BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 044614
(151 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255571381|ref|XP_002526639.1| polygalacturonase, putative [Ricinus communis]
gi|223534031|gb|EEF35751.1| polygalacturonase, putative [Ricinus communis]
Length = 480
Score = 149 bits (375), Expect = 5e-34, Method: Composition-based stats.
Identities = 84/150 (56%), Positives = 103/150 (68%), Gaps = 14/150 (9%)
Query: 10 SEKLKGNFSRPSWATIVLIVTLITIFSLEITKK--------SVLSPKRVGFSGADGAIFD 61
S L G +R SW+ ++L++T++ + S++IT + S S + GFSG D
Sbjct: 4 SSALMGKLTRLSWSPLILLITVLVLLSIQITTRDFYPICLMSRSSSQPPGFSG------D 57
Query: 62 PDSCAAGLLGDQYLPERKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNV 121
+SCA LG+ LP R+V SI DFGGVGDG TSNTE FRKAVRYMQ F +KGG+QL V
Sbjct: 58 KESCAVFFLGELLLPRREVVRSIVDFGGVGDGKTSNTETFRKAVRYMQRFAEKGGSQLIV 117
Query: 122 PEGLWLTGSFNLTSNFTLFLERGAVMLGSQ 151
P G WLTGSFNLTSNFTLFLE GAV+LGSQ
Sbjct: 118 PRGRWLTGSFNLTSNFTLFLEEGAVILGSQ 147
>gi|4490311|emb|CAB38802.1| putative protein [Arabidopsis thaliana]
gi|7270292|emb|CAB80061.1| putative protein [Arabidopsis thaliana]
Length = 462
Score = 148 bits (374), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 77/135 (57%), Positives = 98/135 (72%), Gaps = 7/135 (5%)
Query: 17 FSRPSWATIVLIVTLITIFSLEITKKSVLSPKRVGFSGADGAIFDPDSCAAGLLGDQYLP 76
+RPSWA ++L+ T++ I SL+I+ S L P + S D DP +C+ G P
Sbjct: 14 ITRPSWAFLLLVFTVLAILSLQISSNSFL-PLWIPTSQYD----DPVTCS-GFFNHDPFP 67
Query: 77 ERKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSN 136
R + MSI DFGGVGDG TSNT AFR+AVR+++GF +GGAQLNVPEG WL+GSFNLTSN
Sbjct: 68 NR-IVMSITDFGGVGDGKTSNTAAFRRAVRHLEGFAAEGGAQLNVPEGTWLSGSFNLTSN 126
Query: 137 FTLFLERGAVMLGSQ 151
FTLFLERGA++LGS+
Sbjct: 127 FTLFLERGALILGSK 141
>gi|22329119|ref|NP_195070.2| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
gi|27754320|gb|AAO22613.1| putative polygalacturonase [Arabidopsis thaliana]
gi|28393881|gb|AAO42348.1| putative polygalacturonase [Arabidopsis thaliana]
gi|332660825|gb|AEE86225.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
Length = 475
Score = 148 bits (374), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 77/135 (57%), Positives = 98/135 (72%), Gaps = 7/135 (5%)
Query: 17 FSRPSWATIVLIVTLITIFSLEITKKSVLSPKRVGFSGADGAIFDPDSCAAGLLGDQYLP 76
+RPSWA ++L+ T++ I SL+I+ S L P + S D DP +C+ G P
Sbjct: 14 ITRPSWAFLLLVFTVLAILSLQISSNSFL-PLWIPTSQYD----DPVTCS-GFFNHDPFP 67
Query: 77 ERKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSN 136
R + MSI DFGGVGDG TSNT AFR+AVR+++GF +GGAQLNVPEG WL+GSFNLTSN
Sbjct: 68 NR-IVMSITDFGGVGDGKTSNTAAFRRAVRHLEGFAAEGGAQLNVPEGTWLSGSFNLTSN 126
Query: 137 FTLFLERGAVMLGSQ 151
FTLFLERGA++LGS+
Sbjct: 127 FTLFLERGALILGSK 141
>gi|225431447|ref|XP_002274138.1| PREDICTED: probable polygalacturonase [Vitis vinifera]
Length = 488
Score = 146 bits (369), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 81/149 (54%), Positives = 102/149 (68%), Gaps = 8/149 (5%)
Query: 8 MKSEKL-----KGNFSRPSWATIVLIVTLITIFSLEITKKSVLSPKRVGFSGADGAIFDP 62
M SEK G F+RPSWA ++L+ ++ + +I K+V P+ V G + I +
Sbjct: 1 MDSEKAWFGAAMGGFTRPSWAFLLLVFIVLVVSCFQIGTKTVF-PRWVVLGGGETGISEE 59
Query: 63 DSCAAGLLGDQYLPERKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVP 122
GL + +P RKV MSI+DFGGVGDG TSNTE FR+A+RYMQ FG+ GG+QLNVP
Sbjct: 60 APSCFGLF--REVPPRKVVMSIRDFGGVGDGVTSNTETFRRAIRYMQSFGNIGGSQLNVP 117
Query: 123 EGLWLTGSFNLTSNFTLFLERGAVMLGSQ 151
G W+TGSFNLTSNFTLFLE GAV+LGSQ
Sbjct: 118 RGRWVTGSFNLTSNFTLFLEEGAVILGSQ 146
>gi|296088539|emb|CBI37530.3| unnamed protein product [Vitis vinifera]
Length = 528
Score = 146 bits (369), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 81/149 (54%), Positives = 102/149 (68%), Gaps = 8/149 (5%)
Query: 8 MKSEKL-----KGNFSRPSWATIVLIVTLITIFSLEITKKSVLSPKRVGFSGADGAIFDP 62
M SEK G F+RPSWA ++L+ ++ + +I K+V P+ V G + I +
Sbjct: 1 MDSEKAWFGAAMGGFTRPSWAFLLLVFIVLVVSCFQIGTKTVF-PRWVVLGGGETGISEE 59
Query: 63 DSCAAGLLGDQYLPERKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVP 122
GL + +P RKV MSI+DFGGVGDG TSNTE FR+A+RYMQ FG+ GG+QLNVP
Sbjct: 60 APSCFGLF--REVPPRKVVMSIRDFGGVGDGVTSNTETFRRAIRYMQSFGNIGGSQLNVP 117
Query: 123 EGLWLTGSFNLTSNFTLFLERGAVMLGSQ 151
G W+TGSFNLTSNFTLFLE GAV+LGSQ
Sbjct: 118 RGRWVTGSFNLTSNFTLFLEEGAVILGSQ 146
>gi|147776708|emb|CAN76963.1| hypothetical protein VITISV_043959 [Vitis vinifera]
Length = 479
Score = 146 bits (368), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 77/137 (56%), Positives = 98/137 (71%), Gaps = 3/137 (2%)
Query: 15 GNFSRPSWATIVLIVTLITIFSLEITKKSVLSPKRVGFSGADGAIFDPDSCAAGLLGDQY 74
G F+RPSWA ++L+ ++ + +I K+V P+ V G + I + GL +
Sbjct: 2 GGFTRPSWAFLLLVFIVLVVSCFQIGTKTVF-PRWVVLGGGETGISEEAPSCFGLF--RE 58
Query: 75 LPERKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLT 134
+P RKV MSI+DFGGVGDG TSNTE FR+A+RYMQ FG+ GG+QLNVP G W+TGSFNLT
Sbjct: 59 VPPRKVVMSIRDFGGVGDGVTSNTETFRRAIRYMQSFGNIGGSQLNVPRGRWVTGSFNLT 118
Query: 135 SNFTLFLERGAVMLGSQ 151
SNFTLFLE GAV+LGSQ
Sbjct: 119 SNFTLFLEEGAVILGSQ 135
>gi|356516364|ref|XP_003526865.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 477
Score = 142 bits (359), Expect = 4e-32, Method: Composition-based stats.
Identities = 75/138 (54%), Positives = 93/138 (67%), Gaps = 8/138 (5%)
Query: 15 GNFSRPSWATIVLIVTLITIFSLEITKKSVLSPKRVGFSGADGAIFDPDSC-AAGLLGDQ 73
G +RPSWA I L+ TL+T +L + + V SG + + AG D
Sbjct: 14 GTCTRPSWALIFLLFTLVTFLTLHLPARPVWF-----LSGLQPGPYPTTTPTCAGFFRD- 67
Query: 74 YLPERKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNL 133
+P RKV +SI+DFGGVGDG TSNTE+FR+A+RYMQ F ++GGAQLN+P G WLTGSFNL
Sbjct: 68 -VPPRKVVLSIEDFGGVGDGKTSNTESFRRAIRYMQRFQNRGGAQLNIPTGTWLTGSFNL 126
Query: 134 TSNFTLFLERGAVMLGSQ 151
TSNFTLFL GAV+L SQ
Sbjct: 127 TSNFTLFLHHGAVILASQ 144
>gi|297802658|ref|XP_002869213.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
gi|297315049|gb|EFH45472.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
Length = 475
Score = 142 bits (358), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 80/148 (54%), Positives = 102/148 (68%), Gaps = 11/148 (7%)
Query: 8 MKSEK----LKGNFSRPSWATIVLIVTLITIFSLEITKKSVLSPKRVGFSGADGAIFDPD 63
M+SEK + +RPS A ++L+ T + I SL+I+ S + P + S DP
Sbjct: 1 MESEKNPTTVLSAITRPSCAFLLLVFTALAILSLQISSNSFI-PIWIPTS----QYHDPV 55
Query: 64 SCAAGLLGDQYLPERKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPE 123
+C+ G P RKV MSI DFGGVGDG TSNTEAFR+AVR+++GF +GGAQLNVP
Sbjct: 56 TCS-GFFNHDPFPNRKV-MSITDFGGVGDGKTSNTEAFRRAVRHLEGFAAEGGAQLNVPM 113
Query: 124 GLWLTGSFNLTSNFTLFLERGAVMLGSQ 151
G WL+GSFNLTSNFTLFL+RGAV+LGS+
Sbjct: 114 GTWLSGSFNLTSNFTLFLQRGAVILGSK 141
>gi|357464681|ref|XP_003602622.1| Germin-like protein [Medicago truncatula]
gi|355491670|gb|AES72873.1| Germin-like protein [Medicago truncatula]
Length = 775
Score = 141 bits (356), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 72/148 (48%), Positives = 102/148 (68%), Gaps = 7/148 (4%)
Query: 8 MKSEK----LKGNFSRPSWATIVLIVTLITIFSLEITKKSVLSPKRVGFSGADGAIFDPD 63
M+SEK + G++++PS + + L T +TI SL+ + +S+ + ++ DP
Sbjct: 1 MESEKTTLMILGSYTKPSCSILFLFFTFLTILSLQFSTRSLFPLSILLSQQPQPSLVDPT 60
Query: 64 SCAAGLLGDQYLPERKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPE 123
+C+ G + +P RK+ SI DFGGVGDG TSNT++F++A+RYMQ F KGG+QLN+P
Sbjct: 61 TCS-GFFNN--VPPRKIIKSIVDFGGVGDGKTSNTQSFQRAIRYMQRFRGKGGSQLNIPN 117
Query: 124 GLWLTGSFNLTSNFTLFLERGAVMLGSQ 151
G WLTGSFNLTS+FTLFL GAV+LGSQ
Sbjct: 118 GTWLTGSFNLTSDFTLFLHHGAVVLGSQ 145
>gi|224096000|ref|XP_002310517.1| predicted protein [Populus trichocarpa]
gi|222853420|gb|EEE90967.1| predicted protein [Populus trichocarpa]
Length = 445
Score = 134 bits (338), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 67/105 (63%), Positives = 79/105 (75%), Gaps = 4/105 (3%)
Query: 49 RVGFSGAD--GAIFDPDSCAAGLLGDQYLPERKVAMSIKDFGGVGDGTTSNTEAFRKAVR 106
++ FS G D + G G+ LPERK MSI++FGGVGDG TSNTE FRKA+R
Sbjct: 2 KIAFSSTSKTGVSADTRTSCVGFFGE--LPERKAVMSIREFGGVGDGKTSNTETFRKAIR 59
Query: 107 YMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFLERGAVMLGSQ 151
Y+Q FG+ GGAQLNVP+G W+TGSFNLTSNFTLFLE GAV+LGSQ
Sbjct: 60 YLQRFGESGGAQLNVPKGRWVTGSFNLTSNFTLFLEEGAVILGSQ 104
>gi|224083446|ref|XP_002307030.1| predicted protein [Populus trichocarpa]
gi|222856479|gb|EEE94026.1| predicted protein [Populus trichocarpa]
Length = 394
Score = 128 bits (321), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 59/70 (84%), Positives = 67/70 (95%)
Query: 82 MSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFL 141
+SIKDFGGVGDG TSNTEAFR+A+RY+QGFG++GGAQLNVPEG W+TGSFNLTSNFTLFL
Sbjct: 1 ISIKDFGGVGDGKTSNTEAFRRAMRYVQGFGERGGAQLNVPEGRWVTGSFNLTSNFTLFL 60
Query: 142 ERGAVMLGSQ 151
E GAV+LGSQ
Sbjct: 61 EEGAVILGSQ 70
>gi|449459262|ref|XP_004147365.1| PREDICTED: probable polygalacturonase-like [Cucumis sativus]
Length = 472
Score = 120 bits (301), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 60/94 (63%), Positives = 71/94 (75%), Gaps = 12/94 (12%)
Query: 58 AIFDPDSCAAGLLGDQYLPERKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGA 117
A F PD+ A V MSI DFGGVGDG TSNTEAFRKA++YM+ FGDKGG+
Sbjct: 58 AFFRPDATAG------------VVMSITDFGGVGDGKTSNTEAFRKAIQYMRRFGDKGGS 105
Query: 118 QLNVPEGLWLTGSFNLTSNFTLFLERGAVMLGSQ 151
+L VP+G W+TGSFNLTSNFTLFL+RGA++L SQ
Sbjct: 106 KLTVPKGSWVTGSFNLTSNFTLFLQRGALILASQ 139
>gi|302767254|ref|XP_002967047.1| hypothetical protein SELMODRAFT_408393 [Selaginella moellendorffii]
gi|300165038|gb|EFJ31646.1| hypothetical protein SELMODRAFT_408393 [Selaginella moellendorffii]
Length = 478
Score = 109 bits (272), Expect = 4e-22, Method: Composition-based stats.
Identities = 53/86 (61%), Positives = 63/86 (73%)
Query: 66 AAGLLGDQYLPERKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGL 125
A G + LP+R ++SI DFG VGDG NT AF+ A+ Y++ F DKGGAQL VP G
Sbjct: 46 APGCCSPRSLPKRPHSVSITDFGAVGDGRIVNTLAFQNAIFYLKSFADKGGAQLYVPRGR 105
Query: 126 WLTGSFNLTSNFTLFLERGAVMLGSQ 151
WLTGSFNLTS+ TLFLE GAV+LGSQ
Sbjct: 106 WLTGSFNLTSHLTLFLEEGAVILGSQ 131
>gi|296083315|emb|CBI22951.3| unnamed protein product [Vitis vinifera]
Length = 482
Score = 105 bits (262), Expect = 6e-21, Method: Composition-based stats.
Identities = 51/77 (66%), Positives = 60/77 (77%)
Query: 75 LPERKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLT 134
L R ++SI +FG VGDG T NT AF+ A+ Y++ F DKGGAQL VP G WLTGSFNLT
Sbjct: 32 LDPRPHSVSILEFGAVGDGKTLNTIAFQNAIFYLKSFADKGGAQLYVPPGKWLTGSFNLT 91
Query: 135 SNFTLFLERGAVMLGSQ 151
S+ TLFLERGAV+LGSQ
Sbjct: 92 SHLTLFLERGAVILGSQ 108
>gi|297743929|emb|CBI36899.3| unnamed protein product [Vitis vinifera]
Length = 477
Score = 105 bits (262), Expect = 7e-21, Method: Composition-based stats.
Identities = 51/77 (66%), Positives = 59/77 (76%)
Query: 75 LPERKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLT 134
L R ++SI +FG VGDG TSNT AF A+ Y++ F DKGGAQL VP G WLTGSFNLT
Sbjct: 55 LEPRPHSVSILEFGAVGDGKTSNTIAFENAIFYLKSFADKGGAQLYVPPGRWLTGSFNLT 114
Query: 135 SNFTLFLERGAVMLGSQ 151
S+ TLFLERGA +LGSQ
Sbjct: 115 SHLTLFLERGATILGSQ 131
>gi|242077899|ref|XP_002443718.1| hypothetical protein SORBIDRAFT_07g000740 [Sorghum bicolor]
gi|241940068|gb|EES13213.1| hypothetical protein SORBIDRAFT_07g000740 [Sorghum bicolor]
Length = 497
Score = 105 bits (262), Expect = 7e-21, Method: Composition-based stats.
Identities = 53/89 (59%), Positives = 61/89 (68%), Gaps = 2/89 (2%)
Query: 63 DSCAAGLLGDQYLPERKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVP 122
DSCA G P R V S+++FG VGDG T NT AFR+AV ++ GGA+L VP
Sbjct: 78 DSCAGFYAGAG--PSRAVTASVEEFGAVGDGATPNTAAFRRAVAELEARAGAGGARLEVP 135
Query: 123 EGLWLTGSFNLTSNFTLFLERGAVMLGSQ 151
G WLTGSFNLTS FTLFL RGAV+LGSQ
Sbjct: 136 PGRWLTGSFNLTSRFTLFLHRGAVILGSQ 164
>gi|225437457|ref|XP_002269037.1| PREDICTED: probable polygalacturonase-like [Vitis vinifera]
Length = 542
Score = 105 bits (261), Expect = 9e-21, Method: Composition-based stats.
Identities = 51/77 (66%), Positives = 59/77 (76%)
Query: 75 LPERKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLT 134
L R ++SI +FG VGDG TSNT AF A+ Y++ F DKGGAQL VP G WLTGSFNLT
Sbjct: 120 LEPRPHSVSILEFGAVGDGKTSNTIAFENAIFYLKSFADKGGAQLYVPPGRWLTGSFNLT 179
Query: 135 SNFTLFLERGAVMLGSQ 151
S+ TLFLERGA +LGSQ
Sbjct: 180 SHLTLFLERGATILGSQ 196
>gi|225431820|ref|XP_002273305.1| PREDICTED: probable polygalacturonase-like [Vitis vinifera]
Length = 457
Score = 104 bits (260), Expect = 1e-20, Method: Composition-based stats.
Identities = 51/77 (66%), Positives = 60/77 (77%)
Query: 75 LPERKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLT 134
L R ++SI +FG VGDG T NT AF+ A+ Y++ F DKGGAQL VP G WLTGSFNLT
Sbjct: 34 LDPRPHSVSILEFGAVGDGKTLNTIAFQNAIFYLKSFADKGGAQLYVPPGKWLTGSFNLT 93
Query: 135 SNFTLFLERGAVMLGSQ 151
S+ TLFLERGAV+LGSQ
Sbjct: 94 SHLTLFLERGAVILGSQ 110
>gi|388512935|gb|AFK44529.1| unknown [Lotus japonicus]
Length = 469
Score = 103 bits (258), Expect = 2e-20, Method: Composition-based stats.
Identities = 46/74 (62%), Positives = 58/74 (78%)
Query: 78 RKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNF 137
R + S+ DFGGVGDGTT NT+AFRKA+ ++ + GG+QL VP G WLTGSFNLTS+F
Sbjct: 39 RAYSASVTDFGGVGDGTTLNTQAFRKAIEHLSQYSSNGGSQLYVPPGRWLTGSFNLTSHF 98
Query: 138 TLFLERGAVMLGSQ 151
TLF+ + AV+LGSQ
Sbjct: 99 TLFIHKDAVILGSQ 112
>gi|356558153|ref|XP_003547372.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 579
Score = 103 bits (256), Expect = 3e-20, Method: Composition-based stats.
Identities = 48/77 (62%), Positives = 60/77 (77%)
Query: 75 LPERKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLT 134
L R ++SI +FG VGDG T NT AF+ A+ Y++ F DKGGAQL VP G WLTGSFNLT
Sbjct: 157 LDPRPHSVSILEFGAVGDGKTLNTIAFQNAIFYLKSFADKGGAQLYVPPGKWLTGSFNLT 216
Query: 135 SNFTLFLERGAVMLGSQ 151
S+ TLFLE+GAV++G+Q
Sbjct: 217 SHLTLFLEKGAVIIGTQ 233
>gi|30679999|ref|NP_850525.1| polygalacturonase-like protein [Arabidopsis thaliana]
gi|20260262|gb|AAM13029.1| unknown protein [Arabidopsis thaliana]
gi|22136514|gb|AAM91335.1| unknown protein [Arabidopsis thaliana]
gi|332640935|gb|AEE74456.1| polygalacturonase-like protein [Arabidopsis thaliana]
Length = 446
Score = 103 bits (256), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 63/123 (51%), Positives = 78/123 (63%), Gaps = 11/123 (8%)
Query: 29 VTLITIFSLEITKKSVLSPKRVGFSGADGAIFDPDSCAAGLLGDQYLPERKVAMSIKDFG 88
++++TI L +T SV+ P GA G I D LG + L R ++SI DFG
Sbjct: 1 MSVVTILILALT--SVI-PIYANVHGA-GKICDE-------LGRRSLSTRPHSVSITDFG 49
Query: 89 GVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFLERGAVML 148
VGDG T NT AF+ AV Y+ F DKGGAQL VP G WLTGSF+LTS+ TLFLE GAV++
Sbjct: 50 AVGDGKTLNTLAFQNAVFYLMSFADKGGAQLYVPPGHWLTGSFSLTSHLTLFLENGAVIV 109
Query: 149 GSQ 151
SQ
Sbjct: 110 ASQ 112
>gi|356564613|ref|XP_003550546.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 460
Score = 102 bits (253), Expect = 8e-20, Method: Composition-based stats.
Identities = 49/77 (63%), Positives = 58/77 (75%)
Query: 75 LPERKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLT 134
L R +SI +FG VGDG T NT AF+ A+ Y++ F DKGGAQL VP G WLT SFNLT
Sbjct: 43 LKPRPHTVSILEFGAVGDGKTLNTIAFQNAIFYLKSFADKGGAQLYVPPGTWLTQSFNLT 102
Query: 135 SNFTLFLERGAVMLGSQ 151
S+ TLFLE+GAV+LGSQ
Sbjct: 103 SHLTLFLEKGAVILGSQ 119
>gi|388499792|gb|AFK37962.1| unknown [Lotus japonicus]
Length = 469
Score = 101 bits (252), Expect = 8e-20, Method: Composition-based stats.
Identities = 45/74 (60%), Positives = 57/74 (77%)
Query: 78 RKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNF 137
R + S+ DFGGVGDGTT NT+AFRKA+ ++ + GG+QL VP G WLTGS NLTS+F
Sbjct: 39 RAYSASVTDFGGVGDGTTLNTQAFRKAIEHLSQYSSNGGSQLYVPPGRWLTGSLNLTSHF 98
Query: 138 TLFLERGAVMLGSQ 151
TLF+ + AV+LGSQ
Sbjct: 99 TLFIHKDAVILGSQ 112
>gi|302755072|ref|XP_002960960.1| hypothetical protein SELMODRAFT_33152 [Selaginella moellendorffii]
gi|300171899|gb|EFJ38499.1| hypothetical protein SELMODRAFT_33152 [Selaginella moellendorffii]
Length = 393
Score = 101 bits (252), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 49/74 (66%), Positives = 57/74 (77%)
Query: 78 RKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNF 137
R ++SI DFG VGDG NT AF+ A+ Y++ F DKGGAQL VP G WLTGSFNLTS+
Sbjct: 1 RPHSVSITDFGAVGDGRIVNTLAFQNAIFYLKSFADKGGAQLYVPRGRWLTGSFNLTSHL 60
Query: 138 TLFLERGAVMLGSQ 151
TLFLE GAV+LGSQ
Sbjct: 61 TLFLEEGAVILGSQ 74
>gi|148909907|gb|ABR18040.1| unknown [Picea sitchensis]
Length = 472
Score = 101 bits (252), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 46/74 (62%), Positives = 58/74 (78%)
Query: 78 RKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNF 137
R ++SI +FGGVGDGTT NTEAFRKA+ ++ F + GG QL +P G WLTGSFNLT +F
Sbjct: 42 RAQSVSIAEFGGVGDGTTVNTEAFRKAIEHLSEFSETGGGQLYIPPGRWLTGSFNLTDHF 101
Query: 138 TLFLERGAVMLGSQ 151
TL+L + AV+LGSQ
Sbjct: 102 TLYLHKEAVILGSQ 115
>gi|356529330|ref|XP_003533248.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 452
Score = 101 bits (252), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 48/77 (62%), Positives = 60/77 (77%)
Query: 75 LPERKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLT 134
L R ++SI +FG VGDG T NT AF+ A+ Y++ F DKGGAQL VP G WLTGSFNLT
Sbjct: 30 LDPRPHSVSILEFGAVGDGKTLNTIAFQNAIFYLKSFADKGGAQLYVPPGKWLTGSFNLT 89
Query: 135 SNFTLFLERGAVMLGSQ 151
S+ TLFLE+GAV++G+Q
Sbjct: 90 SHLTLFLEKGAVLIGTQ 106
>gi|79330402|ref|NP_001032043.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
gi|110739511|dbj|BAF01664.1| hypothetical protein [Arabidopsis thaliana]
gi|332008402|gb|AED95785.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
Length = 447
Score = 101 bits (251), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 49/75 (65%), Positives = 57/75 (76%)
Query: 77 ERKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSN 136
ER ++ I DFG VGDG T NT AF+ AV Y++ F DKGGAQL VP G WLTGSFNLTS+
Sbjct: 36 ERPHSVKITDFGAVGDGKTLNTLAFQNAVFYLKSFADKGGAQLYVPPGRWLTGSFNLTSH 95
Query: 137 FTLFLERGAVMLGSQ 151
TLFLE+ AV+L SQ
Sbjct: 96 LTLFLEKDAVILASQ 110
>gi|449456478|ref|XP_004145976.1| PREDICTED: probable polygalacturonase-like [Cucumis sativus]
Length = 480
Score = 101 bits (251), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 49/88 (55%), Positives = 59/88 (67%)
Query: 64 SCAAGLLGDQYLPERKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPE 123
SC L + RK I DFGGVGDG TSNT+AFR+A+ ++ GGAQL VP
Sbjct: 36 SCPTNYLQVPAISCRKHTALITDFGGVGDGVTSNTQAFRRAIEHLSSLAADGGAQLTVPP 95
Query: 124 GLWLTGSFNLTSNFTLFLERGAVMLGSQ 151
G WLTGSFNLTS+FTLF+ + A +LGSQ
Sbjct: 96 GKWLTGSFNLTSHFTLFVHKDAKILGSQ 123
>gi|297792177|ref|XP_002863973.1| polygalacturonase [Arabidopsis lyrata subsp. lyrata]
gi|297309808|gb|EFH40232.1| polygalacturonase [Arabidopsis lyrata subsp. lyrata]
Length = 447
Score = 101 bits (251), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 49/75 (65%), Positives = 57/75 (76%)
Query: 77 ERKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSN 136
ER ++ I DFG VGDG T NT AF+ AV Y++ F DKGGAQL VP G WLTGSFNLTS+
Sbjct: 36 ERPHSVKITDFGAVGDGETLNTLAFQNAVFYLKSFADKGGAQLYVPPGRWLTGSFNLTSH 95
Query: 137 FTLFLERGAVMLGSQ 151
TLFLE+ AV+L SQ
Sbjct: 96 LTLFLEKDAVILASQ 110
>gi|22327662|ref|NP_680409.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
gi|20258821|gb|AAM14020.1| unknown protein [Arabidopsis thaliana]
gi|22136814|gb|AAM91751.1| unknown protein [Arabidopsis thaliana]
gi|332008401|gb|AED95784.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
Length = 449
Score = 101 bits (251), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 49/75 (65%), Positives = 57/75 (76%)
Query: 77 ERKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSN 136
ER ++ I DFG VGDG T NT AF+ AV Y++ F DKGGAQL VP G WLTGSFNLTS+
Sbjct: 38 ERPHSVKITDFGAVGDGKTLNTLAFQNAVFYLKSFADKGGAQLYVPPGRWLTGSFNLTSH 97
Query: 137 FTLFLERGAVMLGSQ 151
TLFLE+ AV+L SQ
Sbjct: 98 LTLFLEKDAVILASQ 112
>gi|449497436|ref|XP_004160401.1| PREDICTED: LOW QUALITY PROTEIN: probable polygalacturonase-like
[Cucumis sativus]
Length = 480
Score = 100 bits (250), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 49/88 (55%), Positives = 59/88 (67%)
Query: 64 SCAAGLLGDQYLPERKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPE 123
SC L + RK I DFGGVGDG TSNT+AFR+A+ ++ GGAQL VP
Sbjct: 36 SCPTNYLQVPAISCRKHTALITDFGGVGDGVTSNTQAFRRAIEHLSSLAADGGAQLTVPX 95
Query: 124 GLWLTGSFNLTSNFTLFLERGAVMLGSQ 151
G WLTGSFNLTS+FTLF+ + A +LGSQ
Sbjct: 96 GKWLTGSFNLTSHFTLFVHKDAKILGSQ 123
>gi|356519942|ref|XP_003528627.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 449
Score = 100 bits (250), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 49/77 (63%), Positives = 58/77 (75%)
Query: 75 LPERKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLT 134
L R +SI +FG VGDG T NT AF+ A+ Y++ F DKGGAQL VP G WLT SFNLT
Sbjct: 32 LKPRPHTVSILEFGAVGDGKTLNTMAFQNAIFYLKSFADKGGAQLYVPPGTWLTQSFNLT 91
Query: 135 SNFTLFLERGAVMLGSQ 151
S+ TLFLE+GAV+LGSQ
Sbjct: 92 SHLTLFLEKGAVILGSQ 108
>gi|357509171|ref|XP_003624874.1| hypothetical protein MTR_7g088550 [Medicago truncatula]
gi|355499889|gb|AES81092.1| hypothetical protein MTR_7g088550 [Medicago truncatula]
Length = 476
Score = 100 bits (250), Expect = 2e-19, Method: Composition-based stats.
Identities = 47/74 (63%), Positives = 58/74 (78%)
Query: 78 RKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNF 137
RK + + DFGGVGDG TSNT+AF A+ + + + GGAQL VP G WLTGSFNLTS+F
Sbjct: 46 RKHSAVLTDFGGVGDGKTSNTKAFNTAITKLSQYANDGGAQLIVPPGKWLTGSFNLTSHF 105
Query: 138 TLFLERGAVMLGSQ 151
TLFL++GAV+LGSQ
Sbjct: 106 TLFLQKGAVILGSQ 119
>gi|449432886|ref|XP_004134229.1| PREDICTED: probable polygalacturonase-like [Cucumis sativus]
Length = 457
Score = 100 bits (250), Expect = 2e-19, Method: Composition-based stats.
Identities = 49/77 (63%), Positives = 59/77 (76%)
Query: 75 LPERKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLT 134
L R ++SI +FG VGDG T NT AF+ A+ Y++ F DKGGAQL VP G WLTGS NLT
Sbjct: 35 LDPRPHSVSILEFGAVGDGKTLNTIAFQNAIFYLKSFADKGGAQLYVPPGKWLTGSINLT 94
Query: 135 SNFTLFLERGAVMLGSQ 151
S+ TLFLE+GAV+LGSQ
Sbjct: 95 SHLTLFLEKGAVILGSQ 111
>gi|297833452|ref|XP_002884608.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
gi|297330448|gb|EFH60867.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
Length = 446
Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 51/82 (62%), Positives = 59/82 (71%)
Query: 70 LGDQYLPERKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTG 129
LG L R ++SI DFG VGDG T NT AF+ AV Y+ F DKGGAQL VP G WLTG
Sbjct: 31 LGRISLSTRPHSVSITDFGAVGDGKTLNTLAFQNAVFYLMSFADKGGAQLYVPPGNWLTG 90
Query: 130 SFNLTSNFTLFLERGAVMLGSQ 151
SF+LTS+ TLFLE GAV++ SQ
Sbjct: 91 SFSLTSHLTLFLENGAVIVASQ 112
>gi|255551873|ref|XP_002516982.1| Polygalacturonase, putative [Ricinus communis]
gi|223544070|gb|EEF45596.1| Polygalacturonase, putative [Ricinus communis]
Length = 454
Score = 100 bits (249), Expect = 2e-19, Method: Composition-based stats.
Identities = 48/77 (62%), Positives = 60/77 (77%)
Query: 75 LPERKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLT 134
L R ++SI +FG VGDG T NT +F+ A+ Y++ F DKGGA+L VP G WLTGSFNLT
Sbjct: 32 LDPRPHSVSILEFGAVGDGKTLNTISFQNAIFYLKSFADKGGAKLYVPPGRWLTGSFNLT 91
Query: 135 SNFTLFLERGAVMLGSQ 151
S+ TLFLE+GAV+LGSQ
Sbjct: 92 SHLTLFLEKGAVILGSQ 108
>gi|125559874|gb|EAZ05322.1| hypothetical protein OsI_27527 [Oryza sativa Indica Group]
Length = 482
Score = 100 bits (249), Expect = 2e-19, Method: Composition-based stats.
Identities = 50/91 (54%), Positives = 61/91 (67%), Gaps = 1/91 (1%)
Query: 61 DPDSCAAGLLGDQYLPERKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLN 120
D DSCA G R + S+++FG VGDG TSNT AFR+AV ++ GGA+L
Sbjct: 60 DRDSCAGFYRGGSS-GRRAASASVEEFGAVGDGVTSNTAAFRRAVAALEARAGGGGARLE 118
Query: 121 VPEGLWLTGSFNLTSNFTLFLERGAVMLGSQ 151
VP G W+TGSFNLTS FTLFL GA++LGSQ
Sbjct: 119 VPPGRWVTGSFNLTSRFTLFLHHGAIILGSQ 149
>gi|357478841|ref|XP_003609706.1| hypothetical protein MTR_4g120730 [Medicago truncatula]
gi|355510761|gb|AES91903.1| hypothetical protein MTR_4g120730 [Medicago truncatula]
Length = 459
Score = 100 bits (249), Expect = 2e-19, Method: Composition-based stats.
Identities = 48/77 (62%), Positives = 59/77 (76%)
Query: 75 LPERKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLT 134
L R ++SI +FG VGDG T NT AF+ A+ Y++ F DKGGAQL VP G WLT SFNLT
Sbjct: 33 LKPRPHSVSILEFGAVGDGKTLNTIAFQNAIFYLKSFADKGGAQLYVPPGTWLTQSFNLT 92
Query: 135 SNFTLFLERGAVMLGSQ 151
S+ TLFLE+GAV++GSQ
Sbjct: 93 SHLTLFLEKGAVIIGSQ 109
>gi|115474399|ref|NP_001060796.1| Os08g0107300 [Oryza sativa Japonica Group]
gi|42408232|dbj|BAD09389.1| putative exo-poly-alpha-D-galacturonosidase precursor [Oryza sativa
Japonica Group]
gi|113622765|dbj|BAF22710.1| Os08g0107300 [Oryza sativa Japonica Group]
Length = 482
Score = 100 bits (248), Expect = 2e-19, Method: Composition-based stats.
Identities = 50/91 (54%), Positives = 61/91 (67%), Gaps = 1/91 (1%)
Query: 61 DPDSCAAGLLGDQYLPERKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLN 120
D DSCA G R + S+++FG VGDG TSNT AFR+AV ++ GGA+L
Sbjct: 60 DRDSCAGFYRGGSS-GRRAASASVEEFGAVGDGVTSNTAAFRRAVAALEARAGGGGARLE 118
Query: 121 VPEGLWLTGSFNLTSNFTLFLERGAVMLGSQ 151
VP G W+TGSFNLTS FTLFL GA++LGSQ
Sbjct: 119 VPPGRWVTGSFNLTSRFTLFLHHGAIILGSQ 149
>gi|125601928|gb|EAZ41253.1| hypothetical protein OsJ_25761 [Oryza sativa Japonica Group]
Length = 482
Score = 100 bits (248), Expect = 3e-19, Method: Composition-based stats.
Identities = 50/91 (54%), Positives = 61/91 (67%), Gaps = 1/91 (1%)
Query: 61 DPDSCAAGLLGDQYLPERKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLN 120
D DSCA G R + S+++FG VGDG TSNT AFR+AV ++ GGA+L
Sbjct: 60 DRDSCAGFYRGGSS-GRRAASASVEEFGAVGDGVTSNTAAFRRAVAALEARAGGGGARLE 118
Query: 121 VPEGLWLTGSFNLTSNFTLFLERGAVMLGSQ 151
VP G W+TGSFNLTS FTLFL GA++LGSQ
Sbjct: 119 VPPGRWVTGSFNLTSRFTLFLHHGAIILGSQ 149
>gi|224107034|ref|XP_002314352.1| predicted protein [Populus trichocarpa]
gi|222863392|gb|EEF00523.1| predicted protein [Populus trichocarpa]
Length = 435
Score = 99.8 bits (247), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 49/77 (63%), Positives = 60/77 (77%)
Query: 75 LPERKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLT 134
L R ++SI +FG VGDG T NT AF+ A+ Y++ F DKGGAQL VP G WLTGSF+LT
Sbjct: 32 LKPRPHSVSILEFGAVGDGKTLNTLAFQNAIFYLKSFTDKGGAQLYVPPGKWLTGSFSLT 91
Query: 135 SNFTLFLERGAVMLGSQ 151
S+ TLFLE+GAV+LGSQ
Sbjct: 92 SHLTLFLEKGAVILGSQ 108
>gi|356503915|ref|XP_003520745.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 497
Score = 99.8 bits (247), Expect = 4e-19, Method: Composition-based stats.
Identities = 47/74 (63%), Positives = 57/74 (77%)
Query: 78 RKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNF 137
R ++SI +FG VGDG T NT AF A+ Y++ F DKGGAQL VP G WLTGSFNLTS+
Sbjct: 58 RPHSVSILEFGAVGDGITLNTVAFENAMFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHL 117
Query: 138 TLFLERGAVMLGSQ 151
TLFLERGA+++ SQ
Sbjct: 118 TLFLERGAIIIASQ 131
>gi|356570982|ref|XP_003553661.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 527
Score = 99.4 bits (246), Expect = 4e-19, Method: Composition-based stats.
Identities = 47/77 (61%), Positives = 57/77 (74%)
Query: 75 LPERKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLT 134
L R ++SI +FG VGDG T NT AF A+ Y++ F DKGGAQL VP G WLTGSFNLT
Sbjct: 100 LKARPHSVSILEFGAVGDGITLNTVAFENAIFYLKSFADKGGAQLYVPSGTWLTGSFNLT 159
Query: 135 SNFTLFLERGAVMLGSQ 151
++ TLFLERGA ++ SQ
Sbjct: 160 NHLTLFLERGATIIASQ 176
>gi|224130360|ref|XP_002328589.1| predicted protein [Populus trichocarpa]
gi|222838571|gb|EEE76936.1| predicted protein [Populus trichocarpa]
Length = 450
Score = 99.0 bits (245), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 48/77 (62%), Positives = 60/77 (77%)
Query: 75 LPERKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLT 134
L R ++SI +FG VGDG T NT AF+ A+ Y++ F DKGGAQL VP G WLTGSF+LT
Sbjct: 34 LKPRPHSVSILEFGAVGDGKTLNTLAFQNAIFYLKSFTDKGGAQLYVPPGKWLTGSFSLT 93
Query: 135 SNFTLFLERGAVMLGSQ 151
S+ TLF+E+GAV+LGSQ
Sbjct: 94 SHLTLFVEKGAVILGSQ 110
>gi|242071887|ref|XP_002451220.1| hypothetical protein SORBIDRAFT_05g025980 [Sorghum bicolor]
gi|241937063|gb|EES10208.1| hypothetical protein SORBIDRAFT_05g025980 [Sorghum bicolor]
Length = 448
Score = 99.0 bits (245), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 49/87 (56%), Positives = 64/87 (73%), Gaps = 1/87 (1%)
Query: 66 AAGLLGDQYLP-ERKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEG 124
A G L DQ P R +++I +FG VGDG T NT F+ AV Y++ F DKGGAQL VP G
Sbjct: 17 ARGELRDQAPPGSRPHSVTITEFGAVGDGRTLNTVPFQNAVFYVRSFADKGGAQLYVPRG 76
Query: 125 LWLTGSFNLTSNFTLFLERGAVMLGSQ 151
WLTGSFNLTS+ T++LE+GAV++G++
Sbjct: 77 RWLTGSFNLTSHLTIYLEQGAVIVGAK 103
>gi|449531087|ref|XP_004172519.1| PREDICTED: LOW QUALITY PROTEIN: probable polygalacturonase-like,
partial [Cucumis sativus]
Length = 452
Score = 98.6 bits (244), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 48/77 (62%), Positives = 58/77 (75%)
Query: 75 LPERKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLT 134
L R ++SI +FG VGDG T NT AF+ A+ Y++ F DKGGAQL VP G WLTGS NLT
Sbjct: 30 LDPRPHSVSILEFGAVGDGKTLNTIAFQNAIFYLKSFADKGGAQLYVPPGKWLTGSINLT 89
Query: 135 SNFTLFLERGAVMLGSQ 151
S+ TLFL +GAV+LGSQ
Sbjct: 90 SHLTLFLXKGAVILGSQ 106
>gi|356547950|ref|XP_003542367.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 491
Score = 98.6 bits (244), Expect = 9e-19, Method: Composition-based stats.
Identities = 46/72 (63%), Positives = 54/72 (75%)
Query: 78 RKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNF 137
R +A ++ DFGGVGDG T NTEAF++AV + FG KGGAQLNVP G WLT FNLTS+
Sbjct: 69 RPMAFNLTDFGGVGDGVTLNTEAFKRAVSAVSKFGKKGGAQLNVPPGRWLTAPFNLTSHM 128
Query: 138 TLFLERGAVMLG 149
TLFL AV+LG
Sbjct: 129 TLFLAEDAVILG 140
>gi|356501888|ref|XP_003519755.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 455
Score = 98.2 bits (243), Expect = 9e-19, Method: Composition-based stats.
Identities = 48/80 (60%), Positives = 59/80 (73%)
Query: 72 DQYLPERKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSF 131
++ L R ++SI +FG VGDG T NT AF+ AV Y + F DKGGA+L VP G WLTGSF
Sbjct: 30 EKVLDPRPHSVSILEFGAVGDGKTLNTVAFQNAVFYAKSFADKGGAKLYVPSGKWLTGSF 89
Query: 132 NLTSNFTLFLERGAVMLGSQ 151
NLTS+ TLFLERGA ++ SQ
Sbjct: 90 NLTSHLTLFLERGATIIASQ 109
>gi|413916538|gb|AFW56470.1| polygalacturonase [Zea mays]
Length = 458
Score = 98.2 bits (243), Expect = 9e-19, Method: Composition-based stats.
Identities = 44/71 (61%), Positives = 57/71 (80%)
Query: 81 AMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLF 140
+++I +FG VGDG T NT +F+ AV Y++ F DKGGAQL +P G WLTGSFNLTS+ TLF
Sbjct: 40 SVTITEFGAVGDGVTLNTVSFQNAVFYLRSFADKGGAQLYIPRGRWLTGSFNLTSHLTLF 99
Query: 141 LERGAVMLGSQ 151
LE GAV++G+Q
Sbjct: 100 LESGAVIVGTQ 110
>gi|226507254|ref|NP_001148987.1| polygalacturonase precursor [Zea mays]
gi|195623798|gb|ACG33729.1| polygalacturonase [Zea mays]
Length = 458
Score = 98.2 bits (243), Expect = 9e-19, Method: Composition-based stats.
Identities = 44/71 (61%), Positives = 57/71 (80%)
Query: 81 AMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLF 140
+++I +FG VGDG T NT +F+ AV Y++ F DKGGAQL +P G WLTGSFNLTS+ TLF
Sbjct: 40 SVTITEFGAVGDGVTLNTVSFQNAVFYLRSFADKGGAQLYIPRGRWLTGSFNLTSHLTLF 99
Query: 141 LERGAVMLGSQ 151
LE GAV++G+Q
Sbjct: 100 LESGAVIVGTQ 110
>gi|357507519|ref|XP_003624048.1| Polygalacturonase [Medicago truncatula]
gi|355499063|gb|AES80266.1| Polygalacturonase [Medicago truncatula]
Length = 483
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 44/74 (59%), Positives = 59/74 (79%)
Query: 78 RKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNF 137
R + S+ DFGGVGDG TSNT+AF+ A+ ++ +G +GG+QL VP G WLTGSF+LTS+F
Sbjct: 51 RAHSASLTDFGGVGDGNTSNTKAFQSAISHLSQYGSQGGSQLYVPAGKWLTGSFSLTSHF 110
Query: 138 TLFLERGAVMLGSQ 151
TL+L+R AV+L SQ
Sbjct: 111 TLYLDRDAVLLASQ 124
>gi|15228881|ref|NP_188308.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
gi|14334802|gb|AAK59579.1| putative polygalacturonase [Arabidopsis thaliana]
gi|21280835|gb|AAM44924.1| putative polygalacturonase [Arabidopsis thaliana]
gi|332642352|gb|AEE75873.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
Length = 455
Score = 97.4 bits (241), Expect = 2e-18, Method: Composition-based stats.
Identities = 48/76 (63%), Positives = 57/76 (75%)
Query: 75 LPERKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLT 134
L R ++SI +FG VGDG T NT AF+ AV Y++ F DKGGAQL VP G WLTGSFNLT
Sbjct: 33 LDPRPHSVSILEFGAVGDGKTLNTIAFQNAVFYLKSFADKGGAQLYVPPGKWLTGSFNLT 92
Query: 135 SNFTLFLERGAVMLGS 150
S+ TLFLE+GA +L S
Sbjct: 93 SHLTLFLEKGATILAS 108
>gi|356565754|ref|XP_003551102.1| PREDICTED: probable polygalacturonase-like isoform 1 [Glycine max]
Length = 492
Score = 97.4 bits (241), Expect = 2e-18, Method: Composition-based stats.
Identities = 46/72 (63%), Positives = 53/72 (73%)
Query: 78 RKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNF 137
R +A ++ DFGGVGDG T NTEAF +AV + FG KGGAQLNVP G WLT FNLTS+
Sbjct: 70 RPMAFNLTDFGGVGDGVTLNTEAFERAVSAVSKFGKKGGAQLNVPPGRWLTAPFNLTSHM 129
Query: 138 TLFLERGAVMLG 149
TLFL AV+LG
Sbjct: 130 TLFLAEDAVILG 141
>gi|388509890|gb|AFK43011.1| unknown [Medicago truncatula]
Length = 483
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 44/74 (59%), Positives = 59/74 (79%)
Query: 78 RKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNF 137
R + S+ DFGGVGDG TSNT+AF+ A+ ++ +G +GG+QL VP G WLTGSF+LTS+F
Sbjct: 51 RAHSASLTDFGGVGDGNTSNTKAFQSAISHLSQYGSQGGSQLYVPAGKWLTGSFSLTSHF 110
Query: 138 TLFLERGAVMLGSQ 151
TL+L+R AV+L SQ
Sbjct: 111 TLYLDRDAVLLASQ 124
>gi|356522584|ref|XP_003529926.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 498
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 44/74 (59%), Positives = 57/74 (77%)
Query: 78 RKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNF 137
R + S+ DFGGVGDG TSNT+AF+ A+ Y+ + KGGAQL VP G WLTGSF++TS+F
Sbjct: 66 RAHSASLTDFGGVGDGNTSNTKAFQSAISYLSQYASKGGAQLYVPAGKWLTGSFSMTSHF 125
Query: 138 TLFLERGAVMLGSQ 151
TL+L + AV+L SQ
Sbjct: 126 TLYLNKDAVLLASQ 139
>gi|21553827|gb|AAM62920.1| polygalacturonase, putative [Arabidopsis thaliana]
Length = 453
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 48/76 (63%), Positives = 57/76 (75%)
Query: 75 LPERKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLT 134
L R ++SI +FG VGDG T NT AF+ AV Y++ F DKGGAQL VP G WLTGSFNLT
Sbjct: 31 LDPRPHSVSILEFGAVGDGKTLNTIAFQNAVFYLKSFADKGGAQLYVPPGKWLTGSFNLT 90
Query: 135 SNFTLFLERGAVMLGS 150
S+ TLFLE+GA +L S
Sbjct: 91 SHLTLFLEKGATILAS 106
>gi|7939578|dbj|BAA95779.1| polygalacturonase-like protein [Arabidopsis thaliana]
Length = 453
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 48/76 (63%), Positives = 57/76 (75%)
Query: 75 LPERKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLT 134
L R ++SI +FG VGDG T NT AF+ AV Y++ F DKGGAQL VP G WLTGSFNLT
Sbjct: 31 LDPRPHSVSILEFGAVGDGKTLNTIAFQNAVFYLKSFADKGGAQLYVPPGKWLTGSFNLT 90
Query: 135 SNFTLFLERGAVMLGS 150
S+ TLFLE+GA +L S
Sbjct: 91 SHLTLFLEKGATILAS 106
>gi|297742230|emb|CBI34379.3| unnamed protein product [Vitis vinifera]
Length = 433
Score = 97.1 bits (240), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 45/74 (60%), Positives = 57/74 (77%)
Query: 78 RKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNF 137
R + S+ DFGGVGDGTTSNT+AF+ A+ ++ F GG+QL VP G WLTGSFNLTS+F
Sbjct: 49 RAHSASLTDFGGVGDGTTSNTKAFQAAIDHLSQFASDGGSQLFVPPGRWLTGSFNLTSHF 108
Query: 138 TLFLERGAVMLGSQ 151
TL+L + AV+L SQ
Sbjct: 109 TLYLHKDAVLLASQ 122
>gi|356534963|ref|XP_003536020.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 456
Score = 97.1 bits (240), Expect = 2e-18, Method: Composition-based stats.
Identities = 47/74 (63%), Positives = 56/74 (75%)
Query: 78 RKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNF 137
R ++SI +FG VGDG T NT AF+ AV Y + F DKGGA+L VP G WLTGSFNLTS+
Sbjct: 36 RPHSVSILEFGAVGDGKTLNTVAFQNAVFYAKSFADKGGAKLYVPSGKWLTGSFNLTSHL 95
Query: 138 TLFLERGAVMLGSQ 151
TLFLERGA ++ SQ
Sbjct: 96 TLFLERGATIIASQ 109
>gi|449432134|ref|XP_004133855.1| PREDICTED: probable polygalacturonase-like [Cucumis sativus]
Length = 493
Score = 97.1 bits (240), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 47/74 (63%), Positives = 55/74 (74%)
Query: 78 RKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNF 137
R SI +FGGVGDG TSNT+AF+ AV + + D GGAQL VP G WLTGSFNLTS+F
Sbjct: 62 RAHTASITEFGGVGDGVTSNTKAFQAAVEQLSQYTDDGGAQLYVPAGKWLTGSFNLTSHF 121
Query: 138 TLFLERGAVMLGSQ 151
TLFL + AV+L SQ
Sbjct: 122 TLFLHQDAVLLASQ 135
>gi|449530307|ref|XP_004172137.1| PREDICTED: probable polygalacturonase-like [Cucumis sativus]
Length = 493
Score = 97.1 bits (240), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 47/74 (63%), Positives = 55/74 (74%)
Query: 78 RKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNF 137
R SI +FGGVGDG TSNT+AF+ AV + + D GGAQL VP G WLTGSFNLTS+F
Sbjct: 62 RAHTASITEFGGVGDGVTSNTKAFQAAVEQLSQYTDDGGAQLYVPAGKWLTGSFNLTSHF 121
Query: 138 TLFLERGAVMLGSQ 151
TLFL + AV+L SQ
Sbjct: 122 TLFLHQDAVLLASQ 135
>gi|225426168|ref|XP_002278930.1| PREDICTED: probable polygalacturonase [Vitis vinifera]
Length = 480
Score = 97.1 bits (240), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 45/74 (60%), Positives = 57/74 (77%)
Query: 78 RKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNF 137
R + S+ DFGGVGDGTTSNT+AF+ A+ ++ F GG+QL VP G WLTGSFNLTS+F
Sbjct: 49 RAHSASLTDFGGVGDGTTSNTKAFQAAIDHLSQFASDGGSQLFVPPGRWLTGSFNLTSHF 108
Query: 138 TLFLERGAVMLGSQ 151
TL+L + AV+L SQ
Sbjct: 109 TLYLHKDAVLLASQ 122
>gi|297830296|ref|XP_002883030.1| hypothetical protein ARALYDRAFT_318449 [Arabidopsis lyrata subsp.
lyrata]
gi|297328870|gb|EFH59289.1| hypothetical protein ARALYDRAFT_318449 [Arabidopsis lyrata subsp.
lyrata]
Length = 452
Score = 96.7 bits (239), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 47/76 (61%), Positives = 57/76 (75%)
Query: 75 LPERKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLT 134
L R ++SI +FG VGDG T NT AF+ A+ Y++ F DKGGAQL VP G WLTGSFNLT
Sbjct: 31 LDPRPHSVSILEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPPGKWLTGSFNLT 90
Query: 135 SNFTLFLERGAVMLGS 150
S+ TLFLE+GA +L S
Sbjct: 91 SHLTLFLEKGATILAS 106
>gi|302758838|ref|XP_002962842.1| hypothetical protein SELMODRAFT_78556 [Selaginella moellendorffii]
gi|300169703|gb|EFJ36305.1| hypothetical protein SELMODRAFT_78556 [Selaginella moellendorffii]
Length = 439
Score = 96.3 bits (238), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 49/76 (64%), Positives = 57/76 (75%), Gaps = 2/76 (2%)
Query: 78 RKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFG--DKGGAQLNVPEGLWLTGSFNLTS 135
R + SI DFG +GDG T NT AF+ A+ Y+ DKGGA L VPEG WLTGSFNLTS
Sbjct: 25 RPHSASIVDFGAIGDGVTLNTLAFQNAMFYLSSITATDKGGAMLYVPEGRWLTGSFNLTS 84
Query: 136 NFTLFLERGAVMLGSQ 151
+FTL+LERGAV+LGSQ
Sbjct: 85 HFTLYLERGAVILGSQ 100
>gi|357479389|ref|XP_003609980.1| Polygalacturonase-like protein [Medicago truncatula]
gi|355511035|gb|AES92177.1| Polygalacturonase-like protein [Medicago truncatula]
Length = 563
Score = 96.3 bits (238), Expect = 4e-18, Method: Composition-based stats.
Identities = 45/72 (62%), Positives = 52/72 (72%)
Query: 78 RKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNF 137
R V ++ DFGGVGDG T NTEAF +AV + FG KGGAQLNVP G WLT FNLTS+
Sbjct: 70 RPVVFNLTDFGGVGDGVTLNTEAFERAVSAISKFGKKGGAQLNVPPGRWLTAPFNLTSHI 129
Query: 138 TLFLERGAVMLG 149
TLFL + AV+L
Sbjct: 130 TLFLAQDAVILA 141
>gi|302815490|ref|XP_002989426.1| hypothetical protein SELMODRAFT_129742 [Selaginella moellendorffii]
gi|300142820|gb|EFJ09517.1| hypothetical protein SELMODRAFT_129742 [Selaginella moellendorffii]
Length = 439
Score = 96.3 bits (238), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 49/76 (64%), Positives = 57/76 (75%), Gaps = 2/76 (2%)
Query: 78 RKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFG--DKGGAQLNVPEGLWLTGSFNLTS 135
R + SI DFG +GDG T NT AF+ A+ Y+ DKGGA L VPEG WLTGSFNLTS
Sbjct: 25 RPHSASIVDFGAIGDGVTLNTLAFQNAMFYLSSITATDKGGAMLYVPEGRWLTGSFNLTS 84
Query: 136 NFTLFLERGAVMLGSQ 151
+FTL+LERGAV+LGSQ
Sbjct: 85 HFTLYLERGAVILGSQ 100
>gi|255537567|ref|XP_002509850.1| polygalacturonase, putative [Ricinus communis]
gi|223549749|gb|EEF51237.1| polygalacturonase, putative [Ricinus communis]
Length = 480
Score = 95.9 bits (237), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 45/74 (60%), Positives = 57/74 (77%)
Query: 78 RKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNF 137
R S++DFGGVGDG TSNT+AF+ A+ ++ F GG+QL VP G WLTGSFNLTS+F
Sbjct: 49 RAHEASLEDFGGVGDGQTSNTKAFQAAIDHLSQFSYDGGSQLYVPPGKWLTGSFNLTSHF 108
Query: 138 TLFLERGAVMLGSQ 151
TLFL++ AV+L SQ
Sbjct: 109 TLFLDKDAVLLASQ 122
>gi|357150536|ref|XP_003575492.1| PREDICTED: probable polygalacturonase-like [Brachypodium
distachyon]
Length = 451
Score = 95.9 bits (237), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 43/74 (58%), Positives = 58/74 (78%)
Query: 78 RKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNF 137
R +++I +FG VGDG T NT F+ A+ Y++ F DKGGAQL VP+G WLTGSFNLTS+
Sbjct: 33 RPHSVTITEFGAVGDGVTVNTVPFQNAIFYLRSFADKGGAQLYVPKGRWLTGSFNLTSHL 92
Query: 138 TLFLERGAVMLGSQ 151
TLFLE+ AV++G++
Sbjct: 93 TLFLEKDAVIVGTK 106
>gi|255541678|ref|XP_002511903.1| polygalacturonase, putative [Ricinus communis]
gi|223549083|gb|EEF50572.1| polygalacturonase, putative [Ricinus communis]
Length = 472
Score = 95.5 bits (236), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 45/74 (60%), Positives = 57/74 (77%)
Query: 78 RKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNF 137
R + SI DFGGVGDG TSNT+AF+ A+ ++ + GG+QL VP G WLTGSF+LTS+F
Sbjct: 50 RAHSASITDFGGVGDGITSNTKAFQDAIAHLSQYATDGGSQLFVPAGKWLTGSFSLTSHF 109
Query: 138 TLFLERGAVMLGSQ 151
TLFL + AV+LGSQ
Sbjct: 110 TLFLHKDAVLLGSQ 123
>gi|307135908|gb|ADN33771.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Cucumis melo subsp. melo]
Length = 188
Score = 95.5 bits (236), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 45/87 (51%), Positives = 57/87 (65%)
Query: 65 CAAGLLGDQYLPERKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEG 124
C L + R+ + DFGGVGDG TSNT+AFR+A+ ++ GGAQL VP G
Sbjct: 37 CPTNYLQVPAINCRQHTAVLTDFGGVGDGVTSNTQAFRRAIEHLSPLAANGGAQLIVPPG 96
Query: 125 LWLTGSFNLTSNFTLFLERGAVMLGSQ 151
WLTGSFNLTS+FTLF+ + A +L SQ
Sbjct: 97 KWLTGSFNLTSHFTLFVHKDATILASQ 123
>gi|326517826|dbj|BAK03831.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326520253|dbj|BAK07385.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 495
Score = 95.5 bits (236), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 45/72 (62%), Positives = 53/72 (73%)
Query: 78 RKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNF 137
R +A ++ DFGGVGDG T NT AF +AV + F D+GGAQLNVP G WLTG FNLTS+
Sbjct: 73 RPMAYNLTDFGGVGDGRTVNTRAFERAVETITAFADRGGAQLNVPPGRWLTGPFNLTSHM 132
Query: 138 TLFLERGAVMLG 149
TLFL GA +LG
Sbjct: 133 TLFLAEGAEILG 144
>gi|326489917|dbj|BAJ94032.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 158
Score = 95.1 bits (235), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 45/72 (62%), Positives = 53/72 (73%)
Query: 78 RKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNF 137
R +A ++ DFGGVGDG T NT AF +AV + F D+GGAQLNVP G WLTG FNLTS+
Sbjct: 73 RPMAYNLTDFGGVGDGRTVNTRAFERAVETITAFADRGGAQLNVPPGRWLTGPFNLTSHM 132
Query: 138 TLFLERGAVMLG 149
TLFL GA +LG
Sbjct: 133 TLFLAEGAEILG 144
>gi|297816104|ref|XP_002875935.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297321773|gb|EFH52194.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 469
Score = 95.1 bits (235), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 45/74 (60%), Positives = 54/74 (72%)
Query: 78 RKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNF 137
RK + + DFG VGDG TSNT AF+KA+ + GGAQL VP G WLTGSFNLTS+F
Sbjct: 41 RKHSAILTDFGAVGDGKTSNTNAFKKAISKLSQMATDGGAQLVVPPGKWLTGSFNLTSHF 100
Query: 138 TLFLERGAVMLGSQ 151
TLF++RGA +L SQ
Sbjct: 101 TLFIQRGATILASQ 114
>gi|223949035|gb|ACN28601.1| unknown [Zea mays]
Length = 376
Score = 95.1 bits (235), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 44/74 (59%), Positives = 57/74 (77%)
Query: 78 RKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNF 137
R +++I +FG VGDG T NT F+ AV Y++ F DKGGAQL VP G WLTGSFNLTS+
Sbjct: 40 RPHSVTITEFGAVGDGRTLNTVPFQNAVFYVRSFADKGGAQLYVPRGRWLTGSFNLTSHL 99
Query: 138 TLFLERGAVMLGSQ 151
TL+LE GAV++G++
Sbjct: 100 TLYLEEGAVIVGAK 113
>gi|212274809|ref|NP_001130359.1| uncharacterized protein LOC100191454 precursor [Zea mays]
gi|194688932|gb|ACF78550.1| unknown [Zea mays]
gi|413920257|gb|AFW60189.1| hypothetical protein ZEAMMB73_155387 [Zea mays]
Length = 458
Score = 95.1 bits (235), Expect = 9e-18, Method: Composition-based stats.
Identities = 44/74 (59%), Positives = 57/74 (77%)
Query: 78 RKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNF 137
R +++I +FG VGDG T NT F+ AV Y++ F DKGGAQL VP G WLTGSFNLTS+
Sbjct: 40 RPHSVTITEFGAVGDGRTLNTVPFQNAVFYVRSFADKGGAQLYVPRGRWLTGSFNLTSHL 99
Query: 138 TLFLERGAVMLGSQ 151
TL+LE GAV++G++
Sbjct: 100 TLYLEEGAVIVGAK 113
>gi|242061204|ref|XP_002451891.1| hypothetical protein SORBIDRAFT_04g009310 [Sorghum bicolor]
gi|241931722|gb|EES04867.1| hypothetical protein SORBIDRAFT_04g009310 [Sorghum bicolor]
Length = 448
Score = 95.1 bits (235), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 52/88 (59%), Positives = 62/88 (70%), Gaps = 4/88 (4%)
Query: 64 SCAAGLLGDQYLPERKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPE 123
SCA G+ ++ PE A+SI DFGGVGDG T NT AFRKAV +Q +GG L+VP
Sbjct: 31 SCA-GVAPAKHRPE---AISITDFGGVGDGRTLNTWAFRKAVYRIQHQRRRGGTTLHVPA 86
Query: 124 GLWLTGSFNLTSNFTLFLERGAVMLGSQ 151
G WLTGSFNLTS+ TLFL RGAV+ +Q
Sbjct: 87 GTWLTGSFNLTSHMTLFLARGAVLKATQ 114
>gi|15229058|ref|NP_190464.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
gi|6522571|emb|CAB62015.1| endo-polygalacturonase-like protein [Arabidopsis thaliana]
gi|67633678|gb|AAY78763.1| glycoside hydrolase family 28 protein [Arabidopsis thaliana]
gi|332644955|gb|AEE78476.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
Length = 469
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 45/74 (60%), Positives = 54/74 (72%)
Query: 78 RKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNF 137
RK + + DFG VGDG TSNT+AFR A+ + GGAQL VP G WLTGSFNLTS+F
Sbjct: 41 RKHSAILTDFGAVGDGKTSNTKAFRNAISKLSQMATDGGAQLVVPPGKWLTGSFNLTSHF 100
Query: 138 TLFLERGAVMLGSQ 151
TLF++RGA +L SQ
Sbjct: 101 TLFIQRGATILASQ 114
>gi|194696678|gb|ACF82423.1| unknown [Zea mays]
Length = 335
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 44/74 (59%), Positives = 57/74 (77%)
Query: 78 RKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNF 137
R +++I +FG VGDG T NT F+ AV Y++ F DKGGAQL VP G WLTGSFNLTS+
Sbjct: 40 RPHSVTITEFGAVGDGRTLNTVPFQNAVFYVRSFADKGGAQLYVPRGRWLTGSFNLTSHL 99
Query: 138 TLFLERGAVMLGSQ 151
TL+LE GAV++G++
Sbjct: 100 TLYLEEGAVIVGAK 113
>gi|115489012|ref|NP_001066993.1| Os12g0554800 [Oryza sativa Japonica Group]
gi|113649500|dbj|BAF30012.1| Os12g0554800, partial [Oryza sativa Japonica Group]
Length = 424
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 42/74 (56%), Positives = 57/74 (77%)
Query: 78 RKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNF 137
R +++I +FG VGDG T NT F+ A+ Y++ F DKGGAQL VP G WLTGSFNLTS+
Sbjct: 6 RPHSVTISEFGAVGDGVTVNTLPFQNAIFYLRSFADKGGAQLYVPRGRWLTGSFNLTSHL 65
Query: 138 TLFLERGAVMLGSQ 151
T+FLE+ AV++G++
Sbjct: 66 TIFLEKDAVIIGAK 79
>gi|357450133|ref|XP_003595343.1| Polygalacturonase [Medicago truncatula]
gi|355484391|gb|AES65594.1| Polygalacturonase [Medicago truncatula]
gi|388518965|gb|AFK47544.1| unknown [Medicago truncatula]
Length = 474
Score = 94.7 bits (234), Expect = 1e-17, Method: Composition-based stats.
Identities = 44/74 (59%), Positives = 52/74 (70%)
Query: 78 RKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNF 137
R V ++ DFGGVGDG T NT+AF +AV + F ++GGAQLNVP G WLT FNLTS
Sbjct: 52 RPVVFNLTDFGGVGDGVTLNTKAFERAVSVISKFRNQGGAQLNVPPGFWLTSPFNLTSRM 111
Query: 138 TLFLERGAVMLGSQ 151
TLFL R AV+L Q
Sbjct: 112 TLFLARDAVILAVQ 125
>gi|224064057|ref|XP_002301370.1| predicted protein [Populus trichocarpa]
gi|222843096|gb|EEE80643.1| predicted protein [Populus trichocarpa]
Length = 470
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 44/74 (59%), Positives = 57/74 (77%)
Query: 78 RKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNF 137
R + S+ DFGGVGDGTTSNT+AF+ A+ ++ F GG+QL VP G WLTGSF+LTS+F
Sbjct: 39 RAHSASLTDFGGVGDGTTSNTKAFKDAIDHLSQFSSDGGSQLFVPAGKWLTGSFSLTSHF 98
Query: 138 TLFLERGAVMLGSQ 151
TL+L + AV+L SQ
Sbjct: 99 TLYLHKDAVLLASQ 112
>gi|356565756|ref|XP_003551103.1| PREDICTED: probable polygalacturonase-like isoform 2 [Glycine max]
Length = 491
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 46/72 (63%), Positives = 53/72 (73%)
Query: 78 RKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNF 137
R +A ++ DFGGVGDG T NTEAF +AV + FG KGGAQLNVP G WLT FNLTS+
Sbjct: 70 RPMAFNLTDFGGVGDGVTLNTEAFERAVSAVSKFGKKGGAQLNVPPGRWLTAPFNLTSHM 129
Query: 138 TLFLERGAVMLG 149
TLFL AV+LG
Sbjct: 130 TLFLAEDAVILG 141
>gi|91806548|gb|ABE66001.1| glycoside hydrolase family 28 protein/polygalacturonase family
protein [Arabidopsis thaliana]
Length = 416
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 45/74 (60%), Positives = 54/74 (72%)
Query: 78 RKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNF 137
RK + + DFG VGDG TSNT+AFR A+ + GGAQL VP G WLTGSFNLTS+F
Sbjct: 41 RKHSAILTDFGAVGDGKTSNTKAFRNAISKLSQMATDGGAQLVVPPGKWLTGSFNLTSHF 100
Query: 138 TLFLERGAVMLGSQ 151
TLF++RGA +L SQ
Sbjct: 101 TLFIQRGATILASQ 114
>gi|297745346|emb|CBI40426.3| unnamed protein product [Vitis vinifera]
Length = 379
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 46/74 (62%), Positives = 56/74 (75%)
Query: 78 RKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNF 137
R + S+ DFGGVGDG T NT+AF+ AV + +G +GGAQL VP G WLTGSF+LTS+F
Sbjct: 45 RAHSASLVDFGGVGDGQTLNTKAFQDAVSELSKYGSEGGAQLYVPAGKWLTGSFSLTSHF 104
Query: 138 TLFLERGAVMLGSQ 151
TLFL R AV+L SQ
Sbjct: 105 TLFLHRDAVLLASQ 118
>gi|224071986|ref|XP_002303605.1| predicted protein [Populus trichocarpa]
gi|222841037|gb|EEE78584.1| predicted protein [Populus trichocarpa]
Length = 470
Score = 94.4 bits (233), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 44/74 (59%), Positives = 56/74 (75%)
Query: 78 RKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNF 137
R + S+ DFGGVGDGTT NTEAF+ A+ ++ F +GG+ L VP G WLTGSFNLTS F
Sbjct: 40 RAHSASVSDFGGVGDGTTVNTEAFQAAIDHLSQFSSEGGSLLYVPPGRWLTGSFNLTSYF 99
Query: 138 TLFLERGAVMLGSQ 151
TL+L++ AV+L SQ
Sbjct: 100 TLYLDKDAVLLASQ 113
>gi|356534105|ref|XP_003535598.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 475
Score = 94.4 bits (233), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 45/74 (60%), Positives = 55/74 (74%)
Query: 78 RKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNF 137
RK + + DFGGVGDG TSNT+AF+ A+R + + GGAQL VP G WLTG FNLTS+F
Sbjct: 48 RKHSAVLTDFGGVGDGKTSNTKAFQSAIRKLGQYASDGGAQLIVPPGKWLTGPFNLTSHF 107
Query: 138 TLFLERGAVMLGSQ 151
TLFL + AV+L SQ
Sbjct: 108 TLFLHKDAVILASQ 121
>gi|356520375|ref|XP_003528838.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 482
Score = 94.4 bits (233), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/127 (44%), Positives = 76/127 (59%), Gaps = 18/127 (14%)
Query: 25 IVLIVTLITIFSLEITKKSVLSPKRVGFSGADGAIFDPDSCAAGLLGDQYLPERKVAMSI 84
+V V L+T+ S E+ + + K VG S AI +C R + S+
Sbjct: 16 LVCAVLLVTLLSSEVAESRKV--KTVGTSFKYEAI----NC------------RTHSASL 57
Query: 85 KDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFLERG 144
DFGGVGDG TSNT+AF+ A+ ++ + KGGAQL VP G WLTGSF+L S+FTL+L +
Sbjct: 58 TDFGGVGDGKTSNTKAFQSAISHLSQYASKGGAQLYVPAGKWLTGSFSLISHFTLYLNKD 117
Query: 145 AVMLGSQ 151
AV+L SQ
Sbjct: 118 AVLLASQ 124
>gi|255641025|gb|ACU20792.1| unknown [Glycine max]
Length = 243
Score = 94.4 bits (233), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/127 (44%), Positives = 76/127 (59%), Gaps = 18/127 (14%)
Query: 25 IVLIVTLITIFSLEITKKSVLSPKRVGFSGADGAIFDPDSCAAGLLGDQYLPERKVAMSI 84
+V V L+T+ S E+ + + K VG S AI +C R + S+
Sbjct: 16 LVCAVLLVTLLSSEVAESRKV--KTVGTSFKYEAI----NC------------RTHSASL 57
Query: 85 KDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFLERG 144
DFGGVGDG TSNT+AF+ A+ ++ + KGGAQL VP G WLTGSF+L S+FTL+L +
Sbjct: 58 TDFGGVGDGKTSNTKAFQSAISHLSQYASKGGAQLYVPAGKWLTGSFSLISHFTLYLNKD 117
Query: 145 AVMLGSQ 151
AV+L SQ
Sbjct: 118 AVLLASQ 124
>gi|108862809|gb|ABA99544.2| glycoside hydrolase family 28 protein, putative, expressed [Oryza
sativa Japonica Group]
gi|222617271|gb|EEE53403.1| hypothetical protein OsJ_36464 [Oryza sativa Japonica Group]
Length = 457
Score = 94.4 bits (233), Expect = 1e-17, Method: Composition-based stats.
Identities = 41/71 (57%), Positives = 56/71 (78%)
Query: 81 AMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLF 140
+++I +FG VGDG T NT F+ A+ Y++ F DKGGAQL VP G WLTGSFNLTS+ T+F
Sbjct: 42 SVTISEFGAVGDGVTVNTLPFQNAIFYLRSFADKGGAQLYVPRGRWLTGSFNLTSHLTIF 101
Query: 141 LERGAVMLGSQ 151
LE+ AV++G++
Sbjct: 102 LEKDAVIIGAK 112
>gi|223635599|sp|A7PZL3.1|PGLR_VITVI RecName: Full=Probable polygalacturonase; Short=PG; AltName:
Full=Pectinase
Length = 491
Score = 94.4 bits (233), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 46/74 (62%), Positives = 56/74 (75%)
Query: 78 RKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNF 137
R + S+ DFGGVGDG T NT+AF+ AV + +G +GGAQL VP G WLTGSF+LTS+F
Sbjct: 59 RAHSASLVDFGGVGDGQTLNTKAFQDAVSELSKYGSEGGAQLYVPAGKWLTGSFSLTSHF 118
Query: 138 TLFLERGAVMLGSQ 151
TLFL R AV+L SQ
Sbjct: 119 TLFLHRDAVLLASQ 132
>gi|359489656|ref|XP_003633958.1| PREDICTED: probable polygalacturonase-like [Vitis vinifera]
Length = 479
Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 46/74 (62%), Positives = 56/74 (75%)
Query: 78 RKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNF 137
R + S+ DFGGVGDG T NT+AF+ AV + +G +GGAQL VP G WLTGSF+LTS+F
Sbjct: 47 RAHSASLVDFGGVGDGQTLNTKAFQDAVSELSKYGSEGGAQLYVPAGKWLTGSFSLTSHF 106
Query: 138 TLFLERGAVMLGSQ 151
TLFL R AV+L SQ
Sbjct: 107 TLFLHRDAVLLASQ 120
>gi|356513351|ref|XP_003525377.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 469
Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 43/74 (58%), Positives = 57/74 (77%)
Query: 78 RKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNF 137
R + S+++FGGVGDGTT NT+AF+ A+ ++ + GG+QL VP G WLTGSFNLTS+F
Sbjct: 39 RAYSASLEEFGGVGDGTTLNTKAFQAAIDHLSQYASSGGSQLYVPPGKWLTGSFNLTSHF 98
Query: 138 TLFLERGAVMLGSQ 151
TLFL + AV+L SQ
Sbjct: 99 TLFLHKDAVILASQ 112
>gi|224134791|ref|XP_002327490.1| predicted protein [Populus trichocarpa]
gi|222836044|gb|EEE74465.1| predicted protein [Populus trichocarpa]
Length = 452
Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 45/79 (56%), Positives = 57/79 (72%)
Query: 73 QYLPERKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFN 132
Q + RK + + DFGGVGDG TSNT+AF+ A+ + + GGAQL VP G WLTGSFN
Sbjct: 23 QAINCRKHSAVLTDFGGVGDGKTSNTKAFKAAIAELSQYASDGGAQLIVPPGKWLTGSFN 82
Query: 133 LTSNFTLFLERGAVMLGSQ 151
L+S+FTLFL + AV+L SQ
Sbjct: 83 LSSHFTLFLHKDAVLLASQ 101
>gi|255545182|ref|XP_002513652.1| Exopolygalacturonase precursor, putative [Ricinus communis]
gi|223547560|gb|EEF49055.1| Exopolygalacturonase precursor, putative [Ricinus communis]
Length = 452
Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 50/93 (53%), Positives = 62/93 (66%), Gaps = 2/93 (2%)
Query: 59 IFDPDSCAAGLLGDQYLPERKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQ 118
IF+ DS A + + RK + DFGGVGDG T NT+AF+ A+ + + D GGA+
Sbjct: 37 IFNKDSYNA--VNYAAINCRKHTAFLTDFGGVGDGKTLNTKAFQAAIANLSQYADDGGAE 94
Query: 119 LNVPEGLWLTGSFNLTSNFTLFLERGAVMLGSQ 151
L VP G WLTGSFNLTS+FTLFL RGA +L SQ
Sbjct: 95 LIVPAGKWLTGSFNLTSHFTLFLHRGATILASQ 127
>gi|388520257|gb|AFK48190.1| unknown [Lotus japonicus]
Length = 482
Score = 93.6 bits (231), Expect = 2e-17, Method: Composition-based stats.
Identities = 45/74 (60%), Positives = 53/74 (71%)
Query: 78 RKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNF 137
R VA ++ DFGGVGDG T NT AF +AV + +KGG QLNVP GLWLT FNLTS+
Sbjct: 60 RPVAFNLTDFGGVGDGVTLNTVAFERAVSAISKLREKGGGQLNVPPGLWLTAPFNLTSHM 119
Query: 138 TLFLERGAVMLGSQ 151
TLFL + AV+LG Q
Sbjct: 120 TLFLAQDAVILGIQ 133
>gi|297803786|ref|XP_002869777.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
gi|297315613|gb|EFH46036.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
Length = 494
Score = 93.6 bits (231), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 46/74 (62%), Positives = 53/74 (71%)
Query: 78 RKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNF 137
R + S+ +FG VGDG TSNT AFR AV + F D GG+ L VP G WLTGSFNLTS+F
Sbjct: 63 RAYSASLDEFGAVGDGVTSNTAAFRDAVSQLSRFADYGGSLLFVPAGRWLTGSFNLTSHF 122
Query: 138 TLFLERGAVMLGSQ 151
TLFL R AV+L SQ
Sbjct: 123 TLFLHRDAVILASQ 136
>gi|224077474|ref|XP_002305262.1| predicted protein [Populus trichocarpa]
gi|222848226|gb|EEE85773.1| predicted protein [Populus trichocarpa]
Length = 437
Score = 93.6 bits (231), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 44/74 (59%), Positives = 55/74 (74%)
Query: 78 RKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNF 137
RK + + DFG VGDG TSNT+AF +A++ + + GGAQL VP G WLTGSFNLTS+F
Sbjct: 10 RKHSAVLTDFGAVGDGKTSNTKAFAEAIKKLSKYAPDGGAQLIVPAGKWLTGSFNLTSHF 69
Query: 138 TLFLERGAVMLGSQ 151
TLFL + AV+L SQ
Sbjct: 70 TLFLHKDAVLLASQ 83
>gi|218187051|gb|EEC69478.1| hypothetical protein OsI_38684 [Oryza sativa Indica Group]
Length = 365
Score = 93.6 bits (231), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 41/71 (57%), Positives = 56/71 (78%)
Query: 81 AMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLF 140
+++I +FG VGDG T NT F+ A+ Y++ F DKGGAQL VP G WLTGSFNLTS+ T+F
Sbjct: 32 SVTISEFGAVGDGVTVNTLPFQNAIFYLRSFADKGGAQLYVPRGRWLTGSFNLTSHLTIF 91
Query: 141 LERGAVMLGSQ 151
LE+ AV++G++
Sbjct: 92 LEKDAVIIGAK 102
>gi|359490611|ref|XP_002273143.2| PREDICTED: probable polygalacturonase-like, partial [Vitis
vinifera]
Length = 432
Score = 93.6 bits (231), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 42/74 (56%), Positives = 58/74 (78%)
Query: 78 RKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNF 137
RK + + +FGG+GDG TSNT+AF+ A+ +++ F GGA+L VP G WLTGSFNLTS+F
Sbjct: 2 RKHSALLTEFGGIGDGKTSNTKAFKTAIDHLKQFATDGGAELIVPPGKWLTGSFNLTSHF 61
Query: 138 TLFLERGAVMLGSQ 151
TL++ + AV+LGSQ
Sbjct: 62 TLYIHKDAVILGSQ 75
>gi|357151266|ref|XP_003575734.1| PREDICTED: probable polygalacturonase-like [Brachypodium
distachyon]
Length = 457
Score = 93.2 bits (230), Expect = 3e-17, Method: Composition-based stats.
Identities = 44/74 (59%), Positives = 57/74 (77%)
Query: 78 RKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNF 137
R +++I +FG VG+G T NT F+ AV Y + F DKGGAQL VP+G WLTGSFNLTS+
Sbjct: 39 RPHSVTITEFGAVGNGRTLNTLPFQNAVFYARSFADKGGAQLYVPKGRWLTGSFNLTSHL 98
Query: 138 TLFLERGAVMLGSQ 151
TLFLE GAV++G++
Sbjct: 99 TLFLEEGAVIIGAK 112
>gi|224058441|ref|XP_002299511.1| predicted protein [Populus trichocarpa]
gi|222846769|gb|EEE84316.1| predicted protein [Populus trichocarpa]
Length = 481
Score = 93.2 bits (230), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 44/77 (57%), Positives = 58/77 (75%)
Query: 75 LPERKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLT 134
L R + S+ DFGGVGDGTT+NT+AF+ A+ ++ F +GG+ L VP G WLTGSFNLT
Sbjct: 46 LSCRAHSASVSDFGGVGDGTTANTKAFQAAIDHLSQFSSEGGSILYVPPGRWLTGSFNLT 105
Query: 135 SNFTLFLERGAVMLGSQ 151
S FTL+L++ AV+L SQ
Sbjct: 106 SYFTLYLDKDAVLLASQ 122
>gi|115486511|ref|NP_001068399.1| Os11g0658800 [Oryza sativa Japonica Group]
gi|77552386|gb|ABA95183.1| glycoside hydrolase family 28 protein, putative, expressed [Oryza
sativa Japonica Group]
gi|113645621|dbj|BAF28762.1| Os11g0658800 [Oryza sativa Japonica Group]
gi|222616379|gb|EEE52511.1| hypothetical protein OsJ_34717 [Oryza sativa Japonica Group]
Length = 449
Score = 93.2 bits (230), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 44/74 (59%), Positives = 56/74 (75%)
Query: 78 RKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNF 137
R +++I +FG VGDG T NT F+ AV Y + F DKGGAQL VP+G WLTGSFNLTS+
Sbjct: 31 RPHSVTITEFGAVGDGKTLNTLPFQNAVFYARSFADKGGAQLYVPKGRWLTGSFNLTSHL 90
Query: 138 TLFLERGAVMLGSQ 151
TLFLE AV++G++
Sbjct: 91 TLFLEEEAVIIGTK 104
>gi|218186147|gb|EEC68574.1| hypothetical protein OsI_36908 [Oryza sativa Indica Group]
Length = 449
Score = 93.2 bits (230), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 44/74 (59%), Positives = 56/74 (75%)
Query: 78 RKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNF 137
R +++I +FG VGDG T NT F+ AV Y + F DKGGAQL VP+G WLTGSFNLTS+
Sbjct: 31 RPHSVTITEFGAVGDGKTLNTLPFQNAVFYARSFADKGGAQLYVPKGRWLTGSFNLTSHL 90
Query: 138 TLFLERGAVMLGSQ 151
TLFLE AV++G++
Sbjct: 91 TLFLEEEAVIIGTK 104
>gi|242094380|ref|XP_002437680.1| hypothetical protein SORBIDRAFT_10g000660 [Sorghum bicolor]
gi|241915903|gb|EER89047.1| hypothetical protein SORBIDRAFT_10g000660 [Sorghum bicolor]
Length = 495
Score = 92.8 bits (229), Expect = 4e-17, Method: Composition-based stats.
Identities = 47/76 (61%), Positives = 53/76 (69%), Gaps = 2/76 (2%)
Query: 78 RKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFG--DKGGAQLNVPEGLWLTGSFNLTS 135
R S+ DFGGVGDGTTSNT AFR AV ++ + D GGA L VP G WLTG FNLTS
Sbjct: 57 RAHTASLADFGGVGDGTTSNTAAFRSAVDHLSQYSGEDAGGAMLYVPAGKWLTGPFNLTS 116
Query: 136 NFTLFLERGAVMLGSQ 151
+FTLFL AV+L SQ
Sbjct: 117 HFTLFLHSDAVILASQ 132
>gi|356568425|ref|XP_003552411.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 484
Score = 92.8 bits (229), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 41/74 (55%), Positives = 58/74 (78%)
Query: 78 RKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNF 137
R + ++ DFGGVGDG TSNT+AF+ A+ ++ + +GG+QL VP G WLTGSF+LTS+F
Sbjct: 51 RAHSAALTDFGGVGDGKTSNTKAFQSAISHLSQYASEGGSQLYVPAGKWLTGSFSLTSHF 110
Query: 138 TLFLERGAVMLGSQ 151
TL+L++ AV+L SQ
Sbjct: 111 TLYLDKDAVLLASQ 124
>gi|411101510|gb|AFW04075.1| polygalacturonase [Litchi chinensis]
Length = 481
Score = 92.8 bits (229), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 44/74 (59%), Positives = 54/74 (72%)
Query: 78 RKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNF 137
RK + + DFGGVGDG TSNT+AFR A+ + GGA L VP G WLTGSFNLTS+F
Sbjct: 52 RKHSAVLTDFGGVGDGKTSNTKAFRSAIDKLSKLASDGGAALVVPPGKWLTGSFNLTSHF 111
Query: 138 TLFLERGAVMLGSQ 151
TL++ + AV+LGSQ
Sbjct: 112 TLYIHKDAVLLGSQ 125
>gi|357443839|ref|XP_003592197.1| Endo-polygalacturonase-like protein [Medicago truncatula]
gi|355481245|gb|AES62448.1| Endo-polygalacturonase-like protein [Medicago truncatula]
Length = 475
Score = 92.8 bits (229), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 44/74 (59%), Positives = 54/74 (72%)
Query: 78 RKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNF 137
RK + DFG VGDG T NT+AF A+ + + + GGAQL VP G WLTGSFNLTS+F
Sbjct: 51 RKHNAVLTDFGAVGDGKTLNTKAFNSAITNLSQYANDGGAQLIVPPGKWLTGSFNLTSHF 110
Query: 138 TLFLERGAVMLGSQ 151
TLFL++GAV+L SQ
Sbjct: 111 TLFLQKGAVILASQ 124
>gi|356535839|ref|XP_003536450.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 476
Score = 92.8 bits (229), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 45/74 (60%), Positives = 54/74 (72%)
Query: 78 RKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNF 137
RK + + DFGGVGDG TSNT+AF+ A+ + GGAQL VP G WLTGSFNLTS+F
Sbjct: 49 RKHSAVLTDFGGVGDGKTSNTKAFQSAISKLSRVASDGGAQLIVPPGKWLTGSFNLTSHF 108
Query: 138 TLFLERGAVMLGSQ 151
TLFL + AV+L SQ
Sbjct: 109 TLFLHKDAVILASQ 122
>gi|302143795|emb|CBI22656.3| unnamed protein product [Vitis vinifera]
Length = 621
Score = 92.4 bits (228), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 42/74 (56%), Positives = 58/74 (78%)
Query: 78 RKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNF 137
RK + + +FGG+GDG TSNT+AF+ A+ +++ F GGA+L VP G WLTGSFNLTS+F
Sbjct: 45 RKHSALLTEFGGIGDGKTSNTKAFKTAIDHLKQFATDGGAELIVPPGKWLTGSFNLTSHF 104
Query: 138 TLFLERGAVMLGSQ 151
TL++ + AV+LGSQ
Sbjct: 105 TLYIHKDAVILGSQ 118
Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/74 (55%), Positives = 52/74 (70%)
Query: 78 RKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNF 137
RK + + DFG GDG T NT+AF+ A+ + GGAQL VP G WLTGSFNLTS+F
Sbjct: 297 RKHSAVLTDFGAKGDGKTMNTKAFKSAIANLSQVAGDGGAQLIVPPGKWLTGSFNLTSHF 356
Query: 138 TLFLERGAVMLGSQ 151
TLF+ + AV+LG+Q
Sbjct: 357 TLFVHKDAVILGAQ 370
>gi|356528677|ref|XP_003532926.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 494
Score = 92.4 bits (228), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 43/74 (58%), Positives = 56/74 (75%)
Query: 78 RKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNF 137
R + S+++FGGVGDGTT NT+AF+ A+ + + GG+QL VP G WLTGSFNLTS+F
Sbjct: 64 RAYSASLEEFGGVGDGTTLNTKAFQAAIENLSQYAASGGSQLYVPPGKWLTGSFNLTSHF 123
Query: 138 TLFLERGAVMLGSQ 151
TLFL + AV+L SQ
Sbjct: 124 TLFLHKDAVILASQ 137
>gi|356565569|ref|XP_003551012.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 346
Score = 92.4 bits (228), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 44/74 (59%), Positives = 55/74 (74%)
Query: 78 RKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNF 137
RK + + DFGGVGDG TSNT+AF+ A+ + + GGA L VP G WLTGSFNLTS+F
Sbjct: 167 RKHSAVLTDFGGVGDGKTSNTKAFQYAISNLSHYASDGGALLVVPPGKWLTGSFNLTSHF 226
Query: 138 TLFLERGAVMLGSQ 151
TLFL++ A +LGSQ
Sbjct: 227 TLFLQKEATILGSQ 240
>gi|357443847|ref|XP_003592201.1| Polygalacturonase-like protein [Medicago truncatula]
gi|355481249|gb|AES62452.1| Polygalacturonase-like protein [Medicago truncatula]
Length = 478
Score = 92.4 bits (228), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 44/74 (59%), Positives = 55/74 (74%)
Query: 78 RKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNF 137
RK + + DFG VGDG T NT+AF A+ + + + GGAQL VP G WLTGSFNLTS+F
Sbjct: 51 RKHSAVLTDFGAVGDGKTLNTKAFNAAITNLSQYANDGGAQLIVPPGKWLTGSFNLTSHF 110
Query: 138 TLFLERGAVMLGSQ 151
TLFL++ AV+LGSQ
Sbjct: 111 TLFLQKDAVILGSQ 124
>gi|357443849|ref|XP_003592202.1| hypothetical protein MTR_1g100060 [Medicago truncatula]
gi|355481250|gb|AES62453.1| hypothetical protein MTR_1g100060 [Medicago truncatula]
Length = 487
Score = 92.4 bits (228), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 44/74 (59%), Positives = 55/74 (74%)
Query: 78 RKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNF 137
RK + + DFGGVGDG T NT+AF A+ + + + GGAQL VP G WLTGSFNLTS+F
Sbjct: 60 RKHSAVLTDFGGVGDGKTLNTKAFNSAITNLSQYANDGGAQLIVPPGKWLTGSFNLTSHF 119
Query: 138 TLFLERGAVMLGSQ 151
TLFL++ AV+L SQ
Sbjct: 120 TLFLQKDAVILASQ 133
>gi|357504351|ref|XP_003622464.1| Polygalacturonase-like protein [Medicago truncatula]
gi|355497479|gb|AES78682.1| Polygalacturonase-like protein [Medicago truncatula]
Length = 479
Score = 92.4 bits (228), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 42/74 (56%), Positives = 57/74 (77%)
Query: 78 RKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNF 137
R ++S+KDFGGVGDG TSNT+AF+ A+ ++ +GG+QL VP G WLTGSF+L S+F
Sbjct: 51 RAHSVSLKDFGGVGDGKTSNTKAFKSAISHLSQNASEGGSQLYVPAGKWLTGSFSLISHF 110
Query: 138 TLFLERGAVMLGSQ 151
TL+L + AV+L SQ
Sbjct: 111 TLYLHKDAVLLASQ 124
>gi|302809176|ref|XP_002986281.1| hypothetical protein SELMODRAFT_124011 [Selaginella moellendorffii]
gi|300145817|gb|EFJ12490.1| hypothetical protein SELMODRAFT_124011 [Selaginella moellendorffii]
Length = 445
Score = 92.4 bits (228), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 46/81 (56%), Positives = 57/81 (70%)
Query: 71 GDQYLPERKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGS 130
G++ R ++SI +FG VGDG T NT AF+ AV Y+Q F KGGAQL VP G WLTGS
Sbjct: 25 GNRRSVARPHSVSITEFGAVGDGQTVNTVAFQNAVFYLQSFAHKGGAQLYVPAGRWLTGS 84
Query: 131 FNLTSNFTLFLERGAVMLGSQ 151
F L S+ TLFL+ G+V+L SQ
Sbjct: 85 FTLISHLTLFLDTGSVILASQ 105
>gi|302814173|ref|XP_002988771.1| hypothetical protein SELMODRAFT_128450 [Selaginella moellendorffii]
gi|300143592|gb|EFJ10282.1| hypothetical protein SELMODRAFT_128450 [Selaginella moellendorffii]
Length = 445
Score = 92.4 bits (228), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 46/81 (56%), Positives = 57/81 (70%)
Query: 71 GDQYLPERKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGS 130
G++ R ++SI +FG VGDG T NT AF+ AV Y+Q F KGGAQL VP G WLTGS
Sbjct: 25 GNRRSVARPHSVSITEFGAVGDGQTVNTVAFQNAVFYLQSFAHKGGAQLYVPAGRWLTGS 84
Query: 131 FNLTSNFTLFLERGAVMLGSQ 151
F L S+ TLFL+ G+V+L SQ
Sbjct: 85 FTLISHLTLFLDTGSVILASQ 105
>gi|15236514|ref|NP_194081.1| putative polygalacturonase [Arabidopsis thaliana]
gi|3451075|emb|CAA20471.1| putative protein [Arabidopsis thaliana]
gi|7269198|emb|CAB79305.1| putative protein [Arabidopsis thaliana]
gi|23296346|gb|AAN13048.1| unknown protein [Arabidopsis thaliana]
gi|62320484|dbj|BAD95012.1| hypothetical protein [Arabidopsis thaliana]
gi|332659368|gb|AEE84768.1| putative polygalacturonase [Arabidopsis thaliana]
Length = 495
Score = 92.0 bits (227), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 45/74 (60%), Positives = 53/74 (71%)
Query: 78 RKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNF 137
R + S+ +FG VGDG TSNT AFR AV + F D GG+ L VP G WLTG+FNLTS+F
Sbjct: 64 RAYSASLDEFGAVGDGVTSNTAAFRDAVSQLSRFADYGGSLLFVPAGRWLTGNFNLTSHF 123
Query: 138 TLFLERGAVMLGSQ 151
TLFL R AV+L SQ
Sbjct: 124 TLFLHRDAVILASQ 137
>gi|356572848|ref|XP_003554577.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 467
Score = 92.0 bits (227), Expect = 7e-17, Method: Composition-based stats.
Identities = 42/73 (57%), Positives = 56/73 (76%)
Query: 78 RKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNF 137
R ++SI +FG VGDG T NT+AF+ A+ Y+ F DKGGA+L VP G WLTGSF+L S+
Sbjct: 39 RPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGRWLTGSFDLISHL 98
Query: 138 TLFLERGAVMLGS 150
TL+L++ AV+LGS
Sbjct: 99 TLWLDKDAVILGS 111
>gi|186701252|gb|ACC91278.1| glycoside hydrolase family 28 protein [Capsella rubella]
Length = 494
Score = 92.0 bits (227), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 45/74 (60%), Positives = 54/74 (72%)
Query: 78 RKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNF 137
R + S+ +FG VGDG TSNT+AFR AV + F D GG+ L VP G WLTG+FNLTS+F
Sbjct: 63 RAYSASLDEFGAVGDGVTSNTKAFRDAVSQLSRFEDYGGSLLFVPAGRWLTGNFNLTSHF 122
Query: 138 TLFLERGAVMLGSQ 151
TLFL R AV+L SQ
Sbjct: 123 TLFLHRDAVILASQ 136
>gi|225464581|ref|XP_002273669.1| PREDICTED: probable polygalacturonase-like [Vitis vinifera]
Length = 478
Score = 92.0 bits (227), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 41/74 (55%), Positives = 56/74 (75%)
Query: 78 RKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNF 137
RK + + DFG GDG T NT+AF+ A+ ++ F D GGA+L VP G WLTGSFNLTS+F
Sbjct: 49 RKHSAVLTDFGATGDGKTINTKAFKSAIDHLSQFADDGGAELIVPPGKWLTGSFNLTSHF 108
Query: 138 TLFLERGAVMLGSQ 151
TL++++ AV+LG+Q
Sbjct: 109 TLYIDKDAVILGAQ 122
>gi|359480238|ref|XP_002273855.2| PREDICTED: probable polygalacturonase-like [Vitis vinifera]
gi|297744085|emb|CBI37055.3| unnamed protein product [Vitis vinifera]
Length = 466
Score = 92.0 bits (227), Expect = 7e-17, Method: Composition-based stats.
Identities = 42/73 (57%), Positives = 56/73 (76%)
Query: 78 RKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNF 137
R +++I +FG VGDG T NT+AF+ A+ Y+ F DKGGAQL VP G WLTGSF+L S+
Sbjct: 39 RPHSVAITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAQLFVPAGRWLTGSFDLISHL 98
Query: 138 TLFLERGAVMLGS 150
TL+L++ AV+LGS
Sbjct: 99 TLWLDKDAVILGS 111
>gi|358248902|ref|NP_001240215.1| uncharacterized protein LOC100785005 precursor [Glycine max]
gi|255635243|gb|ACU17976.1| unknown [Glycine max]
Length = 477
Score = 91.7 bits (226), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 44/74 (59%), Positives = 55/74 (74%)
Query: 78 RKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNF 137
RK + + DFGGVGDG TSNT+AF+ A+ + + GGA L VP G WLTGSFNLTS+F
Sbjct: 49 RKHSAVLTDFGGVGDGKTSNTKAFQYAISNLSHYASDGGALLVVPPGKWLTGSFNLTSHF 108
Query: 138 TLFLERGAVMLGSQ 151
TLFL++ A +LGSQ
Sbjct: 109 TLFLQKEATILGSQ 122
>gi|356530824|ref|XP_003533980.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 476
Score = 91.7 bits (226), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 44/74 (59%), Positives = 55/74 (74%)
Query: 78 RKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNF 137
RK + + DFGGVGDG TSNT+AF+ A+ + + GGA L VP G WLTGSFNLTS+F
Sbjct: 49 RKHSAVLTDFGGVGDGKTSNTKAFQYAISNLSHYASDGGALLVVPPGKWLTGSFNLTSHF 108
Query: 138 TLFLERGAVMLGSQ 151
TLFL++ A +LGSQ
Sbjct: 109 TLFLQKEATILGSQ 122
>gi|356530050|ref|XP_003533597.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 484
Score = 91.7 bits (226), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 41/74 (55%), Positives = 57/74 (77%)
Query: 78 RKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNF 137
R + S+ DFGGVGDG SNT+AF+ A+ ++ + +GG+QL VP G WLTGSF+LTS+F
Sbjct: 51 RAHSASLTDFGGVGDGKASNTKAFQSAISHLSQYASEGGSQLYVPAGKWLTGSFSLTSHF 110
Query: 138 TLFLERGAVMLGSQ 151
TL+L++ AV+L SQ
Sbjct: 111 TLYLDKDAVLLASQ 124
>gi|357443845|ref|XP_003592200.1| Polygalacturonase-like protein [Medicago truncatula]
gi|355481248|gb|AES62451.1| Polygalacturonase-like protein [Medicago truncatula]
Length = 481
Score = 91.7 bits (226), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 43/74 (58%), Positives = 55/74 (74%)
Query: 78 RKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNF 137
RK + + DFGGVGDG T NT+AF A+ + + + GGAQL VP G WLTGSFNLTS+F
Sbjct: 52 RKHSAVLTDFGGVGDGKTLNTKAFNSAITNLSQYANDGGAQLIVPPGKWLTGSFNLTSHF 111
Query: 138 TLFLERGAVMLGSQ 151
TLFL++ +V+L SQ
Sbjct: 112 TLFLQKDSVILASQ 125
>gi|359490607|ref|XP_003634121.1| PREDICTED: LOW QUALITY PROTEIN: probable polygalacturonase-like
[Vitis vinifera]
Length = 492
Score = 91.7 bits (226), Expect = 9e-17, Method: Composition-based stats.
