Query 044615
Match_columns 571
No_of_seqs 660 out of 4594
Neff 9.8
Searched_HMMs 46136
Date Fri Mar 29 05:02:05 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/044615.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/044615hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN00113 leucine-rich repeat r 100.0 3.9E-56 8.4E-61 509.6 40.2 500 39-570 251-786 (968)
2 PLN00113 leucine-rich repeat r 100.0 3.8E-37 8.3E-42 352.9 23.9 301 46-354 138-444 (968)
3 KOG4194 Membrane glycoprotein 100.0 1.6E-35 3.6E-40 291.2 3.6 329 40-376 117-454 (873)
4 KOG4194 Membrane glycoprotein 100.0 5.4E-35 1.2E-39 287.6 3.9 323 51-374 81-429 (873)
5 KOG0444 Cytoskeletal regulator 100.0 6.2E-34 1.3E-38 281.9 -6.8 335 28-375 35-376 (1255)
6 KOG0444 Cytoskeletal regulator 99.9 2.9E-29 6.3E-34 248.9 -3.4 302 40-356 70-380 (1255)
7 KOG0472 Leucine-rich repeat pr 99.9 3E-29 6.5E-34 237.1 -7.6 328 37-374 103-541 (565)
8 KOG0472 Leucine-rich repeat pr 99.9 4.4E-28 9.6E-33 229.2 -3.9 269 65-351 182-541 (565)
9 PLN03210 Resistant to P. syrin 99.9 3E-22 6.6E-27 230.5 24.6 310 41-372 551-904 (1153)
10 KOG0618 Serine/threonine phosp 99.9 1.6E-25 3.5E-30 232.3 -5.4 210 170-384 242-499 (1081)
11 KOG4237 Extracellular matrix p 99.9 1E-24 2.2E-29 206.4 -3.1 285 88-375 60-360 (498)
12 PLN03210 Resistant to P. syrin 99.9 2.6E-21 5.6E-26 222.8 23.3 289 41-349 581-904 (1153)
13 KOG0618 Serine/threonine phosp 99.9 1.3E-23 2.9E-28 218.2 -1.5 300 40-350 172-488 (1081)
14 PRK15387 E3 ubiquitin-protein 99.9 4.5E-21 9.8E-26 205.6 17.4 259 49-356 202-463 (788)
15 KOG4237 Extracellular matrix p 99.9 4.8E-24 1E-28 201.8 -5.5 291 53-353 51-361 (498)
16 KOG1187 Serine/threonine prote 99.9 2.9E-21 6.4E-26 193.3 13.2 119 449-571 62-181 (361)
17 PRK15387 E3 ubiquitin-protein 99.9 9.5E-21 2E-25 203.1 16.4 255 36-337 212-468 (788)
18 PRK15370 E3 ubiquitin-protein 99.8 7.2E-20 1.6E-24 197.6 13.1 245 68-351 180-428 (754)
19 cd00116 LRR_RI Leucine-rich re 99.8 9.4E-21 2E-25 189.9 4.0 274 70-349 2-318 (319)
20 PRK15370 E3 ubiquitin-protein 99.8 1.2E-19 2.5E-24 196.1 12.1 245 48-328 178-429 (754)
21 cd00116 LRR_RI Leucine-rich re 99.8 2.4E-20 5.1E-25 187.0 1.7 260 63-326 20-319 (319)
22 KOG0617 Ras suppressor protein 99.8 7.5E-21 1.6E-25 160.3 -3.9 161 88-255 25-186 (264)
23 KOG0595 Serine/threonine-prote 99.7 7.3E-18 1.6E-22 161.4 9.4 97 459-556 7-104 (429)
24 KOG0617 Ras suppressor protein 99.7 8.8E-20 1.9E-24 153.8 -4.9 163 64-240 31-194 (264)
25 KOG0615 Serine/threonine prote 99.6 5.5E-16 1.2E-20 148.5 8.3 95 461-555 171-270 (475)
26 KOG0192 Tyrosine kinase specif 99.6 1.2E-15 2.6E-20 152.0 10.4 104 466-571 45-149 (362)
27 KOG0194 Protein tyrosine kinas 99.6 3.1E-15 6.7E-20 151.2 9.3 113 456-570 151-268 (474)
28 KOG1026 Nerve growth factor re 99.6 6.7E-15 1.4E-19 153.9 10.3 107 462-570 486-609 (774)
29 KOG0575 Polo-like serine/threo 99.6 7.4E-15 1.6E-19 147.9 9.3 94 462-555 18-112 (592)
30 KOG0611 Predicted serine/threo 99.6 1.7E-15 3.7E-20 144.4 4.0 95 462-556 53-148 (668)
31 KOG0196 Tyrosine kinase, EPH ( 99.5 5.9E-15 1.3E-19 151.7 6.5 102 464-569 631-736 (996)
32 KOG0197 Tyrosine kinases [Sign 99.5 1.1E-14 2.4E-19 144.9 7.9 100 465-569 209-308 (468)
33 KOG0598 Ribosomal protein S6 k 99.5 1.1E-14 2.3E-19 138.6 7.2 96 461-556 24-120 (357)
34 KOG0605 NDR and related serine 99.5 1.8E-14 3.9E-19 142.9 8.8 105 460-565 139-244 (550)
35 KOG0580 Serine/threonine prote 99.5 9.2E-15 2E-19 130.5 3.4 95 460-554 20-115 (281)
36 KOG0591 NIMA (never in mitosis 99.5 2.1E-15 4.5E-20 137.5 -2.2 92 462-554 19-113 (375)
