ~g~~~~~w~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (550)
T 2e4g_A 100 VAIKFINWRTAGEGTSEARELDGGPDHFYHSFGLLKYHEQIPLSHYWFDRSYRGKTVEPFDYACYKEPVILDANRSPRRL 179 (550)
T ss_dssp CEEEEESSSSCCCCCSSCCEETTEESEEEEESSCCCEETTEEHHHHHHHHHHTTSCCCCHHHHHCSHHHHHHTTBCSBCT
T ss_pred EeeeEeecccccccccccccccCCCCeeEecCCccCCCCcccHHHHHHhhcccccccccccccccchhhHHHhhhhhHhh
Confidence 12222211111 00000000 0 0
Q ss_pred CCC-CCCceeeeehHHHHHHHhhhCC---CCeEEeCceEEEEEecCCCCCccEEEEeCCCcEEEccEEEecCCCchhh-h
Q 044609 95 SGR-IGSGLRSVHRQSLLEALADELP---DDTIQFSSKIAAIDSQTLNGSSAAIINLGDSTIIKAKVLIGCDGVHSMV-A 169 (232)
Q Consensus 95 ~~~-~~~~~~~~~~~~l~~~l~~~~~---~~~i~~~~~v~~i~~~~~~g~~~~~v~~~~g~~~~a~~vV~A~G~~S~~-r 169 (232)
.+. .....+.+++..+.+.|.+.+. |++++++ +|+++..+++ +.. +.|.+.+|+++.||+||+|||.+|.+ +
T Consensus 180 ~~~~~~~~~~~~~~~~l~~~L~~~~~~~~Gv~i~~~-~V~~i~~~~~-g~~-~~v~~~~G~~i~ad~vI~A~G~~S~~~~ 256 (550)
T 2e4g_A 180 DGSKVTNYAWHFDAHLVADFLRRFATEKLGVRHVED-RVEHVQRDAN-GNI-ESVRTATGRVFDADLFVDCSGFRGLLIN 256 (550)
T ss_dssp TSCBCSCCEEEECHHHHHHHHHHHHHHHSCCEEEEC-CEEEEEECTT-SCE-EEEEETTSCEEECSEEEECCGGGCCCCC
T ss_pred cCCCCCCcceEEcHHHHHHHHHHHHHhcCCcEEEEC-eEeEEEEcCC-CCE-EEEEECCCCEEECCEEEECCCCchhhHH
Confidence 000 0223467899999999988763 7899999 9999987542 443 67888889889999999999999988 6
Q ss_pred hhhcCCCCcc----cceeEEEEeeecCCCC-CCccceeEEEecCeEEEEEEcCCCeEEEEEEe
Q 044609 170 QWLGLSESIN----SGRSSVRGLAVFPHGH-GLNQDIRQFVGVGFRAGFIPLNDRDVYWFLNR 227 (232)
Q Consensus 170 ~~~~~~~~~~----~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 227 (232)
+.++.....+ ....++........+. ...+.......++.+++++|+++. ....+++
T Consensus 257 ~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ipl~~~-~~~g~v~ 318 (550)
T 2e4g_A 257 KAMEEPFLDMSDHLLNDSAVATQVPHDDDANGVEPFTSAIAMKSGWTWKIPMLGR-FGTGYVY 318 (550)
T ss_dssp CCTCCCEEECTTTCCCCEEEEEEEECCHHHHCCCSSEEEEECSSEEEEEEECSSE-EEEEEEE
T ss_pred HHhCCCcccccccccccceEEEeecccCCcccCCCceeeeecCCceEEEccCCCc-cceEEEE
Confidence 6677653222 1122222222221110 011222233345566889999883 3344444
No 27
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=99.83 E-value=1.1e-20 Score=150.74 Aligned_cols=190 Identities=16% Similarity=0.109 Sum_probs=120.3
Q ss_pred ccEEEECCCHHHHHHHHHHHhC--CCcEEEEecCCCCcCcceeeeecccHHHHHHHcCCh-HH-HHhhccCceeeEEEEc
Q 044609 6 EDVVIIGAGIAGLATAVALRRL--GIKALVLEKSDGLRATGAALTLSPNAWLALDALGVS-HK-LTSVYAPAKRVFVTNL 81 (232)
Q Consensus 6 ~dV~IvG~G~~G~~~A~~L~~~--g~~v~viE~~~~~~~~~~~~~~~~~~~~~l~~~g~~-~~-~~~~~~~~~~~~~~~~ 81 (232)
.||+||||||+|+++|+.|+++ |++|+|+||.+.+...++++.+++++.+.+...++. +. +.....+.....+..
T Consensus 1 ~dV~IVGaG~aGl~~A~~L~~~~~G~~V~v~E~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 79 (381)
T 3c4a_A 1 MKILVIGAGPAGLVFASQLKQARPLWAIDIVEKNDEQEVLGWGVVLPGRPGQHPANPLSYLDAPERLNPQFLEDFKLVH- 79 (381)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSCTTCCCCSEEEEESCTTTCTTCGGGGSSCGGGGCCEEECCEEEEE-
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCCCCEEEEECCCCCCcceeEEEeCcHHHHhhcCcchhhhhhHHHhhccccceEEEe-
Confidence 3899999999999999999998 999999999988877788888888776622222222 22 322233333333333
Q ss_pred CCCceeEEeccCCCCCCCCceeeeehHHHHHHHhhhCC--CCeEEeCceEEEEEecCCCCCccEEEEeCCCcEEEccEEE
Q 044609 82 GTGATQELSYAGKSGRIGSGLRSVHRQSLLEALADELP--DDTIQFSSKIAAIDSQTLNGSSAAIINLGDSTIIKAKVLI 159 (232)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~--~~~i~~~~~v~~i~~~~~~g~~~~~v~~~~g~~~~a~~vV 159 (232)
.+... .. .. ......++|..+.+.|.+.++ +++++++++|++++.. .++.||+||
T Consensus 80 -~g~~~--~~--~~---~~~~~~~~r~~l~~~L~~~~~~~gv~i~~~~~v~~i~~~---------------~~~~ad~vV 136 (381)
T 3c4a_A 80 -HNEPS--LM--ST---GVLLCGVERRGLVHALRDKCRSQGIAIRFESPLLEHGEL---------------PLADYDLVV 136 (381)
T ss_dssp -SSSEE--EC--CC---CSCEEEEEHHHHHHHHHHHHHHTTCEEETTCCCCSGGGC---------------CGGGCSEEE
T ss_pred -CCeeE--Ee--cC---CCceeeecHHHHHHHHHHHHHHCCCEEEeCCEeccchhc---------------ccccCCEEE
Confidence 22221 11 11 222457899999999998764 7899999988776421 125799999
Q ss_pred ecCCCchhhhhhh----cCCCCcccceeEEEEeeecCCCCCCccceeEEEecCeE-EEEEEcCCCeEEE
Q 044609 160 GCDGVHSMVAQWL----GLSESINSGRSSVRGLAVFPHGHGLNQDIRQFVGVGFR-AGFIPLNDRDVYW 223 (232)
Q Consensus 160 ~A~G~~S~~r~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~p~~~~~~~~ 223 (232)
+|||.+|. |+.+ +...+...+..+|.+...... . ...+..+.+.+.. +.++|++++...+
T Consensus 137 ~AdG~~S~-R~~l~~~~g~~~~~~~~~~~~~~~~~~~~--~-~~~~~~~~~~g~~~~~~~p~~~~~~~~ 201 (381)
T 3c4a_A 137 LANGVNHK-TAHFTEALVPQVDYGRNKYIWYGTSQLFD--Q-MNLVFRTHGKDIFIAHAYKYSDTMSTF 201 (381)
T ss_dssp ECCGGGGG-TCCSSGGGCCCCEEEEEEEEEEEESSCCS--S-EEEEEEEETTEEEEEEEEECSSSCEEE
T ss_pred ECCCCCch-HHhhhhhcCCCcccCCccEEEEecCCCCC--c-ceeeEeeCCCcEEEEEEEEecCCeEEE
Confidence 99999999 9887 333333344555555432211 1 1111123334442 2368998877433
No 28
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=99.79 E-value=1.5e-18 Score=142.65 Aligned_cols=146 Identities=21% Similarity=0.240 Sum_probs=108.1
Q ss_pred ccccEEEECCCHHHHHHHHHHHhCCCcEEEEecCCCCcCcceeeeecccHHHHHHHcCChHHHHhhccCceeeEEEEcCC
Q 044609 4 VEEDVVIIGAGIAGLATAVALRRLGIKALVLEKSDGLRATGAALTLSPNAWLALDALGVSHKLTSVYAPAKRVFVTNLGT 83 (232)
Q Consensus 4 ~~~dV~IvG~G~~G~~~A~~L~~~g~~v~viE~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~ 83 (232)
..+||+|||||++|+++|..|++.|++|+|||+.+.++. .....+.+.+.+.++.+|+.+....
T Consensus 91 ~~~dVvIVGgG~aGl~aA~~La~~G~~V~liEk~~~~g~-~~~~~~~~~~~~~l~~~g~~~~~~~--------------- 154 (497)
T 2bry_A 91 TNTKCLVVGAGPCGLRAAVELALLGARVVLVEKRIKFSR-HNVLHLWPFTIHDLRALGAKKFYGR--------------- 154 (497)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCSSCCC-CCEEECCHHHHHHHHTTTHHHHCTT---------------
T ss_pred CCCCEEEECccHHHHHHHHHHHHCCCeEEEEEeccccCC-CCcccCChhHHHHHHHcCCcccccc---------------
Confidence 358999999999999999999999999999999877643 3456677888888888876542100
Q ss_pred CceeEEeccCCCCCCCCceeeeehHHHHHHHhhhCC--CCeEEeCceEEEEEecCCCCCccEEEEe--C-CC--cEEEcc
Q 044609 84 GATQELSYAGKSGRIGSGLRSVHRQSLLEALADELP--DDTIQFSSKIAAIDSQTLNGSSAAIINL--G-DS--TIIKAK 156 (232)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~--~~~i~~~~~v~~i~~~~~~g~~~~~v~~--~-~g--~~~~a~ 156 (232)
+. ......+.+..+.+.|.+.+. +++++++++|+++..+++++.. +.|.+ . +| .++.||
T Consensus 155 -------~~------~~~~~~~~~~~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~~~~~-~~v~~~~~~~g~~~~i~ad 220 (497)
T 2bry_A 155 -------FC------TGTLDHISIRQLQLLLLKVALLLGVEIHWGVKFTGLQPPPRKGSG-WRAQLQPNPPAQLASYEFD 220 (497)
T ss_dssp -------TT------CTTCCEEEHHHHHHHHHHHHHHTTCEEEESCEEEEEECCCSTTCC-BEEEEESCCCHHHHTCCBS
T ss_pred -------cc------ccccccCCHHHHHHHHHHHHHhCCCEEEeCCEEEEEEEecCCCCE-EEEEEEECCCCCEEEEEcC
Confidence 00 111225677888888877653 7999999999999875211333 56665 4 66 479999
Q ss_pred EEEecCCCchhhhhhhcCCCCcc
Q 044609 157 VLIGCDGVHSMVAQWLGLSESIN 179 (232)
Q Consensus 157 ~vV~A~G~~S~~r~~~~~~~~~~ 179 (232)
+||+|||.+|.+|+..+....+.
T Consensus 221 ~VV~A~G~~S~~r~~~~~~~~g~ 243 (497)
T 2bry_A 221 VLISAAGGKFVPEGFTIREMRGK 243 (497)
T ss_dssp EEEECCCTTCCCTTCEEEEEECS
T ss_pred EEEECCCCCcccccccchhhcCc
Confidence 99999999999988776554443
No 29
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=99.77 E-value=7.9e-17 Score=127.52 Aligned_cols=71 Identities=18% Similarity=0.346 Sum_probs=57.1
Q ss_pred eeeeehHHHHHHHhhhCC--CCeEEeCceEEEEEecCCCCCccEEEEeCCC--cEEEccEEEecCCCch-hhhhhh-cCC
Q 044609 102 LRSVHRQSLLEALADELP--DDTIQFSSKIAAIDSQTLNGSSAAIINLGDS--TIIKAKVLIGCDGVHS-MVAQWL-GLS 175 (232)
Q Consensus 102 ~~~~~~~~l~~~l~~~~~--~~~i~~~~~v~~i~~~~~~g~~~~~v~~~~g--~~~~a~~vV~A~G~~S-~~r~~~-~~~ 175 (232)
...++...+.+.|.+.+. |++++++++|++++.++ +.. +.|.+.+| .++.||.||+|+|.+| .+.+.+ |.+
T Consensus 144 ~~~~~~~~~~~~l~~~~~~~Gv~i~~~~~v~~i~~~~--~~~-~~v~~~~g~~~~~~a~~VV~A~G~~s~~l~~~~~g~~ 220 (369)
T 3dme_A 144 TGIVDSHALMLAYQGDAESDGAQLVFHTPLIAGRVRP--EGG-FELDFGGAEPMTLSCRVLINAAGLHAPGLARRIEGIP 220 (369)
T ss_dssp CEEECHHHHHHHHHHHHHHTTCEEECSCCEEEEEECT--TSS-EEEEECTTSCEEEEEEEEEECCGGGHHHHHHTEETSC
T ss_pred CEEECHHHHHHHHHHHHHHCCCEEECCCEEEEEEEcC--Cce-EEEEECCCceeEEEeCEEEECCCcchHHHHHHhcCCC
Confidence 346778888888887764 89999999999999875 333 66888888 3899999999999998 566777 765
No 30
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=99.76 E-value=1.4e-16 Score=124.68 Aligned_cols=189 Identities=14% Similarity=0.044 Sum_probs=103.8
Q ss_pred cccEEEECCCHHHHHHHHHHHhCCCcEEEEecCCCCcCcceee------------eec---ccHHHHHHHcCChHHHHhh
Q 044609 5 EEDVVIIGAGIAGLATAVALRRLGIKALVLEKSDGLRATGAAL------------TLS---PNAWLALDALGVSHKLTSV 69 (232)
Q Consensus 5 ~~dV~IvG~G~~G~~~A~~L~~~g~~v~viE~~~~~~~~~~~~------------~~~---~~~~~~l~~~g~~~~~~~~ 69 (232)
++||+|||||++|+++|+.|++.|++|+||||.+.++...... .+. +...+.++.+ ...
T Consensus 2 ~~dV~IIGaG~~Gl~~A~~L~~~G~~V~vlE~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~ 75 (336)
T 1yvv_A 2 TVPIAIIGTGIAGLSAAQALTAAGHQVHLFDKSRGSGGRMSSKRSDAGALDMGAQYFTARDRRFATAVKQW------QAQ 75 (336)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCEEEETTEEEECSCCCBCCCSHHHHHHHHHH------HHH
T ss_pred CceEEEECCcHHHHHHHHHHHHCCCcEEEEECCCCCcccceeEecCCCeEecCCCeEecCCHHHHHHHHHH------HhC
Confidence 4799999999999999999999999999999997653221110 111 1112222221 111
Q ss_pred c--cCceeeEEEEcCCCceeEEeccCCCCCCCCceeeeehHHHHHHHhhhCCCCeEEeCceEEEEEecCCCCCccEEEEe
Q 044609 70 Y--APAKRVFVTNLGTGATQELSYAGKSGRIGSGLRSVHRQSLLEALADELPDDTIQFSSKIAAIDSQTLNGSSAAIINL 147 (232)
Q Consensus 70 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~i~~~~~v~~i~~~~~~g~~~~~v~~ 147 (232)
. .......... ..+. +..................+.+.|.+ +++++++++|++++.++ +. +.|++
T Consensus 76 ~~~~~~~~~~~~~-~~~~-----~~~~~~~~~~~~~~~~~~~l~~~l~~---g~~i~~~~~v~~i~~~~---~~-~~v~~ 142 (336)
T 1yvv_A 76 GHVAEWTPLLYNF-HAGR-----LSPSPDEQVRWVGKPGMSAITRAMRG---DMPVSFSCRITEVFRGE---EH-WNLLD 142 (336)
T ss_dssp TSEEEECCCEEEE-SSSB-----CCCCCTTSCEEEESSCTHHHHHHHHT---TCCEECSCCEEEEEECS---SC-EEEEE
T ss_pred CCeeeccccceec-cCcc-----cccCCCCCccEEcCccHHHHHHHHHc---cCcEEecCEEEEEEEeC---CE-EEEEe
Confidence 1 1111111111 1110 00000000000111223456666655 67899999999998874 44 88889
Q ss_pred CCCcEEE-ccEEEecCCCchhhhhhhcCC-----CCcccceeEEEEeeecCCCCCCccceeEEEecCeEEEE
Q 044609 148 GDSTIIK-AKVLIGCDGVHSMVAQWLGLS-----ESINSGRSSVRGLAVFPHGHGLNQDIRQFVGVGFRAGF 213 (232)
Q Consensus 148 ~~g~~~~-a~~vV~A~G~~S~~r~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 213 (232)
.+|+... ||+||+|+|.+|..|.....+ .........+...+..+.+.. .+....++.+++..++
T Consensus 143 ~~g~~~~~a~~vV~a~g~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l 213 (336)
T 1yvv_A 143 AEGQNHGPFSHVIIATPAPQASTLLAAAPKLASVVAGVKMDPTWAVALAFETPLQ-TPMQGCFVQDSPLDWL 213 (336)
T ss_dssp TTSCEEEEESEEEECSCHHHHGGGGTTCHHHHHHHTTCCEEEEEEEEEEESSCCS-CCCCEEEECSSSEEEE
T ss_pred CCCcCccccCEEEEcCCHHHHHHhhccCHHHHHHHhhcCccceeEEEEEecCCCC-CCCCeEEeCCCceeEE
Confidence 9998664 999999999999887653321 011112234444455554432 2233445555554433
No 31
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=99.76 E-value=1.2e-16 Score=127.97 Aligned_cols=173 Identities=19% Similarity=0.181 Sum_probs=99.1
Q ss_pred CCcccccEEEECCCHHHHHHHHHHHhCCCcEEEEecCCCCcC---cceeee-e----ccc-H-HHHHHHcCChHHHHhh-
Q 044609 1 MEMVEEDVVIIGAGIAGLATAVALRRLGIKALVLEKSDGLRA---TGAALT-L----SPN-A-WLALDALGVSHKLTSV- 69 (232)
Q Consensus 1 m~~~~~dV~IvG~G~~G~~~A~~L~~~g~~v~viE~~~~~~~---~~~~~~-~----~~~-~-~~~l~~~g~~~~~~~~- 69 (232)
|+ +++||+|||||++|+++|+.|+++|++|+||||.+.... ++.... + ... . ....+.+.++..+.+.
T Consensus 1 M~-~~~DVvIIGaG~~Gl~~A~~La~~G~~V~vlE~~~~~~~~gas~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 79 (397)
T 2oln_A 1 MT-ESYDVVVVGGGPVGLATAWQVAERGHRVLVLERHTFFNENGGTSGAERHWRLQYTQEDLFRLTLETLPLWRALESRC 79 (397)
T ss_dssp ---CEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCTTCSSSSCCSSEEEECSCCSSHHHHHHHHHHHHHHHHHHHHH
T ss_pred CC-CcCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCCCCCCCCCCcCeEEEeccCcchhhhHHHHHHHHHHHHHHHh
Confidence 44 358999999999999999999999999999999876531 111111 1 000 0 0011112222222211
Q ss_pred ccCc---eeeEEEEcCCC------------------ce-eEEe-------ccCC------CCCCCCceeeeehHHHHHHH
Q 044609 70 YAPA---KRVFVTNLGTG------------------AT-QELS-------YAGK------SGRIGSGLRSVHRQSLLEAL 114 (232)
Q Consensus 70 ~~~~---~~~~~~~~~~~------------------~~-~~~~-------~~~~------~~~~~~~~~~~~~~~l~~~l 114 (232)
.... .+......... .. ..++ ++.. .+.+.+....+++..+.+.|
T Consensus 80 ~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~~g~~~~~~~~~~l 159 (397)
T 2oln_A 80 ERRLIHEIGSLWFGDTDVVTNEGQISGTAAMMDKLSVRYEWLKATDIERRFGFRGLPRDYEGFLQPDGGTIDVRGTLAAL 159 (397)
T ss_dssp TCCCEECCCEEEEECSSCCBTTBCHHHHHHHHHHTTCCCEEEEHHHHHHHHCCCSCCTTCEEEEETTCEEEEHHHHHHHH
T ss_pred CccHHHHCCcEEEcCCCccchhHHHHHHHHHHHHcCCCceecCHHHHHhhCcCccCCCceeEEEcCCCCEEcHHHHHHHH
Confidence 1110 01111111110 00 0000 0000 00011233467778888888
Q ss_pred hhhCC--CCeEEeCceEEEEEecCCCCCccEEEEeCCCcEEEccEEEecCCCch-hhhhhhcCCCCcc
Q 044609 115 ADELP--DDTIQFSSKIAAIDSQTLNGSSAAIINLGDSTIIKAKVLIGCDGVHS-MVAQWLGLSESIN 179 (232)
Q Consensus 115 ~~~~~--~~~i~~~~~v~~i~~~~~~g~~~~~v~~~~g~~~~a~~vV~A~G~~S-~~r~~~~~~~~~~ 179 (232)
.+.+. +++++++++|++++.++ .. +.|.+.++ +++||.||+|+|.+| .+++.++...|..
T Consensus 160 ~~~a~~~Gv~i~~~~~V~~i~~~~---~~-v~v~t~~g-~i~a~~VV~A~G~~s~~l~~~~g~~~p~~ 222 (397)
T 2oln_A 160 FTLAQAAGATLRAGETVTELVPDA---DG-VSVTTDRG-TYRAGKVVLACGPYTNDLLEPLGARLAYS 222 (397)
T ss_dssp HHHHHHTTCEEEESCCEEEEEEET---TE-EEEEESSC-EEEEEEEEECCGGGHHHHHGGGTCCCCEE
T ss_pred HHHHHHcCCEEECCCEEEEEEEcC---Ce-EEEEECCC-EEEcCEEEEcCCcChHHHhhhcCCCCCee
Confidence 77653 79999999999998764 34 66777665 699999999999995 5777777655543
No 32
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=99.76 E-value=2.1e-17 Score=132.57 Aligned_cols=117 Identities=10% Similarity=-0.008 Sum_probs=76.5
Q ss_pred eeeeehHHHHHHHhhhCC--CCeEEeCceEEEEEecCCCCCccEEEEeCCCcEEEccEEEecCCCch-hhhhhhcCCCCc
Q 044609 102 LRSVHRQSLLEALADELP--DDTIQFSSKIAAIDSQTLNGSSAAIINLGDSTIIKAKVLIGCDGVHS-MVAQWLGLSESI 178 (232)
Q Consensus 102 ~~~~~~~~l~~~l~~~~~--~~~i~~~~~v~~i~~~~~~g~~~~~v~~~~g~~~~a~~vV~A~G~~S-~~r~~~~~~~~~ 178 (232)
...++...+.+.|.+.+. +++++++++|+++..++ +.. +.|.+.+| ++.||.||+|+|.+| .+++.++...+.
T Consensus 168 ~~~~~~~~~~~~l~~~~~~~g~~i~~~~~v~~i~~~~--~~~-~~v~~~~g-~~~a~~vV~a~G~~s~~l~~~~g~~~~~ 243 (405)
T 2gag_B 168 AGIAKHDHVAWAFARKANEMGVDIIQNCEVTGFIKDG--EKV-TGVKTTRG-TIHAGKVALAGAGHSSVLAEMAGFELPI 243 (405)
T ss_dssp CBBCCHHHHHHHHHHHHHHTTCEEECSCCEEEEEESS--SBE-EEEEETTC-CEEEEEEEECCGGGHHHHHHHHTCCCCE
T ss_pred CccCCHHHHHHHHHHHHHHCCCEEEcCCeEEEEEEeC--CEE-EEEEeCCc-eEECCEEEECCchhHHHHHHHcCCCCCc
Confidence 345667788888877664 89999999999998764 444 67888887 699999999999998 678888876655
Q ss_pred ccceeEEEEeeecCCCCCCccceeEEEecCeEEEEEEcCCCeEEEEEEe
Q 044609 179 NSGRSSVRGLAVFPHGHGLNQDIRQFVGVGFRAGFIPLNDRDVYWFLNR 227 (232)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 227 (232)
......+........ ... ..++..+..+++.|.+++.+.+....
T Consensus 244 ~~~~~~~~~~~~~~~--~~~---~~~~~~~~~~y~~p~~~g~~~ig~~~ 287 (405)
T 2gag_B 244 QSHPLQALVSELFEP--VHP---TVVMSNHIHVYVSQAHKGELVMGAGI 287 (405)
T ss_dssp EEEEEEEEEEEEBCS--CCC---SEEEETTTTEEEEECTTSEEEEEEEE
T ss_pred cccceeEEEecCCcc--ccC---ceEEeCCCcEEEEEcCCCcEEEEecc
Confidence 433222221111111 111 12233334467789888876665443
No 33
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=99.75 E-value=8.3e-18 Score=136.39 Aligned_cols=62 Identities=16% Similarity=0.136 Sum_probs=51.7
Q ss_pred eeeehHHHHHHHhhhCC--CCeEEeCc---eEEEEEecCCCCCccEEEEeCCCcEEEccEEEecCCCchh
Q 044609 103 RSVHRQSLLEALADELP--DDTIQFSS---KIAAIDSQTLNGSSAAIINLGDSTIIKAKVLIGCDGVHSM 167 (232)
Q Consensus 103 ~~~~~~~l~~~l~~~~~--~~~i~~~~---~v~~i~~~~~~g~~~~~v~~~~g~~~~a~~vV~A~G~~S~ 167 (232)
..++...+.+.|.+.+. |+++++++ +|+++..++ +.. ..|.+.+|+++.||.||+|+|.+|.
T Consensus 156 g~~~~~~~~~~L~~~a~~~Gv~i~~~t~~~~V~~i~~~~--~~v-~gV~t~~G~~i~Ad~VV~AtG~~s~ 222 (438)
T 3dje_A 156 GWAHARNALVAAAREAQRMGVKFVTGTPQGRVVTLIFEN--NDV-KGAVTADGKIWRAERTFLCAGASAG 222 (438)
T ss_dssp EEECHHHHHHHHHHHHHHTTCEEEESTTTTCEEEEEEET--TEE-EEEEETTTEEEECSEEEECCGGGGG
T ss_pred EEecHHHHHHHHHHHHHhcCCEEEeCCcCceEEEEEecC--CeE-EEEEECCCCEEECCEEEECCCCChh
Confidence 57778888988887764 89999999 999998764 342 4489999988999999999999984
No 34
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=99.74 E-value=5.1e-17 Score=129.42 Aligned_cols=74 Identities=9% Similarity=0.134 Sum_probs=57.6
Q ss_pred eeeeehHHHHHHHhhhCC--CCeEEeCceEEEEEecCCCCCccEE-EEeCCCcEEEccEEEecCCCch-hhhhhhcCC--
Q 044609 102 LRSVHRQSLLEALADELP--DDTIQFSSKIAAIDSQTLNGSSAAI-INLGDSTIIKAKVLIGCDGVHS-MVAQWLGLS-- 175 (232)
Q Consensus 102 ~~~~~~~~l~~~l~~~~~--~~~i~~~~~v~~i~~~~~~g~~~~~-v~~~~g~~~~a~~vV~A~G~~S-~~r~~~~~~-- 175 (232)
...+++..+.+.|.+.+. +++++++++|+++..++ +. +. |.+.+| +++||.||+|+|.+| .+.+.++..
T Consensus 143 ~~~~~~~~l~~~l~~~~~~~Gv~i~~~~~v~~i~~~~--~~--v~gv~~~~g-~i~a~~VV~A~G~~s~~l~~~~g~~~~ 217 (382)
T 1y56_B 143 DGKADPFEATTAFAVKAKEYGAKLLEYTEVKGFLIEN--NE--IKGVKTNKG-IIKTGIVVNATNAWANLINAMAGIKTK 217 (382)
T ss_dssp CCEECHHHHHHHHHHHHHHTTCEEECSCCEEEEEESS--SB--EEEEEETTE-EEECSEEEECCGGGHHHHHHHHTCCSC
T ss_pred CeeECHHHHHHHHHHHHHHCCCEEECCceEEEEEEEC--CE--EEEEEECCc-EEECCEEEECcchhHHHHHHHcCCCcC
Confidence 345778888888887664 79999999999998764 33 44 888777 799999999999998 567777765
Q ss_pred CCccc
Q 044609 176 ESINS 180 (232)
Q Consensus 176 ~~~~~ 180 (232)
.|..+
T Consensus 218 ~~~~~ 222 (382)
T 1y56_B 218 IPIEP 222 (382)
T ss_dssp CCCEE
T ss_pred cCCCe
Confidence 55443
No 35
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=99.74 E-value=4.1e-17 Score=131.03 Aligned_cols=153 Identities=22% Similarity=0.283 Sum_probs=93.2
Q ss_pred CCcccccEEEECCCHHHHHHHHHHHhCCCcEEEEecCCCCcCc----ceee---ee---cc---------cHHHHHHHcC
Q 044609 1 MEMVEEDVVIIGAGIAGLATAVALRRLGIKALVLEKSDGLRAT----GAAL---TL---SP---------NAWLALDALG 61 (232)
Q Consensus 1 m~~~~~dV~IvG~G~~G~~~A~~L~~~g~~v~viE~~~~~~~~----~~~~---~~---~~---------~~~~~l~~~g 61 (232)
|.++++||+|||||++|+++|+.|+++|++|+|+|+.+.++.. +.+. .. .+ .....+.++.
T Consensus 23 M~~~~~dViIIGgG~AGl~aA~~La~~G~~V~llEk~~~~g~~~~~sGgg~~n~t~~~~~~~~~~~~~~~~~~~~l~~~~ 102 (417)
T 3v76_A 23 MVAEKQDVVIIGAGAAGMMCAIEAGKRGRRVLVIDHARAPGEKIRISGGGRCNFTNIHASPRNFLSGNPHFCKSALARYR 102 (417)
T ss_dssp -----CCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHSGGGTCEEEETTCSGGGEEESSTTTTHHHHHHSC
T ss_pred ccCCCCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCCCCceeEEcCCCceeccCCCCCHHHHhhcCHHHHHHHHHhcC
Confidence 4456789999999999999999999999999999999876321 1110 00 00 0112233332
Q ss_pred ChHHHHhhccCceeeEEEEcCCCceeEEeccCCCCCCCCceeeeehHHHHHHHhhhCC--CCeEEeCceEEEEEecCCCC
Q 044609 62 VSHKLTSVYAPAKRVFVTNLGTGATQELSYAGKSGRIGSGLRSVHRQSLLEALADELP--DDTIQFSSKIAAIDSQTLNG 139 (232)
Q Consensus 62 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~--~~~i~~~~~v~~i~~~~~~g 139 (232)
..+.+.. ... .+........+ .......+..+.+.|.+.+. +++++++++|+++..++
T Consensus 103 ~~~~~~~-~~~-~Gi~~~~~~~g---------------~~~~~~~~~~l~~~L~~~l~~~Gv~i~~~~~V~~i~~~~--- 162 (417)
T 3v76_A 103 PQDFVAL-VER-HGIGWHEKTLG---------------QLFCDHSAKDIIRMLMAEMKEAGVQLRLETSIGEVERTA--- 162 (417)
T ss_dssp HHHHHHH-HHH-TTCCEEECSTT---------------EEEESSCHHHHHHHHHHHHHHHTCEEECSCCEEEEEEET---
T ss_pred HHHHHHH-HHH-cCCCcEEeeCC---------------EEeeCCCHHHHHHHHHHHHHHCCCEEEECCEEEEEEEeC---
Confidence 1111100 000 00111111111 00112345677777777664 89999999999998764
Q ss_pred CccEEEEeCCCcEEEccEEEecCCCch-----------hhhhhhcCC
Q 044609 140 SSAAIINLGDSTIIKAKVLIGCDGVHS-----------MVAQWLGLS 175 (232)
Q Consensus 140 ~~~~~v~~~~g~~~~a~~vV~A~G~~S-----------~~r~~~~~~ 175 (232)
.. +.|.+.+| ++.||.||+|+|.+| .+.+.+|..
T Consensus 163 ~~-~~V~~~~g-~i~ad~VIlAtG~~S~p~~gs~g~g~~la~~~G~~ 207 (417)
T 3v76_A 163 SG-FRVTTSAG-TVDAASLVVASGGKSIPKMGATGLAYRIAEQFGLP 207 (417)
T ss_dssp TE-EEEEETTE-EEEESEEEECCCCSSCGGGTCCCHHHHHHHHTTCC
T ss_pred CE-EEEEECCc-EEEeeEEEECCCCccCCCCCCCcHHHHHHHHCCCC
Confidence 44 78888888 799999999999998 356666654
No 36
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=99.74 E-value=1.5e-17 Score=138.50 Aligned_cols=172 Identities=15% Similarity=0.058 Sum_probs=95.4
Q ss_pred CCcccccEEEECCCHHHHHHHHHHHhCCCcEEEEecCCCCc-CcceeeeecccHHHHHHHcCC--h-H------HHHhhc
Q 044609 1 MEMVEEDVVIIGAGIAGLATAVALRRLGIKALVLEKSDGLR-ATGAALTLSPNAWLALDALGV--S-H------KLTSVY 70 (232)
Q Consensus 1 m~~~~~dV~IvG~G~~G~~~A~~L~~~g~~v~viE~~~~~~-~~~~~~~~~~~~~~~l~~~g~--~-~------~~~~~~ 70 (232)
|.+.++||+|||||++|+++|+.|+++|++|+|+||.+... .+++...+...+.+.++.++. . + .+....
T Consensus 14 m~~~~~DVvVIGgGi~Gl~~A~~La~~G~~V~LlEk~d~~~GtS~~ss~lihgG~ryl~~~~~~l~~e~~~e~~~l~~~a 93 (561)
T 3da1_A 14 MSEKQLDLLVIGGGITGAGIALDAQVRGIQTGLVEMNDFASGTSSRSTKLVHGGLRYLKQFEIKLVAEVGKERAIVYENA 93 (561)
T ss_dssp HTTSCEEEEEECCSHHHHHHHHHHHTTTCCEEEEESSSTTCSGGGSSCCEECC---------------CHHHHHHHHHHC
T ss_pred ccCCCCCEEEECCCHHHHHHHHHHHhCCCcEEEEECCCCCCCcccCCcCccccchHHHHhcCHHHHHHHHHHHHHHHHhC
Confidence 34456999999999999999999999999999999986542 222222232233333322111 0 0 000000
Q ss_pred cCce-e---------------------eEEEEcCCCce-----eEEe-------ccCCCC-----CCCCceeeeehHHHH
Q 044609 71 APAK-R---------------------VFVTNLGTGAT-----QELS-------YAGKSG-----RIGSGLRSVHRQSLL 111 (232)
Q Consensus 71 ~~~~-~---------------------~~~~~~~~~~~-----~~~~-------~~~~~~-----~~~~~~~~~~~~~l~ 111 (232)
..+. . ...+....+.. ..++ ++.... ...+....++...+.
T Consensus 94 p~l~~~~~~~~p~~~~~~~~~~~~~~g~~~~d~l~~~~~~~~~~~l~~~~~~~~~P~l~~~~~~gg~~~~dg~vd~~~l~ 173 (561)
T 3da1_A 94 PHVTTPEWMLLPIFKDGTFGKFSTSLGLKVYDYLADVRKDERRYMLNEKQTLEKEPLLRKENLKGGGIYVEYRTDDARLT 173 (561)
T ss_dssp TTTCEEEEEEEEECC---------------------------CEEECHHHHHHHCTTSCCTTCCEEEEEEEEECCHHHHH
T ss_pred chhccccceeEeecCCccHHHHHHHhHHHHHHHhhcccCCCCcEEECHHHHHHhCccCChhhceeEEEecCceEcHHHHH
Confidence 0000 0 00000000000 0000 000000 001112356778888
Q ss_pred HHHhhhCC--CCeEEeCceEEEEEecCCCCCccEEEEeCC---C--cEEEccEEEecCCCch-hhhhhhcCC
Q 044609 112 EALADELP--DDTIQFSSKIAAIDSQTLNGSSAAIINLGD---S--TIIKAKVLIGCDGVHS-MVAQWLGLS 175 (232)
Q Consensus 112 ~~l~~~~~--~~~i~~~~~v~~i~~~~~~g~~~~~v~~~~---g--~~~~a~~vV~A~G~~S-~~r~~~~~~ 175 (232)
..|.+.+. |++++.+++|+++..++ +.. +.|.+.+ | .+++||.||+|+|.|| .+++.++..
T Consensus 174 ~~L~~~a~~~G~~i~~~~~V~~l~~~~--g~v-~gV~~~d~~tg~~~~i~A~~VV~AaG~~s~~l~~~~g~~ 242 (561)
T 3da1_A 174 LEIMKEAVARGAVALNYMKVESFIYDQ--GKV-VGVVAKDRLTDTTHTIYAKKVVNAAGPWVDTLREKDRSK 242 (561)
T ss_dssp HHHHHHHHHTTCEEEESEEEEEEEEET--TEE-EEEEEEETTTCCEEEEEEEEEEECCGGGHHHHHHTTTCC
T ss_pred HHHHHHHHHcCCEEEcCCEEEEEEEcC--CeE-EEEEEEEcCCCceEEEECCEEEECCCcchHHHHHhcCCC
Confidence 88887663 89999999999998864 443 5565543 3 3799999999999998 677777754
No 37
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=99.73 E-value=3.3e-17 Score=130.38 Aligned_cols=69 Identities=12% Similarity=0.171 Sum_probs=57.0
Q ss_pred eeeeehHHHHHHHhhhCC--CCeEEeCceEEEEEecCCCCCccEEEEeCCCcEEEccEEEecCCCch-hhhhhhcCC
Q 044609 102 LRSVHRQSLLEALADELP--DDTIQFSSKIAAIDSQTLNGSSAAIINLGDSTIIKAKVLIGCDGVHS-MVAQWLGLS 175 (232)
Q Consensus 102 ~~~~~~~~l~~~l~~~~~--~~~i~~~~~v~~i~~~~~~g~~~~~v~~~~g~~~~a~~vV~A~G~~S-~~r~~~~~~ 175 (232)
...++...+.+.|.+.+. |++++++++|+++..++ .. +.|.+.+| ++.||.||+|+|.+| .+.+.++..
T Consensus 148 ~~~~~~~~~~~~l~~~a~~~Gv~i~~~~~V~~i~~~~---~~-~~V~t~~g-~i~a~~VV~A~G~~s~~l~~~~g~~ 219 (381)
T 3nyc_A 148 GADIDTDALHQGYLRGIRRNQGQVLCNHEALEIRRVD---GA-WEVRCDAG-SYRAAVLVNAAGAWCDAIAGLAGVR 219 (381)
T ss_dssp CEEECHHHHHHHHHHHHHHTTCEEESSCCCCEEEEET---TE-EEEECSSE-EEEESEEEECCGGGHHHHHHHHTCC
T ss_pred CceECHHHHHHHHHHHHHHCCCEEEcCCEEEEEEEeC---Ce-EEEEeCCC-EEEcCEEEECCChhHHHHHHHhCCC
Confidence 456788899998888764 89999999999998864 44 78888887 799999999999998 566777765
No 38
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=99.73 E-value=3.6e-16 Score=124.76 Aligned_cols=170 Identities=18% Similarity=0.218 Sum_probs=98.3
Q ss_pred ccccEEEECCCHHHHHHHHHHHhCCCcEEEEecCCCCc--Ccc-e--eee---ecc--cHHH-HHHHcCChHHHHhhcc-
Q 044609 4 VEEDVVIIGAGIAGLATAVALRRLGIKALVLEKSDGLR--ATG-A--ALT---LSP--NAWL-ALDALGVSHKLTSVYA- 71 (232)
Q Consensus 4 ~~~dV~IvG~G~~G~~~A~~L~~~g~~v~viE~~~~~~--~~~-~--~~~---~~~--~~~~-~l~~~g~~~~~~~~~~- 71 (232)
+++||+|||||++|+++|+.|+++|++|+|||+..... ..+ . ++. +.. ...+ ..+.+..+..+.+...
T Consensus 2 ~~~dvvIIGaG~~Gl~~A~~La~~G~~V~vie~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~ 81 (389)
T 2gf3_A 2 THFDVIVVGAGSMGMAAGYQLAKQGVKTLLVDAFDPPHTNGSHHGDTRIIRHAYGEGREYVPLALRSQELWYELEKETHH 81 (389)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCSSCSSSSSCSSEEEECSSCTTCGGGHHHHHHHHHHHHHHHHHCSS
T ss_pred CcCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCCCCCCCCCCcchhhhhhhcCCchHHHHHHHHHHHHHHHHHHhCC
Confidence 46899999999999999999999999999999987653 111 1 111 100 1111 1111112222222110
Q ss_pred C---ceeeEEEEcC-C--------------Cce-eEEe-------ccCCC------CCCCCceeeeehHHHHHHHhhhCC
Q 044609 72 P---AKRVFVTNLG-T--------------GAT-QELS-------YAGKS------GRIGSGLRSVHRQSLLEALADELP 119 (232)
Q Consensus 72 ~---~~~~~~~~~~-~--------------~~~-~~~~-------~~~~~------~~~~~~~~~~~~~~l~~~l~~~~~ 119 (232)
. ..+....... . +.. ..++ ++... +.+.+....+++..+.+.|.+.+.
T Consensus 82 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 161 (389)
T 2gf3_A 82 KIFTKTGVLVFGPKGESAFVAETMEAAKEHSLTVDLLEGDEINKRWPGITVPENYNAIFEPNSGVLFSENCIRAYRELAE 161 (389)
T ss_dssp CCEECCCEEEEEETTCCHHHHHHHHHHHHTTCCCEEEETHHHHHHSTTCCCCTTEEEEEETTCEEEEHHHHHHHHHHHHH
T ss_pred cceeecceEEEcCCCchHHHHHHHHHHHHcCCCcEEcCHHHHHHhCCCcccCCCceEEEeCCCcEEeHHHHHHHHHHHHH
Confidence 0 0111111111 0 000 0000 01000 001122346778888888888764
Q ss_pred --CCeEEeCceEEEEEecCCCCCccEEEEeCCCcEEEccEEEecCCCchh-hhhhhcCCCCc
Q 044609 120 --DDTIQFSSKIAAIDSQTLNGSSAAIINLGDSTIIKAKVLIGCDGVHSM-VAQWLGLSESI 178 (232)
Q Consensus 120 --~~~i~~~~~v~~i~~~~~~g~~~~~v~~~~g~~~~a~~vV~A~G~~S~-~r~~~~~~~~~ 178 (232)
+++++++++|++++.++ .. +.|.+.+| +++||.||+|+|.+|. +.+.++...+.
T Consensus 162 ~~Gv~i~~~~~v~~i~~~~---~~-~~v~~~~g-~~~a~~vV~A~G~~~~~l~~~~g~~~pl 218 (389)
T 2gf3_A 162 ARGAKVLTHTRVEDFDISP---DS-VKIETANG-SYTADKLIVSMGAWNSKLLSKLNLDIPL 218 (389)
T ss_dssp HTTCEEECSCCEEEEEECS---SC-EEEEETTE-EEEEEEEEECCGGGHHHHGGGGTEECCC
T ss_pred HCCCEEEcCcEEEEEEecC---Ce-EEEEeCCC-EEEeCEEEEecCccHHHHhhhhccCCce
Confidence 78999999999998864 33 67777766 6999999999999984 45555543443
No 39
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=99.71 E-value=7.7e-17 Score=129.44 Aligned_cols=169 Identities=18% Similarity=0.143 Sum_probs=93.4
Q ss_pred ccccEEEECCCHHHHHHHHHHHhC--CCcEEEEecCCCCcCc-ce--eeee-cccH------HHHHHHcCChHHHHhh--
Q 044609 4 VEEDVVIIGAGIAGLATAVALRRL--GIKALVLEKSDGLRAT-GA--ALTL-SPNA------WLALDALGVSHKLTSV-- 69 (232)
Q Consensus 4 ~~~dV~IvG~G~~G~~~A~~L~~~--g~~v~viE~~~~~~~~-~~--~~~~-~~~~------~~~l~~~g~~~~~~~~-- 69 (232)
.++||+|||||++|+++|+.|+++ |++|+|||+....... ++ +..+ .+.. ....+.+.++......
T Consensus 35 ~~~dVvIIGaGi~Gls~A~~La~~~pG~~V~vlE~~~~~~~~s~~~~g~~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 114 (405)
T 3c4n_A 35 EAFDIVVIGAGRMGAACAFYLRQLAPGRSLLLVEEGGLPNEEGATILAPGVWTAQDIPAGQEAQAEWTREQLLGALGSGK 114 (405)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSCSSCTTSHHHHCCCEECGGGCCTTCHHHHHHHHHHHHTGGGSSC
T ss_pred CcCCEEEECCcHHHHHHHHHHHhcCCCCeEEEEeCCCCCCcchhccCCcceeecccCCchHHHHHHHHHHHHHHHhCCCC
Confidence 358999999999999999999999 9999999998654322 11 2112 1110 0011111111110000
Q ss_pred ccCce--eeEEEEcCCCceeEEec----------------cC-CCCCCCCceeeeehHHHHHHHhhhCC--CCeEEeCce
Q 044609 70 YAPAK--RVFVTNLGTGATQELSY----------------AG-KSGRIGSGLRSVHRQSLLEALADELP--DDTIQFSSK 128 (232)
Q Consensus 70 ~~~~~--~~~~~~~~~~~~~~~~~----------------~~-~~~~~~~~~~~~~~~~l~~~l~~~~~--~~~i~~~~~ 128 (232)
...+. +.............++. .. ..+.+.+....+++..+.+.|.+.+. +++++++++
T Consensus 115 ~~~~~~~g~l~~~~~~~~~g~l~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~g~v~~~~l~~~L~~~~~~~Gv~i~~~~~ 194 (405)
T 3c4n_A 115 TLEVEDRPLLHLLPAGEGSGLTPTLDALADFPEALALLDPARLPVARVDPRALTYRPGSLALLAAQQAIGQGAGLLLNTR 194 (405)
T ss_dssp CCCEEECCEEEEESSCCSSSCEEHHHHTTTCHHHHTTSCTTTSCEEEEETTCEEECHHHHHHHHHHHHHTTTCEEECSCE
T ss_pred CCcEEeeCeEEehhhHhHCCCCCHHHHHHhCCCccccccCCcceEEEEcCCCEEEcHHHHHHHHHHHHHHCCCEEEcCCE
Confidence 01111 11000000000000000 00 00001223446788889998887764 789999999
Q ss_pred EE---------EEEecCCCCCccEEEEeCCCcEEEccEEEecCCCch-hhhh-hhcCCCC
Q 044609 129 IA---------AIDSQTLNGSSAAIINLGDSTIIKAKVLIGCDGVHS-MVAQ-WLGLSES 177 (232)
Q Consensus 129 v~---------~i~~~~~~g~~~~~v~~~~g~~~~a~~vV~A~G~~S-~~r~-~~~~~~~ 177 (232)
|+ ++..++ .. +.|.+.+| +++||.||+|+|.+| .+++ .++...+
T Consensus 195 v~~~~g~~~~~~i~~~~---~~-v~v~~~~g-~i~a~~VV~A~G~~s~~l~~~~~g~~~~ 249 (405)
T 3c4n_A 195 AELVPGGVRLHRLTVTN---TH-QIVVHETR-QIRAGVIIVAAGAAGPALVEQGLGLHTR 249 (405)
T ss_dssp EEEETTEEEEECBCC-----------CBCCE-EEEEEEEEECCGGGHHHHHHHHHCCCCC
T ss_pred EEeccccccccceEeeC---Ce-EEEEECCc-EEECCEEEECCCccHHHHHHHhcCCCCC
Confidence 99 886653 33 56666666 799999999999999 6777 7877654
No 40
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=99.71 E-value=2.1e-16 Score=125.84 Aligned_cols=110 Identities=12% Similarity=0.029 Sum_probs=71.8
Q ss_pred eeeehHHHHHHHhhhCC--CCeEEeCceEEEEEecCCCCCccEEEEeCCCcEEEccEEEecCCCchh-hhhhhcCCCCcc
Q 044609 103 RSVHRQSLLEALADELP--DDTIQFSSKIAAIDSQTLNGSSAAIINLGDSTIIKAKVLIGCDGVHSM-VAQWLGLSESIN 179 (232)
Q Consensus 103 ~~~~~~~l~~~l~~~~~--~~~i~~~~~v~~i~~~~~~g~~~~~v~~~~g~~~~a~~vV~A~G~~S~-~r~~~~~~~~~~ 179 (232)
..+++..+.+.|.+.+. +++++++++|+++..++ .. +.|.+.+| ++.||.||+|+|.+|. +.+.++...+..
T Consensus 159 ~~~~~~~~~~~l~~~~~~~g~~i~~~~~v~~i~~~~---~~-~~v~~~~g-~~~a~~vV~A~G~~s~~l~~~~~~~~~~~ 233 (382)
T 1ryi_A 159 VHVEPYFVCKAYVKAAKMLGAEIFEHTPVLHVERDG---EA-LFIKTPSG-DVWANHVVVASGVWSGMFFKQLGLNNAFL 233 (382)
T ss_dssp CBCCHHHHHHHHHHHHHHTTCEEETTCCCCEEECSS---SS-EEEEETTE-EEEEEEEEECCGGGTHHHHHHTTCCCCCE
T ss_pred eEEcHHHHHHHHHHHHHHCCCEEEcCCcEEEEEEEC---CE-EEEEcCCc-eEEcCEEEECCChhHHHHHHhcCCCCcee
Confidence 45677888888887764 78999999999998764 33 67777777 7999999999999986 777777654433
Q ss_pred cceeEEEEeeecCCCCCCccceeEEEecCeEEEEEEcCCCeEEEE
Q 044609 180 SGRSSVRGLAVFPHGHGLNQDIRQFVGVGFRAGFIPLNDRDVYWF 224 (232)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 224 (232)
+...... .+..+.. .. . . .++.+ ..+++|.+++.+.+.
T Consensus 234 ~~~g~~~-~~~~~~~-~~-~-~-~~~~~--~~~~~p~~~g~~~vG 271 (382)
T 1ryi_A 234 PVKGECL-SVWNDDI-PL-T-K-TLYHD--HCYIVPRKSGRLVVG 271 (382)
T ss_dssp EEEEEEE-EEECCSS-CC-C-S-EEEET--TEEEEECTTSEEEEE
T ss_pred ccceEEE-EECCCCC-Cc-c-c-eEEcC--CEEEEEcCCCeEEEe
Confidence 3222221 1222211 11 1 1 22333 256789888765443
No 41
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=99.70 E-value=2.8e-16 Score=127.70 Aligned_cols=164 Identities=20% Similarity=0.260 Sum_probs=94.1
Q ss_pred cccccEEEECCCHHHHHHHHHHHhCCCcEEEEecCCCCcC----cceeeeecc---cHHHHHHHcCChHHHHhh----cc
Q 044609 3 MVEEDVVIIGAGIAGLATAVALRRLGIKALVLEKSDGLRA----TGAALTLSP---NAWLALDALGVSHKLTSV----YA 71 (232)
Q Consensus 3 ~~~~dV~IvG~G~~G~~~A~~L~~~g~~v~viE~~~~~~~----~~~~~~~~~---~~~~~l~~~g~~~~~~~~----~~ 71 (232)
.+++||+|||||++|+++|+.|+++|.+|+||||.+.++. ++.+..... .....++.++....+... ..
T Consensus 24 ~~~~dVvIIGgG~aGl~aA~~la~~G~~V~llEk~~~~g~~~~~sg~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 103 (447)
T 2i0z_A 24 AMHYDVIVIGGGPSGLMAAIGAAEEGANVLLLDKGNKLGRKLAISGGGRCNVTNRLPLDEIVKHIPGNGRFLYSAFSIFN 103 (447)
T ss_dssp -CCCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHTGGGTCCCEECSCHHHHHHTCTBTGGGGHHHHHHSC
T ss_pred cCCCCEEEECCcHHHHHHHHHHHHCCCCEEEEECCCCCCceeEEeCCCceeccCcccHHHHHHHhccChHHHHHHHHhcC
Confidence 3568999999999999999999999999999999876531 111111000 011222222111110000 00
Q ss_pred CceeeEEEEcCCCceeEEeccCCCCCCCCceeeeehHHHHHHHhhhCC--CCeEEeCceEEEEEecCCCCCccEEEEeCC
Q 044609 72 PAKRVFVTNLGTGATQELSYAGKSGRIGSGLRSVHRQSLLEALADELP--DDTIQFSSKIAAIDSQTLNGSSAAIINLGD 149 (232)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~--~~~i~~~~~v~~i~~~~~~g~~~~~v~~~~ 149 (232)
......+ ....+.. +... ..+...+ .......+.+.|.+.+. +++++++++|+++..++ +.. +.|.+.+
T Consensus 104 ~~~~~~~-~~~~G~~--~~~~-~~g~~~p--~~~~~~~l~~~L~~~~~~~GV~i~~~~~V~~i~~~~--~~v-~~V~~~~ 174 (447)
T 2i0z_A 104 NEDIITF-FENLGVK--LKEE-DHGRMFP--VSNKAQSVVDALLTRLKDLGVKIRTNTPVETIEYEN--GQT-KAVILQT 174 (447)
T ss_dssp HHHHHHH-HHHTTCC--EEEC-GGGEEEE--TTCCHHHHHHHHHHHHHHTTCEEECSCCEEEEEEET--TEE-EEEEETT
T ss_pred HHHHHHH-HHhcCCc--eEEe-eCCEEEC--CCCCHHHHHHHHHHHHHHCCCEEEeCcEEEEEEecC--CcE-EEEEECC
Confidence 0000000 0000000 0000 0000000 00124566777766553 89999999999998754 444 7788888
Q ss_pred CcEEEccEEEecCCCch-----------hhhhhhcCC
Q 044609 150 STIIKAKVLIGCDGVHS-----------MVAQWLGLS 175 (232)
Q Consensus 150 g~~~~a~~vV~A~G~~S-----------~~r~~~~~~ 175 (232)
|++++||.||+|+|.+| .+++.+|..
T Consensus 175 G~~i~Ad~VVlAtGg~s~~~~g~tG~g~~la~~~G~~ 211 (447)
T 2i0z_A 175 GEVLETNHVVIAVGGKSVPQTGSTGDGYAWAEKAGHT 211 (447)
T ss_dssp CCEEECSCEEECCCCSSSGGGSCSSHHHHHHHHTTCC
T ss_pred CCEEECCEEEECCCCCcCCCCCCCcHHHHHHHHCCCC
Confidence 88899999999999999 778888765
No 42
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=99.70 E-value=4.3e-16 Score=132.66 Aligned_cols=163 Identities=20% Similarity=0.180 Sum_probs=97.1
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCcEEEEecCCCCcC--cce-eeeecc------------------cHHHHHHHcCChH
Q 044609 6 EDVVIIGAGIAGLATAVALRRLGIKALVLEKSDGLRA--TGA-ALTLSP------------------NAWLALDALGVSH 64 (232)
Q Consensus 6 ~dV~IvG~G~~G~~~A~~L~~~g~~v~viE~~~~~~~--~~~-~~~~~~------------------~~~~~l~~~g~~~ 64 (232)
+||+|||||++|+++|+.|+++|++|+|||+...++. ++. +-.+.+ .+.+.++.+++..
T Consensus 273 ~DVvIIGgGiaGlsaA~~La~~G~~V~vlEk~~~~g~gaS~~~~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 352 (676)
T 3ps9_A 273 REAAIIGGGIASALLSLALLRRGWQVTLYCADEAPALGASGNRQGALYPLLSKHDEALNRFFSNAFTFARRFYDQLPVKF 352 (676)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSSSCSTTCCSCEEECCCCCSSCHHHHHHHHHHHHHHHHHHHHCCSCC
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCcccccCccCCCceecCcCCCCccHHHHHHHHHHHHHHHHHHHCCCCc
Confidence 7999999999999999999999999999999765531 111 111111 0222233322110
Q ss_pred H---------------------HHhhccCceeeEEEEcCCCce-eEEeccC-CCCCCCCceeeeehHHHHHHHhhhCC--
Q 044609 65 K---------------------LTSVYAPAKRVFVTNLGTGAT-QELSYAG-KSGRIGSGLRSVHRQSLLEALADELP-- 119 (232)
Q Consensus 65 ~---------------------~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~~~~l~~~l~~~~~-- 119 (232)
. +.....+....... ..... ...+... ..+.+.+....++...+.+.|.+.+.
T Consensus 353 ~~~~~g~l~~~~~~~~~~~~~~~~~~g~~~~~~~~l--~~~~~~~~~~l~~~~gg~~~p~~g~v~p~~l~~aL~~~a~~~ 430 (676)
T 3ps9_A 353 DHDWCGVTQLGWDEKSQHKIAQMLSMDLPAELAVAV--EANAVEQITGVATNCSGITYPQGGWLCPAELTRNVLELAQQQ 430 (676)
T ss_dssp CEECCCEEEECCSHHHHHHHHHHHTSCCCTTTCEEE--CHHHHHHHHSSCCSSCEEEETTCEEECHHHHHHHHHHHHHHT
T ss_pred CcCcCCeeeecCCHHHHHHHHHHHhcCCcHHHhhhC--CHHHHHHhhCCCccCCcEEecCCeeeCHHHHHHHHHHHHHhC
Confidence 0 00000000000000 00000 0000010 01111233456788899998887764
Q ss_pred CCeEEeCceEEEEEecCCCCCccEEEEeCCCcEEEccEEEecCCCchh-hhhhhcC
Q 044609 120 DDTIQFSSKIAAIDSQTLNGSSAAIINLGDSTIIKAKVLIGCDGVHSM-VAQWLGL 174 (232)
Q Consensus 120 ~~~i~~~~~v~~i~~~~~~g~~~~~v~~~~g~~~~a~~vV~A~G~~S~-~r~~~~~ 174 (232)
|++++++++|+++..++ .. +.|.+.+|.++.||.||+|+|.+|. +.+..+.
T Consensus 431 Gv~i~~~t~V~~l~~~~---~~-v~V~t~~G~~i~Ad~VVlAtG~~s~~l~~~~~l 482 (676)
T 3ps9_A 431 GLQIYYQYQLQNFSRKD---DC-WLLNFAGDQQATHSVVVLANGHQISRFSQTSTL 482 (676)
T ss_dssp TCEEEESCCEEEEEEET---TE-EEEEETTSCEEEESEEEECCGGGGGCSTTTTTC
T ss_pred CCEEEeCCeeeEEEEeC---Ce-EEEEECCCCEEECCEEEECCCcchhccccccCC
Confidence 89999999999999874 44 8888888888999999999999985 4444443
No 43
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=99.69 E-value=5.1e-16 Score=123.19 Aligned_cols=158 Identities=18% Similarity=0.204 Sum_probs=92.0
Q ss_pred cccEEEECCCHHHHHHHHHHHhCCCcEEEEecCCCCcCcce---e--ee---ecc--cHHH-HHHHcCChHHHHhhcc--
Q 044609 5 EEDVVIIGAGIAGLATAVALRRLGIKALVLEKSDGLRATGA---A--LT---LSP--NAWL-ALDALGVSHKLTSVYA-- 71 (232)
Q Consensus 5 ~~dV~IvG~G~~G~~~A~~L~~~g~~v~viE~~~~~~~~~~---~--~~---~~~--~~~~-~l~~~g~~~~~~~~~~-- 71 (232)
++||+|||||++|+++|+.|+++|++|+|||+.......+. + +. +.. ...+ ..+.+.++..+.....
T Consensus 2 ~~dvvIIG~Gi~Gl~~A~~La~~G~~V~vle~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~ 81 (372)
T 2uzz_A 2 KYDLIIIGSGSVGAAAGYYATRAGLNVLMTDAHMPPHQHGSHHGDTRLIRHAYGEGEKYVPLVLRAQMLWDELSRHNEDD 81 (372)
T ss_dssp CEEEEESCTTHHHHHHHHHHHHTTCCEEEECSSCSSSSSSSCCSSEEEECSSCTTCGGGHHHHHHHHHHHHHHHTTCSSS
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCCCCCCCCCCccceeeeccCCCchHHHHHHHHHHHHHHHHHhCCCc
Confidence 58999999999999999999999999999999876532111 0 11 110 0000 1111111222220000
Q ss_pred -C--ceeeEEEEcCCC--------------c-eeEEe-------ccCC------CCCCCCceeeeehHHHHHHHhhhCC-
Q 044609 72 -P--AKRVFVTNLGTG--------------A-TQELS-------YAGK------SGRIGSGLRSVHRQSLLEALADELP- 119 (232)
Q Consensus 72 -~--~~~~~~~~~~~~--------------~-~~~~~-------~~~~------~~~~~~~~~~~~~~~l~~~l~~~~~- 119 (232)
. ..+......... . ...++ ++.. .+.+.+....+++..+.+.|.+.+.
T Consensus 82 ~~~~~~g~l~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~~ 161 (372)
T 2uzz_A 82 PIFVRSGVINLGPADSTFLANVAHSAEQWQLNVEKLDAQGIMARWPEIRVPDNYIGLFETDSGFLRSELAIKTWIQLAKE 161 (372)
T ss_dssp CSEECCCEEEEEETTCHHHHHHHHHHHHTTCCEEEEEHHHHHHHCTTCCCCTTEEEEEESSCEEEEHHHHHHHHHHHHHH
T ss_pred cceeeeceEEEeCCCcHHHHHHHHHHHHcCCCcEecCHHHHHhhCCCccCCCCceEEEeCCCcEEcHHHHHHHHHHHHHH
Confidence 0 001111110000 0 00010 0000 0111233456788888888887764
Q ss_pred -CCeEEeCceEEEEEecCCCCCccEEEEeCCCcEEEccEEEecCCCchh
Q 044609 120 -DDTIQFSSKIAAIDSQTLNGSSAAIINLGDSTIIKAKVLIGCDGVHSM 167 (232)
Q Consensus 120 -~~~i~~~~~v~~i~~~~~~g~~~~~v~~~~g~~~~a~~vV~A~G~~S~ 167 (232)
+++++++++|++++.++ .. +.|.+.+|+ ++||.||+|+|.+|.
T Consensus 162 ~G~~i~~~~~V~~i~~~~---~~-~~v~~~~g~-~~a~~vV~a~G~~s~ 205 (372)
T 2uzz_A 162 AGCAQLFNCPVTAIRHDD---DG-VTIETADGE-YQAKKAIVCAGTWVK 205 (372)
T ss_dssp TTCEEECSCCEEEEEECS---SS-EEEEESSCE-EEEEEEEECCGGGGG
T ss_pred CCCEEEcCCEEEEEEEcC---CE-EEEEECCCe-EEcCEEEEcCCccHH
Confidence 78999999999998764 33 778887775 999999999999984
No 44
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=99.69 E-value=5.3e-16 Score=132.31 Aligned_cols=70 Identities=16% Similarity=0.056 Sum_probs=54.9
Q ss_pred ceeeeehHHHHHHHhhhCC--CCeEEeCceEEEEEecCCCCCccEEEEeCCCc-EEEccEEEecCCCchh-hhhhhcC
Q 044609 101 GLRSVHRQSLLEALADELP--DDTIQFSSKIAAIDSQTLNGSSAAIINLGDST-IIKAKVLIGCDGVHSM-VAQWLGL 174 (232)
Q Consensus 101 ~~~~~~~~~l~~~l~~~~~--~~~i~~~~~v~~i~~~~~~g~~~~~v~~~~g~-~~~a~~vV~A~G~~S~-~r~~~~~ 174 (232)
....++...+.+.|.+.+. |++++++++|+++..++ .. +.|.+.+|. ++.||.||+|+|.+|. +.+.++.
T Consensus 405 ~~g~v~p~~l~~aL~~~a~~~Gv~i~~~t~V~~l~~~~---~~-v~V~t~~G~~~i~Ad~VVlAtG~~s~~l~~~~~l 478 (689)
T 3pvc_A 405 AGGWLCPSDLTHALMMLAQQNGMTCHYQHELQRLKRID---SQ-WQLTFGQSQAAKHHATVILATGHRLPEWEQTHHL 478 (689)
T ss_dssp TCEEECHHHHHHHHHHHHHHTTCEEEESCCEEEEEECS---SS-EEEEEC-CCCCEEESEEEECCGGGTTCSTTTTTS
T ss_pred CCeEECHHHHHHHHHHHHHhCCCEEEeCCeEeEEEEeC---Ce-EEEEeCCCcEEEECCEEEECCCcchhccccccCC
Confidence 3456788889998887764 89999999999999874 34 788888887 8999999999999985 4444443
No 45
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=99.69 E-value=1.2e-15 Score=125.59 Aligned_cols=112 Identities=14% Similarity=0.026 Sum_probs=70.5
Q ss_pred eeeehHHHHHHHhhhCC--CCeEEeCceEEEEEecCCCCCccEEEEe---CCCc--EEEccEEEecCCCchh-hhhh-hc
Q 044609 103 RSVHRQSLLEALADELP--DDTIQFSSKIAAIDSQTLNGSSAAIINL---GDST--IIKAKVLIGCDGVHSM-VAQW-LG 173 (232)
Q Consensus 103 ~~~~~~~l~~~l~~~~~--~~~i~~~~~v~~i~~~~~~g~~~~~v~~---~~g~--~~~a~~vV~A~G~~S~-~r~~-~~ 173 (232)
..+++..+...|.+.+. |++++.+++|+++..++ .. +.|.+ .+|+ +++||.||+|+|.+|. +++. ++
T Consensus 144 g~v~~~~l~~~l~~~a~~~Gv~i~~~~~V~~l~~~~---~~-~~V~~~d~~~G~~~~i~A~~VV~AtG~~s~~l~~~~l~ 219 (501)
T 2qcu_A 144 CWVDDARLVLANAQMVVRKGGEVLTRTRATSARREN---GL-WIVEAEDIDTGKKYSWQARGLVNATGPWVKQFFDDGMH 219 (501)
T ss_dssp EEECHHHHHHHHHHHHHHTTCEEECSEEEEEEEEET---TE-EEEEEEETTTCCEEEEEESCEEECCGGGHHHHHHHHTC
T ss_pred CEEcHHHHHHHHHHHHHHcCCEEEcCcEEEEEEEeC---CE-EEEEEEECCCCCEEEEECCEEEECCChhHHHHHHHhcc
Confidence 45788899998887764 89999999999998763 33 66666 3565 7999999999999985 4553 54
Q ss_pred CC--CCcccceeEEEEeeecCCCCCCccceeEEE--ecCeEEEEEEcCCCeEEE
Q 044609 174 LS--ESINSGRSSVRGLAVFPHGHGLNQDIRQFV--GVGFRAGFIPLNDRDVYW 223 (232)
Q Consensus 174 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~p~~~~~~~~ 223 (232)
.. .+..+....+. .+. ...+ .....++ .++..++++|..++.+.+
T Consensus 220 ~~~~~~i~p~rG~~~-~~~--~~~~--~~~~~~~~~~dg~~~~~~P~~~g~~~i 268 (501)
T 2qcu_A 220 LPSPYGIRLIKGSHI-VVP--RVHT--QKQAYILQNEDKRIVFVIPWMDEFSII 268 (501)
T ss_dssp CCCSSCBCCEEEEEE-EEE--CSSS--CSCEEEEECTTSCEEEEEEETTTEEEE
T ss_pred CCcccccccceeEEE-EEC--CCCC--CceEEEeecCCCCEEEEEEcCCCcEEE
Confidence 32 22222221111 122 1111 1122233 355667888998776443
No 46
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=99.68 E-value=6.7e-16 Score=127.42 Aligned_cols=140 Identities=16% Similarity=0.330 Sum_probs=89.1
Q ss_pred cccEEEECCCHHHHHHHHHHHhCCCcEEEEecCCCCcCcce------------------------eee----e-------
Q 044609 5 EEDVVIIGAGIAGLATAVALRRLGIKALVLEKSDGLRATGA------------------------ALT----L------- 49 (232)
Q Consensus 5 ~~dV~IvG~G~~G~~~A~~L~~~g~~v~viE~~~~~~~~~~------------------------~~~----~------- 49 (232)
++||+||||||+|+++|+.|++.|++|+|||+.+.+..... +.. +
T Consensus 107 ~~DVVIVGgGpaGL~aA~~La~~G~kV~VlEr~~~~~~R~~~~~g~w~~~~~~~~~~i~~g~gGag~~sdgkl~~~i~~~ 186 (549)
T 3nlc_A 107 TERPIVIGFGPCGLFAGLVLAQMGFNPIIVERGKEVRERTKDTFGFWRKRTLNPESNVQFGEGGAGTFSDGKLYSQVKDP 186 (549)
T ss_dssp CCCCEEECCSHHHHHHHHHHHHTTCCCEEECSSCCHHHHHHHHHHHHHHCCCCTTSSSSSSTTGGGTTSCCCCCCCSCCT
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCeEEEEEccCcccccccchhcccccccccccccceeccCCcccccCCceEEEeccc
Confidence 47999999999999999999999999999999875421100 000 0
Q ss_pred ---cccHHHHHHHcCChHHHHhhccCceeeEEEEcCCCceeEEeccCCCCCCCCceeeeehHHHHHHHhhhCC--CCeEE
Q 044609 50 ---SPNAWLALDALGVSHKLTSVYAPAKRVFVTNLGTGATQELSYAGKSGRIGSGLRSVHRQSLLEALADELP--DDTIQ 124 (232)
Q Consensus 50 ---~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~--~~~i~ 124 (232)
.....+.+...|.... +.+. . .+.........+.+.|.+.+. +++++
T Consensus 187 ~~~~~~v~~~~~~~G~~~~-----------------------i~~~---~--~p~~G~~~~~~l~~~L~~~l~~~Gv~I~ 238 (549)
T 3nlc_A 187 NFYGRKVITEFVEAGAPEE-----------------------ILYV---S--KPHIGTFKLVTMIEKMRATIIELGGEIR 238 (549)
T ss_dssp TCHHHHHHHHHHHTTCCGG-----------------------GGTB---S--SCCCCHHHHHHHHHHHHHHHHHTTCEEE
T ss_pred cccHHHHHHHHHHcCCCce-----------------------Eeec---c--ccccccchHHHHHHHHHHHHHhcCCEEE
Confidence 0000000111110000 0000 0 111112345666777766553 89999
Q ss_pred eCceEEEEEecCCCCCccEEEEeCCCcEEEccEEEecCCCchh----hhhhhcCC
Q 044609 125 FSSKIAAIDSQTLNGSSAAIINLGDSTIIKAKVLIGCDGVHSM----VAQWLGLS 175 (232)
Q Consensus 125 ~~~~v~~i~~~~~~g~~~~~v~~~~g~~~~a~~vV~A~G~~S~----~r~~~~~~ 175 (232)
++++|+++..++ +.. +.|.+.+|+++.||.||+|+|++|. +.+..++.
T Consensus 239 ~~t~V~~I~~~~--~~v-~gV~l~~G~~i~Ad~VVlA~G~~s~~~~~~l~~~Gi~ 290 (549)
T 3nlc_A 239 FSTRVDDLHMED--GQI-TGVTLSNGEEIKSRHVVLAVGHSARDTFEMLHERGVY 290 (549)
T ss_dssp SSCCEEEEEESS--SBE-EEEEETTSCEEECSCEEECCCTTCHHHHHHHHHTTCC
T ss_pred eCCEEEEEEEeC--CEE-EEEEECCCCEEECCEEEECCCCChhhHHHHHHHcCCC
Confidence 999999998865 444 6688899999999999999999984 33444554
No 47
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=99.67 E-value=6.9e-16 Score=118.07 Aligned_cols=133 Identities=20% Similarity=0.285 Sum_probs=85.0
Q ss_pred ccccEEEECCCHHHHHHHHHHHhC-CCcEEEEecCCCCcCcce-------eeeecccHHHHHHHcCChHHHHhhccCcee
Q 044609 4 VEEDVVIIGAGIAGLATAVALRRL-GIKALVLEKSDGLRATGA-------ALTLSPNAWLALDALGVSHKLTSVYAPAKR 75 (232)
Q Consensus 4 ~~~dV~IvG~G~~G~~~A~~L~~~-g~~v~viE~~~~~~~~~~-------~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~ 75 (232)
.++||+|||||++|+++|+.|+++ |++|+||||.+.++.... .+.......+.++++|+. ...
T Consensus 38 ~~~dVvIIGgG~aGl~aA~~la~~~G~~V~viEk~~~~gg~~~~~~~~~~~~~~~~~~~~~l~~~G~~---------~~~ 108 (284)
T 1rp0_A 38 AETDVVVVGAGSAGLSAAYEISKNPNVQVAIIEQSVSPGGGAWLGGQLFSAMIVRKPAHLFLDEIGVA---------YDE 108 (284)
T ss_dssp TEEEEEEECCSHHHHHHHHHHHTSTTSCEEEEESSSSCCTTTTCCSTTCCCEEEETTTHHHHHHHTCC---------CEE
T ss_pred cccCEEEECccHHHHHHHHHHHHcCCCeEEEEECCCCCCCceecCCcchHHHHcCcHHHHHHHHcCCC---------ccc
Confidence 458999999999999999999997 999999999876632110 111222233444443321 100
Q ss_pred eEEEEcCCCceeEEeccCCCCCCCCceeeeehHHHHHHHhhhC---CCCeEEeCceEEEEEecCCCCCccEEEEeC----
Q 044609 76 VFVTNLGTGATQELSYAGKSGRIGSGLRSVHRQSLLEALADEL---PDDTIQFSSKIAAIDSQTLNGSSAAIINLG---- 148 (232)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~---~~~~i~~~~~v~~i~~~~~~g~~~~~v~~~---- 148 (232)
.+ . .....++..+.+.|.+.+ .+++++++++|+++..++ +.. ..|.+.
T Consensus 109 -------~~-----------~----~~~~~~~~~~~~~l~~~~~~~~gv~i~~~~~V~~i~~~~--~~v-~gv~~~~~~~ 163 (284)
T 1rp0_A 109 -------QD-----------T----YVVVKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKG--NRV-GGVVTNWALV 163 (284)
T ss_dssp -------CS-----------S----EEEESCHHHHHHHHHHHHHTSTTEEEEETEEEEEEEEET--TEE-EEEEEEEHHH
T ss_pred -------CC-----------C----EEEecCHHHHHHHHHHHHHhcCCCEEEcCcEEEEEEecC--CeE-EEEEEecccc
Confidence 00 0 001124556666665543 378999999999998764 332 334331
Q ss_pred -----CC-----cEEEccEEEecCCCchhhhh
Q 044609 149 -----DS-----TIIKAKVLIGCDGVHSMVAQ 170 (232)
Q Consensus 149 -----~g-----~~~~a~~vV~A~G~~S~~r~ 170 (232)
++ .++.||.||+|+|..|.++.
T Consensus 164 ~~~~~~g~~g~~~~i~ad~VV~AtG~~s~~~~ 195 (284)
T 1rp0_A 164 AQNHHTQSCMDPNVMEAKIVVSSCGHDGPFGA 195 (284)
T ss_dssp HTCTTTSSCCCCEEEEEEEEEECCCSSSTTTT
T ss_pred ccccCccccCceEEEECCEEEECCCCchHHHH
Confidence 32 47999999999999887654
No 48
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=99.66 E-value=1.5e-15 Score=122.81 Aligned_cols=146 Identities=16% Similarity=0.162 Sum_probs=86.8
Q ss_pred ccccEEEECCCHHHHHHHHHHHhCCCcEEEEecCCCCcCc-c---eeeeecccHHHHHHHcCChHHHHhhccCceeeEEE
Q 044609 4 VEEDVVIIGAGIAGLATAVALRRLGIKALVLEKSDGLRAT-G---AALTLSPNAWLALDALGVSHKLTSVYAPAKRVFVT 79 (232)
Q Consensus 4 ~~~dV~IvG~G~~G~~~A~~L~~~g~~v~viE~~~~~~~~-~---~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~ 79 (232)
|.+||+||||||+|+++|+.|+++|++|+|||+.+..... + ........+...++.+|+.. ......+.......
T Consensus 21 m~~~ViIVGaGpaGl~~A~~La~~G~~V~viE~~~~~~~~~g~~~~~~~~~~~~~~~~~~lg~~~-~~~~~~~~~~~~~~ 99 (430)
T 3ihm_A 21 MKKRIGIVGAGTAGLHLGLFLRQHDVDVTVYTDRKPDEYSGLRLLNTVAHNAVTVQREVALDVNE-WPSEEFGYFGHYYY 99 (430)
T ss_dssp --CEEEEECCHHHHHHHHHHHHHTTCEEEEEESCCGGGSTTSCCCCCCCBCHHHHHHHHHTTCCC-SCHHHHCEEEEEEE
T ss_pred CCCCEEEECCcHHHHHHHHHHHHCCCeEEEEcCCChHhhcccccccchhccchhhhhhhhcChhh-hhhhcccccceeEE
Confidence 5589999999999999999999999999999998743221 1 12234455667777776522 11223344455554
Q ss_pred EcCCCceeEEeccCCCCCCCCceeeeehHHHHHHHhhhCC--CCeEEeCceEEEEEecCCCCCccEEEEeCCCcEEEccE
Q 044609 80 NLGTGATQELSYAGKSGRIGSGLRSVHRQSLLEALADELP--DDTIQFSSKIAAIDSQTLNGSSAAIINLGDSTIIKAKV 157 (232)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~--~~~i~~~~~v~~i~~~~~~g~~~~~v~~~~g~~~~a~~ 157 (232)
..... . ..+.... ......+++..+.+.|.+.+. ++++++.. + .... ... . ...+|+
T Consensus 100 ~~~~~-~--~~~~~~~---~~~~~~v~~~~l~~~L~~~~~~~Gv~v~~~~-v---~~~~--l~~-~--------~~~ad~ 158 (430)
T 3ihm_A 100 VGGPQ-P--MRFYGDL---KAPSRAVDYRLYQPMLMRALEARGGKFCYDA-V---SAED--LEG-L--------SEQYDL 158 (430)
T ss_dssp ECSSS-C--EEEEEEE---EEEEBEECHHHHHHHHHHHHHHTTCEEEECC-C---CGGG--HHH-H--------HTTSSE
T ss_pred ECCCC-c--cccchhc---CCcceeecHHHHHHHHHHHHHHcCCEEEEEe-c---chhh--hhh-h--------cccCCE
Confidence 43222 1 1111110 112356788888888887663 66666521 1 0010 000 0 125899
Q ss_pred EEecCCCchhhhhh
Q 044609 158 LIGCDGVHSMVAQW 171 (232)
Q Consensus 158 vV~A~G~~S~~r~~ 171 (232)
||+|||.+|.++..
T Consensus 159 VV~AdG~~S~~~~~ 172 (430)
T 3ihm_A 159 LVVCTGKYALGKVF 172 (430)
T ss_dssp EEECCCCTTGGGGS
T ss_pred EEECCCCcchHHhc
Confidence 99999999987643
No 49
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=99.65 E-value=1.3e-15 Score=121.81 Aligned_cols=141 Identities=21% Similarity=0.260 Sum_probs=84.6
Q ss_pred ccccEEEECCCHHHHHHHHHHHhCCCcEEEEecCCCCcCc----ceee---ee---ccc---------HHHHHHHcCChH
Q 044609 4 VEEDVVIIGAGIAGLATAVALRRLGIKALVLEKSDGLRAT----GAAL---TL---SPN---------AWLALDALGVSH 64 (232)
Q Consensus 4 ~~~dV~IvG~G~~G~~~A~~L~~~g~~v~viE~~~~~~~~----~~~~---~~---~~~---------~~~~l~~~g~~~ 64 (232)
+++||+|||||++|+++|+.|+++|.+|+|+||.+.++.. +.+. .. .+. ....+..+...+
T Consensus 3 ~~~dViIIGgG~aGl~aA~~la~~G~~V~vlEk~~~~g~~~~~sggg~cn~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 82 (401)
T 2gqf_A 3 QYSENIIIGAGAAGLFCAAQLAKLGKSVTVFDNGKKIGRKILMSGGGFCNFTNLEVTPAHYLSQNPHFVKSALARYTNWD 82 (401)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHGGGGTCCCEESSCCGGGEECSCTTSTHHHHHHSCHHH
T ss_pred CCCCEEEECCcHHHHHHHHHHHhCCCCEEEEeCCCCCchhcEEcCCCeEEccCCccCHHHhccCCHHHHHHHHHhCCHHH
Confidence 5699999999999999999999999999999998865321 1010 00 000 001111111100
Q ss_pred H---HHhhccCceeeEEEEcCCCceeEEeccCCCCCCCCceeeeehHHHHHHHhhhCC--CCeEEeCceEEEEEecCCC-
Q 044609 65 K---LTSVYAPAKRVFVTNLGTGATQELSYAGKSGRIGSGLRSVHRQSLLEALADELP--DDTIQFSSKIAAIDSQTLN- 138 (232)
Q Consensus 65 ~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~--~~~i~~~~~v~~i~~~~~~- 138 (232)
. +...+.+ +.....+ ..++ . . .+..+.+.|.+.+. +++++++++|+++..+++.
T Consensus 83 ~~~~~~~~Gi~-----~~~~~~g--~~~p---------~---~-~~~~l~~~L~~~~~~~Gv~i~~~~~v~~i~~~~~g~ 142 (401)
T 2gqf_A 83 FISLVAEQGIT-----YHEKELG--QLFC---------D---E-GAEQIVEMLKSECDKYGAKILLRSEVSQVERIQNDE 142 (401)
T ss_dssp HHHHHHHTTCC-----EEECSTT--EEEE---------T---T-CTHHHHHHHHHHHHHHTCEEECSCCEEEEEECCSCS
T ss_pred HHHHHHhCCCc-----eEECcCC--EEcc---------C---C-CHHHHHHHHHHHHHHCCCEEEeCCEEEEEEcccCcC
Confidence 0 0111111 1100000 0000 0 0 45667777766654 8999999999999865100
Q ss_pred CCccEEEEeCCCcEEEccEEEecCCCch
Q 044609 139 GSSAAIINLGDSTIIKAKVLIGCDGVHS 166 (232)
Q Consensus 139 g~~~~~v~~~~g~~~~a~~vV~A~G~~S 166 (232)
+.. +.|.+.++ +++||.||+|+|.+|
T Consensus 143 ~~~-~~v~~~~g-~i~ad~VVlAtG~~s 168 (401)
T 2gqf_A 143 KVR-FVLQVNST-QWQCKNLIVATGGLS 168 (401)
T ss_dssp SCC-EEEEETTE-EEEESEEEECCCCSS
T ss_pred CCe-EEEEECCC-EEECCEEEECCCCcc
Confidence 023 77777777 799999999999998
No 50
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=99.64 E-value=8.6e-16 Score=120.20 Aligned_cols=123 Identities=18% Similarity=0.297 Sum_probs=85.3
Q ss_pred CCcccccEEEECCCHHHHHHHHHHHhCCCcEEEEecCCCCcCcceeeeecccHHHHHHHcCChHHHHhhccCceeeEEEE
Q 044609 1 MEMVEEDVVIIGAGIAGLATAVALRRLGIKALVLEKSDGLRATGAALTLSPNAWLALDALGVSHKLTSVYAPAKRVFVTN 80 (232)
Q Consensus 1 m~~~~~dV~IvG~G~~G~~~A~~L~~~g~~v~viE~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~ 80 (232)
|.++++||+|||||++|+++|..|++.|++|+|||+.+.++.. .... .+.. ..
T Consensus 1 m~~~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gg~------------~~~~-----------~~~~--~~-- 53 (335)
T 2zbw_A 1 MAADHTDVLIVGAGPTGLFAGFYVGMRGLSFRFVDPLPEPGGQ------------LTAL-----------YPEK--YI-- 53 (335)
T ss_dssp --CCEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSCHH------------HHHT-----------CTTS--EE--
T ss_pred CCCCcCcEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCCCCe------------eecc-----------CCCc--ee--
Confidence 5566799999999999999999999999999999998765211 0000 0000 00
Q ss_pred cCCCceeEEeccCCCCCCCCceeeeehHHHHHHHhhhCC--CCeEEeCceEEEEEecCCCCCccEEEEeCCCcEEEccEE
Q 044609 81 LGTGATQELSYAGKSGRIGSGLRSVHRQSLLEALADELP--DDTIQFSSKIAAIDSQTLNGSSAAIINLGDSTIIKAKVL 158 (232)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~--~~~i~~~~~v~~i~~~~~~g~~~~~v~~~~g~~~~a~~v 158 (232)
.... + ...+.+..+.+.+.+.+. +++++++++|+++..++ .. +.|.+.+|.++.+|.|
T Consensus 54 --------~~~~---~-----~~~~~~~~~~~~l~~~~~~~~~~~~~~~~v~~i~~~~---~~-~~v~~~~g~~~~~~~l 113 (335)
T 2zbw_A 54 --------YDVA---G-----FPKVYAKDLVKGLVEQVAPFNPVYSLGERAETLEREG---DL-FKVTTSQGNAYTAKAV 113 (335)
T ss_dssp --------CCST---T-----CSSEEHHHHHHHHHHHHGGGCCEEEESCCEEEEEEET---TE-EEEEETTSCEEEEEEE
T ss_pred --------eccC---C-----CCCCCHHHHHHHHHHHHHHcCCEEEeCCEEEEEEECC---CE-EEEEECCCCEEEeCEE
Confidence 0000 0 012456667776665543 67899999999998764 34 7888888888999999
Q ss_pred EecCCCchhhhh
Q 044609 159 IGCDGVHSMVAQ 170 (232)
Q Consensus 159 V~A~G~~S~~r~ 170 (232)
|+|+|..|...+
T Consensus 114 v~AtG~~~~~p~ 125 (335)
T 2zbw_A 114 IIAAGVGAFEPR 125 (335)
T ss_dssp EECCTTSEEEEC
T ss_pred EECCCCCCCCCC
Confidence 999999764433
No 51
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=99.64 E-value=1e-15 Score=124.51 Aligned_cols=75 Identities=13% Similarity=0.174 Sum_probs=57.2
Q ss_pred eeeeehHHHHHHHhhhCC--CCeEEeCceEEEEEe---------------cCCCCCccEEEEeCCCcEE--EccEEEecC
Q 044609 102 LRSVHRQSLLEALADELP--DDTIQFSSKIAAIDS---------------QTLNGSSAAIINLGDSTII--KAKVLIGCD 162 (232)
Q Consensus 102 ~~~~~~~~l~~~l~~~~~--~~~i~~~~~v~~i~~---------------~~~~g~~~~~v~~~~g~~~--~a~~vV~A~ 162 (232)
...++...+.+.|.+.+. +++++++++|+++.. ++ +.. +.|.+.+| ++ .||.||+|+
T Consensus 175 ~~~~~~~~l~~~L~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~~~~~~~~~~--~~v-~~V~t~~g-~i~~~Ad~VV~At 250 (448)
T 3axb_A 175 AGFLDAEKVVDYYYRRASGAGVEFIFGRRVVGVELKPRVELGIEGEPLPWQE--ARA-SAAVLSDG-TRVEVGEKLVVAA 250 (448)
T ss_dssp EEECCHHHHHHHHHHHHHHTTCEEEESCCEEEEEEEESSCCCCTTSSCTTSC--EEE-EEEEETTS-CEEEEEEEEEECC
T ss_pred CeEEcHHHHHHHHHHHHHhCCCEEEcCCeEEEEEecccccccccccccccCC--Cce-EEEEeCCC-EEeecCCEEEECC
Confidence 455677888888887764 899999999999987 32 232 56778888 58 999999999
Q ss_pred CCchh-hhhhhcCCCCccc
Q 044609 163 GVHSM-VAQWLGLSESINS 180 (232)
Q Consensus 163 G~~S~-~r~~~~~~~~~~~ 180 (232)
|.+|. +.+.++...+..+
T Consensus 251 G~~s~~l~~~~g~~~~~~p 269 (448)
T 3axb_A 251 GVWSNRLLNPLGIDTFSRP 269 (448)
T ss_dssp GGGHHHHHGGGTCCCSEEE
T ss_pred CcCHHHHHHHcCCCCcccc
Confidence 99986 6777776555443
No 52
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=99.63 E-value=1.6e-15 Score=112.71 Aligned_cols=130 Identities=15% Similarity=0.118 Sum_probs=84.4
Q ss_pred cccccEEEECCCHHHHHHHHHHHhCCCcEEEEecCCCCcCcceeeeecccHHHHHHHcCChHHHHhhccCceeeEEEEcC
Q 044609 3 MVEEDVVIIGAGIAGLATAVALRRLGIKALVLEKSDGLRATGAALTLSPNAWLALDALGVSHKLTSVYAPAKRVFVTNLG 82 (232)
Q Consensus 3 ~~~~dV~IvG~G~~G~~~A~~L~~~g~~v~viE~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~ 82 (232)
|+++||+|||||++|+.+|..|++.|.+|+|||+..... + ....+.. ..+. ...+..
T Consensus 1 M~~~dVvVVGgG~aGl~aA~~la~~g~~v~lie~~~~~~--G--~~~~~~~----~~~~-~~~~~~-------------- 57 (232)
T 2cul_A 1 MAAYQVLIVGAGFSGAETAFWLAQKGVRVGLLTQSLDAV--M--MPFLPPK----PPFP-PGSLLE-------------- 57 (232)
T ss_dssp -CCCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGT--T--CCSSCCC----SCCC-TTCHHH--------------
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEecCCCcC--C--cccCccc----cccc-hhhHHh--------------
Confidence 356899999999999999999999999999999974211 1 1111100 0000 000000
Q ss_pred CCceeEEeccCCCCCCCCceeeeehHHHHHHHhhhC---CCCeEEeCceEEEEEecCCCCCccEEEEeCCCcEEEccEEE
Q 044609 83 TGATQELSYAGKSGRIGSGLRSVHRQSLLEALADEL---PDDTIQFSSKIAAIDSQTLNGSSAAIINLGDSTIIKAKVLI 159 (232)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~---~~~~i~~~~~v~~i~~~~~~g~~~~~v~~~~g~~~~a~~vV 159 (232)
.++ ... .+ ++..+.+.|.+.+ ++++++ +++|+++..++ +.. +.|.+.+|.++.||+||
T Consensus 58 -----~~~--d~~---g~-----~~~~~~~~l~~~~~~~~gv~i~-~~~v~~i~~~~--~~v-~~v~~~~g~~i~a~~VV 118 (232)
T 2cul_A 58 -----RAY--DPK---DE-----RVWAFHARAKYLLEGLRPLHLF-QATATGLLLEG--NRV-VGVRTWEGPPARGEKVV 118 (232)
T ss_dssp -----HHC--CTT---CC-----CHHHHHHHHHHHHHTCTTEEEE-ECCEEEEEEET--TEE-EEEEETTSCCEECSEEE
T ss_pred -----hhc--cCC---CC-----CHHHHHHHHHHHHHcCCCcEEE-EeEEEEEEEeC--CEE-EEEEECCCCEEECCEEE
Confidence 000 001 11 5667777776654 367777 57999998764 343 56788888889999999
Q ss_pred ecCCCchhhhhhhcC
Q 044609 160 GCDGVHSMVAQWLGL 174 (232)
Q Consensus 160 ~A~G~~S~~r~~~~~ 174 (232)
+|+|.+|..+..+|.
T Consensus 119 ~A~G~~s~~~~~~G~ 133 (232)
T 2cul_A 119 LAVGSFLGARLFLGG 133 (232)
T ss_dssp ECCTTCSSCEEEETT
T ss_pred ECCCCChhhceecCC
Confidence 999999876655543
No 53
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=99.63 E-value=9.5e-16 Score=120.73 Aligned_cols=129 Identities=20% Similarity=0.208 Sum_probs=85.1
Q ss_pred ccccEEEECCCHHHHHHHHHHHhCCCcEEEEecCCCCcCcceeeeecccHHHHHHHcCChHHHHhhccCceeeEEEEcCC
Q 044609 4 VEEDVVIIGAGIAGLATAVALRRLGIKALVLEKSDGLRATGAALTLSPNAWLALDALGVSHKLTSVYAPAKRVFVTNLGT 83 (232)
Q Consensus 4 ~~~dV~IvG~G~~G~~~A~~L~~~g~~v~viE~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~ 83 (232)
+++||+|||||++|+++|..|+++|++|+|||+.+.++.... + . ++.+ ... ..
T Consensus 2 ~~~~vvIIG~G~aGl~~A~~l~~~g~~v~vie~~~~~gg~~~------~------~---~~~~-~~~-----------~~ 54 (357)
T 4a9w_A 2 DSVDVVVIGGGQSGLSAGYFLRRSGLSYVILDAEASPGGAWQ------H------A---WHSL-HLF-----------SP 54 (357)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHSSCCEEEECCSSSSSGGGG------G------S---CTTC-BCS-----------SC
T ss_pred CcCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCccc------C------C---CCCc-Eec-----------Cc
Confidence 458999999999999999999999999999999886642211 0 0 0000 000 00
Q ss_pred CceeEEeccCCCCCCCCceeeeehHHHHHHHhhhCC--CCeEEeCceEEEEEecCCCCCccEE-EEeCCCcEEEccEEEe
Q 044609 84 GATQELSYAGKSGRIGSGLRSVHRQSLLEALADELP--DDTIQFSSKIAAIDSQTLNGSSAAI-INLGDSTIIKAKVLIG 160 (232)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~--~~~i~~~~~v~~i~~~~~~g~~~~~-v~~~~g~~~~a~~vV~ 160 (232)
.. ...+...... ........+..+.+.+.+.+. +++++++++|+++..++ .. +. |.+.++ ++.+|.||+
T Consensus 55 ~~--~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~v~~i~~~~---~~-~~~v~~~~g-~~~~d~vV~ 126 (357)
T 4a9w_A 55 AG--WSSIPGWPMP-ASQGPYPARAEVLAYLAQYEQKYALPVLRPIRVQRVSHFG---ER-LRVVARDGR-QWLARAVIS 126 (357)
T ss_dssp GG--GSCCSSSCCC-CCSSSSCBHHHHHHHHHHHHHHTTCCEECSCCEEEEEEET---TE-EEEEETTSC-EEEEEEEEE
T ss_pred hh--hhhCCCCCCC-CCccCCCCHHHHHHHHHHHHHHcCCEEEcCCEEEEEEECC---Cc-EEEEEeCCC-EEEeCEEEE
Confidence 00 0000000000 111223456777777776553 78999999999998864 44 77 888887 799999999
Q ss_pred cCCCchh
Q 044609 161 CDGVHSM 167 (232)
Q Consensus 161 A~G~~S~ 167 (232)
|+|.+|.
T Consensus 127 AtG~~~~ 133 (357)
T 4a9w_A 127 ATGTWGE 133 (357)
T ss_dssp CCCSGGG
T ss_pred CCCCCCC
Confidence 9999874
No 54
>1pj5_A N,N-dimethylglycine oxidase; channelling, FAD binding, folate binding, amine oxidase, oxidoreductase; HET: FAD; 1.61A {Arthrobacter globiformis} SCOP: b.44.2.1 c.3.1.2 d.16.1.5 d.250.1.1 PDB: 1pj6_A* 1pj7_A* 3gsi_A*
Probab=99.63 E-value=2.3e-15 Score=130.88 Aligned_cols=78 Identities=14% Similarity=0.249 Sum_probs=59.5
Q ss_pred eeeeehHHHHHHHhhhCC--CCeEEeCceEEEEEecCCCCCccEEEEeCCCcEEEccEEEecCCCchh-hhhhhcCCCCc
Q 044609 102 LRSVHRQSLLEALADELP--DDTIQFSSKIAAIDSQTLNGSSAAIINLGDSTIIKAKVLIGCDGVHSM-VAQWLGLSESI 178 (232)
Q Consensus 102 ~~~~~~~~l~~~l~~~~~--~~~i~~~~~v~~i~~~~~~g~~~~~v~~~~g~~~~a~~vV~A~G~~S~-~r~~~~~~~~~ 178 (232)
...+++..+.+.|.+.+. |++++.+++|+++..++ +.. +.|.+.+| +++||.||+|+|.+|. +.+.++...+.
T Consensus 145 ~g~v~p~~l~~~L~~~a~~~Gv~i~~~t~V~~i~~~~--~~v-~~V~t~~G-~i~Ad~VV~AaG~~s~~l~~~~g~~~pl 220 (830)
T 1pj5_A 145 DGLASAARAVQLLIKRTESAGVTYRGSTTVTGIEQSG--GRV-TGVQTADG-VIPADIVVSCAGFWGAKIGAMIGMAVPL 220 (830)
T ss_dssp CEEECHHHHHHHHHHHHHHTTCEEECSCCEEEEEEET--TEE-EEEEETTE-EEECSEEEECCGGGHHHHHHTTTCCCCC
T ss_pred CceEcHHHHHHHHHHHHHHcCCEEECCceEEEEEEeC--CEE-EEEEECCc-EEECCEEEECCccchHHHHHHhCCCccc
Confidence 456788899998888764 79999999999998764 343 56778777 6999999999999985 45566766655
Q ss_pred cccee
Q 044609 179 NSGRS 183 (232)
Q Consensus 179 ~~~~~ 183 (232)
.+...
T Consensus 221 ~p~~g 225 (830)
T 1pj5_A 221 LPLAH 225 (830)
T ss_dssp EEEEE
T ss_pred eecee
Confidence 54333
No 55
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=99.62 E-value=6e-15 Score=123.18 Aligned_cols=157 Identities=17% Similarity=0.193 Sum_probs=91.0
Q ss_pred ccccEEEECCCHHHHHHHHHHHhCCCcEEEEecCCCCcCcc--eeeeecccHHHHHHHcCChHH----------------
Q 044609 4 VEEDVVIIGAGIAGLATAVALRRLGIKALVLEKSDGLRATG--AALTLSPNAWLALDALGVSHK---------------- 65 (232)
Q Consensus 4 ~~~dV~IvG~G~~G~~~A~~L~~~g~~v~viE~~~~~~~~~--~~~~~~~~~~~~l~~~g~~~~---------------- 65 (232)
.++||+|||||++|+++|+.|+++|.+|+||||.+.++... .+-.++.......+.+|+.+.
T Consensus 120 ~~~DVvVVG~G~aGl~aA~~la~~G~~V~vlEk~~~~gg~s~~s~gg~~~~~~~~~~~~g~~ds~~~~~~~~~~~~~~~~ 199 (566)
T 1qo8_A 120 ETTQVLVVGAGSAGFNASLAAKKAGANVILVDKAPFSGGNSMISAGGMNAVGTKQQTAHGVEDKVEWFIEDAMKGGRQQN 199 (566)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSSCTTGGGCCSCEECSSCHHHHHTTCCCCHHHHHHHHHHHTTTCS
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCCCCcccccCceeEccCCHHHHHhCCCCCHHHHHHHHHHhcCCCC
Confidence 45899999999999999999999999999999998764311 111111111122223332211
Q ss_pred ------------------HHhhccCceeeEEEEcCCCceeEEeccCCCCCCCCceeeeehHHHHHHHhhhCC--CCeEEe
Q 044609 66 ------------------LTSVYAPAKRVFVTNLGTGATQELSYAGKSGRIGSGLRSVHRQSLLEALADELP--DDTIQF 125 (232)
Q Consensus 66 ------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~--~~~i~~ 125 (232)
+...+.++... ....+.. ++... .+....+....+.+.|.+.+. ++++++
T Consensus 200 ~~~~~~~~~~~~~~~i~~l~~~Gv~~~~~---~~~~g~~----~~r~~---~~~~~~~~~~~l~~~L~~~~~~~gv~i~~ 269 (566)
T 1qo8_A 200 DIKLVTILAEQSADGVQWLESLGANLDDL---KRSGGAR----VDRTH---RPHGGKSSGPEIIDTLRKAAKEQGIDTRL 269 (566)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTTCCCCEE---ECCTTCS----SCCEE---ECSSSSCHHHHHHHHHHHHHHHTTCCEEC
T ss_pred CHHHHHHHHhccHHHHHHHHhcCCccccc---cccCCCC----CCcee---ecCCCCCCHHHHHHHHHHHHHhcCCEEEe
Confidence 11111111100 0000000 00000 000011345677777776653 899999
Q ss_pred CceEEEEEecCCCCCccEEEEe--CCCc--EEEccEEEecCCCchhhhhhh
Q 044609 126 SSKIAAIDSQTLNGSSAAIINL--GDST--IIKAKVLIGCDGVHSMVAQWL 172 (232)
Q Consensus 126 ~~~v~~i~~~~~~g~~~~~v~~--~~g~--~~~a~~vV~A~G~~S~~r~~~ 172 (232)
+++|+++..+++ +.. ..|.. .+|+ ++.||.||+|+|.+|..++++
T Consensus 270 ~~~v~~l~~~~~-g~v-~Gv~~~~~~g~~~~i~A~~VVlAtGg~s~~~~~~ 318 (566)
T 1qo8_A 270 NSRVVKLVVNDD-HSV-VGAVVHGKHTGYYMIGAKSVVLATGGYGMNKEMI 318 (566)
T ss_dssp SEEEEEEEECTT-SBE-EEEEEEETTTEEEEEEEEEEEECCCCCTTCHHHH
T ss_pred CCEEEEEEECCC-CcE-EEEEEEeCCCcEEEEEcCEEEEecCCcccCHHHH
Confidence 999999987641 232 33443 4675 689999999999999765554
No 56
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=99.62 E-value=2e-15 Score=125.76 Aligned_cols=152 Identities=20% Similarity=0.196 Sum_probs=92.4
Q ss_pred ccccEEEECCCHHHHHHHHHHHhCCCcEEEEecCC-CCcCcceeeeec----ccHHHHHHHcCC-hHHHHhhccCceeeE
Q 044609 4 VEEDVVIIGAGIAGLATAVALRRLGIKALVLEKSD-GLRATGAALTLS----PNAWLALDALGV-SHKLTSVYAPAKRVF 77 (232)
Q Consensus 4 ~~~dV~IvG~G~~G~~~A~~L~~~g~~v~viE~~~-~~~~~~~~~~~~----~~~~~~l~~~g~-~~~~~~~~~~~~~~~ 77 (232)
.++||+|||||++|+++|+.|++.|.+|+|||+.. ..+..++..... ....+.++.++- ...... ...+.