Identities = 40/74 (54%), Positives = 54/74 (72%)
Query: 78 RKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNF 137
R + + +FG GDG TSNT+AF+ A+ ++ F D GGA L VP G WLTGSFNLTS+F
Sbjct: 38 RNHSAVVMEFGAAGDGKTSNTKAFKSAIDHLSKFADVGGAHLIVPPGKWLTGSFNLTSHF 97
Query: 138 TLFLERGAVMLGSQ 151
TL++ + A++LGSQ
Sbjct: 98 TLYIHKDAIILGSQ 111
>gi|71535025|gb|AAZ32910.1| polygalacturonase-like protein [Medicago sativa]
Length = 206
Score = 91.7 bits (226), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 42/74 (56%), Positives = 57/74 (77%)
Query: 78 RKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNF 137
R ++S+KDFGGVGDG TSNT+AF+ A+ ++ +GG+QL VP G WLTGSF+L S+F
Sbjct: 7 RAHSVSLKDFGGVGDGKTSNTKAFKSAISHLSQNASEGGSQLYVPAGKWLTGSFSLISHF 66
Query: 138 TLFLERGAVMLGSQ 151
TL+L + AV+L SQ
Sbjct: 67 TLYLHKDAVLLASQ 80
>gi|224068502|ref|XP_002326133.1| predicted protein [Populus trichocarpa]
gi|222833326|gb|EEE71803.1| predicted protein [Populus trichocarpa]
Length = 495
Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 44/74 (59%), Positives = 51/74 (68%)
Query: 78 RKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNF 137
R VA ++ DFG VGDG T NTEAF +AV + +GG QLNVP G WLT FNLTS+
Sbjct: 73 RPVAFNLTDFGAVGDGATVNTEAFERAVSAISKLSKRGGGQLNVPPGRWLTAPFNLTSHM 132
Query: 138 TLFLERGAVMLGSQ 151
TLFL GAV+LG Q
Sbjct: 133 TLFLAEGAVILGIQ 146
>gi|225444665|ref|XP_002277239.1| PREDICTED: probable polygalacturonase [Vitis vinifera]
gi|297738532|emb|CBI27777.3| unnamed protein product [Vitis vinifera]
Length = 493
Score = 91.7 bits (226), Expect = 1e-16, Method: Composition-based stats.
Identities = 44/78 (56%), Positives = 53/78 (67%), Gaps = 1/78 (1%)
Query: 75 LPE-RKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNL 133
LP R ++ DFGGVGD T NTEAF +A+ + G KGG QLNVP G WLT FNL
Sbjct: 67 LPRLRPAVYNLTDFGGVGDSVTVNTEAFERAISAISKLGKKGGGQLNVPAGNWLTAPFNL 126
Query: 134 TSNFTLFLERGAVMLGSQ 151
TS+ TLFL++ AV+LG Q
Sbjct: 127 TSHMTLFLDQDAVILGIQ 144
>gi|413925949|gb|AFW65881.1| hypothetical protein ZEAMMB73_311601 [Zea mays]
Length = 213
Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 48/84 (57%), Positives = 57/84 (67%), Gaps = 3/84 (3%)
Query: 68 GLLGDQYLPERKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWL 127
GL ++ PE +SI DFGGVGDG T NT AFRKAV +Q +GG L+VP G WL
Sbjct: 39 GLAPAKHRPE---VISIADFGGVGDGRTLNTWAFRKAVYRIQHQRRRGGTTLHVPAGTWL 95
Query: 128 TGSFNLTSNFTLFLERGAVMLGSQ 151
GSFNLTS+ TLFL RGAV+ +Q
Sbjct: 96 AGSFNLTSHMTLFLARGAVLKATQ 119
>gi|255545184|ref|XP_002513653.1| polygalacturonase, putative [Ricinus communis]
gi|223547561|gb|EEF49056.1| polygalacturonase, putative [Ricinus communis]
Length = 473
Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 43/74 (58%), Positives = 54/74 (72%)
Query: 78 RKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNF 137
RK + + DFGGVGDG TSNT+ F+ A+ + + GGAQL +P G WLTGSFNLTS+F
Sbjct: 49 RKHSAVLTDFGGVGDGKTSNTKVFQTAIANLSKYSPDGGAQLIIPAGKWLTGSFNLTSHF 108
Query: 138 TLFLERGAVMLGSQ 151
TLFL + AV+L SQ
Sbjct: 109 TLFLHKEAVLLASQ 122
>gi|15233124|ref|NP_191708.1| polygalacturonase-like protein [Arabidopsis thaliana]
gi|42572755|ref|NP_974473.1| polygalacturonase-like protein [Arabidopsis thaliana]
gi|334186188|ref|NP_001190154.1| polygalacturonase-like protein [Arabidopsis thaliana]
gi|6850840|emb|CAB71079.1| putative protein [Arabidopsis thaliana]
gi|332646690|gb|AEE80211.1| polygalacturonase-like protein [Arabidopsis thaliana]
gi|332646691|gb|AEE80212.1| polygalacturonase-like protein [Arabidopsis thaliana]
gi|332646692|gb|AEE80213.1| polygalacturonase-like protein [Arabidopsis thaliana]
Length = 476
Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 42/74 (56%), Positives = 56/74 (75%)
Query: 78 RKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNF 137
R + SI ++GGVGDG T NT+AF+ AV ++ + +GGAQL VP G WLTGSFNLTS+F
Sbjct: 41 RSHSASITEYGGVGDGKTLNTKAFQSAVDHLSQYSSEGGAQLFVPAGKWLTGSFNLTSHF 100
Query: 138 TLFLERGAVMLGSQ 151
TLFL + A++L +Q
Sbjct: 101 TLFLHKDAILLAAQ 114
>gi|356534103|ref|XP_003535597.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 466
Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 44/74 (59%), Positives = 54/74 (72%)
Query: 78 RKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNF 137
RK + + DFGGVGDG TSNT+AF+ A+ + + GGA L VP G WLTG FNLTS+F
Sbjct: 44 RKHSAVLTDFGGVGDGITSNTKAFQSAISKLSQYASDGGAMLVVPPGKWLTGPFNLTSHF 103
Query: 138 TLFLERGAVMLGSQ 151
TLFL+ GAV+L SQ
Sbjct: 104 TLFLDFGAVILASQ 117
>gi|357511567|ref|XP_003626072.1| Polygalacturonase [Medicago truncatula]
gi|355501087|gb|AES82290.1| Polygalacturonase [Medicago truncatula]
Length = 466
Score = 91.3 bits (225), Expect = 1e-16, Method: Composition-based stats.
Identities = 41/73 (56%), Positives = 56/73 (76%)
Query: 78 RKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNF 137
R ++SI +FG VGDG T NT+AF+ A+ Y+ F DKGGA+L VP G WLTGSF+L S+
Sbjct: 39 RPHSVSITEFGAVGDGITLNTKAFQNAIFYLNSFSDKGGAKLFVPAGRWLTGSFDLISHL 98
Query: 138 TLFLERGAVMLGS 150
TL+L++ A++LGS
Sbjct: 99 TLWLDKDAIILGS 111
>gi|302143796|emb|CBI22657.3| unnamed protein product [Vitis vinifera]
Length = 342
Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 41/74 (55%), Positives = 56/74 (75%)
Query: 78 RKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNF 137
RK + + DFG GDG T NT+AF+ A+ ++ F D GGA+L VP G WLTGSFNLTS+F
Sbjct: 49 RKHSAVLTDFGATGDGKTINTKAFKSAIDHLSQFADDGGAELIVPPGKWLTGSFNLTSHF 108
Query: 138 TLFLERGAVMLGSQ 151
TL++++ AV+LG+Q
Sbjct: 109 TLYIDKDAVILGAQ 122
>gi|356560736|ref|XP_003548644.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 479
Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 42/74 (56%), Positives = 55/74 (74%)
Query: 78 RKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNF 137
R + S+ DFGGVGDG TSNT+AF+ A+ ++ + KGGAQL VP G WLTGSF+L S+F
Sbjct: 51 RAHSASLIDFGGVGDGNTSNTKAFQSAISHLSQYASKGGAQLYVPAGKWLTGSFSLISHF 110
Query: 138 TLFLERGAVMLGSQ 151
TL+L + A +L SQ
Sbjct: 111 TLYLNKDAFLLASQ 124
>gi|147795580|emb|CAN69988.1| hypothetical protein VITISV_024399 [Vitis vinifera]
Length = 509
Score = 91.3 bits (225), Expect = 1e-16, Method: Composition-based stats.
Identities = 44/78 (56%), Positives = 53/78 (67%), Gaps = 1/78 (1%)
Query: 75 LPE-RKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNL 133
LP R ++ DFGGVGD T NTEAF +A+ + G KGG QLNVP G WLT FNL
Sbjct: 67 LPRLRPAVYNLTDFGGVGDXVTVNTEAFERAISAISKLGKKGGGQLNVPAGNWLTAPFNL 126
Query: 134 TSNFTLFLERGAVMLGSQ 151
TS+ TLFL++ AV+LG Q
Sbjct: 127 TSHMTLFLDQDAVILGIQ 144
>gi|413925950|gb|AFW65882.1| hypothetical protein ZEAMMB73_311601 [Zea mays]
Length = 163
Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 48/84 (57%), Positives = 57/84 (67%), Gaps = 3/84 (3%)
Query: 68 GLLGDQYLPERKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWL 127
GL ++ PE +SI DFGGVGDG T NT AFRKAV +Q +GG L+VP G WL
Sbjct: 39 GLAPAKHRPE---VISIADFGGVGDGRTLNTWAFRKAVYRIQHQRRRGGTTLHVPAGTWL 95
Query: 128 TGSFNLTSNFTLFLERGAVMLGSQ 151
GSFNLTS+ TLFL RGAV+ +Q
Sbjct: 96 AGSFNLTSHMTLFLARGAVLKATQ 119
>gi|356558431|ref|XP_003547510.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 489
Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 44/74 (59%), Positives = 50/74 (67%)
Query: 78 RKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNF 137
R V + +FGGVGDG T NTEAF + V + GDKGG QLNVP G WLT FNLTS+
Sbjct: 67 RPVVFCLTEFGGVGDGVTLNTEAFERGVGAISKLGDKGGGQLNVPPGRWLTAPFNLTSHM 126
Query: 138 TLFLERGAVMLGSQ 151
TLFL R AV+L Q
Sbjct: 127 TLFLARDAVILAVQ 140
>gi|255589944|ref|XP_002535132.1| Polygalacturonase precursor, putative [Ricinus communis]
gi|223523955|gb|EEF27252.1| Polygalacturonase precursor, putative [Ricinus communis]
Length = 476
Score = 91.3 bits (225), Expect = 1e-16, Method: Composition-based stats.
Identities = 41/73 (56%), Positives = 56/73 (76%)
Query: 78 RKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNF 137
R +++I +FG VGDG T NT+AF+ A+ Y+ F DKGGA+L VP G WLTGSF+L S+
Sbjct: 49 RPHSVTITEFGAVGDGVTLNTKAFQNAIFYLNSFSDKGGAKLFVPAGRWLTGSFDLISHL 108
Query: 138 TLFLERGAVMLGS 150
TL+L++ AV+LGS
Sbjct: 109 TLWLDKNAVILGS 121
>gi|297817564|ref|XP_002876665.1| hypothetical protein ARALYDRAFT_907788 [Arabidopsis lyrata subsp.
lyrata]
gi|297322503|gb|EFH52924.1| hypothetical protein ARALYDRAFT_907788 [Arabidopsis lyrata subsp.
lyrata]
Length = 131
Score = 90.9 bits (224), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 42/74 (56%), Positives = 56/74 (75%)
Query: 77 ERKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSN 136
R ++SI +FG VGDG T NT+AF+ A+ Y+ F DKGGA+L VP G WLTGSF+L S+
Sbjct: 39 HRPHSVSITEFGAVGDGVTLNTKAFQNALFYLNSFSDKGGAKLFVPAGQWLTGSFDLISH 98
Query: 137 FTLFLERGAVMLGS 150
TL+L++GA +LGS
Sbjct: 99 LTLWLDKGATILGS 112
>gi|242032389|ref|XP_002463589.1| hypothetical protein SORBIDRAFT_01g002550 [Sorghum bicolor]
gi|241917443|gb|EER90587.1| hypothetical protein SORBIDRAFT_01g002550 [Sorghum bicolor]
Length = 459
Score = 90.9 bits (224), Expect = 1e-16, Method: Composition-based stats.
Identities = 41/73 (56%), Positives = 55/73 (75%)
Query: 78 RKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNF 137
R +++I +FG +GDG T NT+AF+ A+ Y+ F DKGGAQL VP G WLTGSFNL S+
Sbjct: 23 RPHSVTITEFGAIGDGVTLNTKAFQNAIFYLNSFADKGGAQLFVPAGRWLTGSFNLISHL 82
Query: 138 TLFLERGAVMLGS 150
TL L++ AV++GS
Sbjct: 83 TLSLDKDAVIIGS 95
>gi|357442057|ref|XP_003591306.1| Polygalacturonase-like protein [Medicago truncatula]
gi|355480354|gb|AES61557.1| Polygalacturonase-like protein [Medicago truncatula]
Length = 601
Score = 90.9 bits (224), Expect = 2e-16, Method: Composition-based stats.
Identities = 41/73 (56%), Positives = 56/73 (76%)
Query: 78 RKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNF 137
R ++SI +FG VGDG T NT+AF+ A+ Y+ + DKGGA+L VP G WLTGSF+L S+
Sbjct: 78 RPHSVSITEFGAVGDGITLNTKAFQNAIFYLNSYADKGGAKLFVPAGRWLTGSFDLISHL 137
Query: 138 TLFLERGAVMLGS 150
TL+L++ AV+LGS
Sbjct: 138 TLWLDKDAVILGS 150
>gi|359807069|ref|NP_001241086.1| uncharacterized protein LOC100817309 precursor [Glycine max]
gi|255636991|gb|ACU18828.1| unknown [Glycine max]
Length = 467
Score = 90.9 bits (224), Expect = 2e-16, Method: Composition-based stats.
Identities = 42/73 (57%), Positives = 55/73 (75%)
Query: 78 RKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNF 137
R ++SI +FG VGDG T NT+AF+ A+ Y+ F DKGGA+L VP G WLTGSF+L S+
Sbjct: 39 RPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGRWLTGSFDLISHL 98
Query: 138 TLFLERGAVMLGS 150
TL L++ AV+LGS
Sbjct: 99 TLSLDKDAVILGS 111
>gi|297817470|ref|XP_002876618.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
gi|297322456|gb|EFH52877.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
Length = 475
Score = 90.5 bits (223), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 42/74 (56%), Positives = 55/74 (74%)
Query: 78 RKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNF 137
R + SI ++GGVGDG T NT+AF+ AV ++ + GGAQL VP G WLTGSFNLTS+F
Sbjct: 41 RSHSASITEYGGVGDGKTLNTKAFQSAVDHLSQYSSDGGAQLFVPAGKWLTGSFNLTSHF 100
Query: 138 TLFLERGAVMLGSQ 151
TLFL + A++L +Q
Sbjct: 101 TLFLHKDAILLAAQ 114
>gi|6899921|emb|CAB71871.1| putative protein [Arabidopsis thaliana]
Length = 470
Score = 90.5 bits (223), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/99 (47%), Positives = 65/99 (65%), Gaps = 3/99 (3%)
Query: 52 FSGADGAIFDPDSCAAGLLGDQYLPERKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGF 111
F GA ++ + C L + P ++SI +FG VGDG T NT+AF+ A+ Y+ F
Sbjct: 16 FYGAWCSVGESLHCEYSNLASLHRPH---SVSITEFGAVGDGVTLNTKAFQNALFYLNSF 72
Query: 112 GDKGGAQLNVPEGLWLTGSFNLTSNFTLFLERGAVMLGS 150
DKGGA+L VP G WLTGSF+L S+ TL+L++GA +LGS
Sbjct: 73 SDKGGAKLFVPAGQWLTGSFDLISHLTLWLDKGATILGS 111
>gi|18412253|ref|NP_567126.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
gi|11762132|gb|AAG40344.1|AF324992_1 AT3g62110 [Arabidopsis thaliana]
gi|23397166|gb|AAN31866.1| unknown protein [Arabidopsis thaliana]
gi|332646790|gb|AEE80311.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
Length = 471
Score = 90.5 bits (223), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/99 (47%), Positives = 65/99 (65%), Gaps = 3/99 (3%)
Query: 52 FSGADGAIFDPDSCAAGLLGDQYLPERKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGF 111
F GA ++ + C L + P ++SI +FG VGDG T NT+AF+ A+ Y+ F
Sbjct: 16 FYGAWCSVGESLHCEYSNLASLHRPH---SVSITEFGAVGDGVTLNTKAFQNALFYLNSF 72
Query: 112 GDKGGAQLNVPEGLWLTGSFNLTSNFTLFLERGAVMLGS 150
DKGGA+L VP G WLTGSF+L S+ TL+L++GA +LGS
Sbjct: 73 SDKGGAKLFVPAGQWLTGSFDLISHLTLWLDKGATILGS 111
>gi|293332875|ref|NP_001170283.1| uncharacterized protein LOC100384246 precursor [Zea mays]
gi|224028521|gb|ACN33336.1| unknown [Zea mays]
gi|413925951|gb|AFW65883.1| hypothetical protein ZEAMMB73_311601 [Zea mays]
Length = 451
Score = 90.5 bits (223), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 48/84 (57%), Positives = 57/84 (67%), Gaps = 3/84 (3%)
Query: 68 GLLGDQYLPERKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWL 127
GL ++ PE +SI DFGGVGDG T NT AFRKAV +Q +GG L+VP G WL
Sbjct: 39 GLAPAKHRPE---VISIADFGGVGDGRTLNTWAFRKAVYRIQHQRRRGGTTLHVPAGTWL 95
Query: 128 TGSFNLTSNFTLFLERGAVMLGSQ 151
GSFNLTS+ TLFL RGAV+ +Q
Sbjct: 96 AGSFNLTSHMTLFLARGAVLKATQ 119
>gi|226491354|ref|NP_001148255.1| polygalacturonase [Zea mays]
gi|195616976|gb|ACG30318.1| polygalacturonase [Zea mays]
gi|219888097|gb|ACL54423.1| unknown [Zea mays]
gi|413941563|gb|AFW74212.1| polygalacturonase [Zea mays]
Length = 493
Score = 90.5 bits (223), Expect = 2e-16, Method: Composition-based stats.
Identities = 52/90 (57%), Positives = 60/90 (66%), Gaps = 3/90 (3%)
Query: 63 DSCAAGLLGDQYLPERKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQ-LNV 121
DSCA G P R+V S+++FG VGDG T NT AFR+AV + GG L+V
Sbjct: 71 DSCAGFYAGAG--PAREVWASVEEFGAVGDGATLNTAAFRRAVAELGARAVGGGGARLDV 128
Query: 122 PEGLWLTGSFNLTSNFTLFLERGAVMLGSQ 151
P G WLTGSFNLTS FTLFL RGAV+LGSQ
Sbjct: 129 PPGRWLTGSFNLTSRFTLFLHRGAVILGSQ 158
>gi|55295844|dbj|BAD67712.1| putative polygalacturonase [Oryza sativa Japonica Group]
gi|125553735|gb|EAY99340.1| hypothetical protein OsI_21311 [Oryza sativa Indica Group]
gi|125595774|gb|EAZ35554.1| hypothetical protein OsJ_19837 [Oryza sativa Japonica Group]
Length = 485
Score = 90.5 bits (223), Expect = 2e-16, Method: Composition-based stats.
Identities = 46/76 (60%), Positives = 54/76 (71%), Gaps = 2/76 (2%)
Query: 78 RKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGG--AQLNVPEGLWLTGSFNLTS 135
R S+ DFGGVGDGTTSNT AF+ AV ++ + +GG A L VP G WLTG FNLTS
Sbjct: 54 RAHTASLTDFGGVGDGTTSNTAAFKSAVDHLSQYSGEGGGGAMLYVPAGKWLTGPFNLTS 113
Query: 136 NFTLFLERGAVMLGSQ 151
+FTLFL AV+LGSQ
Sbjct: 114 HFTLFLHSDAVILGSQ 129
>gi|356501839|ref|XP_003519731.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 472
Score = 90.5 bits (223), Expect = 2e-16, Method: Composition-based stats.
Identities = 42/73 (57%), Positives = 55/73 (75%)
Query: 78 RKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNF 137
R ++SI +FG VGDG T NT+AF+ A+ Y+ F DKGGA+L VP G WLTGSF+L S+
Sbjct: 47 RPHSVSITEFGAVGDGITLNTKAFQNAIFYLNSFADKGGAKLFVPAGRWLTGSFDLISHL 106
Query: 138 TLFLERGAVMLGS 150
TL+L+ AV+LGS
Sbjct: 107 TLWLDNDAVILGS 119
>gi|297817560|ref|XP_002876663.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
gi|297322501|gb|EFH52922.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
Length = 471
Score = 90.5 bits (223), Expect = 2e-16, Method: Composition-based stats.
Identities = 42/73 (57%), Positives = 56/73 (76%)
Query: 78 RKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNF 137
R ++SI +FG VGDG T NT+AF+ A+ Y+ F DKGGA+L VP G WLTGSF+L S+
Sbjct: 39 RPHSVSITEFGAVGDGVTLNTKAFQNALFYLNSFSDKGGAKLFVPAGQWLTGSFDLISHL 98
Query: 138 TLFLERGAVMLGS 150
TL+L++GA +LGS
Sbjct: 99 TLWLDKGATILGS 111
>gi|224064770|ref|XP_002301554.1| predicted protein [Populus trichocarpa]
gi|222843280|gb|EEE80827.1| predicted protein [Populus trichocarpa]
Length = 458
Score = 90.1 bits (222), Expect = 3e-16, Method: Composition-based stats.
Identities = 41/73 (56%), Positives = 56/73 (76%)
Query: 78 RKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNF 137
R +++I +FG VGDG T NT+AF+ A+ Y+ F DKGGA+L VP G WLTGSF+L S+
Sbjct: 39 RPHSVTITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPTGRWLTGSFDLISHL 98
Query: 138 TLFLERGAVMLGS 150
TL+L++ AV+LGS
Sbjct: 99 TLWLDKDAVILGS 111
>gi|242043478|ref|XP_002459610.1| hypothetical protein SORBIDRAFT_02g007470 [Sorghum bicolor]
gi|241922987|gb|EER96131.1| hypothetical protein SORBIDRAFT_02g007470 [Sorghum bicolor]
Length = 499
Score = 90.1 bits (222), Expect = 3e-16, Method: Composition-based stats.
Identities = 44/74 (59%), Positives = 54/74 (72%)
Query: 77 ERKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSN 136
ER + SI DFG VGDG T NT+AF+ A+ Y+ F KGGAQL VP G WLTGSF+L S+
Sbjct: 55 ERPHSASITDFGAVGDGATLNTKAFQNALFYLNSFAKKGGAQLFVPAGRWLTGSFSLISH 114
Query: 137 FTLFLERGAVMLGS 150
TL L++ AV+LGS
Sbjct: 115 LTLSLDKDAVILGS 128
>gi|356530447|ref|XP_003533792.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 494
Score = 90.1 bits (222), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 43/74 (58%), Positives = 50/74 (67%)
Query: 78 RKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNF 137
R V + +FGGVGDG T NTEAF + V + GDKGG QLNVP G WLT FNLTS+
Sbjct: 72 RPVVFCLTEFGGVGDGVTLNTEAFERGVGAISKLGDKGGGQLNVPPGRWLTAPFNLTSHM 131
Query: 138 TLFLERGAVMLGSQ 151
TLFL R +V+L Q
Sbjct: 132 TLFLARDSVILAVQ 145
>gi|326521404|dbj|BAJ96905.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 476
Score = 89.7 bits (221), Expect = 3e-16, Method: Composition-based stats.
Identities = 41/73 (56%), Positives = 54/73 (73%)
Query: 78 RKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNF 137
R +++I +FG VGDG T NT+AF+ A+ Y+ F DKGGAQL VP G WLTG FNL S+
Sbjct: 39 RPHSVTITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAQLFVPAGRWLTGGFNLISHL 98
Query: 138 TLFLERGAVMLGS 150
TL L++ AV++GS
Sbjct: 99 TLSLDKDAVIIGS 111
>gi|168046254|ref|XP_001775589.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673007|gb|EDQ59536.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 483
Score = 89.7 bits (221), Expect = 3e-16, Method: Composition-based stats.
Identities = 42/74 (56%), Positives = 52/74 (70%)
Query: 78 RKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNF 137
R + SI DFG VGDGTT NT AF +A+ + + DKGGA+L +P G WLTGS L S+
Sbjct: 81 RPYSFSIIDFGAVGDGTTLNTHAFERAMLSLSNYADKGGAELYIPAGRWLTGSIRLISHL 140
Query: 138 TLFLERGAVMLGSQ 151
TLFLE GA +LGS+
Sbjct: 141 TLFLESGATILGSE 154
>gi|413941560|gb|AFW74209.1| hypothetical protein ZEAMMB73_002485 [Zea mays]
gi|413941561|gb|AFW74210.1| hypothetical protein ZEAMMB73_002485 [Zea mays]
Length = 280
Score = 89.7 bits (221), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/129 (47%), Positives = 74/129 (57%), Gaps = 5/129 (3%)
Query: 26 VLIVTLITIFSLEITK-KSVLSPKRVGFSGADGAIFDP-DSCAAGLLGDQYLPERKVAMS 83
V++ L T L +T+ + L P D P DSCA G P R+V S
Sbjct: 32 VMLSLLATASYLALTRFPAALLPIAPRSRPHDAPAHAPGDSCAGFYAGAG--PAREVWAS 89
Query: 84 IKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQ-LNVPEGLWLTGSFNLTSNFTLFLE 142
+++FG VGDG T NT AFR+AV + GG L+VP G WLTGSFNLTS FTLFL
Sbjct: 90 VEEFGAVGDGATLNTAAFRRAVAELGARAVGGGGARLDVPPGRWLTGSFNLTSRFTLFLH 149
Query: 143 RGAVMLGSQ 151
RGAV+LGSQ
Sbjct: 150 RGAVILGSQ 158
>gi|326496208|dbj|BAJ94566.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 476
Score = 89.7 bits (221), Expect = 3e-16, Method: Composition-based stats.
Identities = 41/73 (56%), Positives = 54/73 (73%)
Query: 78 RKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNF 137
R +++I +FG VGDG T NT+AF+ A+ Y+ F DKGGAQL VP G WLTG FNL S+
Sbjct: 39 RPHSVTITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAQLFVPAGRWLTGGFNLISHL 98
Query: 138 TLFLERGAVMLGS 150
TL L++ AV++GS
Sbjct: 99 TLSLDKDAVIIGS 111
>gi|168053514|ref|XP_001779181.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162669440|gb|EDQ56027.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 392
Score = 89.7 bits (221), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 42/74 (56%), Positives = 52/74 (70%)
Query: 78 RKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNF 137
R ++SI DFG VGDG T NT AF A+ Y++ + GGAQL +P GLWLTGS L S+
Sbjct: 1 RPHSVSITDFGAVGDGKTLNTHAFENAIFYLRSYAANGGAQLYIPVGLWLTGSITLISHL 60
Query: 138 TLFLERGAVMLGSQ 151
TLFLE GA +LGS+
Sbjct: 61 TLFLENGATILGSE 74
>gi|217073342|gb|ACJ85030.1| unknown [Medicago truncatula]
Length = 137
Score = 89.7 bits (221), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 41/73 (56%), Positives = 56/73 (76%)
Query: 78 RKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNF 137
R ++SI +FG VGDG T NT+AF+ A+ Y+ F DKGGA+L VP G WLTGSF+L S+
Sbjct: 39 RPHSVSITEFGAVGDGITLNTKAFQNAIFYLNSFSDKGGAKLFVPAGRWLTGSFDLISHL 98
Query: 138 TLFLERGAVMLGS 150
TL+L++ A++LGS
Sbjct: 99 TLWLDKDAIILGS 111
>gi|413941562|gb|AFW74211.1| hypothetical protein ZEAMMB73_002485 [Zea mays]
Length = 291
Score = 89.4 bits (220), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 61/129 (47%), Positives = 74/129 (57%), Gaps = 5/129 (3%)
Query: 26 VLIVTLITIFSLEITK-KSVLSPKRVGFSGADGAIFDP-DSCAAGLLGDQYLPERKVAMS 83
V++ L T L +T+ + L P D P DSCA G P R+V S
Sbjct: 32 VMLSLLATASYLALTRFPAALLPIAPRSRPHDAPAHAPGDSCAGFYAGAG--PAREVWAS 89
Query: 84 IKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQ-LNVPEGLWLTGSFNLTSNFTLFLE 142
+++FG VGDG T NT AFR+AV + GG L+VP G WLTGSFNLTS FTLFL
Sbjct: 90 VEEFGAVGDGATLNTAAFRRAVAELGARAVGGGGARLDVPPGRWLTGSFNLTSRFTLFLH 149
Query: 143 RGAVMLGSQ 151
RGAV+LGSQ
Sbjct: 150 RGAVILGSQ 158
>gi|449452594|ref|XP_004144044.1| PREDICTED: probable polygalacturonase-like [Cucumis sativus]
Length = 493
Score = 89.4 bits (220), Expect = 4e-16, Method: Composition-based stats.
Identities = 42/74 (56%), Positives = 50/74 (67%)
Query: 78 RKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNF 137
R ++ DFG VGDG T NT+AF KA+ + KGG QLNVP G WLT FNLTS+
Sbjct: 71 RPAVFNLTDFGAVGDGVTLNTKAFEKAILAISKLRTKGGGQLNVPAGRWLTAPFNLTSHL 130
Query: 138 TLFLERGAVMLGSQ 151
TLFL+ GAV+LG Q
Sbjct: 131 TLFLDEGAVILGIQ 144
>gi|449500524|ref|XP_004161121.1| PREDICTED: probable polygalacturonase-like [Cucumis sativus]
Length = 493
Score = 89.4 bits (220), Expect = 4e-16, Method: Composition-based stats.
Identities = 42/74 (56%), Positives = 50/74 (67%)
Query: 78 RKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNF 137
R ++ DFG VGDG T NT+AF KA+ + KGG QLNVP G WLT FNLTS+
Sbjct: 71 RPAVFNLTDFGAVGDGVTLNTKAFEKAILAISKLRTKGGGQLNVPAGRWLTAPFNLTSHL 130
Query: 138 TLFLERGAVMLGSQ 151
TLFL+ GAV+LG Q
Sbjct: 131 TLFLDEGAVILGIQ 144
>gi|357137810|ref|XP_003570492.1| PREDICTED: probable polygalacturonase-like [Brachypodium
distachyon]
Length = 496
Score = 89.4 bits (220), Expect = 4e-16, Method: Composition-based stats.
Identities = 42/72 (58%), Positives = 50/72 (69%)
Query: 78 RKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNF 137
R A ++ DFGGVGDG T NT+AF +AV + D+GG QLNVP G WLT FNLTS+
Sbjct: 74 RPGAYNLTDFGGVGDGRTLNTQAFERAVEAIAALADRGGGQLNVPPGRWLTAPFNLTSHM 133
Query: 138 TLFLERGAVMLG 149
TLFL GA +LG
Sbjct: 134 TLFLAEGAEILG 145
>gi|356566220|ref|XP_003551332.1| PREDICTED: uncharacterized protein LOC100780755 [Glycine max]
Length = 366
Score = 89.4 bits (220), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 43/74 (58%), Positives = 54/74 (72%)
Query: 78 RKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNF 137
RK + + DFGGVGDG TSNT+ F+ A+ + + GGA L VP G WLTGSFNLTS+F
Sbjct: 135 RKHSAVLTDFGGVGDGKTSNTKGFQYAISNLSHYASDGGALLVVPPGKWLTGSFNLTSHF 194
Query: 138 TLFLERGAVMLGSQ 151
TLFL++ A +LGSQ
Sbjct: 195 TLFLQKEATILGSQ 208
>gi|326524051|dbj|BAJ97036.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 482
Score = 89.4 bits (220), Expect = 5e-16, Method: Composition-based stats.
Identities = 64/139 (46%), Positives = 81/139 (58%), Gaps = 13/139 (9%)
Query: 19 RPSWATIVLIVTLITIFSLEITKKSVLSPKRV------GFSGADGAIFDPDSCAAGLLGD 72
RPS +V +V L + + L +T+ +P G GA+ DSCA G
Sbjct: 17 RPSAPLVVFLVLLASCY-LALTRLPAAAPLAALIAPSSGHGSGHGAV---DSCAGFYRGA 72
Query: 73 QYLPERKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFN 132
R V S+++FG VGDG TSNT AF++AV ++ G GGA+L VP G WLTGSFN
Sbjct: 73 G---RRAVTASVEEFGAVGDGVTSNTAAFQRAVAALEERGGGGGARLEVPAGRWLTGSFN 129
Query: 133 LTSNFTLFLERGAVMLGSQ 151
LTS FTLFL GAV+LGSQ
Sbjct: 130 LTSRFTLFLHHGAVILGSQ 148
>gi|297816102|ref|XP_002875934.1| hypothetical protein ARALYDRAFT_906150 [Arabidopsis lyrata subsp.
lyrata]
gi|297321772|gb|EFH52193.1| hypothetical protein ARALYDRAFT_906150 [Arabidopsis lyrata subsp.
lyrata]
Length = 443
Score = 89.4 bits (220), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 41/74 (55%), Positives = 55/74 (74%)
Query: 78 RKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNF 137
R+ + + DFG +GDG TSNT+AFR+A+R + GG+QL VP+G WLTGSFNLTS+F
Sbjct: 51 RRQSAILTDFGAIGDGKTSNTKAFREAIRNLTSRAGDGGSQLIVPKGKWLTGSFNLTSHF 110
Query: 138 TLFLERGAVMLGSQ 151
TL ++ GA +L SQ
Sbjct: 111 TLHIKEGATILASQ 124
>gi|255550387|ref|XP_002516244.1| polygalacturonase, putative [Ricinus communis]
gi|223544730|gb|EEF46246.1| polygalacturonase, putative [Ricinus communis]
Length = 494
Score = 89.4 bits (220), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 42/72 (58%), Positives = 51/72 (70%)
Query: 78 RKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNF 137
R VA ++ DFGGVGDG T NTEAF +AV + G KGG QLNVP G W+T FNLTS+
Sbjct: 72 RPVAFNLTDFGGVGDGVTLNTEAFERAVLAISKLGKKGGGQLNVPPGRWVTAPFNLTSHM 131
Query: 138 TLFLERGAVMLG 149
TLFL +++LG
Sbjct: 132 TLFLAEDSIILG 143
>gi|224142779|ref|XP_002324728.1| predicted protein [Populus trichocarpa]
gi|222866162|gb|EEF03293.1| predicted protein [Populus trichocarpa]
Length = 495
Score = 89.0 bits (219), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 43/74 (58%), Positives = 50/74 (67%)
Query: 78 RKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNF 137
R VA ++ DFG VGDG T NTEAF +AV + +GG QLNVP G WLT FNLTS+
Sbjct: 73 RPVAFNLTDFGAVGDGVTLNTEAFERAVSAISKLARRGGGQLNVPPGKWLTAPFNLTSHM 132
Query: 138 TLFLERGAVMLGSQ 151
TLFL AV+LG Q
Sbjct: 133 TLFLAEDAVILGIQ 146
>gi|356533489|ref|XP_003535296.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 472
Score = 89.0 bits (219), Expect = 7e-16, Method: Composition-based stats.
Identities = 42/73 (57%), Positives = 54/73 (73%)
Query: 78 RKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNF 137
R ++SI +FG VGDG T NT AF+ A+ Y+ F DKGGA+L VP G WLTGSF+L S+
Sbjct: 47 RPHSVSITEFGAVGDGITLNTIAFQNAIFYLNSFADKGGAKLFVPAGRWLTGSFDLISHL 106
Query: 138 TLFLERGAVMLGS 150
TL+L+ AV+LGS
Sbjct: 107 TLWLDNDAVILGS 119
>gi|223948047|gb|ACN28107.1| unknown [Zea mays]
gi|414873755|tpg|DAA52312.1| TPA: polygalacturonase isoform 1 [Zea mays]
gi|414873756|tpg|DAA52313.1| TPA: polygalacturonase isoform 2 [Zea mays]
Length = 477
Score = 88.6 bits (218), Expect = 7e-16, Method: Composition-based stats.
Identities = 40/73 (54%), Positives = 55/73 (75%)
Query: 78 RKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNF 137
R +++I +FG VGDG T NT+AF+ A+ Y+ F DKGGAQL VP G WLTGSF+L S+
Sbjct: 39 RPHSVTITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAQLFVPAGRWLTGSFHLISHL 98
Query: 138 TLFLERGAVMLGS 150
TL L++ A+++GS
Sbjct: 99 TLSLDKDAIIIGS 111
>gi|226497942|ref|NP_001151479.1| polygalacturonase precursor [Zea mays]
gi|195647062|gb|ACG42999.1| polygalacturonase [Zea mays]
Length = 477
Score = 88.6 bits (218), Expect = 7e-16, Method: Composition-based stats.
Identities = 40/73 (54%), Positives = 55/73 (75%)
Query: 78 RKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNF 137
R +++I +FG VGDG T NT+AF+ A+ Y+ F DKGGAQL VP G WLTGSF+L S+
Sbjct: 39 RPHSVTITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAQLFVPAGRWLTGSFHLISHL 98
Query: 138 TLFLERGAVMLGS 150
TL L++ A+++GS
Sbjct: 99 TLSLDKDAIIIGS 111
>gi|168006626|ref|XP_001756010.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162692940|gb|EDQ79295.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 423
Score = 88.6 bits (218), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 43/77 (55%), Positives = 52/77 (67%)
Query: 75 LPERKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLT 134
L R +SI DFG VGDG T NT+AF A++Y+ D GAQL +P G WLTGS NL
Sbjct: 16 LLRRPKKVSITDFGAVGDGKTLNTKAFENALQYLHSNADSDGAQLTIPAGRWLTGSINLI 75
Query: 135 SNFTLFLERGAVMLGSQ 151
S+ TLFLE GA +LGS+
Sbjct: 76 SHLTLFLENGANILGSE 92
>gi|357111082|ref|XP_003557344.1| PREDICTED: probable polygalacturonase-like [Brachypodium
distachyon]
Length = 479
Score = 88.2 bits (217), Expect = 9e-16, Method: Composition-based stats.
Identities = 41/73 (56%), Positives = 55/73 (75%)
Query: 78 RKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNF 137
R ++SI +FG VGDG T NT+AF+ A+ Y+ F +KGGAQL VP G WLTGSF+L S+
Sbjct: 40 RPHSVSITEFGAVGDGMTRNTKAFQNAIFYLSSFANKGGAQLFVPAGRWLTGSFSLVSHL 99
Query: 138 TLFLERGAVMLGS 150
T+ L++ AV+LGS
Sbjct: 100 TVSLDKDAVILGS 112
>gi|224130826|ref|XP_002320934.1| predicted protein [Populus trichocarpa]
gi|222861707|gb|EEE99249.1| predicted protein [Populus trichocarpa]
Length = 427
Score = 88.2 bits (217), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 40/73 (54%), Positives = 56/73 (76%)
Query: 78 RKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNF 137
R +++I +FG VGDG T NT+AF+ A+ Y+ F DKGGA+L VP G WLTGSF+L S+
Sbjct: 32 RPHSVAITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHL 91
Query: 138 TLFLERGAVMLGS 150
TL+L++ A++LGS
Sbjct: 92 TLWLDKDAIILGS 104
>gi|224032157|gb|ACN35154.1| unknown [Zea mays]
Length = 430
Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 40/73 (54%), Positives = 55/73 (75%)
Query: 78 RKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNF 137
R +++I +FG VGDG T NT+AF+ A+ Y+ F DKGGAQL VP G WLTGSF+L S+
Sbjct: 39 RPHSVTITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAQLFVPAGRWLTGSFHLISHL 98
Query: 138 TLFLERGAVMLGS 150
TL L++ A+++GS
Sbjct: 99 TLSLDKDAIIIGS 111
>gi|297819542|ref|XP_002877654.1| hypothetical protein ARALYDRAFT_323502 [Arabidopsis lyrata subsp.
lyrata]
gi|297323492|gb|EFH53913.1| hypothetical protein ARALYDRAFT_323502 [Arabidopsis lyrata subsp.
lyrata]
Length = 1112
Score = 87.8 bits (216), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/83 (54%), Positives = 57/83 (68%), Gaps = 2/83 (2%)
Query: 71 GDQYLP--ERKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLT 128
G +YL RK + DFG +GDG TSNT+AFR+A+ + GG QL VP G WLT
Sbjct: 838 GIEYLALNCRKHRAVLTDFGAIGDGKTSNTKAFREAITKLTTKAVDGGVQLIVPPGNWLT 897
Query: 129 GSFNLTSNFTLFLERGAVMLGSQ 151
GSFNLTS+FTLF+++GA +L SQ
Sbjct: 898 GSFNLTSHFTLFIQQGATILASQ 920
>gi|222636745|gb|EEE66877.1| hypothetical protein OsJ_23693 [Oryza sativa Japonica Group]
Length = 506
Score = 87.8 bits (216), Expect = 1e-15, Method: Composition-based stats.
Identities = 41/74 (55%), Positives = 54/74 (72%)
Query: 78 RKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNF 137
R ++SI +FG V DG T NT+AF+ A+ Y+ F DKGGA+L VP G WLTGSFNL S+
Sbjct: 69 RPHSVSITEFGAVNDGVTLNTKAFKNAIFYLSSFADKGGAELFVPAGRWLTGSFNLISHL 128
Query: 138 TLFLERGAVMLGSQ 151
T+ L+ AV++GSQ
Sbjct: 129 TVSLDADAVIIGSQ 142
>gi|218199365|gb|EEC81792.1| hypothetical protein OsI_25505 [Oryza sativa Indica Group]
Length = 506
Score = 87.8 bits (216), Expect = 1e-15, Method: Composition-based stats.
Identities = 41/74 (55%), Positives = 54/74 (72%)
Query: 78 RKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNF 137
R ++SI +FG V DG T NT+AF+ A+ Y+ F DKGGA+L VP G WLTGSFNL S+
Sbjct: 69 RPHSVSITEFGAVNDGVTLNTKAFKNAIFYLSSFADKGGAELFVPAGRWLTGSFNLISHL 128
Query: 138 TLFLERGAVMLGSQ 151
T+ L+ AV++GSQ
Sbjct: 129 TVSLDADAVIIGSQ 142
>gi|357122663|ref|XP_003563034.1| PREDICTED: probable polygalacturonase-like [Brachypodium
distachyon]
Length = 475
Score = 87.8 bits (216), Expect = 1e-15, Method: Composition-based stats.
Identities = 40/73 (54%), Positives = 54/73 (73%)
Query: 78 RKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNF 137
R +++I +FG VGDG NT+AF+ A+ Y+ F DKGGAQL VP G WLTGSF+L S+
Sbjct: 39 RPHSVTITEFGAVGDGVALNTKAFQNAIFYLNSFADKGGAQLFVPAGRWLTGSFSLISHL 98
Query: 138 TLFLERGAVMLGS 150
TL L++ AV++GS
Sbjct: 99 TLSLDKDAVIIGS 111
>gi|297816204|ref|XP_002875985.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
gi|297321823|gb|EFH52244.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
Length = 471
Score = 87.4 bits (215), Expect = 2e-15, Method: Composition-based stats.
Identities = 42/73 (57%), Positives = 54/73 (73%)
Query: 78 RKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNF 137
R ++SI +FG VGDG T NT+AF+ A+ Y F DKGGA+L VP G WLTGSF+L S+
Sbjct: 39 RPHSVSITEFGAVGDGVTLNTKAFQNALFYPNSFSDKGGAKLFVPAGQWLTGSFDLISHL 98
Query: 138 TLFLERGAVMLGS 150
TL+L+ GA +LGS
Sbjct: 99 TLWLDSGATILGS 111
>gi|30692538|gb|AAP33475.1| polygalacturonase-like protein [Fragaria x ananassa]
Length = 474
Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 41/74 (55%), Positives = 55/74 (74%)
Query: 78 RKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNF 137
R + S+ +FGGVGDG TSNT+AF+ A+ + + GGAQL VP G WLTGSF+LTS+F
Sbjct: 44 RAHSASLTEFGGVGDGKTSNTKAFQTAISKLSQYATDGGAQLFVPAGKWLTGSFSLTSHF 103
Query: 138 TLFLERGAVMLGSQ 151
TL+L + +V+L SQ
Sbjct: 104 TLYLHKDSVLLASQ 117
>gi|302753776|ref|XP_002960312.1| hypothetical protein SELMODRAFT_74934 [Selaginella moellendorffii]
gi|300171251|gb|EFJ37851.1| hypothetical protein SELMODRAFT_74934 [Selaginella moellendorffii]
Length = 455
Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/74 (56%), Positives = 52/74 (70%)
Query: 78 RKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNF 137
R SI DFGGV DG T NT+AF+KA+ ++ FG GGA L +P G WLTG FNLTS+
Sbjct: 55 RPRVFSIADFGGVSDGITLNTKAFQKAIDHIGSFGKLGGATLYIPRGKWLTGCFNLTSHM 114
Query: 138 TLFLERGAVMLGSQ 151
TLFLE+ A +L S+
Sbjct: 115 TLFLEQDATILASE 128
>gi|302767960|ref|XP_002967400.1| hypothetical protein SELMODRAFT_87398 [Selaginella moellendorffii]
gi|300165391|gb|EFJ31999.1| hypothetical protein SELMODRAFT_87398 [Selaginella moellendorffii]
Length = 426
Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/74 (56%), Positives = 52/74 (70%)
Query: 78 RKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNF 137
R SI DFGGV DG T NT+AF+KA+ ++ FG GGA L +P G WLTG FNLTS+
Sbjct: 26 RPRVFSIADFGGVSDGITLNTKAFQKAIDHIGSFGKLGGATLYIPRGKWLTGCFNLTSHM 85
Query: 138 TLFLERGAVMLGSQ 151
TLFLE+ A +L S+
Sbjct: 86 TLFLEQDATILASE 99
>gi|6723387|emb|CAB66396.1| putative protein [Arabidopsis thaliana]
Length = 1113
Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 40/74 (54%), Positives = 53/74 (71%)
Query: 78 RKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNF 137
RK + + +FG +GDG SNT+AFR+A+ + GG QL VP G WLTGSFNLTS+F
Sbjct: 846 RKHSAVLTNFGAIGDGKPSNTKAFREAISKLTPLAADGGVQLIVPPGSWLTGSFNLTSHF 905
Query: 138 TLFLERGAVMLGSQ 151
TLF+++GA +L SQ
Sbjct: 906 TLFIQQGATILASQ 919
>gi|42569272|ref|NP_179968.2| Pectin lyase-like protein [Arabidopsis thaliana]
gi|91806252|gb|ABE65854.1| glycoside hydrolase family 28 protein/polygalacturonase family
protein [Arabidopsis thaliana]
gi|330252406|gb|AEC07500.1| Pectin lyase-like protein [Arabidopsis thaliana]
Length = 477
Score = 86.7 bits (213), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 41/74 (55%), Positives = 53/74 (71%)
Query: 78 RKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNF 137
RK + +FG VGDG TSNT+AF++A+ + GG QL VP G WLTGSFNLTS+F
Sbjct: 52 RKHTAVLTEFGAVGDGKTSNTKAFKEAITKLAPKAADGGVQLIVPPGKWLTGSFNLTSHF 111
Query: 138 TLFLERGAVMLGSQ 151
TLF+++GA +L SQ
Sbjct: 112 TLFIQKGATILASQ 125
>gi|3738338|gb|AAC63679.1| putative polygalacturonase [Arabidopsis thaliana]
Length = 466
Score = 86.7 bits (213), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 41/74 (55%), Positives = 53/74 (71%)
Query: 78 RKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNF 137
RK + +FG VGDG TSNT+AF++A+ + GG QL VP G WLTGSFNLTS+F
Sbjct: 41 RKHTAVLTEFGAVGDGKTSNTKAFKEAITKLAPKAADGGVQLIVPPGKWLTGSFNLTSHF 100
Query: 138 TLFLERGAVMLGSQ 151
TLF+++GA +L SQ
Sbjct: 101 TLFIQKGATILASQ 114
>gi|116831111|gb|ABK28510.1| unknown [Arabidopsis thaliana]
Length = 478
Score = 86.7 bits (213), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 41/74 (55%), Positives = 53/74 (71%)
Query: 78 RKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNF 137
RK + +FG VGDG TSNT+AF++A+ + GG QL VP G WLTGSFNLTS+F
Sbjct: 52 RKHTAVLTEFGAVGDGKTSNTKAFKEAITKLAPKAADGGVQLIVPPGKWLTGSFNLTSHF 111
Query: 138 TLFLERGAVMLGSQ 151
TLF+++GA +L SQ
Sbjct: 112 TLFIQKGATILASQ 125
>gi|168058134|ref|XP_001781065.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162667462|gb|EDQ54091.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 446
Score = 86.7 bits (213), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 41/74 (55%), Positives = 51/74 (68%)
Query: 78 RKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNF 137
R ++SI +FG VGDG T NT AF A+ Y++ + DKGG QL +P G WLTGS L S+
Sbjct: 45 RPHSVSISEFGAVGDGKTLNTHAFENAMFYLRTYADKGGVQLYIPAGRWLTGSIKLISHL 104
Query: 138 TLFLERGAVMLGSQ 151
TLFLE A +LGSQ
Sbjct: 105 TLFLENEATILGSQ 118
>gi|168005670|ref|XP_001755533.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162693240|gb|EDQ79593.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 393
Score = 86.7 bits (213), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 41/74 (55%), Positives = 51/74 (68%)
Query: 78 RKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNF 137
R ++SI +FG VGDG T NT AF A+ Y++ + DKGG QL +P G WLTGS L S+
Sbjct: 1 RPHSVSISEFGAVGDGKTLNTHAFENAMFYLRTYADKGGVQLYIPAGRWLTGSIKLISHL 60
Query: 138 TLFLERGAVMLGSQ 151
TLFLE A +LGSQ
Sbjct: 61 TLFLENEATILGSQ 74
>gi|357139453|ref|XP_003571296.1| PREDICTED: probable polygalacturonase-like [Brachypodium
distachyon]
Length = 485
Score = 86.3 bits (212), Expect = 4e-15, Method: Composition-based stats.
Identities = 48/91 (52%), Positives = 58/91 (63%), Gaps = 2/91 (2%)
Query: 63 DSCAAGLLGDQYLPERKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGA--QLN 120
+SCA G+ R + S+++FG VGDG TSNT AFR+AV ++ G L
Sbjct: 58 ESCAGFYRGEGAGGRRAASASVEEFGAVGDGVTSNTAAFRRAVAALEQRAAAAGGGAMLE 117
Query: 121 VPEGLWLTGSFNLTSNFTLFLERGAVMLGSQ 151
VP G WLTGSFNLTS FTLFL GAV+LGSQ
Sbjct: 118 VPPGRWLTGSFNLTSRFTLFLHHGAVILGSQ 148
>gi|108711940|gb|ABF99735.1| glycoside hydrolase family 28 protein, putative, expressed [Oryza
sativa Japonica Group]
gi|218194041|gb|EEC76468.1| hypothetical protein OsI_14200 [Oryza sativa Indica Group]
gi|222626115|gb|EEE60247.1| hypothetical protein OsJ_13254 [Oryza sativa Japonica Group]
Length = 460
Score = 86.3 bits (212), Expect = 4e-15, Method: Composition-based stats.
Identities = 40/73 (54%), Positives = 54/73 (73%)
Query: 78 RKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNF 137
R +++I +FG VGDG T NT+AF+ A+ Y+ F DKGGAQL VP G WLTGSF+L S+
Sbjct: 23 RPHSVTITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAQLFVPAGRWLTGSFSLISHL 82
Query: 138 TLFLERGAVMLGS 150
TL L++ A ++GS
Sbjct: 83 TLSLDKDAEIIGS 95
>gi|115456423|ref|NP_001051812.1| Os03g0833800 [Oryza sativa Japonica Group]
gi|40714685|gb|AAR88591.1| putative polygalacturonase [Oryza sativa Japonica Group]
gi|108711938|gb|ABF99733.1| glycoside hydrolase family 28 protein, putative, expressed [Oryza
sativa Japonica Group]
gi|108711939|gb|ABF99734.1| glycoside hydrolase family 28 protein, putative, expressed [Oryza
sativa Japonica Group]
gi|113550283|dbj|BAF13726.1| Os03g0833800 [Oryza sativa Japonica Group]
gi|215694675|dbj|BAG89866.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 476
Score = 86.3 bits (212), Expect = 4e-15, Method: Composition-based stats.
Identities = 40/73 (54%), Positives = 54/73 (73%)
Query: 78 RKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNF 137
R +++I +FG VGDG T NT+AF+ A+ Y+ F DKGGAQL VP G WLTGSF+L S+
Sbjct: 39 RPHSVTITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAQLFVPAGRWLTGSFSLISHL 98
Query: 138 TLFLERGAVMLGS 150
TL L++ A ++GS
Sbjct: 99 TLSLDKDAEIIGS 111
>gi|308080756|ref|NP_001183080.1| uncharacterized protein LOC100501436 precursor [Zea mays]
gi|238009236|gb|ACR35653.1| unknown [Zea mays]
gi|414884141|tpg|DAA60155.1| TPA: hypothetical protein ZEAMMB73_186239 [Zea mays]
Length = 490
Score = 85.9 bits (211), Expect = 5e-15, Method: Composition-based stats.
Identities = 42/74 (56%), Positives = 53/74 (71%)
Query: 77 ERKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSN 136
ER S+ DFG VGDG T NT+AF+ A+ ++ F KGGAQL VP G WLTGSF+L S+
Sbjct: 48 ERPHRASVTDFGAVGDGATLNTKAFQNALFHLDSFAKKGGAQLFVPAGRWLTGSFSLISH 107
Query: 137 FTLFLERGAVMLGS 150
TL L++ AV+LGS
Sbjct: 108 LTLSLDKDAVILGS 121
>gi|297821649|ref|XP_002878707.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
gi|297324546|gb|EFH54966.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
Length = 477
Score = 85.1 bits (209), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 40/74 (54%), Positives = 53/74 (71%)
Query: 78 RKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNF 137
RK + +FG VGDG TSNT+AF++A+ + GG QL VP G WLTGSFNL+S+F
Sbjct: 52 RKHTAVLTEFGAVGDGKTSNTKAFKEAITKLAPKAADGGVQLIVPPGKWLTGSFNLSSHF 111
Query: 138 TLFLERGAVMLGSQ 151
TLF+++GA +L SQ
Sbjct: 112 TLFIQKGATILASQ 125
>gi|195644726|gb|ACG41831.1| glycoside hydrolase, family 28 [Zea mays]
Length = 439
Score = 85.1 bits (209), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 45/76 (59%), Positives = 54/76 (71%), Gaps = 2/76 (2%)
Query: 78 RKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGA--QLNVPEGLWLTGSFNLTS 135
R S+ DFGGVGDGTTSNT AFR AV ++ + +GG L VP G WLTG FNLTS
Sbjct: 8 RAHTASVADFGGVGDGTTSNTAAFRSAVDHLSQYSGEGGGGGMLYVPAGKWLTGPFNLTS 67
Query: 136 NFTLFLERGAVMLGSQ 151
+FTL+L + AV+LGSQ
Sbjct: 68 HFTLYLHQDAVILGSQ 83
>gi|242063272|ref|XP_002452925.1| hypothetical protein SORBIDRAFT_04g035020 [Sorghum bicolor]
gi|241932756|gb|EES05901.1| hypothetical protein SORBIDRAFT_04g035020 [Sorghum bicolor]
Length = 500
Score = 85.1 bits (209), Expect = 9e-15, Method: Composition-based stats.
Identities = 39/69 (56%), Positives = 47/69 (68%)
Query: 81 AMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLF 140
A ++ DFG VGDG NTEAF +AV + ++GG QLNVP G WLT FNLTS+ TLF
Sbjct: 81 AYNLTDFGAVGDGRAVNTEAFERAVETIAALAERGGGQLNVPPGRWLTAPFNLTSHMTLF 140
Query: 141 LERGAVMLG 149
L GA +LG
Sbjct: 141 LAEGAEILG 149
>gi|115445377|ref|NP_001046468.1| Os02g0256100 [Oryza sativa Japonica Group]
gi|50251675|dbj|BAD29699.1| putative polygalacturonase [Oryza sativa Japonica Group]
gi|50252020|dbj|BAD27952.1| putative polygalacturonase [Oryza sativa Japonica Group]
gi|113535999|dbj|BAF08382.1| Os02g0256100 [Oryza sativa Japonica Group]
gi|215686497|dbj|BAG87758.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215765347|dbj|BAG87044.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222622550|gb|EEE56682.1| hypothetical protein OsJ_06128 [Oryza sativa Japonica Group]
Length = 443
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/74 (59%), Positives = 51/74 (68%)
Query: 78 RKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNF 137
R +SI +FGGVGDG T NT AF KAV +Q +GG L VP G WLTGSFNLTS+
Sbjct: 39 RPETVSIAEFGGVGDGRTVNTWAFHKAVYRIQHQRRRGGTTLLVPAGTWLTGSFNLTSHM 98
Query: 138 TLFLERGAVMLGSQ 151
TLFL RGAV+ +Q
Sbjct: 99 TLFLARGAVLKATQ 112
>gi|115450425|ref|NP_001048813.1| Os03g0124900 [Oryza sativa Japonica Group]
gi|108705945|gb|ABF93740.1| polygalacturonase, putative, expressed [Oryza sativa Japonica
Group]
gi|113547284|dbj|BAF10727.1| Os03g0124900 [Oryza sativa Japonica Group]
gi|125584758|gb|EAZ25422.1| hypothetical protein OsJ_09236 [Oryza sativa Japonica Group]
Length = 458
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/91 (51%), Positives = 55/91 (60%), Gaps = 4/91 (4%)
Query: 65 CAAGLLGDQYLPE----RKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLN 120
CA G+ P RK I ++GGVGDG SNT AF KAV + GGA L
Sbjct: 19 CACGVAASPSSPAGAGCRKHVARITEYGGVGDGRRSNTAAFAKAVADLSLRAGDGGAALV 78
Query: 121 VPEGLWLTGSFNLTSNFTLFLERGAVMLGSQ 151
VP+G WLTG FNLTS+FTLFL+ GA +L SQ
Sbjct: 79 VPKGKWLTGPFNLTSHFTLFLDHGAEILASQ 109
>gi|125541363|gb|EAY87758.1| hypothetical protein OsI_09176 [Oryza sativa Indica Group]
Length = 545
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/72 (55%), Positives = 49/72 (68%)
Query: 78 RKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNF 137
R A + DFGGVGDG NTEAF +AV+ + ++GG QLNVP G WLT FNLTS+
Sbjct: 80 RPKAYELTDFGGVGDGRAVNTEAFERAVKAIAALAERGGGQLNVPLGRWLTAPFNLTSHM 139
Query: 138 TLFLERGAVMLG 149
TLFL G+ +LG
Sbjct: 140 TLFLAEGSEILG 151
>gi|125538851|gb|EAY85246.1| hypothetical protein OsI_06620 [Oryza sativa Indica Group]
Length = 443
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/74 (59%), Positives = 51/74 (68%)
Query: 78 RKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNF 137
R +SI +FGGVGDG T NT AF KAV +Q +GG L VP G WLTGSFNLTS+
Sbjct: 39 RPETVSIAEFGGVGDGRTVNTWAFHKAVYRIQHQRRRGGTTLLVPAGTWLTGSFNLTSHM 98
Query: 138 TLFLERGAVMLGSQ 151
TLFL RGAV+ +Q
Sbjct: 99 TLFLARGAVLKATQ 112
>gi|359490609|ref|XP_002273177.2| PREDICTED: probable polygalacturonase-like [Vitis vinifera]
Length = 465
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 41/74 (55%), Positives = 52/74 (70%)
Query: 78 RKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNF 137
RK + + DFG GDG T NT+AF+ A+ + GGAQL VP G WLTGSFNLTS+F
Sbjct: 42 RKHSAVLTDFGAKGDGKTMNTKAFKSAIANLSQVAGDGGAQLIVPPGKWLTGSFNLTSHF 101
Query: 138 TLFLERGAVMLGSQ 151
TLF+ + AV+LG+Q
Sbjct: 102 TLFVHKDAVILGAQ 115
>gi|219887583|gb|ACL54166.1| unknown [Zea mays]
Length = 463
Score = 84.3 bits (207), Expect = 1e-14, Method: Composition-based stats.
Identities = 45/76 (59%), Positives = 54/76 (71%), Gaps = 2/76 (2%)
Query: 78 RKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGA--QLNVPEGLWLTGSFNLTS 135
R S+ DFGGVGDGTTSNT AFR AV ++ + +GG L VP G WLTG FNLTS
Sbjct: 48 RAHTASVADFGGVGDGTTSNTAAFRSAVDHLSQYSGEGGGGGMLYVPAGKWLTGPFNLTS 107
Query: 136 NFTLFLERGAVMLGSQ 151
+FTL+L + AV+LGSQ
Sbjct: 108 HFTLYLHQDAVILGSQ 123
>gi|226506670|ref|NP_001151164.1| glycoside hydrolase, family 28 precursor [Zea mays]
gi|194707808|gb|ACF87988.1| unknown [Zea mays]
gi|413942574|gb|AFW75223.1| glycoside hydrolase, family 28 [Zea mays]
Length = 486
Score = 84.3 bits (207), Expect = 1e-14, Method: Composition-based stats.
Identities = 45/76 (59%), Positives = 54/76 (71%), Gaps = 2/76 (2%)
Query: 78 RKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGA--QLNVPEGLWLTGSFNLTS 135
R S+ DFGGVGDGTTSNT AFR AV ++ + +GG L VP G WLTG FNLTS
Sbjct: 55 RAHTASVADFGGVGDGTTSNTAAFRSAVDHLSQYSGEGGGGGMLYVPAGKWLTGPFNLTS 114
Query: 136 NFTLFLERGAVMLGSQ 151
+FTL+L + AV+LGSQ
Sbjct: 115 HFTLYLHQDAVILGSQ 130
>gi|413942575|gb|AFW75224.1| glycoside hydrolase, family 28 [Zea mays]
Length = 506
Score = 84.3 bits (207), Expect = 1e-14, Method: Composition-based stats.
Identities = 45/76 (59%), Positives = 54/76 (71%), Gaps = 2/76 (2%)
Query: 78 RKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGA--QLNVPEGLWLTGSFNLTS 135
R S+ DFGGVGDGTTSNT AFR AV ++ + +GG L VP G WLTG FNLTS
Sbjct: 75 RAHTASVADFGGVGDGTTSNTAAFRSAVDHLSQYSGEGGGGGMLYVPAGKWLTGPFNLTS 134
Query: 136 NFTLFLERGAVMLGSQ 151
+FTL+L + AV+LGSQ
Sbjct: 135 HFTLYLHQDAVILGSQ 150
>gi|255537765|ref|XP_002509949.1| Polygalacturonase precursor, putative [Ricinus communis]
gi|223549848|gb|EEF51336.1| Polygalacturonase precursor, putative [Ricinus communis]
Length = 446
Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/74 (55%), Positives = 53/74 (71%)
Query: 78 RKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNF 137
R +SI DFGGVGDG T NT+AFR A+ +Q +GG L +P G++LTGSFNLTS+
Sbjct: 38 RNDKISIADFGGVGDGKTVNTKAFRAAIYRIQHLKRRGGTLLYIPPGVFLTGSFNLTSHM 97
Query: 138 TLFLERGAVMLGSQ 151
TL+L RGAV+ +Q
Sbjct: 98 TLYLARGAVIKATQ 111
>gi|302823943|ref|XP_002993619.1| hypothetical protein SELMODRAFT_137353 [Selaginella moellendorffii]
gi|300138547|gb|EFJ05311.1| hypothetical protein SELMODRAFT_137353 [Selaginella moellendorffii]
Length = 468
Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/75 (56%), Positives = 51/75 (68%), Gaps = 1/75 (1%)
Query: 78 RKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDK-GGAQLNVPEGLWLTGSFNLTSN 136
R V ++ DFGG+GDG T NT AF +AV + K GGAQLNVP G+WLT FNLTS+
Sbjct: 47 RPVVFNLTDFGGIGDGRTINTRAFERAVAEISSAAAKSGGAQLNVPAGVWLTAPFNLTSH 106
Query: 137 FTLFLERGAVMLGSQ 151
TLFLE A +L +Q
Sbjct: 107 MTLFLEEDATILATQ 121
>gi|343172553|gb|AEL98980.1| putative polygalacturonase, partial [Silene latifolia]
gi|343172555|gb|AEL98981.1| putative polygalacturonase, partial [Silene latifolia]
Length = 431
Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/74 (55%), Positives = 52/74 (70%)
Query: 78 RKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNF 137
RK + I +FG GDG T NT+AF+ AV ++ GGAQL VP G WLTGSF+L S+F
Sbjct: 7 RKHSAFITEFGAKGDGKTLNTKAFKTAVNFLSRLTHDGGAQLVVPPGRWLTGSFSLISHF 66
Query: 138 TLFLERGAVMLGSQ 151
TL+L +GAV+L SQ
Sbjct: 67 TLYLHQGAVLLASQ 80
>gi|302783324|ref|XP_002973435.1| hypothetical protein SELMODRAFT_99190 [Selaginella moellendorffii]
gi|300159188|gb|EFJ25809.1| hypothetical protein SELMODRAFT_99190 [Selaginella moellendorffii]
Length = 468
Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/75 (56%), Positives = 51/75 (68%), Gaps = 1/75 (1%)
Query: 78 RKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDK-GGAQLNVPEGLWLTGSFNLTSN 136
R V ++ DFGG+GDG T NT AF +AV + K GGAQLNVP G+WLT FNLTS+
Sbjct: 47 RPVVFNLTDFGGIGDGRTINTRAFERAVAEISSAAAKSGGAQLNVPAGVWLTAPFNLTSH 106
Query: 137 FTLFLERGAVMLGSQ 151
TLFLE A +L +Q
Sbjct: 107 MTLFLEEDATILATQ 121
>gi|115465733|ref|NP_001056466.1| Os05g0587000 [Oryza sativa Japonica Group]
gi|113580017|dbj|BAF18380.1| Os05g0587000 [Oryza sativa Japonica Group]
gi|125568884|gb|EAZ10399.1| hypothetical protein OsJ_00232 [Oryza sativa Japonica Group]
Length = 448
Score = 83.6 bits (205), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 42/77 (54%), Positives = 52/77 (67%)
Query: 75 LPERKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLT 134
+P R MS+ FGGVGDG NT AF +AV ++ +GGA L VP G+WLTG FNLT
Sbjct: 41 VPPRGAWMSVASFGGVGDGRALNTAAFARAVARIERRRARGGALLYVPAGVWLTGPFNLT 100
Query: 135 SNFTLFLERGAVMLGSQ 151
S+ TLFL RGAV+ +Q
Sbjct: 101 SHMTLFLARGAVIRATQ 117
>gi|357452825|ref|XP_003596689.1| Exo-poly-alpha-D-galacturonosidase [Medicago truncatula]
gi|355485737|gb|AES66940.1| Exo-poly-alpha-D-galacturonosidase [Medicago truncatula]
Length = 238
Score = 83.6 bits (205), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 39/73 (53%), Positives = 54/73 (73%)
Query: 78 RKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNF 137
R ++SI +FG VGD T NT+AF+ A+ Y++ + DKGGA+L VP G W TGSF+L S+
Sbjct: 38 RPHSVSITEFGAVGDWITLNTKAFQNAIFYLKLYADKGGAKLFVPAGRWFTGSFDLISHL 97
Query: 138 TLFLERGAVMLGS 150
TL L++ AV+LGS
Sbjct: 98 TLLLDKDAVILGS 110
>gi|226504332|ref|NP_001141464.1| uncharacterized protein LOC100273574 precursor [Zea mays]
gi|194704686|gb|ACF86427.1| unknown [Zea mays]
gi|223949711|gb|ACN28939.1| unknown [Zea mays]
gi|413950643|gb|AFW83292.1| hypothetical protein ZEAMMB73_881856 [Zea mays]
gi|413950644|gb|AFW83293.1| hypothetical protein ZEAMMB73_881856 [Zea mays]
Length = 446
Score = 83.2 bits (204), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 41/76 (53%), Positives = 50/76 (65%)
Query: 76 PERKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTS 135
P R +S+ FGG GDG T NT AF +AV ++ GGA+L VP G+WLTG FNLTS
Sbjct: 38 PRRGARVSVASFGGAGDGRTLNTAAFARAVASIERRAAPGGAELYVPPGVWLTGPFNLTS 97
Query: 136 NFTLFLERGAVMLGSQ 151
TLFL RGAV+ +Q
Sbjct: 98 RMTLFLARGAVIRATQ 113
>gi|48475087|gb|AAT44156.1| putative polygalacturonase [Oryza sativa Japonica Group]
Length = 474
Score = 83.2 bits (204), Expect = 3e-14, Method: Composition-based stats.
Identities = 42/77 (54%), Positives = 52/77 (67%)
Query: 75 LPERKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLT 134
+P R MS+ FGGVGDG NT AF +AV ++ +GGA L VP G+WLTG FNLT
Sbjct: 41 VPPRGAWMSVASFGGVGDGRALNTAAFARAVARIERRRARGGALLYVPAGVWLTGPFNLT 100
Query: 135 SNFTLFLERGAVMLGSQ 151
S+ TLFL RGAV+ +Q
Sbjct: 101 SHMTLFLARGAVIRATQ 117
>gi|226492991|ref|NP_001140630.1| uncharacterized protein LOC100272705 [Zea mays]
gi|194700250|gb|ACF84209.1| unknown [Zea mays]
gi|413924334|gb|AFW64266.1| hypothetical protein ZEAMMB73_686606 [Zea mays]
Length = 495
Score = 83.2 bits (204), Expect = 3e-14, Method: Composition-based stats.
Identities = 39/69 (56%), Positives = 46/69 (66%)
Query: 81 AMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLF 140
A +I DFG VGDG NT AF +AV + ++GG QLNVP G WLT FNLTS+ TLF
Sbjct: 76 AYNITDFGAVGDGRAVNTAAFERAVEAIAALAERGGGQLNVPPGRWLTAPFNLTSHMTLF 135
Query: 141 LERGAVMLG 149
L GA +LG
Sbjct: 136 LAEGAEILG 144
>gi|242053639|ref|XP_002455965.1| hypothetical protein SORBIDRAFT_03g028140 [Sorghum bicolor]
gi|241927940|gb|EES01085.1| hypothetical protein SORBIDRAFT_03g028140 [Sorghum bicolor]
Length = 447
Score = 82.8 bits (203), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 41/76 (53%), Positives = 50/76 (65%)
Query: 76 PERKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTS 135
P R +S+ FGG GDG T NT AF +AV ++ GGA+L VP G+WLTG FNLTS
Sbjct: 39 PRRGARVSVASFGGAGDGRTLNTAAFARAVATIERRAVPGGAELYVPPGVWLTGPFNLTS 98
Query: 136 NFTLFLERGAVMLGSQ 151
TLFL RGAV+ +Q
Sbjct: 99 RMTLFLARGAVVRATQ 114
>gi|15229188|ref|NP_189881.1| Pectin lyase-like protein [Arabidopsis thaliana]
gi|7529266|emb|CAB86682.1| polygalacturonase-like protein [Arabidopsis thaliana]
gi|15215709|gb|AAK91400.1| AT3g42950/F18P9_110 [Arabidopsis thaliana]
gi|332644239|gb|AEE77760.1| Pectin lyase-like protein [Arabidopsis thaliana]
Length = 484
Score = 82.8 bits (203), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 41/74 (55%), Positives = 46/74 (62%)
Query: 78 RKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNF 137
R V ++ DFG VGDG T NTEAF KA+ + KGG QLNVP G WLT FNLTS
Sbjct: 62 RPVVFNLTDFGAVGDGVTINTEAFEKAIYKISKLAKKGGGQLNVPPGRWLTAPFNLTSYM 121
Query: 138 TLFLERGAVMLGSQ 151
TLFL A +L Q
Sbjct: 122 TLFLSENAEILALQ 135
>gi|23506093|gb|AAN28906.1| At3g42950/F18P9_110 [Arabidopsis thaliana]
Length = 484
Score = 82.8 bits (203), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 41/74 (55%), Positives = 46/74 (62%)
Query: 78 RKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNF 137
R V ++ DFG VGDG T NTEAF KA+ + KGG QLNVP G WLT FNLTS
Sbjct: 62 RPVVFNLTDFGAVGDGVTINTEAFEKAIYKISKLAKKGGGQLNVPPGRWLTAPFNLTSYM 121
Query: 138 TLFLERGAVMLGSQ 151
TLFL A +L Q
Sbjct: 122 TLFLSENAEILALQ 135
>gi|224075086|ref|XP_002304552.1| predicted protein [Populus trichocarpa]
gi|222841984|gb|EEE79531.1| predicted protein [Populus trichocarpa]
Length = 412
Score = 82.4 bits (202), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 41/74 (55%), Positives = 53/74 (71%)
Query: 78 RKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNF 137
R +SI DFGGVGDG T NT+AFR+AV +Q +GG L +P G++LT SFNLTS+
Sbjct: 4 RNDKISIADFGGVGDGKTLNTKAFREAVYRIQHLRRRGGTLLYIPPGVYLTESFNLTSHM 63
Query: 138 TLFLERGAVMLGSQ 151
TL+L RGAV+ +Q
Sbjct: 64 TLYLARGAVIKATQ 77
>gi|126009432|gb|ABM30197.2| polygalacturonase [Brassica juncea]
Length = 278
Score = 82.4 bits (202), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 41/74 (55%), Positives = 47/74 (63%)
Query: 78 RKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNF 137
R V+ ++ DFG VGDG T NTEAF +AV + KGG QLNVP G WLT FNLTS
Sbjct: 79 RPVSFNLTDFGAVGDGVTVNTEAFERAVYAISKLSKKGGGQLNVPPGRWLTAPFNLTSFM 138
Query: 138 TLFLERGAVMLGSQ 151
TLFL A +L Q
Sbjct: 139 TLFLAEDAEILAVQ 152
>gi|125553514|gb|EAY99223.1| hypothetical protein OsI_21181 [Oryza sativa Indica Group]
Length = 448
Score = 82.0 bits (201), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 41/77 (53%), Positives = 52/77 (67%)
Query: 75 LPERKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLT 134
+P R +S+ FGGVGDG NT AF +AV ++ +GGA L VP G+WLTG FNLT
Sbjct: 41 VPRRGAWISVASFGGVGDGRALNTAAFARAVARIERRRARGGALLYVPAGVWLTGPFNLT 100
Query: 135 SNFTLFLERGAVMLGSQ 151
S+ TLFL RGAV+ +Q
Sbjct: 101 SHMTLFLARGAVIRATQ 117
>gi|297818750|ref|XP_002877258.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
gi|297323096|gb|EFH53517.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
Length = 487
Score = 82.0 bits (201), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 40/74 (54%), Positives = 46/74 (62%)
Query: 78 RKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNF 137
R V ++ DFG VGDG T NTEAF +A+ + KGG QLNVP G WLT FNLTS
Sbjct: 65 RPVVFNLTDFGAVGDGVTVNTEAFERAIYKISKLATKGGGQLNVPPGRWLTAPFNLTSYM 124
Query: 138 TLFLERGAVMLGSQ 151
TLFL A +L Q
Sbjct: 125 TLFLAENAEILALQ 138
>gi|326490848|dbj|BAJ90091.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 488
Score = 82.0 bits (201), Expect = 8e-14, Method: Composition-based stats.
Identities = 44/76 (57%), Positives = 53/76 (69%), Gaps = 2/76 (2%)
Query: 78 RKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGA--QLNVPEGLWLTGSFNLTS 135
R+ S+ DFGGVGDG TSNT AFRKAV ++ + +GG L VP G WLT FNLTS
Sbjct: 44 REHTASLTDFGGVGDGNTSNTAAFRKAVEHLSQYSGEGGGGGMLYVPAGRWLTAPFNLTS 103
Query: 136 NFTLFLERGAVMLGSQ 151
+FTLFL AV+LG+Q
Sbjct: 104 HFTLFLHADAVILGTQ 119
>gi|357114278|ref|XP_003558927.1| PREDICTED: probable polygalacturonase-like [Brachypodium
distachyon]
Length = 462
Score = 82.0 bits (201), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 44/75 (58%), Positives = 51/75 (68%), Gaps = 1/75 (1%)
Query: 78 RKVAMSIKDFGGVGDGTTSNTEAFRKAVRYM-QGFGDKGGAQLNVPEGLWLTGSFNLTSN 136
RK I ++G VGDG T NT AF +AV + + D GGA L VPEG WLTG FNLTS+
Sbjct: 39 RKHVKRITEYGAVGDGKTLNTAAFARAVADLSRRAADGGGAALVVPEGKWLTGPFNLTSH 98
Query: 137 FTLFLERGAVMLGSQ 151
FTLFL RGA +L SQ
Sbjct: 99 FTLFLHRGAEILASQ 113
>gi|81074755|gb|ABB55373.1| polygalacturonase-like protein-like [Solanum tuberosum]
Length = 479
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/80 (48%), Positives = 54/80 (67%), Gaps = 1/80 (1%)
Query: 72 DQYLPERKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSF 131
+++L R ++S+ DFG VG G T N AF+ A+ Y++ F DKGGAQ NVP G WLT S
Sbjct: 59 NKHLKPRPHSVSVLDFGAVGHGKTINNVAFQNAIFYLKSFADKGGAQFNVPAGKWLTRSI 118
Query: 132 NLTSNFTLFLERGAVMLGSQ 151
N T +T+ LE+ AV+L S+
Sbjct: 119 NFTCTYTV-LEKDAVILASE 137
>gi|15236625|ref|NP_194113.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
gi|4454051|emb|CAA23048.1| putative polygalacturonase [Arabidopsis thaliana]
gi|7269231|emb|CAB81300.1| putative polygalacturonase [Arabidopsis thaliana]
gi|17065242|gb|AAL32775.1| putative polygalacturonase [Arabidopsis thaliana]
gi|22136230|gb|AAM91193.1| putative polygalacturonase [Arabidopsis thaliana]
gi|332659410|gb|AEE84810.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
Length = 444
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 42/91 (46%), Positives = 60/91 (65%), Gaps = 3/91 (3%)
Query: 61 DPDSCAAGLLGDQYLPERKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLN 120
D ++ +G++ +Y R +SI DFGGVGDG T NT+AFR A+ +Q +GG L
Sbjct: 23 DSEATCSGIVPLRY---RYDKISITDFGGVGDGRTVNTKAFRAAIYRIQHLKRRGGTLLY 79
Query: 121 VPEGLWLTGSFNLTSNFTLFLERGAVMLGSQ 151
+P G++LT SFNLTS+ TL+L +GAV+ Q
Sbjct: 80 IPPGVYLTESFNLTSHMTLYLAKGAVIRAVQ 110
>gi|356524183|ref|XP_003530711.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 474
Score = 80.9 bits (198), Expect = 1e-13, Method: Composition-based stats.
Identities = 44/95 (46%), Positives = 62/95 (65%), Gaps = 4/95 (4%)
Query: 57 GAIFDPDSCAAGLLGDQYLPERKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGG 116
AI+ +C+ ++ +Y +R +S+ DFGGVGDG T NT+AFR AV +Q +GG
Sbjct: 52 AAIYSTTTCS-NIVSLRYRSDR---ISVTDFGGVGDGRTLNTKAFRAAVYRIQHLRRRGG 107
Query: 117 AQLNVPEGLWLTGSFNLTSNFTLFLERGAVMLGSQ 151
L VP G++LT SFNLTS+ TL+L GAV+ +Q
Sbjct: 108 TVLYVPPGVYLTESFNLTSHMTLYLAAGAVIKATQ 142
>gi|297844882|ref|XP_002890322.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
gi|297336164|gb|EFH66581.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
Length = 506
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/81 (54%), Positives = 52/81 (64%), Gaps = 2/81 (2%)
Query: 73 QYLPE-RKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFG-DKGGAQLNVPEGLWLTGS 130
Q LP R V +KDFGGVGDG T NTEAF +AV + + GG QLNVP G WLT
Sbjct: 77 QPLPRLRPVVFDLKDFGGVGDGVTLNTEAFERAVISISKLERNSGGGQLNVPPGRWLTAP 136
Query: 131 FNLTSNFTLFLERGAVMLGSQ 151
FNLTS+ TLFL + +LG +
Sbjct: 137 FNLTSHMTLFLAEDSEILGVE 157
>gi|356567484|ref|XP_003551949.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 442
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/94 (47%), Positives = 62/94 (65%), Gaps = 4/94 (4%)
Query: 58 AIFDPDSCAAGLLGDQYLPERKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGA 117
AI+ +C+ ++ +Y +R +SI DFGGVGDG T NT+AFR AV +Q +GG
Sbjct: 21 AIYSAATCS-NIVPLRYRSDR---ISITDFGGVGDGRTLNTKAFRAAVYRIQHLRRRGGT 76
Query: 118 QLNVPEGLWLTGSFNLTSNFTLFLERGAVMLGSQ 151
L VP G++LT SFNLTS+ TL+L GAV+ +Q
Sbjct: 77 VLYVPPGVYLTESFNLTSHMTLYLAAGAVIKATQ 110
>gi|357118995|ref|XP_003561232.1| PREDICTED: probable polygalacturonase-like [Brachypodium
distachyon]
Length = 512
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 43/76 (56%), Positives = 51/76 (67%), Gaps = 2/76 (2%)
Query: 78 RKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGA--QLNVPEGLWLTGSFNLTS 135
R+ S+ +FGGVGDGTTSNT AFR AV ++ + GG L VP G WLT FNLTS
Sbjct: 69 REHTASLAEFGGVGDGTTSNTAAFRAAVEHLSQYSGDGGGGGMLYVPAGRWLTAPFNLTS 128
Query: 136 NFTLFLERGAVMLGSQ 151
+FTLFL AV+L SQ
Sbjct: 129 HFTLFLHSDAVILASQ 144
>gi|297742322|emb|CBI34471.3| unnamed protein product [Vitis vinifera]
Length = 447
Score = 79.3 bits (194), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 38/75 (50%), Positives = 52/75 (69%)
Query: 77 ERKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSN 136
R +SIKDFGGVGDG T NT+AFR A+ ++ +GG L +P G++LT SFNLTS+
Sbjct: 38 HRNDVISIKDFGGVGDGKTLNTKAFRAAIYRIEHLRRRGGTLLYIPPGVYLTESFNLTSH 97
Query: 137 FTLFLERGAVMLGSQ 151
TL+L + AV+ +Q
Sbjct: 98 MTLYLSKDAVIRATQ 112
>gi|297799608|ref|XP_002867688.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
gi|297313524|gb|EFH43947.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
Length = 444
Score = 79.0 bits (193), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 40/91 (43%), Positives = 59/91 (64%), Gaps = 3/91 (3%)
Query: 61 DPDSCAAGLLGDQYLPERKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLN 120
D ++ +G++ +Y R +SI D+GGVGDG T NT+AFR A+ +Q +GG L
Sbjct: 23 DSEATCSGIVPLRY---RYDKISITDYGGVGDGRTVNTKAFRAAIYRIQHLKRRGGTLLY 79
Query: 121 VPEGLWLTGSFNLTSNFTLFLERGAVMLGSQ 151
+P G++LT SFNLTS+ T +L +GAV+ Q
Sbjct: 80 IPPGVYLTESFNLTSHMTFYLAKGAVIRAVQ 110
>gi|242091535|ref|XP_002441600.1| hypothetical protein SORBIDRAFT_09g030140 [Sorghum bicolor]
gi|241946885|gb|EES20030.1| hypothetical protein SORBIDRAFT_09g030140 [Sorghum bicolor]
Length = 439
Score = 79.0 bits (193), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 46/90 (51%), Positives = 55/90 (61%), Gaps = 6/90 (6%)
Query: 63 DSCAAGLLGDQYLPERKVAMSIKDFGGVGDGTTSNTEAFRKAV-RYMQGFGDKGGAQLNV 121
DSC +G P R MS+ FG GDG T NT AF +AV R + G +GG L V
Sbjct: 24 DSCWSGPA-----PLRGAWMSVASFGARGDGQTLNTGAFARAVARIERRRGARGGTLLYV 78
Query: 122 PEGLWLTGSFNLTSNFTLFLERGAVMLGSQ 151
P G+WLTG FNLTS+ TLFL RGAV+ +Q
Sbjct: 79 PPGVWLTGPFNLTSHMTLFLARGAVIRATQ 108
>gi|449452247|ref|XP_004143871.1| PREDICTED: probable polygalacturonase-like [Cucumis sativus]
gi|449501789|ref|XP_004161459.1| PREDICTED: probable polygalacturonase-like [Cucumis sativus]
Length = 445
Score = 78.6 bits (192), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 42/94 (44%), Positives = 61/94 (64%), Gaps = 4/94 (4%)
Query: 58 AIFDPDSCAAGLLGDQYLPERKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGA 117
A+ D +C+ G++ +Y R +SI DFGG+GDG T NT AFR A+ +Q +GG
Sbjct: 21 AVADLTTCS-GIVPMKY---RNDKISIADFGGIGDGRTLNTRAFRAAIYRIQHLRRRGGT 76
Query: 118 QLNVPEGLWLTGSFNLTSNFTLFLERGAVMLGSQ 151
L +P G++LT +FNLTS+ TL+L +GAV+ Q
Sbjct: 77 LLYIPPGVYLTETFNLTSHMTLYLAKGAVIKAVQ 110
>gi|255645539|gb|ACU23264.1| unknown [Glycine max]
Length = 126
Score = 78.6 bits (192), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 39/77 (50%), Positives = 53/77 (68%)
Query: 75 LPERKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLT 134
L R +SI +FGGVGDG T NT+AFR+A+ +Q +GG L VP G++LT FNLT
Sbjct: 36 LGHRTDNISITEFGGVGDGRTLNTKAFREAIYRVQHLPREGGTLLYVPPGVYLTEPFNLT 95
Query: 135 SNFTLFLERGAVMLGSQ 151
S+ TL+L GAV++ +Q
Sbjct: 96 SHMTLYLAAGAVIMATQ 112
>gi|186701223|gb|ACC91250.1| glycoside hydrolase family 28 protein [Arabidopsis halleri]
Length = 444
Score = 78.6 bits (192), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 40/91 (43%), Positives = 60/91 (65%), Gaps = 3/91 (3%)
Query: 61 DPDSCAAGLLGDQYLPERKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLN 120
D ++ +G++ +Y R +SI ++GGVGDG T NT+AFR A+ +Q +GG L
Sbjct: 23 DSEATCSGIVPLRY---RYDKISITEYGGVGDGRTVNTKAFRAAIYRIQHLKRRGGTLLY 79
Query: 121 VPEGLWLTGSFNLTSNFTLFLERGAVMLGSQ 151
+P G++LT SFNLTS+ TL+L +GAV+ Q
Sbjct: 80 IPPGVYLTESFNLTSHMTLYLAKGAVIRAVQ 110
>gi|356554060|ref|XP_003545367.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 446
Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/77 (50%), Positives = 53/77 (68%)
Query: 75 LPERKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLT 134
L R +SI +FGGVGDG T NT+AFR+A+ +Q +GG L VP G++LT FNLT
Sbjct: 36 LGHRTDNISITEFGGVGDGRTLNTKAFREAIYRVQHLPREGGTLLYVPPGVYLTEPFNLT 95
Query: 135 SNFTLFLERGAVMLGSQ 151
S+ TL+L GAV++ +Q
Sbjct: 96 SHMTLYLAAGAVIMATQ 112
>gi|242042413|ref|XP_002468601.1| hypothetical protein SORBIDRAFT_01g048880 [Sorghum bicolor]
gi|241922455|gb|EER95599.1| hypothetical protein SORBIDRAFT_01g048880 [Sorghum bicolor]
Length = 463
Score = 77.0 bits (188), Expect = 2e-12, Method: Composition-based stats.
Identities = 40/74 (54%), Positives = 47/74 (63%)
Query: 78 RKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNF 137
RK + ++G VGDG T NT AF KAV + GGA L VP G WLTG FNLTS F
Sbjct: 41 RKHVAKVTEYGAVGDGRTLNTGAFAKAVADLSHRARDGGAALVVPPGKWLTGPFNLTSCF 100
Query: 138 TLFLERGAVMLGSQ 151
TL+L+ GA +L SQ
Sbjct: 101 TLYLDEGAEILASQ 114
>gi|357139199|ref|XP_003571172.1| PREDICTED: probable polygalacturonase-like [Brachypodium
distachyon]
Length = 266
Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 44/86 (51%), Positives = 55/86 (63%), Gaps = 8/86 (9%)
Query: 66 AAGLLGDQYLPERKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGL 125
AG + ++ PE +SI +FGGVGDG T NT A RKAV +Q G L +P G
Sbjct: 90 CAGAVPERPRPE---VVSITEFGGVGDGRTLNTWALRKAVYRIQC-----GTTLLLPVGT 141
Query: 126 WLTGSFNLTSNFTLFLERGAVMLGSQ 151
WL+GSFNLTS+ TLFL RGAV+ +Q
Sbjct: 142 WLSGSFNLTSHMTLFLARGAVLKATQ 167
>gi|226508288|ref|NP_001151102.1| glycoside hydrolase, family 28 precursor [Zea mays]
gi|195644332|gb|ACG41634.1| glycoside hydrolase, family 28 [Zea mays]
gi|219886803|gb|ACL53776.1| unknown [Zea mays]
gi|414864493|tpg|DAA43050.1| TPA: glycoside hydrolase, family 28 [Zea mays]
Length = 463
Score = 75.9 bits (185), Expect = 5e-12, Method: Composition-based stats.
Identities = 39/74 (52%), Positives = 47/74 (63%)
Query: 78 RKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNF 137
RK + ++G VGDG T NT AF +AV + GGA L VP G WLTG FNLTS F
Sbjct: 41 RKHVARVTEYGAVGDGRTLNTAAFARAVADLARRAPDGGAALVVPPGKWLTGPFNLTSCF 100
Query: 138 TLFLERGAVMLGSQ 151
TL+L+ GA +L SQ
Sbjct: 101 TLYLDEGAEILASQ 114
>gi|414864495|tpg|DAA43052.1| TPA: hypothetical protein ZEAMMB73_419161 [Zea mays]
Length = 216
Score = 75.9 bits (185), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 39/74 (52%), Positives = 47/74 (63%)
Query: 78 RKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNF 137
RK + ++G VGDG T NT AF +AV + GGA L VP G WLTG FNLTS F
Sbjct: 41 RKHVARVTEYGAVGDGRTLNTAAFARAVADLARRAPDGGAALVVPPGKWLTGPFNLTSCF 100
Query: 138 TLFLERGAVMLGSQ 151
TL+L+ GA +L SQ
Sbjct: 101 TLYLDEGAEILASQ 114
>gi|414864494|tpg|DAA43051.1| TPA: hypothetical protein ZEAMMB73_419161 [Zea mays]
Length = 220
Score = 75.5 bits (184), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 39/74 (52%), Positives = 47/74 (63%)
Query: 78 RKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNF 137
RK + ++G VGDG T NT AF +AV + GGA L VP G WLTG FNLTS F
Sbjct: 41 RKHVARVTEYGAVGDGRTLNTAAFARAVADLARRAPDGGAALVVPPGKWLTGPFNLTSCF 100
Query: 138 TLFLERGAVMLGSQ 151
TL+L+ GA +L SQ
Sbjct: 101 TLYLDEGAEILASQ 114
>gi|414864492|tpg|DAA43049.1| TPA: hypothetical protein ZEAMMB73_419161 [Zea mays]
Length = 205
Score = 75.5 bits (184), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 39/74 (52%), Positives = 47/74 (63%)
Query: 78 RKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNF 137
RK + ++G VGDG T NT AF +AV + GGA L VP G WLTG FNLTS F
Sbjct: 41 RKHVARVTEYGAVGDGRTLNTAAFARAVADLARRAPDGGAALVVPPGKWLTGPFNLTSCF 100
Query: 138 TLFLERGAVMLGSQ 151
TL+L+ GA +L SQ
Sbjct: 101 TLYLDEGAEILASQ 114
>gi|115479361|ref|NP_001063274.1| Os09g0439400 [Oryza sativa Japonica Group]
gi|51091349|dbj|BAD36084.1| putative polygalacturonase [Oryza sativa Japonica Group]
gi|51091399|dbj|BAD36142.1| putative polygalacturonase [Oryza sativa Japonica Group]
gi|113631507|dbj|BAF25188.1| Os09g0439400 [Oryza sativa Japonica Group]
gi|215768243|dbj|BAH00472.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 526
Score = 74.3 bits (181), Expect = 2e-11, Method: Composition-based stats.
Identities = 38/68 (55%), Positives = 45/68 (66%), Gaps = 3/68 (4%)
Query: 84 IKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFLER 143
+++FGGVGDG T NTEAF AV ++GG +L VP G WLT FNLTS TLFL
Sbjct: 113 LREFGGVGDGRTLNTEAFVAAV---ASIAERGGGRLVVPAGRWLTAPFNLTSRMTLFLAA 169
Query: 144 GAVMLGSQ 151
GA +LG Q
Sbjct: 170 GAEILGVQ 177
>gi|8954055|gb|AAF82228.1|AC069143_4 Contains similarity to a polygalacturonase-like protein gi|7529266
from Arabidopsis thaliana BAC F18P9 gb|AL138654 and
contains multiple polygalacturonase (pectinase) PF|00295
domains [Arabidopsis thaliana]
Length = 533
Score = 73.9 bits (180), Expect = 2e-11, Method: Composition-based stats.
Identities = 43/81 (53%), Positives = 51/81 (62%), Gaps = 2/81 (2%)
Query: 73 QYLPE-RKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGA-QLNVPEGLWLTGS 130
Q +P R V +KDFGGVGDG T NTEAF +AV + G G QLNVP G WLT
Sbjct: 77 QPIPRLRPVVFDLKDFGGVGDGFTLNTEAFERAVISISKLGGSSGGGQLNVPPGRWLTAP 136
Query: 131 FNLTSNFTLFLERGAVMLGSQ 151
FNLTS+ TLFL + +LG +
Sbjct: 137 FNLTSHMTLFLAEDSEILGVE 157
>gi|359487180|ref|XP_002268806.2| PREDICTED: putative disease resistance RPP13-like protein 1-like
[Vitis vinifera]
Length = 1629
Score = 73.6 bits (179), Expect = 2e-11, Method: Composition-based stats.
Identities = 33/68 (48%), Positives = 46/68 (67%)
Query: 84 IKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFLER 143
+ +FGG GDG +AF+ A+ ++ GGA+ VP G WLTGSFNLTS+FTL++ +
Sbjct: 1539 LTNFGGNGDGKKMKIKAFKSAIDHLSECASDGGAEPIVPPGKWLTGSFNLTSHFTLYVHK 1598
Query: 144 GAVMLGSQ 151
AV+LG Q
Sbjct: 1599 DAVILGGQ 1606
>gi|414885630|tpg|DAA61644.1| TPA: hypothetical protein ZEAMMB73_326074 [Zea mays]
Length = 516
Score = 73.2 bits (178), Expect = 3e-11, Method: Composition-based stats.
Identities = 39/88 (44%), Positives = 50/88 (56%), Gaps = 14/88 (15%)
Query: 75 LPERKVA-----------MSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPE 123
+P+R VA +++FG VGDG T NT AF A+ ++GG +L VP
Sbjct: 83 MPKRAVASLGHWAASPPVYDLREFGAVGDGRTVNTAAFESAI---AAIAERGGGRLTVPA 139
Query: 124 GLWLTGSFNLTSNFTLFLERGAVMLGSQ 151
G WLT FNLTS+ TLFL GA +LG Q
Sbjct: 140 GRWLTAPFNLTSHMTLFLAAGAEILGIQ 167
>gi|15221958|ref|NP_173351.1| Pectin lyase-like protein [Arabidopsis thaliana]
gi|332191692|gb|AEE29813.1| Pectin lyase-like protein [Arabidopsis thaliana]
Length = 506
Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/81 (53%), Positives = 51/81 (62%), Gaps = 2/81 (2%)
Query: 73 QYLPE-RKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGA-QLNVPEGLWLTGS 130
Q +P R V +KDFGGVGDG T NTEAF +AV + G G QLNVP G WLT
Sbjct: 77 QPIPRLRPVVFDLKDFGGVGDGFTLNTEAFERAVISISKLGGSSGGGQLNVPPGRWLTAP 136
Query: 131 FNLTSNFTLFLERGAVMLGSQ 151
FNLTS+ TLFL + +LG +
Sbjct: 137 FNLTSHMTLFLAEDSEILGVE 157
>gi|218202213|gb|EEC84640.1| hypothetical protein OsI_31518 [Oryza sativa Indica Group]
Length = 526
Score = 73.2 bits (178), Expect = 4e-11, Method: Composition-based stats.
Identities = 37/68 (54%), Positives = 45/68 (66%), Gaps = 3/68 (4%)
Query: 84 IKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFLER 143
+++FGGVGDG T NTEAF AV ++GG +L VP G WLT FNLT+ TLFL
Sbjct: 113 LREFGGVGDGRTLNTEAFVAAV---ASIAERGGGRLVVPAGRWLTAPFNLTNRMTLFLAA 169
Query: 144 GAVMLGSQ 151
GA +LG Q
Sbjct: 170 GAEILGVQ 177
>gi|242044796|ref|XP_002460269.1| hypothetical protein SORBIDRAFT_02g025730 [Sorghum bicolor]
gi|241923646|gb|EER96790.1| hypothetical protein SORBIDRAFT_02g025730 [Sorghum bicolor]
Length = 518
Score = 72.8 bits (177), Expect = 4e-11, Method: Composition-based stats.