37 PLN03150 hypothetical protein; 99.5 2.2E-13 4.8E-18 147.0 12.2 117 268-385 420-538 (623)
38 KOG1094 Discoidin domain recep 99.5 6.5E-14 1.4E-18 139.6 5.7 93 462-556 538-630 (807)
39 KOG0597 Serine-threonine prote 99.4 1.2E-13 2.7E-18 137.2 5.4 93 462-556 2-95 (808)
40 KOG0581 Mitogen-activated prot 99.4 5.7E-13 1.2E-17 126.9 9.1 90 464-555 81-172 (364)
41 KOG0600 Cdc2-related protein k 99.4 2.7E-13 5.8E-18 133.5 6.8 92 462-555 117-211 (560)
42 KOG3653 Transforming growth fa 99.4 6.2E-13 1.3E-17 129.9 9.2 97 463-570 211-313 (534)
43 KOG0616 cAMP-dependent protein 99.4 3.8E-13 8.1E-18 123.9 7.0 95 462-556 44-139 (355)
44 KOG0659 Cdk activating kinase 99.4 2.8E-13 6E-18 122.9 6.0 92 463-556 3-95 (318)
45 cd05599 STKc_NDR_like Catalyti 99.4 9.1E-13 2E-17 134.6 9.8 94 462-555 1-95 (364)
46 cd05626 STKc_LATS2 Catalytic d 99.4 1.2E-12 2.7E-17 134.4 10.8 93 463-555 2-95 (381)
47 cd05612 STKc_PRKX_like Catalyt 99.4 6.7E-13 1.5E-17 131.1 8.2 104 462-568 1-105 (291)
48 KOG0532 Leucine-rich repeat (L 99.4 2E-14 4.4E-19 143.0 -2.9 176 124-310 78-253 (722)
49 KOG0032 Ca2+/calmodulin-depend 99.4 1.1E-12 2.4E-17 131.9 9.3 95 461-555 34-130 (382)
50 cd05629 STKc_NDR_like_fungal C 99.4 1.5E-12 3.2E-17 133.6 10.4 94 462-555 1-95 (377)
51 cd05064 PTKc_EphR_A10 Catalyti 99.4 2.2E-12 4.8E-17 125.6 11.0 105 462-570 5-113 (266)
52 cd05600 STKc_Sid2p_Dbf2p Catal 99.4 1.6E-12 3.4E-17 131.1 10.3 103 462-567 1-104 (333)
53 cd05628 STKc_NDR1 Catalytic do 99.4 1.7E-12 3.7E-17 132.4 10.5 104 462-568 1-105 (363)
54 cd05605 STKc_GRK4_like Catalyt 99.4 2.3E-12 4.9E-17 126.9 10.5 107 463-570 1-108 (285)
55 KOG0583 Serine/threonine prote 99.4 1.7E-12 3.6E-17 130.7 9.5 97 460-556 15-115 (370)
56 cd05631 STKc_GRK4 Catalytic do 99.4 2.6E-12 5.5E-17 126.5 10.6 106 464-570 2-108 (285)
57 PTZ00263 protein kinase A cata 99.4 1.9E-12 4.2E-17 130.1 9.7 94 462-555 18-112 (329)
58 cd05114 PTKc_Tec_Rlk Catalytic 99.4 2.9E-12 6.2E-17 124.0 10.5 103 462-570 4-106 (256)
59 PHA02988 hypothetical protein; 99.4 4.1E-12 8.8E-17 124.9 11.6 100 467-570 25-128 (283)
60 cd05598 STKc_LATS Catalytic do 99.4 2.6E-12 5.6E-17 131.8 10.4 94 462-555 1-95 (376)
61 KOG0586 Serine/threonine prote 99.3 2.9E-12 6.2E-17 129.5 9.8 97 459-556 53-150 (596)
62 PRK13184 pknD serine/threonine 99.3 5E-12 1.1E-16 138.3 12.2 109 462-570 2-119 (932)
63 PTZ00426 cAMP-dependent protei 99.3 3E-12 6.5E-17 129.2 9.8 104 462-568 30-135 (340)
64 cd05104 PTKc_Kit Catalytic dom 99.3 2.8E-12 6E-17 131.3 9.4 92 461-554 34-132 (375)
65 cd05096 PTKc_DDR1 Catalytic do 99.3 5.4E-12 1.2E-16 125.5 11.2 91 462-554 5-112 (304)
66 cd05625 STKc_LATS1 Catalytic d 99.3 3E-12 6.5E-17 131.6 9.6 93 463-555 2-95 (382)
67 KOG1095 Protein tyrosine kinas 99.3 2.8E-12 6.1E-17 139.4 9.3 106 463-570 693-808 (1025)
68 cd05597 STKc_DMPK_like Catalyt 99.3 4.3E-12 9.4E-17 127.7 10.2 93 462-554 1-94 (331)
69 cd05105 PTKc_PDGFR_alpha Catal 99.3 5.6E-12 1.2E-16 129.6 11.0 92 461-554 36-134 (400)
70 KOG0663 Protein kinase PITSLRE 99.3 9.2E-13 2E-17 123.3 4.5 95 459-555 73-170 (419)
71 KOG0593 Predicted protein kina 99.3 6.4E-13 1.4E-17 122.7 3.2 90 462-553 2-92 (396)
72 cd05624 STKc_MRCK_beta Catalyt 99.3 5.6E-12 1.2E-16 126.9 10.2 93 462-554 1-94 (331)
73 COG4886 Leucine-rich repeat (L 99.3 3.2E-12 6.9E-17 131.9 8.2 199 101-309 97-296 (394)
74 KOG0610 Putative serine/threon 99.3 2.4E-12 5.2E-17 124.0 6.6 95 463-557 78-173 (459)
75 cd05627 STKc_NDR2 Catalytic do 99.3 6.4E-12 1.4E-16 128.1 10.3 94 462-555 1-95 (360)
76 cd05571 STKc_PKB Catalytic dom 99.3 7.8E-12 1.7E-16 125.4 10.7 99 468-569 1-100 (323)