T Consensus 27 ~~yDVIVIGgG~AGl~AAlaLAr~G~kVlLIEk~~~~iG~~~Cnps~ggia~~~lv~ei~algg~~~~~~d----~~gi~ 102 (651)
T 3ces_A 27 DPFDVIIIGGGHAGTEAAMAAARMGQQTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEVDALGGLMAKAID----QAGIQ 102 (651)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCSSSSEEESTTHHHHHHHHHHTTCSHHHHHH----HHEEE
T ss_pred CcCCEEEECChHHHHHHHHHHHhCCCCEEEEeecccccccccccccccchhhHHHHHHHHHhccHHHHHhh----hcccc
Confidence 35899999999999999999999999999999974 232222211111 112233333332 111111 01122
Q ss_pred EEEcCCCceeEEeccCCCCCCCCceeeeehHHHHHHHhhhC---CCCeEEeCceEEEEEecCCCCCccEEEEeCCCcEEE
Q 044609 78 VTNLGTGATQELSYAGKSGRIGSGLRSVHRQSLLEALADEL---PDDTIQFSSKIAAIDSQTLNGSSAAIINLGDSTIIK 154 (232)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~---~~~~i~~~~~v~~i~~~~~~g~~~~~v~~~~g~~~~ 154 (232)
+...... ...........+++..+.+.|.+.+ +++++ ++++|+++..++ +.. +.|.+.+|.++.
T Consensus 103 f~~l~~~---------kgpav~~~r~~~Dr~~~~~~L~e~Le~~~GV~I-~~~~V~~L~~e~--g~V-~GV~t~dG~~I~ 169 (651)
T 3ces_A 103 FRILNAS---------KGPAVRATRAQADRVLYRQAVRTALENQPNLMI-FQQAVEDLIVEN--DRV-VGAVTQMGLKFR 169 (651)
T ss_dssp EEEESTT---------SCGGGCEEEEEECHHHHHHHHHHHHHTCTTEEE-EECCEEEEEESS--SBE-EEEEETTSEEEE
T ss_pred hhhhhcc---------cCcccccchhhCCHHHHHHHHHHHHHhCCCCEE-EEEEEEEEEecC--CEE-EEEEECCCCEEE
Confidence 2211110 0000011123567777777776654 36788 567999998764 443 678888898899
Q ss_pred ccEEEecCCCchhhhhhh
Q 044609 155 AKVLIGCDGVHSMVAQWL 172 (232)
Q Consensus 155 a~~vV~A~G~~S~~r~~~ 172 (232)
||.||+|+|.+|..+...
T Consensus 170 Ad~VVLATGt~s~~~~i~ 187 (651)
T 3ces_A 170 AKAVVLTVGTFLDGKIHI 187 (651)
T ss_dssp EEEEEECCSTTTCCEEEC
T ss_pred CCEEEEcCCCCccCcccc
Confidence 999999999998655443
No 57
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=99.61 E-value=1e-14 Score=104.08 Aligned_cols=116 Identities=22% Similarity=0.336 Sum_probs=84.4
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCcEEEEecCCCCcCcceeeeecccHHHHHHHcCChHHHHhhccCceeeEEEEcCCCc
Q 044609 6 EDVVIIGAGIAGLATAVALRRLGIKALVLEKSDGLRATGAALTLSPNAWLALDALGVSHKLTSVYAPAKRVFVTNLGTGA 85 (232)
Q Consensus 6 ~dV~IvG~G~~G~~~A~~L~~~g~~v~viE~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 85 (232)
+||+|||||++|+.+|..|++.|.+|+++|+.+..-... ..+
T Consensus 2 ~~vvIIGgG~~Gl~~A~~l~~~g~~v~lie~~~~~~~~~--------------------------~~~------------ 43 (180)
T 2ywl_A 2 WDVIVVGGGPSGLSAALFLARAGLKVLVLDGGRSKVKGV--------------------------SRV------------ 43 (180)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEECSCCTTTTC--------------------------SCC------------
T ss_pred CeEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCcccCc--------------------------hhh------------
Confidence 699999999999999999999999999999986321100 000
Q ss_pred eeEEeccCCCCCCCCceeeeehHHHHHHHhhhCC--CCeEEeCceEEEEEecCCCCCccEEEEeCCCcEEEccEEEecCC
Q 044609 86 TQELSYAGKSGRIGSGLRSVHRQSLLEALADELP--DDTIQFSSKIAAIDSQTLNGSSAAIINLGDSTIIKAKVLIGCDG 163 (232)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~--~~~i~~~~~v~~i~~~~~~g~~~~~v~~~~g~~~~a~~vV~A~G 163 (232)
..++.. + ..+....+.+.+.+.+. +++++++ +|++++.++ .. +.+.+.+| ++.||.||.|+|
T Consensus 44 ---~~~~~~----~---~~~~~~~~~~~l~~~~~~~gv~v~~~-~v~~i~~~~---~~-~~v~~~~g-~i~ad~vI~A~G 107 (180)
T 2ywl_A 44 ---PNYPGL----L---DEPSGEELLRRLEAHARRYGAEVRPG-VVKGVRDMG---GV-FEVETEEG-VEKAERLLLCTH 107 (180)
T ss_dssp ---CCSTTC----T---TCCCHHHHHHHHHHHHHHTTCEEEEC-CCCEEEECS---SS-EEEECSSC-EEEEEEEEECCT
T ss_pred ---hccCCC----c---CCCCHHHHHHHHHHHHHHcCCEEEeC-EEEEEEEcC---CE-EEEEECCC-EEEECEEEECCC
Confidence 000000 0 01334556666655543 7899999 999998764 33 77888888 899999999999
Q ss_pred CchhhhhhhcCC
Q 044609 164 VHSMVAQWLGLS 175 (232)
Q Consensus 164 ~~S~~r~~~~~~ 175 (232)
..+.+++.++++
T Consensus 108 ~~~~~~~~~g~~ 119 (180)
T 2ywl_A 108 KDPTLPSLLGLT 119 (180)
T ss_dssp TCCHHHHHHTCC
T ss_pred CCCCccccCCCC
Confidence 999888888765
No 58
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=99.61 E-value=3.4e-15 Score=115.72 Aligned_cols=134 Identities=21% Similarity=0.303 Sum_probs=84.5
Q ss_pred ccccEEEECCCHHHHHHHHHHHhC--CCcEEEEecCCCCcCcc-------eeeeecccHHHHHHHcCChHHHHhhccCce
Q 044609 4 VEEDVVIIGAGIAGLATAVALRRL--GIKALVLEKSDGLRATG-------AALTLSPNAWLALDALGVSHKLTSVYAPAK 74 (232)
Q Consensus 4 ~~~dV~IvG~G~~G~~~A~~L~~~--g~~v~viE~~~~~~~~~-------~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~ 74 (232)
.++||+|||||++|+++|+.|+++ |++|+|||+...++... ......+...+.++++|+...
T Consensus 78 ~~~DVvIVGgG~AGL~aA~~La~~~~G~~V~LiEk~~~~GGg~~~~g~~~~~~~~~~~~~~~L~~~Gv~~~--------- 148 (344)
T 3jsk_A 78 AETDIVIVGAGSCGLSAAYVLSTLRPDLRITIVEAGVAPGGGAWLGGQLFSAMVMRKPADVFLDEVGVPYE--------- 148 (344)
T ss_dssp HBCSEEEECCSHHHHHHHHHHHHHCTTSCEEEEESSSSCCTTTTCCBTTCCCEEEETTTHHHHHHHTCCCE---------
T ss_pred CcCCEEEECccHHHHHHHHHHHhcCCCCEEEEEeCCCccCCccccCCccchhhhcchHHHHHHHHcCCccc---------
Confidence 358999999999999999999997 99999999987663211 112223444555555554210
Q ss_pred eeEEEEcCCCceeEEeccCCCCCCCCceeeeehHHHHHHHhhhC---CCCeEEeCceEEEEEecCC--------------
Q 044609 75 RVFVTNLGTGATQELSYAGKSGRIGSGLRSVHRQSLLEALADEL---PDDTIQFSSKIAAIDSQTL-------------- 137 (232)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~---~~~~i~~~~~v~~i~~~~~-------------- 137 (232)
. .+.. ....+...+.+.|.+.+ ++++++++++|+++..+++
T Consensus 149 ~-------~G~~---------------~~~~~~~d~~~~L~~~a~~~~gV~i~~~~~V~dLi~~~d~~~~~~~~~~g~~~ 206 (344)
T 3jsk_A 149 D-------EGDY---------------VVVKHAALFTSTVLSKVLQRPNVKLFNATTVEDLITRKHHAESSSSSDDGEAE 206 (344)
T ss_dssp E-------CSSE---------------EEESCHHHHHHHHHHHHHTCTTEEEEETEEEEEEEEEEC--------------
T ss_pred c-------cCCe---------------EEEecHHHHHHHHHHHHHhCCCCEEEeCCEEEEEEecCCcccccccccccccc
Confidence 0 0000 00112345555555443 3789999999999987541
Q ss_pred -CC-CccEEEEe------CC--------CcEEEccEEEecCCCchhh
Q 044609 138 -NG-SSAAIINL------GD--------STIIKAKVLIGCDGVHSMV 168 (232)
Q Consensus 138 -~g-~~~~~v~~------~~--------g~~~~a~~vV~A~G~~S~~ 168 (232)
.+ ..+..|.. .+ ..+++|++||+|||+.|.+
T Consensus 207 ~~g~~rV~GVv~~~~~v~~~g~~~~~~d~~~i~Ak~VV~ATG~~s~v 253 (344)
T 3jsk_A 207 DEAKVRIAGVVTNWTLVSMHHDDQSAMDPNTINAPVIISTTGHDGPF 253 (344)
T ss_dssp --CCEEEEEEEEEEHHHHTTSSSSSCCBCEEEECSEEEECCCSSSSS
T ss_pred cCCCceEeEEEeeeeeeeccCCcccccCceEEEcCEEEECCCCCchh
Confidence 01 12123322 12 2479999999999999984
No 59
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=99.61 E-value=7.4e-15 Score=122.56 Aligned_cols=68 Identities=13% Similarity=0.007 Sum_probs=50.0
Q ss_pred eeehHHHHHHHhhhCC--CCeEEeCceEEEEEecCCCCCccEEEEeC---CCc--EEEccEEEecCCCch-hhhhhhcC
Q 044609 104 SVHRQSLLEALADELP--DDTIQFSSKIAAIDSQTLNGSSAAIINLG---DST--IIKAKVLIGCDGVHS-MVAQWLGL 174 (232)
Q Consensus 104 ~~~~~~l~~~l~~~~~--~~~i~~~~~v~~i~~~~~~g~~~~~v~~~---~g~--~~~a~~vV~A~G~~S-~~r~~~~~ 174 (232)
.++...+...+.+.+. |++++.+++|+++..++ +.. +.|.+. +++ ++.||.||+|+|.|| .+++..+.
T Consensus 184 ~v~~~~l~~~l~~~a~~~Ga~i~~~t~V~~l~~~~--~~v-~gV~~~d~~tg~~~~i~A~~VV~AaG~ws~~l~~~~g~ 259 (571)
T 2rgh_A 184 RNNDARLVIDNIKKAAEDGAYLVSKMKAVGFLYEG--DQI-VGVKARDLLTDEVIEIKAKLVINTSGPWVDKVRNLNFT 259 (571)
T ss_dssp ECCHHHHHHHHHHHHHHTTCEEESSEEEEEEEEET--TEE-EEEEEEETTTCCEEEEEBSCEEECCGGGHHHHHTTCCS
T ss_pred eEchHHHHHHHHHHHHHcCCeEEeccEEEEEEEeC--CEE-EEEEEEEcCCCCEEEEEcCEEEECCChhHHHHHHhhcc
Confidence 4567777777776553 89999999999998864 343 455542 333 799999999999998 45666554
No 60
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=99.61 E-value=2.4e-15 Score=118.86 Aligned_cols=122 Identities=17% Similarity=0.256 Sum_probs=85.4
Q ss_pred ccccEEEECCCHHHHHHHHHHHhCCCcEEEEecCCCCcCcceeeeecccHHHHHHHcCChHHHHhhccCceeeEEEEcCC
Q 044609 4 VEEDVVIIGAGIAGLATAVALRRLGIKALVLEKSDGLRATGAALTLSPNAWLALDALGVSHKLTSVYAPAKRVFVTNLGT 83 (232)
Q Consensus 4 ~~~dV~IvG~G~~G~~~A~~L~~~g~~v~viE~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~ 83 (232)
+.+||+|||||++|+++|+.|++.|++|+|||+.+.++.. .. .+ .+.. ..
T Consensus 13 ~~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gg~------------~~-~~----------~~~~--~~----- 62 (360)
T 3ab1_A 13 DMRDLTIIGGGPTGIFAAFQCGMNNISCRIIESMPQLGGQ------------LA-AL----------YPEK--HI----- 62 (360)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHH------------HH-HT----------CTTS--EE-----
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCCEEEEecCCCCCCc------------cc-cc----------CCCc--cc-----
Confidence 3589999999999999999999999999999998765211 00 00 0000 00
Q ss_pred CceeEEeccCCCCCCCCceeeeehHHHHHHHhhhCC--CCeEEeCceEEEEEecCCCCCccEEEEeCCCcEEEccEEEec
Q 044609 84 GATQELSYAGKSGRIGSGLRSVHRQSLLEALADELP--DDTIQFSSKIAAIDSQTLNGSSAAIINLGDSTIIKAKVLIGC 161 (232)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~--~~~i~~~~~v~~i~~~~~~g~~~~~v~~~~g~~~~a~~vV~A 161 (232)
+..+ + ...+.+..+.+.|.+.+. +++++++++|+++..++ ... +.|.+.+|.++.+|.||+|
T Consensus 63 -----~~~~---~-----~~~~~~~~~~~~l~~~~~~~~~~~~~~~~v~~i~~~~--~~~-~~v~~~~g~~~~~~~li~A 126 (360)
T 3ab1_A 63 -----YDVA---G-----FPEVPAIDLVESLWAQAERYNPDVVLNETVTKYTKLD--DGT-FETRTNTGNVYRSRAVLIA 126 (360)
T ss_dssp -----CCST---T-----CSSEEHHHHHHHHHHHHHTTCCEEECSCCEEEEEECT--TSC-EEEEETTSCEEEEEEEEEC
T ss_pred -----ccCC---C-----CCCCCHHHHHHHHHHHHHHhCCEEEcCCEEEEEEECC--Cce-EEEEECCCcEEEeeEEEEc
Confidence 0011 0 112456677777666543 68899999999998864 224 8888889988999999999
Q ss_pred CCCchhhhhh
Q 044609 162 DGVHSMVAQW 171 (232)
Q Consensus 162 ~G~~S~~r~~ 171 (232)
+|..|..++.
T Consensus 127 tG~~~~~~~~ 136 (360)
T 3ab1_A 127 AGLGAFEPRK 136 (360)
T ss_dssp CTTCSCCBCC
T ss_pred cCCCcCCCCC
Confidence 9997754433
No 61
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=99.60 E-value=1.7e-14 Score=120.58 Aligned_cols=153 Identities=17% Similarity=0.160 Sum_probs=88.4
Q ss_pred ccccEEEECCCHHHHHHHHHHHhCCCcEEEEecCCCCcCc----ceeeeecccHHHHHHHcCChHHH-------------
Q 044609 4 VEEDVVIIGAGIAGLATAVALRRLGIKALVLEKSDGLRAT----GAALTLSPNAWLALDALGVSHKL------------- 66 (232)
Q Consensus 4 ~~~dV~IvG~G~~G~~~A~~L~~~g~~v~viE~~~~~~~~----~~~~~~~~~~~~~l~~~g~~~~~------------- 66 (232)
.++||+|||||++|+++|+.|+++|++|+||||.+..+.. +.++.... ....+++|+.+..
T Consensus 125 ~~~DVvVVGaG~aGl~aA~~la~~G~~V~vlEk~~~~gg~s~~a~gg~~~~~--~~~~~~~g~~ds~~~~~~~~~~~g~~ 202 (571)
T 1y0p_A 125 DTVDVVVVGSGGAGFSAAISATDSGAKVILIEKEPVIGGNAKLAAGGMNAAW--TDQQKAKKITDSPELMFEDTMKGGQN 202 (571)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTTGGGCCSCEECSS--CHHHHHTTCCCCHHHHHHHHHHHTTT
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCCCCchhhcCceEEeCC--CHHHHHhCCCCCHHHHHHHHHHhcCC
Confidence 3589999999999999999999999999999999876422 12222111 1222333321111
Q ss_pred ---------------------HhhccCceeeEEEEcCCCceeEEeccCCCCCCCCceeeeehHHHHHHHhhhCC--CCeE
Q 044609 67 ---------------------TSVYAPAKRVFVTNLGTGATQELSYAGKSGRIGSGLRSVHRQSLLEALADELP--DDTI 123 (232)
Q Consensus 67 ---------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~--~~~i 123 (232)
...+.++.. . ....+.. +.... .+.........+.+.|.+.+. ++++
T Consensus 203 ~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~--~-~~~~g~~----~~r~~---~~~~g~~~g~~l~~~L~~~~~~~gv~i 272 (571)
T 1y0p_A 203 INDPALVKVLSSHSKDSVDWMTAMGADLTD--V-GMMGGAS----VNRAH---RPTGGAGVGAHVVQVLYDNAVKRNIDL 272 (571)
T ss_dssp CSCHHHHHHHHHHHHHHHHHHHHTTCCCCE--E-ECCTTCS----SCCEE---ESTTTCCHHHHHHHHHHHHHHHTTCEE
T ss_pred CCCHHHHHHHHHccHHHHHHHHhcCCCCcc--C-cccCCcC----CCeeE---ecCCCCCCHHHHHHHHHHHHHhcCCEE
Confidence 011111110 0 0000000 00000 000001234567777776653 8999
Q ss_pred EeCceEEEEEecCCCCCccEEEEe--CCCc--EEEccEEEecCCCchhhhh
Q 044609 124 QFSSKIAAIDSQTLNGSSAAIINL--GDST--IIKAKVLIGCDGVHSMVAQ 170 (232)
Q Consensus 124 ~~~~~v~~i~~~~~~g~~~~~v~~--~~g~--~~~a~~vV~A~G~~S~~r~ 170 (232)
+++++|+++..+++ +.. +.|.. .+|+ ++.||.||+|+|.+|..++
T Consensus 273 ~~~~~v~~l~~~~~-g~v-~Gv~~~~~~g~~~~i~a~~VVlAtGg~~~n~~ 321 (571)
T 1y0p_A 273 RMNTRGIEVLKDDK-GTV-KGILVKGMYKGYYWVKADAVILATGGFAKNNE 321 (571)
T ss_dssp ESSEEEEEEEECTT-SCE-EEEEEEETTTEEEEEECSEEEECCCCCTTCHH
T ss_pred EeCCEeeEeEEcCC-CeE-EEEEEEeCCCcEEEEECCeEEEeCCCcccCHH
Confidence 99999999987642 332 33443 3665 7899999999999986443
No 62
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=99.60 E-value=5.3e-15 Score=122.83 Aligned_cols=149 Identities=20% Similarity=0.178 Sum_probs=91.5
Q ss_pred ccccEEEECCCHHHHHHHHHHHhCCCcEEEEecCC-CCcCcceeeeec----ccHHHHHHHcCC-hHHHHhhccCceeeE
Q 044609 4 VEEDVVIIGAGIAGLATAVALRRLGIKALVLEKSD-GLRATGAALTLS----PNAWLALDALGV-SHKLTSVYAPAKRVF 77 (232)
Q Consensus 4 ~~~dV~IvG~G~~G~~~A~~L~~~g~~v~viE~~~-~~~~~~~~~~~~----~~~~~~l~~~g~-~~~~~~~~~~~~~~~ 77 (232)
.++||+|||||++|+++|+.|++.|.+|+|||+.. ..+..++..... ....+.++.+|- ....... ..+.
T Consensus 26 ~~yDVIVIGgG~AGl~AAlalAr~G~kVlLIEk~~~~iG~~~Cnps~GGia~g~lv~eldalgg~~~~~~d~----~gi~ 101 (637)
T 2zxi_A 26 DEFDVVVIGGGHAGIEAALAAARMGAKTAMFVLNADTIGQMSCNPAIGGIAKGIVVREIDALGGEMGKAIDQ----TGIQ 101 (637)
T ss_dssp GCCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCCSCSEEECTTHHHHHHHHHHHTCSHHHHHHH----HEEE
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCCEEEEEecccccCCcCccccccccchHHHHHHHHHhhhHHHHHhhh----cccc
Confidence 45899999999999999999999999999999974 232222111111 112333344432 2211110 1122
Q ss_pred EEEcCCCceeEEeccCCCCCCCCceeeeehHHHHHHHhhhC---CCCeEEeCceEEEEEecCCCCCccEEEEeCCCcEEE
Q 044609 78 VTNLGTGATQELSYAGKSGRIGSGLRSVHRQSLLEALADEL---PDDTIQFSSKIAAIDSQTLNGSSAAIINLGDSTIIK 154 (232)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~---~~~~i~~~~~v~~i~~~~~~g~~~~~v~~~~g~~~~ 154 (232)
+....... .... ......+++..+.+.|.+.+ +++++ ++++|+++..++ +.. ..|.+.+|.++.
T Consensus 102 f~~l~~~k-------Gpav--~~~r~~~Dr~~~~~~L~~~Le~~~GVeI-~~~~Vt~L~~e~--g~V-~GV~t~dG~~i~ 168 (637)
T 2zxi_A 102 FKMLNTRK-------GKAV--QSPRAQADKKRYREYMKKVCENQENLYI-KQEEVVDIIVKN--NQV-VGVRTNLGVEYK 168 (637)
T ss_dssp EEEESTTS-------CGGG--CEEEEEECHHHHHHHHHHHHHTCTTEEE-EESCEEEEEESS--SBE-EEEEETTSCEEE
T ss_pred eeeccccc-------Cccc--cchhhhCCHHHHHHHHHHHHHhCCCCEE-EEeEEEEEEecC--CEE-EEEEECCCcEEE
Confidence 22111100 0000 11123567777777777654 36788 567999998764 443 678889999999
Q ss_pred ccEEEecCCCchhhh
Q 044609 155 AKVLIGCDGVHSMVA 169 (232)
Q Consensus 155 a~~vV~A~G~~S~~r 169 (232)
||.||+|+|.++..+
T Consensus 169 AdaVVLATG~~s~~~ 183 (637)
T 2zxi_A 169 TKAVVVTTGTFLNGV 183 (637)
T ss_dssp CSEEEECCTTCBTCE
T ss_pred eCEEEEccCCCccCc
Confidence 999999999987544
No 63
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=99.59 E-value=5.6e-15 Score=123.03 Aligned_cols=148 Identities=17% Similarity=0.197 Sum_probs=89.0
Q ss_pred ccccEEEECCCHHHHHHHHHHHhCCCcEEEEecCCC-CcCcceeeeecc-cHHHHHHH---cC-ChHHHHhhccCceeeE
Q 044609 4 VEEDVVIIGAGIAGLATAVALRRLGIKALVLEKSDG-LRATGAALTLSP-NAWLALDA---LG-VSHKLTSVYAPAKRVF 77 (232)
Q Consensus 4 ~~~dV~IvG~G~~G~~~A~~L~~~g~~v~viE~~~~-~~~~~~~~~~~~-~~~~~l~~---~g-~~~~~~~~~~~~~~~~ 77 (232)
.+|||+|||||++|+++|+.|++.|.+|+|+|+... .+..++...... ....++++ ++ +....... ..+.
T Consensus 20 ~~yDVIVIGgG~AGl~AAlaLAr~G~kVlLIEk~~~~iG~~~c~ps~gGia~~~lv~el~al~g~~~~~~d~----~gi~ 95 (641)
T 3cp8_A 20 HMYDVIVVGAGHAGCEAALAVARGGLHCLLITSDLSAVARMSCNPAIGGVAKGQITREIDALGGEMGKAIDA----TGIQ 95 (641)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCSSCSEEECHHHHHHHHHHHHHTCSHHHHHHH----HEEE
T ss_pred CcCCEEEECccHHHHHHHHHHHHCCCcEEEEEecccccCCCccccchhhhhHHHHHHHHHhcccHHHHHHHh----cCCc
Confidence 459999999999999999999999999999999752 222222111111 11223332 22 11111110 1122
Q ss_pred EEEcCCCceeEEeccCCCCCCCCceeeeehHHHHHHHhhhC---CCCeEEeCceEEEEEecCCCCCccEEEEeCCCcEEE
Q 044609 78 VTNLGTGATQELSYAGKSGRIGSGLRSVHRQSLLEALADEL---PDDTIQFSSKIAAIDSQTLNGSSAAIINLGDSTIIK 154 (232)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~---~~~~i~~~~~v~~i~~~~~~g~~~~~v~~~~g~~~~ 154 (232)
+...... ...........+++..+.+.|.+.+ ++++++ +.+|+++..++ +.. ..|.+.+|.++.
T Consensus 96 f~~l~~~---------kgpav~~~r~~~Dr~~l~~~L~~~l~~~~GV~I~-~~~V~~L~~d~--g~V-~GV~t~~G~~i~ 162 (641)
T 3cp8_A 96 FRMLNRS---------KGPAMHSPRAQADKTQYSLYMRRIVEHEPNIDLL-QDTVIGVSANS--GKF-SSVTVRSGRAIQ 162 (641)
T ss_dssp EEEECSS---------SCTTTCEEEEEECHHHHHHHHHHHHHTCTTEEEE-ECCEEEEEEET--TEE-EEEEETTSCEEE
T ss_pred hhhcccc---------cCccccchhhhcCHHHHHHHHHHHHHhCCCCEEE-eeEEEEEEecC--CEE-EEEEECCCcEEE
Confidence 2111110 0000011123577878777777655 377885 45899988764 342 458888998999
Q ss_pred ccEEEecCCCchhh
Q 044609 155 AKVLIGCDGVHSMV 168 (232)
Q Consensus 155 a~~vV~A~G~~S~~ 168 (232)
||.||+|+|.++..
T Consensus 163 Ad~VVLATG~~s~~ 176 (641)
T 3cp8_A 163 AKAAILACGTFLNG 176 (641)
T ss_dssp EEEEEECCTTCBTC
T ss_pred eCEEEECcCCCCCc
Confidence 99999999998753
No 64
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=99.58 E-value=2.7e-14 Score=110.28 Aligned_cols=112 Identities=19% Similarity=0.246 Sum_probs=70.9
Q ss_pred cccccEEEECCCHHHHHHHHHHHhCCCcEEEEecCCCCcCcceeeeecccHHHHHHHcCChHHHHhhccCceeeEEEEcC
Q 044609 3 MVEEDVVIIGAGIAGLATAVALRRLGIKALVLEKSDGLRATGAALTLSPNAWLALDALGVSHKLTSVYAPAKRVFVTNLG 82 (232)
Q Consensus 3 ~~~~dV~IvG~G~~G~~~A~~L~~~g~~v~viE~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~ 82 (232)
|++|||+||||||+|+++|+.|+|.|++|+|||++..- +. +. ...
T Consensus 4 M~~yDVvIIGaGpAGlsAA~~lar~g~~v~lie~~~~g---g~----------------~~----~~~------------ 48 (304)
T 4fk1_A 4 MKYIDCAVIGAGPAGLNASLVLGRARKQIALFDNNTNR---NR----------------VT----QNS------------ 48 (304)
T ss_dssp --CEEEEEECCSHHHHHHHHHHHHTTCCEEEEECSCCG---GG----------------GS----SCB------------
T ss_pred CCCcCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCC---Ce----------------ee----eec------------
Confidence 56799999999999999999999999999999986421 10 00 000
Q ss_pred CCceeEEeccCCCCCCCCceeeeehHHHHHHHhhhC-C-CCeEEeCceEEEEEecCCCCCccEEEEeCCCcEEEccEEEe
Q 044609 83 TGATQELSYAGKSGRIGSGLRSVHRQSLLEALADEL-P-DDTIQFSSKIAAIDSQTLNGSSAAIINLGDSTIIKAKVLIG 160 (232)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~-~-~~~i~~~~~v~~i~~~~~~g~~~~~v~~~~g~~~~a~~vV~ 160 (232)
. .+.... .+....+.+.+.+.+ + +...+....+..+...+ ... +.+.+.+|+++.+|.||+
T Consensus 49 ~------~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~-~~v~~~~g~~~~a~~lii 111 (304)
T 4fk1_A 49 H------GFITRD--------GIKPEEFKEIGLNEVMKYPSVHYYEKTVVMITKQS--TGL-FEIVTKDHTKYLAERVLL 111 (304)
T ss_dssp C------CSTTCT--------TBCHHHHHHHHHHHHTTSTTEEEEECCEEEEEECT--TSC-EEEEETTCCEEEEEEEEE
T ss_pred C------CccCCC--------CCCHHHHHHHHHHHHHhcCCEEEEeeEEEEeeecC--CCc-EEEEECCCCEEEeCEEEE
Confidence 0 000000 123344444443332 2 33334445566665543 233 788899999999999999
Q ss_pred cCCCch
Q 044609 161 CDGVHS 166 (232)
Q Consensus 161 A~G~~S 166 (232)
|+|...
T Consensus 112 ATGs~p 117 (304)
T 4fk1_A 112 ATGMQE 117 (304)
T ss_dssp CCCCEE
T ss_pred ccCCcc
Confidence 999864
No 65
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=99.58 E-value=2.2e-14 Score=118.85 Aligned_cols=135 Identities=20% Similarity=0.241 Sum_probs=87.5
Q ss_pred ccccEEEECCCHHHHHHHHHHH-hCCCcEEEEecCCCCcCcceeeeecccHHHHHHHcCChHHHHhhccCceeeEEEEcC
Q 044609 4 VEEDVVIIGAGIAGLATAVALR-RLGIKALVLEKSDGLRATGAALTLSPNAWLALDALGVSHKLTSVYAPAKRVFVTNLG 82 (232)
Q Consensus 4 ~~~dV~IvG~G~~G~~~A~~L~-~~g~~v~viE~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~ 82 (232)
+++||+|||||++|+++|..|+ +.|++|+|||+.+..+... ......|+..++..
T Consensus 7 ~~~dVvIIGaG~aGl~aA~~L~~~~G~~v~viE~~~~~GGtw----------~~~~ypg~~~d~~s-------------- 62 (540)
T 3gwf_A 7 HTVDAVVIGAGFGGIYAVHKLHHELGLTTVGFDKADGPGGTW----------YWNRYPGALSDTES-------------- 62 (540)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCCEEEEESSSSSCTHH----------HHCCCTTCEEEEEG--------------
T ss_pred CCCCEEEECcCHHHHHHHHHHHHcCCCCEEEEECCCCCCCcc----------cccCCCCceecCCc--------------
Confidence 4589999999999999999999 8999999999987653210 00000000000000
Q ss_pred CCceeEEeccCC--CCCCCCceeeeehHHHHHHHhhhCC--CC--eEEeCceEEEEEecCCCCCccEEEEeCCCcEEEcc
Q 044609 83 TGATQELSYAGK--SGRIGSGLRSVHRQSLLEALADELP--DD--TIQFSSKIAAIDSQTLNGSSAAIINLGDSTIIKAK 156 (232)
Q Consensus 83 ~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~l~~~~~--~~--~i~~~~~v~~i~~~~~~g~~~~~v~~~~g~~~~a~ 156 (232)
....+.+... .. +........+.++.+.+.+.+. ++ +++++++|+++..+++ +.. +.|++.+|+++.||
T Consensus 63 --~~~~~~~~~~~~~~-~~~~~~~~~~~ei~~~l~~~~~~~g~~~~i~~~~~V~~i~~~~~-~~~-~~V~~~~G~~i~ad 137 (540)
T 3gwf_A 63 --HLYRFSFDRDLLQE-STWKTTYITQPEILEYLEDVVDRFDLRRHFKFGTEVTSALYLDD-ENL-WEVTTDHGEVYRAK 137 (540)
T ss_dssp --GGSSCCSCHHHHHH-CCCSBSEEEHHHHHHHHHHHHHHTTCGGGEEESCCEEEEEEETT-TTE-EEEEETTSCEEEEE
T ss_pred --ceeeeccccccccC-CCCcccCCCHHHHHHHHHHHHHHcCCcceeEeccEEEEEEEeCC-CCE-EEEEEcCCCEEEeC
Confidence 0000000000 00 0111235677777777766553 55 8999999999998753 334 88999999999999
Q ss_pred EEEecCCCchh
Q 044609 157 VLIGCDGVHSM 167 (232)
Q Consensus 157 ~vV~A~G~~S~ 167 (232)
.||+|+|.+|.
T Consensus 138 ~lV~AtG~~s~ 148 (540)
T 3gwf_A 138 YVVNAVGLLSA 148 (540)
T ss_dssp EEEECCCSCCS
T ss_pred EEEECCccccc
Confidence 99999998763
No 66
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=99.56 E-value=5.3e-14 Score=114.86 Aligned_cols=55 Identities=15% Similarity=0.223 Sum_probs=45.5
Q ss_pred HHHHHHhhhCCCCeEEeCceEEEEEecCCCCCccEEEEeCCCcEEEccEEEecCCCchh
Q 044609 109 SLLEALADELPDDTIQFSSKIAAIDSQTLNGSSAAIINLGDSTIIKAKVLIGCDGVHSM 167 (232)
Q Consensus 109 ~l~~~l~~~~~~~~i~~~~~v~~i~~~~~~g~~~~~v~~~~g~~~~a~~vV~A~G~~S~ 167 (232)
.+.+.|.+.++.++++++++|++|+.++ .. +.|++.+|+++.||.||.|...+..
T Consensus 236 ~l~~~l~~~l~~~~i~~~~~V~~i~~~~---~~-~~v~~~~g~~~~ad~vi~a~p~~~~ 290 (470)
T 3i6d_A 236 TLVEEIEKQLKLTKVYKGTKVTKLSHSG---SC-YSLELDNGVTLDADSVIVTAPHKAA 290 (470)
T ss_dssp HHHHHHHHTCCSEEEECSCCEEEEEECS---SS-EEEEESSSCEEEESEEEECSCHHHH
T ss_pred HHHHHHHHhcCCCEEEeCCceEEEEEcC---Ce-EEEEECCCCEEECCEEEECCCHHHH
Confidence 6677777766557899999999999874 34 8899999988999999999988764
No 67
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=99.55 E-value=1.5e-14 Score=117.55 Aligned_cols=153 Identities=18% Similarity=0.191 Sum_probs=84.8
Q ss_pred ccccEEEECCCHHHHHHHHHHHhCCC--cEEEEecCCCCcCcceeeeecccHHHHHHHcCChHHHHhh-ccCcee-----
Q 044609 4 VEEDVVIIGAGIAGLATAVALRRLGI--KALVLEKSDGLRATGAALTLSPNAWLALDALGVSHKLTSV-YAPAKR----- 75 (232)
Q Consensus 4 ~~~dV~IvG~G~~G~~~A~~L~~~g~--~v~viE~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~-~~~~~~----- 75 (232)
+.+||+|||||++|+++|..|++.|+ +|+|||+.+.++.... ...... ..+++....... ..++..
T Consensus 5 ~~~dV~IIGaG~aGl~aA~~L~~~G~~~~V~v~E~~~~~GG~~~---~~~~~~---~~~~ip~~~~~~~~~~~~~g~~~~ 78 (447)
T 2gv8_A 5 TIRKIAIIGAGPSGLVTAKALLAEKAFDQVTLFERRGSPGGVWN---YTSTLS---NKLPVPSTNPILTTEPIVGPAALP 78 (447)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHTTTCCSEEEEECSSSSSSTTCS---CCSCCC---SCCCSSBCCTTCCCCCBCCSSSCC
T ss_pred CCCEEEEECccHHHHHHHHHHHhcCCCCCeEEEecCCCCCCeec---CCCCCC---cccccccccccccccccccccccC
Confidence 56899999999999999999999999 9999999876532110 000000 000000000000 000000
Q ss_pred ---eEEEE-cCCCce-eEEeccCCCCCCCCceeeeehHHHHHHHhhhCC--CCeEEeCceEEEEEecCCCCCccEEEEeC
Q 044609 76 ---VFVTN-LGTGAT-QELSYAGKSGRIGSGLRSVHRQSLLEALADELP--DDTIQFSSKIAAIDSQTLNGSSAAIINLG 148 (232)
Q Consensus 76 ---~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~--~~~i~~~~~v~~i~~~~~~g~~~~~v~~~ 148 (232)
...+. ...... ....+...... ........+..+.+.|.+.+. +..++++++|+++...+ .. +.|++.
T Consensus 79 ~~~~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~l~~~~~~~~~~i~~~t~V~~v~~~~---~~-~~V~~~ 153 (447)
T 2gv8_A 79 VYPSPLYRDLQTNTPIELMGYCDQSFK-PQTLQFPHRHTIQEYQRIYAQPLLPFIKLATDVLDIEKKD---GS-WVVTYK 153 (447)
T ss_dssp BCCCCCCTTCBCSSCHHHHSCTTCCCC-TTCCSSCBHHHHHHHHHHHHGGGGGGEECSEEEEEEEEET---TE-EEEEEE
T ss_pred CccCchhhhhccCCCHHHhccCCCCCC-CCCCCCCCHHHHHHHHHHHHHHhhCeEEeCCEEEEEEeCC---Ce-EEEEEe
Confidence 00000 000000 00011100000 011224567788887776654 56789999999998763 33 667665
Q ss_pred C---Cc---EEEccEEEecCCCchh
Q 044609 149 D---ST---IIKAKVLIGCDGVHSM 167 (232)
Q Consensus 149 ~---g~---~~~a~~vV~A~G~~S~ 167 (232)
+ |+ ++.+|.||+|+|.+|.
T Consensus 154 ~~~~G~~~~~~~~d~VVvAtG~~s~ 178 (447)
T 2gv8_A 154 GTKAGSPISKDIFDAVSICNGHYEV 178 (447)
T ss_dssp ESSTTCCEEEEEESEEEECCCSSSS
T ss_pred ecCCCCeeEEEEeCEEEECCCCCCC
Confidence 4 66 7999999999999874
No 68
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=99.54 E-value=4.8e-14 Score=116.34 Aligned_cols=38 Identities=45% Similarity=0.719 Sum_probs=35.3
Q ss_pred ccccEEEECCCHHHHHHHHHHHhCCCcEEEEecCCCCc
Q 044609 4 VEEDVVIIGAGIAGLATAVALRRLGIKALVLEKSDGLR 41 (232)
Q Consensus 4 ~~~dV~IvG~G~~G~~~A~~L~~~g~~v~viE~~~~~~ 41 (232)
.++||+|||+|++|+++|+.|+++|.+|+||||.+..+
T Consensus 40 ~~~DVvVVGaG~AGl~AA~~aa~~G~~V~vlEk~~~~G 77 (510)
T 4at0_A 40 YEADVVVAGYGIAGVAASIEAARAGADVLVLERTSGWG 77 (510)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSC
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCCC
Confidence 45899999999999999999999999999999998764
No 69
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=99.53 E-value=1.3e-14 Score=113.37 Aligned_cols=120 Identities=20% Similarity=0.194 Sum_probs=78.8
Q ss_pred CcccccEEEECCCHHHHHHHHHHHhCCCcEEEEecCCCCcCcceeeeecccHHHHHHHcCChHHHHhhccCceeeEEEEc
Q 044609 2 EMVEEDVVIIGAGIAGLATAVALRRLGIKALVLEKSDGLRATGAALTLSPNAWLALDALGVSHKLTSVYAPAKRVFVTNL 81 (232)
Q Consensus 2 ~~~~~dV~IvG~G~~G~~~A~~L~~~g~~v~viE~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~ 81 (232)
.|+++||+|||||++|+++|..|++.|++|+|||+.........+. +... . ..
T Consensus 5 ~~~~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~~~~~~gg~------------------~~~~-~-----~~--- 57 (333)
T 1vdc_A 5 ETHNTRLCIVGSGPAAHTAAIYAARAELKPLLFEGWMANDIAPGGQ------------------LTTT-T-----DV--- 57 (333)
T ss_dssp EEEEEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSBTTBCTTCG------------------GGGC-S-----EE---
T ss_pred CCCCCCEEEECcCHHHHHHHHHHHHCCCeEEEEeccCccccCCCce------------------eeec-c-----cc---
Confidence 3456899999999999999999999999999999821100000000 0000 0 00
Q ss_pred CCCceeEEeccCCCCCCCCceeeeehHHHHHHHhhhCC--CCeEEeCceEEEEEecCCCCCccEEEEeCCCcEEEccEEE
Q 044609 82 GTGATQELSYAGKSGRIGSGLRSVHRQSLLEALADELP--DDTIQFSSKIAAIDSQTLNGSSAAIINLGDSTIIKAKVLI 159 (232)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~--~~~i~~~~~v~~i~~~~~~g~~~~~v~~~~g~~~~a~~vV 159 (232)
..++ + . ...+.+..+.+.|.+.+. +++++.++ |.++..++ .. +.|.+ ++.++.+|.||
T Consensus 58 -------~~~~---~--~--~~~~~~~~~~~~l~~~~~~~gv~~~~~~-v~~i~~~~---~~-~~v~~-~~~~~~~~~vv 117 (333)
T 1vdc_A 58 -------ENFP---G--F--PEGILGVELTDKFRKQSERFGTTIFTET-VTKVDFSS---KP-FKLFT-DSKAILADAVI 117 (333)
T ss_dssp -------CCST---T--C--TTCEEHHHHHHHHHHHHHHTTCEEECCC-CCEEECSS---SS-EEEEC-SSEEEEEEEEE
T ss_pred -------ccCC---C--C--ccCCCHHHHHHHHHHHHHHCCCEEEEeE-EEEEEEcC---CE-EEEEE-CCcEEEcCEEE
Confidence 0011 0 0 113556677777766543 78898886 88887653 33 67777 77889999999
Q ss_pred ecCCCchhh
Q 044609 160 GCDGVHSMV 168 (232)
Q Consensus 160 ~A~G~~S~~ 168 (232)
+|+|.++..
T Consensus 118 ~A~G~~~~~ 126 (333)
T 1vdc_A 118 LAIGAVAKR 126 (333)
T ss_dssp ECCCEEECC
T ss_pred ECCCCCcCC
Confidence 999998754
No 70
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=99.53 E-value=1.4e-14 Score=120.24 Aligned_cols=134 Identities=20% Similarity=0.257 Sum_probs=85.6
Q ss_pred ccccEEEECCCHHHHHHHHHHHhCCCcEEEEecCCCCcCcceeeeecccHHHHHHHcCChHHHHhhccCceeeEEEEcCC
Q 044609 4 VEEDVVIIGAGIAGLATAVALRRLGIKALVLEKSDGLRATGAALTLSPNAWLALDALGVSHKLTSVYAPAKRVFVTNLGT 83 (232)
Q Consensus 4 ~~~dV~IvG~G~~G~~~A~~L~~~g~~v~viE~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~ 83 (232)
+++||+|||||++|+++|..|++.|++|+|||+.+..+... ..-...|+..++....
T Consensus 20 ~~~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~~~GGtw----------~~~~ypg~~~dv~s~~------------- 76 (549)
T 4ap3_A 20 TSYDVVVVGAGIAGLYAIHRFRSQGLTVRAFEAASGVGGVW----------YWNRYPGARCDVESID------------- 76 (549)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHH----------HHCCCTTCBCSSCTTT-------------
T ss_pred CCCCEEEECchHHHHHHHHHHHhCCCCEEEEeCCCCCCCcc----------ccCCCCCceeCCCchh-------------
Confidence 45899999999999999999999999999999987653210 0000001100000000
Q ss_pred CceeEEeccCC--CCCCCCceeeeehHHHHHHHhhhCC--CC--eEEeCceEEEEEecCCCCCccEEEEeCCCcEEEccE
Q 044609 84 GATQELSYAGK--SGRIGSGLRSVHRQSLLEALADELP--DD--TIQFSSKIAAIDSQTLNGSSAAIINLGDSTIIKAKV 157 (232)
Q Consensus 84 ~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~l~~~~~--~~--~i~~~~~v~~i~~~~~~g~~~~~v~~~~g~~~~a~~ 157 (232)
....+... .. +........+.++.+.+.+.+. ++ +++++++|+++..+++ ... +.|++.+|+++.||.
T Consensus 77 ---y~~~f~~~~~~~-~~~~~~~~~~~ei~~yl~~~~~~~g~~~~i~~~~~V~~i~~~~~-~~~-w~V~~~~G~~i~ad~ 150 (549)
T 4ap3_A 77 ---YSYSFSPELEQE-WNWSEKYATQPEILAYLEHVADRFDLRRDIRFDTRVTSAVLDEE-GLR-WTVRTDRGDEVSARF 150 (549)
T ss_dssp ---SSCCSCHHHHHH-CCCSSSSCBHHHHHHHHHHHHHHTTCGGGEECSCCEEEEEEETT-TTE-EEEEETTCCEEEEEE
T ss_pred ---cccccccccccC-CCCccCCCCHHHHHHHHHHHHHHcCCCccEEECCEEEEEEEcCC-CCE-EEEEECCCCEEEeCE
Confidence 00000000 00 0011123456677776665443 44 7999999999998753 334 889999999999999
Q ss_pred EEecCCCch
Q 044609 158 LIGCDGVHS 166 (232)
Q Consensus 158 vV~A~G~~S 166 (232)
||+|+|.+|
T Consensus 151 lV~AtG~~s 159 (549)
T 4ap3_A 151 LVVAAGPLS 159 (549)
T ss_dssp EEECCCSEE
T ss_pred EEECcCCCC
Confidence 999999876
No 71
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=99.52 E-value=6.9e-14 Score=116.00 Aligned_cols=137 Identities=17% Similarity=0.183 Sum_probs=85.9
Q ss_pred cccccEEEECCCHHHHHHHHHHHhCCCcEEEEecCCCCcCcceeeeecccHHHHHHHcCChHHHHhhccCceeeEEEEcC
Q 044609 3 MVEEDVVIIGAGIAGLATAVALRRLGIKALVLEKSDGLRATGAALTLSPNAWLALDALGVSHKLTSVYAPAKRVFVTNLG 82 (232)
Q Consensus 3 ~~~~dV~IvG~G~~G~~~A~~L~~~g~~v~viE~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~ 82 (232)
++++||+|||||++|+++|..|++.|++|+|||+.+..+... ..-...|+. ....
T Consensus 7 ~~~~dVvIIGaG~aGl~aA~~L~~~g~~v~iiE~~~~~GGtw----------~~~~yPg~~-------~d~~-------- 61 (545)
T 3uox_A 7 SPALDAVVIGAGVTGIYQAFLINQAGMKVLGIEAGEDVGGTW----------YWNRYPGCR-------LDTE-------- 61 (545)
T ss_dssp CCSEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHH----------HHCCCTTCB-------CSSC--------
T ss_pred CCCCCEEEECccHHHHHHHHHHHhCCCCEEEEeCCCCCCCcc----------ccCCCCcee-------ecCc--------
Confidence 346899999999999999999999999999999987663210 000000000 0000
Q ss_pred CCceeEEeccCC-CCCCCCceeeeehHHHHHHHhhhCC--CC--eEEeCceEEEEEecCCCCCccEEEEeCCCcEEEccE
Q 044609 83 TGATQELSYAGK-SGRIGSGLRSVHRQSLLEALADELP--DD--TIQFSSKIAAIDSQTLNGSSAAIINLGDSTIIKAKV 157 (232)
Q Consensus 83 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~l~~~~~--~~--~i~~~~~v~~i~~~~~~g~~~~~v~~~~g~~~~a~~ 157 (232)
.....+.+... ...+........+.++.+.+.+.+. ++ .++++++|+++..+++ ... +.|++.+|+++.||+
T Consensus 62 -~~~y~~~f~~~~~~~~~~~~~~~~~~ei~~yl~~~~~~~~l~~~i~~~~~V~~~~~~~~-~~~-w~V~~~~G~~~~ad~ 138 (545)
T 3uox_A 62 -SYAYGYFALKGIIPEWEWSENFASQPEMLRYVNRAADAMDVRKHYRFNTRVTAARYVEN-DRL-WEVTLDNEEVVTCRF 138 (545)
T ss_dssp -HHHHCHHHHTTSSTTCCCSBSSCBHHHHHHHHHHHHHHHTCGGGEECSCCEEEEEEEGG-GTE-EEEEETTTEEEEEEE
T ss_pred -hhhcccccCcccccCCCccccCCCHHHHHHHHHHHHHHcCCcCcEEECCEEEEEEEeCC-CCE-EEEEECCCCEEEeCE
Confidence 00000000000 0000111223456666666665443 44 7999999999988653 234 889999999999999
Q ss_pred EEecCCCchh
Q 044609 158 LIGCDGVHSM 167 (232)
Q Consensus 158 vV~A~G~~S~ 167 (232)
||+|+|.+|.
T Consensus 139 lV~AtG~~s~ 148 (545)
T 3uox_A 139 LISATGPLSA 148 (545)
T ss_dssp EEECCCSCBC
T ss_pred EEECcCCCCC
Confidence 9999997763
No 72
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=99.52 E-value=8.8e-14 Score=115.60 Aligned_cols=135 Identities=20% Similarity=0.227 Sum_probs=84.6
Q ss_pred ccccEEEECCCHHHHHHHHHHHhCCCcEEEEecCCCCcCcceeeeecccHHHHHHHcCChHHHHhhccCceeeEEEEcCC
Q 044609 4 VEEDVVIIGAGIAGLATAVALRRLGIKALVLEKSDGLRATGAALTLSPNAWLALDALGVSHKLTSVYAPAKRVFVTNLGT 83 (232)
Q Consensus 4 ~~~dV~IvG~G~~G~~~A~~L~~~g~~v~viE~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~ 83 (232)
.++||+|||||++|+++|..|++.|++|+|||+.+..+... ..-...++.-+. ....
T Consensus 15 ~~~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~~~GG~w----------~~~~~pg~~~d~---~~~~---------- 71 (542)
T 1w4x_A 15 EEVDVLVVGAGFSGLYALYRLRELGRSVHVIETAGDVGGVW----------YWNRYPGARCDI---ESIE---------- 71 (542)
T ss_dssp SEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHH----------HHCCCTTCBCSS---CTTT----------
T ss_pred CCCCEEEECccHHHHHHHHHHHhCCCCEEEEeCCCCCCCcc----------cccCCCceeecc---cccc----------
Confidence 45899999999999999999999999999999987663211 000000000000 0000
Q ss_pred CceeEEeccCC--CCCCCCceeeeehHHHHHHHhhhC---C-CCeEEeCceEEEEEecCCCCCccEEEEeCCCcEEEccE
Q 044609 84 GATQELSYAGK--SGRIGSGLRSVHRQSLLEALADEL---P-DDTIQFSSKIAAIDSQTLNGSSAAIINLGDSTIIKAKV 157 (232)
Q Consensus 84 ~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~l~~~~---~-~~~i~~~~~v~~i~~~~~~g~~~~~v~~~~g~~~~a~~ 157 (232)
..+.+... .. +........+.++.+.|...+ . +.+++++++|+++..+++ +.. +.|++.+|++++||+
T Consensus 72 ---~~~~f~~~~~~~-~~~~~~~~~~~~i~~yl~~~~~~~~l~~~i~~~~~V~~~~~~~~-~~~-w~V~~~~G~~~~ad~ 145 (542)
T 1w4x_A 72 ---YCYSFSEEVLQE-WNWTERYASQPEILRYINFVADKFDLRSGITFHTTVTAAAFDEA-TNT-WTVDTNHGDRIRARY 145 (542)
T ss_dssp ---SSCCSCHHHHHH-CCCCBSSCBHHHHHHHHHHHHHHTTGGGGEECSCCEEEEEEETT-TTE-EEEEETTCCEEEEEE
T ss_pred ---cccccChhhhhc-cCcccccCCHHHHHHHHHHHHHHcCCCceEEcCcEEEEEEEcCC-CCe-EEEEECCCCEEEeCE
Confidence 00000000 00 000112345666666665433 2 367999999999988653 234 889999998999999
Q ss_pred EEecCCCchh
Q 044609 158 LIGCDGVHSM 167 (232)
Q Consensus 158 vV~A~G~~S~ 167 (232)
||+|+|.+|.
T Consensus 146 vV~AtG~~s~ 155 (542)
T 1w4x_A 146 LIMASGQLSV 155 (542)
T ss_dssp EEECCCSCCC
T ss_pred EEECcCCCCC
Confidence 9999999874
No 73
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=99.52 E-value=1.3e-13 Score=106.37 Aligned_cols=136 Identities=19% Similarity=0.327 Sum_probs=84.3
Q ss_pred cccEEEECCCHHHHHHHHHHHhC--CCcEEEEecCCCCcCcc-------eeeeecccHHHHHHHcCChHHHHhhccCcee
Q 044609 5 EEDVVIIGAGIAGLATAVALRRL--GIKALVLEKSDGLRATG-------AALTLSPNAWLALDALGVSHKLTSVYAPAKR 75 (232)
Q Consensus 5 ~~dV~IvG~G~~G~~~A~~L~~~--g~~v~viE~~~~~~~~~-------~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~ 75 (232)
++||+|||||++|+++|+.|+++ |++|+|+|+.+.++... ....+.....+.++++|+...
T Consensus 65 ~~dv~IiG~G~aGl~aA~~la~~~~g~~V~v~e~~~~~ggg~~~~g~~~~~~~~~~~~~~~L~~~Gv~~~---------- 134 (326)
T 2gjc_A 65 VSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGGSWLGGQLFSAMVMRKPAHLFLQELEIPYE---------- 134 (326)
T ss_dssp EESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSCCTTTTCCGGGCCCEEEETTTHHHHHHTTCCCE----------
T ss_pred cCCEEEECccHHHHHHHHHHHhcCCCCeEEEEecCccccccccccCcccchhhhhhHHHHHHHhhCcccc----------
Confidence 47999999999999999999998 99999999988764211 111222333444444442210
Q ss_pred eEEEEcCCCceeEEeccCCCCCCCCceeeeehHHHHHHHhhhC---CCCeEEeCceEEEEEecCCC--C--CccEEEEe-
Q 044609 76 VFVTNLGTGATQELSYAGKSGRIGSGLRSVHRQSLLEALADEL---PDDTIQFSSKIAAIDSQTLN--G--SSAAIINL- 147 (232)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~---~~~~i~~~~~v~~i~~~~~~--g--~~~~~v~~- 147 (232)
. .+.. ....+...+.+.|.+.+ ++++++.+++|+++..+++. + .. ..|..
T Consensus 135 ----~--~g~~---------------~~~~~~~~~~~~L~~~a~~~~GV~i~~~~~V~~Ll~~~~~~~g~~rV-~GVvv~ 192 (326)
T 2gjc_A 135 ----D--EGDY---------------VVVKHAALFISTVLSKVLQLPNVKLFNATCVEDLVTRPPTEKGEVTV-AGVVTN 192 (326)
T ss_dssp ----E--CSSE---------------EEESCHHHHHHHHHHHHHTSTTEEEETTEEEEEEEECCCC-----CE-EEEEEE
T ss_pred ----c--CCCe---------------EEEcchHHHHHHHHHHHHHhcCcEEEecceeeeeeecccccCCCcEE-EEEEec
Confidence 0 0000 01113345566665543 47899999999999876321 2 22 33332
Q ss_pred -----C--------CCcEEEc---------------cEEEecCCCchhhhhhh
Q 044609 148 -----G--------DSTIIKA---------------KVLIGCDGVHSMVAQWL 172 (232)
Q Consensus 148 -----~--------~g~~~~a---------------~~vV~A~G~~S~~r~~~ 172 (232)
. ++.++.| ++||+|+|+.|.+.+.+
T Consensus 193 ~~~v~~~g~~~~~~d~~~I~A~G~~~~~~~~~~~~~~~VV~ATG~~~~~~~~~ 245 (326)
T 2gjc_A 193 WTLVTQAHGTQCCMDPNVIELAGYKNDGTRDLSQKHGVILSTTGHDGPFGAFC 245 (326)
T ss_dssp EHHHHTC---CCCCCCEEEEESCCCSSSCCCSSTTCCEEEECCCCC--CCSHH
T ss_pred ceeecccccceeccCceEEEEeeccccccccccccCCEEEECcCCCchHHHHH
Confidence 1 3357999 99999999998765544
No 74
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=99.51 E-value=5.2e-14 Score=109.75 Aligned_cols=115 Identities=23% Similarity=0.301 Sum_probs=82.8
Q ss_pred cccEEEECCCHHHHHHHHHHHhCCCcEEEEecCCCCcCcceeeeecccHHHHHHHcCChHHHHhhccCceeeEEEEcCCC
Q 044609 5 EEDVVIIGAGIAGLATAVALRRLGIKALVLEKSDGLRATGAALTLSPNAWLALDALGVSHKLTSVYAPAKRVFVTNLGTG 84 (232)
Q Consensus 5 ~~dV~IvG~G~~G~~~A~~L~~~g~~v~viE~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~ 84 (232)
.+||+|||||++|+++|..|+++|++|+|||+.+.++... .. ..+.. .
T Consensus 7 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gG~~-------------~~----------~~~~~--~------- 54 (332)
T 3lzw_A 7 VYDITIIGGGPVGLFTAFYGGMRQASVKIIESLPQLGGQL-------------SA----------LYPEK--Y------- 54 (332)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHH-------------HH----------HCTTS--E-------
T ss_pred cceEEEECCCHHHHHHHHHHHHCCCCEEEEEcCCCCCcee-------------hh----------cCCCc--e-------
Confidence 4899999999999999999999999999999987653110 00 00000 0
Q ss_pred ceeEEeccCCCCCCCCceeeeehHHHHHHHhhhCC--CCeEEeCceEEEEEecCCCCCccEEEEeCCCcEEEccEEEecC
Q 044609 85 ATQELSYAGKSGRIGSGLRSVHRQSLLEALADELP--DDTIQFSSKIAAIDSQTLNGSSAAIINLGDSTIIKAKVLIGCD 162 (232)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~--~~~i~~~~~v~~i~~~~~~g~~~~~v~~~~g~~~~a~~vV~A~ 162 (232)
..++.. ...+.+..+.+.+.+.+. +++++++++|+++...+ +.. +.|.+.+|+ +.+|.||+|+
T Consensus 55 ---~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~--~~~-~~v~~~~g~-~~~d~vVlAt 119 (332)
T 3lzw_A 55 ---IYDVAG--------FPKIRAQELINNLKEQMAKFDQTICLEQAVESVEKQA--DGV-FKLVTNEET-HYSKTVIITA 119 (332)
T ss_dssp ---ECCSTT--------CSSEEHHHHHHHHHHHHTTSCCEEECSCCEEEEEECT--TSC-EEEEESSEE-EEEEEEEECC
T ss_pred ---EeccCC--------CCCCCHHHHHHHHHHHHHHhCCcEEccCEEEEEEECC--CCc-EEEEECCCE-EEeCEEEECC
Confidence 001110 112456777777777654 78999999999998875 324 888888887 9999999999
Q ss_pred CCch
Q 044609 163 GVHS 166 (232)
Q Consensus 163 G~~S 166 (232)
|..+
T Consensus 120 G~~~ 123 (332)
T 3lzw_A 120 GNGA 123 (332)
T ss_dssp TTSC
T ss_pred CCCc
Confidence 9954
No 75
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=99.51 E-value=9.5e-14 Score=106.61 Aligned_cols=110 Identities=17% Similarity=0.241 Sum_probs=77.9
Q ss_pred cccEEEECCCHHHHHHHHHHHhCCCcEEEEecCCCCcCcceeeeecccHHHHHHHcCChHHHHhhccCceeeEEEEcCCC
Q 044609 5 EEDVVIIGAGIAGLATAVALRRLGIKALVLEKSDGLRATGAALTLSPNAWLALDALGVSHKLTSVYAPAKRVFVTNLGTG 84 (232)
Q Consensus 5 ~~dV~IvG~G~~G~~~A~~L~~~g~~v~viE~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~ 84 (232)
.+||+|||||++|+++|..|+++|++|+|||+.+..... + .
T Consensus 2 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~~~~----------------------------~----------~- 42 (297)
T 3fbs_A 2 KFDVIIIGGSYAGLSAALQLGRARKNILLVDAGERRNRF----------------------------A----------S- 42 (297)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCCGGGG----------------------------C----------S-
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCccccc----------------------------c----------h-
Confidence 389999999999999999999999999999986522100 0 0
Q ss_pred ceeEEeccCCCCCCCCceeeeehHHHHHHHhhhCC---CCeEEeCceEEEEEecCCCCCccEEEEeCCCcEEEccEEEec
Q 044609 85 ATQELSYAGKSGRIGSGLRSVHRQSLLEALADELP---DDTIQFSSKIAAIDSQTLNGSSAAIINLGDSTIIKAKVLIGC 161 (232)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~---~~~i~~~~~v~~i~~~~~~g~~~~~v~~~~g~~~~a~~vV~A 161 (232)
....+. .........+.+.+.+.+. +++++ ..+|+++..++ .. +.|.+.+++++.+|.||+|
T Consensus 43 --~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~v~~~-~~~v~~i~~~~---~~-~~v~~~~g~~~~~d~vviA 107 (297)
T 3fbs_A 43 --HSHGFL--------GQDGKAPGEIIAEARRQIERYPTIHWV-EGRVTDAKGSF---GE-FIVEIDGGRRETAGRLILA 107 (297)
T ss_dssp --CCCSST--------TCTTCCHHHHHHHHHHHHTTCTTEEEE-ESCEEEEEEET---TE-EEEEETTSCEEEEEEEEEC
T ss_pred --hhcCCc--------CCCCCCHHHHHHHHHHHHHhcCCeEEE-EeEEEEEEEcC---Ce-EEEEECCCCEEEcCEEEEC
Confidence 000011 0112445666666666553 45554 45899998764 34 8888999999999999999
Q ss_pred CCCchhh
Q 044609 162 DGVHSMV 168 (232)
Q Consensus 162 ~G~~S~~ 168 (232)
+|..+..
T Consensus 108 tG~~~~~ 114 (297)
T 3fbs_A 108 MGVTDEL 114 (297)
T ss_dssp CCCEEEC
T ss_pred CCCCCCC
Confidence 9997654
No 76
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=99.51 E-value=1.8e-13 Score=106.24 Aligned_cols=111 Identities=20% Similarity=0.277 Sum_probs=79.1
Q ss_pred ccccEEEECCCHHHHHHHHHHHhCCCcEEEEecCCCCcCcceeeeecccHHHHHHHcCChHHHHhhccCceeeEEEEcCC
Q 044609 4 VEEDVVIIGAGIAGLATAVALRRLGIKALVLEKSDGLRATGAALTLSPNAWLALDALGVSHKLTSVYAPAKRVFVTNLGT 83 (232)
Q Consensus 4 ~~~dV~IvG~G~~G~~~A~~L~~~g~~v~viE~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~ 83 (232)
+.+||+|||||++|+++|+.|+++|++|+|||+. ++... .. .
T Consensus 14 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~--~gg~~---~~---------------------------------~ 55 (323)
T 3f8d_A 14 EKFDVIIVGLGPAAYGAALYSARYMLKTLVIGET--PGGQL---TE---------------------------------A 55 (323)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS--TTGGG---GG---------------------------------C
T ss_pred CccCEEEECccHHHHHHHHHHHHCCCcEEEEecc--CCCee---cc---------------------------------c
Confidence 3589999999999999999999999999999997 21110 00 0
Q ss_pred CceeEEeccCCCCCCCCceeeeehHHHHHHHhhhCC--CCeEEeCceEEEEEecCCCCCccEEEEeCCCcEEEccEEEec
Q 044609 84 GATQELSYAGKSGRIGSGLRSVHRQSLLEALADELP--DDTIQFSSKIAAIDSQTLNGSSAAIINLGDSTIIKAKVLIGC 161 (232)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~--~~~i~~~~~v~~i~~~~~~g~~~~~v~~~~g~~~~a~~vV~A 161 (232)
. ....++. ........+.+.+.+.+. ++++++ ++|+++..++ .. +.+.+.++.++.+|.||+|
T Consensus 56 ~--~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~v~~~~-~~v~~i~~~~---~~-~~v~~~~g~~~~~d~lvlA 120 (323)
T 3f8d_A 56 G--IVDDYLG--------LIEIQASDMIKVFNKHIEKYEVPVLL-DIVEKIENRG---DE-FVVKTKRKGEFKADSVILG 120 (323)
T ss_dssp C--EECCSTT--------STTEEHHHHHHHHHHHHHTTTCCEEE-SCEEEEEEC-----C-EEEEESSSCEEEEEEEEEC
T ss_pred c--cccccCC--------CCCCCHHHHHHHHHHHHHHcCCEEEE-EEEEEEEecC---CE-EEEEECCCCEEEcCEEEEC
Confidence 0 0001110 012456677777665543 788888 8999998764 33 7888888889999999999
Q ss_pred CCCchh
Q 044609 162 DGVHSM 167 (232)
Q Consensus 162 ~G~~S~ 167 (232)
+|....
T Consensus 121 tG~~~~ 126 (323)
T 3f8d_A 121 IGVKRR 126 (323)
T ss_dssp CCCEEC
T ss_pred cCCCCc
Confidence 998854
No 77
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=99.51 E-value=1e-13 Score=108.41 Aligned_cols=118 Identities=17% Similarity=0.243 Sum_probs=79.9
Q ss_pred ccccEEEECCCHHHHHHHHHHHhCCCcEEEEecCCCCcCcceeeeecccHHHHHHHcCChHHHHhhccCceeeEEEEcCC
Q 044609 4 VEEDVVIIGAGIAGLATAVALRRLGIKALVLEKSDGLRATGAALTLSPNAWLALDALGVSHKLTSVYAPAKRVFVTNLGT 83 (232)
Q Consensus 4 ~~~dV~IvG~G~~G~~~A~~L~~~g~~v~viE~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~ 83 (232)
+.+||+|||||++|+++|..|+++|++|+|||+.+.......+ .+.. . .
T Consensus 21 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~vie~~~~~~~~~gg---------------~~~~---~-~------------ 69 (338)
T 3itj_A 21 VHNKVTIIGSGPAAHTAAIYLARAEIKPILYEGMMANGIAAGG---------------QLTT---T-T------------ 69 (338)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSBTTBCTTC---------------GGGG---S-S------------
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEecCCCCCCCcCc---------------cccc---c-h------------
Confidence 4589999999999999999999999999999997621111000 0000 0 0
Q ss_pred CceeEEeccCCCCCCCCceeeeehHHHHHHHhhhCC--CCeEEeCceEEEEEecCCCCCccEEEEeC---CCcEEEccEE
Q 044609 84 GATQELSYAGKSGRIGSGLRSVHRQSLLEALADELP--DDTIQFSSKIAAIDSQTLNGSSAAIINLG---DSTIIKAKVL 158 (232)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~--~~~i~~~~~v~~i~~~~~~g~~~~~v~~~---~g~~~~a~~v 158 (232)
....++.. ...+.+..+.+.+.+.+. ++++++++ |+++..+. .. +.+.+. ++.++.+|.|
T Consensus 70 ---~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~gv~i~~~~-v~~i~~~~---~~-~~v~~~~~~~~~~~~~d~v 134 (338)
T 3itj_A 70 ---EIENFPGF-------PDGLTGSELMDRMREQSTKFGTEIITET-VSKVDLSS---KP-FKLWTEFNEDAEPVTTDAI 134 (338)
T ss_dssp ---EECCSTTC-------TTCEEHHHHHHHHHHHHHHTTCEEECSC-EEEEECSS---SS-EEEEETTCSSSCCEEEEEE
T ss_pred ---hhcccCCC-------cccCCHHHHHHHHHHHHHHcCCEEEEeE-EEEEEEcC---CE-EEEEEEecCCCcEEEeCEE
Confidence 00011110 113556777777766553 78999988 99998764 44 777763 6678999999
Q ss_pred EecCCCchh
Q 044609 159 IGCDGVHSM 167 (232)
Q Consensus 159 V~A~G~~S~ 167 (232)
|+|+|..+.
T Consensus 135 vlAtG~~~~ 143 (338)
T 3itj_A 135 ILATGASAK 143 (338)
T ss_dssp EECCCEEEC
T ss_pred EECcCCCcC
Confidence 999998764
No 78
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=99.50 E-value=2.5e-13 Score=113.84 Aligned_cols=161 Identities=17% Similarity=0.133 Sum_probs=90.2
Q ss_pred CCcccccEEEECCCHHHHHHHHHHHhCC--CcEEEEecCCCCcCc----ceeee--ecc-cHH-----HHHHHc-CCh--
Q 044609 1 MEMVEEDVVIIGAGIAGLATAVALRRLG--IKALVLEKSDGLRAT----GAALT--LSP-NAW-----LALDAL-GVS-- 63 (232)
Q Consensus 1 m~~~~~dV~IvG~G~~G~~~A~~L~~~g--~~v~viE~~~~~~~~----~~~~~--~~~-~~~-----~~l~~~-g~~-- 63 (232)
|++.++||+|||||++|+++|+.|++.| .+|+||||.+..... ..++. +.. ..+ ..++.- ++.
T Consensus 1 m~~~~~DVvIVG~G~AGl~aAl~la~~G~~~~V~vlEk~~~~~~~s~~a~GGi~~~~~~~ds~~~~~~d~~~~g~~~~d~ 80 (602)
T 1kf6_A 1 MQTFQADLAIVGAGGAGLRAAIAAAQANPNAKIALISKVYPMRSHTVAAEGGSAAVAQDHDSFEYHFHDTVAGGDWLCEQ 80 (602)
T ss_dssp CEEEECSEEEECCSHHHHHHHHHHHHHCTTCCEEEEESSCGGGSGGGGCCSCEECCCSTTCCHHHHHHHHHHHTTTCSCH
T ss_pred CCcccCCEEEECCCHHHHHHHHHHHhcCCCCcEEEEeCCCCCCChHHHhcCccEEeCCCCCCHHHHHHHHHHhcCCCCCH
Confidence 6677899999999999999999999999 999999998654221 11221 110 111 111110 000
Q ss_pred --------------HHHHhhccCceeeEEEEcCCCceeEEeccCCCCCCCCceee---eehHHHHHHHhhhCC--C-CeE
Q 044609 64 --------------HKLTSVYAPAKRVFVTNLGTGATQELSYAGKSGRIGSGLRS---VHRQSLLEALADELP--D-DTI 123 (232)
Q Consensus 64 --------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~l~~~l~~~~~--~-~~i 123 (232)
+.+...+.++. ....+......+ .+........ .....+.+.|.+.+. + +++
T Consensus 81 ~~v~~~~~~~~~~i~~L~~~Gv~f~-----~~~~g~~~~~~~---gg~~~~r~~~~~d~tg~~l~~~L~~~~~~~gnv~i 152 (602)
T 1kf6_A 81 DVVDYFVHHCPTEMTQLELWGCPWS-----RRPDGSVNVRRF---GGMKIERTWFAADKTGFHMLHTLFQTSLQFPQIQR 152 (602)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCCCC-----BCTTSSBCCBCC---TTCSSCCEECSTTCHHHHHHHHHHHHHTTCTTEEE
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCcc-----cCCCCccccccc---CCccCCeEEEcCCCCHHHHHHHHHHHHHhCCCcEE
Confidence 01111111111 001111100000 0100000000 113467777776653 5 899
Q ss_pred EeCceEEEEEecCCCCCccEEEE---eCCCc--EEEccEEEecCCCchhhhhhh
Q 044609 124 QFSSKIAAIDSQTLNGSSAAIIN---LGDST--IIKAKVLIGCDGVHSMVAQWL 172 (232)
Q Consensus 124 ~~~~~v~~i~~~~~~g~~~~~v~---~~~g~--~~~a~~vV~A~G~~S~~r~~~ 172 (232)
++++.|+++..++ +.. ..|. +.+|+ ++.|+.||+|+|.+|.++...
T Consensus 153 ~~~~~v~~l~~~~--g~v-~Gv~~~~~~~G~~~~i~A~~VVlAtGg~s~~~~~~ 203 (602)
T 1kf6_A 153 FDEHFVLDILVDD--GHV-RGLVAMNMMEGTLVQIRANAVVMATGGAGRVYRYN 203 (602)
T ss_dssp EETEEEEEEEEET--TEE-EEEEEEETTTTEEEEEECSCEEECCCCCGGGSSSB
T ss_pred EeCCEEEEEEEeC--CEE-EEEEEEEcCCCcEEEEEcCeEEECCCCCcccccCc
Confidence 9999999998764 432 3332 35676 789999999999999876544
No 79
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=99.49 E-value=2.2e-13 Score=105.40 Aligned_cols=112 Identities=21% Similarity=0.262 Sum_probs=78.2
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCC-cEEEEecCCCCcCcceeeeecccHHHHHHHcCChHHHHhhccCceeeEEEEcCCC
Q 044609 6 EDVVIIGAGIAGLATAVALRRLGI-KALVLEKSDGLRATGAALTLSPNAWLALDALGVSHKLTSVYAPAKRVFVTNLGTG 84 (232)
Q Consensus 6 ~dV~IvG~G~~G~~~A~~L~~~g~-~v~viE~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~ 84 (232)
+||+|||||++|+++|..|++.|+ +|+|||+.. ++.. .... ..
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~~g~~~v~lie~~~-~gg~----~~~~-------------------~~------------ 45 (311)
T 2q0l_A 2 IDCAIIGGGPAGLSAGLYATRGGVKNAVLFEKGM-PGGQ----ITGS-------------------SE------------ 45 (311)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCSSEEEECSSS-TTCG----GGGC-------------------SC------------
T ss_pred ceEEEECccHHHHHHHHHHHHCCCCcEEEEcCCC-CCcc----cccc-------------------cc------------
Confidence 699999999999999999999999 999999952 2110 0000 00
Q ss_pred ceeEEeccCCCCCCCCceeeeehHHHHHHHhhhCC--CCeEEeCceEEEEEecCCCCCccEEEEeCCCcEEEccEEEecC
Q 044609 85 ATQELSYAGKSGRIGSGLRSVHRQSLLEALADELP--DDTIQFSSKIAAIDSQTLNGSSAAIINLGDSTIIKAKVLIGCD 162 (232)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~--~~~i~~~~~v~~i~~~~~~g~~~~~v~~~~g~~~~a~~vV~A~ 162 (232)
. ..++. ....+.+..+.+.+.+.+. +++++. ++|+++..++ .. +.+.+.+|+++.+|.||+|+
T Consensus 46 -~--~~~~~-------~~~~~~~~~~~~~l~~~~~~~~v~~~~-~~v~~i~~~~---~~-~~v~~~~g~~~~~~~vv~At 110 (311)
T 2q0l_A 46 -I--ENYPG-------VKEVVSGLDFMQPWQEQCFRFGLKHEM-TAVQRVSKKD---SH-FVILAEDGKTFEAKSVIIAT 110 (311)
T ss_dssp -B--CCSTT-------CCSCBCHHHHHHHHHHHHHTTSCEEEC-SCEEEEEEET---TE-EEEEETTSCEEEEEEEEECC
T ss_pred -c--ccCCC-------CcccCCHHHHHHHHHHHHHHcCCEEEE-EEEEEEEEcC---CE-EEEEEcCCCEEECCEEEECC
Confidence 0 00000 0113456667776665443 688887 7899998764 34 77878888899999999999
Q ss_pred CCchhh
Q 044609 163 GVHSMV 168 (232)
Q Consensus 163 G~~S~~ 168 (232)
|.++..
T Consensus 111 G~~~~~ 116 (311)
T 2q0l_A 111 GGSPKR 116 (311)
T ss_dssp CEEECC
T ss_pred CCCCCC
Confidence 987754
No 80
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=99.48 E-value=5.5e-13 Score=104.60 Aligned_cols=143 Identities=15% Similarity=0.144 Sum_probs=81.1
Q ss_pred ccEEEECCCHHHHHHHHHHHh---CCCcEEEEecCCCCcCcceee----------e-------ecccHHHHHHHcCChHH
Q 044609 6 EDVVIIGAGIAGLATAVALRR---LGIKALVLEKSDGLRATGAAL----------T-------LSPNAWLALDALGVSHK 65 (232)
Q Consensus 6 ~dV~IvG~G~~G~~~A~~L~~---~g~~v~viE~~~~~~~~~~~~----------~-------~~~~~~~~l~~~g~~~~ 65 (232)
+||+|||||++|+++|+.|++ .|++|+||||.+..+...... . ..+.....+..+ .+.
T Consensus 2 ~dV~IIGaG~aGl~~A~~L~~~~~~G~~V~v~Ek~~~~gg~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~--~~~ 79 (342)
T 3qj4_A 2 AQVLIVGAGMTGSLCAALLRRQTSGPLYLAVWDKADDSGGRMTTACSPHNPQCTADLGAQYITCTPHYAKKHQRF--YDE 79 (342)
T ss_dssp EEEEEECCSHHHHHHHHHHHSCC-CCEEEEEECSSSSSCGGGCEEECSSCTTCEEESSCCCEEECSSHHHHTHHH--HHH
T ss_pred CcEEEECCcHHHHHHHHHHHhhccCCceEEEEECCCCCccceeeeecCCCCCceEecCCceEEcCchHHHHHHHH--HHH
Confidence 489999999999999999999 999999999987653211110 0 011111011100 111
Q ss_pred HHhhccCceeeEEEEcCCCceeEEeccCCCCCCCCceeeeehHHHHHHHhhhCCCCeEEeCceEEEEEecCCCCCccEEE
Q 044609 66 LTSVYAPAKRVFVTNLGTGATQELSYAGKSGRIGSGLRSVHRQSLLEALADELPDDTIQFSSKIAAIDSQTLNGSSAAII 145 (232)
Q Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~i~~~~~v~~i~~~~~~g~~~~~v 145 (232)
+..... ... + ............... ....-....+.+.|.+.+ +++++++++|+++..++ +. +.|
T Consensus 80 ~~~~g~-~~~----~-~~~~~~~~~~~~~~~----~~~~~g~~~l~~~l~~~~-g~~i~~~~~V~~i~~~~---~~-~~v 144 (342)
T 3qj4_A 80 LLAYGV-LRP----L-SSPIEGMVMKEGDCN----FVAPQGISSIIKHYLKES-GAEVYFRHRVTQINLRD---DK-WEV 144 (342)
T ss_dssp HHHTTS-CEE----C-CSCEETCCC--CCEE----EECTTCTTHHHHHHHHHH-TCEEESSCCEEEEEECS---SS-EEE
T ss_pred HHhCCC-eec----C-chhhcceeccCCccc----eecCCCHHHHHHHHHHhc-CCEEEeCCEEEEEEEcC---CE-EEE
Confidence 111111 000 0 000000000000000 000011245666666655 78999999999999864 44 888
Q ss_pred EeCCCcEEEccEEEecCCCc
Q 044609 146 NLGDSTIIKAKVLIGCDGVH 165 (232)
Q Consensus 146 ~~~~g~~~~a~~vV~A~G~~ 165 (232)
.+.+|+++.||.||+|+...
T Consensus 145 ~~~~g~~~~ad~vV~A~p~~ 164 (342)
T 3qj4_A 145 SKQTGSPEQFDLIVLTMPVP 164 (342)
T ss_dssp EESSSCCEEESEEEECSCHH
T ss_pred EECCCCEEEcCEEEECCCHH
Confidence 89888888999999999753
No 81
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=99.46 E-value=3.6e-13 Score=104.56 Aligned_cols=115 Identities=21% Similarity=0.332 Sum_probs=76.4
Q ss_pred CCcccccEEEECCCHHHHHHHHHHHhCCCcEEEEecCCCCcCcceeeeecccHHHHHHHcCChHHHHhhccCceeeEEEE
Q 044609 1 MEMVEEDVVIIGAGIAGLATAVALRRLGIKALVLEKSDGLRATGAALTLSPNAWLALDALGVSHKLTSVYAPAKRVFVTN 80 (232)
Q Consensus 1 m~~~~~dV~IvG~G~~G~~~A~~L~~~g~~v~viE~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~ 80 (232)
|.|+.+||+|||||++|+++|..|++.|++|+|||+.. ++ + .+.. . ...
T Consensus 1 ~~~~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~-~g--g-~~~~-------------------~-~~~------- 49 (320)
T 1trb_A 1 GTTKHSKLLILGSGPAGYTAAVYAARANLQPVLITGME-KG--G-QLTT-------------------T-TEV------- 49 (320)
T ss_dssp CCEEEEEEEEECCSHHHHHHHHHHHTTTCCCEEECCSS-TT--G-GGGG-------------------C-SBC-------
T ss_pred CCCCcCCEEEECcCHHHHHHHHHHHHCCCcEEEEccCC-CC--c-eEec-------------------c-hhh-------
Confidence 34567999999999999999999999999999999652 21 1 0000 0 000
Q ss_pred cCCCceeEEeccCCCCCCCCceeeeehHHHHHHHhhhCC--CCeEEeCceEEEEEecCCCCCccEEEEeCCCcEEEccEE
Q 044609 81 LGTGATQELSYAGKSGRIGSGLRSVHRQSLLEALADELP--DDTIQFSSKIAAIDSQTLNGSSAAIINLGDSTIIKAKVL 158 (232)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~--~~~i~~~~~v~~i~~~~~~g~~~~~v~~~~g~~~~a~~v 158 (232)
. .++.. ...+.+..+.+.+.+.+. +++++.++ |+++..++ .. +.+ +.++.++.+|.|
T Consensus 50 --~------~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~-v~~i~~~~---~~-~~v-~~~~~~~~~~~l 108 (320)
T 1trb_A 50 --E------NWPGD-------PNDLTGPLLMERMHEHATKFETEIIFDH-INKVDLQN---RP-FRL-NGDNGEYTCDAL 108 (320)
T ss_dssp --C------CSTTC-------CSSCBHHHHHHHHHHHHHHTTCEEECCC-EEEEECSS---SS-EEE-EESSCEEEEEEE
T ss_pred --h------hCCCC-------CCCCCHHHHHHHHHHHHHHCCCEEEEee-eeEEEecC---CE-EEE-EeCCCEEEcCEE
Confidence 0 00000 012345556665554442 78888886 88887653 33 666 667888999999
Q ss_pred EecCCCchh
Q 044609 159 IGCDGVHSM 167 (232)
Q Consensus 159 V~A~G~~S~ 167 (232)
|+|+|..+.
T Consensus 109 v~AtG~~~~ 117 (320)
T 1trb_A 109 IIATGASAR 117 (320)
T ss_dssp EECCCEEEC
T ss_pred EECCCCCcC
Confidence 999998764
No 82
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=99.46 E-value=2.8e-13 Score=114.38 Aligned_cols=40 Identities=35% Similarity=0.503 Sum_probs=36.9
Q ss_pred CCcccccEEEECCCHHHHHHHHHHHhCCCcEEEEecCCCC
Q 044609 1 MEMVEEDVVIIGAGIAGLATAVALRRLGIKALVLEKSDGL 40 (232)
Q Consensus 1 m~~~~~dV~IvG~G~~G~~~A~~L~~~g~~v~viE~~~~~ 40 (232)
|.+.++||+|||||++|+++|+.|++.|.+|+||||.+..
T Consensus 1 M~~~~~DVvVIGgG~AGL~AAl~aae~G~~V~vlEK~~~~ 40 (660)
T 2bs2_A 1 MKVQYCDSLVIGGGLAGLRAAVATQQKGLSTIVLSLIPVK 40 (660)
T ss_dssp CCEEECSEEEECCSHHHHHHHHHHHTTTCCEEEECSSCGG
T ss_pred CCcccccEEEECchHHHHHHHHHHHHCCCcEEEEeccCCC
Confidence 6667799999999999999999999999999999998754
No 83
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=99.46 E-value=4.3e-13 Score=106.04 Aligned_cols=38 Identities=29% Similarity=0.512 Sum_probs=34.5
Q ss_pred cccccEEEECCCHHHHHHHHHHHhCCCcEEEEecCCCC
Q 044609 3 MVEEDVVIIGAGIAGLATAVALRRLGIKALVLEKSDGL 40 (232)
Q Consensus 3 ~~~~dV~IvG~G~~G~~~A~~L~~~g~~v~viE~~~~~ 40 (232)
++++||+|||||++|+++|+.|+++|++|+|||+....
T Consensus 4 ~~~~dVvVIG~Gi~Gls~A~~La~~G~~V~vle~~~~~ 41 (363)
T 1c0p_A 4 HSQKRVVVLGSGVIGLSSALILARKGYSVHILARDLPE 41 (363)
T ss_dssp CCSCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSCTT
T ss_pred CCCCCEEEECCCHHHHHHHHHHHhCCCEEEEEeccCCC
Confidence 35689999999999999999999999999999997643
No 84
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=99.46 E-value=6.4e-13 Score=103.47 Aligned_cols=114 Identities=21% Similarity=0.293 Sum_probs=76.8
Q ss_pred ccccEEEECCCHHHHHHHHHHHhCCCcEEEEecCCCCcCcceeeeecccHHHHHHHcCChHHHHhhccCceeeEEEEcCC
Q 044609 4 VEEDVVIIGAGIAGLATAVALRRLGIKALVLEKSDGLRATGAALTLSPNAWLALDALGVSHKLTSVYAPAKRVFVTNLGT 83 (232)
Q Consensus 4 ~~~dV~IvG~G~~G~~~A~~L~~~g~~v~viE~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~ 83 (232)
+.+||+|||||++|+++|..|++.|++|+|||+. .++... ... ..
T Consensus 7 ~~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~-~~gg~~---~~~--------------------~~----------- 51 (325)
T 2q7v_A 7 HDYDVVIIGGGPAGLTAAIYTGRAQLSTLILEKG-MPGGQI---AWS--------------------EE----------- 51 (325)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CTTGGG---GGC--------------------SC-----------
T ss_pred ccCCEEEECCCHHHHHHHHHHHHcCCcEEEEeCC-CCCccc---ccc--------------------cc-----------
Confidence 3589999999999999999999999999999998 331110 000 00
Q ss_pred CceeEEeccCCCCCCCCceeeeehHHHHHHHhhhCC--CCeEEeCceEEEEEec--CCCCCccEEEEeCCCcEEEccEEE
Q 044609 84 GATQELSYAGKSGRIGSGLRSVHRQSLLEALADELP--DDTIQFSSKIAAIDSQ--TLNGSSAAIINLGDSTIIKAKVLI 159 (232)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~--~~~i~~~~~v~~i~~~--~~~g~~~~~v~~~~g~~~~a~~vV 159 (232)
. ..++.. + ..+.+..+.+.+.+.+. +++++. .+|.++..+ + +.. +.|.+.+|+++.+|.||
T Consensus 52 --~--~~~~~~----~---~~~~~~~~~~~l~~~~~~~gv~~~~-~~v~~i~~~~~~--~~~-~~v~~~~g~~~~~~~vv 116 (325)
T 2q7v_A 52 --V--ENFPGF----P---EPIAGMELAQRMHQQAEKFGAKVEM-DEVQGVQHDATS--HPY-PFTVRGYNGEYRAKAVI 116 (325)
T ss_dssp --B--CCSTTC----S---SCBCHHHHHHHHHHHHHHTTCEEEE-CCEEEEEECTTS--SSC-CEEEEESSCEEEEEEEE
T ss_pred --c--ccCCCC----C---CCCCHHHHHHHHHHHHHHcCCEEEe-eeEEEEEeccCC--Cce-EEEEECCCCEEEeCEEE
Confidence 0 000000 0 12345566666655443 788887 589999876 3 222 55667788889999999
Q ss_pred ecCCCchh
Q 044609 160 GCDGVHSM 167 (232)
Q Consensus 160 ~A~G~~S~ 167 (232)
+|+|..+.
T Consensus 117 ~AtG~~~~ 124 (325)
T 2q7v_A 117 LATGADPR 124 (325)
T ss_dssp ECCCEEEC
T ss_pred ECcCCCcC
Confidence 99998764
No 85
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=99.46 E-value=2.3e-13 Score=112.13 Aligned_cols=62 Identities=8% Similarity=0.216 Sum_probs=42.1
Q ss_pred HHHHHHhhhCC--CCeEEeCceEEEEEecCCCCCccEEEEeCCCcEEEccEEEecCCCchhhhhhhc
Q 044609 109 SLLEALADELP--DDTIQFSSKIAAIDSQTLNGSSAAIINLGDSTIIKAKVLIGCDGVHSMVAQWLG 173 (232)
Q Consensus 109 ~l~~~l~~~~~--~~~i~~~~~v~~i~~~~~~g~~~~~v~~~~g~~~~a~~vV~A~G~~S~~r~~~~ 173 (232)
.+.+.|.+.++ |++|+++++|++|..++ +.. ..|++.||+++.||.||.+.+.+...+++++
T Consensus 222 ~l~~aL~~~~~~~Gg~I~~~~~V~~I~~~~--~~~-~gV~~~~g~~~~ad~VV~~a~~~~~~~~Ll~ 285 (501)
T 4dgk_A 222 ALVQGMIKLFQDLGGEVVLNARVSHMETTG--NKI-EAVHLEDGRRFLTQAVASNADVVHTYRDLLS 285 (501)
T ss_dssp HHHHHHHHHHHHTTCEEECSCCEEEEEEET--TEE-EEEEETTSCEEECSCEEECCC----------
T ss_pred chHHHHHHHHHHhCCceeeecceeEEEeeC--CeE-EEEEecCCcEEEcCEEEECCCHHHHHHHhcc
Confidence 45555555443 78999999999999875 454 6799999999999999998888877666664
No 86
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=99.46 E-value=1.8e-13 Score=111.60 Aligned_cols=146 Identities=16% Similarity=0.249 Sum_probs=83.1
Q ss_pred ccEEEECCCHHHHHHHHHHHh---CCCc---EEEEecCCCCcCcceeeeecc-cHHHHHHHcCChHHHHhhccCceeeEE
Q 044609 6 EDVVIIGAGIAGLATAVALRR---LGIK---ALVLEKSDGLRATGAALTLSP-NAWLALDALGVSHKLTSVYAPAKRVFV 78 (232)
Q Consensus 6 ~dV~IvG~G~~G~~~A~~L~~---~g~~---v~viE~~~~~~~~~~~~~~~~-~~~~~l~~~g~~~~~~~~~~~~~~~~~ 78 (232)
+||+|||||++|+++|..|++ .|++ |+|||+.+.++.... ... .+ ...+|+.. ..........
T Consensus 3 ~~V~IIGaG~aGl~aA~~L~~~~~~G~~~~~V~v~E~~~~~GG~w~---~~~~~g---~~~~g~~~----~~~~y~~l~~ 72 (464)
T 2xve_A 3 TRIAILGAGPSGMAQLRAFQSAQEKGAEIPELVCFEKQADWGGQWN---YTWRTG---LDENGEPV----HSSMYRYLWS 72 (464)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHHTTCCCCEEEEECSSSSSCGGGS---CCSCCS---BCTTSSBC----CCCCCTTCBC
T ss_pred CcEEEECccHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCCEee---cCCCCC---ccccCCCC----cCccccchhh
Confidence 699999999999999999999 9999 999999876532110 000 00 00001000 0000000000
Q ss_pred EEcCCCce---eEEeccCCCCCCCCceeeeehHHHHHHHhhhCC--CCe--EEeCceEEEEEecCCCCCccEEEEeCC--
Q 044609 79 TNLGTGAT---QELSYAGKSGRIGSGLRSVHRQSLLEALADELP--DDT--IQFSSKIAAIDSQTLNGSSAAIINLGD-- 149 (232)
Q Consensus 79 ~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~--~~~--i~~~~~v~~i~~~~~~g~~~~~v~~~~-- 149 (232)
. ..... ..++++...+ ......+.+..+.+.|.+.+. +++ ++++++|+++...++ +.. +.|++.+
T Consensus 73 -~-~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~~l~~~~~~~gv~~~i~~~~~V~~v~~~~~-~~~-~~V~~~~~~ 146 (464)
T 2xve_A 73 -N-GPKECLEFADYTFDEHFG--KPIASYPPREVLWDYIKGRVEKAGVRKYIRFNTAVRHVEFNED-SQT-FTVTVQDHT 146 (464)
T ss_dssp -S-SCGGGTCBTTBCHHHHHS--SCCCSSCBHHHHHHHHHHHHHHHTCGGGEECSEEEEEEEEETT-TTE-EEEEEEETT
T ss_pred -c-CChhhcccCCCCCCcccC--CCCCCCCCHHHHHHHHHHHHHHcCCcceEEeCCEEEEEEEcCC-CCc-EEEEEEEcC
Confidence 0 00000 0001100000 001224567888888876654 666 899999999987652 223 6676654
Q ss_pred -C--cEEEccEEEecCCCchh
Q 044609 150 -S--TIIKAKVLIGCDGVHSM 167 (232)
Q Consensus 150 -g--~~~~a~~vV~A~G~~S~ 167 (232)
| .++.+|.||+|+|.+|.
T Consensus 147 ~g~~~~~~~d~VVvAtG~~s~ 167 (464)
T 2xve_A 147 TDTIYSEEFDYVVCCTGHFST 167 (464)
T ss_dssp TTEEEEEEESEEEECCCSSSS
T ss_pred CCceEEEEcCEEEECCCCCCC
Confidence 4 47899999999998764
No 87
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=99.45 E-value=7.6e-13 Score=102.49 Aligned_cols=38 Identities=37% Similarity=0.595 Sum_probs=34.2
Q ss_pred CCcccccEEEECCCHHHHHHHHHHHhCCCcEEEEecCC
Q 044609 1 MEMVEEDVVIIGAGIAGLATAVALRRLGIKALVLEKSD 38 (232)
Q Consensus 1 m~~~~~dV~IvG~G~~G~~~A~~L~~~g~~v~viE~~~ 38 (232)
|+.++|||+||||||+|+++|..|++.|++|+|||+..
T Consensus 2 Mte~~yDvvIIG~GpAGl~aA~~l~~~g~~V~liE~~~ 39 (312)
T 4gcm_A 2 MTEIDFDIAIIGAGPAGMTAAVYASRANLKTVMIERGI 39 (312)
T ss_dssp --CCSEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred CCCCCCCEEEECCCHHHHHHHHHHHHCCCCEEEEecCC
Confidence 77788999999999999999999999999999999864
No 88
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=99.45 E-value=8.1e-13 Score=102.16 Aligned_cols=114 Identities=25% Similarity=0.317 Sum_probs=78.3
Q ss_pred cccEEEECCCHHHHHHHHHHHhCCCcEEEEecCCCCcCcceeeeecccHHHHHHHcCChHHHHhhccCceeeEEEEcCCC
Q 044609 5 EEDVVIIGAGIAGLATAVALRRLGIKALVLEKSDGLRATGAALTLSPNAWLALDALGVSHKLTSVYAPAKRVFVTNLGTG 84 (232)
Q Consensus 5 ~~dV~IvG~G~~G~~~A~~L~~~g~~v~viE~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~ 84 (232)
++||+|||||++|+++|..|++.|++|+|||+.. .+. .. . . . ..
T Consensus 1 ~~dvvIIG~G~aGl~aA~~l~~~g~~v~li~~~~----gG~--~~--------~----------~-~-----~~------ 44 (310)
T 1fl2_A 1 AYDVLIVGSGPAGAAAAIYSARKGIRTGLMGERF----GGQ--IL--------D----------T-V-----DI------ 44 (310)
T ss_dssp CEEEEEECCSHHHHHHHHHHHTTTCCEEEECSST----TGG--GG--------G----------C-C-----EE------
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCC----Cce--ec--------c----------c-c-----cc------
Confidence 3799999999999999999999999999998631 110 00 0 0 0 00
Q ss_pred ceeEEeccCCCCCCCCceeeeehHHHHHHHhhhCC--CCeEEeCceEEEEEecCCCCCccEEEEeCCCcEEEccEEEecC
Q 044609 85 ATQELSYAGKSGRIGSGLRSVHRQSLLEALADELP--DDTIQFSSKIAAIDSQTLNGSSAAIINLGDSTIIKAKVLIGCD 162 (232)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~--~~~i~~~~~v~~i~~~~~~g~~~~~v~~~~g~~~~a~~vV~A~ 162 (232)
..+. . .....+..+.+.+.+.+. +++++.+++|+.+..+.+.+.. +.|.+.+|+++.+|.||+|+
T Consensus 45 ----~~~~------~--~~~~~~~~~~~~~~~~~~~~~v~~~~~~~v~~i~~~~~~~~~-~~v~~~~g~~~~~~~lv~At 111 (310)
T 1fl2_A 45 ----ENYI------S--VPKTEGQKLAGALKVHVDEYDVDVIDSQSASKLIPAAVEGGL-HQIETASGAVLKARSIIVAT 111 (310)
T ss_dssp ----CCBT------T--BSSEEHHHHHHHHHHHHHTSCEEEECSCCEEEEECCSSTTCC-EEEEETTSCEEEEEEEEECC
T ss_pred ----cccc------C--cCCCCHHHHHHHHHHHHHHcCCeEEccCEEEEEEecccCCce-EEEEECCCCEEEeCEEEECc
Confidence 0000 0 012345566666655442 7899999999999765321224 78888889889999999999
Q ss_pred CCchh
Q 044609 163 GVHSM 167 (232)
Q Consensus 163 G~~S~ 167 (232)
|.++.
T Consensus 112 G~~~~ 116 (310)
T 1fl2_A 112 GAKWR 116 (310)
T ss_dssp CEEEC
T ss_pred CCCcC
Confidence 98764
No 89
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=99.45 E-value=4e-13 Score=106.38 Aligned_cols=135 Identities=19% Similarity=0.228 Sum_probs=79.4
Q ss_pred cccccEEEECCCHHHHHHHHHHHhCCC-cEEEEecCCCCcCcceeeeecccHHHHHHHcCChHHHHhhccCceeeEEEEc
Q 044609 3 MVEEDVVIIGAGIAGLATAVALRRLGI-KALVLEKSDGLRATGAALTLSPNAWLALDALGVSHKLTSVYAPAKRVFVTNL 81 (232)
Q Consensus 3 ~~~~dV~IvG~G~~G~~~A~~L~~~g~-~v~viE~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~ 81 (232)
|+++||+|||||++|+++|..|++.|+ +|+|||+.+ ++.. ...++.... + ..+. .