Identities = 40/90 (44%), Positives = 51/90 (56%), Gaps = 4/90 (4%)
Query: 62 PDSCAAGLLGDQYLPERKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNV 121
P AA L Q++ V +++FG VGDG T NT AF A+ ++GG +L V
Sbjct: 84 PKRAAASLSLGQWVASPPV-YDLREFGAVGDGRTVNTAAFESAI---AAIAERGGGRLTV 139
Query: 122 PEGLWLTGSFNLTSNFTLFLERGAVMLGSQ 151
P G WLT FNLTS+ LFL GA +LG Q
Sbjct: 140 PAGRWLTAPFNLTSHMILFLAAGAEILGIQ 169
>gi|222641659|gb|EEE69791.1| hypothetical protein OsJ_29512 [Oryza sativa Japonica Group]
Length = 426
Score = 72.4 bits (176), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 38/68 (55%), Positives = 45/68 (66%), Gaps = 3/68 (4%)
Query: 84 IKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFLER 143
+++FGGVGDG T NTEAF AV ++GG +L VP G WLT FNLTS TLFL
Sbjct: 13 LREFGGVGDGRTLNTEAFVAAV---ASIAERGGGRLVVPAGRWLTAPFNLTSRMTLFLAA 69
Query: 144 GAVMLGSQ 151
GA +LG Q
Sbjct: 70 GAEILGVQ 77
>gi|413936447|gb|AFW70998.1| hypothetical protein ZEAMMB73_666969 [Zea mays]
Length = 343
Score = 72.0 bits (175), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 44/79 (55%), Positives = 52/79 (65%), Gaps = 3/79 (3%)
Query: 63 DSCAAGLLGDQYLPERKVAMSIKDFGGVGDGTTSNTEAFRKAV-RYMQGFGDKGGAQLNV 121
DSCA G P R+V S+++FG VGDG T NT AFR+AV + GGA+L+V
Sbjct: 32 DSCAKFYAGAG--PAREVWASVEEFGAVGDGATPNTAAFRRAVVQLGARATGGGGARLDV 89
Query: 122 PEGLWLTGSFNLTSNFTLF 140
P G WLTGSFNLTS FTLF
Sbjct: 90 PPGRWLTGSFNLTSRFTLF 108
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 18/23 (78%), Positives = 20/23 (86%)
Query: 115 GGAQLNVPEGLWLTGSFNLTSNF 137
GGA+L+VP G WLTGSFNLTS F
Sbjct: 301 GGARLDVPPGRWLTGSFNLTSRF 323
>gi|357494037|ref|XP_003617307.1| Glycoside hydrolase family 28 protein [Medicago truncatula]
gi|355518642|gb|AET00266.1| Glycoside hydrolase family 28 protein [Medicago truncatula]
Length = 450
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/78 (48%), Positives = 50/78 (64%), Gaps = 1/78 (1%)
Query: 75 LPERKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDK-GGAQLNVPEGLWLTGSFNL 133
L R +S+ DFGGVGDG T NT+AFR+A+ + + GG L VP G++LT FNL
Sbjct: 37 LKYRTDNISLTDFGGVGDGHTLNTKAFREAIYRINHLSQREGGTTLYVPPGVYLTEPFNL 96
Query: 134 TSNFTLFLERGAVMLGSQ 151
TS+ TL L GAV+ +Q
Sbjct: 97 TSHMTLHLAAGAVIKATQ 114
>gi|326496364|dbj|BAJ94644.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326509249|dbj|BAJ91541.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326510305|dbj|BAJ87369.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326518514|dbj|BAJ88286.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 450
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/76 (55%), Positives = 50/76 (65%)
Query: 76 PERKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTS 135
P+R MSI FGG GDG T NT AF AV + +GGA L VP G+WLTG F+LTS
Sbjct: 42 PKRGAWMSIASFGGAGDGRTLNTAAFAAAVASIARRRARGGALLYVPPGVWLTGPFSLTS 101
Query: 136 NFTLFLERGAVMLGSQ 151
+ TLFL RGAV+ +Q
Sbjct: 102 HMTLFLARGAVIRATQ 117
>gi|340347489|ref|ZP_08670597.1| exo-poly-alpha-D-galacturonosidase [Prevotella dentalis DSM 3688]
gi|433653517|ref|YP_007297371.1| endopolygalacturonase [Prevotella dentalis DSM 3688]
gi|339609185|gb|EGQ14060.1| exo-poly-alpha-D-galacturonosidase [Prevotella dentalis DSM 3688]
gi|433304050|gb|AGB29865.1| endopolygalacturonase [Prevotella dentalis DSM 3688]
Length = 472
Score = 70.5 bits (171), Expect = 2e-10, Method: Composition-based stats.
Identities = 35/71 (49%), Positives = 45/71 (63%), Gaps = 3/71 (4%)
Query: 80 VAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTL 139
+++S+KD+G VGDG T NT AF KA M +GG LNVP G+WLTG L N L
Sbjct: 49 LSVSLKDYGAVGDGLTMNTRAFAKA---MADLAKRGGGHLNVPAGIWLTGPIVLKDNIDL 105
Query: 140 FLERGAVMLGS 150
L+R A++L S
Sbjct: 106 HLDRNALILFS 116
>gi|326488219|dbj|BAJ89948.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 450
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/76 (53%), Positives = 50/76 (65%)
Query: 76 PERKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTS 135
P+R MS+ FGG GDG T NT AF AV + +GGA L VP G+WLTG F+LTS
Sbjct: 42 PKRGAWMSVASFGGAGDGRTLNTAAFAAAVASIARRRARGGALLYVPPGVWLTGPFSLTS 101
Query: 136 NFTLFLERGAVMLGSQ 151
+ TLFL RGAV+ +Q
Sbjct: 102 HMTLFLARGAVIRATQ 117
>gi|19698861|gb|AAL91166.1| unknown protein [Arabidopsis thaliana]
gi|23197646|gb|AAN15350.1| unknown protein [Arabidopsis thaliana]
Length = 506
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/81 (51%), Positives = 50/81 (61%), Gaps = 2/81 (2%)
Query: 73 QYLPE-RKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGA-QLNVPEGLWLTGS 130
Q +P R V +KDFGGVGDG T NTEAF +AV + G G QLNVP G WLT
Sbjct: 77 QPIPRLRPVVFDLKDFGGVGDGFTLNTEAFERAVISISKLGGSSGGGQLNVPPGRWLTAP 136
Query: 131 FNLTSNFTLFLERGAVMLGSQ 151
F LTS+ TLFL + +LG +
Sbjct: 137 FYLTSHMTLFLAEDSEILGVE 157
>gi|270339777|ref|ZP_06005984.2| exo-poly-alpha-D-galacturonosidase [Prevotella bergensis DSM 17361]
gi|270333786|gb|EFA44572.1| exo-poly-alpha-D-galacturonosidase [Prevotella bergensis DSM 17361]
Length = 464
Score = 68.9 bits (167), Expect = 6e-10, Method: Composition-based stats.
Identities = 34/69 (49%), Positives = 44/69 (63%), Gaps = 3/69 (4%)
Query: 82 MSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFL 141
+++KDFG GDGT NTEAF KA+ +GG +L VP G+WLTG +L N L L
Sbjct: 48 VNLKDFGATGDGTAMNTEAFSKAI---SALNKQGGGRLVVPAGIWLTGLISLKDNIDLHL 104
Query: 142 ERGAVMLGS 150
ER AV++ S
Sbjct: 105 ERNAVIVFS 113
>gi|357135554|ref|XP_003569374.1| PREDICTED: probable polygalacturonase-like [Brachypodium
distachyon]
Length = 448
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 40/76 (52%), Positives = 49/76 (64%)
Query: 76 PERKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTS 135
P+R +S+ FGG GDG T NT AF AV ++ GG L VP G+WLTG FNLTS
Sbjct: 40 PKRGEWVSVASFGGAGDGRTLNTAAFAAAVASIERRRAPGGGLLYVPPGVWLTGPFNLTS 99
Query: 136 NFTLFLERGAVMLGSQ 151
+ TLFL RGAV+ +Q
Sbjct: 100 HMTLFLSRGAVIRATQ 115
>gi|365122251|ref|ZP_09339156.1| hypothetical protein HMPREF1033_02502 [Tannerella sp.
6_1_58FAA_CT1]
gi|363642965|gb|EHL82299.1| hypothetical protein HMPREF1033_02502 [Tannerella sp.
6_1_58FAA_CT1]
Length = 561
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 49/74 (66%), Gaps = 5/74 (6%)
Query: 75 LPERKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLT 134
P+ KV +I FGGVGDGTT N+EAF KA+ ++ KGG L +P+G+W TG L
Sbjct: 50 FPDYKV--TITQFGGVGDGTTLNSEAFAKAIEALE---KKGGGTLVIPQGIWYTGPIVLK 104
Query: 135 SNFTLFLERGAVML 148
SN ++L+ GA++L
Sbjct: 105 SNIHIYLQGGAIIL 118
>gi|168021522|ref|XP_001763290.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162685425|gb|EDQ71820.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 449
Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 44/74 (59%)
Query: 78 RKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNF 137
R ++ DFG VGDG + NT F A+ ++ GGAQL V G WLT FN+TS+
Sbjct: 33 RPHVFNLTDFGAVGDGYSVNTRCFEDAIAAIKERASDGGAQLIVGPGRWLTAPFNVTSHM 92
Query: 138 TLFLERGAVMLGSQ 151
TLFL RGA ++ Q
Sbjct: 93 TLFLSRGATIVAIQ 106
>gi|224537921|ref|ZP_03678460.1| hypothetical protein BACCELL_02810 [Bacteroides cellulosilyticus
DSM 14838]
gi|224520465|gb|EEF89570.1| hypothetical protein BACCELL_02810 [Bacteroides cellulosilyticus
DSM 14838]
Length = 964
Score = 68.6 bits (166), Expect = 8e-10, Method: Composition-based stats.
Identities = 31/67 (46%), Positives = 45/67 (67%), Gaps = 3/67 (4%)
Query: 82 MSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFL 141
+S+ ++GGVGDG T NTE FR+A+ ++ KGG L VP G+WLTG L S+ L L
Sbjct: 36 ISLTEYGGVGDGITLNTECFREAIEHLSA---KGGGTLVVPTGIWLTGPIRLKSHIELHL 92
Query: 142 ERGAVML 148
E+ A+++
Sbjct: 93 EKNALLI 99
>gi|423223572|ref|ZP_17210041.1| hypothetical protein HMPREF1062_02227 [Bacteroides cellulosilyticus
CL02T12C19]
gi|392638197|gb|EIY32044.1| hypothetical protein HMPREF1062_02227 [Bacteroides cellulosilyticus
CL02T12C19]
Length = 551
Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 50/77 (64%), Gaps = 5/77 (6%)
Query: 75 LPERKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLT 134
+P+ + ++ DFGG GDG T N+EAF KA++Y+ KGG +L VP+G+WLTG L
Sbjct: 44 IPDLNICLT--DFGGSGDGVTLNSEAFEKAIQYL---ASKGGGRLIVPQGVWLTGPIELE 98
Query: 135 SNFTLFLERGAVMLGSQ 151
+N L L ++++ SQ
Sbjct: 99 NNVELHLSDNSIVVFSQ 115
>gi|261879637|ref|ZP_06006064.1| conserved hypothetical protein [Prevotella bergensis DSM 17361]
gi|270333653|gb|EFA44439.1| conserved hypothetical protein [Prevotella bergensis DSM 17361]
Length = 496
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/73 (50%), Positives = 49/73 (67%), Gaps = 5/73 (6%)
Query: 75 LPERKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLT 134
+P+R+V ++KDFG VGDGTT TEAF KA+ + ++GG +L VP G+W TG L
Sbjct: 48 IPDRQV--NLKDFGAVGDGTTLCTEAFAKAIDKLS---EQGGGKLIVPGGVWFTGPIVLK 102
Query: 135 SNFTLFLERGAVM 147
SN L LE GAV+
Sbjct: 103 SNINLHLEVGAVI 115
>gi|333382495|ref|ZP_08474165.1| hypothetical protein HMPREF9455_02331 [Dysgonomonas gadei ATCC
BAA-286]
gi|332828806|gb|EGK01498.1| hypothetical protein HMPREF9455_02331 [Dysgonomonas gadei ATCC
BAA-286]
Length = 545
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/76 (50%), Positives = 46/76 (60%), Gaps = 5/76 (6%)
Query: 75 LPERKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLT 134
P+ KV SI DFGG+ DG T NT+AF KA M +KGG L VP G+W TG
Sbjct: 46 FPDNKV--SITDFGGIPDGITLNTDAFAKA---MDALSNKGGGTLFVPSGVWYTGPIVFK 100
Query: 135 SNFTLFLERGAVMLGS 150
SN L LE+GA++L S
Sbjct: 101 SNINLHLEKGALILFS 116
>gi|371778396|ref|ZP_09484718.1| glycoside hydrolase [Anaerophaga sp. HS1]
Length = 572
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/66 (50%), Positives = 46/66 (69%), Gaps = 3/66 (4%)
Query: 82 MSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFL 141
+SI DFG VGDG T N+EAF KA+ Y+ +KGG ++ VP G+WLTG + SN L +
Sbjct: 63 VSIVDFGAVGDGVTDNSEAFAKAIDYVS---EKGGGRVIVPRGIWLTGPIIMKSNIDLHV 119
Query: 142 ERGAVM 147
++GAV+
Sbjct: 120 QQGAVV 125
>gi|15238207|ref|NP_199002.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
gi|10177371|dbj|BAB10662.1| polygalacturonase-like protein [Arabidopsis thaliana]
gi|50897172|gb|AAT85725.1| At5g41870 [Arabidopsis thaliana]
gi|332007355|gb|AED94738.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
Length = 449
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/78 (47%), Positives = 46/78 (58%), Gaps = 1/78 (1%)
Query: 75 LPERKVAMSIKDFGGVGDGTTSNTEAFRKAV-RYMQGFGDKGGAQLNVPEGLWLTGSFNL 133
+ R +SI DFG VGDG T NT+AF A+ R G L VP G++LT SFNL
Sbjct: 38 MKHRNEMLSISDFGAVGDGKTLNTKAFNSAIDRIRNSNNSNEGTLLYVPRGVYLTQSFNL 97
Query: 134 TSNFTLFLERGAVMLGSQ 151
TS+ TL+L GAV+ Q
Sbjct: 98 TSHMTLYLADGAVIKAVQ 115
>gi|189461873|ref|ZP_03010658.1| hypothetical protein BACCOP_02539 [Bacteroides coprocola DSM 17136]
gi|189431467|gb|EDV00452.1| polygalacturonase (pectinase) [Bacteroides coprocola DSM 17136]
Length = 494
Score = 67.0 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 35/76 (46%), Positives = 46/76 (60%), Gaps = 5/76 (6%)
Query: 75 LPERKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLT 134
P+ +V ++KDFG VGDG TEAF KA+ KGG +L VP G+W TG L
Sbjct: 45 FPDNEV--NLKDFGAVGDGMHLCTEAFAKAI---DALDKKGGGKLTVPAGVWFTGPIVLK 99
Query: 135 SNFTLFLERGAVMLGS 150
SN L +E+GA++L S
Sbjct: 100 SNINLHIEKGAIVLFS 115
>gi|297801376|ref|XP_002868572.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
gi|297314408|gb|EFH44831.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
Length = 449
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/78 (47%), Positives = 46/78 (58%), Gaps = 1/78 (1%)
Query: 75 LPERKVAMSIKDFGGVGDGTTSNTEAFRKAV-RYMQGFGDKGGAQLNVPEGLWLTGSFNL 133
+ R +SI DFG VGDG T NT AF A+ R G L+VP G++LT SFNL
Sbjct: 38 MKHRTEMLSIFDFGAVGDGKTLNTNAFNTAIDRIRNSNNSSQGTLLHVPRGVYLTQSFNL 97
Query: 134 TSNFTLFLERGAVMLGSQ 151
TS+ TL+L GAV+ Q
Sbjct: 98 TSHMTLYLADGAVIKAVQ 115
>gi|300728468|ref|ZP_07061828.1| exo-poly-alpha-D-galacturonosidase [Prevotella bryantii B14]
gi|299774269|gb|EFI70901.1| exo-poly-alpha-D-galacturonosidase [Prevotella bryantii B14]
Length = 466
Score = 66.6 bits (161), Expect = 3e-09, Method: Composition-based stats.
Identities = 34/70 (48%), Positives = 45/70 (64%), Gaps = 3/70 (4%)
Query: 82 MSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFL 141
+SI D GG GDG TSNTEAFRKA+ + GG LNVP G++LTG + N L L
Sbjct: 47 VSILDCGGKGDGITSNTEAFRKAISKLSKL---GGGHLNVPAGIYLTGLISFKDNIDLHL 103
Query: 142 ERGAVMLGSQ 151
E+ A+++ S+
Sbjct: 104 EKNAIIVFSE 113
>gi|329964701|ref|ZP_08301755.1| polygalacturonase [Bacteroides fluxus YIT 12057]
gi|328525101|gb|EGF52153.1| polygalacturonase [Bacteroides fluxus YIT 12057]
Length = 506
Score = 66.6 bits (161), Expect = 3e-09, Method: Composition-based stats.
Identities = 36/76 (47%), Positives = 46/76 (60%), Gaps = 5/76 (6%)
Query: 75 LPERKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLT 134
P+R V ++KDFG VG+G TEAF A+ + G +GG L VP G+W TG L
Sbjct: 45 FPDRTV--NLKDFGAVGNGKDLCTEAFASAINTLSG---QGGGHLIVPAGVWFTGPIVLK 99
Query: 135 SNFTLFLERGAVMLGS 150
SN L LE+GAV+L S
Sbjct: 100 SNIDLHLEKGAVILFS 115
>gi|427384333|ref|ZP_18880838.1| hypothetical protein HMPREF9447_01871 [Bacteroides oleiciplenus YIT
12058]
gi|425727594|gb|EKU90453.1| hypothetical protein HMPREF9447_01871 [Bacteroides oleiciplenus YIT
12058]
Length = 506
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/76 (47%), Positives = 46/76 (60%), Gaps = 5/76 (6%)
Query: 75 LPERKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLT 134
P+RKV ++ DFG VG+G TEAF KA+ +KGG L VP G+W TG L
Sbjct: 45 FPDRKVNLA--DFGAVGNGEELCTEAFAKAI---DALAEKGGGHLIVPAGVWFTGPIVLK 99
Query: 135 SNFTLFLERGAVMLGS 150
SN L LE+GA++L S
Sbjct: 100 SNIDLHLEKGAIILFS 115
>gi|189459631|ref|ZP_03008416.1| hypothetical protein BACCOP_00257 [Bacteroides coprocola DSM 17136]
gi|189433713|gb|EDV02698.1| polygalacturonase (pectinase) [Bacteroides coprocola DSM 17136]
Length = 535
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 34/68 (50%), Positives = 44/68 (64%), Gaps = 3/68 (4%)
Query: 81 AMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLF 140
+ SI +FG V DG T NTEAF KA++ +KGG ++ VP GLWLTG L SN L+
Sbjct: 58 SRSITEFGAVADGITLNTEAFDKAIK---AVAEKGGGKVIVPAGLWLTGPIVLQSNINLY 114
Query: 141 LERGAVML 148
LE A++L
Sbjct: 115 LEENALVL 122
>gi|325300479|ref|YP_004260396.1| Exo-poly-alpha-galacturonosidase [Bacteroides salanitronis DSM
18170]
gi|324320032|gb|ADY37923.1| Exo-poly-alpha-galacturonosidase [Bacteroides salanitronis DSM
18170]
Length = 493
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/76 (47%), Positives = 46/76 (60%), Gaps = 5/76 (6%)
Query: 75 LPERKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLT 134
P+ +V +S DFG VGDGT TEAF +A+ KGG +L VP G+W TG L
Sbjct: 45 FPDNEVNLS--DFGAVGDGTQLCTEAFARAI---DALSQKGGGRLTVPAGVWFTGPIVLK 99
Query: 135 SNFTLFLERGAVMLGS 150
SN L +E+GAV+L S
Sbjct: 100 SNINLHVEKGAVILFS 115
>gi|325106419|ref|YP_004276073.1| glycoside hydrolase family protein [Pedobacter saltans DSM 12145]
gi|324975267|gb|ADY54251.1| glycoside hydrolase family 28 [Pedobacter saltans DSM 12145]
Length = 554
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/76 (47%), Positives = 44/76 (57%), Gaps = 5/76 (6%)
Query: 75 LPERKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLT 134
P+ KV I DFGG+GDG NT+AF KA+ + KGG L VP G+WLTG
Sbjct: 42 FPDNKV--KITDFGGIGDGIYLNTQAFSKAIDALSA---KGGGMLTVPAGIWLTGPIQFK 96
Query: 135 SNFTLFLERGAVMLGS 150
SN L LE A++L S
Sbjct: 97 SNINLHLEDRAIILFS 112
>gi|326532444|dbj|BAK05151.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 530
Score = 65.9 bits (159), Expect = 6e-09, Method: Composition-based stats.
Identities = 37/68 (54%), Positives = 46/68 (67%), Gaps = 3/68 (4%)
Query: 84 IKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFLER 143
+++FGGVGDG T NT AF AV + ++GG +L VP G WLT FNLTS+ TLFL
Sbjct: 117 LREFGGVGDGRTLNTAAFEAAVAAIS---ERGGGRLTVPAGRWLTAPFNLTSHMTLFLAA 173
Query: 144 GAVMLGSQ 151
GA +LG Q
Sbjct: 174 GAEILGVQ 181
>gi|18397713|ref|NP_566292.1| polygalacturonase-like protein [Arabidopsis thaliana]
gi|30680007|ref|NP_850526.1| polygalacturonase-like protein [Arabidopsis thaliana]
gi|7549636|gb|AAF63821.1| unknown protein [Arabidopsis thaliana]
gi|332640933|gb|AEE74454.1| polygalacturonase-like protein [Arabidopsis thaliana]
gi|332640934|gb|AEE74455.1| polygalacturonase-like protein [Arabidopsis thaliana]
Length = 377
Score = 65.5 bits (158), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 30/41 (73%), Positives = 34/41 (82%)
Query: 111 FGDKGGAQLNVPEGLWLTGSFNLTSNFTLFLERGAVMLGSQ 151
F DKGGAQL VP G WLTGSF+LTS+ TLFLE GAV++ SQ
Sbjct: 3 FADKGGAQLYVPPGHWLTGSFSLTSHLTLFLENGAVIVASQ 43
>gi|320166922|gb|EFW43821.1| polygalacturonase [Capsaspora owczarzaki ATCC 30864]
Length = 448
Score = 65.5 bits (158), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 38/97 (39%), Positives = 54/97 (55%), Gaps = 11/97 (11%)
Query: 62 PDSCAAGLLGDQY--------LPERKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGD 113
P + A+ DQY LP R + +I D+G VGD T NT F K V + GD
Sbjct: 28 PRAPASASYIDQYPSSTTPITLPVRSKSFNIVDYGAVGDNVTVNTAVFNKIVALVAANGD 87
Query: 114 KGGAQLNVPEGLWLTGSFNLTSNFTLFLERGAVMLGS 150
++ +P G++++G+FNLTS+ TL L GAV+ GS
Sbjct: 88 ---GEIYIPPGIFVSGTFNLTSHVTLRLASGAVLAGS 121
>gi|357158595|ref|XP_003578178.1| PREDICTED: probable polygalacturonase-like [Brachypodium
distachyon]
Length = 532
Score = 65.1 bits (157), Expect = 9e-09, Method: Composition-based stats.
Identities = 40/90 (44%), Positives = 53/90 (58%), Gaps = 4/90 (4%)
Query: 62 PDSCAAGLLGDQYLPERKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNV 121
P +G + Q++ V +++FGG+GDG T NT AF AV + ++GG +L V
Sbjct: 98 PKRAPSGAVMGQWVASPPV-YDLREFGGIGDGRTLNTAAFEAAVAAIS---ERGGGRLTV 153
Query: 122 PEGLWLTGSFNLTSNFTLFLERGAVMLGSQ 151
P G WLT FNLTS TLFL GA +LG Q
Sbjct: 154 PAGRWLTAPFNLTSGMTLFLASGAEILGIQ 183
>gi|399025028|ref|ZP_10727046.1| endopolygalacturonase [Chryseobacterium sp. CF314]
gi|398079129|gb|EJL70001.1| endopolygalacturonase [Chryseobacterium sp. CF314]
Length = 337
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/70 (47%), Positives = 43/70 (61%), Gaps = 3/70 (4%)
Query: 82 MSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFL 141
+SI +GGV G+ NTEAFRKA+ KGG +L VP G+WLTG L SN L +
Sbjct: 48 VSIIQYGGVAGGSVKNTEAFRKAI---DDLSKKGGGKLVVPRGMWLTGPIELKSNINLHV 104
Query: 142 ERGAVMLGSQ 151
E GA ++ S+
Sbjct: 105 EEGAFIIFSK 114
>gi|281421112|ref|ZP_06252111.1| exo-poly-alpha-D-galacturonosidase [Prevotella copri DSM 18205]
gi|281404647|gb|EFB35327.1| exo-poly-alpha-D-galacturonosidase [Prevotella copri DSM 18205]
Length = 524
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 45/69 (65%), Gaps = 3/69 (4%)
Query: 82 MSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFL 141
+++KDFG +GDG++ T AF KA+ KGG +L VP+G+W TG L SN L L
Sbjct: 49 VNLKDFGAIGDGSSLCTTAFAKAI---DALTQKGGGKLIVPQGVWFTGPIVLKSNINLHL 105
Query: 142 ERGAVMLGS 150
E+GAV+L S
Sbjct: 106 EKGAVILFS 114
>gi|198277233|ref|ZP_03209764.1| hypothetical protein BACPLE_03445 [Bacteroides plebeius DSM 17135]
gi|198269731|gb|EDY94001.1| polygalacturonase (pectinase) [Bacteroides plebeius DSM 17135]
Length = 478
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/67 (46%), Positives = 43/67 (64%), Gaps = 3/67 (4%)
Query: 82 MSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFL 141
++IKDFG V DG T NTEA KA+ Q +GG ++ +P+GLWLTG L SN L+
Sbjct: 14 VNIKDFGAVADGKTLNTEAINKAI---QKVSARGGGKVIIPQGLWLTGPIELQSNVNLYT 70
Query: 142 ERGAVML 148
E +++L
Sbjct: 71 EENSLIL 77
>gi|393781893|ref|ZP_10370086.1| hypothetical protein HMPREF1071_00954 [Bacteroides salyersiae
CL02T12C01]
gi|392674779|gb|EIY68222.1| hypothetical protein HMPREF1071_00954 [Bacteroides salyersiae
CL02T12C01]
Length = 509
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/76 (47%), Positives = 46/76 (60%), Gaps = 5/76 (6%)
Query: 75 LPERKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLT 134
P+ KV S+ DFG VG+G TEAF KA+ + +GG L VP G+WLTG L
Sbjct: 44 FPDLKV--SLPDFGAVGNGVELCTEAFEKAI---ETLSSRGGGHLIVPAGIWLTGPIVLK 98
Query: 135 SNFTLFLERGAVMLGS 150
SN L +E+GAV+L S
Sbjct: 99 SNIDLHIEKGAVVLFS 114
>gi|409199011|ref|ZP_11227674.1| endopolygalacturonase [Marinilabilia salmonicolor JCM 21150]
Length = 568
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 43/67 (64%), Gaps = 3/67 (4%)
Query: 81 AMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLF 140
A+SI +FG VGD T N EAF +A+ + +KGG ++ VP G+WLTG + SN L
Sbjct: 58 AVSIVEFGAVGDAVTPNGEAFTRAIEQVS---EKGGGRVIVPRGIWLTGPIQMKSNINLH 114
Query: 141 LERGAVM 147
LE GAV+
Sbjct: 115 LEDGAVI 121
>gi|402308351|ref|ZP_10827360.1| pectate lyase family protein [Prevotella sp. MSX73]
gi|400375795|gb|EJP28690.1| pectate lyase family protein [Prevotella sp. MSX73]
Length = 470
Score = 64.3 bits (155), Expect = 1e-08, Method: Composition-based stats.
Identities = 34/76 (44%), Positives = 47/76 (61%), Gaps = 5/76 (6%)
Query: 75 LPERKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLT 134
+P+ +V S+ DFGG GDG T NTEAF KA M KGG L+VP G++LTG +
Sbjct: 44 IPDNRV--SLPDFGGKGDGVTMNTEAFGKA---MSELSKKGGGHLDVPAGVYLTGMISFK 98
Query: 135 SNFTLFLERGAVMLGS 150
N L L++ A+++ S
Sbjct: 99 DNIDLHLDKNAIIVLS 114
>gi|288924892|ref|ZP_06418828.1| exo-poly-alpha-D-galacturonosidase [Prevotella buccae D17]
gi|288338082|gb|EFC76432.1| exo-poly-alpha-D-galacturonosidase [Prevotella buccae D17]
Length = 470
Score = 64.3 bits (155), Expect = 1e-08, Method: Composition-based stats.
Identities = 34/76 (44%), Positives = 47/76 (61%), Gaps = 5/76 (6%)
Query: 75 LPERKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLT 134
+P+ +V S+ DFGG GDG T NTEAF KA M KGG L+VP G++LTG +
Sbjct: 44 IPDNRV--SLPDFGGKGDGVTMNTEAFGKA---MSELSKKGGGHLDVPAGVYLTGMISFK 98
Query: 135 SNFTLFLERGAVMLGS 150
N L L++ A+++ S
Sbjct: 99 DNIDLHLDKNAIIVLS 114
>gi|315607918|ref|ZP_07882911.1| galacturan 1,4-alpha-galacturonidase [Prevotella buccae ATCC 33574]
gi|315250387|gb|EFU30383.1| galacturan 1,4-alpha-galacturonidase [Prevotella buccae ATCC 33574]
Length = 470
Score = 64.3 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 34/76 (44%), Positives = 47/76 (61%), Gaps = 5/76 (6%)
Query: 75 LPERKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLT 134
+P+ +V S+ DFGG GDG T NTEAF KA M KGG L+VP G++LTG +
Sbjct: 44 IPDNRV--SLPDFGGKGDGVTMNTEAFGKA---MSELSKKGGGHLDVPAGVYLTGMISFK 98
Query: 135 SNFTLFLERGAVMLGS 150
N L L++ A+++ S
Sbjct: 99 DNIDLHLDKNAIIVLS 114
>gi|423223780|ref|ZP_17210249.1| hypothetical protein HMPREF1062_02435 [Bacteroides cellulosilyticus
CL02T12C19]
gi|392638155|gb|EIY32008.1| hypothetical protein HMPREF1062_02435 [Bacteroides cellulosilyticus
CL02T12C19]
Length = 507
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/76 (47%), Positives = 45/76 (59%), Gaps = 5/76 (6%)
Query: 75 LPERKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLT 134
P+RKV ++ DFG VG+G T AF KA+ +KGG L VP G+W TG L
Sbjct: 45 FPDRKVNLA--DFGAVGNGEELCTAAFAKAI---DALAEKGGGHLIVPAGVWFTGPIVLK 99
Query: 135 SNFTLFLERGAVMLGS 150
SN L LE+GAV+L S
Sbjct: 100 SNIDLHLEKGAVILFS 115
>gi|423288978|ref|ZP_17267829.1| hypothetical protein HMPREF1069_02872 [Bacteroides ovatus
CL02T12C04]
gi|423294865|ref|ZP_17272992.1| hypothetical protein HMPREF1070_01657 [Bacteroides ovatus
CL03T12C18]
gi|392668742|gb|EIY62236.1| hypothetical protein HMPREF1069_02872 [Bacteroides ovatus
CL02T12C04]
gi|392676056|gb|EIY69497.1| hypothetical protein HMPREF1070_01657 [Bacteroides ovatus
CL03T12C18]
Length = 524
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/67 (46%), Positives = 43/67 (64%), Gaps = 3/67 (4%)
Query: 82 MSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFL 141
++I DFG DG T NTEA KA++ + DKGG ++ +PEGLWLTG L SN L
Sbjct: 58 VNICDFGAKSDGVTLNTEAINKAIKVVH---DKGGGKVIIPEGLWLTGPIVLQSNVNLHA 114
Query: 142 ERGAVML 148
E+ A+++
Sbjct: 115 EKNALIV 121
>gi|383114359|ref|ZP_09935123.1| hypothetical protein BSGG_1470 [Bacteroides sp. D2]
gi|313693935|gb|EFS30770.1| hypothetical protein BSGG_1470 [Bacteroides sp. D2]
Length = 524
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/67 (46%), Positives = 43/67 (64%), Gaps = 3/67 (4%)
Query: 82 MSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFL 141
++I DFG DG T NTEA KA++ + DKGG ++ +PEGLWLTG L SN L
Sbjct: 58 VNICDFGAKSDGVTLNTEAINKAIKVVH---DKGGGKVIIPEGLWLTGPIVLQSNVNLHA 114
Query: 142 ERGAVML 148
E+ A+++
Sbjct: 115 EKNALIV 121
>gi|237717974|ref|ZP_04548455.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. 2_2_4]
gi|229452776|gb|EEO58567.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. 2_2_4]
Length = 524
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/67 (46%), Positives = 43/67 (64%), Gaps = 3/67 (4%)
Query: 82 MSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFL 141
++I DFG DG T NTEA KA++ + DKGG ++ +PEGLWLTG L SN L
Sbjct: 58 VNICDFGAKSDGVTLNTEAINKAIKVVH---DKGGGKVIIPEGLWLTGPIVLQSNVNLHA 114
Query: 142 ERGAVML 148
E+ A+++
Sbjct: 115 EKNALIV 121
>gi|160886912|ref|ZP_02067915.1| hypothetical protein BACOVA_04926 [Bacteroides ovatus ATCC 8483]
gi|156107323|gb|EDO09068.1| polygalacturonase (pectinase) [Bacteroides ovatus ATCC 8483]
Length = 518
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/67 (46%), Positives = 43/67 (64%), Gaps = 3/67 (4%)
Query: 82 MSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFL 141
++I DFG DG T NTEA KA++ + DKGG ++ +PEGLWLTG L SN L
Sbjct: 52 VNICDFGAKSDGVTLNTEAINKAIKVVH---DKGGGKVIIPEGLWLTGPIVLQSNVNLHA 108
Query: 142 ERGAVML 148
E+ A+++
Sbjct: 109 EKNALIV 115
>gi|379723469|ref|YP_005315600.1| glycoside hydrolase family protein [Paenibacillus mucilaginosus
3016]
gi|386726203|ref|YP_006192529.1| glycoside hydrolase [Paenibacillus mucilaginosus K02]
gi|378572141|gb|AFC32451.1| glycoside hydrolase family 28 [Paenibacillus mucilaginosus 3016]
gi|384093328|gb|AFH64764.1| glycoside hydrolase family protein [Paenibacillus mucilaginosus
K02]
Length = 530
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 49/82 (59%), Gaps = 5/82 (6%)
Query: 70 LGDQYLPERKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTG 129
+G +P+R + S+ D+G VGDG T NTEAF KA+ GG ++ +P G+WLTG
Sbjct: 18 VGQPSIPDR--SFSVTDYGAVGDGVTDNTEAFHKAI---AACSQAGGGRVVIPAGVWLTG 72
Query: 130 SFNLTSNFTLFLERGAVMLGSQ 151
+L S L + GA++L S+
Sbjct: 73 PLSLASRLDLHAQAGALVLFSR 94
>gi|317505480|ref|ZP_07963398.1| polygalacturonase [Prevotella salivae DSM 15606]
gi|315663393|gb|EFV03142.1| polygalacturonase [Prevotella salivae DSM 15606]
Length = 494
Score = 63.5 bits (153), Expect = 3e-08, Method: Composition-based stats.
Identities = 35/76 (46%), Positives = 46/76 (60%), Gaps = 5/76 (6%)
Query: 75 LPERKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLT 134
+P +V S+ DFG V DG T NTEAFRKA+ + GG L VP G++LTG +L
Sbjct: 65 IPNNQV--SLTDFGAVPDGITLNTEAFRKAISKLTKL---GGGHLIVPAGIYLTGPISLK 119
Query: 135 SNFTLFLERGAVMLGS 150
N + LER A++L S
Sbjct: 120 DNIDIHLERNALILFS 135
>gi|346224313|ref|ZP_08845455.1| glycoside hydrolase family protein [Anaerophaga thermohalophila DSM
12881]
Length = 572
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/67 (49%), Positives = 43/67 (64%), Gaps = 3/67 (4%)
Query: 81 AMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLF 140
A+SI DFG VGDG N++AF +A+ +KGG ++ VP GLWLTG + SN L
Sbjct: 62 AVSIVDFGAVGDGVFDNSDAFAQAI---DNVSEKGGGRVVVPRGLWLTGPIIMKSNIDLH 118
Query: 141 LERGAVM 147
LE GAV+
Sbjct: 119 LEDGAVV 125
>gi|146295422|ref|YP_001179193.1| galacturan 1,4-alpha-galacturonidase [Caldicellulosiruptor
saccharolyticus DSM 8903]
gi|145408998|gb|ABP66002.1| Galacturan 1,4-alpha-galacturonidase [Caldicellulosiruptor
saccharolyticus DSM 8903]
Length = 447
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 46/66 (69%), Gaps = 3/66 (4%)
Query: 82 MSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFL 141
++++DFG VG+G +TEAF+KA+ + ++GG + VP G++LTG +L SN TL++
Sbjct: 3 LNVRDFGAVGNGQVKDTEAFKKAI---EASWEQGGGTVYVPAGVYLTGPIHLKSNITLYI 59
Query: 142 ERGAVM 147
E GA +
Sbjct: 60 ESGATL 65
>gi|224536305|ref|ZP_03676844.1| hypothetical protein BACCELL_01177, partial [Bacteroides
cellulosilyticus DSM 14838]
gi|224522067|gb|EEF91172.1| hypothetical protein BACCELL_01177 [Bacteroides cellulosilyticus
DSM 14838]
Length = 434
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/76 (47%), Positives = 46/76 (60%), Gaps = 5/76 (6%)
Query: 75 LPERKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLT 134
P+RKV ++ DFG VG+G T AF KA+ + +KGG L VP G+W TG L
Sbjct: 45 FPDRKVNLA--DFGAVGNGEELCTAAFAKAIDTL---AEKGGGHLIVPAGVWFTGPIVLK 99
Query: 135 SNFTLFLERGAVMLGS 150
SN L LE+GAV+L S
Sbjct: 100 SNIDLHLEKGAVILFS 115
>gi|21593399|gb|AAM65366.1| polygalacturonase-like protein [Arabidopsis thaliana]
Length = 377
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/41 (70%), Positives = 33/41 (80%)
Query: 111 FGDKGGAQLNVPEGLWLTGSFNLTSNFTLFLERGAVMLGSQ 151
F DKGGAQL VP G WLTGSF+LTS+ TLFLE AV++ SQ
Sbjct: 3 FADKGGAQLYVPPGHWLTGSFSLTSHLTLFLENDAVIVASQ 43
>gi|390944044|ref|YP_006407805.1| endopolygalacturonase [Belliella baltica DSM 15883]
gi|390417472|gb|AFL85050.1| endopolygalacturonase [Belliella baltica DSM 15883]
Length = 570
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/70 (47%), Positives = 42/70 (60%), Gaps = 3/70 (4%)
Query: 82 MSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFL 141
+SI + G V DG T NTEAF KA+ KGG ++ VP G+WLTG SN L L
Sbjct: 60 LSILEHGAVSDGVTKNTEAFAKAI---DAVASKGGGKVLVPRGIWLTGPIQFKSNINLHL 116
Query: 142 ERGAVMLGSQ 151
E GA++L S+
Sbjct: 117 EAGALILFSK 126
>gi|160880699|ref|YP_001559667.1| glycoside hydrolase family protein [Clostridium phytofermentans
ISDg]
gi|160429365|gb|ABX42928.1| glycoside hydrolase family 28 [Clostridium phytofermentans ISDg]
Length = 474
Score = 62.8 bits (151), Expect = 4e-08, Method: Composition-based stats.
Identities = 32/73 (43%), Positives = 43/73 (58%), Gaps = 5/73 (6%)
Query: 75 LPERKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLT 134
P+R+V SI D+ V G SNT A +A+ + G G +NVPEG+WLTG L
Sbjct: 11 FPDRQV--SITDYKAVSGGIESNTAAINQAITELSKLG---GGTVNVPEGIWLTGPITLK 65
Query: 135 SNFTLFLERGAVM 147
SN L LE+GA++
Sbjct: 66 SNINLHLEKGALI 78
>gi|337750378|ref|YP_004644540.1| glycoside hydrolase family protein [Paenibacillus mucilaginosus
KNP414]
gi|336301567|gb|AEI44670.1| glycoside hydrolase family 28 [Paenibacillus mucilaginosus KNP414]
Length = 530
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 47/77 (61%), Gaps = 5/77 (6%)
Query: 75 LPERKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLT 134
+P+R + S+ D+G VGDG T NTEAF KA+ GG ++ +P G+WLTG +L
Sbjct: 23 IPDR--SFSVTDYGAVGDGVTDNTEAFHKAI---AACSQAGGGRVVIPAGVWLTGPLSLA 77
Query: 135 SNFTLFLERGAVMLGSQ 151
S L + GA++L S+
Sbjct: 78 SRLDLHAQAGALVLFSR 94
>gi|380693857|ref|ZP_09858716.1| exo-poly-alpha-D-galacturonosidase [Bacteroides faecis MAJ27]
Length = 525
Score = 62.4 bits (150), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 44/67 (65%), Gaps = 3/67 (4%)
Query: 82 MSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFL 141
++I+DFG + DG T NTEA A++ + KGG ++ +PEGLWLTG L SN L+
Sbjct: 59 VNIRDFGALSDGVTLNTEAINNAIKTVSS---KGGGKVIIPEGLWLTGPVVLLSNVNLYT 115
Query: 142 ERGAVML 148
E+ A+++
Sbjct: 116 EKNALIV 122
>gi|336415491|ref|ZP_08595830.1| hypothetical protein HMPREF1017_02938 [Bacteroides ovatus
3_8_47FAA]
gi|335940370|gb|EGN02237.1| hypothetical protein HMPREF1017_02938 [Bacteroides ovatus
3_8_47FAA]
Length = 524
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 42/67 (62%), Gaps = 3/67 (4%)
Query: 82 MSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFL 141
++I DFG DG T NTEA A++ + DKGG ++ +PEGLWLTG L SN L
Sbjct: 58 VNICDFGAKSDGVTLNTEAINNAIKVVH---DKGGGKVVIPEGLWLTGPIVLQSNVNLHA 114
Query: 142 ERGAVML 148
E+ A+++
Sbjct: 115 EKNALIV 121
>gi|299148436|ref|ZP_07041498.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. 3_1_23]
gi|298513197|gb|EFI37084.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. 3_1_23]
Length = 518
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 42/67 (62%), Gaps = 3/67 (4%)
Query: 82 MSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFL 141
++I DFG DG T NTEA A++ + DKGG ++ +PEGLWLTG L SN L
Sbjct: 52 VNICDFGAKSDGVTLNTEAINNAIKVVH---DKGGGKVVIPEGLWLTGPIVLQSNVNLHA 108
Query: 142 ERGAVML 148
E+ A+++
Sbjct: 109 EKNALIV 115
>gi|281419687|ref|ZP_06250686.1| exo-poly-alpha-D-galacturonosidase [Prevotella copri DSM 18205]
gi|281406216|gb|EFB36896.1| exo-poly-alpha-D-galacturonosidase [Prevotella copri DSM 18205]
Length = 467
Score = 62.4 bits (150), Expect = 6e-08, Method: Composition-based stats.
Identities = 31/70 (44%), Positives = 45/70 (64%), Gaps = 3/70 (4%)
Query: 82 MSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFL 141
+SI ++GG GDG T NT+AF KA+ + G G LNVP G++LTG +L N L L
Sbjct: 46 VSILEYGGNGDGLTMNTQAFAKAISKLNKMG---GGHLNVPAGIYLTGLISLKDNIDLHL 102
Query: 142 ERGAVMLGSQ 151
E+ A+++ S+
Sbjct: 103 EKNAIIVLSE 112
>gi|383120469|ref|ZP_09941197.1| hypothetical protein BSIG_2521 [Bacteroides sp. 1_1_6]
gi|382985005|gb|EES68560.2| hypothetical protein BSIG_2521 [Bacteroides sp. 1_1_6]
Length = 528
Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 44/67 (65%), Gaps = 3/67 (4%)
Query: 82 MSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFL 141
++I+DFG + DG T NTEA A++ + KGG ++ +PEGLWLTG L SN L+
Sbjct: 59 VNIRDFGALSDGVTLNTEAINNAIKAVNS---KGGGKVIIPEGLWLTGPVVLLSNVNLYA 115
Query: 142 ERGAVML 148
E+ A+++
Sbjct: 116 EKNALIV 122
>gi|198275291|ref|ZP_03207822.1| hypothetical protein BACPLE_01450 [Bacteroides plebeius DSM 17135]
gi|198271874|gb|EDY96144.1| polygalacturonase (pectinase) [Bacteroides plebeius DSM 17135]
Length = 511
Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 32/63 (50%), Positives = 41/63 (65%), Gaps = 3/63 (4%)
Query: 88 GGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFLERGAVM 147
G VGDG T NT++ + A+ + KGG QL P G +LTGS L SN TL+LE+ AV+
Sbjct: 30 GAVGDGKTLNTQSLQSAIDALHA---KGGGQLYFPAGRYLTGSLQLKSNVTLYLEKEAVL 86
Query: 148 LGS 150
LGS
Sbjct: 87 LGS 89
>gi|29349531|ref|NP_813034.1| exo-poly-alpha-D-galacturonosidase [Bacteroides thetaiotaomicron
VPI-5482]
gi|29341440|gb|AAO79228.1| exo-poly-alpha-D-galacturonosidase precursor [Bacteroides
thetaiotaomicron VPI-5482]
Length = 528
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 44/67 (65%), Gaps = 3/67 (4%)
Query: 82 MSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFL 141
++I+DFG + DG T NTEA A++ + KGG ++ +PEGLWLTG L SN L+
Sbjct: 59 VNIRDFGALSDGVTLNTEAINNAIKAVSS---KGGGKVIIPEGLWLTGPVVLLSNVNLYA 115
Query: 142 ERGAVML 148
E+ A+++
Sbjct: 116 EKNALIV 122
>gi|298385027|ref|ZP_06994586.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. 1_1_14]
gi|298262171|gb|EFI05036.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. 1_1_14]
Length = 528
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 44/67 (65%), Gaps = 3/67 (4%)
Query: 82 MSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFL 141
++I+DFG + DG T NTEA A++ + KGG ++ +PEGLWLTG L SN L+
Sbjct: 59 VNIRDFGALSDGVTLNTEAINNAIKAVSS---KGGGKVIIPEGLWLTGPVVLLSNVNLYA 115
Query: 142 ERGAVML 148
E+ A+++
Sbjct: 116 EKNALIV 122
>gi|125526876|gb|EAY74990.1| hypothetical protein OsI_02888 [Oryza sativa Indica Group]
Length = 445
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 39/77 (50%), Positives = 48/77 (62%), Gaps = 1/77 (1%)
Query: 76 PERKVAMSIKDFGGVGDGT-TSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLT 134
P R MS+ FGG G T +T AF+ AV ++ GGA L VP G+WLTG FNLT
Sbjct: 36 PRRGAWMSLASFGGGGGDGRTLSTAAFQAAVASIERRRAPGGALLYVPPGVWLTGPFNLT 95
Query: 135 SNFTLFLERGAVMLGSQ 151
S+ TLFL RGAV+ +Q
Sbjct: 96 SHMTLFLARGAVIRATQ 112
>gi|125571200|gb|EAZ12715.1| hypothetical protein OsJ_02632 [Oryza sativa Japonica Group]
Length = 419
Score = 61.6 bits (148), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 39/77 (50%), Positives = 48/77 (62%), Gaps = 1/77 (1%)
Query: 76 PERKVAMSIKDFGGVGDGT-TSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLT 134
P R MS+ FGG G T +T AF+ AV ++ GGA L VP G+WLTG FNLT
Sbjct: 36 PRRGAWMSLASFGGGGGDGRTLSTAAFQAAVASIERRRAPGGALLYVPPGVWLTGPFNLT 95
Query: 135 SNFTLFLERGAVMLGSQ 151
S+ TLFL RGAV+ +Q
Sbjct: 96 SHMTLFLARGAVIRATQ 112
>gi|354603309|ref|ZP_09021308.1| hypothetical protein HMPREF9450_00223 [Alistipes indistinctus YIT
12060]
gi|353349186|gb|EHB93452.1| hypothetical protein HMPREF9450_00223 [Alistipes indistinctus YIT
12060]
Length = 495
Score = 61.6 bits (148), Expect = 1e-07, Method: Composition-based stats.
Identities = 30/67 (44%), Positives = 44/67 (65%), Gaps = 3/67 (4%)
Query: 84 IKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFLER 143
+ DFG V DGTT NT A ++A+ + ++GG +L P G +++G+ +L S TL LE
Sbjct: 26 VSDFGAVADGTTLNTRALQRAIDVIH---EEGGGKLIFPLGRYVSGTLHLLSGVTLHLES 82
Query: 144 GAVMLGS 150
GAV+LGS
Sbjct: 83 GAVLLGS 89
>gi|399024363|ref|ZP_10726403.1| endopolygalacturonase [Chryseobacterium sp. CF314]
gi|398080600|gb|EJL71406.1| endopolygalacturonase [Chryseobacterium sp. CF314]
Length = 467
Score = 61.2 bits (147), Expect = 1e-07, Method: Composition-based stats.
Identities = 32/74 (43%), Positives = 46/74 (62%), Gaps = 3/74 (4%)
Query: 78 RKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNF 137
RK + DFG +GDG T NT AF+KA+ + +GG ++ VP+G++LTG+ L SN
Sbjct: 47 RKKDYLVTDFGAIGDGKTKNTGAFKKAI---EKCNVEGGGRVVVPKGIFLTGAIYLKSNV 103
Query: 138 TLFLERGAVMLGSQ 151
L + GA +L SQ
Sbjct: 104 DLHISEGATILFSQ 117
>gi|329957634|ref|ZP_08298109.1| polygalacturonase [Bacteroides clarus YIT 12056]
gi|328522511|gb|EGF49620.1| polygalacturonase [Bacteroides clarus YIT 12056]
Length = 533
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 43/68 (63%), Gaps = 3/68 (4%)
Query: 81 AMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLF 140
+SI FG GDGTT NT+A A++ + KGG ++ +PEGLWLTG L SN L+
Sbjct: 57 TVSILQFGAKGDGTTLNTKAINDAIKAVNA---KGGGKVVIPEGLWLTGPIELLSNVNLY 113
Query: 141 LERGAVML 148
E+ A+++
Sbjct: 114 TEKNALVV 121
>gi|329956871|ref|ZP_08297439.1| polygalacturonase [Bacteroides clarus YIT 12056]
gi|328523628|gb|EGF50720.1| polygalacturonase [Bacteroides clarus YIT 12056]
Length = 522
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 42/67 (62%), Gaps = 3/67 (4%)
Query: 82 MSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFL 141
+ I+DFG DG T NTEA A++ +KGG ++ +PEGLWLTG L +N L +
Sbjct: 58 VDIRDFGAKADGETLNTEAINNAIK---AVSEKGGGKVVIPEGLWLTGPVVLQNNVNLHV 114
Query: 142 ERGAVML 148
E+ A++L
Sbjct: 115 EKNALVL 121
>gi|395212459|ref|ZP_10399800.1| glycoside hydrolase [Pontibacter sp. BAB1700]
gi|394457168|gb|EJF11353.1| glycoside hydrolase [Pontibacter sp. BAB1700]
Length = 582
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 45/71 (63%), Gaps = 3/71 (4%)
Query: 81 AMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLF 140
++SI DFG V DG T +T AF KA+ + KGG ++ VP G+WLTG L SN L
Sbjct: 73 SVSITDFGAVSDGLTKSTAAFEKAIADVVA---KGGGKVIVPRGMWLTGPIVLKSNINLH 129
Query: 141 LERGAVMLGSQ 151
+E GA++L S+
Sbjct: 130 VEDGALVLFSK 140
>gi|86143268|ref|ZP_01061670.1| exo-poly-alpha-D-galacturonosidase precursor [Leeuwenhoekiella
blandensis MED217]
gi|85830173|gb|EAQ48633.1| exo-poly-alpha-D-galacturonosidase precursor [Leeuwenhoekiella
blandensis MED217]
Length = 547
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/67 (49%), Positives = 42/67 (62%), Gaps = 3/67 (4%)
Query: 84 IKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFLER 143
I DFG GDG NTEAF KA + + F +GG + VPEG+W TG L SN L L++
Sbjct: 50 ITDFGAKGDGQFKNTEAFHKA--FAKAFS-QGGGTVVVPEGIWYTGPITLKSNINLHLKQ 106
Query: 144 GAVMLGS 150
GA++L S
Sbjct: 107 GALILFS 113
>gi|167762022|ref|ZP_02434149.1| hypothetical protein BACSTE_00368 [Bacteroides stercoris ATCC
43183]
gi|167700114|gb|EDS16693.1| polygalacturonase (pectinase) [Bacteroides stercoris ATCC 43183]
Length = 516
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 45/76 (59%), Gaps = 5/76 (6%)
Query: 75 LPERKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLT 134
P+R V ++K+F VG+G T T AF A+ ++GG L VP G+WLTG L
Sbjct: 55 FPDRTV--NLKEFNAVGNGETLCTSAFADAI---NALSEQGGGHLVVPAGVWLTGPIVLK 109
Query: 135 SNFTLFLERGAVMLGS 150
SN L LE+GAV+L S
Sbjct: 110 SNIDLHLEKGAVILFS 125
>gi|423223575|ref|ZP_17210044.1| hypothetical protein HMPREF1062_02230 [Bacteroides cellulosilyticus
CL02T12C19]
gi|392638200|gb|EIY32047.1| hypothetical protein HMPREF1062_02230 [Bacteroides cellulosilyticus
CL02T12C19]
Length = 532
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 47/74 (63%), Gaps = 5/74 (6%)
Query: 75 LPERKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLT 134
+PE +V S+ ++GG+G+G T NT+AF A+ ++GG L VPEG+WLTG L
Sbjct: 45 IPELEV--SLAEYGGIGNGMTLNTQAFAAAI---ADLSERGGGHLIVPEGIWLTGPIVLK 99
Query: 135 SNFTLFLERGAVML 148
SN L + + A++L
Sbjct: 100 SNIDLHVLKNAIVL 113
>gi|346223719|ref|ZP_08844861.1| glycoside hydrolase family protein [Anaerophaga thermohalophila DSM
12881]
Length = 567
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 43/70 (61%), Gaps = 3/70 (4%)
Query: 81 AMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLF 140
++I DFG +GDG T N+EAF ++ + GG ++ V G+WLTG + SN L+
Sbjct: 57 VVNISDFGAIGDGITDNSEAFAASIDDVAA---NGGGKVVVSRGIWLTGPIKMKSNINLY 113
Query: 141 LERGAVMLGS 150
LE GAV+L S
Sbjct: 114 LEDGAVVLFS 123
>gi|442804408|ref|YP_007372557.1| polygalacturonase Pgl [Clostridium stercorarium subsp. stercorarium
DSM 8532]
gi|442740258|gb|AGC67947.1| polygalacturonase Pgl [Clostridium stercorarium subsp. stercorarium
DSM 8532]
Length = 430
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 44/69 (63%), Gaps = 3/69 (4%)
Query: 83 SIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFLE 142
+I DFG V DG T TEAF+KAV+ + + GG + VP G +LTG +L SN L ++
Sbjct: 8 NITDFGAVPDGKTLCTEAFKKAVKKCE---EAGGGTIYVPAGKFLTGPIHLVSNTNLHID 64
Query: 143 RGAVMLGSQ 151
GAV+L SQ
Sbjct: 65 AGAVLLFSQ 73
>gi|293370401|ref|ZP_06616955.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CMC 3f]
gi|292634549|gb|EFF53084.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CMC 3f]
Length = 525
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 43/69 (62%), Gaps = 3/69 (4%)
Query: 82 MSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFL 141
++I DFG +G T NTEA A++ + DKGG ++ +PEGLWLTG L SN L
Sbjct: 59 VNICDFGAKSNGVTLNTEAINNAIKAVH---DKGGGKVVIPEGLWLTGPIVLQSNVNLHA 115
Query: 142 ERGAVMLGS 150
E+ A+++ S
Sbjct: 116 EKNALIVFS 124
>gi|196228361|ref|ZP_03127228.1| Exo-poly-alpha-galacturonosidase [Chthoniobacter flavus Ellin428]
gi|196227764|gb|EDY22267.1| Exo-poly-alpha-galacturonosidase [Chthoniobacter flavus Ellin428]
Length = 469
Score = 59.3 bits (142), Expect = 4e-07, Method: Composition-based stats.
Identities = 33/76 (43%), Positives = 44/76 (57%), Gaps = 5/76 (6%)
Query: 75 LPERKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLT 134
+P+R V SI FGG GDG NTEAFR A+ Q GG ++ VP G + TG L
Sbjct: 39 IPQRSV--SILQFGGKGDGKALNTEAFRAAI---QACAKAGGGRVVVPPGTFRTGPIELA 93
Query: 135 SNFTLFLERGAVMLGS 150
S+ L +E+GA++ S
Sbjct: 94 SHVALIVEKGAIIQAS 109
>gi|393786391|ref|ZP_10374527.1| hypothetical protein HMPREF1068_00807 [Bacteroides nordii
CL02T12C05]
gi|392660020|gb|EIY53637.1| hypothetical protein HMPREF1068_00807 [Bacteroides nordii
CL02T12C05]
Length = 509
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/67 (46%), Positives = 41/67 (61%), Gaps = 3/67 (4%)
Query: 84 IKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFLER 143
+ DFG VG+G T+AF KA+ + +GG L VP G+WLTG L SN L +E+
Sbjct: 51 LPDFGAVGNGVELCTDAFAKAIETLSA---RGGGYLIVPAGIWLTGPIVLKSNINLHIEK 107
Query: 144 GAVMLGS 150
GAV+L S
Sbjct: 108 GAVILFS 114
>gi|423228811|ref|ZP_17215217.1| hypothetical protein HMPREF1063_01037 [Bacteroides dorei
CL02T00C15]
gi|423247623|ref|ZP_17228671.1| hypothetical protein HMPREF1064_04877 [Bacteroides dorei
CL02T12C06]
gi|392631516|gb|EIY25487.1| hypothetical protein HMPREF1064_04877 [Bacteroides dorei
CL02T12C06]
gi|392635550|gb|EIY29449.1| hypothetical protein HMPREF1063_01037 [Bacteroides dorei
CL02T00C15]
Length = 539
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 44/70 (62%), Gaps = 3/70 (4%)
Query: 81 AMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLF 140
+++I DFG DG T NT+A A++ + KGG ++ +PEGLWLTG L SN L+
Sbjct: 60 SVNIIDFGAKPDGITLNTKAINDAIQQVNA---KGGGKVIIPEGLWLTGPIELLSNVNLY 116
Query: 141 LERGAVMLGS 150
E+ A++L S
Sbjct: 117 TEKNALVLFS 126
>gi|150004535|ref|YP_001299279.1| glycoside hydrolase [Bacteroides vulgatus ATCC 8482]
gi|319643966|ref|ZP_07998541.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_40A]
gi|345518227|ref|ZP_08797681.1| glycoside hydrolase family 28 [Bacteroides sp. 4_3_47FAA]
gi|423312455|ref|ZP_17290392.1| hypothetical protein HMPREF1058_01004 [Bacteroides vulgatus
CL09T03C04]
gi|149932959|gb|ABR39657.1| glycoside hydrolase family 28 [Bacteroides vulgatus ATCC 8482]
gi|254835520|gb|EET15829.1| glycoside hydrolase family 28 [Bacteroides sp. 4_3_47FAA]
gi|317384490|gb|EFV65457.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_40A]
gi|392688143|gb|EIY81432.1| hypothetical protein HMPREF1058_01004 [Bacteroides vulgatus
CL09T03C04]
Length = 539
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 44/70 (62%), Gaps = 3/70 (4%)
Query: 81 AMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLF 140
+++I DFG DG T NT+A A++ + KGG ++ +PEGLWLTG L SN L+
Sbjct: 60 SVNIIDFGAKPDGITLNTKAINDAIQQVNA---KGGGKVIIPEGLWLTGPIELLSNVNLY 116
Query: 141 LERGAVMLGS 150
E+ A++L S
Sbjct: 117 TEKNALVLFS 126
>gi|237708712|ref|ZP_04539193.1| glycoside hydrolase family 28 protein [Bacteroides sp. 9_1_42FAA]
gi|265756017|ref|ZP_06090484.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_33FAA]
gi|345513499|ref|ZP_08793020.1| glycoside hydrolase family 28 protein [Bacteroides dorei 5_1_36/D4]
gi|423242356|ref|ZP_17223465.1| hypothetical protein HMPREF1065_04088 [Bacteroides dorei
CL03T12C01]
gi|229437348|gb|EEO47425.1| glycoside hydrolase family 28 protein [Bacteroides dorei 5_1_36/D4]
gi|229457138|gb|EEO62859.1| glycoside hydrolase family 28 protein [Bacteroides sp. 9_1_42FAA]
gi|263234095|gb|EEZ19696.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_33FAA]
gi|392639642|gb|EIY33458.1| hypothetical protein HMPREF1065_04088 [Bacteroides dorei
CL03T12C01]
Length = 539
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 43/68 (63%), Gaps = 3/68 (4%)
Query: 81 AMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLF 140
+++I DFG DG T NT+A A++ + KGG ++ +PEGLWLTG L SN L+
Sbjct: 60 SVNIIDFGAKPDGITLNTKAINDAIQQVNA---KGGGKVIIPEGLWLTGPIELLSNVNLY 116
Query: 141 LERGAVML 148
E+ A++L
Sbjct: 117 TEKNALVL 124
>gi|294778294|ref|ZP_06743720.1| polygalacturonase (pectinase) [Bacteroides vulgatus PC510]
gi|294447922|gb|EFG16496.1| polygalacturonase (pectinase) [Bacteroides vulgatus PC510]
Length = 539
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 44/70 (62%), Gaps = 3/70 (4%)
Query: 81 AMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLF 140
+++I DFG DG T NT+A A++ + KGG ++ +PEGLWLTG L SN L+
Sbjct: 60 SVNIIDFGAKPDGITLNTKAINDAIQQVNA---KGGGKVIIPEGLWLTGPIELLSNVNLY 116
Query: 141 LERGAVMLGS 150
E+ A++L S
Sbjct: 117 TEKNALVLFS 126
>gi|312136085|ref|YP_004003423.1| glycoside hydrolase family 28 [Caldicellulosiruptor owensensis OL]
gi|311776136|gb|ADQ05623.1| glycoside hydrolase family 28 [Caldicellulosiruptor owensensis OL]
Length = 447
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 46/70 (65%), Gaps = 3/70 (4%)
Query: 82 MSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFL 141
+++++FG G+G +TEAF+KA+ + +GG + VP G++ TG +L SN TL++
Sbjct: 3 VNVREFGAKGNGIDKDTEAFKKAIEECE---KQGGGTIFVPAGIYHTGPIHLKSNMTLYI 59
Query: 142 ERGAVMLGSQ 151
E GAV+ SQ
Sbjct: 60 ENGAVLKFSQ 69
>gi|386819250|ref|ZP_10106466.1| endopolygalacturonase [Joostella marina DSM 19592]
gi|386424356|gb|EIJ38186.1| endopolygalacturonase [Joostella marina DSM 19592]
Length = 569
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 43/73 (58%), Gaps = 3/73 (4%)
Query: 79 KVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFT 138
K+ +SI+ +G V G NT+A KA+ + KGG + +P G+WLTG L SN
Sbjct: 56 KLTVSIEKYGAVAGGLEKNTQAIEKAISEV---SKKGGGTVKIPRGIWLTGPITLKSNIN 112
Query: 139 LFLERGAVMLGSQ 151
L LE GA++L S+
Sbjct: 113 LHLEDGALLLFSK 125
>gi|326797905|ref|YP_004315724.1| glycoside hydrolase [Sphingobacterium sp. 21]
gi|326548669|gb|ADZ77054.1| glycoside hydrolase family 28 [Sphingobacterium sp. 21]
Length = 485
Score = 59.3 bits (142), Expect = 6e-07, Method: Composition-based stats.
Identities = 34/77 (44%), Positives = 44/77 (57%), Gaps = 5/77 (6%)
Query: 75 LPERKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLT 134
PER I DFG VGDG T NTEAF+KA+ + + GG ++ VP G +LTG L
Sbjct: 63 FPERDFL--ITDFGAVGDGLTKNTEAFKKAI---EACHNNGGGRVVVPYGKFLTGGIYLK 117
Query: 135 SNFTLFLERGAVMLGSQ 151
SN L L A ++ S+
Sbjct: 118 SNVNLHLADSATIVFSR 134
>gi|227537592|ref|ZP_03967641.1| glycoside hydrolase [Sphingobacterium spiritivorum ATCC 33300]
gi|227242594|gb|EEI92609.1| glycoside hydrolase [Sphingobacterium spiritivorum ATCC 33300]
Length = 473
Score = 58.9 bits (141), Expect = 6e-07, Method: Composition-based stats.
Identities = 31/69 (44%), Positives = 41/69 (59%), Gaps = 3/69 (4%)
Query: 83 SIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFLE 142
+I DFG GDG T NTEAFR A+ +GG ++ VP G++LTG+ L SN L L
Sbjct: 57 NIADFGAKGDGVTKNTEAFRLAIEKCHA---EGGGRVVVPHGVFLTGAIYLKSNVNLHLT 113
Query: 143 RGAVMLGSQ 151
G +L S+
Sbjct: 114 DGTTILFSR 122
>gi|300770984|ref|ZP_07080861.1| glycoside hydrolase [Sphingobacterium spiritivorum ATCC 33861]
gi|300762257|gb|EFK59076.1| glycoside hydrolase [Sphingobacterium spiritivorum ATCC 33861]
Length = 473
Score = 58.9 bits (141), Expect = 7e-07, Method: Composition-based stats.
Identities = 31/69 (44%), Positives = 41/69 (59%), Gaps = 3/69 (4%)
Query: 83 SIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFLE 142
+I DFG GDG T NTEAFR A+ +GG ++ VP G++LTG+ L SN L L
Sbjct: 57 NIADFGAKGDGVTKNTEAFRLAIEKCHA---EGGGRVVVPNGVFLTGAIYLKSNVNLHLT 113
Query: 143 RGAVMLGSQ 151
G +L S+
Sbjct: 114 DGTTILFSR 122
>gi|224538252|ref|ZP_03678791.1| hypothetical protein BACCELL_03143 [Bacteroides cellulosilyticus
DSM 14838]
gi|423221595|ref|ZP_17208065.1| hypothetical protein HMPREF1062_00251 [Bacteroides cellulosilyticus
CL02T12C19]
gi|224520112|gb|EEF89217.1| hypothetical protein BACCELL_03143 [Bacteroides cellulosilyticus
DSM 14838]
gi|392645922|gb|EIY39642.1| hypothetical protein HMPREF1062_00251 [Bacteroides cellulosilyticus
CL02T12C19]
Length = 534
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 41/67 (61%), Gaps = 3/67 (4%)
Query: 82 MSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFL 141
++I DFG GDG NT+A A++ + KGG ++ +PEGLWLTG L SN L+
Sbjct: 58 VNIVDFGAKGDGIVLNTKAINDAIKAVNA---KGGGKVIIPEGLWLTGPIELLSNVNLYT 114
Query: 142 ERGAVML 148
E A++L
Sbjct: 115 EMNALVL 121
>gi|317475267|ref|ZP_07934533.1| exo-poly-alpha-D-galacturonosidase [Bacteroides eggerthii
1_2_48FAA]
gi|316908521|gb|EFV30209.1| exo-poly-alpha-D-galacturonosidase [Bacteroides eggerthii
1_2_48FAA]
Length = 533
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 43/70 (61%), Gaps = 3/70 (4%)
Query: 82 MSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFL 141
++I FG GDG T NT+A A++ + KGG ++ +PEGLWLTG L SN L+
Sbjct: 58 VNILQFGAKGDGITLNTKAINDAIKAVNA---KGGGKVVIPEGLWLTGPIELLSNVNLYT 114
Query: 142 ERGAVMLGSQ 151
E+ A+++ S
Sbjct: 115 EKNALIVFSD 124
>gi|238006852|gb|ACR34461.1| unknown [Zea mays]
Length = 187
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 38/77 (49%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 76 PERKVAMSIKDFGGVGDGTTSNT-EAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLT 134
P R MS+ FG GDG T NT R R + G +GG L VP G+WLTG FNLT
Sbjct: 38 PRRGAWMSVASFGARGDGQTLNTGAFARAVARIARRRGARGGTLLYVPPGVWLTGPFNLT 97
Query: 135 SNFTLFLERGAVMLGSQ 151
S+ TLFL RGA++ +Q
Sbjct: 98 SHMTLFLARGAIVRATQ 114
>gi|218129299|ref|ZP_03458103.1| hypothetical protein BACEGG_00876 [Bacteroides eggerthii DSM 20697]
gi|217988476|gb|EEC54797.1| polygalacturonase (pectinase) [Bacteroides eggerthii DSM 20697]
Length = 533
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 43/70 (61%), Gaps = 3/70 (4%)
Query: 82 MSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFL 141
++I FG GDG T NT+A A++ + KGG ++ +PEGLWLTG L SN L+
Sbjct: 58 VNILQFGAKGDGITLNTKAINDAIKAVNA---KGGGKVVIPEGLWLTGPIELLSNVNLYT 114
Query: 142 ERGAVMLGSQ 151
E+ A+++ S
Sbjct: 115 EKNALIVFSD 124
>gi|399032129|ref|ZP_10731768.1| endopolygalacturonase [Flavobacterium sp. CF136]
gi|398069540|gb|EJL60890.1| endopolygalacturonase [Flavobacterium sp. CF136]
Length = 479
Score = 58.5 bits (140), Expect = 1e-06, Method: Composition-based stats.
Identities = 33/79 (41%), Positives = 48/79 (60%), Gaps = 6/79 (7%)
Query: 75 LPERKVA---MSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSF 131
+P+ K + +IKD+G V DGTT NT AF KA++ + GG ++ VP G +LTG+
Sbjct: 48 IPQTKFSDKSYNIKDYGAVADGTTLNTGAFEKAIKEC---AENGGGKVIVPNGKYLTGAI 104
Query: 132 NLTSNFTLFLERGAVMLGS 150
+L SN L L+ A +L S
Sbjct: 105 HLESNVNLHLDDNAEILFS 123
>gi|311748289|ref|ZP_07722074.1| exo-poly-alpha-D-galacturonosidase [Algoriphagus sp. PR1]
gi|126576785|gb|EAZ81033.1| exo-poly-alpha-D-galacturonosidase [Algoriphagus sp. PR1]
Length = 557
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 45/69 (65%), Gaps = 3/69 (4%)
Query: 83 SIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFLE 142
SI ++G VGDG T+N++AF+ A+ + ++GG ++ VP G+WLTG L N L LE
Sbjct: 52 SIMEYGAVGDGLTNNSQAFKAAIEEVS---NQGGGKVLVPRGIWLTGPITLLDNVNLHLE 108
Query: 143 RGAVMLGSQ 151
G+++ S+
Sbjct: 109 DGSLITFSK 117
>gi|329956221|ref|ZP_08296901.1| polygalacturonase [Bacteroides clarus YIT 12056]
gi|328524695|gb|EGF51756.1| polygalacturonase [Bacteroides clarus YIT 12056]
Length = 506
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 45/76 (59%), Gaps = 5/76 (6%)
Query: 75 LPERKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLT 134
P+R V ++ +F VG+G T T AF A+ + ++GG L VP G+WLTG L
Sbjct: 45 FPDRTVNLA--EFNAVGNGETLCTSAFADAINTLS---EQGGGHLVVPAGVWLTGPIVLK 99
Query: 135 SNFTLFLERGAVMLGS 150
SN L LE+GAV+L S
Sbjct: 100 SNIDLHLEKGAVILFS 115
>gi|212693553|ref|ZP_03301681.1| hypothetical protein BACDOR_03070 [Bacteroides dorei DSM 17855]
gi|212663806|gb|EEB24380.1| polygalacturonase (pectinase) [Bacteroides dorei DSM 17855]
Length = 539
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 43/68 (63%), Gaps = 3/68 (4%)
Query: 81 AMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLF 140
+++I DFG DG T NT+A A++ + KGG ++ +PEGLWLTG L SN L+
Sbjct: 60 SVNIIDFGAKPDGITLNTKAINDAIQQVNA---KGGGKVIIPEGLWLTGPIELLSNVNLY 116
Query: 141 LERGAVML 148
E+ +++L
Sbjct: 117 TEKNSLVL 124
>gi|238005826|gb|ACR33948.1| unknown [Zea mays]
Length = 256
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/77 (49%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 76 PERKVAMSIKDFGGVGDGTTSNT-EAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLT 134
P R MS+ FG GDG T NT R R + G +GG L VP G+WLTG FNLT
Sbjct: 38 PRRGAWMSVASFGARGDGQTLNTGAFARAVARIARRRGARGGTLLYVPPGVWLTGPFNLT 97
Query: 135 SNFTLFLERGAVMLGSQ 151
S+ TLFL RGA++ +Q
Sbjct: 98 SHMTLFLARGAIVRATQ 114
>gi|329962420|ref|ZP_08300420.1| polygalacturonase [Bacteroides fluxus YIT 12057]
gi|328529976|gb|EGF56864.1| polygalacturonase [Bacteroides fluxus YIT 12057]
Length = 532
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 43/74 (58%), Gaps = 5/74 (6%)
Query: 75 LPERKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLT 134
PE V +I DFGG DG NT+A A++ + G G ++ +PEG+WLTG L
Sbjct: 53 FPEYSV--NIVDFGGKNDGVALNTQAINDAIKAVNAHG---GGKVIIPEGIWLTGPIELL 107
Query: 135 SNFTLFLERGAVML 148
SN L+ E+ A+++
Sbjct: 108 SNVNLYTEKNALVV 121
>gi|298383858|ref|ZP_06993419.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. 1_1_14]
gi|298263462|gb|EFI06325.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. 1_1_14]
Length = 538
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 41/67 (61%), Gaps = 3/67 (4%)
Query: 82 MSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFL 141
++I FG GDG T NT+A A++ + +GG ++ +PEG WLTG L SN L+
Sbjct: 59 VNISKFGAKGDGMTLNTKAINDAIKEVN---QRGGGKVIIPEGTWLTGPIELLSNVNLYT 115
Query: 142 ERGAVML 148
ER A++L
Sbjct: 116 ERNALIL 122
>gi|218134189|ref|ZP_03462993.1| hypothetical protein BACPEC_02079 [[Bacteroides] pectinophilus ATCC
43243]
gi|217991564|gb|EEC57570.1| polygalacturonase (pectinase) [[Bacteroides] pectinophilus ATCC
43243]
Length = 480
Score = 58.2 bits (139), Expect = 1e-06, Method: Composition-based stats.
Identities = 28/71 (39%), Positives = 40/71 (56%), Gaps = 3/71 (4%)
Query: 78 RKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNF 137
R+ I+D+G V G SNTEA A+R ++GG + VP GLWLTG + +
Sbjct: 19 REAQYDIRDYGAVAGGRVSNTEAINAAIRTCS---EEGGGHVIVPSGLWLTGPVRILTGV 75
Query: 138 TLFLERGAVML 148
L +E GAV++
Sbjct: 76 DLHVENGAVLM 86
>gi|29349595|ref|NP_813098.1| exo-poly-alpha-D-galacturonosidase [Bacteroides thetaiotaomicron
VPI-5482]
gi|29341505|gb|AAO79292.1| exo-poly-alpha-D-galacturonosidase precursor [Bacteroides
thetaiotaomicron VPI-5482]
Length = 538
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 41/67 (61%), Gaps = 3/67 (4%)
Query: 82 MSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFL 141
++I FG GDG T NT+A A++ + +GG ++ +PEG WLTG L SN L+
Sbjct: 59 VNISKFGAKGDGMTLNTKAINDAIKEVN---QRGGGKVIIPEGTWLTGPIELLSNVNLYT 115
Query: 142 ERGAVML 148
ER A++L
Sbjct: 116 ERNALIL 122
>gi|312621274|ref|YP_004022887.1| glycoside hydrolase family 28 [Caldicellulosiruptor kronotskyensis
2002]
gi|312201741|gb|ADQ45068.1| glycoside hydrolase family 28 [Caldicellulosiruptor kronotskyensis
2002]
Length = 447
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 43/69 (62%), Gaps = 3/69 (4%)
Query: 83 SIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFLE 142
++ DFG G+G +TEAF+KA+ + GG + VP G++ G+ +L SN TL++E
Sbjct: 4 NVCDFGAKGNGVDKDTEAFKKAIEVCE---KNGGGTVYVPAGIYHVGALHLKSNMTLYIE 60
Query: 143 RGAVMLGSQ 151
GAV+ SQ
Sbjct: 61 SGAVLKFSQ 69
>gi|325298782|ref|YP_004258699.1| Polygalacturonase [Bacteroides salanitronis DSM 18170]
gi|324318335|gb|ADY36226.1| Polygalacturonase [Bacteroides salanitronis DSM 18170]
Length = 535
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 38/66 (57%), Gaps = 3/66 (4%)
Query: 83 SIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFLE 142
SI +FG V DG T NTEAF + + +GG + VP GLWLTG L SN L LE
Sbjct: 60 SITEFGAVADGITLNTEAFAQTI---DAVSQQGGGTVVVPAGLWLTGPIVLKSNINLHLE 116
Query: 143 RGAVML 148
A++L
Sbjct: 117 ENALVL 122
>gi|427387085|ref|ZP_18883141.1| hypothetical protein HMPREF9447_04174 [Bacteroides oleiciplenus YIT
12058]
gi|425725690|gb|EKU88559.1| hypothetical protein HMPREF9447_04174 [Bacteroides oleiciplenus YIT
12058]
Length = 534
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 41/67 (61%), Gaps = 3/67 (4%)
Query: 82 MSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFL 141
+SI +FG GDG NT+A A++ + KGG ++ +PEGLWLTG L SN L+
Sbjct: 58 VSIVEFGAKGDGIMLNTKAINDAIKAVNA---KGGGKVVIPEGLWLTGPIELLSNVNLYT 114
Query: 142 ERGAVML 148
E A++L
Sbjct: 115 EMNALIL 121
>gi|302755730|ref|XP_002961289.1| hypothetical protein SELMODRAFT_437695 [Selaginella moellendorffii]
gi|300172228|gb|EFJ38828.1| hypothetical protein SELMODRAFT_437695 [Selaginella moellendorffii]
Length = 474
Score = 57.8 bits (138), Expect = 1e-06, Method: Composition-based stats.
Identities = 29/77 (37%), Positives = 48/77 (62%), Gaps = 2/77 (2%)
Query: 76 PERKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQ--LNVPEGLWLTGSFNL 133
P R V +++D+G +G+G+T T + + A+ +K G++ + VP G +LTG+ L
Sbjct: 30 PSRPVQCNVRDYGALGNGSTLETSSIQSAINACHSRSNKLGSKSVVWVPPGSYLTGTLFL 89
Query: 134 TSNFTLFLERGAVMLGS 150
SN TL ++RGA +LGS
Sbjct: 90 RSNMTLHIDRGAKILGS 106
>gi|383120529|ref|ZP_09941257.1| hypothetical protein BSIG_2461 [Bacteroides sp. 1_1_6]
gi|382985024|gb|EES68500.2| hypothetical protein BSIG_2461 [Bacteroides sp. 1_1_6]
Length = 535
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 41/67 (61%), Gaps = 3/67 (4%)
Query: 82 MSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFL 141
++I FG GDG T NT+A A++ + +GG ++ +PEG WLTG L SN L+
Sbjct: 56 VNISKFGAKGDGMTLNTKAINDAIKEVN---QRGGGKVIIPEGTWLTGPIELLSNVNLYT 112
Query: 142 ERGAVML 148
ER A++L
Sbjct: 113 ERNALIL 119
>gi|380693930|ref|ZP_09858789.1| exo-poly-alpha-D-galacturonosidase [Bacteroides faecis MAJ27]
Length = 528
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 41/67 (61%), Gaps = 3/67 (4%)
Query: 82 MSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFL 141
++I FG GDG T NT+A A++ + +GG ++ +PEG WLTG L SN L+
Sbjct: 49 VNISKFGAKGDGMTLNTKAINDAIKEVN---QRGGGKVIIPEGTWLTGPIELLSNVNLYT 105
Query: 142 ERGAVML 148
ER A++L
Sbjct: 106 ERNALVL 112
>gi|116623935|ref|YP_826091.1| glycoside hydrolase family protein [Candidatus Solibacter usitatus
Ellin6076]
gi|116227097|gb|ABJ85806.1| glycoside hydrolase, family 28 [Candidatus Solibacter usitatus
Ellin6076]
Length = 523
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/69 (44%), Positives = 37/69 (53%), Gaps = 3/69 (4%)
Query: 82 MSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFL 141
+ I FG GDG T N +A KA+ GG + P G WLTGS L SN TL L
Sbjct: 23 VDITTFGAKGDGKTQNRDAINKAIETAAA---AGGGTVEFPAGTWLTGSLRLRSNVTLHL 79
Query: 142 ERGAVMLGS 150
+RGAV+ S
Sbjct: 80 DRGAVIEAS 88
>gi|167764884|ref|ZP_02437005.1| hypothetical protein BACSTE_03276 [Bacteroides stercoris ATCC
43183]
gi|167697553|gb|EDS14132.1| polygalacturonase (pectinase) [Bacteroides stercoris ATCC 43183]
Length = 550
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 41/67 (61%), Gaps = 3/67 (4%)
Query: 82 MSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFL 141
+SI FG DGTT NT+A A++ + KGG ++ +PEGLWLTG L SN L
Sbjct: 76 VSILQFGAKSDGTTLNTKAINDAIKAVNA---KGGGKVVIPEGLWLTGPIELLSNVNLHT 132
Query: 142 ERGAVML 148
E+ A+++
Sbjct: 133 EKNALVV 139
>gi|255531611|ref|YP_003091983.1| glycoside hydrolase family protein [Pedobacter heparinus DSM 2366]
gi|255344595|gb|ACU03921.1| glycoside hydrolase family 28 [Pedobacter heparinus DSM 2366]
Length = 518
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 42/68 (61%), Gaps = 3/68 (4%)
Query: 83 SIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFLE 142
+I +G +GDGTT NTEA +KA+ GG ++ PEG +L+G+ L N T+ E
Sbjct: 29 NILKYGAIGDGTTLNTEAIQKAI---DACYQSGGGKVIFPEGRFLSGTIVLKDNITIHFE 85
Query: 143 RGAVMLGS 150
R AV+LGS
Sbjct: 86 RNAVLLGS 93
>gi|312794141|ref|YP_004027064.1| glycoside hydrolase family 28 [Caldicellulosiruptor kristjanssonii
177R1B]
gi|312181281|gb|ADQ41451.1| glycoside hydrolase family 28 [Caldicellulosiruptor kristjanssonii
177R1B]
Length = 447
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 46/70 (65%), Gaps = 3/70 (4%)
Query: 82 MSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFL 141
+++++FG G+G +TEAF+KA+ + +GG + VP G++ G+ +L SN TL++
Sbjct: 3 VNVREFGAKGNGIDKDTEAFKKAIEECE---KQGGGTIFVPAGIYHIGAIHLKSNMTLYI 59
Query: 142 ERGAVMLGSQ 151
E GAV+ SQ
Sbjct: 60 ESGAVLKFSQ 69
>gi|393786780|ref|ZP_10374912.1| hypothetical protein HMPREF1068_01192 [Bacteroides nordii
CL02T12C05]
gi|392658015|gb|EIY51645.1| hypothetical protein HMPREF1068_01192 [Bacteroides nordii
CL02T12C05]
Length = 536
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 41/67 (61%), Gaps = 3/67 (4%)
Query: 82 MSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFL 141
+SI FG DG NT+A +A++ + KGG ++ +PEGLWLTG L SN L+
Sbjct: 57 ISIVAFGAQNDGKFLNTKAINEAIKAVHA---KGGGKVVIPEGLWLTGPIELLSNVNLYT 113
Query: 142 ERGAVML 148
ER A++L
Sbjct: 114 ERNAMIL 120
>gi|344995681|ref|YP_004798024.1| glycoside hydrolase family protein [Caldicellulosiruptor
lactoaceticus 6A]
gi|343963900|gb|AEM73047.1| glycoside hydrolase family 28 [Caldicellulosiruptor lactoaceticus
6A]
Length = 443
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 46/70 (65%), Gaps = 3/70 (4%)
Query: 82 MSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFL 141
+++++FG G+G +TEAF+KA+ + +GG + VP G++ G+ +L SN TL++
Sbjct: 3 VNVREFGAKGNGIDKDTEAFKKAIEECE---KQGGGTIFVPAGIYHIGAIHLKSNMTLYI 59
Query: 142 ERGAVMLGSQ 151
E GAV+ SQ
Sbjct: 60 ESGAVLKFSQ 69
>gi|312126393|ref|YP_003991267.1| glycoside hydrolase family 28 [Caldicellulosiruptor hydrothermalis
108]
gi|311776412|gb|ADQ05898.1| glycoside hydrolase family 28 [Caldicellulosiruptor hydrothermalis
108]
Length = 447
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 46/70 (65%), Gaps = 3/70 (4%)
Query: 82 MSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFL 141
+++++FG G+G +TEAF+KA+ + +GG + VP G++ G+ +L SN TL++
Sbjct: 3 VNVREFGAKGNGIDKDTEAFKKAIEECE---KQGGGTIFVPAGIYHIGAIHLKSNMTLYI 59
Query: 142 ERGAVMLGSQ 151
E GAV+ SQ
Sbjct: 60 ESGAVLKFSQ 69
>gi|431798423|ref|YP_007225327.1| endopolygalacturonase [Echinicola vietnamensis DSM 17526]
gi|430789188|gb|AGA79317.1| endopolygalacturonase [Echinicola vietnamensis DSM 17526]
Length = 565
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 45/77 (58%), Gaps = 5/77 (6%)
Query: 75 LPERKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLT 134
P+ +V +I +G VG+G NT AF KA+ + GG ++ VP G+WLTG L
Sbjct: 50 FPDHEV--NITAYGAVGNGIEKNTAAFAKAIDEV---AQAGGGRVIVPRGIWLTGPVTLQ 104
Query: 135 SNFTLFLERGAVMLGSQ 151
SN L LE GA++L S+
Sbjct: 105 SNINLHLEEGALVLFSR 121
>gi|226509250|ref|NP_001149385.1| LOC100283011 precursor [Zea mays]
gi|195626846|gb|ACG35253.1| polygalacturonase [Zea mays]
Length = 446
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/77 (49%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 76 PERKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQL-NVPEGLWLTGSFNLT 134
P R MS+ FG GDG T NT AF +AV + G L VP G+WLTG FNLT
Sbjct: 38 PRRGAWMSVASFGARGDGQTLNTGAFARAVARIARRRGARGGTLLYVPPGVWLTGPFNLT 97
Query: 135 SNFTLFLERGAVMLGSQ 151
S+ TLFL RGA++ +Q
Sbjct: 98 SHMTLFLARGAIVRATQ 114
>gi|325300385|ref|YP_004260302.1| glycoside hydrolase family protein [Bacteroides salanitronis DSM
18170]
gi|324319938|gb|ADY37829.1| glycoside hydrolase family 28 [Bacteroides salanitronis DSM 18170]
Length = 513
Score = 57.4 bits (137), Expect = 2e-06, Method: Composition-based stats.
Identities = 31/69 (44%), Positives = 39/69 (56%), Gaps = 3/69 (4%)
Query: 82 MSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFL 141
+ + G VGDG T NT + + A+ G +GG L P G +LTGS L S TL L
Sbjct: 25 LDVTRHGAVGDGKTLNTGSLQGAI---DGLHARGGGVLRFPAGRYLTGSLRLKSGVTLHL 81
Query: 142 ERGAVMLGS 150
E GAV+LGS
Sbjct: 82 EEGAVLLGS 90
>gi|413948635|gb|AFW81284.1| hypothetical protein ZEAMMB73_960645 [Zea mays]
Length = 458
Score = 57.0 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 38/77 (49%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 76 PERKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQL-NVPEGLWLTGSFNLT 134
P R MS+ FG GDG T NT AF +AV + G L VP G+WLTG FNLT
Sbjct: 38 PRRGAWMSVASFGARGDGQTLNTGAFARAVARIARRRGARGGTLLYVPPGVWLTGPFNLT 97
Query: 135 SNFTLFLERGAVMLGSQ 151
S+ TLFL RGA++ +Q
Sbjct: 98 SHMTLFLARGAIVRATQ 114
>gi|354603313|ref|ZP_09021312.1| hypothetical protein HMPREF9450_00227 [Alistipes indistinctus YIT
12060]
gi|353349190|gb|EHB93456.1| hypothetical protein HMPREF9450_00227 [Alistipes indistinctus YIT
12060]
Length = 497
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/68 (47%), Positives = 41/68 (60%), Gaps = 3/68 (4%)
Query: 83 SIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFLE 142
+ DFG DG T NT A ++A+ ++GG +L G +LTGS L SN TL LE
Sbjct: 26 QVSDFGAKADGITLNTGAIQRAI---DAVNERGGGRLVFGPGKYLTGSIYLKSNVTLHLE 82
Query: 143 RGAVMLGS 150
RGAV+LGS
Sbjct: 83 RGAVLLGS 90
>gi|261406667|ref|YP_003242908.1| glycoside hydrolase family protein [Paenibacillus sp. Y412MC10]
gi|261283130|gb|ACX65101.1| glycoside hydrolase family 28 [Paenibacillus sp. Y412MC10]
Length = 523
Score = 57.0 bits (136), Expect = 3e-06, Method: Composition-based stats.
Identities = 30/77 (38%), Positives = 42/77 (54%), Gaps = 5/77 (6%)
Query: 75 LPERKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLT 134
+PE V +I D+G VGDG NT+AF +A+ + GG L +P G+WLTG L
Sbjct: 16 IPEHTV--TITDYGAVGDGVYDNTQAFHQAI---EACAKAGGGTLVIPPGIWLTGPIKLQ 70
Query: 135 SNFTLFLERGAVMLGSQ 151
S L GA ++ S+
Sbjct: 71 SRIELHASAGAFVMFSK 87
>gi|372275542|ref|ZP_09511578.1| polygalacturonase [Pantoea sp. SL1_M5]
Length = 443
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 40/70 (57%), Gaps = 3/70 (4%)
Query: 82 MSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFL 141
+S+ DF V DG T +T ++A M GG +L +P G + +G NL S+F L L
Sbjct: 3 LSLADFHPVADGETPDTAVLQRA---MDQIAAAGGGRLTLPAGRYRSGCLNLPSDFELHL 59
Query: 142 ERGAVMLGSQ 151
E GAV++ SQ
Sbjct: 60 EAGAVLIASQ 69
>gi|408369543|ref|ZP_11167324.1| glycoside hydrolase [Galbibacter sp. ck-I2-15]
gi|407745289|gb|EKF56855.1| glycoside hydrolase [Galbibacter sp. ck-I2-15]
Length = 466
Score = 57.0 bits (136), Expect = 3e-06, Method: Composition-based stats.
Identities = 28/63 (44%), Positives = 40/63 (63%), Gaps = 3/63 (4%)
Query: 83 SIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFLE 142
SI D+G VGDGTT NT+A + A+ Q + GG ++ +P G +LTG +L SN L LE
Sbjct: 50 SIMDYGAVGDGTTDNTQAIKDAI---QACVEAGGGKVVIPAGKFLTGPIHLKSNVNLHLE 106
Query: 143 RGA 145
+ +
Sbjct: 107 KNS 109
>gi|390437171|ref|ZP_10225709.1| polygalacturonase [Pantoea agglomerans IG1]
Length = 443
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 40/70 (57%), Gaps = 3/70 (4%)
Query: 82 MSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFL 141
+S+ DF V DG T +T ++A M GG +L +P G + +G NL S+F L L
Sbjct: 3 LSLADFHPVADGETPDTAVLQRA---MDQIAAAGGGRLTLPAGRYRSGCLNLPSDFELHL 59
Query: 142 ERGAVMLGSQ 151
E GAV++ SQ
Sbjct: 60 EAGAVLIASQ 69
>gi|413950434|gb|AFW83083.1| hypothetical protein ZEAMMB73_863996 [Zea mays]
Length = 472
Score = 56.6 bits (135), Expect = 3e-06, Method: Composition-based stats.
Identities = 32/51 (62%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 97 NTEAFRKAVRYMQGFGDKGGAQ-LNVPEGLWLTGSFNLTSNFTLFLERGAV 146
NT AFR+AV + GG L+VP G WLTGSFNLTS FTLFL RGAV
Sbjct: 3 NTAAFRRAVAELGARAAGGGGARLDVPPGRWLTGSFNLTSRFTLFLHRGAV 53
>gi|146301851|ref|YP_001196442.1| glycoside hydrolase [Flavobacterium johnsoniae UW101]
gi|146156269|gb|ABQ07123.1| Polygalacturonase-like protein; Glycoside hydrolase family 28
[Flavobacterium johnsoniae UW101]
Length = 560
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 41/69 (59%), Gaps = 3/69 (4%)
Query: 79 KVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFT 138
K +++IKDFG V G NT+AF A+ KGG ++ +P G+WLTG L SN
Sbjct: 50 KNSVNIKDFGAVNGGYVLNTKAFADAI---DAVSKKGGGKVIIPPGIWLTGPIILKSNIE 106
Query: 139 LFLERGAVM 147
L ERGA++
Sbjct: 107 LHAERGALI 115
>gi|374375482|ref|ZP_09633140.1| glycoside hydrolase family 28 [Niabella soli DSM 19437]
gi|373232322|gb|EHP52117.1| glycoside hydrolase family 28 [Niabella soli DSM 19437]
Length = 493
Score = 56.6 bits (135), Expect = 3e-06, Method: Composition-based stats.
Identities = 30/68 (44%), Positives = 40/68 (58%), Gaps = 3/68 (4%)
Query: 83 SIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFLE 142
+I DFG DG T N+ + A+ Y+ GG +L EG +LTG+ L SN TL LE
Sbjct: 25 NIMDFGAKADGVTLNSAIIQHAIDYIT---QNGGGRLVFKEGRYLTGTIFLKSNVTLHLE 81
Query: 143 RGAVMLGS 150
+GAV+ GS
Sbjct: 82 KGAVLFGS 89
>gi|427385171|ref|ZP_18881676.1| hypothetical protein HMPREF9447_02709 [Bacteroides oleiciplenus YIT
12058]
gi|425727339|gb|EKU90199.1| hypothetical protein HMPREF9447_02709 [Bacteroides oleiciplenus YIT
12058]
Length = 495
Score = 56.6 bits (135), Expect = 3e-06, Method: Composition-based stats.
Identities = 35/86 (40%), Positives = 44/86 (51%), Gaps = 11/86 (12%)
Query: 65 CAAGLLGDQYLPERKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEG 124
C G+ G Y SI DFG DG T NT + A+ Y+ GG +L G
Sbjct: 16 CWTGVRGQDY--------SIMDFGAKPDGVTLNTHTIQYAIDYIH---TAGGGKLIFDTG 64
Query: 125 LWLTGSFNLTSNFTLFLERGAVMLGS 150
+LTG+ L SN TL L +GAV+LGS
Sbjct: 65 NYLTGTIYLKSNVTLHLAQGAVLLGS 90
>gi|302803023|ref|XP_002983265.1| hypothetical protein SELMODRAFT_155743 [Selaginella moellendorffii]
gi|300148950|gb|EFJ15607.1| hypothetical protein SELMODRAFT_155743 [Selaginella moellendorffii]
Length = 472
Score = 56.2 bits (134), Expect = 4e-06, Method: Composition-based stats.
Identities = 28/78 (35%), Positives = 48/78 (61%), Gaps = 2/78 (2%)
Query: 75 LPERKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQ--LNVPEGLWLTGSFN 132
+P R V +++D+G +G+G+T T + + A+ +K G++ + VP G +LTG+
Sbjct: 27 IPSRPVQCNVRDYGALGNGSTLETSSIQSAINACHSRSNKLGSKSVVWVPPGSYLTGTLF 86
Query: 133 LTSNFTLFLERGAVMLGS 150
L SN TL ++ GA +LGS
Sbjct: 87 LRSNMTLHIDHGAKILGS 104
>gi|395803621|ref|ZP_10482865.1| glycoside hydrolase [Flavobacterium sp. F52]
gi|395434175|gb|EJG00125.1| glycoside hydrolase [Flavobacterium sp. F52]
Length = 553
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 39/66 (59%), Gaps = 3/66 (4%)
Query: 82 MSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFL 141
+++KDFG V G NT+AF A+ KGG +L +P G+WLTG L SN L
Sbjct: 51 VNLKDFGAVNGGYVLNTKAFADAI---DALSKKGGGKLIIPPGIWLTGPIILKSNIELHA 107
Query: 142 ERGAVM 147
ERGA++
Sbjct: 108 ERGALI 113
>gi|23099543|ref|NP_693009.1| hypothetical protein OB2088 [Oceanobacillus iheyensis HTE831]
gi|22777773|dbj|BAC14044.1| hypothetical conserved protein [Oceanobacillus iheyensis HTE831]
Length = 495
Score = 56.2 bits (134), Expect = 4e-06, Method: Composition-based stats.
Identities = 26/66 (39%), Positives = 39/66 (59%), Gaps = 3/66 (4%)
Query: 83 SIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFLE 142
+I +FG GD T NTE+ A++ D GG L +P G +LTG +L SN T+++E
Sbjct: 4 NITEFGAKGDSNTDNTESISSAIKRC---ADSGGGTLYIPAGTYLTGPISLISNLTIYIE 60
Query: 143 RGAVML 148
GA ++
Sbjct: 61 SGAKLV 66
>gi|302872741|ref|YP_003841377.1| polygalacturonase [Caldicellulosiruptor obsidiansis OB47]
gi|302575600|gb|ADL43391.1| Polygalacturonase [Caldicellulosiruptor obsidiansis OB47]
Length = 447
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 45/72 (62%), Gaps = 3/72 (4%)
Query: 80 VAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTL 139
+ +++ +FG G+G +TEAF++A+ + GG + VP G++ TG +L SN TL
Sbjct: 1 MVVNVVEFGAKGNGIDKDTEAFKRAI---EACEKHGGGTIFVPAGIYHTGPIHLKSNMTL 57
Query: 140 FLERGAVMLGSQ 151
++E GAV+ SQ
Sbjct: 58 YIENGAVLKFSQ 69
>gi|386819253|ref|ZP_10106469.1| endopolygalacturonase [Joostella marina DSM 19592]
gi|386424359|gb|EIJ38189.1| endopolygalacturonase [Joostella marina DSM 19592]
Length = 468
Score = 56.2 bits (134), Expect = 5e-06, Method: Composition-based stats.
Identities = 27/66 (40%), Positives = 42/66 (63%), Gaps = 3/66 (4%)
Query: 83 SIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFLE 142
+IKD+G V DG T+N++A + A++ D GG ++ VP+G ++TG +L SN LE
Sbjct: 52 NIKDYGAVNDGETNNSKAIKDAIK---ACNDAGGGKVIVPKGKYVTGPIHLLSNVNFHLE 108
Query: 143 RGAVML 148
GA +L
Sbjct: 109 EGAEIL 114
>gi|146301992|ref|YP_001196583.1| glycoside hydrolase [Flavobacterium johnsoniae UW101]
gi|146156410|gb|ABQ07264.1| Candidate polygalacturonase; Glycoside hydrolase family 28
[Flavobacterium johnsoniae UW101]
Length = 475
Score = 56.2 bits (134), Expect = 5e-06, Method: Composition-based stats.