77 cd05621 STKc_ROCK2 Catalytic d 99.3 4.8E-12 1E-16 129.2 9.3 96 460-555 41-137 (370)
78 cd05595 STKc_PKB_beta Catalyti 99.3 7.3E-12 1.6E-16 125.6 10.5 99 468-569 1-100 (323)
79 PF07714 Pkinase_Tyr: Protein 99.3 5E-12 1.1E-16 122.5 9.0 102 466-570 3-109 (259)
80 KOG0532 Leucine-rich repeat (L 99.3 1E-13 2.3E-18 138.0 -3.0 172 67-255 76-247 (722)
81 cd05601 STKc_CRIK Catalytic do 99.3 6.9E-12 1.5E-16 126.3 10.0 104 462-567 1-105 (330)
82 cd05113 PTKc_Btk_Bmx Catalytic 99.3 7.6E-12 1.7E-16 121.1 9.8 103 462-570 4-106 (256)
83 KOG0588 Serine/threonine prote 99.3 2.7E-12 5.8E-17 130.4 6.7 97 461-557 11-108 (786)
84 cd05068 PTKc_Frk_like Catalyti 99.3 1E-11 2.2E-16 120.5 10.6 104 462-570 6-109 (261)
85 cd05593 STKc_PKB_gamma Catalyt 99.3 1.2E-11 2.6E-16 124.3 11.3 99 468-569 1-100 (328)
86 cd08224 STKc_Nek6_Nek7 Catalyt 99.3 1.5E-11 3.3E-16 119.6 11.7 109 462-570 2-112 (267)
87 COG4886 Leucine-rich repeat (L 99.3 4.1E-12 9E-17 131.1 8.1 200 124-333 96-296 (394)
88 cd05585 STKc_YPK1_like Catalyt 99.3 7.9E-12 1.7E-16 124.7 9.8 97 470-569 1-98 (312)
89 cd08228 STKc_Nek6 Catalytic do 99.3 1.6E-11 3.4E-16 119.6 11.7 108 462-569 2-111 (267)
90 cd06649 PKc_MEK2 Catalytic dom 99.3 1.6E-11 3.4E-16 123.6 12.1 92 462-555 5-97 (331)
91 KOG0589 Serine/threonine prote 99.3 1.6E-12 3.5E-17 129.1 4.7 108 462-570 4-118 (426)
92 cd06650 PKc_MEK1 Catalytic dom 99.3 1.6E-11 3.5E-16 123.7 12.0 92 462-555 5-97 (333)
93 cd05033 PTKc_EphR Catalytic do 99.3 1.5E-11 3.3E-16 119.6 11.4 105 462-570 4-112 (266)
94 cd05588 STKc_aPKC Catalytic do 99.3 1.3E-11 2.9E-16 124.0 11.2 100 468-570 1-102 (329)
95 cd05573 STKc_ROCK_NDR_like Cat 99.3 5E-12 1.1E-16 128.4 8.2 104 462-568 1-105 (350)
96 cd05072 PTKc_Lyn Catalytic dom 99.3 9.4E-12 2E-16 120.8 9.7 104 462-570 6-109 (261)
97 cd05596 STKc_ROCK Catalytic do 99.3 5.4E-12 1.2E-16 128.9 8.3 95 461-555 42-137 (370)
98 cd05148 PTKc_Srm_Brk Catalytic 99.3 7E-12 1.5E-16 121.6 8.6 107 460-570 4-110 (261)
99 cd05608 STKc_GRK1 Catalytic do 99.3 1.3E-11 2.7E-16 121.3 10.4 101 470-570 1-103 (280)
100 KOG4250 TANK binding protein k 99.3 2.1E-12 4.5E-17 132.4 4.9 97 464-562 15-118 (732)
101 cd05102 PTKc_VEGFR3 Catalytic 99.3 8.6E-12 1.9E-16 126.0 9.3 91 462-554 7-105 (338)
102 cd05632 STKc_GRK5 Catalytic do 99.3 1.9E-11 4.1E-16 120.3 11.2 106 464-570 2-108 (285)
103 cd08229 STKc_Nek7 Catalytic do 99.3 1.1E-11 2.5E-16 120.6 9.6 109 462-570 2-112 (267)
104 PLN03150 hypothetical protein; 99.3 2.6E-11 5.7E-16 131.0 13.2 113 243-355 419-532 (623)
105 cd05059 PTKc_Tec_like Catalyti 99.3 1.6E-11 3.5E-16 118.8 10.2 102 463-570 5-106 (256)
106 cd05594 STKc_PKB_alpha Catalyt 99.3 1.8E-11 3.9E-16 122.9 10.9 99 468-569 1-100 (325)
107 cd05630 STKc_GRK6 Catalytic do 99.3 2.2E-11 4.7E-16 119.9 11.3 106 464-570 2-108 (285)
108 cd05623 STKc_MRCK_alpha Cataly 99.3 1.3E-11 2.8E-16 124.4 9.8 103 462-566 1-104 (332)
109 cd06615 PKc_MEK Catalytic doma 99.3 2.8E-11 6E-16 120.6 12.1 92 462-555 1-93 (308)
110 cd05622 STKc_ROCK1 Catalytic d 99.3 7.8E-12 1.7E-16 127.7 8.2 100 456-555 37-137 (371)
111 cd05589 STKc_PKN Catalytic dom 99.3 1.4E-11 3.1E-16 123.6 9.9 103 464-570 1-107 (324)
112 cd05107 PTKc_PDGFR_beta Cataly 99.3 1.7E-11 3.6E-16 126.1 10.4 91 462-554 37-134 (401)
113 cd05066 PTKc_EphR_A Catalytic 99.3 2.4E-11 5.2E-16 118.3 11.0 105 462-570 4-112 (267)
114 KOG0592 3-phosphoinositide-dep 99.3 3.2E-12 7E-17 127.0 4.8 99 458-556 69-169 (604)
115 cd05580 STKc_PKA Catalytic dom 99.3 2.1E-11 4.5E-16 120.4 10.6 105 462-569 1-106 (290)
116 cd06646 STKc_MAP4K5 Catalytic 99.3 3.2E-11 6.8E-16 117.5 11.8 102 462-569 9-111 (267)