T Consensus 2 m~~~~vvIIGaG~aGl~aA~~l~~~g~~~v~lie~~~-~Gg~---~~~~~~~~~------~-------~~~~----~--- 57 (369)
T 3d1c_A 2 MQHHKVAIIGAGAAGIGMAITLKDFGITDVIILEKGT-VGHS---FKHWPKSTR------T-------ITPS----F--- 57 (369)
T ss_dssp CCEEEEEEECCSHHHHHHHHHHHHTTCCCEEEECSSS-TTHH---HHTSCTTCB------C-------SSCC----C---
T ss_pred CccCcEEEECcCHHHHHHHHHHHHcCCCcEEEEecCC-CCCc---cccCccccc------c-------cCcc----h---
Confidence 346899999999999999999999999 999999987 3210 000000000 0 0000 0
Q ss_pred CCCceeEEeccCCCCCC----CCceeeeehHHHHHHHhhhCC--CCeEEeCceEEEEEecCCCCCccEEEEeCCCcEEEc
Q 044609 82 GTGATQELSYAGKSGRI----GSGLRSVHRQSLLEALADELP--DDTIQFSSKIAAIDSQTLNGSSAAIINLGDSTIIKA 155 (232)
Q Consensus 82 ~~~~~~~~~~~~~~~~~----~~~~~~~~~~~l~~~l~~~~~--~~~i~~~~~v~~i~~~~~~g~~~~~v~~~~g~~~~a 155 (232)
.........+....... ......+.+..+.+.+.+.+. +++++++++|+++..++ .. +.|.+.++ ++.+
T Consensus 58 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~gv~i~~~~~v~~i~~~~---~~-~~v~~~~g-~~~~ 132 (369)
T 3d1c_A 58 TSNGFGMPDMNAISMDTSPAFTFNEEHISGETYAEYLQVVANHYELNIFENTVVTNISADD---AY-YTIATTTE-TYHA 132 (369)
T ss_dssp CCGGGTCCCTTCSSTTCCHHHHHCCSSCBHHHHHHHHHHHHHHTTCEEECSCCEEEEEECS---SS-EEEEESSC-CEEE
T ss_pred hcccCCchhhhhccccccccccccccCCCHHHHHHHHHHHHHHcCCeEEeCCEEEEEEECC---Ce-EEEEeCCC-EEEe
Confidence 00000000000000000 000113455566665554432 78999999999998764 33 77877777 5899
Q ss_pred cEEEecCCCch
Q 044609 156 KVLIGCDGVHS 166 (232)
Q Consensus 156 ~~vV~A~G~~S 166 (232)
|.||+|+|.++
T Consensus 133 d~vVlAtG~~~ 143 (369)
T 3d1c_A 133 DYIFVATGDYN 143 (369)
T ss_dssp EEEEECCCSTT
T ss_pred CEEEECCCCCC
Confidence 99999999976
No 90
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=99.44 E-value=3.9e-13 Score=111.48 Aligned_cols=37 Identities=38% Similarity=0.484 Sum_probs=34.0
Q ss_pred ccccEEEECCCHHHHHHHHHHHhCCCcEEEEecCCCCc
Q 044609 4 VEEDVVIIGAGIAGLATAVALRRLGIKALVLEKSDGLR 41 (232)
Q Consensus 4 ~~~dV~IvG~G~~G~~~A~~L~~~g~~v~viE~~~~~~ 41 (232)
.++||+|||||++|+++|+.|++ |.+|+||||.+..+
T Consensus 7 ~~~DVvVVG~G~AGl~aAl~la~-G~~V~vlEk~~~~~ 43 (540)
T 1chu_A 7 HSCDVLIIGSGAAGLSLALRLAD-QHQVIVLSKGPVTE 43 (540)
T ss_dssp EECSEEEECCSHHHHHHHHHHTT-TSCEEEECSSCTTC
T ss_pred CCCCEEEECccHHHHHHHHHHhc-CCcEEEEECCCCCC
Confidence 46899999999999999999999 99999999987653
No 91
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=99.44 E-value=9.8e-13 Score=102.14 Aligned_cols=111 Identities=25% Similarity=0.307 Sum_probs=74.1
Q ss_pred ccccEEEECCCHHHHHHHHHHHhCCCcEEEEecCCCCcCcceeeeecccHHHHHHHcCChHHHHhhccCceeeEEEEcCC
Q 044609 4 VEEDVVIIGAGIAGLATAVALRRLGIKALVLEKSDGLRATGAALTLSPNAWLALDALGVSHKLTSVYAPAKRVFVTNLGT 83 (232)
Q Consensus 4 ~~~dV~IvG~G~~G~~~A~~L~~~g~~v~viE~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~ 83 (232)
+++||+|||||++|+++|..|++.|++|+|||+.. ++ +. .... ...
T Consensus 15 ~~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~~-~g--g~-~~~~--------------------~~~---------- 60 (319)
T 3cty_A 15 RDFDVVIVGAGAAGFSAAVYAARSGFSVAILDKAV-AG--GL-TAEA--------------------PLV---------- 60 (319)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSS-TT--GG-GGGC--------------------SCB----------
T ss_pred CCCcEEEECcCHHHHHHHHHHHhCCCcEEEEeCCC-CC--cc-cccc--------------------chh----------
Confidence 35899999999999999999999999999999943 21 10 0000 000
Q ss_pred CceeEEeccCCCCCCCCceeeeehHHHHHHHhhhCC--CCeEEeCceEEEEEecCCCCCccEEEEeCCCcEEEccEEEec
Q 044609 84 GATQELSYAGKSGRIGSGLRSVHRQSLLEALADELP--DDTIQFSSKIAAIDSQTLNGSSAAIINLGDSTIIKAKVLIGC 161 (232)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~--~~~i~~~~~v~~i~~~~~~g~~~~~v~~~~g~~~~a~~vV~A 161 (232)
..++ .. ..+.+..+.+.+.+.+. ++++++ .+|.++..++ .. +.|.+ ++.++.+|.||+|
T Consensus 61 -----~~~~------~~--~~~~~~~~~~~~~~~~~~~~v~~~~-~~v~~i~~~~---~~-~~v~~-~~~~~~~~~li~A 121 (319)
T 3cty_A 61 -----ENYL------GF--KSIVGSELAKLFADHAANYAKIREG-VEVRSIKKTQ---GG-FDIET-NDDTYHAKYVIIT 121 (319)
T ss_dssp -----CCBT------TB--SSBCHHHHHHHHHHHHHTTSEEEET-CCEEEEEEET---TE-EEEEE-SSSEEEEEEEEEC
T ss_pred -----hhcC------CC--cccCHHHHHHHHHHHHHHcCCEEEE-eeEEEEEEeC---CE-EEEEE-CCCEEEeCEEEEC
Confidence 0000 00 12344556665555442 677777 6899998753 33 66666 5668999999999
Q ss_pred CCCchh
Q 044609 162 DGVHSM 167 (232)
Q Consensus 162 ~G~~S~ 167 (232)
+|.++.
T Consensus 122 tG~~~~ 127 (319)
T 3cty_A 122 TGTTHK 127 (319)
T ss_dssp CCEEEC
T ss_pred CCCCcc
Confidence 998764
No 92
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=99.44 E-value=1e-12 Score=109.79 Aligned_cols=156 Identities=24% Similarity=0.244 Sum_probs=86.3
Q ss_pred ccccEEEECCCHHHHHHHHHHHhCCCcEEEEecCCCCcCc----ceeeeecc-----------cHHHHHHH---cCC---
Q 044609 4 VEEDVVIIGAGIAGLATAVALRRLGIKALVLEKSDGLRAT----GAALTLSP-----------NAWLALDA---LGV--- 62 (232)
Q Consensus 4 ~~~dV~IvG~G~~G~~~A~~L~~~g~~v~viE~~~~~~~~----~~~~~~~~-----------~~~~~l~~---~g~--- 62 (232)
.++||+|||+|++|+++|+.|++.|++|+|+|+.+.++.. +.++.... .....++. .+.
T Consensus 125 ~~~~v~viG~G~aG~~aa~~~~~~g~~v~~~e~~~~~~~~~~~a~gg~~~~~~~~~~~~g~~ds~~~~~~~~~~~g~~~~ 204 (572)
T 1d4d_A 125 ETTDVVIIGSGGAGLAAAVSARDAGAKVILLEKEPIPGGNTKLAAGGMNAAETKPQAKLGIEDKKQIMIDDTMKGGRNIN 204 (572)
T ss_dssp EECSEEEECCSHHHHHHHHHHHSSSCCEEEECSSSSSCTTGGGCCSCEECCSSSTTGGGTCCCCTHHHHHHHHHHTTTCS
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCcEEEEecCCCCCcchhhhCCeeEccCCHHHHHhCCCCCHHHHHHHHHHhcCCCC
Confidence 3579999999999999999999999999999998866421 11221100 00011111 010
Q ss_pred ---------------hHHHHhhccCceeeEEEEcCCCce-eEEeccCCCCCCCCceeeeehHHHHHHHhhhCC--CCeEE
Q 044609 63 ---------------SHKLTSVYAPAKRVFVTNLGTGAT-QELSYAGKSGRIGSGLRSVHRQSLLEALADELP--DDTIQ 124 (232)
Q Consensus 63 ---------------~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~--~~~i~ 124 (232)
.+.+...+.++... ....+.. ..... ..........+.+.|.+.+. +++++
T Consensus 205 ~~~~v~~~~~~~~~~i~~l~~~Gv~~~~~---~~~gg~~~~r~~~--------~~~~~~~g~~l~~~L~~~~~~~gv~i~ 273 (572)
T 1d4d_A 205 DPELVKVLANNSSDSIDWLTSMGADMTDV---GRMGGASVNRSHR--------PTGGAGVGAHVAQVLWDNAVKRGTDIR 273 (572)
T ss_dssp CHHHHHHHHHTHHHHHHHHHHHTCCCCEE---ECCTTCSSCCEEE--------STTTCCHHHHHHHHHHHHHHHTTCEEE
T ss_pred CHHHHHHHHHccHHHHHHHHhcCCccccc---cccCCCcCCeeEe--------cCCCCCCHHHHHHHHHHHHHHcCCeEE
Confidence 00111111111110 0000000 00000 00001234566777766553 89999
Q ss_pred eCceEEEEEecCCCCCccEEEEe--CCCc--EEEccEEEecCCCchhhhhhh
Q 044609 125 FSSKIAAIDSQTLNGSSAAIINL--GDST--IIKAKVLIGCDGVHSMVAQWL 172 (232)
Q Consensus 125 ~~~~v~~i~~~~~~g~~~~~v~~--~~g~--~~~a~~vV~A~G~~S~~r~~~ 172 (232)
++++|+++..+++ +.. +.|.. .+|+ ++.||.||+|+|.+|..++++
T Consensus 274 ~~t~v~~l~~~~~-g~v-~GV~~~~~~G~~~~i~A~~VVlAtGg~~~~~~~~ 323 (572)
T 1d4d_A 274 LNSRVVRILEDAS-GKV-TGVLVKGEYTGYYVIKADAVVIAAGGFAKNNERV 323 (572)
T ss_dssp SSEEEEEEEEC---CCE-EEEEEEETTTEEEEEECSEEEECCCCCTTCHHHH
T ss_pred ecCEEEEEEECCC-CeE-EEEEEEeCCCcEEEEEcCEEEEeCCCCccCHHHH
Confidence 9999999987531 232 33443 3664 689999999999998654433
No 93
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=99.43 E-value=5.2e-12 Score=105.72 Aligned_cols=37 Identities=35% Similarity=0.423 Sum_probs=34.4
Q ss_pred ccccEEEECCCHHHHHHHHHHHhCCCcEEEEecCCCC
Q 044609 4 VEEDVVIIGAGIAGLATAVALRRLGIKALVLEKSDGL 40 (232)
Q Consensus 4 ~~~dV~IvG~G~~G~~~A~~L~~~g~~v~viE~~~~~ 40 (232)
.++||+|||||++|+++|+.|+++|.+|+||||.+..
T Consensus 6 ~~~DVvVVGaG~AGl~AA~~la~~G~~V~vlEK~~~~ 42 (588)
T 2wdq_A 6 REFDAVVIGAGGAGMRAALQISQSGQTCALLSKVFPT 42 (588)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCGG
T ss_pred ccCCEEEECcCHHHHHHHHHHHHCCCcEEEEecCCCC
Confidence 4589999999999999999999999999999998765
No 94
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=99.42 E-value=2.2e-12 Score=99.86 Aligned_cols=119 Identities=21% Similarity=0.258 Sum_probs=73.8
Q ss_pred CCcccccEEEECCCHHHHHHHHHHHhCCCcEEEEecCCCCcCcceeeeecccHHHHHHHcCChHHHHhhccCceeeEEEE
Q 044609 1 MEMVEEDVVIIGAGIAGLATAVALRRLGIKALVLEKSDGLRATGAALTLSPNAWLALDALGVSHKLTSVYAPAKRVFVTN 80 (232)
Q Consensus 1 m~~~~~dV~IvG~G~~G~~~A~~L~~~g~~v~viE~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~ 80 (232)
|+ +.|||+||||||||+++|..|++.|++|+|||+....+....+ . + .....+
T Consensus 1 M~-~~yDvvIIG~GpAGl~AA~~la~~g~~v~liE~~~~gg~~~~G---------------~---~------~~~~~i-- 53 (314)
T 4a5l_A 1 MS-NIHDVVIIGSGPAAHTAAIYLGRSSLKPVMYEGFMAGGVAAGG---------------Q---L------TTTTII-- 53 (314)
T ss_dssp -C-CCEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSGGGCCTTC---------------G---G------GGSSEE--
T ss_pred CC-CCCcEEEECCCHHHHHHHHHHHHCCCCEEEEecCCCCCcccCC---------------C---c------CChHHh--
Confidence 66 4599999999999999999999999999999987532111000 0 0 000000
Q ss_pred cCCCceeEEeccCCCCCCCCceeeeehHHHHHHHhhhCC--CCeEEeCceEEEEEecCCCCCccEEEEeCCCcEEEccEE
Q 044609 81 LGTGATQELSYAGKSGRIGSGLRSVHRQSLLEALADELP--DDTIQFSSKIAAIDSQTLNGSSAAIINLGDSTIIKAKVL 158 (232)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~--~~~i~~~~~v~~i~~~~~~g~~~~~v~~~~g~~~~a~~v 158 (232)
.+++.. + ..+...++.+.+.+.+. +..+... .+....... .. ..+.+.++.++.+|.|
T Consensus 54 --------~~~~g~-----~--~~i~~~~l~~~~~~~~~~~~~~~~~~-~v~~~~~~~---~~-~~~~~~~~~~~~~~~l 113 (314)
T 4a5l_A 54 --------ENFPGF-----P--NGIDGNELMMNMRTQSEKYGTTIITE-TIDHVDFST---QP-FKLFTEEGKEVLTKSV 113 (314)
T ss_dssp --------CCSTTC-----T--TCEEHHHHHHHHHHHHHHTTCEEECC-CEEEEECSS---SS-EEEEETTCCEEEEEEE
T ss_pred --------hhccCC-----c--ccCCHHHHHHHHHHHHhhcCcEEEEe-EEEEeecCC---Cc-eEEEECCCeEEEEeEE
Confidence 011111 1 12455566665555443 4555543 555555443 33 6677788889999999
Q ss_pred EecCCCch
Q 044609 159 IGCDGVHS 166 (232)
Q Consensus 159 V~A~G~~S 166 (232)
|+|+|...
T Consensus 114 iiATG~~~ 121 (314)
T 4a5l_A 114 IIATGATA 121 (314)
T ss_dssp EECCCEEE
T ss_pred EEcccccc
Confidence 99999754
No 95
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=99.41 E-value=1.6e-12 Score=109.11 Aligned_cols=157 Identities=22% Similarity=0.238 Sum_probs=86.9
Q ss_pred ccccEEEECCCHHHHHHHHHHHhCCCcEEEEecCCCCcCcc----eeee--ec---ccHHHH-----HHHc-CCh-----
Q 044609 4 VEEDVVIIGAGIAGLATAVALRRLGIKALVLEKSDGLRATG----AALT--LS---PNAWLA-----LDAL-GVS----- 63 (232)
Q Consensus 4 ~~~dV~IvG~G~~G~~~A~~L~~~g~~v~viE~~~~~~~~~----~~~~--~~---~~~~~~-----l~~~-g~~----- 63 (232)
.++||+|||||++|+++|+.|+++|.+|+||||....+... .++. +. ...++. ++.- ++.
T Consensus 17 ~~~DVvVVG~G~AGl~AAl~aa~~G~~V~vlEK~~~~~g~s~~a~GGi~a~~~~~~~ds~~~~~~dtl~~g~~l~d~~~v 96 (621)
T 2h88_A 17 HEFDAVVVGAGGAGLRAAFGLSEAGFNTACVTKLFPTRSHTVAAQGGINAALGNMEDDNWRWHFYDTVKGSDWLGDQDAI 96 (621)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCGGGSGGGGCCSCEECCCCSSSCCCHHHHHHHHHHHTTTCSCHHHH
T ss_pred ccCCEEEECccHHHHHHHHHHHHCCCcEEEEeccCCCCCCchhhCCCcEecCCCCCCCCHHHHHHHHHHhcCCCCCHHHH
Confidence 35899999999999999999999999999999987543211 1221 11 112211 1110 110
Q ss_pred -----------HHHHhhccCceeeEEEEcCCCceeEEeccCCCCCCC---Cceeee-----ehHHHHHHHhhhCC--CCe
Q 044609 64 -----------HKLTSVYAPAKRVFVTNLGTGATQELSYAGKSGRIG---SGLRSV-----HRQSLLEALADELP--DDT 122 (232)
Q Consensus 64 -----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~-----~~~~l~~~l~~~~~--~~~ 122 (232)
+.+...+.++. ....+......+......+. ...... ....+++.|.+.+. +++
T Consensus 97 ~~l~~~s~~~i~~L~~~Gv~f~-----~~~~g~~~~~~~gg~s~~~g~~~~~~R~~~~~d~tG~~l~~~L~~~~~~~gv~ 171 (621)
T 2h88_A 97 HYMTEQAPAAVIELENYGMPFS-----RTEEGKIYQRAFGGQSLQFGKGGQAHRCCCVADRTGHSLLHTLYGRSLRYDTS 171 (621)
T ss_dssp HHHHHHHHHHHHHHHHTTCCCC-----BCTTSSBCEECCTTCBSTTTTSCBCCCEECSTTCHHHHHHHHHHHHHTTSCCE
T ss_pred HHHHHHHHHHHHHHHHcCCCcc-----cCCCCceeccccCcccccccCCCcceeEEEecCCCHHHHHHHHHHHHHhCCCE
Confidence 11111111111 11111111111111100000 000111 23467777777654 799
Q ss_pred EEeCceEEEEEecCCCCCccEEEEe---CCCc--EEEccEEEecCCCchhh
Q 044609 123 IQFSSKIAAIDSQTLNGSSAAIINL---GDST--IIKAKVLIGCDGVHSMV 168 (232)
Q Consensus 123 i~~~~~v~~i~~~~~~g~~~~~v~~---~~g~--~~~a~~vV~A~G~~S~~ 168 (232)
+++++.|+++..++ +.. ..|.. .+|+ ++.|+.||+|+|.++.+
T Consensus 172 i~~~~~v~~Li~~~--g~v-~Gv~~~~~~~G~~~~i~A~~VVlATGG~~~~ 219 (621)
T 2h88_A 172 YFVEYFALDLLMEN--GEC-RGVIALCIEDGTIHRFRAKNTVIATGGYGRT 219 (621)
T ss_dssp EEETEEEEEEEEET--TEE-EEEEEEETTTCCEEEEEEEEEEECCCCCGGG
T ss_pred EEEceEEEEEEEEC--CEE-EEEEEEEcCCCcEEEEEcCeEEECCCccccc
Confidence 99999999998754 443 33433 4665 68999999999999864
No 96
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=99.41 E-value=1.4e-12 Score=102.08 Aligned_cols=112 Identities=21% Similarity=0.340 Sum_probs=75.4
Q ss_pred ccccEEEECCCHHHHHHHHHHHhCCCcEEEEecCCCCcCcceeeeecccHHHHHHHcCChHHHHhhccCceeeEEEEcCC
Q 044609 4 VEEDVVIIGAGIAGLATAVALRRLGIKALVLEKSDGLRATGAALTLSPNAWLALDALGVSHKLTSVYAPAKRVFVTNLGT 83 (232)
Q Consensus 4 ~~~dV~IvG~G~~G~~~A~~L~~~g~~v~viE~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~ 83 (232)
+.+||+|||||++|+++|..|++.|++|+|||+.. ++ + .+.. ...
T Consensus 13 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~-~g--g-~~~~--------------------~~~----------- 57 (335)
T 2a87_A 13 PVRDVIVIGSGPAGYTAALYAARAQLAPLVFEGTS-FG--G-ALMT--------------------TTD----------- 57 (335)
T ss_dssp CCEEEEEECCHHHHHHHHHHHHHTTCCCEEECCSS-CS--C-GGGS--------------------CSC-----------
T ss_pred CcCCEEEECCCHHHHHHHHHHHhCCCeEEEEecCC-CC--C-ceec--------------------cch-----------
Confidence 45899999999999999999999999999999752 11 1 0000 000
Q ss_pred CceeEEeccCCCCCCCCceeeeehHHHHHHHhhhCC--CCeEEeCceEEEEEecCCCCCccEEE-EeCCCcEEEccEEEe
Q 044609 84 GATQELSYAGKSGRIGSGLRSVHRQSLLEALADELP--DDTIQFSSKIAAIDSQTLNGSSAAII-NLGDSTIIKAKVLIG 160 (232)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~--~~~i~~~~~v~~i~~~~~~g~~~~~v-~~~~g~~~~a~~vV~ 160 (232)
. ..++.. ...+.+..+.+.+.+.+. ++++++++ |.++.. . +. +.| .+.+++++.+|.||+
T Consensus 58 --~--~~~~~~-------~~~~~~~~~~~~l~~~~~~~~v~~~~~~-v~~i~~-~--~~--~~v~~~~~g~~~~~d~lvi 120 (335)
T 2a87_A 58 --V--ENYPGF-------RNGITGPELMDEMREQALRFGADLRMED-VESVSL-H--GP--LKSVVTADGQTHRARAVIL 120 (335)
T ss_dssp --B--CCSTTC-------TTCBCHHHHHHHHHHHHHHTTCEEECCC-EEEEEC-S--SS--SEEEEETTSCEEEEEEEEE
T ss_pred --h--hhcCCC-------CCCCCHHHHHHHHHHHHHHcCCEEEEee-EEEEEe-C--Cc--EEEEEeCCCCEEEeCEEEE
Confidence 0 000100 012345566666655442 78898886 888876 3 33 556 778888899999999
Q ss_pred cCCCchh
Q 044609 161 CDGVHSM 167 (232)
Q Consensus 161 A~G~~S~ 167 (232)
|+|..+.
T Consensus 121 AtG~~~~ 127 (335)
T 2a87_A 121 AMGAAAR 127 (335)
T ss_dssp CCCEEEC
T ss_pred CCCCCcc
Confidence 9998764
No 97
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=99.40 E-value=2.5e-12 Score=104.95 Aligned_cols=151 Identities=16% Similarity=0.213 Sum_probs=82.5
Q ss_pred cccEEEECCCHHHHHHHHHHHhCC-----CcEEEEecCCCCcCcceeeeecccHHHHHHHcCChHHHHhhccCceeeEEE
Q 044609 5 EEDVVIIGAGIAGLATAVALRRLG-----IKALVLEKSDGLRATGAALTLSPNAWLALDALGVSHKLTSVYAPAKRVFVT 79 (232)
Q Consensus 5 ~~dV~IvG~G~~G~~~A~~L~~~g-----~~v~viE~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~ 79 (232)
.+||+|||||++|+++|..|++.| ++|+|||+.+..+..... .+....+. .....++.....+.....+.
T Consensus 30 ~~dVvIIGaG~aGl~aA~~L~~~g~~~~~~~v~liE~~~~~g~~~~~-~~~~~~~~----~~~~~~l~~~~~p~~~~~~~ 104 (463)
T 3s5w_A 30 VHDLIGVGFGPSNIALAIALQERAQAQGALEVLFLDKQGDYRWHGNT-LVSQSELQ----ISFLKDLVSLRNPTSPYSFV 104 (463)
T ss_dssp EESEEEECCSHHHHHHHHHHHHHHHHHCCCCEEEEESCSSCCSSGGG-CCSSCBCS----SCTTSSSSTTTCTTCTTSHH
T ss_pred cCCEEEECCCHHHHHHHHHHHhcccccCcccEEEEecCCCCCCcCCC-CCCCCcCC----cchhhccccccCCCCCCChh
Confidence 479999999999999999999999 999999999866421100 00000000 00000000000000000000
Q ss_pred --EcCCCceeEEeccCCCCCCCCceeeeehHHHHHHHhhhCC--CCeEEeCceEEEEEecCCCCCc-cEEEEeCCCc---
Q 044609 80 --NLGTGATQELSYAGKSGRIGSGLRSVHRQSLLEALADELP--DDTIQFSSKIAAIDSQTLNGSS-AAIINLGDST--- 151 (232)
Q Consensus 80 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~--~~~i~~~~~v~~i~~~~~~g~~-~~~v~~~~g~--- 151 (232)
....+.. ..+. ........+..+.+.+...+. ++.++++++|+++..+++.+.. .+.|.+.++.
T Consensus 105 ~~l~~~~~~--~~~~------~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~~~V~~i~~~~~~~~~~~~~V~~~~g~g~~ 176 (463)
T 3s5w_A 105 NYLHKHDRL--VDFI------NLGTFYPCRMEFNDYLRWVASHFQEQSRYGEEVLRIEPMLSAGQVEALRVISRNADGEE 176 (463)
T ss_dssp HHHHHTTCH--HHHH------HHCCSCCBHHHHHHHHHHHHTTCTTTEEESEEEEEEEEEEETTEEEEEEEEEEETTSCE
T ss_pred HhhhhcCce--eecc------cccCCCCCHHHHHHHHHHHHHHcCCeEEeCCEEEEEEEecCCCceEEEEEEEecCCCce
Confidence 0000000 0000 001123456777777765543 5789999999999876311121 1366666665
Q ss_pred -EEEccEEEecCCCchhh
Q 044609 152 -IIKAKVLIGCDGVHSMV 168 (232)
Q Consensus 152 -~~~a~~vV~A~G~~S~~ 168 (232)
++.+|.||+|+|....+
T Consensus 177 ~~~~~d~lVlAtG~~p~~ 194 (463)
T 3s5w_A 177 LVRTTRALVVSPGGTPRI 194 (463)
T ss_dssp EEEEESEEEECCCCEECC
T ss_pred EEEEeCEEEECCCCCCCC
Confidence 89999999999986543
No 98
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=99.39 E-value=3.9e-13 Score=108.43 Aligned_cols=59 Identities=19% Similarity=0.236 Sum_probs=43.6
Q ss_pred HHHHHHhhhCC--CCeEEeCceEEEEEecCCCCCccEEEEeCCCcEEEccEEEecCCCchhhhhhh
Q 044609 109 SLLEALADELP--DDTIQFSSKIAAIDSQTLNGSSAAIINLGDSTIIKAKVLIGCDGVHSMVAQWL 172 (232)
Q Consensus 109 ~l~~~l~~~~~--~~~i~~~~~v~~i~~~~~~g~~~~~v~~~~g~~~~a~~vV~A~G~~S~~r~~~ 172 (232)
.+.+.|.+.+. |++++++++|++|..++ +.. ..|.+. |+++.||.||.|+|.+...+ ++
T Consensus 197 ~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~--~~~-~gv~~~-g~~~~ad~VV~a~~~~~~~~-ll 257 (425)
T 3ka7_A 197 GIIDALETVISANGGKIHTGQEVSKILIEN--GKA-AGIIAD-DRIHDADLVISNLGHAATAV-LC 257 (425)
T ss_dssp HHHHHHHHHHHHTTCEEECSCCEEEEEEET--TEE-EEEEET-TEEEECSEEEECSCHHHHHH-HT
T ss_pred HHHHHHHHHHHHcCCEEEECCceeEEEEEC--CEE-EEEEEC-CEEEECCEEEECCCHHHHHH-hc
Confidence 45556665553 78999999999999864 342 346664 77899999999999987643 44
No 99
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=99.39 E-value=5.6e-12 Score=103.23 Aligned_cols=62 Identities=32% Similarity=0.459 Sum_probs=47.5
Q ss_pred cccEEEECCCHHHHHHHHHHHhCCCcEEEEecCCCCcCcceee-------------ee--cccHHHHHHHcCChHHH
Q 044609 5 EEDVVIIGAGIAGLATAVALRRLGIKALVLEKSDGLRATGAAL-------------TL--SPNAWLALDALGVSHKL 66 (232)
Q Consensus 5 ~~dV~IvG~G~~G~~~A~~L~~~g~~v~viE~~~~~~~~~~~~-------------~~--~~~~~~~l~~~g~~~~~ 66 (232)
.+||+|||||++|+++|+.|+++|++|+|+|+.+.++...... .. .+...+.++++|+.+.+
T Consensus 16 ~~~v~iiG~G~~Gl~aa~~l~~~g~~v~v~E~~~~~GGr~~t~~~~g~~~~~g~~~~~~~~~~~~~~~~~~gl~~~~ 92 (478)
T 2ivd_A 16 GMNVAVVGGGISGLAVAHHLRSRGTDAVLLESSARLGGAVGTHALAGYLVEQGPNSFLDREPATRALAAALNLEGRI 92 (478)
T ss_dssp -CCEEEECCBHHHHHHHHHHHTTTCCEEEECSSSSSBTTCCEEEETTEEEESSCCCEETTCHHHHHHHHHTTCGGGE
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCCEEEEEcCCCCCceeeeeccCCeeeecChhhhhhhhHHHHHHHHHcCCccee
Confidence 4799999999999999999999999999999998764322111 11 24567888999886543
No 100
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=99.39 E-value=4e-12 Score=104.04 Aligned_cols=54 Identities=17% Similarity=0.158 Sum_probs=43.6
Q ss_pred HHHHHHhhhCCCCeEEeCceEEEEEecCCCCCccEEEEeCCCcEEEccEEEecCCCchh
Q 044609 109 SLLEALADELPDDTIQFSSKIAAIDSQTLNGSSAAIINLGDSTIIKAKVLIGCDGVHSM 167 (232)
Q Consensus 109 ~l~~~l~~~~~~~~i~~~~~v~~i~~~~~~g~~~~~v~~~~g~~~~a~~vV~A~G~~S~ 167 (232)
.+.+.|.+.+..++|+++++|++|+.++ .. +.|++.+| ++.||.||.|.+.+..
T Consensus 237 ~l~~~l~~~l~~~~i~~~~~V~~i~~~~---~~-~~v~~~~g-~~~ad~vV~a~p~~~~ 290 (475)
T 3lov_A 237 SLIERLEEVLERSEIRLETPLLAISRED---GR-YRLKTDHG-PEYADYVLLTIPHPQV 290 (475)
T ss_dssp HHHHHHHHHCSSCEEESSCCCCEEEEET---TE-EEEECTTC-CEEESEEEECSCHHHH
T ss_pred HHHHHHHhhccCCEEEcCCeeeEEEEeC---CE-EEEEECCC-eEECCEEEECCCHHHH
Confidence 4666677666557999999999998764 44 78888888 7999999999988754
No 101
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=99.38 E-value=4.8e-12 Score=104.61 Aligned_cols=115 Identities=25% Similarity=0.337 Sum_probs=78.9
Q ss_pred ccccEEEECCCHHHHHHHHHHHhCCCcEEEEecCCCCcCcceeeeecccHHHHHHHcCChHHHHhhccCceeeEEEEcCC
Q 044609 4 VEEDVVIIGAGIAGLATAVALRRLGIKALVLEKSDGLRATGAALTLSPNAWLALDALGVSHKLTSVYAPAKRVFVTNLGT 83 (232)
Q Consensus 4 ~~~dV~IvG~G~~G~~~A~~L~~~g~~v~viE~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~ 83 (232)
..+||+||||||+|+++|..|++.|++|+|+|+.. .+. .. ...++ .
T Consensus 211 ~~~dVvIIGgG~AGl~aA~~la~~G~~v~lie~~~----GG~--~~--------~~~~~--------------------~ 256 (521)
T 1hyu_A 211 DAYDVLIVGSGPAGAAAAVYSARKGIRTGLMGERF----GGQ--VL--------DTVDI--------------------E 256 (521)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSST----TGG--GT--------TCSCB--------------------C
T ss_pred CcccEEEECCcHHHHHHHHHHHhCCCeEEEEECCC----CCc--cc--------ccccc--------------------c
Confidence 35899999999999999999999999999998631 110 00 00000 0
Q ss_pred CceeEEeccCCCCCCCCceeeeehHHHHHHHhhhCC--CCeEEeCceEEEEEecCCCCCccEEEEeCCCcEEEccEEEec
Q 044609 84 GATQELSYAGKSGRIGSGLRSVHRQSLLEALADELP--DDTIQFSSKIAAIDSQTLNGSSAAIINLGDSTIIKAKVLIGC 161 (232)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~--~~~i~~~~~v~~i~~~~~~g~~~~~v~~~~g~~~~a~~vV~A 161 (232)
.+.. .....+..+.+.+.+.+. +++++.+++|+++..+.+.+.. +.|.+.+|.++.+|.||+|
T Consensus 257 ------~~~~--------~~~~~~~~l~~~l~~~~~~~gv~v~~~~~v~~i~~~~~~~~~-~~V~~~~g~~~~~d~vVlA 321 (521)
T 1hyu_A 257 ------NYIS--------VPKTEGQKLAGALKAHVSDYDVDVIDSQSASKLVPAATEGGL-HQIETASGAVLKARSIIIA 321 (521)
T ss_dssp ------CBTT--------BSSBCHHHHHHHHHHHHHTSCEEEECSCCEEEEECCSSTTSC-EEEEETTSCEEEEEEEEEC
T ss_pred ------ccCC--------CCCCCHHHHHHHHHHHHHHcCCEEEcCCEEEEEEeccCCCce-EEEEECCCCEEEcCEEEEC
Confidence 0000 001345566666655442 7899999999999764321234 7888899989999999999
Q ss_pred CCCchh
Q 044609 162 DGVHSM 167 (232)
Q Consensus 162 ~G~~S~ 167 (232)
+|.++.
T Consensus 322 tG~~~~ 327 (521)
T 1hyu_A 322 TGAKWR 327 (521)
T ss_dssp CCEEEC
T ss_pred CCCCcC
Confidence 998764
No 102
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=99.37 E-value=1.1e-11 Score=102.49 Aligned_cols=54 Identities=17% Similarity=0.222 Sum_probs=42.2
Q ss_pred HHHHHHhhhCCCCeEEeCceEEEEEecCCCCCccEEEEeCCCcEEEccEEEecCCCchh
Q 044609 109 SLLEALADELPDDTIQFSSKIAAIDSQTLNGSSAAIINLGDSTIIKAKVLIGCDGVHSM 167 (232)
Q Consensus 109 ~l~~~l~~~~~~~~i~~~~~v~~i~~~~~~g~~~~~v~~~~g~~~~a~~vV~A~G~~S~ 167 (232)
.+.+.|.+.+ +++++++++|++|..++ .. +.|.+.+|+++.||.||.|.+....
T Consensus 216 ~l~~~l~~~l-g~~i~~~~~V~~i~~~~---~~-v~v~~~~g~~~~ad~VI~a~p~~~l 269 (520)
T 1s3e_A 216 QVSERIMDLL-GDRVKLERPVIYIDQTR---EN-VLVETLNHEMYEAKYVISAIPPTLG 269 (520)
T ss_dssp HHHHHHHHHH-GGGEESSCCEEEEECSS---SS-EEEEETTSCEEEESEEEECSCGGGG
T ss_pred HHHHHHHHHc-CCcEEcCCeeEEEEECC---Ce-EEEEECCCeEEEeCEEEECCCHHHH
Confidence 3445555443 57899999999998764 34 7788999989999999999998763
No 103
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=99.37 E-value=7.2e-12 Score=103.60 Aligned_cols=57 Identities=18% Similarity=0.308 Sum_probs=45.3
Q ss_pred hHHHHHHHhhhCCCCeEEeCceEEEEEecCCCCCccEEEEeCCCcEEEccEEEecCCCch
Q 044609 107 RQSLLEALADELPDDTIQFSSKIAAIDSQTLNGSSAAIINLGDSTIIKAKVLIGCDGVHS 166 (232)
Q Consensus 107 ~~~l~~~l~~~~~~~~i~~~~~v~~i~~~~~~g~~~~~v~~~~g~~~~a~~vV~A~G~~S 166 (232)
...+.+.|.+.+++.+|+++++|++|..++ +.. +.|.+.+|+++.||.||.|.+...
T Consensus 201 ~~~l~~~l~~~l~~~~i~~~~~V~~I~~~~--~~~-v~v~~~~g~~~~ad~VI~t~p~~~ 257 (516)
T 1rsg_A 201 YDSVVQRIAQSFPQNWLKLSCEVKSITREP--SKN-VTVNCEDGTVYNADYVIITVPQSV 257 (516)
T ss_dssp HHHHHHHHHTTSCGGGEETTCCEEEEEECT--TSC-EEEEETTSCEEEEEEEEECCCHHH
T ss_pred HHHHHHHHHHhCCCCEEEECCEEEEEEEcC--CCe-EEEEECCCcEEECCEEEECCCHHH
Confidence 455666677666556899999999998753 344 888999998899999999998654
No 104
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=99.36 E-value=2.9e-12 Score=105.11 Aligned_cols=45 Identities=13% Similarity=0.162 Sum_probs=38.6
Q ss_pred CCeEEeCceEEEEEecCCCCCccEEEEeCCCcEEEccEEEecCCCchhh
Q 044609 120 DDTIQFSSKIAAIDSQTLNGSSAAIINLGDSTIIKAKVLIGCDGVHSMV 168 (232)
Q Consensus 120 ~~~i~~~~~v~~i~~~~~~g~~~~~v~~~~g~~~~a~~vV~A~G~~S~~ 168 (232)
+++++.+++|++++.++ .. +.|.+.+|+++.||.||.|+|..+..
T Consensus 246 Gv~i~~~~~V~~i~~~~---~~-v~v~~~~g~~i~aD~Vi~A~G~~p~~ 290 (484)
T 3o0h_A 246 GISIIYEATVSQVQSTE---NC-YNVVLTNGQTICADRVMLATGRVPNT 290 (484)
T ss_dssp TCEEESSCCEEEEEECS---SS-EEEEETTSCEEEESEEEECCCEEECC
T ss_pred CCEEEeCCEEEEEEeeC---CE-EEEEECCCcEEEcCEEEEeeCCCcCC
Confidence 79999999999998764 34 77888999899999999999987653
No 105
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=99.36 E-value=4.5e-12 Score=102.19 Aligned_cols=58 Identities=17% Similarity=0.257 Sum_probs=43.5
Q ss_pred HHHHHHhhhCC--CCeEEeCceEEEEEecCCCCCccEEEEeCCCcEEEccEEEecCCCchhhhhhhc
Q 044609 109 SLLEALADELP--DDTIQFSSKIAAIDSQTLNGSSAAIINLGDSTIIKAKVLIGCDGVHSMVAQWLG 173 (232)
Q Consensus 109 ~l~~~l~~~~~--~~~i~~~~~v~~i~~~~~~g~~~~~v~~~~g~~~~a~~vV~A~G~~S~~r~~~~ 173 (232)
.+.+.|.+.++ |++++++++|++|..++ .. + | ..+|+++.||.||.|.|.+... ++++
T Consensus 190 ~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~---~~-v-V-~~~g~~~~ad~Vv~a~~~~~~~-~ll~ 249 (421)
T 3nrn_A 190 AVIDELERIIMENKGKILTRKEVVEINIEE---KK-V-Y-TRDNEEYSFDVAISNVGVRETV-KLIG 249 (421)
T ss_dssp HHHHHHHHHHHTTTCEEESSCCEEEEETTT---TE-E-E-ETTCCEEECSEEEECSCHHHHH-HHHC
T ss_pred HHHHHHHHHHHHCCCEEEcCCeEEEEEEEC---CE-E-E-EeCCcEEEeCEEEECCCHHHHH-HhcC
Confidence 45555655543 78999999999998763 44 6 5 5677889999999999998654 4554
No 106
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=99.34 E-value=1.1e-11 Score=101.30 Aligned_cols=31 Identities=52% Similarity=0.783 Sum_probs=30.4
Q ss_pred cEEEECCCHHHHHHHHHHHhCCCcEEEEecC
Q 044609 7 DVVIIGAGIAGLATAVALRRLGIKALVLEKS 37 (232)
Q Consensus 7 dV~IvG~G~~G~~~A~~L~~~g~~v~viE~~ 37 (232)
||+|||||++|+++|+.|++.|.+|+||||.
T Consensus 1 DVvVIG~G~AGl~aA~~la~~G~~V~viek~ 31 (472)
T 2e5v_A 1 MIYIIGSGIAGLSAGVALRRAGKKVTLISKR 31 (472)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCEEEEeCC
Confidence 7999999999999999999999999999998
No 107
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=99.33 E-value=1.2e-11 Score=102.09 Aligned_cols=52 Identities=23% Similarity=0.346 Sum_probs=41.3
Q ss_pred HHHHHHHhhhCC--CCeEEeCceEEEEEecCCCCCccEEEEeCCCcEEEccEEEecCCCc
Q 044609 108 QSLLEALADELP--DDTIQFSSKIAAIDSQTLNGSSAAIINLGDSTIIKAKVLIGCDGVH 165 (232)
Q Consensus 108 ~~l~~~l~~~~~--~~~i~~~~~v~~i~~~~~~g~~~~~v~~~~g~~~~a~~vV~A~G~~ 165 (232)
..+.+.|.+.++ +++++++++|++|..++ . .+++.+|+++.||.||.+.-..
T Consensus 222 ~~l~~~l~~~l~~~g~~i~~~~~V~~I~~~~---~---~v~~~~G~~~~ad~vI~t~P~~ 275 (513)
T 4gde_A 222 GGIWIAVANTLPKEKTRFGEKGKVTKVNANN---K---TVTLQDGTTIGYKKLVSTMAVD 275 (513)
T ss_dssp HHHHHHHHHTSCGGGEEESGGGCEEEEETTT---T---EEEETTSCEEEEEEEEECSCHH
T ss_pred HHHHHHHHHHHHhcCeeeecceEEEEEEccC---C---EEEEcCCCEEECCEEEECCCHH
Confidence 567888888775 67999999999998763 3 2457899999999999876543
No 108
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=99.32 E-value=2.1e-12 Score=97.97 Aligned_cols=38 Identities=39% Similarity=0.589 Sum_probs=34.9
Q ss_pred ccccEEEECCCHHHHHHHHHHHhCCCcEEEEecCCCCc
Q 044609 4 VEEDVVIIGAGIAGLATAVALRRLGIKALVLEKSDGLR 41 (232)
Q Consensus 4 ~~~dV~IvG~G~~G~~~A~~L~~~g~~v~viE~~~~~~ 41 (232)
|++||+||||||+||++|+.|+++|++|+||||.+.++
T Consensus 1 Mt~dV~IIGaGpaGL~aA~~La~~G~~V~v~Ek~~~~G 38 (336)
T 3kkj_A 1 MTVPIAIIGTGIAGLSAAQALTAAGHQVHLFDKSRGSG 38 (336)
T ss_dssp -CCCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSC
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCC
Confidence 44899999999999999999999999999999998774
No 109
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=99.32 E-value=1.6e-11 Score=100.51 Aligned_cols=36 Identities=39% Similarity=0.636 Sum_probs=33.6
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCC--cEEEEecCCCCc
Q 044609 6 EDVVIIGAGIAGLATAVALRRLGI--KALVLEKSDGLR 41 (232)
Q Consensus 6 ~dV~IvG~G~~G~~~A~~L~~~g~--~v~viE~~~~~~ 41 (232)
+||+|||||++||++|+.|+++|. +|+|+|+.+.++
T Consensus 3 ~dVvVIGaGiaGLsaA~~L~~~G~~~~V~vlEa~~~~G 40 (477)
T 3nks_A 3 RTVVVLGGGISGLAASYHLSRAPCPPKVVLVESSERLG 40 (477)
T ss_dssp CEEEEECCBHHHHHHHHHHHTSSSCCEEEEECSSSSSB
T ss_pred ceEEEECCcHHHHHHHHHHHhCCCCCcEEEEeCCCCCC
Confidence 699999999999999999999999 999999987664
No 110
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=99.31 E-value=2.2e-11 Score=100.16 Aligned_cols=60 Identities=25% Similarity=0.441 Sum_probs=46.0
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCcEEEEecCCCCcCcceee-------e--------ecccHHHHHHHcCChHH
Q 044609 6 EDVVIIGAGIAGLATAVALRRLGIKALVLEKSDGLRATGAAL-------T--------LSPNAWLALDALGVSHK 65 (232)
Q Consensus 6 ~dV~IvG~G~~G~~~A~~L~~~g~~v~viE~~~~~~~~~~~~-------~--------~~~~~~~~l~~~g~~~~ 65 (232)
+||+|||||++|+++|+.|+++|++|+|+|+.+.++...... . ..++..+.++++|+.+.
T Consensus 40 ~~v~iiGaG~aGl~aA~~l~~~g~~v~v~E~~~~~GGr~~t~~~~g~~~d~G~~~~~~~~~~~~~~l~~lgl~~~ 114 (495)
T 2vvm_A 40 WDVIVIGGGYCGLTATRDLTVAGFKTLLLEARDRIGGRSWSSNIDGYPYEMGGTWVHWHQSHVWREITRYKMHNA 114 (495)
T ss_dssp EEEEEECCBHHHHHHHHHHHHTTCCEEEECSSSBSBTTCCEEEETTEEEECSCCCBCTTSHHHHHHHHHTTCTTC
T ss_pred CCEEEECCcHHHHHHHHHHHHCCCCEEEEeCCCCCCCcceecccCCeeecCCCeEecCccHHHHHHHHHcCCcce
Confidence 799999999999999999999999999999998764321111 0 13456677778887543
No 111
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=99.31 E-value=1.1e-12 Score=106.02 Aligned_cols=36 Identities=36% Similarity=0.613 Sum_probs=33.5
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCcEEEEecCCCCc
Q 044609 6 EDVVIIGAGIAGLATAVALRRLGIKALVLEKSDGLR 41 (232)
Q Consensus 6 ~dV~IvG~G~~G~~~A~~L~~~g~~v~viE~~~~~~ 41 (232)
+||+|||||++|+++|+.|++.|++|+|||+++.++
T Consensus 2 ~dVvVIGaG~aGl~aA~~L~~~G~~V~vlE~~~~~G 37 (431)
T 3k7m_X 2 YDAIVVGGGFSGLKAARDLTNAGKKVLLLEGGERLG 37 (431)
T ss_dssp EEEEEECCBHHHHHHHHHHHHTTCCEEEECSSSSSB
T ss_pred CCEEEECCcHHHHHHHHHHHHcCCeEEEEecCCCcc
Confidence 699999999999999999999999999999977653
No 112
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=99.30 E-value=6.8e-11 Score=96.14 Aligned_cols=41 Identities=41% Similarity=0.687 Sum_probs=37.3
Q ss_pred CCcccccEEEECCCHHHHHHHHHHHhCCCcEEEEecCCCCc
Q 044609 1 MEMVEEDVVIIGAGIAGLATAVALRRLGIKALVLEKSDGLR 41 (232)
Q Consensus 1 m~~~~~dV~IvG~G~~G~~~A~~L~~~g~~v~viE~~~~~~ 41 (232)
|.++++||+|||||++|+++|+.|++.|++|+|+|+.+.++
T Consensus 1 m~~~~~~v~iiG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~G 41 (453)
T 2yg5_A 1 VPTLQRDVAIVGAGPSGLAAATALRKAGLSVAVIEARDRVG 41 (453)
T ss_dssp -CEEEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSC
T ss_pred CCCCcCCEEEECCCHHHHHHHHHHHHCCCcEEEEECCCCCC
Confidence 77778999999999999999999999999999999987764
No 113
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=99.28 E-value=1.6e-12 Score=106.15 Aligned_cols=143 Identities=15% Similarity=0.177 Sum_probs=76.8
Q ss_pred cccEEEECCCHHHHHHHHHHHhCCCcEEEEecCCCCcCcceeeeec-ccHHHHHHHcCChHHHHhhccCceeeEEEEcCC
Q 044609 5 EEDVVIIGAGIAGLATAVALRRLGIKALVLEKSDGLRATGAALTLS-PNAWLALDALGVSHKLTSVYAPAKRVFVTNLGT 83 (232)
Q Consensus 5 ~~dV~IvG~G~~G~~~A~~L~~~g~~v~viE~~~~~~~~~~~~~~~-~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~ 83 (232)
++||+|||||++|+++|..|++.|++|+|||+. ..+ +...... ..+...+...++.+.+...... .++. . .
T Consensus 3 ~~dvvIIGaG~aGl~aA~~l~~~G~~V~liE~~-~~g--G~~~~~g~~psk~ll~~~~~~~~~~~~~~~-~g~~--~--~ 74 (464)
T 2a8x_A 3 HYDVVVLGAGPGGYVAAIRAAQLGLSTAIVEPK-YWG--GVCLNVGCIPSKALLRNAELVHIFTKDAKA-FGIS--G--E 74 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSS-CTT--HHHHHHSHHHHHHHHHHHHHHHHHHHHTTT-TTEE--E--C
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCC-CCC--CcccccCchhhHHHHHHHHHHHHHHHHHHh-cCCC--C--C
Confidence 589999999999999999999999999999997 321 1110000 0112222322233333211111 1111 0 0
Q ss_pred CceeEEeccCCCCCCCCceeeeehHHHHHHHhhhC--CCCeEEeCceEEEEEecCCCCCccEEEEeCCC--cEEEccEEE
Q 044609 84 GATQELSYAGKSGRIGSGLRSVHRQSLLEALADEL--PDDTIQFSSKIAAIDSQTLNGSSAAIINLGDS--TIIKAKVLI 159 (232)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~--~~~~i~~~~~v~~i~~~~~~g~~~~~v~~~~g--~~~~a~~vV 159 (232)
...++..... . .... ...+.+.+.+.+ .+++++.++.+. .+ ... +.|.+.+| .++.+|.||
T Consensus 75 ---~~~~~~~~~~--~-~~~~--~~~l~~~l~~~~~~~gv~~~~g~~~~---id---~~~-v~V~~~~G~~~~~~~d~lV 139 (464)
T 2a8x_A 75 ---VTFDYGIAYD--R-SRKV--AEGRVAGVHFLMKKNKITEIHGYGTF---AD---ANT-LLVDLNDGGTESVTFDNAI 139 (464)
T ss_dssp ---CEECHHHHHH--H-HHHH--HHHHHHHHHHHHHHTTCEEECEEEEE---SS---SSE-EEEEETTSCCEEEEEEEEE
T ss_pred ---CccCHHHHHH--H-HHHH--HHHHHHHHHHHHHhCCCEEEEeEEEE---ec---CCe-EEEEeCCCceEEEEcCEEE
Confidence 0111110000 0 0000 012222222222 278888887543 23 234 77888888 689999999
Q ss_pred ecCCCchhhhh
Q 044609 160 GCDGVHSMVAQ 170 (232)
Q Consensus 160 ~A~G~~S~~r~ 170 (232)
+|+|..+....
T Consensus 140 iAtG~~~~~~~ 150 (464)
T 2a8x_A 140 IATGSSTRLVP 150 (464)
T ss_dssp ECCCEEECCCT
T ss_pred ECCCCCCCCCC
Confidence 99999875433
No 114
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=99.27 E-value=5e-11 Score=92.09 Aligned_cols=112 Identities=25% Similarity=0.269 Sum_probs=73.2
Q ss_pred ccccEEEECCCHHHHHHHHHHHhCCCcEEE-EecCCCCcCcceeeeecccHHHHHHHcCChHHHHhhccCceeeEEEEcC
Q 044609 4 VEEDVVIIGAGIAGLATAVALRRLGIKALV-LEKSDGLRATGAALTLSPNAWLALDALGVSHKLTSVYAPAKRVFVTNLG 82 (232)
Q Consensus 4 ~~~dV~IvG~G~~G~~~A~~L~~~g~~v~v-iE~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~ 82 (232)
..+||+|||||++|+++|..|+++|++|+| +||. .++... .. . ..
T Consensus 3 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~li~e~~-~~gG~~---~~-------------------~-~~---------- 48 (315)
T 3r9u_A 3 AMLDVAIIGGGPAGLSAGLYATRGGLKNVVMFEKG-MPGGQI---TS-------------------S-SE---------- 48 (315)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHHHTCSCEEEECSS-STTGGG---GG-------------------C-SC----------
T ss_pred CCceEEEECCCHHHHHHHHHHHHCCCCeEEEEeCC-CCCcee---ee-------------------e-ce----------
Confidence 457999999999999999999999999999 9993 331110 00 0 00
Q ss_pred CCceeEEeccCCCCCCCCceeeeehHHHHHHHhhhCC--CCeEEeCceEEEEEecCCCCCccEEE-EeCCCcEEEccEEE
Q 044609 83 TGATQELSYAGKSGRIGSGLRSVHRQSLLEALADELP--DDTIQFSSKIAAIDSQTLNGSSAAII-NLGDSTIIKAKVLI 159 (232)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~--~~~i~~~~~v~~i~~~~~~g~~~~~v-~~~~g~~~~a~~vV 159 (232)
...++. ....+....+.+.+.+.+. +++++.+ +|.++ .+++ ... +.+ ...++ ++.+|.||
T Consensus 49 -----~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~v~~i-~~~~-~~~-~~v~~~~~~-~~~~d~lv 111 (315)
T 3r9u_A 49 -----IENYPG-------VAQVMDGISFMAPWSEQCMRFGLKHEMV-GVEQI-LKNS-DGS-FTIKLEGGK-TELAKAVI 111 (315)
T ss_dssp -----BCCSTT-------CCSCBCHHHHHHHHHHHHTTTCCEEECC-CEEEE-EECT-TSC-EEEEETTSC-EEEEEEEE
T ss_pred -----eccCCC-------CCCCCCHHHHHHHHHHHHHHcCcEEEEE-EEEEE-ecCC-CCc-EEEEEecCC-EEEeCEEE
Confidence 000110 0113456677777766554 6888887 88898 5431 133 664 22344 89999999
Q ss_pred ecCCCch
Q 044609 160 GCDGVHS 166 (232)
Q Consensus 160 ~A~G~~S 166 (232)
+|+|...
T Consensus 112 lAtG~~~ 118 (315)
T 3r9u_A 112 VCTGSAP 118 (315)
T ss_dssp ECCCEEE
T ss_pred EeeCCCC
Confidence 9999854
No 115
>1jnr_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1jnz_A* 2fjb_A* 2fja_A* 2fjd_A* 2fje_A*
Probab=99.26 E-value=4.3e-11 Score=101.25 Aligned_cols=37 Identities=35% Similarity=0.548 Sum_probs=33.5
Q ss_pred ccccEEEECCCHHHHHHHHHHH---h-CCCcEEEEecCCCC
Q 044609 4 VEEDVVIIGAGIAGLATAVALR---R-LGIKALVLEKSDGL 40 (232)
Q Consensus 4 ~~~dV~IvG~G~~G~~~A~~L~---~-~g~~v~viE~~~~~ 40 (232)
.++||+|||||++|+++|+.|+ + +|.+|+||||....
T Consensus 21 ~~~DVvVIG~G~AGl~AAl~aa~~~~~~G~~V~vlEK~~~~ 61 (643)
T 1jnr_A 21 VETDILIIGGGFSGCGAAYEAAYWAKLGGLKVTLVEKAAVE 61 (643)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHHHTTTTCCEEEECSSCTT
T ss_pred ccCCEEEECcCHHHHHHHHHHhhhhhhCCCeEEEEeCcCCC
Confidence 3489999999999999999999 6 89999999998754
No 116
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=99.25 E-value=1.8e-11 Score=100.30 Aligned_cols=37 Identities=41% Similarity=0.606 Sum_probs=34.2
Q ss_pred ccccEEEECCCHHHHHHHHHHHhCCCcEEEEecCCCC
Q 044609 4 VEEDVVIIGAGIAGLATAVALRRLGIKALVLEKSDGL 40 (232)
Q Consensus 4 ~~~dV~IvG~G~~G~~~A~~L~~~g~~v~viE~~~~~ 40 (232)
.++||+|||||++|+++|..|++.|++|+|||+.+.+
T Consensus 4 ~~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~~~ 40 (478)
T 1v59_A 4 KSHDVVIIGGGPAGYVAAIKAAQLGFNTACVEKRGKL 40 (478)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSS
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCc
Confidence 4689999999999999999999999999999997655
No 117
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=99.25 E-value=2.5e-11 Score=98.08 Aligned_cols=114 Identities=20% Similarity=0.285 Sum_probs=72.5
Q ss_pred CCcccccEEEECCCHHHHHHHHHHHhCCC--cEEEEecCCCCcCcceeeeecccHHHHHHHcCChHHHHhhccCceeeEE
Q 044609 1 MEMVEEDVVIIGAGIAGLATAVALRRLGI--KALVLEKSDGLRATGAALTLSPNAWLALDALGVSHKLTSVYAPAKRVFV 78 (232)
Q Consensus 1 m~~~~~dV~IvG~G~~G~~~A~~L~~~g~--~v~viE~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~ 78 (232)
|. +.+||+|||||++|+++|..|++.|. +|+|||+.+...... +. +...+..
T Consensus 1 M~-~~~~vvIIGgG~aGl~aA~~l~~~g~~~~V~lie~~~~~~~~~------~~---------l~~~~~~---------- 54 (431)
T 1q1r_A 1 MN-ANDNVVIVGTGLAGVEVAFGLRASGWEGNIRLVGDATVIPHHL------PP---------LSKAYLA---------- 54 (431)
T ss_dssp -C-CSCEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSCCSCCBCS------GG---------GGTTTTT----------
T ss_pred CC-CCCcEEEEcCHHHHHHHHHHHHccCcCCCEEEEECCCCCCCcC------CC---------CcHHHhC----------
Confidence 54 46899999999999999999999998 799999876431100 00 0000000
Q ss_pred EEcCCCceeEEeccCCCCCCCCceeeeehHHHHHHHhhhCCCCeEEeCceEEEEEecCCCCCccEEEEeCCCcEEEccEE
Q 044609 79 TNLGTGATQELSYAGKSGRIGSGLRSVHRQSLLEALADELPDDTIQFSSKIAAIDSQTLNGSSAAIINLGDSTIIKAKVL 158 (232)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~i~~~~~v~~i~~~~~~g~~~~~v~~~~g~~~~a~~v 158 (232)
+. . ........ ..+.+.+ .+++++.+++|+.+..++ ..|.+.+|+++.+|.|
T Consensus 55 -----~~---~---------~~~~~~~~---~~~~~~~--~gv~~~~~~~v~~i~~~~------~~v~~~~g~~~~~d~l 106 (431)
T 1q1r_A 55 -----GK---A---------TAESLYLR---TPDAYAA--QNIQLLGGTQVTAINRDR------QQVILSDGRALDYDRL 106 (431)
T ss_dssp -----TC---S---------CSGGGBSS---CHHHHHH--TTEEEECSCCEEEEETTT------TEEEETTSCEEECSEE
T ss_pred -----CC---C---------ChHHhccc---CHHHHHh--CCCEEEeCCEEEEEECCC------CEEEECCCCEEECCEE
Confidence 00 0 00000000 1122332 278999999999997653 2356678888999999
Q ss_pred EecCCCchhh
Q 044609 159 IGCDGVHSMV 168 (232)
Q Consensus 159 V~A~G~~S~~ 168 (232)
|+|+|..+..
T Consensus 107 viAtG~~p~~ 116 (431)
T 1q1r_A 107 VLATGGRPRP 116 (431)
T ss_dssp EECCCEEECC
T ss_pred EEcCCCCccC
Confidence 9999987643
No 118
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=99.24 E-value=2.8e-12 Score=100.95 Aligned_cols=34 Identities=32% Similarity=0.434 Sum_probs=31.7
Q ss_pred cEEEECCCHHHHHHHHHHHhCC------CcEEEEecCCCC
Q 044609 7 DVVIIGAGIAGLATAVALRRLG------IKALVLEKSDGL 40 (232)
Q Consensus 7 dV~IvG~G~~G~~~A~~L~~~g------~~v~viE~~~~~ 40 (232)
||+|||||++|+++|+.|+++| .+|+|||+....
T Consensus 2 dVvIIGgGi~Gls~A~~La~~G~~~~p~~~V~vlE~~~~~ 41 (351)
T 3g3e_A 2 RVVVIGAGVIGLSTALCIHERYHSVLQPLDIKVYADRFTP 41 (351)
T ss_dssp EEEEECCSHHHHHHHHHHHHHHTTTSSSCEEEEEESSCGG
T ss_pred cEEEECCCHHHHHHHHHHHHhccccCCCceEEEEECCCCC
Confidence 8999999999999999999998 999999998643
No 119
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=99.24 E-value=4.4e-11 Score=97.67 Aligned_cols=40 Identities=35% Similarity=0.471 Sum_probs=35.3
Q ss_pred CCcccccEEEECCCHHHHHHHHHHHhCCCcEEEEecCCCCc
Q 044609 1 MEMVEEDVVIIGAGIAGLATAVALRRLGIKALVLEKSDGLR 41 (232)
Q Consensus 1 m~~~~~dV~IvG~G~~G~~~A~~L~~~g~~v~viE~~~~~~ 41 (232)
|+ ++|||+|||||++|+++|..|++.|++|+||||.+.++
T Consensus 1 M~-~~~DVvVIGgG~aGl~aA~~l~~~G~~V~liEk~~~~G 40 (466)
T 3l8k_A 1 MS-LKYDVVVIGAGGAGYHGAFRLAKAKYNVLMADPKGELG 40 (466)
T ss_dssp -C-EEEEEEEECCSHHHHHHHHHHHHTTCCEEEECTTSSSS
T ss_pred CC-ccceEEEECCCHHHHHHHHHHHhCCCeEEEEECCCCCC
Confidence 55 46999999999999999999999999999999877653
No 120
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=99.24 E-value=1.9e-11 Score=99.69 Aligned_cols=37 Identities=27% Similarity=0.440 Sum_probs=33.2
Q ss_pred CCcccccEEEECCCHHHHHHHHHHHhCCCcEEEEecC
Q 044609 1 MEMVEEDVVIIGAGIAGLATAVALRRLGIKALVLEKS 37 (232)
Q Consensus 1 m~~~~~dV~IvG~G~~G~~~A~~L~~~g~~v~viE~~ 37 (232)
|.++++||+|||||++|+++|+.|++.|++|+||||.
T Consensus 1 M~~~~~DVvVIGaG~aGl~aA~~la~~G~~V~liEk~ 37 (463)
T 4dna_A 1 MSAFDYDLFVIGGGSGGVRSGRLAAALGKKVAIAEEF 37 (463)
T ss_dssp --CCSEEEEEECCSHHHHHHHHHHHTTTCCEEEEESS
T ss_pred CCCCCCcEEEECcCHHHHHHHHHHHhCCCEEEEEeCC
Confidence 6666799999999999999999999999999999994
No 121
>3gyx_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=99.24 E-value=1.7e-11 Score=103.62 Aligned_cols=37 Identities=22% Similarity=0.352 Sum_probs=33.8
Q ss_pred ccccEEEECCCHHHHHHHHHHHhC------CCcEEEEecCCCC
Q 044609 4 VEEDVVIIGAGIAGLATAVALRRL------GIKALVLEKSDGL 40 (232)
Q Consensus 4 ~~~dV~IvG~G~~G~~~A~~L~~~------g~~v~viE~~~~~ 40 (232)
.++||+|||||++|+++|+.|++. |.+|+||||....
T Consensus 21 ~~~DVvVVG~G~AGL~AAl~aa~~~~~~~pG~~V~vleK~~~~ 63 (662)
T 3gyx_A 21 HSVDLLMVGGGMGNCGAAFEAVRWADKYAPEAKILLVDKASLE 63 (662)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHHHHHHCTTCCEEEECSSCTT
T ss_pred EEcCEEEECCCHHHHHHHHHHHhhccccCCCCcEEEEEecCCC
Confidence 458999999999999999999997 9999999998654
No 122
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=99.23 E-value=6e-12 Score=101.96 Aligned_cols=113 Identities=17% Similarity=0.202 Sum_probs=71.7
Q ss_pred CCcccccEEEECCCHHHHHHHHHHHh---CCCcEEEEecCCCCcCcceeeeecccHHHHHHHcCChHHHHhhccCceeeE
Q 044609 1 MEMVEEDVVIIGAGIAGLATAVALRR---LGIKALVLEKSDGLRATGAALTLSPNAWLALDALGVSHKLTSVYAPAKRVF 77 (232)
Q Consensus 1 m~~~~~dV~IvG~G~~G~~~A~~L~~---~g~~v~viE~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~ 77 (232)
|+.| .||+|||||++|+++|..|++ .|++|+|||+.+.... .+...... ....
T Consensus 1 M~~m-~~vvIIGgG~aGl~aA~~L~~~~~~g~~Vtlie~~~~~~~-------~~~~~~~~----------~g~~------ 56 (437)
T 3sx6_A 1 MRGS-AHVVILGAGTGGMPAAYEMKEALGSGHEVTLISANDYFQF-------VPSNPWVG----------VGWK------ 56 (437)
T ss_dssp CTTS-CEEEEECCSTTHHHHHHHHHHHHGGGSEEEEECSSSEEEC-------GGGHHHHH----------HTSS------
T ss_pred CCCC-CcEEEECCcHHHHHHHHHHhccCCCcCEEEEEeCCCCCcc-------cCCccccc----------cCcc------
Confidence 5544 699999999999999999999 8999999999873211 11100000 0000
Q ss_pred EEEcCCCceeEEeccCCCCCCCCceeeeehHHHHHHHhhhCCCCeEEeCceEEEEEecCCCCCccEEEEeCCCcEEEccE
Q 044609 78 VTNLGTGATQELSYAGKSGRIGSGLRSVHRQSLLEALADELPDDTIQFSSKIAAIDSQTLNGSSAAIINLGDSTIIKAKV 157 (232)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~i~~~~~v~~i~~~~~~g~~~~~v~~~~g~~~~a~~ 157 (232)
........ +.+.+.+ .+++++. .+|+++..++ ..|.+.+++++.+|.
T Consensus 57 ---------------------~~~~~~~~---l~~~~~~--~gv~~~~-~~v~~id~~~------~~V~~~~g~~i~~d~ 103 (437)
T 3sx6_A 57 ---------------------ERDDIAFP---IRHYVER--KGIHFIA-QSAEQIDAEA------QNITLADGNTVHYDY 103 (437)
T ss_dssp ---------------------CHHHHEEE---CHHHHHT--TTCEEEC-SCEEEEETTT------TEEEETTSCEEECSE
T ss_pred ---------------------CHHHHHHH---HHHHHHH--CCCEEEE-eEEEEEEcCC------CEEEECCCCEEECCE
Confidence 00000011 1122222 2778764 6899987653 246778888899999
Q ss_pred EEecCCCchhhhh
Q 044609 158 LIGCDGVHSMVAQ 170 (232)
Q Consensus 158 vV~A~G~~S~~r~ 170 (232)
||+|+|..+....
T Consensus 104 lviAtG~~~~~~~ 116 (437)
T 3sx6_A 104 LMIATGPKLAFEN 116 (437)
T ss_dssp EEECCCCEECGGG
T ss_pred EEECCCCCcCccc
Confidence 9999999765443
No 123
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=99.22 E-value=1.9e-11 Score=100.27 Aligned_cols=37 Identities=35% Similarity=0.564 Sum_probs=34.2
Q ss_pred ccccEEEECCCHHHHHHHHHHHhCCCcEEEEecCCCC
Q 044609 4 VEEDVVIIGAGIAGLATAVALRRLGIKALVLEKSDGL 40 (232)
Q Consensus 4 ~~~dV~IvG~G~~G~~~A~~L~~~g~~v~viE~~~~~ 40 (232)
+++||+|||||++|+++|..|++.|++|+|||+.+..
T Consensus 5 ~~~dVvIIGaG~aGl~aA~~l~~~G~~V~liE~~~~~ 41 (482)
T 1ojt_A 5 AEYDVVVLGGGPGGYSAAFAAADEGLKVAIVERYKTL 41 (482)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSCS
T ss_pred CcCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCC
Confidence 4689999999999999999999999999999997655
No 124
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=99.21 E-value=1.8e-11 Score=100.10 Aligned_cols=38 Identities=42% Similarity=0.631 Sum_probs=34.8
Q ss_pred ccccEEEECCCHHHHHHHHHHHhCCCcEEEEecCCCCc
Q 044609 4 VEEDVVIIGAGIAGLATAVALRRLGIKALVLEKSDGLR 41 (232)
Q Consensus 4 ~~~dV~IvG~G~~G~~~A~~L~~~g~~v~viE~~~~~~ 41 (232)
.++||+|||||++|+++|..|++.|++|+|||+.+.++
T Consensus 5 ~~~dvvIIGaG~aGl~aA~~l~~~g~~V~liE~~~~~G 42 (470)
T 1dxl_A 5 DENDVVIIGGGPGGYVAAIKAAQLGFKTTCIEKRGALG 42 (470)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHHTCCEEEEECSSSSC
T ss_pred ccCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCcc
Confidence 45899999999999999999999999999999987653
No 125
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=99.21 E-value=3.7e-11 Score=97.66 Aligned_cols=109 Identities=17% Similarity=0.232 Sum_probs=67.5
Q ss_pred cccEEEECCCHHHHHHHHHHHhC--CCcEEEEecCCCCcCcceeeeecccHHHHHHHcCChHHHHhhccCceeeEEEEcC
Q 044609 5 EEDVVIIGAGIAGLATAVALRRL--GIKALVLEKSDGLRATGAALTLSPNAWLALDALGVSHKLTSVYAPAKRVFVTNLG 82 (232)
Q Consensus 5 ~~dV~IvG~G~~G~~~A~~L~~~--g~~v~viE~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~ 82 (232)
.+||+|||||++|+++|..|++. +.+|+|||+.+.......+ +.. . .
T Consensus 3 ~~~VvIIGgG~aGl~aA~~L~~~~~~~~V~vie~~~~~~~~~~~---------------~p~--------------~--~ 51 (449)
T 3kd9_A 3 LKKVVIIGGGAAGMSAASRVKRLKPEWDVKVFEATEWVSHAPCG---------------IPY--------------V--V 51 (449)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSSCCC-----------------------------------------
T ss_pred cCcEEEECCcHHHHHHHHHHHHhCcCCCEEEEECCCccccCCcC---------------Ccc--------------c--c
Confidence 46999999999999999999997 8899999998754211100 000 0 0
Q ss_pred CCceeEEeccCCCCCCCCceeeeehHHHHHHHhhhCCCCeEEeCceEEEEEecCCCCCccEEEEeCCC-cEEEccEEEec
Q 044609 83 TGATQELSYAGKSGRIGSGLRSVHRQSLLEALADELPDDTIQFSSKIAAIDSQTLNGSSAAIINLGDS-TIIKAKVLIGC 161 (232)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~i~~~~~v~~i~~~~~~g~~~~~v~~~~g-~~~~a~~vV~A 161 (232)
.+. .... . +. ....+.+.+. .+++++.+++|+++..+. ..+.+.++ .++.+|.||+|
T Consensus 52 ~~~---~~~~--------~---~~-~~~~~~~~~~-~gi~v~~~~~v~~i~~~~------~~v~~~~g~~~~~~d~lviA 109 (449)
T 3kd9_A 52 EGL---STPD--------K---LM-YYPPEVFIKK-RGIDLHLNAEVIEVDTGY------VRVRENGGEKSYEWDYLVFA 109 (449)
T ss_dssp -----------------------------CTHHHH-TTCEEETTCEEEEECSSE------EEEECSSSEEEEECSEEEEC
T ss_pred CCC---CCHH--------H---hh-hcCHHHHHHh-cCcEEEecCEEEEEecCC------CEEEECCceEEEEcCEEEEC
Confidence 000 0000 0 00 0001122222 278999999999986442 55667777 48999999999
Q ss_pred CCCch
Q 044609 162 DGVHS 166 (232)
Q Consensus 162 ~G~~S 166 (232)
+|...
T Consensus 110 tG~~p 114 (449)
T 3kd9_A 110 NGASP 114 (449)
T ss_dssp CCEEE
T ss_pred CCCCC
Confidence 99754
No 126
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=99.20 E-value=1.8e-11 Score=98.55 Aligned_cols=110 Identities=25% Similarity=0.377 Sum_probs=71.6
Q ss_pred ccccEEEECCCHHHHHHHHHHHhCCCc--EEEEecCCCCcCcceeeeecccHHHHHHHcCChHHHHhhccCceeeEEEEc
Q 044609 4 VEEDVVIIGAGIAGLATAVALRRLGIK--ALVLEKSDGLRATGAALTLSPNAWLALDALGVSHKLTSVYAPAKRVFVTNL 81 (232)
Q Consensus 4 ~~~dV~IvG~G~~G~~~A~~L~~~g~~--v~viE~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~ 81 (232)
+.+||+|||||++|+++|..|++.|.+ |+|||+.+...... + .+.. ...
T Consensus 8 ~~~~vvIIGaG~aGl~aA~~L~~~g~~~~V~lie~~~~~~y~~------~---------~l~~----~~~---------- 58 (415)
T 3lxd_A 8 ERADVVIVGAGHGGAQAAIALRQNGFEGRVLVIGREPEIPYER------P---------PLSK----EYL---------- 58 (415)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCSCEEEEESSSSCCBCS------G---------GGGT----TTT----------
T ss_pred CCCcEEEECChHHHHHHHHHHHccCcCCCEEEEecCCCCCcCc------c---------cCCH----HHH----------
Confidence 458999999999999999999999987 99999987542110 0 0000 000
Q ss_pred CCCceeEEeccCCCCCCCCceeeeehHHHHHHHhhhCCCCeEEeCceEEEEEecCCCCCccEEEEeCCCcEEEccEEEec
Q 044609 82 GTGATQELSYAGKSGRIGSGLRSVHRQSLLEALADELPDDTIQFSSKIAAIDSQTLNGSSAAIINLGDSTIIKAKVLIGC 161 (232)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~i~~~~~v~~i~~~~~~g~~~~~v~~~~g~~~~a~~vV~A 161 (232)
.+. . ......... .+.+.+ .+++++.+++|+.+..+. ..|.+.+|+++.+|.||+|
T Consensus 59 -~~~---~---------~~~~~~~~~---~~~~~~--~~i~~~~~~~v~~id~~~------~~v~~~~g~~~~~d~lvlA 114 (415)
T 3lxd_A 59 -ARE---K---------TFERICIRP---AQFWED--KAVEMKLGAEVVSLDPAA------HTVKLGDGSAIEYGKLIWA 114 (415)
T ss_dssp -TTS---S---------CSGGGBSSC---HHHHHH--TTEEEEETCCEEEEETTT------TEEEETTSCEEEEEEEEEC
T ss_pred -cCC---C---------CHHHhccCC---HHHHHH--CCcEEEeCCEEEEEECCC------CEEEECCCCEEEeeEEEEc
Confidence 000 0 000001111 122222 278999999999997653 3467788989999999999
Q ss_pred CCCch
Q 044609 162 DGVHS 166 (232)
Q Consensus 162 ~G~~S 166 (232)
+|...
T Consensus 115 tG~~~ 119 (415)
T 3lxd_A 115 TGGDP 119 (415)
T ss_dssp CCEEC
T ss_pred cCCcc
Confidence 99654
No 127
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=99.17 E-value=2.5e-10 Score=93.77 Aligned_cols=54 Identities=17% Similarity=0.272 Sum_probs=42.1
Q ss_pred HHHHHHHhhhCCCCeEEeCceEEEEEecCCCCCccEEEEeCCC---cEEEccEEEecCCCc
Q 044609 108 QSLLEALADELPDDTIQFSSKIAAIDSQTLNGSSAAIINLGDS---TIIKAKVLIGCDGVH 165 (232)
Q Consensus 108 ~~l~~~l~~~~~~~~i~~~~~v~~i~~~~~~g~~~~~v~~~~g---~~~~a~~vV~A~G~~ 165 (232)
..+.+.|.+.+...+++++++|++|..++ .. +.|.+.+| +++.||.||.|....
T Consensus 239 ~~l~~~l~~~l~~~~i~~~~~V~~i~~~~---~~-v~v~~~~g~~~~~~~ad~vI~a~p~~ 295 (489)
T 2jae_A 239 DRIYYAFQDRIGTDNIVFGAEVTSMKNVS---EG-VTVEYTAGGSKKSITADYAICTIPPH 295 (489)
T ss_dssp THHHHHHHHHHCGGGEETTCEEEEEEEET---TE-EEEEEEETTEEEEEEESEEEECSCHH
T ss_pred HHHHHHHHHhcCCCeEEECCEEEEEEEcC---Ce-EEEEEecCCeEEEEECCEEEECCCHH
Confidence 45777777766447899999999998864 34 77877776 579999999999765
No 128
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=99.16 E-value=9.2e-11 Score=95.91 Aligned_cols=36 Identities=25% Similarity=0.426 Sum_probs=30.9
Q ss_pred cccEEEECCCHHHHHHHHHHHhC--CCcEEEEecCCCC
Q 044609 5 EEDVVIIGAGIAGLATAVALRRL--GIKALVLEKSDGL 40 (232)
Q Consensus 5 ~~dV~IvG~G~~G~~~A~~L~~~--g~~v~viE~~~~~ 40 (232)
.+||+|||||++|+++|..|++. |.+|+|||+.+..
T Consensus 3 ~~~VvIIGaG~aGl~aA~~L~~~~~g~~Vtvie~~~~~ 40 (472)
T 3iwa_A 3 LKHVVVIGAVALGPKAACRFKRLDPEAHVTMIDQASRI 40 (472)
T ss_dssp -CEEEEECCSSHHHHHHHHHHHHCTTSEEEEECCC---
T ss_pred CCcEEEECCCHHHHHHHHHHHhhCcCCCEEEEECCCcc
Confidence 46999999999999999999998 9999999998765
No 129
>4gut_A Lysine-specific histone demethylase 1B; histone demethylase; HET: FAD PGE; 2.00A {Homo sapiens} PDB: 4gur_A* 4gus_A* 4guu_A* 4fwe_A* 4fwf_A* 4fwj_A* 4gu1_A*
Probab=99.16 E-value=1.4e-10 Score=99.64 Aligned_cols=51 Identities=22% Similarity=0.231 Sum_probs=40.8
Q ss_pred HHHHHHHhhhCCCCeEEeCceEEEEEecCCCCCccEEEEeCCCcEEEccEEEecCCCc
Q 044609 108 QSLLEALADELPDDTIQFSSKIAAIDSQTLNGSSAAIINLGDSTIIKAKVLIGCDGVH 165 (232)
Q Consensus 108 ~~l~~~l~~~~~~~~i~~~~~v~~i~~~~~~g~~~~~v~~~~g~~~~a~~vV~A~G~~ 165 (232)
..+.+.|.+ +++|+++++|++|..++ .. +.|++.+|+++.||.||+|....
T Consensus 534 ~~l~~aLa~---gl~I~l~t~V~~I~~~~---~~-v~V~~~~G~~i~Ad~VIvA~P~~ 584 (776)
T 4gut_A 534 SVIIEKLAE---GLDIQLKSPVQCIDYSG---DE-VQVTTTDGTGYSAQKVLVTVPLA 584 (776)
T ss_dssp HHHHHHHHT---TSCEESSCCEEEEECSS---SS-EEEEETTCCEEEESEEEECCCHH
T ss_pred HHHHHHHHh---CCcEEcCCeeEEEEEcC---CE-EEEEECCCcEEEcCEEEECCCHH
Confidence 355566654 67899999999998764 44 78889999899999999999653
No 130
>3p1w_A Rabgdi protein; GDI RAB, malaria, structural genomics consortium, SGC, trans PF10_0345, protein transport; 1.85A {Plasmodium falciparum 3D7}
Probab=99.15 E-value=3.9e-10 Score=91.45 Aligned_cols=55 Identities=11% Similarity=0.047 Sum_probs=40.6
Q ss_pred HHHHHHhhhCC--CCeEEeCceEEEEEecCCCCCccEEEEeCCCcEEEccEEEecCCCc
Q 044609 109 SLLEALADELP--DDTIQFSSKIAAIDSQTLNGSSAAIINLGDSTIIKAKVLIGCDGVH 165 (232)
Q Consensus 109 ~l~~~l~~~~~--~~~i~~~~~v~~i~~~~~~g~~~~~v~~~~g~~~~a~~vV~A~G~~ 165 (232)
.+.+.|.+.+. |++++++++|++|..+++ +.. +.|.+.+|+++.||.||.|.|..
T Consensus 257 ~L~~aL~r~~~~~Gg~i~l~t~V~~I~~d~~-g~v-~gV~~~~G~~i~Ad~VI~a~~~~ 313 (475)
T 3p1w_A 257 GIPEGFSRMCAINGGTFMLNKNVVDFVFDDD-NKV-CGIKSSDGEIAYCDKVICDPSYV 313 (475)
T ss_dssp HHHHHHHHHHHHC--CEESSCCEEEEEECTT-SCE-EEEEETTSCEEEEEEEEECGGGC
T ss_pred HHHHHHHHHHHHcCCEEEeCCeEEEEEEecC-CeE-EEEEECCCcEEECCEEEECCCcc
Confidence 34444444433 789999999999998332 454 78889999999999999999887
No 131
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=99.15 E-value=4.8e-11 Score=98.05 Aligned_cols=38 Identities=34% Similarity=0.610 Sum_probs=33.4
Q ss_pred cccccEEEECCCHHHHHHHHHHHhCCCcEEEEecCCCC
Q 044609 3 MVEEDVVIIGAGIAGLATAVALRRLGIKALVLEKSDGL 40 (232)
Q Consensus 3 ~~~~dV~IvG~G~~G~~~A~~L~~~g~~v~viE~~~~~ 40 (232)
|+++||+|||||++|+++|..|++.|++|+||||.+.+
T Consensus 23 m~~~dVvVIGgG~aGl~aA~~la~~G~~V~liEk~~~~ 60 (491)
T 3urh_A 23 MMAYDLIVIGSGPGGYVCAIKAAQLGMKVAVVEKRSTY 60 (491)
T ss_dssp ---CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSS
T ss_pred cccCCEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCC
Confidence 46799999999999999999999999999999997665
No 132
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=99.14 E-value=1.2e-10 Score=93.51 Aligned_cols=107 Identities=23% Similarity=0.325 Sum_probs=70.5
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCc--EEEEecCCCCcCcceeeeecccHHHHHHHcCChHHHHhhccCceeeEEEEcCC
Q 044609 6 EDVVIIGAGIAGLATAVALRRLGIK--ALVLEKSDGLRATGAALTLSPNAWLALDALGVSHKLTSVYAPAKRVFVTNLGT 83 (232)
Q Consensus 6 ~dV~IvG~G~~G~~~A~~L~~~g~~--v~viE~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~ 83 (232)
.+|+|||||++|+++|..|++.|.+ |+|||+.+...... +. +...+......
T Consensus 3 ~~vvIIGaG~AGl~aA~~L~~~g~~~~V~li~~~~~~~y~~------~~---------l~~~~~~g~~~----------- 56 (410)
T 3ef6_A 3 THVAIIGNGVGGFTTAQALRAEGFEGRISLIGDEPHLPYDR------PS---------LSKAVLDGSLE----------- 56 (410)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEEECSSSSSBCS------GG---------GGTHHHHTSSS-----------
T ss_pred CCEEEEcccHHHHHHHHHHHccCcCCeEEEEECCCCCCcCC------cc---------ccHHHhCCCCC-----------
Confidence 4899999999999999999999987 99999987542110 00 00000000000
Q ss_pred CceeEEeccCCCCCCCCceeeeehHHHHHHHhhhCCCCeEEeCceEEEEEecCCCCCccEEEEeCCCcEEEccEEEecCC
Q 044609 84 GATQELSYAGKSGRIGSGLRSVHRQSLLEALADELPDDTIQFSSKIAAIDSQTLNGSSAAIINLGDSTIIKAKVLIGCDG 163 (232)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~i~~~~~v~~i~~~~~~g~~~~~v~~~~g~~~~a~~vV~A~G 163 (232)
.... ... .+.+.+. +++++.+++|+.+..+. ..|.+.+|+++.+|.||+|+|
T Consensus 57 ----------------~~~~-~~~---~~~~~~~--~i~~~~~~~v~~id~~~------~~v~~~~g~~~~~d~lvlAtG 108 (410)
T 3ef6_A 57 ----------------RPPI-LAE---ADWYGEA--RIDMLTGPEVTALDVQT------RTISLDDGTTLSADAIVIATG 108 (410)
T ss_dssp ----------------SCCB-SSC---TTHHHHT--TCEEEESCCEEEEETTT------TEEEETTSCEEECSEEEECCC
T ss_pred ----------------HHHh-cCC---HHHHHHC--CCEEEeCCEEEEEECCC------CEEEECCCCEEECCEEEEccC
Confidence 0000 000 1122222 78999999999997653 346778898999999999999
Q ss_pred Cch
Q 044609 164 VHS 166 (232)
Q Consensus 164 ~~S 166 (232)
...
T Consensus 109 ~~p 111 (410)
T 3ef6_A 109 SRA 111 (410)
T ss_dssp EEE
T ss_pred Ccc
Confidence 764
No 133
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=99.12 E-value=6.9e-11 Score=96.12 Aligned_cols=111 Identities=18% Similarity=0.226 Sum_probs=69.3
Q ss_pred ccEEEECCCHHHHHHHHHHHhC--CCcEEEEecCCCCcCcceeeeecccHHHHHHHcCChHHHHhhccCceeeEEEEcCC
Q 044609 6 EDVVIIGAGIAGLATAVALRRL--GIKALVLEKSDGLRATGAALTLSPNAWLALDALGVSHKLTSVYAPAKRVFVTNLGT 83 (232)
Q Consensus 6 ~dV~IvG~G~~G~~~A~~L~~~--g~~v~viE~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~ 83 (232)
+||+|||||++|+++|..|++. |.+|+|||+.+..+....++... ..
T Consensus 3 ~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~~~g~~~~~~~~~-------------------------------~~ 51 (452)
T 3oc4_A 3 LKIVIIGASFAGISAAIASRKKYPQAEISLIDKQATVGYLSGGLSAY-------------------------------FN 51 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSSCCSSCCC--------------------------------------
T ss_pred CCEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCcccCccchhh-------------------------------hc
Confidence 5999999999999999999998 89999999988653211110000 00
Q ss_pred CceeEEeccCCCCCCCCceeeeehHHHHHHHhhhCCCCeEEeCceEEEEEecCCCCCccEEEEe-CCCcEEEccEEEecC
Q 044609 84 GATQELSYAGKSGRIGSGLRSVHRQSLLEALADELPDDTIQFSSKIAAIDSQTLNGSSAAIINL-GDSTIIKAKVLIGCD 162 (232)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~i~~~~~v~~i~~~~~~g~~~~~v~~-~~g~~~~a~~vV~A~ 162 (232)
+... ... ...... .+.+.+. +++++++++|+++..++ .. +.+.. .++.++.+|.||+|+
T Consensus 52 ~~~~--~~~--------~~~~~~----~~~~~~~--gi~~~~~~~V~~id~~~---~~-v~v~~~~~~~~~~~d~lviAt 111 (452)
T 3oc4_A 52 HTIN--ELH--------EARYIT----EEELRRQ--KIQLLLNREVVAMDVEN---QL-IAWTRKEEQQWYSYDKLILAT 111 (452)
T ss_dssp -------------------CCCC----HHHHHHT--TEEEECSCEEEEEETTT---TE-EEEEETTEEEEEECSEEEECC
T ss_pred CCCC--CHH--------HhhcCC----HHHHHHC--CCEEEECCEEEEEECCC---CE-EEEEecCceEEEEcCEEEECC
Confidence 0000 000 000001 1222222 78889999999998763 33 55542 345689999999999
Q ss_pred CCchh
Q 044609 163 GVHSM 167 (232)
Q Consensus 163 G~~S~ 167 (232)
|....
T Consensus 112 G~~p~ 116 (452)
T 3oc4_A 112 GASQF 116 (452)
T ss_dssp CCCBC
T ss_pred CcccC
Confidence 98653
No 134
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=99.11 E-value=3.3e-10 Score=90.16 Aligned_cols=108 Identities=19% Similarity=0.165 Sum_probs=71.8
Q ss_pred cccEEEECCCHHHHHHHHHHHhCCCcEEEEecCCCCcCcceeeeecccHHHHHHHcCChHHHHhhccCceeeEEEEcCCC
Q 044609 5 EEDVVIIGAGIAGLATAVALRRLGIKALVLEKSDGLRATGAALTLSPNAWLALDALGVSHKLTSVYAPAKRVFVTNLGTG 84 (232)
Q Consensus 5 ~~dV~IvG~G~~G~~~A~~L~~~g~~v~viE~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~ 84 (232)
+.+|+|||||++|+++|..|.+.+.+|+|||+.+...... +.....+ ....
T Consensus 9 ~~~~vIvGgG~AGl~aA~~L~~~~~~itlie~~~~~~y~~------~~l~~~l----------~g~~------------- 59 (385)
T 3klj_A 9 STKILILGAGPAGFSAAKAALGKCDDITMINSEKYLPYYR------PRLNEII----------AKNK------------- 59 (385)
T ss_dssp BCSEEEECCSHHHHHHHHHHTTTCSCEEEECSSSSCCBCG------GGHHHHH----------HSCC-------------
T ss_pred CCCEEEEcCcHHHHHHHHHHhCCCCEEEEEECCCCCCccc------ChhhHHH----------cCCC-------------
Confidence 4799999999999999999977899999999987642110 1000000 0000
Q ss_pred ceeEEeccCCCCCCCCceeeeehHHHHHHHhhhCCCCeEEeCceEEEEEecCCCCCccEEEEeCCCcEEEccEEEecCCC
Q 044609 85 ATQELSYAGKSGRIGSGLRSVHRQSLLEALADELPDDTIQFSSKIAAIDSQTLNGSSAAIINLGDSTIIKAKVLIGCDGV 164 (232)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~i~~~~~v~~i~~~~~~g~~~~~v~~~~g~~~~a~~vV~A~G~ 164 (232)
+.. ...... .+.+.+. +++++++++|+++..++ ..|++.+|+++.+|.||+|+|.
T Consensus 60 -----~~~---------~l~~~~---~~~~~~~--~i~~~~~~~V~~id~~~------~~v~~~~g~~~~yd~lvlAtG~ 114 (385)
T 3klj_A 60 -----SID---------DILIKK---NDWYEKN--NIKVITSEFATSIDPNN------KLVTLKSGEKIKYEKLIIASGS 114 (385)
T ss_dssp -----CGG---------GTBSSC---HHHHHHT--TCEEECSCCEEEEETTT------TEEEETTSCEEECSEEEECCCE
T ss_pred -----CHH---------HccCCC---HHHHHHC--CCEEEeCCEEEEEECCC------CEEEECCCCEEECCEEEEecCC
Confidence 000 000111 1222222 78999999999997653 3467789999999999999997
Q ss_pred ch
Q 044609 165 HS 166 (232)
Q Consensus 165 ~S 166 (232)
..
T Consensus 115 ~p 116 (385)
T 3klj_A 115 IA 116 (385)
T ss_dssp EE
T ss_pred Cc
Confidence 54
No 135
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=99.11 E-value=1e-10 Score=95.76 Aligned_cols=38 Identities=34% Similarity=0.669 Sum_probs=34.9
Q ss_pred cccccEEEECCCHHHHHHHHHHHhCCCcEEEEecCCCC
Q 044609 3 MVEEDVVIIGAGIAGLATAVALRRLGIKALVLEKSDGL 40 (232)
Q Consensus 3 ~~~~dV~IvG~G~~G~~~A~~L~~~g~~v~viE~~~~~ 40 (232)
++++||+|||||++|+++|..|++.|++|+|||+.+.+
T Consensus 4 ~~~~dvvIIGgG~aGl~aA~~l~~~g~~V~liE~~~~~ 41 (474)
T 1zmd_A 4 PIDADVTVIGSGPGGYVAAIKAAQLGFKTVCIEKNETL 41 (474)
T ss_dssp CEEEEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSS
T ss_pred CCCCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCc
Confidence 35689999999999999999999999999999998765
No 136
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=99.11 E-value=2.1e-10 Score=93.65 Aligned_cols=36 Identities=36% Similarity=0.616 Sum_probs=33.8
Q ss_pred cccEEEECCCHHHHHHHHHHHhCCCcEEEEecCCCC
Q 044609 5 EEDVVIIGAGIAGLATAVALRRLGIKALVLEKSDGL 40 (232)
Q Consensus 5 ~~dV~IvG~G~~G~~~A~~L~~~g~~v~viE~~~~~ 40 (232)
++||+|||||++|+++|..|++.|++|+|||+.+.+
T Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~~~~ 37 (468)
T 2qae_A 2 PYDVVVIGGGPGGYVASIKAAQLGMKTACVEKRGAL 37 (468)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSS
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCc
Confidence 589999999999999999999999999999998665
No 137
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=99.11 E-value=2.4e-10 Score=93.07 Aligned_cols=34 Identities=32% Similarity=0.643 Sum_probs=32.4
Q ss_pred ccccEEEECCCHHHHHHHHHHHhCCCcEEEEecC
Q 044609 4 VEEDVVIIGAGIAGLATAVALRRLGIKALVLEKS 37 (232)
Q Consensus 4 ~~~dV~IvG~G~~G~~~A~~L~~~g~~v~viE~~ 37 (232)
+++||+|||||++|+++|..|++.|++|+|||+.
T Consensus 2 ~~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~ 35 (455)
T 1ebd_A 2 IETETLVVGAGPGGYVAAIRAAQLGQKVTIVEKG 35 (455)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred CcCCEEEECCCHHHHHHHHHHHhCCCeEEEEECC
Confidence 4589999999999999999999999999999997
No 138
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=99.10 E-value=3.4e-10 Score=90.88 Aligned_cols=108 Identities=19% Similarity=0.261 Sum_probs=70.6
Q ss_pred ccccEEEECCCHHHHHHHHHHHhCCC--cEEEEecCCCCcCcceeeeecccHHHHHHHcCChHHHHhhccCceeeEEEEc
Q 044609 4 VEEDVVIIGAGIAGLATAVALRRLGI--KALVLEKSDGLRATGAALTLSPNAWLALDALGVSHKLTSVYAPAKRVFVTNL 81 (232)
Q Consensus 4 ~~~dV~IvG~G~~G~~~A~~L~~~g~--~v~viE~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~ 81 (232)
+++||+|||||++|+++|..|++.|. +|+|||+.+...... +. +...+..... .
T Consensus 6 ~~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~lie~~~~~~~~~------~~---------~~~~~~~~~~-~-------- 61 (408)
T 2gqw_A 6 LKAPVVVLGAGLASVSFVAELRQAGYQGLITVVGDEAERPYDR------PP---------LSKDFMAHGD-A-------- 61 (408)
T ss_dssp CCSSEEEECCSHHHHHHHHHHHHHTCCSCEEEEESSCSCCBCS------GG---------GGTHHHHHCC-G--------
T ss_pred CCCcEEEECChHHHHHHHHHHHccCCCCeEEEEECCCCCcccC------CC---------CCHHHhCCCc-h--------
Confidence 45899999999999999999999988 599999986532110 00 0000000000 0
Q ss_pred CCCceeEEeccCCCCCCCCceeeeehHHHHHHHhhhCCCCeEEeCceEEEEEecCCCCCccEEEEeCCCcEEEccEEEec
Q 044609 82 GTGATQELSYAGKSGRIGSGLRSVHRQSLLEALADELPDDTIQFSSKIAAIDSQTLNGSSAAIINLGDSTIIKAKVLIGC 161 (232)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~i~~~~~v~~i~~~~~~g~~~~~v~~~~g~~~~a~~vV~A 161 (232)
. . ..+. ..+. .+++++.+++|+++..+. ..|.+.+|+++.+|.||+|
T Consensus 62 ----------~------~---~~~~-------~~~~-~~v~~~~~~~v~~i~~~~------~~v~~~~g~~~~~d~lviA 108 (408)
T 2gqw_A 62 ----------E------K---IRLD-------CKRA-PEVEWLLGVTAQSFDPQA------HTVALSDGRTLPYGTLVLA 108 (408)
T ss_dssp ----------G------G---SBCC-------CTTS-CSCEEEETCCEEEEETTT------TEEEETTSCEEECSEEEEC
T ss_pred ----------h------h---hhHH-------HHHH-CCCEEEcCCEEEEEECCC------CEEEECCCCEEECCEEEEC
Confidence 0 0 0010 1111 278999999999987642 3466778888999999999
Q ss_pred CCCchhh
Q 044609 162 DGVHSMV 168 (232)
Q Consensus 162 ~G~~S~~ 168 (232)
+|.....
T Consensus 109 tG~~~~~ 115 (408)
T 2gqw_A 109 TGAAPRA 115 (408)
T ss_dssp CCEEECC
T ss_pred CCCCCCC
Confidence 9986543
No 139
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=99.10 E-value=8.9e-11 Score=94.27 Aligned_cols=32 Identities=28% Similarity=0.469 Sum_probs=30.9
Q ss_pred cEEEECCCHHHHHHHHHHHh---CCCcEEEEecCC
Q 044609 7 DVVIIGAGIAGLATAVALRR---LGIKALVLEKSD 38 (232)
Q Consensus 7 dV~IvG~G~~G~~~A~~L~~---~g~~v~viE~~~ 38 (232)
||+|||||++|+++|..|++ .|++|+|||+++
T Consensus 3 ~VvIIGgG~aGl~aA~~L~~~~~~g~~V~vie~~~ 37 (409)
T 3h8l_A 3 KVLVLGGRFGALTAAYTLKRLVGSKADVKVINKSR 37 (409)
T ss_dssp EEEEECSSHHHHHHHHHHHHHHGGGSEEEEEESSS
T ss_pred eEEEECCCHHHHHHHHHHHhhCCCCCeEEEEeCCC
Confidence 79999999999999999999 899999999987
No 140
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=99.09 E-value=6.3e-11 Score=97.31 Aligned_cols=113 Identities=18% Similarity=0.196 Sum_probs=70.7
Q ss_pred ccccEEEECCCHHHHHHHHHHHhCC---CcEEEEecCCCCcCcceeeeecccHHHHHHHcCChHHHHhhccCceeeEEEE
Q 044609 4 VEEDVVIIGAGIAGLATAVALRRLG---IKALVLEKSDGLRATGAALTLSPNAWLALDALGVSHKLTSVYAPAKRVFVTN 80 (232)
Q Consensus 4 ~~~dV~IvG~G~~G~~~A~~L~~~g---~~v~viE~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~ 80 (232)
|++||+|||||++|+++|..|++.| .+|+|||+.+.....+++ ... .+ .....
T Consensus 34 m~~dvvIIGaG~aGl~aA~~l~~~g~~~~~V~lie~~~~~~~~~~~-------~~~--~~------~~~~~--------- 89 (490)
T 2bc0_A 34 WGSKIVVVGANHAGTACIKTMLTNYGDANEIVVFDQNSNISFLGAG-------MAL--WI------GEQIA--------- 89 (490)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHHGGGSEEEEECSSSCCSBCGGG-------HHH--HH------TTSSS---------
T ss_pred cCCcEEEECCCHHHHHHHHHHHhcCCCCCeEEEEECCCCCCccccc-------cch--hh------cCccC---------
Confidence 4589999999999999999999988 999999998754322111 100 00 00000
Q ss_pred cCCCceeEEeccCCCCCCCCceeeeehHHHHHHHhhhCCCCeEEeCceEEEEEecCCCCCccEEEEeC-CCcEEEccEEE
Q 044609 81 LGTGATQELSYAGKSGRIGSGLRSVHRQSLLEALADELPDDTIQFSSKIAAIDSQTLNGSSAAIINLG-DSTIIKAKVLI 159 (232)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~i~~~~~v~~i~~~~~~g~~~~~v~~~-~g~~~~a~~vV 159 (232)
. ... . .... .+.+.+ .+++++.+++|+.+..++ .. +.+... ++.++.+|.||
T Consensus 90 --~-------~~~--------~-~~~~---~~~~~~--~gv~v~~~~~v~~i~~~~---~~-v~v~~~g~~~~~~~d~lv 142 (490)
T 2bc0_A 90 --G-------PEG--------L-FYSD---KEELES--LGAKVYMESPVQSIDYDA---KT-VTALVDGKNHVETYDKLI 142 (490)
T ss_dssp --C-------SGG--------G-BSCC---HHHHHH--TTCEEETTCCEEEEETTT---TE-EEEEETTEEEEEECSEEE
T ss_pred --C-------HHH--------h-hhcC---HHHHHh--CCCEEEeCCEEEEEECCC---CE-EEEEeCCcEEEEECCEEE
Confidence 0 000 0 0000 122222 278899999999997653 33 555422 23579999999
Q ss_pred ecCCCchh
Q 044609 160 GCDGVHSM 167 (232)
Q Consensus 160 ~A~G~~S~ 167 (232)
+|+|....