Identities = 31/68 (45%), Positives = 41/68 (60%), Gaps = 3/68 (4%)
Query: 83 SIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFLE 142
+I DFG V DG T NT AF KA+ Q + GG ++ VP G +LTG+ +L +N L LE
Sbjct: 59 NINDFGAVADGKTLNTAAFEKAI---QTCTENGGGKVLVPNGKYLTGAIHLENNVNLHLE 115
Query: 143 RGAVMLGS 150
A +L S
Sbjct: 116 DKAEILFS 123
>gi|379720205|ref|YP_005312336.1| hypothetical protein PM3016_2299 [Paenibacillus mucilaginosus 3016]
gi|378568877|gb|AFC29187.1| hypothetical protein PM3016_2299 [Paenibacillus mucilaginosus 3016]
Length = 518
Score = 55.8 bits (133), Expect = 5e-06, Method: Composition-based stats.
Identities = 33/95 (34%), Positives = 50/95 (52%), Gaps = 14/95 (14%)
Query: 65 CAAGLLGDQYLPERKVAMS---------IKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKG 115
C+ G+ P K+ +S I +FG V DG T NTEA + A+
Sbjct: 75 CSVSQSGEISQPSDKIKVSTRGQADRFDITEFGAVADGQTINTEAIQAAIDAC-----TA 129
Query: 116 GAQLNVPEGLWLTGSFNLTSNFTLFLERGAVMLGS 150
G ++ VP+G ++TG+ L S TL++E+G V+LGS
Sbjct: 130 GGKVVVPKGTFVTGAIFLKSRMTLYVEQGGVLLGS 164
>gi|386722797|ref|YP_006189123.1| hypothetical protein B2K_11610 [Paenibacillus mucilaginosus K02]
gi|384089922|gb|AFH61358.1| hypothetical protein B2K_11610 [Paenibacillus mucilaginosus K02]
Length = 518
Score = 55.8 bits (133), Expect = 5e-06, Method: Composition-based stats.
Identities = 33/95 (34%), Positives = 50/95 (52%), Gaps = 14/95 (14%)
Query: 65 CAAGLLGDQYLPERKVAMS---------IKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKG 115
C+ G+ P K+ +S I +FG V DG T NTEA + A+
Sbjct: 75 CSVSQSGEISQPSDKIKVSTRGQADRFDITEFGAVADGQTLNTEAIQAAIDAC-----TA 129
Query: 116 GAQLNVPEGLWLTGSFNLTSNFTLFLERGAVMLGS 150
G ++ VP+G ++TG+ L S TL++E+G V+LGS
Sbjct: 130 GGKVVVPKGTFVTGAIFLKSRMTLYVEQGGVLLGS 164
>gi|218129862|ref|ZP_03458666.1| hypothetical protein BACEGG_01443 [Bacteroides eggerthii DSM 20697]
gi|217987972|gb|EEC54297.1| polygalacturonase (pectinase) [Bacteroides eggerthii DSM 20697]
Length = 467
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 43/68 (63%), Gaps = 4/68 (5%)
Query: 83 SIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFLE 142
S+ DFG GDG T NT A ++ + +KGG + +P+G ++TG+ L SN TL LE
Sbjct: 23 SVSDFGARGDGKTVNTRAIQRVIDLC---AEKGGKVI-IPQGEFVTGTLFLKSNVTLRLE 78
Query: 143 RGAVMLGS 150
RGA +LGS
Sbjct: 79 RGAHLLGS 86
>gi|356499323|ref|XP_003518491.1| PREDICTED: LOW QUALITY PROTEIN: probable polygalacturonase-like
[Glycine max]
Length = 445
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 46/77 (59%), Gaps = 3/77 (3%)
Query: 75 LPERKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLT 134
L R +SI +F GVG+ T NT+ FR+A GG L VP G++LT +F+LT
Sbjct: 60 LGHRADNISITEFVGVGNERTLNTKTFREAFSTCHX---DGGTLLYVPPGVYLTETFHLT 116
Query: 135 SNFTLFLERGAVMLGSQ 151
S+ TL+L G +++ +Q
Sbjct: 117 SHRTLYLATGTIIMATQ 133
>gi|222530340|ref|YP_002574222.1| galacturan 1,4-alpha-galacturonidase [Caldicellulosiruptor bescii
DSM 6725]
gi|222457187|gb|ACM61449.1| Galacturan 1,4-alpha-galacturonidase [Caldicellulosiruptor bescii
DSM 6725]
Length = 447
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 43/69 (62%), Gaps = 3/69 (4%)
Query: 83 SIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFLE 142
++ +FG G+G +TEAF+KA+ + GG + VP G++ G+ +L SN TL++E
Sbjct: 4 NVCNFGAKGNGVDKDTEAFKKAIEVCE---KNGGGTVYVPAGIYHIGALHLKSNMTLYIE 60
Query: 143 RGAVMLGSQ 151
GAV+ SQ
Sbjct: 61 SGAVLKFSQ 69
>gi|317475804|ref|ZP_07935061.1| hypothetical protein HMPREF1016_02043 [Bacteroides eggerthii
1_2_48FAA]
gi|316907964|gb|EFV29661.1| hypothetical protein HMPREF1016_02043 [Bacteroides eggerthii
1_2_48FAA]
Length = 467
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 43/68 (63%), Gaps = 4/68 (5%)
Query: 83 SIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFLE 142
S+ DFG GDG T NT A ++ + +KGG + +P+G ++TG+ L SN TL LE
Sbjct: 23 SVSDFGARGDGKTVNTRAIQRVIDLC---AEKGGKVI-IPQGEFVTGTLFLKSNVTLRLE 78
Query: 143 RGAVMLGS 150
RGA +LGS
Sbjct: 79 RGAHLLGS 86
>gi|344995379|ref|YP_004797722.1| glycoside hydrolase family protein [Caldicellulosiruptor
lactoaceticus 6A]
gi|343963598|gb|AEM72745.1| glycoside hydrolase family 28 [Caldicellulosiruptor lactoaceticus
6A]
Length = 447
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 45/70 (64%), Gaps = 3/70 (4%)
Query: 82 MSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFL 141
+++++FG G+G TEAF+KA+ + +GG + VP G++ G+ +L SN TL++
Sbjct: 3 VNVREFGAKGNGIDKVTEAFKKAIEECE---KQGGGTIFVPAGIYHIGAIHLKSNMTLYI 59
Query: 142 ERGAVMLGSQ 151
E GAV+ SQ
Sbjct: 60 ESGAVLKFSQ 69
>gi|395803712|ref|ZP_10482956.1| glycoside hydrolase [Flavobacterium sp. F52]
gi|395434266|gb|EJG00216.1| glycoside hydrolase [Flavobacterium sp. F52]
Length = 492
Score = 55.8 bits (133), Expect = 6e-06, Method: Composition-based stats.
Identities = 32/68 (47%), Positives = 41/68 (60%), Gaps = 3/68 (4%)
Query: 83 SIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFLE 142
+I DFG V DG T NT AF+KA+ Q GG ++ VP G +LTG+ +L SN L LE
Sbjct: 72 NINDFGAVADGKTLNTLAFQKAI---QECAANGGGRVLVPNGKYLTGAIHLESNVNLHLE 128
Query: 143 RGAVMLGS 150
A +L S
Sbjct: 129 DHAEILFS 136
>gi|189468045|ref|ZP_03016830.1| hypothetical protein BACINT_04439 [Bacteroides intestinalis DSM
17393]
gi|189436309|gb|EDV05294.1| polygalacturonase (pectinase) [Bacteroides intestinalis DSM 17393]
Length = 534
Score = 55.5 bits (132), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 40/67 (59%), Gaps = 3/67 (4%)
Query: 82 MSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFL 141
++I DFG GDG NT+A A++ + KGG ++ +P GLWLTG L SN L+
Sbjct: 58 VNIIDFGAKGDGIVLNTKAINDAIKAVNA---KGGGKVVIPGGLWLTGPIELLSNVNLYT 114
Query: 142 ERGAVML 148
E A++L
Sbjct: 115 EMNALIL 121
>gi|260642009|ref|ZP_05414289.2| exo-poly-alpha-D-galacturonosidase [Bacteroides finegoldii DSM
17565]
gi|260623835|gb|EEX46706.1| polygalacturonase (pectinase) [Bacteroides finegoldii DSM 17565]
Length = 546
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 41/67 (61%), Gaps = 3/67 (4%)
Query: 82 MSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFL 141
++I+ FG GDG NT+A A++ + GG ++ +PEG+WLTG L SN L+
Sbjct: 59 VNIEKFGAKGDGLFLNTKAINDAIKDVN---QHGGGKVIIPEGIWLTGPIELLSNVNLYT 115
Query: 142 ERGAVML 148
ER A++L
Sbjct: 116 ERNALVL 122
>gi|298482165|ref|ZP_07000353.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. D22]
gi|298271722|gb|EFI13295.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. D22]
Length = 539
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 42/67 (62%), Gaps = 3/67 (4%)
Query: 82 MSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFL 141
++I+ FG GDG NT+A A++ + +GG ++ +PEG+WLTG L SN L+
Sbjct: 60 VNIEKFGAKGDGLYLNTKAINDAIKEVN---QRGGGKVIIPEGIWLTGPIELLSNVNLYT 116
Query: 142 ERGAVML 148
E+ A++L
Sbjct: 117 EQNALVL 123
>gi|423301929|ref|ZP_17279952.1| hypothetical protein HMPREF1057_03093 [Bacteroides finegoldii
CL09T03C10]
gi|408471020|gb|EKJ89552.1| hypothetical protein HMPREF1057_03093 [Bacteroides finegoldii
CL09T03C10]
Length = 546
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 41/67 (61%), Gaps = 3/67 (4%)
Query: 82 MSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFL 141
++I+ FG GDG NT+A A++ + GG ++ +PEG+WLTG L SN L+
Sbjct: 59 VNIEKFGAKGDGLFLNTKAINDAIKDVN---QHGGGKVIIPEGIWLTGPIELLSNVNLYT 115
Query: 142 ERGAVML 148
ER A++L
Sbjct: 116 ERNALVL 122
>gi|393781473|ref|ZP_10369668.1| hypothetical protein HMPREF1071_00536 [Bacteroides salyersiae
CL02T12C01]
gi|392676536|gb|EIY69968.1| hypothetical protein HMPREF1071_00536 [Bacteroides salyersiae
CL02T12C01]
Length = 537
Score = 55.1 bits (131), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 50/93 (53%), Gaps = 5/93 (5%)
Query: 56 DGAIFDPDSCAAGLLGDQYLPERKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKG 115
D +I++ ++ P+ +V +I +G DG NTEA A++ + KG
Sbjct: 33 DNSIYNDLPFEMPVVEQPTFPDYEV--NIVAYGAKNDGKFLNTEAINNAIKAVNA---KG 87
Query: 116 GAQLNVPEGLWLTGSFNLTSNFTLFLERGAVML 148
G ++ +PEGLWLTG L SN L+ ER A++L
Sbjct: 88 GGKVIIPEGLWLTGPIVLLSNVNLYTERNALIL 120
>gi|375254270|ref|YP_005013437.1| hypothetical protein BFO_0490 [Tannerella forsythia ATCC 43037]
gi|363408292|gb|AEW21978.1| hypothetical protein BFO_0490 [Tannerella forsythia ATCC 43037]
Length = 493
Score = 55.1 bits (131), Expect = 9e-06, Method: Composition-based stats.
Identities = 30/64 (46%), Positives = 40/64 (62%), Gaps = 3/64 (4%)
Query: 87 FGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFLERGAV 146
FG DG T NT + +KA+ ++ DKGG +L G +LTG+ L SN TL L+ GAV
Sbjct: 29 FGIRSDGATLNTRSIQKAIDHIH---DKGGGRLVFSVGRYLTGTIYLKSNVTLHLKEGAV 85
Query: 147 MLGS 150
+LGS
Sbjct: 86 LLGS 89
>gi|294807547|ref|ZP_06766344.1| polygalacturonase (pectinase) [Bacteroides xylanisolvens SD CC 1b]
gi|345512393|ref|ZP_08791923.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. D1]
gi|294445248|gb|EFG13918.1| polygalacturonase (pectinase) [Bacteroides xylanisolvens SD CC 1b]
gi|345453872|gb|EEO50012.2| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. D1]
Length = 529
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 42/67 (62%), Gaps = 3/67 (4%)
Query: 82 MSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFL 141
++I+ FG GDG NT+A A++ + +GG ++ +PEG+WLTG L SN L+
Sbjct: 50 VNIEKFGAKGDGLFLNTKAINDAIKEVN---QRGGGKVIIPEGIWLTGPIELLSNVNLYT 106
Query: 142 ERGAVML 148
E+ A++L
Sbjct: 107 EQNALVL 113
>gi|255531484|ref|YP_003091856.1| glycoside hydrolase family protein [Pedobacter heparinus DSM 2366]
gi|255344468|gb|ACU03794.1| glycoside hydrolase family 28 [Pedobacter heparinus DSM 2366]
Length = 489
Score = 55.1 bits (131), Expect = 1e-05, Method: Composition-based stats.
Identities = 28/64 (43%), Positives = 40/64 (62%), Gaps = 3/64 (4%)
Query: 87 FGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFLERGAV 146
FG +G+T NT + +KAV Y+ +KGG L G +LTG+ L SN T+ LE GA+
Sbjct: 30 FGIKSNGSTMNTNSIQKAVNYIS---EKGGGTLRFYVGRYLTGTIQLKSNVTILLEEGAI 86
Query: 147 MLGS 150
++GS
Sbjct: 87 IVGS 90
>gi|237712598|ref|ZP_04543079.1| glycoside hydrolase family 28 protein [Bacteroides sp. 9_1_42FAA]
gi|423229037|ref|ZP_17215442.1| hypothetical protein HMPREF1063_01262 [Bacteroides dorei
CL02T00C15]
gi|423244877|ref|ZP_17225951.1| hypothetical protein HMPREF1064_02157 [Bacteroides dorei
CL02T12C06]
gi|229453919|gb|EEO59640.1| glycoside hydrolase family 28 protein [Bacteroides sp. 9_1_42FAA]
gi|392634790|gb|EIY28702.1| hypothetical protein HMPREF1063_01262 [Bacteroides dorei
CL02T00C15]
gi|392640918|gb|EIY34709.1| hypothetical protein HMPREF1064_02157 [Bacteroides dorei
CL02T12C06]
Length = 462
Score = 55.1 bits (131), Expect = 1e-05, Method: Composition-based stats.
Identities = 30/73 (41%), Positives = 39/73 (53%), Gaps = 5/73 (6%)
Query: 75 LPERKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLT 134
PE+ SI D+G V G T NTEA KA+ GG ++ +PEG WLTG +
Sbjct: 47 FPEQD--FSIVDYGAVKGGETVNTEAIAKAI---AACNKAGGGRVVIPEGEWLTGPIHFQ 101
Query: 135 SNFTLFLERGAVM 147
SN L LE A++
Sbjct: 102 SNVNLHLEENAIL 114
>gi|212690918|ref|ZP_03299046.1| hypothetical protein BACDOR_00406 [Bacteroides dorei DSM 17855]
gi|212666150|gb|EEB26722.1| polygalacturonase (pectinase) [Bacteroides dorei DSM 17855]
Length = 462
Score = 55.1 bits (131), Expect = 1e-05, Method: Composition-based stats.
Identities = 30/73 (41%), Positives = 39/73 (53%), Gaps = 5/73 (6%)
Query: 75 LPERKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLT 134
PE+ SI D+G V G T NTEA KA+ GG ++ +PEG WLTG +
Sbjct: 47 FPEQD--FSIVDYGAVKGGETVNTEAIAKAI---AACNKAGGGRVVIPEGEWLTGPIHFQ 101
Query: 135 SNFTLFLERGAVM 147
SN L LE A++
Sbjct: 102 SNVNLHLEENAIL 114
>gi|374983540|ref|YP_004959035.1| glycoside hydrolase family protein [Streptomyces bingchenggensis
BCW-1]
gi|297154192|gb|ADI03904.1| glycoside hydrolase family 28 [Streptomyces bingchenggensis BCW-1]
Length = 475
Score = 55.1 bits (131), Expect = 1e-05, Method: Composition-based stats.
Identities = 31/73 (42%), Positives = 40/73 (54%), Gaps = 5/73 (6%)
Query: 75 LPERKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLT 134
P R +I D+G VGDG T NTEAFR A+ GG + VPEG +LTG+ +L
Sbjct: 57 FPRR--TFTITDYGAVGDGQTMNTEAFRAAIADCH---RAGGGHVLVPEGRFLTGAIHLR 111
Query: 135 SNFTLFLERGAVM 147
S L + GA +
Sbjct: 112 SGVDLHVTEGATI 124
>gi|238750651|ref|ZP_04612150.1| Exo-poly-alpha-D-galacturonosidase [Yersinia rohdei ATCC 43380]
gi|238711041|gb|EEQ03260.1| Exo-poly-alpha-D-galacturonosidase [Yersinia rohdei ATCC 43380]
Length = 594
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 46/70 (65%), Gaps = 5/70 (7%)
Query: 82 MSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFL 141
++I+DFG + DG T NT+A ++A+ K G ++++P G++ +G+ L S+ TL L
Sbjct: 143 VNIRDFGAIDDGKTLNTKAIQQAIDSC-----KPGCRVDIPAGIYKSGALWLKSDMTLNL 197
Query: 142 ERGAVMLGSQ 151
E GA +LGS+
Sbjct: 198 EAGATLLGSE 207
>gi|262408522|ref|ZP_06085068.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
gi|294646518|ref|ZP_06724155.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CC 2a]
gi|262353387|gb|EEZ02481.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
gi|292638137|gb|EFF56518.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CC 2a]
Length = 539
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 42/67 (62%), Gaps = 3/67 (4%)
Query: 82 MSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFL 141
++I+ FG GDG NT+A A++ + +GG ++ +PEG+WLTG L SN L+
Sbjct: 60 VNIEKFGAKGDGLFLNTKAINDAIKEVN---QRGGGKVIIPEGIWLTGPIELLSNVNLYT 116
Query: 142 ERGAVML 148
E+ A++L
Sbjct: 117 EQNALVL 123
>gi|423212244|ref|ZP_17198773.1| hypothetical protein HMPREF1074_00305 [Bacteroides xylanisolvens
CL03T12C04]
gi|392695132|gb|EIY88357.1| hypothetical protein HMPREF1074_00305 [Bacteroides xylanisolvens
CL03T12C04]
Length = 539
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 42/67 (62%), Gaps = 3/67 (4%)
Query: 82 MSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFL 141
++I+ FG GDG NT+A A++ + +GG ++ +PEG+WLTG L SN L+
Sbjct: 60 VNIEKFGAKGDGLFLNTKAINDAIKEVN---QRGGGKVIIPEGIWLTGPIELLSNVNLYT 116
Query: 142 ERGAVML 148
E+ A++L
Sbjct: 117 EQNALVL 123
>gi|337746270|ref|YP_004640432.1| hypothetical protein KNP414_02001 [Paenibacillus mucilaginosus
KNP414]
gi|336297459|gb|AEI40562.1| hypothetical protein KNP414_02001 [Paenibacillus mucilaginosus
KNP414]
Length = 475
Score = 54.7 bits (130), Expect = 1e-05, Method: Composition-based stats.
Identities = 28/67 (41%), Positives = 41/67 (61%), Gaps = 5/67 (7%)
Query: 84 IKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFLER 143
I +FG V DG T NTEA + A+ G ++ VP+G ++TG+ L S TL++E+
Sbjct: 60 ITEFGAVADGQTINTEAIQAAIDACTA-----GGKVVVPKGTFVTGAIFLKSRMTLYIEQ 114
Query: 144 GAVMLGS 150
G V+LGS
Sbjct: 115 GGVLLGS 121
>gi|336413111|ref|ZP_08593464.1| hypothetical protein HMPREF1017_00572 [Bacteroides ovatus
3_8_47FAA]
gi|335943157|gb|EGN04999.1| hypothetical protein HMPREF1017_00572 [Bacteroides ovatus
3_8_47FAA]
Length = 486
Score = 54.7 bits (130), Expect = 1e-05, Method: Composition-based stats.
Identities = 31/82 (37%), Positives = 45/82 (54%), Gaps = 5/82 (6%)
Query: 69 LLGDQYLPERKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLT 128
L+ Q + R V I FG VGD T NT+A + A+ + GG ++ VP G ++T
Sbjct: 25 LIAAQSIAARNV--EITQFGAVGDAATLNTKALQMAI---DTCAETGGGEVTVPPGTYIT 79
Query: 129 GSFNLTSNFTLFLERGAVMLGS 150
G+ L SN L L RG+++ GS
Sbjct: 80 GTIYLRSNVELHLCRGSIIRGS 101
>gi|375150362|ref|YP_005012803.1| Exo-poly-alpha-galacturonosidase [Niastella koreensis GR20-10]
gi|361064408|gb|AEW03400.1| Exo-poly-alpha-galacturonosidase [Niastella koreensis GR20-10]
Length = 532
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 40/70 (57%), Gaps = 3/70 (4%)
Query: 78 RKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNF 137
+K +SI FG DG T NTEA K + + +GG + +P+G+WLTG L SN
Sbjct: 36 KKDTLSITQFGAKSDGLTLNTEAINKTI---EACSKQGGGVVLIPQGIWLTGPIVLKSNV 92
Query: 138 TLFLERGAVM 147
L++ R A++
Sbjct: 93 NLYVSRAALI 102
>gi|319643181|ref|ZP_07997809.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_40A]
gi|345520529|ref|ZP_08799916.1| polygalacturonase [Bacteroides sp. 4_3_47FAA]
gi|423315312|ref|ZP_17293242.1| hypothetical protein HMPREF1058_03854 [Bacteroides vulgatus
CL09T03C04]
gi|423315336|ref|ZP_17293266.1| hypothetical protein HMPREF1058_03878 [Bacteroides vulgatus
CL09T03C04]
gi|254835049|gb|EET15358.1| polygalacturonase [Bacteroides sp. 4_3_47FAA]
gi|317385085|gb|EFV66036.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_40A]
gi|392679549|gb|EIY72930.1| hypothetical protein HMPREF1058_03854 [Bacteroides vulgatus
CL09T03C04]
gi|392679573|gb|EIY72954.1| hypothetical protein HMPREF1058_03878 [Bacteroides vulgatus
CL09T03C04]
Length = 462
Score = 54.7 bits (130), Expect = 1e-05, Method: Composition-based stats.
Identities = 30/73 (41%), Positives = 39/73 (53%), Gaps = 5/73 (6%)
Query: 75 LPERKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLT 134
PE+ SI D+G V G T NTEA KA+ GG ++ +PEG WLTG +
Sbjct: 47 FPEQD--FSIVDYGAVKGGETVNTEAIAKAI---AACNKAGGGRVVIPEGEWLTGPVHFK 101
Query: 135 SNFTLFLERGAVM 147
SN L LE A++
Sbjct: 102 SNVNLHLEENAIL 114
>gi|150002759|ref|YP_001297503.1| polygalacturonase [Bacteroides vulgatus ATCC 8482]
gi|149931183|gb|ABR37881.1| glycoside hydrolase family 28, candidate polygalacturonase
[Bacteroides vulgatus ATCC 8482]
Length = 462
Score = 54.7 bits (130), Expect = 1e-05, Method: Composition-based stats.
Identities = 30/73 (41%), Positives = 39/73 (53%), Gaps = 5/73 (6%)
Query: 75 LPERKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLT 134
PE+ SI D+G V G T NTEA KA+ GG ++ +PEG WLTG +
Sbjct: 47 FPEQD--FSIVDYGAVKGGETVNTEAIAKAI---AACNKAGGGRVVIPEGEWLTGPVHFK 101
Query: 135 SNFTLFLERGAVM 147
SN L LE A++
Sbjct: 102 SNVNLHLEENAIL 114
>gi|15893646|ref|NP_346995.1| polygalacturonase [Clostridium acetobutylicum ATCC 824]
gi|337735568|ref|YP_004635015.1| polygalacturonase [Clostridium acetobutylicum DSM 1731]
gi|384457079|ref|YP_005669499.1| Putative polygalacturonase (pectinase) [Clostridium acetobutylicum
EA 2018]
gi|15023202|gb|AAK78335.1|AE007550_2 Putative polygalacturonase (pectinase) [Clostridium acetobutylicum
ATCC 824]
gi|325507768|gb|ADZ19404.1| Putative polygalacturonase (pectinase) [Clostridium acetobutylicum
EA 2018]
gi|336292627|gb|AEI33761.1| putative polygalacturonase (pectinase) [Clostridium acetobutylicum
DSM 1731]
Length = 513
Score = 54.7 bits (130), Expect = 1e-05, Method: Composition-based stats.
Identities = 29/68 (42%), Positives = 41/68 (60%), Gaps = 5/68 (7%)
Query: 82 MSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFL 141
++I DFG VGDG NT + A++ FG ++ +P+G +LTG L SN TL L
Sbjct: 84 VNILDFGAVGDGNHVNTAFIQAAIQVCPAFG-----RVIIPKGTYLTGPLFLKSNITLEL 138
Query: 142 ERGAVMLG 149
E G+V+LG
Sbjct: 139 EEGSVLLG 146
>gi|265752277|ref|ZP_06088070.1| polygalacturonase [Bacteroides sp. 3_1_33FAA]
gi|263237069|gb|EEZ22539.1| polygalacturonase [Bacteroides sp. 3_1_33FAA]
Length = 462
Score = 54.7 bits (130), Expect = 1e-05, Method: Composition-based stats.
Identities = 30/73 (41%), Positives = 39/73 (53%), Gaps = 5/73 (6%)
Query: 75 LPERKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLT 134
PE+ SI D+G V G T NTEA KA+ GG ++ +PEG WLTG +
Sbjct: 47 FPEQD--FSIVDYGAVKGGETVNTEAIAKAI---AACNKAGGGRVVIPEGEWLTGPVHFQ 101
Query: 135 SNFTLFLERGAVM 147
SN L LE A++
Sbjct: 102 SNVNLHLEENAIL 114
>gi|345512498|ref|ZP_08792024.1| polygalacturonase [Bacteroides dorei 5_1_36/D4]
gi|229435434|gb|EEO45511.1| polygalacturonase [Bacteroides dorei 5_1_36/D4]
Length = 462
Score = 54.7 bits (130), Expect = 1e-05, Method: Composition-based stats.
Identities = 30/73 (41%), Positives = 39/73 (53%), Gaps = 5/73 (6%)
Query: 75 LPERKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLT 134
PE+ SI D+G V G T NTEA KA+ GG ++ +PEG WLTG +
Sbjct: 47 FPEQD--FSIVDYGAVKGGETVNTEAIAKAI---AACNKAGGGRVVIPEGEWLTGPVHFQ 101
Query: 135 SNFTLFLERGAVM 147
SN L LE A++
Sbjct: 102 SNVNLHLEENAIL 114
>gi|423226670|ref|ZP_17213135.1| hypothetical protein HMPREF1062_05321 [Bacteroides cellulosilyticus
CL02T12C19]
gi|392628197|gb|EIY22231.1| hypothetical protein HMPREF1062_05321 [Bacteroides cellulosilyticus
CL02T12C19]
Length = 495
Score = 54.7 bits (130), Expect = 1e-05, Method: Composition-based stats.
Identities = 31/68 (45%), Positives = 39/68 (57%), Gaps = 3/68 (4%)
Query: 83 SIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFLE 142
SI DFG DG T NT + A+ Y+ GG +L G +LTG+ L SN TL L
Sbjct: 26 SIMDFGAKPDGVTLNTHTIQYAIDYVH---TAGGGKLIFDAGNYLTGTIYLKSNVTLHLA 82
Query: 143 RGAVMLGS 150
+GAV+LGS
Sbjct: 83 QGAVLLGS 90
>gi|255531483|ref|YP_003091855.1| endopygalactorunase [Pedobacter heparinus DSM 2366]
gi|255344467|gb|ACU03793.1| Endopygalactorunase [Pedobacter heparinus DSM 2366]
Length = 246
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 43/75 (57%), Gaps = 3/75 (4%)
Query: 76 PERKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTS 135
P + + + FG V DG T+NT + + A+ ++ +KGG +LN G +LTG L S
Sbjct: 17 PLKALEYNASLFGCVSDGVTNNTSSIQYAINFI---AEKGGGKLNFYVGRYLTGGIQLKS 73
Query: 136 NFTLFLERGAVMLGS 150
N T+ L GAV+L S
Sbjct: 74 NVTIELHEGAVLLAS 88
>gi|224537414|ref|ZP_03677953.1| hypothetical protein BACCELL_02292 [Bacteroides cellulosilyticus
DSM 14838]
gi|224520940|gb|EEF90045.1| hypothetical protein BACCELL_02292 [Bacteroides cellulosilyticus
DSM 14838]
Length = 495
Score = 54.7 bits (130), Expect = 1e-05, Method: Composition-based stats.
Identities = 31/68 (45%), Positives = 39/68 (57%), Gaps = 3/68 (4%)
Query: 83 SIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFLE 142
SI DFG DG T NT + A+ Y+ GG +L G +LTG+ L SN TL L
Sbjct: 26 SIMDFGAKPDGVTLNTHTIQYAIDYVH---TAGGGKLIFDAGNYLTGTIYLKSNVTLHLA 82
Query: 143 RGAVMLGS 150
+GAV+LGS
Sbjct: 83 QGAVLLGS 90
>gi|308189023|ref|YP_003933154.1| polygalacturonase [Pantoea vagans C9-1]
gi|308059533|gb|ADO11705.1| Putative polygalacturonase precursor [Pantoea vagans C9-1]
Length = 444
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 39/69 (56%), Gaps = 3/69 (4%)
Query: 82 MSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFL 141
+S+ DF V DG T +T ++A M GG +L +P G + +G NL S+F L L
Sbjct: 4 LSLADFHPVADGETPDTAVLQRA---MDQIAAAGGGRLTLPAGRYRSGCLNLPSDFELHL 60
Query: 142 ERGAVMLGS 150
E GAV++ S
Sbjct: 61 EAGAVLIAS 69
>gi|409100257|ref|ZP_11220281.1| glycoside hydrolase family protein [Pedobacter agri PB92]
Length = 557
Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 83 SIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFLE 142
SI FG GDG + NTE+ KA+ KGG + +P GLWLTG L SN L L+
Sbjct: 48 SIVSFGAKGDGVSMNTESINKAI---AAVSQKGGGVVLIPGGLWLTGPIELKSNVNLHLK 104
Query: 143 RGAVM 147
R A++
Sbjct: 105 RDALL 109
>gi|423216971|ref|ZP_17203467.1| hypothetical protein HMPREF1061_00240 [Bacteroides caccae
CL03T12C61]
gi|392629501|gb|EIY23508.1| hypothetical protein HMPREF1061_00240 [Bacteroides caccae
CL03T12C61]
Length = 539
Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 42/67 (62%), Gaps = 3/67 (4%)
Query: 82 MSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFL 141
++I+ FG GDG NT+A A++ + +GG ++ +PEG+WLTG L SN L+
Sbjct: 60 VNIEKFGAKGDGLFLNTKAINDAIKDVN---QRGGGKVIIPEGIWLTGPIELLSNVNLYT 116
Query: 142 ERGAVML 148
E+ A++L
Sbjct: 117 EQNALVL 123
>gi|354603307|ref|ZP_09021306.1| hypothetical protein HMPREF9450_00221 [Alistipes indistinctus YIT
12060]
gi|353349184|gb|EHB93450.1| hypothetical protein HMPREF9450_00221 [Alistipes indistinctus YIT
12060]
Length = 490
Score = 54.3 bits (129), Expect = 1e-05, Method: Composition-based stats.
Identities = 30/64 (46%), Positives = 40/64 (62%), Gaps = 3/64 (4%)
Query: 87 FGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFLERGAV 146
FG +GTT NT A +KA+ Y+ ++GG +L G +LTGS L SN T+ L GAV
Sbjct: 30 FGIKSNGTTMNTTAIQKAIDYIH---EQGGGRLVFYVGRYLTGSIELKSNVTIHLNEGAV 86
Query: 147 MLGS 150
+LGS
Sbjct: 87 LLGS 90
>gi|153807509|ref|ZP_01960177.1| hypothetical protein BACCAC_01789 [Bacteroides caccae ATCC 43185]
gi|149129871|gb|EDM21083.1| polygalacturonase (pectinase) [Bacteroides caccae ATCC 43185]
Length = 539
Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 42/67 (62%), Gaps = 3/67 (4%)
Query: 82 MSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFL 141
++I+ FG GDG NT+A A++ + +GG ++ +PEG+WLTG L SN L+
Sbjct: 60 VNIEKFGAKGDGLFLNTKAINDAIKDVN---QRGGGKVIIPEGIWLTGPIELLSNVNLYT 116
Query: 142 ERGAVML 148
E+ A++L
Sbjct: 117 EQNALVL 123
>gi|383114440|ref|ZP_09935204.1| hypothetical protein BSGG_5145 [Bacteroides sp. D2]
gi|382948584|gb|EIC71811.1| hypothetical protein BSGG_5145 [Bacteroides sp. D2]
Length = 529
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 42/67 (62%), Gaps = 3/67 (4%)
Query: 82 MSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFL 141
++I+ FG GDG NT+A A++ + +GG ++ +PEG+WLTG L SN L+
Sbjct: 50 VNIEKFGAKGDGLFLNTKAINDAIKDVN---QRGGGKVIIPEGVWLTGPIELLSNVNLYT 106
Query: 142 ERGAVML 148
E+ A++L
Sbjct: 107 EQNALVL 113
>gi|423294962|ref|ZP_17273089.1| hypothetical protein HMPREF1070_01754 [Bacteroides ovatus
CL03T12C18]
gi|392674542|gb|EIY67988.1| hypothetical protein HMPREF1070_01754 [Bacteroides ovatus
CL03T12C18]
Length = 529
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 42/67 (62%), Gaps = 3/67 (4%)
Query: 82 MSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFL 141
++I+ FG GDG NT+A A++ + +GG ++ +PEG+WLTG L SN L+
Sbjct: 50 VNIEKFGAKGDGLFLNTKAINDAIKDVN---QRGGGKVIIPEGVWLTGPIELLSNVNLYT 106
Query: 142 ERGAVML 148
E+ A++L
Sbjct: 107 EQNALVL 113
>gi|440761134|ref|ZP_20940226.1| Polygalacturonase [Pantoea agglomerans 299R]
gi|436425064|gb|ELP22809.1| Polygalacturonase [Pantoea agglomerans 299R]
Length = 443
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 39/69 (56%), Gaps = 3/69 (4%)
Query: 82 MSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFL 141
+S+ DF V DG T +T ++A M GG +L +P G + +G NL S+F L L
Sbjct: 3 LSLADFHPVADGETPDTAVLQRA---MDQIAAAGGGRLTLPAGRYRSGCLNLPSDFELHL 59
Query: 142 ERGAVMLGS 150
E GAV++ S
Sbjct: 60 EAGAVLIAS 68
>gi|423239876|ref|ZP_17220991.1| hypothetical protein HMPREF1065_01614 [Bacteroides dorei
CL03T12C01]
gi|392644865|gb|EIY38599.1| hypothetical protein HMPREF1065_01614 [Bacteroides dorei
CL03T12C01]
Length = 462
Score = 54.3 bits (129), Expect = 2e-05, Method: Composition-based stats.
Identities = 30/73 (41%), Positives = 39/73 (53%), Gaps = 5/73 (6%)
Query: 75 LPERKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLT 134
PE+ SI D+G V G T NTEA KA+ GG ++ +PEG WLTG +
Sbjct: 47 FPEQD--FSIVDYGAVKGGETVNTEAIAKAI---VACNKAGGGRVVIPEGEWLTGPIHFQ 101
Query: 135 SNFTLFLERGAVM 147
SN L LE A++
Sbjct: 102 SNVNLHLEENAIL 114
>gi|293369380|ref|ZP_06615965.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CMC 3f]
gi|336406828|ref|ZP_08587475.1| hypothetical protein HMPREF0127_04788 [Bacteroides sp. 1_1_30]
gi|292635547|gb|EFF54054.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CMC 3f]
gi|335933190|gb|EGM95200.1| hypothetical protein HMPREF0127_04788 [Bacteroides sp. 1_1_30]
Length = 529
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 42/67 (62%), Gaps = 3/67 (4%)
Query: 82 MSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFL 141
++I+ FG GDG NT+A A++ + +GG ++ +PEG+WLTG L SN L+
Sbjct: 50 VNIEKFGAKGDGLFLNTKAINDAIKDVN---QRGGGKVIIPEGVWLTGPIELLSNVNLYT 106
Query: 142 ERGAVML 148
E+ A++L
Sbjct: 107 EQNALVL 113
>gi|294776431|ref|ZP_06741909.1| polygalacturonase (pectinase) [Bacteroides vulgatus PC510]
gi|294449757|gb|EFG18279.1| polygalacturonase (pectinase) [Bacteroides vulgatus PC510]
Length = 424
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 39/73 (53%), Gaps = 5/73 (6%)
Query: 75 LPERKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLT 134
PE+ SI D+G V G T NTEA KA+ GG ++ +PEG WLTG +
Sbjct: 9 FPEQD--FSIVDYGAVKGGETVNTEAIAKAI---AACNKAGGGRVVIPEGEWLTGPVHFK 63
Query: 135 SNFTLFLERGAVM 147
SN L LE A++
Sbjct: 64 SNVNLHLEENAIL 76
>gi|423342237|ref|ZP_17319951.1| hypothetical protein HMPREF1077_01381 [Parabacteroides johnsonii
CL02T12C29]
gi|409218151|gb|EKN11123.1| hypothetical protein HMPREF1077_01381 [Parabacteroides johnsonii
CL02T12C29]
Length = 498
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 43/86 (50%), Gaps = 6/86 (6%)
Query: 65 CAAGLLGDQYLPERKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEG 124
C A L Y A DFG + DG T NT + +K + ++ G G +L G
Sbjct: 15 CVASLSAKDYYATDYYAT---DFGVIADGKTLNTNSIQKGIDFVNKLG---GGRLVFTAG 68
Query: 125 LWLTGSFNLTSNFTLFLERGAVMLGS 150
+LTGS L SN TL LE GA +LGS
Sbjct: 69 NYLTGSIYLKSNVTLHLEEGATLLGS 94
>gi|304398511|ref|ZP_07380384.1| glycoside hydrolase family 28 [Pantoea sp. aB]
gi|304354016|gb|EFM18390.1| glycoside hydrolase family 28 [Pantoea sp. aB]
Length = 443
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 39/69 (56%), Gaps = 3/69 (4%)
Query: 82 MSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFL 141
+S+ DF V DG T +T ++A M GG +L +P G + +G NL S+F L L
Sbjct: 3 LSLADFHPVADGETPDTAVLQRA---MDQIAAAGGGRLTLPAGRYRSGCLNLPSDFELHL 59
Query: 142 ERGAVMLGS 150
E GAV++ S
Sbjct: 60 EAGAVLIAS 68
>gi|299148526|ref|ZP_07041588.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. 3_1_23]
gi|298513287|gb|EFI37174.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. 3_1_23]
Length = 539
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 42/67 (62%), Gaps = 3/67 (4%)
Query: 82 MSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFL 141
++I+ FG GDG NT+A A++ + +GG ++ +PEG+WLTG L SN L+
Sbjct: 60 VNIEKFGAKGDGLFLNTKAINDAIKDVN---QRGGGKVIIPEGVWLTGPIELLSNVNLYT 116
Query: 142 ERGAVML 148
E+ A++L
Sbjct: 117 EQNALVL 123
>gi|160887026|ref|ZP_02068029.1| hypothetical protein BACOVA_05040 [Bacteroides ovatus ATCC 8483]
gi|423288884|ref|ZP_17267735.1| hypothetical protein HMPREF1069_02778 [Bacteroides ovatus
CL02T12C04]
gi|156107437|gb|EDO09182.1| polygalacturonase (pectinase) [Bacteroides ovatus ATCC 8483]
gi|295086775|emb|CBK68298.1| Endopolygalacturonase [Bacteroides xylanisolvens XB1A]
gi|392668974|gb|EIY62466.1| hypothetical protein HMPREF1069_02778 [Bacteroides ovatus
CL02T12C04]
Length = 539
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 42/67 (62%), Gaps = 3/67 (4%)
Query: 82 MSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFL 141
++I+ FG GDG NT+A A++ + +GG ++ +PEG+WLTG L SN L+
Sbjct: 60 VNIEKFGAKGDGLFLNTKAINDAIKDVN---QRGGGKVIIPEGVWLTGPIELLSNVNLYT 116
Query: 142 ERGAVML 148
E+ A++L
Sbjct: 117 EQNALVL 123
>gi|373956691|ref|ZP_09616651.1| glycoside hydrolase family 28 [Mucilaginibacter paludis DSM 18603]
gi|373893291|gb|EHQ29188.1| glycoside hydrolase family 28 [Mucilaginibacter paludis DSM 18603]
Length = 474
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 47/92 (51%), Gaps = 3/92 (3%)
Query: 60 FDPDSCAAGLLGDQYLPERKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQL 119
D D L+G + +P + + +G V +GTT NT A +KA+ KGG +
Sbjct: 24 IDADPAWVKLVGSKKMPAKTTVFKVLAYGAVNNGTTLNTSAIQKAIDACSA---KGGGIV 80
Query: 120 NVPEGLWLTGSFNLTSNFTLFLERGAVMLGSQ 151
+ G +LTGS L N L +++G +LGSQ
Sbjct: 81 SFAPGKYLTGSIFLKKNVRLQIDKGVELLGSQ 112
>gi|284036172|ref|YP_003386102.1| glycoside hydrolase family protein [Spirosoma linguale DSM 74]
gi|283815465|gb|ADB37303.1| glycoside hydrolase family 28 [Spirosoma linguale DSM 74]
Length = 544
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/70 (45%), Positives = 38/70 (54%), Gaps = 3/70 (4%)
Query: 78 RKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNF 137
RK ++I G V DG T NT A KA+ G GG L VP GLWLTG L SN
Sbjct: 35 RKDTIAISKLGAVADGLTLNTAAINKAIDQCTKAG--GGVVL-VPRGLWLTGPVTLKSNV 91
Query: 138 TLFLERGAVM 147
L L +GA++
Sbjct: 92 NLHLAKGALL 101
>gi|399031152|ref|ZP_10731291.1| endopolygalacturonase [Flavobacterium sp. CF136]
gi|398070621|gb|EJL61913.1| endopolygalacturonase [Flavobacterium sp. CF136]
Length = 562
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 39/69 (56%), Gaps = 3/69 (4%)
Query: 79 KVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFT 138
K ++IKDFG V G NT+AF A+ KGG ++ +P G+WLTG L SN
Sbjct: 52 KNTVNIKDFGAVNGGYVLNTKAFADAI---DAVSKKGGGKVVIPPGIWLTGPIILKSNLE 108
Query: 139 LFLERGAVM 147
L E GA++
Sbjct: 109 LHAETGALI 117
>gi|325679916|ref|ZP_08159485.1| polygalacturonase (pectinase) [Ruminococcus albus 8]
gi|324108354|gb|EGC02601.1| polygalacturonase (pectinase) [Ruminococcus albus 8]
Length = 513
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 40/70 (57%), Gaps = 5/70 (7%)
Query: 81 AMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLF 140
A+S+KDFG VGDG +T + + AV + G +L PEG +LTG NL S+ T+
Sbjct: 76 AVSVKDFGAVGDGVADDTLSIQTAVNCL-----PAGGRLRFPEGTYLTGPINLKSHITIE 130
Query: 141 LERGAVMLGS 150
A +LG+
Sbjct: 131 FTEKATLLGT 140
>gi|378582005|ref|ZP_09830645.1| putative polygalacturonase protein [Pantoea stewartii subsp.
stewartii DC283]
gi|377815320|gb|EHT98435.1| putative polygalacturonase protein [Pantoea stewartii subsp.
stewartii DC283]
Length = 443
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 42/70 (60%), Gaps = 3/70 (4%)
Query: 82 MSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFL 141
+S+ DF DG T +T+A ++A+ + + GG +L +P + +GS NL SNF L L
Sbjct: 3 LSLADFHPAADGETPDTQALQRAIDQI---AEAGGGRLTLPPVRYRSGSLNLPSNFELHL 59
Query: 142 ERGAVMLGSQ 151
GAV++ S+
Sbjct: 60 AAGAVLIASR 69
>gi|398384082|ref|ZP_10542136.1| endopolygalacturonase [Sphingobium sp. AP49]
gi|397723590|gb|EJK84083.1| endopolygalacturonase [Sphingobium sp. AP49]
Length = 526
Score = 53.9 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 25/69 (36%), Positives = 44/69 (63%), Gaps = 3/69 (4%)
Query: 82 MSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFL 141
M+++DFG GDG+ ++ A +A+ Y ++GG + VP G + + + +L SN TL+L
Sbjct: 35 MNVRDFGAKGDGSHIDSPAIDRAIAYA---AERGGGTVYVPPGSYASYTIHLKSNITLWL 91
Query: 142 ERGAVMLGS 150
+RGA +L +
Sbjct: 92 DRGATLLAA 100
>gi|408672530|ref|YP_006872278.1| glycoside hydrolase family 28 [Emticicia oligotrophica DSM 17448]
gi|387854154|gb|AFK02251.1| glycoside hydrolase family 28 [Emticicia oligotrophica DSM 17448]
Length = 789
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 40/70 (57%), Gaps = 3/70 (4%)
Query: 78 RKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNF 137
RK +I +G DG T NT+A +A+ G GG L VP+GLW+TG L SN
Sbjct: 275 RKDTFNISRYGAKADGITVNTKAINQAIEICNAAG--GGTVL-VPKGLWVTGPIVLKSNV 331
Query: 138 TLFLERGAVM 147
L LE+GA++
Sbjct: 332 NLHLEKGALL 341
>gi|359452816|ref|ZP_09242155.1| glycoside hydrolase, family 77 [Pseudoalteromonas sp. BSi20495]
gi|358050136|dbj|GAA78404.1| glycoside hydrolase, family 77 [Pseudoalteromonas sp. BSi20495]
Length = 489
Score = 53.9 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 26/65 (40%), Positives = 40/65 (61%), Gaps = 3/65 (4%)
Query: 83 SIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFLE 142
+I DFG GD T+NT A A++ +GG Q+ +P+G ++TG+ +L SN L LE
Sbjct: 64 NIIDFGANGDNKTNNTVAINNAIKSCNA---QGGGQVIIPQGQFITGAIHLLSNVNLHLE 120
Query: 143 RGAVM 147
GA++
Sbjct: 121 EGAIL 125
>gi|354603314|ref|ZP_09021313.1| hypothetical protein HMPREF9450_00228 [Alistipes indistinctus YIT
12060]
gi|353349191|gb|EHB93457.1| hypothetical protein HMPREF9450_00228 [Alistipes indistinctus YIT
12060]
Length = 491
Score = 53.9 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 30/64 (46%), Positives = 40/64 (62%), Gaps = 3/64 (4%)
Query: 87 FGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFLERGAV 146
FG +GTT NT + +KA+ Y+ +GG +L G +LTGS NL SN T+ L GAV
Sbjct: 27 FGIKSNGTTLNTSSIQKAIDYIH---SEGGGRLVFYVGRYLTGSINLRSNVTIQLNEGAV 83
Query: 147 MLGS 150
+LGS
Sbjct: 84 LLGS 87
>gi|336414787|ref|ZP_08595131.1| hypothetical protein HMPREF1017_02239 [Bacteroides ovatus
3_8_47FAA]
gi|335942157|gb|EGN04005.1| hypothetical protein HMPREF1017_02239 [Bacteroides ovatus
3_8_47FAA]
Length = 529
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 41/67 (61%), Gaps = 3/67 (4%)
Query: 82 MSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFL 141
++I+ FG GDG NT+A A++ + GG ++ +PEG+WLTG L SN L+
Sbjct: 50 VNIEKFGAKGDGLFLNTKAINDAIKDVN---QHGGGKVIIPEGIWLTGPIELLSNVNLYT 106
Query: 142 ERGAVML 148
E+ A++L
Sbjct: 107 EQNALVL 113
>gi|268612424|pdb|3JUR|A Chain A, The Crystal Structure Of A Hyperthermoactive
Exopolygalacturonase From Thermotoga Maritima
gi|268612425|pdb|3JUR|B Chain B, The Crystal Structure Of A Hyperthermoactive
Exopolygalacturonase From Thermotoga Maritima
gi|268612426|pdb|3JUR|C Chain C, The Crystal Structure Of A Hyperthermoactive
Exopolygalacturonase From Thermotoga Maritima
gi|268612427|pdb|3JUR|D Chain D, The Crystal Structure Of A Hyperthermoactive
Exopolygalacturonase From Thermotoga Maritima
Length = 448
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 45/68 (66%), Gaps = 5/68 (7%)
Query: 75 LPERKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLT 134
+P+R+V ++ DFG GDG T +E+F++A+ + +GG +L VPEG++LTG +L
Sbjct: 23 IPDREV--NLLDFGARGDGRTDCSESFKRAI---EELSKQGGGRLIVPEGVFLTGPIHLK 77
Query: 135 SNFTLFLE 142
SN L ++
Sbjct: 78 SNIELHVK 85
>gi|15643203|ref|NP_228247.1| exo-poly-alpha-D-galacturonosidase [Thermotoga maritima MSB8]
gi|4980944|gb|AAD35522.1|AE001722_6 exo-poly-alpha-D-galacturonosidase, putative [Thermotoga maritima
MSB8]
Length = 448
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 45/68 (66%), Gaps = 5/68 (7%)
Query: 75 LPERKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLT 134
+P+R+V ++ DFG GDG T +E+F++A+ + +GG +L VPEG++LTG +L
Sbjct: 23 IPDREV--NLLDFGARGDGRTDCSESFKRAI---EELSKQGGGRLIVPEGVFLTGPIHLK 77
Query: 135 SNFTLFLE 142
SN L ++
Sbjct: 78 SNIELHVK 85
>gi|418045389|ref|ZP_12683485.1| glycoside hydrolase family 28 [Thermotoga maritima MSB8]
gi|351678471|gb|EHA61618.1| glycoside hydrolase family 28 [Thermotoga maritima MSB8]
Length = 446
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 45/68 (66%), Gaps = 5/68 (7%)
Query: 75 LPERKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLT 134
+P+R+V ++ DFG GDG T +E+F++A+ + +GG +L VPEG++LTG +L
Sbjct: 21 IPDREV--NLLDFGARGDGRTDCSESFKRAI---EELSKQGGGRLIVPEGVFLTGPIHLK 75
Query: 135 SNFTLFLE 142
SN L ++
Sbjct: 76 SNIELHVK 83
>gi|268317938|ref|YP_003291657.1| glycoside hydrolase [Rhodothermus marinus DSM 4252]
gi|345304218|ref|YP_004826120.1| polygalacturonase [Rhodothermus marinus SG0.5JP17-172]
gi|262335472|gb|ACY49269.1| glycoside hydrolase family 28 [Rhodothermus marinus DSM 4252]
gi|345113451|gb|AEN74283.1| Polygalacturonase [Rhodothermus marinus SG0.5JP17-172]
Length = 470
Score = 53.5 bits (127), Expect = 3e-05, Method: Composition-based stats.
Identities = 29/73 (39%), Positives = 42/73 (57%), Gaps = 5/73 (6%)
Query: 75 LPERKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLT 134
PER ++ +G VGDG T T+AFR+A+ + GG ++ VP G +LTG +L
Sbjct: 52 FPERDFVLT--RYGAVGDGRTDCTDAFRQAI---EACHRAGGGRVVVPRGTFLTGPIHLA 106
Query: 135 SNFTLFLERGAVM 147
SN L L+ GA +
Sbjct: 107 SNVNLHLDDGATV 119
>gi|322437527|ref|YP_004219617.1| glycoside hydrolase family protein [Granulicella tundricola
MP5ACTX9]
gi|321165420|gb|ADW71123.1| glycoside hydrolase family 28 [Granulicella tundricola MP5ACTX9]
Length = 467
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 43/71 (60%), Gaps = 3/71 (4%)
Query: 80 VAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTL 139
V ++++DFG +GDG T TE+ + R + G GG ++ +P G +LTGS +L + TL
Sbjct: 48 VQLNVRDFGAIGDGITLETESLQ---RTIDRCGVLGGGEVIIPAGRYLTGSVSLRTKVTL 104
Query: 140 FLERGAVMLGS 150
L V+LGS
Sbjct: 105 RLAAECVILGS 115
>gi|452958539|gb|EME63892.1| endopolygalacturonase [Amycolatopsis decaplanina DSM 44594]
Length = 453
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 40/73 (54%), Gaps = 5/73 (6%)
Query: 75 LPERKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLT 134
P+R SI DFG GDG T NT A RKA+ +GG + VP G ++TG+ L
Sbjct: 52 FPDR--TFSILDFGARGDGKTDNTAAIRKAIETANA---RGGGHVVVPRGTFVTGAVYLK 106
Query: 135 SNFTLFLERGAVM 147
S+ L L GAV+
Sbjct: 107 SDVDLHLAAGAVL 119
>gi|238794289|ref|ZP_04637902.1| Exo-poly-alpha-D-galacturonosidase [Yersinia intermedia ATCC 29909]
gi|238726373|gb|EEQ17914.1| Exo-poly-alpha-D-galacturonosidase [Yersinia intermedia ATCC 29909]
Length = 608
Score = 53.5 bits (127), Expect = 3e-05, Method: Composition-based stats.
Identities = 32/97 (32%), Positives = 59/97 (60%), Gaps = 10/97 (10%)
Query: 55 ADGAIFDPDSCAAGLLGDQYLPERKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDK 114
ADG++ S A+ L+ + + ++ ++++DFG V DG T NT+A ++A+ K
Sbjct: 135 ADGSL----SAASNLVTAKTSAKPQI-VNVRDFGAVNDGNTLNTKAIQQAIDSC-----K 184
Query: 115 GGAQLNVPEGLWLTGSFNLTSNFTLFLERGAVMLGSQ 151
G ++ +P G++ +G+ L S+ TL L+ GA +LGS+
Sbjct: 185 PGCRVEIPAGIFKSGALWLKSDMTLNLQAGATLLGSE 221
>gi|300772072|ref|ZP_07081942.1| exo-poly-alpha-D-galacturonosidase [Sphingobacterium spiritivorum
ATCC 33861]
gi|300760375|gb|EFK57201.1| exo-poly-alpha-D-galacturonosidase [Sphingobacterium spiritivorum
ATCC 33861]
Length = 570
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 39/67 (58%), Gaps = 3/67 (4%)
Query: 82 MSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFL 141
+SI FG GDG + NT+A +A+ KGG + +P G+W+TG L SN L +
Sbjct: 60 ISIVRFGAQGDGISLNTQAINRAIAETS---QKGGGVVLIPAGVWVTGPIELKSNINLHI 116
Query: 142 ERGAVML 148
+R A++L
Sbjct: 117 QRDAILL 123
>gi|255533858|ref|YP_003094230.1| glycoside hydrolase family protein [Pedobacter heparinus DSM 2366]
gi|255346842|gb|ACU06168.1| glycoside hydrolase family 28 [Pedobacter heparinus DSM 2366]
Length = 543
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 46/82 (56%), Gaps = 4/82 (4%)
Query: 69 LLGDQYLPERKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLT 128
LG Y + +I DFG V DG T NT A +KA+ K G ++ +P+G++L+
Sbjct: 12 FLGFIYSCRTEKNFNILDFGAVRDGKTLNTAAIQKAIDECS----KKGGRVVIPKGVYLS 67
Query: 129 GSFNLTSNFTLFLERGAVMLGS 150
G+ + SN L +E GA++ GS
Sbjct: 68 GTLYMKSNVELHIEEGAILKGS 89
>gi|254392545|ref|ZP_05007723.1| glycoside hydrolase [Streptomyces clavuligerus ATCC 27064]
gi|197706210|gb|EDY52022.1| glycoside hydrolase [Streptomyces clavuligerus ATCC 27064]
Length = 462
Score = 53.1 bits (126), Expect = 3e-05, Method: Composition-based stats.
Identities = 30/76 (39%), Positives = 39/76 (51%), Gaps = 5/76 (6%)
Query: 75 LPERKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLT 134
P R+ I +G VGDG T NT AFR A+R GG ++ VP G +LTG+ L
Sbjct: 45 FPNRR--FDITRYGAVGDGVTKNTRAFRDAIRACH---RAGGGRVVVPRGRFLTGAIQLR 99
Query: 135 SNFTLFLERGAVMLGS 150
S L + G +L S
Sbjct: 100 SQVELHVREGGTVLFS 115
>gi|325106423|ref|YP_004276077.1| glycoside hydrolase family protein [Pedobacter saltans DSM 12145]
gi|324975271|gb|ADY54255.1| glycoside hydrolase family 28 [Pedobacter saltans DSM 12145]
Length = 482
Score = 53.1 bits (126), Expect = 3e-05, Method: Composition-based stats.
Identities = 30/74 (40%), Positives = 43/74 (58%), Gaps = 3/74 (4%)
Query: 78 RKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNF 137
+KV I D+G D T +TEA RKA+ + GG ++ VP+G +L+G +L SN
Sbjct: 51 KKVDYKITDYGASLDSTVKSTEAIRKAI---EACHTNGGGRVIVPKGTFLSGPIHLKSNV 107
Query: 138 TLFLERGAVMLGSQ 151
L LE GA +L S+
Sbjct: 108 NLHLEDGAKILFSR 121
>gi|307133005|ref|YP_003885021.1| Exo-poly-alpha-D-galacturonosidase [Dickeya dadantii 3937]
gi|306530534|gb|ADN00465.1| Exo-poly-alpha-D-galacturonosidase precursor [Dickeya dadantii
3937]
Length = 606
Score = 53.1 bits (126), Expect = 3e-05, Method: Composition-based stats.
Identities = 30/70 (42%), Positives = 41/70 (58%), Gaps = 5/70 (7%)
Query: 82 MSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFL 141
+ I +G G+GTT NT A +KA+ G Q+NVP G++ TG+ L SN TL L
Sbjct: 154 IDITRYGAKGNGTTLNTSAIQKAIDAC-----PSGCQVNVPAGVFKTGALWLKSNMTLNL 208
Query: 142 ERGAVMLGSQ 151
GA +LGS+
Sbjct: 209 SPGATLLGSE 218
>gi|9437305|emb|CAB99318.1| polygalacturonase [Erwinia chrysanthemi]
Length = 606
Score = 53.1 bits (126), Expect = 3e-05, Method: Composition-based stats.
Identities = 30/70 (42%), Positives = 41/70 (58%), Gaps = 5/70 (7%)
Query: 82 MSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFL 141
+ I +G G+GTT NT A +KA+ G Q+NVP G++ TG+ L SN TL L
Sbjct: 154 IDITRYGAKGNGTTLNTSAIQKAIDAC-----PSGCQVNVPAGVFKTGALWLKSNMTLNL 208
Query: 142 ERGAVMLGSQ 151
GA +LGS+
Sbjct: 209 SPGATLLGSE 218
>gi|154490368|ref|ZP_02030629.1| hypothetical protein PARMER_00601 [Parabacteroides merdae ATCC
43184]
gi|154088979|gb|EDN88023.1| polygalacturonase (pectinase) [Parabacteroides merdae ATCC 43184]
Length = 489
Score = 53.1 bits (126), Expect = 4e-05, Method: Composition-based stats.
Identities = 32/84 (38%), Positives = 49/84 (58%), Gaps = 7/84 (8%)
Query: 67 AGLLGDQYLPERKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLW 126
AG+L + + ++ M FG DGTT NT + +KA+ ++ + GG +L G +
Sbjct: 14 AGMLMPVWAKDYQMTM----FGIKSDGTTMNTRSIQKAIDFIS---ENGGGRLVFTVGRY 66
Query: 127 LTGSFNLTSNFTLFLERGAVMLGS 150
LTGS +L SN T+ L GAV++GS
Sbjct: 67 LTGSIHLKSNVTIHLGEGAVLVGS 90
>gi|238798891|ref|ZP_04642357.1| Exo-poly-alpha-D-galacturonosidase [Yersinia mollaretii ATCC 43969]
gi|238717245|gb|EEQ09095.1| Exo-poly-alpha-D-galacturonosidase [Yersinia mollaretii ATCC 43969]
Length = 604
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 44/70 (62%), Gaps = 5/70 (7%)
Query: 82 MSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFL 141
++++DFG + DG T NT+A ++A+ K G ++ +P G + +G+ L S+ TL L
Sbjct: 153 VNVRDFGAIADGKTLNTQAIQQAIDSC-----KPGCRVEIPSGTYKSGALWLKSDMTLHL 207
Query: 142 ERGAVMLGSQ 151
+ GA +LGS+
Sbjct: 208 QAGATLLGSE 217
>gi|423725590|ref|ZP_17699706.1| hypothetical protein HMPREF1078_03595 [Parabacteroides merdae
CL09T00C40]
gi|409234037|gb|EKN26868.1| hypothetical protein HMPREF1078_03595 [Parabacteroides merdae
CL09T00C40]
Length = 489
Score = 53.1 bits (126), Expect = 4e-05, Method: Composition-based stats.
Identities = 32/84 (38%), Positives = 49/84 (58%), Gaps = 7/84 (8%)
Query: 67 AGLLGDQYLPERKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLW 126
AG+L + + ++ M FG DGTT NT + +KA+ ++ + GG +L G +
Sbjct: 14 AGMLMPVWAKDYQMTM----FGIKSDGTTMNTRSIQKAIDFIS---ESGGGRLVFTVGRY 66
Query: 127 LTGSFNLTSNFTLFLERGAVMLGS 150
LTGS +L SN T+ L GAV++GS
Sbjct: 67 LTGSIHLKSNVTIHLGEGAVLVGS 90
>gi|423346857|ref|ZP_17324545.1| hypothetical protein HMPREF1060_02217 [Parabacteroides merdae
CL03T12C32]
gi|409219138|gb|EKN12102.1| hypothetical protein HMPREF1060_02217 [Parabacteroides merdae
CL03T12C32]
Length = 489
Score = 53.1 bits (126), Expect = 4e-05, Method: Composition-based stats.
Identities = 32/84 (38%), Positives = 49/84 (58%), Gaps = 7/84 (8%)
Query: 67 AGLLGDQYLPERKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLW 126
AG+L + + ++ M FG DGTT NT + +KA+ ++ + GG +L G +
Sbjct: 14 AGMLMPVWAKDYQMTM----FGIKSDGTTMNTRSIQKAIDFIS---ESGGGRLVFTVGRY 66
Query: 127 LTGSFNLTSNFTLFLERGAVMLGS 150
LTGS +L SN T+ L GAV++GS
Sbjct: 67 LTGSIHLKSNVTIHLGEGAVLVGS 90
>gi|294816001|ref|ZP_06774644.1| Pectate lyase [Streptomyces clavuligerus ATCC 27064]
gi|326444344|ref|ZP_08219078.1| glycoside hydrolase family 28 [Streptomyces clavuligerus ATCC
27064]
gi|294328600|gb|EFG10243.1| Pectate lyase [Streptomyces clavuligerus ATCC 27064]
Length = 477
Score = 53.1 bits (126), Expect = 4e-05, Method: Composition-based stats.
Identities = 30/76 (39%), Positives = 39/76 (51%), Gaps = 5/76 (6%)
Query: 75 LPERKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLT 134
P R+ I +G VGDG T NT AFR A+R GG ++ VP G +LTG+ L
Sbjct: 60 FPNRR--FDITRYGAVGDGVTKNTRAFRDAIRACH---RAGGGRVVVPRGRFLTGAIQLR 114
Query: 135 SNFTLFLERGAVMLGS 150
S L + G +L S
Sbjct: 115 SQVELHVREGGTVLFS 130
>gi|398798886|ref|ZP_10558183.1| endopolygalacturonase [Pantoea sp. GM01]
gi|398099709|gb|EJL89961.1| endopolygalacturonase [Pantoea sp. GM01]
Length = 442
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 41/69 (59%), Gaps = 3/69 (4%)
Query: 82 MSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFL 141
+S+ DF V DG T +T F++A+ ++ +GG L+VP G + G+ +L SN L L
Sbjct: 3 LSLADFYPVADGETLDTSCFQRALDHLAA---RGGGTLSVPPGRYHLGTLSLGSNIHLHL 59
Query: 142 ERGAVMLGS 150
E GA +L S
Sbjct: 60 EAGATLLAS 68
>gi|395804712|ref|ZP_10483947.1| glycoside hydrolase [Flavobacterium sp. F52]
gi|395433100|gb|EJF99058.1| glycoside hydrolase [Flavobacterium sp. F52]
Length = 509
Score = 53.1 bits (126), Expect = 4e-05, Method: Composition-based stats.
Identities = 29/67 (43%), Positives = 39/67 (58%), Gaps = 3/67 (4%)
Query: 84 IKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFLER 143
IK +G VGDG T NT+A +KA+ G ++ +G +L+GS L SN LF E
Sbjct: 26 IKKYGAVGDGKTLNTKAIQKAI---DAANKSKGGRILFSKGTFLSGSIVLKSNVELFFEE 82
Query: 144 GAVMLGS 150
AV+LGS
Sbjct: 83 DAVLLGS 89
>gi|345013580|ref|YP_004815934.1| glycoside hydrolase [Streptomyces violaceusniger Tu 4113]
gi|344039929|gb|AEM85654.1| glycoside hydrolase family 28 [Streptomyces violaceusniger Tu 4113]
Length = 484
Score = 52.8 bits (125), Expect = 4e-05, Method: Composition-based stats.
Identities = 30/73 (41%), Positives = 39/73 (53%), Gaps = 5/73 (6%)
Query: 75 LPERKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLT 134
P R + I D+G VGDG T NT AFR + GG Q+ VPEG +LTG+ +L
Sbjct: 63 FPRR--SFRITDYGAVGDGRTMNTAAFRATIAACH---RAGGGQVVVPEGRFLTGAIHLR 117
Query: 135 SNFTLFLERGAVM 147
S L + GA +
Sbjct: 118 SRVNLHVTAGATI 130
>gi|336415457|ref|ZP_08595796.1| hypothetical protein HMPREF1017_02904 [Bacteroides ovatus
3_8_47FAA]
gi|335940336|gb|EGN02203.1| hypothetical protein HMPREF1017_02904 [Bacteroides ovatus
3_8_47FAA]
Length = 461
Score = 52.8 bits (125), Expect = 4e-05, Method: Composition-based stats.
Identities = 26/64 (40%), Positives = 34/64 (53%), Gaps = 3/64 (4%)
Query: 84 IKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFLER 143
I DFG V G NT+A A+ + GG ++ VP G WLTG + SN L+LE
Sbjct: 55 ITDFGAVNGGRVDNTKAITSAI---EACNQSGGGRVVVPAGTWLTGPIHFKSNVNLYLEE 111
Query: 144 GAVM 147
AV+
Sbjct: 112 NAVL 115
>gi|299148459|ref|ZP_07041521.1| putative exo-poly-alpha-D-galacturonosidase [Bacteroides sp.
3_1_23]
gi|298513220|gb|EFI37107.1| putative exo-poly-alpha-D-galacturonosidase [Bacteroides sp.
3_1_23]
Length = 461
Score = 52.8 bits (125), Expect = 4e-05, Method: Composition-based stats.
Identities = 26/64 (40%), Positives = 34/64 (53%), Gaps = 3/64 (4%)
Query: 84 IKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFLER 143
I DFG V G NT+A A+ + GG ++ VP G WLTG + SN L+LE
Sbjct: 55 ITDFGAVNGGRVDNTKAITSAI---EACNQSGGGRVVVPAGTWLTGPIHFKSNVNLYLEE 111
Query: 144 GAVM 147
AV+
Sbjct: 112 NAVL 115
>gi|293370067|ref|ZP_06616633.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CMC 3f]
gi|292634859|gb|EFF53382.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CMC 3f]
Length = 461
Score = 52.8 bits (125), Expect = 4e-05, Method: Composition-based stats.
Identities = 26/64 (40%), Positives = 34/64 (53%), Gaps = 3/64 (4%)
Query: 84 IKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFLER 143
I DFG V G NT+A A+ + GG ++ VP G WLTG + SN L+LE
Sbjct: 55 ITDFGAVNGGRVDNTKAITSAI---EACNQSGGGRVVVPAGTWLTGPIHFKSNVNLYLEE 111
Query: 144 GAVM 147
AV+
Sbjct: 112 NAVL 115
>gi|160886940|ref|ZP_02067943.1| hypothetical protein BACOVA_04954 [Bacteroides ovatus ATCC 8483]
gi|237721224|ref|ZP_04551705.1| pectate lyase [Bacteroides sp. 2_2_4]
gi|423288954|ref|ZP_17267805.1| hypothetical protein HMPREF1069_02848 [Bacteroides ovatus
CL02T12C04]
gi|423294898|ref|ZP_17273025.1| hypothetical protein HMPREF1070_01690 [Bacteroides ovatus
CL03T12C18]
gi|156107351|gb|EDO09096.1| polygalacturonase (pectinase) [Bacteroides ovatus ATCC 8483]
gi|229449020|gb|EEO54811.1| pectate lyase [Bacteroides sp. 2_2_4]
gi|392668718|gb|EIY62212.1| hypothetical protein HMPREF1069_02848 [Bacteroides ovatus
CL02T12C04]
gi|392676089|gb|EIY69530.1| hypothetical protein HMPREF1070_01690 [Bacteroides ovatus
CL03T12C18]
Length = 461
Score = 52.8 bits (125), Expect = 4e-05, Method: Composition-based stats.
Identities = 26/64 (40%), Positives = 34/64 (53%), Gaps = 3/64 (4%)
Query: 84 IKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFLER 143
I DFG V G NT+A A+ + GG ++ VP G WLTG + SN L+LE
Sbjct: 55 ITDFGAVNGGRVDNTKAITSAI---EACNQSGGGRVVVPAGTWLTGPIHFKSNVNLYLEE 111
Query: 144 GAVM 147
AV+
Sbjct: 112 NAVL 115
>gi|238789354|ref|ZP_04633140.1| Exo-poly-alpha-D-galacturonosidase [Yersinia frederiksenii ATCC
33641]
gi|238722497|gb|EEQ14151.1| Exo-poly-alpha-D-galacturonosidase [Yersinia frederiksenii ATCC
33641]
Length = 596
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 45/70 (64%), Gaps = 5/70 (7%)
Query: 82 MSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFL 141
++++DFG V DG T NT+A ++A+ K G ++ +P G++ +G+ L S+ TL L
Sbjct: 145 VNVRDFGAVDDGKTLNTKAIQQAIDSC-----KPGCRIEIPAGIYKSGALWLKSDMTLNL 199
Query: 142 ERGAVMLGSQ 151
+ GA +LGS+
Sbjct: 200 QAGATLLGSE 209
>gi|291615877|ref|YP_003518619.1| Pgl [Pantoea ananatis LMG 20103]
gi|378769045|ref|YP_005197520.1| polygalacturonase [Pantoea ananatis LMG 5342]
gi|386018057|ref|YP_005936358.1| polygalacturonase Pgl [Pantoea ananatis AJ13355]
gi|386081132|ref|YP_005994657.1| polygalacturonase Pgl [Pantoea ananatis PA13]
gi|291150907|gb|ADD75491.1| Pgl [Pantoea ananatis LMG 20103]
gi|327396140|dbj|BAK13562.1| polygalacturonase Pgl [Pantoea ananatis AJ13355]
gi|354990313|gb|AER34437.1| polygalacturonase Pgl [Pantoea ananatis PA13]
gi|365188533|emb|CCF11483.1| polygalacturonase [Pantoea ananatis LMG 5342]
Length = 443
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 41/70 (58%), Gaps = 3/70 (4%)
Query: 82 MSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFL 141
+S+ DF V DG T +T ++A+ + GG +L +P G + +G NL S+F L L
Sbjct: 3 LSLGDFHPVADGETPDTRILQQAIDQIAA---AGGGRLTLPPGRYRSGCLNLPSDFELHL 59
Query: 142 ERGAVMLGSQ 151
E GAV++ S+
Sbjct: 60 EAGAVLVASR 69
>gi|189467900|ref|ZP_03016685.1| hypothetical protein BACINT_04292 [Bacteroides intestinalis DSM
17393]
gi|189436164|gb|EDV05149.1| FG-GAP repeat protein [Bacteroides intestinalis DSM 17393]
Length = 1068
Score = 52.8 bits (125), Expect = 5e-05, Method: Composition-based stats.
Identities = 28/73 (38%), Positives = 40/73 (54%), Gaps = 5/73 (6%)
Query: 75 LPERKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLT 134
P R SI ++G V G T NT+A KA++ GG ++ +P G WLTG +L
Sbjct: 50 FPNRD--FSIANYGAVKGGKTINTKAIAKAIK---ACNKAGGGRVVIPAGEWLTGPVHLM 104
Query: 135 SNFTLFLERGAVM 147
SN L+L GA++
Sbjct: 105 SNVNLYLSDGAIL 117
>gi|218259493|ref|ZP_03475216.1| hypothetical protein PRABACTJOHN_00874 [Parabacteroides johnsonii
DSM 18315]
gi|218225086|gb|EEC97736.1| hypothetical protein PRABACTJOHN_00874 [Parabacteroides johnsonii
DSM 18315]
Length = 494
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 42/86 (48%), Gaps = 11/86 (12%)
Query: 65 CAAGLLGDQYLPERKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEG 124
C A L Y DFG + DG T NT + +K + ++ G G +L G
Sbjct: 16 CVASLSAKDYYA--------TDFGVIADGKTLNTNSIQKGIDFVNKLG---GGRLVFTAG 64
Query: 125 LWLTGSFNLTSNFTLFLERGAVMLGS 150
+LTGS L SN TL LE GA +LGS
Sbjct: 65 NYLTGSIYLKSNVTLHLEEGATLLGS 90
>gi|218259507|ref|ZP_03475220.1| hypothetical protein PRABACTJOHN_00878 [Parabacteroides johnsonii
DSM 18315]
gi|218225038|gb|EEC97688.1| hypothetical protein PRABACTJOHN_00878 [Parabacteroides johnsonii
DSM 18315]
Length = 489
Score = 52.4 bits (124), Expect = 5e-05, Method: Composition-based stats.
Identities = 28/64 (43%), Positives = 40/64 (62%), Gaps = 3/64 (4%)
Query: 87 FGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFLERGAV 146
FG DGTT NT + +KA+ ++ + GG +L G +LTGS +L SN T+ L GAV
Sbjct: 30 FGIKSDGTTMNTRSIQKAIDFIS---ENGGGRLVFTVGRYLTGSIHLKSNVTIHLGEGAV 86
Query: 147 MLGS 150
++GS
Sbjct: 87 LVGS 90
>gi|423342234|ref|ZP_17319948.1| hypothetical protein HMPREF1077_01378 [Parabacteroides johnsonii
CL02T12C29]
gi|409218148|gb|EKN11120.1| hypothetical protein HMPREF1077_01378 [Parabacteroides johnsonii
CL02T12C29]
Length = 489
Score = 52.4 bits (124), Expect = 6e-05, Method: Composition-based stats.
Identities = 28/64 (43%), Positives = 40/64 (62%), Gaps = 3/64 (4%)
Query: 87 FGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFLERGAV 146
FG DGTT NT + +KA+ ++ + GG +L G +LTGS +L SN T+ L GAV
Sbjct: 30 FGIKSDGTTMNTRSIQKAIDFIS---ENGGGRLVFTVGRYLTGSIHLKSNVTIHLGEGAV 86
Query: 147 MLGS 150
++GS
Sbjct: 87 LVGS 90
>gi|224137954|ref|XP_002322693.1| predicted protein [Populus trichocarpa]
gi|222867323|gb|EEF04454.1| predicted protein [Populus trichocarpa]
Length = 445
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 37/69 (53%)
Query: 81 AMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLF 140
+S+ DFG +GDG +TEA + + +N P G++LT + +L SN L
Sbjct: 12 TLSVTDFGAIGDGIHYDTEAIQSTINSCPTTPPTKACHVNFPPGIYLTATIHLKSNVVLN 71
Query: 141 LERGAVMLG 149
++ GA +LG
Sbjct: 72 IQEGATLLG 80
>gi|359404678|ref|ZP_09197503.1| hypothetical protein HMPREF0673_00710, partial [Prevotella
stercorea DSM 18206]
gi|357560078|gb|EHJ41487.1| hypothetical protein HMPREF0673_00710, partial [Prevotella
stercorea DSM 18206]
Length = 252
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 44/73 (60%), Gaps = 4/73 (5%)
Query: 80 VAMSIKDFGGVGDG-TTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFT 138
+ +SI FG VG+ + +N EA +A+ + ++GG ++ VP G + TGS L S
Sbjct: 8 IVVSIASFGAVGNNESVNNAEAINRAIEHC---AEQGGGRVVVPCGEYYTGSIYLKSGVM 64
Query: 139 LFLERGAVMLGSQ 151
LFLE+GAV+ G Q
Sbjct: 65 LFLEQGAVLKGVQ 77
>gi|332299163|ref|YP_004441085.1| Polygalacturonase [Treponema brennaborense DSM 12168]
gi|332182266|gb|AEE17954.1| Polygalacturonase [Treponema brennaborense DSM 12168]
Length = 449
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 37/66 (56%), Gaps = 3/66 (4%)
Query: 82 MSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFL 141
+++K+FG DG +N AF +AV + + GG L VP G+W TG L + TL L
Sbjct: 4 LNLKNFGAKADGIYNNAAAFAEAVSVLH---EAGGGTLTVPAGIWKTGPIRLCAKMTLHL 60
Query: 142 ERGAVM 147
GAV+
Sbjct: 61 AEGAVL 66
>gi|212695103|ref|ZP_03303231.1| hypothetical protein BACDOR_04641 [Bacteroides dorei DSM 17855]
gi|212662419|gb|EEB22993.1| polygalacturonase (pectinase) [Bacteroides dorei DSM 17855]
Length = 532
Score = 52.4 bits (124), Expect = 6e-05, Method: Composition-based stats.
Identities = 28/68 (41%), Positives = 45/68 (66%), Gaps = 5/68 (7%)
Query: 83 SIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFLE 142
+IKDFG VGDG + +T+A ++A+ +K G + VP+G++LTG+ S TL++E
Sbjct: 119 NIKDFGAVGDGKSLDTKAIQQAIDAC----NKQGIVV-VPKGVYLTGALFFKSYMTLYIE 173
Query: 143 RGAVMLGS 150
GA++ GS
Sbjct: 174 EGAILKGS 181
>gi|255523559|ref|ZP_05390527.1| glycoside hydrolase family 28 [Clostridium carboxidivorans P7]
gi|296186479|ref|ZP_06854882.1| polygalacturonase (pectinase) [Clostridium carboxidivorans P7]
gi|255512816|gb|EET89088.1| glycoside hydrolase family 28 [Clostridium carboxidivorans P7]
gi|296048926|gb|EFG88357.1| polygalacturonase (pectinase) [Clostridium carboxidivorans P7]
Length = 532
Score = 52.4 bits (124), Expect = 6e-05, Method: Composition-based stats.
Identities = 27/68 (39%), Positives = 39/68 (57%), Gaps = 3/68 (4%)
Query: 83 SIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFLE 142
+I D+G T NT+AF+KA+ G G ++ VP G WLTG L SN L+L+
Sbjct: 65 NITDYGAESGSITKNTDAFKKAITECNKVG---GGRVVVPAGTWLTGPIELKSNVNLYLD 121
Query: 143 RGAVMLGS 150
GA+++ S
Sbjct: 122 SGALVIFS 129
>gi|406667543|ref|ZP_11075299.1| Exo-poly-alpha-D-galacturonosidase precursor [Bacillus isronensis
B3W22]
gi|405384596|gb|EKB44039.1| Exo-poly-alpha-D-galacturonosidase precursor [Bacillus isronensis
B3W22]
Length = 448
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 41/69 (59%), Gaps = 3/69 (4%)
Query: 83 SIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFLE 142
+I+ FG VGDG +NT A ++AV + GG + VP G+++TG+ L SN L LE
Sbjct: 9 NIEQFGAVGDGWANNTSAIKRAV---EACSQGGGGTVYVPAGVFVTGAIELKSNMHLHLE 65
Query: 143 RGAVMLGSQ 151
G+ +L S
Sbjct: 66 AGSELLFSN 74
>gi|398793179|ref|ZP_10553653.1| endopolygalacturonase [Pantoea sp. YR343]
gi|398211246|gb|EJM97867.1| endopolygalacturonase [Pantoea sp. YR343]
Length = 442
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 40/69 (57%), Gaps = 3/69 (4%)
Query: 82 MSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFL 141
+S+ DF + DG T +T F++A+ ++ +GG L+VP G + G+ L SN L L
Sbjct: 3 VSLADFYPIADGETLDTYCFQRALNHL---ASRGGGTLSVPPGRYHLGTLTLGSNINLHL 59
Query: 142 ERGAVMLGS 150
E GA +L S
Sbjct: 60 EAGATLLAS 68
>gi|374309036|ref|YP_005055466.1| glycoside hydrolase family protein [Granulicella mallensis
MP5ACTX8]
gi|358751046|gb|AEU34436.1| glycoside hydrolase family 28 [Granulicella mallensis MP5ACTX8]
Length = 471
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 46/79 (58%), Gaps = 3/79 (3%)
Query: 72 DQYLPERKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSF 131
+ LP+ V ++++DFG VGDG T +T A ++ + GG ++ VP G +LTG+
Sbjct: 47 ESVLPKPVVKLNVRDFGAVGDGKTKDTLALQQTLDRCSLL---GGGEVFVPAGEYLTGAL 103
Query: 132 NLTSNFTLFLERGAVMLGS 150
L SN L L+ A +LGS
Sbjct: 104 VLRSNTLLRLDGDASLLGS 122
>gi|399028582|ref|ZP_10729769.1| endopolygalacturonase [Flavobacterium sp. CF136]
gi|398073673|gb|EJL64837.1| endopolygalacturonase [Flavobacterium sp. CF136]
Length = 528
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 42/67 (62%), Gaps = 3/67 (4%)
Query: 84 IKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFLER 143
I ++G DG T NT A +KA+ F +KGG + P+G +L+GS L SN TL+ E
Sbjct: 38 ITEYGSKADGKTINTIAIQKAID--AAFKNKGGRVI-FPKGKFLSGSIILKSNVTLYFEE 94
Query: 144 GAVMLGS 150
G+V+LGS
Sbjct: 95 GSVLLGS 101
>gi|227536102|ref|ZP_03966151.1| pectin lyase [Sphingobacterium spiritivorum ATCC 33300]
gi|227243999|gb|EEI94014.1| pectin lyase [Sphingobacterium spiritivorum ATCC 33300]
Length = 577
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 39/67 (58%), Gaps = 3/67 (4%)
Query: 82 MSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFL 141
+SI FG GDG + NT++ +A+ KGG + +P G+W+TG L SN L +
Sbjct: 67 ISIVRFGAQGDGISLNTQSINRAIAET---SQKGGGVVLIPAGVWVTGPIELKSNINLHI 123
Query: 142 ERGAVML 148
+R A++L
Sbjct: 124 QRDAILL 130
>gi|420261144|ref|ZP_14763801.1| exo-poly-alpha-D-galacturonosidase [Yersinia enterocolitica subsp.
enterocolitica WA-314]
gi|404511433|gb|EKA25311.1| exo-poly-alpha-D-galacturonosidase [Yersinia enterocolitica subsp.
enterocolitica WA-314]
Length = 608
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 45/70 (64%), Gaps = 5/70 (7%)
Query: 82 MSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFL 141
++++DFG + DG T NT+A ++A+ K G ++ +P G + +G+ L S+ TL L
Sbjct: 157 VNVRDFGAIDDGKTLNTKAIQQAIDSC-----KPGCRVEIPAGTYKSGALWLKSDMTLNL 211
Query: 142 ERGAVMLGSQ 151
+ GA++LGS+
Sbjct: 212 QAGAILLGSE 221
>gi|123440561|ref|YP_001004555.1| exo-poly-alpha-D-galacturonosidase [Yersinia enterocolitica subsp.
enterocolitica 8081]
gi|122087522|emb|CAL10303.1| exo-poly-alpha-D-galacturonosidase precursor [Yersinia
enterocolitica subsp. enterocolitica 8081]
Length = 608
Score = 52.0 bits (123), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 45/70 (64%), Gaps = 5/70 (7%)
Query: 82 MSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFL 141
++++DFG + DG T NT+A ++A+ K G ++ +P G + +G+ L S+ TL L
Sbjct: 157 VNVRDFGAIDDGKTLNTKAIQQAIDSC-----KPGCRVEIPAGTYKSGALWLKSDMTLNL 211
Query: 142 ERGAVMLGSQ 151
+ GA++LGS+
Sbjct: 212 QAGAILLGSE 221
>gi|149243741|pdb|2UVE|A Chain A, Structure Of Yersinia Enterocolitica Family 28
Exopolygalacturonase
gi|149243742|pdb|2UVE|B Chain B, Structure Of Yersinia Enterocolitica Family 28
Exopolygalacturonase
gi|149243745|pdb|2UVF|A Chain A, Structure Of Yersinia Enterocolitica Family 28
Exopolygalacturonase In Complex With Digalaturonic Acid
gi|149243746|pdb|2UVF|B Chain B, Structure Of Yersinia Enterocolitica Family 28
Exopolygalacturonase In Complex With Digalaturonic Acid
Length = 608
Score = 52.0 bits (123), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 45/70 (64%), Gaps = 5/70 (7%)
Query: 82 MSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFL 141
++++DFG + DG T NT+A ++A+ K G ++ +P G + +G+ L S+ TL L
Sbjct: 157 VNVRDFGAIDDGKTLNTKAIQQAIDSC-----KPGCRVEIPAGTYKSGALWLKSDMTLNL 211
Query: 142 ERGAVMLGSQ 151
+ GA++LGS+
Sbjct: 212 QAGAILLGSE 221
>gi|3089553|gb|AAC15064.1| exopolygalacturonase [Yersinia enterocolitica]
Length = 601
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 45/70 (64%), Gaps = 5/70 (7%)
Query: 82 MSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFL 141
++++DFG + DG T NT+A ++A+ K G ++ +P G + +G+ L S+ TL L
Sbjct: 157 VNVRDFGAIDDGKTLNTKAIQQAIDSC-----KPGCRVEIPAGTYKSGALWLKSDMTLNL 211
Query: 142 ERGAVMLGSQ 151
+ GA++LGS+
Sbjct: 212 QAGAILLGSE 221
>gi|451341085|ref|ZP_21911561.1| Polygalacturonase [Amycolatopsis azurea DSM 43854]
gi|449416100|gb|EMD21877.1| Polygalacturonase [Amycolatopsis azurea DSM 43854]
Length = 451
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 41/73 (56%), Gaps = 5/73 (6%)
Query: 75 LPERKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLT 134
P+R S+ DFG GDG T N+ A +K + +GG + VP+G ++TG+ L
Sbjct: 50 FPDR--TFSVLDFGAKGDGKTDNSAAIKKTIETANA---RGGGHVVVPKGTFVTGAVYLK 104
Query: 135 SNFTLFLERGAVM 147
SN L L+ GAV+
Sbjct: 105 SNVDLHLDAGAVL 117
>gi|354595733|ref|ZP_09013750.1| Exo-poly-alpha-galacturonosidase [Brenneria sp. EniD312]
gi|353673668|gb|EHD19701.1| Exo-poly-alpha-galacturonosidase [Brenneria sp. EniD312]
Length = 605
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 43/70 (61%), Gaps = 5/70 (7%)
Query: 82 MSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFL 141
++I +FG DG T NT A ++A+ K G +++VP G++ TG+ L S+ TL L
Sbjct: 153 VNINEFGAKADGNTLNTAAIQQAIDAC-----KPGCRVDVPRGIYKTGALWLKSDMTLNL 207
Query: 142 ERGAVMLGSQ 151
+ GAV+LGS
Sbjct: 208 QDGAVLLGSD 217
>gi|414071001|ref|ZP_11406978.1| glycoside hydrolase [Pseudoalteromonas sp. Bsw20308]
gi|410806622|gb|EKS12611.1| glycoside hydrolase [Pseudoalteromonas sp. Bsw20308]
Length = 489
Score = 52.0 bits (123), Expect = 9e-05, Method: Composition-based stats.
Identities = 25/65 (38%), Positives = 40/65 (61%), Gaps = 3/65 (4%)
Query: 83 SIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFLE 142
+I DFG G+ T+NT A A++ +GG Q+ +P+G ++TG+ +L SN L LE
Sbjct: 64 NIIDFGANGNNKTNNTVAINNAIKSCNA---QGGGQVIIPQGQFITGAIHLLSNVNLHLE 120
Query: 143 RGAVM 147
GA++
Sbjct: 121 EGAIL 125
>gi|356533465|ref|XP_003535284.1| PREDICTED: uncharacterized protein LOC100813746 [Glycine max]
Length = 398
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 25/49 (51%), Positives = 32/49 (65%)
Query: 78 RKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLW 126
RK + + DFGGVGDG TSNT+AF+ A+ + + GGA L VP G W
Sbjct: 135 RKHSAVLTDFGGVGDGKTSNTKAFQYAISNLSHYAFDGGALLVVPPGKW 183
>gi|212695092|ref|ZP_03303220.1| hypothetical protein BACDOR_04630 [Bacteroides dorei DSM 17855]
gi|212662408|gb|EEB22982.1| hypothetical protein BACDOR_04630 [Bacteroides dorei DSM 17855]
Length = 475
Score = 52.0 bits (123), Expect = 9e-05, Method: Composition-based stats.
Identities = 29/73 (39%), Positives = 37/73 (50%), Gaps = 5/73 (6%)
Query: 75 LPERKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLT 134
PER SI D+G V G NTEA KA+ GG ++ +P G WLTGS +
Sbjct: 49 FPERD--FSIVDYGAVEGGKQKNTEAIAKAI---DACNKAGGGRVVIPAGEWLTGSIHFK 103
Query: 135 SNFTLFLERGAVM 147
SN L L A++
Sbjct: 104 SNVNLHLAENAIV 116
>gi|115471367|ref|NP_001059282.1| Os07g0245200 [Oryza sativa Japonica Group]
gi|34393209|dbj|BAC82923.1| putative polygalacturonase [Oryza sativa Japonica Group]
gi|113610818|dbj|BAF21196.1| Os07g0245200 [Oryza sativa Japonica Group]
Length = 446
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 24/39 (61%), Positives = 31/39 (79%)
Query: 113 DKGGAQLNVPEGLWLTGSFNLTSNFTLFLERGAVMLGSQ 151
+KGGA+L VP G WLTGSFNL S+ T+ L+ AV++GSQ
Sbjct: 44 NKGGAELFVPAGRWLTGSFNLISHLTVSLDADAVIIGSQ 82
>gi|403744854|ref|ZP_10953930.1| glycoside hydrolase family 28 [Alicyclobacillus hesperidum
URH17-3-68]
gi|403121782|gb|EJY56052.1| glycoside hydrolase family 28 [Alicyclobacillus hesperidum
URH17-3-68]
Length = 865
Score = 52.0 bits (123), Expect = 9e-05, Method: Composition-based stats.
Identities = 27/69 (39%), Positives = 42/69 (60%), Gaps = 5/69 (7%)
Query: 82 MSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFL 141
+++K FG +GDG + +T A ++A+ + KGG L VP G + T L S+ TL+L
Sbjct: 132 VNVKQFGAIGDGKSDDTRALQRAIDAVP----KGGT-LYVPAGTYYTAPLQLKSDMTLYL 186
Query: 142 ERGAVMLGS 150
+GA +LGS
Sbjct: 187 AKGATLLGS 195
>gi|237721299|ref|ZP_04551780.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. 2_2_4]
gi|229449095|gb|EEO54886.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. 2_2_4]
Length = 539
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 41/67 (61%), Gaps = 3/67 (4%)
Query: 82 MSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFL 141
++I+ FG GDG NT+A A++ + GG ++ +PEG+WLTG L SN L+
Sbjct: 60 VNIEKFGAKGDGLFLNTKAINDAIKDVN---QHGGGKVIIPEGIWLTGPIELLSNVNLYT 116
Query: 142 ERGAVML 148
++ A++L
Sbjct: 117 KQNALVL 123
>gi|393201099|ref|YP_006462941.1| endopolygalacturonase [Solibacillus silvestris StLB046]
gi|327440430|dbj|BAK16795.1| endopolygalacturonase [Solibacillus silvestris StLB046]
Length = 449
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 41/69 (59%), Gaps = 3/69 (4%)
Query: 83 SIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFLE 142
+I+ FG VGDG +NT A ++AV + GG + VP G+++TG+ + SN L LE
Sbjct: 10 NIEQFGAVGDGWANNTSAIKRAV---EACSQGGGGTIYVPAGVFVTGAIEMKSNMHLHLE 66
Query: 143 RGAVMLGSQ 151
G+ +L S
Sbjct: 67 AGSELLFSN 75
>gi|436837106|ref|YP_007322322.1| glycoside hydrolase family 28 [Fibrella aestuarina BUZ 2]
gi|384068519|emb|CCH01729.1| glycoside hydrolase family 28 [Fibrella aestuarina BUZ 2]
Length = 777
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 39/71 (54%), Gaps = 5/71 (7%)
Query: 78 RKVAMSIKDFGGVGDGTTSNTEAFRKAV-RYMQGFGDKGGAQLNVPEGLWLTGSFNLTSN 136
RK +I +G DG T NT+A +A+ R Q GG + +PEGLWLTG L SN
Sbjct: 266 RKDTFNIARYGSKADGITLNTQAINQAITRCSQA----GGGTVLIPEGLWLTGPLVLRSN 321
Query: 137 FTLFLERGAVM 147
L L GA++
Sbjct: 322 VNLHLASGALL 332
>gi|295132878|ref|YP_003583554.1| glycoside hydrolase [Zunongwangia profunda SM-A87]
gi|294980893|gb|ADF51358.1| glycoside hydrolase family protein [Zunongwangia profunda SM-A87]
Length = 470
Score = 51.6 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 27/66 (40%), Positives = 40/66 (60%), Gaps = 4/66 (6%)
Query: 83 SIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGL-WLTGSFNLTSNFTLFL 141
+I+DFG V D T+N+ + +K + Y G G ++ +P G +L+G FNL SN L L
Sbjct: 5 NIQDFGAVNDDFTNNSVSIQKTIDYCAALG---GGKVVIPAGKPYLSGPFNLKSNIELHL 61
Query: 142 ERGAVM 147
E GAV+
Sbjct: 62 EHGAVL 67
>gi|354581296|ref|ZP_09000200.1| glycoside hydrolase family 28 [Paenibacillus lactis 154]
gi|353201624|gb|EHB67077.1| glycoside hydrolase family 28 [Paenibacillus lactis 154]
Length = 522
Score = 51.6 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 28/77 (36%), Positives = 41/77 (53%), Gaps = 5/77 (6%)
Query: 75 LPERKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLT 134
+PE V I D+G VGDG NT AF +A+ + GG ++ +P G+W TG L
Sbjct: 15 IPEYTVM--ITDYGAVGDGVYDNTLAFHQAI---EACAKAGGGKVVIPPGIWHTGPLTLQ 69
Query: 135 SNFTLFLERGAVMLGSQ 151
S L GA+++ S+
Sbjct: 70 SRIELHASAGALVMFSK 86
>gi|271502414|ref|YP_003335440.1| glycoside hydrolase family 28 [Dickeya dadantii Ech586]
gi|270345969|gb|ACZ78734.1| glycoside hydrolase family 28 [Dickeya dadantii Ech586]
Length = 604
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 42/69 (60%), Gaps = 5/69 (7%)
Query: 82 MSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFL 141
++I +G GDGTT NT A +KA+ G +++VP G++ TG+ L SN TL L
Sbjct: 154 INITQYGAKGDGTTLNTSAIQKAIDAC-----PTGCRIDVPAGIFKTGALWLKSNMTLNL 208
Query: 142 ERGAVMLGS 150
+GA +LGS
Sbjct: 209 LQGATLLGS 217
>gi|418242061|ref|ZP_12868579.1| exo-poly-alpha-D-galacturonosidase precursor [Yersinia
enterocolitica subsp. palearctica PhRBD_Ye1]
gi|351778508|gb|EHB20659.1| exo-poly-alpha-D-galacturonosidase precursor [Yersinia
enterocolitica subsp. palearctica PhRBD_Ye1]
Length = 608
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 46/74 (62%), Gaps = 5/74 (6%)
Query: 78 RKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNF 137
R ++++DFG + DG T NT+A ++A+ K G ++ +P G + +G+ L S+
Sbjct: 153 RPQIVNVRDFGVIDDGKTLNTKAIQQAIDSC-----KPGCRVEIPAGTYKSGALWLKSDM 207
Query: 138 TLFLERGAVMLGSQ 151
TL L+ GA++LGS+
Sbjct: 208 TLNLQAGAILLGSE 221
>gi|386310805|ref|YP_006006861.1| exo-poly-alpha-D-galacturonosidase [Yersinia enterocolitica subsp.
palearctica Y11]
gi|433551770|ref|ZP_20507811.1| Exo-poly-alpha-D-galacturonosidase precursor [Yersinia
enterocolitica IP 10393]
gi|318607670|emb|CBY29168.1| exo-poly-alpha-D-galacturonosidase precursor [Yersinia
enterocolitica subsp. palearctica Y11]
gi|431787439|emb|CCO70851.1| Exo-poly-alpha-D-galacturonosidase precursor [Yersinia
enterocolitica IP 10393]
Length = 623
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 46/74 (62%), Gaps = 5/74 (6%)
Query: 78 RKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNF 137
R ++++DFG + DG T NT+A ++A+ K G ++ +P G + +G+ L S+
Sbjct: 168 RPQIVNVRDFGVIDDGKTLNTKAIQQAIDSC-----KPGCRVEIPAGTYKSGALWLKSDM 222
Query: 138 TLFLERGAVMLGSQ 151
TL L+ GA++LGS+
Sbjct: 223 TLNLQAGAILLGSE 236
>gi|224536550|ref|ZP_03677089.1| hypothetical protein BACCELL_01425 [Bacteroides cellulosilyticus
DSM 14838]
gi|224521806|gb|EEF90911.1| hypothetical protein BACCELL_01425 [Bacteroides cellulosilyticus
DSM 14838]
Length = 462
Score = 51.2 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 27/65 (41%), Positives = 36/65 (55%), Gaps = 4/65 (6%)
Query: 84 IKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEG-LWLTGSFNLTSNFTLFLE 142
I DFG VGDG T EAF KA+ D GG ++ VP G ++ G SN + LE
Sbjct: 49 ITDFGAVGDGKTLCKEAFEKAITICS---DNGGGKITVPAGTYYMNGPLVFKSNVNVHLE 105
Query: 143 RGAVM 147
+GA++
Sbjct: 106 KGAIL 110
>gi|421078108|ref|ZP_15539067.1| glycoside hydrolase family 28 [Pelosinus fermentans JBW45]
gi|392523693|gb|EIW46860.1| glycoside hydrolase family 28 [Pelosinus fermentans JBW45]
Length = 453
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 41/77 (53%), Gaps = 5/77 (6%)
Query: 75 LPERKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLT 134
P R ++ DFG VGDG T+AFR R M GG ++ VP G++LTG +
Sbjct: 33 FPRRDFVVT--DFGAVGDGIMDCTDAFR---RVMMAANTAGGGRVVVPAGIYLTGPIHFK 87
Query: 135 SNFTLFLERGAVMLGSQ 151
SN L++ + A + SQ
Sbjct: 88 SNVNLYVSKEATVKFSQ 104
>gi|146300860|ref|YP_001195451.1| glycoside hydrolase [Flavobacterium johnsoniae UW101]
gi|146155278|gb|ABQ06132.1| Polygalacturonase-like protein; Glycoside hydrolase family 28
[Flavobacterium johnsoniae UW101]
Length = 509
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 41/70 (58%), Gaps = 3/70 (4%)
Query: 81 AMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLF 140
IK +G VGDG T NT+A +KA+ KGG L +G +L+GS L S+ LF
Sbjct: 23 VFDIKKYGAVGDGKTLNTKAIQKAIDAANK--SKGGKVL-FSKGTFLSGSIVLKSDVELF 79
Query: 141 LERGAVMLGS 150
E GA++LGS
Sbjct: 80 FEEGAILLGS 89
>gi|224536009|ref|ZP_03676548.1| hypothetical protein BACCELL_00873 [Bacteroides cellulosilyticus
DSM 14838]
gi|224522376|gb|EEF91481.1| hypothetical protein BACCELL_00873 [Bacteroides cellulosilyticus
DSM 14838]
Length = 459
Score = 51.2 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 27/72 (37%), Positives = 38/72 (52%), Gaps = 5/72 (6%)
Query: 76 PERKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTS 135
P+R S+ DFG V G NT++ A+ GG ++ +PEG WLTG +L S
Sbjct: 47 PDRN--FSVVDFGAVKGGIADNTKSITAAINACH---KAGGGRVVIPEGEWLTGPVHLKS 101
Query: 136 NFTLFLERGAVM 147
N L+L AV+
Sbjct: 102 NVNLYLSENAVL 113
>gi|325106323|ref|YP_004275977.1| glycoside hydrolase family protein [Pedobacter saltans DSM 12145]
gi|324975171|gb|ADY54155.1| glycoside hydrolase family 28 [Pedobacter saltans DSM 12145]
Length = 523
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 40/68 (58%), Gaps = 3/68 (4%)
Query: 83 SIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFLE 142
+IKDFG VGDG T NT +KA+ + GG ++ P G +L+G+ L N TL E
Sbjct: 26 NIKDFGAVGDGITLNTLFIQKAIDKCN---NDGGGKVIFPAGRFLSGTVELKDNVTLHFE 82
Query: 143 RGAVMLGS 150
+ A ++GS
Sbjct: 83 KNAELVGS 90
>gi|238784759|ref|ZP_04628762.1| Exo-poly-alpha-D-galacturonosidase [Yersinia bercovieri ATCC 43970]
gi|238714355|gb|EEQ06364.1| Exo-poly-alpha-D-galacturonosidase [Yersinia bercovieri ATCC 43970]
Length = 608
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 44/70 (62%), Gaps = 5/70 (7%)
Query: 82 MSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFL 141
++++DFG + DG T NT+A ++A+ K G ++ +P G + +G+ L S+ TL L
Sbjct: 157 VNVRDFGAIDDGKTLNTKAIQQAIDSC-----KPGCRVEIPSGTYKSGALWLKSDMTLNL 211
Query: 142 ERGAVMLGSQ 151
+ GA +LGS+
Sbjct: 212 QAGATLLGSE 221
>gi|433652543|ref|YP_007296397.1| endopolygalacturonase [Prevotella dentalis DSM 3688]
gi|433303076|gb|AGB28891.1| endopolygalacturonase [Prevotella dentalis DSM 3688]
Length = 526
Score = 51.2 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 27/61 (44%), Positives = 39/61 (63%), Gaps = 3/61 (4%)
Query: 90 VGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFLERGAVMLG 149
VGDGTT NT A ++ V + +GG ++ G +LTGSF++ SN + +ERGA +LG
Sbjct: 57 VGDGTTMNTAAIQQLVDRVS---REGGGRIVFGHGRYLTGSFHMRSNVEVHVERGATILG 113
Query: 150 S 150
S
Sbjct: 114 S 114
>gi|340347659|ref|ZP_08670764.1| polygalacturonase superfamily protein [Prevotella dentalis DSM
3688]
gi|339608853|gb|EGQ13736.1| polygalacturonase superfamily protein [Prevotella dentalis DSM
3688]
Length = 502
Score = 51.2 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 27/61 (44%), Positives = 39/61 (63%), Gaps = 3/61 (4%)
Query: 90 VGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFLERGAVMLG 149
VGDGTT NT A ++ V + +GG ++ G +LTGSF++ SN + +ERGA +LG
Sbjct: 33 VGDGTTMNTAAIQQLVDRVS---REGGGRIVFGHGRYLTGSFHMRSNVEVHVERGATILG 89
Query: 150 S 150
S
Sbjct: 90 S 90
>gi|404406296|ref|ZP_10997880.1| glycoside hydrolase family protein [Alistipes sp. JC136]
Length = 635
Score = 51.2 bits (121), Expect = 2e-04, Method: Composition-based stats.