117 KOG0582 Ste20-like serine/thre 99.3 1.3E-11 2.8E-16 120.0 8.6 92 461-554 25-117 (516)
118 cd05607 STKc_GRK7 Catalytic do 99.3 2.3E-11 4.9E-16 119.2 10.3 100 470-570 1-101 (277)
119 cd05067 PTKc_Lck_Blk Catalytic 99.3 2.7E-11 5.9E-16 117.5 10.8 103 462-570 6-108 (260)
120 cd05034 PTKc_Src_like Catalyti 99.3 3.2E-11 6.9E-16 117.0 11.1 105 461-570 5-109 (261)
121 KOG4278 Protein tyrosine kinas 99.3 3.3E-12 7.1E-17 128.3 4.0 91 461-555 266-357 (1157)
122 KOG1025 Epidermal growth facto 99.3 1E-12 2.2E-17 136.0 0.4 100 464-566 698-806 (1177)
123 KOG0198 MEKK and related serin 99.2 1.4E-11 3E-16 119.3 8.1 93 462-557 17-112 (313)
124 cd06622 PKc_MAPKK_PBS2_like Ca 99.2 1.9E-11 4.2E-16 120.3 9.3 106 463-570 2-108 (286)
125 cd08221 STKc_Nek9 Catalytic do 99.2 4.6E-11 1E-15 115.5 11.8 106 463-570 1-107 (256)
126 cd05084 PTKc_Fes Catalytic dom 99.2 3.5E-11 7.6E-16 116.1 10.9 99 468-570 1-100 (252)
127 cd08529 STKc_FA2-like Catalyti 99.2 3.5E-11 7.7E-16 116.2 10.8 106 463-570 1-107 (256)
128 cd06631 STKc_YSK4 Catalytic do 99.2 5E-11 1.1E-15 115.9 11.8 103 463-568 1-106 (265)
129 cd05587 STKc_cPKC Catalytic do 99.2 2.8E-11 6E-16 121.5 10.3 104 463-569 1-106 (324)
130 cd06624 STKc_ASK Catalytic dom 99.2 3.1E-11 6.8E-16 117.6 10.3 94 459-555 5-99 (268)
131 cd05618 STKc_aPKC_iota Catalyt 99.2 4E-11 8.8E-16 120.5 11.4 99 468-569 1-101 (329)
132 KOG0661 MAPK related serine/th 99.2 1.7E-12 3.7E-17 127.0 1.2 100 462-566 10-112 (538)
133 KOG1909 Ran GTPase-activating 99.2 1.9E-12 4.1E-17 122.1 1.4 247 93-351 26-311 (382)
134 cd05106 PTKc_CSF-1R Catalytic 99.2 2E-11 4.3E-16 124.9 8.8 93 460-554 36-135 (374)
135 KOG4717 Serine/threonine prote 99.2 8.9E-12 1.9E-16 122.7 5.9 96 462-558 18-114 (864)
136 KOG0585 Ca2+/calmodulin-depend 99.2 1.7E-11 3.8E-16 119.9 7.8 90 460-549 95-198 (576)
137 cd05065 PTKc_EphR_B Catalytic 99.2 4.4E-11 9.6E-16 116.6 10.9 105 462-570 4-112 (269)
138 cd06620 PKc_MAPKK_Byr1_like Ca 99.2 3.5E-11 7.5E-16 118.4 9.9 103 462-569 5-108 (284)
139 cd06630 STKc_MEKK1 Catalytic d 99.2 4.2E-11 9.2E-16 116.6 10.4 104 463-569 1-108 (268)
140 cd05615 STKc_cPKC_alpha Cataly 99.2 3.3E-11 7.2E-16 120.8 9.8 105 463-570 1-107 (323)
141 cd05085 PTKc_Fer Catalytic dom 99.2 6.3E-11 1.4E-15 114.1 11.3 99 468-570 1-99 (250)
142 cd05578 STKc_Yank1 Catalytic d 99.2 2E-11 4.2E-16 118.3 7.8 104 463-569 1-105 (258)
143 cd05591 STKc_nPKC_epsilon Cata 99.2 3.9E-11 8.4E-16 120.3 10.1 99 468-569 1-101 (321)
144 cd05570 STKc_PKC Catalytic dom 99.2 3.9E-11 8.4E-16 120.1 10.0 100 468-570 1-102 (318)
145 cd08227 PK_STRAD_alpha Pseudok 99.2 5.4E-11 1.2E-15 119.6 11.1 103 466-570 2-107 (327)
146 cd05619 STKc_nPKC_theta Cataly 99.2 4.3E-11 9.3E-16 119.6 10.3 99 468-569 1-101 (316)
147 cd05609 STKc_MAST Catalytic do 99.2 5.9E-11 1.3E-15 118.1 11.2 103 463-568 2-105 (305)
148 cd05582 STKc_RSK_N N-terminal 99.2 4.3E-11 9.2E-16 119.8 10.2 98 468-569 2-103 (318)
149 cd05081 PTKc_Jak2_Jak3_rpt2 Ca 99.2 5.2E-11 1.1E-15 117.1 10.6 104 462-570 4-114 (284)
150 cd05090 PTKc_Ror1 Catalytic do 99.2 6.3E-11 1.4E-15 116.5 11.1 91 462-554 5-100 (283)
151 KOG2052 Activin A type IB rece 99.2 3.5E-11 7.6E-16 116.9 8.9 86 463-555 212-303 (513)
152 cd05076 PTK_Tyk2_rpt1 Pseudoki 99.2 2.7E-11 5.9E-16 118.5 8.4 97 469-570 2-123 (274)
153 cd05616 STKc_cPKC_beta Catalyt 99.2 5.4E-11 1.2E-15 119.3 10.6 104 463-569 1-106 (323)
154 cd05590 STKc_nPKC_eta Catalyti 99.2 3.8E-11 8.3E-16 120.2 9.5 99 468-569 1-101 (320)
155 cd05617 STKc_aPKC_zeta Catalyt 99.2 5.9E-11 1.3E-15 119.2 10.8 100 468-570 1-102 (327)