T Consensus 143 iAtG~~p~ 150 (490)
T 2bc0_A 143 FATGSQPI 150 (490)
T ss_dssp ECCCEEEC
T ss_pred ECCCCCcC
Confidence 99997654
No 141
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=99.09 E-value=2.8e-11 Score=99.61 Aligned_cols=65 Identities=6% Similarity=0.051 Sum_probs=46.4
Q ss_pred eeehHHHHHHHhhhCC--CCeEEeCceEEEEEecCCCCC----ccEEEEeCCC-----cEEEccEEEecCCCchhh
Q 044609 104 SVHRQSLLEALADELP--DDTIQFSSKIAAIDSQTLNGS----SAAIINLGDS-----TIIKAKVLIGCDGVHSMV 168 (232)
Q Consensus 104 ~~~~~~l~~~l~~~~~--~~~i~~~~~v~~i~~~~~~g~----~~~~v~~~~g-----~~~~a~~vV~A~G~~S~~ 168 (232)
...|.++.++|...+. +..++++++|+++++.+.++. ..+.|++.++ .++.|+.||+|+|....+
T Consensus 141 ~p~r~E~~~Yl~~~A~~~~~~vrf~~~V~~v~~~~~~~~~~~~~~~~V~~~~~~~g~~~~~~ar~vVlatG~~P~i 216 (501)
T 4b63_A 141 LPARLEFEDYMRWCAQQFSDVVAYGEEVVEVIPGKSDPSSSVVDFFTVRSRNVETGEISARRTRKVVIAIGGTAKM 216 (501)
T ss_dssp CCBHHHHHHHHHHHHHTTGGGEEESEEEEEEEEECSSTTSSCBCEEEEEEEETTTCCEEEEEEEEEEECCCCEECC
T ss_pred CCCHHHHHHHHHHHHHHcCCceEcceEEEeeccccccccccccceEEEEEecCCCceEEEEEeCEEEECcCCCCCC
Confidence 5678888888877654 457999999999987542111 1277776543 368999999999965433
No 142
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=99.07 E-value=1.1e-10 Score=95.05 Aligned_cols=36 Identities=39% Similarity=0.605 Sum_probs=33.5
Q ss_pred cccEEEECCCHHHHHHHHHHHhCCCcEEEEecCCCC
Q 044609 5 EEDVVIIGAGIAGLATAVALRRLGIKALVLEKSDGL 40 (232)
Q Consensus 5 ~~dV~IvG~G~~G~~~A~~L~~~g~~v~viE~~~~~ 40 (232)
++||+|||||++|+++|..|++.|++|+|||+.+.+
T Consensus 1 ~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~ 36 (455)
T 2yqu_A 1 MYDLLVIGAGPGGYVAAIRAAQLGMKVGVVEKEKAL 36 (455)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSS
T ss_pred CCCEEEECCChhHHHHHHHHHHCCCeEEEEeCCCCC
Confidence 379999999999999999999999999999998655
No 143
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=99.06 E-value=4.4e-11 Score=96.65 Aligned_cols=105 Identities=20% Similarity=0.224 Sum_probs=66.9
Q ss_pred ccEEEECCCHHHHHHHHHHHh--CCCcEEEEecCCCCcCcceeeeecccHHHHHHHcCChHHHHhhccCceeeEEEEcCC
Q 044609 6 EDVVIIGAGIAGLATAVALRR--LGIKALVLEKSDGLRATGAALTLSPNAWLALDALGVSHKLTSVYAPAKRVFVTNLGT 83 (232)
Q Consensus 6 ~dV~IvG~G~~G~~~A~~L~~--~g~~v~viE~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~ 83 (232)
+||+|||||++|+++|..|++ .|++|+|||+++..... +..... .........
T Consensus 3 ~~vvIIGgG~aGl~aA~~L~~~~~g~~Vtlie~~~~~~~~-------~~~~~~----------~~g~~~~~~-------- 57 (430)
T 3h28_A 3 KHVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPYFGFT-------PAFPHL----------AMGWRKFED-------- 57 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSSEEECG-------GGHHHH----------HHTCSCGGG--------
T ss_pred CCEEEECccHHHHHHHHHHHcCCCCCeEEEECCCCCCCcC-------CCcchh----------ccCccCHHH--------
Confidence 699999999999999999999 89999999998654211 111000 000000000
Q ss_pred CceeEEeccCCCCCCCCceeeeehHHHHHHHhhhCCCCeEEeCceEEEEEecCCCCCccEEEEeCCCcEEEccEEEecCC
Q 044609 84 GATQELSYAGKSGRIGSGLRSVHRQSLLEALADELPDDTIQFSSKIAAIDSQTLNGSSAAIINLGDSTIIKAKVLIGCDG 163 (232)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~i~~~~~v~~i~~~~~~g~~~~~v~~~~g~~~~a~~vV~A~G 163 (232)
....+ .+.+.+ .+++++.+ +|+.+..+. ..|.+.+++++.+|.||+|+|
T Consensus 58 ---~~~~~-------------------~~~~~~--~gv~~~~~-~v~~id~~~------~~v~~~~g~~i~~d~liiAtG 106 (430)
T 3h28_A 58 ---ISVPL-------------------APLLPK--FNIEFINE-KAESIDPDA------NTVTTQSGKKIEYDYLVIATG 106 (430)
T ss_dssp ---SEEES-------------------TTTGGG--GTEEEECS-CEEEEETTT------TEEEETTCCEEECSEEEECCC
T ss_pred ---HHHHH-------------------HHHHHh--cCCEEEEE-EEEEEECCC------CEEEECCCcEEECCEEEEcCC
Confidence 00000 011111 16777764 888887653 246678888899999999999
Q ss_pred Cch
Q 044609 164 VHS 166 (232)
Q Consensus 164 ~~S 166 (232)
...
T Consensus 107 ~~~ 109 (430)
T 3h28_A 107 PKL 109 (430)
T ss_dssp CEE
T ss_pred ccc
Confidence 864
No 144
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=99.05 E-value=6e-10 Score=93.54 Aligned_cols=114 Identities=18% Similarity=0.264 Sum_probs=72.0
Q ss_pred ccccEEEECCCHHHHHHHHHHHhC--CCcEEEEecCCCCcCcceeeeecccHHHHHHHcCChHHHHhhccCceeeEEEEc
Q 044609 4 VEEDVVIIGAGIAGLATAVALRRL--GIKALVLEKSDGLRATGAALTLSPNAWLALDALGVSHKLTSVYAPAKRVFVTNL 81 (232)
Q Consensus 4 ~~~dV~IvG~G~~G~~~A~~L~~~--g~~v~viE~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~ 81 (232)
+.+||+|||||++|+++|..|++. |.+|+|||+.+...... ..+. ..+.....
T Consensus 35 ~~~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~~~~~~~-------~~lp--------~~~~g~~~---------- 89 (588)
T 3ics_A 35 GSRKIVVVGGVAGGASVAARLRRLSEEDEIIMVERGEYISFAN-------CGLP--------YYIGGVIT---------- 89 (588)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSSCSSBCG-------GGHH--------HHHTTSSC----------
T ss_pred cCCCEEEECCcHHHHHHHHHHHhhCcCCCEEEEECCCCccccC-------CCCc--------hhhcCcCC----------
Confidence 347999999999999999999998 89999999988653111 1110 00000000
Q ss_pred CCCceeEEeccCCCCCCCCceeeeehHHHHHHHhhhCCCCeEEeCceEEEEEecCCCCCccEEEEe-CCCc--EEEccEE
Q 044609 82 GTGATQELSYAGKSGRIGSGLRSVHRQSLLEALADELPDDTIQFSSKIAAIDSQTLNGSSAAIINL-GDST--IIKAKVL 158 (232)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~i~~~~~v~~i~~~~~~g~~~~~v~~-~~g~--~~~a~~v 158 (232)
. .... ... . .+.+.+.. +++++++++|+++..++ .. +.+.. .+|. ++.+|.|
T Consensus 90 --------~--------~~~~-~~~--~-~~~~~~~~-gi~v~~~~~V~~id~~~---~~-v~v~~~~~g~~~~~~~d~l 144 (588)
T 3ics_A 90 --------E--------RQKL-LVQ--T-VERMSKRF-NLDIRVLSEVVKINKEE---KT-ITIKNVTTNETYNEAYDVL 144 (588)
T ss_dssp --------C--------GGGG-BSS--C-HHHHHHHT-TCEEECSEEEEEEETTT---TE-EEEEETTTCCEEEEECSEE
T ss_pred --------C--------hHHh-hcc--C-HHHHHHhc-CcEEEECCEEEEEECCC---CE-EEEeecCCCCEEEEeCCEE
Confidence 0 0000 000 0 22233222 78899999999998763 43 55554 4565 7899999
Q ss_pred EecCCCchh
Q 044609 159 IGCDGVHSM 167 (232)
Q Consensus 159 V~A~G~~S~ 167 (232)
|+|+|....
T Consensus 145 viAtG~~p~ 153 (588)
T 3ics_A 145 ILSPGAKPI 153 (588)
T ss_dssp EECCCEEEC
T ss_pred EECCCCCCC
Confidence 999997543
No 145
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=99.05 E-value=7e-10 Score=90.87 Aligned_cols=112 Identities=17% Similarity=0.176 Sum_probs=71.3
Q ss_pred ccEEEECCCHHHHHHHHHHHhC--CCcEEEEecCCCCcCcceeeeecccHHHHHHHcCChHHHHhhccCceeeEEEEcCC
Q 044609 6 EDVVIIGAGIAGLATAVALRRL--GIKALVLEKSDGLRATGAALTLSPNAWLALDALGVSHKLTSVYAPAKRVFVTNLGT 83 (232)
Q Consensus 6 ~dV~IvG~G~~G~~~A~~L~~~--g~~v~viE~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~ 83 (232)
+||+|||||++|+++|..|++. |.+|+|||+.+......+ .... .+ .. .
T Consensus 37 ~dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~~~~~~~~-------~~~~--------~~-~~-~------------ 87 (480)
T 3cgb_A 37 MNYVIIGGDAAGMSAAMQIVRNDENANVVTLEKGEIYSYAQC-------GLPY--------VI-SG-A------------ 87 (480)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSSSCCSBCGG-------GHHH--------HH-TT-S------------
T ss_pred ceEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCCCCCC-------Ccch--------hh-cC-C------------
Confidence 5999999999999999999996 899999999876532111 0110 00 00 0
Q ss_pred CceeEEeccCCCCCCCCceeeeehHHHHHHHhhhCCCCeEEeCceEEEEEecCCCCCccEEEEe-CCCc--EEEccEEEe
Q 044609 84 GATQELSYAGKSGRIGSGLRSVHRQSLLEALADELPDDTIQFSSKIAAIDSQTLNGSSAAIINL-GDST--IIKAKVLIG 160 (232)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~i~~~~~v~~i~~~~~~g~~~~~v~~-~~g~--~~~a~~vV~ 160 (232)
. .++.... .. ..+.+.+. .+++++.+++|+.+..++ .. +.+.. .+|+ ++.+|.||+
T Consensus 88 --~--~~~~~l~--------~~----~~~~~~~~-~gv~~~~~~~v~~i~~~~---~~-v~v~~~~~g~~~~~~~d~lvi 146 (480)
T 3cgb_A 88 --I--ASTEKLI--------AR----NVKTFRDK-YGIDAKVRHEVTKVDTEK---KI-VYAEHTKTKDVFEFSYDRLLI 146 (480)
T ss_dssp --S--SCGGGGB--------SS----CHHHHHHT-TCCEEESSEEEEEEETTT---TE-EEEEETTTCCEEEEECSEEEE
T ss_pred --c--CCHHHhh--------hc----CHHHHHhh-cCCEEEeCCEEEEEECCC---CE-EEEEEcCCCceEEEEcCEEEE
Confidence 0 0000000 00 02233332 278999999999997653 34 66665 4566 799999999
Q ss_pred cCCCchh
Q 044609 161 CDGVHSM 167 (232)
Q Consensus 161 A~G~~S~ 167 (232)
|+|....
T Consensus 147 AtG~~p~ 153 (480)
T 3cgb_A 147 ATGVRPV 153 (480)
T ss_dssp CCCEEEC
T ss_pred CCCCccc
Confidence 9997654
No 146
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=99.03 E-value=4e-10 Score=92.55 Aligned_cols=110 Identities=20% Similarity=0.260 Sum_probs=73.6
Q ss_pred ccccEEEECCCHHHHHHHHHHHhCCCcEEEEecCCCCcCcceeeeecccHHHHHHHcCChHHHHhhccCceeeEEEEcCC
Q 044609 4 VEEDVVIIGAGIAGLATAVALRRLGIKALVLEKSDGLRATGAALTLSPNAWLALDALGVSHKLTSVYAPAKRVFVTNLGT 83 (232)
Q Consensus 4 ~~~dV~IvG~G~~G~~~A~~L~~~g~~v~viE~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~ 83 (232)
.++||+|||||++|+++|..|++. ++|+|||+.+.++..-. ....
T Consensus 107 ~~~dVvIIGgG~aGl~aA~~L~~~-~~V~vie~~~~~GG~~~----------------------~~~~------------ 151 (493)
T 1y56_A 107 VVVDVAIIGGGPAGIGAALELQQY-LTVALIEERGWLGGDMW----------------------LKGI------------ 151 (493)
T ss_dssp EEESCCEECCSHHHHHHHHHHTTT-CCEEEECTTSSSSCSGG----------------------GTCS------------
T ss_pred ccCCEEEECccHHHHHHHHHHHhc-CCEEEEeCCCCCCCeee----------------------cccc------------
Confidence 357999999999999999999999 99999999876532100 0000
Q ss_pred CceeEEeccCCCCCCCCceeeeehHHHHHHHhhhCC-CCeEEeCceEEEEEecCCCCCccEEEEe-CCCc--EEEccEEE
Q 044609 84 GATQELSYAGKSGRIGSGLRSVHRQSLLEALADELP-DDTIQFSSKIAAIDSQTLNGSSAAIINL-GDST--IIKAKVLI 159 (232)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~-~~~i~~~~~v~~i~~~~~~g~~~~~v~~-~~g~--~~~a~~vV 159 (232)
.. . .... ....+.+.+.+.+. +++++++++|.++..+. .. +.+.. .+++ ++.+|.||
T Consensus 152 ---~~------~---g~~~---~~~~~~~~l~~~l~~~v~~~~~~~v~~i~~~~---~~-~~~~~~~~~~~~~~~~d~lv 212 (493)
T 1y56_A 152 ---KQ------E---GFNK---DSRKVVEELVGKLNENTKIYLETSALGVFDKG---EY-FLVPVVRGDKLIEILAKRVV 212 (493)
T ss_dssp ---EE------T---TTTE---EHHHHHHHHHHTCCTTEEEETTEEECCCEECS---SS-EEEEEEETTEEEEEEESCEE
T ss_pred ---cc------C---CCCC---CHHHHHHHHHHHHhcCCEEEcCCEEEEEEcCC---cE-EEEEEecCCeEEEEECCEEE
Confidence 00 0 0001 33445555555443 78889999999887764 33 43433 4453 68999999
Q ss_pred ecCCCchh
Q 044609 160 GCDGVHSM 167 (232)
Q Consensus 160 ~A~G~~S~ 167 (232)
+|+|....
T Consensus 213 lAtGa~~~ 220 (493)
T 1y56_A 213 LATGAIDS 220 (493)
T ss_dssp ECCCEEEC
T ss_pred ECCCCCcc
Confidence 99998653
No 147
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=99.03 E-value=1.5e-10 Score=94.68 Aligned_cols=37 Identities=38% Similarity=0.625 Sum_probs=34.4
Q ss_pred ccccEEEECCCHHHHHHHHHHHhCCCcEEEEecCCCC
Q 044609 4 VEEDVVIIGAGIAGLATAVALRRLGIKALVLEKSDGL 40 (232)
Q Consensus 4 ~~~dV~IvG~G~~G~~~A~~L~~~g~~v~viE~~~~~ 40 (232)
++|||+|||||++|+++|+.|++.|++|+|||+.+.+
T Consensus 2 ~~~DVvVIGgG~aGl~aA~~la~~G~~V~liEk~~~~ 38 (476)
T 3lad_A 2 QKFDVIVIGAGPGGYVAAIKSAQLGLKTALIEKYKGK 38 (476)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHHTCCEEEEECCBCT
T ss_pred CcCCEEEECcCHHHHHHHHHHHhCCCEEEEEeCCCcc
Confidence 4699999999999999999999999999999998744
No 148
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=99.03 E-value=8.9e-10 Score=89.03 Aligned_cols=104 Identities=22% Similarity=0.284 Sum_probs=65.7
Q ss_pred ccEEEECCCHHHHHHHHHHHhCC--CcEEEEecCCCCcCcceeeeecccHHHHHHHcCChHHHHhhccCceeeEEEEcCC
Q 044609 6 EDVVIIGAGIAGLATAVALRRLG--IKALVLEKSDGLRATGAALTLSPNAWLALDALGVSHKLTSVYAPAKRVFVTNLGT 83 (232)
Q Consensus 6 ~dV~IvG~G~~G~~~A~~L~~~g--~~v~viE~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~ 83 (232)
.+|+|||||++|+++|..|++.+ ++|+|||+++.. .+.|....+.- | ......
T Consensus 3 K~VvIIGgG~aGl~aA~~L~~~~~~~~VtlI~~~~~~-------~~~p~l~~v~~--g--------~~~~~~-------- 57 (430)
T 3hyw_A 3 KHVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPYF-------GFTPAFPHLAM--G--------WRKFED-------- 57 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSSEE-------ECGGGHHHHHH--T--------CSCGGG--------
T ss_pred CcEEEECCCHHHHHHHHHHhccCcCCeEEEEcCCCCC-------ccCccHHHHhc--C--------CCCHHH--------
Confidence 47999999999999999999864 799999987642 11221111100 0 000000
Q ss_pred CceeEEeccCCCCCCCCceeeeehHHHHHHHhhhCCCCeEEeCceEEEEEecCCCCCccEEEEeCCCcEEEccEEEecCC
Q 044609 84 GATQELSYAGKSGRIGSGLRSVHRQSLLEALADELPDDTIQFSSKIAAIDSQTLNGSSAAIINLGDSTIIKAKVLIGCDG 163 (232)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~i~~~~~v~~i~~~~~~g~~~~~v~~~~g~~~~a~~vV~A~G 163 (232)
...++. +.+.+. +++++.+ +|++|..+. -.|++.+|+++.+|+||+|+|
T Consensus 58 ---i~~~~~-------------------~~~~~~--gv~~i~~-~v~~Id~~~------~~V~~~~g~~i~YD~LViAtG 106 (430)
T 3hyw_A 58 ---ISVPLA-------------------PLLPKF--NIEFINE-KAESIDPDA------NTVTTQSGKKIEYDYLVIATG 106 (430)
T ss_dssp ---SEEEST-------------------TTGGGG--TEEEECS-CEEEEETTT------TEEEETTCCEEECSEEEECCC
T ss_pred ---hhhcHH-------------------HHHHHC--CcEEEEe-EEEEEECCC------CEEEECCCCEEECCEEEEeCC
Confidence 001110 111111 6777665 788997653 346789999999999999999
Q ss_pred Cc
Q 044609 164 VH 165 (232)
Q Consensus 164 ~~ 165 (232)
..
T Consensus 107 ~~ 108 (430)
T 3hyw_A 107 PK 108 (430)
T ss_dssp CE
T ss_pred CC
Confidence 75
No 149
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=99.02 E-value=1.9e-09 Score=88.07 Aligned_cols=36 Identities=31% Similarity=0.469 Sum_probs=33.4
Q ss_pred CCcccccEEEECCCHHHHHHHHHHHhCCCcEEEEecC
Q 044609 1 MEMVEEDVVIIGAGIAGLATAVALRRLGIKALVLEKS 37 (232)
Q Consensus 1 m~~~~~dV~IvG~G~~G~~~A~~L~~~g~~v~viE~~ 37 (232)
|+ .++||+|||||++|+++|..|++.|++|+|||++
T Consensus 1 M~-~~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~ 36 (467)
T 1zk7_A 1 ME-PPVQVAVIGSGGAAMAAALKAVEQGAQVTLIERG 36 (467)
T ss_dssp CC-CCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CC-CcCCEEEECCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 54 4689999999999999999999999999999997
No 150
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=99.01 E-value=1.2e-09 Score=86.49 Aligned_cols=105 Identities=17% Similarity=0.206 Sum_probs=67.4
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCcEEEEecCCCCcCcceeeeecccHHHHHHHcCChHHHHhhccCceeeEEEEcCCCc
Q 044609 6 EDVVIIGAGIAGLATAVALRRLGIKALVLEKSDGLRATGAALTLSPNAWLALDALGVSHKLTSVYAPAKRVFVTNLGTGA 85 (232)
Q Consensus 6 ~dV~IvG~G~~G~~~A~~L~~~g~~v~viE~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 85 (232)
.||+|||||++|+++|..|++.| +|+|||+.+...... +. + ..... +.
T Consensus 9 ~~vvIIGgG~AGl~aA~~l~~~g-~V~lie~~~~~~~~~------~~-l---------~~~~~---------------g~ 56 (367)
T 1xhc_A 9 SKVVIVGNGPGGFELAKQLSQTY-EVTVIDKEPVPYYSK------PM-L---------SHYIA---------------GF 56 (367)
T ss_dssp CEEEEECCSHHHHHHHHHHTTTS-EEEEECSSSSCCCCS------TT-H---------HHHHT---------------TS
T ss_pred CcEEEECCcHHHHHHHHHHhhcC-CEEEEECCCCCcccc------ch-h---------HHHHh---------------CC
Confidence 69999999999999999999999 999999987542100 00 0 00000 00
Q ss_pred eeEEeccCCCCCCCCceeeeehHHHHHHHhhhCCCCeEEeCceEEEEEecCCCCCccEEEEeCCCcEEEccEEEecCCCc
Q 044609 86 TQELSYAGKSGRIGSGLRSVHRQSLLEALADELPDDTIQFSSKIAAIDSQTLNGSSAAIINLGDSTIIKAKVLIGCDGVH 165 (232)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~i~~~~~v~~i~~~~~~g~~~~~v~~~~g~~~~a~~vV~A~G~~ 165 (232)
.++.... ... .+.+.+. +++++.+++|+.+..+. ..|. .+|+++.+|.||+|+|..
T Consensus 57 ---~~~~~~~---------~~~---~~~~~~~--~v~~~~g~~v~~id~~~------~~V~-~~g~~~~~d~lViATGs~ 112 (367)
T 1xhc_A 57 ---IPRNRLF---------PYS---LDWYRKR--GIEIRLAEEAKLIDRGR------KVVI-TEKGEVPYDTLVLATGAR 112 (367)
T ss_dssp ---SCGGGGC---------SSC---HHHHHHH--TEEEECSCCEEEEETTT------TEEE-ESSCEEECSEEEECCCEE
T ss_pred ---CCHHHhc---------cCC---HHHHHhC--CcEEEECCEEEEEECCC------CEEE-ECCcEEECCEEEECCCCC
Confidence 0000000 001 1223222 78999999999987542 3344 577889999999999975
Q ss_pred h
Q 044609 166 S 166 (232)
Q Consensus 166 S 166 (232)
.
T Consensus 113 p 113 (367)
T 1xhc_A 113 A 113 (367)
T ss_dssp E
T ss_pred C
Confidence 4
No 151
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=99.01 E-value=2e-10 Score=92.07 Aligned_cols=107 Identities=21% Similarity=0.267 Sum_probs=68.5
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCC--cEEEEecCCCCcCcceeeeecccHHHHHHHcCChHHHHhhccCceeeEEEEcCC
Q 044609 6 EDVVIIGAGIAGLATAVALRRLGI--KALVLEKSDGLRATGAALTLSPNAWLALDALGVSHKLTSVYAPAKRVFVTNLGT 83 (232)
Q Consensus 6 ~dV~IvG~G~~G~~~A~~L~~~g~--~v~viE~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~ 83 (232)
.||+|||||++|+++|..|++.|+ +|+|||+.+...... + .+...+.. .
T Consensus 2 k~vvIIGaG~aGl~aA~~L~~~g~~~~V~lie~~~~~~y~~------~---------~l~~~~l~--------------~ 52 (404)
T 3fg2_P 2 DTVLIAGAGHAGFQVAVSLRQAKYPGRIALINDEKHLPYQR------P---------PLSKAYLK--------------S 52 (404)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCSCEEEECCSSSSSBCS------G---------GGGTGGGG--------------S
T ss_pred CCEEEEcChHHHHHHHHHHHhhCcCCCEEEEeCCCCCCCCC------c---------cCCHHHHC--------------C
Confidence 589999999999999999999998 899999987432110 0 00000000 0
Q ss_pred CceeEEeccCCCCCCCCceeeeehHHHHHHHhhhCCCCeEEeCceEEEEEecCCCCCccEEEEeCCCcEEEccEEEecCC
Q 044609 84 GATQELSYAGKSGRIGSGLRSVHRQSLLEALADELPDDTIQFSSKIAAIDSQTLNGSSAAIINLGDSTIIKAKVLIGCDG 163 (232)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~i~~~~~v~~i~~~~~~g~~~~~v~~~~g~~~~a~~vV~A~G 163 (232)
.. ......... .+.+.+. +++++. ++|+++..+. ..|.+.+|+++.+|.||+|+|
T Consensus 53 ----~~---------~~~~~~~~~---~~~~~~~--~i~~~~-~~v~~id~~~------~~v~~~~g~~~~~d~lvlAtG 107 (404)
T 3fg2_P 53 ----GG---------DPNSLMFRP---EKFFQDQ--AIELIS-DRMVSIDREG------RKLLLASGTAIEYGHLVLATG 107 (404)
T ss_dssp ----CC---------CTTSSBSSC---HHHHHHT--TEEEEC-CCEEEEETTT------TEEEESSSCEEECSEEEECCC
T ss_pred ----CC---------CHHHccCCC---HHHHHhC--CCEEEE-EEEEEEECCC------CEEEECCCCEEECCEEEEeeC
Confidence 00 000001111 1222222 778888 8999997653 346678898999999999999
Q ss_pred Cch
Q 044609 164 VHS 166 (232)
Q Consensus 164 ~~S 166 (232)
...
T Consensus 108 ~~p 110 (404)
T 3fg2_P 108 ARN 110 (404)
T ss_dssp EEE
T ss_pred CCc
Confidence 753
No 152
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=99.01 E-value=6.7e-10 Score=91.42 Aligned_cols=34 Identities=24% Similarity=0.366 Sum_probs=32.5
Q ss_pred cccEEEECCCHHHHHHHHHHHhC---CCcEEEEecCC
Q 044609 5 EEDVVIIGAGIAGLATAVALRRL---GIKALVLEKSD 38 (232)
Q Consensus 5 ~~dV~IvG~G~~G~~~A~~L~~~---g~~v~viE~~~ 38 (232)
++||+|||||++|+++|..|++. |++|+|||+.+
T Consensus 2 ~~dVvIIGgG~aGl~aA~~l~~~~~~G~~V~liE~~~ 38 (499)
T 1xdi_A 2 VTRIVILGGGPAGYEAALVAATSHPETTQVTVIDCDG 38 (499)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHCTTTEEEEEEESSC
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCCcCEEEEEeCCC
Confidence 48999999999999999999998 99999999987
No 153
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=99.00 E-value=2.5e-10 Score=92.86 Aligned_cols=113 Identities=15% Similarity=0.110 Sum_probs=69.8
Q ss_pred ccEEEECCCHHHHHHHHHHHhC--CCcEEEEecCCCCcCcceeeeecccHHHHHHHcCChHHHHhhccCceeeEEEEcCC
Q 044609 6 EDVVIIGAGIAGLATAVALRRL--GIKALVLEKSDGLRATGAALTLSPNAWLALDALGVSHKLTSVYAPAKRVFVTNLGT 83 (232)
Q Consensus 6 ~dV~IvG~G~~G~~~A~~L~~~--g~~v~viE~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~ 83 (232)
+||+|||||++|+++|..|++. |.+|+|||+.+.....++ .... .+ ... ..
T Consensus 1 ~dvvIIGgG~aGl~aA~~l~~~~~g~~V~lie~~~~~~~~~~-------~~~~--~~------~g~---~~--------- 53 (452)
T 2cdu_A 1 MKVIVVGCTHAGTFAVKQTIADHPDADVTAYEMNDNISFLSC-------GIAL--YL------GKE---IK--------- 53 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTCEEEEEESSSCCCBCGG-------GHHH--HH------TTC---BG---------
T ss_pred CeEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCCcccc-------cchh--hh------cCC---cc---------
Confidence 5899999999999999999998 999999999875422211 1110 00 000 00
Q ss_pred CceeEEeccCCCCCCCCceeeeehHHHHHHHhhhCCCCeEEeCceEEEEEecCCCCCccEEEEeC-C--CcEEEccEEEe
Q 044609 84 GATQELSYAGKSGRIGSGLRSVHRQSLLEALADELPDDTIQFSSKIAAIDSQTLNGSSAAIINLG-D--STIIKAKVLIG 160 (232)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~i~~~~~v~~i~~~~~~g~~~~~v~~~-~--g~~~~a~~vV~ 160 (232)
..+.... ... +.+.+.+ .+++++.+++|..+..++ .. +.+... + +.++.+|.||+
T Consensus 54 ----~~~~~~~---------~~~---~~~~~~~--~gv~~~~~~~v~~i~~~~---~~-v~v~~~~~g~~~~~~~d~lvi 111 (452)
T 2cdu_A 54 ----NNDPRGL---------FYS---SPEELSN--LGANVQMRHQVTNVDPET---KT-IKVKDLITNEEKTEAYDKLIM 111 (452)
T ss_dssp ----GGCGGGG---------BSC---CHHHHHH--TTCEEEESEEEEEEEGGG---TE-EEEEETTTCCEEEEECSEEEE
T ss_pred ----cCCHHHh---------hhc---CHHHHHH--cCCEEEeCCEEEEEEcCC---CE-EEEEecCCCceEEEECCEEEE
Confidence 0000000 000 0122222 278999999999997653 33 655542 2 45799999999
Q ss_pred cCCCchh
Q 044609 161 CDGVHSM 167 (232)
Q Consensus 161 A~G~~S~ 167 (232)
|+|....
T Consensus 112 AtGs~p~ 118 (452)
T 2cdu_A 112 TTGSKPT 118 (452)
T ss_dssp CCCEEEC
T ss_pred ccCCCcC
Confidence 9997654
No 154
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=99.00 E-value=3.3e-09 Score=87.71 Aligned_cols=35 Identities=37% Similarity=0.565 Sum_probs=32.8
Q ss_pred ccccEEEECCCHHHHHHHHHHHhCCCcEEEEecCC
Q 044609 4 VEEDVVIIGAGIAGLATAVALRRLGIKALVLEKSD 38 (232)
Q Consensus 4 ~~~dV~IvG~G~~G~~~A~~L~~~g~~v~viE~~~ 38 (232)
.+|||+||||||+|+++|..|++.|++|+|||+.+
T Consensus 31 ~~~DVvVIGgGpaGl~aA~~la~~G~~V~liEk~~ 65 (519)
T 3qfa_A 31 YDYDLIIIGGGSGGLAAAKEAAQYGKKVMVLDFVT 65 (519)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCC
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCeEEEEeccC
Confidence 35899999999999999999999999999999965
No 155
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=98.99 E-value=3.1e-09 Score=84.59 Aligned_cols=101 Identities=15% Similarity=0.244 Sum_probs=75.9
Q ss_pred cccEEEECCCHHHHHHHHHHHhCCCcEEEEecCCCCcCcceeeeecccHHHHHHHcCChHHHHhhccCceeeEEEEcCCC
Q 044609 5 EEDVVIIGAGIAGLATAVALRRLGIKALVLEKSDGLRATGAALTLSPNAWLALDALGVSHKLTSVYAPAKRVFVTNLGTG 84 (232)
Q Consensus 5 ~~dV~IvG~G~~G~~~A~~L~~~g~~v~viE~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~ 84 (232)
..+|+|||+|+.|+.+|..|++.|.+|+++|+.+.+...
T Consensus 145 ~~~v~ViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~----------------------------------------- 183 (384)
T 2v3a_A 145 KRRVLLLGAGLIGCEFANDLSSGGYQLDVVAPCEQVMPG----------------------------------------- 183 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTT-----------------------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCcchhhc-----------------------------------------
Confidence 358999999999999999999999999999987643110
Q ss_pred ceeEEeccCCCCCCCCceeeeehHHHHHHHhhhCCCCeEEeCceEEEEEecCCCCCccEEEEeCCCcEEEccEEEecCCC
Q 044609 85 ATQELSYAGKSGRIGSGLRSVHRQSLLEALADELPDDTIQFSSKIAAIDSQTLNGSSAAIINLGDSTIIKAKVLIGCDGV 164 (232)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~i~~~~~v~~i~~~~~~g~~~~~v~~~~g~~~~a~~vV~A~G~ 164 (232)
.. +. -....+.+.+.+ .+++++++++|+++..++ .. +.+.+.+|+++.||.||.|+|.
T Consensus 184 ---------~~---~~----~~~~~l~~~l~~--~gv~i~~~~~v~~i~~~~---~~-~~v~~~~g~~i~~d~vv~a~G~ 241 (384)
T 2v3a_A 184 ---------LL---HP----AAAKAVQAGLEG--LGVRFHLGPVLASLKKAG---EG-LEAHLSDGEVIPCDLVVSAVGL 241 (384)
T ss_dssp ---------TS---CH----HHHHHHHHHHHT--TTCEEEESCCEEEEEEET---TE-EEEEETTSCEEEESEEEECSCE
T ss_pred ---------cc---CH----HHHHHHHHHHHH--cCCEEEeCCEEEEEEecC---CE-EEEEECCCCEEECCEEEECcCC
Confidence 00 00 012233344443 289999999999998753 34 7788889999999999999998
Q ss_pred chhh
Q 044609 165 HSMV 168 (232)
Q Consensus 165 ~S~~ 168 (232)
.+..
T Consensus 242 ~p~~ 245 (384)
T 2v3a_A 242 RPRT 245 (384)
T ss_dssp EECC
T ss_pred CcCH
Confidence 8753
No 156
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=98.99 E-value=2e-09 Score=87.39 Aligned_cols=111 Identities=14% Similarity=0.120 Sum_probs=69.8
Q ss_pred ccEEEECCCHHHHHHHHHHHhC--CCcEEEEecCCCCcCcceeeeecccHHHHHHHcCChHHHHhhccCceeeEEEEcCC
Q 044609 6 EDVVIIGAGIAGLATAVALRRL--GIKALVLEKSDGLRATGAALTLSPNAWLALDALGVSHKLTSVYAPAKRVFVTNLGT 83 (232)
Q Consensus 6 ~dV~IvG~G~~G~~~A~~L~~~--g~~v~viE~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~ 83 (232)
+||+|||||++|+++|..|++. |.+|+|||+.+.....+ ..... .+ .....
T Consensus 1 ~dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~~~~~~~-------~~~~~--~~------~~~~~------------ 53 (447)
T 1nhp_A 1 MKVIVLGSSHGGYEAVEELLNLHPDAEIQWYEKGDFISFLS-------AGMQL--YL------EGKVK------------ 53 (447)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTSEEEEEESSSSSSBCG-------GGHHH--HH------TTSSC------------
T ss_pred CeEEEECCCHHHHHHHHHHHHhCcCCeEEEEECCCccCccc-------ccchh--hh------cCccC------------
Confidence 3899999999999999999997 99999999987543211 11110 00 00000
Q ss_pred CceeEEeccCCCCCCCCceeeeehHHHHHHHhhhCCCCeEEeCceEEEEEecCCCCCccEEEEe-CCCc--EEEccEEEe
Q 044609 84 GATQELSYAGKSGRIGSGLRSVHRQSLLEALADELPDDTIQFSSKIAAIDSQTLNGSSAAIINL-GDST--IIKAKVLIG 160 (232)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~i~~~~~v~~i~~~~~~g~~~~~v~~-~~g~--~~~a~~vV~ 160 (232)
+.... ... +.+.+.+. +++++.+++|.++..++ .. +.+.. .+|+ ++.+|.||+
T Consensus 54 ------~~~~~---------~~~---~~~~~~~~--gv~~~~~~~v~~i~~~~---~~-v~~~~~~~g~~~~~~~d~lvi 109 (447)
T 1nhp_A 54 ------DVNSV---------RYM---TGEKMESR--GVNVFSNTEITAIQPKE---HQ-VTVKDLVSGEERVENYDKLII 109 (447)
T ss_dssp ------CGGGS---------BSC---CHHHHHHT--TCEEEETEEEEEEETTT---TE-EEEEETTTCCEEEEECSEEEE
T ss_pred ------CHHHh---------hcC---CHHHHHHC--CCEEEECCEEEEEeCCC---CE-EEEEecCCCceEEEeCCEEEE
Confidence 00000 000 01233332 78999999999987653 33 66654 3465 489999999
Q ss_pred cCCCchh
Q 044609 161 CDGVHSM 167 (232)
Q Consensus 161 A~G~~S~ 167 (232)
|+|....
T Consensus 110 AtG~~p~ 116 (447)
T 1nhp_A 110 SPGAVPF 116 (447)
T ss_dssp CCCEEEC
T ss_pred cCCCCcC
Confidence 9997653
No 157
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=98.99 E-value=7.3e-09 Score=84.26 Aligned_cols=99 Identities=20% Similarity=0.361 Sum_probs=75.2
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCcEEEEecCCCCcCcceeeeecccHHHHHHHcCChHHHHhhccCceeeEEEEcCCCc
Q 044609 6 EDVVIIGAGIAGLATAVALRRLGIKALVLEKSDGLRATGAALTLSPNAWLALDALGVSHKLTSVYAPAKRVFVTNLGTGA 85 (232)
Q Consensus 6 ~dV~IvG~G~~G~~~A~~L~~~g~~v~viE~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 85 (232)
.+|+|||||++|+.+|..|++.|.+|+++|+.+.+... ...
T Consensus 168 ~~vvIiGgG~~g~e~A~~l~~~g~~V~lv~~~~~~l~~------------------~~~--------------------- 208 (455)
T 2yqu_A 168 KRLIVVGGGVIGLELGVVWHRLGAEVIVLEYMDRILPT------------------MDL--------------------- 208 (455)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTT------------------SCH---------------------
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCEEEEEecCCccccc------------------cCH---------------------
Confidence 58999999999999999999999999999987643110 000
Q ss_pred eeEEeccCCCCCCCCceeeeehHHHHHHHhhhCCCCeEEeCceEEEEEecCCCCCccEEEEeCCCcEEEccEEEecCCCc
Q 044609 86 TQELSYAGKSGRIGSGLRSVHRQSLLEALADELPDDTIQFSSKIAAIDSQTLNGSSAAIINLGDSTIIKAKVLIGCDGVH 165 (232)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~i~~~~~v~~i~~~~~~g~~~~~v~~~~g~~~~a~~vV~A~G~~ 165 (232)
-....+.+.|.+. +++++.+++|+++..++ .. +.+.+.+|+++.+|.||.|+|..
T Consensus 209 -------------------~~~~~l~~~l~~~--Gv~i~~~~~V~~i~~~~---~~-v~v~~~~g~~i~~D~vv~A~G~~ 263 (455)
T 2yqu_A 209 -------------------EVSRAAERVFKKQ--GLTIRTGVRVTAVVPEA---KG-ARVELEGGEVLEADRVLVAVGRR 263 (455)
T ss_dssp -------------------HHHHHHHHHHHHH--TCEEECSCCEEEEEEET---TE-EEEEETTSCEEEESEEEECSCEE
T ss_pred -------------------HHHHHHHHHHHHC--CCEEEECCEEEEEEEeC---CE-EEEEECCCeEEEcCEEEECcCCC
Confidence 0012233444443 89999999999998763 34 67777888899999999999998
Q ss_pred hhh
Q 044609 166 SMV 168 (232)
Q Consensus 166 S~~ 168 (232)
+..
T Consensus 264 p~~ 266 (455)
T 2yqu_A 264 PYT 266 (455)
T ss_dssp ECC
T ss_pred cCC
Confidence 754
No 158
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=98.97 E-value=8.1e-10 Score=85.99 Aligned_cols=37 Identities=32% Similarity=0.529 Sum_probs=33.4
Q ss_pred cccEEEECCCHHHHHHHHHHHh--CCCcEEEEecCCCCc
Q 044609 5 EEDVVIIGAGIAGLATAVALRR--LGIKALVLEKSDGLR 41 (232)
Q Consensus 5 ~~dV~IvG~G~~G~~~A~~L~~--~g~~v~viE~~~~~~ 41 (232)
++||+||||||+|+++|+.|++ .|++|+||||.+.++
T Consensus 65 ~~DV~IIGaGPAGlsAA~~la~~r~G~~V~viEk~~~~G 103 (326)
T 3fpz_A 65 VSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPG 103 (326)
T ss_dssp EESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSCC
T ss_pred CCCEEEECCCHHHHHHHHHHHHhCCCCeEEEEECCCCCC
Confidence 4899999999999999999975 599999999988764
No 159
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=98.97 E-value=9.4e-10 Score=87.57 Aligned_cols=37 Identities=35% Similarity=0.554 Sum_probs=31.1
Q ss_pred CCcccccEEEECCCHHHHHHHHHHHhCC--CcEEEEecCC
Q 044609 1 MEMVEEDVVIIGAGIAGLATAVALRRLG--IKALVLEKSD 38 (232)
Q Consensus 1 m~~~~~dV~IvG~G~~G~~~A~~L~~~g--~~v~viE~~~ 38 (232)
|. +++||+|||||++|+++|..|++.| .+|+++|++.
T Consensus 1 M~-~~~dvvIIG~G~aGl~aA~~l~~~g~~~~V~lie~~~ 39 (384)
T 2v3a_A 1 MS-ERAPLVIIGTGLAGYNLAREWRKLDGETPLLMITADD 39 (384)
T ss_dssp ----CCCEEEECCSHHHHHHHHHHHTTCSSSCEEEECSSC
T ss_pred CC-CCCcEEEECChHHHHHHHHHHHhhCCCCCEEEEECCC
Confidence 44 4589999999999999999999998 5689999875
No 160
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=98.96 E-value=2.1e-09 Score=88.28 Aligned_cols=132 Identities=17% Similarity=0.234 Sum_probs=72.7
Q ss_pred ccccEEEECCCHHHHHHHHHHHhC--CCcEEEEecCCCCcCcceeeeecccHHHHHHHcCChHHHHhhccCceeeEEEEc
Q 044609 4 VEEDVVIIGAGIAGLATAVALRRL--GIKALVLEKSDGLRATGAALTLSPNAWLALDALGVSHKLTSVYAPAKRVFVTNL 81 (232)
Q Consensus 4 ~~~dV~IvG~G~~G~~~A~~L~~~--g~~v~viE~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~ 81 (232)
.++||+|||||++|+++|..|++. |.+|+|||+.+....... +-+...+ .+....... ...+...
T Consensus 10 ~~~~vvIIGgG~AGl~aA~~L~~~~~g~~V~lie~~~~~~y~r~-----~lsk~l~--~~~~~~~~~------~~~~~~~ 76 (493)
T 1m6i_A 10 SHVPFLLIGGGTAAFAAARSIRARDPGARVLIVSEDPELPYMRP-----PLSKELW--FSDDPNVTK------TLRFKQW 76 (493)
T ss_dssp SEEEEEEESCSHHHHHHHHHHHHHSTTCEEEEEESSSSCCBCSG-----GGGTGGG--CC--CTHHH------HCEEECT
T ss_pred CcCCEEEECChHHHHHHHHHHHhcCCCCeEEEEeCCCCCCCCCC-----CCCHHhh--cCCccchhh------ccccccc
Confidence 458999999999999999999876 899999999875421100 0000000 000000000 0011100
Q ss_pred CCCceeEEeccCCCCCCCCceeeeehHHHHHHHhhhC-CCCeEEeCceEEEEEecCCCCCccEEEEeCCCcEEEccEEEe
Q 044609 82 GTGATQELSYAGKSGRIGSGLRSVHRQSLLEALADEL-PDDTIQFSSKIAAIDSQTLNGSSAAIINLGDSTIIKAKVLIG 160 (232)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~-~~~~i~~~~~v~~i~~~~~~g~~~~~v~~~~g~~~~a~~vV~ 160 (232)
.+....+.+.... ....... +.+.. .+++++.+++|+++..++ ..|.+.+|+++.+|.||+
T Consensus 77 -~~~~~~~~~~~~~-------~~~~~~~----l~~~~~~gv~~~~g~~v~~id~~~------~~V~~~~g~~i~yd~lvi 138 (493)
T 1m6i_A 77 -NGKERSIYFQPPS-------FYVSAQD----LPHIENGGVAVLTGKKVVQLDVRD------NMVKLNDGSQITYEKCLI 138 (493)
T ss_dssp -TSCEEESBSSCGG-------GSBCTTT----TTTSTTCEEEEEETCCEEEEEGGG------TEEEETTSCEEEEEEEEE
T ss_pred -ccccccccccchH-------hhcchhh----hhhhhcCCeEEEcCCEEEEEECCC------CEEEECCCCEEECCEEEE
Confidence 0000111111000 0111111 11111 268899999999997653 346678898999999999
Q ss_pred cCCCch
Q 044609 161 CDGVHS 166 (232)
Q Consensus 161 A~G~~S 166 (232)
|+|...
T Consensus 139 ATGs~p 144 (493)
T 1m6i_A 139 ATGGTP 144 (493)
T ss_dssp CCCEEE
T ss_pred CCCCCC
Confidence 999764
No 161
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=98.94 E-value=3.5e-09 Score=86.92 Aligned_cols=36 Identities=33% Similarity=0.460 Sum_probs=33.0
Q ss_pred cccccEEEECCCHHHHHHHHHHHhCCCcEEEEecCC
Q 044609 3 MVEEDVVIIGAGIAGLATAVALRRLGIKALVLEKSD 38 (232)
Q Consensus 3 ~~~~dV~IvG~G~~G~~~A~~L~~~g~~v~viE~~~ 38 (232)
.++|||+|||||++|+++|..|++.|++|+||||.+
T Consensus 4 ~~~~DvvVIG~G~aGl~aA~~la~~G~~V~liEk~~ 39 (488)
T 3dgz_A 4 QQSFDLLVIGGGSGGLACAKEAAQLGKKVAVADYVE 39 (488)
T ss_dssp CCEEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCC
T ss_pred CCcCCEEEECCCHHHHHHHHHHHhCCCeEEEEEecc
Confidence 356999999999999999999999999999999843
No 162
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=98.93 E-value=6.1e-09 Score=85.39 Aligned_cols=34 Identities=32% Similarity=0.437 Sum_probs=31.9
Q ss_pred ccccEEEECCCHHHHHHHHHHHhCCCcEEEEecC
Q 044609 4 VEEDVVIIGAGIAGLATAVALRRLGIKALVLEKS 37 (232)
Q Consensus 4 ~~~dV~IvG~G~~G~~~A~~L~~~g~~v~viE~~ 37 (232)
++|||+|||||++|+++|..|++.|++|+||||.
T Consensus 8 ~~~DvvVIGgG~aGl~aA~~la~~G~~V~liEk~ 41 (483)
T 3dgh_A 8 YDYDLIVIGGGSAGLACAKEAVLNGARVACLDFV 41 (483)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCC
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCEEEEEEec
Confidence 4699999999999999999999999999999964
No 163
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=98.91 E-value=5.7e-09 Score=87.18 Aligned_cols=111 Identities=16% Similarity=0.250 Sum_probs=69.4
Q ss_pred cEEEECCCHHHHHHHHHHHhC--CCcEEEEecCCCCcCcceeeeecccHHHHHHHcCChHHHHhhccCceeeEEEEcCCC
Q 044609 7 DVVIIGAGIAGLATAVALRRL--GIKALVLEKSDGLRATGAALTLSPNAWLALDALGVSHKLTSVYAPAKRVFVTNLGTG 84 (232)
Q Consensus 7 dV~IvG~G~~G~~~A~~L~~~--g~~v~viE~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~ 84 (232)
||+|||||++|+++|..|++. +.+|+|||+.+..... +..+.. .+ .+
T Consensus 3 ~VvIIGgG~AGl~aA~~L~~~~~~~~V~lie~~~~~~~~-------~~~l~~--------~~----------------~~ 51 (565)
T 3ntd_A 3 KILIIGGVAGGASAAARARRLSETAEIIMFERGEYVSFA-------NCGLPY--------HI----------------SG 51 (565)
T ss_dssp EEEEECSSHHHHHHHHHHHHHCSSSEEEEECSSSCSSBC-------GGGHHH--------HH----------------TS
T ss_pred cEEEECCCHHHHHHHHHHHhhCcCCCEEEEECCCCcccc-------ccCchH--------Hh----------------cC
Confidence 899999999999999999997 8899999998765311 111110 00 00
Q ss_pred ceeEEeccCCCCCCCCceeeeehHHHHHHHhhhCCCCeEEeCceEEEEEecCCCCCccEEEEe-CCCc--EEEccEEEec
Q 044609 85 ATQELSYAGKSGRIGSGLRSVHRQSLLEALADELPDDTIQFSSKIAAIDSQTLNGSSAAIINL-GDST--IIKAKVLIGC 161 (232)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~i~~~~~v~~i~~~~~~g~~~~~v~~-~~g~--~~~a~~vV~A 161 (232)
.. . ......... .+.+.+.. +++++++++|+++..+. .. +.+.. .+|. ++.+|.||+|
T Consensus 52 ~~-----~------~~~~~~~~~---~~~~~~~~-~i~~~~~~~V~~id~~~---~~-v~~~~~~~g~~~~~~~d~lviA 112 (565)
T 3ntd_A 52 EI-----A------QRSALVLQT---PESFKARF-NVEVRVKHEVVAIDRAA---KL-VTVRRLLDGSEYQESYDTLLLS 112 (565)
T ss_dssp SS-----C------CGGGGBCCC---HHHHHHHH-CCEEETTEEEEEEETTT---TE-EEEEETTTCCEEEEECSEEEEC
T ss_pred Cc-----C------ChHHhhccC---HHHHHHhc-CcEEEECCEEEEEECCC---CE-EEEEecCCCCeEEEECCEEEEC
Confidence 00 0 000000110 12222221 78899999999998763 43 55554 3343 7899999999
Q ss_pred CCCchh
Q 044609 162 DGVHSM 167 (232)
Q Consensus 162 ~G~~S~ 167 (232)
+|....
T Consensus 113 tG~~p~ 118 (565)
T 3ntd_A 113 PGAAPI 118 (565)
T ss_dssp CCEEEC
T ss_pred CCCCCC
Confidence 998543
No 164
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=98.90 E-value=1.9e-08 Score=81.76 Aligned_cols=100 Identities=22% Similarity=0.283 Sum_probs=75.6
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCcEEEEecCCCCcCcceeeeecccHHHHHHHcCChHHHHhhccCceeeEEEEcCCCc
Q 044609 6 EDVVIIGAGIAGLATAVALRRLGIKALVLEKSDGLRATGAALTLSPNAWLALDALGVSHKLTSVYAPAKRVFVTNLGTGA 85 (232)
Q Consensus 6 ~dV~IvG~G~~G~~~A~~L~~~g~~v~viE~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 85 (232)
.+|+|||||+.|+-+|..|++.|.+|+++|+.+.+... +..
T Consensus 168 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~------------------~~~--------------------- 208 (450)
T 1ges_A 168 ERVAVVGAGYIGVELGGVINGLGAKTHLFEMFDAPLPS------------------FDP--------------------- 208 (450)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTT------------------SCH---------------------
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCEEEEEEeCCchhhh------------------hhH---------------------
Confidence 58999999999999999999999999999987643100 000
Q ss_pred eeEEeccCCCCCCCCceeeeehHHHHHHHhhhCCCCeEEeCceEEEEEecCCCCCccEEEEeCCCcEEEccEEEecCCCc
Q 044609 86 TQELSYAGKSGRIGSGLRSVHRQSLLEALADELPDDTIQFSSKIAAIDSQTLNGSSAAIINLGDSTIIKAKVLIGCDGVH 165 (232)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~i~~~~~v~~i~~~~~~g~~~~~v~~~~g~~~~a~~vV~A~G~~ 165 (232)
-....+.+.|.+. +++++++++|++++.++ +.. +.|.+.+|+++.+|.||.|+|..
T Consensus 209 -------------------~~~~~l~~~l~~~--Gv~i~~~~~v~~i~~~~--~~~-~~v~~~~g~~i~~D~vv~a~G~~ 264 (450)
T 1ges_A 209 -------------------MISETLVEVMNAE--GPQLHTNAIPKAVVKNT--DGS-LTLELEDGRSETVDCLIWAIGRE 264 (450)
T ss_dssp -------------------HHHHHHHHHHHHH--SCEEECSCCEEEEEECT--TSC-EEEEETTSCEEEESEEEECSCEE
T ss_pred -------------------HHHHHHHHHHHHC--CCEEEeCCEEEEEEEeC--CcE-EEEEECCCcEEEcCEEEECCCCC
Confidence 0122334444443 89999999999998754 233 67888899899999999999988
Q ss_pred hhh
Q 044609 166 SMV 168 (232)
Q Consensus 166 S~~ 168 (232)
+..
T Consensus 265 p~~ 267 (450)
T 1ges_A 265 PAN 267 (450)
T ss_dssp ESC
T ss_pred cCC
Confidence 754
No 165
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=98.89 E-value=1.5e-08 Score=81.00 Aligned_cols=105 Identities=13% Similarity=0.180 Sum_probs=66.1
Q ss_pred ccEEEECCCHHHHHHHHHHHhCC--CcEEEEecCCCCcCcceeeeecccHHHHHHHcCChHHHHhhccCceeeEEEEcCC
Q 044609 6 EDVVIIGAGIAGLATAVALRRLG--IKALVLEKSDGLRATGAALTLSPNAWLALDALGVSHKLTSVYAPAKRVFVTNLGT 83 (232)
Q Consensus 6 ~dV~IvG~G~~G~~~A~~L~~~g--~~v~viE~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~ 83 (232)
.+|+|||||++|+++|..|++.+ .+|+|||+++..... +. +..+.......
T Consensus 3 KkVvIIG~G~AG~~aA~~L~~~~~~~~Vtlie~~~~~~~~-------p~----------~~~v~~g~~~~---------- 55 (401)
T 3vrd_B 3 RKVVVVGGGTGGATAAKYIKLADPSIEVTLIEPNETYYTC-------YM----------SNEVIGGDREL---------- 55 (401)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSCSSEECS-------TT----------HHHHHHTSSCG----------
T ss_pred CEEEEECCcHHHHHHHHHHHhcCcCCeEEEEeCCCCCCCc-------cC----------HHHHhcCCCCH----------
Confidence 47999999999999999998865 689999987642111 11 11111000000
Q ss_pred CceeEEeccCCCCCCCCceeeeehHHHHHHHhhhCCCCeEEeCceEEEEEecCCCCCccEEEEeCCCcEEEccEEEecCC
Q 044609 84 GATQELSYAGKSGRIGSGLRSVHRQSLLEALADELPDDTIQFSSKIAAIDSQTLNGSSAAIINLGDSTIIKAKVLIGCDG 163 (232)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~i~~~~~v~~i~~~~~~g~~~~~v~~~~g~~~~a~~vV~A~G 163 (232)
........ .+.+ .+++++.+ +|+++..+. -.|.+.+|.++.+|.||+|+|
T Consensus 56 -----------------~~~~~~~~----~~~~--~gv~~i~~-~v~~id~~~------~~v~~~~g~~i~yd~LviAtG 105 (401)
T 3vrd_B 56 -----------------ASLRVGYD----GLRA--HGIQVVHD-SALGIDPDK------KLVKTAGGAEFAYDRCVVAPG 105 (401)
T ss_dssp -----------------GGGEECSH----HHHH--TTCEEECS-CEEEEETTT------TEEEETTSCEEECSEEEECCC
T ss_pred -----------------HHHhhCHH----HHHH--CCCEEEEe-EEEEEEccC------cEEEecccceeecceeeeccC
Confidence 00011111 1222 26777654 788887653 346788999999999999999
Q ss_pred Cchh
Q 044609 164 VHSM 167 (232)
Q Consensus 164 ~~S~ 167 (232)
....
T Consensus 106 ~~~~ 109 (401)
T 3vrd_B 106 IDLL 109 (401)
T ss_dssp EEEC
T ss_pred Cccc
Confidence 7643
No 166
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=98.89 E-value=9.7e-09 Score=83.75 Aligned_cols=99 Identities=17% Similarity=0.243 Sum_probs=73.3
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCcEEEEecCCCCcCcceeeeecccHHHHHHHcCChHHHHhhccCceeeEEEEcCCCc
Q 044609 6 EDVVIIGAGIAGLATAVALRRLGIKALVLEKSDGLRATGAALTLSPNAWLALDALGVSHKLTSVYAPAKRVFVTNLGTGA 85 (232)
Q Consensus 6 ~dV~IvG~G~~G~~~A~~L~~~g~~v~viE~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 85 (232)
.+|+|||||++|+-+|..|++.|.+|+++|+.+.+...
T Consensus 170 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~------------------------------------------ 207 (464)
T 2eq6_A 170 KRLLVIGGGAVGLELGQVYRRLGAEVTLIEYMPEILPQ------------------------------------------ 207 (464)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTT------------------------------------------
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCeEEEEEcCCccccc------------------------------------------
Confidence 58999999999999999999999999999987654111
Q ss_pred eeEEeccCCCCCCCCceeeeehHHHHHHHhhhCCCCeEEeCceEEEEEecCCCCCccEEEEeC-C--Cc--EEEccEEEe
Q 044609 86 TQELSYAGKSGRIGSGLRSVHRQSLLEALADELPDDTIQFSSKIAAIDSQTLNGSSAAIINLG-D--ST--IIKAKVLIG 160 (232)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~i~~~~~v~~i~~~~~~g~~~~~v~~~-~--g~--~~~a~~vV~ 160 (232)
+ .. -....+.+.|.+. +++++++++|+++..++ .. +.+.+. + |+ ++.+|.||.
T Consensus 208 -----~-------~~----~~~~~l~~~l~~~--gV~i~~~~~v~~i~~~~---~~-~~v~~~~~~~g~~~~i~~D~vv~ 265 (464)
T 2eq6_A 208 -----G-------DP----ETAALLRRALEKE--GIRVRTKTKAVGYEKKK---DG-LHVRLEPAEGGEGEEVVVDKVLV 265 (464)
T ss_dssp -----S-------CH----HHHHHHHHHHHHT--TCEEECSEEEEEEEEET---TE-EEEEEEETTCCSCEEEEESEEEE
T ss_pred -----c-------CH----HHHHHHHHHHHhc--CCEEEcCCEEEEEEEeC---CE-EEEEEeecCCCceeEEEcCEEEE
Confidence 0 00 0012234444443 89999999999998753 33 556665 5 76 899999999
Q ss_pred cCCCchhh
Q 044609 161 CDGVHSMV 168 (232)
Q Consensus 161 A~G~~S~~ 168 (232)
|+|..+..
T Consensus 266 a~G~~p~~ 273 (464)
T 2eq6_A 266 AVGRKPRT 273 (464)
T ss_dssp CSCEEESC
T ss_pred CCCcccCC
Confidence 99988754
No 167
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=98.88 E-value=8.7e-09 Score=85.26 Aligned_cols=37 Identities=32% Similarity=0.467 Sum_probs=34.2
Q ss_pred ccccEEEECCCHHHHHHHHHHHhCCCcEEEEecCCCC
Q 044609 4 VEEDVVIIGAGIAGLATAVALRRLGIKALVLEKSDGL 40 (232)
Q Consensus 4 ~~~dV~IvG~G~~G~~~A~~L~~~g~~v~viE~~~~~ 40 (232)
.++||+|||||++|+++|..|++.|++|+|||+++.+
T Consensus 42 ~~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~~~ 78 (523)
T 1mo9_A 42 REYDAIFIGGGAAGRFGSAYLRAMGGRQLIVDRWPFL 78 (523)
T ss_dssp SCBSEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSS
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCC
Confidence 3589999999999999999999999999999998754
No 168
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=98.88 E-value=7.7e-09 Score=84.90 Aligned_cols=33 Identities=27% Similarity=0.372 Sum_probs=31.1
Q ss_pred ccccEEEECCCHHHHHHHHHHHh-CCCcEEEEec
Q 044609 4 VEEDVVIIGAGIAGLATAVALRR-LGIKALVLEK 36 (232)
Q Consensus 4 ~~~dV~IvG~G~~G~~~A~~L~~-~g~~v~viE~ 36 (232)
.++||+|||||++|+++|+.|++ .|++|+|||+
T Consensus 2 ~~~dvvVIGgG~aGl~aA~~la~~~G~~V~liE~ 35 (490)
T 1fec_A 2 RAYDLVVIGAGSGGLEAGWNAASLHKKRVAVIDL 35 (490)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHHHCCCEEEEES
T ss_pred ccccEEEECCCHHHHHHHHHHHHHcCCEEEEEec
Confidence 46899999999999999999999 9999999993
No 169
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=98.85 E-value=3.2e-09 Score=86.36 Aligned_cols=39 Identities=28% Similarity=0.402 Sum_probs=36.0
Q ss_pred cccEEEECCCHHHHHHHHHHHhCCCcEEEEecCCCCcCc
Q 044609 5 EEDVVIIGAGIAGLATAVALRRLGIKALVLEKSDGLRAT 43 (232)
Q Consensus 5 ~~dV~IvG~G~~G~~~A~~L~~~g~~v~viE~~~~~~~~ 43 (232)
++||+|||||++||++|..|+++|++|+|+|+++.++..
T Consensus 11 ~~dvvVIGaG~~GL~aA~~La~~G~~V~vlE~~~~~GG~ 49 (453)
T 2bcg_G 11 DYDVIVLGTGITECILSGLLSVDGKKVLHIDKQDHYGGE 49 (453)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGG
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCeEEEEeCCCCCCcc
Confidence 489999999999999999999999999999999887543
No 170
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=98.82 E-value=4.5e-09 Score=84.64 Aligned_cols=41 Identities=37% Similarity=0.563 Sum_probs=36.0
Q ss_pred CC-cccccEEEECCCHHHHHHHHHHHhCC-CcEEEEecCCCCc
Q 044609 1 ME-MVEEDVVIIGAGIAGLATAVALRRLG-IKALVLEKSDGLR 41 (232)
Q Consensus 1 m~-~~~~dV~IvG~G~~G~~~A~~L~~~g-~~v~viE~~~~~~ 41 (232)
|+ ++++||+|||||++|+++|+.|+++| ++|+|+|+.+.++
T Consensus 1 M~~~~~~~v~IIGaG~aGl~aA~~L~~~g~~~v~v~E~~~~~G 43 (424)
T 2b9w_A 1 MSISKDSRIAIIGAGPAGLAAGMYLEQAGFHDYTILERTDHVG 43 (424)
T ss_dssp -CCCTTCCEEEECCSHHHHHHHHHHHHTTCCCEEEECSSSCSS
T ss_pred CCCCCCCCEEEECcCHHHHHHHHHHHhCCCCcEEEEECCCCCC
Confidence 54 35689999999999999999999999 9999999988764
No 171
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=98.81 E-value=2.7e-08 Score=80.76 Aligned_cols=99 Identities=22% Similarity=0.302 Sum_probs=71.1
Q ss_pred cccEEEECCCHHHHHHHHHHHhCCCcEEEEecCCCCcCcceeeeecccHHHHHHHcCChHHHHhhccCceeeEEEEcCCC
Q 044609 5 EEDVVIIGAGIAGLATAVALRRLGIKALVLEKSDGLRATGAALTLSPNAWLALDALGVSHKLTSVYAPAKRVFVTNLGTG 84 (232)
Q Consensus 5 ~~dV~IvG~G~~G~~~A~~L~~~g~~v~viE~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~ 84 (232)
..+|+|||+|++|+.+|..|++.|.+|+++|+.+.+.... +
T Consensus 149 ~~~vvIiG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~---------------~------------------------ 189 (447)
T 1nhp_A 149 VNNVVVIGSGYIGIEAAEAFAKAGKKVTVIDILDRPLGVY---------------L------------------------ 189 (447)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTTTT---------------C------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCeEEEEecCccccccc---------------C------------------------
Confidence 4789999999999999999999999999999976431100 0
Q ss_pred ceeEEeccCCCCCCCCceeeeehHHHHHHHhhhCCCCeEEeCceEEEEEecCCCCCccEEEEeCCCcEEEccEEEecCCC
Q 044609 85 ATQELSYAGKSGRIGSGLRSVHRQSLLEALADELPDDTIQFSSKIAAIDSQTLNGSSAAIINLGDSTIIKAKVLIGCDGV 164 (232)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~i~~~~~v~~i~~~~~~g~~~~~v~~~~g~~~~a~~vV~A~G~ 164 (232)
.. -....+.+.+.+ .+++++++++|+++..+ +.. ..+.+ ++.++.||.||.|+|.
T Consensus 190 --------------~~----~~~~~l~~~l~~--~gv~i~~~~~v~~i~~~---~~v-~~v~~-~~~~i~~d~vi~a~G~ 244 (447)
T 1nhp_A 190 --------------DK----EFTDVLTEEMEA--NNITIATGETVERYEGD---GRV-QKVVT-DKNAYDADLVVVAVGV 244 (447)
T ss_dssp --------------CH----HHHHHHHHHHHT--TTEEEEESCCEEEEECS---SBC-CEEEE-SSCEEECSEEEECSCE
T ss_pred --------------CH----HHHHHHHHHHHh--CCCEEEcCCEEEEEEcc---CcE-EEEEE-CCCEEECCEEEECcCC
Confidence 00 001223333433 28999999999999764 232 34555 5568999999999998
Q ss_pred chh
Q 044609 165 HSM 167 (232)
Q Consensus 165 ~S~ 167 (232)
.+.
T Consensus 245 ~p~ 247 (447)
T 1nhp_A 245 RPN 247 (447)
T ss_dssp EES
T ss_pred CCC
Confidence 764
No 172
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=98.81 E-value=5.3e-08 Score=79.36 Aligned_cols=99 Identities=22% Similarity=0.255 Sum_probs=74.8
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCcEEEEecCCCCcCcceeeeecccHHHHHHHcCChHHHHhhccCceeeEEEEcCCCc
Q 044609 6 EDVVIIGAGIAGLATAVALRRLGIKALVLEKSDGLRATGAALTLSPNAWLALDALGVSHKLTSVYAPAKRVFVTNLGTGA 85 (232)
Q Consensus 6 ~dV~IvG~G~~G~~~A~~L~~~g~~v~viE~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 85 (232)
.+|+|||||.+|+-+|..|++.|.+|+++|+.+.+-.. +...
T Consensus 167 ~~vvVvGgG~~g~e~A~~l~~~G~~Vtlv~~~~~~l~~------------------~~~~-------------------- 208 (463)
T 2r9z_A 167 KRVAIIGAGYIGIELAGLLRSFGSEVTVVALEDRLLFQ------------------FDPL-------------------- 208 (463)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTT------------------SCHH--------------------
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCccccc------------------cCHH--------------------
Confidence 58999999999999999999999999999987643100 0000
Q ss_pred eeEEeccCCCCCCCCceeeeehHHHHHHHhhhCCCCeEEeCceEEEEEecCCCCCccEEEEeCCCc-EEEccEEEecCCC
Q 044609 86 TQELSYAGKSGRIGSGLRSVHRQSLLEALADELPDDTIQFSSKIAAIDSQTLNGSSAAIINLGDST-IIKAKVLIGCDGV 164 (232)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~i~~~~~v~~i~~~~~~g~~~~~v~~~~g~-~~~a~~vV~A~G~ 164 (232)
....+.+.|.+. +++++.+++|+++..++ +. +.|.+.+|+ ++.+|.||.|+|.
T Consensus 209 --------------------~~~~l~~~l~~~--gv~i~~~~~v~~i~~~~---~~-~~v~~~~G~~~i~~D~vv~a~G~ 262 (463)
T 2r9z_A 209 --------------------LSATLAENMHAQ--GIETHLEFAVAALERDA---QG-TTLVAQDGTRLEGFDSVIWAVGR 262 (463)
T ss_dssp --------------------HHHHHHHHHHHT--TCEEESSCCEEEEEEET---TE-EEEEETTCCEEEEESEEEECSCE
T ss_pred --------------------HHHHHHHHHHHC--CCEEEeCCEEEEEEEeC---Ce-EEEEEeCCcEEEEcCEEEECCCC
Confidence 012234444443 89999999999998753 33 678888998 8999999999998
Q ss_pred chhh
Q 044609 165 HSMV 168 (232)
Q Consensus 165 ~S~~ 168 (232)
.+..
T Consensus 263 ~p~~ 266 (463)
T 2r9z_A 263 APNT 266 (463)
T ss_dssp EESC
T ss_pred CcCC
Confidence 7654
No 173
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=98.81 E-value=1.1e-08 Score=84.31 Aligned_cols=61 Identities=30% Similarity=0.448 Sum_probs=47.4
Q ss_pred cccEEEECCCHHHHHHHHHHHhCCCcEEEEecCCCCcCccee-------e-----e---ecccHHHHHHHcCChHH
Q 044609 5 EEDVVIIGAGIAGLATAVALRRLGIKALVLEKSDGLRATGAA-------L-----T---LSPNAWLALDALGVSHK 65 (232)
Q Consensus 5 ~~dV~IvG~G~~G~~~A~~L~~~g~~v~viE~~~~~~~~~~~-------~-----~---~~~~~~~~l~~~g~~~~ 65 (232)
.+||+|||||++|+++|+.|+++|++|+|+|+.+.++..... + . ..+...+.++++|+...
T Consensus 13 ~~~v~iiG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~GG~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~lgl~~~ 88 (504)
T 1sez_A 13 AKRVAVIGAGVSGLAAAYKLKIHGLNVTVFEAEGKAGGKLRSVSQDGLIWDEGANTMTESEGDVTFLIDSLGLREK 88 (504)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTSCEEEEECSSSSSCSSCCEEEETTEEEESSCCCBCCCSHHHHHHHHHTTCGGG
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCcEEEEEeCCCCCCceeeeccCCeEEecCCcccccCcHHHHHHHHHcCCccc
Confidence 479999999999999999999999999999999876432111 0 1 12456788899988654
No 174
>1v0j_A UDP-galactopyranose mutase; flavoprotein, isomerase; HET: FAD BCN; 2.25A {Mycobacterium tuberculosis}
Probab=98.79 E-value=5.4e-09 Score=83.61 Aligned_cols=36 Identities=28% Similarity=0.475 Sum_probs=34.0
Q ss_pred cccEEEECCCHHHHHHHHHHHhC-CCcEEEEecCCCC
Q 044609 5 EEDVVIIGAGIAGLATAVALRRL-GIKALVLEKSDGL 40 (232)
Q Consensus 5 ~~dV~IvG~G~~G~~~A~~L~~~-g~~v~viE~~~~~ 40 (232)
++||+|||||++|+++|+.|+++ |++|+|+|+++.+
T Consensus 7 ~~~v~IiGaG~~Gl~aA~~L~~~~g~~v~v~E~~~~~ 43 (399)
T 1v0j_A 7 RFDLFVVGSGFFGLTIAERVATQLDKRVLVLERRPHI 43 (399)
T ss_dssp SCSEEEECCSHHHHHHHHHHHHHSCCCEEEECSSSSS
T ss_pred cCCEEEECCCHHHHHHHHHHHHhCCCCEEEEeCCCCC
Confidence 58999999999999999999998 9999999998765
No 175
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=98.79 E-value=2.8e-08 Score=82.22 Aligned_cols=35 Identities=29% Similarity=0.480 Sum_probs=32.7
Q ss_pred cccEEEECCCHHHHHHHHHHHhCCCcEEEEecCCC
Q 044609 5 EEDVVIIGAGIAGLATAVALRRLGIKALVLEKSDG 39 (232)
Q Consensus 5 ~~dV~IvG~G~~G~~~A~~L~~~g~~v~viE~~~~ 39 (232)
+|||+||||||+|+++|..+++.|.+|+|||+...
T Consensus 42 dYDviVIG~GpaG~~aA~~aa~~G~kValIE~~~~ 76 (542)
T 4b1b_A 42 DYDYVVIGGGPGGMASAKEAAAHGARVLLFDYVKP 76 (542)
T ss_dssp SEEEEEECCSHHHHHHHHHHHTTTCCEEEECCCCC
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCeEEEEecccc
Confidence 48999999999999999999999999999998654
No 176
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=98.77 E-value=9.9e-08 Score=78.11 Aligned_cols=101 Identities=21% Similarity=0.298 Sum_probs=75.4
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCcEEEEecCCCCcCcceeeeecccHHHHHHHcCChHHHHhhccCceeeEEEEcCCCc
Q 044609 6 EDVVIIGAGIAGLATAVALRRLGIKALVLEKSDGLRATGAALTLSPNAWLALDALGVSHKLTSVYAPAKRVFVTNLGTGA 85 (232)
Q Consensus 6 ~dV~IvG~G~~G~~~A~~L~~~g~~v~viE~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 85 (232)
.+|+|||||..|+-+|..|++.|.+|+++|+.+.+-.. +..
T Consensus 186 ~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~~------------------~d~--------------------- 226 (479)
T 2hqm_A 186 KKVVVVGAGYIGIELAGVFHGLGSETHLVIRGETVLRK------------------FDE--------------------- 226 (479)
T ss_dssp SEEEEECSSHHHHHHHHHHHHTTCEEEEECSSSSSCTT------------------SCH---------------------
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCceEEEEeCCccccc------------------cCH---------------------
Confidence 58999999999999999999999999999987643110 000
Q ss_pred eeEEeccCCCCCCCCceeeeehHHHHHHHhhhCCCCeEEeCceEEEEEecCCCCCccEEEEeCCC-cEEEccEEEecCCC
Q 044609 86 TQELSYAGKSGRIGSGLRSVHRQSLLEALADELPDDTIQFSSKIAAIDSQTLNGSSAAIINLGDS-TIIKAKVLIGCDGV 164 (232)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~i~~~~~v~~i~~~~~~g~~~~~v~~~~g-~~~~a~~vV~A~G~ 164 (232)
-....+.+.|.+. +++++++++|++++.+++ +.. +.|.+.+| +++.||.||.|+|.
T Consensus 227 -------------------~~~~~l~~~l~~~--Gv~i~~~~~v~~i~~~~~-~~~-~~v~~~~G~~~i~~D~vv~a~G~ 283 (479)
T 2hqm_A 227 -------------------CIQNTITDHYVKE--GINVHKLSKIVKVEKNVE-TDK-LKIHMNDSKSIDDVDELIWTIGR 283 (479)
T ss_dssp -------------------HHHHHHHHHHHHH--TCEEECSCCEEEEEECC--CCC-EEEEETTSCEEEEESEEEECSCE
T ss_pred -------------------HHHHHHHHHHHhC--CeEEEeCCEEEEEEEcCC-CcE-EEEEECCCcEEEEcCEEEECCCC
Confidence 0012334445443 899999999999987542 323 67788898 78999999999998
Q ss_pred chhh
Q 044609 165 HSMV 168 (232)
Q Consensus 165 ~S~~ 168 (232)
.++.
T Consensus 284 ~p~~ 287 (479)
T 2hqm_A 284 KSHL 287 (479)
T ss_dssp EECC
T ss_pred CCcc
Confidence 7654
No 177
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=98.77 E-value=1.3e-07 Score=76.04 Aligned_cols=101 Identities=19% Similarity=0.314 Sum_probs=75.4
Q ss_pred cccEEEECCCHHHHHHHHHHHhCCCcEEEEecCCCCcCcceeeeecccHHHHHHHcCChHHHHhhccCceeeEEEEcCCC
Q 044609 5 EEDVVIIGAGIAGLATAVALRRLGIKALVLEKSDGLRATGAALTLSPNAWLALDALGVSHKLTSVYAPAKRVFVTNLGTG 84 (232)
Q Consensus 5 ~~dV~IvG~G~~G~~~A~~L~~~g~~v~viE~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~ 84 (232)
..+|+|||+|..|+-+|..|++.|.+|+++|+.+.+-...
T Consensus 152 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtvv~~~~~~l~~~---------------------------------------- 191 (415)
T 3lxd_A 152 AKNAVVIGGGYIGLEAAAVLTKFGVNVTLLEALPRVLARV---------------------------------------- 191 (415)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTTTT----------------------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCeEEEEecCCchhhhh----------------------------------------
Confidence 3579999999999999999999999999999876541100
Q ss_pred ceeEEeccCCCCCCCCceeeeehHHHHHHHhhhCCCCeEEeCceEEEEEecCCCCCccEEEEeCCCcEEEccEEEecCCC
Q 044609 85 ATQELSYAGKSGRIGSGLRSVHRQSLLEALADELPDDTIQFSSKIAAIDSQTLNGSSAAIINLGDSTIIKAKVLIGCDGV 164 (232)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~i~~~~~v~~i~~~~~~g~~~~~v~~~~g~~~~a~~vV~A~G~ 164 (232)
. . .--...+.+.+.+. |++++++++|+++..++ +.. ..|.+.+|+++.||.||.|.|.
T Consensus 192 ----------~---~----~~~~~~l~~~l~~~--GV~i~~~~~v~~i~~~~--~~v-~~v~l~dG~~i~aD~Vv~a~G~ 249 (415)
T 3lxd_A 192 ----------A---G----EALSEFYQAEHRAH--GVDLRTGAAMDCIEGDG--TKV-TGVRMQDGSVIPADIVIVGIGI 249 (415)
T ss_dssp ----------S---C----HHHHHHHHHHHHHT--TCEEEETCCEEEEEESS--SBE-EEEEESSSCEEECSEEEECSCC
T ss_pred ----------c---C----HHHHHHHHHHHHhC--CCEEEECCEEEEEEecC--CcE-EEEEeCCCCEEEcCEEEECCCC
Confidence 0 0 00012223333332 89999999999998764 343 5788999999999999999998
Q ss_pred chh
Q 044609 165 HSM 167 (232)
Q Consensus 165 ~S~ 167 (232)
.+.
T Consensus 250 ~p~ 252 (415)
T 3lxd_A 250 VPC 252 (415)
T ss_dssp EES
T ss_pred ccC
Confidence 764
No 178
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=98.75 E-value=4.1e-08 Score=86.68 Aligned_cols=37 Identities=35% Similarity=0.583 Sum_probs=34.2
Q ss_pred cccEEEECCCHHHHHHHHHHHhCCCcEEEEecCCCCc
Q 044609 5 EEDVVIIGAGIAGLATAVALRRLGIKALVLEKSDGLR 41 (232)
Q Consensus 5 ~~dV~IvG~G~~G~~~A~~L~~~g~~v~viE~~~~~~ 41 (232)
++||+||||||+|+++|..|++.|++|+|||+.+.++
T Consensus 128 ~~dVvVIGaGpAGl~AA~~la~~G~~V~lie~~~~~G 164 (965)
T 2gag_A 128 HTDVLVVGAGPAGLAAAREASRSGARVMLLDERAEAG 164 (965)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSS
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCCCCC
Confidence 4899999999999999999999999999999987653
No 179
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=98.75 E-value=5.9e-09 Score=85.63 Aligned_cols=38 Identities=32% Similarity=0.522 Sum_probs=34.6
Q ss_pred CCcccccEEEECCCHHHHHHHHHHHhCCCcEEEEecCC
Q 044609 1 MEMVEEDVVIIGAGIAGLATAVALRRLGIKALVLEKSD 38 (232)
Q Consensus 1 m~~~~~dV~IvG~G~~G~~~A~~L~~~g~~v~viE~~~ 38 (232)
|+..+|||+|||||++|+++|..|++.|++|+|||+++
T Consensus 4 M~~~~~DvvVIGgG~aGl~aA~~la~~G~~V~liE~~~ 41 (492)
T 3ic9_A 4 MKVINVDVAIIGTGTAGMGAYRAAKKHTDKVVLIEGGA 41 (492)
T ss_dssp CEEEEEEEEEECCSHHHHHHHHHHHTTCSCEEEEESSC
T ss_pred CccCCCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCC
Confidence 44446999999999999999999999999999999975
No 180
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=98.75 E-value=4.6e-08 Score=79.15 Aligned_cols=111 Identities=15% Similarity=0.181 Sum_probs=66.8
Q ss_pred ccEEEECCCHHHHHHHHHHHhCC--CcEEEEecCCCCcCcceeeeecccHHHHHHHcCChHHHHhhccCceeeEEEEcCC
Q 044609 6 EDVVIIGAGIAGLATAVALRRLG--IKALVLEKSDGLRATGAALTLSPNAWLALDALGVSHKLTSVYAPAKRVFVTNLGT 83 (232)
Q Consensus 6 ~dV~IvG~G~~G~~~A~~L~~~g--~~v~viE~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~ 83 (232)
++|+|||||++|+++|..|++.| .+|+|||+++.......+ +. .+..... .
T Consensus 1 PKVvIIG~G~AGl~aA~~l~~~g~~~~V~lie~~~~~~~~~~~-------l~---------~~~~~~~-----------~ 53 (437)
T 4eqs_A 1 PKIVVVGAVAGGATCASQIRRLDKESDIIIFEKDRDMSFANCA-------LP---------YVIGEVV-----------E 53 (437)
T ss_dssp CCEEEECCSTTHHHHHHHHHHHCSSSCEEEEESSSCSSBCGGG-------HH---------HHHTTSS-----------C
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCCCcEEEEeCCCCCCCCcch-------hH---------HHHcCCc-----------c
Confidence 37999999999999999999987 579999998654221110 00 0000000 0
Q ss_pred CceeEEeccCCCCCCCCceeeeehHHHHHHHhhhCCCCeEEeCceEEEEEecCCCCCccEEEEeCC---CcEEEccEEEe
Q 044609 84 GATQELSYAGKSGRIGSGLRSVHRQSLLEALADELPDDTIQFSSKIAAIDSQTLNGSSAAIINLGD---STIIKAKVLIG 160 (232)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~i~~~~~v~~i~~~~~~g~~~~~v~~~~---g~~~~a~~vV~ 160 (232)
. ...........+ +.+. +++++.+++|+++..+. .. +.+.... +.++.+|.||+
T Consensus 54 ----~----------~~~~~~~~~~~~---~~~~--~i~~~~~~~V~~id~~~---~~-~~~~~~~~~~~~~~~yd~lVI 110 (437)
T 4eqs_A 54 ----D----------RRYALAYTPEKF---YDRK--QITVKTYHEVIAINDER---QT-VSVLNRKTNEQFEESYDKLIL 110 (437)
T ss_dssp ----C----------GGGTBCCCHHHH---HHHH--CCEEEETEEEEEEETTT---TE-EEEEETTTTEEEEEECSEEEE
T ss_pred ----c----------hhhhhhcCHHHH---HHhc--CCEEEeCCeEEEEEccC---cE-EEEEeccCCceEEEEcCEEEE
Confidence 0 000001112222 2222 78899999999997653 33 4444332 23688999999
Q ss_pred cCCCch
Q 044609 161 CDGVHS 166 (232)
Q Consensus 161 A~G~~S 166 (232)
|+|...
T Consensus 111 ATGs~p 116 (437)
T 4eqs_A 111 SPGASA 116 (437)
T ss_dssp CCCEEE
T ss_pred CCCCcc
Confidence 999764
No 181
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.75 E-value=1.3e-07 Score=77.85 Aligned_cols=100 Identities=17% Similarity=0.285 Sum_probs=75.2
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCcEEEEecCCCCcCcceeeeecccHHHHHHHcCChHHHHhhccCceeeEEEEcCCCc
Q 044609 6 EDVVIIGAGIAGLATAVALRRLGIKALVLEKSDGLRATGAALTLSPNAWLALDALGVSHKLTSVYAPAKRVFVTNLGTGA 85 (232)
Q Consensus 6 ~dV~IvG~G~~G~~~A~~L~~~g~~v~viE~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 85 (232)
.+|+|||||+.|+-+|..|++.|.+|+++|+.+.+-.. +..
T Consensus 177 ~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~~------------------~d~--------------------- 217 (500)
T 1onf_A 177 KKIGIVGSGYIAVELINVIKRLGIDSYIFARGNRILRK------------------FDE--------------------- 217 (500)
T ss_dssp SEEEEECCSHHHHHHHHHHHTTTCEEEEECSSSSSCTT------------------SCH---------------------
T ss_pred CeEEEECChHHHHHHHHHHHHcCCeEEEEecCCccCcc------------------cch---------------------
Confidence 57999999999999999999999999999987643110 000
Q ss_pred eeEEeccCCCCCCCCceeeeehHHHHHHHhhhCCCCeEEeCceEEEEEecCCCCCccEEEEeCCCcE-EEccEEEecCCC
Q 044609 86 TQELSYAGKSGRIGSGLRSVHRQSLLEALADELPDDTIQFSSKIAAIDSQTLNGSSAAIINLGDSTI-IKAKVLIGCDGV 164 (232)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~i~~~~~v~~i~~~~~~g~~~~~v~~~~g~~-~~a~~vV~A~G~ 164 (232)
-....+.+.|.+. +++++.+++|+++..++ +.. +.|.+.+|++ +.+|.||.|.|.
T Consensus 218 -------------------~~~~~l~~~l~~~--gv~i~~~~~v~~i~~~~--~~~-~~v~~~~g~~~~~~D~vi~a~G~ 273 (500)
T 1onf_A 218 -------------------SVINVLENDMKKN--NINIVTFADVVEIKKVS--DKN-LSIHLSDGRIYEHFDHVIYCVGR 273 (500)
T ss_dssp -------------------HHHHHHHHHHHHT--TCEEECSCCEEEEEESS--TTC-EEEEETTSCEEEEESEEEECCCB
T ss_pred -------------------hhHHHHHHHHHhC--CCEEEECCEEEEEEEcC--Cce-EEEEECCCcEEEECCEEEECCCC
Confidence 0112334445443 89999999999998754 233 6778889987 999999999998
Q ss_pred chhh
Q 044609 165 HSMV 168 (232)
Q Consensus 165 ~S~~ 168 (232)
....
T Consensus 274 ~p~~ 277 (500)
T 1onf_A 274 SPDT 277 (500)
T ss_dssp CCTT
T ss_pred CcCC
Confidence 7654
No 182
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=98.74 E-value=4.1e-08 Score=78.79 Aligned_cols=99 Identities=21% Similarity=0.361 Sum_probs=74.7
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCcEEEEecCCCCcCcceeeeecccHHHHHHHcCChHHHHhhccCceeeEEEEcCCCc
Q 044609 6 EDVVIIGAGIAGLATAVALRRLGIKALVLEKSDGLRATGAALTLSPNAWLALDALGVSHKLTSVYAPAKRVFVTNLGTGA 85 (232)
Q Consensus 6 ~dV~IvG~G~~G~~~A~~L~~~g~~v~viE~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 85 (232)
.+|+|||+|..|+-+|..|++.|.+|+++|+.+.+-.. . +
T Consensus 144 ~~vvViGgG~~g~E~A~~l~~~g~~Vtvv~~~~~~l~~------------~---~------------------------- 183 (410)
T 3ef6_A 144 TRLLIVGGGLIGCEVATTARKLGLSVTILEAGDELLVR------------V---L------------------------- 183 (410)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSHH------------H---H-------------------------
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCeEEEEecCCccchh------------h---c-------------------------
Confidence 58999999999999999999999999999987654100 0 0
Q ss_pred eeEEeccCCCCCCCCceeeeehHHHHHHHhhhCCCCeEEeCceEEEEEecCCCCCccEEEEeCCCcEEEccEEEecCCCc
Q 044609 86 TQELSYAGKSGRIGSGLRSVHRQSLLEALADELPDDTIQFSSKIAAIDSQTLNGSSAAIINLGDSTIIKAKVLIGCDGVH 165 (232)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~i~~~~~v~~i~~~~~~g~~~~~v~~~~g~~~~a~~vV~A~G~~ 165 (232)
.. --...+.+.+.+. +++++++++|.++..+ +.. ..|.+.+|+++.||.||.|+|..
T Consensus 184 -------------~~----~~~~~l~~~l~~~--GV~i~~~~~v~~i~~~---~~~-~~v~~~dg~~i~aD~Vv~a~G~~ 240 (410)
T 3ef6_A 184 -------------GR----RIGAWLRGLLTEL--GVQVELGTGVVGFSGE---GQL-EQVMASDGRSFVADSALICVGAE 240 (410)
T ss_dssp -------------CH----HHHHHHHHHHHHH--TCEEECSCCEEEEECS---SSC-CEEEETTSCEEECSEEEECSCEE
T ss_pred -------------CH----HHHHHHHHHHHHC--CCEEEeCCEEEEEecc---CcE-EEEEECCCCEEEcCEEEEeeCCe
Confidence 00 0012233344443 8999999999999865 343 67889999999999999999987
Q ss_pred hh
Q 044609 166 SM 167 (232)
Q Consensus 166 S~ 167 (232)
+.
T Consensus 241 p~ 242 (410)
T 3ef6_A 241 PA 242 (410)
T ss_dssp EC
T ss_pred ec
Confidence 64
No 183
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=98.74 E-value=1.1e-07 Score=76.20 Aligned_cols=100 Identities=19% Similarity=0.250 Sum_probs=74.6
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCcEEEEecCCCCcCcceeeeecccHHHHHHHcCChHHHHhhccCceeeEEEEcCCCc
Q 044609 6 EDVVIIGAGIAGLATAVALRRLGIKALVLEKSDGLRATGAALTLSPNAWLALDALGVSHKLTSVYAPAKRVFVTNLGTGA 85 (232)
Q Consensus 6 ~dV~IvG~G~~G~~~A~~L~~~g~~v~viE~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 85 (232)
.+|+|||+|..|+-+|..|++.|.+|+++|+.+.+....
T Consensus 143 ~~vvViGgG~~g~e~A~~l~~~g~~Vtvv~~~~~~~~~~----------------------------------------- 181 (404)
T 3fg2_P 143 KHVVVIGAGFIGLEFAATARAKGLEVDVVELAPRVMARV----------------------------------------- 181 (404)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTTTTT-----------------------------------------
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCEEEEEeCCCcchhhc-----------------------------------------
Confidence 579999999999999999999999999999876431100
Q ss_pred eeEEeccCCCCCCCCceeeeehHHHHHHHhhhCCCCeEEeCceEEEEEecCCCCCccEEEEeCCCcEEEccEEEecCCCc
Q 044609 86 TQELSYAGKSGRIGSGLRSVHRQSLLEALADELPDDTIQFSSKIAAIDSQTLNGSSAAIINLGDSTIIKAKVLIGCDGVH 165 (232)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~i~~~~~v~~i~~~~~~g~~~~~v~~~~g~~~~a~~vV~A~G~~ 165 (232)
. .. -....+.+.+.+. +++++++++|+++..++ +.. ..|.+.+|+++.||.||.|+|..
T Consensus 182 ---------~---~~----~~~~~l~~~l~~~--GV~i~~~~~v~~i~~~~--~~v-~~V~~~dG~~i~aD~Vv~a~G~~ 240 (404)
T 3fg2_P 182 ---------V---TP----EISSYFHDRHSGA--GIRMHYGVRATEIAAEG--DRV-TGVVLSDGNTLPCDLVVVGVGVI 240 (404)
T ss_dssp ---------S---CH----HHHHHHHHHHHHT--TCEEECSCCEEEEEEET--TEE-EEEEETTSCEEECSEEEECCCEE
T ss_pred ---------c---CH----HHHHHHHHHHHhC--CcEEEECCEEEEEEecC--CcE-EEEEeCCCCEEEcCEEEECcCCc
Confidence 0 00 0012233333332 89999999999998764 343 67889999999999999999986
Q ss_pred hh
Q 044609 166 SM 167 (232)
Q Consensus 166 S~ 167 (232)
+.
T Consensus 241 p~ 242 (404)
T 3fg2_P 241 PN 242 (404)
T ss_dssp EC
T ss_pred cC
Confidence 54
No 184
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.74 E-value=7.8e-08 Score=78.21 Aligned_cols=100 Identities=14% Similarity=0.239 Sum_probs=72.2
Q ss_pred cccEEEECCCHHHHHHHHHHHhCCCcEEEEecCCCCcCcceeeeecccHHHHHHHcCChHHHHhhccCceeeEEEEcCCC
Q 044609 5 EEDVVIIGAGIAGLATAVALRRLGIKALVLEKSDGLRATGAALTLSPNAWLALDALGVSHKLTSVYAPAKRVFVTNLGTG 84 (232)
Q Consensus 5 ~~dV~IvG~G~~G~~~A~~L~~~g~~v~viE~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~ 84 (232)
..+|+|||+|++|+-+|..|++.|.+|+++|+.+.+... .
T Consensus 170 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~------------------~---------------------- 209 (455)
T 1ebd_A 170 PKSLVVIGGGYIGIELGTAYANFGTKVTILEGAGEILSG------------------F---------------------- 209 (455)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTT------------------S----------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCccccc------------------c----------------------
Confidence 368999999999999999999999999999987644100 0
Q ss_pred ceeEEeccCCCCCCCCceeeeehHHHHHHHhhhCCCCeEEeCceEEEEEecCCCCCccEEEEeC---CCcEEEccEEEec
Q 044609 85 ATQELSYAGKSGRIGSGLRSVHRQSLLEALADELPDDTIQFSSKIAAIDSQTLNGSSAAIINLG---DSTIIKAKVLIGC 161 (232)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~i~~~~~v~~i~~~~~~g~~~~~v~~~---~g~~~~a~~vV~A 161 (232)
.. -....+.+.|.+. +++++.+++|+++..++ .. +.+.+. +++++.+|.||.|
T Consensus 210 --------------~~----~~~~~l~~~l~~~--gv~i~~~~~v~~i~~~~---~~-~~v~~~~~g~~~~~~~D~vv~a 265 (455)
T 1ebd_A 210 --------------EK----QMAAIIKKRLKKK--GVEVVTNALAKGAEERE---DG-VTVTYEANGETKTIDADYVLVT 265 (455)
T ss_dssp --------------CH----HHHHHHHHHHHHT--TCEEEESEEEEEEEEET---TE-EEEEEEETTEEEEEEESEEEEC
T ss_pred --------------CH----HHHHHHHHHHHHC--CCEEEeCCEEEEEEEeC---Ce-EEEEEEeCCceeEEEcCEEEEC
Confidence 00 0122334444443 89999999999998753 33 555543 4568999999999
Q ss_pred CCCchhh
Q 044609 162 DGVHSMV 168 (232)
Q Consensus 162 ~G~~S~~ 168 (232)
+|..+..
T Consensus 266 ~G~~p~~ 272 (455)
T 1ebd_A 266 VGRRPNT 272 (455)
T ss_dssp SCEEESC
T ss_pred cCCCccc
Confidence 9987653
No 185
>3hdq_A UDP-galactopyranose mutase; substrate and inhibitor, isomerase; HET: GDU FAD; 2.36A {Deinococcus radiodurans} PDB: 3hdy_A* 3he3_A* 3mj4_A*
Probab=98.74 E-value=1.3e-08 Score=80.99 Aligned_cols=37 Identities=30% Similarity=0.467 Sum_probs=34.5
Q ss_pred ccccEEEECCCHHHHHHHHHHHhCCCcEEEEecCCCC
Q 044609 4 VEEDVVIIGAGIAGLATAVALRRLGIKALVLEKSDGL 40 (232)
Q Consensus 4 ~~~dV~IvG~G~~G~~~A~~L~~~g~~v~viE~~~~~ 40 (232)
..+||+|||||++|+++|+.|+++|++|+|+|+.+..
T Consensus 28 ~~~dv~IIGaG~aGl~aA~~l~~~g~~v~v~E~~~~~ 64 (397)
T 3hdq_A 28 KGFDYLIVGAGFAGSVLAERLASSGQRVLIVDRRPHI 64 (397)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSS
T ss_pred CCCCEEEECccHHHHHHHHHHHHCCCceEEEeccCCC
Confidence 4589999999999999999999999999999998765
No 186
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=98.73 E-value=6.2e-08 Score=79.30 Aligned_cols=101 Identities=22% Similarity=0.279 Sum_probs=72.4
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCcEEEEecCCCCcCcceeeeecccHHHHHHHcCChHHHHhhccCceeeEEEEcCCCc
Q 044609 6 EDVVIIGAGIAGLATAVALRRLGIKALVLEKSDGLRATGAALTLSPNAWLALDALGVSHKLTSVYAPAKRVFVTNLGTGA 85 (232)
Q Consensus 6 ~dV~IvG~G~~G~~~A~~L~~~g~~v~viE~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 85 (232)
.+|+|||||+.|+-+|..|++.|.+|+++|+.+.+...- .
T Consensus 184 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~------------------~---------------------- 223 (478)
T 1v59_A 184 KRLTIIGGGIIGLEMGSVYSRLGSKVTVVEFQPQIGASM------------------D---------------------- 223 (478)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSSSS------------------C----------------------
T ss_pred ceEEEECCCHHHHHHHHHHHHcCCEEEEEEeCCcccccc------------------C----------------------
Confidence 589999999999999999999999999999976542110 0
Q ss_pred eeEEeccCCCCCCCCceeeeehHHHHHHHhhhCCCCeEEeCceEEEEEecCCCCCccEEEEeC-----CCcEEEccEEEe
Q 044609 86 TQELSYAGKSGRIGSGLRSVHRQSLLEALADELPDDTIQFSSKIAAIDSQTLNGSSAAIINLG-----DSTIIKAKVLIG 160 (232)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~i~~~~~v~~i~~~~~~g~~~~~v~~~-----~g~~~~a~~vV~ 160 (232)
.-....+.+.|.+. +++++++++|+++..+++ +.. +.+.+. +++++.+|.||.
T Consensus 224 ------------------~~~~~~l~~~l~~~--gv~i~~~~~v~~i~~~~~-~~~-~~v~~~~~~~g~~~~~~~D~vv~ 281 (478)
T 1v59_A 224 ------------------GEVAKATQKFLKKQ--GLDFKLSTKVISAKRNDD-KNV-VEIVVEDTKTNKQENLEAEVLLV 281 (478)
T ss_dssp ------------------HHHHHHHHHHHHHT--TCEEECSEEEEEEEEETT-TTE-EEEEEEETTTTEEEEEEESEEEE
T ss_pred ------------------HHHHHHHHHHHHHC--CCEEEeCCEEEEEEEecC-CCe-EEEEEEEcCCCCceEEECCEEEE
Confidence 00112333444433 899999999999986211 343 555554 346899999999
Q ss_pred cCCCchhh
Q 044609 161 CDGVHSMV 168 (232)
Q Consensus 161 A~G~~S~~ 168 (232)
|+|..+..
T Consensus 282 a~G~~p~~ 289 (478)
T 1v59_A 282 AVGRRPYI 289 (478)
T ss_dssp CSCEEECC
T ss_pred CCCCCcCC
Confidence 99987654
No 187
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=98.72 E-value=1.6e-08 Score=79.73 Aligned_cols=37 Identities=35% Similarity=0.591 Sum_probs=34.1
Q ss_pred ccccEEEECCCHHHHHHHHHHHhCCCcEEEEecC-CCC
Q 044609 4 VEEDVVIIGAGIAGLATAVALRRLGIKALVLEKS-DGL 40 (232)
Q Consensus 4 ~~~dV~IvG~G~~G~~~A~~L~~~g~~v~viE~~-~~~ 40 (232)
..+||+|||||++|+++|+.|+++|++|+|+|+. +.+
T Consensus 43 ~~~~V~IIGAGiaGL~aA~~L~~~G~~V~VlE~~~~~v 80 (376)
T 2e1m_A 43 PPKRILIVGAGIAGLVAGDLLTRAGHDVTILEANANRV 80 (376)
T ss_dssp SCCEEEEECCBHHHHHHHHHHHHTSCEEEEECSCSSCC
T ss_pred CCceEEEECCCHHHHHHHHHHHHCCCcEEEEecccccc
Confidence 4579999999999999999999999999999998 654
No 188
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=98.72 E-value=1.4e-07 Score=77.44 Aligned_cols=100 Identities=13% Similarity=0.123 Sum_probs=75.4
Q ss_pred ccEEEECCCHHHHHHHHHHHhC---CCcEEEEecCCCCcCcceeeeecccHHHHHHHcCChHHHHhhccCceeeEEEEcC
Q 044609 6 EDVVIIGAGIAGLATAVALRRL---GIKALVLEKSDGLRATGAALTLSPNAWLALDALGVSHKLTSVYAPAKRVFVTNLG 82 (232)
Q Consensus 6 ~dV~IvG~G~~G~~~A~~L~~~---g~~v~viE~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~ 82 (232)
.+++|||+|..|+-+|..|++. |.+|+++|+.+.+-.. +
T Consensus 188 ~~vvViGgG~ig~E~A~~l~~~~~~g~~Vtlv~~~~~~l~~------------------~-------------------- 229 (490)
T 1fec_A 188 KRALCVGGGYISIEFAGIFNAYKARGGQVDLAYRGDMILRG------------------F-------------------- 229 (490)
T ss_dssp SEEEEECSSHHHHHHHHHHHHHSCTTCEEEEEESSSSSSTT------------------S--------------------
T ss_pred CeEEEECCCHHHHHHHHHHHhhccCcCeEEEEEcCCCcccc------------------c--------------------
Confidence 5899999999999999999998 9999999987643110 0
Q ss_pred CCceeEEeccCCCCCCCCceeeeehHHHHHHHhhhCCCCeEEeCceEEEEEecCCCCCccEEEEeCCCcEEEccEEEecC
Q 044609 83 TGATQELSYAGKSGRIGSGLRSVHRQSLLEALADELPDDTIQFSSKIAAIDSQTLNGSSAAIINLGDSTIIKAKVLIGCD 162 (232)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~i~~~~~v~~i~~~~~~g~~~~~v~~~~g~~~~a~~vV~A~ 162 (232)
.. -....+.+.|.+. +++++++++|+++..++ +.. +.|.+.+|+++.||.||.|+
T Consensus 230 ----------------d~----~~~~~l~~~l~~~--GV~i~~~~~v~~i~~~~--~~~-~~v~~~~G~~i~~D~vv~a~ 284 (490)
T 1fec_A 230 ----------------DS----ELRKQLTEQLRAN--GINVRTHENPAKVTKNA--DGT-RHVVFESGAEADYDVVMLAI 284 (490)
T ss_dssp ----------------CH----HHHHHHHHHHHHT--TEEEEETCCEEEEEECT--TSC-EEEEETTSCEEEESEEEECS
T ss_pred ----------------CH----HHHHHHHHHHHhC--CCEEEeCCEEEEEEEcC--CCE-EEEEECCCcEEEcCEEEEcc
Confidence 00 0012334444443 89999999999998764 233 67888899889999999999
Q ss_pred CCchhh
Q 044609 163 GVHSMV 168 (232)
Q Consensus 163 G~~S~~ 168 (232)
|..+..