Identities = 27/69 (39%), Positives = 40/69 (57%), Gaps = 2/69 (2%)
Query: 82 MSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFL 141
+ I + G VGDG T NT + A+ KGG + V +G+++TG+ L SN TL +
Sbjct: 180 VDIAEAGAVGDGATVNTAVLQAAIDKCSA--RKGGGTVWVRDGIYVTGTLQLKSNVTLRV 237
Query: 142 ERGAVMLGS 150
E GA++ GS
Sbjct: 238 EAGAILRGS 246
>gi|431798433|ref|YP_007225337.1| endopolygalacturonase [Echinicola vietnamensis DSM 17526]
gi|430789198|gb|AGA79327.1| endopolygalacturonase [Echinicola vietnamensis DSM 17526]
Length = 477
Score = 51.2 bits (121), Expect = 2e-04, Method: Composition-based stats.
Identities = 27/67 (40%), Positives = 39/67 (58%), Gaps = 3/67 (4%)
Query: 84 IKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFLER 143
I DFG VGDG+T ++A + A+ Q + GG ++ VP G + TG L SN L LE+
Sbjct: 60 ISDFGAVGDGSTDASQAIKSAI---QACAEAGGGKVVVPPGDYPTGPIYLESNVNLHLEK 116
Query: 144 GAVMLGS 150
A ++ S
Sbjct: 117 DARLMFS 123
>gi|170288299|ref|YP_001738537.1| glycoside hydrolase family protein [Thermotoga sp. RQ2]
gi|170175802|gb|ACB08854.1| glycoside hydrolase family 28 [Thermotoga sp. RQ2]
Length = 446
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 44/68 (64%), Gaps = 5/68 (7%)
Query: 75 LPERKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLT 134
+P+R+V ++ DFG GD T +E+F++A+ + +GG +L VPEG++LTG +L
Sbjct: 21 IPDREV--NLLDFGARGDERTDCSESFKRAI---EELSKQGGGRLIVPEGVFLTGPIHLK 75
Query: 135 SNFTLFLE 142
SN L ++
Sbjct: 76 SNIELHVK 83
>gi|330859829|emb|CBX70161.1| exo-poly-alpha-D-galacturonosidase [Yersinia enterocolitica W22703]
Length = 608
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 46/74 (62%), Gaps = 5/74 (6%)
Query: 78 RKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNF 137
R ++++DFG + DG T NT+A ++A+ K G ++ +P G + +G+ L S+
Sbjct: 153 RPQIVNVRDFGVIDDGKTLNTKAIQQAIDSC-----KPGCRVEIPVGTYKSGALWLKSDM 207
Query: 138 TLFLERGAVMLGSQ 151
TL L+ GA++LGS+
Sbjct: 208 TLNLQAGAILLGSE 221
>gi|182415146|ref|YP_001820212.1| galacturan 1,4-alpha-galacturonidase [Opitutus terrae PB90-1]
gi|177842360|gb|ACB76612.1| Galacturan 1,4-alpha-galacturonidase [Opitutus terrae PB90-1]
Length = 478
Score = 50.8 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 34/73 (46%), Positives = 45/73 (61%), Gaps = 5/73 (6%)
Query: 75 LPERKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLT 134
+PER ++ DFG VGDGTT NTEAF +A+ + GG +L VP G + TG F L
Sbjct: 84 IPERTFRLT--DFGAVGDGTTLNTEAFARAIAAVA---KAGGGKLVVPAGTFRTGPFALC 138
Query: 135 SNFTLFLERGAVM 147
S+ L LE GA++
Sbjct: 139 SSLELHLEAGALI 151
>gi|403252174|ref|ZP_10918484.1| exo-poly-alpha-D-galacturonosidase [Thermotoga sp. EMP]
gi|402812187|gb|EJX26666.1| exo-poly-alpha-D-galacturonosidase [Thermotoga sp. EMP]
Length = 446
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 44/68 (64%), Gaps = 5/68 (7%)
Query: 75 LPERKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLT 134
+P+R+V ++ DFG GD T +E+F++A+ + +GG +L VPEG++LTG +L
Sbjct: 21 IPDREV--NLLDFGARGDRRTDCSESFKRAI---EELSKQGGGRLIVPEGVFLTGPIHLK 75
Query: 135 SNFTLFLE 142
SN L ++
Sbjct: 76 SNIELHVK 83
>gi|374311245|ref|YP_005057675.1| glycoside hydrolase family protein [Granulicella mallensis
MP5ACTX8]
gi|358753255|gb|AEU36645.1| glycoside hydrolase family 28 [Granulicella mallensis MP5ACTX8]
Length = 467
Score = 50.8 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 25/69 (36%), Positives = 42/69 (60%), Gaps = 3/69 (4%)
Query: 82 MSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFL 141
++++DFG GDG+T T + ++A+ G G ++ +P G +LTG +L S TL L
Sbjct: 50 LNVRDFGATGDGSTLETASLQQALDRCNVLG---GGEVLIPAGRYLTGGLSLRSRVTLRL 106
Query: 142 ERGAVMLGS 150
++ A +LGS
Sbjct: 107 DKDATLLGS 115
>gi|9437307|emb|CAB99320.1| exo-poly-a-D-galacturonosidase [Erwinia chrysanthemi]
Length = 602
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 43/69 (62%), Gaps = 5/69 (7%)
Query: 82 MSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFL 141
++I +G GDGTT NT A +KA+ Q G ++++P G++ TG+ L S+ TL L
Sbjct: 152 INITQYGAKGDGTTLNTTAIQKAIDACQT-----GCRVDIPAGVFKTGALWLKSDMTLNL 206
Query: 142 ERGAVMLGS 150
+GA +LGS
Sbjct: 207 LQGATLLGS 215
>gi|332159791|ref|YP_004296368.1| exo-poly-alpha-D-galacturonosidase [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
gi|325664021|gb|ADZ40665.1| exo-poly-alpha-D-galacturonosidase precursor [Yersinia
enterocolitica subsp. palearctica 105.5R(r)]
Length = 623
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 46/74 (62%), Gaps = 5/74 (6%)
Query: 78 RKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNF 137
R ++++DFG + DG T NT+A ++A+ K G ++ +P G + +G+ L S+
Sbjct: 168 RPQIVNVRDFGVIDDGKTLNTKAIQQAIDSC-----KPGCRVEIPVGTYKSGALWLKSDM 222
Query: 138 TLFLERGAVMLGSQ 151
TL L+ GA++LGS+
Sbjct: 223 TLNLQAGAILLGSE 236
>gi|307133007|ref|YP_003885023.1| Exo-poly-alpha-D-galacturonosidase [Dickeya dadantii 3937]
gi|306530536|gb|ADN00467.1| Exo-poly-alpha-D-galacturonosidase precursor [Dickeya dadantii
3937]
Length = 602
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 43/69 (62%), Gaps = 5/69 (7%)
Query: 82 MSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFL 141
++I +G GDGTT NT A +KA+ Q G ++++P G++ TG+ L S+ TL L
Sbjct: 152 INITQYGAKGDGTTLNTTAIQKAIDACQT-----GCRVDIPAGVFKTGALWLKSDMTLNL 206
Query: 142 ERGAVMLGS 150
+GA +LGS
Sbjct: 207 LQGATLLGS 215
>gi|291514459|emb|CBK63669.1| Endopolygalacturonase [Alistipes shahii WAL 8301]
Length = 555
Score = 50.8 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 31/69 (44%), Positives = 42/69 (60%), Gaps = 3/69 (4%)
Query: 82 MSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFL 141
+S+ DFGG GDG T NT AF A+ + +GG ++ VPEG+W TG L N L L
Sbjct: 47 VSVADFGGSGDGHTLNTAAFADAIAALA---ARGGGRVVVPEGVWYTGPIELKDNTELHL 103
Query: 142 ERGAVMLGS 150
E+ AV++ S
Sbjct: 104 EQNAVIVFS 112
>gi|423301868|ref|ZP_17279891.1| hypothetical protein HMPREF1057_03032 [Bacteroides finegoldii
CL09T03C10]
gi|408470959|gb|EKJ89491.1| hypothetical protein HMPREF1057_03032 [Bacteroides finegoldii
CL09T03C10]
Length = 752
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 36/64 (56%), Gaps = 3/64 (4%)
Query: 84 IKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFLER 143
I D+G G T NT+A A+ + GG ++ VP+G+WLTG + SN L+LE
Sbjct: 344 ITDYGAKSGGETDNTKAIAAAI---EACYKAGGGRVVVPDGIWLTGPIHFKSNVNLYLEE 400
Query: 144 GAVM 147
AV+
Sbjct: 401 NAVL 404
>gi|436835773|ref|YP_007320989.1| glycoside hydrolase family 28 [Fibrella aestuarina BUZ 2]
gi|384067186|emb|CCH00396.1| glycoside hydrolase family 28 [Fibrella aestuarina BUZ 2]
Length = 505
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 43/85 (50%), Gaps = 11/85 (12%)
Query: 66 AAGLLGDQYLPERKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGL 125
A +LG Y SI+DFG D T NT+A +KA+ GG ++ VP G
Sbjct: 23 ATSVLGQSY--------SIRDFGAKTDSTFLNTKAIQKAIDKCHA---NGGGEVVVPAGT 71
Query: 126 WLTGSFNLTSNFTLFLERGAVMLGS 150
+ TG+ L SN L L GAV+ GS
Sbjct: 72 FYTGTIFLKSNVYLHLMPGAVLQGS 96
>gi|374374693|ref|ZP_09632351.1| glycoside hydrolase family 28 [Niabella soli DSM 19437]
gi|373231533|gb|EHP51328.1| glycoside hydrolase family 28 [Niabella soli DSM 19437]
Length = 515
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 41/69 (59%), Gaps = 3/69 (4%)
Query: 82 MSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFL 141
+ + D+G GDGTT NT A +KA+ KGG + P G +++G+ L +N TL L
Sbjct: 22 IKVTDYGAKGDGTTLNTVAIQKAIDACNA---KGGGHVIFPAGRYVSGTVLLKNNVTLQL 78
Query: 142 ERGAVMLGS 150
E+ A ++GS
Sbjct: 79 EKDAWIIGS 87
>gi|317046607|ref|YP_004114255.1| glycoside hydrolase family protein [Pantoea sp. At-9b]
gi|316948224|gb|ADU67699.1| glycoside hydrolase family 28 [Pantoea sp. At-9b]
Length = 443
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 39/70 (55%), Gaps = 3/70 (4%)
Query: 82 MSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFL 141
+S+ DF V DG T +T F++A+ ++ +GG L VP G + G+ L S+ L L
Sbjct: 3 LSLADFHPVADGETLDTACFQRALDHLT---QRGGGTLTVPPGRYRLGTLTLGSHLKLHL 59
Query: 142 ERGAVMLGSQ 151
GA +L SQ
Sbjct: 60 AAGATLLASQ 69
>gi|255531066|ref|YP_003091438.1| glycoside hydrolase family protein [Pedobacter heparinus DSM 2366]
gi|255344050|gb|ACU03376.1| glycoside hydrolase family 28 [Pedobacter heparinus DSM 2366]
Length = 554
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 40/70 (57%), Gaps = 3/70 (4%)
Query: 78 RKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNF 137
+K ++I +G DG T NT++ +A+ +GG + +PEGLWLTG L SN
Sbjct: 42 KKDTINILKYGAKNDGITLNTKSINQAI---TDCNKRGGGVVVIPEGLWLTGPIELKSNV 98
Query: 138 TLFLERGAVM 147
L L++ A++
Sbjct: 99 NLHLKKNALL 108
>gi|392939365|ref|ZP_10305009.1| endopolygalacturonase [Thermoanaerobacter siderophilus SR4]
gi|392291115|gb|EIV99558.1| endopolygalacturonase [Thermoanaerobacter siderophilus SR4]
Length = 519
Score = 50.4 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 27/74 (36%), Positives = 42/74 (56%), Gaps = 5/74 (6%)
Query: 77 ERKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSN 136
E K ++++DFG GDG T +T + A+ + G ++ P G++LTG L SN
Sbjct: 80 EEKFMVNVRDFGAKGDGKTIDTSFIQAAI-----YSCPEGGRVFFPGGIYLTGPIFLKSN 134
Query: 137 FTLFLERGAVMLGS 150
TL L + AV+LG+
Sbjct: 135 ITLELSKDAVLLGA 148
>gi|374313032|ref|YP_005059462.1| Polygalacturonase [Granulicella mallensis MP5ACTX8]
gi|358755042|gb|AEU38432.1| Polygalacturonase [Granulicella mallensis MP5ACTX8]
Length = 420
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 41/67 (61%), Gaps = 2/67 (2%)
Query: 84 IKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFLER 143
++ FG GDGTT +T A +KA+ G+ K G + + G++L+G +L SN TL +
Sbjct: 27 VRAFGAKGDGTTKDTVAIQKAIDTCAGY--KKGGVVKLSGGIFLSGPISLKSNITLDIAE 84
Query: 144 GAVMLGS 150
GA +LGS
Sbjct: 85 GATLLGS 91
>gi|154502613|ref|ZP_02039673.1| hypothetical protein RUMGNA_00426 [Ruminococcus gnavus ATCC 29149]
gi|336431285|ref|ZP_08611138.1| hypothetical protein HMPREF0991_00257 [Lachnospiraceae bacterium
2_1_58FAA]
gi|153796805|gb|EDN79225.1| hypothetical protein RUMGNA_00426 [Ruminococcus gnavus ATCC 29149]
gi|336019011|gb|EGN48744.1| hypothetical protein HMPREF0991_00257 [Lachnospiraceae bacterium
2_1_58FAA]
Length = 108
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 37/61 (60%), Gaps = 3/61 (4%)
Query: 84 IKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFLER 143
I D+G V DGTT+N A + AV GG ++ VP G +L+G+ L SN TL+LER
Sbjct: 5 ITDYGAVADGTTNNRAAIQAAV---DACTVAGGGRVIVPIGQFLSGTIVLKSNVTLYLER 61
Query: 144 G 144
G
Sbjct: 62 G 62
>gi|391227888|ref|ZP_10264095.1| endopolygalacturonase [Opitutaceae bacterium TAV1]
gi|391223381|gb|EIQ01801.1| endopolygalacturonase [Opitutaceae bacterium TAV1]
Length = 916
Score = 50.4 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 29/77 (37%), Positives = 41/77 (53%), Gaps = 5/77 (6%)
Query: 75 LPERKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLT 134
+P+R+V I+D G G NT A +A+ Q +GG + VP G+WLTG+ +
Sbjct: 15 IPDRRV--DIRDHGARPGGALLNTRAIAEAI---QACARQGGGHVVVPPGIWLTGAIHFR 69
Query: 135 SNFTLFLERGAVMLGSQ 151
S L LE GA + SQ
Sbjct: 70 SRIDLHLEAGAELRFSQ 86
>gi|289578915|ref|YP_003477542.1| glycoside hydrolase family protein [Thermoanaerobacter italicus
Ab9]
gi|289528628|gb|ADD02980.1| glycoside hydrolase family 28 [Thermoanaerobacter italicus Ab9]
Length = 519
Score = 50.4 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 27/74 (36%), Positives = 42/74 (56%), Gaps = 5/74 (6%)
Query: 77 ERKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSN 136
E K ++++DFG GDG T +T + A+ + G ++ P G++LTG L SN
Sbjct: 80 EEKFMVNVRDFGAKGDGKTIDTSFIQAAI-----YSCPEGGRVFFPGGIYLTGPIFLKSN 134
Query: 137 FTLFLERGAVMLGS 150
TL L + AV+LG+
Sbjct: 135 ITLELSKDAVLLGA 148
>gi|374376182|ref|ZP_09633840.1| Exo-poly-alpha-galacturonosidase [Niabella soli DSM 19437]
gi|373233022|gb|EHP52817.1| Exo-poly-alpha-galacturonosidase [Niabella soli DSM 19437]
Length = 547
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 35/65 (53%), Gaps = 3/65 (4%)
Query: 84 IKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFLER 143
I FG V DG T NT++ + A+ KGG + VP GLWLTG L SN L L
Sbjct: 40 ITKFGAVPDGYTLNTKSIQAAIDACTA---KGGGVVAVPPGLWLTGPLTLKSNVNLNLAA 96
Query: 144 GAVML 148
GA +L
Sbjct: 97 GATLL 101
>gi|322437669|ref|YP_004219759.1| glycoside hydrolase family protein [Granulicella tundricola
MP5ACTX9]
gi|321165562|gb|ADW71265.1| glycoside hydrolase family 28 [Granulicella tundricola MP5ACTX9]
Length = 482
Score = 50.4 bits (119), Expect = 3e-04, Method: Composition-based stats.
Identities = 27/75 (36%), Positives = 43/75 (57%), Gaps = 3/75 (4%)
Query: 76 PERKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTS 135
P+ V ++++D G GDG+T +T A + A+ G G ++ VP G +LTG+ + S
Sbjct: 35 PKSDVQVNVRDLGATGDGSTKDTVAMQLALDRCSVLG---GGEVLVPAGEYLTGALRIHS 91
Query: 136 NFTLFLERGAVMLGS 150
N L +E GA + GS
Sbjct: 92 NTVLRIEEGASLNGS 106
>gi|116622096|ref|YP_824252.1| glycoside hydrolase family protein [Candidatus Solibacter usitatus
Ellin6076]
gi|116225258|gb|ABJ83967.1| glycoside hydrolase, family 28 [Candidatus Solibacter usitatus
Ellin6076]
Length = 731
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 43/71 (60%), Gaps = 3/71 (4%)
Query: 81 AMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLF 140
+ +++DFG GDG +T+A +A+ + G GG + +P G +L+G+ L N TL+
Sbjct: 25 SCNVRDFGARGDGVALDTQAINRAI---EKCGIAGGGTVYLPPGTYLSGTVRLRDNITLW 81
Query: 141 LERGAVMLGSQ 151
L+ GA + G++
Sbjct: 82 LDSGATLRGTR 92
>gi|148269623|ref|YP_001244083.1| glycoside hydrolase family protein [Thermotoga petrophila RKU-1]
gi|147735167|gb|ABQ46507.1| glycoside hydrolase, family 28 [Thermotoga petrophila RKU-1]
Length = 446
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 43/68 (63%), Gaps = 5/68 (7%)
Query: 75 LPERKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLT 134
+P R+V ++ DFG GD T +E+F++A+ + +GG +L VPEG++LTG +L
Sbjct: 21 IPNREV--NLLDFGARGDERTDCSESFKRAI---EELSKQGGGRLIVPEGVFLTGPIHLK 75
Query: 135 SNFTLFLE 142
SN L ++
Sbjct: 76 SNIELHVK 83
>gi|373953148|ref|ZP_09613108.1| glycoside hydrolase family 28 [Mucilaginibacter paludis DSM 18603]
gi|373889748|gb|EHQ25645.1| glycoside hydrolase family 28 [Mucilaginibacter paludis DSM 18603]
Length = 542
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/66 (50%), Positives = 39/66 (59%), Gaps = 3/66 (4%)
Query: 83 SIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFLE 142
+IKDFG VGDG T NT A KA+ G GG L +P GLWLTG L SN L +
Sbjct: 54 NIKDFGAVGDGQTLNTGAIAKAIAACSAAG--GGTVL-IPAGLWLTGPIELKSNINLHAD 110
Query: 143 RGAVML 148
GA++L
Sbjct: 111 HGALIL 116
>gi|298383811|ref|ZP_06993372.1| glycoside Hydrolase Family 28 [Bacteroides sp. 1_1_14]
gi|298263415|gb|EFI06278.1| glycoside Hydrolase Family 28 [Bacteroides sp. 1_1_14]
Length = 464
Score = 50.1 bits (118), Expect = 3e-04, Method: Composition-based stats.
Identities = 28/72 (38%), Positives = 36/72 (50%), Gaps = 5/72 (6%)
Query: 76 PERKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTS 135
P+R I DFG V G NT+A A+ GG ++ VP G+WLTG + S
Sbjct: 50 PDRD--FKITDFGAVPGGEVDNTKAIAAAI---DACNKAGGGRVVVPAGIWLTGPVHFKS 104
Query: 136 NFTLFLERGAVM 147
N L LE AV+
Sbjct: 105 NINLCLEENAVL 116
>gi|373849855|ref|ZP_09592656.1| Polygalacturonase [Opitutaceae bacterium TAV5]
gi|372476020|gb|EHP36029.1| Polygalacturonase [Opitutaceae bacterium TAV5]
Length = 916
Score = 50.1 bits (118), Expect = 3e-04, Method: Composition-based stats.
Identities = 29/77 (37%), Positives = 41/77 (53%), Gaps = 5/77 (6%)
Query: 75 LPERKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLT 134
+P+R+V I+D G G NT A A+ Q +GG ++ VP G+WLTG+ +
Sbjct: 15 IPDRRV--DIRDHGAHPGGALLNTRAIADAI---QACARQGGGRVVVPSGIWLTGAIHFR 69
Query: 135 SNFTLFLERGAVMLGSQ 151
S L LE GA + SQ
Sbjct: 70 SRIDLHLEAGAELRFSQ 86
>gi|150009066|ref|YP_001303809.1| glycoside hydrolase [Parabacteroides distasonis ATCC 8503]
gi|256841626|ref|ZP_05547132.1| glycoside hydrolase, family 28 [Parabacteroides sp. D13]
gi|423334607|ref|ZP_17312386.1| hypothetical protein HMPREF1075_03909 [Parabacteroides distasonis
CL03T12C09]
gi|149937490|gb|ABR44187.1| glycoside hydrolase family 28 [Parabacteroides distasonis ATCC
8503]
gi|256736520|gb|EEU49848.1| glycoside hydrolase, family 28 [Parabacteroides sp. D13]
gi|409225798|gb|EKN18716.1| hypothetical protein HMPREF1075_03909 [Parabacteroides distasonis
CL03T12C09]
Length = 446
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 38/67 (56%), Gaps = 3/67 (4%)
Query: 83 SIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFLE 142
+I DFG GDG T NT+ + + + +GG + +PEG +LTGS L S LFLE
Sbjct: 37 NIVDFGAKGDGITDNTQFINRTI---EACSLRGGGTVIIPEGTFLTGSILLKSKVNLFLE 93
Query: 143 RGAVMLG 149
AV+ G
Sbjct: 94 SNAVVKG 100
>gi|298377179|ref|ZP_06987133.1| conserved hypothetical protein [Bacteroides sp. 3_1_19]
gi|298266163|gb|EFI07822.1| conserved hypothetical protein [Bacteroides sp. 3_1_19]
Length = 446
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 38/67 (56%), Gaps = 3/67 (4%)
Query: 83 SIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFLE 142
+I DFG GDG T NT+ + + + +GG + +PEG +LTGS L S LFLE
Sbjct: 37 NIVDFGAKGDGITDNTQFINRTI---EACSLRGGGTVIIPEGTFLTGSILLKSKVNLFLE 93
Query: 143 RGAVMLG 149
AV+ G
Sbjct: 94 SNAVVKG 100
>gi|386820345|ref|ZP_10107561.1| endopolygalacturonase [Joostella marina DSM 19592]
gi|386425451|gb|EIJ39281.1| endopolygalacturonase [Joostella marina DSM 19592]
Length = 514
Score = 50.1 bits (118), Expect = 3e-04, Method: Composition-based stats.
Identities = 25/68 (36%), Positives = 37/68 (54%), Gaps = 3/68 (4%)
Query: 84 IKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFLER 143
+ DFGG+GDG T NTEA +KA+ + GG + G +L+GS + N + +
Sbjct: 85 VNDFGGIGDGKTINTEAIQKAI---DKCAENGGGTIAFKPGTYLSGSIFIKKNIHFKIGK 141
Query: 144 GAVMLGSQ 151
+LGSQ
Sbjct: 142 NVTILGSQ 149
>gi|325300086|ref|YP_004260003.1| glycoside hydrolase [Bacteroides salanitronis DSM 18170]
gi|324319639|gb|ADY37530.1| glycoside hydrolase family protein [Bacteroides salanitronis DSM
18170]
Length = 476
Score = 50.1 bits (118), Expect = 3e-04, Method: Composition-based stats.
Identities = 28/82 (34%), Positives = 45/82 (54%), Gaps = 3/82 (3%)
Query: 69 LLGDQYLPERKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLT 128
LG L + ++KDFG VGDG ++EA +A+ Q +GG +++P G +
Sbjct: 11 FLGLGILNAQADTYNVKDFGAVGDGIHIDSEAINQAI---QTAAAQGGGTVHIPAGEYAC 67
Query: 129 GSFNLTSNFTLFLERGAVMLGS 150
S L S+ L LE+GA ++G+
Sbjct: 68 YSIRLASHIHLHLEQGATIVGA 89
>gi|423226292|ref|ZP_17212758.1| hypothetical protein HMPREF1062_04944 [Bacteroides cellulosilyticus
CL02T12C19]
gi|392629720|gb|EIY23726.1| hypothetical protein HMPREF1062_04944 [Bacteroides cellulosilyticus
CL02T12C19]
Length = 459
Score = 50.1 bits (118), Expect = 3e-04, Method: Composition-based stats.
Identities = 27/72 (37%), Positives = 37/72 (51%), Gaps = 5/72 (6%)
Query: 76 PERKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTS 135
P R S+ DFG V G NT++ A+ GG ++ +PEG WLTG +L S
Sbjct: 47 PNRN--FSVVDFGAVKGGIADNTKSIAAAIDACH---KAGGGRVVIPEGEWLTGPVHLKS 101
Query: 136 NFTLFLERGAVM 147
N L+L AV+
Sbjct: 102 NVNLYLSENAVL 113
>gi|393789553|ref|ZP_10377674.1| hypothetical protein HMPREF1068_03954 [Bacteroides nordii
CL02T12C05]
gi|392651001|gb|EIY44667.1| hypothetical protein HMPREF1068_03954 [Bacteroides nordii
CL02T12C05]
Length = 467
Score = 50.1 bits (118), Expect = 3e-04, Method: Composition-based stats.
Identities = 28/69 (40%), Positives = 38/69 (55%), Gaps = 3/69 (4%)
Query: 82 MSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFL 141
+ I G GDGTT+NT +KA+ G +NVP G +LTG+ + SN L L
Sbjct: 22 VDITTLGAKGDGTTNNTALIQKAIDDCSA---HNGGTVNVPPGQFLTGTLFIKSNVNLHL 78
Query: 142 ERGAVMLGS 150
+ GA +LGS
Sbjct: 79 DFGAELLGS 87
>gi|381405974|ref|ZP_09930658.1| polygalacturonase [Pantoea sp. Sc1]
gi|380739173|gb|EIC00237.1| polygalacturonase [Pantoea sp. Sc1]
Length = 443
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 38/70 (54%), Gaps = 3/70 (4%)
Query: 82 MSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFL 141
+S+ DF DG T +T ++A + GG +L +P G + +G NL S+ L L
Sbjct: 3 LSLADFHPAADGETPDTAVLQRA---LDQIAAAGGGRLTLPAGRYRSGCLNLPSDIELHL 59
Query: 142 ERGAVMLGSQ 151
+ GAV++ SQ
Sbjct: 60 DAGAVLIASQ 69
>gi|154490365|ref|ZP_02030626.1| hypothetical protein PARMER_00598 [Parabacteroides merdae ATCC
43184]
gi|154088976|gb|EDN88020.1| polygalacturonase (pectinase) [Parabacteroides merdae ATCC 43184]
Length = 480
Score = 49.7 bits (117), Expect = 4e-04, Method: Composition-based stats.
Identities = 27/65 (41%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 86 DFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFLERGA 145
DFG DG T NT + +K + ++ +GG +L G + TG+ L SN TL LE GA
Sbjct: 15 DFGVKADGKTLNTSSIQKGIDFVNA---QGGGRLVFTAGNYQTGTIYLKSNVTLHLEEGA 71
Query: 146 VMLGS 150
+LGS
Sbjct: 72 TLLGS 76
>gi|301310833|ref|ZP_07216762.1| conserved hypothetical protein [Bacteroides sp. 20_3]
gi|423339317|ref|ZP_17317058.1| hypothetical protein HMPREF1059_02983 [Parabacteroides distasonis
CL09T03C24]
gi|300830896|gb|EFK61537.1| conserved hypothetical protein [Bacteroides sp. 20_3]
gi|409231219|gb|EKN24076.1| hypothetical protein HMPREF1059_02983 [Parabacteroides distasonis
CL09T03C24]
Length = 446
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 38/67 (56%), Gaps = 3/67 (4%)
Query: 83 SIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFLE 142
+I DFG GDG T NT+ + + + +GG + +PEG +LTGS L S LFLE
Sbjct: 37 NIVDFGAKGDGITDNTQFINRTI---EDCSLRGGGTVIIPEGTFLTGSILLKSKVNLFLE 93
Query: 143 RGAVMLG 149
AV+ G
Sbjct: 94 SNAVVKG 100
>gi|288541509|gb|ADC45581.1| glycoside hydrolase [Streptomyces nanchangensis]
Length = 433
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 38/73 (52%), Gaps = 5/73 (6%)
Query: 75 LPERKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLT 134
P R +I +G VGDG NTEAFR A+ GG + VPEG +LTG+ +L
Sbjct: 13 FPRR--TFTITHYGAVGDGQKMNTEAFRAAIAACH---RAGGGHVLVPEGRFLTGAIHLR 67
Query: 135 SNFTLFLERGAVM 147
S L + GA +
Sbjct: 68 SGVDLHVTEGATI 80
>gi|410104858|ref|ZP_11299769.1| hypothetical protein HMPREF0999_03541 [Parabacteroides sp. D25]
gi|409233433|gb|EKN26270.1| hypothetical protein HMPREF0999_03541 [Parabacteroides sp. D25]
Length = 446
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 38/67 (56%), Gaps = 3/67 (4%)
Query: 83 SIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFLE 142
+I DFG GDG T NT+ + + + +GG + +PEG +LTGS L S LFLE
Sbjct: 37 NIVDFGAKGDGITDNTQFINRTI---EACTLRGGGTVIIPEGTFLTGSILLRSKVNLFLE 93
Query: 143 RGAVMLG 149
AV+ G
Sbjct: 94 SNAVVKG 100
>gi|427409554|ref|ZP_18899756.1| hypothetical protein HMPREF9718_02230 [Sphingobium yanoikuyae ATCC
51230]
gi|425711687|gb|EKU74702.1| hypothetical protein HMPREF9718_02230 [Sphingobium yanoikuyae ATCC
51230]
Length = 526
Score = 49.7 bits (117), Expect = 4e-04, Method: Composition-based stats.
Identities = 26/76 (34%), Positives = 46/76 (60%), Gaps = 5/76 (6%)
Query: 75 LPERKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLT 134
LP+ V +++DFG GDG+ ++ A +A+ + ++GG + VP G + + +L
Sbjct: 30 LPQGMV--NVRDFGAKGDGSHIDSPAIDRAIAFA---AERGGGTVYVPPGSYACYTIHLK 84
Query: 135 SNFTLFLERGAVMLGS 150
SN TL+L+RGA +L +
Sbjct: 85 SNITLWLDRGATLLAA 100
>gi|29349563|ref|NP_813066.1| hypothetical protein BT_4155 [Bacteroides thetaiotaomicron
VPI-5482]
gi|29341473|gb|AAO79260.1| pectate lyase [Bacteroides thetaiotaomicron VPI-5482]
Length = 448
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 36/72 (50%), Gaps = 5/72 (6%)
Query: 76 PERKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTS 135
P+R I DFG V G NT+A A+ GG ++ VP G+WLTG + S
Sbjct: 37 PDRD--FKITDFGAVPGGEVDNTKAIAAAI---DACNKAGGGRVVVPAGIWLTGPVHFKS 91
Query: 136 NFTLFLERGAVM 147
N L LE AV+
Sbjct: 92 NINLCLEEDAVL 103
>gi|255015684|ref|ZP_05287810.1| glycoside hydrolase family protein [Bacteroides sp. 2_1_7]
Length = 423
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 38/67 (56%), Gaps = 3/67 (4%)
Query: 83 SIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFLE 142
+I DFG GDG T NT+ R ++ +GG + +PEG +LTGS L S LFLE
Sbjct: 14 NIVDFGAKGDGITDNTQFIN---RTIEACTLRGGGTVIIPEGTFLTGSILLRSKVNLFLE 70
Query: 143 RGAVMLG 149
AV+ G
Sbjct: 71 SNAVVKG 77
>gi|284039631|ref|YP_003389561.1| glycoside hydrolase family protein [Spirosoma linguale DSM 74]
gi|283818924|gb|ADB40762.1| glycoside hydrolase family 28 [Spirosoma linguale DSM 74]
Length = 551
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 38/71 (53%), Gaps = 3/71 (4%)
Query: 78 RKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNF 137
R+ +I FG DG + NT+A KA+ KGG + VP G+WLTG L SN
Sbjct: 42 RRDTTNIIAFGAKPDGVSLNTQAINKAISTCS---QKGGGVVLVPAGIWLTGPIVLKSNV 98
Query: 138 TLFLERGAVML 148
L L++ A +L
Sbjct: 99 NLHLKKAATLL 109
>gi|397691340|ref|YP_006528594.1| exo-poly-alpha-D-galacturonosidase [Melioribacter roseus P3M]
gi|395812832|gb|AFN75581.1| exo-poly-alpha-D-galacturonosidase [Melioribacter roseus P3M]
Length = 495
Score = 49.3 bits (116), Expect = 5e-04, Method: Composition-based stats.
Identities = 23/53 (43%), Positives = 33/53 (62%), Gaps = 3/53 (5%)
Query: 95 TSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFLERGAVM 147
T NT+A KA+ + GG ++ VP G+WLTG + SN LFLE+GA++
Sbjct: 2 TKNTDAINKAI---AACSENGGGKVIVPAGIWLTGPIEMKSNVNLFLEKGAMI 51
>gi|154490366|ref|ZP_02030627.1| hypothetical protein PARMER_00599 [Parabacteroides merdae ATCC
43184]
gi|423725588|ref|ZP_17699704.1| hypothetical protein HMPREF1078_03593 [Parabacteroides merdae
CL09T00C40]
gi|154088977|gb|EDN88021.1| hypothetical protein PARMER_00599 [Parabacteroides merdae ATCC
43184]
gi|409234035|gb|EKN26866.1| hypothetical protein HMPREF1078_03593 [Parabacteroides merdae
CL09T00C40]
Length = 250
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 46/82 (56%), Gaps = 11/82 (13%)
Query: 67 AGLLGDQYLPERKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLW 126
AGL Y +VAM FG DG T NT + ++AV Y+ ++GG +L G +
Sbjct: 18 AGLSAKDY----QVAM----FGIKSDGVTLNTRSIQRAVDYIS---EQGGGRLIFYVGRY 66
Query: 127 LTGSFNLTSNFTLFLERGAVML 148
LTGS L SN T+ +E GAV++
Sbjct: 67 LTGSIELKSNVTIRIEEGAVLV 88
>gi|383120496|ref|ZP_09941224.1| hypothetical protein BSIG_2496 [Bacteroides sp. 1_1_6]
gi|382985014|gb|EES68535.2| hypothetical protein BSIG_2496 [Bacteroides sp. 1_1_6]
Length = 462
Score = 49.3 bits (116), Expect = 5e-04, Method: Composition-based stats.
Identities = 28/72 (38%), Positives = 36/72 (50%), Gaps = 5/72 (6%)
Query: 76 PERKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTS 135
P+R I DFG V G NT+A A+ GG ++ VP G+WLTG + S
Sbjct: 48 PDRD--FKITDFGAVPGGEVDNTKAIAAAI---DACNKAGGGRVVVPAGIWLTGPVHFKS 102
Query: 136 NFTLFLERGAVM 147
N L LE AV+
Sbjct: 103 NVNLCLEEDAVL 114
>gi|408369670|ref|ZP_11167450.1| glycoside hydrolase [Galbibacter sp. ck-I2-15]
gi|407744724|gb|EKF56291.1| glycoside hydrolase [Galbibacter sp. ck-I2-15]
Length = 454
Score = 49.3 bits (116), Expect = 5e-04, Method: Composition-based stats.
Identities = 24/67 (35%), Positives = 39/67 (58%), Gaps = 3/67 (4%)
Query: 84 IKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFLER 143
I D+G + + + + A A++ +GG ++ +P+G WLTG +L SN L LE+
Sbjct: 54 ITDYGALPNDQKATSRAIMDAIKEAHA---QGGGRVVIPKGEWLTGKIHLKSNINLHLEQ 110
Query: 144 GAVMLGS 150
GAV+L S
Sbjct: 111 GAVLLFS 117
>gi|300715765|ref|YP_003740568.1| Pectin lyase fold domain protein, virulence factor [Erwinia
billingiae Eb661]
gi|299061601|emb|CAX58716.1| Pectin lyase fold domain protein, virulence factor [Erwinia
billingiae Eb661]
Length = 791
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 37/67 (55%), Gaps = 3/67 (4%)
Query: 85 KDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFLERG 144
+DFGG DG T NT A ++A+ +GG + + G WL+G L SN TL +++G
Sbjct: 378 EDFGGKADGKTLNTTAIQQAIDQCS---QRGGGTVQLSPGRWLSGPLQLQSNITLQIDQG 434
Query: 145 AVMLGSQ 151
A + S
Sbjct: 435 ATLQASN 441
>gi|427384860|ref|ZP_18881365.1| hypothetical protein HMPREF9447_02398 [Bacteroides oleiciplenus YIT
12058]
gi|425728121|gb|EKU90980.1| hypothetical protein HMPREF9447_02398 [Bacteroides oleiciplenus YIT
12058]
Length = 462
Score = 49.3 bits (116), Expect = 5e-04, Method: Composition-based stats.
Identities = 26/65 (40%), Positives = 35/65 (53%), Gaps = 4/65 (6%)
Query: 84 IKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEG-LWLTGSFNLTSNFTLFLE 142
I DFG VGDG T E F KA+ D GG ++ VP G ++ G SN + LE
Sbjct: 49 ITDFGAVGDGKTLCKEPFEKAITICS---DNGGGKITVPAGTYYMNGPLVFKSNVNVHLE 105
Query: 143 RGAVM 147
+GA++
Sbjct: 106 KGAIL 110
>gi|129749|sp|P15922.1|PEHX_ERWCH RecName: Full=Exo-poly-alpha-D-galacturonosidase; Short=Exo-PG;
Flags: Precursor
gi|148447|gb|AAA24842.1| exo-poly-alpha-D-galacturonosidase [Erwinia chrysanthemi]
Length = 602
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 42/69 (60%), Gaps = 5/69 (7%)
Query: 82 MSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFL 141
++I +G GDGTT NT A +KA+ G +++VP G++ TG+ L S+ TL L
Sbjct: 152 INITQYGAKGDGTTLNTSAIQKAIDAC-----PTGCRIDVPAGVFKTGALWLKSDMTLNL 206
Query: 142 ERGAVMLGS 150
+GA +LGS
Sbjct: 207 LQGATLLGS 215
>gi|423346855|ref|ZP_17324543.1| hypothetical protein HMPREF1060_02215 [Parabacteroides merdae
CL03T12C32]
gi|409219136|gb|EKN12100.1| hypothetical protein HMPREF1060_02215 [Parabacteroides merdae
CL03T12C32]
Length = 250
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 46/82 (56%), Gaps = 11/82 (13%)
Query: 67 AGLLGDQYLPERKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLW 126
AGL Y +VAM FG DG T NT + ++AV Y+ ++GG +L G +
Sbjct: 18 AGLSAKDY----QVAM----FGIKSDGVTLNTRSIQRAVDYIS---EQGGGRLIFYVGRY 66
Query: 127 LTGSFNLTSNFTLFLERGAVML 148
LTGS L SN T+ +E GAV++
Sbjct: 67 LTGSIELKSNVTIRIEEGAVLV 88
>gi|381203143|ref|ZP_09910251.1| polygalacturonase [Sphingobium yanoikuyae XLDN2-5]
Length = 531
Score = 49.3 bits (116), Expect = 5e-04, Method: Composition-based stats.
Identities = 22/69 (31%), Positives = 44/69 (63%), Gaps = 3/69 (4%)
Query: 82 MSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFL 141
++++DFG GDG+ ++ A +A+ + ++GG + +P G + + + +L SN TL+L
Sbjct: 40 VNVRDFGAKGDGSHIDSPAIDRAIAFA---AERGGGTVYLPPGRYASYTIHLKSNITLWL 96
Query: 142 ERGAVMLGS 150
+RGA +L +
Sbjct: 97 DRGATLLAA 105
>gi|375148592|ref|YP_005011033.1| glycoside hydrolase family protein [Niastella koreensis GR20-10]
gi|361062638|gb|AEW01630.1| glycoside hydrolase family 28 [Niastella koreensis GR20-10]
Length = 482
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 38/71 (53%), Gaps = 3/71 (4%)
Query: 80 VAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTL 139
V + I +G V DG T NT A +KA+ KGG ++ P G WL+G+ L TL
Sbjct: 23 VIIDITRYGAVADGKTINTAAIQKAIDECH---QKGGGKVVFPAGSWLSGTIVLKDQVTL 79
Query: 140 FLERGAVMLGS 150
++ A +LGS
Sbjct: 80 QFDKDARLLGS 90
>gi|384047530|ref|YP_005495547.1| glycoside hydrolase Family 28 [Bacillus megaterium WSH-002]
gi|345445221|gb|AEN90238.1| Glycoside Hydrolase Family 28 [Bacillus megaterium WSH-002]
Length = 465
Score = 49.3 bits (116), Expect = 6e-04, Method: Composition-based stats.
Identities = 27/77 (35%), Positives = 43/77 (55%), Gaps = 5/77 (6%)
Query: 75 LPERKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLT 134
P R +IK +G GDG + +T AF+KA+ + GG ++ VP G+++TG+ L
Sbjct: 44 FPNR--TFNIKRYGAAGDGKSDSTAAFKKAI---EAANKAGGGRVVVPPGIYVTGAIYLK 98
Query: 135 SNFTLFLERGAVMLGSQ 151
SN L + + A + SQ
Sbjct: 99 SNVNLHVMKKATIKFSQ 115
>gi|329925656|ref|ZP_08280474.1| polygalacturonase (pectinase) [Paenibacillus sp. HGF5]
gi|328939683|gb|EGG36026.1| polygalacturonase (pectinase) [Paenibacillus sp. HGF5]
Length = 523
Score = 49.3 bits (116), Expect = 6e-04, Method: Composition-based stats.
Identities = 26/77 (33%), Positives = 40/77 (51%), Gaps = 5/77 (6%)
Query: 75 LPERKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLT 134
+PE V +I D+G VG+G NT F +A+ + GG + +P G+W TG L
Sbjct: 16 IPEHTV--TISDYGAVGNGVYDNTRVFHQAI---EACAKAGGGTVVIPPGIWRTGPIKLQ 70
Query: 135 SNFTLFLERGAVMLGSQ 151
S L GA+++ S+
Sbjct: 71 SRIELHASAGALVVFSK 87
>gi|251787803|ref|YP_003002524.1| glycoside hydrolase family 28 [Dickeya zeae Ech1591]
gi|247536424|gb|ACT05045.1| glycoside hydrolase family 28 [Dickeya zeae Ech1591]
Length = 602
Score = 49.3 bits (116), Expect = 6e-04, Method: Composition-based stats.
Identities = 28/69 (40%), Positives = 42/69 (60%), Gaps = 5/69 (7%)
Query: 82 MSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFL 141
++I +G GDGTT NT A +KA+ G +++VP G++ TG+ L S+ TL L
Sbjct: 152 INITQYGAKGDGTTLNTSAIQKAIDAC-----PTGCRIDVPAGVFKTGALWLKSDMTLNL 206
Query: 142 ERGAVMLGS 150
+GA +LGS
Sbjct: 207 LQGATLLGS 215
>gi|423342236|ref|ZP_17319950.1| hypothetical protein HMPREF1077_01380 [Parabacteroides johnsonii
CL02T12C29]
gi|409218150|gb|EKN11122.1| hypothetical protein HMPREF1077_01380 [Parabacteroides johnsonii
CL02T12C29]
Length = 250
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 45/82 (54%), Gaps = 11/82 (13%)
Query: 67 AGLLGDQYLPERKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLW 126
AGL Y +VAM FG DG T NT + ++AV Y+ G +GG +L G +
Sbjct: 18 AGLSAKDY----QVAM----FGIKSDGVTLNTRSIQRAVDYISG---QGGGRLVFYVGRY 66
Query: 127 LTGSFNLTSNFTLFLERGAVML 148
LTGS L SN T+ +E GA ++
Sbjct: 67 LTGSIELKSNVTIRIEEGATLV 88
>gi|390933294|ref|YP_006390799.1| glycoside hydrolase family protein [Thermoanaerobacterium
saccharolyticum JW/SL-YS485]
gi|389568795|gb|AFK85200.1| glycoside hydrolase family 28 [Thermoanaerobacterium
saccharolyticum JW/SL-YS485]
Length = 518
Score = 49.3 bits (116), Expect = 6e-04, Method: Composition-based stats.
Identities = 26/70 (37%), Positives = 42/70 (60%), Gaps = 5/70 (7%)
Query: 82 MSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFL 141
+++KDFG VGDG +T + + A+ G ++ PEG++LT L SN T+ L
Sbjct: 84 INVKDFGAVGDGKRIDTFSIQSAI-----MACPDGGRVYFPEGVYLTYPIFLKSNITIEL 138
Query: 142 ERGAVMLGSQ 151
+GAV+LG++
Sbjct: 139 GKGAVLLGAK 148
>gi|374375481|ref|ZP_09633139.1| Endopygalactorunase [Niabella soli DSM 19437]
gi|373232321|gb|EHP52116.1| Endopygalactorunase [Niabella soli DSM 19437]
Length = 246
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 40/64 (62%), Gaps = 3/64 (4%)
Query: 87 FGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFLERGAV 146
FG + DG T+NT + +KA+ ++ + GG +L G ++TGS L SN L LE GAV
Sbjct: 28 FGILSDGVTNNTRSIQKAIDFIH---ENGGGRLVFYVGRYVTGSILLKSNVILKLEEGAV 84
Query: 147 MLGS 150
++G+
Sbjct: 85 LVGA 88
>gi|354603312|ref|ZP_09021311.1| hypothetical protein HMPREF9450_00226 [Alistipes indistinctus YIT
12060]
gi|353349189|gb|EHB93455.1| hypothetical protein HMPREF9450_00226 [Alistipes indistinctus YIT
12060]
Length = 252
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 48/86 (55%), Gaps = 11/86 (12%)
Query: 69 LLGDQYLP----ERKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEG 124
L+G P E K A+ FG DGTT+NT + +KAV ++ + GG +L G
Sbjct: 13 LIGTAVSPVSAKEYKAAL----FGVKSDGTTNNTRSIQKAVDFIS---ENGGGELAFYVG 65
Query: 125 LWLTGSFNLTSNFTLFLERGAVMLGS 150
+LTG+ +L SN T+ ++ GA ++ S
Sbjct: 66 RYLTGTIHLKSNVTIVIKEGAALMAS 91
>gi|399032800|ref|ZP_10732032.1| endopolygalacturonase [Flavobacterium sp. CF136]
gi|398068822|gb|EJL60216.1| endopolygalacturonase [Flavobacterium sp. CF136]
Length = 456
Score = 48.9 bits (115), Expect = 6e-04, Method: Composition-based stats.
Identities = 27/69 (39%), Positives = 35/69 (50%), Gaps = 3/69 (4%)
Query: 83 SIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFLE 142
SI DFG V +EA KA+ GG + +PEG WLT + SN L L
Sbjct: 54 SIVDFGAVQGNKNKTSEAINKAISKAN---KAGGGVVVIPEGEWLTKKIHFKSNVNLHLN 110
Query: 143 RGAVMLGSQ 151
+GAV+L S+
Sbjct: 111 KGAVLLFSE 119
>gi|380693882|ref|ZP_09858741.1| hypothetical protein BfaeM_07848 [Bacteroides faecis MAJ27]
Length = 454
Score = 48.9 bits (115), Expect = 6e-04, Method: Composition-based stats.
Identities = 28/72 (38%), Positives = 36/72 (50%), Gaps = 5/72 (6%)
Query: 76 PERKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTS 135
PE+ I DFG V G +NT+A A+ GG ++ VP G WLTG + S
Sbjct: 40 PEQD--FKITDFGAVPGGEVNNTQAIAAAI---DACNKAGGGRVVVPAGTWLTGPVHFKS 94
Query: 136 NFTLFLERGAVM 147
N L LE AV+
Sbjct: 95 NVNLCLEENAVL 106
>gi|218259494|ref|ZP_03475217.1| hypothetical protein PRABACTJOHN_00875 [Parabacteroides johnsonii
DSM 18315]
gi|218225087|gb|EEC97737.1| hypothetical protein PRABACTJOHN_00875 [Parabacteroides johnsonii
DSM 18315]
Length = 250
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 45/82 (54%), Gaps = 11/82 (13%)
Query: 67 AGLLGDQYLPERKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLW 126
AGL Y +VAM FG DG T NT + ++AV Y+ G +GG +L G +
Sbjct: 18 AGLSAKDY----QVAM----FGIKSDGVTLNTRSIQRAVDYISG---QGGGRLVFYVGRY 66
Query: 127 LTGSFNLTSNFTLFLERGAVML 148
LTGS L SN T+ +E GA ++
Sbjct: 67 LTGSIELKSNVTIRIEEGATLV 88
>gi|262408407|ref|ZP_06084954.1| pectate lyase [Bacteroides sp. 2_1_22]
gi|294646414|ref|ZP_06724057.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CC 2a]
gi|294807852|ref|ZP_06766636.1| polygalacturonase (pectinase) [Bacteroides xylanisolvens SD CC 1b]
gi|345508621|ref|ZP_08788247.1| pectate lyase [Bacteroides sp. D1]
gi|229445709|gb|EEO51500.1| pectate lyase [Bacteroides sp. D1]
gi|262353959|gb|EEZ03052.1| pectate lyase [Bacteroides sp. 2_1_22]
gi|292638241|gb|EFF56616.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CC 2a]
gi|294444947|gb|EFG13630.1| polygalacturonase (pectinase) [Bacteroides xylanisolvens SD CC 1b]
Length = 460
Score = 48.9 bits (115), Expect = 6e-04, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 35/64 (54%), Gaps = 3/64 (4%)
Query: 84 IKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFLER 143
I D+G G +NT+A A+ + GG ++ VP G+WLTG + SN L+LE
Sbjct: 54 ITDYGAKNGGKVNNTKAIAAAI---EACHKSGGGRVVVPAGIWLTGPIHFKSNVNLYLEE 110
Query: 144 GAVM 147
A++
Sbjct: 111 NAIL 114
>gi|168063573|ref|XP_001783745.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162664751|gb|EDQ51459.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 460
Score = 48.9 bits (115), Expect = 6e-04, Method: Composition-based stats.
Identities = 24/67 (35%), Positives = 40/67 (59%), Gaps = 3/67 (4%)
Query: 84 IKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFLER 143
+ DFG G+G +T A + ++ Y ++GG + V G LTG+ L SN TL++++
Sbjct: 35 VSDFGATGNGEVYDTSAIQSSIDYC---ANQGGGVVYVSPGENLTGTLYLKSNITLWVDK 91
Query: 144 GAVMLGS 150
GA ++GS
Sbjct: 92 GATIVGS 98
>gi|381180485|ref|ZP_09889325.1| glycoside hydrolase family 28 [Treponema saccharophilum DSM 2985]
gi|380767666|gb|EIC01665.1| glycoside hydrolase family 28 [Treponema saccharophilum DSM 2985]
Length = 453
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 37/64 (57%), Gaps = 3/64 (4%)
Query: 82 MSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFL 141
+ I DFGG GDG +N+ AF A + GG +L VP+G+W +G + S+ TL L
Sbjct: 4 VKIDDFGGKGDGKFNNSNAFALAFAEIS---RNGGGKLTVPKGVWASGPIEIPSDTTLEL 60
Query: 142 ERGA 145
E G+
Sbjct: 61 EEGS 64
>gi|379727941|ref|YP_005320126.1| polygalacturonase [Melissococcus plutonius DAT561]
gi|376318844|dbj|BAL62631.1| polygalacturonase [Melissococcus plutonius DAT561]
Length = 442
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 39/67 (58%), Gaps = 3/67 (4%)
Query: 82 MSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFL 141
+S++DF + DG + +T+AF A++ + +GG + VP G +LTG L SN +
Sbjct: 6 ISLQDFSPIADGISLDTKAFEAAIKVAE---RQGGGHIVVPPGTYLTGPIRLISNLVFEI 62
Query: 142 ERGAVML 148
+ GA +L
Sbjct: 63 QAGATLL 69
>gi|336404054|ref|ZP_08584754.1| hypothetical protein HMPREF0127_02067 [Bacteroides sp. 1_1_30]
gi|335943751|gb|EGN05584.1| hypothetical protein HMPREF0127_02067 [Bacteroides sp. 1_1_30]
Length = 460
Score = 48.9 bits (115), Expect = 7e-04, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 35/64 (54%), Gaps = 3/64 (4%)
Query: 84 IKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFLER 143
I D+G G +NT+A A+ + GG ++ VP G+WLTG + SN L+LE
Sbjct: 54 ITDYGAKNGGEVNNTKAIAAAI---EACHKSGGGRVVVPAGIWLTGPIHFKSNVNLYLEE 110
Query: 144 GAVM 147
A++
Sbjct: 111 NAIL 114
>gi|298482100|ref|ZP_07000288.1| glycoside Hydrolase Family 28 [Bacteroides sp. D22]
gi|298271657|gb|EFI13230.1| glycoside Hydrolase Family 28 [Bacteroides sp. D22]
Length = 460
Score = 48.9 bits (115), Expect = 7e-04, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 35/64 (54%), Gaps = 3/64 (4%)
Query: 84 IKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFLER 143
I D+G G +NT+A A+ + GG ++ VP G+WLTG + SN L+LE
Sbjct: 54 ITDYGAKNGGEVNNTKAIAAAI---EACHKSGGGRVVVPAGIWLTGPIHFKSNVNLYLEE 110
Query: 144 GAVM 147
A++
Sbjct: 111 NAIL 114
>gi|295086705|emb|CBK68228.1| Endopolygalacturonase [Bacteroides xylanisolvens XB1A]
Length = 460
Score = 48.9 bits (115), Expect = 7e-04, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 35/64 (54%), Gaps = 3/64 (4%)
Query: 84 IKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFLER 143
I D+G G +NT+A A+ + GG ++ VP G+WLTG + SN L+LE
Sbjct: 54 ITDYGAKNGGEVNNTKAIAAAI---EACHKSGGGRVVVPAGIWLTGPIHFKSNVNLYLEE 110
Query: 144 GAVM 147
A++
Sbjct: 111 NAIL 114
>gi|9437306|emb|CAB99319.1| polygalacturonase [Erwinia chrysanthemi]
Length = 606
Score = 48.9 bits (115), Expect = 7e-04, Method: Composition-based stats.
Identities = 27/69 (39%), Positives = 43/69 (62%), Gaps = 5/69 (7%)
Query: 82 MSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFL 141
++I ++G GDGTT NT A +KA+ G ++++P G++ TG+ L S+ TL L
Sbjct: 154 INITEYGAKGDGTTLNTTAIQKAIDAC-----PTGCRVDIPAGVFKTGALWLKSDMTLNL 208
Query: 142 ERGAVMLGS 150
+GA +LGS
Sbjct: 209 LQGATLLGS 217
>gi|312127381|ref|YP_003992255.1| glycoside hydrolase family 28 [Caldicellulosiruptor hydrothermalis
108]
gi|311777400|gb|ADQ06886.1| glycoside hydrolase family 28 [Caldicellulosiruptor hydrothermalis
108]
Length = 454
Score = 48.9 bits (115), Expect = 7e-04, Method: Composition-based stats.
Identities = 25/64 (39%), Positives = 38/64 (59%), Gaps = 3/64 (4%)
Query: 84 IKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFLER 143
+ DFG DG + +TEA +KA+ + GG + +P G++L+ L SN TL+LE
Sbjct: 16 VTDFGAKPDGVSFSTEAIQKAI---DTCFENGGGVVVIPAGIYLSRPIRLKSNVTLYLEE 72
Query: 144 GAVM 147
GAV+
Sbjct: 73 GAVI 76
>gi|255036065|ref|YP_003086686.1| glycoside hydrolase [Dyadobacter fermentans DSM 18053]
gi|254948821|gb|ACT93521.1| glycoside hydrolase family 28 [Dyadobacter fermentans DSM 18053]
Length = 455
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 37/68 (54%), Gaps = 3/68 (4%)
Query: 84 IKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFLER 143
I DFG V + A R+A+ GG ++ VP G WLTG +L SN L L++
Sbjct: 56 ITDFGAVAGDKEKISGAIRQAI---DAANQAGGGKVVVPAGEWLTGKVHLKSNVNLHLDK 112
Query: 144 GAVMLGSQ 151
GAV+L S+
Sbjct: 113 GAVLLFSE 120
>gi|307133006|ref|YP_003885022.1| polygalacturonase [Dickeya dadantii 3937]
gi|306530535|gb|ADN00466.1| polygalacturonase [Dickeya dadantii 3937]
Length = 606
Score = 48.9 bits (115), Expect = 7e-04, Method: Composition-based stats.
Identities = 27/69 (39%), Positives = 43/69 (62%), Gaps = 5/69 (7%)
Query: 82 MSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFL 141
++I ++G GDGTT NT A +KA+ G ++++P G++ TG+ L S+ TL L
Sbjct: 154 INITEYGAKGDGTTLNTTAIQKAIDAC-----PTGCRVDIPAGVFKTGALWLKSDMTLNL 208
Query: 142 ERGAVMLGS 150
+GA +LGS
Sbjct: 209 LQGATLLGS 217
>gi|302871635|ref|YP_003840271.1| glycoside hydrolase family protein [Caldicellulosiruptor
obsidiansis OB47]
gi|302574494|gb|ADL42285.1| glycoside hydrolase family 28 [Caldicellulosiruptor obsidiansis
OB47]
Length = 454
Score = 48.9 bits (115), Expect = 7e-04, Method: Composition-based stats.
Identities = 25/64 (39%), Positives = 38/64 (59%), Gaps = 3/64 (4%)
Query: 84 IKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFLER 143
+ DFG DG + +TEA +KA+ + GG + +P G++L+ L SN TL+LE
Sbjct: 16 VTDFGAKPDGVSFSTEAIQKAIDIC---FENGGGVVVIPAGIYLSRPIRLKSNVTLYLEE 72
Query: 144 GAVM 147
GAV+
Sbjct: 73 GAVI 76
>gi|254295110|ref|YP_003061133.1| glycoside hydrolase family protein [Hirschia baltica ATCC 49814]
gi|254043641|gb|ACT60436.1| glycoside hydrolase family 28 [Hirschia baltica ATCC 49814]
Length = 469
Score = 48.9 bits (115), Expect = 7e-04, Method: Composition-based stats.
Identities = 27/72 (37%), Positives = 38/72 (52%), Gaps = 3/72 (4%)
Query: 79 KVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFT 138
K + DF GDG NT AF+ A+ + GG Q+ VP+G +LTG+ L SN
Sbjct: 52 KAQFLLTDFDARGDGIFDNTAAFKAAIDACR---KAGGGQIRVPDGHYLTGAIQLHSNIE 108
Query: 139 LFLERGAVMLGS 150
L + GA ++ S
Sbjct: 109 LNVSAGARLIFS 120
>gi|302811076|ref|XP_002987228.1| hypothetical protein SELMODRAFT_125526 [Selaginella moellendorffii]
gi|300145125|gb|EFJ11804.1| hypothetical protein SELMODRAFT_125526 [Selaginella moellendorffii]
Length = 469
Score = 48.5 bits (114), Expect = 8e-04, Method: Composition-based stats.
Identities = 25/68 (36%), Positives = 39/68 (57%), Gaps = 2/68 (2%)
Query: 83 SIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFLE 142
++ DFG V DG T +T A + A+ Y + L+ P G +LTG+ L SN + ++
Sbjct: 44 NVLDFGAVADGKTIDTSAIQSAIDYCAW--KARASSLHFPPGKYLTGALFLASNMAVVID 101
Query: 143 RGAVMLGS 150
GA++LGS
Sbjct: 102 PGAIILGS 109
>gi|383110681|ref|ZP_09931500.1| hypothetical protein BSGG_1790 [Bacteroides sp. D2]
gi|423215185|ref|ZP_17201713.1| hypothetical protein HMPREF1074_03245 [Bacteroides xylanisolvens
CL03T12C04]
gi|382949458|gb|EFS31090.2| hypothetical protein BSGG_1790 [Bacteroides sp. D2]
gi|392692448|gb|EIY85686.1| hypothetical protein HMPREF1074_03245 [Bacteroides xylanisolvens
CL03T12C04]
Length = 470
Score = 48.5 bits (114), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 38/67 (56%), Gaps = 3/67 (4%)
Query: 84 IKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFLER 143
I +G GDG T NT A A+ Y + GG + +P+G +L+G+ L N +L L +
Sbjct: 33 ICKYGAKGDGKTLNTNAINSAIEYC---AENGGGTVLIPKGTFLSGTIYLKDNISLVLRK 89
Query: 144 GAVMLGS 150
GAV+ G+
Sbjct: 90 GAVLKGT 96
>gi|222529558|ref|YP_002573440.1| glycoside hydrolase family protein [Caldicellulosiruptor bescii DSM
6725]
gi|222456405|gb|ACM60667.1| glycoside hydrolase family 28 [Caldicellulosiruptor bescii DSM
6725]
Length = 443
Score = 48.5 bits (114), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 37/64 (57%), Gaps = 3/64 (4%)
Query: 84 IKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFLER 143
+ DFG GDG + TE +KA+ + GG + +P G++L+ L SN TL+LE
Sbjct: 5 VTDFGAKGDGVSFCTEVIQKAI---DTCFENGGGVVVIPAGIYLSRPIRLKSNVTLYLEE 61
Query: 144 GAVM 147
GAV+
Sbjct: 62 GAVI 65
>gi|168034210|ref|XP_001769606.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162679148|gb|EDQ65599.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 411
Score = 48.5 bits (114), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 40/67 (59%), Gaps = 3/67 (4%)
Query: 84 IKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFLER 143
+ FG G+G +T + + + ++GG +++P G +LTG+ +L SN TL++E
Sbjct: 1 VTRFGATGNGRVYDTIPIQSCIDHC---AEQGGGVVHIPPGTYLTGTIHLRSNITLWVEE 57
Query: 144 GAVMLGS 150
GA ++GS
Sbjct: 58 GATIMGS 64
>gi|373954236|ref|ZP_09614196.1| glycoside hydrolase family 28 [Mucilaginibacter paludis DSM 18603]
gi|373890836|gb|EHQ26733.1| glycoside hydrolase family 28 [Mucilaginibacter paludis DSM 18603]
Length = 545
Score = 48.5 bits (114), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 38/70 (54%), Gaps = 3/70 (4%)
Query: 78 RKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNF 137
+K +I +G V DG T NT++ A+ GG + +P+GLW+TG L SN
Sbjct: 40 KKDTFNIIKYGAVADGITLNTKSINNAI---DACSKNGGGVVLIPQGLWMTGPIVLKSNV 96
Query: 138 TLFLERGAVM 147
L ++R A++
Sbjct: 97 NLHIDRAAMV 106
>gi|333382502|ref|ZP_08474172.1| hypothetical protein HMPREF9455_02338 [Dysgonomonas gadei ATCC
BAA-286]
gi|332828813|gb|EGK01505.1| hypothetical protein HMPREF9455_02338 [Dysgonomonas gadei ATCC
BAA-286]
Length = 496
Score = 48.5 bits (114), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 41/71 (57%), Gaps = 3/71 (4%)
Query: 80 VAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTL 139
V ++KD+G GDGT ++ A +A+ + GG + P G +L+ S L SN TL
Sbjct: 23 VFYNVKDYGAKGDGTQIDSPAINRAI---EDAAKNGGGTIFFPAGTYLSYSVRLQSNITL 79
Query: 140 FLERGAVMLGS 150
+L+ G+V+L +
Sbjct: 80 YLDAGSVLLAA 90
>gi|312130362|ref|YP_003997702.1| glycoside hydrolase [Leadbetterella byssophila DSM 17132]
gi|311906908|gb|ADQ17349.1| glycoside hydrolase family 28 [Leadbetterella byssophila DSM 17132]
Length = 775
Score = 48.5 bits (114), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 38/70 (54%), Gaps = 3/70 (4%)
Query: 78 RKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNF 137
RK +I +G DG T NT A +A+ + GG + +P G+W+TG L SN
Sbjct: 264 RKDTFNIVRYGAKADGFTVNTTAIAQAIDLAH---EAGGGTVLIPAGVWVTGPLKLKSNV 320
Query: 138 TLFLERGAVM 147
L L++GA++
Sbjct: 321 NLHLQKGALL 330
>gi|262383965|ref|ZP_06077101.1| glycoside hydrolase family 28 [Bacteroides sp. 2_1_33B]
gi|262294863|gb|EEY82795.1| glycoside hydrolase family 28 [Bacteroides sp. 2_1_33B]
Length = 446
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 37/67 (55%), Gaps = 3/67 (4%)
Query: 83 SIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFLE 142
+I DFG GDG T NT+ + + + +GG + +PEG +LTGS L S FLE
Sbjct: 37 NIVDFGAKGDGITDNTQFINRTI---EACSLRGGGTVIIPEGTFLTGSILLKSKVNFFLE 93
Query: 143 RGAVMLG 149
AV+ G
Sbjct: 94 SNAVVKG 100
>gi|373953358|ref|ZP_09613318.1| glycoside hydrolase family 28 [Mucilaginibacter paludis DSM 18603]
gi|373889958|gb|EHQ25855.1| glycoside hydrolase family 28 [Mucilaginibacter paludis DSM 18603]
Length = 523
Score = 48.5 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 25/67 (37%), Positives = 36/67 (53%), Gaps = 3/67 (4%)
Query: 84 IKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFLER 143
I +G + DG T NT A +KA+ + GG + +P G ++TG NL SN L E
Sbjct: 39 ITRYGALPDGKTDNTLAIQKAINTA---AENGGGTVLIPAGQFVTGVINLKSNINLHFEN 95
Query: 144 GAVMLGS 150
GA +L +
Sbjct: 96 GAALLAT 102
>gi|402494826|ref|ZP_10841562.1| polygalacturonase [Aquimarina agarilytica ZC1]
Length = 465
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 42/69 (60%), Gaps = 4/69 (5%)
Query: 83 SIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGL-WLTGSFNLTSNFTLFL 141
++ D+G VG+G +T+A +KA+ +GG ++ +P G L G+ L N TL+L
Sbjct: 25 NVLDYGAVGNGIQKDTQAVQKAIDMATA---QGGGKVIIPSGKKVLIGTIFLKDNVTLYL 81
Query: 142 ERGAVMLGS 150
E GAV+LGS
Sbjct: 82 ENGAVLLGS 90
>gi|375144070|ref|YP_005006511.1| glycoside hydrolase family protein [Niastella koreensis GR20-10]
gi|361058116|gb|AEV97107.1| glycoside hydrolase family 28 [Niastella koreensis GR20-10]
Length = 511
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 38/67 (56%), Gaps = 3/67 (4%)
Query: 84 IKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFLER 143
I FG GD +T+NT A +KA+ GG ++ +P G ++TG NL SN L +
Sbjct: 26 ITTFGAKGDSSTNNTVAIQKAIDEASA---NGGGRVVIPAGRFVTGVLNLKSNVELHVSA 82
Query: 144 GAVMLGS 150
A++LGS
Sbjct: 83 NAMLLGS 89
>gi|242237658|ref|YP_002985839.1| glycoside hydrolase family protein [Dickeya dadantii Ech703]
gi|242129715|gb|ACS84017.1| glycoside hydrolase family 28 [Dickeya dadantii Ech703]
Length = 605
Score = 48.1 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 26/70 (37%), Positives = 41/70 (58%), Gaps = 5/70 (7%)
Query: 82 MSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFL 141
++I +G GDGTT NT A + A+ G ++++P G++ TG+ L S+ TL L
Sbjct: 153 INITHYGAKGDGTTLNTTAIQNAINACNT-----GCRIDIPAGVFKTGALWLKSDMTLNL 207
Query: 142 ERGAVMLGSQ 151
GA +LGS+
Sbjct: 208 MEGATLLGSE 217
>gi|251787804|ref|YP_003002525.1| glycoside hydrolase family 28 [Dickeya zeae Ech1591]
gi|247536425|gb|ACT05046.1| glycoside hydrolase family 28 [Dickeya zeae Ech1591]
Length = 604
Score = 48.1 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 27/69 (39%), Positives = 42/69 (60%), Gaps = 5/69 (7%)
Query: 82 MSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFL 141
++I +G GDGTT NT A +KA+ Q G ++++P G++ G+ L S+ TL L
Sbjct: 152 INITQYGAKGDGTTLNTAAIQKAIDACQI-----GCRVDIPPGVFKIGALWLKSDMTLNL 206
Query: 142 ERGAVMLGS 150
+GA +LGS
Sbjct: 207 LQGATLLGS 215
>gi|160881342|ref|YP_001560310.1| glycoside hydrolase family protein [Clostridium phytofermentans
ISDg]
gi|160430008|gb|ABX43571.1| glycoside hydrolase family 28 [Clostridium phytofermentans ISDg]
Length = 491
Score = 48.1 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 30/76 (39%), Positives = 42/76 (55%), Gaps = 11/76 (14%)
Query: 78 RKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKG---GAQLNVPEGLWLTGSFNLT 134
RKV +I D+G V DG T+N +KA+ D+ G Q+ VP G +L+G+ L
Sbjct: 47 RKV-YNILDYGAVADGVTNNAATIQKAI-------DEATIHGGQVVVPAGNYLSGTIILK 98
Query: 135 SNFTLFLERGAVMLGS 150
SN LE GAV++ S
Sbjct: 99 SNIDFHLEMGAVLISS 114
>gi|302789251|ref|XP_002976394.1| hypothetical protein SELMODRAFT_105243 [Selaginella moellendorffii]
gi|300156024|gb|EFJ22654.1| hypothetical protein SELMODRAFT_105243 [Selaginella moellendorffii]
Length = 469
Score = 48.1 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 25/68 (36%), Positives = 39/68 (57%), Gaps = 2/68 (2%)
Query: 83 SIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFLE 142
++ DFG V DG T +T A + A+ Y + L+ P G +LTG+ L SN + ++
Sbjct: 44 NVLDFGAVADGKTIDTSAIQSAIDYCAW--KARASSLHFPPGKYLTGAVFLASNMAVVID 101
Query: 143 RGAVMLGS 150
GA++LGS
Sbjct: 102 PGAIILGS 109
>gi|52081815|ref|YP_080606.1| glycoside hydrolase family protein [Bacillus licheniformis DSM 13 =
ATCC 14580]
gi|319647732|ref|ZP_08001950.1| hypothetical protein HMPREF1012_02989 [Bacillus sp. BT1B_CT2]
gi|404490699|ref|YP_006714805.1| glycoside hydrolase [Bacillus licheniformis DSM 13 = ATCC 14580]
gi|423683814|ref|ZP_17658653.1| glycoside hydrolase family protein [Bacillus licheniformis WX-02]
gi|52005026|gb|AAU24968.1| Glycoside Hydrolase Family 28 [Bacillus licheniformis DSM 13 = ATCC
14580]
gi|52349704|gb|AAU42338.1| putative glycoside hydrolase [Bacillus licheniformis DSM 13 = ATCC
14580]
gi|317390073|gb|EFV70882.1| hypothetical protein HMPREF1012_02989 [Bacillus sp. BT1B_CT2]
gi|383440588|gb|EID48363.1| glycoside hydrolase family protein [Bacillus licheniformis WX-02]
Length = 436
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 42/77 (54%), Gaps = 5/77 (6%)
Query: 75 LPERKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLT 134
P R + + FG +G +TEA +KA+ GG ++ VPEG++L+G+ L
Sbjct: 19 FPNR--SFDVTSFGADENGKNDSTEAIQKAIDQAH---QAGGGRVTVPEGVFLSGALRLK 73
Query: 135 SNFTLFLERGAVMLGSQ 151
SN L + +GAV+ SQ
Sbjct: 74 SNVDLHIAKGAVIKFSQ 90
>gi|325106070|ref|YP_004275724.1| glycoside hydrolase family protein [Pedobacter saltans DSM 12145]
gi|324974918|gb|ADY53902.1| glycoside hydrolase family 28 [Pedobacter saltans DSM 12145]
Length = 552
Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 25/70 (35%), Positives = 38/70 (54%), Gaps = 3/70 (4%)
Query: 78 RKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNF 137
+K +I ++G DG + NT+A KA+ KGG + VP G WLTG L +N
Sbjct: 42 KKDTFNITNYGAKPDGISLNTDAINKAI---SDCSKKGGGVVLVPNGYWLTGPIKLQNNV 98
Query: 138 TLFLERGAVM 147
L L++ A++
Sbjct: 99 NLHLKKNALL 108
>gi|255530629|ref|YP_003091001.1| glycoside hydrolase family protein [Pedobacter heparinus DSM 2366]
gi|255343613|gb|ACU02939.1| glycoside hydrolase family 28 [Pedobacter heparinus DSM 2366]
Length = 559
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 44/78 (56%), Gaps = 4/78 (5%)
Query: 73 QYLPERKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFN 132
Q +P++ + +I+D+G GDG + +T A + A+ GG + +P G++L+G+
Sbjct: 38 QEIPKQDI-YNIRDYGAKGDGESLDTVAIQAAIDACNA---AGGGTVFIPTGVFLSGTLQ 93
Query: 133 LTSNFTLFLERGAVMLGS 150
L SN T L G +LGS
Sbjct: 94 LKSNVTFHLSAGGKLLGS 111
>gi|21628922|gb|AAM28240.1| polygalacturonase [Meloidogyne incognita]
Length = 633
Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 24/64 (37%), Positives = 36/64 (56%)
Query: 84 IKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFLER 143
I FG GDGTT NT+A +KA+ G ++ +P+G++L+G L S T L
Sbjct: 174 ITTFGATGDGTTLNTQAIQKAIDSCSSSTSAFGCKVLIPKGIFLSGPLFLRSQMTFELAN 233
Query: 144 GAVM 147
GA++
Sbjct: 234 GAIL 237
>gi|4996612|dbj|BAA78557.1| polygalacturonase [Prevotella ruminicola]
Length = 494
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 39/68 (57%), Gaps = 3/68 (4%)
Query: 83 SIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFLE 142
+IK +G D T +T A ++A+ D GG ++ VP G++ G+ L S+ L+LE
Sbjct: 49 NIKSYGAKNDTTVLSTHALQQAI---DACSDAGGGRVVVPAGIYKIGTIQLKSHVHLYLE 105
Query: 143 RGAVMLGS 150
+GA + GS
Sbjct: 106 QGATLYGS 113
>gi|197105922|ref|YP_002131299.1| exo-poly-alpha-D-galacturonosidase [Phenylobacterium zucineum HLK1]
gi|196479342|gb|ACG78870.1| exo-poly-alpha-D-galacturonosidase [Phenylobacterium zucineum HLK1]
Length = 470
Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 27/74 (36%), Positives = 40/74 (54%), Gaps = 5/74 (6%)
Query: 75 LPERKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLT 134
P+R I DFG G+ ++EAF +A+ GG ++ VP G WLTG +L
Sbjct: 43 FPDRD--FPITDFGADGEAVADSSEAFARAIAACH---AAGGGRVVVPPGWWLTGPIHLK 97
Query: 135 SNFTLFLERGAVML 148
SN L +++GA +L
Sbjct: 98 SNVNLHVQKGATIL 111
>gi|150388731|ref|YP_001318780.1| glycoside hydrolase [Alkaliphilus metalliredigens QYMF]
gi|149948593|gb|ABR47121.1| glycoside hydrolase, family 28 [Alkaliphilus metalliredigens QYMF]
Length = 519
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 40/72 (55%), Gaps = 5/72 (6%)
Query: 80 VAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTL 139
V +++KDFG G G +T + + A+ G ++ +PEG +LT L SN TL
Sbjct: 82 VTLNVKDFGATGTGEKHDTASLQAAIMSCPPSG-----RVLIPEGTYLTAPLYLKSNITL 136
Query: 140 FLERGAVMLGSQ 151
+++GA +LGS
Sbjct: 137 EIQKGAKLLGSN 148
>gi|427383838|ref|ZP_18880558.1| hypothetical protein HMPREF9447_01591 [Bacteroides oleiciplenus YIT
12058]
gi|425728543|gb|EKU91401.1| hypothetical protein HMPREF9447_01591 [Bacteroides oleiciplenus YIT
12058]
Length = 1068
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 36/73 (49%), Gaps = 5/73 (6%)
Query: 75 LPERKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLT 134
P R I +G + DG T+NT+A +A+ GG ++ VP G WLTG +
Sbjct: 50 FPNRD--FPINKYGAIADGKTNNTKAIARAI---AACSRAGGGRVVVPAGEWLTGPIHFK 104
Query: 135 SNFTLFLERGAVM 147
SN L L AV+
Sbjct: 105 SNVNLHLSENAVL 117
>gi|16124826|ref|NP_419390.1| hypothetical protein CC_0572 [Caulobacter crescentus CB15]
gi|221233545|ref|YP_002515981.1| polygalacturonase [Caulobacter crescentus NA1000]
gi|13421768|gb|AAK22558.1| conserved hypothetical protein [Caulobacter crescentus CB15]
gi|220962717|gb|ACL94073.1| polygalacturonase [Caulobacter crescentus NA1000]
Length = 527
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 43/75 (57%), Gaps = 4/75 (5%)
Query: 76 PERKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTS 135
P VA +++DFG GDG T ++ A +A+ Y ++GG + VP G + + +L S
Sbjct: 31 PTEAVA-NVRDFGAKGDGVTIDSPAIDRAIAYA---AERGGGTVLVPAGTYACYTIHLKS 86
Query: 136 NFTLFLERGAVMLGS 150
L+L++GA +L +
Sbjct: 87 RIRLYLDQGATILAA 101
>gi|333897861|ref|YP_004471735.1| polygalacturonase [Thermoanaerobacterium xylanolyticum LX-11]
gi|333113126|gb|AEF18063.1| Polygalacturonase [Thermoanaerobacterium xylanolyticum LX-11]
Length = 518
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 42/70 (60%), Gaps = 5/70 (7%)
Query: 82 MSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFL 141
+++KDFG VGDG +T + + A+ G ++ PEG++LT L SN T+ L
Sbjct: 84 INVKDFGAVGDGKRLDTFSIQAAI-----MACPDGGRVYFPEGVYLTYPIFLKSNITIEL 138
Query: 142 ERGAVMLGSQ 151
+GAV+LG++
Sbjct: 139 GKGAVLLGAK 148
>gi|338211743|ref|YP_004655796.1| Exo-poly-alpha-galacturonosidase [Runella slithyformis DSM 19594]
gi|336305562|gb|AEI48664.1| Exo-poly-alpha-galacturonosidase [Runella slithyformis DSM 19594]
Length = 781
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 39/79 (49%), Gaps = 4/79 (5%)
Query: 70 LGDQYLPE-RKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLT 128
L Y P RK +I +G DG T NT+A +A+ GG + VP GLWLT
Sbjct: 258 LPHHYTPVFRKDTFNICRYGAKADGLTVNTKAISQAIEACHA---AGGGTVLVPAGLWLT 314
Query: 129 GSFNLTSNFTLFLERGAVM 147
G L +N L + + A++
Sbjct: 315 GPIVLKNNVNLHIAKNALL 333
>gi|423725587|ref|ZP_17699703.1| hypothetical protein HMPREF1078_03592 [Parabacteroides merdae
CL09T00C40]
gi|409234034|gb|EKN26865.1| hypothetical protein HMPREF1078_03592 [Parabacteroides merdae
CL09T00C40]
Length = 493
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 86 DFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFLERGA 145
DFG DG T NT + +K + ++ +GG +L G + TG+ L SN TL LE GA
Sbjct: 28 DFGVKADGKTLNTSSIQKGIDFVNA---QGGGRLVFTAGNYQTGTIYLKSNVTLHLEEGA 84
Query: 146 VMLGS 150
+LGS
Sbjct: 85 TLLGS 89
>gi|423346854|ref|ZP_17324542.1| hypothetical protein HMPREF1060_02214 [Parabacteroides merdae
CL03T12C32]
gi|409219135|gb|EKN12099.1| hypothetical protein HMPREF1060_02214 [Parabacteroides merdae
CL03T12C32]
Length = 493
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 86 DFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFLERGA 145
DFG DG T NT + +K + ++ +GG +L G + TG+ L SN TL LE GA
Sbjct: 28 DFGVKADGKTLNTSSIQKGIDFVNA---QGGGRLVFTAGNYQTGTIYLKSNVTLHLEEGA 84
Query: 146 VMLGS 150
+LGS
Sbjct: 85 TLLGS 89
>gi|59044767|gb|AAW84066.1| pectate lyase [uncultured bacterium]
Length = 471
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 26/68 (38%), Positives = 38/68 (55%), Gaps = 3/68 (4%)
Query: 84 IKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFLER 143
+ +FG GDG T T AFR+A+ + GG ++ VP G +LTG+ +L SN L +
Sbjct: 57 LTEFGAKGDGRTDCTLAFRRAIDRCT---NAGGGRVVVPPGSYLTGAIHLKSNVDLHISE 113
Query: 144 GAVMLGSQ 151
G + SQ
Sbjct: 114 GTTVKFSQ 121
>gi|160892048|ref|ZP_02073051.1| hypothetical protein BACUNI_04508 [Bacteroides uniformis ATCC 8492]
gi|156858526|gb|EDO51957.1| polygalacturonase (pectinase) [Bacteroides uniformis ATCC 8492]
Length = 471
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 26/73 (35%), Positives = 38/73 (52%), Gaps = 5/73 (6%)
Query: 75 LPERKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLT 134
P+R I +G G NT+A KA+ G G ++ +P+G WLTG +L
Sbjct: 47 FPQRDFL--ITKYGAKAGGKKLNTKAIAKAITACHLVG---GGRVVIPKGEWLTGPIHLK 101
Query: 135 SNFTLFLERGAVM 147
SN L++E GAV+
Sbjct: 102 SNINLYMEEGAVL 114
>gi|150004702|ref|YP_001299446.1| glycoside hydrolase [Bacteroides vulgatus ATCC 8482]
gi|149933126|gb|ABR39824.1| glycoside hydrolase family 28 [Bacteroides vulgatus ATCC 8482]
Length = 471
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 26/73 (35%), Positives = 38/73 (52%), Gaps = 5/73 (6%)
Query: 75 LPERKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLT 134
P+R I +G G NT+A KA+ G G ++ +P+G WLTG +L
Sbjct: 47 FPQRDFL--ITKYGAKAGGKKLNTKAIAKAITACHLVG---GGRVVIPKGEWLTGPIHLK 101
Query: 135 SNFTLFLERGAVM 147
SN L++E GAV+
Sbjct: 102 SNINLYMEEGAVL 114
>gi|302672206|ref|YP_003832166.1| polygalacturonase Pgl28B [Butyrivibrio proteoclasticus B316]
gi|302396679|gb|ADL35584.1| polygalacturonase Pgl28B [Butyrivibrio proteoclasticus B316]
Length = 519
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 24/75 (32%), Positives = 44/75 (58%), Gaps = 5/75 (6%)
Query: 77 ERKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSN 136
+RK+ ++ + +GDG T NT A +KA+ + + P+G +LTG+ N+ SN
Sbjct: 93 KRKIDVTTSPYNALGDGKTLNTAALQKALDDCDE-----NSIVFFPKGTYLTGALNVHSN 147
Query: 137 FTLFLERGAVMLGSQ 151
++LE GA++ G++
Sbjct: 148 SEIYLEEGALLQGTE 162
>gi|255531482|ref|YP_003091854.1| glycoside hydrolase family protein [Pedobacter heparinus DSM 2366]
gi|255344466|gb|ACU03792.1| glycoside hydrolase family 28 [Pedobacter heparinus DSM 2366]
Length = 492
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 26/65 (40%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 86 DFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFLERGA 145
DFG DG T N+ + + A+ Y+ GG +L G +++G+ L SN TL LE GA
Sbjct: 25 DFGIQSDGKTLNSRSIQAAIDYIS---THGGGRLVFSAGSYVSGTIYLKSNVTLHLESGA 81
Query: 146 VMLGS 150
+LGS
Sbjct: 82 SILGS 86
>gi|332685997|ref|YP_004455771.1| polygalacturonase [Melissococcus plutonius ATCC 35311]
gi|332370006|dbj|BAK20962.1| polygalacturonase [Melissococcus plutonius ATCC 35311]
Length = 442
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 38/67 (56%), Gaps = 3/67 (4%)
Query: 82 MSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFL 141
+S++DF + DG + +T+AF A++ + +GG + P G +LTG L SN +
Sbjct: 6 ISLQDFSPIADGISLDTKAFEAAIKVAE---RQGGGHIVAPPGTYLTGPIRLISNLVFEI 62
Query: 142 ERGAVML 148
+ GA +L
Sbjct: 63 QAGATLL 69
>gi|340345895|ref|ZP_08669025.1| exo-poly-alpha-D-galacturonosidase [Prevotella dentalis DSM 3688]
gi|433651736|ref|YP_007278115.1| endopolygalacturonase [Prevotella dentalis DSM 3688]
gi|339612882|gb|EGQ17678.1| exo-poly-alpha-D-galacturonosidase [Prevotella dentalis DSM 3688]
gi|433302269|gb|AGB28085.1| endopolygalacturonase [Prevotella dentalis DSM 3688]
Length = 480
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 25/68 (36%), Positives = 39/68 (57%), Gaps = 3/68 (4%)
Query: 83 SIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFLE 142
+++ FG VG+GT ++ A A+ GG ++ +P G +L+GS L SN L LE
Sbjct: 23 NVRQFGAVGNGTVLDSRAINAAIDTAVF---HGGGRVVLPAGTYLSGSIRLKSNVELHLE 79
Query: 143 RGAVMLGS 150
GAV+L +
Sbjct: 80 PGAVLLAT 87
>gi|408501581|ref|YP_006865500.1| pectinesterase [Bifidobacterium asteroides PRL2011]
gi|408466405|gb|AFU71934.1| pectinesterase [Bifidobacterium asteroides PRL2011]
Length = 1519
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 45/76 (59%), Gaps = 7/76 (9%)
Query: 76 PERKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTS 135
P+R +++DFG GDG+T +T A +K + + + Q+ +P G +L+G+ NL S
Sbjct: 133 PKR---YNVRDFGASGDGSTKDTAAIQKTIDACK----EKNCQVYLPAGTYLSGALNLHS 185
Query: 136 NFTLFLERGAVMLGSQ 151
+ + F++ GA + S+
Sbjct: 186 DMSFFVDAGAQLKPSR 201
>gi|431798726|ref|YP_007225630.1| endopolygalacturonase [Echinicola vietnamensis DSM 17526]
gi|430789491|gb|AGA79620.1| endopolygalacturonase [Echinicola vietnamensis DSM 17526]
Length = 475
Score = 47.0 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 26/80 (32%), Positives = 46/80 (57%), Gaps = 5/80 (6%)
Query: 68 GLLGDQYLPERKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWL 127
GL+ P+++ SI+++G G +T+A A++ + GG ++ VP+G++L
Sbjct: 47 GLITVPEFPDQE--FSIEEYGAEAGGEVLSTDAIAAAIK---ACNEAGGGRVVVPKGVYL 101
Query: 128 TGSFNLTSNFTLFLERGAVM 147
TG+ +L SN L LE GA +
Sbjct: 102 TGAVHLLSNVNLHLEEGATL 121
>gi|224536297|ref|ZP_03676836.1| hypothetical protein BACCELL_01169 [Bacteroides cellulosilyticus
DSM 14838]
gi|224522091|gb|EEF91196.1| hypothetical protein BACCELL_01169 [Bacteroides cellulosilyticus
DSM 14838]
Length = 473
Score = 47.0 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 26/90 (28%), Positives = 45/90 (50%), Gaps = 3/90 (3%)
Query: 62 PDSCAAGLLGDQYLPERKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNV 121
PD +G P ++ ++ D+G GD + NT A +KA+ + GG +
Sbjct: 27 PDFFWMKKVGAMSYPVQQAVYNVTDYGAKGDALSMNTMAIQKAIDAAE---QAGGGIVVF 83
Query: 122 PEGLWLTGSFNLTSNFTLFLERGAVMLGSQ 151
G++LTGS + +N L + +G ++GSQ
Sbjct: 84 HPGIYLTGSLFVGNNVNLHISKGVTLIGSQ 113
>gi|146295704|ref|YP_001179475.1| glycoside hydrolase family protein [Caldicellulosiruptor
saccharolyticus DSM 8903]
gi|145409280|gb|ABP66284.1| glycoside hydrolase, family 28 [Caldicellulosiruptor
saccharolyticus DSM 8903]
Length = 454
Score = 47.0 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 25/64 (39%), Positives = 37/64 (57%), Gaps = 3/64 (4%)
Query: 84 IKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFLER 143
+ DFG DG + TEA +KA+ + GG + +P G++L+ L SN TL+LE
Sbjct: 16 VTDFGAKPDGLSFCTEAIQKAI---DTCFENGGGVVVIPAGIYLSRPIRLKSNVTLYLEE 72
Query: 144 GAVM 147
GAV+
Sbjct: 73 GAVI 76
>gi|198274117|ref|ZP_03206649.1| hypothetical protein BACPLE_00254 [Bacteroides plebeius DSM 17135]
gi|198273195|gb|EDY97464.1| polygalacturonase (pectinase) [Bacteroides plebeius DSM 17135]
Length = 479
Score = 47.0 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 25/68 (36%), Positives = 40/68 (58%), Gaps = 3/68 (4%)
Query: 83 SIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFLE 142
++KDFG VGDG ++EA +A+ +Q +GG + VP G + S L S L+LE
Sbjct: 25 NVKDFGAVGDGQHIDSEAINQAI--VQA-AREGGGTIYVPAGKYACYSIRLASQIHLYLE 81
Query: 143 RGAVMLGS 150
+GA ++ +
Sbjct: 82 QGATIVAA 89
>gi|388258052|ref|ZP_10135230.1| glycoside hydrolase family 28 [Cellvibrio sp. BR]
gi|387938173|gb|EIK44726.1| glycoside hydrolase family 28 [Cellvibrio sp. BR]
Length = 513
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 59/137 (43%), Gaps = 39/137 (28%)
Query: 23 ATIVLIVTLITIFS--------LEITKKSVLSPKRVGFSGADGAIFDPDSCAAGLLGDQY 74
A IVL+ +LIT+ + LE T+ +V +PK +
Sbjct: 38 AYIVLLASLITLPAQAGPNPTVLERTELTVAAPKNIN----------------------- 74
Query: 75 LPERKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLT 134
+ ++ DFG GDGTT +T A +KA+ A L + G +LTGS L
Sbjct: 75 ----ALEINASDFGAKGDGTTDDTNALQKAIDATAA----KKATLVLQPGTYLTGSLFLK 126
Query: 135 SNFTLFLERGAVMLGSQ 151
SN L L++G + G Q
Sbjct: 127 SNMALRLDKGVTLTGKQ 143
>gi|227538562|ref|ZP_03968611.1| conserved hypothetical protein [Sphingobacterium spiritivorum ATCC
33300]
gi|227241481|gb|EEI91496.1| conserved hypothetical protein [Sphingobacterium spiritivorum ATCC
33300]
Length = 647
Score = 46.6 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 25/75 (33%), Positives = 40/75 (53%), Gaps = 3/75 (4%)
Query: 76 PERKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTS 135
P + I +FG VGD T NT+A ++A+ GG + VP G +L+G+ +L +
Sbjct: 48 PVDSTSFLITNFGAVGDKVTLNTKAIQRAI---DSCATSGGGLVVVPAGNFLSGTIHLKT 104
Query: 136 NFTLFLERGAVMLGS 150
TL ++ G + GS
Sbjct: 105 GVTLHVQSGGTLFGS 119
>gi|307132357|ref|YP_003884373.1| Polygalacturonase [Dickeya dadantii 3937]
gi|306529886|gb|ADM99816.1| Polygalacturonase [Dickeya dadantii 3937]
Length = 459
Score = 46.6 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 25/73 (34%), Positives = 40/73 (54%), Gaps = 3/73 (4%)
Query: 78 RKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNF 137
+ + +SI+ + DG T +TE F++A+ + +GG L V G +L G L SNF
Sbjct: 14 KTMRLSIRSYTPAADGVTPDTELFQRAIDDLTA---QGGGTLVVEPGRYLLGGLRLPSNF 70
Query: 138 TLFLERGAVMLGS 150
L L+ GA ++ S
Sbjct: 71 CLQLDAGAELIAS 83
>gi|182415528|ref|YP_001820594.1| exo-poly-alpha-D-galacturonosidase [Opitutus terrae PB90-1]
gi|177842742|gb|ACB76994.1| exo-poly-alpha-D-galacturonosidase precursor [Opitutus terrae
PB90-1]
Length = 537
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 37/70 (52%), Gaps = 3/70 (4%)
Query: 82 MSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFL 141
MS++DFG GDG T +T A +A+ GG + P G +L+ S L S+ L L
Sbjct: 1 MSVRDFGATGDGVTLDTAAINRAI---TATAQAGGGVVEFPAGQYLSHSIRLQSHVELRL 57
Query: 142 ERGAVMLGSQ 151
E GA ++ +
Sbjct: 58 EPGATLIAAD 67
>gi|326799707|ref|YP_004317526.1| glycoside hydrolase [Sphingobacterium sp. 21]
gi|326550471|gb|ADZ78856.1| glycoside hydrolase family 28 [Sphingobacterium sp. 21]
Length = 517
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 42/77 (54%), Gaps = 3/77 (3%)
Query: 74 YLPERKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNL 133
++ + ++A+++ DFG D + T A ++A+ GG + P G +LTG +L
Sbjct: 15 FVAQAQLALNVLDFGAKNDSSALATTAIKEAIAKAS---QAGGGTIYFPPGTYLTGPIHL 71
Query: 134 TSNFTLFLERGAVMLGS 150
SN TLF+E GA + S
Sbjct: 72 KSNITLFIEAGAELCFS 88
>gi|198276929|ref|ZP_03209460.1| hypothetical protein BACPLE_03134 [Bacteroides plebeius DSM 17135]
gi|198270454|gb|EDY94724.1| polygalacturonase (pectinase) [Bacteroides plebeius DSM 17135]
Length = 461
Score = 46.6 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 25/64 (39%), Positives = 34/64 (53%), Gaps = 3/64 (4%)
Query: 84 IKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFLER 143
I +G NT+AF KA+ + GG ++ VP G W TG +L S+ LFLE
Sbjct: 38 ITKYGARKGNNHLNTQAFAKAI---EACNRAGGGRVVVPAGEWFTGPIHLKSHVNLFLEE 94
Query: 144 GAVM 147
GAV+
Sbjct: 95 GAVV 98
>gi|452973315|gb|EME73137.1| glycoside hydrolase [Bacillus sonorensis L12]
Length = 436
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 43/77 (55%), Gaps = 5/77 (6%)
Query: 75 LPERKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLT 134
P+R+ + FG G T +T AF++A+ KGG ++ VP+G++LTG+ L
Sbjct: 19 FPDRR--FDVTRFGADSGGKTDSTAAFQQAIDEAH---QKGGGRVTVPKGVFLTGALRLK 73
Query: 135 SNFTLFLERGAVMLGSQ 151
SN L + + AV+ SQ
Sbjct: 74 SNVELHVTKDAVIRFSQ 90
>gi|393789566|ref|ZP_10377687.1| hypothetical protein HMPREF1068_03967 [Bacteroides nordii
CL02T12C05]
gi|392651014|gb|EIY44680.1| hypothetical protein HMPREF1068_03967 [Bacteroides nordii
CL02T12C05]
Length = 487
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 36/71 (50%), Gaps = 3/71 (4%)
Query: 80 VAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTL 139
V + I G GDG T NT +KAV KGG + +P G +L L SN L
Sbjct: 23 VTIDITKRGAKGDGVTDNTVVIQKAVDECSA---KGGGTVLIPSGTYLIRPIELKSNVNL 79
Query: 140 FLERGAVMLGS 150
L+ GA++LGS
Sbjct: 80 HLDFGALVLGS 90
>gi|313114438|ref|ZP_07799963.1| polygalacturonase [Faecalibacterium cf. prausnitzii KLE1255]
gi|310623236|gb|EFQ06666.1| polygalacturonase [Faecalibacterium cf. prausnitzii KLE1255]
Length = 510
Score = 46.6 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 29/63 (46%), Positives = 37/63 (58%), Gaps = 5/63 (7%)
Query: 87 FGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFLERGAV 146
+G V DGTT NT + A+ KGG + VP G + T S L SN TL+LE+GAV
Sbjct: 79 YGLVADGTTDNTLKLQAALSTCP----KGGT-VYVPAGRYRTCSLFLKSNTTLYLEKGAV 133
Query: 147 MLG 149
+LG
Sbjct: 134 LLG 136
>gi|167523647|ref|XP_001746160.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163775431|gb|EDQ89055.1| predicted protein [Monosiga brevicollis MX1]
Length = 464
Score = 46.6 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 22/61 (36%), Positives = 36/61 (59%), Gaps = 3/61 (4%)
Query: 87 FGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFLERGAV 146
FG +GDG +N+ A A+ +Q GG + +P G +L FN+TS+ L+LE G++
Sbjct: 79 FGAIGDGRHNNSLAMAAALEAVQ---QSGGGTIYIPPGDFLLAPFNMTSHLVLYLEAGSI 135
Query: 147 M 147
+
Sbjct: 136 L 136
>gi|86141409|ref|ZP_01059955.1| hypothetical protein MED217_05307 [Leeuwenhoekiella blandensis
MED217]
gi|85831968|gb|EAQ50423.1| hypothetical protein MED217_05307 [Leeuwenhoekiella blandensis
MED217]
Length = 453
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 33/68 (48%), Gaps = 3/68 (4%)
Query: 84 IKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFLER 143
I DFG + NTEA A+ G + +P+G WLTG + SN L LE
Sbjct: 52 ITDFGADPNNKKKNTEAIAAAIDSAHAIA---GGTVVIPKGEWLTGKIHFKSNVNLHLEE 108
Query: 144 GAVMLGSQ 151
GA +L S+
Sbjct: 109 GATLLFSE 116
>gi|329851964|ref|ZP_08266645.1| tat twin-arginine translocation pathway signal sequence domain
protein [Asticcacaulis biprosthecum C19]
gi|328839813|gb|EGF89386.1| tat twin-arginine translocation pathway signal sequence domain
protein [Asticcacaulis biprosthecum C19]
Length = 510
Score = 46.6 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 23/70 (32%), Positives = 40/70 (57%), Gaps = 3/70 (4%)
Query: 81 AMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLF 140
++++DFG GDGTT +T A A+ ++ +GG L P G + + L S+ L+
Sbjct: 35 GLNVRDFGARGDGTTIDTPAVNAAIDHL---ASRGGGTLYFPAGSYACYTIRLKSHIRLY 91
Query: 141 LERGAVMLGS 150
L+ GAV++ +
Sbjct: 92 LDAGAVIVAA 101
>gi|116619801|ref|YP_821957.1| glycoside hydrolase family protein [Candidatus Solibacter usitatus
Ellin6076]
gi|116222963|gb|ABJ81672.1| glycoside hydrolase, family 28 [Candidatus Solibacter usitatus
Ellin6076]
Length = 528
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 35/65 (53%), Gaps = 3/65 (4%)
Query: 83 SIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFLE 142
+I D+G DG+ TEAFR A+ Q GG + VP G +++G L SN L ++
Sbjct: 25 NIADYGARKDGSALATEAFRSAI---QAAKAAGGGTVYVPAGQYISGPIELVSNLVLHID 81
Query: 143 RGAVM 147
GA +
Sbjct: 82 AGATL 86
>gi|237721218|ref|ZP_04551699.1| glycoside hydrolase family 28 protein [Bacteroides sp. 2_2_4]
gi|229449014|gb|EEO54805.1| glycoside hydrolase family 28 protein [Bacteroides sp. 2_2_4]
Length = 495
Score = 46.6 bits (109), Expect = 0.004, Method: Composition-based stats.