156 cd05070 PTKc_Fyn_Yrk Catalytic 99.2 6.5E-11 1.4E-15 114.8 10.8 103 462-570 6-108 (260)
157 cd06629 STKc_MAPKKK_Bck1_like 99.2 6.1E-11 1.3E-15 115.8 10.5 104 463-569 2-113 (272)
158 cd07871 STKc_PCTAIRE3 Catalyti 99.2 7.8E-11 1.7E-15 116.1 11.4 102 462-568 5-107 (288)
159 cd05046 PTK_CCK4 Pseudokinase 99.2 5.7E-11 1.2E-15 116.2 10.3 107 462-570 5-123 (275)
160 cd05112 PTKc_Itk Catalytic dom 99.2 7.2E-11 1.6E-15 114.1 10.9 102 462-569 4-105 (256)
161 cd05062 PTKc_IGF-1R Catalytic 99.2 6.4E-11 1.4E-15 116.0 10.6 109 460-570 4-125 (277)
162 cd07848 STKc_CDKL5 Catalytic d 99.2 4.5E-11 9.8E-16 117.7 9.6 104 462-569 1-105 (287)
163 cd05088 PTKc_Tie2 Catalytic do 99.2 6.7E-11 1.5E-15 117.5 10.9 107 462-570 7-130 (303)
164 cd05052 PTKc_Abl Catalytic dom 99.2 4.8E-11 1E-15 116.0 9.6 103 463-570 7-110 (263)
165 cd06610 STKc_OSR1_SPAK Catalyt 99.2 1E-10 2.2E-15 113.7 12.0 106 462-569 1-107 (267)
166 cd05071 PTKc_Src Catalytic dom 99.2 5.9E-11 1.3E-15 115.2 10.2 103 462-570 6-108 (262)
167 cd05039 PTKc_Csk_like Catalyti 99.2 8.1E-11 1.8E-15 113.8 11.0 103 462-570 6-108 (256)
168 cd06611 STKc_SLK_like Catalyti 99.2 3.7E-11 8E-16 117.9 8.7 104 462-570 5-109 (280)
169 cd06641 STKc_MST3 Catalytic do 99.2 1.2E-10 2.6E-15 114.1 12.3 101 464-570 6-107 (277)
170 cd08218 STKc_Nek1 Catalytic do 99.2 8.7E-11 1.9E-15 113.6 11.1 105 463-569 1-106 (256)
171 cd07861 STKc_CDK1_euk Catalyti 99.2 1E-10 2.2E-15 115.0 11.7 105 463-569 1-106 (285)
172 cd05063 PTKc_EphR_A2 Catalytic 99.2 8.7E-11 1.9E-15 114.4 11.1 105 462-570 5-113 (268)
173 cd05073 PTKc_Hck Catalytic dom 99.2 6.4E-11 1.4E-15 114.9 10.0 103 462-570 6-108 (260)
174 cd07869 STKc_PFTAIRE1 Catalyti 99.2 1.1E-10 2.3E-15 116.0 11.8 92 461-555 4-96 (303)
175 cd06656 STKc_PAK3 Catalytic do 99.2 1E-10 2.2E-15 115.8 11.5 101 462-569 19-120 (297)
176 cd05050 PTKc_Musk Catalytic do 99.2 8.2E-11 1.8E-15 116.0 10.8 92 461-554 4-101 (288)
177 cd05036 PTKc_ALK_LTK Catalytic 99.2 7.9E-11 1.7E-15 115.4 10.6 108 461-570 5-122 (277)
178 cd05049 PTKc_Trk Catalytic dom 99.2 5.6E-11 1.2E-15 116.6 9.5 106 462-569 5-127 (280)
179 KOG0574 STE20-like serine/thre 99.2 3.2E-12 7E-17 117.7 0.5 88 464-556 35-123 (502)
180 cd05097 PTKc_DDR_like Catalyti 99.2 7.7E-11 1.7E-15 116.6 10.4 107 462-570 5-135 (295)
181 cd08220 STKc_Nek8 Catalytic do 99.2 1.2E-10 2.5E-15 112.6 11.5 106 463-570 1-107 (256)
182 cd05575 STKc_SGK Catalytic dom 99.2 7.8E-11 1.7E-15 118.2 10.5 98 468-568 1-100 (323)
183 cd05574 STKc_phototropin_like 99.2 1.1E-10 2.4E-15 116.7 11.6 106 463-569 2-108 (316)
184 cd05610 STKc_MASTL Catalytic d 99.2 9.7E-11 2.1E-15 128.3 12.0 105 462-569 4-109 (669)
185 cd05577 STKc_GRK Catalytic dom 99.2 9.1E-11 2E-15 114.9 10.5 99 470-569 1-100 (277)
186 cd08225 STKc_Nek5 Catalytic do 99.2 6.8E-11 1.5E-15 114.3 9.4 106 463-570 1-107 (257)
187 cd06625 STKc_MEKK3_like Cataly 99.2 1.4E-10 3E-15 112.6 11.6 94 462-555 2-98 (263)
188 cd06632 STKc_MEKK1_plant Catal 99.2 1.5E-10 3.4E-15 111.8 11.9 103 464-569 2-107 (258)
189 cd07846 STKc_CDKL2_3 Catalytic 99.2 4.6E-11 1E-15 117.6 8.3 105 462-570 1-106 (286)
190 PTZ00267 NIMA-related protein 99.2 7.8E-11 1.7E-15 124.5 10.5 104 463-569 68-174 (478)
191 cd06652 STKc_MEKK2 Catalytic d 99.2 1.6E-10 3.4E-15 112.4 11.8 105 462-569 2-111 (265)
192 cd07836 STKc_Pho85 Catalytic d 99.2 1.2E-10 2.6E-15 114.4 11.2 105 463-570 1-106 (284)
193 cd05061 PTKc_InsR Catalytic do 99.2 1.1E-10 2.4E-15 115.0 10.9 92 461-554 5-102 (288)
194 cd05604 STKc_SGK3 Catalytic do 99.2 9.3E-11 2E-15 117.7 10.5 98 468-568 1-100 (325)
195 cd05592 STKc_nPKC_theta_delta 99.2 8.9E-11 1.9E-15 117.3 10.2 88 468-555 1-90 (316)