T Consensus 285 G~~p~~ 290 (490)
T 1fec_A 285 GRVPRS 290 (490)
T ss_dssp CEEESC
T ss_pred CCCcCc
Confidence 987654
No 189
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=98.72 E-value=1.5e-07 Score=77.31 Aligned_cols=100 Identities=14% Similarity=0.169 Sum_probs=75.3
Q ss_pred ccEEEECCCHHHHHHHHHHHhC---CCcEEEEecCCCCcCcceeeeecccHHHHHHHcCChHHHHhhccCceeeEEEEcC
Q 044609 6 EDVVIIGAGIAGLATAVALRRL---GIKALVLEKSDGLRATGAALTLSPNAWLALDALGVSHKLTSVYAPAKRVFVTNLG 82 (232)
Q Consensus 6 ~dV~IvG~G~~G~~~A~~L~~~---g~~v~viE~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~ 82 (232)
.+|+|||+|..|+-+|..|++. |.+|+++|+.+.+-.. +..
T Consensus 192 ~~vvViGgG~ig~E~A~~l~~~~~~g~~Vtlv~~~~~~l~~------------------~d~------------------ 235 (495)
T 2wpf_A 192 RRVLTVGGGFISVEFAGIFNAYKPPGGKVTLCYRNNLILRG------------------FDE------------------ 235 (495)
T ss_dssp SEEEEECSSHHHHHHHHHHHHHCCTTCEEEEEESSSSSCTT------------------SCH------------------
T ss_pred CeEEEECCCHHHHHHHHHHHhhCCCCCeEEEEEcCCccccc------------------cCH------------------
Confidence 5899999999999999999998 9999999987643110 000
Q ss_pred CCceeEEeccCCCCCCCCceeeeehHHHHHHHhhhCCCCeEEeCceEEEEEecCCCCCccEEEEeCCCcEEEccEEEecC
Q 044609 83 TGATQELSYAGKSGRIGSGLRSVHRQSLLEALADELPDDTIQFSSKIAAIDSQTLNGSSAAIINLGDSTIIKAKVLIGCD 162 (232)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~i~~~~~v~~i~~~~~~g~~~~~v~~~~g~~~~a~~vV~A~ 162 (232)
-....+.+.|.+. +++++++++|+++..++ +.. +.|.+.+|+++.||.||.|+
T Consensus 236 ----------------------~~~~~l~~~l~~~--GV~i~~~~~v~~i~~~~--~~~-~~v~~~~G~~i~~D~vv~a~ 288 (495)
T 2wpf_A 236 ----------------------TIREEVTKQLTAN--GIEIMTNENPAKVSLNT--DGS-KHVTFESGKTLDVDVVMMAI 288 (495)
T ss_dssp ----------------------HHHHHHHHHHHHT--TCEEEESCCEEEEEECT--TSC-EEEEETTSCEEEESEEEECS
T ss_pred ----------------------HHHHHHHHHHHhC--CCEEEeCCEEEEEEEcC--Cce-EEEEECCCcEEEcCEEEECC
Confidence 0012334444443 89999999999998754 233 67888899899999999999
Q ss_pred CCchhh
Q 044609 163 GVHSMV 168 (232)
Q Consensus 163 G~~S~~ 168 (232)
|.....
T Consensus 289 G~~p~~ 294 (495)
T 2wpf_A 289 GRIPRT 294 (495)
T ss_dssp CEEECC
T ss_pred CCcccc
Confidence 987654
No 190
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=98.71 E-value=1.2e-07 Score=76.68 Aligned_cols=100 Identities=14% Similarity=0.200 Sum_probs=73.6
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCcEEEEecCCCCcCcceeeeecccHHHHHHHcCChHHHHhhccCceeeEEEEcCCCc
Q 044609 6 EDVVIIGAGIAGLATAVALRRLGIKALVLEKSDGLRATGAALTLSPNAWLALDALGVSHKLTSVYAPAKRVFVTNLGTGA 85 (232)
Q Consensus 6 ~dV~IvG~G~~G~~~A~~L~~~g~~v~viE~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 85 (232)
.+|+|||+|+.|+-+|..|++.|.+|+++|+.+.+-...
T Consensus 150 ~~vvViGgG~~g~E~A~~l~~~G~~Vtlv~~~~~~l~~~----------------------------------------- 188 (431)
T 1q1r_A 150 NRLVVIGGGYIGLEVAATAIKANMHVTLLDTAARVLERV----------------------------------------- 188 (431)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTTTTT-----------------------------------------
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCEEEEEEeCCccccch-----------------------------------------
Confidence 589999999999999999999999999999865431100
Q ss_pred eeEEeccCCCCCCCCceeeeehHHHHHHHhhhCCCCeEEeCceEEEEEe--cCCCCCccEEEEeCCCcEEEccEEEecCC
Q 044609 86 TQELSYAGKSGRIGSGLRSVHRQSLLEALADELPDDTIQFSSKIAAIDS--QTLNGSSAAIINLGDSTIIKAKVLIGCDG 163 (232)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~i~~~~~v~~i~~--~~~~g~~~~~v~~~~g~~~~a~~vV~A~G 163 (232)
. .. --...+.+.+.+. |++++++++|+++.. ++ +.. ..|.+.+|+++.||.||.|+|
T Consensus 189 ---------~---~~----~~~~~l~~~l~~~--GV~i~~~~~v~~i~~~~~~--~~v-~~v~~~~G~~i~~D~Vv~a~G 247 (431)
T 1q1r_A 189 ---------T---AP----PVSAFYEHLHREA--GVDIRTGTQVCGFEMSTDQ--QKV-TAVLCEDGTRLPADLVIAGIG 247 (431)
T ss_dssp ---------S---CH----HHHHHHHHHHHHH--TCEEECSCCEEEEEECTTT--CCE-EEEEETTSCEEECSEEEECCC
T ss_pred ---------h---hH----HHHHHHHHHHHhC--CeEEEeCCEEEEEEeccCC--CcE-EEEEeCCCCEEEcCEEEECCC
Confidence 0 00 0012233444433 899999999999986 32 343 478888999999999999999
Q ss_pred Cchh
Q 044609 164 VHSM 167 (232)
Q Consensus 164 ~~S~ 167 (232)
..+.
T Consensus 248 ~~p~ 251 (431)
T 1q1r_A 248 LIPN 251 (431)
T ss_dssp EEEC
T ss_pred CCcC
Confidence 7653
No 191
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=98.69 E-value=8e-08 Score=79.02 Aligned_cols=34 Identities=12% Similarity=0.290 Sum_probs=31.7
Q ss_pred cccEEEECCCHHHHHHHHHHHhCCCcEEEEecCC
Q 044609 5 EEDVVIIGAGIAGLATAVALRRLGIKALVLEKSD 38 (232)
Q Consensus 5 ~~dV~IvG~G~~G~~~A~~L~~~g~~v~viE~~~ 38 (232)
+++|+|||||++|+++|..|++.+++|+|||+++
T Consensus 42 KprVVIIGgG~AGl~~A~~L~~~~~~VtLId~~~ 75 (502)
T 4g6h_A 42 KPNVLILGSGWGAISFLKHIDTKKYNVSIISPRS 75 (502)
T ss_dssp SCEEEEECSSHHHHHHHHHSCTTTCEEEEEESSS
T ss_pred CCCEEEECCcHHHHHHHHHhhhCCCcEEEECCCC
Confidence 4689999999999999999999999999999875
No 192
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=98.68 E-value=2.4e-07 Score=76.18 Aligned_cols=99 Identities=14% Similarity=0.252 Sum_probs=74.9
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCcEEEEecCCCCcCcceeeeecccHHHHHHHcCChHHHHhhccCceeeEEEEcCCCc
Q 044609 6 EDVVIIGAGIAGLATAVALRRLGIKALVLEKSDGLRATGAALTLSPNAWLALDALGVSHKLTSVYAPAKRVFVTNLGTGA 85 (232)
Q Consensus 6 ~dV~IvG~G~~G~~~A~~L~~~g~~v~viE~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 85 (232)
.+++|||+|..|+-+|..|++.|.+|+++|+.+.+-.. +
T Consensus 183 ~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~~-----~------------------------------------ 221 (499)
T 1xdi_A 183 DHLIVVGSGVTGAEFVDAYTELGVPVTVVASQDHVLPY-----E------------------------------------ 221 (499)
T ss_dssp SSEEEESCSHHHHHHHHHHHHTTCCEEEECSSSSSSCC-----S------------------------------------
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCeEEEEEcCCccccc-----c------------------------------------
Confidence 58999999999999999999999999999987643110 0
Q ss_pred eeEEeccCCCCCCCCceeeeehHHHHHHHhhhCCCCeEEeCceEEEEEecCCCCCccEEEEeCCCcEEEccEEEecCCCc
Q 044609 86 TQELSYAGKSGRIGSGLRSVHRQSLLEALADELPDDTIQFSSKIAAIDSQTLNGSSAAIINLGDSTIIKAKVLIGCDGVH 165 (232)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~i~~~~~v~~i~~~~~~g~~~~~v~~~~g~~~~a~~vV~A~G~~ 165 (232)
.. -....+.+.|.+. |++++.+++|+++..++ .. +.+.+.+|+++.||.||.|.|..
T Consensus 222 -------------d~----~~~~~l~~~l~~~--GV~i~~~~~V~~i~~~~---~~-v~v~~~~g~~i~aD~Vv~a~G~~ 278 (499)
T 1xdi_A 222 -------------DA----DAALVLEESFAER--GVRLFKNARAASVTRTG---AG-VLVTMTDGRTVEGSHALMTIGSV 278 (499)
T ss_dssp -------------SH----HHHHHHHHHHHHT--TCEEETTCCEEEEEECS---SS-EEEEETTSCEEEESEEEECCCEE
T ss_pred -------------CH----HHHHHHHHHHHHC--CCEEEeCCEEEEEEEeC---CE-EEEEECCCcEEEcCEEEECCCCC
Confidence 00 0112234444433 89999999999998753 33 67778888899999999999998
Q ss_pred hhh
Q 044609 166 SMV 168 (232)
Q Consensus 166 S~~ 168 (232)
++.
T Consensus 279 p~~ 281 (499)
T 1xdi_A 279 PNT 281 (499)
T ss_dssp ECC
T ss_pred cCC
Confidence 753
No 193
>4dsg_A UDP-galactopyranose mutase; rossmann fold, flavin adenine dinucleotide, isomerase; HET: FAD UDP; 2.25A {Trypanosoma cruzi} PDB: 4dsh_A*
Probab=98.67 E-value=2.6e-08 Score=81.59 Aligned_cols=38 Identities=39% Similarity=0.514 Sum_probs=34.7
Q ss_pred ccccEEEECCCHHHHHHHHHHHhCC-CcEEEEecCCCCc
Q 044609 4 VEEDVVIIGAGIAGLATAVALRRLG-IKALVLEKSDGLR 41 (232)
Q Consensus 4 ~~~dV~IvG~G~~G~~~A~~L~~~g-~~v~viE~~~~~~ 41 (232)
+.+||+|||||++|+++|+.|+++| .+|+|+|+.+.++
T Consensus 8 ~~~~v~iiG~G~~Gl~~A~~l~~~g~~~v~v~E~~~~~G 46 (484)
T 4dsg_A 8 LTPKIVIIGAGPTGLGAAVRLTELGYKNWHLYECNDTPG 46 (484)
T ss_dssp CSCCEEEECCSHHHHHHHHHHHHTTCCSEEEEESSSSSS
T ss_pred cCCCEEEECcCHHHHHHHHHHHHcCCCCEEEEeCCCCCC
Confidence 4589999999999999999999998 7999999998663
No 194
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=98.67 E-value=2.9e-08 Score=78.95 Aligned_cols=37 Identities=22% Similarity=0.502 Sum_probs=34.2
Q ss_pred cccEEEECCCHHHHHHHHHHHhCCCcEEEEecCCCCc
Q 044609 5 EEDVVIIGAGIAGLATAVALRRLGIKALVLEKSDGLR 41 (232)
Q Consensus 5 ~~dV~IvG~G~~G~~~A~~L~~~g~~v~viE~~~~~~ 41 (232)
++||+|||||++|+++|..|+++|++|+|+|+++.++
T Consensus 3 ~~~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~~~~G 39 (384)
T 2bi7_A 3 SKKILIVGAGFSGAVIGRQLAEKGHQVHIIDQRDHIG 39 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSSS
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCcEEEEEecCCcC
Confidence 4799999999999999999999999999999987653
No 195
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=98.67 E-value=1.9e-08 Score=82.39 Aligned_cols=35 Identities=37% Similarity=0.556 Sum_probs=32.8
Q ss_pred ccccEEEECCCHHHHHHHHHHHhCCCcEEEEecCC
Q 044609 4 VEEDVVIIGAGIAGLATAVALRRLGIKALVLEKSD 38 (232)
Q Consensus 4 ~~~dV~IvG~G~~G~~~A~~L~~~g~~v~viE~~~ 38 (232)
+++||+|||||++|+++|..|++.|++|+|||++.
T Consensus 19 ~~~dVvIIGgG~aGl~aA~~la~~G~~V~liE~~~ 53 (478)
T 3dk9_A 19 ASYDYLVIGGGSGGLASARRAAELGARAAVVESHK 53 (478)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCeEEEEecCC
Confidence 46899999999999999999999999999999874
No 196
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=98.65 E-value=1.2e-07 Score=77.61 Aligned_cols=99 Identities=19% Similarity=0.245 Sum_probs=73.0
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCcEEEEecCCCCcCcceeeeecccHHHHHHHcCChHHHHhhccCceeeEEEEcCCCc
Q 044609 6 EDVVIIGAGIAGLATAVALRRLGIKALVLEKSDGLRATGAALTLSPNAWLALDALGVSHKLTSVYAPAKRVFVTNLGTGA 85 (232)
Q Consensus 6 ~dV~IvG~G~~G~~~A~~L~~~g~~v~viE~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 85 (232)
.+|+|||||..|+-+|..|++.|.+|+++|+.+.+-.. +..
T Consensus 186 ~~vvViGgG~ig~E~A~~l~~~G~~Vtlv~~~~~~l~~------------------~~~--------------------- 226 (482)
T 1ojt_A 186 GKLLIIGGGIIGLEMGTVYSTLGSRLDVVEMMDGLMQG------------------ADR--------------------- 226 (482)
T ss_dssp SEEEEESCSHHHHHHHHHHHHHTCEEEEECSSSSSSTT------------------SCH---------------------
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCeEEEEEECCccccc------------------cCH---------------------
Confidence 58999999999999999999999999999987643110 000
Q ss_pred eeEEeccCCCCCCCCceeeeehHHHHHHHhhhCCCCeEEeCceEEEEEecCCCCCccEEEEeCC----CcEEEccEEEec
Q 044609 86 TQELSYAGKSGRIGSGLRSVHRQSLLEALADELPDDTIQFSSKIAAIDSQTLNGSSAAIINLGD----STIIKAKVLIGC 161 (232)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~i~~~~~v~~i~~~~~~g~~~~~v~~~~----g~~~~a~~vV~A 161 (232)
-....+.+.|.+. +++++++++|.++..++ .. +.+.+.+ |+++.+|.||.|
T Consensus 227 -------------------~~~~~l~~~l~~~--gV~i~~~~~v~~i~~~~---~~-~~v~~~~~~~~g~~~~~D~vv~a 281 (482)
T 1ojt_A 227 -------------------DLVKVWQKQNEYR--FDNIMVNTKTVAVEPKE---DG-VYVTFEGANAPKEPQRYDAVLVA 281 (482)
T ss_dssp -------------------HHHHHHHHHHGGG--EEEEECSCEEEEEEEET---TE-EEEEEESSSCCSSCEEESCEEEC
T ss_pred -------------------HHHHHHHHHHHhc--CCEEEECCEEEEEEEcC---Ce-EEEEEeccCCCceEEEcCEEEEC
Confidence 0012334444443 78999999999998753 33 5566665 677999999999
Q ss_pred CCCchhh
Q 044609 162 DGVHSMV 168 (232)
Q Consensus 162 ~G~~S~~ 168 (232)
+|..++.
T Consensus 282 ~G~~p~~ 288 (482)
T 1ojt_A 282 AGRAPNG 288 (482)
T ss_dssp CCEEECG
T ss_pred cCCCcCC
Confidence 9987654
No 197
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=98.64 E-value=2.6e-08 Score=81.26 Aligned_cols=38 Identities=32% Similarity=0.605 Sum_probs=33.1
Q ss_pred CCcc-cccEEEECCCHHHHHHHHHHHhCCCcEEEEecCC
Q 044609 1 MEMV-EEDVVIIGAGIAGLATAVALRRLGIKALVLEKSD 38 (232)
Q Consensus 1 m~~~-~~dV~IvG~G~~G~~~A~~L~~~g~~v~viE~~~ 38 (232)
|.+| ++||+|||||++|+++|..|++.|++|+|||+.+
T Consensus 1 m~~m~~~dvvIIG~G~aG~~aA~~l~~~g~~V~lie~~~ 39 (464)
T 2eq6_A 1 MTPMKTYDLIVIGTGPGGYHAAIRAAQLGLKVLAVEAGE 39 (464)
T ss_dssp ---CEEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred CCCcccCCEEEECcCHHHHHHHHHHHHCCCeEEEEeCCC
Confidence 4444 5999999999999999999999999999999976
No 198
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=98.63 E-value=4.2e-07 Score=74.31 Aligned_cols=100 Identities=20% Similarity=0.369 Sum_probs=72.0
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCcEEEEecCCCCcCcceeeeecccHHHHHHHcCChHHHHhhccCceeeEEEEcCCCc
Q 044609 6 EDVVIIGAGIAGLATAVALRRLGIKALVLEKSDGLRATGAALTLSPNAWLALDALGVSHKLTSVYAPAKRVFVTNLGTGA 85 (232)
Q Consensus 6 ~dV~IvG~G~~G~~~A~~L~~~g~~v~viE~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 85 (232)
.+|+|||+|+.|+-+|..|++.|.+|+++|+.+.+....
T Consensus 179 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~----------------------------------------- 217 (474)
T 1zmd_A 179 EKMVVIGAGVIGVELGSVWQRLGADVTAVEFLGHVGGVG----------------------------------------- 217 (474)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSCSS-----------------------------------------
T ss_pred ceEEEECCCHHHHHHHHHHHHcCCEEEEEeccCccCCcc-----------------------------------------
Confidence 589999999999999999999999999999876542100
Q ss_pred eeEEeccCCCCCCCCceeeeehHHHHHHHhhhCCCCeEEeCceEEEEEecCCCCCccEEEE-----eCCCcEEEccEEEe
Q 044609 86 TQELSYAGKSGRIGSGLRSVHRQSLLEALADELPDDTIQFSSKIAAIDSQTLNGSSAAIIN-----LGDSTIIKAKVLIG 160 (232)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~i~~~~~v~~i~~~~~~g~~~~~v~-----~~~g~~~~a~~vV~ 160 (232)
+ .. -....+.+.|.+. +++++++++|+++..++ +.. +.+. ..+++++.+|.||.
T Consensus 218 -----~-------~~----~~~~~l~~~l~~~--Gv~i~~~~~v~~i~~~~--~~~-~~v~~~~~~~~~~~~i~~D~vv~ 276 (474)
T 1zmd_A 218 -----I-------DM----EISKNFQRILQKQ--GFKFKLNTKVTGATKKS--DGK-IDVSIEAASGGKAEVITCDVLLV 276 (474)
T ss_dssp -----C-------CH----HHHHHHHHHHHHT--TCEEECSEEEEEEEECT--TSC-EEEEEEETTSCCCEEEEESEEEE
T ss_pred -----c-------CH----HHHHHHHHHHHHC--CCEEEeCceEEEEEEcC--Cce-EEEEEEecCCCCceEEEcCEEEE
Confidence 0 00 0012334444433 89999999999998764 232 4444 24567899999999
Q ss_pred cCCCchh
Q 044609 161 CDGVHSM 167 (232)
Q Consensus 161 A~G~~S~ 167 (232)
|+|..+.
T Consensus 277 a~G~~p~ 283 (474)
T 1zmd_A 277 CIGRRPF 283 (474)
T ss_dssp CSCEEEC
T ss_pred CcCCCcC
Confidence 9998764
No 199
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=98.63 E-value=3.8e-07 Score=76.20 Aligned_cols=100 Identities=22% Similarity=0.390 Sum_probs=73.2
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCcEEEEecCCCCcCcceeeeecccHHHHHHHcCChHHHHhhccCceeeEEEEcCCCc
Q 044609 6 EDVVIIGAGIAGLATAVALRRLGIKALVLEKSDGLRATGAALTLSPNAWLALDALGVSHKLTSVYAPAKRVFVTNLGTGA 85 (232)
Q Consensus 6 ~dV~IvG~G~~G~~~A~~L~~~g~~v~viE~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 85 (232)
.+|+|||+|..|+-+|..|++.|.+|+++++.+..... ...
T Consensus 152 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~------------------~~~--------------------- 192 (565)
T 3ntd_A 152 EHATVVGGGFIGLEMMESLHHLGIKTTLLELADQVMTP------------------VDR--------------------- 192 (565)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSCTT------------------SCH---------------------
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCcEEEEEcCCccchh------------------cCH---------------------
Confidence 48999999999999999999999999999987643110 000
Q ss_pred eeEEeccCCCCCCCCceeeeehHHHHHHHhhhCCCCeEEeCceEEEEEecC-----------------CCCCccEEEEeC
Q 044609 86 TQELSYAGKSGRIGSGLRSVHRQSLLEALADELPDDTIQFSSKIAAIDSQT-----------------LNGSSAAIINLG 148 (232)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~i~~~~~v~~i~~~~-----------------~~g~~~~~v~~~ 148 (232)
-....+.+.|.+. +++++++++|.++..+. + +.. +.+.+.
T Consensus 193 -------------------~~~~~l~~~l~~~--GV~i~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~-~~~-~~v~~~ 249 (565)
T 3ntd_A 193 -------------------EMAGFAHQAIRDQ--GVDLRLGTALSEVSYQVQTHVASDAAGEDTAHQHI-KGH-LSLTLS 249 (565)
T ss_dssp -------------------HHHHHHHHHHHHT--TCEEEETCCEEEEEEECCCCCCCGGGTCCCTTCCT-TCE-EEEEET
T ss_pred -------------------HHHHHHHHHHHHC--CCEEEeCCeEEEEeccccccccccccccccccccC-CCc-EEEEEc
Confidence 0022233444433 88999999999997630 1 233 667788
Q ss_pred CCcEEEccEEEecCCCchh
Q 044609 149 DSTIIKAKVLIGCDGVHSM 167 (232)
Q Consensus 149 ~g~~~~a~~vV~A~G~~S~ 167 (232)
+|+++.||.||.|+|..+.
T Consensus 250 ~g~~i~~D~vi~a~G~~p~ 268 (565)
T 3ntd_A 250 NGELLETDLLIMAIGVRPE 268 (565)
T ss_dssp TSCEEEESEEEECSCEEEC
T ss_pred CCCEEEcCEEEECcCCccc
Confidence 8989999999999998764
No 200
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=98.62 E-value=3.2e-07 Score=75.91 Aligned_cols=102 Identities=15% Similarity=0.236 Sum_probs=74.5
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCcEEEEecCCCCcCcceeeeecccHHHHHHHcCChHHHHhhccCceeeEEEEcCCCc
Q 044609 6 EDVVIIGAGIAGLATAVALRRLGIKALVLEKSDGLRATGAALTLSPNAWLALDALGVSHKLTSVYAPAKRVFVTNLGTGA 85 (232)
Q Consensus 6 ~dV~IvG~G~~G~~~A~~L~~~g~~v~viE~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 85 (232)
.+|+|||+|..|+-+|..|++.|.+|+++|+.+.+... +
T Consensus 215 ~~vvViGgG~~g~E~A~~l~~~G~~Vtlv~~~~~~l~~------------------~----------------------- 253 (523)
T 1mo9_A 215 STVVVVGGSKTAVEYGCFFNATGRRTVMLVRTEPLKLI------------------K----------------------- 253 (523)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCTTTTC------------------C-----------------------
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCeEEEEEecCccccc------------------c-----------------------
Confidence 68999999999999999999999999999987643100 0
Q ss_pred eeEEeccCCCCCCCCceeeeehHHHHHHHhhhCCCCeEEeCceEEEEEecCCCCCc-cEEEEeCCCc-EEEccEEEecCC
Q 044609 86 TQELSYAGKSGRIGSGLRSVHRQSLLEALADELPDDTIQFSSKIAAIDSQTLNGSS-AAIINLGDST-IIKAKVLIGCDG 163 (232)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~i~~~~~v~~i~~~~~~g~~-~~~v~~~~g~-~~~a~~vV~A~G 163 (232)
.. -....+.+.|.+. |++++++++|+++..+++ +.. .+.|.+.+|+ ++.||.||.|+|
T Consensus 254 -------------~~----~~~~~l~~~l~~~--GV~i~~~~~V~~i~~~~~-~~v~~~~v~~~~G~~~i~aD~Vv~A~G 313 (523)
T 1mo9_A 254 -------------DN----ETRAYVLDRMKEQ--GMEIISGSNVTRIEEDAN-GRVQAVVAMTPNGEMRIETDFVFLGLG 313 (523)
T ss_dssp -------------SH----HHHHHHHHHHHHT--TCEEESSCEEEEEEECTT-SBEEEEEEEETTEEEEEECSCEEECCC
T ss_pred -------------cH----HHHHHHHHHHHhC--CcEEEECCEEEEEEEcCC-CceEEEEEEECCCcEEEEcCEEEECcC
Confidence 00 0022334444443 899999999999987532 210 0457778887 899999999999
Q ss_pred Cchhh
Q 044609 164 VHSMV 168 (232)
Q Consensus 164 ~~S~~ 168 (232)
..+..
T Consensus 314 ~~p~~ 318 (523)
T 1mo9_A 314 EQPRS 318 (523)
T ss_dssp CEECC
T ss_pred CccCC
Confidence 98754
No 201
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=98.62 E-value=2.6e-07 Score=75.51 Aligned_cols=106 Identities=26% Similarity=0.396 Sum_probs=76.6
Q ss_pred ccEEEECCCHHHHHHHHHHHhC-CCcEEEEecCCCCcCcceeeeecccHHHHHHHcCChHHHHhhccCceeeEEEEcCCC
Q 044609 6 EDVVIIGAGIAGLATAVALRRL-GIKALVLEKSDGLRATGAALTLSPNAWLALDALGVSHKLTSVYAPAKRVFVTNLGTG 84 (232)
Q Consensus 6 ~dV~IvG~G~~G~~~A~~L~~~-g~~v~viE~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~ 84 (232)
.+|+|||+|..|+-+|..|++. |.+|+++++.+.+....
T Consensus 160 ~~vvViGgG~~g~e~A~~l~~~~g~~Vtlv~~~~~~l~~~---------------------------------------- 199 (472)
T 3iwa_A 160 SKAVIVGGGFIGLEMAVSLADMWGIDTTVVELADQIMPGF---------------------------------------- 199 (472)
T ss_dssp SEEEEECCSHHHHHHHHHHHHHHCCEEEEECSSSSSSTTT----------------------------------------
T ss_pred CEEEEECCCHHHHHHHHHHHHhcCCcEEEEEccCcccccc----------------------------------------
Confidence 5899999999999999999999 99999999875431100
Q ss_pred ceeEEeccCCCCCCCCceeeeehHHHHHHHhhhCCCCeEEeCceEEEEEecCCCCCccEEEEeCCCcEEEccEEEecCCC
Q 044609 85 ATQELSYAGKSGRIGSGLRSVHRQSLLEALADELPDDTIQFSSKIAAIDSQTLNGSSAAIINLGDSTIIKAKVLIGCDGV 164 (232)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~i~~~~~v~~i~~~~~~g~~~~~v~~~~g~~~~a~~vV~A~G~ 164 (232)
. .+ -....+.+.+.+. +++++.+++|++++.++ +. +.+.+.+|+++.||.||.|+|.
T Consensus 200 ----------~---~~----~~~~~l~~~l~~~--GV~i~~~~~v~~i~~~~--~~--v~v~~~~g~~i~aD~Vv~a~G~ 256 (472)
T 3iwa_A 200 ----------T---SK----SLSQMLRHDLEKN--DVVVHTGEKVVRLEGEN--GK--VARVITDKRTLDADLVILAAGV 256 (472)
T ss_dssp ----------S---CH----HHHHHHHHHHHHT--TCEEECSCCEEEEEESS--SB--EEEEEESSCEEECSEEEECSCE
T ss_pred ----------c---CH----HHHHHHHHHHHhc--CCEEEeCCEEEEEEccC--Ce--EEEEEeCCCEEEcCEEEECCCC
Confidence 0 00 0122333444432 89999999999998753 33 6677888989999999999998
Q ss_pred chh--hhhhhcC
Q 044609 165 HSM--VAQWLGL 174 (232)
Q Consensus 165 ~S~--~r~~~~~ 174 (232)
.+. +.+.+++
T Consensus 257 ~p~~~l~~~~gl 268 (472)
T 3iwa_A 257 SPNTQLARDAGL 268 (472)
T ss_dssp EECCHHHHHHTC
T ss_pred CcCHHHHHhCCc
Confidence 753 3344443
No 202
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=98.62 E-value=5.3e-08 Score=78.68 Aligned_cols=39 Identities=21% Similarity=0.319 Sum_probs=35.5
Q ss_pred ccccEEEECCCHHHHHHHHHHHhCCCcEEEEecCCCCcC
Q 044609 4 VEEDVVIIGAGIAGLATAVALRRLGIKALVLEKSDGLRA 42 (232)
Q Consensus 4 ~~~dV~IvG~G~~G~~~A~~L~~~g~~v~viE~~~~~~~ 42 (232)
.++||+|||+|++|+++|..|+++|++|+++|+++.++.
T Consensus 5 ~~~~v~iiG~G~~gl~~a~~l~~~g~~v~~~e~~~~~gg 43 (433)
T 1d5t_A 5 EEYDVIVLGTGLTECILSGIMSVNGKKVLHMDRNPYYGG 43 (433)
T ss_dssp SBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCT
T ss_pred CcCCEEEECcCHHHHHHHHHHHHCCCcEEEEecCCCccc
Confidence 458999999999999999999999999999999877643
No 203
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=98.62 E-value=7.3e-08 Score=79.24 Aligned_cols=38 Identities=42% Similarity=0.587 Sum_probs=34.9
Q ss_pred cccEEEECCCHHHHHHHHHHHhCCCcEEEEecCCCCcC
Q 044609 5 EEDVVIIGAGIAGLATAVALRRLGIKALVLEKSDGLRA 42 (232)
Q Consensus 5 ~~dV~IvG~G~~G~~~A~~L~~~g~~v~viE~~~~~~~ 42 (232)
.+||+|||||++|+++|..|++.|++|+|+|+.+.++.
T Consensus 33 ~~~v~IiGaG~~Gl~aA~~l~~~g~~v~vlE~~~~~gg 70 (498)
T 2iid_A 33 PKHVVIVGAGMAGLSAAYVLAGAGHQVTVLEASERPGG 70 (498)
T ss_dssp CCEEEEECCBHHHHHHHHHHHHHTCEEEEECSSSSSBT
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCeEEEEECCCCCCC
Confidence 57999999999999999999999999999999887643
No 204
>1i8t_A UDP-galactopyranose mutase; rossman fold, FAD, contractase, isomerase; HET: FAD; 2.40A {Escherichia coli} SCOP: c.4.1.3 d.16.1.7
Probab=98.61 E-value=3.7e-08 Score=77.89 Aligned_cols=36 Identities=36% Similarity=0.607 Sum_probs=33.5
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCcEEEEecCCCCc
Q 044609 6 EDVVIIGAGIAGLATAVALRRLGIKALVLEKSDGLR 41 (232)
Q Consensus 6 ~dV~IvG~G~~G~~~A~~L~~~g~~v~viE~~~~~~ 41 (232)
+||+|||||++|+++|+.|+++|++|+|+|+.+.++
T Consensus 2 ~~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~~~~G 37 (367)
T 1i8t_A 2 YDYIIVGSGLFGAVCANELKKLNKKVLVIEKRNHIG 37 (367)
T ss_dssp EEEEEECCSHHHHHHHHHHGGGTCCEEEECSSSSSS
T ss_pred CCEEEECcCHHHHHHHHHHHhCCCcEEEEecCCCCC
Confidence 699999999999999999999999999999987653
No 205
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=98.61 E-value=4.3e-07 Score=74.12 Aligned_cols=99 Identities=21% Similarity=0.322 Sum_probs=71.3
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCcEEEEecCCCCcCcceeeeecccHHHHHHHcCChHHHHhhccCceeeEEEEcCCCc
Q 044609 6 EDVVIIGAGIAGLATAVALRRLGIKALVLEKSDGLRATGAALTLSPNAWLALDALGVSHKLTSVYAPAKRVFVTNLGTGA 85 (232)
Q Consensus 6 ~dV~IvG~G~~G~~~A~~L~~~g~~v~viE~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 85 (232)
.+|+|||+|..|+-+|..|++.|.+|+++|+.+.+... +
T Consensus 175 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~------------------~----------------------- 213 (468)
T 2qae_A 175 KTMVVIGGGVIGLELGSVWARLGAEVTVVEFAPRCAPT------------------L----------------------- 213 (468)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTT------------------S-----------------------
T ss_pred ceEEEECCCHHHHHHHHHHHHhCCEEEEEecCCccccc------------------C-----------------------
Confidence 58999999999999999999999999999987643110 0
Q ss_pred eeEEeccCCCCCCCCceeeeehHHHHHHH-hhhCCCCeEEeCceEEEEEecCCCCCccEEEEeC--CC--cEEEccEEEe
Q 044609 86 TQELSYAGKSGRIGSGLRSVHRQSLLEAL-ADELPDDTIQFSSKIAAIDSQTLNGSSAAIINLG--DS--TIIKAKVLIG 160 (232)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l-~~~~~~~~i~~~~~v~~i~~~~~~g~~~~~v~~~--~g--~~~~a~~vV~ 160 (232)
.. -....+.+.| .+. +++++.+++|++++.++ .. +.+.+. +| +++.||.||.
T Consensus 214 -------------d~----~~~~~l~~~l~~~~--gv~i~~~~~v~~i~~~~---~~-~~v~~~~~~g~~~~i~~D~vv~ 270 (468)
T 2qae_A 214 -------------DE----DVTNALVGALAKNE--KMKFMTSTKVVGGTNNG---DS-VSLEVEGKNGKRETVTCEALLV 270 (468)
T ss_dssp -------------CH----HHHHHHHHHHHHHT--CCEEECSCEEEEEEECS---SS-EEEEEECC---EEEEEESEEEE
T ss_pred -------------CH----HHHHHHHHHHhhcC--CcEEEeCCEEEEEEEcC---Ce-EEEEEEcCCCceEEEECCEEEE
Confidence 00 0122334444 332 89999999999998763 23 555554 66 5799999999
Q ss_pred cCCCchhh
Q 044609 161 CDGVHSMV 168 (232)
Q Consensus 161 A~G~~S~~ 168 (232)
|+|..++.
T Consensus 271 a~G~~p~~ 278 (468)
T 2qae_A 271 SVGRRPFT 278 (468)
T ss_dssp CSCEEECC
T ss_pred CCCcccCC
Confidence 99987653
No 206
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=98.61 E-value=3.7e-07 Score=74.39 Aligned_cols=98 Identities=17% Similarity=0.259 Sum_probs=71.8
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCcEEEEecCCCCcCcceeeeecccHHHHHHHcCChHHHHhhccCceeeEEEEcCCCc
Q 044609 6 EDVVIIGAGIAGLATAVALRRLGIKALVLEKSDGLRATGAALTLSPNAWLALDALGVSHKLTSVYAPAKRVFVTNLGTGA 85 (232)
Q Consensus 6 ~dV~IvG~G~~G~~~A~~L~~~g~~v~viE~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 85 (232)
.+|+|||||..|+-+|..|++.|.+|+++|+.+.+-.. +
T Consensus 172 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~------------------~----------------------- 210 (464)
T 2a8x_A 172 KSIIIAGAGAIGMEFGYVLKNYGVDVTIVEFLPRALPN------------------E----------------------- 210 (464)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTT------------------S-----------------------
T ss_pred CeEEEECCcHHHHHHHHHHHHcCCeEEEEEcCCccccc------------------c-----------------------
Confidence 58999999999999999999999999999987643110 0
Q ss_pred eeEEeccCCCCCCCCceeeeehHHHHHHHhhhCCCCeEEeCceEEEEEecCCCCCccEEEEeC-CC--cEEEccEEEecC
Q 044609 86 TQELSYAGKSGRIGSGLRSVHRQSLLEALADELPDDTIQFSSKIAAIDSQTLNGSSAAIINLG-DS--TIIKAKVLIGCD 162 (232)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~i~~~~~v~~i~~~~~~g~~~~~v~~~-~g--~~~~a~~vV~A~ 162 (232)
.. -....+.+.|.+. +++++++++|+++..++ .. +.+.+. +| +++.+|.||.|+
T Consensus 211 -------------~~----~~~~~l~~~l~~~--gv~i~~~~~v~~i~~~~---~~-~~v~~~~~g~~~~~~~D~vv~a~ 267 (464)
T 2a8x_A 211 -------------DA----DVSKEIEKQFKKL--GVTILTATKVESIADGG---SQ-VTVTVTKDGVAQELKAEKVLQAI 267 (464)
T ss_dssp -------------CH----HHHHHHHHHHHHH--TCEEECSCEEEEEEECS---SC-EEEEEESSSCEEEEEESEEEECS
T ss_pred -------------CH----HHHHHHHHHHHHc--CCEEEeCcEEEEEEEcC---Ce-EEEEEEcCCceEEEEcCEEEECC
Confidence 00 0012234444443 89999999999998753 23 555554 56 579999999999
Q ss_pred CCchh
Q 044609 163 GVHSM 167 (232)
Q Consensus 163 G~~S~ 167 (232)
|...+
T Consensus 268 G~~p~ 272 (464)
T 2a8x_A 268 GFAPN 272 (464)
T ss_dssp CEEEC
T ss_pred CCCcc
Confidence 98764
No 207
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=98.61 E-value=3.9e-08 Score=80.15 Aligned_cols=37 Identities=30% Similarity=0.463 Sum_probs=33.4
Q ss_pred CCcccccEEEECCCHHHHHHHHHHHhCCCcEEEEecCC
Q 044609 1 MEMVEEDVVIIGAGIAGLATAVALRRLGIKALVLEKSD 38 (232)
Q Consensus 1 m~~~~~dV~IvG~G~~G~~~A~~L~~~g~~v~viE~~~ 38 (232)
|+ +++||+|||||++|+++|..|++.|++|+|||++.
T Consensus 1 M~-~~~dVvIIGgG~aGl~aA~~l~~~g~~V~liE~~~ 37 (463)
T 2r9z_A 1 MT-QHFDLIAIGGGSGGLAVAEKAAAFGKRVALIESKA 37 (463)
T ss_dssp -C-CCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred CC-ccCcEEEECCCHHHHHHHHHHHhCCCcEEEEcCCC
Confidence 54 46899999999999999999999999999999973
No 208
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=98.61 E-value=3.5e-08 Score=80.18 Aligned_cols=35 Identities=26% Similarity=0.404 Sum_probs=32.9
Q ss_pred ccccEEEECCCHHHHHHHHHHHhCCCcEEEEecCC
Q 044609 4 VEEDVVIIGAGIAGLATAVALRRLGIKALVLEKSD 38 (232)
Q Consensus 4 ~~~dV~IvG~G~~G~~~A~~L~~~g~~v~viE~~~ 38 (232)
+++||+|||||++|+++|..|++.|++|+|||++.
T Consensus 3 ~~~dvvIIGgG~aGl~aA~~l~~~g~~V~liE~~~ 37 (450)
T 1ges_A 3 KHYDYIAIGGGSGGIASINRAAMYGQKCALIEAKE 37 (450)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHTTTCCEEEEESSC
T ss_pred ccCCEEEECCCHHHHHHHHHHHhCCCeEEEEcCCC
Confidence 46899999999999999999999999999999973
No 209
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.59 E-value=4.4e-08 Score=80.60 Aligned_cols=34 Identities=35% Similarity=0.508 Sum_probs=32.4
Q ss_pred cccEEEECCCHHHHHHHHHHHhCCCcEEEEecCC
Q 044609 5 EEDVVIIGAGIAGLATAVALRRLGIKALVLEKSD 38 (232)
Q Consensus 5 ~~dV~IvG~G~~G~~~A~~L~~~g~~v~viE~~~ 38 (232)
++||+|||||++|+++|..|++.|++|+|||++.
T Consensus 2 ~~dVvIIGgG~aGl~aA~~l~~~g~~V~liE~~~ 35 (500)
T 1onf_A 2 VYDLIVIGGGSGGMAAARRAARHNAKVALVEKSR 35 (500)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHTTCCEEEEESSS
T ss_pred ccCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 5899999999999999999999999999999984
No 210
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=98.58 E-value=4.5e-08 Score=80.16 Aligned_cols=35 Identities=31% Similarity=0.489 Sum_probs=32.8
Q ss_pred ccccEEEECCCHHHHHHHHHHHhCCCcEEEEecCC
Q 044609 4 VEEDVVIIGAGIAGLATAVALRRLGIKALVLEKSD 38 (232)
Q Consensus 4 ~~~dV~IvG~G~~G~~~A~~L~~~g~~v~viE~~~ 38 (232)
.++||+|||||++|+++|..|++.|++|+|||++.
T Consensus 10 ~~~dVvVIGgG~aGl~aA~~l~~~g~~V~liE~~~ 44 (479)
T 2hqm_A 10 KHYDYLVIGGGSGGVASARRAASYGAKTLLVEAKA 44 (479)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTSCCEEEEESSC
T ss_pred ccCCEEEEcCCHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 35899999999999999999999999999999974
No 211
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=98.58 E-value=4.6e-07 Score=73.59 Aligned_cols=99 Identities=19% Similarity=0.248 Sum_probs=71.3
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCcEEEEecCCCCcCcceeeeecccHHHHHHHcCChHHHHhhccCceeeEEEEcCCCc
Q 044609 6 EDVVIIGAGIAGLATAVALRRLGIKALVLEKSDGLRATGAALTLSPNAWLALDALGVSHKLTSVYAPAKRVFVTNLGTGA 85 (232)
Q Consensus 6 ~dV~IvG~G~~G~~~A~~L~~~g~~v~viE~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 85 (232)
.+|+|||+|..|+-+|..|++.|.+|+++|+.+.+-... +
T Consensus 150 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~-----------------~----------------------- 189 (452)
T 2cdu_A 150 KTITIIGSGYIGAELAEAYSNQNYNVNLIDGHERVLYKY-----------------F----------------------- 189 (452)
T ss_dssp SEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSTTTTT-----------------S-----------------------
T ss_pred CeEEEECcCHHHHHHHHHHHhcCCEEEEEEcCCchhhhh-----------------h-----------------------
Confidence 589999999999999999999999999999876431100 0
Q ss_pred eeEEeccCCCCCCCCceeeeehHHHHHHHhhhCCCCeEEeCceEEEEEecCCCCCccEEEEeCCCcEEEccEEEecCCCc
Q 044609 86 TQELSYAGKSGRIGSGLRSVHRQSLLEALADELPDDTIQFSSKIAAIDSQTLNGSSAAIINLGDSTIIKAKVLIGCDGVH 165 (232)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~i~~~~~v~~i~~~~~~g~~~~~v~~~~g~~~~a~~vV~A~G~~ 165 (232)
.. -....+.+.|.+. +++++++++|+++..++ +.. ..+.+ +|+++.||.||.|+|..
T Consensus 190 -------------~~----~~~~~l~~~l~~~--Gv~i~~~~~v~~i~~~~--~~v-~~v~~-~g~~i~~D~vv~a~G~~ 246 (452)
T 2cdu_A 190 -------------DK----EFTDILAKDYEAH--GVNLVLGSKVAAFEEVD--DEI-ITKTL-DGKEIKSDIAILCIGFR 246 (452)
T ss_dssp -------------CH----HHHHHHHHHHHHT--TCEEEESSCEEEEEEET--TEE-EEEET-TSCEEEESEEEECCCEE
T ss_pred -------------hh----hHHHHHHHHHHHC--CCEEEcCCeeEEEEcCC--CeE-EEEEe-CCCEEECCEEEECcCCC
Confidence 00 0112333444443 89999999999998643 332 33444 78889999999999987
Q ss_pred hh
Q 044609 166 SM 167 (232)
Q Consensus 166 S~ 167 (232)
..
T Consensus 247 p~ 248 (452)
T 2cdu_A 247 PN 248 (452)
T ss_dssp EC
T ss_pred CC
Confidence 54
No 212
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.57 E-value=2.2e-07 Score=75.62 Aligned_cols=97 Identities=19% Similarity=0.317 Sum_probs=70.7
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCcEEEEecCCCCcCcceeeeecccHHHHHHHcCChHHHHhhccCceeeEEEEcCCCc
Q 044609 6 EDVVIIGAGIAGLATAVALRRLGIKALVLEKSDGLRATGAALTLSPNAWLALDALGVSHKLTSVYAPAKRVFVTNLGTGA 85 (232)
Q Consensus 6 ~dV~IvG~G~~G~~~A~~L~~~g~~v~viE~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 85 (232)
.+|+|||||++|+-+|..|++.|.+|+++|+.+.+... ...
T Consensus 172 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~------------------~~~--------------------- 212 (458)
T 1lvl_A 172 QHLVVVGGGYIGLELGIAYRKLGAQVSVVEARERILPT------------------YDS--------------------- 212 (458)
T ss_dssp SEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSSTT------------------SCH---------------------
T ss_pred CeEEEECcCHHHHHHHHHHHHCCCeEEEEEcCCccccc------------------cCH---------------------
Confidence 58999999999999999999999999999997643110 000
Q ss_pred eeEEeccCCCCCCCCceeeeehHHHHHHHhhhCCCCeEEeCceEEEEEecCCCCCccEEEEeCCC--cEEEccEEEecCC
Q 044609 86 TQELSYAGKSGRIGSGLRSVHRQSLLEALADELPDDTIQFSSKIAAIDSQTLNGSSAAIINLGDS--TIIKAKVLIGCDG 163 (232)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~i~~~~~v~~i~~~~~~g~~~~~v~~~~g--~~~~a~~vV~A~G 163 (232)
-....+.+.|.+. +++++.+++|+++.. + + +.+...+| +++.+|.||.|+|
T Consensus 213 -------------------~~~~~l~~~l~~~--gv~i~~~~~v~~i~~-~--~---v~v~~~~G~~~~i~~D~vv~a~G 265 (458)
T 1lvl_A 213 -------------------ELTAPVAESLKKL--GIALHLGHSVEGYEN-G--C---LLANDGKGGQLRLEADRVLVAVG 265 (458)
T ss_dssp -------------------HHHHHHHHHHHHH--TCEEETTCEEEEEET-T--E---EEEECSSSCCCEECCSCEEECCC
T ss_pred -------------------HHHHHHHHHHHHC--CCEEEECCEEEEEEe-C--C---EEEEECCCceEEEECCEEEECcC
Confidence 0012234444443 899999999999975 3 2 44554456 5899999999999
Q ss_pred Cchhh
Q 044609 164 VHSMV 168 (232)
Q Consensus 164 ~~S~~ 168 (232)
..++.
T Consensus 266 ~~p~~ 270 (458)
T 1lvl_A 266 RRPRT 270 (458)
T ss_dssp EEECC
T ss_pred CCcCC
Confidence 87653
No 213
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=98.57 E-value=7e-07 Score=71.58 Aligned_cols=95 Identities=21% Similarity=0.334 Sum_probs=70.7
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCcEEEEecCCCCcCcceeeeecccHHHHHHHcCChHHHHhhccCceeeEEEEcCCCc
Q 044609 6 EDVVIIGAGIAGLATAVALRRLGIKALVLEKSDGLRATGAALTLSPNAWLALDALGVSHKLTSVYAPAKRVFVTNLGTGA 85 (232)
Q Consensus 6 ~dV~IvG~G~~G~~~A~~L~~~g~~v~viE~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 85 (232)
.+|+|||+|..|+-+|..|++.|.+|+++|+.+.+....
T Consensus 146 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~----------------------------------------- 184 (408)
T 2gqw_A 146 SRLLIVGGGVIGLELAATARTAGVHVSLVETQPRLMSRA----------------------------------------- 184 (408)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTTT-----------------------------------------
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCEEEEEEeCCcccccc-----------------------------------------
Confidence 689999999999999999999999999999876431100
Q ss_pred eeEEeccCCCCCCCCceeeeehHHHHHHHhhhCCCCeEEeCceEEEEEecCCCCCccEEEEeCCCcEEEccEEEecCCCc
Q 044609 86 TQELSYAGKSGRIGSGLRSVHRQSLLEALADELPDDTIQFSSKIAAIDSQTLNGSSAAIINLGDSTIIKAKVLIGCDGVH 165 (232)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~i~~~~~v~~i~~~~~~g~~~~~v~~~~g~~~~a~~vV~A~G~~ 165 (232)
. +. -....+.+.|.+. +++++.+++|+++. + + .|.+.+|+++.||.||.|+|..
T Consensus 185 ---------~---~~----~~~~~l~~~l~~~--GV~i~~~~~v~~i~-~---~----~v~~~~g~~i~~D~vi~a~G~~ 238 (408)
T 2gqw_A 185 ---------A---PA----TLADFVARYHAAQ--GVDLRFERSVTGSV-D---G----VVLLDDGTRIAADMVVVGIGVL 238 (408)
T ss_dssp ---------S---CH----HHHHHHHHHHHHT--TCEEEESCCEEEEE-T---T----EEEETTSCEEECSEEEECSCEE
T ss_pred ---------c---CH----HHHHHHHHHHHHc--CcEEEeCCEEEEEE-C---C----EEEECCCCEEEcCEEEECcCCC
Confidence 0 00 0112334444433 89999999999997 3 3 2456788899999999999987
Q ss_pred hh
Q 044609 166 SM 167 (232)
Q Consensus 166 S~ 167 (232)
..
T Consensus 239 p~ 240 (408)
T 2gqw_A 239 AN 240 (408)
T ss_dssp EC
T ss_pred cc
Confidence 53
No 214
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.56 E-value=3.2e-07 Score=74.91 Aligned_cols=100 Identities=22% Similarity=0.397 Sum_probs=72.0
Q ss_pred cccEEEECCCHHHHHHHHHHHhCCCcEEEEecCCCCcCcceeeeecccHHHHHHHcCChHHHHhhccCceeeEEEEcCCC
Q 044609 5 EEDVVIIGAGIAGLATAVALRRLGIKALVLEKSDGLRATGAALTLSPNAWLALDALGVSHKLTSVYAPAKRVFVTNLGTG 84 (232)
Q Consensus 5 ~~dV~IvG~G~~G~~~A~~L~~~g~~v~viE~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~ 84 (232)
..+|+|||||+.|+-+|..|++.|.+|+++|+.+.+... .
T Consensus 177 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtli~~~~~~l~~------------------~---------------------- 216 (470)
T 1dxl_A 177 PKKLVVIGAGYIGLEMGSVWGRIGSEVTVVEFASEIVPT------------------M---------------------- 216 (470)
T ss_dssp CSEEEESCCSHHHHHHHHHHHHHTCEEEEECSSSSSSTT------------------S----------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCccccc------------------c----------------------
Confidence 358999999999999999999999999999987644110 0
Q ss_pred ceeEEeccCCCCCCCCceeeeehHHHHHHHhhhCCCCeEEeCceEEEEEecCCCCCccEEEEeC---CC--cEEEccEEE
Q 044609 85 ATQELSYAGKSGRIGSGLRSVHRQSLLEALADELPDDTIQFSSKIAAIDSQTLNGSSAAIINLG---DS--TIIKAKVLI 159 (232)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~i~~~~~v~~i~~~~~~g~~~~~v~~~---~g--~~~~a~~vV 159 (232)
.. -....+.+.|.+. +++++.+++|.++..++ .. +.+.+. +| +++.+|.||
T Consensus 217 --------------~~----~~~~~l~~~l~~~--gv~i~~~~~v~~i~~~~---~~-~~v~~~~~~~g~~~~~~~D~vv 272 (470)
T 1dxl_A 217 --------------DA----EIRKQFQRSLEKQ--GMKFKLKTKVVGVDTSG---DG-VKLTVEPSAGGEQTIIEADVVL 272 (470)
T ss_dssp --------------CH----HHHHHHHHHHHHS--SCCEECSEEEEEEECSS---SS-EEEEEEESSSCCCEEEEESEEE
T ss_pred --------------cH----HHHHHHHHHHHHc--CCEEEeCCEEEEEEEcC---Ce-EEEEEEecCCCcceEEECCEEE
Confidence 00 0022234444443 89999999999998653 23 455543 44 579999999
Q ss_pred ecCCCchhh
Q 044609 160 GCDGVHSMV 168 (232)
Q Consensus 160 ~A~G~~S~~ 168 (232)
.|+|..++.
T Consensus 273 ~a~G~~p~~ 281 (470)
T 1dxl_A 273 VSAGRTPFT 281 (470)
T ss_dssp CCCCEEECC
T ss_pred ECCCCCcCC
Confidence 999987653
No 215
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=98.55 E-value=8.9e-07 Score=72.68 Aligned_cols=99 Identities=17% Similarity=0.252 Sum_probs=71.3
Q ss_pred cccEEEECCCHHHHHHHHHHHhCCCcEEEEecCCCCcCcceeeeecccHHHHHHHcCChHHHHhhccCceeeEEEEcCCC
Q 044609 5 EEDVVIIGAGIAGLATAVALRRLGIKALVLEKSDGLRATGAALTLSPNAWLALDALGVSHKLTSVYAPAKRVFVTNLGTG 84 (232)
Q Consensus 5 ~~dV~IvG~G~~G~~~A~~L~~~g~~v~viE~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~ 84 (232)
..+|+|||+|..|+-+|..|++.|.+|+++|+.+.+-... +
T Consensus 194 ~~~vvVIGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~~~-----------------~---------------------- 234 (490)
T 2bc0_A 194 IKRVAVVGAGYIGVELAEAFQRKGKEVVLIDVVDTCLAGY-----------------Y---------------------- 234 (490)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTTTT-----------------S----------------------
T ss_pred CceEEEECCCHHHHHHHHHHHHCCCeEEEEEcccchhhhH-----------------H----------------------
Confidence 3689999999999999999999999999999876431100 0
Q ss_pred ceeEEeccCCCCCCCCceeeeehHHHHHHHhhhCCCCeEEeCceEEEEEecCCCCCccEEEEeCCCcEEEccEEEecCCC
Q 044609 85 ATQELSYAGKSGRIGSGLRSVHRQSLLEALADELPDDTIQFSSKIAAIDSQTLNGSSAAIINLGDSTIIKAKVLIGCDGV 164 (232)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~i~~~~~v~~i~~~~~~g~~~~~v~~~~g~~~~a~~vV~A~G~ 164 (232)
.. -....+.+.|.+. +++++.+++|+++..+ +.. ..+.+ +|+++.||.||.|+|.
T Consensus 235 --------------~~----~~~~~l~~~l~~~--GV~i~~~~~v~~i~~~---~~v-~~v~~-~g~~i~~D~Vi~a~G~ 289 (490)
T 2bc0_A 235 --------------DR----DLTDLMAKNMEEH--GIQLAFGETVKEVAGN---GKV-EKIIT-DKNEYDVDMVILAVGF 289 (490)
T ss_dssp --------------CH----HHHHHHHHHHHTT--TCEEEETCCEEEEECS---SSC-CEEEE-SSCEEECSEEEECCCE
T ss_pred --------------HH----HHHHHHHHHHHhC--CeEEEeCCEEEEEEcC---CcE-EEEEE-CCcEEECCEEEECCCC
Confidence 00 0112334444433 8999999999999863 332 33555 6778999999999998
Q ss_pred chh
Q 044609 165 HSM 167 (232)
Q Consensus 165 ~S~ 167 (232)
...
T Consensus 290 ~p~ 292 (490)
T 2bc0_A 290 RPN 292 (490)
T ss_dssp EEC
T ss_pred CcC
Confidence 754
No 216
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=98.55 E-value=7.6e-07 Score=72.34 Aligned_cols=98 Identities=16% Similarity=0.251 Sum_probs=72.2
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCcEEEEecCCCCcCcceeeeecccHHHHHHHcCChHHHHhhccCceeeEEEEcCCCc
Q 044609 6 EDVVIIGAGIAGLATAVALRRLGIKALVLEKSDGLRATGAALTLSPNAWLALDALGVSHKLTSVYAPAKRVFVTNLGTGA 85 (232)
Q Consensus 6 ~dV~IvG~G~~G~~~A~~L~~~g~~v~viE~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 85 (232)
.+++|||+|..|+-+|..|++.|.+|+++++.+.+....
T Consensus 148 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~----------------------------------------- 186 (452)
T 3oc4_A 148 QTVAVIGAGPIGMEAIDFLVKMKKTVHVFESLENLLPKY----------------------------------------- 186 (452)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTTT-----------------------------------------
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEEccCcccccc-----------------------------------------
Confidence 579999999999999999999999999999876431100
Q ss_pred eeEEeccCCCCCCCCceeeeehHHHHHHHhhhCCCCeEEeCceEEEEEecCCCCCccEEEEeCCCcEEEccEEEecCCCc
Q 044609 86 TQELSYAGKSGRIGSGLRSVHRQSLLEALADELPDDTIQFSSKIAAIDSQTLNGSSAAIINLGDSTIIKAKVLIGCDGVH 165 (232)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~i~~~~~v~~i~~~~~~g~~~~~v~~~~g~~~~a~~vV~A~G~~ 165 (232)
+ .. --...+.+.|.+. +++++.+++|++++..+ .. +.|.+.++ ++.||.||.|+|..
T Consensus 187 -----~-------d~----~~~~~l~~~l~~~--GV~i~~~~~v~~i~~~~---~~-v~v~~~~g-~i~aD~Vv~A~G~~ 243 (452)
T 3oc4_A 187 -----F-------DK----EMVAEVQKSLEKQ--AVIFHFEETVLGIEETA---NG-IVLETSEQ-EISCDSGIFALNLH 243 (452)
T ss_dssp -----C-------CH----HHHHHHHHHHHTT--TEEEEETCCEEEEEECS---SC-EEEEESSC-EEEESEEEECSCCB
T ss_pred -----C-------CH----HHHHHHHHHHHHc--CCEEEeCCEEEEEEccC---Ce-EEEEECCC-EEEeCEEEECcCCC
Confidence 0 00 0122333444432 89999999999998653 33 66777777 89999999999987
Q ss_pred hh
Q 044609 166 SM 167 (232)
Q Consensus 166 S~ 167 (232)
..
T Consensus 244 p~ 245 (452)
T 3oc4_A 244 PQ 245 (452)
T ss_dssp CC
T ss_pred CC
Confidence 54
No 217
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=98.55 E-value=3.8e-07 Score=74.68 Aligned_cols=98 Identities=21% Similarity=0.290 Sum_probs=70.3
Q ss_pred cccEEEECCCHHHHHHHHHHHhCCCcEEEEecCCCCcCcceeeeecccHHHHHHHcCChHHHHhhccCceeeEEEEcCCC
Q 044609 5 EEDVVIIGAGIAGLATAVALRRLGIKALVLEKSDGLRATGAALTLSPNAWLALDALGVSHKLTSVYAPAKRVFVTNLGTG 84 (232)
Q Consensus 5 ~~dV~IvG~G~~G~~~A~~L~~~g~~v~viE~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~ 84 (232)
..+|+|||+|++|+-+|..|++.|.+|+++|+.+.+... +
T Consensus 186 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~------------------~---------------------- 225 (480)
T 3cgb_A 186 VEDVTIIGGGAIGLEMAETFVELGKKVRMIERNDHIGTI------------------Y---------------------- 225 (480)
T ss_dssp CCEEEEECCHHHHHHHHHHHHHTTCEEEEECCGGGTTSS------------------S----------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCeEEEEEeCCchhhc------------------C----------------------
Confidence 468999999999999999999999999999987533110 0
Q ss_pred ceeEEeccCCCCCCCCceeeeehHHHHHHHhhhCCCCeEEeCceEEEEEecCCCCCccEEEEeCCCcEEEccEEEecCCC
Q 044609 85 ATQELSYAGKSGRIGSGLRSVHRQSLLEALADELPDDTIQFSSKIAAIDSQTLNGSSAAIINLGDSTIIKAKVLIGCDGV 164 (232)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~i~~~~~v~~i~~~~~~g~~~~~v~~~~g~~~~a~~vV~A~G~ 164 (232)
.. -....+.+.+.+. +++++++++|+++..+ +.. ..+.+. +.++.||.||.|+|.
T Consensus 226 --------------~~----~~~~~l~~~l~~~--Gv~i~~~~~v~~i~~~---~~v-~~v~~~-~~~i~~D~vi~a~G~ 280 (480)
T 3cgb_A 226 --------------DG----DMAEYIYKEADKH--HIEILTNENVKAFKGN---ERV-EAVETD-KGTYKADLVLVSVGV 280 (480)
T ss_dssp --------------CH----HHHHHHHHHHHHT--TCEEECSCCEEEEEES---SBE-EEEEET-TEEEECSEEEECSCE
T ss_pred --------------CH----HHHHHHHHHHHHc--CcEEEcCCEEEEEEcC---CcE-EEEEEC-CCEEEcCEEEECcCC
Confidence 00 0012233444432 8999999999999764 332 445554 447999999999998
Q ss_pred chh
Q 044609 165 HSM 167 (232)
Q Consensus 165 ~S~ 167 (232)
.+.
T Consensus 281 ~p~ 283 (480)
T 3cgb_A 281 KPN 283 (480)
T ss_dssp EES
T ss_pred CcC
Confidence 764
No 218
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=98.54 E-value=6.8e-07 Score=72.92 Aligned_cols=97 Identities=18% Similarity=0.240 Sum_probs=72.0
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCcEEEEecCCCCcCcceeeeecccHHHHHHHcCChHHHHhhccCceeeEEEEcCCCc
Q 044609 6 EDVVIIGAGIAGLATAVALRRLGIKALVLEKSDGLRATGAALTLSPNAWLALDALGVSHKLTSVYAPAKRVFVTNLGTGA 85 (232)
Q Consensus 6 ~dV~IvG~G~~G~~~A~~L~~~g~~v~viE~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 85 (232)
.+|+|||+|+.|+-+|..|++.|.+|+++|+.+.+-..
T Consensus 177 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~------------------------------------------ 214 (467)
T 1zk7_A 177 ERLAVIGSSVVALELAQAFARLGSKVTVLARNTLFFRE------------------------------------------ 214 (467)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCTTTTS------------------------------------------
T ss_pred CEEEEECCCHHHHHHHHHHHHcCCEEEEEEECCccCCC------------------------------------------
Confidence 58999999999999999999999999999987643110
Q ss_pred eeEEeccCCCCCCCCceeeeehHHHHHHHhhhCCCCeEEeCceEEEEEecCCCCCccEEEEeCCCcEEEccEEEecCCCc
Q 044609 86 TQELSYAGKSGRIGSGLRSVHRQSLLEALADELPDDTIQFSSKIAAIDSQTLNGSSAAIINLGDSTIIKAKVLIGCDGVH 165 (232)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~i~~~~~v~~i~~~~~~g~~~~~v~~~~g~~~~a~~vV~A~G~~ 165 (232)
.+ -....+.+.|.+. +++++.+++|+++..++ .. +.|.+. +.++.||.||.|+|.+
T Consensus 215 -------------~~----~~~~~l~~~l~~~--Gv~i~~~~~v~~i~~~~---~~-~~v~~~-~~~i~aD~Vv~a~G~~ 270 (467)
T 1zk7_A 215 -------------DP----AIGEAVTAAFRAE--GIEVLEHTQASQVAHMD---GE-FVLTTT-HGELRADKLLVATGRT 270 (467)
T ss_dssp -------------CH----HHHHHHHHHHHHT--TCEEETTCCEEEEEEET---TE-EEEEET-TEEEEESEEEECSCEE
T ss_pred -------------CH----HHHHHHHHHHHhC--CCEEEcCCEEEEEEEeC---CE-EEEEEC-CcEEEcCEEEECCCCC
Confidence 00 0012334444433 89999999999998753 33 566666 4579999999999998
Q ss_pred hhh
Q 044609 166 SMV 168 (232)
Q Consensus 166 S~~ 168 (232)
+..
T Consensus 271 p~~ 273 (467)
T 1zk7_A 271 PNT 273 (467)
T ss_dssp ESC
T ss_pred cCC
Confidence 763
No 219
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=98.53 E-value=1e-06 Score=73.00 Aligned_cols=99 Identities=13% Similarity=0.127 Sum_probs=75.4
Q ss_pred cccEEEECCCHHHHHHHHHHHhCCCcEEEEecCCCCcCcceeeeecccHHHHHHHcCChHHHHhhccCceeeEEEEcCCC
Q 044609 5 EEDVVIIGAGIAGLATAVALRRLGIKALVLEKSDGLRATGAALTLSPNAWLALDALGVSHKLTSVYAPAKRVFVTNLGTG 84 (232)
Q Consensus 5 ~~dV~IvG~G~~G~~~A~~L~~~g~~v~viE~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~ 84 (232)
..+++|||||..|+-+|..+++.|.+|+|+++...+.. ..+
T Consensus 223 P~~lvIIGgG~IGlE~A~~~~~lG~~VTii~~~~~L~~-------------------~D~-------------------- 263 (542)
T 4b1b_A 223 PGKTLVVGASYVALECSGFLNSLGYDVTVAVRSIVLRG-------------------FDQ-------------------- 263 (542)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHHTCCEEEEESSCSSTT-------------------SCH--------------------
T ss_pred CceEEEECCCHHHHHHHHHHHhcCCeEEEecccccccc-------------------cch--------------------
Confidence 36899999999999999999999999999987532210 000
Q ss_pred ceeEEeccCCCCCCCCceeeeehHHHHHHHhhhCCCCeEEeCceEEEEEecCCCCCccEEEEeCCCcEEEccEEEecCCC
Q 044609 85 ATQELSYAGKSGRIGSGLRSVHRQSLLEALADELPDDTIQFSSKIAAIDSQTLNGSSAAIINLGDSTIIKAKVLIGCDGV 164 (232)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~i~~~~~v~~i~~~~~~g~~~~~v~~~~g~~~~a~~vV~A~G~ 164 (232)
--...+.+.|.+. +++++.+..+.+++..+ .. +.|.+.++.++.+|.|+.|.|+
T Consensus 264 --------------------ei~~~l~~~l~~~--gi~~~~~~~v~~~~~~~---~~-~~v~~~~~~~~~~D~vLvAvGR 317 (542)
T 4b1b_A 264 --------------------QCAVKVKLYMEEQ--GVMFKNGILPKKLTKMD---DK-ILVEFSDKTSELYDTVLYAIGR 317 (542)
T ss_dssp --------------------HHHHHHHHHHHHT--TCEEEETCCEEEEEEET---TE-EEEEETTSCEEEESEEEECSCE
T ss_pred --------------------hHHHHHHHHHHhh--cceeecceEEEEEEecC---Ce-EEEEEcCCCeEEEEEEEEcccc
Confidence 0122334445443 89999999999998764 44 7788889988999999999999
Q ss_pred chhh
Q 044609 165 HSMV 168 (232)
Q Consensus 165 ~S~~ 168 (232)
..++
T Consensus 318 ~Pnt 321 (542)
T 4b1b_A 318 KGDI 321 (542)
T ss_dssp EESC
T ss_pred cCCc
Confidence 7654
No 220
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=98.52 E-value=1.2e-06 Score=71.86 Aligned_cols=97 Identities=14% Similarity=0.230 Sum_probs=71.0
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCcEEEEecCCCCcCcceeeeecccHHHHHHHcCChHHHHhhccCceeeEEEEcCCCc
Q 044609 6 EDVVIIGAGIAGLATAVALRRLGIKALVLEKSDGLRATGAALTLSPNAWLALDALGVSHKLTSVYAPAKRVFVTNLGTGA 85 (232)
Q Consensus 6 ~dV~IvG~G~~G~~~A~~L~~~g~~v~viE~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 85 (232)
.+|+|||+|+.|+-+|..|++.|.+|+++|+.+.+... ...
T Consensus 175 k~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~~------------------~d~--------------------- 215 (492)
T 3ic9_A 175 KSVAVFGPGVIGLELGQALSRLGVIVKVFGRSGSVANL------------------QDE--------------------- 215 (492)
T ss_dssp SEEEEESSCHHHHHHHHHHHHTTCEEEEECCTTCCTTC------------------CCH---------------------
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCeEEEEEECCccccc------------------CCH---------------------
Confidence 58999999999999999999999999999987654110 000
Q ss_pred eeEEeccCCCCCCCCceeeeehHHHHHHHhhhCCCCeEEeCceEEEEEecCCCCCccEEEEeC--CC--cEEEccEEEec
Q 044609 86 TQELSYAGKSGRIGSGLRSVHRQSLLEALADELPDDTIQFSSKIAAIDSQTLNGSSAAIINLG--DS--TIIKAKVLIGC 161 (232)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~i~~~~~v~~i~~~~~~g~~~~~v~~~--~g--~~~~a~~vV~A 161 (232)
-....+.+.|.+ +++++.+++|++++.++ +. +.+.+. +| .++.+|.||.|
T Consensus 216 -------------------~~~~~l~~~l~~---~V~i~~~~~v~~i~~~~--~~--v~v~~~~~~G~~~~i~~D~Vi~a 269 (492)
T 3ic9_A 216 -------------------EMKRYAEKTFNE---EFYFDAKARVISTIEKE--DA--VEVIYFDKSGQKTTESFQYVLAA 269 (492)
T ss_dssp -------------------HHHHHHHHHHHT---TSEEETTCEEEEEEECS--SS--EEEEEECTTCCEEEEEESEEEEC
T ss_pred -------------------HHHHHHHHHHhh---CcEEEECCEEEEEEEcC--CE--EEEEEEeCCCceEEEECCEEEEe
Confidence 011223334433 38899999999998764 23 556653 67 58999999999
Q ss_pred CCCchh
Q 044609 162 DGVHSM 167 (232)
Q Consensus 162 ~G~~S~ 167 (232)
+|....
T Consensus 270 ~G~~p~ 275 (492)
T 3ic9_A 270 TGRKAN 275 (492)
T ss_dssp SCCEES
T ss_pred eCCccC
Confidence 998764
No 221
>3pl8_A Pyranose 2-oxidase; substrate complex, H167A mutant, homotetramer, GMC oxidoredu PHBH fold, rossmann domain, oxidoreductase; HET: FAD MES G3F; 1.35A {Trametes ochracea} PDB: 2igo_A* 3lsm_A* 2ign_A* 3k4c_A* 1tt0_A* 2igk_A* 3k4b_A* 3lsk_A* 3bg6_A* 3lsh_A* 3lsi_A* 2igm_A* 3k4j_A* 3k4m_A* 3bg7_A* 3k4k_A* 3k4l_A* 3bly_A* 1tzl_A* 3fdy_A* ...
Probab=98.52 E-value=8.8e-08 Score=80.72 Aligned_cols=38 Identities=29% Similarity=0.367 Sum_probs=34.5
Q ss_pred ccccEEEECCCHHHHHHHHHHHhCCCcEEEEecCCCCc
Q 044609 4 VEEDVVIIGAGIAGLATAVALRRLGIKALVLEKSDGLR 41 (232)
Q Consensus 4 ~~~dV~IvG~G~~G~~~A~~L~~~g~~v~viE~~~~~~ 41 (232)
.++||+|||||++|+++|+.|++.|++|+|||+.+...
T Consensus 45 ~~~dvvIIG~G~aGl~aA~~l~~~G~~V~liE~~~~~g 82 (623)
T 3pl8_A 45 IKYDVVIVGSGPIGCTYARELVGAGYKVAMFDIGEIDS 82 (623)
T ss_dssp -CEEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCCS
T ss_pred ccCCEEEECCcHHHHHHHHHHHhCCCcEEEEeccCCCC
Confidence 35899999999999999999999999999999987654
No 222
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=98.52 E-value=1.5e-06 Score=70.99 Aligned_cols=100 Identities=20% Similarity=0.289 Sum_probs=72.3
Q ss_pred cccEEEECCCHHHHHHHHHHHhCCCcEEEEecCCCCcCcceeeeecccHHHHHHHcCChHHHHhhccCceeeEEEEcCCC
Q 044609 5 EEDVVIIGAGIAGLATAVALRRLGIKALVLEKSDGLRATGAALTLSPNAWLALDALGVSHKLTSVYAPAKRVFVTNLGTG 84 (232)
Q Consensus 5 ~~dV~IvG~G~~G~~~A~~L~~~g~~v~viE~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~ 84 (232)
..+|+|||+|+.|+-+|..|++.|.+|+++++.+.+... .
T Consensus 180 ~~~v~ViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~------------------~---------------------- 219 (476)
T 3lad_A 180 PGKLGVIGAGVIGLELGSVWARLGAEVTVLEAMDKFLPA------------------V---------------------- 219 (476)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTT------------------S----------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCcEEEEecCCCcCcc------------------c----------------------
Confidence 358999999999999999999999999999986643110 0
Q ss_pred ceeEEeccCCCCCCCCceeeeehHHHHHHHhhhCCCCeEEeCceEEEEEecCCCCCccEEEEeCCC---cEEEccEEEec
Q 044609 85 ATQELSYAGKSGRIGSGLRSVHRQSLLEALADELPDDTIQFSSKIAAIDSQTLNGSSAAIINLGDS---TIIKAKVLIGC 161 (232)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~i~~~~~v~~i~~~~~~g~~~~~v~~~~g---~~~~a~~vV~A 161 (232)
. .-....+.+.|.+. +++++.+++|++++.++ .. +.+.+.++ +++.+|.||.|
T Consensus 220 --------------~----~~~~~~l~~~l~~~--Gv~v~~~~~v~~i~~~~---~~-~~v~~~~~~g~~~~~~D~vi~a 275 (476)
T 3lad_A 220 --------------D----EQVAKEAQKILTKQ--GLKILLGARVTGTEVKN---KQ-VTVKFVDAEGEKSQAFDKLIVA 275 (476)
T ss_dssp --------------C----HHHHHHHHHHHHHT--TEEEEETCEEEEEEECS---SC-EEEEEESSSEEEEEEESEEEEC
T ss_pred --------------C----HHHHHHHHHHHHhC--CCEEEECCEEEEEEEcC---CE-EEEEEEeCCCcEEEECCEEEEe
Confidence 0 00122334444433 89999999999998764 33 55665544 57999999999
Q ss_pred CCCchhh
Q 044609 162 DGVHSMV 168 (232)
Q Consensus 162 ~G~~S~~ 168 (232)
+|.....
T Consensus 276 ~G~~p~~ 282 (476)
T 3lad_A 276 VGRRPVT 282 (476)
T ss_dssp SCEEECC
T ss_pred eCCcccC
Confidence 9987643
No 223
>3g5s_A Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TRMFO; tRNA methyltransferase FAD folate, FAD, flavoprotein; HET: MSE FAD GSH; 1.05A {Thermus thermophilus} PDB: 3g5q_A* 3g5r_A*
Probab=98.52 E-value=1.2e-07 Score=74.58 Aligned_cols=34 Identities=38% Similarity=0.574 Sum_probs=32.1
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCcEEEEecCCC
Q 044609 6 EDVVIIGAGIAGLATAVALRRLGIKALVLEKSDG 39 (232)
Q Consensus 6 ~dV~IvG~G~~G~~~A~~L~~~g~~v~viE~~~~ 39 (232)
+||+|||||++|+.+|+.|+++|++|+|+|+++.
T Consensus 2 ~dViVIGgG~AG~~AA~~la~~G~~V~liE~~~~ 35 (443)
T 3g5s_A 2 ERVNVVGAGLAGSEAAWTLLRLGVPVRLFEMRPK 35 (443)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEECCTTT
T ss_pred CCEEEECchHHHHHHHHHHHHCCCcEEEEeccCC
Confidence 4999999999999999999999999999999874
No 224
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=98.52 E-value=9.1e-07 Score=68.29 Aligned_cols=97 Identities=15% Similarity=0.289 Sum_probs=69.6
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCcEEEEecCCCCcCcceeeeecccHHHHHHHcCChHHHHhhccCceeeEEEEcCCCc
Q 044609 6 EDVVIIGAGIAGLATAVALRRLGIKALVLEKSDGLRATGAALTLSPNAWLALDALGVSHKLTSVYAPAKRVFVTNLGTGA 85 (232)
Q Consensus 6 ~dV~IvG~G~~G~~~A~~L~~~g~~v~viE~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 85 (232)
.+|+|||+|++|+-+|..|++.|.+|+++++.+.+... .
T Consensus 146 ~~v~ViG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~--------------------~--------------------- 184 (320)
T 1trb_A 146 QKVAVIGGGNTAVEEALYLSNIASEVHLIHRRDGFRAE--------------------K--------------------- 184 (320)
T ss_dssp SEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSSCCCC--------------------H---------------------
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCeEEEEEeCCccccC--------------------H---------------------
Confidence 58999999999999999999999999999986533100 0
Q ss_pred eeEEeccCCCCCCCCceeeeehHHHHHHHhhhCCCCeEEeCceEEEEEecCCCCCccEEEEeCC----C--cEEEccEEE
Q 044609 86 TQELSYAGKSGRIGSGLRSVHRQSLLEALADELPDDTIQFSSKIAAIDSQTLNGSSAAIINLGD----S--TIIKAKVLI 159 (232)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~i~~~~~v~~i~~~~~~g~~~~~v~~~~----g--~~~~a~~vV 159 (232)
.....+.+.+.+ .+++++++++|+++..++ +.. ..|.+.+ | .++.||.||
T Consensus 185 -------------------~~~~~l~~~l~~--~gv~i~~~~~v~~i~~~~--~~v-~~v~~~~~~~~g~~~~i~~D~vv 240 (320)
T 1trb_A 185 -------------------ILIKRLMDKVEN--GNIILHTNRTLEEVTGDQ--MGV-TGVRLRDTQNSDNIESLDVAGLF 240 (320)
T ss_dssp -------------------HHHHHHHHHHHT--SSEEEECSCEEEEEEECS--SSE-EEEEEECCTTCCCCEEEECSEEE
T ss_pred -------------------HHHHHHHHhccc--CCeEEEcCceeEEEEcCC--Cce-EEEEEEeccCCCceEEEEcCEEE
Confidence 001223333433 289999999999998764 232 3355443 4 479999999
Q ss_pred ecCCCchh
Q 044609 160 GCDGVHSM 167 (232)
Q Consensus 160 ~A~G~~S~ 167 (232)
.|+|....
T Consensus 241 ~a~G~~p~ 248 (320)
T 1trb_A 241 VAIGHSPN 248 (320)
T ss_dssp ECSCEEES
T ss_pred EEeCCCCC
Confidence 99998754
No 225
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=98.51 E-value=9e-08 Score=77.74 Aligned_cols=36 Identities=42% Similarity=0.541 Sum_probs=33.7
Q ss_pred cccEEEECCCHHHHHHHHHHHhCCCcEEEEecCCCC
Q 044609 5 EEDVVIIGAGIAGLATAVALRRLGIKALVLEKSDGL 40 (232)
Q Consensus 5 ~~dV~IvG~G~~G~~~A~~L~~~g~~v~viE~~~~~ 40 (232)
.+||+||||||+|+++|..|++.|++|+|||+.+.+
T Consensus 122 ~~~V~IIGgGpAGl~aA~~L~~~G~~V~v~e~~~~~ 157 (456)
T 2vdc_G 122 GLSVGVIGAGPAGLAAAEELRAKGYEVHVYDRYDRM 157 (456)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCeEEEEeccCCC
Confidence 479999999999999999999999999999998765
No 226
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=98.49 E-value=1e-06 Score=68.44 Aligned_cols=94 Identities=17% Similarity=0.208 Sum_probs=70.1
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCcEEEEecCCCCcCcceeeeecccHHHHHHHcCChHHHHhhccCceeeEEEEcCCCc
Q 044609 6 EDVVIIGAGIAGLATAVALRRLGIKALVLEKSDGLRATGAALTLSPNAWLALDALGVSHKLTSVYAPAKRVFVTNLGTGA 85 (232)
Q Consensus 6 ~dV~IvG~G~~G~~~A~~L~~~g~~v~viE~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 85 (232)
.+|+|||+|++|+-+|..|++.|.+|+++++.+....
T Consensus 174 ~~v~vvG~G~~g~e~a~~l~~~g~~v~~v~~~~~~~~------------------------------------------- 210 (338)
T 3itj_A 174 KPLAVIGGGDSACEEAQFLTKYGSKVFMLVRKDHLRA------------------------------------------- 210 (338)
T ss_dssp SEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSSCCS-------------------------------------------
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCccCC-------------------------------------------
Confidence 5799999999999999999999999999998764311
Q ss_pred eeEEeccCCCCCCCCceeeeehHHHHHHHhhhCCCCeEEeCceEEEEEecCCCCCccEEEEeCC-----CcEEEccEEEe
Q 044609 86 TQELSYAGKSGRIGSGLRSVHRQSLLEALADELPDDTIQFSSKIAAIDSQTLNGSSAAIINLGD-----STIIKAKVLIG 160 (232)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~i~~~~~v~~i~~~~~~g~~~~~v~~~~-----g~~~~a~~vV~ 160 (232)
...+.+.+.+. .+++++.+++|.++..++ +.. ..|.+.+ +.++.||.||.
T Consensus 211 ---------------------~~~~~~~l~~~-~gv~i~~~~~v~~i~~~~--~~~-~~v~~~~~~~g~~~~i~~D~vi~ 265 (338)
T 3itj_A 211 ---------------------STIMQKRAEKN-EKIEILYNTVALEAKGDG--KLL-NALRIKNTKKNEETDLPVSGLFY 265 (338)
T ss_dssp ---------------------CHHHHHHHHHC-TTEEEECSEEEEEEEESS--SSE-EEEEEEETTTTEEEEEECSEEEE
T ss_pred ---------------------CHHHHHHHHhc-CCeEEeecceeEEEEccc--CcE-EEEEEEECCCCceEEEEeCEEEE
Confidence 11223344332 388999999999998764 332 4455544 35799999999
Q ss_pred cCCCchh
Q 044609 161 CDGVHSM 167 (232)
Q Consensus 161 A~G~~S~ 167 (232)
|+|....
T Consensus 266 a~G~~p~ 272 (338)
T 3itj_A 266 AIGHTPA 272 (338)
T ss_dssp CSCEEEC
T ss_pred EeCCCCC
Confidence 9998653
No 227
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=98.49 E-value=9.5e-07 Score=72.52 Aligned_cols=99 Identities=19% Similarity=0.320 Sum_probs=71.0
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCcEEEEecCCCCcCcceeeeecccHHHHHHHcCChHHHHhhccCceeeEEEEcCCCc
Q 044609 6 EDVVIIGAGIAGLATAVALRRLGIKALVLEKSDGLRATGAALTLSPNAWLALDALGVSHKLTSVYAPAKRVFVTNLGTGA 85 (232)
Q Consensus 6 ~dV~IvG~G~~G~~~A~~L~~~g~~v~viE~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 85 (232)
.+|+|||||..|+-+|..|++.|.+|+++|+.+..... .
T Consensus 199 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~------------------~----------------------- 237 (491)
T 3urh_A 199 ASMIVVGGGVIGLELGSVWARLGAKVTVVEFLDTILGG------------------M----------------------- 237 (491)
T ss_dssp SEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSSSS------------------S-----------------------
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCEEEEEecccccccc------------------C-----------------------
Confidence 58999999999999999999999999999987643110 0
Q ss_pred eeEEeccCCCCCCCCceeeeehHHHHHHHhhhCCCCeEEeCceEEEEEecCCCCCccEEEEeCC---C--cEEEccEEEe
Q 044609 86 TQELSYAGKSGRIGSGLRSVHRQSLLEALADELPDDTIQFSSKIAAIDSQTLNGSSAAIINLGD---S--TIIKAKVLIG 160 (232)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~i~~~~~v~~i~~~~~~g~~~~~v~~~~---g--~~~~a~~vV~ 160 (232)
.. -....+.+.|.+. +++++.+++|.+++.++ .. +.+.+.+ | +++.+|.||.
T Consensus 238 -------------d~----~~~~~l~~~l~~~--gV~v~~~~~v~~i~~~~---~~-~~v~~~~~~~g~~~~i~~D~Vi~ 294 (491)
T 3urh_A 238 -------------DG----EVAKQLQRMLTKQ--GIDFKLGAKVTGAVKSG---DG-AKVTFEPVKGGEATTLDAEVVLI 294 (491)
T ss_dssp -------------CH----HHHHHHHHHHHHT--TCEEECSEEEEEEEEET---TE-EEEEEEETTSCCCEEEEESEEEE
T ss_pred -------------CH----HHHHHHHHHHHhC--CCEEEECCeEEEEEEeC---CE-EEEEEEecCCCceEEEEcCEEEE
Confidence 00 0122334444433 89999999999998764 33 4454442 4 5799999999
Q ss_pred cCCCchhh
Q 044609 161 CDGVHSMV 168 (232)
Q Consensus 161 A~G~~S~~ 168 (232)
|+|.....
T Consensus 295 a~G~~p~~ 302 (491)
T 3urh_A 295 ATGRKPST 302 (491)
T ss_dssp CCCCEECC
T ss_pred eeCCccCC
Confidence 99987643
No 228
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.49 E-value=3.4e-07 Score=72.33 Aligned_cols=92 Identities=18% Similarity=0.251 Sum_probs=68.5
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCcEEEEecCCCCcCcceeeeecccHHHHHHHcCChHHHHhhccCceeeEEEEcCCCc
Q 044609 6 EDVVIIGAGIAGLATAVALRRLGIKALVLEKSDGLRATGAALTLSPNAWLALDALGVSHKLTSVYAPAKRVFVTNLGTGA 85 (232)
Q Consensus 6 ~dV~IvG~G~~G~~~A~~L~~~g~~v~viE~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 85 (232)
.+|+|||||++|+-+|..|++.|.+|+++|+.+.+.. +.+
T Consensus 144 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~------~~~---------------------------------- 183 (367)
T 1xhc_A 144 GEAIIIGGGFIGLELAGNLAEAGYHVKLIHRGAMFLG------LDE---------------------------------- 183 (367)
T ss_dssp SEEEEEECSHHHHHHHHHHHHTTCEEEEECSSSCCTT------CCH----------------------------------
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCEEEEEeCCCeecc------CCH----------------------------------
Confidence 5899999999999999999999999999998764311 000
Q ss_pred eeEEeccCCCCCCCCceeeeehHHHHHHHhhhCCCCeEEeCceEEEEEecCCCCCccEEEEeCCCcEEEccEEEecCCCc
Q 044609 86 TQELSYAGKSGRIGSGLRSVHRQSLLEALADELPDDTIQFSSKIAAIDSQTLNGSSAAIINLGDSTIIKAKVLIGCDGVH 165 (232)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~i~~~~~v~~i~~~~~~g~~~~~v~~~~g~~~~a~~vV~A~G~~ 165 (232)
-....+.+.|.+. +++++.+++|+++. . . .|.+.+|+ +.+|.||.|+|..
T Consensus 184 -------------------~~~~~l~~~l~~~--gV~i~~~~~v~~i~--~---~---~v~~~~g~-i~~D~vi~a~G~~ 233 (367)
T 1xhc_A 184 -------------------ELSNMIKDMLEET--GVKFFLNSELLEAN--E---E---GVLTNSGF-IEGKVKICAIGIV 233 (367)
T ss_dssp -------------------HHHHHHHHHHHHT--TEEEECSCCEEEEC--S---S---EEEETTEE-EECSCEEEECCEE
T ss_pred -------------------HHHHHHHHHHHHC--CCEEEcCCEEEEEE--e---e---EEEECCCE-EEcCEEEECcCCC
Confidence 0012233444443 89999999999986 2 1 24567887 9999999999987
Q ss_pred hh
Q 044609 166 SM 167 (232)
Q Consensus 166 S~ 167 (232)
++
T Consensus 234 p~ 235 (367)
T 1xhc_A 234 PN 235 (367)
T ss_dssp EC
T ss_pred cC
Confidence 64
No 229
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=98.48 E-value=9.3e-07 Score=74.20 Aligned_cols=96 Identities=20% Similarity=0.387 Sum_probs=71.5
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCcEEEEecCCCCcCcceeeeecccHHHHHHHcCChHHHHhhccCceeeEEEEcCCCc
Q 044609 6 EDVVIIGAGIAGLATAVALRRLGIKALVLEKSDGLRATGAALTLSPNAWLALDALGVSHKLTSVYAPAKRVFVTNLGTGA 85 (232)
Q Consensus 6 ~dV~IvG~G~~G~~~A~~L~~~g~~v~viE~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 85 (232)
.+|+|||+|..|+-+|..|++.|.+|+++++.+..... +
T Consensus 188 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~------------------~----------------------- 226 (588)
T 3ics_A 188 RHATVIGGGFIGVEMVENLRERGIEVTLVEMANQVMPP------------------I----------------------- 226 (588)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTT------------------S-----------------------
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCeEEEEecCCccccc------------------C-----------------------
Confidence 58999999999999999999999999999987643110 0
Q ss_pred eeEEeccCCCCCCCCceeeeehHHHHHHHhhhCCCCeEEeCceEEEEEecCCCCCccEEEEeCCCcEEEccEEEecCCCc
Q 044609 86 TQELSYAGKSGRIGSGLRSVHRQSLLEALADELPDDTIQFSSKIAAIDSQTLNGSSAAIINLGDSTIIKAKVLIGCDGVH 165 (232)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~i~~~~~v~~i~~~~~~g~~~~~v~~~~g~~~~a~~vV~A~G~~ 165 (232)
.. -....+.+.|.+. +++++.+++|+++..+. . .|.+.+|+++.||.||.|+|..
T Consensus 227 -------------~~----~~~~~l~~~l~~~--GV~i~~~~~v~~i~~~~---~---~v~~~~g~~i~~D~Vi~a~G~~ 281 (588)
T 3ics_A 227 -------------DY----EMAAYVHEHMKNH--DVELVFEDGVDALEENG---A---VVRLKSGSVIQTDMLILAIGVQ 281 (588)
T ss_dssp -------------CH----HHHHHHHHHHHHT--TCEEECSCCEEEEEGGG---T---EEEETTSCEEECSEEEECSCEE
T ss_pred -------------CH----HHHHHHHHHHHHc--CCEEEECCeEEEEecCC---C---EEEECCCCEEEcCEEEEccCCC
Confidence 00 0022334444433 89999999999997653 2 2566888899999999999987
Q ss_pred hh
Q 044609 166 SM 167 (232)
Q Consensus 166 S~ 167 (232)
+.
T Consensus 282 p~ 283 (588)
T 3ics_A 282 PE 283 (588)
T ss_dssp EC
T ss_pred CC
Confidence 54
No 230
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.48 E-value=9.9e-08 Score=77.67 Aligned_cols=35 Identities=29% Similarity=0.586 Sum_probs=32.5
Q ss_pred cccccEEEECCCHHHHHHHHHHHhCCCcEEEEecC
Q 044609 3 MVEEDVVIIGAGIAGLATAVALRRLGIKALVLEKS 37 (232)
Q Consensus 3 ~~~~dV~IvG~G~~G~~~A~~L~~~g~~v~viE~~ 37 (232)
+.++||+|||||++|+++|..|++.|++|+|||+.
T Consensus 3 ~~~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~ 37 (458)
T 1lvl_A 3 TIQTTLLIIGGGPGGYVAAIRAGQLGIPTVLVEGQ 37 (458)
T ss_dssp CEECSEEEECCSHHHHHHHHHHHHHTCCEEEECSS
T ss_pred CCcCCEEEECCCHHHHHHHHHHHHCCCEEEEEccC
Confidence 35689999999999999999999999999999993
No 231
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=98.48 E-value=1.4e-06 Score=70.41 Aligned_cols=94 Identities=20% Similarity=0.356 Sum_probs=70.6
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCcEEEEecCCCCcCcceeeeecccHHHHHHHcCChHHHHhhccCceeeEEEEcCCCc
Q 044609 6 EDVVIIGAGIAGLATAVALRRLGIKALVLEKSDGLRATGAALTLSPNAWLALDALGVSHKLTSVYAPAKRVFVTNLGTGA 85 (232)
Q Consensus 6 ~dV~IvG~G~~G~~~A~~L~~~g~~v~viE~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 85 (232)
.+|+|||||..|+-+|..|++.|.+|+++|+.+......
T Consensus 148 ~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~ll~~~----------------------------------------- 186 (437)
T 4eqs_A 148 DKVLVVGAGYVSLEVLENLYERGLHPTLIHRSDKINKLM----------------------------------------- 186 (437)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCEEEEEESSSCCSTTS-----------------------------------------
T ss_pred cEEEEECCccchhhhHHHHHhcCCcceeeeeeccccccc-----------------------------------------
Confidence 479999999999999999999999999999876431100
Q ss_pred eeEEeccCCCCCCCCceeeeehHHHHHHHhhhCCCCeEEeCceEEEEEecCCCCCccEEEEeCCCcEEEccEEEecCCCc
Q 044609 86 TQELSYAGKSGRIGSGLRSVHRQSLLEALADELPDDTIQFSSKIAAIDSQTLNGSSAAIINLGDSTIIKAKVLIGCDGVH 165 (232)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~i~~~~~v~~i~~~~~~g~~~~~v~~~~g~~~~a~~vV~A~G~~ 165 (232)
. .-....+.+.|.+. +++++.+++|+++... .+.+.+|+++.+|.|+.|.|..
T Consensus 187 -------------d----~~~~~~~~~~l~~~--gV~i~~~~~v~~~~~~--------~v~~~~g~~~~~D~vl~a~G~~ 239 (437)
T 4eqs_A 187 -------------D----ADMNQPILDELDKR--EIPYRLNEEINAINGN--------EITFKSGKVEHYDMIIEGVGTH 239 (437)
T ss_dssp -------------C----GGGGHHHHHHHHHT--TCCEEESCCEEEEETT--------EEEETTSCEEECSEEEECCCEE
T ss_pred -------------c----chhHHHHHHHhhcc--ceEEEeccEEEEecCC--------eeeecCCeEEeeeeEEEEecee
Confidence 0 00123445555543 8999999999887422 2567899999999999999976
Q ss_pred hh
Q 044609 166 SM 167 (232)
Q Consensus 166 S~ 167 (232)
.+
T Consensus 240 Pn 241 (437)
T 4eqs_A 240 PN 241 (437)
T ss_dssp ES
T ss_pred cC
Confidence 53
No 232
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=98.47 E-value=8.9e-07 Score=72.70 Aligned_cols=106 Identities=21% Similarity=0.302 Sum_probs=74.1
Q ss_pred ccEEEECCCHHHHHHHHHHHh----CCCcEEEEecCCCCcCcceeeeecccHHHHHHHcCChHHHHhhccCceeeEEEEc
Q 044609 6 EDVVIIGAGIAGLATAVALRR----LGIKALVLEKSDGLRATGAALTLSPNAWLALDALGVSHKLTSVYAPAKRVFVTNL 81 (232)
Q Consensus 6 ~dV~IvG~G~~G~~~A~~L~~----~g~~v~viE~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~ 81 (232)
.+|+|||||..|+-+|..|++ .|.+|+++++.+.+.... +
T Consensus 181 ~~vvViGgG~iG~E~A~~l~~~~~~~g~~V~~v~~~~~~~~~~-----------------l------------------- 224 (493)
T 1m6i_A 181 KSITIIGGGFLGSELACALGRKARALGTEVIQLFPEKGNMGKI-----------------L------------------- 224 (493)
T ss_dssp SEEEEECCSHHHHHHHHHHHHHHHHHTCEEEEECSSSSTTTTT-----------------S-------------------
T ss_pred CeEEEECCCHHHHHHHHHHHhhhhhcCCEEEEEecCccccccc-----------------C-------------------
Confidence 589999999999999999987 478899998764321000 0
Q ss_pred CCCceeEEeccCCCCCCCCceeeeehHHHHHHHhhhCCCCeEEeCceEEEEEecCCCCCccEEEEeCCCcEEEccEEEec
Q 044609 82 GTGATQELSYAGKSGRIGSGLRSVHRQSLLEALADELPDDTIQFSSKIAAIDSQTLNGSSAAIINLGDSTIIKAKVLIGC 161 (232)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~i~~~~~v~~i~~~~~~g~~~~~v~~~~g~~~~a~~vV~A 161 (232)
+. -....+.+.+.+. +++++.+++|+++..++ .. +.|.+.+|+++.||.||.|
T Consensus 225 -----------------~~----~~~~~~~~~l~~~--GV~v~~~~~V~~i~~~~---~~-~~v~l~dG~~i~aD~Vv~a 277 (493)
T 1m6i_A 225 -----------------PE----YLSNWTMEKVRRE--GVKVMPNAIVQSVGVSS---GK-LLIKLKDGRKVETDHIVAA 277 (493)
T ss_dssp -----------------CH----HHHHHHHHHHHTT--TCEEECSCCEEEEEEET---TE-EEEEETTSCEEEESEEEEC
T ss_pred -----------------CH----HHHHHHHHHHHhc--CCEEEeCCEEEEEEecC---Ce-EEEEECCCCEEECCEEEEC
Confidence 00 0012233344432 89999999999998653 33 6788899999999999999
Q ss_pred CCCchh--hhhhhcC
Q 044609 162 DGVHSM--VAQWLGL 174 (232)
Q Consensus 162 ~G~~S~--~r~~~~~ 174 (232)
.|..++ +.+.+++
T Consensus 278 ~G~~pn~~l~~~~gl 292 (493)
T 1m6i_A 278 VGLEPNVELAKTGGL 292 (493)
T ss_dssp CCEEECCTTHHHHTC
T ss_pred CCCCccHHHHHHcCC
Confidence 998754 3444443
No 233
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=98.45 E-value=1.2e-07 Score=77.91 Aligned_cols=33 Identities=30% Similarity=0.454 Sum_probs=31.1
Q ss_pred ccccEEEECCCHHHHHHHHHHHh-CCCcEEEEec
Q 044609 4 VEEDVVIIGAGIAGLATAVALRR-LGIKALVLEK 36 (232)
Q Consensus 4 ~~~dV~IvG~G~~G~~~A~~L~~-~g~~v~viE~ 36 (232)
+++||+|||||++|+++|..|++ .|++|+|||+
T Consensus 6 ~~~dvvVIGgG~aGl~aA~~la~~~G~~V~liE~ 39 (495)
T 2wpf_A 6 KAFDLVVIGAGSGGLEAGWNAATLYGKRVAVVDV 39 (495)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHHHCCCEEEEES
T ss_pred cccCEEEECCChhHHHHHHHHHHhcCCeEEEEec
Confidence 35899999999999999999999 9999999994
No 234
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=98.44 E-value=1.5e-07 Score=80.42 Aligned_cols=36 Identities=33% Similarity=0.529 Sum_probs=33.7
Q ss_pred cccEEEECCCHHHHHHHHHHHhCCCcEEEEecCCCC
Q 044609 5 EEDVVIIGAGIAGLATAVALRRLGIKALVLEKSDGL 40 (232)
Q Consensus 5 ~~dV~IvG~G~~G~~~A~~L~~~g~~v~viE~~~~~ 40 (232)
++||+|||||++|+++|+.|+++|++|+|||+.+..