Identities = 30/89 (33%), Positives = 44/89 (49%), Gaps = 3/89 (3%)
Query: 62 PDSCAAGLLGDQYLPERKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNV 121
PD A +G + +P V +S FG V D T +TEA +KA+ G GG +
Sbjct: 27 PDLSWADSVGSRQMPGNHVILSANSFGAVADSTVLSTEAIQKAIDSCAVIG--GGTVVFQ 84
Query: 122 PEGLWLTGSFNLTSNFTLFLERGAVMLGS 150
P G + TG+ + S L L++G +L S
Sbjct: 85 P-GYYQTGALFIKSGVNLQLDKGVTLLAS 112
>gi|375148498|ref|YP_005010939.1| glycoside hydrolase family protein [Niastella koreensis GR20-10]
gi|361062544|gb|AEW01536.1| glycoside hydrolase family 28 [Niastella koreensis GR20-10]
Length = 547
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 46/90 (51%), Gaps = 10/90 (11%)
Query: 64 SCAAGLLGDQYLPE------RKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGA 117
+C++GL Q LP +K + I +G V DG NT+A A+ KGG
Sbjct: 15 ACSSGLSA-QKLPVIQPTSFKKDSTWITKYGAVADGQMLNTQAINAAI---DACNKKGGG 70
Query: 118 QLNVPEGLWLTGSFNLTSNFTLFLERGAVM 147
+ VP GLW TG L SN L L++GAV+
Sbjct: 71 VVVVPAGLWATGPITLKSNVNLHLKKGAVL 100
>gi|374374710|ref|ZP_09632368.1| glycoside hydrolase family 28 [Niabella soli DSM 19437]
gi|373231550|gb|EHP51345.1| glycoside hydrolase family 28 [Niabella soli DSM 19437]
Length = 550
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 44/76 (57%), Gaps = 4/76 (5%)
Query: 76 PERKVAM-SIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLT 134
PE V + ++K FG GDG T +T+A + A+ +KGG P G++++G+ L
Sbjct: 36 PENAVGIYNVKAFGAKGDGKTLDTKAIQTAIDTCNR--NKGGTVF-FPPGIFVSGTLQLK 92
Query: 135 SNFTLFLERGAVMLGS 150
SN TL+L A +LG+
Sbjct: 93 SNVTLYLSAQATLLGT 108
>gi|423295815|ref|ZP_17273942.1| hypothetical protein HMPREF1070_02607 [Bacteroides ovatus
CL03T12C18]
gi|392671543|gb|EIY65015.1| hypothetical protein HMPREF1070_02607 [Bacteroides ovatus
CL03T12C18]
Length = 454
Score = 46.6 bits (109), Expect = 0.004, Method: Composition-based stats.
Identities = 24/65 (36%), Positives = 35/65 (53%), Gaps = 3/65 (4%)
Query: 83 SIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFLE 142
SI ++G V G ++A A+ GG ++ +PEG WLTG +L SN L+L
Sbjct: 47 SIVNYGAVKGGEADVSDAIAGAI---TACNQAGGGRVVIPEGEWLTGPIHLKSNVNLYLA 103
Query: 143 RGAVM 147
GAV+
Sbjct: 104 EGAVL 108
>gi|383112459|ref|ZP_09933252.1| hypothetical protein BSGG_0668 [Bacteroides sp. D2]
gi|313693133|gb|EFS29968.1| hypothetical protein BSGG_0668 [Bacteroides sp. D2]
Length = 454
Score = 46.6 bits (109), Expect = 0.004, Method: Composition-based stats.
Identities = 24/65 (36%), Positives = 35/65 (53%), Gaps = 3/65 (4%)
Query: 83 SIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFLE 142
SI ++G V G ++A A+ GG ++ +PEG WLTG +L SN L+L
Sbjct: 47 SIVNYGAVKGGEADVSDAIAGAI---TACNQAGGGRVVIPEGEWLTGPIHLKSNVNLYLA 103
Query: 143 RGAVM 147
GAV+
Sbjct: 104 EGAVL 108
>gi|336417632|ref|ZP_08597953.1| hypothetical protein HMPREF1017_05061 [Bacteroides ovatus
3_8_47FAA]
gi|335935373|gb|EGM97327.1| hypothetical protein HMPREF1017_05061 [Bacteroides ovatus
3_8_47FAA]
Length = 454
Score = 46.2 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 24/65 (36%), Positives = 35/65 (53%), Gaps = 3/65 (4%)
Query: 83 SIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFLE 142
SI ++G V G ++A A+ GG ++ +PEG WLTG +L SN L+L
Sbjct: 47 SIVNYGAVKGGEADVSDAIAGAI---AACNQAGGGRVVIPEGEWLTGPIHLKSNVNLYLA 103
Query: 143 RGAVM 147
GAV+
Sbjct: 104 EGAVL 108
>gi|354594579|ref|ZP_09012618.1| hypothetical protein CIN_13140 [Commensalibacter intestini A911]
gi|353672255|gb|EHD13955.1| hypothetical protein CIN_13140 [Commensalibacter intestini A911]
Length = 430
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 36/61 (59%), Gaps = 3/61 (4%)
Query: 87 FGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFLERGAV 146
+GG DG T NT+A +KAV +G GG L + +G+WL+G L SN T L +G V
Sbjct: 19 YGGRADGNTINTDAIQKAVDMCAQYG--GGVVL-LSKGVWLSGPITLKSNITFSLGQGTV 75
Query: 147 M 147
+
Sbjct: 76 L 76
>gi|427388349|ref|ZP_18884232.1| hypothetical protein HMPREF9447_05265 [Bacteroides oleiciplenus YIT
12058]
gi|425724932|gb|EKU87806.1| hypothetical protein HMPREF9447_05265 [Bacteroides oleiciplenus YIT
12058]
Length = 475
Score = 46.2 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 27/69 (39%), Positives = 41/69 (59%), Gaps = 4/69 (5%)
Query: 83 SIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFLE 142
+I FG DG T +TEA +KA+ KGG ++ +P G ++TG+ L N TL +E
Sbjct: 23 NITSFGAKADGVTVSTEAIQKAIDESSA---KGG-RVIIPTGDFVTGTLFLKDNTTLVIE 78
Query: 143 RGAVMLGSQ 151
+ A +LGS+
Sbjct: 79 KNARLLGSK 87
>gi|326797927|ref|YP_004315746.1| glycoside hydrolase [Sphingobacterium sp. 21]
gi|326548691|gb|ADZ77076.1| glycoside hydrolase family 28 [Sphingobacterium sp. 21]
Length = 455
Score = 46.2 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 23/70 (32%), Positives = 38/70 (54%), Gaps = 3/70 (4%)
Query: 82 MSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFL 141
+ I D+G + T+ ++A A+ G G + +P G WLTG +L SN L L
Sbjct: 53 LPITDYGALQGNQTATSKAITTAIEKAHKLG---GGIVVIPAGEWLTGKIHLKSNVNLHL 109
Query: 142 ERGAVMLGSQ 151
++GA++L S+
Sbjct: 110 DKGALLLFSE 119
>gi|332665086|ref|YP_004447874.1| glycoside hydrolase [Haliscomenobacter hydrossis DSM 1100]
gi|332333900|gb|AEE51001.1| glycoside hydrolase family 28 [Haliscomenobacter hydrossis DSM
1100]
Length = 532
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 40/74 (54%), Gaps = 3/74 (4%)
Query: 76 PERKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTS 135
P ++ I FG + DG T+N A +KA+ GG ++ +P G +++G+ L +
Sbjct: 23 PPPSKSLKITSFGAIADGITNNVVAIQKAI---DKVSKSGGGKVIIPPGNFMSGTVFLKT 79
Query: 136 NFTLFLERGAVMLG 149
TL LE GA +LG
Sbjct: 80 GVTLHLELGARLLG 93
>gi|399889206|ref|ZP_10775083.1| glycoside hydrolase family protein [Clostridium arbusti SL206]
Length = 756
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 40/69 (57%), Gaps = 5/69 (7%)
Query: 83 SIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFLE 142
++KD+G VGDG T +++A + A+ GG + +P G + T L S+ TL +E
Sbjct: 146 NVKDYGAVGDGVTKDSKAIQDAIDACT----PGGVVV-IPAGTYYTAPLKLKSDMTLNIE 200
Query: 143 RGAVMLGSQ 151
+GA +L S+
Sbjct: 201 KGATILASR 209
>gi|304317802|ref|YP_003852947.1| glycoside hydrolase family protein [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
gi|302779304|gb|ADL69863.1| glycoside hydrolase family 28 [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
Length = 519
Score = 46.2 bits (108), Expect = 0.005, Method: Composition-based stats.
Identities = 25/70 (35%), Positives = 41/70 (58%), Gaps = 5/70 (7%)
Query: 82 MSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFL 141
++++DFG GDG +T + + A+ G ++ PEG++LT L SN TL L
Sbjct: 84 INVRDFGANGDGKRIDTFSIQAAI-----ISCPDGGRVFFPEGIYLTYPLFLKSNITLEL 138
Query: 142 ERGAVMLGSQ 151
+GAV+LG++
Sbjct: 139 GKGAVLLGAK 148
>gi|383752968|ref|YP_005431871.1| putative exo-poly-alpha-D-galacturonosidase [Selenomonas
ruminantium subsp. lactilytica TAM6421]
gi|381365020|dbj|BAL81848.1| putative exo-poly-alpha-D-galacturonosidase [Selenomonas
ruminantium subsp. lactilytica TAM6421]
Length = 570
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 41/70 (58%), Gaps = 5/70 (7%)
Query: 82 MSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFL 141
+ + +G VGDG+T NT+A +KA+ G + VP G + TGS L S+ TL +
Sbjct: 145 LDVTKYGAVGDGSTLNTQAIQKAIDAC-----PAGGTVVVPAGNFKTGSLWLKSDMTLEV 199
Query: 142 ERGAVMLGSQ 151
++ A +LG++
Sbjct: 200 QKDATLLGTE 209
>gi|359414685|ref|ZP_09207150.1| Polygalacturonase [Clostridium sp. DL-VIII]
gi|357173569|gb|EHJ01744.1| Polygalacturonase [Clostridium sp. DL-VIII]
Length = 487
Score = 45.8 bits (107), Expect = 0.005, Method: Composition-based stats.
Identities = 26/70 (37%), Positives = 40/70 (57%), Gaps = 5/70 (7%)
Query: 82 MSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFL 141
+++KDFG GDG +T A + ++ G ++ VP+G +L L SN T+ L
Sbjct: 56 LNVKDFGAKGDGLELDTAAVQASIAACPLHG-----RIIVPKGRYLLTPIFLKSNITIEL 110
Query: 142 ERGAVMLGSQ 151
E GAV+LG+Q
Sbjct: 111 EEGAVLLGAQ 120
>gi|347537471|ref|YP_004844896.1| glycoside hydrolase family protein [Flavobacterium branchiophilum
FL-15]
gi|345530629|emb|CCB70659.1| Glycoside hydrolase precursor, family 28 [Flavobacterium
branchiophilum FL-15]
Length = 475
Score = 45.8 bits (107), Expect = 0.005, Method: Composition-based stats.
Identities = 22/68 (32%), Positives = 37/68 (54%), Gaps = 3/68 (4%)
Query: 83 SIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFLE 142
++ D+G + DG NT F K ++ +KGG + +P+G + TG +L +N L L
Sbjct: 58 NVMDYGAISDGVFDNTVVFNKTIKTCS---EKGGGMVLIPKGTYFTGPIHLDNNVNLHLS 114
Query: 143 RGAVMLGS 150
GA ++ S
Sbjct: 115 EGAEIVFS 122
>gi|325103538|ref|YP_004273192.1| glycoside hydrolase family protein [Pedobacter saltans DSM 12145]
gi|324972386|gb|ADY51370.1| glycoside hydrolase family 28 [Pedobacter saltans DSM 12145]
Length = 632
Score = 45.8 bits (107), Expect = 0.005, Method: Composition-based stats.
Identities = 23/67 (34%), Positives = 37/67 (55%), Gaps = 3/67 (4%)
Query: 84 IKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFLER 143
I FG GD T NT A +KA+ GG + + +G+++TG+ L N TLF++
Sbjct: 181 IVKFGAKGDNQTVNTVAIQKAIDACTA---DGGGSVYIHDGIYVTGTLELKDNVTLFVQA 237
Query: 144 GAVMLGS 150
G+++ S
Sbjct: 238 GSILRAS 244
>gi|300770109|ref|ZP_07079988.1| conserved hypothetical protein [Sphingobacterium spiritivorum ATCC
33861]
gi|300762585|gb|EFK59402.1| conserved hypothetical protein [Sphingobacterium spiritivorum ATCC
33861]
Length = 649
Score = 45.8 bits (107), Expect = 0.005, Method: Composition-based stats.
Identities = 32/109 (29%), Positives = 52/109 (47%), Gaps = 10/109 (9%)
Query: 42 KSVLSPKRVGFSGADGAIFDPDSCAAGLLGDQYLPERKVAMSIKDFGGVGDGTTSNTEAF 101
K +L+ K + + + G + S A G P + I +FG VGD T NT A
Sbjct: 22 KDLLNQKDIDTNLSAGLVNSTQSMANG-------PVDSTSFLITNFGAVGDKVTLNTAAI 74
Query: 102 RKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFLERGAVMLGS 150
++A+ GG + VP G +L+G+ +L + TL ++ G + GS
Sbjct: 75 QRAI---DSCAASGGGLVVVPAGDFLSGTVHLKTGVTLHVQSGGTLWGS 120
>gi|312621451|ref|YP_004023064.1| glycoside hydrolase family 28 [Caldicellulosiruptor kronotskyensis
2002]
gi|312201918|gb|ADQ45245.1| glycoside hydrolase family 28 [Caldicellulosiruptor kronotskyensis
2002]
Length = 446
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 39/69 (56%), Gaps = 3/69 (4%)
Query: 82 MSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFL 141
++I + G DG T A +KA+ +KGG ++ VP G++L+ L SN TL+L
Sbjct: 3 INITELGAKPDGITFCEGAIQKAIDMCH---EKGGGRVVVPAGVYLSRPIELKSNVTLYL 59
Query: 142 ERGAVMLGS 150
E GA++ S
Sbjct: 60 EEGAILKAS 68
>gi|336427665|ref|ZP_08607662.1| hypothetical protein HMPREF0994_03668 [Lachnospiraceae bacterium
3_1_57FAA_CT1]
gi|336009040|gb|EGN39040.1| hypothetical protein HMPREF0994_03668 [Lachnospiraceae bacterium
3_1_57FAA_CT1]
Length = 438
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 40/69 (57%), Gaps = 4/69 (5%)
Query: 83 SIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFLE 142
+I D+G + DG T+N + + A+ K G ++ VP G +L+G+ L SN L+LE
Sbjct: 4 NIMDYGALPDGKTNNQKQIQAAIEDCA----KTGGRVLVPAGNFLSGTIQLKSNVELYLE 59
Query: 143 RGAVMLGSQ 151
+G+V+ S
Sbjct: 60 KGSVLTASN 68
>gi|116625911|ref|YP_828067.1| glycoside hydrolase family protein [Candidatus Solibacter usitatus
Ellin6076]
gi|116229073|gb|ABJ87782.1| glycoside hydrolase, family 28 [Candidatus Solibacter usitatus
Ellin6076]
Length = 553
Score = 45.8 bits (107), Expect = 0.006, Method: Composition-based stats.
Identities = 27/68 (39%), Positives = 40/68 (58%), Gaps = 3/68 (4%)
Query: 83 SIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFLE 142
+I D+G GDGTT +TEA + A+ D+GG L VP G+++ G+ + SN TL +
Sbjct: 45 NILDYGAKGDGTTLDTEALQAAIDACT--ADRGGTVL-VPAGVFVIGTVEMKSNVTLRIA 101
Query: 143 RGAVMLGS 150
+LGS
Sbjct: 102 AQGKLLGS 109
>gi|330996084|ref|ZP_08319977.1| polygalacturonase [Paraprevotella xylaniphila YIT 11841]
gi|329573855|gb|EGG55436.1| polygalacturonase [Paraprevotella xylaniphila YIT 11841]
Length = 466
Score = 45.8 bits (107), Expect = 0.006, Method: Composition-based stats.
Identities = 26/64 (40%), Positives = 34/64 (53%), Gaps = 3/64 (4%)
Query: 84 IKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFLER 143
I +G G NT+A +AV GG ++ VP G WLTG +L SN L LE+
Sbjct: 55 ITRYGAKEGGKVLNTKAIARAVDACH---RAGGGRVVVPAGEWLTGPVHLKSNVNLHLEK 111
Query: 144 GAVM 147
GAV+
Sbjct: 112 GAVL 115
>gi|355672899|ref|ZP_09058620.1| hypothetical protein HMPREF9469_01657 [Clostridium citroniae
WAL-17108]
gi|354814926|gb|EHE99524.1| hypothetical protein HMPREF9469_01657 [Clostridium citroniae
WAL-17108]
Length = 442
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 41/69 (59%), Gaps = 4/69 (5%)
Query: 83 SIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEG-LWLTGSFNLTSNFTLFL 141
+++D+G GDG + + A +KA+ + GG ++ +P G +++GS L SN L++
Sbjct: 4 NVRDYGAAGDGASKDRNAIQKAI---DACSEAGGGRVVLPGGGTYMSGSLVLRSNVELYV 60
Query: 142 ERGAVMLGS 150
E GAV+ S
Sbjct: 61 ESGAVLKAS 69
>gi|325300073|ref|YP_004259990.1| glycoside hydrolase family protein [Bacteroides salanitronis DSM
18170]
gi|324319626|gb|ADY37517.1| glycoside hydrolase family 28 [Bacteroides salanitronis DSM 18170]
Length = 458
Score = 45.8 bits (107), Expect = 0.006, Method: Composition-based stats.
Identities = 26/73 (35%), Positives = 35/73 (47%), Gaps = 5/73 (6%)
Query: 75 LPERKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLT 134
P+R I +G NT A KA+ + GG ++ VP G W TG +L
Sbjct: 45 FPDRDFV--ITKYGASHADKKKNTRALAKAI---EACNRAGGGRVVVPAGEWFTGPVHLK 99
Query: 135 SNFTLFLERGAVM 147
SN L+LE GAV+
Sbjct: 100 SNVNLYLEEGAVL 112
>gi|383114381|ref|ZP_09935145.1| hypothetical protein BSGG_1446 [Bacteroides sp. D2]
gi|313693911|gb|EFS30746.1| hypothetical protein BSGG_1446 [Bacteroides sp. D2]
Length = 460
Score = 45.4 bits (106), Expect = 0.007, Method: Composition-based stats.
Identities = 24/64 (37%), Positives = 32/64 (50%), Gaps = 3/64 (4%)
Query: 84 IKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFLER 143
I D+G G NT+A A+ + GG ++ VP G WLTG + SN L LE
Sbjct: 54 ITDYGAQPGGEADNTKAIAAAI---EACNQAGGGRVVVPAGTWLTGPIHFKSNVNLCLEE 110
Query: 144 GAVM 147
AV+
Sbjct: 111 NAVL 114
>gi|440715734|ref|ZP_20896264.1| glycoside hydrolase family 28 [Rhodopirellula baltica SWK14]
gi|436439283|gb|ELP32750.1| glycoside hydrolase family 28 [Rhodopirellula baltica SWK14]
Length = 497
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 39/68 (57%), Gaps = 3/68 (4%)
Query: 83 SIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFLE 142
++K +G +GDG +T+A ++ + + GG + VP G + G+ L SN TL L+
Sbjct: 52 NVKRYGAIGDGKAMDTKAVQETIDACH---EAGGGVVRVPAGDFQIGTIVLKSNVTLSLD 108
Query: 143 RGAVMLGS 150
GA +LGS
Sbjct: 109 HGASLLGS 116
>gi|346223842|ref|ZP_08844984.1| glycoside hydrolase family protein [Anaerophaga thermohalophila DSM
12881]
Length = 532
Score = 45.4 bits (106), Expect = 0.007, Method: Composition-based stats.
Identities = 27/71 (38%), Positives = 36/71 (50%), Gaps = 6/71 (8%)
Query: 84 IKDFGGV---GDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLF 140
I+DFG D T T+A KA+ + GG + VP G WLTG +L SN L
Sbjct: 68 IRDFGAKEMDADKTNKCTDAIHKAI---DAASESGGGTVLVPAGQWLTGPVHLKSNINLH 124
Query: 141 LERGAVMLGSQ 151
LE+ A + S+
Sbjct: 125 LEKNASLFFSE 135
>gi|393786392|ref|ZP_10374528.1| hypothetical protein HMPREF1068_00808 [Bacteroides nordii
CL02T12C05]
gi|392660021|gb|EIY53638.1| hypothetical protein HMPREF1068_00808 [Bacteroides nordii
CL02T12C05]
Length = 477
Score = 45.4 bits (106), Expect = 0.007, Method: Composition-based stats.
Identities = 24/90 (26%), Positives = 44/90 (48%), Gaps = 3/90 (3%)
Query: 62 PDSCAAGLLGDQYLPERKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNV 121
PD +G + P ++ ++ D+G GD NT A +KA+ + GG +
Sbjct: 30 PDFPWMKEVGAKTFPVQQTVYNVTDYGAKGDALEMNTTAIQKAIDAAE---QAGGGIVTF 86
Query: 122 PEGLWLTGSFNLTSNFTLFLERGAVMLGSQ 151
G++LTG+ + +N + +G ++GSQ
Sbjct: 87 SPGIYLTGALFVGNNVNFNIPKGTTLIGSQ 116
>gi|325106411|ref|YP_004276065.1| glycoside hydrolase family protein [Pedobacter saltans DSM 12145]
gi|324975259|gb|ADY54243.1| glycoside hydrolase family 28 [Pedobacter saltans DSM 12145]
Length = 476
Score = 45.4 bits (106), Expect = 0.007, Method: Composition-based stats.
Identities = 27/82 (32%), Positives = 41/82 (50%), Gaps = 3/82 (3%)
Query: 70 LGDQYLPERKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTG 129
+G + PE K ++ +G GDG T NT +KA+ KGG + G +LTG
Sbjct: 35 VGAKKAPEGKGMFNVAKYGAKGDGKTLNTNTIQKAI---DDCAKKGGGIVVFNPGEYLTG 91
Query: 130 SFNLTSNFTLFLERGAVMLGSQ 151
S + L +++G +LGSQ
Sbjct: 92 SVFVKKGVNLRIDKGVTILGSQ 113
>gi|372221475|ref|ZP_09499896.1| glycoside hydrolase [Mesoflavibacter zeaxanthinifaciens S86]
Length = 507
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 39/68 (57%), Gaps = 2/68 (2%)
Query: 83 SIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFLE 142
++ DFG G +T+A + A+ + K GA + +P+G +L+GS L +N L+LE
Sbjct: 30 NVLDFGADSSGVALSTQAIQNAID--KATKSKDGATVLLPKGTFLSGSIELKNNVELYLE 87
Query: 143 RGAVMLGS 150
G +LGS
Sbjct: 88 EGTTLLGS 95
>gi|336415463|ref|ZP_08595802.1| hypothetical protein HMPREF1017_02910 [Bacteroides ovatus
3_8_47FAA]
gi|335940342|gb|EGN02209.1| hypothetical protein HMPREF1017_02910 [Bacteroides ovatus
3_8_47FAA]
Length = 511
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 43/89 (48%), Gaps = 3/89 (3%)
Query: 62 PDSCAAGLLGDQYLPERKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNV 121
PD A +G + +P V +S FG V D T +TEA +KA+ GG + +
Sbjct: 43 PDLSWADSVGSRQMPGNHVILSANSFGAVADSTVLSTEAIQKAI---DSCAVSGGGTVVL 99
Query: 122 PEGLWLTGSFNLTSNFTLFLERGAVMLGS 150
G + TG+ + S L L++G +L S
Sbjct: 100 QPGYYQTGALFIKSGVNLQLDKGVTLLAS 128
>gi|255691972|ref|ZP_05415647.1| putative exo-poly-alpha-D-galacturonosidase [Bacteroides finegoldii
DSM 17565]
gi|260622381|gb|EEX45252.1| polygalacturonase (pectinase) [Bacteroides finegoldii DSM 17565]
Length = 453
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 35/65 (53%), Gaps = 3/65 (4%)
Query: 83 SIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFLE 142
SI ++G V G ++A A+ GG ++ +PEG WLTG +L SN L+L
Sbjct: 47 SIVNYGAVKGGEADVSDAIAGAI---AACNQAGGGRVVIPEGEWLTGPIHLKSNVNLYLA 103
Query: 143 RGAVM 147
GAV+
Sbjct: 104 EGAVL 108
>gi|219814394|gb|ACL36472.1| pectinase [uncultured bacterium]
Length = 436
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 41/77 (53%), Gaps = 5/77 (6%)
Query: 75 LPERKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLT 134
P+R + + FG G G T A +KA+ GG ++ VPEG++L+G+ L
Sbjct: 19 FPDR--SFDVTAFGADGSGKKDATGAIQKAIDQAH---KAGGGRVAVPEGVFLSGALRLK 73
Query: 135 SNFTLFLERGAVMLGSQ 151
SN L L +GAV+ SQ
Sbjct: 74 SNVELHLAQGAVIKFSQ 90
>gi|282601137|ref|ZP_05980861.2| glycoside hydrolase, family 77 [Subdoligranulum variabile DSM
15176]
gi|282569962|gb|EFB75497.1| polygalacturonase (pectinase) [Subdoligranulum variabile DSM 15176]
Length = 531
Score = 45.1 bits (105), Expect = 0.009, Method: Composition-based stats.
Identities = 25/60 (41%), Positives = 36/60 (60%), Gaps = 5/60 (8%)
Query: 91 GDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFLERGAVMLGS 150
GDG T NT A ++A+ G GD + +P G +LTG+ L S+ L+LE GAV+ G+
Sbjct: 126 GDGITKNTAALQRAIDAC-GPGDA----VYLPAGTYLTGALQLHSDMELYLEEGAVLQGT 180
>gi|359481919|ref|XP_003632692.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g13770, mitochondrial-like [Vitis vinifera]
Length = 1053
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 36/75 (48%), Gaps = 3/75 (4%)
Query: 75 LPERKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLT 134
LP S+ D+G +GDG +T A + + GG Q+ P G +LT + +
Sbjct: 32 LPHLPHLFSVADYGAIGDGLHYDTAAIQATI---DACHSAGGGQIRFPPGTYLTATVYIK 88
Query: 135 SNFTLFLERGAVMLG 149
S L +E GA +LG
Sbjct: 89 SGVYLVVEEGAKILG 103
>gi|255536015|ref|YP_003096386.1| glycoside hydrolase, family 28 [Flavobacteriaceae bacterium
3519-10]
gi|255342211|gb|ACU08324.1| glycoside hydrolase, family 28 [Flavobacteriaceae bacterium
3519-10]
Length = 491
Score = 45.1 bits (105), Expect = 0.009, Method: Composition-based stats.
Identities = 27/73 (36%), Positives = 38/73 (52%), Gaps = 3/73 (4%)
Query: 78 RKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNF 137
R +I +G V DG T TE+ RKA+ GG ++ VP G +L+G +L +N
Sbjct: 65 RDANYNIVSYGAVADGKTMATESIRKAI---LACSKDGGGKVIVPSGKFLSGPIHLENNV 121
Query: 138 TLFLERGAVMLGS 150
L L GA +L S
Sbjct: 122 NLHLMEGAEILFS 134
>gi|358065987|ref|ZP_09152521.1| hypothetical protein HMPREF9473_04584 [Clostridium hathewayi
WAL-18680]
gi|356695850|gb|EHI57475.1| hypothetical protein HMPREF9473_04584 [Clostridium hathewayi
WAL-18680]
Length = 425
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 39/66 (59%), Gaps = 4/66 (6%)
Query: 83 SIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFLE 142
+I ++G VGDG T A +KA+ KGG ++ +P G +L+G L SN L+LE
Sbjct: 4 NILEYGAVGDGKTDCAAAIQKAIDRCSV---KGG-RVVIPAGRFLSGFLQLKSNVELYLE 59
Query: 143 RGAVML 148
GAV++
Sbjct: 60 HGAVLV 65
>gi|349858577|gb|AEQ20322.1| endopygalactorunase [uncultured bacterium CSLG10]
Length = 553
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 37/68 (54%), Gaps = 3/68 (4%)
Query: 84 IKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFLER 143
+K FG GDG + +T + KA+ GG +++ P G +L S +L SN TL+L
Sbjct: 64 VKTFGATGDGKSLDTSSINKAI---DAAASAGGGRVSFPAGSYLCHSIHLQSNITLYLGE 120
Query: 144 GAVMLGSQ 151
GA ++ +
Sbjct: 121 GATLVAAD 128
>gi|375100956|ref|ZP_09747219.1| endopolygalacturonase [Saccharomonospora cyanea NA-134]
gi|374661688|gb|EHR61566.1| endopolygalacturonase [Saccharomonospora cyanea NA-134]
Length = 557
Score = 45.1 bits (105), Expect = 0.009, Method: Composition-based stats.
Identities = 27/70 (38%), Positives = 39/70 (55%), Gaps = 3/70 (4%)
Query: 82 MSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFL 141
+SI DFG G +T AFR A+ + GG ++ +P G +LTG+ +L SN L +
Sbjct: 73 VSITDFGADPTGEHLSTAAFRDAIEEVSA---AGGGRVVIPAGEFLTGAIHLRSNVELHV 129
Query: 142 ERGAVMLGSQ 151
GAV+ SQ
Sbjct: 130 GSGAVVRFSQ 139
>gi|371940174|dbj|BAL45524.1| glycoside hydrolase [Bacillus licheniformis]
Length = 436
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 41/77 (53%), Gaps = 5/77 (6%)
Query: 75 LPERKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLT 134
P+R + + FG G G T A +KA+ GG ++ VPEG++L+G+ L
Sbjct: 19 FPDR--SFDVTAFGADGSGKKDATGAIQKAIDQAH---KAGGGRVAVPEGVFLSGALRLK 73
Query: 135 SNFTLFLERGAVMLGSQ 151
SN L L +GAV+ SQ
Sbjct: 74 SNVELHLAQGAVIKFSQ 90
>gi|430860352|ref|ZP_19477955.1| hypothetical protein OI5_03128 [Enterococcus faecium E1573]
gi|430552280|gb|ELA92015.1| hypothetical protein OI5_03128 [Enterococcus faecium E1573]
Length = 764
Score = 45.1 bits (105), Expect = 0.010, Method: Composition-based stats.
Identities = 27/68 (39%), Positives = 41/68 (60%), Gaps = 6/68 (8%)
Query: 73 QYLPERKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSF- 131
Q L +R V +I+ FG GD +T+NT+A + AV ++ G GG L VP+G++L S
Sbjct: 251 QDLEQRGV--NIEQFGAKGDNSTTNTQAIQSAVDFLNGL---GGGTLVVPDGIFLIDSLI 305
Query: 132 NLTSNFTL 139
N+ SN +
Sbjct: 306 NIPSNIQI 313
>gi|261406869|ref|YP_003243110.1| glycoside hydrolase family protein [Paenibacillus sp. Y412MC10]
gi|261283332|gb|ACX65303.1| glycoside hydrolase family 28 [Paenibacillus sp. Y412MC10]
Length = 475
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 83 SIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFLE 142
+I DFG +GDG + NTEAF A+ +GG + +P GLWLTG L S L +
Sbjct: 30 NIADFGAIGDGLSDNTEAFAAAIEACAS---QGGGTVLIPAGLWLTGPIRLQSGIRLHAD 86
Query: 143 RGAVM 147
GA++
Sbjct: 87 AGALV 91
>gi|374311248|ref|YP_005057678.1| glycoside hydrolase family protein [Granulicella mallensis
MP5ACTX8]
gi|358753258|gb|AEU36648.1| glycoside hydrolase family 28 [Granulicella mallensis MP5ACTX8]
Length = 461
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 37/68 (54%), Gaps = 4/68 (5%)
Query: 84 IKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFLER 143
+ DFG GDGTT ++ A ++A+ G + VP G +L GS + S TL +E+
Sbjct: 37 VSDFGAKGDGTTLDSPAIQRAI----DAASHSGGTVIVPAGTYLCGSIFVKSGVTLQIEK 92
Query: 144 GAVMLGSQ 151
A + GSQ
Sbjct: 93 DATIRGSQ 100
>gi|319953995|ref|YP_004165262.1| glycoside hydrolase family protein [Cellulophaga algicola DSM
14237]
gi|319422655|gb|ADV49764.1| glycoside hydrolase family 28 [Cellulophaga algicola DSM 14237]
Length = 459
Score = 44.7 bits (104), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 39/67 (58%), Gaps = 3/67 (4%)
Query: 84 IKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFLER 143
IK+FG GD T NT+A +KA+ GG + + EG++ +G+ L N TL +++
Sbjct: 34 IKNFGAKGDSITINTKAIQKAI---DKCSKNGGGIVVIKEGVYSSGTILLKDNVTLQIDK 90
Query: 144 GAVMLGS 150
A +LGS
Sbjct: 91 SAKLLGS 97
>gi|312794448|ref|YP_004027371.1| glycoside hydrolase family 28 [Caldicellulosiruptor kristjanssonii
177R1B]
gi|312181588|gb|ADQ41758.1| glycoside hydrolase family 28 [Caldicellulosiruptor kristjanssonii
177R1B]
Length = 446
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 37/69 (53%), Gaps = 3/69 (4%)
Query: 82 MSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFL 141
+ I G DG T A +KA+ +KGG ++ VP G++L+ L SN TL+L
Sbjct: 3 IDITQLGAKPDGITFCEGAIQKAIDMCH---EKGGGKVIVPAGVYLSRPIELKSNVTLYL 59
Query: 142 ERGAVMLGS 150
E GA++ S
Sbjct: 60 EEGAILKAS 68
>gi|423226672|ref|ZP_17213137.1| hypothetical protein HMPREF1062_05323 [Bacteroides cellulosilyticus
CL02T12C19]
gi|392628199|gb|EIY22233.1| hypothetical protein HMPREF1062_05323 [Bacteroides cellulosilyticus
CL02T12C19]
Length = 486
Score = 44.7 bits (104), Expect = 0.012, Method: Composition-based stats.
Identities = 25/64 (39%), Positives = 35/64 (54%), Gaps = 3/64 (4%)
Query: 87 FGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFLERGAV 146
FG DG T NT + + + Y+ +GG L G +LTGS L SN + L+ GAV
Sbjct: 27 FGIKSDGVTLNTNSIQTGINYIH---KEGGGVLVFNVGRYLTGSIELKSNVAIQLKEGAV 83
Query: 147 MLGS 150
++GS
Sbjct: 84 LVGS 87
>gi|224537416|ref|ZP_03677955.1| hypothetical protein BACCELL_02294 [Bacteroides cellulosilyticus
DSM 14838]
gi|224520942|gb|EEF90047.1| hypothetical protein BACCELL_02294 [Bacteroides cellulosilyticus
DSM 14838]
Length = 486
Score = 44.7 bits (104), Expect = 0.012, Method: Composition-based stats.
Identities = 25/64 (39%), Positives = 35/64 (54%), Gaps = 3/64 (4%)
Query: 87 FGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFLERGAV 146
FG DG T NT + + + Y+ +GG L G +LTGS L SN + L+ GAV
Sbjct: 27 FGIKSDGVTLNTNSIQTGINYIH---KEGGGVLVFNVGRYLTGSIELKSNVAIQLKEGAV 83
Query: 147 MLGS 150
++GS
Sbjct: 84 LVGS 87
>gi|375149153|ref|YP_005011594.1| glycoside hydrolase family protein [Niastella koreensis GR20-10]
gi|361063199|gb|AEW02191.1| glycoside hydrolase family 28 [Niastella koreensis GR20-10]
Length = 558
Score = 44.7 bits (104), Expect = 0.012, Method: Composition-based stats.
Identities = 26/76 (34%), Positives = 41/76 (53%), Gaps = 4/76 (5%)
Query: 75 LPERKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLT 134
LP ++ +++DFG GDG T NT+A + A+ + G + +P G ++ G+ L
Sbjct: 45 LPGARI-FNVRDFGAKGDGKTLNTKAIQAAI---DACNKENGGTVLIPAGDFICGTVELK 100
Query: 135 SNFTLFLERGAVMLGS 150
SN TL L +LGS
Sbjct: 101 SNVTLHLSAQGRLLGS 116
>gi|160886934|ref|ZP_02067937.1| hypothetical protein BACOVA_04948 [Bacteroides ovatus ATCC 8483]
gi|423294892|ref|ZP_17273019.1| parallel beta-helix [Bacteroides ovatus CL03T12C18]
gi|156107345|gb|EDO09090.1| polygalacturonase (pectinase) [Bacteroides ovatus ATCC 8483]
gi|392676083|gb|EIY69524.1| parallel beta-helix [Bacteroides ovatus CL03T12C18]
Length = 511
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 44/89 (49%), Gaps = 3/89 (3%)
Query: 62 PDSCAAGLLGDQYLPERKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNV 121
PD A +G + +P V +S FG V D T +TEA +KA+ G GG +
Sbjct: 43 PDLSWADSVGSRQMPGNHVILSANSFGAVADSTVLSTEAIQKAIDSCAVIG--GGTVVLQ 100
Query: 122 PEGLWLTGSFNLTSNFTLFLERGAVMLGS 150
P G + TG+ + S L L++G +L S
Sbjct: 101 P-GYYQTGALFIKSGVNLQLDKGVTLLAS 128
>gi|320107426|ref|YP_004183016.1| hypothetical protein AciPR4_2220 [Terriglobus saanensis SP1PR4]
gi|319925947|gb|ADV83022.1| hypothetical protein AciPR4_2220 [Terriglobus saanensis SP1PR4]
Length = 545
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 43/82 (52%), Gaps = 6/82 (7%)
Query: 73 QYLPE-RKVA--MSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTG 129
Q LP+ R VA ++ +G +GDG T +T A +A+ G G + P G++L+
Sbjct: 31 QSLPQDRSVAGVFDVRAYGAIGDGKTVDTPAINRAIEAASAVG---GGTVAFPAGVYLSF 87
Query: 130 SFNLTSNFTLFLERGAVMLGSQ 151
S L S+ L L GAV+L +
Sbjct: 88 SIRLRSHIQLQLHAGAVILAAD 109
>gi|291459617|ref|ZP_06599007.1| polygalacturonase [Oribacterium sp. oral taxon 078 str. F0262]
gi|291417895|gb|EFE91614.1| polygalacturonase [Oribacterium sp. oral taxon 078 str. F0262]
Length = 526
Score = 44.7 bits (104), Expect = 0.012, Method: Composition-based stats.
Identities = 35/119 (29%), Positives = 57/119 (47%), Gaps = 16/119 (13%)
Query: 31 LITIFSLEITKKSVLSPKRVGFSGADGAIFDPDSCAAGLLGDQYLPERKVAMSIKDFGGV 90
+I+IF LE + R+ A+G +P L + PE V + ++ FG +
Sbjct: 44 VISIFGLEPDTEY-----RIAIILAEGGGEEPK-----WLSFRTAPE-SVLLDVRAFGAL 92
Query: 91 GDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFLERGAVMLG 149
GDG +T + A+ G + +P+G +LT L S +L+L+RGAV+LG
Sbjct: 93 GDGKNDDTACIQAAIEACPKDG-----TVRIPKGRYLTRPLFLRSGLSLWLDRGAVLLG 146
>gi|254295109|ref|YP_003061132.1| polygalacturonase [Hirschia baltica ATCC 49814]
gi|254043640|gb|ACT60435.1| polygalacturonase [Hirschia baltica ATCC 49814]
Length = 530
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 38/66 (57%), Gaps = 3/66 (4%)
Query: 82 MSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFL 141
++I+DFG GDG+T ++ A +A+ + GG + P G + + L SN TL+L
Sbjct: 40 VNIRDFGTKGDGSTIDSHAINRAIDHAASM---GGGMVFFPAGTYSCFTIRLKSNITLYL 96
Query: 142 ERGAVM 147
+ GA++
Sbjct: 97 DNGAII 102
>gi|326800288|ref|YP_004318107.1| glycoside hydrolase [Sphingobacterium sp. 21]
gi|326551052|gb|ADZ79437.1| glycoside hydrolase family 28 [Sphingobacterium sp. 21]
Length = 543
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 36/70 (51%), Gaps = 3/70 (4%)
Query: 78 RKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNF 137
+K +SI FG + G NTE+ +A+ KGG + +P G+WL+G L SN
Sbjct: 33 KKDTVSITAFGAISGGRHLNTESINQAIDQTH---KKGGGVVLIPAGVWLSGPITLKSNI 89
Query: 138 TLFLERGAVM 147
L L A++
Sbjct: 90 NLHLAANALL 99
>gi|293370061|ref|ZP_06616627.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CMC 3f]
gi|299148453|ref|ZP_07041515.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. 3_1_23]
gi|423288960|ref|ZP_17267811.1| parallel beta-helix [Bacteroides ovatus CL02T12C04]
gi|292634853|gb|EFF53376.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CMC 3f]
gi|298513214|gb|EFI37101.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. 3_1_23]
gi|392668724|gb|EIY62218.1| parallel beta-helix [Bacteroides ovatus CL02T12C04]
Length = 511
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 44/89 (49%), Gaps = 3/89 (3%)
Query: 62 PDSCAAGLLGDQYLPERKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNV 121
PD A +G + +P V +S FG V D T +TEA +KA+ G GG +
Sbjct: 43 PDLSWADSVGSRQMPGNHVILSANSFGAVADSTVLSTEAIQKAIDSCAVIG--GGTVVFQ 100
Query: 122 PEGLWLTGSFNLTSNFTLFLERGAVMLGS 150
P G + TG+ + S L L++G +L S
Sbjct: 101 P-GYYQTGALFIKSGVNLQLDKGVTLLAS 128
>gi|383114377|ref|ZP_09935141.1| parallel beta-helix [Bacteroides sp. D2]
gi|313693916|gb|EFS30751.1| parallel beta-helix [Bacteroides sp. D2]
Length = 511
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 44/89 (49%), Gaps = 3/89 (3%)
Query: 62 PDSCAAGLLGDQYLPERKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNV 121
PD A +G + +P V +S FG V D T +TEA +KA+ G GG +
Sbjct: 43 PDLSWADSVGSRQMPGNHVILSANSFGAVADSTVLSTEAIQKAIDSCAVIG--GGTVVLQ 100
Query: 122 PEGLWLTGSFNLTSNFTLFLERGAVMLGS 150
P G + TG+ + S L L++G +L S
Sbjct: 101 P-GYYQTGALFIKSGVNLQLDKGVTLLAS 128
>gi|336404047|ref|ZP_08584748.1| hypothetical protein HMPREF0127_02061 [Bacteroides sp. 1_1_30]
gi|295086699|emb|CBK68222.1| Endopolygalacturonase [Bacteroides xylanisolvens XB1A]
gi|335943763|gb|EGN05595.1| hypothetical protein HMPREF0127_02061 [Bacteroides sp. 1_1_30]
Length = 511
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 43/89 (48%), Gaps = 3/89 (3%)
Query: 62 PDSCAAGLLGDQYLPERKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNV 121
PD A +G + +P + +S FG V D T +TEA +KA+ GG + +
Sbjct: 43 PDLSWADSVGSRQMPGNNLILSANSFGAVADSTVLSTEAIQKAI---DSCSVSGGGTVTL 99
Query: 122 PEGLWLTGSFNLTSNFTLFLERGAVMLGS 150
G + TG+ + S L L++G +L S
Sbjct: 100 QPGYYQTGALFVKSGVNLQLDKGVTLLAS 128
>gi|295103112|emb|CBL00656.1| Endopolygalacturonase [Faecalibacterium prausnitzii SL3/3]
Length = 518
Score = 44.7 bits (104), Expect = 0.014, Method: Composition-based stats.
Identities = 27/63 (42%), Positives = 36/63 (57%), Gaps = 5/63 (7%)
Query: 87 FGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFLERGAV 146
+G V DG T NT + A+ KGG + VP G + T S + SN TL+LE+GAV
Sbjct: 87 YGLVADGETDNTVRLQAALSTCP----KGGT-VYVPAGRYRTASLFMKSNTTLYLEKGAV 141
Query: 147 MLG 149
+LG
Sbjct: 142 LLG 144
>gi|345512457|ref|ZP_08791983.1| glycoside hydrolase family 28 protein [Bacteroides dorei 5_1_36/D4]
gi|229438032|gb|EEO48109.1| glycoside hydrolase family 28 protein [Bacteroides dorei 5_1_36/D4]
Length = 475
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 39/68 (57%), Gaps = 3/68 (4%)
Query: 83 SIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFLE 142
++KD+G DGTT +T A +A+ + +GG + P G + S L S+ L++E
Sbjct: 22 NVKDYGAKADGTTIDTPAINRAI---EEAASQGGGTIYFPAGEYACYSIRLASHIHLYIE 78
Query: 143 RGAVMLGS 150
+GA ++G+
Sbjct: 79 QGAQIVGA 86
>gi|160945608|ref|ZP_02092834.1| hypothetical protein FAEPRAM212_03137 [Faecalibacterium prausnitzii
M21/2]
gi|158443339|gb|EDP20344.1| polygalacturonase (pectinase) [Faecalibacterium prausnitzii M21/2]
Length = 518
Score = 44.7 bits (104), Expect = 0.014, Method: Composition-based stats.
Identities = 27/63 (42%), Positives = 36/63 (57%), Gaps = 5/63 (7%)
Query: 87 FGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFLERGAV 146
+G V DG T NT + A+ KGG + VP G + T S + SN TL+LE+GAV
Sbjct: 87 YGLVADGETDNTVRLQAALSTCP----KGGT-VYVPAGRYRTASLFMKSNTTLYLEKGAV 141
Query: 147 MLG 149
+LG
Sbjct: 142 LLG 144
>gi|265752319|ref|ZP_06088112.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_33FAA]
gi|423228993|ref|ZP_17215398.1| hypothetical protein HMPREF1063_01218 [Bacteroides dorei
CL02T00C15]
gi|423239834|ref|ZP_17220949.1| hypothetical protein HMPREF1065_01572 [Bacteroides dorei
CL03T12C01]
gi|423244832|ref|ZP_17225906.1| hypothetical protein HMPREF1064_02112 [Bacteroides dorei
CL02T12C06]
gi|263237111|gb|EEZ22581.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_33FAA]
gi|392634746|gb|EIY28658.1| hypothetical protein HMPREF1063_01218 [Bacteroides dorei
CL02T00C15]
gi|392641219|gb|EIY35003.1| hypothetical protein HMPREF1064_02112 [Bacteroides dorei
CL02T12C06]
gi|392645459|gb|EIY39186.1| hypothetical protein HMPREF1065_01572 [Bacteroides dorei
CL03T12C01]
Length = 475
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 39/68 (57%), Gaps = 3/68 (4%)
Query: 83 SIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFLE 142
++KD+G DGTT +T A +A+ + +GG + P G + S L S+ L++E
Sbjct: 22 NVKDYGAKADGTTIDTPAINRAI---EEAASQGGGTIYFPAGEYACYSIRLASHIHLYIE 78
Query: 143 RGAVMLGS 150
+GA ++G+
Sbjct: 79 QGAQIVGA 86
>gi|212690875|ref|ZP_03299003.1| hypothetical protein BACDOR_00363 [Bacteroides dorei DSM 17855]
gi|237712637|ref|ZP_04543118.1| glycoside hydrolase family 28 protein [Bacteroides sp. 9_1_42FAA]
gi|212666557|gb|EEB27129.1| hypothetical protein BACDOR_00363 [Bacteroides dorei DSM 17855]
gi|229453958|gb|EEO59679.1| glycoside hydrolase family 28 protein [Bacteroides sp. 9_1_42FAA]
Length = 475
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 39/68 (57%), Gaps = 3/68 (4%)
Query: 83 SIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFLE 142
++KD+G DGTT +T A +A+ + +GG + P G + S L S+ L++E
Sbjct: 22 NVKDYGAKADGTTIDTPAINRAI---EEAASQGGGTIYFPAGEYACYSIRLASHIHLYIE 78
Query: 143 RGAVMLGS 150
+GA ++G+
Sbjct: 79 QGAQIVGA 86
>gi|319643140|ref|ZP_07997770.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_40A]
gi|345520568|ref|ZP_08799955.1| glycoside hydrolase family 28 [Bacteroides sp. 4_3_47FAA]
gi|254835088|gb|EET15397.1| glycoside hydrolase family 28 [Bacteroides sp. 4_3_47FAA]
gi|317385218|gb|EFV66167.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_40A]
Length = 474
Score = 44.3 bits (103), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 39/68 (57%), Gaps = 3/68 (4%)
Query: 83 SIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFLE 142
++KD+G DGTT +T A +A+ + +GG + P G + S L S+ L++E
Sbjct: 22 NVKDYGAKADGTTIDTPAINRAI---EEAASQGGGTIYFPAGEYACYSIRLASHIHLYIE 78
Query: 143 RGAVMLGS 150
+GA ++G+
Sbjct: 79 QGARIVGA 86
>gi|298482095|ref|ZP_07000283.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. D22]
gi|298271652|gb|EFI13225.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. D22]
Length = 511
Score = 44.3 bits (103), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 43/89 (48%), Gaps = 3/89 (3%)
Query: 62 PDSCAAGLLGDQYLPERKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNV 121
PD A +G + +P + +S FG V D T +TEA +KA+ GG + +
Sbjct: 43 PDLSWADSVGSRQMPGNSLILSANSFGAVADSTVLSTEAIQKAI---DSCSVSGGGTVTL 99
Query: 122 PEGLWLTGSFNLTSNFTLFLERGAVMLGS 150
G + TG+ + S L L++G +L S
Sbjct: 100 QPGYYQTGALFVKSGVNLQLDKGVTLLAS 128
>gi|393785428|ref|ZP_10373579.1| hypothetical protein HMPREF1071_04447 [Bacteroides salyersiae
CL02T12C01]
gi|392662401|gb|EIY55961.1| hypothetical protein HMPREF1071_04447 [Bacteroides salyersiae
CL02T12C01]
Length = 468
Score = 44.3 bits (103), Expect = 0.016, Method: Composition-based stats.
Identities = 27/76 (35%), Positives = 36/76 (47%), Gaps = 3/76 (3%)
Query: 75 LPERKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLT 134
LP + I G GDG T NT +KA+ + G + +P G +LT + L
Sbjct: 16 LPTFAYTVDITTLGAKGDGITDNTAFIQKAIDDCSA---RKGGTVEIPSGHFLTRTLFLK 72
Query: 135 SNFTLFLERGAVMLGS 150
SN L L GA +LGS
Sbjct: 73 SNVNLHLHFGAELLGS 88
>gi|293375683|ref|ZP_06621956.1| polygalacturonase (pectinase) [Turicibacter sanguinis PC909]
gi|292645734|gb|EFF63771.1| polygalacturonase (pectinase) [Turicibacter sanguinis PC909]
Length = 526
Score = 44.3 bits (103), Expect = 0.016, Method: Composition-based stats.
Identities = 26/77 (33%), Positives = 42/77 (54%), Gaps = 5/77 (6%)
Query: 74 YLPERKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNL 133
Y + + +++K F GDG T +T A + A+ D G ++ +P+G + T + L
Sbjct: 76 YTKKESICLNVKHFNAKGDGITDDTLAIQAAI---MSCPDDG--RVFIPKGTYATKTIFL 130
Query: 134 TSNFTLFLERGAVMLGS 150
SN TL LE+GA +L S
Sbjct: 131 KSNLTLELEKGATLLYS 147
>gi|262408402|ref|ZP_06084949.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
gi|294647547|ref|ZP_06725126.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CC 2a]
gi|294807593|ref|ZP_06766388.1| polygalacturonase (pectinase) [Bacteroides xylanisolvens SD CC 1b]
gi|345508616|ref|ZP_08788242.1| glycoside hydrolase family 28 [Bacteroides sp. D1]
gi|262353954|gb|EEZ03047.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
gi|292637115|gb|EFF55554.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CC 2a]
gi|294445208|gb|EFG13880.1| polygalacturonase (pectinase) [Bacteroides xylanisolvens SD CC 1b]
gi|345455044|gb|EEO51505.2| glycoside hydrolase family 28 [Bacteroides sp. D1]
Length = 511
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 43/89 (48%), Gaps = 3/89 (3%)
Query: 62 PDSCAAGLLGDQYLPERKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNV 121
PD A +G + +P + +S FG V D T +TEA +KA+ GG + +
Sbjct: 43 PDLSWADSVGSRQMPGNSLILSANSFGAVADSTVLSTEAIQKAI---DSCSVSGGGTVTL 99
Query: 122 PEGLWLTGSFNLTSNFTLFLERGAVMLGS 150
G + TG+ + S L L++G +L S
Sbjct: 100 QPGYYQTGALFVKSGVNLQLDKGVTLLAS 128
>gi|116619804|ref|YP_821960.1| glycoside hydrolase family protein [Candidatus Solibacter usitatus
Ellin6076]
gi|116222966|gb|ABJ81675.1| glycoside hydrolase, family 28 [Candidatus Solibacter usitatus
Ellin6076]
Length = 535
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 35/63 (55%), Gaps = 3/63 (4%)
Query: 83 SIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFLE 142
+I D+G DG+ T+AFR+A+ Q GG + VP G + +G L SN TL ++
Sbjct: 32 NIADYGAKKDGSAPATDAFRQAI---QAAKAAGGGTIYVPPGRYTSGPIELFSNMTLDID 88
Query: 143 RGA 145
GA
Sbjct: 89 AGA 91
>gi|427385173|ref|ZP_18881678.1| hypothetical protein HMPREF9447_02711 [Bacteroides oleiciplenus YIT
12058]
gi|425727341|gb|EKU90201.1| hypothetical protein HMPREF9447_02711 [Bacteroides oleiciplenus YIT
12058]
Length = 486
Score = 44.3 bits (103), Expect = 0.017, Method: Composition-based stats.
Identities = 25/64 (39%), Positives = 35/64 (54%), Gaps = 3/64 (4%)
Query: 87 FGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFLERGAV 146
FG DG T NT + + + Y+ +GG L G +LTGS L SN + L+ GAV
Sbjct: 27 FGIKSDGVTLNTNSIQTGIDYIH---KEGGGVLVFNVGRYLTGSIELKSNVAIQLKEGAV 83
Query: 147 MLGS 150
++GS
Sbjct: 84 LVGS 87
>gi|255691107|ref|ZP_05414782.1| exo-poly-alpha-D-galacturonosidase [Bacteroides finegoldii DSM
17565]
gi|260623460|gb|EEX46331.1| polygalacturonase (pectinase) [Bacteroides finegoldii DSM 17565]
Length = 505
Score = 44.3 bits (103), Expect = 0.018, Method: Composition-based stats.
Identities = 26/89 (29%), Positives = 41/89 (46%), Gaps = 3/89 (3%)
Query: 62 PDSCAAGLLGDQYLPERKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNV 121
PD A +G + P +A+S G V D T +T A +KA+ GG + +
Sbjct: 38 PDLSWADSVGSRQEPINHIALSANSLGAVADSTVLSTTAIQKAI---DSCAVSGGGTVTL 94
Query: 122 PEGLWLTGSFNLTSNFTLFLERGAVMLGS 150
G + TG+ + S L L++G +L S
Sbjct: 95 QPGYYQTGALFIKSGVNLHLDKGVTLLAS 123
>gi|116626800|ref|YP_828956.1| glycoside hydrolase family protein [Candidatus Solibacter usitatus
Ellin6076]
gi|116229962|gb|ABJ88671.1| glycoside hydrolase, family 28 [Candidatus Solibacter usitatus
Ellin6076]
Length = 462
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 35/64 (54%), Gaps = 3/64 (4%)
Query: 84 IKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFLER 143
I FG DG T T+A RKA+ G G ++ EG +LTG+ +L SN L +E+
Sbjct: 53 ITRFGARADGKTDCTDAIRKAIDEAARVG---GGRVMAREGAFLTGAIHLKSNVNLVVEK 109
Query: 144 GAVM 147
GA +
Sbjct: 110 GATL 113
>gi|329851295|ref|ZP_08266052.1| glycoside hydrolase family protein [Asticcacaulis biprosthecum C19]
gi|328840141|gb|EGF89713.1| glycoside hydrolase family protein [Asticcacaulis biprosthecum C19]
Length = 511
Score = 44.3 bits (103), Expect = 0.018, Method: Composition-based stats.
Identities = 24/65 (36%), Positives = 36/65 (55%), Gaps = 3/65 (4%)
Query: 83 SIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFLE 142
+++DFG GDG T +T+A R AV+ GG + +P G +L+ S L TL+L
Sbjct: 27 NVRDFGARGDGVTLDTDAIRSAVKAAHA---AGGGTVLLPAGHYLSFSVRLFDKVTLWLG 83
Query: 143 RGAVM 147
G V+
Sbjct: 84 EGCVL 88
>gi|294777278|ref|ZP_06742733.1| conserved hypothetical protein [Bacteroides vulgatus PC510]
gi|294448898|gb|EFG17443.1| conserved hypothetical protein [Bacteroides vulgatus PC510]
Length = 474
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 39/68 (57%), Gaps = 3/68 (4%)
Query: 83 SIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFLE 142
++KD+G DGTT +T A +A+ + +GG + P G + S L S+ L++E
Sbjct: 22 NVKDYGAKADGTTIDTPAINRAI---EEAASQGGGTVYFPAGEYACYSIRLASHIHLYIE 78
Query: 143 RGAVMLGS 150
+GA ++G+
Sbjct: 79 QGARIVGA 86
>gi|329961304|ref|ZP_08299450.1| polygalacturonase [Bacteroides fluxus YIT 12057]
gi|328531910|gb|EGF58730.1| polygalacturonase [Bacteroides fluxus YIT 12057]
Length = 490
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 35/69 (50%), Gaps = 3/69 (4%)
Query: 82 MSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFL 141
+ I G GDG T NT +KAV KGG + VP G++L L SN L L
Sbjct: 28 IDITKRGAKGDGVTDNTVVIQKAV---DECSRKGGGTVLVPSGVYLIRPVELKSNVNLHL 84
Query: 142 ERGAVMLGS 150
+ GA++L S
Sbjct: 85 DFGALLLAS 93
>gi|333382504|ref|ZP_08474174.1| hypothetical protein HMPREF9455_02340 [Dysgonomonas gadei ATCC
BAA-286]
gi|332828815|gb|EGK01507.1| hypothetical protein HMPREF9455_02340 [Dysgonomonas gadei ATCC
BAA-286]
Length = 717
Score = 43.9 bits (102), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 39/80 (48%), Gaps = 3/80 (3%)
Query: 71 GDQYLPERKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGS 130
G + +P+ + ++ D+G V DG T NT+A +KA+ GG + G +LTGS
Sbjct: 35 GARNIPKSNRSYNVADYGAVADGVTMNTKAIQKAI---DECARNGGGTVTFSPGKYLTGS 91
Query: 131 FNLTSNFTLFLERGAVMLGS 150
L + + +LGS
Sbjct: 92 VYLKEGVHFIIPKHTTLLGS 111
>gi|440286926|ref|YP_007339691.1| endopolygalacturonase [Enterobacteriaceae bacterium strain FGI 57]
gi|440046448|gb|AGB77506.1| endopolygalacturonase [Enterobacteriaceae bacterium strain FGI 57]
Length = 445
Score = 43.9 bits (102), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 36/69 (52%), Gaps = 3/69 (4%)
Query: 82 MSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFL 141
+S++ G GT T ++ + + GG L +P G+WLTG+ L S+FTL L
Sbjct: 3 LSLEQAGLDNTGTRPVTAQLQQMIDTLAA---AGGGTLTIPPGVWLTGTLVLPSHFTLHL 59
Query: 142 ERGAVMLGS 150
E GA + S
Sbjct: 60 EAGACLRAS 68
>gi|332533447|ref|ZP_08409312.1| glycoside hydrolase, family 77 [Pseudoalteromonas haloplanktis
ANT/505]
gi|332037156|gb|EGI73613.1| glycoside hydrolase, family 77 [Pseudoalteromonas haloplanktis
ANT/505]
Length = 474
Score = 43.9 bits (102), Expect = 0.021, Method: Composition-based stats.
Identities = 22/65 (33%), Positives = 35/65 (53%), Gaps = 3/65 (4%)
Query: 83 SIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFLE 142
+IKDFG +G T+A A+ +GG Q+ +P+G + TG+ +L SN L L
Sbjct: 48 NIKDFGAKENGQYDCTQAINSAIEACHA---QGGGQVYIPDGTYFTGAIHLLSNVNLHLS 104
Query: 143 RGAVM 147
A++
Sbjct: 105 DNAIV 109
>gi|389815882|ref|ZP_10207130.1| hypothetical protein A1A1_03677 [Planococcus antarcticus DSM 14505]
gi|388465605|gb|EIM07921.1| hypothetical protein A1A1_03677 [Planococcus antarcticus DSM 14505]
Length = 517
Score = 43.9 bits (102), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 35/59 (59%), Gaps = 9/59 (15%)
Query: 77 ERKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTS 135
ER+V +I D+G VGDG T TEAF+KA FG KG ++ VP G++L L S
Sbjct: 105 ERRV--NISDYGAVGDGETDCTEAFKKA------FG-KGSVEVKVPAGVYLVDGLKLPS 154
>gi|317047820|ref|YP_004115468.1| glycoside hydrolase family protein [Pantoea sp. At-9b]
gi|316949437|gb|ADU68912.1| glycoside hydrolase family 28 [Pantoea sp. At-9b]
Length = 447
Score = 43.9 bits (102), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 42/85 (49%), Gaps = 5/85 (5%)
Query: 64 SCAAGLLGDQYLPERKVAMSIKDFGGVGDGTTSNTEAFRKAV-RYMQGFGDKGGAQLNVP 122
+CAA + + S DFGG GD +T T A ++A+ R Q +GG + +
Sbjct: 9 ACAAVSVTPLFAVAAPFHCSPADFGGKGDDSTLATRAIQQAIDRCAQ----QGGGHVTLG 64
Query: 123 EGLWLTGSFNLTSNFTLFLERGAVM 147
G+WL+G L SN TL + G +
Sbjct: 65 PGVWLSGPIVLKSNVTLVIPDGVTL 89
>gi|357450135|ref|XP_003595344.1| Polygalacturonase-like protein [Medicago truncatula]
gi|355484392|gb|AES65595.1| Polygalacturonase-like protein [Medicago truncatula]
Length = 297
Score = 43.9 bits (102), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 19/26 (73%), Positives = 21/26 (80%)
Query: 113 DKGGAQLNVPEGLWLTGSFNLTSNFT 138
D GGAQLNVP GLWLT FNLTS+ +
Sbjct: 146 DGGGAQLNVPPGLWLTAPFNLTSHMS 171
>gi|325285350|ref|YP_004261140.1| glycoside hydrolase family protein [Cellulophaga lytica DSM 7489]
gi|324320804|gb|ADY28269.1| glycoside hydrolase family 28 [Cellulophaga lytica DSM 7489]
Length = 460
Score = 43.9 bits (102), Expect = 0.022, Method: Composition-based stats.
Identities = 24/69 (34%), Positives = 40/69 (57%), Gaps = 4/69 (5%)
Query: 83 SIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEG-LWLTGSFNLTSNFTLFL 141
+I D+G +G T +T+A +K + +GG ++ +P G L G+ L N TL+L
Sbjct: 22 NIMDYGAKANGKTLDTKAVQKTIDLCS---KQGGGKVVIPAGKTVLIGTIYLKDNVTLYL 78
Query: 142 ERGAVMLGS 150
E G+++LGS
Sbjct: 79 ENGSILLGS 87
>gi|431797010|ref|YP_007223914.1| endopolygalacturonase [Echinicola vietnamensis DSM 17526]
gi|430787775|gb|AGA77904.1| endopolygalacturonase [Echinicola vietnamensis DSM 17526]
Length = 455
Score = 43.9 bits (102), Expect = 0.022, Method: Composition-based stats.
Identities = 23/68 (33%), Positives = 35/68 (51%), Gaps = 3/68 (4%)
Query: 84 IKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFLER 143
I DFG D + ++A A+ + GG ++ +P G W TG +L SN + LE
Sbjct: 54 ITDFGAEEDDQQATSQAIVTAI---SAAVEAGGGRIVIPAGEWPTGKIHLKSNINIHLEE 110
Query: 144 GAVMLGSQ 151
GA +L S+
Sbjct: 111 GATLLFSE 118
>gi|256424483|ref|YP_003125136.1| G-D-S-L family lipolytic protein [Chitinophaga pinensis DSM 2588]
gi|256039391|gb|ACU62935.1| lipolytic protein G-D-S-L family [Chitinophaga pinensis DSM 2588]
Length = 727
Score = 43.9 bits (102), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 39/79 (49%), Gaps = 4/79 (5%)
Query: 70 LGDQYLPE-RKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLT 128
L + Y P R+ +SI G DG T N++ A+ + GG + +P GLWLT
Sbjct: 256 LPEIYEPHFRRDTLSIVALGAKADGVTLNSKIINAAITKAS---ENGGGVVMIPAGLWLT 312
Query: 129 GSFNLTSNFTLFLERGAVM 147
G + SN L+L A++
Sbjct: 313 GPIVMKSNVNLYLAPNALL 331
>gi|317056840|ref|YP_004105307.1| glycoside hydrolase family protein [Ruminococcus albus 7]
gi|315449109|gb|ADU22673.1| glycoside hydrolase family 28 [Ruminococcus albus 7]
Length = 513
Score = 43.9 bits (102), Expect = 0.023, Method: Composition-based stats.
Identities = 24/69 (34%), Positives = 39/69 (56%), Gaps = 5/69 (7%)
Query: 81 AMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLF 140
A+S++DFG GDG + +T + + A+ + G +L PEG++LT L S+ TL
Sbjct: 76 AVSVRDFGAKGDGFSDDTVSIQTAINCLPNNG-----RLYFPEGVYLTAPIVLKSHITLD 130
Query: 141 LERGAVMLG 149
+ A +LG
Sbjct: 131 ISEKAKLLG 139
>gi|373851794|ref|ZP_09594594.1| glycoside hydrolase family 28 [Opitutaceae bacterium TAV5]
gi|372474023|gb|EHP34033.1| glycoside hydrolase family 28 [Opitutaceae bacterium TAV5]
Length = 466
Score = 43.9 bits (102), Expect = 0.023, Method: Composition-based stats.
Identities = 23/68 (33%), Positives = 36/68 (52%), Gaps = 3/68 (4%)
Query: 82 MSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFL 141
+SI + G + + NT A ++A+ D GG + P G +LTG+ L +N TL+L
Sbjct: 3 ISITETGAIASPSAINTRAIQQAIDRC---ADAGGGVVYFPPGTFLTGTLWLKTNITLYL 59
Query: 142 ERGAVMLG 149
E G +L
Sbjct: 60 EAGCTLLA 67
>gi|308185704|ref|YP_003929835.1| polygalacturonase [Pantoea vagans C9-1]
gi|308056214|gb|ADO08386.1| Putative polygalacturonase precursor [Pantoea vagans C9-1]
Length = 352
Score = 43.9 bits (102), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 40/70 (57%), Gaps = 5/70 (7%)
Query: 82 MSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFL 141
++I DF V D T+ +T+A ++A+ G + +P G +LTG+ L S TL L
Sbjct: 4 INIIDFAAVPDATSLSTQAIQRAIDSA-----SAGDTVLIPAGRFLTGALFLKSEMTLEL 58
Query: 142 ERGAVMLGSQ 151
+ AV+LGSQ
Sbjct: 59 AKDAVLLGSQ 68
>gi|388545356|ref|ZP_10148639.1| exo-poly-alpha-D-galacturonosidase [Pseudomonas sp. M47T1]
gi|388276676|gb|EIK96255.1| exo-poly-alpha-D-galacturonosidase [Pseudomonas sp. M47T1]
Length = 608
Score = 43.5 bits (101), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 42/68 (61%), Gaps = 5/68 (7%)
Query: 84 IKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFLER 143
++ +G +GDG +T A ++A+ +GG L +P+G++ +G+ L SN TL + +
Sbjct: 158 VRRYGAIGDGEHLDTAAIQRAIDACT----RGGKVL-LPKGVYKSGALYLKSNMTLEIAK 212
Query: 144 GAVMLGSQ 151
GA +LGS+
Sbjct: 213 GATLLGSE 220
>gi|372223095|ref|ZP_09501516.1| glycoside hydrolase family protein [Mesoflavibacter
zeaxanthinifaciens S86]
Length = 472
Score = 43.5 bits (101), Expect = 0.027, Method: Composition-based stats.
Identities = 22/66 (33%), Positives = 37/66 (56%), Gaps = 3/66 (4%)
Query: 83 SIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFLE 142
++ D+G V DG+ NTEA +A++ GG ++ +P G ++TG +L N L +
Sbjct: 56 NVMDYGAVADGSVLNTEAIAEAIKACNA---AGGGKVVLPAGKYVTGPIHLLDNVNLEIA 112
Query: 143 RGAVML 148
GA +L
Sbjct: 113 EGAEVL 118
>gi|294674947|ref|YP_003575563.1| polygalacturonase/beta-xylosidase [Prevotella ruminicola 23]
gi|294474354|gb|ADE83743.1| putative polygalacturonase/beta-xylosidase [Prevotella ruminicola
23]
Length = 936
Score = 43.5 bits (101), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 38/69 (55%), Gaps = 3/69 (4%)
Query: 82 MSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFL 141
+IK +G D T +T A ++A+ GG ++ VP G++ G+ L S+ L+L
Sbjct: 21 FNIKSYGAQNDTTVLSTHALQQAIDACSA---AGGGRVVVPAGIYKIGTIQLKSHVHLYL 77
Query: 142 ERGAVMLGS 150
E+GA + GS
Sbjct: 78 EQGATLYGS 86
>gi|427407417|ref|ZP_18897619.1| hypothetical protein HMPREF9718_00093 [Sphingobium yanoikuyae ATCC
51230]
gi|425714220|gb|EKU77229.1| hypothetical protein HMPREF9718_00093 [Sphingobium yanoikuyae ATCC
51230]
Length = 529
Score = 43.5 bits (101), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 38/69 (55%), Gaps = 3/69 (4%)
Query: 82 MSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFL 141
+ ++ FG GDGT ++ A KA+ ++ G GG + P G + + + + S TLFL
Sbjct: 43 VDVRQFGAKGDGTAIDSGAINKAIDHVAGL---GGGTVYFPAGSYASYTIRMKSRVTLFL 99
Query: 142 ERGAVMLGS 150
GAV+L +
Sbjct: 100 ADGAVLLAA 108
>gi|189465208|ref|ZP_03013993.1| hypothetical protein BACINT_01553 [Bacteroides intestinalis DSM
17393]
gi|189437482|gb|EDV06467.1| polygalacturonase (pectinase) [Bacteroides intestinalis DSM 17393]
Length = 457
Score = 43.5 bits (101), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 35/60 (58%), Gaps = 3/60 (5%)
Query: 92 DGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFLERGAVMLGSQ 151
DG T T +KA+ +GG +++P G +LTG+ L N TL LE+GA +LGS+
Sbjct: 23 DGKTLTTTGLQKAI---DDCARQGGGVVSLPAGKYLTGTLVLKKNVTLNLEKGATILGSK 79
>gi|225874241|ref|YP_002755700.1| polygalacturonase [Acidobacterium capsulatum ATCC 51196]
gi|225791499|gb|ACO31589.1| polygalacturonase [Acidobacterium capsulatum ATCC 51196]
Length = 428
Score = 43.5 bits (101), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 35/64 (54%), Gaps = 3/64 (4%)
Query: 87 FGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFLERGAV 146
+G GDG + +T A + A+ +GG + + G +L+ L SN TL LE+GA
Sbjct: 38 YGAKGDGVSKDTAAIQHAI---DACAKRGGGTVLLTPGTYLSAPIVLKSNITLKLEKGAT 94
Query: 147 MLGS 150
+LGS
Sbjct: 95 LLGS 98
>gi|344995464|ref|YP_004797807.1| glycoside hydrolase family protein [Caldicellulosiruptor
lactoaceticus 6A]
gi|343963683|gb|AEM72830.1| glycoside hydrolase family 28 [Caldicellulosiruptor lactoaceticus
6A]
Length = 446
Score = 43.5 bits (101), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 36/69 (52%), Gaps = 3/69 (4%)
Query: 82 MSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFL 141
+ I G DG T A +KA+ +KGG ++ VP G++L+ L SN TL+L
Sbjct: 3 IDITQLGAKPDGITFCEGAIQKAIDMCH---EKGGGKVIVPAGVYLSRPIELKSNVTLYL 59
Query: 142 ERGAVMLGS 150
E GA + S
Sbjct: 60 EEGATLKAS 68
>gi|408369676|ref|ZP_11167456.1| glycoside hydrolase family protein [Galbibacter sp. ck-I2-15]
gi|407744730|gb|EKF56297.1| glycoside hydrolase family protein [Galbibacter sp. ck-I2-15]
Length = 441
Score = 43.5 bits (101), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 39/76 (51%), Gaps = 3/76 (3%)
Query: 75 LPERKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLT 134
L E I D G V D T T+A + + KGG + +P+G++LTGS
Sbjct: 47 LSELGKVYKITDHGVVSDSTQVQTKALQAVIDLT---ASKGGGVVVIPKGVFLTGSLFFR 103
Query: 135 SNFTLFLERGAVMLGS 150
+ L+LE+GAV+ GS
Sbjct: 104 QSTHLYLEKGAVLKGS 119
>gi|239628084|ref|ZP_04671115.1| glycoside hydrolase family protein [Clostridiales bacterium
1_7_47_FAA]
gi|239518230|gb|EEQ58096.1| glycoside hydrolase family protein [Clostridiales bacterium
1_7_47FAA]
Length = 515
Score = 43.5 bits (101), Expect = 0.032, Method: Composition-based stats.
Identities = 28/79 (35%), Positives = 40/79 (50%), Gaps = 4/79 (5%)
Query: 73 QYLPERKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFN 132
Q+ PE+ V I+DFG V NTEAF+ A + GG + V EG +L G+
Sbjct: 44 QHTPEKPV-FDIRDFGAVAQEGRLNTEAFQAAADACR---RAGGGTILVREGTFLMGTVY 99
Query: 133 LTSNFTLFLERGAVMLGSQ 151
L N TL + GA + ++
Sbjct: 100 LYDNTTLHIAPGAAIAATR 118
>gi|333380567|ref|ZP_08472258.1| hypothetical protein HMPREF9455_00424 [Dysgonomonas gadei ATCC
BAA-286]
gi|332826562|gb|EGJ99391.1| hypothetical protein HMPREF9455_00424 [Dysgonomonas gadei ATCC
BAA-286]
Length = 504
Score = 43.1 bits (100), Expect = 0.034, Method: Composition-based stats.
Identities = 22/65 (33%), Positives = 34/65 (52%), Gaps = 3/65 (4%)
Query: 83 SIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFLE 142
+I D+G DG T T ++A+ +GG ++VP G +L G+ NL SN E
Sbjct: 24 NIIDYGAKNDGVTLTTAQIQEAINECH---KEGGGIVHVPSGTYLVGTINLKSNVEFNFE 80
Query: 143 RGAVM 147
GA++
Sbjct: 81 TGAIL 85
>gi|409198539|ref|ZP_11227202.1| glycoside hydrolase [Marinilabilia salmonicolor JCM 21150]
Length = 531
Score = 43.1 bits (100), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 61/141 (43%), Gaps = 13/141 (9%)
Query: 14 KGNFSRPSWATIVLIVTLITIFSLEITKKSVLSPKRVGFSGADGAIFDPDSC-AAGLLGD 72
K N R I+LI +++ S IT S + FS A I D+ +
Sbjct: 4 KNNMLRQKNKKILLIALVLSFISCGIT-----SGQNHKFSEAPRNIAPVDAPFEMPVFER 58
Query: 73 QYLPERKVAMSIKDFGGV--GDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGS 130
P++ I+DFG + +T+A +A+ GG ++ +P G WLTG
Sbjct: 59 PVFPDQ--TFDIRDFGARQKNNNNHKSTDAIHRAI---DAATTAGGGKVLIPRGNWLTGP 113
Query: 131 FNLTSNFTLFLERGAVMLGSQ 151
+L SN L LE GA + S+
Sbjct: 114 IHLKSNINLHLEEGASLYFSE 134
>gi|333380566|ref|ZP_08472257.1| hypothetical protein HMPREF9455_00423 [Dysgonomonas gadei ATCC
BAA-286]
gi|332826561|gb|EGJ99390.1| hypothetical protein HMPREF9455_00423 [Dysgonomonas gadei ATCC
BAA-286]
Length = 505
Score = 43.1 bits (100), Expect = 0.036, Method: Composition-based stats.
Identities = 23/68 (33%), Positives = 37/68 (54%), Gaps = 3/68 (4%)
Query: 83 SIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFLE 142
++KDFG + DG T T +KA+ +GG + VP+G +L G+ NL S+ E
Sbjct: 24 NVKDFGALNDGKTLTTIYIQKAIDQCSY---EGGGVVYVPKGNYLVGTINLKSDVEFRFE 80
Query: 143 RGAVMLGS 150
GA ++ +
Sbjct: 81 TGATLVAT 88
>gi|427388103|ref|ZP_18883986.1| hypothetical protein HMPREF9447_05019 [Bacteroides oleiciplenus YIT
12058]
gi|425724686|gb|EKU87560.1| hypothetical protein HMPREF9447_05019 [Bacteroides oleiciplenus YIT
12058]
Length = 473
Score = 43.1 bits (100), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 35/60 (58%), Gaps = 3/60 (5%)
Query: 92 DGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFLERGAVMLGSQ 151
DG T T +KA+ +GG +++P G +LTG+ L N TL LE+GA +LGS+
Sbjct: 39 DGKTLTTAGLQKAI---DDCARQGGGVVSLPAGKYLTGTLVLKRNVTLNLEKGATILGSK 95
>gi|423315474|ref|ZP_17293402.1| hypothetical protein HMPREF1058_04014 [Bacteroides vulgatus
CL09T03C04]
gi|392679277|gb|EIY72663.1| hypothetical protein HMPREF1058_04014 [Bacteroides vulgatus
CL09T03C04]
Length = 474
Score = 43.1 bits (100), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 39/68 (57%), Gaps = 3/68 (4%)
Query: 83 SIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFLE 142
++KD+G DGTT ++ A +A+ + +GG + P G + S L S+ L++E
Sbjct: 22 NVKDYGAKADGTTIDSPAINRAI---EEAASQGGGTIYFPAGEYACYSIRLASHIHLYIE 78
Query: 143 RGAVMLGS 150
+GA ++G+
Sbjct: 79 QGARIVGA 86
>gi|383120486|ref|ZP_09941214.1| hypothetical protein BSIG_2504 [Bacteroides sp. 1_1_6]
gi|251840461|gb|EES68543.1| hypothetical protein BSIG_2504 [Bacteroides sp. 1_1_6]
Length = 467
Score = 43.1 bits (100), Expect = 0.038, Method: Composition-based stats.
Identities = 21/68 (30%), Positives = 38/68 (55%), Gaps = 3/68 (4%)
Query: 83 SIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFLE 142
+++DFG DG T ++ A +A+ + +GG + +P G + S L SN L+LE
Sbjct: 23 NVRDFGAKADGKTIDSPAINRAI---EAAAQEGGGTVYLPAGEYACYSIRLKSNIHLYLE 79
Query: 143 RGAVMLGS 150
+GA ++ +
Sbjct: 80 QGARIIAA 87
>gi|29349554|ref|NP_813057.1| exo-poly-alpha-D-galacturonosidase [Bacteroides thetaiotaomicron
VPI-5482]
gi|29341464|gb|AAO79251.1| exo-poly-alpha-D-galacturonosidase precursor [Bacteroides
thetaiotaomicron VPI-5482]
Length = 467
Score = 43.1 bits (100), Expect = 0.038, Method: Composition-based stats.
Identities = 21/68 (30%), Positives = 38/68 (55%), Gaps = 3/68 (4%)
Query: 83 SIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFLE 142
+++DFG DG T ++ A +A+ + +GG + +P G + S L SN L+LE
Sbjct: 23 NVRDFGAKADGKTIDSPAINRAI---EAAAQEGGGTVYLPAGEYACYSIRLKSNIHLYLE 79
Query: 143 RGAVMLGS 150
+GA ++ +
Sbjct: 80 QGARIIAA 87
>gi|423214932|ref|ZP_17201460.1| hypothetical protein HMPREF1074_02992 [Bacteroides xylanisolvens
CL03T12C04]
gi|392692195|gb|EIY85433.1| hypothetical protein HMPREF1074_02992 [Bacteroides xylanisolvens
CL03T12C04]
Length = 472
Score = 43.1 bits (100), Expect = 0.038, Method: Composition-based stats.
Identities = 33/119 (27%), Positives = 54/119 (45%), Gaps = 14/119 (11%)
Query: 30 TLITIFSLEITKKSVLSPKRVGFSGADGAIFDPDSCAAGLLGDQYLPERKVAMSIKDFGG 89
+ + +F L +T + L+ K + AD + + L P++ +I DFG
Sbjct: 15 SFLIVFILIVTNTANLAAKSSPWDIADKIVAE--------LNPVTFPDK--TYNIADFGA 64
Query: 90 VGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEG-LWLTGSFNLTSNFTLFLERGAVM 147
V DG AF KA+ D+GG ++ VP G ++ G SN + LE GA++
Sbjct: 65 VADGRMPCKGAFDKAITQCS---DQGGGRIIVPAGTYYMNGPLVFKSNVNIHLEDGAIL 120
>gi|322434842|ref|YP_004217054.1| glycoside hydrolase family protein [Granulicella tundricola
MP5ACTX9]
gi|321162569|gb|ADW68274.1| glycoside hydrolase family 28 [Granulicella tundricola MP5ACTX9]
Length = 478
Score = 43.1 bits (100), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 39/70 (55%), Gaps = 4/70 (5%)
Query: 82 MSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFL 141
+ + DFG GDG+T +T A +KA+ G + P G +L+GS + S TL L
Sbjct: 27 VKVNDFGAKGDGSTMDTAAIQKAI---DAAAKSHGTVVFAP-GTYLSGSIFVKSGVTLQL 82
Query: 142 ERGAVMLGSQ 151
++G +LGSQ
Sbjct: 83 DKGVTILGSQ 92
>gi|189467886|ref|ZP_03016671.1| hypothetical protein BACINT_04278 [Bacteroides intestinalis DSM
17393]
gi|189436150|gb|EDV05135.1| hypothetical protein BACINT_04278 [Bacteroides intestinalis DSM
17393]
Length = 457
Score = 43.1 bits (100), Expect = 0.041, Method: Composition-based stats.
Identities = 21/68 (30%), Positives = 39/68 (57%), Gaps = 3/68 (4%)
Query: 83 SIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFLE 142
++KD+G DG T ++ A +A+ G +GG + +P G ++ S L S+ L+LE
Sbjct: 7 NVKDYGARADGVTIDSPAINRAISAAAG---EGGGTVYIPAGEYVCYSIRLASHVHLYLE 63
Query: 143 RGAVMLGS 150
+GA ++ +
Sbjct: 64 QGARIIAA 71
>gi|391230412|ref|ZP_10266618.1| endopolygalacturonase [Opitutaceae bacterium TAV1]
gi|391220073|gb|EIP98493.1| endopolygalacturonase [Opitutaceae bacterium TAV1]
Length = 481
Score = 43.1 bits (100), Expect = 0.041, Method: Composition-based stats.
Identities = 23/68 (33%), Positives = 36/68 (52%), Gaps = 3/68 (4%)
Query: 82 MSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFL 141
+SI + G + + NT A ++A+ D GG + P G +LTG+ L +N TL+L
Sbjct: 18 ISITETGAIASPSAINTRAIQQAIDRC---ADAGGGVVYFPPGTFLTGTLWLKTNTTLYL 74
Query: 142 ERGAVMLG 149
E G +L
Sbjct: 75 EAGCTLLA 82
>gi|319953998|ref|YP_004165265.1| glycoside hydrolase family protein [Cellulophaga algicola DSM
14237]
gi|319422658|gb|ADV49767.1| glycoside hydrolase family 28 [Cellulophaga algicola DSM 14237]
Length = 463
Score = 43.1 bits (100), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 40/69 (57%), Gaps = 4/69 (5%)
Query: 83 SIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEG-LWLTGSFNLTSNFTLFL 141
++ D+G GDGT+ +T+A + A+ GG + +P G L G+ L + TL++
Sbjct: 22 NVLDYGAKGDGTSKDTKAVQAAI---DACTKNGGGNVIIPAGKTVLIGTIYLKNFVTLYI 78
Query: 142 ERGAVMLGS 150
E GAV+LGS
Sbjct: 79 ENGAVLLGS 87
>gi|125973158|ref|YP_001037068.1| dockerin type I cellulosome protein [Clostridium thermocellum ATCC
27405]
gi|256003955|ref|ZP_05428941.1| cellulosome protein dockerin type I [Clostridium thermocellum DSM
2360]
gi|281417352|ref|ZP_06248372.1| Dockerin type 1 [Clostridium thermocellum JW20]
gi|385778934|ref|YP_005688099.1| Dockerin type 1 [Clostridium thermocellum DSM 1313]
gi|419723050|ref|ZP_14250185.1| Dockerin type 1 protein [Clostridium thermocellum AD2]
gi|419725046|ref|ZP_14252101.1| Dockerin type 1 protein [Clostridium thermocellum YS]
gi|125713383|gb|ABN51875.1| Dockerin type 1 [Clostridium thermocellum ATCC 27405]
gi|255992083|gb|EEU02179.1| cellulosome protein dockerin type I [Clostridium thermocellum DSM
2360]
gi|281408754|gb|EFB39012.1| Dockerin type 1 [Clostridium thermocellum JW20]
gi|316940614|gb|ADU74648.1| Dockerin type 1 [Clostridium thermocellum DSM 1313]
gi|380771666|gb|EIC05531.1| Dockerin type 1 protein [Clostridium thermocellum YS]
gi|380780817|gb|EIC10480.1| Dockerin type 1 protein [Clostridium thermocellum AD2]
Length = 582
Score = 42.7 bits (99), Expect = 0.046, Method: Composition-based stats.
Identities = 23/56 (41%), Positives = 34/56 (60%), Gaps = 5/56 (8%)
Query: 75 LPERKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGS 130
+P + V ++KDFG GDG T ++ AF+KAV ++ GGA L +P G +L S
Sbjct: 44 IPTKPVVANVKDFGAKGDGLTDDSNAFKKAVESVK----DGGAVL-IPSGEYLIKS 94
>gi|380693873|ref|ZP_09858732.1| exo-poly-alpha-D-galacturonosidase [Bacteroides faecis MAJ27]
Length = 473
Score = 42.7 bits (99), Expect = 0.046, Method: Composition-based stats.
Identities = 21/68 (30%), Positives = 37/68 (54%), Gaps = 3/68 (4%)
Query: 83 SIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFLE 142
+++DFG DG T ++ A +A+ + GG + +P G + S L SN L+LE
Sbjct: 29 NVRDFGAKADGKTIDSPAINRAI---EAAAQDGGGTIYLPAGEYACYSIRLKSNIHLYLE 85
Query: 143 RGAVMLGS 150
+GA ++ +
Sbjct: 86 QGARIIAA 93
>gi|150002792|ref|YP_001297536.1| glycoside hydrolase [Bacteroides vulgatus ATCC 8482]
gi|149931216|gb|ABR37914.1| glycoside hydrolase family 28 [Bacteroides vulgatus ATCC 8482]
Length = 474
Score = 42.7 bits (99), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 39/68 (57%), Gaps = 3/68 (4%)
Query: 83 SIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFLE 142
++KD+G DGTT ++ A +A+ + +GG + P G + S L S+ L++E
Sbjct: 22 NVKDYGAKADGTTIDSPAINRAI---EEAASQGGGTVYFPAGEYACYSIRLASHIHLYIE 78
Query: 143 RGAVMLGS 150
+GA ++G+
Sbjct: 79 QGARIVGA 86
>gi|196231702|ref|ZP_03130559.1| glycoside hydrolase family 28 [Chthoniobacter flavus Ellin428]
gi|196224174|gb|EDY18687.1| glycoside hydrolase family 28 [Chthoniobacter flavus Ellin428]
Length = 510
Score = 42.7 bits (99), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 38/66 (57%), Gaps = 4/66 (6%)
Query: 85 KDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFLERG 144
+ +G VGDG T +T A ++A+ K G + + G +L+G+ L S TL +++G
Sbjct: 28 RQYGAVGDGKTKDTAALQRAIDAAA----KVGGTVRLATGTYLSGTVILKSGVTLQIDKG 83
Query: 145 AVMLGS 150
A +LGS
Sbjct: 84 ATLLGS 89
>gi|383120489|ref|ZP_09941217.1| parallel beta-helix [Bacteroides sp. 1_1_6]
gi|251840459|gb|EES68541.1| parallel beta-helix [Bacteroides sp. 1_1_6]
Length = 506
Score = 42.7 bits (99), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 43/89 (48%), Gaps = 3/89 (3%)
Query: 62 PDSCAAGLLGDQYLPERKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNV 121
PD A +G + LP K+ +S FG V D T +TEA +KA+ GG + +
Sbjct: 38 PDLSWADSVGSRQLPGDKMIISANSFGAVADSTVLSTEAIQKAI---DSCAISGGGTVVL 94
Query: 122 PEGLWLTGSFNLTSNFTLFLERGAVMLGS 150
G + TG+ + S L + +G +L S
Sbjct: 95 QPGYYQTGALFVKSGVNLQIGKGVTLLAS 123
>gi|342213860|ref|ZP_08706579.1| fibronectin type III domain protein [Veillonella sp. oral taxon 780
str. F0422]
gi|341597448|gb|EGS40007.1| fibronectin type III domain protein [Veillonella sp. oral taxon 780
str. F0422]
Length = 482
Score = 42.7 bits (99), Expect = 0.052, Method: Composition-based stats.
Identities = 24/63 (38%), Positives = 36/63 (57%), Gaps = 5/63 (7%)
Query: 87 FGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFLERGAV 146
+G VGDG T NT A +KA+R G L++ +G++ TG+ L S TL L+ AV
Sbjct: 148 YGAVGDGITDNTLALQKAIR-----DTPAGGILHLSKGVYRTGTLFLHSYMTLELDEDAV 202
Query: 147 MLG 149
++
Sbjct: 203 LMA 205
>gi|317474354|ref|ZP_07933628.1| hypothetical protein HMPREF1016_00607 [Bacteroides eggerthii
1_2_48FAA]
gi|316909035|gb|EFV30715.1| hypothetical protein HMPREF1016_00607 [Bacteroides eggerthii
1_2_48FAA]
Length = 503
Score = 42.7 bits (99), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 38/69 (55%), Gaps = 4/69 (5%)
Query: 82 MSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFL 141
++IKD+ G T TE ++A+ K G L P+G++ TG N+ SN +LFL
Sbjct: 147 VNIKDYDIDSTGNTLCTEKIQQAIDETA----KKGGVLYFPKGIYRTGQLNMRSNLSLFL 202
Query: 142 ERGAVMLGS 150
A+++GS
Sbjct: 203 ADDALLMGS 211
>gi|304396605|ref|ZP_07378486.1| glycoside hydrolase family 28 [Pantoea sp. aB]
gi|304356114|gb|EFM20480.1| glycoside hydrolase family 28 [Pantoea sp. aB]
Length = 430
Score = 42.7 bits (99), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 40/70 (57%), Gaps = 5/70 (7%)
Query: 82 MSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFL 141
++I DF V D T+ +T+A ++A+ G + +P G +LTG+ L S TL L
Sbjct: 4 INIIDFAAVPDATSLSTQAIQRAIDSA-----SAGDTVLIPAGRFLTGALFLKSEMTLEL 58
Query: 142 ERGAVMLGSQ 151
+ A++LGSQ
Sbjct: 59 AKDAMLLGSQ 68
>gi|59044763|gb|AAW84064.1| pectate lyase [uncultured bacterium]
Length = 466
Score = 42.7 bits (99), Expect = 0.055, Method: Composition-based stats.