196 cd07841 STKc_CDK7 Catalytic do 99.2 1.1E-10 2.3E-15 115.7 10.8 105 463-570 1-108 (298)
197 cd05055 PTKc_PDGFR Catalytic d 99.2 1.1E-10 2.3E-15 116.0 10.7 106 462-570 35-147 (302)
198 cd06654 STKc_PAK1 Catalytic do 99.2 1.4E-10 3.1E-15 114.7 11.6 102 462-570 20-122 (296)
199 cd08219 STKc_Nek3 Catalytic do 99.2 1.7E-10 3.7E-15 111.4 11.9 90 463-554 1-91 (255)
200 cd05103 PTKc_VEGFR2 Catalytic 99.2 6.4E-11 1.4E-15 119.8 9.2 91 462-554 7-105 (343)
201 KOG0577 Serine/threonine prote 99.2 8.7E-12 1.9E-16 124.8 2.7 89 464-553 28-117 (948)
202 PTZ00266 NIMA-related protein 99.2 1E-10 2.2E-15 128.7 11.3 110 460-570 11-124 (1021)
203 cd05098 PTKc_FGFR1 Catalytic d 99.2 1.2E-10 2.5E-15 116.1 10.9 107 462-570 18-146 (307)
204 cd05079 PTKc_Jak1_rpt2 Catalyt 99.2 1.2E-10 2.7E-15 114.5 10.9 104 463-570 5-115 (284)
205 cd06644 STKc_STK10_LOK Catalyt 99.2 1.1E-10 2.4E-15 115.3 10.6 104 462-570 12-116 (292)
206 cd05038 PTKc_Jak_rpt2 Catalyti 99.2 1.4E-10 3E-15 113.9 11.2 105 462-570 4-115 (284)
207 PLN00034 mitogen-activated pro 99.2 6.2E-11 1.3E-15 120.5 8.9 87 463-551 75-162 (353)
208 KOG0201 Serine/threonine prote 99.2 9.1E-12 2E-16 120.9 2.6 92 463-556 14-106 (467)
209 KOG1259 Nischarin, modulator o 99.2 5.9E-12 1.3E-16 116.2 1.1 131 218-354 284-415 (490)
210 PF00069 Pkinase: Protein kina 99.2 5.3E-11 1.1E-15 115.3 7.9 103 464-570 1-104 (260)
211 cd05603 STKc_SGK2 Catalytic do 99.2 1E-10 2.2E-15 117.3 10.1 88 468-555 1-90 (321)
212 cd05584 STKc_p70S6K Catalytic 99.2 9.3E-11 2E-15 117.6 9.9 88 468-555 2-94 (323)
213 cd05087 PTKc_Aatyk1_Aatyk3 Cat 99.2 1.2E-10 2.7E-15 113.5 10.4 99 468-568 1-104 (269)
214 KOG3207 Beta-tubulin folding c 99.2 4.4E-12 9.4E-17 122.9 0.1 184 94-278 118-313 (505)
215 cd06645 STKc_MAP4K3 Catalytic 99.2 8.9E-11 1.9E-15 114.3 9.4 102 462-569 9-111 (267)
216 cd06638 STKc_myosinIIIA Cataly 99.2 6.9E-11 1.5E-15 116.3 8.5 112 453-568 9-128 (286)
217 cd05069 PTKc_Yes Catalytic dom 99.2 1.6E-10 3.4E-15 112.1 10.8 102 463-570 7-108 (260)
218 cd07847 STKc_CDKL1_4 Catalytic 99.2 1.6E-10 3.4E-15 113.7 10.9 105 462-570 1-106 (286)
219 cd05108 PTKc_EGFR Catalytic do 99.2 1.6E-10 3.5E-15 115.5 11.0 104 462-570 7-115 (316)
220 KOG1909 Ran GTPase-activating 99.2 6.1E-12 1.3E-16 118.7 0.6 247 116-373 25-310 (382)
221 cd07832 STKc_CCRK Catalytic do 99.2 2E-10 4.3E-15 113.0 11.3 104 463-570 1-105 (286)
222 KOG0694 Serine/threonine prote 99.2 4.6E-11 1E-15 122.3 6.8 94 460-553 366-461 (694)
223 cd06643 STKc_SLK Catalytic dom 99.2 1.3E-10 2.9E-15 114.1 9.9 102 464-570 7-109 (282)
224 cd06628 STKc_MAPKKK_Byr2_like 99.2 3E-10 6.5E-15 110.5 12.3 103 464-569 2-111 (267)
225 cd05095 PTKc_DDR2 Catalytic do 99.2 1.7E-10 3.7E-15 114.2 10.7 107 462-570 5-136 (296)
226 cd05620 STKc_nPKC_delta Cataly 99.2 1.4E-10 3E-15 116.0 10.1 98 468-568 1-100 (316)
227 cd06609 STKc_MST3_like Catalyt 99.2 2E-10 4.3E-15 112.3 11.0 101 463-569 2-103 (274)
228 cd05032 PTKc_InsR_like Catalyt 99.1 1.6E-10 3.6E-15 113.0 10.3 107 462-570 6-125 (277)
229 KOG0612 Rho-associated, coiled 99.1 3.9E-12 8.5E-17 136.3 -1.3 108 457-565 70-178 (1317)
230 cd06623 PKc_MAPKK_plant_like C 99.1 2.9E-10 6.3E-15 110.3 11.9 102 463-569 2-104 (264)
231 cd05048 PTKc_Ror Catalytic Dom 99.1 2.1E-10 4.6E-15 112.7 11.1 92 462-555 5-102 (283)
232 cd05093 PTKc_TrkB Catalytic do 99.1 1.5E-10 3.2E-15 114.2 10.0 106 462-570 5-126 (288)
233 cd05057 PTKc_EGFR_like Catalyt 99.1 2.7E-10 5.8E-15 111.7 11.8 104 462-570 7-115 (279)
234 cd05040 PTKc_Ack_like Catalyti 99.1 1.8E-10 3.9E-15 111.4 10.4 99 468-570 1-103 (257)