T Consensus 391 ~~~VvIIGgG~AGl~aA~~La~~G~~V~liE~~~~~ 426 (690)
T 3k30_A 391 DARVLVVGAGPSGLEAARALGVRGYDVVLAEAGRDL 426 (690)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSS
T ss_pred cceEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCC
Confidence 479999999999999999999999999999998755
No 235
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=98.44 E-value=2.9e-06 Score=69.39 Aligned_cols=100 Identities=18% Similarity=0.172 Sum_probs=72.1
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCcEEEEecCCCCcCcceeeeecccHHHHHHHcCChHHHHhhccCceeeEEEEcCCCc
Q 044609 6 EDVVIIGAGIAGLATAVALRRLGIKALVLEKSDGLRATGAALTLSPNAWLALDALGVSHKLTSVYAPAKRVFVTNLGTGA 85 (232)
Q Consensus 6 ~dV~IvG~G~~G~~~A~~L~~~g~~v~viE~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 85 (232)
.+|+|||+|..|+-+|..|++.|.+|+++++.+.+-.. ...
T Consensus 188 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~------------------~d~--------------------- 228 (478)
T 3dk9_A 188 GRSVIVGAGYIAVEMAGILSALGSKTSLMIRHDKVLRS------------------FDS--------------------- 228 (478)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTT------------------SCH---------------------
T ss_pred ccEEEECCCHHHHHHHHHHHHcCCeEEEEEeCCccccc------------------cCH---------------------
Confidence 58999999999999999999999999999987643110 000
Q ss_pred eeEEeccCCCCCCCCceeeeehHHHHHHHhhhCCCCeEEeCceEEEEEecCCCCCccEEEEeCC---C----cEEEccEE
Q 044609 86 TQELSYAGKSGRIGSGLRSVHRQSLLEALADELPDDTIQFSSKIAAIDSQTLNGSSAAIINLGD---S----TIIKAKVL 158 (232)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~i~~~~~v~~i~~~~~~g~~~~~v~~~~---g----~~~~a~~v 158 (232)
-....+.+.|.+. +++++.+++|++++..++ +.. +.+.+.+ | .++.+|.|
T Consensus 229 -------------------~~~~~~~~~l~~~--gv~i~~~~~v~~i~~~~~-~~~-~~v~~~~~~~g~~~g~~~~~D~v 285 (478)
T 3dk9_A 229 -------------------MISTNCTEELENA--GVEVLKFSQVKEVKKTLS-GLE-VSMVTAVPGRLPVMTMIPDVDCL 285 (478)
T ss_dssp -------------------HHHHHHHHHHHHT--TCEEETTEEEEEEEECSS-SEE-EEEEECCTTSCCEEEEEEEESEE
T ss_pred -------------------HHHHHHHHHHHHC--CCEEEeCCEEEEEEEcCC-CcE-EEEEEccCCCCcccceEEEcCEE
Confidence 0022334444443 899999999999987642 323 5666665 2 57899999
Q ss_pred EecCCCchh
Q 044609 159 IGCDGVHSM 167 (232)
Q Consensus 159 V~A~G~~S~ 167 (232)
|.|.|....
T Consensus 286 i~a~G~~p~ 294 (478)
T 3dk9_A 286 LWAIGRVPN 294 (478)
T ss_dssp EECSCEEES
T ss_pred EEeeccccC
Confidence 999998654
No 236
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=98.44 E-value=3.2e-06 Score=65.00 Aligned_cols=94 Identities=14% Similarity=0.227 Sum_probs=68.3
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCcEEEEecCCCCcCcceeeeecccHHHHHHHcCChHHHHhhccCceeeEEEEcCCCc
Q 044609 6 EDVVIIGAGIAGLATAVALRRLGIKALVLEKSDGLRATGAALTLSPNAWLALDALGVSHKLTSVYAPAKRVFVTNLGTGA 85 (232)
Q Consensus 6 ~dV~IvG~G~~G~~~A~~L~~~g~~v~viE~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 85 (232)
.+|+|||+|+.|+-+|..|++.|.+|+++++.+.+...
T Consensus 144 ~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~------------------------------------------ 181 (311)
T 2q0l_A 144 KEVAVLGGGDTAVEEAIYLANICKKVYLIHRRDGFRCA------------------------------------------ 181 (311)
T ss_dssp SEEEEECCSHHHHHHHHHHHTTSSEEEEECSSSSCCSC------------------------------------------
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCEEEEEeeCCccCCC------------------------------------------
Confidence 58999999999999999999999999999986533100
Q ss_pred eeEEeccCCCCCCCCceeeeehHHHHHHHhhhCCCCeEEeCceEEEEEecCCCCCccEEEEeC---CCc--EEEccEEEe
Q 044609 86 TQELSYAGKSGRIGSGLRSVHRQSLLEALADELPDDTIQFSSKIAAIDSQTLNGSSAAIINLG---DST--IIKAKVLIG 160 (232)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~i~~~~~v~~i~~~~~~g~~~~~v~~~---~g~--~~~a~~vV~ 160 (232)
..+.+.+.+. .+++++++++++++..++ +.. ..|.+. +|+ ++.+|.||.
T Consensus 182 ----------------------~~~~~~l~~~-~gv~v~~~~~v~~i~~~~--~~v-~~v~~~~~~~g~~~~i~~D~vi~ 235 (311)
T 2q0l_A 182 ----------------------PITLEHAKNN-DKIEFLTPYVVEEIKGDA--SGV-SSLSIKNTATNEKRELVVPGFFI 235 (311)
T ss_dssp ----------------------HHHHHHHHTC-TTEEEETTEEEEEEEEET--TEE-EEEEEEETTTCCEEEEECSEEEE
T ss_pred ----------------------HHHHHHHhhC-CCeEEEeCCEEEEEECCC--CcE-eEEEEEecCCCceEEEecCEEEE
Confidence 0123333321 378999999999998653 221 234443 565 789999999
Q ss_pred cCCCchh
Q 044609 161 CDGVHSM 167 (232)
Q Consensus 161 A~G~~S~ 167 (232)
|+|....
T Consensus 236 a~G~~p~ 242 (311)
T 2q0l_A 236 FVGYDVN 242 (311)
T ss_dssp CSCEEEC
T ss_pred EecCccC
Confidence 9998654
No 237
>1kdg_A CDH, cellobiose dehydrogenase; GMC oxidoreductase, PHBH fold, alpha/beta structure, rossman 6-hydroxylated FAD, oxidoreductase; HET: NAG MAN 6FA EMT; 1.50A {Phanerochaete chrysosporium} SCOP: c.3.1.2 d.16.1.1 PDB: 1naa_A*
Probab=98.43 E-value=2.2e-07 Score=77.33 Aligned_cols=37 Identities=35% Similarity=0.504 Sum_probs=34.2
Q ss_pred ccccEEEECCCHHHHHHHHHHHhCCCcEEEEecCCCC
Q 044609 4 VEEDVVIIGAGIAGLATAVALRRLGIKALVLEKSDGL 40 (232)
Q Consensus 4 ~~~dV~IvG~G~~G~~~A~~L~~~g~~v~viE~~~~~ 40 (232)
.+||++|||+|++|+++|..|++.|++|+|||++...
T Consensus 6 ~~~D~iIvG~G~aG~~~A~~L~~~g~~VlvlE~g~~~ 42 (546)
T 1kdg_A 6 TPYDYIIVGAGPGGIIAADRLSEAGKKVLLLERGGPS 42 (546)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCCC
T ss_pred CceeEEEECcCHHHHHHHHHHHhCCCeEEEEeCCCCC
Confidence 4699999999999999999999999999999998643
No 238
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=98.42 E-value=1.2e-06 Score=71.38 Aligned_cols=135 Identities=11% Similarity=0.191 Sum_probs=75.7
Q ss_pred cccEEEECCCHHHHHHHHHHHhC--CCcEEEEecCCCCcCcce----eeeecccHHHHHHHcCChHH--HHhhccCceee
Q 044609 5 EEDVVIIGAGIAGLATAVALRRL--GIKALVLEKSDGLRATGA----ALTLSPNAWLALDALGVSHK--LTSVYAPAKRV 76 (232)
Q Consensus 5 ~~dV~IvG~G~~G~~~A~~L~~~--g~~v~viE~~~~~~~~~~----~~~~~~~~~~~l~~~g~~~~--~~~~~~~~~~~ 76 (232)
..+|+|||+|.+|+-+|..|++. +.+|++++|.+....... ...+.+.....+..+..... +......
T Consensus 227 ~~~vvVvGgG~sg~e~a~~l~~~~~~~~Vt~v~r~~~~~p~~~~~~~~~~~~p~~~~~~~~l~~~~~~~~~~~~~~---- 302 (463)
T 3s5w_A 227 PMKIAIIGGGQSAAEAFIDLNDSYPSVQADMILRASALKPADDSPFVNEVFAPKFTDLIYSREHAERERLLREYHN---- 302 (463)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHCTTEEEEEECSSSSCCBCCCCHHHHGGGSHHHHHHHHHSCHHHHHHHHHHTGG----
T ss_pred CCeEEEECCCHhHHHHHHHHHhcCCCCeEEEEEeCCCCcCccCCccchhccChhHHHHHhcCCHHHHHHHHHHhhc----
Confidence 46899999999999999999998 899999999876422110 00111222222222211000 0000000
Q ss_pred EEEEcCCCceeEEeccCCCCCCCCceeeeehHHHHHHHhh----hCCCCeEEeCceEEEEEecCCCCCccEEEEeC---C
Q 044609 77 FVTNLGTGATQELSYAGKSGRIGSGLRSVHRQSLLEALAD----ELPDDTIQFSSKIAAIDSQTLNGSSAAIINLG---D 149 (232)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~----~~~~~~i~~~~~v~~i~~~~~~g~~~~~v~~~---~ 149 (232)
..+. .... .+ ...+.+.+++ .-.+++++.+++|++++.++ .. +.|.+. +
T Consensus 303 ------------~~~~------~~~~-~~-~~~~~~~l~~~~~~~~~~v~i~~~~~v~~v~~~~---~~-~~v~~~~~~~ 358 (463)
T 3s5w_A 303 ------------TNYS------VVDT-DL-IERIYGVFYRQKVSGIPRHAFRCMTTVERATATA---QG-IELALRDAGS 358 (463)
T ss_dssp ------------GTSS------CBCH-HH-HHHHHHHHHHHHHHCCCCSEEETTEEEEEEEEET---TE-EEEEEEETTT
T ss_pred ------------cCCC------cCCH-HH-HHHHHHHHHHHHhcCCCCeEEEeCCEEEEEEecC---CE-EEEEEEEcCC
Confidence 0000 0000 00 0111111111 11478999999999998763 33 666665 5
Q ss_pred Cc--EEEccEEEecCCCchh
Q 044609 150 ST--IIKAKVLIGCDGVHSM 167 (232)
Q Consensus 150 g~--~~~a~~vV~A~G~~S~ 167 (232)
|+ ++.+|.||.|+|....
T Consensus 359 g~~~~~~~D~Vv~AtG~~p~ 378 (463)
T 3s5w_A 359 GELSVETYDAVILATGYERQ 378 (463)
T ss_dssp CCEEEEEESEEEECCCEECC
T ss_pred CCeEEEECCEEEEeeCCCCC
Confidence 65 5899999999998754
No 239
>3t37_A Probable dehydrogenase; BET alpha beta fold, ADP binding, oxidoreductase; HET: FAD; 2.19A {Mesorhizobium loti}
Probab=98.41 E-value=1.7e-07 Score=77.57 Aligned_cols=36 Identities=31% Similarity=0.461 Sum_probs=32.4
Q ss_pred ccccEEEECCCHHHHHHHHHHHh-CCCcEEEEecCCC
Q 044609 4 VEEDVVIIGAGIAGLATAVALRR-LGIKALVLEKSDG 39 (232)
Q Consensus 4 ~~~dV~IvG~G~~G~~~A~~L~~-~g~~v~viE~~~~ 39 (232)
.+||+||||+|.+|+.+|..|++ .+++|+|||++..
T Consensus 16 ~~yD~IIVGsG~aG~v~A~rLse~~~~~VLvLEaG~~ 52 (526)
T 3t37_A 16 PNCDIVIVGGGSAGSLLAARLSEDPDSRVLLIEAGEE 52 (526)
T ss_dssp -CEEEEEECCSHHHHHHHHHHTTSTTSCEEEECSSBC
T ss_pred CCeeEEEECccHHHHHHHHHHHhCCCCeEEEEcCCCC
Confidence 35999999999999999999998 6899999999864
No 240
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=98.39 E-value=4.1e-07 Score=74.30 Aligned_cols=56 Identities=13% Similarity=0.242 Sum_probs=44.4
Q ss_pred HHHHHHHhhhCC----------CCeEEeCceEEEEEecCCCCCccEEEEeCCCcEEEccEEEecCCCchh
Q 044609 108 QSLLEALADELP----------DDTIQFSSKIAAIDSQTLNGSSAAIINLGDSTIIKAKVLIGCDGVHSM 167 (232)
Q Consensus 108 ~~l~~~l~~~~~----------~~~i~~~~~v~~i~~~~~~g~~~~~v~~~~g~~~~a~~vV~A~G~~S~ 167 (232)
..+.+.|.+.+. +.+++++++|++|..++ .. +.|++.+|+++.||.||.|++....
T Consensus 206 ~~l~~~l~~~l~~~~~~~~~i~~~~i~~~~~V~~i~~~~---~~-v~v~~~~g~~~~ad~vI~a~~~~~l 271 (472)
T 1b37_A 206 EAVVYYLAGQYLKTDDKSGKIVDPRLQLNKVVREIKYSP---GG-VTVKTEDNSVYSADYVMVSASLGVL 271 (472)
T ss_dssp THHHHHHHHTTSCBCTTTCCBCCTTEESSCCEEEEEECS---SC-EEEEETTSCEEEESEEEECSCHHHH
T ss_pred HHHHHHHHHhccccccccccccccEEEcCCEEEEEEEcC---Cc-EEEEECCCCEEEcCEEEEecCHHHh
Confidence 366777776653 46899999999998864 34 7789999989999999999987543
No 241
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=98.39 E-value=2.9e-06 Score=69.19 Aligned_cols=98 Identities=24% Similarity=0.393 Sum_probs=71.5
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCcEEEEecCCCCcCcceeeeecccHHHHHHHcCChHHHHhhccCceeeEEEEcCCCc
Q 044609 6 EDVVIIGAGIAGLATAVALRRLGIKALVLEKSDGLRATGAALTLSPNAWLALDALGVSHKLTSVYAPAKRVFVTNLGTGA 85 (232)
Q Consensus 6 ~dV~IvG~G~~G~~~A~~L~~~g~~v~viE~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 85 (232)
.+|+|||+|+.|+-+|..|++.|.+|+++++.+.+-.. .
T Consensus 173 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~------------------~----------------------- 211 (466)
T 3l8k_A 173 QDMVIIGAGYIGLEIASIFRLMGVQTHIIEMLDRALIT------------------L----------------------- 211 (466)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTT------------------S-----------------------
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCEEEEEEeCCcCCCC------------------C-----------------------
Confidence 57999999999999999999999999999987643110 0
Q ss_pred eeEEeccCCCCCCCCceeeeehHHHHHHHhhhCCCCeEEeCceEEEEEecCCCCCccEEEEeC--CCc--EEEccEEEec
Q 044609 86 TQELSYAGKSGRIGSGLRSVHRQSLLEALADELPDDTIQFSSKIAAIDSQTLNGSSAAIINLG--DST--IIKAKVLIGC 161 (232)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~i~~~~~v~~i~~~~~~g~~~~~v~~~--~g~--~~~a~~vV~A 161 (232)
....+.+.+.+.+. ++++.+++|+++..++ ... +.+.+. +|+ ++.+|.||.|
T Consensus 212 --------------------~d~~~~~~l~~~l~-v~i~~~~~v~~i~~~~--~~~-v~v~~~~~~G~~~~i~~D~vi~a 267 (466)
T 3l8k_A 212 --------------------EDQDIVNTLLSILK-LNIKFNSPVTEVKKIK--DDE-YEVIYSTKDGSKKSIFTNSVVLA 267 (466)
T ss_dssp --------------------CCHHHHHHHHHHHC-CCEECSCCEEEEEEEE--TTE-EEEEECCTTSCCEEEEESCEEEC
T ss_pred --------------------CCHHHHHHHHhcCE-EEEEECCEEEEEEEcC--CCc-EEEEEEecCCceEEEEcCEEEEC
Confidence 00122233333332 8899999999998753 133 667776 675 8999999999
Q ss_pred CCCchhh
Q 044609 162 DGVHSMV 168 (232)
Q Consensus 162 ~G~~S~~ 168 (232)
+|.....
T Consensus 268 ~G~~p~~ 274 (466)
T 3l8k_A 268 AGRRPVI 274 (466)
T ss_dssp CCEEECC
T ss_pred cCCCccc
Confidence 9987643
No 242
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=98.38 E-value=4e-06 Score=68.66 Aligned_cols=98 Identities=15% Similarity=0.212 Sum_probs=69.9
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCcEEEEecCCCCcCcceeeeecccHHHHHHHcCChHHHHhhccCceeeEEEEcCCCc
Q 044609 6 EDVVIIGAGIAGLATAVALRRLGIKALVLEKSDGLRATGAALTLSPNAWLALDALGVSHKLTSVYAPAKRVFVTNLGTGA 85 (232)
Q Consensus 6 ~dV~IvG~G~~G~~~A~~L~~~g~~v~viE~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 85 (232)
.+++|||+|..|+-+|..|++.|.+|+++++...... +..
T Consensus 188 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~l~~-------------------~d~--------------------- 227 (483)
T 3dgh_A 188 GKTLVVGAGYIGLECAGFLKGLGYEPTVMVRSIVLRG-------------------FDQ--------------------- 227 (483)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESSCSSTT-------------------SCH---------------------
T ss_pred CcEEEECCCHHHHHHHHHHHHcCCEEEEEeCCCCCcc-------------------cCH---------------------
Confidence 5799999999999999999999999999997421100 000
Q ss_pred eeEEeccCCCCCCCCceeeeehHHHHHHHhhhCCCCeEEeCceEEEEEecCCCCCccEEEEeCCCc-----EEEccEEEe
Q 044609 86 TQELSYAGKSGRIGSGLRSVHRQSLLEALADELPDDTIQFSSKIAAIDSQTLNGSSAAIINLGDST-----IIKAKVLIG 160 (232)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~i~~~~~v~~i~~~~~~g~~~~~v~~~~g~-----~~~a~~vV~ 160 (232)
-....+.+.|.+. +++++.+++|.+++..+ +.. +.|.+.++. ++.+|.||.
T Consensus 228 -------------------~~~~~l~~~l~~~--Gv~i~~~~~v~~i~~~~--~~~-~~v~~~~~~~~~~~~~~~D~vi~ 283 (483)
T 3dgh_A 228 -------------------QMAELVAASMEER--GIPFLRKTVPLSVEKQD--DGK-LLVKYKNVETGEESEDVYDTVLW 283 (483)
T ss_dssp -------------------HHHHHHHHHHHHT--TCCEEETEEEEEEEECT--TSC-EEEEEEETTTCCEEEEEESEEEE
T ss_pred -------------------HHHHHHHHHHHhC--CCEEEeCCEEEEEEEcC--CCc-EEEEEecCCCCceeEEEcCEEEE
Confidence 0112334444443 89999999999998754 223 556665543 789999999
Q ss_pred cCCCchh
Q 044609 161 CDGVHSM 167 (232)
Q Consensus 161 A~G~~S~ 167 (232)
|+|....
T Consensus 284 a~G~~p~ 290 (483)
T 3dgh_A 284 AIGRKGL 290 (483)
T ss_dssp CSCEEEC
T ss_pred CcccccC
Confidence 9998654
No 243
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=98.37 E-value=3e-07 Score=77.34 Aligned_cols=34 Identities=32% Similarity=0.557 Sum_probs=31.9
Q ss_pred ccccEEEECCCHHHHHHHHHHHhCCCcEEEEecC
Q 044609 4 VEEDVVIIGAGIAGLATAVALRRLGIKALVLEKS 37 (232)
Q Consensus 4 ~~~dV~IvG~G~~G~~~A~~L~~~g~~v~viE~~ 37 (232)
.++||+||||||+|+++|..|++.|++|+|||+.
T Consensus 106 ~~~dvvVIG~GpAGl~aA~~l~~~g~~v~liE~~ 139 (598)
T 2x8g_A 106 YDYDLIVIGGGSGGLAAGKEAAKYGAKTAVLDYV 139 (598)
T ss_dssp SSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCC
T ss_pred ccccEEEECCCccHHHHHHHHHhCCCeEEEEecc
Confidence 4589999999999999999999999999999984
No 244
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=98.37 E-value=4.2e-07 Score=78.13 Aligned_cols=36 Identities=25% Similarity=0.464 Sum_probs=33.7
Q ss_pred cccEEEECCCHHHHHHHHHHHhCCCcEEEEecCCCC
Q 044609 5 EEDVVIIGAGIAGLATAVALRRLGIKALVLEKSDGL 40 (232)
Q Consensus 5 ~~dV~IvG~G~~G~~~A~~L~~~g~~v~viE~~~~~ 40 (232)
.+||+|||||++|+++|..|++.|++|+|||+.+.+
T Consensus 389 ~~~VvIIGgGpAGl~aA~~L~~~G~~Vtlie~~~~~ 424 (729)
T 1o94_A 389 KDSVLIVGAGPSGSEAARVLMESGYTVHLTDTAEKI 424 (729)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSST
T ss_pred CceEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCc
Confidence 479999999999999999999999999999998765
No 245
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=98.36 E-value=2.6e-07 Score=75.10 Aligned_cols=37 Identities=19% Similarity=0.206 Sum_probs=33.7
Q ss_pred ccccEEEECCCHHHHHHHHHHHh-C------CCcEEEEecCCCC
Q 044609 4 VEEDVVIIGAGIAGLATAVALRR-L------GIKALVLEKSDGL 40 (232)
Q Consensus 4 ~~~dV~IvG~G~~G~~~A~~L~~-~------g~~v~viE~~~~~ 40 (232)
..+||+|||||++|+++|..|++ . |++|+|||+.+.+
T Consensus 2 ~~~~VvIIG~G~aGl~aA~~L~~~~~~~~~~g~~V~lie~~~~~ 45 (456)
T 1lqt_A 2 RPYYIAIVGSGPSAFFAAASLLKAADTTEDLDMAVDMLEMLPTP 45 (456)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEEEEESSSSC
T ss_pred CCCEEEEECcCHHHHHHHHHHHhhCccccCCCCeEEEEecCCCC
Confidence 45799999999999999999999 7 9999999998654
No 246
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=98.36 E-value=5.2e-06 Score=64.05 Aligned_cols=93 Identities=12% Similarity=0.188 Sum_probs=68.1
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCcEEEEecCCCCcCcceeeeecccHHHHHHHcCChHHHHhhccCceeeEEEEcCCCc
Q 044609 6 EDVVIIGAGIAGLATAVALRRLGIKALVLEKSDGLRATGAALTLSPNAWLALDALGVSHKLTSVYAPAKRVFVTNLGTGA 85 (232)
Q Consensus 6 ~dV~IvG~G~~G~~~A~~L~~~g~~v~viE~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 85 (232)
.+|+|||+|++|+-+|..|++.|.+|+++++.+.....
T Consensus 156 ~~v~viG~G~~g~e~a~~l~~~g~~V~~i~~~~~~~~~------------------------------------------ 193 (319)
T 3cty_A 156 KRVVTIGGGNSGAIAAISMSEYVKNVTIIEYMPKYMCE------------------------------------------ 193 (319)
T ss_dssp SEEEEECCSHHHHHHHHHHTTTBSEEEEECSSSSCCSC------------------------------------------
T ss_pred CeEEEECCCHHHHHHHHHHHhhCCcEEEEEcCCccCCC------------------------------------------
Confidence 57999999999999999999999999999986532100
Q ss_pred eeEEeccCCCCCCCCceeeeehHHHHHHHhhhCCCCeEEeCceEEEEEecCCCCCccEEEEeC---CCc--EEEccEEEe
Q 044609 86 TQELSYAGKSGRIGSGLRSVHRQSLLEALADELPDDTIQFSSKIAAIDSQTLNGSSAAIINLG---DST--IIKAKVLIG 160 (232)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~i~~~~~v~~i~~~~~~g~~~~~v~~~---~g~--~~~a~~vV~ 160 (232)
..+.+.+.+ .+++++++++|+++..++ +.. ..+.+. +|+ ++.+|.||.
T Consensus 194 ----------------------~~l~~~l~~--~gv~i~~~~~v~~i~~~~--~~v-~~v~~~~~~~g~~~~i~~D~vi~ 246 (319)
T 3cty_A 194 ----------------------NAYVQEIKK--RNIPYIMNAQVTEIVGDG--KKV-TGVKYKDRTTGEEKLIETDGVFI 246 (319)
T ss_dssp ----------------------HHHHHHHHH--TTCCEECSEEEEEEEESS--SSE-EEEEEEETTTCCEEEECCSEEEE
T ss_pred ----------------------HHHHHHHhc--CCcEEEcCCeEEEEecCC--ceE-EEEEEEEcCCCceEEEecCEEEE
Confidence 112333333 388999999999998753 322 344443 564 689999999
Q ss_pred cCCCchh
Q 044609 161 CDGVHSM 167 (232)
Q Consensus 161 A~G~~S~ 167 (232)
|+|....
T Consensus 247 a~G~~p~ 253 (319)
T 3cty_A 247 YVGLIPQ 253 (319)
T ss_dssp CCCEEEC
T ss_pred eeCCccC
Confidence 9998754
No 247
>1ju2_A HydroxynitrIle lyase; flavin, GMC oxidoreductase, almond, cyanogenesis; HET: NAG NDG FUC BMA MAN FAD; 1.47A {Prunus dulcis} SCOP: c.3.1.2 d.16.1.1 PDB: 3gdp_A* 3gdn_A*
Probab=98.35 E-value=2.1e-07 Score=77.22 Aligned_cols=36 Identities=36% Similarity=0.439 Sum_probs=33.1
Q ss_pred ccccEEEECCCHHHHHHHHHHHhCCCcEEEEecCCCC
Q 044609 4 VEEDVVIIGAGIAGLATAVALRRLGIKALVLEKSDGL 40 (232)
Q Consensus 4 ~~~dV~IvG~G~~G~~~A~~L~~~g~~v~viE~~~~~ 40 (232)
.+||+||||+|.+|+++|..|++ |.+|+|||+++..
T Consensus 25 ~~yD~IIVGsG~AG~v~A~rLse-g~~VlvLEaG~~~ 60 (536)
T 1ju2_A 25 GSYDYVIVGGGTSGCPLAATLSE-KYKVLVLERGSLP 60 (536)
T ss_dssp EEEEEEEECCSTTHHHHHHHHTT-TSCEEEECSSBCG
T ss_pred CcccEEEECccHHHHHHHHHHhc-CCcEEEEecCCCc
Confidence 45899999999999999999999 9999999998653
No 248
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=98.35 E-value=2e-06 Score=67.76 Aligned_cols=105 Identities=16% Similarity=0.210 Sum_probs=69.1
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCcEEEEecCCCCcCcceeeeecccHHHHHHHcCChHHHHhhccCceeeEEEEcCCCc
Q 044609 6 EDVVIIGAGIAGLATAVALRRLGIKALVLEKSDGLRATGAALTLSPNAWLALDALGVSHKLTSVYAPAKRVFVTNLGTGA 85 (232)
Q Consensus 6 ~dV~IvG~G~~G~~~A~~L~~~g~~v~viE~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 85 (232)
.+|+|||+|.+|+-+|..|++.|.+|+++++.+...... + ..
T Consensus 167 ~~vvVvG~G~~g~e~a~~l~~~g~~V~lv~~~~~~~~~~---------------~---------------------d~-- 208 (369)
T 3d1c_A 167 GQYVVIGGNESGFDAAYQLAKNGSDIALYTSTTGLNDPD---------------A---------------------DP-- 208 (369)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECC----------------------------------------------C--
T ss_pred CEEEEECCCcCHHHHHHHHHhcCCeEEEEecCCCCCCCC---------------C---------------------CC--
Confidence 489999999999999999999999999999875431100 0 00
Q ss_pred eeEEeccCCCCCCCCceeeeehHHHHHHHhhhCCC-CeEEeCceEEEEEecCCCCCccEEEEeCCCcEEE-ccEEEecCC
Q 044609 86 TQELSYAGKSGRIGSGLRSVHRQSLLEALADELPD-DTIQFSSKIAAIDSQTLNGSSAAIINLGDSTIIK-AKVLIGCDG 163 (232)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~-~~i~~~~~v~~i~~~~~~g~~~~~v~~~~g~~~~-a~~vV~A~G 163 (232)
. ... + ...+..+.+.|.+ .+ ++++.+++|.++..++ .. +.+.+.+|+++. +|.||.|+|
T Consensus 209 ------~-~~~--~----~~~~~~l~~~l~~--~g~v~~~~~~~v~~i~~~~---~~-~~v~~~~g~~~~~~d~vi~a~G 269 (369)
T 3d1c_A 209 ------S-VRL--S----PYTRQRLGNVIKQ--GARIEMNVHYTVKDIDFNN---GQ-YHISFDSGQSVHTPHEPILATG 269 (369)
T ss_dssp ------T-TSC--C----HHHHHHHHHHHHT--TCCEEEECSCCEEEEEEET---TE-EEEEESSSCCEEESSCCEECCC
T ss_pred ------C-ccC--C----HHHHHHHHHHHhh--CCcEEEecCcEEEEEEecC---Cc-eEEEecCCeEeccCCceEEeec
Confidence 0 000 0 0012333444443 25 8999999999997643 33 677888887665 599999999
Q ss_pred Cchh
Q 044609 164 VHSM 167 (232)
Q Consensus 164 ~~S~ 167 (232)
....
T Consensus 270 ~~~~ 273 (369)
T 3d1c_A 270 FDAT 273 (369)
T ss_dssp BCGG
T ss_pred cCCc
Confidence 8754
No 249
>1gpe_A Protein (glucose oxidase); oxidoreductase(flavoprotein); HET: NAG BMA MAN FAD; 1.80A {Penicillium amagasakiense} SCOP: c.3.1.2 d.16.1.1
Probab=98.33 E-value=5.4e-07 Score=75.49 Aligned_cols=40 Identities=35% Similarity=0.402 Sum_probs=35.3
Q ss_pred CCcccccEEEECCCHHHHHHHHHHHh-CCCcEEEEecCCCC
Q 044609 1 MEMVEEDVVIIGAGIAGLATAVALRR-LGIKALVLEKSDGL 40 (232)
Q Consensus 1 m~~~~~dV~IvG~G~~G~~~A~~L~~-~g~~v~viE~~~~~ 40 (232)
|.+.+||++|||+|++|+++|..|++ .|.+|+|||++...
T Consensus 20 ~~~~~~d~iivG~G~~g~~~a~~l~~~~~~~v~~~e~g~~~ 60 (587)
T 1gpe_A 20 VAGKTYDYIIAGGGLTGLTVAAKLTENPKIKVLVIEKGFYE 60 (587)
T ss_dssp TTTCEEEEEEECCSHHHHHHHHHHHTSTTCCEEEEESSCCC
T ss_pred cCcccCCEEEECcCHHHHHHHHHHHhCCCCcEEEEecCCcc
Confidence 34456999999999999999999999 79999999998643
No 250
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=98.32 E-value=8.6e-06 Score=63.00 Aligned_cols=93 Identities=18% Similarity=0.247 Sum_probs=67.7
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCcEEEEecCCCCcCcceeeeecccHHHHHHHcCChHHHHhhccCceeeEEEEcCCCc
Q 044609 6 EDVVIIGAGIAGLATAVALRRLGIKALVLEKSDGLRATGAALTLSPNAWLALDALGVSHKLTSVYAPAKRVFVTNLGTGA 85 (232)
Q Consensus 6 ~dV~IvG~G~~G~~~A~~L~~~g~~v~viE~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 85 (232)
.+|+|||+|.+|+-+|..|++.|.+|+++++.+.+...
T Consensus 153 ~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~------------------------------------------ 190 (325)
T 2q7v_A 153 KKVVVIGGGDAAVEEGMFLTKFADEVTVIHRRDTLRAN------------------------------------------ 190 (325)
T ss_dssp CEEEEECCSHHHHHHHHHHTTTCSEEEEECSSSSCCSC------------------------------------------
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCEEEEEeCCCcCCcc------------------------------------------
Confidence 57999999999999999999999999999987543100
Q ss_pred eeEEeccCCCCCCCCceeeeehHHHHHHHhhhCCCCeEEeCceEEEEEecCCCCCccEEEEeC---CCc--EEEccEEEe
Q 044609 86 TQELSYAGKSGRIGSGLRSVHRQSLLEALADELPDDTIQFSSKIAAIDSQTLNGSSAAIINLG---DST--IIKAKVLIG 160 (232)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~i~~~~~v~~i~~~~~~g~~~~~v~~~---~g~--~~~a~~vV~ 160 (232)
..+.+.+.+. .+++++.+++|+++..+ +.. ..|.+. +|+ ++.+|.||.
T Consensus 191 ----------------------~~~~~~l~~~-~gv~i~~~~~v~~i~~~---~~v-~~v~~~~~~~g~~~~i~~D~vi~ 243 (325)
T 2q7v_A 191 ----------------------KVAQARAFAN-PKMKFIWDTAVEEIQGA---DSV-SGVKLRNLKTGEVSELATDGVFI 243 (325)
T ss_dssp ----------------------HHHHHHHHTC-TTEEEECSEEEEEEEES---SSE-EEEEEEETTTCCEEEEECSEEEE
T ss_pred ----------------------hHHHHHHHhc-CCceEecCCceEEEccC---CcE-EEEEEEECCCCcEEEEEcCEEEE
Confidence 0122223221 37899999999999864 332 344443 564 789999999
Q ss_pred cCCCchh
Q 044609 161 CDGVHSM 167 (232)
Q Consensus 161 A~G~~S~ 167 (232)
|+|....
T Consensus 244 a~G~~p~ 250 (325)
T 2q7v_A 244 FIGHVPN 250 (325)
T ss_dssp CSCEEES
T ss_pred ccCCCCC
Confidence 9998653
No 251
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=98.31 E-value=9.8e-06 Score=66.44 Aligned_cols=98 Identities=14% Similarity=0.140 Sum_probs=68.9
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCcEEEEecCCCCcCcceeeeecccHHHHHHHcCChHHHHhhccCceeeEEEEcCCCc
Q 044609 6 EDVVIIGAGIAGLATAVALRRLGIKALVLEKSDGLRATGAALTLSPNAWLALDALGVSHKLTSVYAPAKRVFVTNLGTGA 85 (232)
Q Consensus 6 ~dV~IvG~G~~G~~~A~~L~~~g~~v~viE~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 85 (232)
.+|+|||+|..|+-+|..|++.|.+|+++++...... +..
T Consensus 186 ~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~l~~-------------------~d~--------------------- 225 (488)
T 3dgz_A 186 GKTLVVGASYVALECAGFLTGIGLDTTVMMRSIPLRG-------------------FDQ--------------------- 225 (488)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEESSCSSTT-------------------SCH---------------------
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCceEEEEcCccccc-------------------CCH---------------------
Confidence 5799999999999999999999999999997532100 000
Q ss_pred eeEEeccCCCCCCCCceeeeehHHHHHHHhhhCCCCeEEeCceEEEEEecCCCCCccEEEEeCC---Cc--EEEccEEEe
Q 044609 86 TQELSYAGKSGRIGSGLRSVHRQSLLEALADELPDDTIQFSSKIAAIDSQTLNGSSAAIINLGD---ST--IIKAKVLIG 160 (232)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~i~~~~~v~~i~~~~~~g~~~~~v~~~~---g~--~~~a~~vV~ 160 (232)
-....+.+.|.+. +++++.++++.++...+ +.. +.+.+.+ |+ ++.+|.||.
T Consensus 226 -------------------~~~~~l~~~l~~~--gv~~~~~~~v~~i~~~~--~~~-~~v~~~~~~~g~~~~~~~D~vi~ 281 (488)
T 3dgz_A 226 -------------------QMSSLVTEHMESH--GTQFLKGCVPSHIKKLP--TNQ-LQVTWEDHASGKEDTGTFDTVLW 281 (488)
T ss_dssp -------------------HHHHHHHHHHHHT--TCEEEETEEEEEEEECT--TSC-EEEEEEETTTTEEEEEEESEEEE
T ss_pred -------------------HHHHHHHHHHHHC--CCEEEeCCEEEEEEEcC--CCc-EEEEEEeCCCCeeEEEECCEEEE
Confidence 0112334444443 89999999999998754 232 4454433 54 578999999
Q ss_pred cCCCchh
Q 044609 161 CDGVHSM 167 (232)
Q Consensus 161 A~G~~S~ 167 (232)
|+|....
T Consensus 282 a~G~~p~ 288 (488)
T 3dgz_A 282 AIGRVPE 288 (488)
T ss_dssp CSCEEES
T ss_pred cccCCcc
Confidence 9998654
No 252
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=98.31 E-value=7.1e-07 Score=76.07 Aligned_cols=36 Identities=25% Similarity=0.488 Sum_probs=33.7
Q ss_pred cccEEEECCCHHHHHHHHHHHhCCCcEEEEecCCCC
Q 044609 5 EEDVVIIGAGIAGLATAVALRRLGIKALVLEKSDGL 40 (232)
Q Consensus 5 ~~dV~IvG~G~~G~~~A~~L~~~g~~v~viE~~~~~ 40 (232)
.+||+|||||++|+++|..|++.|++|+|||+.+..
T Consensus 373 ~~~vvIIGgG~AGl~aA~~l~~~g~~V~lie~~~~~ 408 (671)
T 1ps9_A 373 KKNLAVVGAGPAGLAFAINAAARGHQVTLFDAHSEI 408 (671)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCC
Confidence 479999999999999999999999999999998765
No 253
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A
Probab=98.31 E-value=6.5e-07 Score=76.14 Aligned_cols=37 Identities=38% Similarity=0.680 Sum_probs=34.3
Q ss_pred cccEEEECCCHHHHHHHHHHHhCCCcEEEEecCCCCc
Q 044609 5 EEDVVIIGAGIAGLATAVALRRLGIKALVLEKSDGLR 41 (232)
Q Consensus 5 ~~dV~IvG~G~~G~~~A~~L~~~g~~v~viE~~~~~~ 41 (232)
.+||+|||||++|+++|..|++.|++|+|+|+.+.++
T Consensus 107 ~~~v~viG~G~~gl~~a~~l~~~g~~v~~~e~~~~~g 143 (662)
T 2z3y_A 107 TGKVIIIGSGVSGLAAARQLQSFGMDVTLLEARDRVG 143 (662)
T ss_dssp CCEEEEECCBHHHHHHHHHHHHTTCEEEEECSSSSSB
T ss_pred CCeEEEECcCHHHHHHHHHHHHCCCeEEEEecCCCCC
Confidence 4799999999999999999999999999999987653
No 254
>3q9t_A Choline dehydrogenase and related flavoproteins; glucose-methanol-choline oxidoreductase family, formate OXID formyl-FAD, oxidoreductase; HET: FAY; 2.24A {Aspergillus oryzae}
Probab=98.30 E-value=5e-07 Score=75.36 Aligned_cols=36 Identities=33% Similarity=0.434 Sum_probs=33.5
Q ss_pred ccccEEEECCCHHHHHHHHHHHhCC-CcEEEEecCCC
Q 044609 4 VEEDVVIIGAGIAGLATAVALRRLG-IKALVLEKSDG 39 (232)
Q Consensus 4 ~~~dV~IvG~G~~G~~~A~~L~~~g-~~v~viE~~~~ 39 (232)
.+||+||||||.||+++|..|++.+ .+|+|||+++.
T Consensus 5 ~~yDyIVVGgG~AG~v~A~rLse~~~~~VLllEaG~~ 41 (577)
T 3q9t_A 5 SHFDFVIVGGGTAGNTVAGRLAENPNVTVLIVEAGIG 41 (577)
T ss_dssp CEEEEEEESCSHHHHHHHHHHTTSTTSCEEEECSSCS
T ss_pred CcccEEEECCcHHHHHHHHHHHhCCCCcEEEEecCCC
Confidence 4699999999999999999999987 79999999876
No 255
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=98.30 E-value=7.7e-06 Score=62.79 Aligned_cols=94 Identities=17% Similarity=0.268 Sum_probs=68.0
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCcEEEEecCCCCcCcceeeeecccHHHHHHHcCChHHHHhhccCceeeEEEEcCCCc
Q 044609 6 EDVVIIGAGIAGLATAVALRRLGIKALVLEKSDGLRATGAALTLSPNAWLALDALGVSHKLTSVYAPAKRVFVTNLGTGA 85 (232)
Q Consensus 6 ~dV~IvG~G~~G~~~A~~L~~~g~~v~viE~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 85 (232)
.+|+|||+|+.|+-+|..|++.|.+|+++++.+.+...
T Consensus 148 ~~v~viG~g~~~~e~a~~l~~~g~~v~~~~~~~~~~~~------------------------------------------ 185 (315)
T 3r9u_A 148 KEVAVLGGGDTALEEALYLANICSKIYLIHRRDEFRAA------------------------------------------ 185 (315)
T ss_dssp SEEEEECCBHHHHHHHHHHHTTSSEEEEECSSSSCBSC------------------------------------------
T ss_pred CEEEEECCCHHHHHHHHHHHhhCCEEEEEEeCCCCCCC------------------------------------------
Confidence 57999999999999999999999999999987543100
Q ss_pred eeEEeccCCCCCCCCceeeeehHHHHHHHhhhCCCCeEEeCceEEEEEecCCCCCc-cEEEEeCCCc--EEEccEEEecC
Q 044609 86 TQELSYAGKSGRIGSGLRSVHRQSLLEALADELPDDTIQFSSKIAAIDSQTLNGSS-AAIINLGDST--IIKAKVLIGCD 162 (232)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~i~~~~~v~~i~~~~~~g~~-~~~v~~~~g~--~~~a~~vV~A~ 162 (232)
..+.+.+.+ ..+++++++++|.++..++ +.. .+.+...+|+ ++.+|.||.|.
T Consensus 186 ----------------------~~~~~~~~~-~~gv~~~~~~~v~~i~~~~--~~~~~v~~~~~~g~~~~~~~D~vv~a~ 240 (315)
T 3r9u_A 186 ----------------------PSTVEKVKK-NEKIELITSASVDEVYGDK--MGVAGVKVKLKDGSIRDLNVPGIFTFV 240 (315)
T ss_dssp ----------------------HHHHHHHHH-CTTEEEECSCEEEEEEEET--TEEEEEEEECTTSCEEEECCSCEEECS
T ss_pred ----------------------HHHHHHHHh-cCCeEEEeCcEEEEEEcCC--CcEEEEEEEcCCCCeEEeecCeEEEEE
Confidence 011222222 2388999999999998764 232 1333334775 78999999999
Q ss_pred CCch
Q 044609 163 GVHS 166 (232)
Q Consensus 163 G~~S 166 (232)
|...
T Consensus 241 G~~p 244 (315)
T 3r9u_A 241 GLNV 244 (315)
T ss_dssp CEEE
T ss_pred cCCC
Confidence 9764
No 256
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=98.29 E-value=5.4e-06 Score=64.37 Aligned_cols=96 Identities=11% Similarity=0.157 Sum_probs=69.6
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCcEEEEecCCCCcCcceeeeecccHHHHHHHcCChHHHHhhccCceeeEEEEcCCCc
Q 044609 6 EDVVIIGAGIAGLATAVALRRLGIKALVLEKSDGLRATGAALTLSPNAWLALDALGVSHKLTSVYAPAKRVFVTNLGTGA 85 (232)
Q Consensus 6 ~dV~IvG~G~~G~~~A~~L~~~g~~v~viE~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 85 (232)
.+|+|||+|.+|+-+|..|++.|.+|+++++.+.+... + .
T Consensus 153 ~~v~viG~G~~g~e~a~~l~~~g~~V~~v~~~~~~~~~-------~---~------------------------------ 192 (335)
T 2zbw_A 153 KRVLIVGGGDSAVDWALNLLDTARRITLIHRRPQFRAH-------E---A------------------------------ 192 (335)
T ss_dssp CEEEEECSSHHHHHHHHHTTTTSSEEEEECSSSSCCSC-------H---H------------------------------
T ss_pred CEEEEECCCHHHHHHHHHHHhhCCEEEEEEcCCccCcc-------H---H------------------------------
Confidence 58999999999999999999999999999987643110 0 0
Q ss_pred eeEEeccCCCCCCCCceeeeehHHHHHHHhhhCCCCeEEeCceEEEEEecCCCCCccEEEEeC---CC--cEEEccEEEe
Q 044609 86 TQELSYAGKSGRIGSGLRSVHRQSLLEALADELPDDTIQFSSKIAAIDSQTLNGSSAAIINLG---DS--TIIKAKVLIG 160 (232)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~i~~~~~v~~i~~~~~~g~~~~~v~~~---~g--~~~~a~~vV~ 160 (232)
....+.+.+.+ .+++++.+++|.++..+ +.. ..|.+. +| .++.+|.||.
T Consensus 193 --------------------~~~~l~~~l~~--~gv~v~~~~~v~~i~~~---~~~-~~v~~~~~~~g~~~~i~~D~vi~ 246 (335)
T 2zbw_A 193 --------------------SVKELMKAHEE--GRLEVLTPYELRRVEGD---ERV-RWAVVFHNQTQEELALEVDAVLI 246 (335)
T ss_dssp --------------------HHHHHHHHHHT--TSSEEETTEEEEEEEES---SSE-EEEEEEETTTCCEEEEECSEEEE
T ss_pred --------------------HHHHHHhcccc--CCeEEecCCcceeEccC---CCe-eEEEEEECCCCceEEEecCEEEE
Confidence 01123333433 28899999999999874 332 344444 66 5799999999
Q ss_pred cCCCchh
Q 044609 161 CDGVHSM 167 (232)
Q Consensus 161 A~G~~S~ 167 (232)
|+|..+.
T Consensus 247 a~G~~p~ 253 (335)
T 2zbw_A 247 LAGYITK 253 (335)
T ss_dssp CCCEEEE
T ss_pred eecCCCC
Confidence 9998764
No 257
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=98.29 E-value=4.4e-06 Score=67.74 Aligned_cols=97 Identities=21% Similarity=0.270 Sum_probs=68.1
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCcEEEEecCCCCcCcceeeeecccHHHHHHHcCChHHHHhhccCceeeEEEEcCCCc
Q 044609 6 EDVVIIGAGIAGLATAVALRRLGIKALVLEKSDGLRATGAALTLSPNAWLALDALGVSHKLTSVYAPAKRVFVTNLGTGA 85 (232)
Q Consensus 6 ~dV~IvG~G~~G~~~A~~L~~~g~~v~viE~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 85 (232)
.+|+|||+|..|+-+|..|++.|.+|+++++.+.+....
T Consensus 149 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~----------------------------------------- 187 (449)
T 3kd9_A 149 ENVVIIGGGYIGIEMAEAFAAQGKNVTMIVRGERVLRRS----------------------------------------- 187 (449)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTTTT-----------------------------------------
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCeEEEEEcCCccchhh-----------------------------------------
Confidence 489999999999999999999999999999876431100
Q ss_pred eeEEeccCCCCCCCCceeeeehHHHHHHHhhhCCCCeEEeCceEEEEEecCCCCCccEEEEeCCCcEEEccEEEecCCCc
Q 044609 86 TQELSYAGKSGRIGSGLRSVHRQSLLEALADELPDDTIQFSSKIAAIDSQTLNGSSAAIINLGDSTIIKAKVLIGCDGVH 165 (232)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~i~~~~~v~~i~~~~~~g~~~~~v~~~~g~~~~a~~vV~A~G~~ 165 (232)
. .. -....+.+.|.+ .++++.+++|.++..+ +. +.....+++++.||.||.|+|..
T Consensus 188 ---------~---~~----~~~~~l~~~l~~---~v~i~~~~~v~~i~~~---~~--v~~v~~~g~~i~~D~Vv~a~G~~ 243 (449)
T 3kd9_A 188 ---------F---DK----EVTDILEEKLKK---HVNLRLQEITMKIEGE---ER--VEKVVTDAGEYKAELVILATGIK 243 (449)
T ss_dssp ---------S---CH----HHHHHHHHHHTT---TSEEEESCCEEEEECS---SS--CCEEEETTEEEECSEEEECSCEE
T ss_pred ---------c---CH----HHHHHHHHHHHh---CcEEEeCCeEEEEecc---Cc--EEEEEeCCCEEECCEEEEeeCCc
Confidence 0 00 011223333332 2889999999999754 22 32234567789999999999987
Q ss_pred hh
Q 044609 166 SM 167 (232)
Q Consensus 166 S~ 167 (232)
..
T Consensus 244 p~ 245 (449)
T 3kd9_A 244 PN 245 (449)
T ss_dssp EC
T ss_pred cC
Confidence 43
No 258
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=98.29 E-value=1.3e-06 Score=68.70 Aligned_cols=97 Identities=20% Similarity=0.271 Sum_probs=68.6
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCcEEEEecCCCCcCcceeeeecccHHHHHHHcCChHHHHhhccCceeeEEEEcCCCc
Q 044609 6 EDVVIIGAGIAGLATAVALRRLGIKALVLEKSDGLRATGAALTLSPNAWLALDALGVSHKLTSVYAPAKRVFVTNLGTGA 85 (232)
Q Consensus 6 ~dV~IvG~G~~G~~~A~~L~~~g~~v~viE~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 85 (232)
.+|+|||+|++|+-+|..|++.|.+|+++++.+.+... + .
T Consensus 164 ~~vvVvG~G~~g~e~A~~l~~~g~~V~lv~~~~~~~~~-------~---~------------------------------ 203 (360)
T 3ab1_A 164 KRVVIVGGGDSALDWTVGLIKNAASVTLVHRGHEFQGH-------G---K------------------------------ 203 (360)
T ss_dssp CEEEEECSSHHHHHHHHHTTTTSSEEEEECSSSSCSSC-------S---H------------------------------
T ss_pred CcEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCCCCCC-------H---H------------------------------
Confidence 47999999999999999999999999999987643110 0 0
Q ss_pred eeEEeccCCCCCCCCceeeeehHHHHHHHhhhCCCCeEEeCceEEEEEecCCCCCccEEEEe--CCC--cEEEccEEEec
Q 044609 86 TQELSYAGKSGRIGSGLRSVHRQSLLEALADELPDDTIQFSSKIAAIDSQTLNGSSAAIINL--GDS--TIIKAKVLIGC 161 (232)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~i~~~~~v~~i~~~~~~g~~~~~v~~--~~g--~~~~a~~vV~A 161 (232)
....+.+.+.+ .+++++++++|+++..++ +.. ..|.+ .+| .++.+|.||.|
T Consensus 204 --------------------~~~~l~~~~~~--~gv~i~~~~~v~~i~~~~--~~v-~~v~~~~~~g~~~~i~~D~vi~a 258 (360)
T 3ab1_A 204 --------------------TAHEVERARAN--GTIDVYLETEVASIEESN--GVL-TRVHLRSSDGSKWTVEADRLLIL 258 (360)
T ss_dssp --------------------HHHSSHHHHHH--TSEEEESSEEEEEEEEET--TEE-EEEEEEETTCCEEEEECSEEEEC
T ss_pred --------------------HHHHHHHHhhc--CceEEEcCcCHHHhccCC--Cce-EEEEEEecCCCeEEEeCCEEEEC
Confidence 00111222222 278999999999998763 332 23444 477 57999999999
Q ss_pred CCCchh
Q 044609 162 DGVHSM 167 (232)
Q Consensus 162 ~G~~S~ 167 (232)
+|....
T Consensus 259 ~G~~p~ 264 (360)
T 3ab1_A 259 IGFKSN 264 (360)
T ss_dssp CCBCCS
T ss_pred CCCCCC
Confidence 997654
No 259
>2xag_A Lysine-specific histone demethylase 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_A* 2xah_A* 2xaj_A* 2xaq_A* 2xas_A* 2com_A
Probab=98.28 E-value=8.2e-07 Score=77.12 Aligned_cols=37 Identities=38% Similarity=0.680 Sum_probs=34.2
Q ss_pred cccEEEECCCHHHHHHHHHHHhCCCcEEEEecCCCCc
Q 044609 5 EEDVVIIGAGIAGLATAVALRRLGIKALVLEKSDGLR 41 (232)
Q Consensus 5 ~~dV~IvG~G~~G~~~A~~L~~~g~~v~viE~~~~~~ 41 (232)
.++|+|||||++|+++|+.|+++|++|+|+|+.+.++
T Consensus 278 ~~~v~viG~G~aGl~~A~~l~~~g~~v~v~E~~~~~G 314 (852)
T 2xag_A 278 TGKVIIIGSGVSGLAAARQLQSFGMDVTLLEARDRVG 314 (852)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSC
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCcEEEEEecCcCC
Confidence 4799999999999999999999999999999987653
No 260
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=98.28 E-value=9.9e-06 Score=62.16 Aligned_cols=94 Identities=18% Similarity=0.248 Sum_probs=68.0
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCcEEEEecCCCCcCcceeeeecccHHHHHHHcCChHHHHhhccCceeeEEEEcCCCc
Q 044609 6 EDVVIIGAGIAGLATAVALRRLGIKALVLEKSDGLRATGAALTLSPNAWLALDALGVSHKLTSVYAPAKRVFVTNLGTGA 85 (232)
Q Consensus 6 ~dV~IvG~G~~G~~~A~~L~~~g~~v~viE~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 85 (232)
.+|+|||+|++|+-+|..|++.|.+|+++++.+.+...
T Consensus 145 ~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~------------------------------------------ 182 (310)
T 1fl2_A 145 KRVAVIGGGNSGVEAAIDLAGIVEHVTLLEFAPEMKAD------------------------------------------ 182 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTBSEEEEECSSSSCCSC------------------------------------------
T ss_pred CEEEEECCCHHHHHHHHHHHHhCCEEEEEEeCcccCcc------------------------------------------
Confidence 57999999999999999999999999999987543100
Q ss_pred eeEEeccCCCCCCCCceeeeehHHHHHHHhhhCCCCeEEeCceEEEEEecCCCCCccEEEEeC---CCc--EEEccEEEe
Q 044609 86 TQELSYAGKSGRIGSGLRSVHRQSLLEALADELPDDTIQFSSKIAAIDSQTLNGSSAAIINLG---DST--IIKAKVLIG 160 (232)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~i~~~~~v~~i~~~~~~g~~~~~v~~~---~g~--~~~a~~vV~ 160 (232)
..+.+.|.+ ..+++++.+++++++..++ +.. ..|.+. +|+ ++.+|.||.
T Consensus 183 ----------------------~~~~~~l~~-~~gv~v~~~~~v~~i~~~~--~~v-~~v~~~~~~~g~~~~i~~D~vi~ 236 (310)
T 1fl2_A 183 ----------------------QVLQDKLRS-LKNVDIILNAQTTEVKGDG--SKV-VGLEYRDRVSGDIHNIELAGIFV 236 (310)
T ss_dssp ----------------------HHHHHHHHT-CTTEEEESSEEEEEEEESS--SSE-EEEEEEETTTCCEEEEECSEEEE
T ss_pred ----------------------HHHHHHHhh-CCCeEEecCCceEEEEcCC--CcE-EEEEEEECCCCcEEEEEcCEEEE
Confidence 012333333 2378999999999998653 332 244443 353 689999999
Q ss_pred cCCCchh
Q 044609 161 CDGVHSM 167 (232)
Q Consensus 161 A~G~~S~ 167 (232)
|+|....
T Consensus 237 a~G~~p~ 243 (310)
T 1fl2_A 237 QIGLLPN 243 (310)
T ss_dssp CSCEEES
T ss_pred eeCCccC
Confidence 9997653
No 261
>2jbv_A Choline oxidase; alcohol oxidation, flavoenyzme oxidase, covalently linked FAD, C4A-adduct, flavoprotein, oxidoreductase; HET: FAO; 1.86A {Arthrobacter globiformis} PDB: 3nne_A* 3ljp_A*
Probab=98.26 E-value=7.2e-07 Score=74.13 Aligned_cols=40 Identities=25% Similarity=0.335 Sum_probs=35.1
Q ss_pred CCcccccEEEECCCHHHHHHHHHHHhC-CCcEEEEecCCCC
Q 044609 1 MEMVEEDVVIIGAGIAGLATAVALRRL-GIKALVLEKSDGL 40 (232)
Q Consensus 1 m~~~~~dV~IvG~G~~G~~~A~~L~~~-g~~v~viE~~~~~ 40 (232)
|..+++|++|||+|++|+++|..|++. |.+|+|||++...
T Consensus 9 ~~~~~~d~~ivG~G~~G~~~a~~l~~~~~~~v~~~e~g~~~ 49 (546)
T 2jbv_A 9 LSDREFDYIVVGGGSAGAAVAARLSEDPAVSVALVEAGPDD 49 (546)
T ss_dssp CCCCEEEEEEECCSHHHHHHHHHHTTSTTSCEEEECSSCCC
T ss_pred cccCcCCEEEECcCHHHHHHHHHHHhCCCCCEEEEecCCcC
Confidence 334569999999999999999999998 8999999998643
No 262
>3qvp_A Glucose oxidase; oxidoreductase; HET: NAG BMA MAN FAD; 1.20A {Aspergillus niger} PDB: 1gal_A* 1cf3_A* 3qvr_A*
Probab=98.24 E-value=8.1e-07 Score=74.14 Aligned_cols=35 Identities=37% Similarity=0.564 Sum_probs=32.4
Q ss_pred ccccEEEECCCHHHHHHHHHHHhC-CCcEEEEecCC
Q 044609 4 VEEDVVIIGAGIAGLATAVALRRL-GIKALVLEKSD 38 (232)
Q Consensus 4 ~~~dV~IvG~G~~G~~~A~~L~~~-g~~v~viE~~~ 38 (232)
.+||+||||||.+|+++|..|++. +.+|+|||+++
T Consensus 18 ~~yDyIIVGgG~AG~vlA~RLse~~~~~VLlLEaG~ 53 (583)
T 3qvp_A 18 RTVDYIIAGGGLTGLTTAARLTENPNISVLVIESGS 53 (583)
T ss_dssp CEEEEEEECCSHHHHHHHHHHTTSTTCCEEEECSSC
T ss_pred CCccEEEECCcHHHHHHHHHHHhCCCCcEEEEecCC
Confidence 459999999999999999999974 89999999987
No 263
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=98.23 E-value=1.4e-05 Score=62.05 Aligned_cols=95 Identities=16% Similarity=0.240 Sum_probs=67.5
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCcEEEEecCCCCcCcceeeeecccHHHHHHHcCChHHHHhhccCceeeEEEEcCCCc
Q 044609 6 EDVVIIGAGIAGLATAVALRRLGIKALVLEKSDGLRATGAALTLSPNAWLALDALGVSHKLTSVYAPAKRVFVTNLGTGA 85 (232)
Q Consensus 6 ~dV~IvG~G~~G~~~A~~L~~~g~~v~viE~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 85 (232)
.+|+|||+|.+|+-+|..|++.|.+|+++++.+.+..
T Consensus 160 ~~v~VvG~G~~g~e~A~~l~~~g~~V~lv~~~~~~~~------------------------------------------- 196 (333)
T 1vdc_A 160 KPLAVIGGGDSAMEEANFLTKYGSKVYIIHRRDAFRA------------------------------------------- 196 (333)
T ss_dssp SEEEEECCSHHHHHHHHHHTTTSSEEEEECSSSSCCS-------------------------------------------
T ss_pred CeEEEECCChHHHHHHHHHHhcCCeEEEEecCCcCCc-------------------------------------------
Confidence 5899999999999999999999999999998764310
Q ss_pred eeEEeccCCCCCCCCceeeeehHHHHHHHhhhCCCCeEEeCceEEEEEecCCCC-CccEEEEeC---CC--cEEEccEEE
Q 044609 86 TQELSYAGKSGRIGSGLRSVHRQSLLEALADELPDDTIQFSSKIAAIDSQTLNG-SSAAIINLG---DS--TIIKAKVLI 159 (232)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~i~~~~~v~~i~~~~~~g-~~~~~v~~~---~g--~~~~a~~vV 159 (232)
...+.+.+.+. .+++++++++|.++..+++ + .. ..+.+. +| .++.||.||
T Consensus 197 ---------------------~~~~~~~~~~~-~gv~i~~~~~v~~i~~~~~-~~~v-~~v~~~~~~~g~~~~i~~D~vi 252 (333)
T 1vdc_A 197 ---------------------SKIMQQRALSN-PKIDVIWNSSVVEAYGDGE-RDVL-GGLKVKNVVTGDVSDLKVSGLF 252 (333)
T ss_dssp ---------------------CHHHHHHHHTC-TTEEEECSEEEEEEEESSS-SSSE-EEEEEEETTTCCEEEEECSEEE
T ss_pred ---------------------cHHHHHHHHhC-CCeeEecCCceEEEeCCCC-ccce-eeEEEEecCCCceEEEecCEEE
Confidence 00112222221 3789999999999987531 1 22 234443 45 478999999
Q ss_pred ecCCCchh
Q 044609 160 GCDGVHSM 167 (232)
Q Consensus 160 ~A~G~~S~ 167 (232)
.|+|....
T Consensus 253 ~a~G~~p~ 260 (333)
T 1vdc_A 253 FAIGHEPA 260 (333)
T ss_dssp ECSCEEES
T ss_pred EEeCCccc
Confidence 99998754
No 264
>1n4w_A CHOD, cholesterol oxidase; flavoenzyme, steroid metabolism, oxidoreductase, atomic RESO; HET: FAD; 0.92A {Streptomyces SP} SCOP: c.3.1.2 d.16.1.1 PDB: 1b4v_A* 1n1p_A* 1n4u_A* 1n4v_A* 1mxt_A* 2gew_A* 1b8s_A* 3gyi_A* 1cc2_A* 3gyj_A* 1ijh_A* 1cbo_A* 3b3r_A* 3b6d_A* 3cnj_A*
Probab=98.22 E-value=1.2e-06 Score=72.22 Aligned_cols=37 Identities=27% Similarity=0.355 Sum_probs=33.6
Q ss_pred cccccEEEECCCHHHHHHHHHHHhCCCcEEEEecCCC
Q 044609 3 MVEEDVVIIGAGIAGLATAVALRRLGIKALVLEKSDG 39 (232)
Q Consensus 3 ~~~~dV~IvG~G~~G~~~A~~L~~~g~~v~viE~~~~ 39 (232)
+.++|++|||+|++|+++|..|++.|.+|+|||++..
T Consensus 3 ~~~~d~~iiG~G~~g~~~a~~l~~~~~~v~~~e~~~~ 39 (504)
T 1n4w_A 3 GGYVPAVVIGTGYGAAVSALRLGEAGVQTLMLEMGQL 39 (504)
T ss_dssp -CEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCC
T ss_pred CCcCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCCC
Confidence 3568999999999999999999999999999999863
No 265
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=98.22 E-value=1.2e-06 Score=78.03 Aligned_cols=36 Identities=31% Similarity=0.527 Sum_probs=33.2
Q ss_pred cccEEEECCCHHHHHHHHHHHhCCC-cEEEEecCCCC
Q 044609 5 EEDVVIIGAGIAGLATAVALRRLGI-KALVLEKSDGL 40 (232)
Q Consensus 5 ~~dV~IvG~G~~G~~~A~~L~~~g~-~v~viE~~~~~ 40 (232)
.+||+||||||+|+++|..|++.|+ +|+|||+.+.+
T Consensus 187 ~~~VvVIGgGpAGl~aA~~L~~~G~~~Vtv~E~~~~~ 223 (1025)
T 1gte_A 187 SAKIALLGAGPASISCASFLARLGYSDITIFEKQEYV 223 (1025)
T ss_dssp GCCEEEECCSHHHHHHHHHHHHTTCCCEEEEESSSSC
T ss_pred CCEEEEECccHHHHHHHHHHHhcCCCcEEEEeCCCCC
Confidence 4799999999999999999999999 79999998654
No 266
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=98.21 E-value=1.5e-05 Score=61.34 Aligned_cols=93 Identities=16% Similarity=0.228 Sum_probs=68.9
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCcEEEEecCCCCcCcceeeeecccHHHHHHHcCChHHHHhhccCceeeEEEEcCCCc
Q 044609 6 EDVVIIGAGIAGLATAVALRRLGIKALVLEKSDGLRATGAALTLSPNAWLALDALGVSHKLTSVYAPAKRVFVTNLGTGA 85 (232)
Q Consensus 6 ~dV~IvG~G~~G~~~A~~L~~~g~~v~viE~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 85 (232)
.+|+|||+|+.|+-+|..|++.|.+|+++++.+.+...
T Consensus 155 ~~v~vvG~G~~~~e~a~~l~~~g~~v~~~~~~~~~~~~------------------------------------------ 192 (323)
T 3f8d_A 155 RVVAVIGGGDSALEGAEILSSYSTKVYLIHRRDTFKAQ------------------------------------------ 192 (323)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSSEEEEECSSSSCCSC------------------------------------------
T ss_pred CEEEEECCCHHHHHHHHHHHHhCCeEEEEEeCCCCCcC------------------------------------------
Confidence 58999999999999999999999999999987543110
Q ss_pred eeEEeccCCCCCCCCceeeeehHHHHHHHhhhCCCCeEEeCceEEEEEecCCCCCccEEEEeCC---Cc--EEEccEEEe
Q 044609 86 TQELSYAGKSGRIGSGLRSVHRQSLLEALADELPDDTIQFSSKIAAIDSQTLNGSSAAIINLGD---ST--IIKAKVLIG 160 (232)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~i~~~~~v~~i~~~~~~g~~~~~v~~~~---g~--~~~a~~vV~ 160 (232)
..+.+.+.+ ..+++++.+++|+++..+ +.. ..|.+.+ |+ ++.+|.||.
T Consensus 193 ----------------------~~~~~~~~~-~~gv~~~~~~~v~~i~~~---~~~-~~v~~~~~~~g~~~~~~~D~vv~ 245 (323)
T 3f8d_A 193 ----------------------PIYVETVKK-KPNVEFVLNSVVKEIKGD---KVV-KQVVVENLKTGEIKELNVNGVFI 245 (323)
T ss_dssp ----------------------HHHHHHHHT-CTTEEEECSEEEEEEEES---SSE-EEEEEEETTTCCEEEEECSEEEE
T ss_pred ----------------------HHHHHHHHh-CCCcEEEeCCEEEEEecc---Cce-eEEEEEECCCCceEEEEcCEEEE
Confidence 012233332 137899999999999865 233 4455544 65 799999999
Q ss_pred cCCCchh
Q 044609 161 CDGVHSM 167 (232)
Q Consensus 161 A~G~~S~ 167 (232)
|.|....
T Consensus 246 a~G~~p~ 252 (323)
T 3f8d_A 246 EIGFDPP 252 (323)
T ss_dssp CCCEECC
T ss_pred EECCCCC
Confidence 9998754
No 267
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=98.19 E-value=3.4e-06 Score=70.75 Aligned_cols=56 Identities=21% Similarity=0.285 Sum_probs=44.4
Q ss_pred ccccEEEECCCHHHHHHHHHHHhCCCcEEEEecCCCCcCcceeeeecccHHHHHHHc
Q 044609 4 VEEDVVIIGAGIAGLATAVALRRLGIKALVLEKSDGLRATGAALTLSPNAWLALDAL 60 (232)
Q Consensus 4 ~~~dV~IvG~G~~G~~~A~~L~~~g~~v~viE~~~~~~~~~~~~~~~~~~~~~l~~~ 60 (232)
++|||+|||+|+.|+.+|..|++.|.+|++|||++..+.....+.+ ....+++++.
T Consensus 7 ~~~D~~i~GtGl~~~~~a~~~~~~g~~vl~id~~~~~gg~~~~~~l-~~l~~w~~~~ 62 (650)
T 1vg0_A 7 SDFDVIVIGTGLPESIIAAACSRSGQRVLHVDSRSYYGGNWASFSF-SGLLSWLKEY 62 (650)
T ss_dssp SBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCEECH-HHHHHHHHHT
T ss_pred CcCCEEEECCcHHHHHHHHHHHhCCCEEEEEcCCCcccCccccccH-HHHHHHHHHh
Confidence 4699999999999999999999999999999999988655444443 2344444444
No 268
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=98.16 E-value=1.5e-06 Score=70.66 Aligned_cols=37 Identities=24% Similarity=0.261 Sum_probs=33.4
Q ss_pred ccccEEEECCCHHHHHHHHHHHhCC--CcEEEEecCCCC
Q 044609 4 VEEDVVIIGAGIAGLATAVALRRLG--IKALVLEKSDGL 40 (232)
Q Consensus 4 ~~~dV~IvG~G~~G~~~A~~L~~~g--~~v~viE~~~~~ 40 (232)
..+||+|||||++|+.+|..|++.| ++|+|||+.+.+
T Consensus 5 ~~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~vie~~~~~ 43 (460)
T 1cjc_A 5 QTPQICVVGSGPAGFYTAQHLLKHHSRAHVDIYEKQLVP 43 (460)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHHCSSCEEEEECSSSSS
T ss_pred CCceEEEECcCHHHHHHHHHHHhcCCCCCEEEEeCCCcC
Confidence 3479999999999999999999988 999999998765
No 269
>3fim_B ARYL-alcohol oxidase; AAO, lignin degradation, oxidoreductase, flavoprotein; HET: FAD; 2.55A {Pleurotus eryngii}
Probab=98.16 E-value=8e-07 Score=73.98 Aligned_cols=36 Identities=36% Similarity=0.433 Sum_probs=32.9
Q ss_pred cccEEEECCCHHHHHHHHHHHh-CCCcEEEEecCCCC
Q 044609 5 EEDVVIIGAGIAGLATAVALRR-LGIKALVLEKSDGL 40 (232)
Q Consensus 5 ~~dV~IvG~G~~G~~~A~~L~~-~g~~v~viE~~~~~ 40 (232)
+||+||||||.+|+++|..|++ .+.+|+|||+++..
T Consensus 2 ~yD~IIVG~G~aG~v~A~rLse~~~~~VlllEaG~~~ 38 (566)
T 3fim_B 2 DFDYVVVGAGNAGNVVAARLTEDPDVSVLVLEAGVSD 38 (566)
T ss_dssp CEEEEESCCSTTHHHHHHHHTTSTTCCEEEECSSBCC
T ss_pred CcCEEEECCcHHHHHHHHHHHhCcCCcEEEEecCCcc
Confidence 5899999999999999999998 69999999998643
No 270
>1coy_A Cholesterol oxidase; oxidoreductase(oxygen receptor); HET: AND FAD; 1.80A {Brevibacterium sterolicum} SCOP: c.3.1.2 d.16.1.1 PDB: 3cox_A*
Probab=98.15 E-value=2e-06 Score=70.80 Aligned_cols=36 Identities=25% Similarity=0.449 Sum_probs=33.4
Q ss_pred ccccEEEECCCHHHHHHHHHHHhCCCcEEEEecCCC
Q 044609 4 VEEDVVIIGAGIAGLATAVALRRLGIKALVLEKSDG 39 (232)
Q Consensus 4 ~~~dV~IvG~G~~G~~~A~~L~~~g~~v~viE~~~~ 39 (232)
.++|++|||+|++|+++|..|++.|.+|+|||++..
T Consensus 10 ~~~d~~iiG~G~~g~~~a~~l~~~~~~v~~~e~~~~ 45 (507)
T 1coy_A 10 DRVPALVIGSGYGGAVAALRLTQAGIPTQIVEMGRS 45 (507)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCC
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCcEEEEECCCC
Confidence 459999999999999999999999999999999853
No 271
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=98.14 E-value=8.5e-06 Score=67.68 Aligned_cols=35 Identities=17% Similarity=0.305 Sum_probs=32.7
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCcEEEEecCCCC
Q 044609 6 EDVVIIGAGIAGLATAVALRRLGIKALVLEKSDGL 40 (232)
Q Consensus 6 ~dV~IvG~G~~G~~~A~~L~~~g~~v~viE~~~~~ 40 (232)
.+|+|||+|.+|+-+|..|++.+.+|++++|.+..
T Consensus 186 krV~VIG~G~tgve~a~~la~~~~~Vtv~~r~~~~ 220 (545)
T 3uox_A 186 KRVGVIGTGATGVQIIPIAAETAKELYVFQRTPNW 220 (545)
T ss_dssp CEEEEECCSHHHHHHHHHHTTTBSEEEEEESSCCC
T ss_pred CeEEEECCCccHHHHHHHHHhhCCEEEEEEcCCCc
Confidence 58999999999999999999999999999998863
No 272
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=98.13 E-value=1.7e-05 Score=65.75 Aligned_cols=35 Identities=20% Similarity=0.219 Sum_probs=32.8
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCcEEEEecCCCC
Q 044609 6 EDVVIIGAGIAGLATAVALRRLGIKALVLEKSDGL 40 (232)
Q Consensus 6 ~dV~IvG~G~~G~~~A~~L~~~g~~v~viE~~~~~ 40 (232)
.+|+|||+|.+|+-+|..|++.+.+|++++|.+..
T Consensus 179 krV~VIG~G~sgve~a~~l~~~~~~Vtv~~r~~~~ 213 (540)
T 3gwf_A 179 RRVGVIGTGSTGQQVITSLAPEVEHLTVFVRTPQY 213 (540)
T ss_dssp SEEEEECCSHHHHHHHHHHTTTCSEEEEEESSCCC
T ss_pred ceEEEECCCchHHHHHHHHHhhCCEEEEEECCCCc
Confidence 58999999999999999999999999999998863
No 273
>3ayj_A Pro-enzyme of L-phenylalanine oxidase; amino acid oxidase, flavoenzyme, L- binding, oxidoreductase; HET: FAD PHE; 1.10A {Pseudomonas} PDB: 2yr4_A* 2yr6_A* 3ayi_A* 2yr5_A* 3ayl_A*
Probab=98.08 E-value=1.6e-06 Score=73.68 Aligned_cols=36 Identities=28% Similarity=0.514 Sum_probs=33.2
Q ss_pred cccEEEECCCHHHHHHHHHHHhCC--------CcEEEEecCC-CC
Q 044609 5 EEDVVIIGAGIAGLATAVALRRLG--------IKALVLEKSD-GL 40 (232)
Q Consensus 5 ~~dV~IvG~G~~G~~~A~~L~~~g--------~~v~viE~~~-~~ 40 (232)
.++|+|||||++|+++|+.|++.| ++|+|+|+.+ ..
T Consensus 56 ~~~v~IiGaGiaGL~aA~~L~~~g~~~~~~~~~~V~v~E~~~~r~ 100 (721)
T 3ayj_A 56 NYRIAIVGGGAGGIAALYELGRLAATLPAGSGIDVQIYEADPDSF 100 (721)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHTTSCTTCEEEEEEECCCTTBG
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCcccccCCCceEEEEeccCccc
Confidence 368999999999999999999988 9999999987 65
No 274
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=98.08 E-value=5.9e-05 Score=62.34 Aligned_cols=101 Identities=13% Similarity=0.102 Sum_probs=67.2
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCcEEEEecCCCCcCcceeeeecccHHHHHHHcCChHHHHhhccCceeeEEEEcCCCc
Q 044609 6 EDVVIIGAGIAGLATAVALRRLGIKALVLEKSDGLRATGAALTLSPNAWLALDALGVSHKLTSVYAPAKRVFVTNLGTGA 85 (232)
Q Consensus 6 ~dV~IvG~G~~G~~~A~~L~~~g~~v~viE~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 85 (232)
.+|+|||+|..|+-+|..|++.|.+|+++++...... +..
T Consensus 211 ~~vvVIGgG~ig~E~A~~l~~~G~~Vtlv~~~~~l~~-------------------~d~--------------------- 250 (519)
T 3qfa_A 211 GKTLVVGASYVALECAGFLAGIGLDVTVMVRSILLRG-------------------FDQ--------------------- 250 (519)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEESSCSSTT-------------------SCH---------------------
T ss_pred CeEEEECCcHHHHHHHHHHHHcCCeEEEEeccccccc-------------------CCH---------------------
Confidence 5799999999999999999999999999997421100 000
Q ss_pred eeEEeccCCCCCCCCceeeeehHHHHHHHhhhCCCCeEEeCceEEEEEecCCC-CCc-cEEEEeCCCc---EEEccEEEe
Q 044609 86 TQELSYAGKSGRIGSGLRSVHRQSLLEALADELPDDTIQFSSKIAAIDSQTLN-GSS-AAIINLGDST---IIKAKVLIG 160 (232)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~i~~~~~v~~i~~~~~~-g~~-~~~v~~~~g~---~~~a~~vV~ 160 (232)
--...+.+.|.+. +++++.++++.++...++. ... .+.+...++. ++.+|.||.
T Consensus 251 -------------------~~~~~~~~~l~~~--GV~v~~~~~v~~v~~~~~~~~~~~~v~~~~~~g~~~~~~~~D~vi~ 309 (519)
T 3qfa_A 251 -------------------DMANKIGEHMEEH--GIKFIRQFVPIKVEQIEAGTPGRLRVVAQSTNSEEIIEGEYNTVML 309 (519)
T ss_dssp -------------------HHHHHHHHHHHHT--TCEEEESEEEEEEEEEECCTTCEEEEEEEESSSSCEEEEEESEEEE
T ss_pred -------------------HHHHHHHHHHHHC--CCEEEeCCeEEEEEEccCCCCceEEEEEEECCCcEEEEEECCEEEE
Confidence 0122233444443 8999999988888764310 122 1333445552 568999999
Q ss_pred cCCCchh
Q 044609 161 CDGVHSM 167 (232)
Q Consensus 161 A~G~~S~ 167 (232)
|.|....
T Consensus 310 a~G~~p~ 316 (519)
T 3qfa_A 310 AIGRDAC 316 (519)
T ss_dssp CSCEEES
T ss_pred ecCCccc
Confidence 9998654
No 275
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=98.07 E-value=2.1e-05 Score=61.08 Aligned_cols=95 Identities=17% Similarity=0.243 Sum_probs=66.2
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCcEEEEecCCCCcCcceeeeecccHHHHHHHcCChHHHHhhccCceeeEEEEcCCCc
Q 044609 6 EDVVIIGAGIAGLATAVALRRLGIKALVLEKSDGLRATGAALTLSPNAWLALDALGVSHKLTSVYAPAKRVFVTNLGTGA 85 (232)
Q Consensus 6 ~dV~IvG~G~~G~~~A~~L~~~g~~v~viE~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 85 (232)
.+|+|||+|.+|+-+|..|++.|.+|+++++.+.+.. .
T Consensus 156 ~~v~ViG~G~~g~e~a~~l~~~g~~V~l~~~~~~~~~----------------------------------------~-- 193 (335)
T 2a87_A 156 QDIAVIGGGDSAMEEATFLTRFARSVTLVHRRDEFRA----------------------------------------S-- 193 (335)
T ss_dssp CEEEEECSSHHHHHHHHHHTTTCSEEEEECSSSSCSS----------------------------------------C--
T ss_pred CEEEEECCCHHHHHHHHHHHHhCCeEEEEEcCCcCCc----------------------------------------c--
Confidence 5899999999999999999999999999998653310 0
Q ss_pred eeEEeccCCCCCCCCceeeeehHHHHHHHhhhCCCCeEEeCceEEEEEecCCCCCccEEEEe-CCC--cEEEccEEEecC
Q 044609 86 TQELSYAGKSGRIGSGLRSVHRQSLLEALADELPDDTIQFSSKIAAIDSQTLNGSSAAIINL-GDS--TIIKAKVLIGCD 162 (232)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~i~~~~~v~~i~~~~~~g~~~~~v~~-~~g--~~~~a~~vV~A~ 162 (232)
. .+.+.+.+ ..+++++.+++|+++..++. ... +.+.. .+| .++.+|.||.|+
T Consensus 194 -------------~---------~~~~~~~~-~~gV~v~~~~~v~~i~~~~~-~~~-v~~~~~~~g~~~~i~~D~vi~a~ 248 (335)
T 2a87_A 194 -------------K---------IMLDRARN-NDKIRFLTNHTVVAVDGDTT-VTG-LRVRDTNTGAETTLPVTGVFVAI 248 (335)
T ss_dssp -------------T---------THHHHHHH-CTTEEEECSEEEEEEECSSS-CCE-EEEEEETTSCCEEECCSCEEECS
T ss_pred -------------H---------HHHHHHhc-cCCcEEEeCceeEEEecCCc-EeE-EEEEEcCCCceEEeecCEEEEcc
Confidence 0 01112222 13889999999999986531 112 33332 245 478999999999
Q ss_pred CCchh
Q 044609 163 GVHSM 167 (232)
Q Consensus 163 G~~S~ 167 (232)
|....
T Consensus 249 G~~p~ 253 (335)
T 2a87_A 249 GHEPR 253 (335)
T ss_dssp CEEEC
T ss_pred CCccC
Confidence 98653
No 276
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=98.07 E-value=4.7e-05 Score=64.04 Aligned_cols=32 Identities=31% Similarity=0.376 Sum_probs=30.3
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCcEEEEecC
Q 044609 6 EDVVIIGAGIAGLATAVALRRLGIKALVLEKS 37 (232)
Q Consensus 6 ~dV~IvG~G~~G~~~A~~L~~~g~~v~viE~~ 37 (232)
.+|+|||||..|+-+|..|++.|.+|+++++.
T Consensus 287 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~ 318 (598)
T 2x8g_A 287 GKTLVIGASYVALECAGFLASLGGDVTVMVRS 318 (598)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred CEEEEECCCHHHHHHHHHHHHcCCEEEEEECC
Confidence 47999999999999999999999999999986
No 277
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=98.07 E-value=1.7e-05 Score=65.15 Aligned_cols=51 Identities=16% Similarity=0.167 Sum_probs=36.4
Q ss_pred HHHHHHhhhCCCCeEEeCceEEEEEecCCCCCccEEEEeCCCc----EEEccEEEecCCCc
Q 044609 109 SLLEALADELPDDTIQFSSKIAAIDSQTLNGSSAAIINLGDST----IIKAKVLIGCDGVH 165 (232)
Q Consensus 109 ~l~~~l~~~~~~~~i~~~~~v~~i~~~~~~g~~~~~v~~~~g~----~~~a~~vV~A~G~~ 165 (232)
.+.+.|.+. |++++.+++|++++.+. .. ..+...||+ ++.||.||.|+|..
T Consensus 277 ~~~~~L~~~--GV~v~~~~~v~~v~~~~---~~-~~~~~~dg~~~~~~i~ad~viwa~Gv~ 331 (502)
T 4g6h_A 277 YAQSHLENT--SIKVHLRTAVAKVEEKQ---LL-AKTKHEDGKITEETIPYGTLIWATGNK 331 (502)
T ss_dssp HHHHHHHHT--TCEEETTEEEEEECSSE---EE-EEEECTTSCEEEEEEECSEEEECCCEE
T ss_pred HHHHHHHhc--ceeeecCceEEEEeCCc---eE-EEEEecCcccceeeeccCEEEEccCCc
Confidence 344455543 89999999999986442 22 445556764 68999999999964
No 278
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=98.01 E-value=2.5e-05 Score=60.34 Aligned_cols=92 Identities=20% Similarity=0.224 Sum_probs=67.0
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCcEEEEecCCCCcCcceeeeecccHHHHHHHcCChHHHHhhccCceeeEEEEcCCCc
Q 044609 6 EDVVIIGAGIAGLATAVALRRLGIKALVLEKSDGLRATGAALTLSPNAWLALDALGVSHKLTSVYAPAKRVFVTNLGTGA 85 (232)
Q Consensus 6 ~dV~IvG~G~~G~~~A~~L~~~g~~v~viE~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 85 (232)
.+|+|||+|..|+-+|..|++.+.+|+++++.+.+... +
T Consensus 155 ~~v~vvG~g~~~~e~a~~l~~~~~~v~~~~~~~~~~~~--------------------~--------------------- 193 (332)
T 3lzw_A 155 RRVAILGGGDSAVDWALMLEPIAKEVSIIHRRDKFRAH--------------------E--------------------- 193 (332)
T ss_dssp CEEEEECSSHHHHHHHHHHTTTBSEEEEECSSSSCSSC--------------------H---------------------
T ss_pred CEEEEECCCHhHHHHHHHHHhhCCeEEEEEecCcCCcc--------------------H---------------------
Confidence 57999999999999999999999999999987543110 0
Q ss_pred eeEEeccCCCCCCCCceeeeehHHHHHHHhhhCCCCeEEeCceEEEEEecCCCCCccEEEEeCC-----CcEEEccEEEe
Q 044609 86 TQELSYAGKSGRIGSGLRSVHRQSLLEALADELPDDTIQFSSKIAAIDSQTLNGSSAAIINLGD-----STIIKAKVLIG 160 (232)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~i~~~~~v~~i~~~~~~g~~~~~v~~~~-----g~~~~a~~vV~ 160 (232)
...+.|.+ .+++++.+++|.++..++ + . ..|.+.+ +.++.+|.||.
T Consensus 194 -----------------------~~~~~l~~--~gv~~~~~~~v~~i~~~~--~-~-~~v~~~~~~~g~~~~~~~D~vv~ 244 (332)
T 3lzw_A 194 -----------------------HSVENLHA--SKVNVLTPFVPAELIGED--K-I-EQLVLEEVKGDRKEILEIDDLIV 244 (332)
T ss_dssp -----------------------HHHHHHHH--SSCEEETTEEEEEEECSS--S-C-CEEEEEETTSCCEEEEECSEEEE
T ss_pred -----------------------HHHHHHhc--CCeEEEeCceeeEEecCC--c-e-EEEEEEecCCCceEEEECCEEEE
Confidence 00112332 288999999999998754 2 2 4444443 34789999999
Q ss_pred cCCCchh
Q 044609 161 CDGVHSM 167 (232)
Q Consensus 161 A~G~~S~ 167 (232)
|.|....
T Consensus 245 a~G~~p~ 251 (332)
T 3lzw_A 245 NYGFVSS 251 (332)
T ss_dssp CCCEECC
T ss_pred eeccCCC
Confidence 9998653
No 279
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=97.99 E-value=4e-05 Score=65.56 Aligned_cols=97 Identities=8% Similarity=0.065 Sum_probs=69.9
Q ss_pred ccEEEEC--CCHHHHHHHHHHHhCCCcEEEEecCCCCcCcceeeeecccHHHHHHHcCChHHHHhhccCceeeEEEEcCC
Q 044609 6 EDVVIIG--AGIAGLATAVALRRLGIKALVLEKSDGLRATGAALTLSPNAWLALDALGVSHKLTSVYAPAKRVFVTNLGT 83 (232)
Q Consensus 6 ~dV~IvG--~G~~G~~~A~~L~~~g~~v~viE~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~ 83 (232)
.+|+||| +|..|+-+|..|++.|.+|+++++.+...... .
T Consensus 524 ~~VvViG~ggG~~g~e~A~~L~~~g~~Vtlv~~~~~l~~~~-------------------------------------~- 565 (690)
T 3k30_A 524 KKVVVYDDDHYYLGGVVAELLAQKGYEVSIVTPGAQVSSWT-------------------------------------N- 565 (690)
T ss_dssp SEEEEEECSCSSHHHHHHHHHHHTTCEEEEEESSSSTTGGG-------------------------------------G-
T ss_pred CEEEEEcCCCCccHHHHHHHHHhCCCeeEEEeccccccccc-------------------------------------c-
Confidence 4699999 99999999999999999999999876431100 0
Q ss_pred CceeEEeccCCCCCCCCceeeeehHHHHHHHhhhCCCCeEEeCceEEEEEecCCCCCccEEEEe---CCCcEEEccEEEe
Q 044609 84 GATQELSYAGKSGRIGSGLRSVHRQSLLEALADELPDDTIQFSSKIAAIDSQTLNGSSAAIINL---GDSTIIKAKVLIG 160 (232)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~i~~~~~v~~i~~~~~~g~~~~~v~~---~~g~~~~a~~vV~ 160 (232)
. ......+.+.|.+. +++++.+++|+++..+. ..+.. .+++++.||.||.
T Consensus 566 ---------------~----~~~~~~l~~~l~~~--GV~i~~~~~V~~i~~~~------~~v~~~~~~~~~~i~aD~VV~ 618 (690)
T 3k30_A 566 ---------------N----TFEVNRIQRRLIEN--GVARVTDHAVVAVGAGG------VTVRDTYASIERELECDAVVM 618 (690)
T ss_dssp ---------------G----GTCHHHHHHHHHHT--TCEEEESEEEEEEETTE------EEEEETTTCCEEEEECSEEEE
T ss_pred ---------------c----chhHHHHHHHHHHC--CCEEEcCcEEEEEECCe------EEEEEccCCeEEEEECCEEEE
Confidence 0 00133455555553 89999999999997542 33432 2456899999999
Q ss_pred cCCCchh
Q 044609 161 CDGVHSM 167 (232)
Q Consensus 161 A~G~~S~ 167 (232)
|+|..+.
T Consensus 619 A~G~~p~ 625 (690)
T 3k30_A 619 VTARLPR 625 (690)
T ss_dssp ESCEEEC
T ss_pred CCCCCCC
Confidence 9998653
No 280
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=97.98 E-value=2.4e-05 Score=63.43 Aligned_cols=34 Identities=15% Similarity=0.170 Sum_probs=31.2
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCc-EEEEecCCC
Q 044609 6 EDVVIIGAGIAGLATAVALRRLGIK-ALVLEKSDG 39 (232)
Q Consensus 6 ~dV~IvG~G~~G~~~A~~L~~~g~~-v~viE~~~~ 39 (232)
.+|+|||+|.+|+=+|..|++.+.+ |+++++.+.
T Consensus 213 k~VvVvG~G~sg~e~A~~l~~~~~~~V~l~~r~~~ 247 (447)
T 2gv8_A 213 ESVLVVGGASSANDLVRHLTPVAKHPIYQSLLGGG 247 (447)
T ss_dssp CCEEEECSSHHHHHHHHHHTTTSCSSEEEECTTCC
T ss_pred CEEEEEccCcCHHHHHHHHHHHhCCcEEEEeCCCC
Confidence 5799999999999999999999999 999998653
No 281
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=97.95 E-value=6.6e-05 Score=57.00 Aligned_cols=85 Identities=15% Similarity=0.126 Sum_probs=64.1
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCcEEEEecCCCCcCcceeeeecccHHHHHHHcCChHHHHhhccCceeeEEEEcCCCc
Q 044609 6 EDVVIIGAGIAGLATAVALRRLGIKALVLEKSDGLRATGAALTLSPNAWLALDALGVSHKLTSVYAPAKRVFVTNLGTGA 85 (232)
Q Consensus 6 ~dV~IvG~G~~G~~~A~~L~~~g~~v~viE~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 85 (232)
.+|+|||+|++|+-+|..|++.| +|+++++.+.. +
T Consensus 142 ~~v~vvG~G~~~~e~a~~l~~~g-~v~~v~~~~~~---------------------~----------------------- 176 (297)
T 3fbs_A 142 GKIGVIAASPMAIHHALMLPDWG-ETTFFTNGIVE---------------------P----------------------- 176 (297)
T ss_dssp CEEEEECCSTTHHHHHHHGGGTS-EEEEECTTTCC---------------------C-----------------------
T ss_pred CEEEEEecCccHHHHHHHhhhcC-cEEEEECCCCC---------------------C-----------------------
Confidence 58999999999999999999999 99999865420 0
Q ss_pred eeEEeccCCCCCCCCceeeeehHHHHHHHhhhCCCCeEEeCceEEEEEecCCCCCccEEEEeCCCcEEEccEEEecCCCc
Q 044609 86 TQELSYAGKSGRIGSGLRSVHRQSLLEALADELPDDTIQFSSKIAAIDSQTLNGSSAAIINLGDSTIIKAKVLIGCDGVH 165 (232)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~i~~~~~v~~i~~~~~~g~~~~~v~~~~g~~~~a~~vV~A~G~~ 165 (232)
...+.+.|.+. +++++. ++|.++..+ + .|.+.+|+++.+|.||.|+|..
T Consensus 177 ---------------------~~~~~~~l~~~--gv~i~~-~~v~~i~~~---~----~v~~~~g~~~~~D~vi~a~G~~ 225 (297)
T 3fbs_A 177 ---------------------DADQHALLAAR--GVRVET-TRIREIAGH---A----DVVLADGRSIALAGLFTQPKLR 225 (297)
T ss_dssp ---------------------CHHHHHHHHHT--TCEEEC-SCEEEEETT---E----EEEETTSCEEEESEEEECCEEE
T ss_pred ---------------------CHHHHHHHHHC--CcEEEc-ceeeeeecC---C----eEEeCCCCEEEEEEEEEccCcc
Confidence 01123344433 788875 888888643 1 4667899999999999999986
Q ss_pred h
Q 044609 166 S 166 (232)
Q Consensus 166 S 166 (232)
.
T Consensus 226 p 226 (297)
T 3fbs_A 226 I 226 (297)
T ss_dssp C
T ss_pred c
Confidence 4
No 282
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=97.94 E-value=9.9e-05 Score=61.00 Aligned_cols=94 Identities=16% Similarity=0.236 Sum_probs=67.8
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCcEEEEecCCCCcCcceeeeecccHHHHHHHcCChHHHHhhccCceeeEEEEcCCCc
Q 044609 6 EDVVIIGAGIAGLATAVALRRLGIKALVLEKSDGLRATGAALTLSPNAWLALDALGVSHKLTSVYAPAKRVFVTNLGTGA 85 (232)
Q Consensus 6 ~dV~IvG~G~~G~~~A~~L~~~g~~v~viE~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 85 (232)
.+|+|||+|.+|+-+|..|++.|.+|+++++.+....
T Consensus 356 k~V~ViGgG~~g~E~A~~L~~~g~~Vtlv~~~~~l~~------------------------------------------- 392 (521)
T 1hyu_A 356 KRVAVIGGGNSGVEAAIDLAGIVEHVTLLEFAPEMKA------------------------------------------- 392 (521)
T ss_dssp SEEEEECCSHHHHHHHHHHHHHBSEEEEECSSSSCCS-------------------------------------------
T ss_pred CeEEEECCCHHHHHHHHHHHhhCCEEEEEEeCcccCc-------------------------------------------
Confidence 5899999999999999999999999999998654210
Q ss_pred eeEEeccCCCCCCCCceeeeehHHHHHHHhhhCCCCeEEeCceEEEEEecCCCCCccEEEEeC---CCc--EEEccEEEe
Q 044609 86 TQELSYAGKSGRIGSGLRSVHRQSLLEALADELPDDTIQFSSKIAAIDSQTLNGSSAAIINLG---DST--IIKAKVLIG 160 (232)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~i~~~~~v~~i~~~~~~g~~~~~v~~~---~g~--~~~a~~vV~ 160 (232)
. ..+.+.|.+ .++++++.+++++++..++ +.. ..+.+. +|+ ++.+|.||.
T Consensus 393 -------------~--------~~l~~~l~~-~~gV~v~~~~~v~~i~~~~--~~v-~~v~~~~~~~g~~~~i~~D~vi~ 447 (521)
T 1hyu_A 393 -------------D--------QVLQDKVRS-LKNVDIILNAQTTEVKGDG--SKV-VGLEYRDRVSGDIHSVALAGIFV 447 (521)
T ss_dssp -------------C--------HHHHHHHTT-CTTEEEECSEEEEEEEECS--SSE-EEEEEEETTTCCEEEEECSEEEE
T ss_pred -------------C--------HHHHHHHhc-CCCcEEEeCCEEEEEEcCC--CcE-EEEEEEeCCCCceEEEEcCEEEE
Confidence 0 012233332 2478999999999998653 332 344443 353 689999999
Q ss_pred cCCCchh
Q 044609 161 CDGVHSM 167 (232)
Q Consensus 161 A~G~~S~ 167 (232)
|.|...+
T Consensus 448 a~G~~pn 454 (521)
T 1hyu_A 448 QIGLLPN 454 (521)
T ss_dssp CCCEEES
T ss_pred CcCCCCC
Confidence 9997643
No 283
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=97.83 E-value=2.2e-05 Score=65.27 Aligned_cols=35 Identities=20% Similarity=0.398 Sum_probs=32.7
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCcEEEEecCCCC
Q 044609 6 EDVVIIGAGIAGLATAVALRRLGIKALVLEKSDGL 40 (232)
Q Consensus 6 ~dV~IvG~G~~G~~~A~~L~~~g~~v~viE~~~~~ 40 (232)
.+|+|||+|.+|+-+|..|++.+.+|++++|.+..
T Consensus 192 krV~VIG~G~sgve~a~~l~~~~~~Vtv~~r~~~~ 226 (549)
T 4ap3_A 192 KRVGVIGTGSSGIQSIPIIAEQAEQLFVFQRSANY 226 (549)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHBSEEEEEESSCCC
T ss_pred CEEEEECCCchHHHHHHHHHhhCCEEEEEECCCCc
Confidence 58999999999999999999999999999998863
No 284
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=97.82 E-value=0.0001 Score=60.06 Aligned_cols=34 Identities=15% Similarity=0.248 Sum_probs=31.6
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCcEEEEecCCC
Q 044609 6 EDVVIIGAGIAGLATAVALRRLGIKALVLEKSDG 39 (232)
Q Consensus 6 ~dV~IvG~G~~G~~~A~~L~~~g~~v~viE~~~~ 39 (232)
.+|+|||+|.+|+-+|..|++.|.+|+++++.+.
T Consensus 198 k~VvVVG~G~sg~eiA~~l~~~g~~V~li~~~~~ 231 (464)
T 2xve_A 198 KTVLLVGSSYSAEDIGSQCYKYGAKKLISCYRTA 231 (464)
T ss_dssp SEEEEECCSTTHHHHHHHHHHTTCSEEEEECSSC
T ss_pred CEEEEEcCCCCHHHHHHHHHHhCCeEEEEEECCC
Confidence 5799999999999999999999999999998754
No 285
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=97.74 E-value=0.00028 Score=54.06 Aligned_cols=34 Identities=26% Similarity=0.583 Sum_probs=31.3
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCcEEEEecCCC
Q 044609 6 EDVVIIGAGIAGLATAVALRRLGIKALVLEKSDG 39 (232)
Q Consensus 6 ~dV~IvG~G~~G~~~A~~L~~~g~~v~viE~~~~ 39 (232)
.+|+|||+|..|+-+|..|++.|.+|+++++...
T Consensus 153 ~~vvViGgG~ig~e~A~~l~~~G~~Vt~v~~~~~ 186 (314)
T 4a5l_A 153 KVLMVVGGGDAAMEEALHLTKYGSKVIILHRRDA 186 (314)
T ss_dssp SEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSS
T ss_pred CeEEEECCChHHHHHHHHHHHhCCeeeeeccccc
Confidence 5799999999999999999999999999997653
No 286
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=97.68 E-value=0.0001 Score=63.44 Aligned_cols=33 Identities=18% Similarity=0.201 Sum_probs=31.0
Q ss_pred ccEEEEC--CCHHHHHHHHHHHhCCCcEEEEecCC
Q 044609 6 EDVVIIG--AGIAGLATAVALRRLGIKALVLEKSD 38 (232)
Q Consensus 6 ~dV~IvG--~G~~G~~~A~~L~~~g~~v~viE~~~ 38 (232)
.+|+||| ||..|+-+|..|++.|.+|+++++.+
T Consensus 529 k~VvVIG~GgG~~g~e~A~~l~~~G~~Vtlv~~~~ 563 (729)
T 1o94_A 529 KRVVILNADTYFMAPSLAEKLATAGHEVTIVSGVH 563 (729)
T ss_dssp SEEEEEECCCSSHHHHHHHHHHHTTCEEEEEESSC
T ss_pred CeEEEEcCCCCchHHHHHHHHHHcCCEEEEEeccc
Confidence 4899999 99999999999999999999999876
No 287
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=97.66 E-value=0.00014 Score=64.53 Aligned_cols=91 Identities=11% Similarity=0.140 Sum_probs=66.5
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCcEEEEecCCCCcCcceeeeecccHHHHHHHcCChHHHHhhccCceeeEEEEcCCCc
Q 044609 6 EDVVIIGAGIAGLATAVALRRLGIKALVLEKSDGLRATGAALTLSPNAWLALDALGVSHKLTSVYAPAKRVFVTNLGTGA 85 (232)
Q Consensus 6 ~dV~IvG~G~~G~~~A~~L~~~g~~v~viE~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 85 (232)
.+|+|||+|+.|+-+|..|++.|.+|+|+|+.+.+. .