Identities = 26/68 (38%), Positives = 35/68 (51%), Gaps = 3/68 (4%)
Query: 84 IKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFLER 143
I+ FG DG T +T A A+ + GG + +P G +LTG L S+ L LE
Sbjct: 10 IRTFGAQPDGETPSTAAITAAI---ETCAAAGGGVVYIPAGRFLTGPLRLKSHVRLHLEA 66
Query: 144 GAVMLGSQ 151
GA +L SQ
Sbjct: 67 GAHLLFSQ 74
>gi|298383805|ref|ZP_06993366.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. 1_1_14]
gi|298263409|gb|EFI06272.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. 1_1_14]
Length = 506
Score = 42.7 bits (99), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 43/89 (48%), Gaps = 3/89 (3%)
Query: 62 PDSCAAGLLGDQYLPERKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNV 121
PD A +G + LP K+ +S FG V D T +TEA +KA+ GG + +
Sbjct: 38 PDLSWADSVGSRQLPGDKMIISANSFGAVADSTVLSTEAIQKAI---DSCAVSGGGTVVL 94
Query: 122 PEGLWLTGSFNLTSNFTLFLERGAVMLGS 150
G + TG+ + S L + +G +L S
Sbjct: 95 QPGYYQTGALFVKSGVNLQIGKGVTLLAS 123
>gi|440760701|ref|ZP_20939804.1| Polygalacturonase [Pantoea agglomerans 299R]
gi|436425454|gb|ELP23188.1| Polygalacturonase [Pantoea agglomerans 299R]
Length = 430
Score = 42.4 bits (98), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 40/70 (57%), Gaps = 5/70 (7%)
Query: 82 MSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFL 141
++I DF V D T+ +T+A ++A+ G + +P G +LTG+ L S TL L
Sbjct: 4 INIIDFAAVPDATSLSTQAIQRAIDSA-----SAGDTVLIPAGRFLTGALFLKSEMTLEL 58
Query: 142 ERGAVMLGSQ 151
+ A++LGSQ
Sbjct: 59 AKDAMLLGSQ 68
>gi|61393763|gb|AAX45476.1| polygalacturonase [Lilium longiflorum]
gi|73913442|gb|AAZ91659.1| polygalacturonase [Lilium longiflorum]
Length = 413
Score = 42.4 bits (98), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 37/56 (66%), Gaps = 6/56 (10%)
Query: 75 LPERKVAMSIKDFGGVGDGTTSNTEAFRKA-VRYMQGFGDKGGAQLNVPEGLWLTG 129
+PE KV ++K FG VGDG T +T+A +A + GFG + ++ VPEG++LTG
Sbjct: 26 VPETKV--NVKSFGAVGDGKTDSTQAILRAWDQACNGFGKQ---RVIVPEGVYLTG 76
>gi|224536494|ref|ZP_03677033.1| hypothetical protein BACCELL_01369 [Bacteroides cellulosilyticus
DSM 14838]
gi|423223623|ref|ZP_17210092.1| hypothetical protein HMPREF1062_02278 [Bacteroides cellulosilyticus
CL02T12C19]
gi|224521896|gb|EEF91001.1| hypothetical protein BACCELL_01369 [Bacteroides cellulosilyticus
DSM 14838]
gi|392638248|gb|EIY32095.1| hypothetical protein HMPREF1062_02278 [Bacteroides cellulosilyticus
CL02T12C19]
Length = 486
Score = 42.4 bits (98), Expect = 0.056, Method: Composition-based stats.
Identities = 25/73 (34%), Positives = 37/73 (50%), Gaps = 3/73 (4%)
Query: 79 KVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFT 138
K +I D+G + D T +T A +KA+ GG + VP G +LT S L SN
Sbjct: 22 KAVYNIMDYGAIADTTILSTNAIQKAI---DECAKNGGGVVWVPSGNYLTTSVVLRSNVN 78
Query: 139 LFLERGAVMLGSQ 151
L L+ G+ + S+
Sbjct: 79 LHLDAGSALYASR 91
>gi|366165794|ref|ZP_09465549.1| dockerin type I cellulosome protein [Acetivibrio cellulolyticus
CD2]
Length = 577
Score = 42.4 bits (98), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 34/53 (64%), Gaps = 5/53 (9%)
Query: 75 LPERKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWL 127
+P++ +++++KDFG GDG T + EAF +A++ + G + +PEG +L
Sbjct: 45 IPQKSISVNVKDFGAKGDGVTDDYEAFNEAIKSV-----TAGEAVFIPEGNYL 92
>gi|224540434|ref|ZP_03680973.1| hypothetical protein BACCELL_05347 [Bacteroides cellulosilyticus
DSM 14838]
gi|224517948|gb|EEF87053.1| hypothetical protein BACCELL_05347 [Bacteroides cellulosilyticus
DSM 14838]
Length = 457
Score = 42.4 bits (98), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 38/68 (55%), Gaps = 3/68 (4%)
Query: 83 SIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFLE 142
++K +G G+G ++ A +KA+ GG + VP G +L+ + L N TL LE
Sbjct: 26 NVKKYGARGNGKKMDSPAIQKAIDACH---KAGGGTVLVPAGTYLSATIVLKDNVTLHLE 82
Query: 143 RGAVMLGS 150
+ A++LG+
Sbjct: 83 KDALILGT 90
>gi|380693875|ref|ZP_09858734.1| exo-poly-alpha-D-galacturonosidase [Bacteroides faecis MAJ27]
Length = 506
Score = 42.4 bits (98), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 43/89 (48%), Gaps = 3/89 (3%)
Query: 62 PDSCAAGLLGDQYLPERKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNV 121
PD A +G + LP K+ +S FG V D T +TEA +KA+ GG + +
Sbjct: 38 PDLSWADSVGSRQLPGDKMIISANSFGAVADSTVLSTEAIQKAI---DSCAVSGGGTVIL 94
Query: 122 PEGLWLTGSFNLTSNFTLFLERGAVMLGS 150
G + TG+ + S L + +G +L S
Sbjct: 95 QPGYYQTGALFVKSGVNLQIGKGVTLLAS 123
>gi|423224357|ref|ZP_17210825.1| hypothetical protein HMPREF1062_03011 [Bacteroides cellulosilyticus
CL02T12C19]
gi|392636018|gb|EIY29903.1| hypothetical protein HMPREF1062_03011 [Bacteroides cellulosilyticus
CL02T12C19]
Length = 457
Score = 42.4 bits (98), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 38/68 (55%), Gaps = 3/68 (4%)
Query: 83 SIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFLE 142
++K +G G+G ++ A +KA+ GG + VP G +L+ + L N TL LE
Sbjct: 26 NVKKYGARGNGKKMDSPAIQKAIDACH---KAGGGTVLVPAGTYLSATIVLKDNVTLHLE 82
Query: 143 RGAVMLGS 150
+ A++LG+
Sbjct: 83 KDALILGT 90
>gi|29349557|ref|NP_813060.1| exo-poly-alpha-D-galacturonosidase, partial [Bacteroides
thetaiotaomicron VPI-5482]
gi|29341467|gb|AAO79254.1| exo-poly-alpha-D-galacturonosidase precursor [Bacteroides
thetaiotaomicron VPI-5482]
Length = 352
Score = 42.4 bits (98), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 43/89 (48%), Gaps = 3/89 (3%)
Query: 62 PDSCAAGLLGDQYLPERKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNV 121
PD A +G + LP K+ +S FG V D T +TEA +KA+ GG + +
Sbjct: 38 PDLSWADSVGSRQLPGDKMIISANSFGAVADSTVLSTEAIQKAI---DSCAVSGGGTVVL 94
Query: 122 PEGLWLTGSFNLTSNFTLFLERGAVMLGS 150
G + TG+ + S L + +G +L S
Sbjct: 95 QPGYYQTGALFVKSGVNLQIGKGVTLLAS 123
>gi|333381519|ref|ZP_08473201.1| hypothetical protein HMPREF9455_01367 [Dysgonomonas gadei ATCC
BAA-286]
gi|332830489|gb|EGK03117.1| hypothetical protein HMPREF9455_01367 [Dysgonomonas gadei ATCC
BAA-286]
Length = 440
Score = 42.4 bits (98), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 36/65 (55%), Gaps = 5/65 (7%)
Query: 76 PERKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWL-TGSFNLT 134
PE +S KDFG DG T +T+A +KA M FG +GG + +P G +L GS N+
Sbjct: 35 PESVDVVSAKDFGAKADGITDDTDAIQKA---MNSFGKRGGT-VYLPNGTYLIAGSLNIP 90
Query: 135 SNFTL 139
TL
Sbjct: 91 QAVTL 95
>gi|266624154|ref|ZP_06117089.1| putative polygalacturonase [Clostridium hathewayi DSM 13479]
gi|288864021|gb|EFC96319.1| putative polygalacturonase [Clostridium hathewayi DSM 13479]
Length = 509
Score = 42.4 bits (98), Expect = 0.061, Method: Composition-based stats.
Identities = 27/76 (35%), Positives = 43/76 (56%), Gaps = 7/76 (9%)
Query: 77 ERKVAMSIK--DFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLT 134
++KV + I + VGDG T NT ++A+ D+ L P+G++LTG+ L
Sbjct: 84 KKKVLLDITRGPYHAVGDGKTLNTAVIQRAIDDCM---DEEAVYL--PKGVFLTGALRLH 138
Query: 135 SNFTLFLERGAVMLGS 150
S+ L+LE GAV+ G+
Sbjct: 139 SDMELYLEEGAVLQGT 154
>gi|189466665|ref|ZP_03015450.1| hypothetical protein BACINT_03040 [Bacteroides intestinalis DSM
17393]
gi|189434929|gb|EDV03914.1| polygalacturonase (pectinase) [Bacteroides intestinalis DSM 17393]
Length = 457
Score = 42.4 bits (98), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 38/68 (55%), Gaps = 3/68 (4%)
Query: 83 SIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFLE 142
++K +G G+G ++ A +KA+ GG + VP G +L+ + L N TL LE
Sbjct: 26 NVKKYGARGNGKKMDSPAIQKAIDACH---KAGGGTVLVPAGTYLSATIVLKDNVTLHLE 82
Query: 143 RGAVMLGS 150
+ A++LG+
Sbjct: 83 KDALILGT 90
>gi|224536548|ref|ZP_03677087.1| hypothetical protein BACCELL_01423 [Bacteroides cellulosilyticus
DSM 14838]
gi|224521804|gb|EEF90909.1| hypothetical protein BACCELL_01423 [Bacteroides cellulosilyticus
DSM 14838]
Length = 525
Score = 42.4 bits (98), Expect = 0.064, Method: Composition-based stats.
Identities = 21/68 (30%), Positives = 37/68 (54%), Gaps = 3/68 (4%)
Query: 83 SIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFLE 142
++ D+G + S T + +K + GG + +P G +++G+ L +N LFL+
Sbjct: 27 NVTDYGVKANSGRSETASLQKIIDLCS---TNGGGTVCIPTGTYISGTLFLKNNVMLFLD 83
Query: 143 RGAVMLGS 150
RGAV+ GS
Sbjct: 84 RGAVLRGS 91
>gi|390436865|ref|ZP_10225403.1| polygalacturonase [Pantoea agglomerans IG1]
Length = 430
Score = 42.4 bits (98), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 40/70 (57%), Gaps = 5/70 (7%)
Query: 82 MSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFL 141
++I DF V D T+ +T+A ++A+ G + +P G +LTG+ L S TL L
Sbjct: 4 INIIDFDAVPDATSLSTQAIQRAIDSA-----AEGDTVLIPAGRFLTGALFLKSKMTLEL 58
Query: 142 ERGAVMLGSQ 151
+ AV+LGSQ
Sbjct: 59 AKDAVLLGSQ 68
>gi|372276037|ref|ZP_09512073.1| polygalacturonase [Pantoea sp. SL1_M5]
Length = 430
Score = 42.4 bits (98), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 40/70 (57%), Gaps = 5/70 (7%)
Query: 82 MSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFL 141
++I DF V D T+ +T+A ++A+ G + +P G +LTG+ L S TL L
Sbjct: 4 INIIDFDAVPDATSLSTQAIQRAIDSA-----AEGDTVLIPAGRFLTGALFLKSKMTLEL 58
Query: 142 ERGAVMLGSQ 151
+ AV+LGSQ
Sbjct: 59 AKDAVLLGSQ 68
>gi|398304349|ref|ZP_10507935.1| putative phage-related pre-neck appendage protein [Bacillus
vallismortis DV1-F-3]
Length = 694
Score = 42.4 bits (98), Expect = 0.068, Method: Composition-based stats.
Identities = 23/61 (37%), Positives = 34/61 (55%), Gaps = 8/61 (13%)
Query: 80 VAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTL 139
+ +SI FG GDG T +T+AF+KA+ D GG ++ +P G +L G + SN
Sbjct: 62 IGVSIAKFGAKGDGVTDDTDAFQKAL-------DIGG-KVIIPSGTYLVGQLKINSNTHF 113
Query: 140 F 140
F
Sbjct: 114 F 114
>gi|373958218|ref|ZP_09618178.1| glycoside hydrolase family 28 [Mucilaginibacter paludis DSM 18603]
gi|373894818|gb|EHQ30715.1| glycoside hydrolase family 28 [Mucilaginibacter paludis DSM 18603]
Length = 510
Score = 42.4 bits (98), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 39/69 (56%), Gaps = 3/69 (4%)
Query: 83 SIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFLE 142
++K +G GDG +T+A KA+ GG + P G +L+ + +L SN LFL+
Sbjct: 31 NVKAYGAKGDGENLDTKAIDKAIETAAA---AGGGTVYFPAGNYLSVTIHLKSNVGLFLD 87
Query: 143 RGAVMLGSQ 151
+G+ ++ S+
Sbjct: 88 QGSTLIASE 96
>gi|427388107|ref|ZP_18883990.1| hypothetical protein HMPREF9447_05023 [Bacteroides oleiciplenus YIT
12058]
gi|425724690|gb|EKU87564.1| hypothetical protein HMPREF9447_05023 [Bacteroides oleiciplenus YIT
12058]
Length = 487
Score = 42.4 bits (98), Expect = 0.069, Method: Composition-based stats.
Identities = 25/63 (39%), Positives = 32/63 (50%), Gaps = 3/63 (4%)
Query: 88 GGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFLERGAVM 147
G GDG T NT +KAV KGG + +P G +L L SN L L+ G ++
Sbjct: 31 GAKGDGVTDNTIIIQKAV---DECSKKGGGTVLIPSGSYLIRPIELKSNVNLHLDFGTLL 87
Query: 148 LGS 150
LGS
Sbjct: 88 LGS 90
>gi|260642326|ref|ZP_05415427.2| putative exo-poly-alpha-D-galacturonosidase [Bacteroides finegoldii
DSM 17565]
gi|260622463|gb|EEX45334.1| polygalacturonase (pectinase) [Bacteroides finegoldii DSM 17565]
Length = 456
Score = 42.4 bits (98), Expect = 0.069, Method: Composition-based stats.
Identities = 27/64 (42%), Positives = 34/64 (53%), Gaps = 5/64 (7%)
Query: 88 GGVGDGTTSNTEAFRKAV-RYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFLERGAV 146
G +G T NT+ + R +G GG L P G +LTGS +L SN TL LE GA
Sbjct: 40 GAKANGKTLNTKLINSTIDRLNRG----GGGTLFFPAGTYLTGSIHLKSNITLELEAGAT 95
Query: 147 MLGS 150
+L S
Sbjct: 96 LLFS 99
>gi|189465212|ref|ZP_03013997.1| hypothetical protein BACINT_01557 [Bacteroides intestinalis DSM
17393]
gi|189437486|gb|EDV06471.1| polygalacturonase (pectinase) [Bacteroides intestinalis DSM 17393]
Length = 487
Score = 42.4 bits (98), Expect = 0.069, Method: Composition-based stats.
Identities = 25/63 (39%), Positives = 32/63 (50%), Gaps = 3/63 (4%)
Query: 88 GGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFLERGAVM 147
G GDG T NT +KAV KGG + +P G +L L SN L L+ G ++
Sbjct: 31 GAKGDGVTDNTIIIQKAV---DECSKKGGGTVLIPSGSYLIRPIELKSNVNLHLDFGTLL 87
Query: 148 LGS 150
LGS
Sbjct: 88 LGS 90
>gi|160886115|ref|ZP_02067118.1| hypothetical protein BACOVA_04122 [Bacteroides ovatus ATCC 8483]
gi|156108928|gb|EDO10673.1| polygalacturonase (pectinase) [Bacteroides ovatus ATCC 8483]
Length = 459
Score = 42.4 bits (98), Expect = 0.069, Method: Composition-based stats.
Identities = 27/64 (42%), Positives = 34/64 (53%), Gaps = 5/64 (7%)
Query: 88 GGVGDGTTSNTEAFRKAV-RYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFLERGAV 146
G +G T NT+ + R +G GG L P G +LTGS +L SN TL LE GA
Sbjct: 39 GAKANGKTLNTKLINSTIDRLNRG----GGGTLFFPAGTYLTGSIHLKSNITLELEAGAT 94
Query: 147 MLGS 150
+L S
Sbjct: 95 LLFS 98
>gi|257440293|ref|ZP_05616048.1| polygalacturonase [Faecalibacterium prausnitzii A2-165]
gi|257197327|gb|EEU95611.1| polygalacturonase (pectinase) [Faecalibacterium prausnitzii A2-165]
Length = 518
Score = 42.4 bits (98), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 36/65 (55%), Gaps = 5/65 (7%)
Query: 87 FGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFLERGAV 146
+G V DGTT NT + A+ KGG + VP G + T S + S TL+LE+GAV
Sbjct: 87 YGLVADGTTDNTGKLQAALSTCP----KGGT-VYVPAGRYRTSSLFMKSCTTLYLEKGAV 141
Query: 147 MLGSQ 151
+LG
Sbjct: 142 LLGDN 146
>gi|329894082|ref|ZP_08270067.1| Glycoside hydrolase, family 77 [gamma proteobacterium IMCC3088]
gi|328923254|gb|EGG30574.1| Glycoside hydrolase, family 77 [gamma proteobacterium IMCC3088]
Length = 487
Score = 42.4 bits (98), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 37/64 (57%), Gaps = 3/64 (4%)
Query: 84 IKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFLER 143
+++FG V DG ++A +KA+ + + +GG + +G++LTG +L S L LE+
Sbjct: 63 VENFGAVSDGVFDCSDAIQKAIEHAES---QGGGTVVFTQGVYLTGPIHLRSKIALHLEK 119
Query: 144 GAVM 147
A +
Sbjct: 120 DATL 123
>gi|266623900|ref|ZP_06116835.1| putative polygalacturonase [Clostridium hathewayi DSM 13479]
gi|288864287|gb|EFC96585.1| putative polygalacturonase [Clostridium hathewayi DSM 13479]
Length = 537
Score = 42.4 bits (98), Expect = 0.071, Method: Composition-based stats.
Identities = 24/70 (34%), Positives = 39/70 (55%), Gaps = 5/70 (7%)
Query: 80 VAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTL 139
V ++++ FG GDG +T A + A+ G ++ +PEG +L S L S+FTL
Sbjct: 80 VTLNVRRFGAKGDGIHDDTLAIQTAIASCPKDG-----RVYIPEGKYLVTSLFLKSDFTL 134
Query: 140 FLERGAVMLG 149
+ + AV+LG
Sbjct: 135 DIGKNAVLLG 144
>gi|251788461|ref|YP_003003182.1| glycoside hydrolase family 28 [Dickeya zeae Ech1591]
gi|247537082|gb|ACT05703.1| glycoside hydrolase family 28 [Dickeya zeae Ech1591]
Length = 444
Score = 42.0 bits (97), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 36/67 (53%), Gaps = 3/67 (4%)
Query: 84 IKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFLER 143
I+ + DG T +T F++A+ + +GG L V G +L G +L SNF L L+
Sbjct: 5 IRAYHPAADGITPDTALFQQAIDELAA---QGGGTLVVEPGRYLLGGLHLPSNFCLQLDA 61
Query: 144 GAVMLGS 150
GA ++ S
Sbjct: 62 GAELIAS 68
>gi|427386645|ref|ZP_18882842.1| hypothetical protein HMPREF9447_03875 [Bacteroides oleiciplenus YIT
12058]
gi|425726135|gb|EKU89001.1| hypothetical protein HMPREF9447_03875 [Bacteroides oleiciplenus YIT
12058]
Length = 455
Score = 42.0 bits (97), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 38/68 (55%), Gaps = 3/68 (4%)
Query: 83 SIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFLE 142
++K +G G+G ++ A +KA+ GG + VP G +L+ + L N TL LE
Sbjct: 24 NVKKYGARGNGKKLDSPAIQKAIDACH---KAGGGTVLVPAGTYLSATIVLKDNVTLHLE 80
Query: 143 RGAVMLGS 150
+ A++LG+
Sbjct: 81 KDALILGT 88
>gi|300725841|ref|ZP_07059307.1| exo-poly-alpha-D-galacturonosidase [Prevotella bryantii B14]
gi|299776888|gb|EFI73432.1| exo-poly-alpha-D-galacturonosidase [Prevotella bryantii B14]
Length = 447
Score = 42.0 bits (97), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 33/64 (51%), Gaps = 3/64 (4%)
Query: 82 MSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFL 141
+SI DFG NT A +A++ GG ++ +P G W+TG+ + SN L+L
Sbjct: 26 VSIIDFGAQCGPDHVNTMAINQAIK---AVSQHGGGKVIIPAGYWMTGAIEMQSNVNLYL 82
Query: 142 ERGA 145
+ A
Sbjct: 83 DYNA 86
>gi|433656005|ref|YP_007299713.1| endopolygalacturonase [Thermoanaerobacterium thermosaccharolyticum
M0795]
gi|433294194|gb|AGB20016.1| endopolygalacturonase [Thermoanaerobacterium thermosaccharolyticum
M0795]
Length = 519
Score = 42.0 bits (97), Expect = 0.076, Method: Composition-based stats.
Identities = 24/70 (34%), Positives = 40/70 (57%), Gaps = 5/70 (7%)
Query: 82 MSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFL 141
++++DFG GDG +T + + A+ G ++ EG++LT L SN TL L
Sbjct: 84 INVRDFGANGDGKRIDTFSIQAAI-----ISCPDGGRVFFHEGIYLTYPLFLKSNITLEL 138
Query: 142 ERGAVMLGSQ 151
+GAV+LG++
Sbjct: 139 GKGAVLLGAK 148
>gi|325972835|ref|YP_004249026.1| polygalacturonase [Sphaerochaeta globus str. Buddy]
gi|324028073|gb|ADY14832.1| Polygalacturonase [Sphaerochaeta globus str. Buddy]
Length = 453
Score = 42.0 bits (97), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 39/66 (59%), Gaps = 6/66 (9%)
Query: 83 SIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSN-FTLFL 141
++K FG VG+G + +EAF KA+ + G L++ EG +LTG ++ + L L
Sbjct: 5 TLKSFGAVGNGQQNESEAFAKALAAL-----SDGGVLHIEEGTYLTGPLHIQAKGLVLEL 59
Query: 142 ERGAVM 147
+RGAV+
Sbjct: 60 DRGAVI 65
>gi|423226766|ref|ZP_17213231.1| hypothetical protein HMPREF1062_05417 [Bacteroides cellulosilyticus
CL02T12C19]
gi|392627039|gb|EIY21080.1| hypothetical protein HMPREF1062_05417 [Bacteroides cellulosilyticus
CL02T12C19]
Length = 487
Score = 42.0 bits (97), Expect = 0.077, Method: Composition-based stats.
Identities = 25/63 (39%), Positives = 32/63 (50%), Gaps = 3/63 (4%)
Query: 88 GGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFLERGAVM 147
G GDG T NT +KAV KGG + +P G +L L SN L L+ G ++
Sbjct: 31 GAKGDGVTDNTIIIQKAV---DECSKKGGGTVLIPSGSYLIRPIELKSNVNLHLDFGTLL 87
Query: 148 LGS 150
LGS
Sbjct: 88 LGS 90
>gi|224537538|ref|ZP_03678077.1| hypothetical protein BACCELL_02417 [Bacteroides cellulosilyticus
DSM 14838]
gi|224520851|gb|EEF89956.1| hypothetical protein BACCELL_02417 [Bacteroides cellulosilyticus
DSM 14838]
Length = 496
Score = 42.0 bits (97), Expect = 0.077, Method: Composition-based stats.
Identities = 25/63 (39%), Positives = 32/63 (50%), Gaps = 3/63 (4%)
Query: 88 GGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFLERGAVM 147
G GDG T NT +KAV KGG + +P G +L L SN L L+ G ++
Sbjct: 40 GAKGDGVTDNTIIIQKAV---DECSKKGGGTVLIPSGSYLIRPIELKSNVNLHLDFGTLL 96
Query: 148 LGS 150
LGS
Sbjct: 97 LGS 99
>gi|427385675|ref|ZP_18881982.1| hypothetical protein HMPREF9447_03015 [Bacteroides oleiciplenus YIT
12058]
gi|425726714|gb|EKU89577.1| hypothetical protein HMPREF9447_03015 [Bacteroides oleiciplenus YIT
12058]
Length = 532
Score = 42.0 bits (97), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 41/89 (46%), Gaps = 3/89 (3%)
Query: 62 PDSCAAGLLGDQYLPERKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNV 121
PD A +G + LP+ +S FG V D T +T A +KA+ GG + +
Sbjct: 64 PDFSWAENVGSRQLPDSSTVVSANSFGAVADSTVLSTNAIQKAI---DSCALSGGGTVTL 120
Query: 122 PEGLWLTGSFNLTSNFTLFLERGAVMLGS 150
G +LTG+ + S L + +G ++
Sbjct: 121 QPGYYLTGALFVKSGVNLQISKGVTLIAC 149
>gi|225165583|ref|ZP_03727398.1| glycoside hydrolase family 28 [Diplosphaera colitermitum TAV2]
gi|224800169|gb|EEG18584.1| glycoside hydrolase family 28 [Diplosphaera colitermitum TAV2]
Length = 421
Score = 42.0 bits (97), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 36/71 (50%), Gaps = 3/71 (4%)
Query: 81 AMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLF 140
A ++ + G G S T AF A+ + +GG L VP G WLTG L S+ L
Sbjct: 18 ATNLLEHGAQEGGIQSCTTAFANAIDTLAA---QGGGTLTVPAGRWLTGPICLRSHIRLH 74
Query: 141 LERGAVMLGSQ 151
LE GA ++ S+
Sbjct: 75 LETGAHVVFSR 85
>gi|374312327|ref|YP_005058757.1| glycoside hydrolase family protein [Granulicella mallensis
MP5ACTX8]
gi|358754337|gb|AEU37727.1| glycoside hydrolase family 28 [Granulicella mallensis MP5ACTX8]
Length = 543
Score = 42.0 bits (97), Expect = 0.079, Method: Composition-based stats.
Identities = 28/66 (42%), Positives = 37/66 (56%), Gaps = 3/66 (4%)
Query: 85 KDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFLERG 144
+D G GDG T NT A +KAV GG + +P G +L+G L S+ TL LE G
Sbjct: 33 RDTGARGDGHTLNTNALQKAVDQAA---AAGGGVVVIPPGDFLSGGLVLRSHVTLHLEAG 89
Query: 145 AVMLGS 150
A++ GS
Sbjct: 90 AILRGS 95
>gi|414344702|ref|YP_006986194.1| glycoside hydrolase family protein [Gluconobacter oxydans H24]
gi|411030009|gb|AFW03263.1| glycoside hydrolase family 28 [Gluconobacter oxydans H24]
Length = 477
Score = 42.0 bits (97), Expect = 0.080, Method: Composition-based stats.
Identities = 20/59 (33%), Positives = 37/59 (62%), Gaps = 3/59 (5%)
Query: 92 DGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFLERGAVMLGS 150
DG T++ A ++A+ + GG +++ G+WL+G +L ++ TL LE+G+ +LGS
Sbjct: 61 DGRTNDGPAIQRAI---TACSEAGGGVVSLASGIWLSGPLSLKNHVTLNLEKGSTLLGS 116
>gi|402494827|ref|ZP_10841563.1| glycoside hydrolase family protein [Aquimarina agarilytica ZC1]
Length = 460
Score = 42.0 bits (97), Expect = 0.080, Method: Composition-based stats.
Identities = 24/73 (32%), Positives = 37/73 (50%), Gaps = 3/73 (4%)
Query: 78 RKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNF 137
+K I+DFG D T NT A +KA+ +GG ++ V G ++TG+ L +N
Sbjct: 21 KKKTFDIRDFGAQADTLTVNTIAIQKAINACH---KQGGGKVVVSNGTYITGTVLLKNNV 77
Query: 138 TLFLERGAVMLGS 150
L + V+ GS
Sbjct: 78 HLVIHENGVLKGS 90
>gi|359413926|ref|ZP_09206391.1| glycoside hydrolase family 28 [Clostridium sp. DL-VIII]
gi|357172810|gb|EHJ00985.1| glycoside hydrolase family 28 [Clostridium sp. DL-VIII]
Length = 448
Score = 42.0 bits (97), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 38/68 (55%), Gaps = 3/68 (4%)
Query: 83 SIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFLE 142
+I ++G DG T+N EA +K + GG ++ +P+G +L+G+ L SN L LE
Sbjct: 5 NILNYGAKPDGITNNREAIQKTIDECTA---GGGGRVIIPKGNFLSGTLILKSNIDLHLE 61
Query: 143 RGAVMLGS 150
GA + S
Sbjct: 62 SGAYLSCS 69
>gi|182416077|ref|YP_001821143.1| glycosyl hydrolase [Opitutus terrae PB90-1]
gi|177843291|gb|ACB77543.1| glycosyl hydrolase family 88 [Opitutus terrae PB90-1]
Length = 865
Score = 42.0 bits (97), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 36/73 (49%), Gaps = 7/73 (9%)
Query: 75 LPERKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLT 134
P+R I DFG D T+A R A+ GG ++ VP G WLTG+ +L
Sbjct: 443 FPDRD--FPITDFGAKPDADC--TDAIRAAI---DACHQAGGGRVVVPAGEWLTGAIHLR 495
Query: 135 SNFTLFLERGAVM 147
SN L + +GA +
Sbjct: 496 SNVNLHVAKGATL 508
>gi|393788323|ref|ZP_10376453.1| hypothetical protein HMPREF1068_02733 [Bacteroides nordii
CL02T12C05]
gi|392655996|gb|EIY49637.1| hypothetical protein HMPREF1068_02733 [Bacteroides nordii
CL02T12C05]
Length = 457
Score = 42.0 bits (97), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 38/68 (55%), Gaps = 3/68 (4%)
Query: 83 SIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFLE 142
++K +G G+G ++ A +KA+ GG + VP G +L+ + L N TL LE
Sbjct: 26 NVKKYGARGNGKKLDSPAIQKAIDACH---KAGGGTVLVPAGTYLSATIVLKDNVTLHLE 82
Query: 143 RGAVMLGS 150
+ A++LG+
Sbjct: 83 KDALILGT 90
>gi|397656507|ref|YP_006497209.1| exo-poly-alpha-D-galacturonosidase [Klebsiella oxytoca E718]
gi|394345096|gb|AFN31217.1| Exo-poly-alpha-D-galacturonosidase precursor [Klebsiella oxytoca
E718]
Length = 658
Score = 42.0 bits (97), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 37/64 (57%)
Query: 87 FGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFLERGAV 146
FG GDGTT NT+A ++A+ G ++ + +G + TG+ L S+ TL + GA
Sbjct: 169 FGAKGDGTTLNTQALQQAIDSCTVAHYPQGCKVVISDGEFKTGALFLHSDMTLEIAAGAT 228
Query: 147 MLGS 150
+LGS
Sbjct: 229 LLGS 232
>gi|430744742|ref|YP_007203871.1| hypothetical protein Sinac_3948 [Singulisphaera acidiphila DSM
18658]
gi|430016462|gb|AGA28176.1| hypothetical protein Sinac_3948 [Singulisphaera acidiphila DSM
18658]
Length = 428
Score = 42.0 bits (97), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 38/70 (54%), Gaps = 13/70 (18%)
Query: 83 SIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFLE 142
+++DFG VGDG T+A R AV ++GG QL+ P G++ LT+ + L+
Sbjct: 3 NVRDFGAVGDGRADETKALRHAV-------EQGGGQLDFPR-----GTYRLTAPLEIDLD 50
Query: 143 R-GAVMLGSQ 151
R G + L Q
Sbjct: 51 RSGPIALCGQ 60
>gi|374313006|ref|YP_005059436.1| hypothetical protein [Granulicella mallensis MP5ACTX8]
gi|358755016|gb|AEU38406.1| hypothetical protein AciX8_4125 [Granulicella mallensis MP5ACTX8]
Length = 573
Score = 42.0 bits (97), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 35/69 (50%), Gaps = 3/69 (4%)
Query: 83 SIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFLE 142
+++ +G GDG T +T A KA+ + GG L P G ++ + +L S L+L
Sbjct: 53 NVRTYGATGDGKTVDTPAINKAI---EAVAAAGGGTLLFPAGTYMCFTIHLRSRVDLYLS 109
Query: 143 RGAVMLGSQ 151
RG +L +
Sbjct: 110 RGCTILAAD 118
>gi|336314135|ref|ZP_08569056.1| endopolygalacturonase [Rheinheimera sp. A13L]
gi|335881648|gb|EGM79526.1| endopolygalacturonase [Rheinheimera sp. A13L]
Length = 479
Score = 42.0 bits (97), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 38/79 (48%), Gaps = 1/79 (1%)
Query: 70 LGDQYLPERKV-AMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLT 128
L +Q L + K+ + +DF G N + + GG ++ VPEG+W T
Sbjct: 43 LAEQILRDIKLTSFPQRDFVITAFGAKQNQRCDKAITEAIAACHKAGGGRVVVPEGVWST 102
Query: 129 GSFNLTSNFTLFLERGAVM 147
G +L SN L L++ AV+
Sbjct: 103 GPVHLKSNVNLHLQKNAVL 121
>gi|375259440|ref|YP_005018610.1| fibronectin type III domain-containing protein [Klebsiella oxytoca
KCTC 1686]
gi|365908918|gb|AEX04371.1| Fibronectin type III domain protein [Klebsiella oxytoca KCTC 1686]
Length = 658
Score = 42.0 bits (97), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 37/64 (57%)
Query: 87 FGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFLERGAV 146
FG GDGTT NT+A ++A+ G ++ + +G + TG+ L S+ TL + GA
Sbjct: 169 FGAKGDGTTLNTQALQQAIDSCTVAHYPQGCKVVISDGEFKTGALFLHSDMTLEIAAGAT 228
Query: 147 MLGS 150
+LGS
Sbjct: 229 LLGS 232
>gi|452975827|gb|EME75644.1| pre-neck appendage protein [Bacillus sonorensis L12]
Length = 810
Score = 42.0 bits (97), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 37/63 (58%), Gaps = 9/63 (14%)
Query: 82 MSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFL 141
++++DFG V DG NTEAFRKA+ G ++NVP G++L L S +T F+
Sbjct: 86 VNVEDFGAVADGR-DNTEAFRKAI-------GNGHVKINVPAGVYLVQGIKLPS-WTYFV 136
Query: 142 ERG 144
+G
Sbjct: 137 GQG 139
>gi|82524094|emb|CAJ19131.1| putative endopolygalacturonase [unidentified microorganism]
Length = 448
Score = 41.6 bits (96), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 44/78 (56%), Gaps = 14/78 (17%)
Query: 75 LPERKVAMSIKDFGGVGDGTTSN----TEAFRKAVRYMQGFGDKGGAQLNVPEGL-WLTG 129
+PE ++I+ G G+GTT +AF+KAVR KGGA++ VP G+ ++ G
Sbjct: 30 IPE--YVINIQKMGAKGNGTTDCLPAFKKAFKKAVR-------KGGARIVVPAGVYYIKG 80
Query: 130 SFNLTSNFTLFLERGAVM 147
+L SN L ++ GA +
Sbjct: 81 PLHLVSNVCLEIQEGATL 98
>gi|374376177|ref|ZP_09633835.1| Polygalacturonase [Niabella soli DSM 19437]
gi|373233017|gb|EHP52812.1| Polygalacturonase [Niabella soli DSM 19437]
Length = 437
Score = 41.6 bits (96), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 36/66 (54%), Gaps = 5/66 (7%)
Query: 83 SIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDK-GGAQLNVPEGLWLTGSFNLTSNFTLFL 141
SIKDFG + + +T NT ++A+ DK GG + +P G++L G S+ +
Sbjct: 40 SIKDFGAIANNSTDNTGVIQQAIDA----ADKAGGGTVIIPPGIYLCGPLQFKSSLNFRI 95
Query: 142 ERGAVM 147
+ GAV+
Sbjct: 96 DSGAVL 101
>gi|150004707|ref|YP_001299451.1| glycoside hydrolase [Bacteroides vulgatus ATCC 8482]
gi|149933131|gb|ABR39829.1| glycoside hydrolase family 28 [Bacteroides vulgatus ATCC 8482]
Length = 625
Score = 41.6 bits (96), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 38/68 (55%), Gaps = 3/68 (4%)
Query: 83 SIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFLE 142
++ +G +GDG+T NT A +KA+ GG + + G ++TG+ L S L +
Sbjct: 60 DVRKYGAIGDGSTLNTTAIQKAI---DACFVAGGGTVRIAGGEYVTGTIELKSGVMLEVA 116
Query: 143 RGAVMLGS 150
+GA +LGS
Sbjct: 117 KGARLLGS 124
>gi|227537595|ref|ZP_03967644.1| conserved hypothetical protein [Sphingobacterium spiritivorum ATCC
33300]
gi|227242544|gb|EEI92559.1| conserved hypothetical protein [Sphingobacterium spiritivorum ATCC
33300]
Length = 172
Score = 41.6 bits (96), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 38/73 (52%), Gaps = 3/73 (4%)
Query: 79 KVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFT 138
K + DFG DG T +T+A ++A+ KGG ++ G +LTGS + S
Sbjct: 50 KAVVYANDFGAREDGMTISTKAIQQAI---DACAKKGGGKVQFRPGKYLTGSIFIKSGVF 106
Query: 139 LFLERGAVMLGSQ 151
L ++ G +LGSQ
Sbjct: 107 LHVDEGVELLGSQ 119
>gi|399029277|ref|ZP_10730250.1| endopolygalacturonase [Flavobacterium sp. CF136]
gi|398072887|gb|EJL64081.1| endopolygalacturonase [Flavobacterium sp. CF136]
Length = 563
Score = 41.6 bits (96), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 35/71 (49%), Gaps = 3/71 (4%)
Query: 78 RKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNF 137
+K ++I DFG V + T+A A+ + GG + +P GLW TG L SN
Sbjct: 55 KKDTLNIVDFGAVPNTGELCTKAINDAI---MKCSESGGGVVAIPSGLWTTGPIYLKSNV 111
Query: 138 TLFLERGAVML 148
L + GA +L
Sbjct: 112 NLHTQNGAYIL 122
>gi|397689076|ref|YP_006526330.1| glycoside hydrolase family 28 [Melioribacter roseus P3M]
gi|395810568|gb|AFN73317.1| glycoside hydrolase family 28 [Melioribacter roseus P3M]
Length = 469
Score = 41.6 bits (96), Expect = 0.10, Method: Composition-based stats.
Identities = 23/69 (33%), Positives = 41/69 (59%), Gaps = 3/69 (4%)
Query: 83 SIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGL-WLTGSFNLTSNFTLFL 141
++ FG GDG T +T+A + A+ + + G A++ +PEG +LTG+ L S F+
Sbjct: 39 NVLKFGAAGDGKTLDTKAIQNAID--KAHAEGGNAKVIIPEGYKFLTGTIVLKSGVEFFI 96
Query: 142 ERGAVMLGS 150
++GA ++ S
Sbjct: 97 DQGAELIIS 105
>gi|448413184|ref|ZP_21577030.1| glycoside hydrolase family 28 [Halosimplex carlsbadense 2-9-1]
gi|445667365|gb|ELZ20009.1| glycoside hydrolase family 28 [Halosimplex carlsbadense 2-9-1]
Length = 515
Score = 41.6 bits (96), Expect = 0.11, Method: Composition-based stats.
Identities = 24/64 (37%), Positives = 34/64 (53%), Gaps = 4/64 (6%)
Query: 84 IKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFLER 143
++DFG VG G +T A + A+ G G + VP G +LTG + S+ TL LE
Sbjct: 10 VRDFGAVGTGDERDTAALQSALDECAG----TGGTVVVPSGKYLTGPLTVGSHTTLELEA 65
Query: 144 GAVM 147
GA +
Sbjct: 66 GATL 69
>gi|325970193|ref|YP_004246384.1| glycoside hydrolase family protein [Sphaerochaeta globus str.
Buddy]
gi|324025431|gb|ADY12190.1| glycoside hydrolase family 28 [Sphaerochaeta globus str. Buddy]
Length = 437
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 42/82 (51%), Gaps = 10/82 (12%)
Query: 72 DQYLPERKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQ---LNVPEGLWLT 128
D Y + + I+ FG +GDG T NT A + A+ D+ Q + V +G++L+
Sbjct: 14 DVYTEGAVMELDIRAFGAIGDGRTLNTLAIQAAI-------DEAATQQAVVVVADGIYLS 66
Query: 129 GSFNLTSNFTLFLERGAVMLGS 150
G+ L L + +GA +LGS
Sbjct: 67 GALFLKQGMALEIRKGATLLGS 88
>gi|255533000|ref|YP_003093372.1| glycoside hydrolase family protein [Pedobacter heparinus DSM 2366]
gi|255345984|gb|ACU05310.1| glycoside hydrolase family 28 [Pedobacter heparinus DSM 2366]
Length = 524
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 39/81 (48%), Gaps = 3/81 (3%)
Query: 69 LLGDQYLPERKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLT 128
LL + R + + +G GDG T NT A +K++ GG ++ P G +++
Sbjct: 15 LLTSISILTRAADVEVTTYGAKGDGLTVNTTAIQKSI---DACAASGGGKVIFPAGHFMS 71
Query: 129 GSFNLTSNFTLFLERGAVMLG 149
+ L SN TL+L G + G
Sbjct: 72 ATVVLKSNVTLYLSDGCTLTG 92
>gi|329956837|ref|ZP_08297405.1| polygalacturonase [Bacteroides clarus YIT 12056]
gi|328523594|gb|EGF50686.1| polygalacturonase [Bacteroides clarus YIT 12056]
Length = 439
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 38/68 (55%), Gaps = 3/68 (4%)
Query: 83 SIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFLE 142
++K +G G+G ++ A +KA+ GG + VP G +L+ + L N TL LE
Sbjct: 8 NVKKYGAKGNGRKMDSPAIQKAI---DACHKAGGGTVIVPAGTYLSATIVLKDNVTLRLE 64
Query: 143 RGAVMLGS 150
+ A++LG+
Sbjct: 65 KDALILGT 72
>gi|227327885|ref|ZP_03831909.1| exo-poly-alpha-D-galacturonosidase [Pectobacterium carotovorum
subsp. carotovorum WPP14]
Length = 659
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 41/70 (58%)
Query: 81 AMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLF 140
++++ ++G GDG T++T A +KA+ G ++ V G + TG+ L S+ T
Sbjct: 162 SLNVTNYGAKGDGVTNDTVAIQKAIDDCTPAAYPKGCKVVVEGGTFKTGALFLHSDMTFE 221
Query: 141 LERGAVMLGS 150
+ +GA++LGS
Sbjct: 222 VAKGAILLGS 231
>gi|398899483|ref|ZP_10649037.1| endopolygalacturonase [Pseudomonas sp. GM50]
gi|398182587|gb|EJM70098.1| endopolygalacturonase [Pseudomonas sp. GM50]
Length = 605
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 40/68 (58%), Gaps = 5/68 (7%)
Query: 84 IKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFLER 143
+K +G GDG++ +T A + A+ G ++ +P+G++ +G+ L SN TL +
Sbjct: 158 VKKYGAKGDGSSLDTLAIQNAIEAC-----TVGCKVLLPKGIYKSGALYLKSNMTLEIAE 212
Query: 144 GAVMLGSQ 151
GA +LGS+
Sbjct: 213 GATLLGSE 220
>gi|356572058|ref|XP_003554187.1| PREDICTED: exo-poly-alpha-D-galacturonosidase-like [Glycine max]
Length = 466
Score = 41.2 bits (95), Expect = 0.13, Method: Composition-based stats.
Identities = 26/70 (37%), Positives = 35/70 (50%), Gaps = 2/70 (2%)
Query: 80 VAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTL 139
V +S+ DFG GDG +TEA + A+ GD P G +LT + L S L
Sbjct: 30 VTLSVADFGAAGDGLRYDTEAIQSAINSCPE-GDPCHVTFPAP-GKYLTATVFLKSGVVL 87
Query: 140 FLERGAVMLG 149
+E GA +LG
Sbjct: 88 NVESGATILG 97
>gi|239628552|ref|ZP_04671583.1| glycoside hydrolase [Clostridiales bacterium 1_7_47_FAA]
gi|239518698|gb|EEQ58564.1| glycoside hydrolase [Clostridiales bacterium 1_7_47FAA]
Length = 695
Score = 41.2 bits (95), Expect = 0.13, Method: Composition-based stats.
Identities = 22/73 (30%), Positives = 41/73 (56%), Gaps = 5/73 (6%)
Query: 70 LGDQYLPERKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTG 129
+ D P+ + +++ D+G V D +T+A +KA+ + +KGG ++ +P+G + TG
Sbjct: 9 ISDPRFPD--LTVNVLDYGAVADDDKLDTQAIQKAIDEVS---EKGGGKVVIPKGTYDTG 63
Query: 130 SFNLTSNFTLFLE 142
+ L N L LE
Sbjct: 64 AITLKDNVNLCLE 76
>gi|115524468|ref|YP_781379.1| diguanylate cyclase/phosphodiesterase [Rhodopseudomonas palustris
BisA53]
gi|115518415|gb|ABJ06399.1| diguanylate cyclase/phosphodiesterase [Rhodopseudomonas palustris
BisA53]
Length = 666
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 33/63 (52%), Gaps = 4/63 (6%)
Query: 38 EITKKSVLSPKRVGFSGADGAIFDPDSCAAGLLGDQYLPERKVAMSIKDFGGVGDGTTSN 97
E+T + + PKR+ + A+FDP CA L Q + E ++I DF GVG + SN
Sbjct: 504 ELTSRYSIDPKRIEIEVTEEALFDPKHCATEL---QLIDEYGFGLAIDDF-GVGHSSISN 559
Query: 98 TEA 100
A
Sbjct: 560 LMA 562
>gi|298383803|ref|ZP_06993364.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. 1_1_14]
gi|298263407|gb|EFI06270.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. 1_1_14]
Length = 467
Score = 41.2 bits (95), Expect = 0.13, Method: Composition-based stats.
Identities = 20/68 (29%), Positives = 37/68 (54%), Gaps = 3/68 (4%)
Query: 83 SIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFLE 142
+++DFG DG ++ A +A+ + +GG + +P G + S L SN L+LE
Sbjct: 23 NVRDFGAKADGKAIDSPAINRAI---EAAAQEGGGTVYLPAGEYACYSIRLKSNIHLYLE 79
Query: 143 RGAVMLGS 150
+GA ++ +
Sbjct: 80 QGARIIAA 87
>gi|255571614|ref|XP_002526753.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223533942|gb|EEF35667.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 818
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 36/75 (48%), Gaps = 3/75 (4%)
Query: 75 LPERKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLT 134
LP + + +S+ DFG G+G +T + + + P G +LT + +L
Sbjct: 34 LPRQTITLSVTDFGATGNGHDYDTVPIQSTI---DACPPTTTCHVKFPPGKYLTATIHLK 90
Query: 135 SNFTLFLERGAVMLG 149
S L +++GA +LG
Sbjct: 91 SKVVLEIQKGATLLG 105
>gi|160892041|ref|ZP_02073044.1| hypothetical protein BACUNI_04501 [Bacteroides uniformis ATCC 8492]
gi|156858519|gb|EDO51950.1| glycosyl hydrolase, family 43 [Bacteroides uniformis ATCC 8492]
Length = 979
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 38/69 (55%), Gaps = 3/69 (4%)
Query: 82 MSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFL 141
++ +G +GDG+T NT A +KA+ GG + + G ++TG+ L S L +
Sbjct: 59 FDVRKYGAIGDGSTLNTTAIQKAI---DACFVAGGGTVRIAGGEYVTGTIELKSGVMLEV 115
Query: 142 ERGAVMLGS 150
+GA +LGS
Sbjct: 116 AKGARLLGS 124
>gi|423213419|ref|ZP_17199948.1| hypothetical protein HMPREF1074_01480 [Bacteroides xylanisolvens
CL03T12C04]
gi|392693879|gb|EIY87109.1| hypothetical protein HMPREF1074_01480 [Bacteroides xylanisolvens
CL03T12C04]
Length = 450
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 35/65 (53%), Gaps = 5/65 (7%)
Query: 88 GGVGDGTTSNTEAFRKAV-RYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFLERGAV 146
G +G T NT+ + R +G GG L P G++LTGS +L SN TL LE GA
Sbjct: 30 GAKANGKTLNTKLINSTIDRLNRG----GGGTLFFPAGIYLTGSIHLKSNITLELEAGAT 85
Query: 147 MLGSQ 151
+L S
Sbjct: 86 LLFSD 90
>gi|196228364|ref|ZP_03127231.1| glycoside hydrolase family 28 [Chthoniobacter flavus Ellin428]
gi|196227767|gb|EDY22270.1| glycoside hydrolase family 28 [Chthoniobacter flavus Ellin428]
Length = 456
Score = 41.2 bits (95), Expect = 0.14, Method: Composition-based stats.
Identities = 23/65 (35%), Positives = 34/65 (52%), Gaps = 5/65 (7%)
Query: 83 SIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFLE 142
SI DFG + + TEA KA+ GG ++ +P G+WLTG+ +L N L L
Sbjct: 50 SITDFGASPNADS--TEAIAKAITACHA---AGGGRVTIPAGVWLTGAVHLLGNVDLHLA 104
Query: 143 RGAVM 147
+ A +
Sbjct: 105 KEATL 109
>gi|399028719|ref|ZP_10729875.1| endopolygalacturonase [Flavobacterium sp. CF136]
gi|398073555|gb|EJL64725.1| endopolygalacturonase [Flavobacterium sp. CF136]
Length = 479
Score = 41.2 bits (95), Expect = 0.14, Method: Composition-based stats.
Identities = 25/68 (36%), Positives = 38/68 (55%), Gaps = 5/68 (7%)
Query: 84 IKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGL-WLTGSFNLTSNFTLFLE 142
+K +G GDG T++ A +KA+ K G Q+ +P +L+G FN+ SN L +E
Sbjct: 26 VKKYGAKGDGKTNDAIAIQKAIDACS----KTGGQVLIPAPFTFLSGPFNVKSNVDLHIE 81
Query: 143 RGAVMLGS 150
GA +L S
Sbjct: 82 GGAKILAS 89
>gi|383644708|ref|ZP_09957114.1| polygalacturonase [Sphingomonas elodea ATCC 31461]
Length = 508
Score = 41.2 bits (95), Expect = 0.14, Method: Composition-based stats.
Identities = 21/69 (30%), Positives = 38/69 (55%), Gaps = 3/69 (4%)
Query: 82 MSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFL 141
+ ++ FG GDG ++ A +A+ + +GG + +P G + + S L S+ TL L
Sbjct: 18 VDVRAFGARGDGKALDSPAINRAIEHAAA---RGGGTVWLPAGTYRSYSIRLKSHITLHL 74
Query: 142 ERGAVMLGS 150
+ GAV+L +
Sbjct: 75 DSGAVLLAA 83
>gi|448581455|ref|ZP_21645326.1| polygalacturonase [Haloferax gibbonsii ATCC 33959]
gi|445733703|gb|ELZ85269.1| polygalacturonase [Haloferax gibbonsii ATCC 33959]
Length = 529
Score = 41.2 bits (95), Expect = 0.15, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 30/50 (60%), Gaps = 3/50 (6%)
Query: 98 TEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFLERGAVM 147
TEAF+ A+ + GG + VP G + G+ +L SN TL+LE GAV+
Sbjct: 13 TEAFQTAI---DDCSESGGGTVTVPSGTYTVGTVHLRSNVTLYLEAGAVV 59
>gi|448567354|ref|ZP_21637442.1| polygalacturonase [Haloferax prahovense DSM 18310]
gi|445712249|gb|ELZ64032.1| polygalacturonase [Haloferax prahovense DSM 18310]
Length = 529
Score = 41.2 bits (95), Expect = 0.15, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 30/50 (60%), Gaps = 3/50 (6%)
Query: 98 TEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFLERGAVM 147
TEAF+ A+ + GG + VP G + G+ +L SN TL+LE GAV+
Sbjct: 13 TEAFQTAI---DDCSESGGGTVTVPSGTYTVGTVHLRSNVTLYLEAGAVV 59
>gi|325298611|ref|YP_004258528.1| glycoside hydrolase family protein [Bacteroides salanitronis DSM
18170]
gi|324318164|gb|ADY36055.1| glycoside hydrolase family 28 [Bacteroides salanitronis DSM 18170]
Length = 484
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 47/90 (52%), Gaps = 4/90 (4%)
Query: 62 PDSCAAGLLGDQYLPERKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNV 121
PD A +G + PE +V + +DFG D T +TEA ++AV GG + +
Sbjct: 32 PDLSWAEGVGARTFPEGRV-FNAEDFGLEQDTTKLSTEAIQRAV---DACSRAGGGIVAI 87
Query: 122 PEGLWLTGSFNLTSNFTLFLERGAVMLGSQ 151
+G + TG+ + L LE+GAV++ S+
Sbjct: 88 KKGYYRTGALFIKGGVNLRLEKGAVLIASE 117
>gi|300770985|ref|ZP_07080862.1| exo-poly-alpha-D-galacturonosidase [Sphingobacterium spiritivorum
ATCC 33861]
gi|300762258|gb|EFK59077.1| exo-poly-alpha-D-galacturonosidase [Sphingobacterium spiritivorum
ATCC 33861]
Length = 481
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 38/73 (52%), Gaps = 3/73 (4%)
Query: 79 KVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFT 138
K + DFG DG T +T+A ++A+ KGG ++ G +LTGS + S
Sbjct: 50 KAVVYANDFGAREDGKTISTKAIQQAI---DACAKKGGGKVQFRPGKYLTGSVFIKSGVF 106
Query: 139 LFLERGAVMLGSQ 151
L ++ G +LGSQ
Sbjct: 107 LHVDEGVELLGSQ 119
>gi|398868856|ref|ZP_10624247.1| endopolygalacturonase [Pseudomonas sp. GM78]
gi|398232390|gb|EJN18358.1| endopolygalacturonase [Pseudomonas sp. GM78]
Length = 607
Score = 41.2 bits (95), Expect = 0.15, Method: Composition-based stats.
Identities = 22/68 (32%), Positives = 39/68 (57%), Gaps = 5/68 (7%)
Query: 84 IKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFLER 143
+++ G GDG+T +T A ++A+ G ++ +P G + +G+ L SN TL +
Sbjct: 158 VREQGAKGDGSTLDTAAIQRAIDACTP-----GCKVLLPAGTYKSGALYLKSNMTLEIAE 212
Query: 144 GAVMLGSQ 151
GA +LGS+
Sbjct: 213 GATLLGSE 220
>gi|259047630|ref|ZP_05738031.1| cell wall surface anchor family protein [Granulicatella adiacens
ATCC 49175]
gi|259035821|gb|EEW37076.1| cell wall surface anchor family protein [Granulicatella adiacens
ATCC 49175]
Length = 705
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 44/89 (49%), Gaps = 8/89 (8%)
Query: 63 DSCAAGLLGDQYLPERKVAMSIKDFGGVGDGTTSNTEAFRKAVRYM-QGFGDKGGAQLNV 121
+ A G+ DQ + +++KDFG VGDG T + +A + A+ QG GG +L
Sbjct: 133 ERSANGVEADQPTTD---TLNVKDFGAVGDGVTDDHDAMQAAIDAASQGL---GGGKLYF 186
Query: 122 PEGLWLTGSF-NLTSNFTLFLERGAVMLG 149
P+G +L L SN + L A ++
Sbjct: 187 PQGTYLVKKMVQLKSNIDIRLHDDATIVN 215
>gi|383115308|ref|ZP_09936066.1| hypothetical protein BSGG_2810 [Bacteroides sp. D2]
gi|313695275|gb|EFS32110.1| hypothetical protein BSGG_2810 [Bacteroides sp. D2]
Length = 496
Score = 41.2 bits (95), Expect = 0.15, Method: Composition-based stats.
Identities = 31/104 (29%), Positives = 49/104 (47%), Gaps = 16/104 (15%)
Query: 47 PKRVGFSGADGAIFDPDSCAAGLLGDQYLPERKVAMSIKDFGGVGDGTTSNTEAFRKAVR 106
P++V S AD +G + P+ ++ +S FG V D T +TEA +KA+
Sbjct: 35 PQQVDLSWADS------------VGSRQQPDGRI-ISANSFGAVADSTRLSTEAIQKAID 81
Query: 107 YMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFLERGAVMLGS 150
G GG + P G +L G+ + S L L++G +L S
Sbjct: 82 ECSAAG--GGTVILAP-GYYLVGALFIKSGVNLQLDKGVTLLAS 122
>gi|345299336|ref|YP_004828694.1| glycoside hydrolase family protein [Enterobacter asburiae LF7a]
gi|345093273|gb|AEN64909.1| glycoside hydrolase family 28 [Enterobacter asburiae LF7a]
Length = 430
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 39/77 (50%), Gaps = 9/77 (11%)
Query: 75 LPERKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLT 134
+ ER V DFG G +T A ++A+ G D L +P G +LTGS L
Sbjct: 1 MTERNVC----DFGADPSGRQVSTAAIQRAI-AKTGHNDT----LVIPAGRFLTGSLFLK 51
Query: 135 SNFTLFLERGAVMLGSQ 151
S TL LE GA +LGSQ
Sbjct: 52 SGMTLHLEAGAQLLGSQ 68
>gi|189464497|ref|ZP_03013282.1| hypothetical protein BACINT_00839 [Bacteroides intestinalis DSM
17393]
gi|189438287|gb|EDV07272.1| polygalacturonase (pectinase) [Bacteroides intestinalis DSM 17393]
Length = 492
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 37/72 (51%), Gaps = 7/72 (9%)
Query: 80 VAMS----IKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTS 135
VAMS +K G G S TE R ++ +GG + P G +LT + ++ S
Sbjct: 16 VAMSRTFDMKQLGADAKGIKSCTELIN---RTIEKAASEGGGTIYFPVGTYLTATIHMKS 72
Query: 136 NFTLFLERGAVM 147
N TL+LE GAV+
Sbjct: 73 NITLYLESGAVL 84
>gi|427384862|ref|ZP_18881367.1| hypothetical protein HMPREF9447_02400 [Bacteroides oleiciplenus YIT
12058]
gi|425728123|gb|EKU90982.1| hypothetical protein HMPREF9447_02400 [Bacteroides oleiciplenus YIT
12058]
Length = 525
Score = 41.2 bits (95), Expect = 0.16, Method: Composition-based stats.
Identities = 20/68 (29%), Positives = 36/68 (52%), Gaps = 3/68 (4%)
Query: 83 SIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFLE 142
++ D+G + S T + +K + GG + +P G +++G+ L +N FL+
Sbjct: 27 NVADYGVKANSGKSETASLQKIIDLCS---TNGGGTVCIPTGTYISGTLFLKNNVMFFLD 83
Query: 143 RGAVMLGS 150
RGAV+ GS
Sbjct: 84 RGAVLRGS 91
>gi|189464040|ref|ZP_03012825.1| hypothetical protein BACINT_00375 [Bacteroides intestinalis DSM
17393]
gi|189438613|gb|EDV07598.1| polygalacturonase (pectinase) [Bacteroides intestinalis DSM 17393]
Length = 532
Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 41/89 (46%), Gaps = 3/89 (3%)
Query: 62 PDSCAAGLLGDQYLPERKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNV 121
PD +G + LP+ +S FG V D T +T+A +KA+ GG + +
Sbjct: 64 PDFSWTENVGSRQLPDSSTVVSANSFGAVADSTVLSTDAIQKAI---DSCALSGGGTVTL 120
Query: 122 PEGLWLTGSFNLTSNFTLFLERGAVMLGS 150
G +LTG+ + S L + +G ++
Sbjct: 121 QPGYYLTGALFVKSGVNLQISKGVTLIAC 149
>gi|325105247|ref|YP_004274901.1| glycoside hydrolase family protein [Pedobacter saltans DSM 12145]
gi|324974095|gb|ADY53079.1| glycoside hydrolase family 28 [Pedobacter saltans DSM 12145]
Length = 456
Score = 41.2 bits (95), Expect = 0.16, Method: Composition-based stats.
Identities = 22/73 (30%), Positives = 43/73 (58%), Gaps = 4/73 (5%)
Query: 79 KVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLW-LTGSFNLTSNF 137
K + I DFG VGD + + AF K ++ + ++ GA++ VP G++ L G ++ N
Sbjct: 49 KNKLIITDFGAVGDSLSDSKPAFDKVIQICK---EQNGARIIVPPGVYLLRGPIHMVDNM 105
Query: 138 TLFLERGAVMLGS 150
++ +++GA ++ S
Sbjct: 106 SIDIQKGAKLIFS 118
>gi|325298060|ref|YP_004257977.1| glycoside hydrolase family protein [Bacteroides salanitronis DSM
18170]
gi|324317613|gb|ADY35504.1| glycoside hydrolase family 28 [Bacteroides salanitronis DSM 18170]
Length = 462
Score = 40.8 bits (94), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 44/93 (47%), Gaps = 7/93 (7%)
Query: 56 DGAIFDPDSCAAGLLGDQYLPERKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKG 115
D I DS A + G +PE++ I FG GDG AF KA M+ G
Sbjct: 25 DMRIMKRDSILAQITGAT-IPEKE--WLITSFGAKGDGKKDCKPAFDKA---MKRAAKSG 78
Query: 116 GAQLNVPEGLW-LTGSFNLTSNFTLFLERGAVM 147
GA + VP G + L G + SN L L+ GAV+
Sbjct: 79 GAHIVVPAGEYKLNGPIHFVSNVCLELQEGAVL 111
>gi|375144674|ref|YP_005007115.1| glycoside hydrolase family protein [Niastella koreensis GR20-10]
gi|361058720|gb|AEV97711.1| glycoside hydrolase family 28 [Niastella koreensis GR20-10]
Length = 433
Score = 40.8 bits (94), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 38/68 (55%), Gaps = 3/68 (4%)
Query: 83 SIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFLE 142
+I + G GDG T NT+ + + G KGG + +P+G++++G+ L L L+
Sbjct: 32 NIAEQGAQGDGKTLNTQKIQLVI---DGCAQKGGGTVVIPKGVFVSGALFLKRGVNLELQ 88
Query: 143 RGAVMLGS 150
GAV+ GS
Sbjct: 89 EGAVLKGS 96
>gi|325300092|ref|YP_004260009.1| glycoside hydrolase family protein [Bacteroides salanitronis DSM
18170]
gi|324319645|gb|ADY37536.1| glycoside hydrolase family 28 [Bacteroides salanitronis DSM 18170]
Length = 444
Score = 40.8 bits (94), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 34/70 (48%), Gaps = 3/70 (4%)
Query: 81 AMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLF 140
A I D+G V D T TE + + GG + +P+G +L+GS N L+
Sbjct: 51 AYRITDYGVVNDSTVIQTERIQAVI---DKASQAGGGVVYIPQGTYLSGSLFFKPNTHLY 107
Query: 141 LERGAVMLGS 150
+E+G + GS
Sbjct: 108 IEKGGTLKGS 117
>gi|423394549|ref|ZP_17371750.1| hypothetical protein ICU_00243 [Bacillus cereus BAG2X1-1]
gi|401657748|gb|EJS75255.1| hypothetical protein ICU_00243 [Bacillus cereus BAG2X1-1]
Length = 372
Score = 40.8 bits (94), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 32/50 (64%), Gaps = 3/50 (6%)
Query: 81 AMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGS 130
++S+KDFG G+G +++ A + A+RY++ KGG L P+G +L S
Sbjct: 44 SISVKDFGAEGNGKINDSPAIQDAIRYLE---QKGGGVLYFPKGNYLINS 90
>gi|371776320|ref|ZP_09482642.1| glycoside hydrolase family protein [Anaerophaga sp. HS1]
Length = 463
Score = 40.8 bits (94), Expect = 0.18, Method: Composition-based stats.
Identities = 24/65 (36%), Positives = 34/65 (52%), Gaps = 3/65 (4%)
Query: 83 SIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFLE 142
SI DFG V S T+A +A+ D GG ++ +P G W +G +L SN L L
Sbjct: 61 SITDFGAVEKEKISTTKAISQAIAAAS---DAGGGRVIIPAGEWFSGKIHLKSNVNLHLS 117
Query: 143 RGAVM 147
GA++
Sbjct: 118 EGAIL 122
>gi|392956456|ref|ZP_10321983.1| hypothetical protein A374_06916 [Bacillus macauensis ZFHKF-1]
gi|391877438|gb|EIT86031.1| hypothetical protein A374_06916 [Bacillus macauensis ZFHKF-1]
Length = 532
Score = 40.8 bits (94), Expect = 0.18, Method: Composition-based stats.
Identities = 18/54 (33%), Positives = 33/54 (61%), Gaps = 7/54 (12%)
Query: 82 MSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTS 135
++++D+G VGDG T +T AF++A+ +G + VP+G+++T L S
Sbjct: 93 VNVRDYGAVGDGKTDDTLAFQRAI-------GRGNVSVYVPQGVYITKGVRLPS 139
>gi|260584885|ref|ZP_05852630.1| cell wall surface anchor protein [Granulicatella elegans ATCC
700633]
gi|260157542|gb|EEW92613.1| cell wall surface anchor protein [Granulicatella elegans ATCC
700633]
Length = 715
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 39/70 (55%), Gaps = 5/70 (7%)
Query: 82 MSIKDFGGVGDGTTSNTEAFRKAVR-YMQGFGDKGGAQLNVPEGLWLTGS-FNLTSNFTL 139
+++K+FG VGDG T + EA +KA+ +G GG +L PEG +L L SN +
Sbjct: 83 INVKEFGAVGDGITDDQEAIQKAIDAATKGL---GGGKLYFPEGTYLVKKIIQLKSNIDI 139
Query: 140 FLERGAVMLG 149
L+ A +L
Sbjct: 140 RLDDKATILN 149
>gi|116620373|ref|YP_822529.1| glycoside hydrolase family protein [Candidatus Solibacter usitatus
Ellin6076]
gi|116223535|gb|ABJ82244.1| glycoside hydrolase, family 28 [Candidatus Solibacter usitatus
Ellin6076]
Length = 446
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 41/87 (47%), Gaps = 3/87 (3%)
Query: 64 SCAAGLLGDQYLPERKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPE 123
+C L+G +K FG GDG +T A +A+ GG + V
Sbjct: 4 TCRVALVGLLAACAWSAEFDVKTFGAAGDGKKKDTAAIARAIDAAA---KAGGGTVVVSP 60
Query: 124 GLWLTGSFNLTSNFTLFLERGAVMLGS 150
G +LTG+ L SN TL +E GA +LGS
Sbjct: 61 GRYLTGALTLKSNVTLDVEAGATLLGS 87
>gi|423301865|ref|ZP_17279888.1| hypothetical protein HMPREF1057_03029 [Bacteroides finegoldii
CL09T03C10]
gi|408470956|gb|EKJ89488.1| hypothetical protein HMPREF1057_03029 [Bacteroides finegoldii
CL09T03C10]
Length = 505
Score = 40.8 bits (94), Expect = 0.19, Method: Composition-based stats.
Identities = 24/89 (26%), Positives = 39/89 (43%), Gaps = 3/89 (3%)
Query: 62 PDSCAAGLLGDQYLPERKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNV 121
PD +G + P + +S G V D T +T A +KA+ GG + +
Sbjct: 38 PDLSWVDSVGSRQEPINHITLSANSLGAVADSTVLSTTAIQKAI---DSCAVSGGGTVTL 94
Query: 122 PEGLWLTGSFNLTSNFTLFLERGAVMLGS 150
G + TG+ + S L L++G +L S
Sbjct: 95 QPGYYQTGALFIKSGVNLHLDKGVTLLAS 123
>gi|402085436|gb|EJT80334.1| hypothetical protein GGTG_00335 [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 1634
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 34/61 (55%), Gaps = 6/61 (9%)
Query: 76 PERKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGD------KGGAQLNVPEGLWLTG 129
P+ KV ++KD+G GDG T +T+A R+A+ + GD K GA + P G +L
Sbjct: 192 PDFKVFRNVKDYGAKGDGVTDDTKAIRRAIEDGKMCGDGCYSSTKHGAIIYFPSGTYLVS 251
Query: 130 S 130
S
Sbjct: 252 S 252
>gi|326488053|dbj|BAJ89865.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326525659|dbj|BAJ88876.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 464
Score = 40.8 bits (94), Expect = 0.19, Method: Composition-based stats.
Identities = 26/67 (38%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Query: 83 SIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFLE 142
S+ D+G GDGT +T A + AV G G GG L G +LT + +L S L +
Sbjct: 36 SVADYGAAGDGTRYDTAAIQAAVDACAGAG--GGRVLLPAPGDYLTATVHLRSRVVLEVA 93
Query: 143 RGAVMLG 149
GA +LG
Sbjct: 94 PGARLLG 100
>gi|418470267|ref|ZP_13040500.1| glycoside hydrolase family 28, partial [Streptomyces coelicoflavus
ZG0656]
gi|371549131|gb|EHN77044.1| glycoside hydrolase family 28, partial [Streptomyces coelicoflavus
ZG0656]
Length = 115
Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 35/64 (54%), Gaps = 3/64 (4%)
Query: 86 DFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFLERGA 145
DFG VGDG T NT + A+ +GG + + GL+L+GS + S TL + RGA
Sbjct: 39 DFGAVGDGQTINTRPIQAAIDAAA---AEGGGTVVIRPGLYLSGSLFVKSGVTLMIGRGA 95
Query: 146 VMLG 149
+ G
Sbjct: 96 TIRG 99
>gi|229589775|ref|YP_002871894.1| exo-poly-alpha-D-galacturonosidase [Pseudomonas fluorescens SBW25]
gi|229361641|emb|CAY48521.1| exo-poly-alpha-D-galacturonosidase precursor [Pseudomonas
fluorescens SBW25]
Length = 600
Score = 40.8 bits (94), Expect = 0.20, Method: Composition-based stats.
Identities = 30/106 (28%), Positives = 50/106 (47%), Gaps = 8/106 (7%)
Query: 46 SPKRVGFSGADGAIFDPDSCAAGLLGDQYLPERKVAMSIKDFGGVGDGTTSNTEAFRKAV 105
+P R D + + AA L +P V +K +G GDG +T A ++A+
Sbjct: 118 TPYRFTVRSVDSSGKESADSAAVLQRTTPVP---VVFDVKHYGAKGDGIHLDTLAIQRAI 174
Query: 106 RYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFLERGAVMLGSQ 151
G ++ +P+G + +G+ L SN TL + GA +LGS+
Sbjct: 175 DACTV-----GGKVLLPKGTYKSGALYLKSNMTLEIADGATLLGSE 215
>gi|329962021|ref|ZP_08300032.1| polygalacturonase [Bacteroides fluxus YIT 12057]
gi|328530669|gb|EGF57527.1| polygalacturonase [Bacteroides fluxus YIT 12057]
Length = 477
Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 38/70 (54%), Gaps = 3/70 (4%)
Query: 82 MSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFL 141
++I ++ DG T T +KA+ GG +++P G +LTG+ L N TL L
Sbjct: 30 VAIDEYEIYADGKTITTRGLQKAI---DDCSKNGGGIVSLPAGEYLTGTIVLKKNVTLKL 86
Query: 142 ERGAVMLGSQ 151
E G+ ++GS+
Sbjct: 87 EEGSKIIGSR 96
>gi|374374281|ref|ZP_09631940.1| glycoside hydrolase family 28 [Niabella soli DSM 19437]
gi|373233723|gb|EHP53517.1| glycoside hydrolase family 28 [Niabella soli DSM 19437]
Length = 465
Score = 40.8 bits (94), Expect = 0.20, Method: Composition-based stats.
Identities = 18/36 (50%), Positives = 24/36 (66%)
Query: 115 GGAQLNVPEGLWLTGSFNLTSNFTLFLERGAVMLGS 150
GG + +P+G WLTG +L SN L LE+GA +L S
Sbjct: 93 GGGIVVIPKGEWLTGKIHLKSNVNLHLEKGATLLFS 128
>gi|315650888|ref|ZP_07903931.1| pectin lyase [Lachnoanaerobaculum saburreum DSM 3986]
gi|315486867|gb|EFU77206.1| pectin lyase [Lachnoanaerobaculum saburreum DSM 3986]
Length = 360
Score = 40.8 bits (94), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 38/72 (52%), Gaps = 5/72 (6%)
Query: 80 VAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTL 139
V +++KDFG GDG ++ + AV G + +P+G +L L SN L
Sbjct: 81 VLLNVKDFGAAGDGVKIDSVCIQAAVNACPKDG-----TVYIPKGRYLCTPVFLKSNIDL 135
Query: 140 FLERGAVMLGSQ 151
++++ AV++G +
Sbjct: 136 WIDKDAVLIGEK 147
>gi|325681266|ref|ZP_08160796.1| dockerin type I repeat protein [Ruminococcus albus 8]
gi|324107188|gb|EGC01474.1| dockerin type I repeat protein [Ruminococcus albus 8]
Length = 868
Score = 40.4 bits (93), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 39/66 (59%), Gaps = 2/66 (3%)
Query: 84 IKDFGGVGDGTTSNTEAFRKAVRYMQ-GFGDKGGAQLNVPEGLW-LTGSFNLTSNFTLFL 141
+ DFG G+ S T A + A+RY + DK ++ +P+G + +T S + SN L++
Sbjct: 62 VTDFGADNTGSVSATAAIQNALRYARDNASDKIQVKIVIPKGTYSMTKSLIIGSNTHLYM 121
Query: 142 ERGAVM 147
E+GAV+
Sbjct: 122 EKGAVI 127
>gi|392950256|ref|ZP_10315813.1| endopolygalacturonase, glycosyl hydrolases family 28 [Lactobacillus
pentosus KCA1]
gi|392434538|gb|EIW12505.1| endopolygalacturonase, glycosyl hydrolases family 28 [Lactobacillus
pentosus KCA1]
Length = 427
Score = 40.4 bits (93), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 19/35 (54%), Positives = 25/35 (71%)
Query: 113 DKGGAQLNVPEGLWLTGSFNLTSNFTLFLERGAVM 147
+ GG QLN+ G++ GS L S+FTLFLE GAV+
Sbjct: 33 EAGGGQLNLTAGVYEVGSLELGSDFTLFLEAGAVL 67
>gi|332666314|ref|YP_004449102.1| polygalacturonase [Haliscomenobacter hydrossis DSM 1100]
gi|332335128|gb|AEE52229.1| Polygalacturonase [Haliscomenobacter hydrossis DSM 1100]
Length = 778
Score = 40.4 bits (93), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 36/70 (51%), Gaps = 3/70 (4%)
Query: 78 RKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNF 137
RK SI +G DG T +T A +AV + GG + VP G WLTG L SN
Sbjct: 266 RKDTFSIVRYGAKSDGITLSTPAINQAVNLAH---EAGGGVVVVPSGFWLTGPIVLKSNV 322
Query: 138 TLFLERGAVM 147
L + +GA++
Sbjct: 323 NLHISQGALL 332
>gi|380693880|ref|ZP_09858739.1| exopolygalacturonase [Bacteroides faecis MAJ27]
Length = 432
Score = 40.4 bits (93), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 35/68 (51%), Gaps = 3/68 (4%)
Query: 83 SIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFLE 142
SI +G V D T T+ ++ + GG + VP+G +L+GS +N L+LE
Sbjct: 48 SITSYGVVNDSTVVQTKKIQEVIDLA---AQNGGGVIVVPQGTFLSGSLFFKNNTHLYLE 104
Query: 143 RGAVMLGS 150
AV+ GS
Sbjct: 105 ENAVLKGS 112
>gi|355673331|ref|ZP_09058928.1| hypothetical protein HMPREF9469_01965 [Clostridium citroniae
WAL-17108]
gi|354814797|gb|EHE99396.1| hypothetical protein HMPREF9469_01965 [Clostridium citroniae
WAL-17108]
Length = 532
Score = 40.4 bits (93), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 53/119 (44%), Gaps = 10/119 (8%)
Query: 30 TLITIFSLEITKKSVLSPKRVGFSGADGAIFDPDSCA-AGLLGDQYLPERKVAMSIKDFG 88
T+ +++ LE + +R F A D CA AG D+ V ++++DFG
Sbjct: 44 TITSLYDLEPETFYKVEIRRAAFGDRADAQEDTAFCAEAGFTTDREF----VTLNVRDFG 99
Query: 89 GVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFLERGAVM 147
GDG +T + AV +++ VP G + S L N + LE+GAV+
Sbjct: 100 AKGDGIQDDTLFIQSAV-----MACPKDSRVLVPAGTYRIVSLFLKDNVKIELEKGAVL 153
>gi|227114087|ref|ZP_03827743.1| putative polygalacturonase [Pectobacterium carotovorum subsp.
brasiliensis PBR1692]
Length = 444
Score = 40.4 bits (93), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 37/68 (54%), Gaps = 3/68 (4%)
Query: 83 SIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFLE 142
SI+ + DG T +T F++A+ + +GG L V G +L G L SNF L LE
Sbjct: 4 SIQSYSPAADGITPDTAIFQQAIDRIAA---QGGGTLTVEPGRYLLGGLLLPSNFCLQLE 60
Query: 143 RGAVMLGS 150
GAV++ S
Sbjct: 61 AGAVLIVS 68
>gi|336415217|ref|ZP_08595558.1| hypothetical protein HMPREF1017_02666 [Bacteroides ovatus
3_8_47FAA]
gi|335941250|gb|EGN03108.1| hypothetical protein HMPREF1017_02666 [Bacteroides ovatus
3_8_47FAA]
Length = 513
Score = 40.4 bits (93), Expect = 0.26, Method: Composition-based stats.
Identities = 20/65 (30%), Positives = 36/65 (55%), Gaps = 3/65 (4%)
Query: 83 SIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFLE 142
++K+ G G S TE + + + +GG + P G++LT + ++ SN TL++E
Sbjct: 23 NMKELGADPRGIESCTELINQTI---EKASSEGGGTIYFPAGVYLTATIHMKSNITLYVE 79
Query: 143 RGAVM 147
GAV+
Sbjct: 80 SGAVL 84
>gi|255692376|ref|ZP_05416051.1| putative exo-poly-alpha-D-galacturonosidase [Bacteroides finegoldii
DSM 17565]
gi|260621842|gb|EEX44713.1| polygalacturonase (pectinase) [Bacteroides finegoldii DSM 17565]
Length = 513
Score = 40.4 bits (93), Expect = 0.26, Method: Composition-based stats.
Identities = 20/65 (30%), Positives = 36/65 (55%), Gaps = 3/65 (4%)
Query: 83 SIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFLE 142
++K+ G G S TE + + + +GG + P G++LT + ++ SN TL++E
Sbjct: 23 NMKELGADPRGIESCTELINQTI---EKASSEGGGTIYFPAGVYLTATIHMKSNITLYVE 79
Query: 143 RGAVM 147
GAV+
Sbjct: 80 SGAVL 84
>gi|160885582|ref|ZP_02066585.1| hypothetical protein BACOVA_03584 [Bacteroides ovatus ATCC 8483]
gi|299147452|ref|ZP_07040517.1| polygalacturonase (Pectinase) [Bacteroides sp. 3_1_23]
gi|423290253|ref|ZP_17269102.1| hypothetical protein HMPREF1069_04145 [Bacteroides ovatus
CL02T12C04]
gi|423294451|ref|ZP_17272578.1| hypothetical protein HMPREF1070_01243 [Bacteroides ovatus
CL03T12C18]
gi|156109204|gb|EDO10949.1| polygalacturonase (pectinase) [Bacteroides ovatus ATCC 8483]
gi|298514730|gb|EFI38614.1| polygalacturonase (Pectinase) [Bacteroides sp. 3_1_23]
gi|392665640|gb|EIY59163.1| hypothetical protein HMPREF1069_04145 [Bacteroides ovatus
CL02T12C04]
gi|392675642|gb|EIY69083.1| hypothetical protein HMPREF1070_01243 [Bacteroides ovatus
CL03T12C18]
Length = 513
Score = 40.4 bits (93), Expect = 0.26, Method: Composition-based stats.
Identities = 20/65 (30%), Positives = 36/65 (55%), Gaps = 3/65 (4%)
Query: 83 SIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFLE 142
++K+ G G S TE + + + +GG + P G++LT + ++ SN TL++E
Sbjct: 23 NMKELGADPRGIESCTELINQTI---EKASSEGGGTIYFPAGVYLTATIHMKSNITLYVE 79
Query: 143 RGAVM 147
GAV+
Sbjct: 80 SGAVL 84
>gi|393787227|ref|ZP_10375359.1| hypothetical protein HMPREF1068_01639 [Bacteroides nordii
CL02T12C05]
gi|392658462|gb|EIY52092.1| hypothetical protein HMPREF1068_01639 [Bacteroides nordii
CL02T12C05]
Length = 513
Score = 40.4 bits (93), Expect = 0.26, Method: Composition-based stats.
Identities = 28/72 (38%), Positives = 36/72 (50%), Gaps = 12/72 (16%)
Query: 82 MSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDK----GGAQLNVPEGLWLTGSFNLTSNF 137
MSI DFG + N+ A + A+ DK GG + VP G +LT + L SN
Sbjct: 22 MSILDFGA-KQNSRDNSAAIQAAI-------DKCALSGGGTVYVPAGTYLTTTIFLKSNV 73
Query: 138 TLFLERGAVMLG 149
LFL GAV+ G
Sbjct: 74 HLFLHNGAVLQG 85
>gi|189467634|ref|ZP_03016419.1| hypothetical protein BACINT_04024 [Bacteroides intestinalis DSM
17393]
gi|189435898|gb|EDV04883.1| polygalacturonase (pectinase) [Bacteroides intestinalis DSM 17393]
Length = 436
Score = 40.4 bits (93), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 38/82 (46%), Gaps = 11/82 (13%)
Query: 70 LGDQYLPERKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTG 129
LGD+Y I D+ V D T TE + + KGG + +P+G +L+G
Sbjct: 47 LGDKY--------KITDYSVVNDSTLIQTEKIQAVIDQASS---KGGGVVIIPKGTYLSG 95
Query: 130 SFNLTSNFTLFLERGAVMLGSQ 151
+ L+LE GAV+ GS
Sbjct: 96 ALFFKPKTHLYLEEGAVLKGSD 117
>gi|329961973|ref|ZP_08299984.1| polygalacturonase [Bacteroides fluxus YIT 12057]
gi|328530621|gb|EGF57479.1| polygalacturonase [Bacteroides fluxus YIT 12057]
Length = 432
Score = 40.0 bits (92), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 34/68 (50%), Gaps = 3/68 (4%)
Query: 84 IKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFLER 143
I D+G V D T TE + + KGG + +P+G +L+GS L+LE
Sbjct: 49 ITDYGAVNDSTLLQTEKIQAVIDLA---SQKGGGVIIIPKGTFLSGSLFFKPRTHLYLEE 105
Query: 144 GAVMLGSQ 151
GA++ GS
Sbjct: 106 GAMLKGSD 113
>gi|421078107|ref|ZP_15539066.1| glycoside hydrolase family 28 [Pelosinus fermentans JBW45]
gi|392523692|gb|EIW46859.1| glycoside hydrolase family 28 [Pelosinus fermentans JBW45]
Length = 908
Score = 40.0 bits (92), Expect = 0.30, Method: Composition-based stats.
Identities = 21/69 (30%), Positives = 39/69 (56%), Gaps = 5/69 (7%)
Query: 83 SIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFLE 142
+I D+G VGDG TSNT+A + A+ G ++ +P G++ TG+ L + T +
Sbjct: 156 NIVDYGAVGDGVTSNTKAIQAAIDAC-----TPGGKVLIPAGIFKTGAIWLKGDMTFEIG 210
Query: 143 RGAVMLGSQ 151
+ + +L ++
Sbjct: 211 KDSTLLATE 219
>gi|300789895|ref|YP_003770186.1| endopolygalacturonase [Amycolatopsis mediterranei U32]
gi|384153411|ref|YP_005536227.1| endopolygalacturonase [Amycolatopsis mediterranei S699]
gi|399541775|ref|YP_006554437.1| endopolygalacturonase [Amycolatopsis mediterranei S699]
gi|299799409|gb|ADJ49784.1| endopolygalacturonase [Amycolatopsis mediterranei U32]
gi|340531565|gb|AEK46770.1| endopolygalacturonase [Amycolatopsis mediterranei S699]
gi|398322545|gb|AFO81492.1| endopolygalacturonase [Amycolatopsis mediterranei S699]
Length = 457
Score = 40.0 bits (92), Expect = 0.31, Method: Composition-based stats.
Identities = 28/74 (37%), Positives = 37/74 (50%), Gaps = 6/74 (8%)
Query: 75 LPERKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEG-LWLTGSFNL 133
P+R+ I +G DG T NT A KA+ GG + VP G +LTG+ L
Sbjct: 55 FPDRR--FPITGYGAKNDGKTDNTAAIAKAIDACVA---AGGGHVIVPGGGSFLTGAIRL 109
Query: 134 TSNFTLFLERGAVM 147
SN L LE G+V+
Sbjct: 110 KSNVDLHLEAGSVL 123
>gi|339022449|ref|ZP_08646391.1| glycoside hydrolase family 28 [Acetobacter tropicalis NBRC 101654]
gi|338750533|dbj|GAA09695.1| glycoside hydrolase family 28 [Acetobacter tropicalis NBRC 101654]
Length = 438
Score = 40.0 bits (92), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 37/64 (57%), Gaps = 3/64 (4%)
Query: 87 FGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFLERGAV 146
+G DG T++ A ++A+ + GG +++ G WL+G +L ++ TL L +G+
Sbjct: 17 YGARHDGRTNDGPAIQRAI---TACSEAGGGMVSLTSGTWLSGPLSLKNHVTLNLGQGST 73
Query: 147 MLGS 150
+LGS
Sbjct: 74 LLGS 77
>gi|17473561|gb|AAL38256.1| putative protein [Arabidopsis thaliana]
gi|28059069|gb|AAO29984.1| putative protein [Arabidopsis thaliana]
Length = 325
Score = 40.0 bits (92), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 37/79 (46%), Gaps = 6/79 (7%)
Query: 75 LPERKVAMSIKDFGGVGDGTTSNTEAFRKAV----RYMQGFGDKGGAQLNVPEGLWLTGS 130
LP + +S+ DFG GDG +T A + + R+ F ++ P G +LT
Sbjct: 28 LPGDSLTLSVTDFGATGDGINYDTSAIQSTIDACNRHYTSFSSI--CRVVFPSGNYLTAK 85
Query: 131 FNLTSNFTLFLERGAVMLG 149
+L S L + AV+LG
Sbjct: 86 LHLRSGVILDVTENAVLLG 104
>gi|325103545|ref|YP_004273199.1| glycoside hydrolase family protein [Pedobacter saltans DSM 12145]
gi|324972393|gb|ADY51377.1| glycoside hydrolase family 28 [Pedobacter saltans DSM 12145]
Length = 537
Score = 40.0 bits (92), Expect = 0.33, Method: Composition-based stats.
Identities = 28/81 (34%), Positives = 43/81 (53%), Gaps = 10/81 (12%)
Query: 70 LGDQYLPERKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTG 129
LGDQ + ++KD+ G T+ +KA+ Y+ KG L VP G +LTG
Sbjct: 135 LGDQNV------TNLKDYVDDHTGQVLQTKQIQKAIDYVSA--HKG--ILYVPNGKYLTG 184
Query: 130 SFNLTSNFTLFLERGAVMLGS 150
+ + + TL+LE GA++ GS
Sbjct: 185 TLIMKRDVTLYLESGAIIQGS 205
>gi|24417492|gb|AAN60356.1| unknown [Arabidopsis thaliana]
Length = 192
Score = 40.0 bits (92), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 37/79 (46%), Gaps = 6/79 (7%)
Query: 75 LPERKVAMSIKDFGGVGDGTTSNTEAFRKAV----RYMQGFGDKGGAQLNVPEGLWLTGS 130
LP + +S+ DFG GDG +T A + + R+ F ++ P G +LT
Sbjct: 27 LPGDSLTLSVTDFGATGDGINYDTSAIQSTIDACNRHYTSFSSI--CRVVFPSGNYLTAK 84
Query: 131 FNLTSNFTLFLERGAVMLG 149
+L S L + AV+LG
Sbjct: 85 LHLRSGVILDVTENAVLLG 103
>gi|393781526|ref|ZP_10369720.1| hypothetical protein HMPREF1071_00588 [Bacteroides salyersiae
CL02T12C01]
gi|392676130|gb|EIY69568.1| hypothetical protein HMPREF1071_00588 [Bacteroides salyersiae
CL02T12C01]
Length = 447
Score = 40.0 bits (92), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 30/64 (46%), Gaps = 3/64 (4%)
Query: 88 GGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFLERGAVM 147
G DG T NT V + GG L P G +LTG+ L SN TL LE GA +
Sbjct: 31 GAKADGKTLNTTLINHTVDRLS---QAGGGTLFFPAGTYLTGAIRLKSNITLELEAGATL 87
Query: 148 LGSQ 151
L S
Sbjct: 88 LFSD 91
>gi|423298602|ref|ZP_17276658.1| hypothetical protein HMPREF1070_05323 [Bacteroides ovatus
CL03T12C18]
gi|392662345|gb|EIY55906.1| hypothetical protein HMPREF1070_05323 [Bacteroides ovatus
CL03T12C18]
Length = 446
Score = 40.0 bits (92), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 34/65 (52%), Gaps = 5/65 (7%)
Query: 88 GGVGDGTTSNTEAFRKAV-RYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFLERGAV 146
G +G T NT+ + R +G GG L P G +LTGS +L SN TL LE GA
Sbjct: 30 GAKANGKTLNTKLINSTIDRLNRG----GGGTLFFPAGTYLTGSIHLKSNITLELEAGAT 85
Query: 147 MLGSQ 151
+L S
Sbjct: 86 LLFSD 90
>gi|298481339|ref|ZP_06999532.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. D22]
gi|298272543|gb|EFI14111.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. D22]
Length = 464
Score = 40.0 bits (92), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 34/64 (53%), Gaps = 5/64 (7%)
Query: 88 GGVGDGTTSNTEAFRKAV-RYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFLERGAV 146
G +G T NT+ + R +G GG L P G +LTGS +L SN TL LE GA
Sbjct: 39 GAKANGKTLNTKLINSTIDRLNRG----GGGTLFFPAGTYLTGSIHLKSNITLELEAGAT 94
Query: 147 MLGS 150
+L S
Sbjct: 95 LLFS 98
>gi|336426338|ref|ZP_08606348.1| hypothetical protein HMPREF0994_02354 [Lachnospiraceae bacterium
3_1_57FAA_CT1]
gi|336010773|gb|EGN40753.1| hypothetical protein HMPREF0994_02354 [Lachnospiraceae bacterium
3_1_57FAA_CT1]
Length = 437
Score = 40.0 bits (92), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
Query: 93 GTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFLERGAVMLGS 150
G NT ++ + + + GG + +P G++L+G+ +L N +L+LERGAV+ GS
Sbjct: 2 GARENTLCTKEIQKAVDLIDEAGGGTVIIPSGVYLSGTIHL-KNTSLYLERGAVLKGS 58
>gi|427383479|ref|ZP_18880199.1| hypothetical protein HMPREF9447_01232 [Bacteroides oleiciplenus YIT
12058]
gi|425728663|gb|EKU91518.1| hypothetical protein HMPREF9447_01232 [Bacteroides oleiciplenus YIT
12058]
Length = 432
Score = 40.0 bits (92), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 38/82 (46%), Gaps = 11/82 (13%)
Query: 70 LGDQYLPERKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTG 129
LGD+Y I D+ V D T TE + + KGG + +P+G +L+G
Sbjct: 43 LGDKY--------KITDYSVVNDSTLLQTEKIQAVIDQASS---KGGGVVIIPKGTYLSG 91
Query: 130 SFNLTSNFTLFLERGAVMLGSQ 151
+ L+LE GAV+ GS
Sbjct: 92 ALFFKPKTHLYLEEGAVLKGSD 113
>gi|325106412|ref|YP_004276066.1| glycoside hydrolase family protein [Pedobacter saltans DSM 12145]
gi|324975260|gb|ADY54244.1| glycoside hydrolase family 28 [Pedobacter saltans DSM 12145]
Length = 440
Score = 40.0 bits (92), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 36/67 (53%), Gaps = 3/67 (4%)
Query: 84 IKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFLER 143
+ DFG + D T TE + + + F GG + VP+G++L+GS L+LE
Sbjct: 51 LTDFGVLNDSTIVQTEIIQSVID--KAFNAGGGVVI-VPKGVFLSGSLFFKPKTHLYLEE 107
Query: 144 GAVMLGS 150
GAV+ GS
Sbjct: 108 GAVLKGS 114
>gi|336402515|ref|ZP_08583249.1| hypothetical protein HMPREF0127_00562 [Bacteroides sp. 1_1_30]
gi|335948128|gb|EGN09853.1| hypothetical protein HMPREF0127_00562 [Bacteroides sp. 1_1_30]
Length = 455
Score = 40.0 bits (92), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 34/64 (53%), Gaps = 5/64 (7%)
Query: 88 GGVGDGTTSNTEAFRKAV-RYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFLERGAV 146
G +G T NT+ + R +G GG L P G +LTGS +L SN TL LE GA
Sbjct: 30 GAKANGKTLNTKLINSTIDRLNRG----GGGTLFFPAGTYLTGSIHLKSNITLELEAGAT 85
Query: 147 MLGS 150
+L S
Sbjct: 86 LLFS 89
>gi|297820578|ref|XP_002878172.1| hypothetical protein ARALYDRAFT_324272 [Arabidopsis lyrata subsp.
lyrata]
gi|297324010|gb|EFH54431.1| hypothetical protein ARALYDRAFT_324272 [Arabidopsis lyrata subsp.
lyrata]
Length = 589
Score = 40.0 bits (92), Expect = 0.36, Method: Composition-based stats.
Identities = 23/77 (29%), Positives = 36/77 (46%), Gaps = 2/77 (2%)
Query: 75 LPERKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGA--QLNVPEGLWLTGSFN 132
LP +A+S+ DFG GDG +T A + + + ++ P G +LT +
Sbjct: 27 LPGDSLALSVTDFGATGDGINYDTSAVQSTIDACNRHYTSSSSICRVTFPSGNYLTAKLH 86
Query: 133 LTSNFTLFLERGAVMLG 149
L S L + AV+LG
Sbjct: 87 LRSGVVLDVTENAVLLG 103
>gi|299145498|ref|ZP_07038566.1| putative exo-poly-alpha-D-galacturonosidase [Bacteroides sp.
3_1_23]
gi|298515989|gb|EFI39870.1| putative exo-poly-alpha-D-galacturonosidase [Bacteroides sp.
3_1_23]
Length = 450
Score = 39.7 bits (91), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 34/65 (52%), Gaps = 5/65 (7%)
Query: 88 GGVGDGTTSNTEAFRKAV-RYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFLERGAV 146
G +G T NT+ + R +G GG L P G +LTGS +L SN TL LE GA
Sbjct: 30 GAKANGKTLNTKLINSTIDRLNRG----GGGTLFFPAGTYLTGSIHLKSNITLELEAGAT 85
Query: 147 MLGSQ 151
+L S
Sbjct: 86 LLFSD 90
>gi|294645183|ref|ZP_06722905.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CC 2a]
gi|294808093|ref|ZP_06766866.1| polygalacturonase (pectinase) [Bacteroides xylanisolvens SD CC 1b]
gi|292639470|gb|EFF57766.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CC 2a]
gi|294444734|gb|EFG13428.1| polygalacturonase (pectinase) [Bacteroides xylanisolvens SD CC 1b]
Length = 455
Score = 39.7 bits (91), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 34/64 (53%), Gaps = 5/64 (7%)
Query: 88 GGVGDGTTSNTEAFRKAV-RYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFLERGAV 146
G +G T NT+ + R +G GG L P G +LTGS +L SN TL LE GA
Sbjct: 30 GAKANGKTLNTKLINSTIDRLNRG----GGGTLFFPAGTYLTGSIHLKSNITLELEAGAT 85
Query: 147 MLGS 150
+L S
Sbjct: 86 LLFS 89
>gi|427383818|ref|ZP_18880538.1| hypothetical protein HMPREF9447_01571 [Bacteroides oleiciplenus YIT
12058]
gi|425728523|gb|EKU91381.1| hypothetical protein HMPREF9447_01571 [Bacteroides oleiciplenus YIT
12058]
Length = 473
Score = 39.7 bits (91), Expect = 0.37, Method: Composition-based stats.
Identities = 21/68 (30%), Positives = 36/68 (52%), Gaps = 3/68 (4%)
Query: 83 SIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFLE 142
++KD+G DG T ++ A +A+ GG + VP G + S L S+ L+LE
Sbjct: 23 NVKDYGARADGVTIDSPAINRAISAASA---GGGGTVYVPAGEYACYSIRLASHVHLYLE 79
Query: 143 RGAVMLGS 150
+GA ++ +
Sbjct: 80 QGARIIAA 87
>gi|262408002|ref|ZP_06084550.1| polygalacturonase [Bacteroides sp. 2_1_22]
gi|293369111|ref|ZP_06615706.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CMC 3f]
gi|336416263|ref|ZP_08596599.1| hypothetical protein HMPREF1017_03707 [Bacteroides ovatus
3_8_47FAA]
gi|345511524|ref|ZP_08791064.1| polygalacturonase [Bacteroides sp. D1]
gi|423286902|ref|ZP_17265753.1| hypothetical protein HMPREF1069_00796 [Bacteroides ovatus
CL02T12C04]
gi|262354810|gb|EEZ03902.1| polygalacturonase [Bacteroides sp. 2_1_22]
gi|292635823|gb|EFF54320.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CMC 3f]
gi|335938994|gb|EGN00873.1| hypothetical protein HMPREF1017_03707 [Bacteroides ovatus
3_8_47FAA]
gi|345454069|gb|EEO49839.2| polygalacturonase [Bacteroides sp. D1]
gi|392674440|gb|EIY67888.1| hypothetical protein HMPREF1069_00796 [Bacteroides ovatus
CL02T12C04]
Length = 450
Score = 39.7 bits (91), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 34/65 (52%), Gaps = 5/65 (7%)
Query: 88 GGVGDGTTSNTEAFRKAV-RYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFLERGAV 146
G +G T NT+ + R +G GG L P G +LTGS +L SN TL LE GA
Sbjct: 30 GAKANGKTLNTKLINSTIDRLNRG----GGGTLFFPAGTYLTGSIHLKSNITLELEAGAT 85
Query: 147 MLGSQ 151
+L S
Sbjct: 86 LLFSD 90
>gi|237720811|ref|ZP_04551292.1| polygalacturonase [Bacteroides sp. 2_2_4]
gi|229449646|gb|EEO55437.1| polygalacturonase [Bacteroides sp. 2_2_4]
Length = 455
Score = 39.7 bits (91), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 34/64 (53%), Gaps = 5/64 (7%)
Query: 88 GGVGDGTTSNTEAFRKAV-RYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFLERGAV 146
G +G T NT+ + R +G GG L P G +LTGS +L SN TL LE GA
Sbjct: 30 GAKANGKTLNTKLINSTIDRLNRG----GGGTLFFPAGTYLTGSIHLKSNITLELEAGAT 85
Query: 147 MLGS 150
+L S
Sbjct: 86 LLFS 89
>gi|295084333|emb|CBK65856.1| Endopolygalacturonase [Bacteroides xylanisolvens XB1A]
Length = 430
Score = 39.7 bits (91), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 34/64 (53%), Gaps = 5/64 (7%)
Query: 88 GGVGDGTTSNTEAFRKAV-RYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFLERGAV 146
G +G T NT+ + R +G GG L P G +LTGS +L SN TL LE GA
Sbjct: 5 GAKANGKTLNTKLINSTIDRLNRG----GGGTLFFPAGTYLTGSIHLKSNITLELEAGAT 60
Query: 147 MLGS 150
+L S
Sbjct: 61 LLFS 64
>gi|322435361|ref|YP_004217573.1| glycoside hydrolase family protein [Granulicella tundricola
MP5ACTX9]
gi|321163088|gb|ADW68793.1| glycoside hydrolase family 28 [Granulicella tundricola MP5ACTX9]
Length = 465
Score = 39.7 bits (91), Expect = 0.40, Method: Composition-based stats.