235 cd05053 PTKc_FGFR Catalytic do 99.1 1.5E-10 3.2E-15 114.4 10.0 108 461-570 11-138 (293)
236 KOG0662 Cyclin-dependent kinas 99.1 1.8E-11 4E-16 104.6 2.9 90 463-554 3-93 (292)
237 cd06640 STKc_MST4 Catalytic do 99.1 2E-10 4.3E-15 112.5 10.7 90 463-554 5-95 (277)
238 cd06626 STKc_MEKK4 Catalytic d 99.1 3.1E-10 6.7E-15 110.2 11.9 103 463-569 1-104 (264)
239 cd05614 STKc_MSK2_N N-terminal 99.1 1.6E-10 3.6E-15 116.4 10.2 103 463-568 1-109 (332)
240 cd06619 PKc_MKK5 Catalytic dom 99.1 3.5E-10 7.6E-15 110.9 12.2 87 463-551 2-89 (279)
241 cd07872 STKc_PCTAIRE2 Catalyti 99.1 2.5E-10 5.4E-15 113.8 11.3 103 462-569 6-109 (309)
242 cd06637 STKc_TNIK Catalytic do 99.1 1.7E-10 3.6E-15 112.7 9.8 106 460-570 4-117 (272)
243 cd06655 STKc_PAK2 Catalytic do 99.1 2.4E-10 5.2E-15 113.1 11.0 102 462-570 19-121 (296)
244 cd06651 STKc_MEKK3 Catalytic d 99.1 4.2E-10 9E-15 109.5 12.5 105 462-569 2-111 (266)
245 cd06607 STKc_TAO Catalytic dom 99.1 2.4E-10 5.3E-15 113.7 11.0 106 462-570 15-121 (307)
246 cd06639 STKc_myosinIIIB Cataly 99.1 1.5E-10 3.3E-15 114.3 9.3 113 454-570 14-134 (291)
247 cd05043 PTK_Ryk Pseudokinase d 99.1 2.8E-10 6E-15 111.7 11.1 108 461-570 5-123 (280)
248 cd06614 STKc_PAK Catalytic dom 99.1 2.5E-10 5.4E-15 112.4 10.8 105 460-570 17-122 (286)
249 cd06647 STKc_PAK_I Catalytic d 99.1 2.1E-10 4.6E-15 113.3 10.2 101 462-569 19-120 (293)
250 cd07873 STKc_PCTAIRE1 Catalyti 99.1 3.1E-10 6.7E-15 112.7 11.4 102 462-568 6-108 (301)
251 cd06635 STKc_TAO1 Catalytic do 99.1 3.4E-10 7.3E-15 113.3 11.8 104 464-570 27-131 (317)
252 cd07859 STKc_TDY_MAPK_plant Ca 99.1 2.2E-10 4.9E-15 115.7 10.6 103 463-570 1-109 (338)
253 cd08217 STKc_Nek2 Catalytic do 99.1 2.9E-10 6.4E-15 110.3 11.0 107 463-570 1-111 (265)
254 cd05581 STKc_PDK1 Catalytic do 99.1 9.4E-11 2E-15 114.9 7.5 106 462-570 1-108 (280)
255 cd06917 STKc_NAK1_like Catalyt 99.1 3.5E-10 7.5E-15 110.8 11.5 101 463-569 2-106 (277)
256 cd06612 STKc_MST1_2 Catalytic 99.1 2.1E-10 4.6E-15 110.8 9.8 102 462-570 3-105 (256)
257 cd05101 PTKc_FGFR2 Catalytic d 99.1 2.6E-10 5.6E-15 113.4 10.6 107 462-570 15-143 (304)
258 cd05572 STKc_cGK_PKG Catalytic 99.1 2.8E-10 6.2E-15 110.4 10.6 97 470-569 1-98 (262)
259 cd05051 PTKc_DDR Catalytic dom 99.1 3.2E-10 6.9E-15 112.2 11.1 108 461-570 4-136 (296)
260 cd05045 PTKc_RET Catalytic dom 99.1 4.1E-10 8.8E-15 111.1 11.9 90 463-554 1-96 (290)
261 KOG3207 Beta-tubulin folding c 99.1 6.3E-12 1.4E-16 121.8 -1.1 211 118-352 118-340 (505)
262 cd05035 PTKc_Axl_like Catalyti 99.1 3.7E-10 8E-15 110.2 11.3 106 464-570 1-119 (273)
263 cd05092 PTKc_TrkA Catalytic do 99.1 2.5E-10 5.4E-15 112.1 10.1 105 463-570 6-128 (280)
264 cd05078 PTK_Jak2_Jak3_rpt1 Pse 99.1 7.8E-11 1.7E-15 114.1 6.4 98 468-570 1-106 (258)
265 cd05094 PTKc_TrkC Catalytic do 99.1 2.4E-10 5.1E-15 112.9 9.9 106 462-570 5-129 (291)
266 KOG0193 Serine/threonine prote 99.1 5E-11 1.1E-15 120.2 5.0 103 462-570 392-494 (678)
267 cd06642 STKc_STK25-YSK1 Cataly 99.1 1.1E-10 2.4E-15 114.3 7.4 100 464-569 6-106 (277)
268 cd06606 STKc_MAPKKK Catalytic 99.1 5.2E-10 1.1E-14 108.0 12.0 104 463-570 1-107 (260)
269 cd06621 PKc_MAPKK_Pek1_like Ca 99.1 3.9E-10 8.4E-15 111.1 11.1 105 463-569 2-110 (287)
270 cd07844 STKc_PCTAIRE_like Cata 99.1 3.6E-10 7.8E-15 111.6 10.9 101 462-567 5-106 (291)
271 cd06653 STKc_MEKK3_like_1 Cata 99.1 5.7E-10 1.2E-14 108.4 12.1 105 462-569 2-111 (264)
272 cd05099 PTKc_FGFR4 Catalytic d 99.1 3.5E-10 7.6E-15 113.0 10.8 107 462-570 12-140 (314)
273 KOG0578 p21-activated serine/t 99.1 5E-11 1.1E-15 119.5 4.6 90 462-554 273-363 (550)