T Consensus 285 k~vvViGgG~~g~E~A~~L~~~G~~Vtvv~~~~~~~----------------------~--------------------- 321 (965)
T 2gag_A 285 ARIAVATTNDSAYELVRELAATGGVVAVIDARSSIS----------------------A--------------------- 321 (965)
T ss_dssp SSEEEEESSTTHHHHHHHHGGGTCCSEEEESCSSCC----------------------H---------------------
T ss_pred CeEEEEcCCHHHHHHHHHHHHcCCcEEEEECCCccc----------------------h---------------------
Confidence 579999999999999999999999999999865330 0
Q ss_pred eeEEeccCCCCCCCCceeeeehHHHHHHHhhhCCCCeEEeCceEEEEEecCCCCCccEEEEeCC-------C--cEEEcc
Q 044609 86 TQELSYAGKSGRIGSGLRSVHRQSLLEALADELPDDTIQFSSKIAAIDSQTLNGSSAAIINLGD-------S--TIIKAK 156 (232)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~i~~~~~v~~i~~~~~~g~~~~~v~~~~-------g--~~~~a~ 156 (232)
. .+.|.+ .+++++.++.|+++..+++ +.. ..|.+.+ | +++.||
T Consensus 322 -------------~-----------~~~l~~--~GV~v~~~~~v~~i~~~~~-~~v-~~v~~~~~~~~~~~G~~~~i~~D 373 (965)
T 2gag_A 322 -------------A-----------AAQAVA--DGVQVISGSVVVDTEADEN-GEL-SAIVVAELDEARELGGTQRFEAD 373 (965)
T ss_dssp -------------H-----------HHHHHH--TTCCEEETEEEEEEEECTT-SCE-EEEEEEEECTTCCEEEEEEEECS
T ss_pred -------------h-----------HHHHHh--CCeEEEeCCEeEEEeccCC-CCE-EEEEEEeccccCCCCceEEEEcC
Confidence 0 122333 2889999999999986311 332 2344432 4 579999
Q ss_pred EEEecCCCchh
Q 044609 157 VLIGCDGVHSM 167 (232)
Q Consensus 157 ~vV~A~G~~S~ 167 (232)
.||.|.|....
T Consensus 374 ~Vv~a~G~~P~ 384 (965)
T 2gag_A 374 VLAVAGGFNPV 384 (965)
T ss_dssp EEEEECCEEEC
T ss_pred EEEECCCcCcC
Confidence 99999998654
No 288
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=97.62 E-value=0.0003 Score=57.17 Aligned_cols=35 Identities=23% Similarity=0.373 Sum_probs=30.8
Q ss_pred ccEEEECCCHHHHHHHHHHH--------------------hCCC-cEEEEecCCCC
Q 044609 6 EDVVIIGAGIAGLATAVALR--------------------RLGI-KALVLEKSDGL 40 (232)
Q Consensus 6 ~dV~IvG~G~~G~~~A~~L~--------------------~~g~-~v~viE~~~~~ 40 (232)
.+|+|||+|..|+-+|..|+ +.|. +|+|++|....
T Consensus 146 ~~vvVIGgG~~g~e~A~~L~~~~~~l~~tdi~~~a~~~l~~~g~~~V~lv~r~~~~ 201 (460)
T 1cjc_A 146 DTAVILGQGNVALDVARILLTPPDHLEKTDITEAALGALRQSRVKTVWIVGRRGPL 201 (460)
T ss_dssp SEEEEESCSHHHHHHHHHHHSCGGGGTTSCCCHHHHHHHHTCCCCEEEEECSSCGG
T ss_pred CEEEEECCCHHHHHHHHHHhhchhhhccccccHHHHHHHhhCCCcEEEEEEcCChH
Confidence 58999999999999999999 5687 69999987654
No 289
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=97.55 E-value=0.00014 Score=49.73 Aligned_cols=34 Identities=18% Similarity=0.365 Sum_probs=31.5
Q ss_pred cccEEEECCCHHHHHHHHHHHhCCCcEEEEecCC
Q 044609 5 EEDVVIIGAGIAGLATAVALRRLGIKALVLEKSD 38 (232)
Q Consensus 5 ~~dV~IvG~G~~G~~~A~~L~~~g~~v~viE~~~ 38 (232)
+..|+|+|+|..|..+|..|.+.|++|+++|+++
T Consensus 3 ~~~vlI~G~G~vG~~la~~L~~~g~~V~vid~~~ 36 (153)
T 1id1_A 3 KDHFIVCGHSILAINTILQLNQRGQNVTVISNLP 36 (153)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCCEEEEECCC
Confidence 4579999999999999999999999999999964
No 290
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=97.55 E-value=9.7e-05 Score=49.78 Aligned_cols=33 Identities=30% Similarity=0.482 Sum_probs=31.0
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCcEEEEecCC
Q 044609 6 EDVVIIGAGIAGLATAVALRRLGIKALVLEKSD 38 (232)
Q Consensus 6 ~dV~IvG~G~~G~~~A~~L~~~g~~v~viE~~~ 38 (232)
..|+|+|+|..|..+|..|.++|++|+++|+++
T Consensus 7 ~~v~I~G~G~iG~~la~~L~~~g~~V~~id~~~ 39 (141)
T 3llv_A 7 YEYIVIGSEAAGVGLVRELTAAGKKVLAVDKSK 39 (141)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCeEEEEECCH
Confidence 479999999999999999999999999999864
No 291
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=97.54 E-value=7.9e-05 Score=59.17 Aligned_cols=36 Identities=28% Similarity=0.238 Sum_probs=33.3
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCcEEEEecCCCCc
Q 044609 6 EDVVIIGAGIAGLATAVALRRLGIKALVLEKSDGLR 41 (232)
Q Consensus 6 ~dV~IvG~G~~G~~~A~~L~~~g~~v~viE~~~~~~ 41 (232)
.+|+|||+|..|+-+|..|++.|.+|+++|+.+.+-
T Consensus 147 ~~vvVIGgG~~g~E~A~~l~~~g~~Vtvv~~~~~~l 182 (385)
T 3klj_A 147 GKAFIIGGGILGIELAQAIIDSGTPASIGIILEYPL 182 (385)
T ss_dssp SCEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSSC
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCeEEEEEcCCccc
Confidence 589999999999999999999999999999988653
No 292
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=97.53 E-value=0.00012 Score=49.26 Aligned_cols=35 Identities=23% Similarity=0.277 Sum_probs=32.2
Q ss_pred cccEEEECCCHHHHHHHHHHHhCCCcEEEEecCCC
Q 044609 5 EEDVVIIGAGIAGLATAVALRRLGIKALVLEKSDG 39 (232)
Q Consensus 5 ~~dV~IvG~G~~G~~~A~~L~~~g~~v~viE~~~~ 39 (232)
+-.|+|+|+|..|..+|..|.+.|++|+++|+++.
T Consensus 7 ~~~viIiG~G~~G~~la~~L~~~g~~v~vid~~~~ 41 (140)
T 3fwz_A 7 CNHALLVGYGRVGSLLGEKLLASDIPLVVIETSRT 41 (140)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTTCCEEEEESCHH
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCHH
Confidence 35799999999999999999999999999999764
No 293
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=97.50 E-value=0.00015 Score=49.79 Aligned_cols=34 Identities=26% Similarity=0.346 Sum_probs=31.6
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCcEEEEecCCC
Q 044609 6 EDVVIIGAGIAGLATAVALRRLGIKALVLEKSDG 39 (232)
Q Consensus 6 ~dV~IvG~G~~G~~~A~~L~~~g~~v~viE~~~~ 39 (232)
..|+|+|+|..|..+|..|.+.|.+|+++|+++.
T Consensus 20 ~~v~IiG~G~iG~~la~~L~~~g~~V~vid~~~~ 53 (155)
T 2g1u_A 20 KYIVIFGCGRLGSLIANLASSSGHSVVVVDKNEY 53 (155)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCGG
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCeEEEEECCHH
Confidence 5899999999999999999999999999998754
No 294
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=97.46 E-value=0.00036 Score=56.64 Aligned_cols=35 Identities=29% Similarity=0.427 Sum_probs=30.1
Q ss_pred ccEEEECCCHHHHHHHHHHHhC--------------------CC-cEEEEecCCCC
Q 044609 6 EDVVIIGAGIAGLATAVALRRL--------------------GI-KALVLEKSDGL 40 (232)
Q Consensus 6 ~dV~IvG~G~~G~~~A~~L~~~--------------------g~-~v~viE~~~~~ 40 (232)
.+|+|||+|.+|+-+|..|++. |. +|+|+++....
T Consensus 148 ~~vvVIG~G~~g~e~A~~L~~~~~~l~~tdi~~~~~~~l~~~g~~~V~lv~r~~~~ 203 (456)
T 1lqt_A 148 ARAVVIGNGNVALDVARILLTDPDVLARTDIADHALESLRPRGIQEVVIVGRRGPL 203 (456)
T ss_dssp SEEEEECCSHHHHHHHHHHHSCHHHHTTSCCCHHHHHHHTTCCCCEEEEECSSCGG
T ss_pred CEEEEECCCHHHHHHHHHHHhhhhhhcCCCccHHHHHHHHHCCCcEEEEEecCChh
Confidence 5799999999999999999974 54 89999987644
No 295
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=97.46 E-value=0.00059 Score=58.17 Aligned_cols=50 Identities=10% Similarity=0.108 Sum_probs=36.2
Q ss_pred HHHHHHhhhCCCCeEEeCceEEEEEecCCCCCccEEEEeCCC--cEEEccEEEecCCCchh
Q 044609 109 SLLEALADELPDDTIQFSSKIAAIDSQTLNGSSAAIINLGDS--TIIKAKVLIGCDGVHSM 167 (232)
Q Consensus 109 ~l~~~l~~~~~~~~i~~~~~v~~i~~~~~~g~~~~~v~~~~g--~~~~a~~vV~A~G~~S~ 167 (232)
.+.+.|.+. +++++.+++|+++..+ . +.+. .+| +++.+|.||.|.|....
T Consensus 578 ~~~~~l~~~--GV~v~~~~~v~~i~~~-----~-v~~~-~~G~~~~i~~D~Vi~a~G~~p~ 629 (671)
T 1ps9_A 578 IHRTTLLSR--GVKMIPGVSYQKIDDD-----G-LHVV-INGETQVLAVDNVVICAGQEPN 629 (671)
T ss_dssp HHHHHHHHT--TCEEECSCEEEEEETT-----E-EEEE-ETTEEEEECCSEEEECCCEEEC
T ss_pred HHHHHHHhc--CCEEEeCcEEEEEeCC-----e-EEEe-cCCeEEEEeCCEEEECCCcccc
Confidence 344455543 8999999999998632 2 4444 566 57999999999998753
No 296
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=97.44 E-value=0.0002 Score=47.97 Aligned_cols=33 Identities=21% Similarity=0.371 Sum_probs=30.7
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCcEEEEecCC
Q 044609 6 EDVVIIGAGIAGLATAVALRRLGIKALVLEKSD 38 (232)
Q Consensus 6 ~dV~IvG~G~~G~~~A~~L~~~g~~v~viE~~~ 38 (232)
.+|+|+|+|..|..+|..|.+.|++|+++|+++
T Consensus 5 m~i~IiG~G~iG~~~a~~L~~~g~~v~~~d~~~ 37 (140)
T 1lss_A 5 MYIIIAGIGRVGYTLAKSLSEKGHDIVLIDIDK 37 (140)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 479999999999999999999999999999864
No 297
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=97.41 E-value=0.00021 Score=46.23 Aligned_cols=35 Identities=20% Similarity=0.305 Sum_probs=31.4
Q ss_pred ccccEEEECCCHHHHHHHHHHHhCC-CcEEEEecCC
Q 044609 4 VEEDVVIIGAGIAGLATAVALRRLG-IKALVLEKSD 38 (232)
Q Consensus 4 ~~~dV~IvG~G~~G~~~A~~L~~~g-~~v~viE~~~ 38 (232)
+...|+|+|+|..|..++..|.+.| .+|+++++++
T Consensus 4 ~~~~v~I~G~G~iG~~~~~~l~~~g~~~v~~~~r~~ 39 (118)
T 3ic5_A 4 MRWNICVVGAGKIGQMIAALLKTSSNYSVTVADHDL 39 (118)
T ss_dssp TCEEEEEECCSHHHHHHHHHHHHCSSEEEEEEESCH
T ss_pred CcCeEEEECCCHHHHHHHHHHHhCCCceEEEEeCCH
Confidence 3357999999999999999999999 8999999864
No 298
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=97.38 E-value=0.00023 Score=47.88 Aligned_cols=33 Identities=24% Similarity=0.463 Sum_probs=30.6
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCcEEEEecCC
Q 044609 6 EDVVIIGAGIAGLATAVALRRLGIKALVLEKSD 38 (232)
Q Consensus 6 ~dV~IvG~G~~G~~~A~~L~~~g~~v~viE~~~ 38 (232)
..|+|+|+|..|..+|..|.+.|++|+++|+++
T Consensus 7 ~~v~I~G~G~iG~~~a~~l~~~g~~v~~~d~~~ 39 (144)
T 2hmt_A 7 KQFAVIGLGRFGGSIVKELHRMGHEVLAVDINE 39 (144)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCCEEEESCH
T ss_pred CcEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 469999999999999999999999999999864
No 299
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=97.34 E-value=0.0018 Score=57.87 Aligned_cols=33 Identities=21% Similarity=0.424 Sum_probs=30.5
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCC-cEEEEecCC
Q 044609 6 EDVVIIGAGIAGLATAVALRRLGI-KALVLEKSD 38 (232)
Q Consensus 6 ~dV~IvG~G~~G~~~A~~L~~~g~-~v~viE~~~ 38 (232)
.+|+|||||..|+-+|..|++.|. +|+++++.+
T Consensus 333 ~~VvVIGgG~~g~e~A~~~~~~G~~~Vtvv~r~~ 366 (1025)
T 1gte_A 333 GAVIVLGAGDTAFDCATSALRCGARRVFLVFRKG 366 (1025)
T ss_dssp SEEEEECSSHHHHHHHHHHHHTTCSEEEEECSSC
T ss_pred CcEEEECCChHHHHHHHHHHHcCCCEEEEEEecC
Confidence 489999999999999999999996 899999875
No 300
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=97.32 E-value=0.00025 Score=55.56 Aligned_cols=38 Identities=34% Similarity=0.432 Sum_probs=32.7
Q ss_pred CCcccccEEEECCCHHHHHHHHHHHhCCCcEEEEecCC
Q 044609 1 MEMVEEDVVIIGAGIAGLATAVALRRLGIKALVLEKSD 38 (232)
Q Consensus 1 m~~~~~dV~IvG~G~~G~~~A~~L~~~g~~v~viE~~~ 38 (232)
|+++..+|.|||+|..|.++|..|++.|++|.++++++
T Consensus 25 m~~~~mkI~VIGaG~mG~alA~~La~~G~~V~l~~r~~ 62 (356)
T 3k96_A 25 MEPFKHPIAILGAGSWGTALALVLARKGQKVRLWSYES 62 (356)
T ss_dssp --CCCSCEEEECCSHHHHHHHHHHHTTTCCEEEECSCH
T ss_pred ccccCCeEEEECccHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 45445689999999999999999999999999999864
No 301
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=97.31 E-value=0.0004 Score=54.00 Aligned_cols=32 Identities=19% Similarity=0.345 Sum_probs=29.4
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCcEEEEecCC
Q 044609 6 EDVVIIGAGIAGLATAVALRRLGIKALVLEKSD 38 (232)
Q Consensus 6 ~dV~IvG~G~~G~~~A~~L~~~g~~v~viE~~~ 38 (232)
.+|+|||+|.+|+-+|..|++.+ +|+++.+..
T Consensus 164 ~~v~VvG~G~~g~e~a~~l~~~~-~v~~v~~~~ 195 (357)
T 4a9w_A 164 MRVAIIGGGNSGAQILAEVSTVA-ETTWITQHE 195 (357)
T ss_dssp SEEEEECCSHHHHHHHHHHTTTS-EEEEECSSC
T ss_pred CEEEEECCCcCHHHHHHHHHhhC-CEEEEECCC
Confidence 58999999999999999999998 799999874
No 302
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=97.30 E-value=0.00022 Score=54.86 Aligned_cols=34 Identities=24% Similarity=0.434 Sum_probs=31.5
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCcEEEEecCCC
Q 044609 6 EDVVIIGAGIAGLATAVALRRLGIKALVLEKSDG 39 (232)
Q Consensus 6 ~dV~IvG~G~~G~~~A~~L~~~g~~v~viE~~~~ 39 (232)
.+|.|||+|..|...|..+++.|++|+++|..+.
T Consensus 7 ~~VaViGaG~MG~giA~~~a~~G~~V~l~D~~~~ 40 (319)
T 3ado_A 7 GDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEPR 40 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCHH
T ss_pred CeEEEECCcHHHHHHHHHHHhCCCeEEEEECCHH
Confidence 5799999999999999999999999999998653
No 303
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=97.29 E-value=0.001 Score=53.60 Aligned_cols=49 Identities=10% Similarity=0.135 Sum_probs=34.0
Q ss_pred HHHHHHHhhhCCCCeEEeCceEEEEEecCCCCCccEEEEe--CC-----CcEEEccEEEecCCC
Q 044609 108 QSLLEALADELPDDTIQFSSKIAAIDSQTLNGSSAAIINL--GD-----STIIKAKVLIGCDGV 164 (232)
Q Consensus 108 ~~l~~~l~~~~~~~~i~~~~~v~~i~~~~~~g~~~~~v~~--~~-----g~~~~a~~vV~A~G~ 164 (232)
..+.+.|.+. +++++.+++|++++.+ . +.+.. .+ +.++.+|.|+.|.|.
T Consensus 212 ~~~~~~l~~~--gI~~~~~~~v~~v~~~----~--v~~~~~~~~g~~~~~~~i~~D~vv~~~g~ 267 (437)
T 3sx6_A 212 GILTKGLKEE--GIEAYTNCKVTKVEDN----K--MYVTQVDEKGETIKEMVLPVKFGMMIPAF 267 (437)
T ss_dssp HHHHHHHHHT--TCEEECSEEEEEEETT----E--EEEEEECTTSCEEEEEEEECSEEEEECCE
T ss_pred HHHHHHHHHC--CCEEEcCCEEEEEECC----e--EEEEecccCCccccceEEEEeEEEEcCCC
Confidence 3445555554 8999999999998643 2 33332 34 457899999999884
No 304
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=97.28 E-value=0.00034 Score=53.80 Aligned_cols=38 Identities=26% Similarity=0.495 Sum_probs=34.0
Q ss_pred CCcccccEEEECCCHHHHHHHHHHHhCCC-cEEEEecCC
Q 044609 1 MEMVEEDVVIIGAGIAGLATAVALRRLGI-KALVLEKSD 38 (232)
Q Consensus 1 m~~~~~dV~IvG~G~~G~~~A~~L~~~g~-~v~viE~~~ 38 (232)
|.|...+|.|||+|..|.++|..|+..|+ +++++|+.+
T Consensus 4 m~~~~~kv~ViGaG~vG~~ia~~l~~~g~~~v~l~D~~~ 42 (315)
T 3tl2_A 4 MTIKRKKVSVIGAGFTGATTAFLLAQKELADVVLVDIPQ 42 (315)
T ss_dssp CCCCCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCGG
T ss_pred cccCCCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeccc
Confidence 65555789999999999999999999999 999999873
No 305
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=97.27 E-value=0.00036 Score=53.44 Aligned_cols=34 Identities=21% Similarity=0.481 Sum_probs=31.3
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCcEEEEecCCC
Q 044609 6 EDVVIIGAGIAGLATAVALRRLGIKALVLEKSDG 39 (232)
Q Consensus 6 ~dV~IvG~G~~G~~~A~~L~~~g~~v~viE~~~~ 39 (232)
..|.|||+|..|..+|..|++.|++|+++|+++.
T Consensus 16 ~~I~VIG~G~mG~~iA~~la~~G~~V~~~d~~~~ 49 (302)
T 1f0y_A 16 KHVTVIGGGLMGAGIAQVAAATGHTVVLVDQTED 49 (302)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEECCHH
Confidence 4699999999999999999999999999998753
No 306
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=97.25 E-value=0.00033 Score=53.99 Aligned_cols=34 Identities=24% Similarity=0.434 Sum_probs=31.6
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCcEEEEecCCC
Q 044609 6 EDVVIIGAGIAGLATAVALRRLGIKALVLEKSDG 39 (232)
Q Consensus 6 ~dV~IvG~G~~G~~~A~~L~~~g~~v~viE~~~~ 39 (232)
..|.|||+|..|...|..|++.|++|+++|+++.
T Consensus 7 ~kI~vIGaG~MG~~iA~~la~~G~~V~l~d~~~~ 40 (319)
T 2dpo_A 7 GDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEPR 40 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCHH
T ss_pred ceEEEEeeCHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 5799999999999999999999999999998754
No 307
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=97.22 E-value=0.00038 Score=54.04 Aligned_cols=36 Identities=17% Similarity=0.310 Sum_probs=32.3
Q ss_pred ccccEEEECCCHHHHHHHHHHHhCCC-cEEEEecCCC
Q 044609 4 VEEDVVIIGAGIAGLATAVALRRLGI-KALVLEKSDG 39 (232)
Q Consensus 4 ~~~dV~IvG~G~~G~~~A~~L~~~g~-~v~viE~~~~ 39 (232)
+..+|+|||+|..|.++|..|++.|+ +|+++|+++.
T Consensus 8 ~~~kI~VIGaG~vG~~lA~~la~~g~~~V~L~D~~~~ 44 (331)
T 1pzg_A 8 RRKKVAMIGSGMIGGTMGYLCALRELADVVLYDVVKG 44 (331)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSSS
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCeEEEEECChh
Confidence 34589999999999999999999998 9999998764
No 308
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=97.21 E-value=0.00036 Score=53.47 Aligned_cols=35 Identities=20% Similarity=0.422 Sum_probs=32.5
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCcEEEEecCCCC
Q 044609 6 EDVVIIGAGIAGLATAVALRRLGIKALVLEKSDGL 40 (232)
Q Consensus 6 ~dV~IvG~G~~G~~~A~~L~~~g~~v~viE~~~~~ 40 (232)
.+|+|||||..|+-+|..|++.|.+|+|+|+.+..
T Consensus 146 k~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~ 180 (312)
T 4gcm_A 146 KRLFVIGGGDSAVEEGTFLTKFADKVTIVHRRDEL 180 (312)
T ss_dssp CEEEEECCSHHHHHHHHHHTTTCSEEEEECSSSSC
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCEEEEEeccccc
Confidence 58999999999999999999999999999998754
No 309
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=97.19 E-value=0.00045 Score=53.37 Aligned_cols=33 Identities=27% Similarity=0.432 Sum_probs=30.9
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCcEEEEecCC
Q 044609 6 EDVVIIGAGIAGLATAVALRRLGIKALVLEKSD 38 (232)
Q Consensus 6 ~dV~IvG~G~~G~~~A~~L~~~g~~v~viE~~~ 38 (232)
.+|+|||+|..|.++|..|++.|.+|++++|++
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~~ 35 (320)
T 3i83_A 3 LNILVIGTGAIGSFYGALLAKTGHCVSVVSRSD 35 (320)
T ss_dssp CEEEEESCCHHHHHHHHHHHHTTCEEEEECSTT
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCeEEEEeCCh
Confidence 379999999999999999999999999999865
No 310
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=97.15 E-value=0.00052 Score=53.37 Aligned_cols=35 Identities=29% Similarity=0.391 Sum_probs=31.1
Q ss_pred CCcccccEEEECCCHHHHHHHHHHHhCCCcEEEEecC
Q 044609 1 MEMVEEDVVIIGAGIAGLATAVALRRLGIKALVLEKS 37 (232)
Q Consensus 1 m~~~~~dV~IvG~G~~G~~~A~~L~~~g~~v~viE~~ 37 (232)
|++ .+|.|||+|..|.++|..|++.|++|++++|.
T Consensus 1 M~~--mkI~IiGaG~~G~~~a~~L~~~g~~V~~~~r~ 35 (335)
T 3ghy_A 1 MSL--TRICIVGAGAVGGYLGARLALAGEAINVLARG 35 (335)
T ss_dssp -CC--CCEEEESCCHHHHHHHHHHHHTTCCEEEECCH
T ss_pred CCC--CEEEEECcCHHHHHHHHHHHHCCCEEEEEECh
Confidence 543 47999999999999999999999999999985
No 311
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=97.13 E-value=0.00052 Score=56.01 Aligned_cols=39 Identities=26% Similarity=0.377 Sum_probs=32.7
Q ss_pred CCcccccEEEECCCHHHHHHHHHHHhCCCcEEEEecCCC
Q 044609 1 MEMVEEDVVIIGAGIAGLATAVALRRLGIKALVLEKSDG 39 (232)
Q Consensus 1 m~~~~~dV~IvG~G~~G~~~A~~L~~~g~~v~viE~~~~ 39 (232)
|+|...+|.|||+|..|..+|..|++.|++|+++|+++.
T Consensus 1 Msm~~~kVgVIGaG~MG~~IA~~la~aG~~V~l~D~~~e 39 (483)
T 3mog_A 1 MSLNVQTVAVIGSGTMGAGIAEVAASHGHQVLLYDISAE 39 (483)
T ss_dssp ---CCCCEEEECCSHHHHHHHHHHHHTTCCEEEECSCHH
T ss_pred CCCCCCEEEEECcCHHHHHHHHHHHHCCCeEEEEECCHH
Confidence 554446899999999999999999999999999998753
No 312
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=97.12 E-value=0.0016 Score=52.35 Aligned_cols=51 Identities=12% Similarity=0.107 Sum_probs=35.7
Q ss_pred hHHHHHHHhhhCCCCeEEeCceEEEEEecCCCCCccEEEEeCC--CcEEEccEEEecCCCc
Q 044609 107 RQSLLEALADELPDDTIQFSSKIAAIDSQTLNGSSAAIINLGD--STIIKAKVLIGCDGVH 165 (232)
Q Consensus 107 ~~~l~~~l~~~~~~~~i~~~~~v~~i~~~~~~g~~~~~v~~~~--g~~~~a~~vV~A~G~~ 165 (232)
+..+.+.|.+. +++++++++|++++.+ . +.+...+ ++++.+|.||.|.|..
T Consensus 203 ~~~l~~~l~~~--GV~i~~~~~v~~v~~~-----~-v~~~~~~~~g~~i~~D~vv~a~G~~ 255 (430)
T 3h28_A 203 KRLVEDLFAER--NIDWIANVAVKAIEPD-----K-VIYEDLNGNTHEVPAKFTMFMPSFQ 255 (430)
T ss_dssp HHHHHHHHHHT--TCEEECSCEEEEECSS-----E-EEEECTTSCEEEEECSEEEEECEEE
T ss_pred HHHHHHHHHHC--CCEEEeCCEEEEEeCC-----e-EEEEecCCCceEEeeeEEEECCCCc
Confidence 34455555544 8999999999998543 2 4444322 5689999999999865
No 313
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=97.10 E-value=0.0036 Score=49.89 Aligned_cols=47 Identities=15% Similarity=0.047 Sum_probs=35.7
Q ss_pred HHHHHhhhCCCCeEEeCceEEEEEecCCCCCccEEEEeCCCcEEEccEEEecCCCch
Q 044609 110 LLEALADELPDDTIQFSSKIAAIDSQTLNGSSAAIINLGDSTIIKAKVLIGCDGVHS 166 (232)
Q Consensus 110 l~~~l~~~~~~~~i~~~~~v~~i~~~~~~g~~~~~v~~~~g~~~~a~~vV~A~G~~S 166 (232)
+.+.|.+. +++++.+++|+++..+ . |.+.+|+++.+|.||.|.|...
T Consensus 224 ~~~~l~~~--gV~~~~~~~v~~i~~~-----~---v~~~~g~~~~~D~vi~a~G~~~ 270 (409)
T 3h8l_A 224 VASIYNQL--GIKLVHNFKIKEIREH-----E---IVDEKGNTIPADITILLPPYTG 270 (409)
T ss_dssp HHHHHHHH--TCEEECSCCEEEECSS-----E---EEETTSCEEECSEEEEECCEEC
T ss_pred HHHHHHHC--CCEEEcCCceEEECCC-----e---EEECCCCEEeeeEEEECCCCCc
Confidence 33444443 8999999999998532 1 5678899999999999999754
No 314
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=97.10 E-value=0.0063 Score=49.99 Aligned_cols=35 Identities=9% Similarity=0.310 Sum_probs=30.2
Q ss_pred ccEEEECCCHHHHHHHHHHHhC--CCcEEEEecCCCC
Q 044609 6 EDVVIIGAGIAGLATAVALRRL--GIKALVLEKSDGL 40 (232)
Q Consensus 6 ~dV~IvG~G~~G~~~A~~L~~~--g~~v~viE~~~~~ 40 (232)
++|+|||+|.+|.-++..|+++ +.+|+++=|.+..
T Consensus 247 KrV~VVG~G~SA~ei~~~L~~~~~~~~v~~~~R~~~~ 283 (501)
T 4b63_A 247 YNIAVLGSGQSAAEIFHDLQKRYPNSRTTLIMRDSAM 283 (501)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSTTCEEEEECSSSSC
T ss_pred cEEEEECCcHHHHHHHHHHHhcCCCceEEEEeCCCcc
Confidence 4799999999999999999875 6799999887643
No 315
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=97.07 E-value=0.00052 Score=52.80 Aligned_cols=33 Identities=33% Similarity=0.465 Sum_probs=30.4
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCcEEEEecCC
Q 044609 6 EDVVIIGAGIAGLATAVALRRLGIKALVLEKSD 38 (232)
Q Consensus 6 ~dV~IvG~G~~G~~~A~~L~~~g~~v~viE~~~ 38 (232)
.+|.|||+|..|.++|..|++.|.+|++++|+.
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~~ 35 (312)
T 3hn2_A 3 LRIAIVGAGALGLYYGALLQRSGEDVHFLLRRD 35 (312)
T ss_dssp -CEEEECCSTTHHHHHHHHHHTSCCEEEECSTT
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCeEEEEEcCc
Confidence 369999999999999999999999999999864
No 316
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=97.07 E-value=0.0007 Score=47.68 Aligned_cols=33 Identities=30% Similarity=0.409 Sum_probs=30.8
Q ss_pred ccEEEECCCHHHHHHHHHHHhC-CCcEEEEecCC
Q 044609 6 EDVVIIGAGIAGLATAVALRRL-GIKALVLEKSD 38 (232)
Q Consensus 6 ~dV~IvG~G~~G~~~A~~L~~~-g~~v~viE~~~ 38 (232)
..|+|+|+|..|..+|..|.+. |++|+++|+++
T Consensus 40 ~~v~IiG~G~~G~~~a~~L~~~~g~~V~vid~~~ 73 (183)
T 3c85_A 40 AQVLILGMGRIGTGAYDELRARYGKISLGIEIRE 73 (183)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHHCSCEEEEESCH
T ss_pred CcEEEECCCHHHHHHHHHHHhccCCeEEEEECCH
Confidence 4799999999999999999999 99999999875
No 317
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=97.04 E-value=0.00082 Score=50.93 Aligned_cols=34 Identities=18% Similarity=0.333 Sum_probs=31.5
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCcEEEEecCCC
Q 044609 6 EDVVIIGAGIAGLATAVALRRLGIKALVLEKSDG 39 (232)
Q Consensus 6 ~dV~IvG~G~~G~~~A~~L~~~g~~v~viE~~~~ 39 (232)
..|.|||+|..|..+|..|++.|++|+++|+++.
T Consensus 5 ~kV~VIGaG~mG~~iA~~la~~G~~V~l~d~~~~ 38 (283)
T 4e12_A 5 TNVTVLGTGVLGSQIAFQTAFHGFAVTAYDINTD 38 (283)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSHH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEeCCHH
Confidence 4799999999999999999999999999998753
No 318
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=97.03 E-value=0.00071 Score=52.19 Aligned_cols=38 Identities=18% Similarity=0.392 Sum_probs=33.2
Q ss_pred CCcccccEEEECCCHHHHHHHHHHHhCCC-cEEEEecCCC
Q 044609 1 MEMVEEDVVIIGAGIAGLATAVALRRLGI-KALVLEKSDG 39 (232)
Q Consensus 1 m~~~~~dV~IvG~G~~G~~~A~~L~~~g~-~v~viE~~~~ 39 (232)
|.+ ..+|.|||+|..|.++|..|++.|+ +|+++|+++.
T Consensus 1 M~~-~~kI~VIGaG~~G~~ia~~la~~g~~~V~l~D~~~~ 39 (317)
T 2ewd_A 1 MIE-RRKIAVIGSGQIGGNIAYIVGKDNLADVVLFDIAEG 39 (317)
T ss_dssp CCC-CCEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSSS
T ss_pred CCC-CCEEEEECCCHHHHHHHHHHHhCCCceEEEEeCCch
Confidence 553 3589999999999999999999998 9999998763
No 319
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=97.02 E-value=0.00079 Score=54.58 Aligned_cols=34 Identities=26% Similarity=0.377 Sum_probs=31.7
Q ss_pred cccEEEECCCHHHHHHHHHHHhCCCcEEEEecCC
Q 044609 5 EEDVVIIGAGIAGLATAVALRRLGIKALVLEKSD 38 (232)
Q Consensus 5 ~~dV~IvG~G~~G~~~A~~L~~~g~~v~viE~~~ 38 (232)
...|.|||.|.+|+++|..|+++|++|++.|++.
T Consensus 9 ~k~v~viG~G~sG~s~A~~l~~~G~~V~~~D~~~ 42 (451)
T 3lk7_A 9 NKKVLVLGLARSGEAAARLLAKLGAIVTVNDGKP 42 (451)
T ss_dssp TCEEEEECCTTTHHHHHHHHHHTTCEEEEEESSC
T ss_pred CCEEEEEeeCHHHHHHHHHHHhCCCEEEEEeCCc
Confidence 3689999999999999999999999999999865
No 320
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=97.01 E-value=0.002 Score=53.53 Aligned_cols=35 Identities=17% Similarity=0.441 Sum_probs=32.2
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCcEEEEecCCCC
Q 044609 6 EDVVIIGAGIAGLATAVALRRLGIKALVLEKSDGL 40 (232)
Q Consensus 6 ~dV~IvG~G~~G~~~A~~L~~~g~~v~viE~~~~~ 40 (232)
..|+|||+|.+|+-+|..|++.+.+|++++|.+..
T Consensus 187 k~V~VIG~G~sg~e~a~~l~~~~~~vtv~~r~~~~ 221 (542)
T 1w4x_A 187 QRVGVIGTGSSGIQVSPQIAKQAAELFVFQRTPHF 221 (542)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHBSEEEEEESSCCC
T ss_pred CEEEEECCCccHHHHHHHHhhcCceEEEEEcCCcc
Confidence 58999999999999999999999999999987654
No 321
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=96.99 E-value=0.00058 Score=49.59 Aligned_cols=33 Identities=18% Similarity=0.268 Sum_probs=30.9
Q ss_pred cEEEECCCHHHHHHHHHHHhCCCcEEEEecCCC
Q 044609 7 DVVIIGAGIAGLATAVALRRLGIKALVLEKSDG 39 (232)
Q Consensus 7 dV~IvG~G~~G~~~A~~L~~~g~~v~viE~~~~ 39 (232)
+|+|+|+|..|..+|..|.++|++|+++|+++.
T Consensus 2 ~iiIiG~G~~G~~la~~L~~~g~~v~vid~~~~ 34 (218)
T 3l4b_C 2 KVIIIGGETTAYYLARSMLSRKYGVVIINKDRE 34 (218)
T ss_dssp CEEEECCHHHHHHHHHHHHHTTCCEEEEESCHH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCeEEEEECCHH
Confidence 499999999999999999999999999998764
No 322
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=96.96 E-value=0.00071 Score=51.57 Aligned_cols=33 Identities=24% Similarity=0.329 Sum_probs=30.7
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCcEEEEecCC
Q 044609 6 EDVVIIGAGIAGLATAVALRRLGIKALVLEKSD 38 (232)
Q Consensus 6 ~dV~IvG~G~~G~~~A~~L~~~g~~v~viE~~~ 38 (232)
.+|+|||+|-.|.++|..|++.|.+|++++|..
T Consensus 3 mkI~iiGaGa~G~~~a~~L~~~g~~V~~~~r~~ 35 (294)
T 3g17_A 3 LSVAIIGPGAVGTTIAYELQQSLPHTTLIGRHA 35 (294)
T ss_dssp CCEEEECCSHHHHHHHHHHHHHCTTCEEEESSC
T ss_pred cEEEEECCCHHHHHHHHHHHHCCCeEEEEEecc
Confidence 369999999999999999999999999999874
No 323
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=96.92 E-value=0.0011 Score=50.78 Aligned_cols=34 Identities=24% Similarity=0.329 Sum_probs=31.5
Q ss_pred cccEEEECCCHHHHHHHHHHHhCCCcEEEEecCC
Q 044609 5 EEDVVIIGAGIAGLATAVALRRLGIKALVLEKSD 38 (232)
Q Consensus 5 ~~dV~IvG~G~~G~~~A~~L~~~g~~v~viE~~~ 38 (232)
..+|.|||.|..|..+|..|++.|++|+++++++
T Consensus 7 ~~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~ 40 (303)
T 3g0o_A 7 DFHVGIVGLGSMGMGAARSCLRAGLSTWGADLNP 40 (303)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCeEEEEECCH
Confidence 3579999999999999999999999999999875
No 324
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=96.91 E-value=0.0011 Score=51.07 Aligned_cols=36 Identities=22% Similarity=0.362 Sum_probs=30.8
Q ss_pred ccccEEEECCCHHHHHHHHHHHhCCC--cEEEEecCCC
Q 044609 4 VEEDVVIIGAGIAGLATAVALRRLGI--KALVLEKSDG 39 (232)
Q Consensus 4 ~~~dV~IvG~G~~G~~~A~~L~~~g~--~v~viE~~~~ 39 (232)
+..+|+|||+|-.|.++|..|+..++ ++.++|.+..
T Consensus 6 ~~~KI~IiGaG~vG~~~a~~l~~~~~~~ev~L~Di~~~ 43 (318)
T 1y6j_A 6 SRSKVAIIGAGFVGASAAFTMALRQTANELVLIDVFKE 43 (318)
T ss_dssp -CCCEEEECCSHHHHHHHHHHHHTTCSSEEEEECCC--
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChH
Confidence 34789999999999999999999988 8999998753
No 325
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=96.88 E-value=0.0011 Score=53.58 Aligned_cols=34 Identities=24% Similarity=0.537 Sum_probs=31.4
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCcEEEEecCCC
Q 044609 6 EDVVIIGAGIAGLATAVALRRLGIKALVLEKSDG 39 (232)
Q Consensus 6 ~dV~IvG~G~~G~~~A~~L~~~g~~v~viE~~~~ 39 (232)
.+|.|||+|..|+.+|..|++.|++|+++|+++.
T Consensus 3 mkI~VIG~G~vG~~lA~~La~~G~~V~~~D~~~~ 36 (450)
T 3gg2_A 3 LDIAVVGIGYVGLVSATCFAELGANVRCIDTDRN 36 (450)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHH
T ss_pred CEEEEECcCHHHHHHHHHHHhcCCEEEEEECCHH
Confidence 3799999999999999999999999999998753
No 326
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=96.86 E-value=0.0011 Score=51.18 Aligned_cols=38 Identities=34% Similarity=0.511 Sum_probs=32.6
Q ss_pred CCcccccEEEECCCHHHHHHHHHHHhCCC--cEEEEecCC
Q 044609 1 MEMVEEDVVIIGAGIAGLATAVALRRLGI--KALVLEKSD 38 (232)
Q Consensus 1 m~~~~~dV~IvG~G~~G~~~A~~L~~~g~--~v~viE~~~ 38 (232)
|.+...+|.|||+|..|.++|..|+..|+ +++++|...
T Consensus 1 m~~~~~kI~ViGaG~vG~~~a~~l~~~~~~~~l~l~D~~~ 40 (326)
T 3pqe_A 1 MNKHVNKVALIGAGFVGSSYAFALINQGITDELVVIDVNK 40 (326)
T ss_dssp -CCSCCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSCH
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHhCCCCceEEEEecch
Confidence 65555789999999999999999999887 899999754
No 327
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=96.85 E-value=0.00075 Score=51.89 Aligned_cols=36 Identities=17% Similarity=0.218 Sum_probs=30.4
Q ss_pred CCcccccEEEECCCHHHHHHHHHHHhC-----C-CcEEEEec
Q 044609 1 MEMVEEDVVIIGAGIAGLATAVALRRL-----G-IKALVLEK 36 (232)
Q Consensus 1 m~~~~~dV~IvG~G~~G~~~A~~L~~~-----g-~~v~viE~ 36 (232)
|+.+..+|.|||+|..|.++|..|++. | ++|++++|
T Consensus 4 m~~~~m~I~iiG~G~mG~~~a~~L~~~~~~~~g~~~V~~~~r 45 (317)
T 2qyt_A 4 MNQQPIKIAVFGLGGVGGYYGAMLALRAAATDGLLEVSWIAR 45 (317)
T ss_dssp ---CCEEEEEECCSHHHHHHHHHHHHHHHHTTSSEEEEEECC
T ss_pred CCCCCCEEEEECcCHHHHHHHHHHHhCccccCCCCCEEEEEc
Confidence 444446899999999999999999998 9 99999987
No 328
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=96.84 E-value=0.0017 Score=46.89 Aligned_cols=34 Identities=21% Similarity=0.279 Sum_probs=31.7
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCcEEEEecCCC
Q 044609 6 EDVVIIGAGIAGLATAVALRRLGIKALVLEKSDG 39 (232)
Q Consensus 6 ~dV~IvG~G~~G~~~A~~L~~~g~~v~viE~~~~ 39 (232)
.+|.|||+|..|.++|..|++.|++|+++++.+.
T Consensus 20 ~~I~iiG~G~mG~~la~~l~~~g~~V~~~~~~~~ 53 (209)
T 2raf_A 20 MEITIFGKGNMGQAIGHNFEIAGHEVTYYGSKDQ 53 (209)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECTTCC
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHH
Confidence 5799999999999999999999999999998764
No 329
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=96.84 E-value=0.00047 Score=56.01 Aligned_cols=35 Identities=23% Similarity=0.313 Sum_probs=32.1
Q ss_pred cccEEEECCCHHHHHHHHHHHhCCCcEEEEecCCC
Q 044609 5 EEDVVIIGAGIAGLATAVALRRLGIKALVLEKSDG 39 (232)
Q Consensus 5 ~~dV~IvG~G~~G~~~A~~L~~~g~~v~viE~~~~ 39 (232)
..+|+|+|+|-.|..+|..|...|++|++||+++.
T Consensus 3 ~M~iiI~G~G~vG~~la~~L~~~~~~v~vId~d~~ 37 (461)
T 4g65_A 3 AMKIIILGAGQVGGTLAENLVGENNDITIVDKDGD 37 (461)
T ss_dssp CEEEEEECCSHHHHHHHHHTCSTTEEEEEEESCHH
T ss_pred cCEEEEECCCHHHHHHHHHHHHCCCCEEEEECCHH
Confidence 34799999999999999999999999999999863
No 330
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=96.83 E-value=0.0013 Score=50.38 Aligned_cols=32 Identities=22% Similarity=0.377 Sum_probs=30.2
Q ss_pred cEEEECCCHHHHHHHHHHHhCCCcEEEEecCC
Q 044609 7 DVVIIGAGIAGLATAVALRRLGIKALVLEKSD 38 (232)
Q Consensus 7 dV~IvG~G~~G~~~A~~L~~~g~~v~viE~~~ 38 (232)
+|.|||+|..|..+|..|++.|++|+++++++
T Consensus 5 ~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~ 36 (316)
T 2ew2_A 5 KIAIAGAGAMGSRLGIMLHQGGNDVTLIDQWP 36 (316)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred eEEEECcCHHHHHHHHHHHhCCCcEEEEECCH
Confidence 69999999999999999999999999999864
No 331
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=96.83 E-value=0.0016 Score=49.37 Aligned_cols=33 Identities=18% Similarity=0.233 Sum_probs=30.9
Q ss_pred cEEEECCCHHHHHHHHHHHhCCCcEEEEecCCC
Q 044609 7 DVVIIGAGIAGLATAVALRRLGIKALVLEKSDG 39 (232)
Q Consensus 7 dV~IvG~G~~G~~~A~~L~~~g~~v~viE~~~~ 39 (232)
+|.|||+|..|..+|..|++.|++|++++|++.
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~~ 34 (291)
T 1ks9_A 2 KITVLGCGALGQLWLTALCKQGHEVQGWLRVPQ 34 (291)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred eEEEECcCHHHHHHHHHHHhCCCCEEEEEcCcc
Confidence 599999999999999999999999999998764
No 332
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=96.83 E-value=0.0016 Score=50.38 Aligned_cols=34 Identities=26% Similarity=0.489 Sum_probs=31.5
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCC-cEEEEecCCC
Q 044609 6 EDVVIIGAGIAGLATAVALRRLGI-KALVLEKSDG 39 (232)
Q Consensus 6 ~dV~IvG~G~~G~~~A~~L~~~g~-~v~viE~~~~ 39 (232)
.+|.|||+|..|.++|..|++.|+ +|+++|.++.
T Consensus 15 ~kI~ViGaG~vG~~iA~~la~~g~~~V~L~Di~~~ 49 (328)
T 2hjr_A 15 KKISIIGAGQIGSTIALLLGQKDLGDVYMFDIIEG 49 (328)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSTT
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCHH
Confidence 579999999999999999999999 9999998764
No 333
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=96.83 E-value=0.00098 Score=50.86 Aligned_cols=36 Identities=17% Similarity=0.081 Sum_probs=32.9
Q ss_pred cccEEEECCCHHHHHHHHHHHhCCCcEEEEecCCCC
Q 044609 5 EEDVVIIGAGIAGLATAVALRRLGIKALVLEKSDGL 40 (232)
Q Consensus 5 ~~dV~IvG~G~~G~~~A~~L~~~g~~v~viE~~~~~ 40 (232)
..+|.|||.|..|..+|..|++.|++|+++++++..
T Consensus 15 ~~~I~vIG~G~mG~~~A~~l~~~G~~V~~~dr~~~~ 50 (296)
T 3qha_A 15 QLKLGYIGLGNMGAPMATRMTEWPGGVTVYDIRIEA 50 (296)
T ss_dssp CCCEEEECCSTTHHHHHHHHTTSTTCEEEECSSTTT
T ss_pred CCeEEEECcCHHHHHHHHHHHHCCCeEEEEeCCHHH
Confidence 358999999999999999999999999999998754
No 334
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=96.82 E-value=0.0014 Score=50.84 Aligned_cols=35 Identities=23% Similarity=0.351 Sum_probs=31.5
Q ss_pred ccccEEEECCCHHHHHHHHHHHhCCCcEEEEecCC
Q 044609 4 VEEDVVIIGAGIAGLATAVALRRLGIKALVLEKSD 38 (232)
Q Consensus 4 ~~~dV~IvG~G~~G~~~A~~L~~~g~~v~viE~~~ 38 (232)
|+.+|.|||+|..|.++|..|++.|++|++++|.+
T Consensus 13 ~~~kI~iIG~G~mG~ala~~L~~~G~~V~~~~r~~ 47 (335)
T 1z82_A 13 MEMRFFVLGAGSWGTVFAQMLHENGEEVILWARRK 47 (335)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSH
T ss_pred cCCcEEEECcCHHHHHHHHHHHhCCCeEEEEeCCH
Confidence 34689999999999999999999999999999864
No 335
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=96.80 E-value=0.0015 Score=49.70 Aligned_cols=34 Identities=26% Similarity=0.435 Sum_probs=31.3
Q ss_pred cccEEEECCCHHHHHHHHHHHhCCCcEEEEecCCC
Q 044609 5 EEDVVIIGAGIAGLATAVALRRLGIKALVLEKSDG 39 (232)
Q Consensus 5 ~~dV~IvG~G~~G~~~A~~L~~~g~~v~viE~~~~ 39 (232)
+..|.|||+|..|...|..|+ .|++|+++|+.+.
T Consensus 12 ~~~V~vIG~G~MG~~iA~~la-aG~~V~v~d~~~~ 45 (293)
T 1zej_A 12 HMKVFVIGAGLMGRGIAIAIA-SKHEVVLQDVSEK 45 (293)
T ss_dssp CCEEEEECCSHHHHHHHHHHH-TTSEEEEECSCHH
T ss_pred CCeEEEEeeCHHHHHHHHHHH-cCCEEEEEECCHH
Confidence 478999999999999999999 9999999998753
No 336
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=96.80 E-value=0.0019 Score=49.72 Aligned_cols=35 Identities=31% Similarity=0.463 Sum_probs=31.5
Q ss_pred ccccEEEECCCHHHHHHHHHHHhCCC--cEEEEecCC
Q 044609 4 VEEDVVIIGAGIAGLATAVALRRLGI--KALVLEKSD 38 (232)
Q Consensus 4 ~~~dV~IvG~G~~G~~~A~~L~~~g~--~v~viE~~~ 38 (232)
+..+|.|||+|..|.++|..|.+.|+ +|.++++++
T Consensus 32 ~~~kI~IIG~G~mG~slA~~l~~~G~~~~V~~~dr~~ 68 (314)
T 3ggo_A 32 SMQNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINP 68 (314)
T ss_dssp SCSEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCH
T ss_pred CCCEEEEEeeCHHHHHHHHHHHhCCCCCEEEEEECCH
Confidence 33689999999999999999999999 999999865
No 337
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=96.79 E-value=0.0013 Score=47.75 Aligned_cols=33 Identities=15% Similarity=0.285 Sum_probs=30.8
Q ss_pred cccEEEECCCHHHHHHHHHHHhCCCcEEEEecC
Q 044609 5 EEDVVIIGAGIAGLATAVALRRLGIKALVLEKS 37 (232)
Q Consensus 5 ~~dV~IvG~G~~G~~~A~~L~~~g~~v~viE~~ 37 (232)
...|+|||||.+|...|..|.+.|.+|+|+++.
T Consensus 31 gk~VLVVGgG~va~~ka~~Ll~~GA~VtVvap~ 63 (223)
T 3dfz_A 31 GRSVLVVGGGTIATRRIKGFLQEGAAITVVAPT 63 (223)
T ss_dssp TCCEEEECCSHHHHHHHHHHGGGCCCEEEECSS
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEECCC
Confidence 468999999999999999999999999999975
No 338
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=96.79 E-value=0.015 Score=44.32 Aligned_cols=33 Identities=9% Similarity=0.170 Sum_probs=25.4
Q ss_pred ccEEEECCCHH-HHHHHHHHHhCCCcEEEEecCC
Q 044609 6 EDVVIIGAGIA-GLATAVALRRLGIKALVLEKSD 38 (232)
Q Consensus 6 ~dV~IvG~G~~-G~~~A~~L~~~g~~v~viE~~~ 38 (232)
.+++|||||.. ++.+|..+.+.+.+|+++++.+
T Consensus 147 ~~~~VIggG~~~~~e~a~~~~~~~~~v~i~~~~~ 180 (304)
T 4fk1_A 147 QPLIIISENEDHTLHMTKLVYNWSTDLVIATNGN 180 (304)
T ss_dssp SCEEEECCSHHHHHHHHHHHTTTCSCEEEECSSC
T ss_pred CceeeecCCCchhhhHHHHHHhCCceEEEEeccc
Confidence 46888888864 5777888877889999987654
No 339
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=96.78 E-value=0.00088 Score=51.66 Aligned_cols=34 Identities=18% Similarity=0.114 Sum_probs=31.6
Q ss_pred cccEEEECCCHHHHHHHHHHHhCC-CcEEEEecCC
Q 044609 5 EEDVVIIGAGIAGLATAVALRRLG-IKALVLEKSD 38 (232)
Q Consensus 5 ~~dV~IvG~G~~G~~~A~~L~~~g-~~v~viE~~~ 38 (232)
..+|.|||.|..|..+|..|++.| ++|+++++.+
T Consensus 24 ~m~IgvIG~G~mG~~lA~~L~~~G~~~V~~~dr~~ 58 (317)
T 4ezb_A 24 MTTIAFIGFGEAAQSIAGGLGGRNAARLAAYDLRF 58 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCSEEEEECGGG
T ss_pred CCeEEEECccHHHHHHHHHHHHcCCCeEEEEeCCC
Confidence 357999999999999999999999 9999999875
No 340
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=96.77 E-value=0.0017 Score=50.09 Aligned_cols=33 Identities=27% Similarity=0.451 Sum_probs=30.7
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCC--cEEEEecCC
Q 044609 6 EDVVIIGAGIAGLATAVALRRLGI--KALVLEKSD 38 (232)
Q Consensus 6 ~dV~IvG~G~~G~~~A~~L~~~g~--~v~viE~~~ 38 (232)
.+|+|||+|..|.++|..|++.|+ +|+++|+++
T Consensus 8 mkI~IiGaG~vG~~~a~~l~~~g~~~~V~l~d~~~ 42 (319)
T 1lld_A 8 TKLAVIGAGAVGSTLAFAAAQRGIAREIVLEDIAK 42 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 579999999999999999999998 999999864
No 341
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=96.74 E-value=0.00085 Score=52.80 Aligned_cols=32 Identities=25% Similarity=0.365 Sum_probs=30.2
Q ss_pred cEEEECCCHHHHHHHHHHHhCCCcEEEEecCC
Q 044609 7 DVVIIGAGIAGLATAVALRRLGIKALVLEKSD 38 (232)
Q Consensus 7 dV~IvG~G~~G~~~A~~L~~~g~~v~viE~~~ 38 (232)
+|.|||+|..|.++|..|++.|++|+++++.+
T Consensus 17 kI~iIG~G~mG~~la~~L~~~G~~V~~~~r~~ 48 (366)
T 1evy_A 17 KAVVFGSGAFGTALAMVLSKKCREVCVWHMNE 48 (366)
T ss_dssp EEEEECCSHHHHHHHHHHTTTEEEEEEECSCH
T ss_pred eEEEECCCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 79999999999999999999999999999864
No 342
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=96.72 E-value=0.0022 Score=49.12 Aligned_cols=34 Identities=32% Similarity=0.479 Sum_probs=31.7
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCcEEEEecCCC
Q 044609 6 EDVVIIGAGIAGLATAVALRRLGIKALVLEKSDG 39 (232)
Q Consensus 6 ~dV~IvG~G~~G~~~A~~L~~~g~~v~viE~~~~ 39 (232)
.+|.|||.|..|..+|..|++.|++|+++++.+.
T Consensus 10 ~~IgiIG~G~mG~~~A~~l~~~G~~V~~~dr~~~ 43 (306)
T 3l6d_A 10 FDVSVIGLGAMGTIMAQVLLKQGKRVAIWNRSPG 43 (306)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEECSSHH
T ss_pred CeEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 5899999999999999999999999999998754
No 343
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=96.71 E-value=0.0019 Score=50.58 Aligned_cols=33 Identities=24% Similarity=0.297 Sum_probs=30.9
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCcEEEEecCC
Q 044609 6 EDVVIIGAGIAGLATAVALRRLGIKALVLEKSD 38 (232)
Q Consensus 6 ~dV~IvG~G~~G~~~A~~L~~~g~~v~viE~~~ 38 (232)
.+|.|||+|..|..+|..|++.|++|+++++.+
T Consensus 5 mki~iiG~G~~G~~~a~~L~~~g~~V~~~~r~~ 37 (359)
T 1bg6_A 5 KTYAVLGLGNGGHAFAAYLALKGQSVLAWDIDA 37 (359)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 589999999999999999999999999999864
No 344
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=96.71 E-value=0.0023 Score=49.24 Aligned_cols=34 Identities=18% Similarity=0.392 Sum_probs=31.5
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCcEEEEecCCC
Q 044609 6 EDVVIIGAGIAGLATAVALRRLGIKALVLEKSDG 39 (232)
Q Consensus 6 ~dV~IvG~G~~G~~~A~~L~~~g~~v~viE~~~~ 39 (232)
.+|.|||+|..|..+|..|++.|++|+++++.+.
T Consensus 31 ~~I~iIG~G~mG~~~a~~l~~~g~~V~~~~~~~~ 64 (316)
T 2uyy_A 31 KKIGFLGLGLMGSGIVSNLLKMGHTVTVWNRTAE 64 (316)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCEEEECSSGG
T ss_pred CeEEEEcccHHHHHHHHHHHhCCCEEEEEeCCHH
Confidence 5799999999999999999999999999998754
No 345
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=96.70 E-value=0.0018 Score=52.79 Aligned_cols=34 Identities=29% Similarity=0.557 Sum_probs=31.5
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCcEEEEecCCC
Q 044609 6 EDVVIIGAGIAGLATAVALRRLGIKALVLEKSDG 39 (232)
Q Consensus 6 ~dV~IvG~G~~G~~~A~~L~~~g~~v~viE~~~~ 39 (232)
.+|.|||+|..|+.+|..|++.|++|+++|+++.
T Consensus 9 ~~I~VIG~G~vG~~lA~~la~~G~~V~~~d~~~~ 42 (478)
T 2y0c_A 9 MNLTIIGSGSVGLVTGACLADIGHDVFCLDVDQA 42 (478)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHH
T ss_pred ceEEEECcCHHHHHHHHHHHhCCCEEEEEECCHH
Confidence 5899999999999999999999999999998753
No 346
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=96.70 E-value=0.0019 Score=49.56 Aligned_cols=32 Identities=31% Similarity=0.365 Sum_probs=29.6
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCcEEEEecCC
Q 044609 6 EDVVIIGAGIAGLATAVALRRLGIKALVLEKSD 38 (232)
Q Consensus 6 ~dV~IvG~G~~G~~~A~~L~~~g~~v~viE~~~ 38 (232)
.+|+|||+|-.|.++|..|+ .|.+|++++|.+
T Consensus 3 mkI~IiGaGa~G~~~a~~L~-~g~~V~~~~r~~ 34 (307)
T 3ego_A 3 LKIGIIGGGSVGLLCAYYLS-LYHDVTVVTRRQ 34 (307)
T ss_dssp CEEEEECCSHHHHHHHHHHH-TTSEEEEECSCH
T ss_pred CEEEEECCCHHHHHHHHHHh-cCCceEEEECCH
Confidence 36999999999999999999 999999999864
No 347
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=96.66 E-value=0.0027 Score=49.03 Aligned_cols=34 Identities=15% Similarity=0.412 Sum_probs=31.1
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCC-cEEEEecCCC
Q 044609 6 EDVVIIGAGIAGLATAVALRRLGI-KALVLEKSDG 39 (232)
Q Consensus 6 ~dV~IvG~G~~G~~~A~~L~~~g~-~v~viE~~~~ 39 (232)
.+|.|||+|..|..+|..|+..|+ +|.++|.++.
T Consensus 5 ~kI~VIGaG~vG~~ia~~la~~g~~~v~L~Di~~~ 39 (322)
T 1t2d_A 5 AKIVLVGSGMIGGVMATLIVQKNLGDVVLFDIVKN 39 (322)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCHH
Confidence 479999999999999999999998 9999998753
No 348
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=96.66 E-value=0.0011 Score=48.30 Aligned_cols=34 Identities=29% Similarity=0.366 Sum_probs=30.8
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCcEEE-EecCCC
Q 044609 6 EDVVIIGAGIAGLATAVALRRLGIKALV-LEKSDG 39 (232)
Q Consensus 6 ~dV~IvG~G~~G~~~A~~L~~~g~~v~v-iE~~~~ 39 (232)
.+|.|||+|..|.++|..|++.|++|++ ++|++.
T Consensus 24 mkI~IIG~G~mG~~la~~l~~~g~~V~~v~~r~~~ 58 (220)
T 4huj_A 24 TTYAIIGAGAIGSALAERFTAAQIPAIIANSRGPA 58 (220)
T ss_dssp CCEEEEECHHHHHHHHHHHHHTTCCEEEECTTCGG
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEECCCHH
Confidence 4799999999999999999999999998 887654
No 349
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=96.65 E-value=0.002 Score=52.34 Aligned_cols=34 Identities=21% Similarity=0.431 Sum_probs=32.2
Q ss_pred ccEEEECCCHHHHHHHHHHHhC-CC-cEEEEecCCC
Q 044609 6 EDVVIIGAGIAGLATAVALRRL-GI-KALVLEKSDG 39 (232)
Q Consensus 6 ~dV~IvG~G~~G~~~A~~L~~~-g~-~v~viE~~~~ 39 (232)
.+|.|||+|..|+.+|..|+++ |+ +|+++|+++.
T Consensus 19 mkIaVIGlG~mG~~lA~~la~~~G~~~V~~~D~~~~ 54 (478)
T 3g79_A 19 KKIGVLGMGYVGIPAAVLFADAPCFEKVLGFQRNSK 54 (478)
T ss_dssp CEEEEECCSTTHHHHHHHHHHSTTCCEEEEECCCCT
T ss_pred CEEEEECcCHHHHHHHHHHHHhCCCCeEEEEECChh
Confidence 4799999999999999999999 99 9999999876
No 350
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=96.62 E-value=0.0028 Score=46.88 Aligned_cols=35 Identities=23% Similarity=0.359 Sum_probs=32.1
Q ss_pred cccEEEECCCHHHHHHHHHHHhCCCcEEEEecCCC
Q 044609 5 EEDVVIIGAGIAGLATAVALRRLGIKALVLEKSDG 39 (232)
Q Consensus 5 ~~dV~IvG~G~~G~~~A~~L~~~g~~v~viE~~~~ 39 (232)
..+|.|||+|..|.++|..|++.|++|++++|.+.
T Consensus 19 ~~kIgiIG~G~mG~alA~~L~~~G~~V~~~~r~~~ 53 (245)
T 3dtt_A 19 GMKIAVLGTGTVGRTMAGALADLGHEVTIGTRDPK 53 (245)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCEEEEEeCChh
Confidence 36899999999999999999999999999998754
No 351
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=96.61 E-value=0.0026 Score=51.36 Aligned_cols=35 Identities=20% Similarity=0.475 Sum_probs=32.8
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCcEEEEecCCCC
Q 044609 6 EDVVIIGAGIAGLATAVALRRLGIKALVLEKSDGL 40 (232)
Q Consensus 6 ~dV~IvG~G~~G~~~A~~L~~~g~~v~viE~~~~~ 40 (232)
.++.|||.|..|+.+|..|++.|++|+++|+++..
T Consensus 9 ~~~~vIGlG~vG~~~A~~La~~G~~V~~~D~~~~k 43 (446)
T 4a7p_A 9 VRIAMIGTGYVGLVSGACFSDFGHEVVCVDKDARK 43 (446)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCSTT
T ss_pred eEEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCHHH
Confidence 68999999999999999999999999999998764
No 352
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*
Probab=96.61 E-value=0.002 Score=51.98 Aligned_cols=36 Identities=28% Similarity=0.429 Sum_probs=32.4
Q ss_pred cccEEEECCCHHHHHHHHHHHhCCCcEEEEecCCCC
Q 044609 5 EEDVVIIGAGIAGLATAVALRRLGIKALVLEKSDGL 40 (232)
Q Consensus 5 ~~dV~IvG~G~~G~~~A~~L~~~g~~v~viE~~~~~ 40 (232)
...|.|||.|.+|+++|..|+++|++|++.|.....
T Consensus 5 ~~~v~viG~G~~G~~~a~~l~~~G~~v~~~D~~~~~ 40 (439)
T 2x5o_A 5 GKNVVIIGLGLTGLSCVDFFLARGVTPRVMDTRMTP 40 (439)
T ss_dssp TCCEEEECCHHHHHHHHHHHHTTTCCCEEEESSSSC
T ss_pred CCEEEEEeecHHHHHHHHHHHhCCCEEEEEECCCCc
Confidence 357999999999999999999999999999987644
No 353
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=96.61 E-value=0.0029 Score=48.78 Aligned_cols=34 Identities=18% Similarity=0.401 Sum_probs=31.4
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCC-cEEEEecCCC
Q 044609 6 EDVVIIGAGIAGLATAVALRRLGI-KALVLEKSDG 39 (232)
Q Consensus 6 ~dV~IvG~G~~G~~~A~~L~~~g~-~v~viE~~~~ 39 (232)
.+|.|||+|..|.++|..|+..|+ +++++|..+.
T Consensus 8 ~kI~viGaG~vG~~~a~~l~~~~~~~v~L~Di~~~ 42 (324)
T 3gvi_A 8 NKIALIGSGMIGGTLAHLAGLKELGDVVLFDIAEG 42 (324)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCch
Confidence 479999999999999999999999 9999998764
No 354
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=96.59 E-value=0.0027 Score=51.30 Aligned_cols=34 Identities=29% Similarity=0.556 Sum_probs=31.8
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCcEEEEecCCC
Q 044609 6 EDVVIIGAGIAGLATAVALRRLGIKALVLEKSDG 39 (232)
Q Consensus 6 ~dV~IvG~G~~G~~~A~~L~~~g~~v~viE~~~~ 39 (232)
..|.|||+|..|..+|..|++.|++|+++|+++.
T Consensus 55 ~kVaVIGaG~MG~~IA~~la~aG~~V~l~D~~~e 88 (460)
T 3k6j_A 55 NSVAIIGGGTMGKAMAICFGLAGIETFLVVRNEQ 88 (460)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHH
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCeEEEEECcHH
Confidence 4799999999999999999999999999998765
No 355
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=96.55 E-value=0.0013 Score=49.37 Aligned_cols=34 Identities=24% Similarity=0.400 Sum_probs=31.3
Q ss_pred cccEEEECCCHHHHHHHHHHHhCCCcEEEEecCC
Q 044609 5 EEDVVIIGAGIAGLATAVALRRLGIKALVLEKSD 38 (232)
Q Consensus 5 ~~dV~IvG~G~~G~~~A~~L~~~g~~v~viE~~~ 38 (232)
...|+|||||.+|...|..|.+.|.+|+|+++..
T Consensus 13 ~k~VLVVGgG~va~rka~~Ll~~Ga~VtViap~~ 46 (274)
T 1kyq_A 13 DKRILLIGGGEVGLTRLYKLMPTGCKLTLVSPDL 46 (274)
T ss_dssp TCEEEEEEESHHHHHHHHHHGGGTCEEEEEEEEE
T ss_pred CCEEEEECCcHHHHHHHHHHHhCCCEEEEEcCCC
Confidence 4689999999999999999999999999999754
No 356
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=96.54 E-value=0.0028 Score=51.52 Aligned_cols=34 Identities=26% Similarity=0.521 Sum_probs=31.2
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCcEEEEecCCC
Q 044609 6 EDVVIIGAGIAGLATAVALRRLGIKALVLEKSDG 39 (232)
Q Consensus 6 ~dV~IvG~G~~G~~~A~~L~~~g~~v~viE~~~~ 39 (232)
.+|.|||+|..|..+|..|++.|++|+++|+++.
T Consensus 38 ~kV~VIGaG~MG~~iA~~la~~G~~V~l~D~~~~ 71 (463)
T 1zcj_A 38 SSVGVLGLGTMGRGIAISFARVGISVVAVESDPK 71 (463)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCEEEEECSSHH
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCeEEEEECCHH
Confidence 4699999999999999999999999999998753
No 357
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=96.52 E-value=0.0026 Score=50.88 Aligned_cols=35 Identities=31% Similarity=0.391 Sum_probs=32.2
Q ss_pred cccEEEECCCHHHHHHHHHHHhCCCcEEEEecCCC
Q 044609 5 EEDVVIIGAGIAGLATAVALRRLGIKALVLEKSDG 39 (232)
Q Consensus 5 ~~dV~IvG~G~~G~~~A~~L~~~g~~v~viE~~~~ 39 (232)
+..|+|||+|..|..+|..|.+.|++|++||+++.
T Consensus 4 ~~~viIiG~Gr~G~~va~~L~~~g~~vvvId~d~~ 38 (413)
T 3l9w_A 4 GMRVIIAGFGRFGQITGRLLLSSGVKMVVLDHDPD 38 (413)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEECCHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCCEEEEECCHH
Confidence 34699999999999999999999999999999864
No 358
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=96.52 E-value=0.0033 Score=49.83 Aligned_cols=34 Identities=29% Similarity=0.540 Sum_probs=31.7
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCcEEEEecCCC
Q 044609 6 EDVVIIGAGIAGLATAVALRRLGIKALVLEKSDG 39 (232)
Q Consensus 6 ~dV~IvG~G~~G~~~A~~L~~~g~~v~viE~~~~ 39 (232)
..|+|+|+|.+|+.+|..+...|.+|+++|+.+.
T Consensus 191 ~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~~ 224 (405)
T 4dio_A 191 AKIFVMGAGVAGLQAIATARRLGAVVSATDVRPA 224 (405)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSTT
T ss_pred CEEEEECCcHHHHHHHHHHHHCCCEEEEEcCCHH
Confidence 5899999999999999999999999999998864
No 359
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=96.52 E-value=0.0038 Score=48.12 Aligned_cols=34 Identities=18% Similarity=0.322 Sum_probs=31.2
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCC-cEEEEecCCC
Q 044609 6 EDVVIIGAGIAGLATAVALRRLGI-KALVLEKSDG 39 (232)
Q Consensus 6 ~dV~IvG~G~~G~~~A~~L~~~g~-~v~viE~~~~ 39 (232)
.+|.|||+|..|.++|..|+..++ ++.++|..+.
T Consensus 6 ~kI~iiGaG~vG~~~a~~l~~~~~~~v~l~Di~~~ 40 (321)
T 3p7m_A 6 KKITLVGAGNIGGTLAHLALIKQLGDVVLFDIAQG 40 (321)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCceEEEEeCChH
Confidence 579999999999999999999988 9999998764
No 360
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=96.50 E-value=0.0032 Score=48.18 Aligned_cols=32 Identities=25% Similarity=0.508 Sum_probs=30.0
Q ss_pred cEEEECCCHHHHHHHHHHHhCCC--cEEEEecCC
Q 044609 7 DVVIIGAGIAGLATAVALRRLGI--KALVLEKSD 38 (232)
Q Consensus 7 dV~IvG~G~~G~~~A~~L~~~g~--~v~viE~~~ 38 (232)
+|+|||+|..|.++|..|+.+|+ +|.++|+++
T Consensus 2 kI~VIGaG~vG~~la~~la~~g~~~eV~L~D~~~ 35 (304)
T 2v6b_A 2 KVGVVGTGFVGSTAAFALVLRGSCSELVLVDRDE 35 (304)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCH
Confidence 59999999999999999999998 999999864
No 361
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=96.50 E-value=0.0036 Score=48.01 Aligned_cols=33 Identities=30% Similarity=0.458 Sum_probs=30.2
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCC-cEEEEecCC
Q 044609 6 EDVVIIGAGIAGLATAVALRRLGI-KALVLEKSD 38 (232)
Q Consensus 6 ~dV~IvG~G~~G~~~A~~L~~~g~-~v~viE~~~ 38 (232)
.+|.|||+|..|..+|..|+..|+ +|.++|.++
T Consensus 3 ~kI~VIGaG~vG~~~a~~la~~g~~~v~L~Di~~ 36 (309)
T 1ur5_A 3 KKISIIGAGFVGSTTAHWLAAKELGDIVLLDIVE 36 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCSEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCCeEEEEeCCc
Confidence 379999999999999999999997 999999875
No 362
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=96.48 E-value=0.0025 Score=49.01 Aligned_cols=33 Identities=27% Similarity=0.326 Sum_probs=30.8
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCC-cEEEEecCC
Q 044609 6 EDVVIIGAGIAGLATAVALRRLGI-KALVLEKSD 38 (232)
Q Consensus 6 ~dV~IvG~G~~G~~~A~~L~~~g~-~v~viE~~~ 38 (232)
.+|.|||.|..|..+|..|++.|+ +|+++++.+
T Consensus 25 ~~I~iIG~G~mG~~~A~~L~~~G~~~V~~~dr~~ 58 (312)
T 3qsg_A 25 MKLGFIGFGEAASAIASGLRQAGAIDMAAYDAAS 58 (312)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSCCEEEEECSSC
T ss_pred CEEEEECccHHHHHHHHHHHHCCCCeEEEEcCCC
Confidence 579999999999999999999999 999999963
No 363
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=96.48 E-value=0.0027 Score=47.15 Aligned_cols=33 Identities=27% Similarity=0.402 Sum_probs=30.9
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCC-cEEEEecCC
Q 044609 6 EDVVIIGAGIAGLATAVALRRLGI-KALVLEKSD 38 (232)
Q Consensus 6 ~dV~IvG~G~~G~~~A~~L~~~g~-~v~viE~~~ 38 (232)
.+|+|||+|-.|..+|..|++.|+ +++|+|++.
T Consensus 32 ~~VlVvG~Gg~G~~va~~La~~Gv~~i~lvD~d~ 65 (249)
T 1jw9_B 32 SRVLIVGLGGLGCAASQYLASAGVGNLTLLDFDT 65 (249)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCB
T ss_pred CeEEEEeeCHHHHHHHHHHHHcCCCeEEEEcCCC
Confidence 589999999999999999999998 899999876
No 364
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=96.47 E-value=0.0046 Score=46.64 Aligned_cols=37 Identities=30% Similarity=0.392 Sum_probs=32.3
Q ss_pred CCcccccEEEECCCHHHHHHHHHHHhCCCcEEEEecCCC
Q 044609 1 MEMVEEDVVIIGAGIAGLATAVALRRLGIKALVLEKSDG 39 (232)
Q Consensus 1 m~~~~~dV~IvG~G~~G~~~A~~L~~~g~~v~viE~~~~ 39 (232)
|+++ .|+|.|+|..|..++..|.++|++|+++.|...
T Consensus 1 M~~~--~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~~ 37 (286)
T 3gpi_A 1 MSLS--KILIAGCGDLGLELARRLTAQGHEVTGLRRSAQ 37 (286)
T ss_dssp -CCC--CEEEECCSHHHHHHHHHHHHTTCCEEEEECTTS
T ss_pred CCCC--cEEEECCCHHHHHHHHHHHHCCCEEEEEeCCcc
Confidence 5544 699999999999999999999999999998754
No 365
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=96.46 E-value=0.0033 Score=51.31 Aligned_cols=36 Identities=14% Similarity=0.362 Sum_probs=32.2
Q ss_pred ccccEEEECCCHHHHHHHHHHHhCCCcEEEEecCCC
Q 044609 4 VEEDVVIIGAGIAGLATAVALRRLGIKALVLEKSDG 39 (232)
Q Consensus 4 ~~~dV~IvG~G~~G~~~A~~L~~~g~~v~viE~~~~ 39 (232)
.+.+|.|||+|..|..+|..|+++|++|++++|.+.
T Consensus 14 ~~~~IgvIGlG~MG~~lA~~La~~G~~V~v~~r~~~ 49 (480)
T 2zyd_A 14 SKQQIGVVGMAVMGRNLALNIESRGYTVSIFNRSRE 49 (480)
T ss_dssp -CBSEEEECCSHHHHHHHHHHHTTTCCEEEECSSHH
T ss_pred CCCeEEEEccHHHHHHHHHHHHhCCCeEEEEeCCHH
Confidence 346899999999999999999999999999998753
No 366
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=96.45 E-value=0.0044 Score=46.85 Aligned_cols=34 Identities=24% Similarity=0.300 Sum_probs=31.2
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCC---cEEEEecCCC
Q 044609 6 EDVVIIGAGIAGLATAVALRRLGI---KALVLEKSDG 39 (232)
Q Consensus 6 ~dV~IvG~G~~G~~~A~~L~~~g~---~v~viE~~~~ 39 (232)
.+|.|||+|..|.++|..|.+.|+ +|.++++++.
T Consensus 4 ~~I~iIG~G~mG~aia~~l~~~g~~~~~V~v~dr~~~ 40 (280)
T 3tri_A 4 SNITFIGGGNMARNIVVGLIANGYDPNRICVTNRSLD 40 (280)
T ss_dssp SCEEEESCSHHHHHHHHHHHHTTCCGGGEEEECSSSH
T ss_pred CEEEEEcccHHHHHHHHHHHHCCCCCCeEEEEeCCHH
Confidence 579999999999999999999998 9999998753
No 367
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}
Probab=96.43 E-value=0.004 Score=48.42 Aligned_cols=33 Identities=21% Similarity=0.282 Sum_probs=31.0
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCcEEEEecCC
Q 044609 6 EDVVIIGAGIAGLATAVALRRLGIKALVLEKSD 38 (232)
Q Consensus 6 ~dV~IvG~G~~G~~~A~~L~~~g~~v~viE~~~ 38 (232)
..|.|||.|..|.++|..|.+.|++|.++++++
T Consensus 9 ~kIgIIG~G~mG~slA~~L~~~G~~V~~~dr~~ 41 (341)
T 3ktd_A 9 RPVCILGLGLIGGSLLRDLHAANHSVFGYNRSR 41 (341)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred CEEEEEeecHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 579999999999999999999999999999875
No 368
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=96.42 E-value=0.0046 Score=46.80 Aligned_cols=33 Identities=21% Similarity=0.295 Sum_probs=30.5
Q ss_pred ccEEEECC-CHHHHHHHHHHHhCCCcEEEEecCC
Q 044609 6 EDVVIIGA-GIAGLATAVALRRLGIKALVLEKSD 38 (232)
Q Consensus 6 ~dV~IvG~-G~~G~~~A~~L~~~g~~v~viE~~~ 38 (232)
.+|.|||+ |..|..+|..|++.|++|+++++.+
T Consensus 12 m~I~iIG~tG~mG~~la~~l~~~g~~V~~~~r~~ 45 (286)
T 3c24_A 12 KTVAILGAGGKMGARITRKIHDSAHHLAAIEIAP 45 (286)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHSSSEEEEECCSH
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 47999999 9999999999999999999999864
No 369
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=96.41 E-value=0.00094 Score=48.83 Aligned_cols=38 Identities=24% Similarity=0.251 Sum_probs=32.3
Q ss_pred CCcccccEEEECCCHHHHHHHHHHHhCCCcEEEEecCC
Q 044609 1 MEMVEEDVVIIGAGIAGLATAVALRRLGIKALVLEKSD 38 (232)
Q Consensus 1 m~~~~~dV~IvG~G~~G~~~A~~L~~~g~~v~viE~~~ 38 (232)
|.....+|.|||+|..|.++|..|++.|++|+.+++..
T Consensus 2 ~~~~~mkI~IIG~G~~G~sLA~~L~~~G~~V~~~~~~~ 39 (232)
T 3dfu_A 2 MQAPRLRVGIFDDGSSTVNMAEKLDSVGHYVTVLHAPE 39 (232)
T ss_dssp -CCCCCEEEEECCSCCCSCHHHHHHHTTCEEEECSSGG
T ss_pred CCCCCcEEEEEeeCHHHHHHHHHHHHCCCEEEEecCHH
Confidence 33344589999999999999999999999999999853
No 370
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=96.41 E-value=0.004 Score=50.99 Aligned_cols=36 Identities=14% Similarity=0.291 Sum_probs=32.8
Q ss_pred ccccEEEECCCHHHHHHHHHHHhCCCcEEEEecCCC
Q 044609 4 VEEDVVIIGAGIAGLATAVALRRLGIKALVLEKSDG 39 (232)
Q Consensus 4 ~~~dV~IvG~G~~G~~~A~~L~~~g~~v~viE~~~~ 39 (232)
|..+|.|||.|..|..+|..|+++|++|++++|.+.
T Consensus 9 ~~~~IgvIGlG~MG~~lA~~La~~G~~V~v~dr~~~ 44 (497)
T 2p4q_A 9 MSADFGLIGLAVMGQNLILNAADHGFTVCAYNRTQS 44 (497)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSH
T ss_pred CCCCEEEEeeHHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 346899999999999999999999999999998764
No 371
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=96.40 E-value=0.0037 Score=47.34 Aligned_cols=34 Identities=29% Similarity=0.362 Sum_probs=31.5
Q ss_pred cEEEECCCHHHHHHHHHHHhCCCcEEEEecCCCC
Q 044609 7 DVVIIGAGIAGLATAVALRRLGIKALVLEKSDGL 40 (232)
Q Consensus 7 dV~IvG~G~~G~~~A~~L~~~g~~v~viE~~~~~ 40 (232)
+|.|||+|..|..+|..|++.|++|+++++++..
T Consensus 3 ~i~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~~~ 36 (287)
T 3pef_A 3 KFGFIGLGIMGSAMAKNLVKAGCSVTIWNRSPEK 36 (287)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSSGGG
T ss_pred EEEEEeecHHHHHHHHHHHHCCCeEEEEcCCHHH
Confidence 6999999999999999999999999999997643
No 372
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=96.39 E-value=0.0045 Score=47.52 Aligned_cols=34 Identities=29% Similarity=0.432 Sum_probs=31.7
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCcEEEEecCCC
Q 044609 6 EDVVIIGAGIAGLATAVALRRLGIKALVLEKSDG 39 (232)
Q Consensus 6 ~dV~IvG~G~~G~~~A~~L~~~g~~v~viE~~~~ 39 (232)
.+|.|||.|..|..+|..|++.|++|+++++.+.
T Consensus 22 ~~I~iIG~G~mG~~~A~~l~~~G~~V~~~dr~~~ 55 (310)
T 3doj_A 22 MEVGFLGLGIMGKAMSMNLLKNGFKVTVWNRTLS 55 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSGG
T ss_pred CEEEEECccHHHHHHHHHHHHCCCeEEEEeCCHH
Confidence 4799999999999999999999999999998764
No 373
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=96.38 E-value=0.0041 Score=47.91 Aligned_cols=32 Identities=28% Similarity=0.414 Sum_probs=29.4
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCcEEEEecCC
Q 044609 6 EDVVIIGAGIAGLATAVALRRLGIKALVLEKSD 38 (232)
Q Consensus 6 ~dV~IvG~G~~G~~~A~~L~~~g~~v~viE~~~ 38 (232)
.+|.|||+|..|.++|..|++.|++|+++ +++
T Consensus 20 ~kI~IiGaGa~G~~~a~~L~~~G~~V~l~-~~~ 51 (318)
T 3hwr_A 20 MKVAIMGAGAVGCYYGGMLARAGHEVILI-ARP 51 (318)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCEEEEE-CCH
T ss_pred CcEEEECcCHHHHHHHHHHHHCCCeEEEE-EcH
Confidence 57999999999999999999999999999 653
No 374
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=96.37 E-value=0.013 Score=47.98 Aligned_cols=58 Identities=12% Similarity=0.013 Sum_probs=43.4
Q ss_pred HHHhhhCCCCeEEeCceEEEEEecCCCCCccEEEEeCCCcEEEccEEEecCCCchh--hhhhhcCC
Q 044609 112 EALADELPDDTIQFSSKIAAIDSQTLNGSSAAIINLGDSTIIKAKVLIGCDGVHSM--VAQWLGLS 175 (232)
Q Consensus 112 ~~l~~~~~~~~i~~~~~v~~i~~~~~~g~~~~~v~~~~g~~~~a~~vV~A~G~~S~--~r~~~~~~ 175 (232)
+.+.+. |++++.+++|+++..+ +.. ..+.+.+|+++.||.||.|.|..+. +.+.++..
T Consensus 265 ~~l~~~--GV~v~~~~~v~~i~~~---~~v-~~v~~~~g~~i~aD~Vv~a~G~~p~~~l~~~~g~~ 324 (493)
T 1y56_A 265 QELERW--GIDYVHIPNVKRVEGN---EKV-ERVIDMNNHEYKVDALIFADGRRPDINPITQAGGK 324 (493)
T ss_dssp HHHHHH--TCEEEECSSEEEEECS---SSC-CEEEETTCCEEECSEEEECCCEEECCHHHHHTTCC
T ss_pred HHHHhC--CcEEEeCCeeEEEecC---Cce-EEEEeCCCeEEEeCEEEECCCcCcCchHHHhcCCC
Confidence 444443 8999999999999864 233 5567888989999999999998864 44555543
No 375
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=96.35 E-value=0.0028 Score=48.36 Aligned_cols=37 Identities=22% Similarity=0.363 Sum_probs=29.0
Q ss_pred ccccEEEECCCHHHHHHHHHHHhCCCcEEEEecCCCC
Q 044609 4 VEEDVVIIGAGIAGLATAVALRRLGIKALVLEKSDGL 40 (232)
Q Consensus 4 ~~~dV~IvG~G~~G~~~A~~L~~~g~~v~viE~~~~~ 40 (232)
|..+|-+||-|..|..+|..|.++|++|++++|.+..
T Consensus 4 Ms~kIgfIGLG~MG~~mA~~L~~~G~~V~v~dr~~~~ 40 (297)
T 4gbj_A 4 MSEKIAFLGLGNLGTPIAEILLEAGYELVVWNRTASK 40 (297)
T ss_dssp CCCEEEEECCSTTHHHHHHHHHHTTCEEEEC------
T ss_pred CCCcEEEEecHHHHHHHHHHHHHCCCeEEEEeCCHHH
Confidence 3457999999999999999999999999999987653
No 376
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=96.34 E-value=0.004 Score=49.90 Aligned_cols=33 Identities=21% Similarity=0.425 Sum_probs=30.4
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCcEEEEecCCC
Q 044609 6 EDVVIIGAGIAGLATAVALRRLGIKALVLEKSDG 39 (232)
Q Consensus 6 ~dV~IvG~G~~G~~~A~~L~~~g~~v~viE~~~~ 39 (232)
.+|.|||+|..|+.+|..|++ |++|+++|+++.
T Consensus 37 mkIaVIGlG~mG~~lA~~La~-G~~V~~~D~~~~ 69 (432)
T 3pid_A 37 MKITISGTGYVGLSNGVLIAQ-NHEVVALDIVQA 69 (432)
T ss_dssp CEEEEECCSHHHHHHHHHHHT-TSEEEEECSCHH
T ss_pred CEEEEECcCHHHHHHHHHHHc-CCeEEEEecCHH
Confidence 479999999999999999998 999999998754
No 377
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=96.34 E-value=0.0046 Score=48.44 Aligned_cols=34 Identities=24% Similarity=0.329 Sum_probs=31.6
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCcEEEEecCCC
Q 044609 6 EDVVIIGAGIAGLATAVALRRLGIKALVLEKSDG 39 (232)
Q Consensus 6 ~dV~IvG~G~~G~~~A~~L~~~g~~v~viE~~~~ 39 (232)
.+|.|||.|..|..+|..|++.|++|+++++.+.
T Consensus 23 mkIgiIGlG~mG~~~A~~L~~~G~~V~v~dr~~~ 56 (358)
T 4e21_A 23 MQIGMIGLGRMGADMVRRLRKGGHECVVYDLNVN 56 (358)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHH
T ss_pred CEEEEECchHHHHHHHHHHHhCCCEEEEEeCCHH
Confidence 5899999999999999999999999999998753
No 378
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=96.34 E-value=0.0041 Score=46.38 Aligned_cols=35 Identities=17% Similarity=0.120 Sum_probs=31.4
Q ss_pred ccEEEECCCHHHHHHHHHHHhCC----CcEEEEecCCCC
Q 044609 6 EDVVIIGAGIAGLATAVALRRLG----IKALVLEKSDGL 40 (232)
Q Consensus 6 ~dV~IvG~G~~G~~~A~~L~~~g----~~v~viE~~~~~ 40 (232)
.+|.|||+|..|.++|..|++.| .+|.++++.+..
T Consensus 5 m~i~iiG~G~mG~~~a~~l~~~g~~~~~~v~~~~~~~~~ 43 (262)
T 2rcy_A 5 IKLGFMGLGQMGSALAHGIANANIIKKENLFYYGPSKKN 43 (262)
T ss_dssp SCEEEECCSHHHHHHHHHHHHHTSSCGGGEEEECSSCCS
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCCCCCeEEEEeCCccc
Confidence 47999999999999999999999 699999987654
No 379
>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*
Probab=96.32 E-value=0.0044 Score=47.72 Aligned_cols=38 Identities=32% Similarity=0.545 Sum_probs=32.1
Q ss_pred CCccc-ccEEEECCCHHHHHHHHHHHhCCC--cEEEEecCC
Q 044609 1 MEMVE-EDVVIIGAGIAGLATAVALRRLGI--KALVLEKSD 38 (232)
Q Consensus 1 m~~~~-~dV~IvG~G~~G~~~A~~L~~~g~--~v~viE~~~ 38 (232)
|+.+. .+|+|||+|..|.++|..|+.+++ ++.++|.++
T Consensus 1 m~~~~~~kI~IIGaG~vG~sla~~l~~~~~~~ev~l~Di~~ 41 (316)
T 1ldn_A 1 MKNNGGARVVVIGAGFVGASYVFALMNQGIADEIVLIDANE 41 (316)
T ss_dssp CTTTTSCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSH
T ss_pred CCCCCCCEEEEECcCHHHHHHHHHHHhCCCCCEEEEEeCCc
Confidence 55433 589999999999999999998875 799999864
No 380
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=96.32 E-value=0.0016 Score=43.91 Aligned_cols=33 Identities=15% Similarity=0.222 Sum_probs=30.4
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCcEEEEecCC
Q 044609 6 EDVVIIGAGIAGLATAVALRRLGIKALVLEKSD 38 (232)
Q Consensus 6 ~dV~IvG~G~~G~~~A~~L~~~g~~v~viE~~~ 38 (232)
..|+|||+|..|..+|..|.+.|.+|+++++.+
T Consensus 22 ~~v~iiG~G~iG~~~a~~l~~~g~~v~v~~r~~ 54 (144)
T 3oj0_A 22 NKILLVGNGMLASEIAPYFSYPQYKVTVAGRNI 54 (144)
T ss_dssp CEEEEECCSHHHHHHGGGCCTTTCEEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEcCCH
Confidence 579999999999999999999999999999865
No 381
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=96.32 E-value=0.0051 Score=47.19 Aligned_cols=33 Identities=30% Similarity=0.513 Sum_probs=29.9
Q ss_pred cEEEECCCHHHHHHHHHHHhC--CCcEEEEecCCC
Q 044609 7 DVVIIGAGIAGLATAVALRRL--GIKALVLEKSDG 39 (232)
Q Consensus 7 dV~IvG~G~~G~~~A~~L~~~--g~~v~viE~~~~ 39 (232)
+|+|||+|..|.++|..|++. |.+|+++|+++.
T Consensus 2 kI~VIGaG~vG~~la~~la~~~~g~~V~l~D~~~~ 36 (310)
T 1guz_A 2 KITVIGAGNVGATTAFRLAEKQLARELVLLDVVEG 36 (310)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSSS
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChh
Confidence 599999999999999999985 789999999764
No 382
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=96.31 E-value=0.0047 Score=47.66 Aligned_cols=34 Identities=26% Similarity=0.254 Sum_probs=31.1
Q ss_pred ccEEEECCCHHHHHHHHHHHhCC----CcEEEEecCCC
Q 044609 6 EDVVIIGAGIAGLATAVALRRLG----IKALVLEKSDG 39 (232)
Q Consensus 6 ~dV~IvG~G~~G~~~A~~L~~~g----~~v~viE~~~~ 39 (232)
.+|.|||+|..|.++|..|.+.| ++|++++|.+.
T Consensus 23 mkI~iIG~G~mG~ala~~L~~~G~~~~~~V~v~~r~~~ 60 (322)
T 2izz_A 23 MSVGFIGAGQLAFALAKGFTAAGVLAAHKIMASSPDMD 60 (322)
T ss_dssp CCEEEESCSHHHHHHHHHHHHTTSSCGGGEEEECSCTT
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCCCcceEEEECCCcc
Confidence 47999999999999999999999 79999998764
No 383
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=96.29 E-value=0.0037 Score=50.40 Aligned_cols=32 Identities=25% Similarity=0.361 Sum_probs=30.2
Q ss_pred cEEEECCCHHHHHHHHHHHhCCCcEEEEecCC
Q 044609 7 DVVIIGAGIAGLATAVALRRLGIKALVLEKSD 38 (232)
Q Consensus 7 dV~IvG~G~~G~~~A~~L~~~g~~v~viE~~~ 38 (232)
+|.|||+|..|+.+|..|++.|++|+++|+++
T Consensus 2 kI~VIG~G~vG~~~A~~la~~G~~V~~~d~~~ 33 (436)
T 1mv8_A 2 RISIFGLGYVGAVCAGCLSARGHEVIGVDVSS 33 (436)
T ss_dssp EEEEECCSTTHHHHHHHHHHTTCEEEEECSCH
T ss_pred EEEEECCCHHHHHHHHHHHHCCCEEEEEECCH
Confidence 59999999999999999999999999999865
No 384
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=96.28 E-value=0.0041 Score=47.35 Aligned_cols=34 Identities=26% Similarity=0.376 Sum_probs=31.0
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCcEEEEecCCC
Q 044609 6 EDVVIIGAGIAGLATAVALRRLGIKALVLEKSDG 39 (232)
Q Consensus 6 ~dV~IvG~G~~G~~~A~~L~~~g~~v~viE~~~~ 39 (232)
.+|.|||+|..|..+|..|++.|++|.++++.+.
T Consensus 6 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~~ 39 (299)
T 1vpd_A 6 MKVGFIGLGIMGKPMSKNLLKAGYSLVVSDRNPE 39 (299)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSCHH
T ss_pred ceEEEECchHHHHHHHHHHHhCCCEEEEEeCCHH
Confidence 4799999999999999999999999999998653
No 385
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*
Probab=96.27 E-value=0.0043 Score=47.78 Aligned_cols=35 Identities=26% Similarity=0.438 Sum_probs=30.6
Q ss_pred ccccEEEECCCHHHHHHHHHHHhCCC--cEEEEecCC
Q 044609 4 VEEDVVIIGAGIAGLATAVALRRLGI--KALVLEKSD 38 (232)
Q Consensus 4 ~~~dV~IvG~G~~G~~~A~~L~~~g~--~v~viE~~~ 38 (232)
+..+|+|||+|..|.++|..|+.+++ ++.++|.++
T Consensus 5 ~~~KI~IIGaG~vG~~la~~l~~~~~~~ei~L~Di~~ 41 (317)
T 3d0o_A 5 KGNKVVLIGNGAVGSSYAFSLVNQSIVDELVIIDLDT 41 (317)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHCSCSEEEEECSCH
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 44689999999999999999998885 799999753
No 386
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=96.27 E-value=0.0065 Score=43.95 Aligned_cols=33 Identities=27% Similarity=0.291 Sum_probs=30.7
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCcEEEEecCC
Q 044609 6 EDVVIIGAGIAGLATAVALRRLGIKALVLEKSD 38 (232)
Q Consensus 6 ~dV~IvG~G~~G~~~A~~L~~~g~~v~viE~~~ 38 (232)
.+|.|||+|..|..+|..|++.|++|.+++|+.
T Consensus 29 ~~I~iiG~G~~G~~la~~l~~~g~~V~~~~r~~ 61 (215)
T 2vns_A 29 PKVGILGSGDFARSLATRLVGSGFKVVVGSRNP 61 (215)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSH
T ss_pred CEEEEEccCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 479999999999999999999999999999874
No 387
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=96.26 E-value=0.0065 Score=46.31 Aligned_cols=34 Identities=32% Similarity=0.403 Sum_probs=31.1
Q ss_pred ccEEEEC-CCHHHHHHHHHHHhCCCcEEEEecCCC
Q 044609 6 EDVVIIG-AGIAGLATAVALRRLGIKALVLEKSDG 39 (232)
Q Consensus 6 ~dV~IvG-~G~~G~~~A~~L~~~g~~v~viE~~~~ 39 (232)
..|.||| +|..|.++|..|++.|++|.++++++.
T Consensus 22 ~~I~iIGg~G~mG~~la~~l~~~G~~V~~~~~~~~ 56 (298)
T 2pv7_A 22 HKIVIVGGYGKLGGLFARYLRASGYPISILDREDW 56 (298)
T ss_dssp CCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTCG
T ss_pred CEEEEEcCCCHHHHHHHHHHHhCCCeEEEEECCcc
Confidence 3799999 999999999999999999999998653
No 388
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=96.25 E-value=0.0059 Score=49.75 Aligned_cols=34 Identities=15% Similarity=0.366 Sum_probs=31.8
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCcEEEEecCCC
Q 044609 6 EDVVIIGAGIAGLATAVALRRLGIKALVLEKSDG 39 (232)
Q Consensus 6 ~dV~IvG~G~~G~~~A~~L~~~g~~v~viE~~~~ 39 (232)
.+|.|||.|..|..+|..|+++|++|+++++.+.
T Consensus 5 ~kIgiIGlG~MG~~lA~~L~~~G~~V~v~dr~~~ 38 (484)
T 4gwg_A 5 ADIALIGLAVMGQNLILNMNDHGFVVCAFNRTVS 38 (484)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCEEEECSSTH
T ss_pred CEEEEEChhHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 4799999999999999999999999999998764
No 389
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*
Probab=96.25 E-value=0.0025 Score=49.84 Aligned_cols=34 Identities=21% Similarity=0.210 Sum_probs=31.3
Q ss_pred ccEEEECCCHHHHHHHHHHHhCC-------CcEEEEecCCC
Q 044609 6 EDVVIIGAGIAGLATAVALRRLG-------IKALVLEKSDG 39 (232)
Q Consensus 6 ~dV~IvG~G~~G~~~A~~L~~~g-------~~v~viE~~~~ 39 (232)
.+|.|||+|..|.++|..|++.| ++|+++++++.
T Consensus 9 mkI~iIG~G~mG~~~a~~l~~~g~~~~~~~~~V~~~~r~~~ 49 (354)
T 1x0v_A 9 KKVCIVGSGNWGSAIAKIVGGNAAQLAQFDPRVTMWVFEED 49 (354)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHCTTEEEEEEEECCCCB
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCcccCCCCeEEEEEcChh
Confidence 47999999999999999999998 89999998765
No 390
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=96.23 E-value=0.0083 Score=48.70 Aligned_cols=36 Identities=22% Similarity=0.452 Sum_probs=33.0
Q ss_pred cccEEEECCCHHHHHHHHHHHhCCCcEEEEecCCCC
Q 044609 5 EEDVVIIGAGIAGLATAVALRRLGIKALVLEKSDGL 40 (232)
Q Consensus 5 ~~dV~IvG~G~~G~~~A~~L~~~g~~v~viE~~~~~ 40 (232)
..+++|||+|+.|+-+|..|++.|.+|+++++.+.+
T Consensus 170 ~~~v~ViGgG~~g~e~A~~l~~~g~~Vt~v~~~~~~ 205 (463)
T 4dna_A 170 PESILIAGGGYIAVEFANIFHGLGVKTTLIYRGKEI 205 (463)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCeEEEEEcCCcc
Confidence 358999999999999999999999999999998754
No 391
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=96.23 E-value=0.0039 Score=49.01 Aligned_cols=34 Identities=26% Similarity=0.512 Sum_probs=31.5
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCcEEEEecCCC
Q 044609 6 EDVVIIGAGIAGLATAVALRRLGIKALVLEKSDG 39 (232)
Q Consensus 6 ~dV~IvG~G~~G~~~A~~L~~~g~~v~viE~~~~ 39 (232)
..|+|||+|.+|+.+|..|...|.+|+++|+.+.
T Consensus 185 ~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~~ 218 (381)
T 3p2y_A 185 ASALVLGVGVAGLQALATAKRLGAKTTGYDVRPE 218 (381)
T ss_dssp CEEEEESCSHHHHHHHHHHHHHTCEEEEECSSGG
T ss_pred CEEEEECchHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 5899999999999999999999999999998764
No 392
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=96.23 E-value=0.0036 Score=47.43 Aligned_cols=34 Identities=26% Similarity=0.355 Sum_probs=31.5
Q ss_pred cEEEECCCHHHHHHHHHHHhCCCcEEEEecCCCC
Q 044609 7 DVVIIGAGIAGLATAVALRRLGIKALVLEKSDGL 40 (232)
Q Consensus 7 dV~IvG~G~~G~~~A~~L~~~g~~v~viE~~~~~ 40 (232)
+|.|||.|..|..+|..|++.|++|+++++++..
T Consensus 3 ~I~iiG~G~mG~~~a~~l~~~G~~V~~~dr~~~~ 36 (287)
T 3pdu_A 3 TYGFLGLGIMGGPMAANLVRAGFDVTVWNRNPAK 36 (287)
T ss_dssp CEEEECCSTTHHHHHHHHHHHTCCEEEECSSGGG
T ss_pred eEEEEccCHHHHHHHHHHHHCCCeEEEEcCCHHH
Confidence 6999999999999999999999999999987653
No 393
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=96.21 E-value=0.005 Score=46.90 Aligned_cols=38 Identities=24% Similarity=0.396 Sum_probs=31.6
Q ss_pred CCcccccEEEECCCHHHHHHHHHHHhCCCcEEEEecCCC
Q 044609 1 MEMVEEDVVIIGAGIAGLATAVALRRLGIKALVLEKSDG 39 (232)
Q Consensus 1 m~~~~~dV~IvG~G~~G~~~A~~L~~~g~~v~viE~~~~ 39 (232)
|. +..+|.|||+|..|..+|..|++.|++|+++++.+.