Identities = 22/77 (28%), Positives = 38/77 (49%), Gaps = 4/77 (5%)
Query: 75 LPERKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEG-LWLTGSFNL 133
P + ++ FG +GDG +T A ++A+ GG ++ +P G +LTG+ L
Sbjct: 27 FPTSPIDYDVRTFGAIGDGIAVDTAAIQRAI---DTAAQNGGGRILIPGGKRFLTGALVL 83
Query: 134 TSNFTLFLERGAVMLGS 150
SN L A++L +
Sbjct: 84 KSNVNFHLADDAMLLAN 100
>gi|238916395|ref|YP_002929912.1| glycoside hydrolase family 28-like polygalacturonase [Eubacterium
eligens ATCC 27750]
gi|238871755|gb|ACR71465.1| Glycoside Hydrolase Family 28-like polygalacturonase [Eubacterium
eligens ATCC 27750]
Length = 458
Score = 39.7 bits (91), Expect = 0.40, Method: Composition-based stats.
Identities = 15/56 (26%), Positives = 32/56 (57%), Gaps = 3/56 (5%)
Query: 92 DGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFLERGAVM 147
+ + N +A +A+ Y+ +KGG + +P+G+W T + S+ L +E+ A++
Sbjct: 33 EDASRNADAINRAINYIS---EKGGGTVVIPDGIWFTAPIEIKSDVELRIEKNAIL 85
>gi|17978817|gb|AAL49975.1| polygalacturonase [Klebsiella oxytoca]
Length = 658
Score = 39.7 bits (91), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 36/64 (56%)
Query: 87 FGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFLERGAV 146
FG GDGTT NT+A ++A+ G ++ + G + TG+ L S+ TL + GA
Sbjct: 169 FGAKGDGTTLNTQALQRAIDSCTVTHYPQGCKVLISGGEFKTGALFLHSDMTLDIAAGAT 228
Query: 147 MLGS 150
+LGS
Sbjct: 229 LLGS 232
>gi|421728104|ref|ZP_16167260.1| fibronectin type III domain-containing protein [Klebsiella oxytoca
M5al]
gi|410371064|gb|EKP25789.1| fibronectin type III domain-containing protein [Klebsiella oxytoca
M5al]
Length = 658
Score = 39.7 bits (91), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 36/64 (56%)
Query: 87 FGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFLERGAV 146
FG GDGTT NT+A ++A+ G ++ + G + TG+ L S+ TL + GA
Sbjct: 169 FGAKGDGTTLNTQALQRAIDSCTVTHYPQGCKVLISGGEFKTGALFLHSDMTLDIAAGAT 228
Query: 147 MLGS 150
+LGS
Sbjct: 229 LLGS 232
>gi|423127885|ref|ZP_17115564.1| hypothetical protein HMPREF9694_04576 [Klebsiella oxytoca 10-5250]
gi|376394924|gb|EHT07574.1| hypothetical protein HMPREF9694_04576 [Klebsiella oxytoca 10-5250]
Length = 658
Score = 39.7 bits (91), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 36/64 (56%)
Query: 87 FGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFLERGAV 146
FG GDGTT NT+A ++A+ G ++ + G + TG+ L S+ TL + GA
Sbjct: 169 FGAKGDGTTLNTQALQQAIDSCTVTHYPQGCKVLISGGEFKTGALFLHSDMTLEIAAGAT 228
Query: 147 MLGS 150
+LGS
Sbjct: 229 LLGS 232
>gi|431796309|ref|YP_007223213.1| endopolygalacturonase [Echinicola vietnamensis DSM 17526]
gi|430787074|gb|AGA77203.1| endopolygalacturonase [Echinicola vietnamensis DSM 17526]
Length = 524
Score = 39.7 bits (91), Expect = 0.42, Method: Composition-based stats.
Identities = 25/65 (38%), Positives = 36/65 (55%), Gaps = 4/65 (6%)
Query: 83 SIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFLE 142
+I D GG +G TEA + A+ + GG L P G +LTG+ ++ SN TL L+
Sbjct: 29 NILDVGGNNEGQLC-TEAIQSAI---DKAAEAGGGTLFFPAGDYLTGAIHMKSNTTLHLD 84
Query: 143 RGAVM 147
GAV+
Sbjct: 85 AGAVL 89
>gi|403059374|ref|YP_006647591.1| polygalacturonase [Pectobacterium carotovorum subsp. carotovorum
PCC21]
gi|402806700|gb|AFR04338.1| polygalacturonase [Pectobacterium carotovorum subsp. carotovorum
PCC21]
Length = 659
Score = 39.7 bits (91), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 40/70 (57%)
Query: 81 AMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLF 140
++++ ++G GDG T++T A +KA+ G ++ V G + TG+ L S+ T
Sbjct: 162 SLNVTNYGAKGDGLTNDTVAIQKAIDDCTPAAYPKGCKVVVEGGTFKTGALFLHSDMTFE 221
Query: 141 LERGAVMLGS 150
+ +GA +LGS
Sbjct: 222 VAKGATLLGS 231
>gi|340348164|ref|ZP_08671257.1| glycoside hydrolase [Prevotella dentalis DSM 3688]
gi|433652999|ref|YP_007296853.1| endopolygalacturonase [Prevotella dentalis DSM 3688]
gi|339607813|gb|EGQ12738.1| glycoside hydrolase [Prevotella dentalis DSM 3688]
gi|433303532|gb|AGB29347.1| endopolygalacturonase [Prevotella dentalis DSM 3688]
Length = 857
Score = 39.7 bits (91), Expect = 0.43, Method: Composition-based stats.
Identities = 23/65 (35%), Positives = 33/65 (50%), Gaps = 4/65 (6%)
Query: 84 IKDFGGVGDGTTS-NTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFLE 142
I DFG T + N +A +A+ +GG ++ VP G WLTG+ L S L +E
Sbjct: 47 ITDFGASVRATAARNQKAINRAIATCS---RQGGGRVVVPRGEWLTGAIRLQSRVNLVVE 103
Query: 143 RGAVM 147
GA +
Sbjct: 104 EGATL 108
>gi|109289958|ref|YP_655490.1| variable tail fiber protein H [Mannheimia phage phiMHaA1]
gi|90110564|gb|ABD90574.1| variable tail fiber protein H [Mannheimia phage phiMhaA1-PHL101]
Length = 759
Score = 39.7 bits (91), Expect = 0.45, Method: Composition-based stats.
Identities = 17/39 (43%), Positives = 26/39 (66%)
Query: 82 MSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLN 120
+++ DFG VGDG T++ AF A+RY Q F + G ++N
Sbjct: 239 LTLFDFGAVGDGVTNDESAFVNAMRYSQFFIENGTFRIN 277
>gi|18410809|ref|NP_567055.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
gi|332646180|gb|AEE79701.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
Length = 490
Score = 39.7 bits (91), Expect = 0.46, Method: Composition-based stats.
Identities = 24/79 (30%), Positives = 37/79 (46%), Gaps = 6/79 (7%)
Query: 75 LPERKVAMSIKDFGGVGDGTTSNTEAFRKAV----RYMQGFGDKGGAQLNVPEGLWLTGS 130
LP + +S+ DFG GDG +T A + + R+ F ++ P G +LT
Sbjct: 28 LPGDSLTLSVTDFGATGDGINYDTSAIQSTIDACNRHYTSFSSI--CRVVFPSGNYLTAK 85
Query: 131 FNLTSNFTLFLERGAVMLG 149
+L S L + AV+LG
Sbjct: 86 LHLRSGVILDVTENAVLLG 104
>gi|402841353|ref|ZP_10889804.1| exo-poly-alpha-D-galacturonosidase [Klebsiella sp. OBRC7]
gi|402283174|gb|EJU31695.1| exo-poly-alpha-D-galacturonosidase [Klebsiella sp. OBRC7]
Length = 658
Score = 39.7 bits (91), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 36/64 (56%)
Query: 87 FGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFLERGAV 146
FG GDGTT NT+A ++A+ G ++ + G + TG+ L S+ TL + GA
Sbjct: 169 FGAKGDGTTLNTQALQQAIDSCTVAHYPQGCKVLISGGEFKTGALFLHSDMTLEIAAGAT 228
Query: 147 MLGS 150
+LGS
Sbjct: 229 LLGS 232
>gi|412993465|emb|CCO13976.1| predicted protein [Bathycoccus prasinos]
Length = 635
Score = 39.7 bits (91), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 26/55 (47%)
Query: 88 GGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFLE 142
G VGDG T NTE + A+ + L P G WLTG L SN + L+
Sbjct: 200 GAVGDGMTVNTETIQNALDSLTMKAQGRTQTLAFPPGRWLTGPLELKSNVKIVLD 254
>gi|448419208|ref|ZP_21580299.1| glycoside hydrolase family 28 [Halosarcina pallida JCM 14848]
gi|445675521|gb|ELZ28051.1| glycoside hydrolase family 28 [Halosarcina pallida JCM 14848]
Length = 535
Score = 39.3 bits (90), Expect = 0.48, Method: Composition-based stats.
Identities = 20/59 (33%), Positives = 35/59 (59%), Gaps = 3/59 (5%)
Query: 92 DGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFLERGAVMLGS 150
DG ++T+AF++A+ D GG ++VP G ++ G+ +L S+ TL L GA + +
Sbjct: 14 DGAETDTDAFQRAI---DACADGGGGTVSVPAGEFVVGTIHLRSHVTLELVAGATVFAA 69
>gi|452743525|ref|ZP_21943401.1| phage tail fiber repeat-containing protein, partial [Mannheimia
haemolytica serotype 6 str. H23]
gi|452088416|gb|EME04763.1| phage tail fiber repeat-containing protein, partial [Mannheimia
haemolytica serotype 6 str. H23]
Length = 481
Score = 39.3 bits (90), Expect = 0.49, Method: Composition-based stats.
Identities = 17/39 (43%), Positives = 26/39 (66%)
Query: 82 MSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLN 120
+++ DFG VGDG T++ AF A+RY Q F + G ++N
Sbjct: 239 LTLFDFGAVGDGVTNDESAFVNAMRYSQFFIENGTFRIN 277
>gi|315500573|ref|YP_004089375.1| glycoside hydrolase family 28 [Asticcacaulis excentricus CB 48]
gi|315418585|gb|ADU15224.1| glycoside hydrolase family 28 [Asticcacaulis excentricus CB 48]
Length = 476
Score = 39.3 bits (90), Expect = 0.49, Method: Composition-based stats.
Identities = 25/67 (37%), Positives = 35/67 (52%), Gaps = 4/67 (5%)
Query: 85 KDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFLERG 144
+DFG GDG T NT A ++A+ A L + G +LTGS L S L L++G
Sbjct: 46 EDFGARGDGVTRNTAALQRAIEAAA----AQNATLVLAPGTYLTGSLFLKSGMALRLDKG 101
Query: 145 AVMLGSQ 151
++G Q
Sbjct: 102 VTLVGEQ 108
>gi|90110614|gb|ABD90623.1| variable tail fiber protein H [Mannheimia phage phiMhaA1-BAA410]
Length = 759
Score = 39.3 bits (90), Expect = 0.49, Method: Composition-based stats.
Identities = 17/39 (43%), Positives = 26/39 (66%)
Query: 82 MSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLN 120
+++ DFG VGDG T++ AF A+RY Q F + G ++N
Sbjct: 239 LTLFDFGAVGDGVTNDESAFVNAMRYSQFFIENGTFRIN 277
>gi|423101730|ref|ZP_17089432.1| hypothetical protein HMPREF9686_00336 [Klebsiella oxytoca 10-5242]
gi|376390556|gb|EHT03239.1| hypothetical protein HMPREF9686_00336 [Klebsiella oxytoca 10-5242]
Length = 658
Score = 39.3 bits (90), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 36/64 (56%)
Query: 87 FGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFLERGAV 146
FG GDGTT NT+A ++A+ G ++ + G + TG+ L S+ TL + GA
Sbjct: 169 FGAKGDGTTLNTQALQQAIDSCTVAHYPQGCKVLISGGEFKTGALFLHSDMTLEIAAGAT 228
Query: 147 MLGS 150
+LGS
Sbjct: 229 LLGS 232
>gi|448568440|ref|ZP_21638017.1| polygalacturonase [Haloferax lucentense DSM 14919]
gi|445727390|gb|ELZ79004.1| polygalacturonase [Haloferax lucentense DSM 14919]
Length = 529
Score = 39.3 bits (90), Expect = 0.51, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 30/50 (60%), Gaps = 3/50 (6%)
Query: 98 TEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFLERGAVM 147
TEAF+ A+ + GG + VP G + G+ +L S+ TL+LE GAV+
Sbjct: 13 TEAFQTAI---DDCSESGGGTVTVPSGTYTVGTVHLRSDVTLYLEAGAVV 59
>gi|433431266|ref|ZP_20407611.1| polygalacturonase [Haloferax sp. BAB2207]
gi|432194084|gb|ELK50742.1| polygalacturonase [Haloferax sp. BAB2207]
Length = 529
Score = 39.3 bits (90), Expect = 0.51, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 30/50 (60%), Gaps = 3/50 (6%)
Query: 98 TEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFLERGAVM 147
TEAF+ A+ + GG + VP G + G+ +L S+ TL+LE GAV+
Sbjct: 13 TEAFQTAI---DDCSESGGGTVTVPNGTYTVGTVHLRSDVTLYLEAGAVV 59
>gi|4678268|emb|CAB41176.1| putative protein [Arabidopsis thaliana]
Length = 614
Score = 39.3 bits (90), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 37/79 (46%), Gaps = 6/79 (7%)
Query: 75 LPERKVAMSIKDFGGVGDGTTSNTEAFRKAV----RYMQGFGDKGGAQLNVPEGLWLTGS 130
LP + +S+ DFG GDG +T A + + R+ F ++ P G +LT
Sbjct: 28 LPGDSLTLSVTDFGATGDGINYDTSAIQSTIDACNRHYTSFSSI--CRVVFPSGNYLTAK 85
Query: 131 FNLTSNFTLFLERGAVMLG 149
+L S L + AV+LG
Sbjct: 86 LHLRSGVILDVTENAVLLG 104
>gi|375100955|ref|ZP_09747218.1| endopolygalacturonase [Saccharomonospora cyanea NA-134]
gi|374661687|gb|EHR61565.1| endopolygalacturonase [Saccharomonospora cyanea NA-134]
Length = 462
Score = 39.3 bits (90), Expect = 0.51, Method: Composition-based stats.
Identities = 25/78 (32%), Positives = 39/78 (50%), Gaps = 6/78 (7%)
Query: 75 LPERKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLT-GSFNL 133
+P R V + D+G VGDG+T A A+ M+ GG ++ +P G W + G L
Sbjct: 49 IPARTV--DVTDYGAVGDGSTDARPAIEAALADME---RAGGGRVVLPPGTWFSAGPIRL 103
Query: 134 TSNFTLFLERGAVMLGSQ 151
S+ L + GA + S+
Sbjct: 104 RSHVDLHVSSGATLRFSE 121
>gi|315500584|ref|YP_004089386.1| polygalacturonase [Asticcacaulis excentricus CB 48]
gi|315418596|gb|ADU15235.1| polygalacturonase [Asticcacaulis excentricus CB 48]
Length = 519
Score = 39.3 bits (90), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 37/75 (49%), Gaps = 3/75 (4%)
Query: 76 PERKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTS 135
P+ ++++ G GDG T ++ + A+ + +GG L P G + + L S
Sbjct: 22 PDTPFGLNVRHCGARGDGVTIDSPSINAAIEQLAA---QGGGTLYFPAGTYACYTIRLKS 78
Query: 136 NFTLFLERGAVMLGS 150
L+L+ GAV+L +
Sbjct: 79 RIRLYLDAGAVILAA 93
>gi|238917515|ref|YP_002931032.1| glycoside hydrolase family 28 [Eubacterium eligens ATCC 27750]
gi|238872875|gb|ACR72585.1| Glycoside Hydrolase Family 28 [Eubacterium eligens ATCC 27750]
Length = 518
Score = 39.3 bits (90), Expect = 0.51, Method: Composition-based stats.
Identities = 23/68 (33%), Positives = 38/68 (55%), Gaps = 5/68 (7%)
Query: 80 VAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTL 139
V +++++FG GDG +T A + A+ M D +++ VPEG++ S L N L
Sbjct: 80 VTLNVREFGAYGDGEHDDTNAIQCAI--MAAPKD---SRVLVPEGVYKISSIFLKDNLNL 134
Query: 140 FLERGAVM 147
L +GAV+
Sbjct: 135 ELAKGAVL 142
>gi|380695284|ref|ZP_09860143.1| polygalacturonase (Pectinase) [Bacteroides faecis MAJ27]
Length = 438
Score = 39.3 bits (90), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 39/87 (44%), Gaps = 10/87 (11%)
Query: 65 CAAGLLGDQYLPERKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEG 124
CAA +L + + K+ G +G NT+ + + GG L P G
Sbjct: 7 CAATVLHAERVDMLKI-------GAKANGKVLNTKLINTTIDRLNR---NGGGTLFFPAG 56
Query: 125 LWLTGSFNLTSNFTLFLERGAVMLGSQ 151
+LTGS L SN TL LE GA +L S
Sbjct: 57 TYLTGSIRLKSNITLELEAGATLLFSD 83
>gi|325106327|ref|YP_004275981.1| glycoside hydrolase family protein [Pedobacter saltans DSM 12145]
gi|324975175|gb|ADY54159.1| glycoside hydrolase family 28 [Pedobacter saltans DSM 12145]
Length = 558
Score = 39.3 bits (90), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 44/92 (47%), Gaps = 13/92 (14%)
Query: 69 LLGDQYLPERKVA----------MSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQ 118
LLG++ RK ++KDFG GD TT +T A + A+ + K G
Sbjct: 33 LLGNEVFAARKEEQPLSSLGQKIFNVKDFGAKGDSTTLDTVAVQTAID--KCAEAKEGIV 90
Query: 119 LNVPEGLWLTGSFNLTSNFTLFLERGAVMLGS 150
L +PEG ++ G+ L TL L G V+ GS
Sbjct: 91 L-IPEGTFIIGTIRLKDYVTLHLSAGGVLKGS 121
>gi|89096907|ref|ZP_01169798.1| hypothetical protein B14911_18420 [Bacillus sp. NRRL B-14911]
gi|89088287|gb|EAR67397.1| hypothetical protein B14911_18420 [Bacillus sp. NRRL B-14911]
Length = 558
Score = 39.3 bits (90), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 35/63 (55%), Gaps = 8/63 (12%)
Query: 82 MSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFL 141
+ +K+ G GDG T +TEAFR+A+ +G A++++P G +L L S +TL
Sbjct: 115 VCVKECGAAGDGITDDTEAFRRAI-------GRGKAKVSIPAGTYLVSGIQLPS-WTLLQ 166
Query: 142 ERG 144
G
Sbjct: 167 GEG 169
>gi|295102197|emb|CBK99742.1| Endopolygalacturonase [Faecalibacterium prausnitzii L2-6]
Length = 518
Score = 39.3 bits (90), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 33/65 (50%), Gaps = 5/65 (7%)
Query: 87 FGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFLERGAV 146
+G V DG T NT + A+ G + VP G + T S + S TL+LE+GAV
Sbjct: 87 YGLVADGETDNTGRLQAALSTC-----PRGGTVYVPAGRYRTASLFMKSCTTLYLEKGAV 141
Query: 147 MLGSQ 151
+LG
Sbjct: 142 LLGDN 146
>gi|418938241|ref|ZP_13491792.1| glycoside hydrolase family 28 [Rhizobium sp. PDO1-076]
gi|375055025|gb|EHS51309.1| glycoside hydrolase family 28 [Rhizobium sp. PDO1-076]
Length = 503
Score = 39.3 bits (90), Expect = 0.57, Method: Composition-based stats.
Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 6/66 (9%)
Query: 82 MSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFL 141
+ I+DFG + + N A + A+ + G L +P G W +G L SN TL +
Sbjct: 86 LDIRDFGASTE-SADNARAIQSAIAAI-----PAGGTLRLPAGSWSSGPVFLKSNMTLLI 139
Query: 142 ERGAVM 147
E GAV+
Sbjct: 140 EEGAVL 145
>gi|255532707|ref|YP_003093079.1| glycoside hydrolase family protein [Pedobacter heparinus DSM 2366]
gi|255345691|gb|ACU05017.1| glycoside hydrolase family 28 [Pedobacter heparinus DSM 2366]
Length = 542
Score = 39.3 bits (90), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 32/59 (54%), Gaps = 3/59 (5%)
Query: 87 FGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFLERGA 145
+G D + T+A +KA+ GG + P G +LTG+ +L SN T+F++ GA
Sbjct: 46 YGARNDSSKLATQAIKKAI---DAASKAGGGTVYFPAGKYLTGAIHLKSNITIFIDAGA 101
>gi|448621968|ref|ZP_21668717.1| polygalacturonase [Haloferax denitrificans ATCC 35960]
gi|445754998|gb|EMA06392.1| polygalacturonase [Haloferax denitrificans ATCC 35960]
Length = 538
Score = 38.9 bits (89), Expect = 0.62, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 30/50 (60%), Gaps = 3/50 (6%)
Query: 98 TEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFLERGAVM 147
TEAF+ A+ + GG + VP G + G+ +L S+ TL+LE GAV+
Sbjct: 22 TEAFQTAI---DDCSESGGGTVTVPSGTYTVGTVHLRSDVTLYLEAGAVV 68
>gi|317474355|ref|ZP_07933629.1| glycosyl hydrolase family 28 [Bacteroides eggerthii 1_2_48FAA]
gi|316909036|gb|EFV30716.1| glycosyl hydrolase family 28 [Bacteroides eggerthii 1_2_48FAA]
Length = 477
Score = 38.9 bits (89), Expect = 0.64, Method: Composition-based stats.
Identities = 22/65 (33%), Positives = 37/65 (56%), Gaps = 4/65 (6%)
Query: 83 SIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFLE 142
++ D+G +G+ T TEAF+KA+ D+GG ++ VP G +++G L SN +
Sbjct: 11 NVNDYGAIGNHTLC-TEAFQKAIDTAS---DRGGGKVIVPAGDYVSGPLFLRSNIEFEVC 66
Query: 143 RGAVM 147
GA +
Sbjct: 67 SGATI 71
>gi|254785604|ref|YP_003073033.1| glycoside hydrolase family 28 domain-containing protein
[Teredinibacter turnerae T7901]
gi|237685733|gb|ACR12997.1| glycoside hydrolase family 28 domain protein [Teredinibacter
turnerae T7901]
Length = 467
Score = 38.9 bits (89), Expect = 0.64, Method: Composition-based stats.
Identities = 24/71 (33%), Positives = 36/71 (50%), Gaps = 5/71 (7%)
Query: 75 LPERKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLT 134
P+R+ I+ +G V DG + +T A A+ GG ++ VP G +LTG+ +L
Sbjct: 48 FPDRQ--FDIQHYGAVADGQSLSTGAINSAIIACH---KAGGGRVLVPAGHYLTGAVHLL 102
Query: 135 SNFTLFLERGA 145
SN L L A
Sbjct: 103 SNVELHLAENA 113
>gi|423222160|ref|ZP_17208630.1| hypothetical protein HMPREF1062_00816 [Bacteroides cellulosilyticus
CL02T12C19]
gi|392643384|gb|EIY37135.1| hypothetical protein HMPREF1062_00816 [Bacteroides cellulosilyticus
CL02T12C19]
Length = 432
Score = 38.9 bits (89), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 33/67 (49%), Gaps = 3/67 (4%)
Query: 84 IKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFLER 143
I D G V D T TE + + KGG + +P+G +L+G+ L+LE
Sbjct: 49 ITDHGVVNDSTLLQTEKIQAVIDQASS---KGGGVIIIPKGTYLSGALFFKPKTHLYLEE 105
Query: 144 GAVMLGS 150
GAV+ GS
Sbjct: 106 GAVLKGS 112
>gi|390960072|ref|YP_006423829.1| endopolygalacturonase [Terriglobus roseus DSM 18391]
gi|390414990|gb|AFL90494.1| endopolygalacturonase [Terriglobus roseus DSM 18391]
Length = 571
Score = 38.9 bits (89), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 39/73 (53%), Gaps = 3/73 (4%)
Query: 78 RKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNF 137
+V +++ FG GDG T ++ A +A+ + GG + P G++ S L SN
Sbjct: 42 HEVYFNVRSFGATGDGVTIDSPAVNRAI---EAAAGAGGGTVVFPAGVYACFSVRLRSNV 98
Query: 138 TLFLERGAVMLGS 150
LFL++GA +L +
Sbjct: 99 ALFLQQGATILAA 111
>gi|340619595|ref|YP_004738048.1| polygalacturonase [Zobellia galactanivorans]
gi|339734392|emb|CAZ97769.1| Polygalacturonase, family GH28 [Zobellia galactanivorans]
Length = 462
Score = 38.9 bits (89), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 36/65 (55%), Gaps = 3/65 (4%)
Query: 86 DFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFLERGA 145
DFG + +G T NTEA ++A+ + GG + + +G +++G+ L TL + A
Sbjct: 31 DFGAIANGKTVNTEAIQRAI---DACNEGGGGTVILDKGDYVSGTLLLKDKVTLHIAEDA 87
Query: 146 VMLGS 150
++GS
Sbjct: 88 QLIGS 92
>gi|404484304|ref|ZP_11019517.1| hypothetical protein HMPREF1135_02577 [Clostridiales bacterium
OBRC5-5]
gi|404342621|gb|EJZ68992.1| hypothetical protein HMPREF1135_02577 [Clostridiales bacterium
OBRC5-5]
Length = 526
Score = 38.9 bits (89), Expect = 0.69, Method: Composition-based stats.
Identities = 19/72 (26%), Positives = 39/72 (54%), Gaps = 5/72 (6%)
Query: 80 VAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTL 139
V +++KDFG GDG +++ + A+ G + +P+G +L L SN L
Sbjct: 81 VLLNVKDFGAAGDGVKTDSVCIQAAINACPKDG-----TVYIPKGKYLCTPVFLKSNIDL 135
Query: 140 FLERGAVMLGSQ 151
++++ A+++G +
Sbjct: 136 WIDKDAILIGEK 147
>gi|373469919|ref|ZP_09561077.1| polygalacturonase [Lachnospiraceae bacterium oral taxon 082 str.
F0431]
gi|371763536|gb|EHO52007.1| polygalacturonase [Lachnospiraceae bacterium oral taxon 082 str.
F0431]
Length = 526
Score = 38.9 bits (89), Expect = 0.69, Method: Composition-based stats.
Identities = 19/72 (26%), Positives = 39/72 (54%), Gaps = 5/72 (6%)
Query: 80 VAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTL 139
V +++KDFG GDG +++ + A+ G + +P+G +L L SN L
Sbjct: 81 VLLNVKDFGAAGDGVKTDSVCIQAAINACPKDG-----TVYIPKGKYLCTPVFLKSNIDL 135
Query: 140 FLERGAVMLGSQ 151
++++ A+++G +
Sbjct: 136 WIDKDAILIGEK 147
>gi|224538847|ref|ZP_03679386.1| hypothetical protein BACCELL_03743, partial [Bacteroides
cellulosilyticus DSM 14838]
gi|224519522|gb|EEF88627.1| hypothetical protein BACCELL_03743 [Bacteroides cellulosilyticus
DSM 14838]
Length = 436
Score = 38.9 bits (89), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 33/67 (49%), Gaps = 3/67 (4%)
Query: 84 IKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFLER 143
I D G V D T TE + + KGG + +P+G +L+G+ L+LE
Sbjct: 53 ITDHGVVNDSTLLQTEKIQAVIDQASS---KGGGVIIIPKGTYLSGALFFKPKTHLYLEE 109
Query: 144 GAVMLGS 150
GAV+ GS
Sbjct: 110 GAVLKGS 116
>gi|300772844|ref|ZP_07082713.1| conserved hypothetical protein [Sphingobacterium spiritivorum ATCC
33861]
gi|300759015|gb|EFK55842.1| conserved hypothetical protein [Sphingobacterium spiritivorum ATCC
33861]
Length = 585
Score = 38.9 bits (89), Expect = 0.75, Method: Composition-based stats.
Identities = 23/67 (34%), Positives = 36/67 (53%), Gaps = 8/67 (11%)
Query: 47 PKRVGFS---GADGAIFD----PDSCAAGLL-GDQYLPERKVAMSIKDFGGVGDGTTSNT 98
P V +S G +G ++D PD AG G+Q +P+ ++++ G VGDG T NT
Sbjct: 196 PTTVAYSAIWGENGELWDKSRIPDFTNAGYRSGNQVIPDYPQSINVTTLGAVGDGVTDNT 255
Query: 99 EAFRKAV 105
F+ A+
Sbjct: 256 AVFKTAI 262
>gi|338730196|ref|YP_004659588.1| glycoside hydrolase family 28 [Thermotoga thermarum DSM 5069]
gi|335364547|gb|AEH50492.1| glycoside hydrolase family 28 [Thermotoga thermarum DSM 5069]
Length = 515
Score = 38.9 bits (89), Expect = 0.75, Method: Composition-based stats.
Identities = 25/74 (33%), Positives = 38/74 (51%), Gaps = 6/74 (8%)
Query: 76 PERKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTS 135
PE V + ++DFG GDG T +T A + A+ G + P G +L L S
Sbjct: 77 PESFV-VDVRDFGAKGDGKTLDTFAVQAAI-----MSCPEGGTVVFPPGTYLLTPVFLKS 130
Query: 136 NFTLFLERGAVMLG 149
N T+ +++ AV+LG
Sbjct: 131 NLTIEIQKDAVLLG 144
>gi|172058948|ref|YP_001815408.1| hypothetical protein Exig_2945 [Exiguobacterium sibiricum 255-15]
gi|171991469|gb|ACB62391.1| conserved hypothetical protein [Exiguobacterium sibiricum 255-15]
Length = 545
Score = 38.9 bits (89), Expect = 0.75, Method: Composition-based stats.
Identities = 20/54 (37%), Positives = 30/54 (55%), Gaps = 7/54 (12%)
Query: 82 MSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTS 135
+ +KD+G VGDG T +T AF++A+ G Q++VP G +L L S
Sbjct: 107 VDVKDYGAVGDGVTDDTLAFKEALA-------DGHRQVHVPAGTYLVRGIRLPS 153
>gi|388256014|ref|ZP_10133195.1| polygalacturonase, putative, pga28A [Cellvibrio sp. BR]
gi|387939714|gb|EIK46264.1| polygalacturonase, putative, pga28A [Cellvibrio sp. BR]
Length = 505
Score = 38.9 bits (89), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 41/74 (55%), Gaps = 5/74 (6%)
Query: 75 LPERKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLT 134
PER + ++DFG DG +NT+AF A++ D GG ++ V G +L+G +L
Sbjct: 83 FPER--SFDVRDFGAKADGKHNNTQAFAAAIKACH---DAGGGKVVVAGGDYLSGPIHLL 137
Query: 135 SNFTLFLERGAVML 148
SN L + GA +L
Sbjct: 138 SNINLHVAEGARIL 151
>gi|333901344|ref|YP_004475217.1| Exo-poly-alpha-galacturonosidase [Pseudomonas fulva 12-X]
gi|333116609|gb|AEF23123.1| Exo-poly-alpha-galacturonosidase [Pseudomonas fulva 12-X]
Length = 608
Score = 38.9 bits (89), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 34/68 (50%), Gaps = 13/68 (19%)
Query: 88 GGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLN----VPEGLWLTGSFNLTSNFTLFLER 143
G GDG T NT A +K + LN +P G++ TG+ L SN TL +
Sbjct: 165 GAKGDGKTLNTAAIQKTI---------DACSLNCKVLIPAGVFKTGALYLKSNMTLEIAE 215
Query: 144 GAVMLGSQ 151
GA +LGS+
Sbjct: 216 GATLLGSE 223
>gi|386346149|ref|YP_006044398.1| glycoside hydrolase family protein [Spirochaeta thermophila DSM
6578]
gi|339411116|gb|AEJ60681.1| glycoside hydrolase family 28 [Spirochaeta thermophila DSM 6578]
Length = 462
Score = 38.9 bits (89), Expect = 0.80, Method: Composition-based stats.
Identities = 21/64 (32%), Positives = 34/64 (53%), Gaps = 3/64 (4%)
Query: 82 MSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFL 141
+ + G G +T+AFR+A+ ++G GG +L+VP G +L G L S+ +
Sbjct: 3 VDVTTLGADPTGLRESTDAFREALSRIEG---AGGGRLHVPPGDYLVGPLRLCSHLEFEV 59
Query: 142 ERGA 145
RGA
Sbjct: 60 ARGA 63
>gi|410455614|ref|ZP_11309491.1| hypothetical protein BABA_17292 [Bacillus bataviensis LMG 21833]
gi|409929095|gb|EKN66185.1| hypothetical protein BABA_17292 [Bacillus bataviensis LMG 21833]
Length = 516
Score = 38.5 bits (88), Expect = 0.81, Method: Composition-based stats.
Identities = 23/73 (31%), Positives = 40/73 (54%), Gaps = 8/73 (10%)
Query: 72 DQYLPERKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSF 131
+Q L + +++ DFG VGDG T T+AF++A+ G ++ VP G+++T
Sbjct: 103 EQLLANIIMEVNVADFGAVGDGKTDCTDAFKRAL-------GTGRVKVVVPPGVFITKGI 155
Query: 132 NLTSNFTLFLERG 144
L S +T + +G
Sbjct: 156 RLPS-WTCLIGKG 167
>gi|293369347|ref|ZP_06615932.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CMC 3f]
gi|292635514|gb|EFF54021.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CMC 3f]
Length = 436
Score = 38.5 bits (88), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 32/68 (47%), Gaps = 3/68 (4%)
Query: 84 IKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFLER 143
I D+G V D T TE + + D GG + +PEG +L+G+ L LE
Sbjct: 50 ITDYGVVNDSTLLQTEQIQAVIDLA---SDNGGGVIVIPEGTYLSGALFFKPGTHLHLEE 106
Query: 144 GAVMLGSQ 151
A++ GS
Sbjct: 107 KAILKGSD 114
>gi|160886988|ref|ZP_02067991.1| hypothetical protein BACOVA_05002 [Bacteroides ovatus ATCC 8483]
gi|156107399|gb|EDO09144.1| polygalacturonase (pectinase) [Bacteroides ovatus ATCC 8483]
Length = 436
Score = 38.5 bits (88), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 32/68 (47%), Gaps = 3/68 (4%)
Query: 84 IKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFLER 143
I D+G V D T TE + + D GG + +PEG +L+G+ L LE
Sbjct: 50 ITDYGVVNDSTLLQTEQIQAVIDLA---SDNGGGVIVIPEGTYLSGALFFKPGTHLHLEE 106
Query: 144 GAVMLGSQ 151
A++ GS
Sbjct: 107 KAILKGSD 114
>gi|392950351|ref|ZP_10315908.1| glycoside hydrolase, family 28 [Lactobacillus pentosus KCA1]
gi|392434633|gb|EIW12600.1| glycoside hydrolase, family 28 [Lactobacillus pentosus KCA1]
Length = 402
Score = 38.5 bits (88), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 34/74 (45%), Gaps = 3/74 (4%)
Query: 78 RKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNF 137
+ S+ D+G T+ F+ A + D G + VP G + GS L SN
Sbjct: 3 ERATFSVTDYGAETQSEHVQTDQFQAA---LNACRDNNGGTVVVPAGQFQIGSIRLYSNT 59
Query: 138 TLFLERGAVMLGSQ 151
L L+ GAV+ GS+
Sbjct: 60 RLLLKSGAVIKGSE 73
>gi|292494024|ref|YP_003533166.1| polygalacturonase [Haloferax volcanii DS2]
gi|448289325|ref|ZP_21480496.1| polygalacturonase [Haloferax volcanii DS2]
gi|291369226|gb|ADE01456.1| possible polygalacturonase, putative [Haloferax volcanii DS2]
gi|445582406|gb|ELY36747.1| polygalacturonase [Haloferax volcanii DS2]
Length = 529
Score = 38.5 bits (88), Expect = 0.86, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 30/50 (60%), Gaps = 3/50 (6%)
Query: 98 TEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFLERGAVM 147
TEAF+ A+ + GG + VP G + G+ +L S+ TL+LE GAV+
Sbjct: 13 TEAFQTAI---DDCSESGGGTVTVPSGPYTVGTVHLRSDVTLYLEAGAVV 59
>gi|395448466|ref|YP_006388719.1| glycoside hydrolase family protein [Pseudomonas putida ND6]
gi|388562463|gb|AFK71604.1| glycoside hydrolase family protein [Pseudomonas putida ND6]
Length = 623
Score = 38.5 bits (88), Expect = 0.91, Method: Composition-based stats.
Identities = 20/69 (28%), Positives = 38/69 (55%), Gaps = 5/69 (7%)
Query: 83 SIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFLE 142
+++ +G GDG +T A ++A+ G ++ +P G + +G+ L S+ TL +
Sbjct: 170 NVQRYGAKGDGKALDTAAIQRAIDACSK-----GCKVLLPAGTYKSGALYLKSDMTLEIA 224
Query: 143 RGAVMLGSQ 151
GA +LGS+
Sbjct: 225 EGATLLGSE 233
>gi|345300045|ref|YP_004829403.1| glycoside hydrolase family protein [Enterobacter asburiae LF7a]
gi|345093982|gb|AEN65618.1| glycoside hydrolase family 28 [Enterobacter asburiae LF7a]
Length = 441
Score = 38.5 bits (88), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 29/48 (60%), Gaps = 4/48 (8%)
Query: 108 MQGFGDK----GGAQLNVPEGLWLTGSFNLTSNFTLFLERGAVMLGSQ 151
+QG D+ GG L V GL+LTG+ L+S+ TL LE GA +L S
Sbjct: 22 LQGLLDELAMSGGGTLVVTPGLYLTGTLVLSSHITLHLEAGARLLASH 69
>gi|423288962|ref|ZP_17267813.1| hypothetical protein HMPREF1069_02856 [Bacteroides ovatus
CL02T12C04]
gi|392668726|gb|EIY62220.1| hypothetical protein HMPREF1069_02856 [Bacteroides ovatus
CL02T12C04]
Length = 467
Score = 38.5 bits (88), Expect = 0.93, Method: Composition-based stats.
Identities = 19/68 (27%), Positives = 35/68 (51%), Gaps = 3/68 (4%)
Query: 83 SIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFLE 142
++ DFG DG T ++ A +A+ + GG + +P G + S L SN ++LE
Sbjct: 23 NVMDFGAKADGKTIDSPAINRAI---EAAAQAGGGTVYLPAGEYACYSIRLKSNIHIYLE 79
Query: 143 RGAVMLGS 150
+G ++ +
Sbjct: 80 QGTRIIAA 87
>gi|293370059|ref|ZP_06616625.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CMC 3f]
gi|299148451|ref|ZP_07041513.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. 3_1_23]
gi|292634851|gb|EFF53374.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CMC 3f]
gi|298513212|gb|EFI37099.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. 3_1_23]
Length = 467
Score = 38.5 bits (88), Expect = 0.93, Method: Composition-based stats.
Identities = 19/68 (27%), Positives = 35/68 (51%), Gaps = 3/68 (4%)
Query: 83 SIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFLE 142
++ DFG DG T ++ A +A+ + GG + +P G + S L SN ++LE
Sbjct: 23 NVMDFGAKADGKTIDSPAINRAI---EAAAQAGGGTVYLPAGEYACYSIRLKSNIHIYLE 79
Query: 143 RGAVMLGS 150
+G ++ +
Sbjct: 80 QGTRIIAA 87
>gi|237721216|ref|ZP_04551697.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. 2_2_4]
gi|229449012|gb|EEO54803.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. 2_2_4]
Length = 467
Score = 38.5 bits (88), Expect = 0.94, Method: Composition-based stats.
Identities = 19/68 (27%), Positives = 35/68 (51%), Gaps = 3/68 (4%)
Query: 83 SIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFLE 142
++ DFG DG T ++ A +A+ + GG + +P G + S L SN ++LE
Sbjct: 23 NVMDFGAKADGKTIDSPAINRAI---EAAAQAGGGTVYLPAGEYACYSIRLKSNIHIYLE 79
Query: 143 RGAVMLGS 150
+G ++ +
Sbjct: 80 QGTRIIAA 87
>gi|160886932|ref|ZP_02067935.1| hypothetical protein BACOVA_04946 [Bacteroides ovatus ATCC 8483]
gi|336415465|ref|ZP_08595804.1| hypothetical protein HMPREF1017_02912 [Bacteroides ovatus
3_8_47FAA]
gi|423294890|ref|ZP_17273017.1| hypothetical protein HMPREF1070_01682 [Bacteroides ovatus
CL03T12C18]
gi|156107343|gb|EDO09088.1| hypothetical protein BACOVA_04946 [Bacteroides ovatus ATCC 8483]
gi|335940344|gb|EGN02211.1| hypothetical protein HMPREF1017_02912 [Bacteroides ovatus
3_8_47FAA]
gi|392676081|gb|EIY69522.1| hypothetical protein HMPREF1070_01682 [Bacteroides ovatus
CL03T12C18]
Length = 467
Score = 38.5 bits (88), Expect = 0.94, Method: Composition-based stats.
Identities = 19/68 (27%), Positives = 35/68 (51%), Gaps = 3/68 (4%)
Query: 83 SIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFLE 142
++ DFG DG T ++ A +A+ + GG + +P G + S L SN ++LE
Sbjct: 23 NVMDFGAKADGKTIDSPAINRAI---EAAAQAGGGTVYLPAGEYACYSIRLKSNIHIYLE 79
Query: 143 RGAVMLGS 150
+G ++ +
Sbjct: 80 QGTRIIAA 87
>gi|256392647|ref|YP_003114211.1| carbohydrate binding family 6 [Catenulispora acidiphila DSM 44928]
gi|256358873|gb|ACU72370.1| Carbohydrate binding family 6 [Catenulispora acidiphila DSM 44928]
Length = 649
Score = 38.5 bits (88), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 40/70 (57%), Gaps = 4/70 (5%)
Query: 83 SIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTG-SFNLTSNFTLFL 141
++KD+G G+G+T+++ A KAV GG + P G + + + +L SN T+ L
Sbjct: 57 NVKDYGATGNGSTNDSPAINKAVAAAN---TAGGGIVEFPSGSYKSANTVHLKSNVTIQL 113
Query: 142 ERGAVMLGSQ 151
+ G+ +LGS
Sbjct: 114 DAGSKVLGSS 123
>gi|345519936|ref|ZP_08799343.1| exopolygalacturonase [Bacteroides sp. 4_3_47FAA]
gi|345457031|gb|EET16505.2| exopolygalacturonase [Bacteroides sp. 4_3_47FAA]
Length = 389
Score = 38.5 bits (88), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 33/68 (48%), Gaps = 3/68 (4%)
Query: 84 IKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFLER 143
+ D+G + D T TE + A+ GG + +P+G +L+G+ L LE
Sbjct: 49 LTDYGVINDSTLLQTEKIQSAI---DAAAQNGGGVIVIPKGTYLSGALFFKPKTHLHLEE 105
Query: 144 GAVMLGSQ 151
GAV+ GS
Sbjct: 106 GAVLKGSD 113
>gi|294776867|ref|ZP_06742330.1| polygalacturonase (pectinase) [Bacteroides vulgatus PC510]
gi|294449343|gb|EFG17880.1| polygalacturonase (pectinase) [Bacteroides vulgatus PC510]
Length = 434
Score = 38.5 bits (88), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 33/67 (49%), Gaps = 3/67 (4%)
Query: 84 IKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFLER 143
+ D+G + D T TE + A+ GG + +P+G +L+G+ L LE
Sbjct: 49 LTDYGVINDSTLLQTEKIQSAI---DAAAQNGGGVIVIPKGTYLSGALFFKPQTHLHLEE 105
Query: 144 GAVMLGS 150
GAV+ GS
Sbjct: 106 GAVLKGS 112
>gi|418032714|ref|ZP_12671196.1| hypothetical protein BSSC8_21400 [Bacillus subtilis subsp. subtilis
str. SC-8]
gi|351470421|gb|EHA30555.1| hypothetical protein BSSC8_21400 [Bacillus subtilis subsp. subtilis
str. SC-8]
Length = 644
Score = 38.5 bits (88), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 31/59 (52%), Gaps = 3/59 (5%)
Query: 77 ERKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTS 135
E K ++ D G DG NT F+KA + +KGG +L+ P+G +L G N TS
Sbjct: 337 ESKPTWNVLDLGFSPDGLIDNTAKFKKA---LSDLSEKGGGKLHFPKGTYLIGKQNTTS 392
>gi|148547114|ref|YP_001267216.1| glycoside hydrolase [Pseudomonas putida F1]
gi|148511172|gb|ABQ78032.1| glycoside hydrolase, family 28 [Pseudomonas putida F1]
Length = 606
Score = 38.5 bits (88), Expect = 0.99, Method: Composition-based stats.
Identities = 20/69 (28%), Positives = 38/69 (55%), Gaps = 5/69 (7%)
Query: 83 SIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFLE 142
+++ +G GDG +T A ++A+ G ++ +P G + +G+ L S+ TL +
Sbjct: 153 NVQRYGAKGDGKALDTAAIQRAIDACSK-----GCKVLLPAGTYKSGALYLKSDMTLEIA 207
Query: 143 RGAVMLGSQ 151
GA +LGS+
Sbjct: 208 EGATLLGSE 216
>gi|9630153|ref|NP_046580.1| hypothetical protein SPBc2p028 [Bacillus phage SPBc2]
gi|16079198|ref|NP_390022.1| glycosyl hydrolase [Bacillus subtilis subsp. subtilis str. 168]
gi|221310048|ref|ZP_03591895.1| hypothetical protein Bsubs1_11776 [Bacillus subtilis subsp.
subtilis str. 168]
gi|221314370|ref|ZP_03596175.1| hypothetical protein BsubsN3_11697 [Bacillus subtilis subsp.
subtilis str. NCIB 3610]
gi|221319292|ref|ZP_03600586.1| hypothetical protein BsubsJ_11623 [Bacillus subtilis subsp.
subtilis str. JH642]
gi|221323568|ref|ZP_03604862.1| hypothetical protein BsubsS_11752 [Bacillus subtilis subsp.
subtilis str. SMY]
gi|402776396|ref|YP_006630340.1| glycosyl hydrolase [Bacillus subtilis QB928]
gi|452914982|ref|ZP_21963608.1| hypothetical protein BS732_2647 [Bacillus subtilis MB73/2]
gi|81342092|sp|O31980.1|YOME_BACSU RecName: Full=SPBc2 prophage-derived uncharacterized protein YomE
gi|2634559|emb|CAB14057.1| putative glycosyl hydrolase; phage SPbeta [Bacillus subtilis subsp.
subtilis str. 168]
gi|3025506|gb|AAC13001.1| unknown [Bacillus phage SPbeta]
gi|402481577|gb|AFQ58086.1| Putative glycosyl hydrolase [Bacillus subtilis QB928]
gi|452115330|gb|EME05726.1| hypothetical protein BS732_2647 [Bacillus subtilis MB73/2]
Length = 644
Score = 38.5 bits (88), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 31/59 (52%), Gaps = 3/59 (5%)
Query: 77 ERKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTS 135
E K ++ D G DG NT F+KA + +KGG +L+ P+G +L G N TS
Sbjct: 337 ESKPTWNVLDLGFSPDGLIDNTAKFKKA---LSDLSEKGGGKLHFPKGTYLIGKQNTTS 392
>gi|322436856|ref|YP_004219068.1| glycoside hydrolase family protein [Granulicella tundricola
MP5ACTX9]
gi|321164583|gb|ADW70288.1| glycoside hydrolase family 28 [Granulicella tundricola MP5ACTX9]
Length = 414
Score = 38.5 bits (88), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 35/67 (52%), Gaps = 8/67 (11%)
Query: 84 IKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFLER 143
+K G GDG T +TEA +KA+ + + G +L+G + S TL +E
Sbjct: 25 VKTMGAKGDGVTKDTEAIQKAIDTC--------TVVTLSGGKFLSGPLEIKSGVTLDVET 76
Query: 144 GAVMLGS 150
GA++LGS
Sbjct: 77 GAMLLGS 83
>gi|212694769|ref|ZP_03302897.1| hypothetical protein BACDOR_04302 [Bacteroides dorei DSM 17855]
gi|345516118|ref|ZP_08795611.1| glycoside hydrolase [Bacteroides dorei 5_1_36/D4]
gi|423227933|ref|ZP_17214339.1| hypothetical protein HMPREF1063_00159 [Bacteroides dorei
CL02T00C15]
gi|423239066|ref|ZP_17220182.1| hypothetical protein HMPREF1065_00805 [Bacteroides dorei
CL03T12C01]
gi|423243193|ref|ZP_17224269.1| hypothetical protein HMPREF1064_00475 [Bacteroides dorei
CL02T12C06]
gi|212662623|gb|EEB23197.1| polygalacturonase (pectinase) [Bacteroides dorei DSM 17855]
gi|345455530|gb|EEO44191.2| glycoside hydrolase [Bacteroides dorei 5_1_36/D4]
gi|392637680|gb|EIY31546.1| hypothetical protein HMPREF1063_00159 [Bacteroides dorei
CL02T00C15]
gi|392646068|gb|EIY39787.1| hypothetical protein HMPREF1064_00475 [Bacteroides dorei
CL02T12C06]
gi|392647477|gb|EIY41178.1| hypothetical protein HMPREF1065_00805 [Bacteroides dorei
CL03T12C01]
Length = 465
Score = 38.5 bits (88), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 34/70 (48%), Gaps = 4/70 (5%)
Query: 79 KVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLW-LTGSFNLTSNF 137
K +S+ FG GDG AF KA M+ GGA + VP G + L G + SN
Sbjct: 48 KKQISLISFGAKGDGKKDCKPAFDKA---MKRAAHMGGAHIVVPAGEYLLNGPIHFVSNV 104
Query: 138 TLFLERGAVM 147
L L+ GA +
Sbjct: 105 CLELQEGATL 114
>gi|397694832|ref|YP_006532713.1| glycoside hydrolase family protein [Pseudomonas putida DOT-T1E]
gi|397331562|gb|AFO47921.1| glycoside hydrolase family protein [Pseudomonas putida DOT-T1E]
Length = 606
Score = 38.5 bits (88), Expect = 1.0, Method: Composition-based stats.
Identities = 20/69 (28%), Positives = 38/69 (55%), Gaps = 5/69 (7%)
Query: 83 SIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFLE 142
+++ +G GDG +T A ++A+ G ++ +P G + +G+ L S+ TL +
Sbjct: 153 NVQRYGAKGDGKALDTAAIQRAIDACSK-----GCKVLLPAGTYKSGALYLKSDMTLEIA 207
Query: 143 RGAVMLGSQ 151
GA +LGS+
Sbjct: 208 EGATLLGSE 216
>gi|336251902|ref|YP_004585870.1| glycoside hydrolase family 28 [Halopiger xanaduensis SH-6]
gi|335339826|gb|AEH39064.1| glycoside hydrolase family 28 [Halopiger xanaduensis SH-6]
Length = 539
Score = 38.5 bits (88), Expect = 1.0, Method: Composition-based stats.
Identities = 21/54 (38%), Positives = 30/54 (55%), Gaps = 3/54 (5%)
Query: 98 TEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFLERGAVMLGSQ 151
TEAF+ A+ D GG + VP G + G+ NL S+ TL LE GA + ++
Sbjct: 22 TEAFQNAI---DACADAGGGTVVVPSGEYEIGTINLRSHVTLSLEAGATVYAAR 72
>gi|386011445|ref|YP_005929722.1| Glycoside hydrolase family protein [Pseudomonas putida BIRD-1]
gi|313498151|gb|ADR59517.1| Glycoside hydrolase family protein [Pseudomonas putida BIRD-1]
Length = 606
Score = 38.5 bits (88), Expect = 1.0, Method: Composition-based stats.
Identities = 20/69 (28%), Positives = 38/69 (55%), Gaps = 5/69 (7%)
Query: 83 SIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFLE 142
+++ +G GDG +T A ++A+ G ++ +P G + +G+ L S+ TL +
Sbjct: 153 NVQRYGAKGDGKALDTAAIQRAIDACSK-----GCKVLLPAGTYKSGALYLKSDMTLEIA 207
Query: 143 RGAVMLGSQ 151
GA +LGS+
Sbjct: 208 EGATLLGSE 216
>gi|237710960|ref|ZP_04541441.1| glycoside hydrolase [Bacteroides sp. 9_1_42FAA]
gi|265750548|ref|ZP_06086611.1| glycoside hydrolase, family 28 [Bacteroides sp. 3_1_33FAA]
gi|229454804|gb|EEO60525.1| glycoside hydrolase [Bacteroides sp. 9_1_42FAA]
gi|263237444|gb|EEZ22894.1| glycoside hydrolase, family 28 [Bacteroides sp. 3_1_33FAA]
Length = 443
Score = 38.5 bits (88), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 34/70 (48%), Gaps = 4/70 (5%)
Query: 79 KVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLW-LTGSFNLTSNF 137
K +S+ FG GDG AF KA M+ GGA + VP G + L G + SN
Sbjct: 26 KKQISLISFGAKGDGKKDCKPAFDKA---MKRAAHMGGAHIVVPAGEYLLNGPIHFVSNV 82
Query: 138 TLFLERGAVM 147
L L+ GA +
Sbjct: 83 CLELQEGATL 92
>gi|224537997|ref|ZP_03678536.1| hypothetical protein BACCELL_02886 [Bacteroides cellulosilyticus
DSM 14838]
gi|224520403|gb|EEF89508.1| hypothetical protein BACCELL_02886 [Bacteroides cellulosilyticus
DSM 14838]
Length = 452
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 30/59 (50%), Gaps = 3/59 (5%)
Query: 92 DGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFLERGAVMLGS 150
DG T NT+ + + GG L P G +LTGS + S+ TL LE GA +L S
Sbjct: 36 DGKTLNTKLINSTIDRLNA---NGGGTLFFPAGTYLTGSIRMKSHITLELEAGATLLFS 91
>gi|67902986|ref|XP_681749.1| hypothetical protein AN8480.2 [Aspergillus nidulans FGSC A4]
gi|40747946|gb|EAA67102.1| hypothetical protein AN8480.2 [Aspergillus nidulans FGSC A4]
gi|259484426|tpe|CBF80635.1| TPA: conserved hypothetical protein [Aspergillus nidulans FGSC A4]
Length = 1380
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 30/59 (50%)
Query: 77 ERKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTS 135
+ K+ +++D+G GDG T +TEA +A+ G+ G+ P +W G L S
Sbjct: 243 DYKIWRNVRDYGAKGDGVTDDTEAINRAISDGGRCGENCGSSTRFPAVVWFPGGKYLVS 301
>gi|212693803|ref|ZP_03301931.1| hypothetical protein BACDOR_03324 [Bacteroides dorei DSM 17855]
gi|237709331|ref|ZP_04539812.1| glycoside hydrolase family 28 protein [Bacteroides sp. 9_1_42FAA]
gi|265755006|ref|ZP_06089920.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_33FAA]
gi|345513257|ref|ZP_08792779.1| glycoside hydrolase family 28 protein [Bacteroides dorei 5_1_36/D4]
gi|423232694|ref|ZP_17219094.1| hypothetical protein HMPREF1063_04914 [Bacteroides dorei
CL02T00C15]
gi|423242177|ref|ZP_17223287.1| hypothetical protein HMPREF1065_03910 [Bacteroides dorei
CL03T12C01]
gi|423247386|ref|ZP_17228436.1| hypothetical protein HMPREF1064_04642 [Bacteroides dorei
CL02T12C06]
gi|212663692|gb|EEB24266.1| polygalacturonase (pectinase) [Bacteroides dorei DSM 17855]
gi|229437124|gb|EEO47201.1| glycoside hydrolase family 28 protein [Bacteroides dorei 5_1_36/D4]
gi|229456716|gb|EEO62437.1| glycoside hydrolase family 28 protein [Bacteroides sp. 9_1_42FAA]
gi|263234617|gb|EEZ20196.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_33FAA]
gi|392623133|gb|EIY17238.1| hypothetical protein HMPREF1063_04914 [Bacteroides dorei
CL02T00C15]
gi|392632526|gb|EIY26485.1| hypothetical protein HMPREF1064_04642 [Bacteroides dorei
CL02T12C06]
gi|392639921|gb|EIY33729.1| hypothetical protein HMPREF1065_03910 [Bacteroides dorei
CL03T12C01]
Length = 434
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 33/68 (48%), Gaps = 3/68 (4%)
Query: 84 IKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFLER 143
+ D+G + D T TE + A+ GG + +P+G +L+G+ L LE
Sbjct: 49 LTDYGVINDSTLLQTEKIQSAI---DAAAQNGGGVIVIPKGTYLSGALFFKPKTHLHLEE 105
Query: 144 GAVMLGSQ 151
GAV+ GS
Sbjct: 106 GAVLKGSD 113
>gi|448551815|ref|ZP_21629549.1| polygalacturonase [Haloferax sp. ATCC BAA-645]
gi|445710205|gb|ELZ62027.1| polygalacturonase [Haloferax sp. ATCC BAA-645]
Length = 544
Score = 38.1 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 25/68 (36%), Positives = 34/68 (50%), Gaps = 4/68 (5%)
Query: 81 AMSIKDFGGVGDGTTS-NTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTL 139
A S D D T TEAF+ A+ GG + VP G + G+ +L S+ TL
Sbjct: 4 AASAFDVTAYADETADLRTEAFQTAIDDCSA---SGGGTVTVPSGTYTVGTVHLRSDVTL 60
Query: 140 FLERGAVM 147
+LE GAV+
Sbjct: 61 YLEAGAVV 68
>gi|319644255|ref|ZP_07998768.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_40A]
gi|423312681|ref|ZP_17290618.1| hypothetical protein HMPREF1058_01230 [Bacteroides vulgatus
CL09T03C04]
gi|317384246|gb|EFV65218.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_40A]
gi|392687415|gb|EIY80708.1| hypothetical protein HMPREF1058_01230 [Bacteroides vulgatus
CL09T03C04]
Length = 434
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 33/68 (48%), Gaps = 3/68 (4%)
Query: 84 IKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFLER 143
+ D+G + D T TE + A+ GG + +P+G +L+G+ L LE
Sbjct: 49 LTDYGVINDSTLLQTEKIQSAI---DAAAQNGGGVIVIPKGTYLSGALFFKPKTHLHLEE 105
Query: 144 GAVMLGSQ 151
GAV+ GS
Sbjct: 106 GAVLKGSD 113
>gi|261880664|ref|ZP_06007091.1| conserved hypothetical protein [Prevotella bergensis DSM 17361]
gi|270332617|gb|EFA43403.1| conserved hypothetical protein [Prevotella bergensis DSM 17361]
Length = 851
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 34/66 (51%), Gaps = 4/66 (6%)
Query: 83 SIKDFGGVGDGTTS-NTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFL 141
SI FG + + N +A +A+ KGG ++ VP G WLTG+ + S+ L +
Sbjct: 45 SITQFGASPKASAAKNQKAINRAILMC---SKKGGGRIVVPRGEWLTGAIRMQSHVNLVV 101
Query: 142 ERGAVM 147
E GA +
Sbjct: 102 EEGATL 107
>gi|340751772|ref|ZP_08688582.1| glycoside hydrolase [Fusobacterium mortiferum ATCC 9817]
gi|229420732|gb|EEO35779.1| glycoside hydrolase [Fusobacterium mortiferum ATCC 9817]
Length = 512
Score = 38.1 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 22/68 (32%), Positives = 37/68 (54%), Gaps = 5/68 (7%)
Query: 82 MSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFL 141
+++K FG GDG +++T A + A+ G ++ +P+G +L S L N T+ L
Sbjct: 81 LNVKRFGAKGDGVSNDTLALQTAIMSCPENG-----RVYIPKGKYLITSLFLKDNLTIEL 135
Query: 142 ERGAVMLG 149
GA +LG
Sbjct: 136 GEGAELLG 143
>gi|381184726|ref|ZP_09893257.1| pre-neck appendage protein [Listeriaceae bacterium TTU M1-001]
gi|380315402|gb|EIA18967.1| pre-neck appendage protein [Listeriaceae bacterium TTU M1-001]
Length = 383
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 35/65 (53%), Gaps = 7/65 (10%)
Query: 75 LPERKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLT 134
L + +S+ DFG V DG T +T+AF +A+ +GG +++PEG ++ +
Sbjct: 89 LRSEALQVSVMDFGAVADGKTDSTKAFVRAM-------GRGGRSVSIPEGEFIISGLKIP 141
Query: 135 SNFTL 139
SN L
Sbjct: 142 SNTEL 146
>gi|300681554|emb|CBH32652.1| polygalacturonase precursor, putative,expressed [Triticum aestivum]
Length = 443
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 28/48 (58%), Gaps = 2/48 (4%)
Query: 77 ERKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEG 124
E +V +S+ DFG VGDG ++T+AF A + G G LNVP G
Sbjct: 28 EARVLLSLDDFGAVGDGIANDTQAFVDAWKSACATG--GTTYLNVPAG 73
>gi|227114135|ref|ZP_03827791.1| exo-poly-alpha-D-galacturonosidase [Pectobacterium carotovorum
subsp. brasiliensis PBR1692]
Length = 659
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 39/70 (55%)
Query: 81 AMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLF 140
++++ ++G GDG ++T A +KA+ G ++ V G + TG+ L S+ T
Sbjct: 162 SLNVTNYGAKGDGVANDTVAIQKAIDDCTPAAYPKGCKVVVEGGTFKTGALFLHSDMTFE 221
Query: 141 LERGAVMLGS 150
+ +GA +LGS
Sbjct: 222 VAKGATLLGS 231
>gi|150004321|ref|YP_001299065.1| glycoside hydrolase [Bacteroides vulgatus ATCC 8482]
gi|149932745|gb|ABR39443.1| glycoside hydrolase family 28 [Bacteroides vulgatus ATCC 8482]
Length = 434
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 33/68 (48%), Gaps = 3/68 (4%)
Query: 84 IKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFLER 143
+ D+G + D T TE + A+ GG + +P+G +L+G+ L LE
Sbjct: 49 LTDYGVINDSTLLQTEKIQSAI---DAAAQNGGGVIVIPKGTYLSGALFFKPKTHLHLEE 105
Query: 144 GAVMLGSQ 151
GAV+ GS
Sbjct: 106 GAVLKGSD 113
>gi|423301889|ref|ZP_17279912.1| hypothetical protein HMPREF1057_03053 [Bacteroides finegoldii
CL09T03C10]
gi|408470980|gb|EKJ89512.1| hypothetical protein HMPREF1057_03053 [Bacteroides finegoldii
CL09T03C10]
Length = 436
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 36/81 (44%), Gaps = 11/81 (13%)
Query: 70 LGDQYLPERKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTG 129
LG QY I D+G V D T TE + + GG + +P+G +L+G
Sbjct: 43 LGKQY--------RITDYGVVNDSTKLQTEQIQNVI---DRAAKNGGGVIVIPKGTFLSG 91
Query: 130 SFNLTSNFTLFLERGAVMLGS 150
S L+LE AV+ GS
Sbjct: 92 SLFFKPKTHLYLEENAVLKGS 112
>gi|383100775|emb|CCG48006.1| polygalacturonase, putative, expressed [Triticum aestivum]
Length = 441
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 28/48 (58%), Gaps = 2/48 (4%)
Query: 77 ERKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEG 124
E +V +S+ DFG VGDG ++T+AF A + G G LNVP G
Sbjct: 27 EARVLLSLDDFGAVGDGIANDTQAFVDAWKAACATG--GTTYLNVPAG 72
>gi|336414751|ref|ZP_08595095.1| hypothetical protein HMPREF1017_02203 [Bacteroides ovatus
3_8_47FAA]
gi|335942121|gb|EGN03969.1| hypothetical protein HMPREF1017_02203 [Bacteroides ovatus
3_8_47FAA]
Length = 436
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 33/68 (48%), Gaps = 3/68 (4%)
Query: 84 IKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFLER 143
I D+G V D T TE + + + GG + +PEG +L+G+ L LE+
Sbjct: 50 ITDYGVVNDSTLLQTEKIQAVIDLA---SNNGGGVIVIPEGTYLSGALFFKPGTHLHLEK 106
Query: 144 GAVMLGSQ 151
AV+ GS
Sbjct: 107 KAVLKGSD 114
>gi|251795206|ref|YP_003009937.1| S-layer protein [Paenibacillus sp. JDR-2]
gi|247542832|gb|ACS99850.1| S-layer domain protein [Paenibacillus sp. JDR-2]
Length = 1979
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 37/68 (54%), Gaps = 10/68 (14%)
Query: 82 MSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFL 141
MS+KDFG GDG +T+AF+ A + G++GG + P G++ LTS+ L +
Sbjct: 387 MSVKDFGAAGDGVKDDTKAFQDA---LAAAGNRGGGVVFAP-----AGTYKLTSH--LIV 436
Query: 142 ERGAVMLG 149
G + G
Sbjct: 437 PTGVTLRG 444
>gi|385870873|gb|AFI89393.1| Exo-poly-alpha-D-galacturonosidase [Pectobacterium sp. SCC3193]
Length = 659
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 39/70 (55%)
Query: 81 AMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLF 140
++++ ++G GDG ++T A +KA+ G ++ V G + TG+ L S+ T
Sbjct: 162 SLNVTNYGAKGDGVANDTLAIQKAIDDCTPAAYPKGCKVVVEGGTFKTGALFLHSDMTFE 221
Query: 141 LERGAVMLGS 150
+ +GA +LGS
Sbjct: 222 VAKGATLLGS 231
>gi|421080242|ref|ZP_15541176.1| Exo-poly-alpha-D-galacturonosidase [Pectobacterium wasabiae CFBP
3304]
gi|401705095|gb|EJS95284.1| Exo-poly-alpha-D-galacturonosidase [Pectobacterium wasabiae CFBP
3304]
Length = 659
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 39/70 (55%)
Query: 81 AMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLF 140
++++ ++G GDG ++T A +KA+ G ++ V G + TG+ L S+ T
Sbjct: 162 SLNVTNYGAKGDGVANDTLAIQKAIDDCTPAAYPKGCKVVVEGGTFKTGALFLHSDMTFE 221
Query: 141 LERGAVMLGS 150
+ +GA +LGS
Sbjct: 222 VAKGATLLGS 231
>gi|423113000|ref|ZP_17100691.1| hypothetical protein HMPREF9689_00748 [Klebsiella oxytoca 10-5245]
gi|376389542|gb|EHT02232.1| hypothetical protein HMPREF9689_00748 [Klebsiella oxytoca 10-5245]
Length = 658
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 38/69 (55%)
Query: 82 MSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFL 141
+ + FG GDGTT NT+A ++A+ G ++ + G++ +G+ L S+ TL +
Sbjct: 164 IEARTFGAKGDGTTLNTQALQQAIDNCTVSHYPQGCKVLISGGIFKSGALFLHSDMTLEI 223
Query: 142 ERGAVMLGS 150
A +LGS
Sbjct: 224 AADATLLGS 232
>gi|347751432|ref|YP_004858997.1| hypothetical protein Bcoa_0999 [Bacillus coagulans 36D1]
gi|347583950|gb|AEP00217.1| hypothetical protein Bcoa_0999 [Bacillus coagulans 36D1]
Length = 475
Score = 38.1 bits (87), Expect = 1.3, Method: Composition-based stats.
Identities = 20/54 (37%), Positives = 29/54 (53%), Gaps = 7/54 (12%)
Query: 82 MSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTS 135
+++ DFG GDG T T AF+KA+ G ++ VPEG++L L S
Sbjct: 107 VNVADFGAAGDGKTDCTAAFQKAL-------GNGRVKVIVPEGIYLVKGLKLPS 153
>gi|423107123|ref|ZP_17094818.1| hypothetical protein HMPREF9687_00369 [Klebsiella oxytoca 10-5243]
gi|376389249|gb|EHT01941.1| hypothetical protein HMPREF9687_00369 [Klebsiella oxytoca 10-5243]
Length = 658
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 38/69 (55%)
Query: 82 MSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFL 141
+ + FG GDGTT NT+A ++A+ G ++ + G++ +G+ L S+ TL +
Sbjct: 164 IEARTFGAKGDGTTLNTQALQQAIDNCTVSHYPQGCKVLISGGIFKSGALFLHSDMTLEI 223
Query: 142 ERGAVMLGS 150
A +LGS
Sbjct: 224 AADATLLGS 232
>gi|372208513|ref|ZP_09496315.1| glycoside hydrolase family protein [Flavobacteriaceae bacterium
S85]
Length = 464
Score = 38.1 bits (87), Expect = 1.3, Method: Composition-based stats.
Identities = 23/69 (33%), Positives = 36/69 (52%), Gaps = 4/69 (5%)
Query: 83 SIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEG-LWLTGSFNLTSNFTLFL 141
++ DFG DG T +T+A + A+ + GG + +P G + G+ L TL +
Sbjct: 22 NVLDFGAKADGLTKDTQAVQAAI---NACTENGGGTVLIPAGKTVVIGTIYLKDFVTLHV 78
Query: 142 ERGAVMLGS 150
GAV+LGS
Sbjct: 79 ANGAVLLGS 87
>gi|365157440|ref|ZP_09353706.1| hypothetical protein HMPREF1015_02742 [Bacillus smithii 7_3_47FAA]
gi|363624866|gb|EHL75928.1| hypothetical protein HMPREF1015_02742 [Bacillus smithii 7_3_47FAA]
Length = 558
Score = 38.1 bits (87), Expect = 1.3, Method: Composition-based stats.
Identities = 22/63 (34%), Positives = 35/63 (55%), Gaps = 8/63 (12%)
Query: 82 MSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFL 141
+++ D+G +GDG T NT+AF+KA+ G + VPEG +L L S +T +
Sbjct: 122 VNVLDYGAIGDGKTDNTKAFQKAI-------GNGRVIVYVPEGNFLIRGIKLPS-WTCLI 173
Query: 142 ERG 144
+G
Sbjct: 174 GKG 176
>gi|354723575|ref|ZP_09037790.1| glycoside hydrolase family protein [Enterobacter mori LMG 25706]
Length = 430
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 38/70 (54%), Gaps = 5/70 (7%)
Query: 82 MSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFL 141
+SI FG +T A ++A+ K G + +P G +LTG+ L S+ TL L
Sbjct: 4 ISILTFGADPSAERISTTAIQQAIAKA-----KPGDSVVIPAGRYLTGAIFLKSDITLHL 58
Query: 142 ERGAVMLGSQ 151
+G+V+LGSQ
Sbjct: 59 VQGSVLLGSQ 68
>gi|401834507|gb|AFQ23185.1| exo-polygalacturonase [Klebsiella sp. CGMCC 4433]
Length = 658
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 38/69 (55%)
Query: 82 MSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFL 141
+ + FG GDGTT NT+A ++A+ G ++ + G++ +G+ L S+ TL +
Sbjct: 164 IEARTFGAKGDGTTLNTQALQQAIDNCTVSHYPQGCKVLISGGIFKSGALFLHSDMTLEI 223
Query: 142 ERGAVMLGS 150
A +LGS
Sbjct: 224 AADATLLGS 232
>gi|345566218|gb|EGX49162.1| hypothetical protein AOL_s00078g546 [Arthrobotrys oligospora ATCC
24927]
Length = 1794
Score = 38.1 bits (87), Expect = 1.3, Method: Composition-based stats.
Identities = 23/69 (33%), Positives = 34/69 (49%), Gaps = 6/69 (8%)
Query: 79 KVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQ------GFGDKGGAQLNVPEGLWLTGSFN 132
KV ++KD+G GDG T +TEA A+R G GA + P G +L
Sbjct: 542 KVYRNVKDYGAKGDGVTDDTEAINNAIREGNRCQANCGATSVLGAVVYFPTGTYLVSGSL 601
Query: 133 LTSNFTLFL 141
L+ +T+F+
Sbjct: 602 LSDYYTVFI 610
>gi|404406291|ref|ZP_10997875.1| glycoside hydrolase family protein [Alistipes sp. JC136]
Length = 476
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 36/66 (54%), Gaps = 5/66 (7%)
Query: 83 SIKDFGGVGD-GTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFL 141
SI ++ G+ + GTT+ T A ++A+ K G L P G +L G L S+ L L
Sbjct: 117 SIMEYKGIDNTGTTNVTAAVQRAIDACA----KKGRTLIFPAGEYLCGQLRLPSHAHLHL 172
Query: 142 ERGAVM 147
ERGAV+
Sbjct: 173 ERGAVI 178
>gi|383122658|ref|ZP_09943350.1| hypothetical protein BSIG_0597 [Bacteroides sp. 1_1_6]
gi|251842244|gb|EES70324.1| hypothetical protein BSIG_0597 [Bacteroides sp. 1_1_6]
Length = 445
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 33/64 (51%), Gaps = 5/64 (7%)
Query: 88 GGVGDGTTSNTEAFRKAV-RYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFLERGAV 146
G +G NT+ + R +G GG L P G +LTGS +L SN TL LE GA
Sbjct: 30 GAKANGKALNTKLINSTIDRLNRG----GGGTLFFPAGTYLTGSIHLKSNITLELEAGAT 85
Query: 147 MLGS 150
+L S
Sbjct: 86 LLFS 89
>gi|149408210|ref|YP_001294644.1| hypothetical protein ORF051 [Pseudomonas phage PA11]
Length = 464
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 52/112 (46%), Gaps = 13/112 (11%)
Query: 17 FSRPSWATIVLIVTLITIFSLEITKKSVLSPKRVGFSGADGAIFDPDSCAAGLLGDQYLP 76
+P + V + +IT +L T VGFS + + PD G +G + L
Sbjct: 9 LQKPDNSVTVNLEDIITEVNLGDTTSPTKGAGLVGFSSS---VSYPD----GTVGAEILE 61
Query: 77 -ERKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWL 127
K+ +++KD+G VGDG T +T A + A+ + + D L P G +L
Sbjct: 62 VSSKIGVTVKDYGAVGDGVTDDTVAIQAAITAVGQYKD-----LGWPRGTYL 108
>gi|29346428|ref|NP_809931.1| polygalacturonase (Pectinase) [Bacteroides thetaiotaomicron
VPI-5482]
gi|29338324|gb|AAO76125.1| polygalacturonase (Pectinase) [Bacteroides thetaiotaomicron
VPI-5482]
Length = 445
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 33/64 (51%), Gaps = 5/64 (7%)
Query: 88 GGVGDGTTSNTEAFRKAV-RYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFLERGAV 146
G +G NT+ + R +G GG L P G +LTGS +L SN TL LE GA
Sbjct: 30 GAKANGKALNTKLINSTIDRLNRG----GGGTLFFPAGTYLTGSIHLKSNITLELEAGAT 85
Query: 147 MLGS 150
+L S
Sbjct: 86 LLFS 89
>gi|50122473|ref|YP_051640.1| polygalacturonase [Pectobacterium atrosepticum SCRI1043]
gi|49612999|emb|CAG76450.1| putative polygalacturonase [Pectobacterium atrosepticum SCRI1043]
Length = 448
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 36/68 (52%), Gaps = 3/68 (4%)
Query: 83 SIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFLE 142
SI+ + DG T +T F++A+ + +GG L V G +L G L SNF L LE
Sbjct: 8 SIQSYSPAADGVTPDTAIFQQAIDRIAA---QGGGTLTVEPGRYLLGGLLLPSNFCLQLE 64
Query: 143 RGAVMLGS 150
GA ++ S
Sbjct: 65 AGAELIVS 72
>gi|298385760|ref|ZP_06995318.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. 1_1_14]
gi|298261901|gb|EFI04767.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. 1_1_14]
Length = 445
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 33/64 (51%), Gaps = 5/64 (7%)
Query: 88 GGVGDGTTSNTEAFRKAV-RYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFLERGAV 146
G +G NT+ + R +G GG L P G +LTGS +L SN TL LE GA
Sbjct: 30 GAKANGKALNTKLINSTIDRLNRG----GGGTLFFPAGTYLTGSIHLKSNITLELEAGAT 85
Query: 147 MLGS 150
+L S
Sbjct: 86 LLFS 89
>gi|423299813|ref|ZP_17277838.1| hypothetical protein HMPREF1057_00979 [Bacteroides finegoldii
CL09T03C10]
gi|408473622|gb|EKJ92144.1| hypothetical protein HMPREF1057_00979 [Bacteroides finegoldii
CL09T03C10]
Length = 450
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 33/65 (50%), Gaps = 5/65 (7%)
Query: 88 GGVGDGTTSNTEAFRKAV-RYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFLERGAV 146
G +G NT+ + R +G GG L P G +LTGS +L SN TL LE GA
Sbjct: 30 GAKANGKALNTKLINSTIDRLNRG----GGGTLFFPAGTYLTGSIHLKSNITLELEAGAT 85
Query: 147 MLGSQ 151
+L S
Sbjct: 86 LLFSD 90
>gi|218133835|ref|ZP_03462639.1| hypothetical protein BACPEC_01724 [[Bacteroides] pectinophilus ATCC
43243]
gi|217991210|gb|EEC57216.1| polygalacturonase (pectinase) [[Bacteroides] pectinophilus ATCC
43243]
Length = 521
Score = 38.1 bits (87), Expect = 1.3, Method: Composition-based stats.
Identities = 23/68 (33%), Positives = 36/68 (52%), Gaps = 5/68 (7%)
Query: 80 VAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTL 139
V +++KDFG G+G +T A + A+ G ++ VP G + S L S+ TL
Sbjct: 84 VTLNVKDFGAYGNGEHDDTNAIQCAIMSCPKAG-----RILVPAGEYKISSIFLKSDITL 138
Query: 140 FLERGAVM 147
L +GAV+
Sbjct: 139 DLAKGAVL 146
>gi|253689733|ref|YP_003018923.1| glycoside hydrolase family protein [Pectobacterium carotovorum
subsp. carotovorum PC1]
gi|251756311|gb|ACT14387.1| glycoside hydrolase family 28 [Pectobacterium carotovorum subsp.
carotovorum PC1]
Length = 444
Score = 38.1 bits (87), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 36/68 (52%), Gaps = 3/68 (4%)
Query: 83 SIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFLE 142
SI+ + DG T +T F++A+ + +GG L V G +L G L SNF L LE
Sbjct: 4 SIQSYSPAADGVTPDTAIFQQAIDRIAA---QGGGTLTVEPGRYLLGGLLLPSNFCLQLE 60
Query: 143 RGAVMLGS 150
GA ++ S
Sbjct: 61 AGAELIVS 68
>gi|383113004|ref|ZP_09933785.1| hypothetical protein BSGG_0152 [Bacteroides sp. D2]
gi|382948911|gb|EFS29452.2| hypothetical protein BSGG_0152 [Bacteroides sp. D2]
Length = 444
Score = 37.7 bits (86), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 33/65 (50%), Gaps = 5/65 (7%)
Query: 88 GGVGDGTTSNTEAFRKAV-RYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFLERGAV 146
G +G NT+ + R +G GG L P G +LTGS +L SN TL LE GA
Sbjct: 30 GAKANGKALNTKLINSTIDRLNRG----GGGTLFFPAGTYLTGSIHLKSNITLELEAGAT 85
Query: 147 MLGSQ 151
+L S
Sbjct: 86 LLFSD 90
>gi|119474319|ref|XP_001259035.1| hypothetical protein NFIA_004980 [Neosartorya fischeri NRRL 181]
gi|119407188|gb|EAW17138.1| conserved hypothetical protein [Neosartorya fischeri NRRL 181]
Length = 1324
Score = 37.7 bits (86), Expect = 1.4, Method: Composition-based stats.
Identities = 18/58 (31%), Positives = 29/58 (50%)
Query: 79 KVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSN 136
K+ +++D+G GDG T +TEA +A+ G G+ P +W G L S+
Sbjct: 177 KIWRNVRDYGAKGDGVTDDTEAINRAISDGGRCGADCGSSTRYPAVIWFPGGTYLVSS 234
>gi|448604055|ref|ZP_21657479.1| polygalacturonase [Haloferax sulfurifontis ATCC BAA-897]
gi|445744851|gb|ELZ96323.1| polygalacturonase [Haloferax sulfurifontis ATCC BAA-897]
Length = 538
Score = 37.7 bits (86), Expect = 1.4, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 29/50 (58%), Gaps = 3/50 (6%)
Query: 98 TEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFLERGAVM 147
TEAF+ A+ + G + VP G + G+ +L SN TL+LE GAV+
Sbjct: 22 TEAFQTAI---DDCTESDGGTVTVPSGTYTVGTVHLRSNVTLYLEAGAVV 68
>gi|315497213|ref|YP_004086017.1| glycoside hydrolase family 28 [Asticcacaulis excentricus CB 48]
gi|315415225|gb|ADU11866.1| glycoside hydrolase family 28 [Asticcacaulis excentricus CB 48]
Length = 466
Score = 37.7 bits (86), Expect = 1.4, Method: Composition-based stats.
Identities = 16/37 (43%), Positives = 23/37 (62%)
Query: 115 GGAQLNVPEGLWLTGSFNLTSNFTLFLERGAVMLGSQ 151
G + VP+G+W TG NL S+ L L +GA +L S+
Sbjct: 85 GSGNVIVPQGIWPTGKINLKSHVNLHLSKGATLLFSE 121
>gi|254360857|ref|ZP_04977004.1| bacteriophage variable tail fiber protein H [Mannheimia haemolytica
PHL213]
gi|153092331|gb|EDN73400.1| bacteriophage variable tail fiber protein H [Mannheimia haemolytica
PHL213]
Length = 299
Score = 37.7 bits (86), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 26/39 (66%)
Query: 82 MSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLN 120
+++ DFG VGDG T++ AF A+RY Q F + G ++N
Sbjct: 239 LTLFDFGAVGDGVTNDESAFVNAMRYSQFFIENGTFRIN 277
>gi|167761858|ref|ZP_02433985.1| hypothetical protein BACSTE_00201 [Bacteroides stercoris ATCC
43183]
gi|167700228|gb|EDS16807.1| polygalacturonase (pectinase) [Bacteroides stercoris ATCC 43183]
Length = 432
Score = 37.7 bits (86), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 34/68 (50%), Gaps = 3/68 (4%)
Query: 83 SIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFLE 142
+I D+G D T TE + + + GG + +P+G +L+GS L++E
Sbjct: 48 TITDYGVANDSTILQTEKIQAVIDRA---AENGGGVIIIPKGTFLSGSIFFKPKTHLYME 104
Query: 143 RGAVMLGS 150
GAV+ GS
Sbjct: 105 EGAVLKGS 112
>gi|423301906|ref|ZP_17279929.1| hypothetical protein HMPREF1057_03070 [Bacteroides finegoldii
CL09T03C10]
gi|408470997|gb|EKJ89529.1| hypothetical protein HMPREF1057_03070 [Bacteroides finegoldii
CL09T03C10]
Length = 489
Score = 37.7 bits (86), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 49/109 (44%), Gaps = 7/109 (6%)
Query: 46 SPKR-VGFSGAD--GAIFDPDSCAAGLLGDQYLPERKVAMSIKDFGGVGDGTTSNTEAFR 102
SPKR + S D PD A +G Q +P+ + DFG D + +T +
Sbjct: 17 SPKRTITVSAHDWGNVPVQPDLSWAEQVGAQRVPKSD-CIHATDFGLKSDTSVLSTRFVQ 75
Query: 103 KAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFLERGAVMLGSQ 151
A+ +KGG + +P G++ G+ + S L L +G ++ S+
Sbjct: 76 SAI---DACHEKGGGTVIIPSGVYRIGALFIKSGVNLHLSKGTTLIASE 121
>gi|423215151|ref|ZP_17201679.1| hypothetical protein HMPREF1074_03211 [Bacteroides xylanisolvens
CL03T12C04]
gi|392692414|gb|EIY85652.1| hypothetical protein HMPREF1074_03211 [Bacteroides xylanisolvens
CL03T12C04]
Length = 513
Score = 37.7 bits (86), Expect = 1.4, Method: Composition-based stats.
Identities = 19/65 (29%), Positives = 35/65 (53%), Gaps = 3/65 (4%)
Query: 83 SIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFLE 142
++K+ G G S TE + + + +GG + P G++LT + + +N TL++E
Sbjct: 23 NMKELGADPRGIESCTELINQTI---EKASSEGGGTIYFPAGVYLTATIYMKNNITLYVE 79
Query: 143 RGAVM 147
GAV+
Sbjct: 80 SGAVL 84
>gi|383114421|ref|ZP_09935185.1| hypothetical protein BSGG_1407 [Bacteroides sp. D2]
gi|313693872|gb|EFS30707.1| hypothetical protein BSGG_1407 [Bacteroides sp. D2]
Length = 436
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 41/106 (38%), Gaps = 21/106 (19%)
Query: 64 SCAAGLLGDQYLPERKVAMS------------------IKDFGGVGDGTTSNTEAFRKAV 105
C+ L G + P+ K+ I D+G V D T TE + V
Sbjct: 12 CCSLQLFGQEKFPDGKIIPDWFYKNDKTDINGLGKKFLITDYGVVNDSTLLQTEKIQAVV 71
Query: 106 RYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFLERGAVMLGSQ 151
+ GG + +PEG +L+G+ L LE AV+ GS
Sbjct: 72 DLA---SNNGGGVIVIPEGTYLSGALFFKPGTHLHLEEKAVLKGSD 114
>gi|261820710|ref|YP_003258816.1| fibronectin type III domain-containing protein [Pectobacterium
wasabiae WPP163]
gi|261604723|gb|ACX87209.1| Fibronectin type III domain protein [Pectobacterium wasabiae
WPP163]
Length = 659
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 39/70 (55%)
Query: 81 AMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLF 140
++++ ++G GDG ++T A +KA+ G ++ V G + TG+ L S+ T
Sbjct: 162 SLNVTNYGAKGDGIANDTLAIQKAIDDCTPAAYPKGCKVVVEGGTFKTGALFLHSDMTFE 221
Query: 141 LERGAVMLGS 150
+ +GA +LGS
Sbjct: 222 VAKGATLLGS 231
>gi|336112920|ref|YP_004567687.1| pectin lyase-like protein [Bacillus coagulans 2-6]
gi|335366350|gb|AEH52301.1| Pectin lyase-like protein [Bacillus coagulans 2-6]
Length = 467
Score = 37.7 bits (86), Expect = 1.5, Method: Composition-based stats.
Identities = 20/54 (37%), Positives = 29/54 (53%), Gaps = 7/54 (12%)
Query: 82 MSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTS 135
+++ DFG GDG T T AF+KA+ G ++ VPEG++L L S
Sbjct: 99 VNVADFGAAGDGKTDCTAAFQKAL-------GNGRVKVIVPEGVYLVKGLKLPS 145
>gi|448540217|ref|ZP_21623454.1| polygalacturonase [Haloferax sp. ATCC BAA-646]
gi|448554079|ref|ZP_21630869.1| polygalacturonase [Haloferax sp. ATCC BAA-644]
gi|445710091|gb|ELZ61914.1| polygalacturonase [Haloferax sp. ATCC BAA-646]
gi|445719264|gb|ELZ70946.1| polygalacturonase [Haloferax sp. ATCC BAA-644]
Length = 535
Score = 37.7 bits (86), Expect = 1.5, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 29/50 (58%), Gaps = 3/50 (6%)
Query: 98 TEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFLERGAVM 147
TEAF+ A+ GG + VP G + G+ +L S+ TL+LE GAV+
Sbjct: 13 TEAFQTAIDDCSA---SGGGTVTVPSGTYTVGTVHLRSDVTLYLEAGAVV 59
>gi|320106925|ref|YP_004182515.1| glycoside hydrolase family protein [Terriglobus saanensis SP1PR4]
gi|319925446|gb|ADV82521.1| glycoside hydrolase family 28 [Terriglobus saanensis SP1PR4]
Length = 460
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 39/75 (52%), Gaps = 4/75 (5%)
Query: 77 ERKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSN 136
E+ ++ +FG GDG T ++ A ++ + K G + G +L+GS + S
Sbjct: 27 EKSKTFNVTNFGAKGDGITLDSPAIQRTIDAAA----KSGGTVVFRAGTYLSGSIFVKSG 82
Query: 137 FTLFLERGAVMLGSQ 151
TL +++G +LGSQ
Sbjct: 83 VTLRVDKGVTILGSQ 97
>gi|115462973|ref|NP_001055086.1| Os05g0279900 [Oryza sativa Japonica Group]
gi|113578637|dbj|BAF17000.1| Os05g0279900 [Oryza sativa Japonica Group]
gi|125551651|gb|EAY97360.1| hypothetical protein OsI_19283 [Oryza sativa Indica Group]
gi|222630956|gb|EEE63088.1| hypothetical protein OsJ_17896 [Oryza sativa Japonica Group]
Length = 485
Score = 37.7 bits (86), Expect = 1.5, Method: Composition-based stats.
Identities = 18/31 (58%), Positives = 22/31 (70%), Gaps = 1/31 (3%)
Query: 76 PERKVAMSIKDFGGVGDGTTSNTEAFRKAVR 106
PE+ V ++ FG VGDGTT +TEAFR A R
Sbjct: 85 PEQCV-FDVRAFGAVGDGTTDDTEAFRAAWR 114
>gi|29349561|ref|NP_813064.1| exopolygalacturonase [Bacteroides thetaiotaomicron VPI-5482]
gi|29341471|gb|AAO79258.1| Exopolygalacturonase precursor [Bacteroides thetaiotaomicron
VPI-5482]
Length = 432
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 34/68 (50%), Gaps = 3/68 (4%)
Query: 83 SIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFLE 142
SI D+G D T T+ ++ + GG + +P+G +L+GS +N L LE
Sbjct: 48 SITDYGVANDSTVVQTKKIQEVIDLA---ARNGGGVIVIPKGTFLSGSLFFKNNTHLHLE 104
Query: 143 RGAVMLGS 150
AV+ GS
Sbjct: 105 EDAVLKGS 112
>gi|312960267|ref|ZP_07774778.1| glycoside hydrolase, family [Pseudomonas fluorescens WH6]
gi|311285489|gb|EFQ64059.1| glycoside hydrolase, family [Pseudomonas fluorescens WH6]
Length = 599
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 37/68 (54%), Gaps = 5/68 (7%)
Query: 84 IKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFLER 143
+K +G GDG +T A + A+ G ++ +P+G + +G+ L SN TL +
Sbjct: 153 VKRYGAKGDGIHLDTLAIQTAIDAC-----TPGCKVLLPKGTYKSGALYLKSNMTLEVAE 207
Query: 144 GAVMLGSQ 151
GA +LGS+
Sbjct: 208 GATLLGSE 215
>gi|260642181|ref|ZP_05414769.2| galacturan 1,4-alpha-galacturonidase [Bacteroides finegoldii DSM
17565]
gi|260623446|gb|EEX46317.1| polygalacturonase (pectinase) [Bacteroides finegoldii DSM 17565]
Length = 470
Score = 37.7 bits (86), Expect = 1.6, Method: Composition-based stats.
Identities = 25/81 (30%), Positives = 35/81 (43%), Gaps = 11/81 (13%)
Query: 70 LGDQYLPERKVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTG 129
LG QY I D+G V D TE + + GG + +P+G +L+G
Sbjct: 77 LGKQY--------RITDYGVVNDSAKLQTEQIQNVIDRA---AKNGGGVIVIPKGTFLSG 125
Query: 130 SFNLTSNFTLFLERGAVMLGS 150
S L+LE AV+ GS
Sbjct: 126 SLFFKPKTHLYLEENAVLKGS 146
>gi|46485878|gb|AAS98503.1| unknown protein [Oryza sativa Japonica Group]
Length = 504
Score = 37.7 bits (86), Expect = 1.6, Method: Composition-based stats.
Identities = 18/31 (58%), Positives = 22/31 (70%), Gaps = 1/31 (3%)
Query: 76 PERKVAMSIKDFGGVGDGTTSNTEAFRKAVR 106
PE+ V ++ FG VGDGTT +TEAFR A R
Sbjct: 85 PEQCV-FDVRAFGAVGDGTTDDTEAFRAAWR 114
>gi|373955264|ref|ZP_09615224.1| glycoside hydrolase family 28 [Mucilaginibacter paludis DSM 18603]
gi|373891864|gb|EHQ27761.1| glycoside hydrolase family 28 [Mucilaginibacter paludis DSM 18603]
Length = 549
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 37/66 (56%), Gaps = 3/66 (4%)
Query: 83 SIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFLE 142
+IK F GDG T NT + A+ +KGG + VP G+WLTG +L SN L ++
Sbjct: 41 NIKQFDAKGDGLTLNTNSINDAI---TSCSEKGGGVVLVPGGVWLTGPIDLKSNVNLHID 97
Query: 143 RGAVML 148
R ++L
Sbjct: 98 RDGILL 103
>gi|298482127|ref|ZP_07000315.1| galacturan 1,4-alpha-galacturonidase [Bacteroides sp. D22]
gi|298271684|gb|EFI13257.1| galacturan 1,4-alpha-galacturonidase [Bacteroides sp. D22]
Length = 436
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 33/68 (48%), Gaps = 3/68 (4%)
Query: 84 IKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFLER 143
I D+G V D T TE + + + GG + +PEG +L+G+ L LE+
Sbjct: 50 ITDYGVVNDSTLLQTEKIQAVIDLA---SNNGGGVVVIPEGTYLSGALFFKPGTHLHLEK 106
Query: 144 GAVMLGSQ 151
AV+ GS
Sbjct: 107 KAVLKGSD 114
>gi|403059816|ref|YP_006648033.1| glycoside hydrolase [Pectobacterium carotovorum subsp. carotovorum
PCC21]
gi|402807142|gb|AFR04780.1| glycoside hydrolase family 28 [Pectobacterium carotovorum subsp.
carotovorum PCC21]
Length = 444
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 36/68 (52%), Gaps = 3/68 (4%)
Query: 83 SIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLFLE 142
SI+ + DG T +T F++A+ + +GG L V G +L G L SNF L LE
Sbjct: 4 SIQSYSPAADGITPDTAIFQQAIDRIAA---QGGGTLTVEPGRYLLGGLLLPSNFCLQLE 60
Query: 143 RGAVMLGS 150
GA ++ S
Sbjct: 61 AGAELIVS 68
>gi|253689237|ref|YP_003018427.1| Fibronectin type III domain-containing protein [Pectobacterium
carotovorum subsp. carotovorum PC1]
gi|251755815|gb|ACT13891.1| Fibronectin type III domain protein [Pectobacterium carotovorum
subsp. carotovorum PC1]
Length = 659
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 39/70 (55%)
Query: 81 AMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEGLWLTGSFNLTSNFTLF 140
++++ ++G GDG ++T A +KA+ G ++ V G + TG+ L S+ T
Sbjct: 162 SLNVTNYGAKGDGIANDTLAIQKAIDDCTPTAYPKGCKVVVEGGTFKTGALFLHSDMTFE 221
Query: 141 LERGAVMLGS 150
+ +GA +LGS
Sbjct: 222 VAKGATLLGS 231
>gi|423239913|ref|ZP_17221028.1| hypothetical protein HMPREF1065_01651 [Bacteroides dorei
CL03T12C01]
gi|392644902|gb|EIY38636.1| hypothetical protein HMPREF1065_01651 [Bacteroides dorei
CL03T12C01]
Length = 515
Score = 37.7 bits (86), Expect = 1.7, Method: Composition-based stats.
Identities = 24/76 (31%), Positives = 37/76 (48%), Gaps = 7/76 (9%)
Query: 78 RKVAMSIKDFGGVGDGTTSNTEAFRKAVR--YMQGFGDKGGAQLNVPEGLWLTGSFNLTS 135
R +I DFG D +T+A +A+ Y QG G ++ +P G + TG+ L
Sbjct: 22 RTGEFNILDFGATRDTMMVHTKAINEAIESCYRQG-----GGRVVIPPGKFKTGTIFLKD 76
Query: 136 NFTLFLERGAVMLGSQ 151
N L L+ GA + S+
Sbjct: 77 NVELHLDNGACLYASE 92
>gi|423229081|ref|ZP_17215486.1| hypothetical protein HMPREF1063_01306 [Bacteroides dorei
CL02T00C15]
gi|423244921|ref|ZP_17225995.1| hypothetical protein HMPREF1064_02201 [Bacteroides dorei
CL02T12C06]
gi|392634834|gb|EIY28746.1| hypothetical protein HMPREF1063_01306 [Bacteroides dorei
CL02T00C15]
gi|392640962|gb|EIY34753.1| hypothetical protein HMPREF1064_02201 [Bacteroides dorei
CL02T12C06]
Length = 515
Score = 37.7 bits (86), Expect = 1.7, Method: Composition-based stats.
Identities = 24/76 (31%), Positives = 37/76 (48%), Gaps = 7/76 (9%)
Query: 78 RKVAMSIKDFGGVGDGTTSNTEAFRKAVR--YMQGFGDKGGAQLNVPEGLWLTGSFNLTS 135
R +I DFG D +T+A +A+ Y QG G ++ +P G + TG+ L
Sbjct: 22 RTGEFNILDFGATRDTMMVHTKAINEAIESCYRQG-----GGRVVIPPGKFKTGTIFLKD 76
Query: 136 NFTLFLERGAVMLGSQ 151
N L L+ GA + S+
Sbjct: 77 NVELHLDNGACLYASE 92
>gi|357128627|ref|XP_003565972.1| PREDICTED: probable polygalacturonase At1g80170-like [Brachypodium
distachyon]
Length = 445
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 27/46 (58%), Gaps = 2/46 (4%)
Query: 79 KVAMSIKDFGGVGDGTTSNTEAFRKAVRYMQGFGDKGGAQLNVPEG 124
+V +++ DFG VGDG ++T+AF A G GD LNVP G
Sbjct: 30 RVLLTLDDFGAVGDGIANDTQAFVDAWSAACGTGDT--TYLNVPAG 73
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.318 0.135 0.394
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,418,887,999
Number of Sequences: 23463169
Number of extensions: 98377430
Number of successful extensions: 199502
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 649
Number of HSP's successfully gapped in prelim test: 609
Number of HSP's that attempted gapping in prelim test: 198171
Number of HSP's gapped (non-prelim): 1333
length of query: 151
length of database: 8,064,228,071
effective HSP length: 114
effective length of query: 37
effective length of database: 9,684,394,101
effective search space: 358322581737
effective search space used: 358322581737
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 71 (32.0 bits)