T Consensus 1 M~-~~~~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~~ 38 (301)
T 3cky_A 1 ME-KSIKIGFIGLGAMGKPMAINLLKEGVTVYAFDLMEA 38 (301)
T ss_dssp ----CCEEEEECCCTTHHHHHHHHHHTTCEEEEECSSHH
T ss_pred CC-CCCEEEEECccHHHHHHHHHHHHCCCeEEEEeCCHH
Confidence 44 335799999999999999999999999999998653
No 394
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=96.20 E-value=0.0047 Score=49.64 Aligned_cols=34 Identities=21% Similarity=0.429 Sum_probs=31.4
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCcEEEEecCCC
Q 044609 6 EDVVIIGAGIAGLATAVALRRLGIKALVLEKSDG 39 (232)
Q Consensus 6 ~dV~IvG~G~~G~~~A~~L~~~g~~v~viE~~~~ 39 (232)
..|.|||.|-.|+.+|..|+++|++|+.+|-++.
T Consensus 22 ~~IaViGlGYVGLp~A~~~A~~G~~V~g~Did~~ 55 (444)
T 3vtf_A 22 ASLSVLGLGYVGVVHAVGFALLGHRVVGYDVNPS 55 (444)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCEEEEECSCHH
T ss_pred CEEEEEccCHHHHHHHHHHHhCCCcEEEEECCHH
Confidence 4799999999999999999999999999998753
No 395
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=96.16 E-value=0.0058 Score=47.13 Aligned_cols=34 Identities=24% Similarity=0.398 Sum_probs=31.4
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCcEEEEecCCC
Q 044609 6 EDVVIIGAGIAGLATAVALRRLGIKALVLEKSDG 39 (232)
Q Consensus 6 ~dV~IvG~G~~G~~~A~~L~~~g~~v~viE~~~~ 39 (232)
.+|.|||.|..|..+|..|++.|++|+++++.+.
T Consensus 32 ~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~~ 65 (320)
T 4dll_A 32 RKITFLGTGSMGLPMARRLCEAGYALQVWNRTPA 65 (320)
T ss_dssp SEEEEECCTTTHHHHHHHHHHTTCEEEEECSCHH
T ss_pred CEEEEECccHHHHHHHHHHHhCCCeEEEEcCCHH
Confidence 4799999999999999999999999999998754
No 396
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=96.13 E-value=0.0049 Score=47.69 Aligned_cols=30 Identities=33% Similarity=0.370 Sum_probs=28.8
Q ss_pred cEEEECCCHHHHHHHHHHHhCCCcEEEEec
Q 044609 7 DVVIIGAGIAGLATAVALRRLGIKALVLEK 36 (232)
Q Consensus 7 dV~IvG~G~~G~~~A~~L~~~g~~v~viE~ 36 (232)
+|.|||+|..|..+|..|++.|++|+++++
T Consensus 2 ~I~iiG~G~mG~~~a~~L~~~g~~V~~~~r 31 (335)
T 1txg_A 2 IVSILGAGAMGSALSVPLVDNGNEVRIWGT 31 (335)
T ss_dssp EEEEESCCHHHHHHHHHHHHHCCEEEEECC
T ss_pred EEEEECcCHHHHHHHHHHHhCCCeEEEEEc
Confidence 599999999999999999999999999998
No 397
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=96.11 E-value=0.0046 Score=50.34 Aligned_cols=34 Identities=24% Similarity=0.470 Sum_probs=30.9
Q ss_pred ccEEEECCCHHHHHHHHHHHhC--CCcEEEEecCCC
Q 044609 6 EDVVIIGAGIAGLATAVALRRL--GIKALVLEKSDG 39 (232)
Q Consensus 6 ~dV~IvG~G~~G~~~A~~L~~~--g~~v~viE~~~~ 39 (232)
.+|.|||+|..|+.+|..|++. |++|+++|+++.
T Consensus 6 mkI~VIG~G~mG~~lA~~La~~g~G~~V~~~d~~~~ 41 (467)
T 2q3e_A 6 KKICCIGAGYVGGPTCSVIAHMCPEIRVTVVDVNES 41 (467)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCHH
T ss_pred cEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCHH
Confidence 4799999999999999999998 899999998753
No 398
>4ffl_A PYLC; amino acid, biosynthesis of pyrrolysine, isopeptide bond for ATP-grAsp fold, ligase, ATP-binding, L-lysine and 3R-methyl ornithine; HET: LYS ADP ATP; 1.50A {Methanosarcina barkeri} PDB: 4ffm_A* 4ffn_A* 4ffo_A* 4ffp_A* 4ffr_A*
Probab=96.11 E-value=0.0086 Score=46.94 Aligned_cols=33 Identities=18% Similarity=0.525 Sum_probs=30.6
Q ss_pred cEEEECCCHHHHHHHHHHHhCCCcEEEEecCCC
Q 044609 7 DVVIIGAGIAGLATAVALRRLGIKALVLEKSDG 39 (232)
Q Consensus 7 dV~IvG~G~~G~~~A~~L~~~g~~v~viE~~~~ 39 (232)
.|+|+|||..|..+|..+.+.|++|+++|.++.
T Consensus 3 ~I~ilGgg~~g~~~~~~Ak~~G~~vv~vd~~~~ 35 (363)
T 4ffl_A 3 TICLVGGKLQGFEAAYLSKKAGMKVVLVDKNPQ 35 (363)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEEESCTT
T ss_pred EEEEECCCHHHHHHHHHHHHCCCEEEEEeCCCC
Confidence 699999999999999999999999999998764
No 399
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=96.10 E-value=0.0083 Score=44.36 Aligned_cols=34 Identities=18% Similarity=0.306 Sum_probs=30.9
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCC----cEEEEecCCC
Q 044609 6 EDVVIIGAGIAGLATAVALRRLGI----KALVLEKSDG 39 (232)
Q Consensus 6 ~dV~IvG~G~~G~~~A~~L~~~g~----~v~viE~~~~ 39 (232)
.+|.|||+|..|.++|..|.+.|+ +|.+++|++.
T Consensus 3 ~~i~iIG~G~mG~~~a~~l~~~g~~~~~~V~~~~r~~~ 40 (247)
T 3gt0_A 3 KQIGFIGCGNMGMAMIGGMINKNIVSSNQIICSDLNTA 40 (247)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTSSCGGGEEEECSCHH
T ss_pred CeEEEECccHHHHHHHHHHHhCCCCCCCeEEEEeCCHH
Confidence 369999999999999999999998 9999998753
No 400
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=96.08 E-value=0.0082 Score=46.40 Aligned_cols=34 Identities=18% Similarity=0.157 Sum_probs=30.8
Q ss_pred ccEEEECCCHHHHH-HHHHHHhCCCcEEEEecCCC
Q 044609 6 EDVVIIGAGIAGLA-TAVALRRLGIKALVLEKSDG 39 (232)
Q Consensus 6 ~dV~IvG~G~~G~~-~A~~L~~~g~~v~viE~~~~ 39 (232)
..|.|||.|.+|++ +|..|.++|++|.+.|+...
T Consensus 5 ~~i~~iGiGg~Gms~~A~~L~~~G~~V~~~D~~~~ 39 (326)
T 3eag_A 5 KHIHIIGIGGTFMGGLAAIAKEAGFEVSGCDAKMY 39 (326)
T ss_dssp CEEEEESCCSHHHHHHHHHHHHTTCEEEEEESSCC
T ss_pred cEEEEEEECHHHHHHHHHHHHhCCCEEEEEcCCCC
Confidence 37999999999996 89999999999999998764
No 401
>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*
Probab=96.06 E-value=0.011 Score=49.41 Aligned_cols=58 Identities=21% Similarity=0.293 Sum_probs=41.5
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCcEEEEecCCCCcCcc-eeeeecccHHHHHHHcCCh
Q 044609 6 EDVVIIGAGIAGLATAVALRRLGIKALVLEKSDGLRATG-AALTLSPNAWLALDALGVS 63 (232)
Q Consensus 6 ~dV~IvG~G~~G~~~A~~L~~~g~~v~viE~~~~~~~~~-~~~~~~~~~~~~l~~~g~~ 63 (232)
..|+|+|+|..|..+|..|.+.|++|+++|+++.....- ..+.-.....+.|++.|+.
T Consensus 349 ~~viIiG~G~~G~~la~~L~~~g~~v~vid~d~~~~~~~~~~i~gD~t~~~~L~~agi~ 407 (565)
T 4gx0_A 349 ELIFIIGHGRIGCAAAAFLDRKPVPFILIDRQESPVCNDHVVVYGDATVGQTLRQAGID 407 (565)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSCCSSCCSSCEEESCSSSSTHHHHHTTT
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCCEEEEECChHHHhhcCCEEEeCCCCHHHHHhcCcc
Confidence 479999999999999999999999999999998653221 1122222334556666543
No 402
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=96.04 E-value=0.0059 Score=47.04 Aligned_cols=32 Identities=28% Similarity=0.466 Sum_probs=29.8
Q ss_pred cEEEECCCHHHHHHHHHHHhCCC--cEEEEecCC
Q 044609 7 DVVIIGAGIAGLATAVALRRLGI--KALVLEKSD 38 (232)
Q Consensus 7 dV~IvG~G~~G~~~A~~L~~~g~--~v~viE~~~ 38 (232)
+|.|||+|..|.++|..|++.|+ +|+++|+++
T Consensus 2 kI~VIGaG~~G~~la~~l~~~g~~~~V~l~D~~~ 35 (319)
T 1a5z_A 2 KIGIVGLGRVGSSTAFALLMKGFAREMVLIDVDK 35 (319)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCeEEEEeCCh
Confidence 59999999999999999999998 999999864
No 403
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=96.03 E-value=0.0086 Score=48.81 Aligned_cols=33 Identities=12% Similarity=0.342 Sum_probs=31.0
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCcEEEEecCC
Q 044609 6 EDVVIIGAGIAGLATAVALRRLGIKALVLEKSD 38 (232)
Q Consensus 6 ~dV~IvG~G~~G~~~A~~L~~~g~~v~viE~~~ 38 (232)
.+|.|||+|..|..+|..|++.|++|.+++|.+
T Consensus 6 ~~IgvIG~G~mG~~lA~~L~~~G~~V~v~dr~~ 38 (474)
T 2iz1_A 6 ANFGVVGMAVMGKNLALNVESRGYTVAIYNRTT 38 (474)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred CcEEEEeeHHHHHHHHHHHHhCCCEEEEEcCCH
Confidence 579999999999999999999999999999864
No 404
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=96.03 E-value=0.0066 Score=46.32 Aligned_cols=33 Identities=24% Similarity=0.351 Sum_probs=30.8
Q ss_pred cEEEECCCHHHHHHHHHHHhCCCcEEEEecCCC
Q 044609 7 DVVIIGAGIAGLATAVALRRLGIKALVLEKSDG 39 (232)
Q Consensus 7 dV~IvG~G~~G~~~A~~L~~~g~~v~viE~~~~ 39 (232)
+|.|||+|..|..+|..|++.|++|+++++++.
T Consensus 5 ~I~iiG~G~mG~~~a~~l~~~G~~V~~~d~~~~ 37 (302)
T 2h78_A 5 QIAFIGLGHMGAPMATNLLKAGYLLNVFDLVQS 37 (302)
T ss_dssp EEEEECCSTTHHHHHHHHHHTTCEEEEECSSHH
T ss_pred EEEEEeecHHHHHHHHHHHhCCCeEEEEcCCHH
Confidence 699999999999999999999999999998753
No 405
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=96.02 E-value=0.0068 Score=45.95 Aligned_cols=35 Identities=37% Similarity=0.456 Sum_probs=31.5
Q ss_pred cccEEEECCCHHHHHHHHHHHhCCC-cEEEEecCCC
Q 044609 5 EEDVVIIGAGIAGLATAVALRRLGI-KALVLEKSDG 39 (232)
Q Consensus 5 ~~dV~IvG~G~~G~~~A~~L~~~g~-~v~viE~~~~ 39 (232)
...|+|||+|-.|..+|..|++.|+ +++|+|.+.-
T Consensus 36 ~~~VlVvGaGGlGs~va~~La~aGVG~i~lvD~D~V 71 (292)
T 3h8v_A 36 TFAVAIVGVGGVGSVTAEMLTRCGIGKLLLFDYDKV 71 (292)
T ss_dssp GCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCBC
T ss_pred CCeEEEECcCHHHHHHHHHHHHcCCCEEEEECCCcc
Confidence 4689999999999999999999998 7899998753
No 406
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=96.01 E-value=0.0072 Score=48.14 Aligned_cols=34 Identities=35% Similarity=0.523 Sum_probs=31.3
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCcEEEEecCCC
Q 044609 6 EDVVIIGAGIAGLATAVALRRLGIKALVLEKSDG 39 (232)
Q Consensus 6 ~dV~IvG~G~~G~~~A~~L~~~g~~v~viE~~~~ 39 (232)
..|+|+|+|.+|+.+|..+...|.+|+++|+.+.
T Consensus 173 ~~V~ViGaG~iG~~aa~~a~~~Ga~V~v~D~~~~ 206 (401)
T 1x13_A 173 AKVMVIGAGVAGLAAIGAANSLGAIVRAFDTRPE 206 (401)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCGG
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHH
Confidence 5799999999999999999999999999998754
No 407
>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum}
Probab=95.99 E-value=0.0058 Score=48.23 Aligned_cols=33 Identities=12% Similarity=0.106 Sum_probs=30.9
Q ss_pred cEEEECCCHHHHHHHHHHHhCC-------CcEEEEecCCC
Q 044609 7 DVVIIGAGIAGLATAVALRRLG-------IKALVLEKSDG 39 (232)
Q Consensus 7 dV~IvG~G~~G~~~A~~L~~~g-------~~v~viE~~~~ 39 (232)
+|.|||+|..|.++|..|++.| ++|+++++.+.
T Consensus 23 kI~iIGaG~mG~alA~~L~~~G~~~~~~~~~V~~~~r~~~ 62 (375)
T 1yj8_A 23 KISILGSGNWASAISKVVGTNAKNNYLFENEVRMWIRDEF 62 (375)
T ss_dssp CEEEECCSHHHHHHHHHHHHHHHHCTTBCSCEEEECCSCC
T ss_pred EEEEECcCHHHHHHHHHHHHcCCccCCCCCeEEEEECChh
Confidence 6999999999999999999999 99999998765
No 408
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=95.99 E-value=0.0087 Score=47.38 Aligned_cols=34 Identities=26% Similarity=0.547 Sum_probs=31.3
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCcEEEEecCCC
Q 044609 6 EDVVIIGAGIAGLATAVALRRLGIKALVLEKSDG 39 (232)
Q Consensus 6 ~dV~IvG~G~~G~~~A~~L~~~g~~v~viE~~~~ 39 (232)
..|+|+|+|.+|+.+|..+...|.+|+++|+.+.
T Consensus 173 ~~V~ViGaG~iG~~aa~~a~~~Ga~V~~~d~~~~ 206 (384)
T 1l7d_A 173 ARVLVFGVGVAGLQAIATAKRLGAVVMATDVRAA 206 (384)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCST
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 5899999999999999999999999999998764
No 409
>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*
Probab=95.98 E-value=0.0085 Score=46.32 Aligned_cols=34 Identities=26% Similarity=0.464 Sum_probs=31.0
Q ss_pred cccEEEECCCHHHHHHHHHHHhCCC-cEEEEecCC
Q 044609 5 EEDVVIIGAGIAGLATAVALRRLGI-KALVLEKSD 38 (232)
Q Consensus 5 ~~dV~IvG~G~~G~~~A~~L~~~g~-~v~viE~~~ 38 (232)
...|+|||+|-.|+.+|..|++.|+ +++|+|.+.
T Consensus 34 ~~~VlIvGaGGlGs~va~~La~aGVg~ItlvD~D~ 68 (340)
T 3rui_A 34 NTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNGT 68 (340)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCB
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCEEEEecCCE
Confidence 3689999999999999999999998 788999875
No 410
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=95.96 E-value=0.0099 Score=42.70 Aligned_cols=32 Identities=28% Similarity=0.460 Sum_probs=29.7
Q ss_pred cEEEEC-CCHHHHHHHHHHHhCCCcEEEEecCC
Q 044609 7 DVVIIG-AGIAGLATAVALRRLGIKALVLEKSD 38 (232)
Q Consensus 7 dV~IvG-~G~~G~~~A~~L~~~g~~v~viE~~~ 38 (232)
+|+|+| +|-.|..+|..|++.|++|.+++|++
T Consensus 2 ~i~iiGa~G~~G~~ia~~l~~~g~~V~~~~r~~ 34 (212)
T 1jay_A 2 RVALLGGTGNLGKGLALRLATLGHEIVVGSRRE 34 (212)
T ss_dssp EEEEETTTSHHHHHHHHHHHTTTCEEEEEESSH
T ss_pred eEEEEcCCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 599999 99999999999999999999999864
No 411
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=95.96 E-value=0.0093 Score=44.88 Aligned_cols=32 Identities=25% Similarity=0.440 Sum_probs=29.6
Q ss_pred cEEEECCCHHHHHHHHHHHhCCCcEEEEecCC
Q 044609 7 DVVIIGAGIAGLATAVALRRLGIKALVLEKSD 38 (232)
Q Consensus 7 dV~IvG~G~~G~~~A~~L~~~g~~v~viE~~~ 38 (232)
+|.|||+|..|.++|..|.+.|++|.++++++
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~ 33 (279)
T 2f1k_A 2 KIGVVGLGLIGASLAGDLRRRGHYLIGVSRQQ 33 (279)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred EEEEEcCcHHHHHHHHHHHHCCCEEEEEECCH
Confidence 59999999999999999999999999998764
No 412
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}
Probab=95.94 E-value=0.008 Score=47.24 Aligned_cols=34 Identities=35% Similarity=0.479 Sum_probs=31.4
Q ss_pred cccEEEECCCHHHHHHHHHHHhCCC-cEEEEecCC
Q 044609 5 EEDVVIIGAGIAGLATAVALRRLGI-KALVLEKSD 38 (232)
Q Consensus 5 ~~dV~IvG~G~~G~~~A~~L~~~g~-~v~viE~~~ 38 (232)
+.+|+|+|||.+|..+|..|...|. +|.++|++.
T Consensus 188 d~kVVi~GAGaAG~~iA~ll~~~Ga~~I~v~D~~G 222 (398)
T 2a9f_A 188 EVSIVVNGGGSAGLSITRKLLAAGATKVTVVDKFG 222 (398)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETTE
T ss_pred ccEEEEECCCHHHHHHHHHHHHcCCCeEEEEECCC
Confidence 4689999999999999999999999 999999874
No 413
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=95.93 E-value=0.0096 Score=46.71 Aligned_cols=33 Identities=27% Similarity=0.460 Sum_probs=30.7
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCcEEEEecCC
Q 044609 6 EDVVIIGAGIAGLATAVALRRLGIKALVLEKSD 38 (232)
Q Consensus 6 ~dV~IvG~G~~G~~~A~~L~~~g~~v~viE~~~ 38 (232)
..|+|+|+|.+|+.++..|...|.+|+++++.+
T Consensus 168 ~~VlViGaGgvG~~aa~~a~~~Ga~V~v~dr~~ 200 (361)
T 1pjc_A 168 GKVVILGGGVVGTEAAKMAVGLGAQVQIFDINV 200 (361)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 579999999999999999999999999999864
No 414
>2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A*
Probab=95.92 E-value=0.01 Score=48.55 Aligned_cols=34 Identities=15% Similarity=0.366 Sum_probs=31.2
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCcEEEEecCCC
Q 044609 6 EDVVIIGAGIAGLATAVALRRLGIKALVLEKSDG 39 (232)
Q Consensus 6 ~dV~IvG~G~~G~~~A~~L~~~g~~v~viE~~~~ 39 (232)
.+|.|||+|..|..+|..|++.|++|.+++|.+.
T Consensus 3 m~IgvIG~G~mG~~lA~~La~~G~~V~v~dr~~~ 36 (482)
T 2pgd_A 3 ADIALIGLAVMGQNLILNMNDHGFVVCAFNRTVS 36 (482)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCEEEECSSTH
T ss_pred CeEEEEChHHHHHHHHHHHHHCCCeEEEEeCCHH
Confidence 3699999999999999999999999999998753
No 415
>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A
Probab=95.92 E-value=0.0068 Score=46.92 Aligned_cols=37 Identities=19% Similarity=0.170 Sum_probs=30.9
Q ss_pred CCcccccEEEECC-CHHHHHHHHHHHhCCC-------cEEEEecC
Q 044609 1 MEMVEEDVVIIGA-GIAGLATAVALRRLGI-------KALVLEKS 37 (232)
Q Consensus 1 m~~~~~dV~IvG~-G~~G~~~A~~L~~~g~-------~v~viE~~ 37 (232)
|.++..+|+|+|| |..|.+++..|..+|+ ++.++|..
T Consensus 1 m~~~~~KI~ViGaaG~VG~~l~~~L~~~~~~~~~~~~ev~l~Di~ 45 (329)
T 1b8p_A 1 MAKTPMRVAVTGAAGQICYSLLFRIANGDMLGKDQPVILQLLEIP 45 (329)
T ss_dssp --CCCEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCS
T ss_pred CCCCCCEEEEECCCChHHHHHHHHHHhCCCcCCCCCCEEEEEcCC
Confidence 6544578999998 9999999999999886 79999876
No 416
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=95.92 E-value=0.0065 Score=48.43 Aligned_cols=31 Identities=19% Similarity=0.359 Sum_probs=29.1
Q ss_pred cEEEECCCHHHHHHHHHHHhCCCcEEEEecCC
Q 044609 7 DVVIIGAGIAGLATAVALRRLGIKALVLEKSD 38 (232)
Q Consensus 7 dV~IvG~G~~G~~~A~~L~~~g~~v~viE~~~ 38 (232)
+|.|||+|..|+.+|..|++ |++|+++++++
T Consensus 2 kI~VIG~G~vG~~~A~~La~-G~~V~~~d~~~ 32 (402)
T 1dlj_A 2 KIAVAGSGYVGLSLGVLLSL-QNEVTIVDILP 32 (402)
T ss_dssp EEEEECCSHHHHHHHHHHTT-TSEEEEECSCH
T ss_pred EEEEECCCHHHHHHHHHHhC-CCEEEEEECCH
Confidence 59999999999999999999 99999999865
No 417
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*
Probab=95.91 E-value=0.0076 Score=45.83 Aligned_cols=32 Identities=16% Similarity=0.171 Sum_probs=29.6
Q ss_pred cEEEECCCHHHHHHHHHHHhCCC--cEEEEecCC
Q 044609 7 DVVIIGAGIAGLATAVALRRLGI--KALVLEKSD 38 (232)
Q Consensus 7 dV~IvG~G~~G~~~A~~L~~~g~--~v~viE~~~ 38 (232)
+|.|||+|..|.++|..|++.|+ ++.++|+.+
T Consensus 2 kI~ViGaG~vG~~la~~l~~~~~~~~v~L~D~~~ 35 (294)
T 1oju_A 2 KLGFVGAGRVGSTSAFTCLLNLDVDEIALVDIAE 35 (294)
T ss_dssp EEEEECCSHHHHHHHHHHHHHSCCSEEEEECSSH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCeEEEEECCh
Confidence 59999999999999999999988 899999865
No 418
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=95.90 E-value=0.011 Score=48.04 Aligned_cols=35 Identities=23% Similarity=0.333 Sum_probs=31.4
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCC-cEEEEecCCCC
Q 044609 6 EDVVIIGAGIAGLATAVALRRLGI-KALVLEKSDGL 40 (232)
Q Consensus 6 ~dV~IvG~G~~G~~~A~~L~~~g~-~v~viE~~~~~ 40 (232)
.+|+|||||.+|+-+|..+.+.|. +|+++++.+..
T Consensus 265 k~VvVIGgG~~a~d~A~~~~r~Ga~~Vtiv~r~~~~ 300 (456)
T 2vdc_G 265 KHVVVLGGGDTAMDCVRTAIRQGATSVKCLYRRDRK 300 (456)
T ss_dssp SEEEEECSSHHHHHHHHHHHHTTCSEEEEECSSCST
T ss_pred CEEEEECCChhHHHHHHHHHHcCCCEEEEEEeCCcc
Confidence 589999999999999999999998 59999987654
No 419
>2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana}
Probab=95.90 E-value=0.0081 Score=51.58 Aligned_cols=34 Identities=29% Similarity=0.409 Sum_probs=31.4
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCcEEEEecCCC
Q 044609 6 EDVVIIGAGIAGLATAVALRRLGIKALVLEKSDG 39 (232)
Q Consensus 6 ~dV~IvG~G~~G~~~A~~L~~~g~~v~viE~~~~ 39 (232)
..|.|||+|..|..+|..|++.|++|+++|+++.
T Consensus 313 ~kV~VIGaG~MG~~iA~~la~aG~~V~l~D~~~~ 346 (725)
T 2wtb_A 313 KKVAIIGGGLMGSGIATALILSNYPVILKEVNEK 346 (725)
T ss_dssp CCEEEECCSHHHHHHHHHHHTTTCCEEEECSSHH
T ss_pred cEEEEEcCCHhhHHHHHHHHhCCCEEEEEECCHH
Confidence 3699999999999999999999999999998753
No 420
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=95.89 E-value=0.013 Score=43.96 Aligned_cols=34 Identities=21% Similarity=0.275 Sum_probs=30.9
Q ss_pred cccEEEECCCHHHHHHHHHHHhCCCcEEEEecCC
Q 044609 5 EEDVVIIGAGIAGLATAVALRRLGIKALVLEKSD 38 (232)
Q Consensus 5 ~~dV~IvG~G~~G~~~A~~L~~~g~~v~viE~~~ 38 (232)
...|+|+|+|-+|.++|..|++.|.+|++++|..
T Consensus 119 ~k~vlViGaGg~g~a~a~~L~~~G~~V~v~~R~~ 152 (271)
T 1nyt_A 119 GLRILLIGAGGASRGVLLPLLSLDCAVTITNRTV 152 (271)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSH
T ss_pred CCEEEEECCcHHHHHHHHHHHHcCCEEEEEECCH
Confidence 3579999999999999999999999999998864
No 421
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=95.86 E-value=0.013 Score=43.86 Aligned_cols=34 Identities=32% Similarity=0.551 Sum_probs=31.3
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCcEEEEecCCC
Q 044609 6 EDVVIIGAGIAGLATAVALRRLGIKALVLEKSDG 39 (232)
Q Consensus 6 ~dV~IvG~G~~G~~~A~~L~~~g~~v~viE~~~~ 39 (232)
..++|+|+|-+|.++|..|++.|.+|+|+.|...
T Consensus 119 k~vlvlGaGGaaraia~~L~~~G~~v~V~nRt~~ 152 (269)
T 3phh_A 119 QNALILGAGGSAKALACELKKQGLQVSVLNRSSR 152 (269)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCT
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 4799999999999999999999999999998764
No 422
>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}
Probab=95.85 E-value=0.0092 Score=45.81 Aligned_cols=33 Identities=30% Similarity=0.575 Sum_probs=30.1
Q ss_pred cEEEECCCHHHHHHHHHHHhCCC--cEEEEecCCC
Q 044609 7 DVVIIGAGIAGLATAVALRRLGI--KALVLEKSDG 39 (232)
Q Consensus 7 dV~IvG~G~~G~~~A~~L~~~g~--~v~viE~~~~ 39 (232)
+|.|||+|..|.++|..|+..++ ++.++|..+.
T Consensus 2 kv~ViGaG~vG~~~a~~l~~~~~~~el~l~D~~~~ 36 (314)
T 3nep_X 2 KVTVIGAGNVGATVAECVARQDVAKEVVMVDIKDG 36 (314)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCSSEEEEECSSTT
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCchH
Confidence 59999999999999999999887 8999998764
No 423
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=95.85 E-value=0.0083 Score=45.46 Aligned_cols=33 Identities=27% Similarity=0.464 Sum_probs=29.2
Q ss_pred ccEEEECCCHHHHHHHHHHHhC--CCcEEEEecCC
Q 044609 6 EDVVIIGAGIAGLATAVALRRL--GIKALVLEKSD 38 (232)
Q Consensus 6 ~dV~IvG~G~~G~~~A~~L~~~--g~~v~viE~~~ 38 (232)
.+|.|||+|..|.++|..|++. +.+|.++++++
T Consensus 7 ~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~ 41 (290)
T 3b1f_A 7 KTIYIAGLGLIGASLALGIKRDHPHYKIVGYNRSD 41 (290)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSH
T ss_pred ceEEEEeeCHHHHHHHHHHHhCCCCcEEEEEcCCH
Confidence 4799999999999999999987 67899998764
No 424
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=95.83 E-value=0.014 Score=47.62 Aligned_cols=35 Identities=31% Similarity=0.603 Sum_probs=32.6
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCcEEEEecCCCC
Q 044609 6 EDVVIIGAGIAGLATAVALRRLGIKALVLEKSDGL 40 (232)
Q Consensus 6 ~dV~IvG~G~~G~~~A~~L~~~g~~v~viE~~~~~ 40 (232)
.+|+|||+|+.|+-+|..|++.|.+|+++++.+.+
T Consensus 192 ~~v~ViGgG~~g~e~A~~l~~~g~~Vtli~~~~~~ 226 (484)
T 3o0h_A 192 KSIVIVGGGYIGVEFANIFHGLGVKTTLLHRGDLI 226 (484)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred CcEEEECcCHHHHHHHHHHHHcCCeEEEEECCCcc
Confidence 58999999999999999999999999999998754
No 425
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=95.82 E-value=0.0099 Score=45.12 Aligned_cols=33 Identities=24% Similarity=0.277 Sum_probs=30.5
Q ss_pred cEEEECCCHHHHHHHHHHHhCCCcEEEEecCCC
Q 044609 7 DVVIIGAGIAGLATAVALRRLGIKALVLEKSDG 39 (232)
Q Consensus 7 dV~IvG~G~~G~~~A~~L~~~g~~v~viE~~~~ 39 (232)
+|.|||+|..|..+|..|++.|++|.++++++.
T Consensus 2 ~i~iiG~G~mG~~~a~~l~~~g~~V~~~~~~~~ 34 (296)
T 2gf2_A 2 PVGFIGLGNMGNPMAKNLMKHGYPLIIYDVFPD 34 (296)
T ss_dssp CEEEECCSTTHHHHHHHHHHTTCCEEEECSSTH
T ss_pred eEEEEeccHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 599999999999999999999999999998754
No 426
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=95.82 E-value=0.0091 Score=44.33 Aligned_cols=34 Identities=29% Similarity=0.512 Sum_probs=30.8
Q ss_pred cccEEEECCCHHHHHHHHHHHhCCC-cEEEEecCC
Q 044609 5 EEDVVIIGAGIAGLATAVALRRLGI-KALVLEKSD 38 (232)
Q Consensus 5 ~~dV~IvG~G~~G~~~A~~L~~~g~-~v~viE~~~ 38 (232)
...|+|||+|-.|..+|..|++.|+ +++|+|.+.
T Consensus 28 ~~~VlvvG~GglG~~va~~La~~Gvg~i~lvD~d~ 62 (251)
T 1zud_1 28 DSQVLIIGLGGLGTPAALYLAGAGVGTLVLADDDD 62 (251)
T ss_dssp TCEEEEECCSTTHHHHHHHHHHTTCSEEEEECCCB
T ss_pred cCcEEEEccCHHHHHHHHHHHHcCCCeEEEEeCCC
Confidence 3689999999999999999999998 788999875
No 427
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=95.81 E-value=0.0085 Score=45.95 Aligned_cols=32 Identities=28% Similarity=0.391 Sum_probs=29.6
Q ss_pred cEEEECCCHHHHHHHHHHHhCC--CcEEEEecCC
Q 044609 7 DVVIIGAGIAGLATAVALRRLG--IKALVLEKSD 38 (232)
Q Consensus 7 dV~IvG~G~~G~~~A~~L~~~g--~~v~viE~~~ 38 (232)
+|.|||+|-.|.++|..|+++| .+|+++|+++
T Consensus 3 kI~VIGaG~~G~~la~~L~~~g~~~~V~l~d~~~ 36 (309)
T 1hyh_A 3 KIGIIGLGNVGAAVAHGLIAQGVADDYVFIDANE 36 (309)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEcCCH
Confidence 6999999999999999999999 6899999864
No 428
>3c7a_A Octopine dehydrogenase; L) stereospecific opine dehydrogenas, oxidorecutase, oxidoreductase; HET: NAD; 2.10A {Pecten maximus} PDB: 3c7c_B* 3c7d_B* 3iqd_B*
Probab=95.81 E-value=0.0062 Score=48.53 Aligned_cols=29 Identities=21% Similarity=0.253 Sum_probs=27.6
Q ss_pred cEEEECCCHHHHHHHHHHHh-CCCcEEEEe
Q 044609 7 DVVIIGAGIAGLATAVALRR-LGIKALVLE 35 (232)
Q Consensus 7 dV~IvG~G~~G~~~A~~L~~-~g~~v~viE 35 (232)
+|.|||+|..|.++|..|++ .|++|++++
T Consensus 4 kI~ViGaG~~G~~~a~~La~~~G~~V~~~~ 33 (404)
T 3c7a_A 4 KVCVCGGGNGAHTLSGLAASRDGVEVRVLT 33 (404)
T ss_dssp EEEEECCSHHHHHHHHHHTTSTTEEEEEEC
T ss_pred eEEEECCCHHHHHHHHHHHhCCCCEEEEEe
Confidence 69999999999999999998 599999999
No 429
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=95.80 E-value=0.0099 Score=45.87 Aligned_cols=33 Identities=24% Similarity=0.415 Sum_probs=30.1
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCC--cEEEEecCC
Q 044609 6 EDVVIIGAGIAGLATAVALRRLGI--KALVLEKSD 38 (232)
Q Consensus 6 ~dV~IvG~G~~G~~~A~~L~~~g~--~v~viE~~~ 38 (232)
.+|+|||+|..|.++|..|+..++ ++.++|...
T Consensus 10 ~kV~ViGaG~vG~~~a~~l~~~~~~~el~l~D~~~ 44 (326)
T 3vku_A 10 QKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDIFK 44 (326)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSCH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCeEEEEeCCh
Confidence 589999999999999999999887 899999854
No 430
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=95.80 E-value=0.011 Score=48.04 Aligned_cols=34 Identities=24% Similarity=0.251 Sum_probs=31.4
Q ss_pred cccEEEECCCHHHHHHHHHHHhCCCcEEEEecCC
Q 044609 5 EEDVVIIGAGIAGLATAVALRRLGIKALVLEKSD 38 (232)
Q Consensus 5 ~~dV~IvG~G~~G~~~A~~L~~~g~~v~viE~~~ 38 (232)
...|+|||+|.+|...|..|.+.|.+|+++++..
T Consensus 12 ~~~vlVvGgG~va~~k~~~L~~~ga~V~vi~~~~ 45 (457)
T 1pjq_A 12 DRDCLIVGGGDVAERKARLLLEAGARLTVNALTF 45 (457)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTBEEEEEESSC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCcCEEEEEcCCC
Confidence 4689999999999999999999999999999854
No 431
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=95.79 E-value=0.0072 Score=49.35 Aligned_cols=34 Identities=26% Similarity=0.388 Sum_probs=30.7
Q ss_pred ccEEEECCCHHHHHHHHHHHhC--CCcEEEEecCCC
Q 044609 6 EDVVIIGAGIAGLATAVALRRL--GIKALVLEKSDG 39 (232)
Q Consensus 6 ~dV~IvG~G~~G~~~A~~L~~~--g~~v~viE~~~~ 39 (232)
.+|.|||+|..|+.+|..|++. |++|+++|+++.
T Consensus 10 mkI~VIG~G~vG~~~A~~La~~g~g~~V~~~D~~~~ 45 (481)
T 2o3j_A 10 SKVVCVGAGYVGGPTCAMIAHKCPHITVTVVDMNTA 45 (481)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCHH
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCHH
Confidence 4799999999999999999998 799999998653
No 432
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=95.78 E-value=0.013 Score=44.06 Aligned_cols=32 Identities=34% Similarity=0.520 Sum_probs=29.5
Q ss_pred cEEEECCCHHHHHHHHHHHhCCC--cEEEEecCC
Q 044609 7 DVVIIGAGIAGLATAVALRRLGI--KALVLEKSD 38 (232)
Q Consensus 7 dV~IvG~G~~G~~~A~~L~~~g~--~v~viE~~~ 38 (232)
.|.|||+|..|.++|..|++.|+ +|+++++++
T Consensus 3 ~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~ 36 (281)
T 2g5c_A 3 NVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINP 36 (281)
T ss_dssp EEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCH
T ss_pred EEEEEecCHHHHHHHHHHHhcCCCcEEEEEeCCH
Confidence 59999999999999999999998 899998764
No 433
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=95.77 E-value=0.011 Score=46.31 Aligned_cols=34 Identities=29% Similarity=0.476 Sum_probs=31.2
Q ss_pred ccccEEEECCCHHHHHHHHHHHhCCC-cEEEEecC
Q 044609 4 VEEDVVIIGAGIAGLATAVALRRLGI-KALVLEKS 37 (232)
Q Consensus 4 ~~~dV~IvG~G~~G~~~A~~L~~~g~-~v~viE~~ 37 (232)
.+.+|+|+|||-+|..+|..|...|. +|+++|+.
T Consensus 191 ~~~kVVv~GAGaAG~~iAkll~~~G~~~I~v~Dr~ 225 (388)
T 1vl6_A 191 EEVKVVVNGIGAAGYNIVKFLLDLGVKNVVAVDRK 225 (388)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETT
T ss_pred CCcEEEEECCCHHHHHHHHHHHhCCCCeEEEEECC
Confidence 34689999999999999999999998 79999997
No 434
>1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A*
Probab=95.76 E-value=0.0097 Score=44.32 Aligned_cols=32 Identities=22% Similarity=0.379 Sum_probs=29.6
Q ss_pred cEEEECCCHHHHHHHHHHHhCC-CcEEEEecCC
Q 044609 7 DVVIIGAGIAGLATAVALRRLG-IKALVLEKSD 38 (232)
Q Consensus 7 dV~IvG~G~~G~~~A~~L~~~g-~~v~viE~~~ 38 (232)
+|.|||+|..|..+|..|++.| ++|.++++.+
T Consensus 2 ~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~r~~ 34 (263)
T 1yqg_A 2 NVYFLGGGNMAAAVAGGLVKQGGYRIYIANRGA 34 (263)
T ss_dssp EEEEECCSHHHHHHHHHHHHHCSCEEEEECSSH
T ss_pred EEEEECchHHHHHHHHHHHHCCCCeEEEECCCH
Confidence 4999999999999999999999 9999999864
No 435
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A
Probab=95.76 E-value=0.0095 Score=45.52 Aligned_cols=34 Identities=29% Similarity=0.670 Sum_probs=29.9
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCC--cEEEEecCCC
Q 044609 6 EDVVIIGAGIAGLATAVALRRLGI--KALVLEKSDG 39 (232)
Q Consensus 6 ~dV~IvG~G~~G~~~A~~L~~~g~--~v~viE~~~~ 39 (232)
.+|.|||+|..|..+|..|+.+|+ ++.++|.++.
T Consensus 15 ~kV~ViGaG~vG~~~a~~l~~~g~~~ev~L~Di~~~ 50 (303)
T 2i6t_A 15 NKITVVGGGELGIACTLAISAKGIADRLVLLDLSEG 50 (303)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECCC--
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCCCEEEEEcCCcc
Confidence 579999999999999999999998 9999998763
No 436
>3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A
Probab=95.73 E-value=0.018 Score=45.45 Aligned_cols=35 Identities=31% Similarity=0.516 Sum_probs=31.8
Q ss_pred cccEEEECCCHHHHHHHHHHHhCCCcEEEEecCCC
Q 044609 5 EEDVVIIGAGIAGLATAVALRRLGIKALVLEKSDG 39 (232)
Q Consensus 5 ~~dV~IvG~G~~G~~~A~~L~~~g~~v~viE~~~~ 39 (232)
...|+|+|+|..|..++..+.+.|++|.+++..+.
T Consensus 12 ~~~IlIlG~G~lg~~la~aa~~lG~~viv~d~~~~ 46 (377)
T 3orq_A 12 GATIGIIGGGQLGKMMAQSAQKMGYKVVVLDPSED 46 (377)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCTT
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCC
Confidence 36899999999999999999999999999997654
No 437
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=95.72 E-value=0.0099 Score=43.07 Aligned_cols=38 Identities=29% Similarity=0.414 Sum_probs=31.8
Q ss_pred CCcccccEEEECC-CHHHHHHHHHHHhCCCcEEEEecCCC
Q 044609 1 MEMVEEDVVIIGA-GIAGLATAVALRRLGIKALVLEKSDG 39 (232)
Q Consensus 1 m~~~~~dV~IvG~-G~~G~~~A~~L~~~g~~v~viE~~~~ 39 (232)
|++| ..|+|.|| |..|..++..|.++|++|.++.|.+.
T Consensus 1 M~~m-~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~ 39 (227)
T 3dhn_A 1 MEKV-KKIVLIGASGFVGSALLNEALNRGFEVTAVVRHPE 39 (227)
T ss_dssp --CC-CEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCGG
T ss_pred CCCC-CEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCcc
Confidence 5533 47999996 99999999999999999999999754
No 438
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=95.71 E-value=0.0044 Score=45.39 Aligned_cols=34 Identities=24% Similarity=0.226 Sum_probs=30.4
Q ss_pred cccEEEECCCHHHHHHHHHHHhCCCcEEEEecCCC
Q 044609 5 EEDVVIIGAGIAGLATAVALRRLGIKALVLEKSDG 39 (232)
Q Consensus 5 ~~dV~IvG~G~~G~~~A~~L~~~g~~v~viE~~~~ 39 (232)
...|+|+|+|..|..+|..|.+.|+ |+++|+++.
T Consensus 9 ~~~viI~G~G~~G~~la~~L~~~g~-v~vid~~~~ 42 (234)
T 2aef_A 9 SRHVVICGWSESTLECLRELRGSEV-FVLAEDENV 42 (234)
T ss_dssp -CEEEEESCCHHHHHHHHHSTTSEE-EEEESCGGG
T ss_pred CCEEEEECCChHHHHHHHHHHhCCe-EEEEECCHH
Confidence 3579999999999999999999999 999998764
No 439
>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1
Probab=95.69 E-value=0.012 Score=45.41 Aligned_cols=33 Identities=12% Similarity=0.408 Sum_probs=30.2
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCC--cEEEEecCC
Q 044609 6 EDVVIIGAGIAGLATAVALRRLGI--KALVLEKSD 38 (232)
Q Consensus 6 ~dV~IvG~G~~G~~~A~~L~~~g~--~v~viE~~~ 38 (232)
.+|.|||+|..|.++|..|+.+|+ ++.++|...
T Consensus 22 ~kV~ViGaG~vG~~~a~~la~~g~~~ev~L~Di~~ 56 (330)
T 3ldh_A 22 NKITVVGCDAVGMADAISVLMKDLADEVALVDVME 56 (330)
T ss_dssp CEEEEESTTHHHHHHHHHHHHHCCCSEEEEECSCH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCeEEEEECCH
Confidence 589999999999999999999987 899999854
No 440
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=95.69 E-value=0.012 Score=43.99 Aligned_cols=33 Identities=33% Similarity=0.495 Sum_probs=30.1
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCc-EEEEecCC
Q 044609 6 EDVVIIGAGIAGLATAVALRRLGIK-ALVLEKSD 38 (232)
Q Consensus 6 ~dV~IvG~G~~G~~~A~~L~~~g~~-v~viE~~~ 38 (232)
.+|.|||+|-.|..+|..|++.|++ |.++++.+
T Consensus 11 m~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~~~~ 44 (266)
T 3d1l_A 11 TPIVLIGAGNLATNLAKALYRKGFRIVQVYSRTE 44 (266)
T ss_dssp CCEEEECCSHHHHHHHHHHHHHTCCEEEEECSSH
T ss_pred CeEEEEcCCHHHHHHHHHHHHCCCeEEEEEeCCH
Confidence 5799999999999999999999998 88998764
No 441
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=95.68 E-value=0.014 Score=45.97 Aligned_cols=33 Identities=27% Similarity=0.473 Sum_probs=30.8
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCcEEEEecCC
Q 044609 6 EDVVIIGAGIAGLATAVALRRLGIKALVLEKSD 38 (232)
Q Consensus 6 ~dV~IvG~G~~G~~~A~~L~~~g~~v~viE~~~ 38 (232)
..|+|+|+|..|..+|..|+..|.+|+++++.+
T Consensus 167 ~~V~ViGaG~iG~~~a~~l~~~Ga~V~~~d~~~ 199 (369)
T 2eez_A 167 ASVVILGGGTVGTNAAKIALGMGAQVTILDVNH 199 (369)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 579999999999999999999999999999865
No 442
>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}
Probab=95.67 E-value=0.016 Score=45.05 Aligned_cols=33 Identities=21% Similarity=0.359 Sum_probs=29.5
Q ss_pred ccEEEECC-CHHHHHHHHHHHhCCC--cEEEEecCC
Q 044609 6 EDVVIIGA-GIAGLATAVALRRLGI--KALVLEKSD 38 (232)
Q Consensus 6 ~dV~IvG~-G~~G~~~A~~L~~~g~--~v~viE~~~ 38 (232)
.+|+|||+ |-.|.++|+.|+.+|+ +++++|...
T Consensus 9 ~KV~ViGaaG~VG~~~a~~l~~~g~~~evvLiDi~~ 44 (343)
T 3fi9_A 9 EKLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDPFA 44 (343)
T ss_dssp SEEEEETTTSHHHHHHHHHHHHTTCCSCEEEECSCH
T ss_pred CEEEEECCCChHHHHHHHHHHhcCCCCEEEEEeCCc
Confidence 57999998 9999999999999885 899999764
No 443
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=95.66 E-value=0.036 Score=45.00 Aligned_cols=38 Identities=37% Similarity=0.691 Sum_probs=33.7
Q ss_pred ccccEEEECCCHHHHHHHHHHHhCCC-cEEEEecCCCCc
Q 044609 4 VEEDVVIIGAGIAGLATAVALRRLGI-KALVLEKSDGLR 41 (232)
Q Consensus 4 ~~~dV~IvG~G~~G~~~A~~L~~~g~-~v~viE~~~~~~ 41 (232)
..+||+|||||++|+++|+.|++.|+ +|+|+|+.+.++
T Consensus 3 ~~~~~~iiG~G~~g~~~a~~l~~~g~~~v~~~e~~~~~g 41 (472)
T 1b37_A 3 VGPRVIVVGAGMSGISAAKRLSEAGITDLLILEATDHIG 41 (472)
T ss_dssp --CCEEEECCBHHHHHHHHHHHHTTCCCEEEECSSSSSB
T ss_pred CCCeEEEECCCHHHHHHHHHHHhcCCCceEEEeCCCCCC
Confidence 46899999999999999999999999 899999987654
No 444
>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6
Probab=95.66 E-value=0.014 Score=47.66 Aligned_cols=32 Identities=28% Similarity=0.532 Sum_probs=30.2
Q ss_pred cEEEECCCHHHHHHHHHHHhCCCcEEEEecCC
Q 044609 7 DVVIIGAGIAGLATAVALRRLGIKALVLEKSD 38 (232)
Q Consensus 7 dV~IvG~G~~G~~~A~~L~~~g~~v~viE~~~ 38 (232)
+|.|||+|..|..+|..|++.|++|++++|.+
T Consensus 3 kIgVIG~G~mG~~lA~~La~~G~~V~v~dr~~ 34 (478)
T 1pgj_A 3 DVGVVGLGVMGANLALNIAEKGFKVAVFNRTY 34 (478)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred EEEEEChHHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 69999999999999999999999999999864
No 445
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=95.66 E-value=0.017 Score=43.99 Aligned_cols=34 Identities=15% Similarity=0.212 Sum_probs=30.9
Q ss_pred cccEEEECCCHHHHHHHHHHHhCCC-cEEEEecCC
Q 044609 5 EEDVVIIGAGIAGLATAVALRRLGI-KALVLEKSD 38 (232)
Q Consensus 5 ~~dV~IvG~G~~G~~~A~~L~~~g~-~v~viE~~~ 38 (232)
...|+|+|+|.+|.++|..|++.|. +|+++.|..
T Consensus 141 ~~~vlVlGaGg~g~aia~~L~~~G~~~V~v~nR~~ 175 (297)
T 2egg_A 141 GKRILVIGAGGGARGIYFSLLSTAAERIDMANRTV 175 (297)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTTTCSEEEEECSSH
T ss_pred CCEEEEECcHHHHHHHHHHHHHCCCCEEEEEeCCH
Confidence 3579999999999999999999998 899999874
No 446
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=95.65 E-value=0.011 Score=47.49 Aligned_cols=34 Identities=21% Similarity=0.516 Sum_probs=31.8
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCcEEEEecCCC
Q 044609 6 EDVVIIGAGIAGLATAVALRRLGIKALVLEKSDG 39 (232)
Q Consensus 6 ~dV~IvG~G~~G~~~A~~L~~~g~~v~viE~~~~ 39 (232)
.+..|||.|..|+.+|..|+++|++|+++|+++.
T Consensus 12 ~~~~ViGlGyvGlp~A~~La~~G~~V~~~D~~~~ 45 (431)
T 3ojo_A 12 SKLTVVGLGYIGLPTSIMFAKHGVDVLGVDINQQ 45 (431)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSCHH
T ss_pred CccEEEeeCHHHHHHHHHHHHCCCEEEEEECCHH
Confidence 5789999999999999999999999999999864
No 447
>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1
Probab=95.65 E-value=0.012 Score=45.33 Aligned_cols=34 Identities=26% Similarity=0.539 Sum_probs=30.1
Q ss_pred cccEEEECCCHHHHHHHHHHHhCCC--cEEEEecCC
Q 044609 5 EEDVVIIGAGIAGLATAVALRRLGI--KALVLEKSD 38 (232)
Q Consensus 5 ~~dV~IvG~G~~G~~~A~~L~~~g~--~v~viE~~~ 38 (232)
..+|+|||+|..|.++|+.|+..++ ++.++|...
T Consensus 5 ~~KI~IiGaG~vG~~~a~~l~~~~~~~el~L~Di~~ 40 (318)
T 1ez4_A 5 HQKVVLVGDGAVGSSYAFAMAQQGIAEEFVIVDVVK 40 (318)
T ss_dssp BCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSH
T ss_pred CCEEEEECCCHHHHHHHHHHHcCCCCCEEEEEeCCc
Confidence 3689999999999999999998876 899999854
No 448
>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...
Probab=95.65 E-value=0.016 Score=44.74 Aligned_cols=33 Identities=15% Similarity=0.458 Sum_probs=30.1
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCC--cEEEEecCC
Q 044609 6 EDVVIIGAGIAGLATAVALRRLGI--KALVLEKSD 38 (232)
Q Consensus 6 ~dV~IvG~G~~G~~~A~~L~~~g~--~v~viE~~~ 38 (232)
.+|.|||+|..|.++|+.|+.+|+ ++.++|...
T Consensus 20 ~kV~ViGaG~vG~~~a~~l~~~~~~~el~L~Di~~ 54 (331)
T 4aj2_A 20 NKITVVGVGAVGMACAISILMKDLADELALVDVIE 54 (331)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSCH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCceEEEEeCCh
Confidence 589999999999999999999987 899999764
No 449
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=95.64 E-value=0.018 Score=40.81 Aligned_cols=34 Identities=29% Similarity=0.483 Sum_probs=31.1
Q ss_pred ccEEEECC-CHHHHHHHHHHHhCCCcEEEEecCCC
Q 044609 6 EDVVIIGA-GIAGLATAVALRRLGIKALVLEKSDG 39 (232)
Q Consensus 6 ~dV~IvG~-G~~G~~~A~~L~~~g~~v~viE~~~~ 39 (232)
..|+|.|| |-.|..++..|.++|++|.++.|++.
T Consensus 4 ~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~~ 38 (206)
T 1hdo_A 4 KKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSS 38 (206)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGG
T ss_pred CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeChh
Confidence 47999999 99999999999999999999998754
No 450
>3q2o_A Phosphoribosylaminoimidazole carboxylase, ATPase; carboxylates, ATP binding, lyase; 1.96A {Bacillus anthracis} PDB: 3qff_A* 3r5h_A*
Probab=95.63 E-value=0.02 Score=45.28 Aligned_cols=34 Identities=32% Similarity=0.520 Sum_probs=31.3
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCcEEEEecCCC
Q 044609 6 EDVVIIGAGIAGLATAVALRRLGIKALVLEKSDG 39 (232)
Q Consensus 6 ~dV~IvG~G~~G~~~A~~L~~~g~~v~viE~~~~ 39 (232)
..|+|+|+|..|..+|..+.+.|++|.+++..+.
T Consensus 15 k~IlIlG~G~~g~~la~aa~~~G~~vi~~d~~~~ 48 (389)
T 3q2o_A 15 KTIGIIGGGQLGRMMALAAKEMGYKIAVLDPTKN 48 (389)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEEESSTT
T ss_pred CEEEEECCCHHHHHHHHHHHHcCCEEEEEeCCCC
Confidence 5899999999999999999999999999997653
No 451
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=95.63 E-value=0.012 Score=44.35 Aligned_cols=34 Identities=15% Similarity=0.217 Sum_probs=31.3
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCcEEEEecCCC
Q 044609 6 EDVVIIGAGIAGLATAVALRRLGIKALVLEKSDG 39 (232)
Q Consensus 6 ~dV~IvG~G~~G~~~A~~L~~~g~~v~viE~~~~ 39 (232)
..|+|.|||..|..++..|.++|++|+++.|.+.
T Consensus 6 ~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~~ 39 (286)
T 3ius_A 6 GTLLSFGHGYTARVLSRALAPQGWRIIGTSRNPD 39 (286)
T ss_dssp CEEEEETCCHHHHHHHHHHGGGTCEEEEEESCGG
T ss_pred CcEEEECCcHHHHHHHHHHHHCCCEEEEEEcChh
Confidence 4799999999999999999999999999998753
No 452
>4e4t_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.55A {Burkholderia ambifaria} PDB: 3uvz_A
Probab=95.62 E-value=0.019 Score=46.00 Aligned_cols=36 Identities=19% Similarity=0.294 Sum_probs=31.9
Q ss_pred ccccEEEECCCHHHHHHHHHHHhCCCcEEEEecCCC
Q 044609 4 VEEDVVIIGAGIAGLATAVALRRLGIKALVLEKSDG 39 (232)
Q Consensus 4 ~~~dV~IvG~G~~G~~~A~~L~~~g~~v~viE~~~~ 39 (232)
....|+|+|+|..|..++..+.+.|++|.+++..+.
T Consensus 34 ~~~~IlIlG~G~lg~~~~~aa~~lG~~v~v~d~~~~ 69 (419)
T 4e4t_A 34 PGAWLGMVGGGQLGRMFCFAAQSMGYRVAVLDPDPA 69 (419)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCTT
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEECCCCc
Confidence 346899999999999999999999999999987643
No 453
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=95.62 E-value=0.018 Score=46.77 Aligned_cols=34 Identities=29% Similarity=0.411 Sum_probs=31.1
Q ss_pred cccEEEECCCHHHHHHHHHHHhCCCcEEEEecCC
Q 044609 5 EEDVVIIGAGIAGLATAVALRRLGIKALVLEKSD 38 (232)
Q Consensus 5 ~~dV~IvG~G~~G~~~A~~L~~~g~~v~viE~~~ 38 (232)
...|+|+|+|..|..+|..|++.|.+|++.|+++
T Consensus 265 GKtVvVtGaGgIG~aiA~~Laa~GA~Viv~D~~~ 298 (488)
T 3ond_A 265 GKVAVVAGYGDVGKGCAAALKQAGARVIVTEIDP 298 (488)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCH
Confidence 3679999999999999999999999999999864
No 454
>1wdk_A Fatty oxidation complex alpha subunit; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: a.100.1.3 a.100.1.3 c.2.1.6 c.14.1.3 PDB: 1wdl_A* 1wdm_A* 2d3t_A*
Probab=95.62 E-value=0.01 Score=50.95 Aligned_cols=34 Identities=24% Similarity=0.356 Sum_probs=31.4
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCcEEEEecCCC
Q 044609 6 EDVVIIGAGIAGLATAVALRRLGIKALVLEKSDG 39 (232)
Q Consensus 6 ~dV~IvG~G~~G~~~A~~L~~~g~~v~viE~~~~ 39 (232)
..|.|||+|..|..+|..|++.|++|+++|+++.
T Consensus 315 ~kV~VIGaG~MG~~iA~~la~aG~~V~l~D~~~~ 348 (715)
T 1wdk_A 315 KQAAVLGAGIMGGGIAYQSASKGTPILMKDINEH 348 (715)
T ss_dssp SSEEEECCHHHHHHHHHHHHHTTCCEEEECSSHH
T ss_pred CEEEEECCChhhHHHHHHHHhCCCEEEEEECCHH
Confidence 4699999999999999999999999999998753
No 455
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=95.61 E-value=0.012 Score=44.50 Aligned_cols=32 Identities=31% Similarity=0.404 Sum_probs=29.5
Q ss_pred cEEEECCCHHHHHHHHHHHhCCCcEEEEecCCC
Q 044609 7 DVVIIGAGIAGLATAVALRRLGIKALVLEKSDG 39 (232)
Q Consensus 7 dV~IvG~G~~G~~~A~~L~~~g~~v~viE~~~~ 39 (232)
+|.|||+|..|..+|..|++ |++|+++++.+.
T Consensus 3 ~i~iiG~G~~G~~~a~~l~~-g~~V~~~~~~~~ 34 (289)
T 2cvz_A 3 KVAFIGLGAMGYPMAGHLAR-RFPTLVWNRTFE 34 (289)
T ss_dssp CEEEECCSTTHHHHHHHHHT-TSCEEEECSSTH
T ss_pred eEEEEcccHHHHHHHHHHhC-CCeEEEEeCCHH
Confidence 59999999999999999999 999999998653
No 456
>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6
Probab=95.57 E-value=0.018 Score=44.70 Aligned_cols=34 Identities=35% Similarity=0.452 Sum_probs=30.9
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCcEEEEecCCC
Q 044609 6 EDVVIIGAGIAGLATAVALRRLGIKALVLEKSDG 39 (232)
Q Consensus 6 ~dV~IvG~G~~G~~~A~~L~~~g~~v~viE~~~~ 39 (232)
..|.|||+|..|.++|..|++.|++|+++++.+.
T Consensus 17 ~~I~IIG~G~mG~alA~~L~~~G~~V~~~~~~~~ 50 (338)
T 1np3_A 17 KKVAIIGYGSQGHAHACNLKDSGVDVTVGLRSGS 50 (338)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCEEEECCTTC
T ss_pred CEEEEECchHHHHHHHHHHHHCcCEEEEEECChH
Confidence 4699999999999999999999999999998653
No 457
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=95.55 E-value=0.017 Score=45.66 Aligned_cols=34 Identities=38% Similarity=0.517 Sum_probs=31.1
Q ss_pred cccEEEECCCHHHHHHHHHHHhCCCcEEEEecCC
Q 044609 5 EEDVVIIGAGIAGLATAVALRRLGIKALVLEKSD 38 (232)
Q Consensus 5 ~~dV~IvG~G~~G~~~A~~L~~~g~~v~viE~~~ 38 (232)
...|+|+|+|..|..+|..+...|.+|+++|+.+
T Consensus 168 g~~V~ViG~G~iG~~~a~~a~~~Ga~V~~~d~~~ 201 (377)
T 2vhw_A 168 PADVVVIGAGTAGYNAARIANGMGATVTVLDINI 201 (377)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 3579999999999999999999999999999864
No 458
>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A
Probab=95.51 E-value=0.013 Score=45.79 Aligned_cols=35 Identities=29% Similarity=0.475 Sum_probs=31.4
Q ss_pred cccEEEECCCHHHHHHHHHHHhCCC-cEEEEecCCC
Q 044609 5 EEDVVIIGAGIAGLATAVALRRLGI-KALVLEKSDG 39 (232)
Q Consensus 5 ~~dV~IvG~G~~G~~~A~~L~~~g~-~v~viE~~~~ 39 (232)
...|+|||+|-.|..+|..|++.|+ +++|+|.+..
T Consensus 118 ~~~VlvvG~GglGs~va~~La~aGvg~i~lvD~D~V 153 (353)
T 3h5n_A 118 NAKVVILGCGGIGNHVSVILATSGIGEIILIDNDQI 153 (353)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHTCSEEEEEECCBC
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCCeEEEECCCcC
Confidence 3689999999999999999999998 7899998753
No 459
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=95.47 E-value=0.02 Score=41.78 Aligned_cols=35 Identities=17% Similarity=0.322 Sum_probs=31.8
Q ss_pred cccEEEECC-CHHHHHHHHHHHhCCCcEEEEecCCC
Q 044609 5 EEDVVIIGA-GIAGLATAVALRRLGIKALVLEKSDG 39 (232)
Q Consensus 5 ~~dV~IvG~-G~~G~~~A~~L~~~g~~v~viE~~~~ 39 (232)
...|+|.|| |-.|..++..|.++|++|+++.|.+.
T Consensus 21 ~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~ 56 (236)
T 3e8x_A 21 GMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNEE 56 (236)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSGG
T ss_pred CCeEEEECCCChHHHHHHHHHHhCCCeEEEEECChH
Confidence 357999998 99999999999999999999998754
No 460
>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*
Probab=95.42 E-value=0.018 Score=43.31 Aligned_cols=33 Identities=21% Similarity=0.284 Sum_probs=30.7
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCcEEEEecCC
Q 044609 6 EDVVIIGAGIAGLATAVALRRLGIKALVLEKSD 38 (232)
Q Consensus 6 ~dV~IvG~G~~G~~~A~~L~~~g~~v~viE~~~ 38 (232)
..|+|+|+|-+|.++|..|++.|.+|+++.|..
T Consensus 120 ~~vlvlGaGg~g~a~a~~L~~~G~~v~v~~R~~ 152 (272)
T 1p77_A 120 QHVLILGAGGATKGVLLPLLQAQQNIVLANRTF 152 (272)
T ss_dssp CEEEEECCSHHHHTTHHHHHHTTCEEEEEESSH
T ss_pred CEEEEECCcHHHHHHHHHHHHCCCEEEEEECCH
Confidence 579999999999999999999999999999874
No 461
>2d4a_B Malate dehydrogenase; archaea, hyperthermophIle, oxidoreductase; 2.87A {Aeropyrum pernix}
Probab=95.37 E-value=0.018 Score=44.14 Aligned_cols=33 Identities=39% Similarity=0.629 Sum_probs=29.5
Q ss_pred cEEEECCCHHHHHHHHHHHhCCC-cEEEEecCCC
Q 044609 7 DVVIIGAGIAGLATAVALRRLGI-KALVLEKSDG 39 (232)
Q Consensus 7 dV~IvG~G~~G~~~A~~L~~~g~-~v~viE~~~~ 39 (232)
+|.|||+|..|.++|..|+..++ ++.++|....
T Consensus 1 KI~IiGaG~vG~~~a~~l~~~~l~el~L~Di~~~ 34 (308)
T 2d4a_B 1 MITILGAGKVGMATAVMLMMRGYDDLLLIARTPG 34 (308)
T ss_dssp CEEEECCSHHHHHHHHHHHHHTCSCEEEECSSTT
T ss_pred CEEEECcCHHHHHHHHHHHhCCCCEEEEEcCChh
Confidence 48999999999999999998888 6999998753
No 462
>1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6
Probab=95.33 E-value=0.017 Score=43.05 Aligned_cols=30 Identities=27% Similarity=0.307 Sum_probs=28.0
Q ss_pred cEEEECCCHHHHHHHHHHHhCCCcEEEEec
Q 044609 7 DVVIIGAGIAGLATAVALRRLGIKALVLEK 36 (232)
Q Consensus 7 dV~IvG~G~~G~~~A~~L~~~g~~v~viE~ 36 (232)
+|.|||+|..|..+|..|++.|++|+++++
T Consensus 2 ~I~iIG~G~mG~~la~~l~~~g~~V~~~~~ 31 (264)
T 1i36_A 2 RVGFIGFGEVAQTLASRLRSRGVEVVTSLE 31 (264)
T ss_dssp EEEEESCSHHHHHHHHHHHHTTCEEEECCT
T ss_pred eEEEEechHHHHHHHHHHHHCCCeEEEeCC
Confidence 599999999999999999999999999876
No 463
>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*
Probab=95.32 E-value=0.019 Score=43.19 Aligned_cols=35 Identities=23% Similarity=0.266 Sum_probs=31.6
Q ss_pred cccEEEECCCHHHHHHHHHHHhCCC-cEEEEecCCC
Q 044609 5 EEDVVIIGAGIAGLATAVALRRLGI-KALVLEKSDG 39 (232)
Q Consensus 5 ~~dV~IvG~G~~G~~~A~~L~~~g~-~v~viE~~~~ 39 (232)
...++|+|+|-+|.++|..|++.|. +|+++.|...
T Consensus 117 ~k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~~~ 152 (277)
T 3don_A 117 DAYILILGAGGASKGIANELYKIVRPTLTVANRTMS 152 (277)
T ss_dssp GCCEEEECCSHHHHHHHHHHHTTCCSCCEEECSCGG
T ss_pred CCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCHH
Confidence 3579999999999999999999998 8999998754
No 464
>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}
Probab=95.31 E-value=0.026 Score=41.92 Aligned_cols=32 Identities=34% Similarity=0.504 Sum_probs=30.1
Q ss_pred cEEEECCCHHHHHHHHHHHhCCC-cEEEEecCC
Q 044609 7 DVVIIGAGIAGLATAVALRRLGI-KALVLEKSD 38 (232)
Q Consensus 7 dV~IvG~G~~G~~~A~~L~~~g~-~v~viE~~~ 38 (232)
.++|+|+|-+|.+++..|.+.|. +|++++|..
T Consensus 110 ~vliiGaGg~a~ai~~~L~~~G~~~I~v~nR~~ 142 (253)
T 3u62_A 110 PVVVVGAGGAARAVIYALLQMGVKDIWVVNRTI 142 (253)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCCEEEEESCH
T ss_pred eEEEECcHHHHHHHHHHHHHcCCCEEEEEeCCH
Confidence 79999999999999999999998 899999875
No 465
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=95.30 E-value=0.018 Score=43.38 Aligned_cols=33 Identities=27% Similarity=0.474 Sum_probs=30.5
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCcEEEEecCC
Q 044609 6 EDVVIIGAGIAGLATAVALRRLGIKALVLEKSD 38 (232)
Q Consensus 6 ~dV~IvG~G~~G~~~A~~L~~~g~~v~viE~~~ 38 (232)
..|+|||+|-+|.++|..|.+.|.+|++++|..
T Consensus 130 ~~v~iiGaG~~g~aia~~L~~~g~~V~v~~r~~ 162 (275)
T 2hk9_A 130 KSILVLGAGGASRAVIYALVKEGAKVFLWNRTK 162 (275)
T ss_dssp SEEEEECCSHHHHHHHHHHHHHTCEEEEECSSH
T ss_pred CEEEEECchHHHHHHHHHHHHcCCEEEEEECCH
Confidence 579999999999999999999999999999864
No 466
>3zwc_A Peroxisomal bifunctional enzyme; beta oxidation pathway, oxidoreductase, lipid metabolism, LY isomerase, peroxisome, fatty acid metabolism; HET: NAD HSC; 2.30A {Rattus norvegicus} PDB: 3zw9_A* 3zw8_A* 3zwa_A* 3zwb_A* 2x58_A*
Probab=95.29 E-value=0.018 Score=49.46 Aligned_cols=34 Identities=26% Similarity=0.521 Sum_probs=31.6
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCcEEEEecCCC
Q 044609 6 EDVVIIGAGIAGLATAVALRRLGIKALVLEKSDG 39 (232)
Q Consensus 6 ~dV~IvG~G~~G~~~A~~L~~~g~~v~viE~~~~ 39 (232)
..|.|||+|..|...|..+++.|++|+++|..+.
T Consensus 317 ~~v~ViGaG~MG~gIA~~~a~aG~~V~l~D~~~~ 350 (742)
T 3zwc_A 317 SSVGVLGLGTMGRGIAISFARVGISVVAVESDPK 350 (742)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCEEEEECSSHH
T ss_pred cEEEEEcccHHHHHHHHHHHhCCCchhcccchHh
Confidence 5899999999999999999999999999998754
No 467
>4gsl_A Ubiquitin-like modifier-activating enzyme ATG7; ubiquitin-like protein activation enzyme, ubiquitin-like Pro transfer enzyme, protein transport; 2.70A {Saccharomyces cerevisiae} PDB: 3vh2_A 4gsk_A 3vh1_A
Probab=95.28 E-value=0.022 Score=47.47 Aligned_cols=35 Identities=26% Similarity=0.419 Sum_probs=31.4
Q ss_pred cccEEEECCCHHHHHHHHHHHhCCC-cEEEEecCCC
Q 044609 5 EEDVVIIGAGIAGLATAVALRRLGI-KALVLEKSDG 39 (232)
Q Consensus 5 ~~dV~IvG~G~~G~~~A~~L~~~g~-~v~viE~~~~ 39 (232)
...|+|||+|-.|+.+|..|++.|+ +++|+|.+.-
T Consensus 326 ~arVLIVGaGGLGs~vA~~La~aGVG~ItLvD~D~V 361 (615)
T 4gsl_A 326 NTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNGTV 361 (615)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCBC
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCCC
Confidence 3689999999999999999999998 7899998753
No 468
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=95.28 E-value=0.029 Score=42.56 Aligned_cols=34 Identities=26% Similarity=0.444 Sum_probs=31.2
Q ss_pred cccEEEECCCHHHHHHHHHHHhCCCcEEEEecCC
Q 044609 5 EEDVVIIGAGIAGLATAVALRRLGIKALVLEKSD 38 (232)
Q Consensus 5 ~~dV~IvG~G~~G~~~A~~L~~~g~~v~viE~~~ 38 (232)
...|.|||+|..|..+|..|...|.+|+++++..
T Consensus 155 g~~v~IiG~G~iG~~~a~~l~~~G~~V~~~dr~~ 188 (293)
T 3d4o_A 155 GANVAVLGLGRVGMSVARKFAALGAKVKVGARES 188 (293)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSH
T ss_pred CCEEEEEeeCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 3579999999999999999999999999999864
No 469
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=95.27 E-value=0.031 Score=42.60 Aligned_cols=34 Identities=26% Similarity=0.433 Sum_probs=31.1
Q ss_pred cccEEEECCCHHHHHHHHHHHhCCCcEEEEecCC
Q 044609 5 EEDVVIIGAGIAGLATAVALRRLGIKALVLEKSD 38 (232)
Q Consensus 5 ~~dV~IvG~G~~G~~~A~~L~~~g~~v~viE~~~ 38 (232)
...|.|||+|..|..+|..|...|.+|+++++..
T Consensus 157 g~~v~IiG~G~iG~~~a~~l~~~G~~V~~~d~~~ 190 (300)
T 2rir_A 157 GSQVAVLGLGRTGMTIARTFAALGANVKVGARSS 190 (300)
T ss_dssp TSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSH
T ss_pred CCEEEEEcccHHHHHHHHHHHHCCCEEEEEECCH
Confidence 3579999999999999999999999999999864
No 470
>3vh1_A Ubiquitin-like modifier-activating enzyme ATG7; autophagy, zinc binding, metal binding protein; 3.00A {Saccharomyces cerevisiae} PDB: 3vh2_A
Probab=95.18 E-value=0.021 Score=47.43 Aligned_cols=33 Identities=27% Similarity=0.469 Sum_probs=30.5
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCC-cEEEEecCC
Q 044609 6 EDVVIIGAGIAGLATAVALRRLGI-KALVLEKSD 38 (232)
Q Consensus 6 ~dV~IvG~G~~G~~~A~~L~~~g~-~v~viE~~~ 38 (232)
..|+|||+|-.|..+|..|++.|+ +++|+|.+.
T Consensus 328 ~kVLIVGaGGLGs~va~~La~aGVG~ItLvD~D~ 361 (598)
T 3vh1_A 328 TKVLLLGAGTLGCYVSRALIAWGVRKITFVDNGT 361 (598)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCCEEEEECCSB
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCCEEEEECCCc
Confidence 689999999999999999999998 789999774
No 471
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=95.15 E-value=0.032 Score=40.01 Aligned_cols=32 Identities=25% Similarity=0.339 Sum_probs=29.7
Q ss_pred cEEEECC-CHHHHHHHHHHHhCCCcEEEEecCC
Q 044609 7 DVVIIGA-GIAGLATAVALRRLGIKALVLEKSD 38 (232)
Q Consensus 7 dV~IvG~-G~~G~~~A~~L~~~g~~v~viE~~~ 38 (232)
.|+|.|| |-.|..++..|.++|++|.++.|++
T Consensus 2 kvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~ 34 (221)
T 3ew7_A 2 KIGIIGATGRAGSRILEEAKNRGHEVTAIVRNA 34 (221)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCS
T ss_pred eEEEEcCCchhHHHHHHHHHhCCCEEEEEEcCc
Confidence 4999996 9999999999999999999999875
No 472
>1kjq_A GART 2, phosphoribosylglycinamide formyltransferase 2, 5'-; ATP-grAsp, purine biosynthesis, nucleotide; HET: ADP MPO; 1.05A {Escherichia coli} SCOP: b.84.2.1 c.30.1.1 d.142.1.2 PDB: 1kj9_A* 1kji_A* 1kjj_A* 1kj8_A* 1eyz_A* 1ez1_A*
Probab=95.15 E-value=0.033 Score=44.02 Aligned_cols=39 Identities=21% Similarity=0.507 Sum_probs=33.5
Q ss_pred CCcccccEEEECCCHHHHHHHHHHHhCCCcEEEEecCCC
Q 044609 1 MEMVEEDVVIIGAGIAGLATAVALRRLGIKALVLEKSDG 39 (232)
Q Consensus 1 m~~~~~dV~IvG~G~~G~~~A~~L~~~g~~v~viE~~~~ 39 (232)
|..+...|+|+|+|..|...+..+.+.|++|.+++..+.
T Consensus 7 m~~~~~~ili~g~g~~~~~~~~a~~~~G~~v~~~~~~~~ 45 (391)
T 1kjq_A 7 LRPAATRVMLLGSGELGKEVAIECQRLGVEVIAVDRYAD 45 (391)
T ss_dssp TSTTCCEEEEESCSHHHHHHHHHHHTTTCEEEEEESSTT
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEECCCC
Confidence 444557899999999999999999999999999997643
No 473
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=95.14 E-value=0.041 Score=39.64 Aligned_cols=34 Identities=15% Similarity=0.173 Sum_probs=30.3
Q ss_pred ccEEEECC-CHHHHHHHHHHH-hCCCcEEEEecCCC
Q 044609 6 EDVVIIGA-GIAGLATAVALR-RLGIKALVLEKSDG 39 (232)
Q Consensus 6 ~dV~IvG~-G~~G~~~A~~L~-~~g~~v~viE~~~~ 39 (232)
..|+|.|| |-.|..+|..|+ +.|++|+++.|++.
T Consensus 6 k~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~~~ 41 (221)
T 3r6d_A 6 XYITILGAAGQIAQXLTATLLTYTDMHITLYGRQLK 41 (221)
T ss_dssp SEEEEESTTSHHHHHHHHHHHHHCCCEEEEEESSHH
T ss_pred EEEEEEeCCcHHHHHHHHHHHhcCCceEEEEecCcc
Confidence 35999995 999999999999 89999999998754
No 474
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=95.11 E-value=0.019 Score=44.54 Aligned_cols=36 Identities=19% Similarity=0.226 Sum_probs=31.9
Q ss_pred ccccEEEECC-CHHHHHHHHHHHhCCCcEEEEecCCC
Q 044609 4 VEEDVVIIGA-GIAGLATAVALRRLGIKALVLEKSDG 39 (232)
Q Consensus 4 ~~~dV~IvG~-G~~G~~~A~~L~~~g~~v~viE~~~~ 39 (232)
+...|+|.|| |..|..++..|.++|++|.++.|...
T Consensus 24 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~ 60 (351)
T 3ruf_A 24 SPKTWLITGVAGFIGSNLLEKLLKLNQVVIGLDNFST 60 (351)
T ss_dssp SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSS
T ss_pred CCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCC
Confidence 3468999996 99999999999999999999998654
No 475
>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*
Probab=95.09 E-value=0.03 Score=41.76 Aligned_cols=32 Identities=38% Similarity=0.597 Sum_probs=29.9
Q ss_pred cEEEECCCHHHHHHHHHHHhCCCcEEEEecCC
Q 044609 7 DVVIIGAGIAGLATAVALRRLGIKALVLEKSD 38 (232)
Q Consensus 7 dV~IvG~G~~G~~~A~~L~~~g~~v~viE~~~ 38 (232)
.|+|||+|-+|.++|..|.+.|.+|++++|..
T Consensus 118 ~v~iiG~G~~g~~~a~~l~~~g~~v~v~~r~~ 149 (263)
T 2d5c_A 118 PALVLGAGGAGRAVAFALREAGLEVWVWNRTP 149 (263)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred eEEEECCcHHHHHHHHHHHHCCCEEEEEECCH
Confidence 79999999999999999999999999999864
No 476
>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A
Probab=95.09 E-value=0.023 Score=42.21 Aligned_cols=33 Identities=21% Similarity=0.198 Sum_probs=30.3
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCcEEEEecCC
Q 044609 6 EDVVIIGAGIAGLATAVALRRLGIKALVLEKSD 38 (232)
Q Consensus 6 ~dV~IvG~G~~G~~~A~~L~~~g~~v~viE~~~ 38 (232)
.+|.|||+|..|..+|..|.+.|.+|.++++++
T Consensus 4 m~i~iiG~G~mG~~~a~~l~~~g~~v~~~~~~~ 36 (259)
T 2ahr_A 4 MKIGIIGVGKMASAIIKGLKQTPHELIISGSSL 36 (259)
T ss_dssp CEEEEECCSHHHHHHHHHHTTSSCEEEEECSSH
T ss_pred cEEEEECCCHHHHHHHHHHHhCCCeEEEECCCH
Confidence 379999999999999999999999999999864
No 477
>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}
Probab=95.08 E-value=0.032 Score=42.54 Aligned_cols=35 Identities=29% Similarity=0.330 Sum_probs=32.1
Q ss_pred cccEEEECC-CHHHHHHHHHHHhCCCcEEEEecCCC
Q 044609 5 EEDVVIIGA-GIAGLATAVALRRLGIKALVLEKSDG 39 (232)
Q Consensus 5 ~~dV~IvG~-G~~G~~~A~~L~~~g~~v~viE~~~~ 39 (232)
...|+|.|| |..|..++..|.++|++|+++.|...
T Consensus 7 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~ 42 (321)
T 3vps_A 7 KHRILITGGAGFIGGHLARALVASGEEVTVLDDLRV 42 (321)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCCEEEECCCSS
T ss_pred CCeEEEECCCChHHHHHHHHHHHCCCEEEEEecCCc
Confidence 468999999 99999999999999999999998765
No 478
>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*
Probab=95.07 E-value=0.025 Score=43.63 Aligned_cols=34 Identities=24% Similarity=0.407 Sum_probs=30.0
Q ss_pred cccEEEECCCHHHHHHHHHHHhCCC--cEEEEecCC
Q 044609 5 EEDVVIIGAGIAGLATAVALRRLGI--KALVLEKSD 38 (232)
Q Consensus 5 ~~dV~IvG~G~~G~~~A~~L~~~g~--~v~viE~~~ 38 (232)
+.+|+|||+|..|.++|+.|+..++ ++.++|...
T Consensus 9 ~~KI~IiGaG~vG~~la~~l~~~~~~~el~L~Di~~ 44 (326)
T 2zqz_A 9 HQKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDIFK 44 (326)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSCH
T ss_pred CCEEEEECCCHHHHHHHHHHHcCCCCCEEEEEeCCc
Confidence 4689999999999999999998876 799999854
No 479
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=95.04 E-value=0.035 Score=42.57 Aligned_cols=34 Identities=24% Similarity=0.362 Sum_probs=30.8
Q ss_pred cccEEEECCCHHHHHHHHHHHhCCC-cEEEEecCC
Q 044609 5 EEDVVIIGAGIAGLATAVALRRLGI-KALVLEKSD 38 (232)
Q Consensus 5 ~~dV~IvG~G~~G~~~A~~L~~~g~-~v~viE~~~ 38 (232)
...++|+|+|-+|.++|..|++.|. +|+|+.|..
T Consensus 154 gk~~lVlGaGG~g~aia~~L~~~Ga~~V~i~nR~~ 188 (315)
T 3tnl_A 154 GKKMTICGAGGAATAICIQAALDGVKEISIFNRKD 188 (315)
T ss_dssp TSEEEEECCSHHHHHHHHHHHHTTCSEEEEEECSS
T ss_pred CCEEEEECCChHHHHHHHHHHHCCCCEEEEEECCC
Confidence 3579999999999999999999998 899999873
No 480
>2yjz_A Metalloreductase steap4; oxidoreductase, metabolic syndrome; HET: NAP; 2.20A {Rattus norvegicus}
Probab=94.04 E-value=0.0039 Score=44.63 Aligned_cols=34 Identities=18% Similarity=0.246 Sum_probs=30.9
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCcEEEEecCCC
Q 044609 6 EDVVIIGAGIAGLATAVALRRLGIKALVLEKSDG 39 (232)
Q Consensus 6 ~dV~IvG~G~~G~~~A~~L~~~g~~v~viE~~~~ 39 (232)
..|.|||+|..|..+|..|.+.|.+|.+++|.+.
T Consensus 20 ~~I~iIG~G~mG~~la~~L~~~G~~V~~~~r~~~ 53 (201)
T 2yjz_A 20 GVVCIFGTGDFGKSLGLKMLQCGYSVVFGSRNPQ 53 (201)
Confidence 4699999999999999999999999999998754
No 481
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=95.01 E-value=0.038 Score=41.72 Aligned_cols=34 Identities=38% Similarity=0.419 Sum_probs=30.6
Q ss_pred cccEEEECCCHHHHHHHHHHHhCCC-cEEEEecCC
Q 044609 5 EEDVVIIGAGIAGLATAVALRRLGI-KALVLEKSD 38 (232)
Q Consensus 5 ~~dV~IvG~G~~G~~~A~~L~~~g~-~v~viE~~~ 38 (232)
...++|+|+|-+|.++|..|++.|. +|+|+.|..
T Consensus 127 ~k~vlVlGaGG~g~aia~~L~~~G~~~v~i~~R~~ 161 (283)
T 3jyo_A 127 LDSVVQVGAGGVGNAVAYALVTHGVQKLQVADLDT 161 (283)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCSEEEEECSSH
T ss_pred CCEEEEECCcHHHHHHHHHHHHCCCCEEEEEECCH
Confidence 3579999999999999999999999 699998874
No 482
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=95.01 E-value=0.018 Score=46.59 Aligned_cols=56 Identities=16% Similarity=0.103 Sum_probs=43.0
Q ss_pred HHHHHHHhhhCC--CCeEEeCceEEEEEec--CCCCCccEEEEeCCCcEEEccEEEecCCCchh
Q 044609 108 QSLLEALADELP--DDTIQFSSKIAAIDSQ--TLNGSSAAIINLGDSTIIKAKVLIGCDGVHSM 167 (232)
Q Consensus 108 ~~l~~~l~~~~~--~~~i~~~~~v~~i~~~--~~~g~~~~~v~~~~g~~~~a~~vV~A~G~~S~ 167 (232)
..+.+.|.+.+. |++++++++|++|..+ + +.. +.|.+ +|+++.||.||.|.|.++.
T Consensus 242 ~~l~~al~~~~~~~G~~i~~~~~V~~i~~~~~~--~~~-~~V~~-~g~~~~ad~VV~a~~~~~~ 301 (453)
T 2bcg_G 242 GELPQGFARLSAIYGGTYMLDTPIDEVLYKKDT--GKF-EGVKT-KLGTFKAPLVIADPTYFPE 301 (453)
T ss_dssp THHHHHHHHHHHHTTCEEECSCCCCEEEEETTT--TEE-EEEEE-TTEEEECSCEEECGGGCGG
T ss_pred HHHHHHHHHHHHHcCCEEECCCEEEEEEEECCC--CeE-EEEEE-CCeEEECCEEEECCCccch
Confidence 356666666553 8899999999999876 4 443 55665 5778999999999999864
No 483
>1tt5_B Ubiquitin-activating enzyme E1C isoform 1; cell cycle, ligase; 2.60A {Homo sapiens} SCOP: c.111.1.2 PDB: 3dbl_B 3dbr_B 3dbh_B 3gzn_B* 1yov_B 1r4m_B 1r4n_B*
Probab=95.00 E-value=0.028 Score=45.16 Aligned_cols=34 Identities=26% Similarity=0.332 Sum_probs=30.9
Q ss_pred cccEEEECCCHHHHHHHHHHHhCCC-cEEEEecCC
Q 044609 5 EEDVVIIGAGIAGLATAVALRRLGI-KALVLEKSD 38 (232)
Q Consensus 5 ~~dV~IvG~G~~G~~~A~~L~~~g~-~v~viE~~~ 38 (232)
...|+|||+|-.|..+|..|++.|+ +++|+|.+.
T Consensus 40 ~~~VlvvG~GGlGs~va~~La~aGvg~i~ivD~D~ 74 (434)
T 1tt5_B 40 TCKVLVIGAGGLGCELLKNLALSGFRQIHVIDMDT 74 (434)
T ss_dssp TCCEEEECSSTHHHHHHHHHHHTTCCCEEEEECCB
T ss_pred CCEEEEECcCHHHHHHHHHHHHcCCCEEEEEcCCE
Confidence 4689999999999999999999998 799998764
No 484
>2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2
Probab=94.99 E-value=0.026 Score=40.31 Aligned_cols=40 Identities=15% Similarity=0.179 Sum_probs=32.2
Q ss_pred CCcccccEEEEC-CCHHHHHHHHHHHhCCC--cEEEEecCCCC
Q 044609 1 MEMVEEDVVIIG-AGIAGLATAVALRRLGI--KALVLEKSDGL 40 (232)
Q Consensus 1 m~~~~~dV~IvG-~G~~G~~~A~~L~~~g~--~v~viE~~~~~ 40 (232)
|+.+...|+|.| +|-.|..++..|.++|. +|.++.|.+..
T Consensus 1 M~~~~~~vlVtGatG~iG~~l~~~l~~~g~~~~V~~~~r~~~~ 43 (215)
T 2a35_A 1 MHSTPKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALA 43 (215)
T ss_dssp ---CCCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCC
T ss_pred CCCCCceEEEECCCcHHHHHHHHHHHhCCCCCeEEEEeCCCcc
Confidence 554556899999 59999999999999998 99999987653
No 485
>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*
Probab=94.97 E-value=0.045 Score=42.42 Aligned_cols=34 Identities=24% Similarity=0.373 Sum_probs=31.5
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCcEEEEecCCC
Q 044609 6 EDVVIIGAGIAGLATAVALRRLGIKALVLEKSDG 39 (232)
Q Consensus 6 ~dV~IvG~G~~G~~~A~~L~~~g~~v~viE~~~~ 39 (232)
..|.|||.|-.|..+|..|+..|.+|+++++...
T Consensus 151 ~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~~ 184 (334)
T 2dbq_A 151 KTIGIIGLGRIGQAIAKRAKGFNMRILYYSRTRK 184 (334)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred CEEEEEccCHHHHHHHHHHHhCCCEEEEECCCcc
Confidence 5799999999999999999999999999998764
No 486
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}
Probab=94.97 E-value=0.017 Score=43.72 Aligned_cols=32 Identities=31% Similarity=0.388 Sum_probs=29.4
Q ss_pred cEEEECCCHHHHHHHHHHHhCCCcEEEEecCCC
Q 044609 7 DVVIIGAGIAGLATAVALRRLGIKALVLEKSDG 39 (232)
Q Consensus 7 dV~IvG~G~~G~~~A~~L~~~g~~v~viE~~~~ 39 (232)
+|.|||+|..|..+|..|++.|++|++++ ++.
T Consensus 5 ~i~iiG~G~~G~~~a~~l~~~g~~V~~~~-~~~ 36 (295)
T 1yb4_A 5 KLGFIGLGIMGSPMAINLARAGHQLHVTT-IGP 36 (295)
T ss_dssp EEEECCCSTTHHHHHHHHHHTTCEEEECC-SSC
T ss_pred EEEEEccCHHHHHHHHHHHhCCCEEEEEc-CHH
Confidence 69999999999999999999999999998 543
No 487
>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*
Probab=94.95 E-value=0.033 Score=42.61 Aligned_cols=34 Identities=21% Similarity=0.410 Sum_probs=31.1
Q ss_pred ccEEEECC-CHHHHHHHHHHHhCCCcEEEEecCCC
Q 044609 6 EDVVIIGA-GIAGLATAVALRRLGIKALVLEKSDG 39 (232)
Q Consensus 6 ~dV~IvG~-G~~G~~~A~~L~~~g~~v~viE~~~~ 39 (232)
..|+|.|| |-.|..++..|.++|++|.++.|++.
T Consensus 12 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~ 46 (318)
T 2r6j_A 12 SKILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPNS 46 (318)
T ss_dssp CCEEEETTTSTTHHHHHHHHHHTTCCEEEEECTTC
T ss_pred CeEEEECCCchHHHHHHHHHHHCCCcEEEEECCCC
Confidence 47999997 99999999999999999999999864
No 488
>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*
Probab=94.93 E-value=0.044 Score=41.31 Aligned_cols=34 Identities=21% Similarity=0.175 Sum_probs=30.6
Q ss_pred cccEEEECCCHHHHHHHHHHHhCCC-cEEEEecCC
Q 044609 5 EEDVVIIGAGIAGLATAVALRRLGI-KALVLEKSD 38 (232)
Q Consensus 5 ~~dV~IvG~G~~G~~~A~~L~~~g~-~v~viE~~~ 38 (232)
...++|+|+|-+|.++|..|++.|. +|+++.|..
T Consensus 126 ~k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~~ 160 (281)
T 3o8q_A 126 GATILLIGAGGAARGVLKPLLDQQPASITVTNRTF 160 (281)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTTCCSEEEEEESSH
T ss_pred CCEEEEECchHHHHHHHHHHHhcCCCeEEEEECCH
Confidence 3579999999999999999999997 899999864
No 489
>1y8q_A Ubiquitin-like 1 activating enzyme E1A; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_A* 3kyc_A* 3kyd_A*
Probab=94.93 E-value=0.025 Score=44.02 Aligned_cols=34 Identities=21% Similarity=0.287 Sum_probs=30.9
Q ss_pred cccEEEECCCHHHHHHHHHHHhCCC-cEEEEecCC
Q 044609 5 EEDVVIIGAGIAGLATAVALRRLGI-KALVLEKSD 38 (232)
Q Consensus 5 ~~dV~IvG~G~~G~~~A~~L~~~g~-~v~viE~~~ 38 (232)
...|+|||+|-.|..+|..|++.|+ +++|+|.+.
T Consensus 36 ~~~VlivG~GGlG~~ia~~La~~Gvg~itlvD~d~ 70 (346)
T 1y8q_A 36 ASRVLLVGLKGLGAEIAKNLILAGVKGLTMLDHEQ 70 (346)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCB
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCCEEEEEECCC
Confidence 3689999999999999999999999 789998764
No 490
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=94.93 E-value=0.039 Score=39.74 Aligned_cols=32 Identities=31% Similarity=0.521 Sum_probs=29.8
Q ss_pred cEEEECC-CHHHHHHHHHHHhCCCcEEEEecCC
Q 044609 7 DVVIIGA-GIAGLATAVALRRLGIKALVLEKSD 38 (232)
Q Consensus 7 dV~IvG~-G~~G~~~A~~L~~~g~~v~viE~~~ 38 (232)
+|+|.|| |-.|..++..|.++|++|.++.|.+
T Consensus 2 kilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~ 34 (224)
T 3h2s_A 2 KIAVLGATGRAGSAIVAEARRRGHEVLAVVRDP 34 (224)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred EEEEEcCCCHHHHHHHHHHHHCCCEEEEEEecc
Confidence 4999998 9999999999999999999999874
No 491
>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*
Probab=94.92 E-value=0.028 Score=43.15 Aligned_cols=32 Identities=19% Similarity=0.330 Sum_probs=29.2
Q ss_pred cEEEECC-CHHHHHHHHHHHhCC--CcEEEEecCC
Q 044609 7 DVVIIGA-GIAGLATAVALRRLG--IKALVLEKSD 38 (232)
Q Consensus 7 dV~IvG~-G~~G~~~A~~L~~~g--~~v~viE~~~ 38 (232)
+|+|||| |..|.++|..|+..+ .++.++|..+
T Consensus 2 KI~IiGa~G~VG~~la~~L~~~~~~~ev~L~Di~~ 36 (314)
T 1mld_A 2 KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAH 36 (314)
T ss_dssp EEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSS
T ss_pred EEEEECCCChHHHHHHHHHHhCCCCcEEEEEeCCc
Confidence 5999998 999999999999988 5899999876
No 492
>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5
Probab=94.91 E-value=0.029 Score=42.49 Aligned_cols=32 Identities=28% Similarity=0.411 Sum_probs=29.4
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCcEEEEecCC
Q 044609 6 EDVVIIGAGIAGLATAVALRRLGIKALVLEKSD 38 (232)
Q Consensus 6 ~dV~IvG~G~~G~~~A~~L~~~g~~v~viE~~~ 38 (232)
..++|+|+|-+|.++|..|++.| +|++++|..
T Consensus 129 k~vlV~GaGgiG~aia~~L~~~G-~V~v~~r~~ 160 (287)
T 1nvt_A 129 KNIVIYGAGGAARAVAFELAKDN-NIIIANRTV 160 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHTSSS-EEEEECSSH
T ss_pred CEEEEECchHHHHHHHHHHHHCC-CEEEEECCH
Confidence 57999999999999999999999 999998864
No 493
>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}
Probab=94.89 E-value=0.056 Score=39.86 Aligned_cols=40 Identities=28% Similarity=0.318 Sum_probs=33.0
Q ss_pred CCcccccEEEECC-CHHHHHHHHHHHhCCCcEEEEecCCCC
Q 044609 1 MEMVEEDVVIIGA-GIAGLATAVALRRLGIKALVLEKSDGL 40 (232)
Q Consensus 1 m~~~~~dV~IvG~-G~~G~~~A~~L~~~g~~v~viE~~~~~ 40 (232)
|.+....++|.|| |-.|..+|..|+++|.+|++++|+...
T Consensus 3 m~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~ 43 (250)
T 2fwm_X 3 MDFSGKNVWVTGAGKGIGYATALAFVEAGAKVTGFDQAFTQ 43 (250)
T ss_dssp CCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCCCS
T ss_pred CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCchhh
Confidence 4444567888886 788999999999999999999987653
No 494
>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*
Probab=94.87 E-value=0.05 Score=39.80 Aligned_cols=34 Identities=24% Similarity=0.377 Sum_probs=30.3
Q ss_pred cccEEEECC-CHHHHHHHHHHHhCCCcEEEEecCC
Q 044609 5 EEDVVIIGA-GIAGLATAVALRRLGIKALVLEKSD 38 (232)
Q Consensus 5 ~~dV~IvG~-G~~G~~~A~~L~~~g~~v~viE~~~ 38 (232)
...|+|.|| |-.|..+|..|+++|.+|+++.|+.
T Consensus 7 ~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~ 41 (244)
T 3d3w_A 7 GRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQ 41 (244)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CcEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 357999998 7999999999999999999998864
No 495
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=94.85 E-value=0.028 Score=44.82 Aligned_cols=33 Identities=30% Similarity=0.424 Sum_probs=30.8
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCcEEEEecCC
Q 044609 6 EDVVIIGAGIAGLATAVALRRLGIKALVLEKSD 38 (232)
Q Consensus 6 ~dV~IvG~G~~G~~~A~~L~~~g~~v~viE~~~ 38 (232)
..|+|+|.|..|..+|..|...|.+|+++|+++
T Consensus 221 ktV~ViG~G~IGk~vA~~Lra~Ga~Viv~D~dp 253 (435)
T 3gvp_A 221 KQVVVCGYGEVGKGCCAALKAMGSIVYVTEIDP 253 (435)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CEEEEEeeCHHHHHHHHHHHHCCCEEEEEeCCh
Confidence 589999999999999999999999999999864
No 496
>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*
Probab=94.85 E-value=0.047 Score=41.26 Aligned_cols=34 Identities=18% Similarity=0.334 Sum_probs=30.7
Q ss_pred cccEEEEC-CCHHHHHHHHHHHhCCCcEEEEecCC
Q 044609 5 EEDVVIIG-AGIAGLATAVALRRLGIKALVLEKSD 38 (232)
Q Consensus 5 ~~dV~IvG-~G~~G~~~A~~L~~~g~~v~viE~~~ 38 (232)
...++|+| +|-+|.++|..|++.|.+|++++|..
T Consensus 119 gk~vlVtGaaGGiG~aia~~L~~~G~~V~i~~R~~ 153 (287)
T 1lu9_A 119 GKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKL 153 (287)
T ss_dssp TCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSH
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCcCEEEEEECCH
Confidence 35799999 99999999999999999999999863
No 497
>2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A*
Probab=94.85 E-value=0.028 Score=42.65 Aligned_cols=32 Identities=16% Similarity=0.171 Sum_probs=28.5
Q ss_pred cEEEECCCHHHHHHHHHHHhCCC--cEEEEecCC
Q 044609 7 DVVIIGAGIAGLATAVALRRLGI--KALVLEKSD 38 (232)
Q Consensus 7 dV~IvG~G~~G~~~A~~L~~~g~--~v~viE~~~ 38 (232)
+|.|||+|-.|.++|+.|..+++ ++.|+|..+
T Consensus 2 KV~IiGaG~VG~~~a~~l~~~~~~~el~L~Di~~ 35 (294)
T 2x0j_A 2 KLGFVGAGRVGSTSAFTCLLNLDVDEIALVDIAE 35 (294)
T ss_dssp EEEEECCSHHHHHHHHHHHHHSCCSEEEEECSSH
T ss_pred EEEEECcCHHHHHHHHHHHhCCCCCEEEEEeCCC
Confidence 59999999999999999998775 799999765
No 498
>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*
Probab=94.84 E-value=0.048 Score=42.54 Aligned_cols=39 Identities=18% Similarity=0.222 Sum_probs=32.5
Q ss_pred CCcccccEEEECC-CHHHHHHHHHHHhCCCcEEEEecCCC
Q 044609 1 MEMVEEDVVIIGA-GIAGLATAVALRRLGIKALVLEKSDG 39 (232)
Q Consensus 1 m~~~~~dV~IvG~-G~~G~~~A~~L~~~g~~v~viE~~~~ 39 (232)
|+|....|+|.|| |-.|..++..|.++|++|.++.|++.
T Consensus 1 M~~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~ 40 (352)
T 1xgk_A 1 MAQQKKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLK 40 (352)
T ss_dssp --CCCCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSC
T ss_pred CCCCCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCC
Confidence 6554568999996 99999999999999999999998754
No 499
>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*
Probab=94.83 E-value=0.033 Score=42.46 Aligned_cols=33 Identities=24% Similarity=0.351 Sum_probs=31.0
Q ss_pred cEEEECCCHHHHHHHHHHHhCCCcEEEEecCCC
Q 044609 7 DVVIIGAGIAGLATAVALRRLGIKALVLEKSDG 39 (232)
Q Consensus 7 dV~IvG~G~~G~~~A~~L~~~g~~v~viE~~~~ 39 (232)
+|-+||-|..|..+|..|.+.|++|++++|.+.
T Consensus 5 kIgfIGlG~MG~~mA~~L~~~G~~v~v~dr~~~ 37 (300)
T 3obb_A 5 QIAFIGLGHMGAPMATNLLKAGYLLNVFDLVQS 37 (300)
T ss_dssp EEEEECCSTTHHHHHHHHHHTTCEEEEECSSHH
T ss_pred EEEEeeehHHHHHHHHHHHhCCCeEEEEcCCHH
Confidence 699999999999999999999999999998753
No 500
>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*
Probab=94.82 E-value=0.041 Score=41.24 Aligned_cols=39 Identities=13% Similarity=0.095 Sum_probs=31.8
Q ss_pred CCc-ccccEEEECC---CHHHHHHHHHHHhCCCcEEEEecCCC
Q 044609 1 MEM-VEEDVVIIGA---GIAGLATAVALRRLGIKALVLEKSDG 39 (232)
Q Consensus 1 m~~-~~~dV~IvG~---G~~G~~~A~~L~~~g~~v~viE~~~~ 39 (232)
|.. ....++|.|| |-.|..+|..|+++|.+|+++.|+..
T Consensus 1 M~~l~~k~vlVTGas~~~gIG~~~a~~l~~~G~~V~~~~r~~~ 43 (275)
T 2pd4_A 1 MGFLKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNES 43 (275)
T ss_dssp -CTTTTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTT
T ss_pred CCCCCCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 542 3357899998 58999999999999999999998764
Done!