274 cd08223 STKc_Nek4 Catalytic do 99.1 3.8E-10 8.1E-15 109.1 10.7 106 463-570 1-108 (257)
275 cd07853 STKc_NLK Catalytic dom 99.1 3.3E-10 7.2E-15 116.0 10.8 102 463-569 1-108 (372)
276 cd05041 PTKc_Fes_like Catalyti 99.1 4.6E-10 9.9E-15 108.2 11.1 98 468-569 1-98 (251)
277 cd05100 PTKc_FGFR3 Catalytic d 99.1 3.9E-10 8.5E-15 113.7 11.0 106 463-570 13-140 (334)
278 cd07860 STKc_CDK2_3 Catalytic 99.1 2.6E-10 5.6E-15 112.1 9.4 105 463-570 1-106 (284)
279 KOG0658 Glycogen synthase kina 99.1 6.1E-11 1.3E-15 113.0 4.6 84 463-554 25-114 (364)
280 cd06627 STKc_Cdc7_like Catalyt 99.1 7.2E-10 1.6E-14 106.8 12.4 104 463-570 1-105 (254)
281 cd05077 PTK_Jak1_rpt1 Pseudoki 99.1 3.5E-10 7.6E-15 109.8 10.2 98 468-570 1-111 (262)
282 cd06605 PKc_MAPKK Catalytic do 99.1 3.1E-10 6.7E-15 110.3 9.8 91 463-555 2-93 (265)
283 cd00192 PTKc Catalytic domain 99.1 4.4E-10 9.6E-15 108.8 10.8 101 468-570 1-111 (262)
284 cd06613 STKc_MAP4K3_like Catal 99.1 5.6E-10 1.2E-14 108.2 11.4 103 462-569 3-106 (262)
285 PHA03212 serine/threonine kina 99.1 3.9E-10 8.5E-15 115.8 10.8 96 462-570 92-188 (391)
286 cd05056 PTKc_FAK Catalytic dom 99.1 4.2E-10 9.1E-15 109.8 10.5 104 462-570 6-113 (270)
287 KOG1259 Nischarin, modulator o 99.1 2.1E-11 4.4E-16 112.6 1.1 127 196-328 286-413 (490)
288 cd05060 PTKc_Syk_like Catalyti 99.1 5.1E-10 1.1E-14 108.3 10.9 97 468-570 1-101 (257)
289 cd05042 PTKc_Aatyk Catalytic d 99.1 4.4E-10 9.4E-15 109.6 10.4 86 469-556 2-90 (269)
290 KOG4721 Serine/threonine prote 99.1 1.3E-10 2.8E-15 116.1 6.5 89 467-566 129-220 (904)
291 cd05602 STKc_SGK1 Catalytic do 99.1 4.4E-10 9.5E-15 112.9 10.4 88 468-555 1-90 (325)
292 KOG1989 ARK protein kinase fam 99.1 1.8E-10 3.9E-15 121.6 7.6 104 463-570 38-150 (738)
293 cd05115 PTKc_Zap-70 Catalytic 99.1 6.7E-10 1.5E-14 107.5 11.2 97 469-570 2-101 (257)
294 cd05089 PTKc_Tie1 Catalytic do 99.1 6.1E-10 1.3E-14 110.3 10.9 107 462-570 2-125 (297)
295 PF14580 LRR_9: Leucine-rich r 99.1 1.5E-10 3.2E-15 102.7 5.8 123 218-345 19-147 (175)
296 cd05037 PTK_Jak_rpt1 Pseudokin 99.1 4.1E-10 8.9E-15 109.0 9.5 96 468-570 1-107 (259)
297 smart00219 TyrKc Tyrosine kina 99.1 7.3E-10 1.6E-14 107.1 11.2 104 464-570 1-109 (258)
298 PTZ00283 serine/threonine prot 99.1 4.7E-10 1E-14 118.7 10.5 108 460-568 30-147 (496)
299 cd05579 STKc_MAST_like Catalyt 99.1 3E-10 6.5E-15 110.2 8.4 98 470-570 1-99 (265)
300 cd06608 STKc_myosinIII_like Ca 99.1 4.6E-10 9.9E-15 109.6 9.6 106 460-569 4-118 (275)
301 cd05047 PTKc_Tie Catalytic dom 99.1 9E-10 2E-14 107.4 11.5 101 468-570 1-118 (270)
302 cd05083 PTKc_Chk Catalytic dom 99.1 5.4E-10 1.2E-14 107.9 9.8 101 462-570 6-106 (254)
303 cd07870 STKc_PFTAIRE2 Catalyti 99.1 8E-10 1.7E-14 109.1 11.1 105 460-569 3-108 (291)
304 cd06633 STKc_TAO3 Catalytic do 99.1 1.3E-09 2.8E-14 108.8 12.5 104 464-570 23-127 (313)
305 KOG0594 Protein kinase PCTAIRE 99.1 1.8E-10 3.9E-15 109.8 6.0 93 462-556 11-111 (323)
306 cd05086 PTKc_Aatyk2 Catalytic 99.1 4.5E-10 9.8E-15 109.4 9.0 85 469-555 2-89 (268)
307 cd08528 STKc_Nek10 Catalytic d 99.1 8.1E-10 1.7E-14 107.7 10.8 108 463-570 1-119 (269)
308 KOG0199 ACK and related non-re 99.1 9.6E-11 2.1E-15 119.7 4.2 86 466-554 114-203 (1039)
309 cd05111 PTK_HER3 Pseudokinase 99.1 8.6E-10 1.9E-14 108.2 10.9 104 462-570 7-115 (279)
310 cd07835 STKc_CDK1_like Catalyt 99.1 6.4E-10 1.4E-14 109.3 10.1 104 464-570 1-105 (283)
311 cd05054 PTKc_VEGFR Catalytic d 99.1 5.5E-10 1.2E-14 112.6 9.7 91 462-554 7-105 (337)
312 cd05044 PTKc_c-ros Catalytic d 99.1 3.1E-10 6.8E-15 110.5 7.7 101 468-570 1-112 (269)
313 cd05116 PTKc_Syk Catalytic dom 99.1 9E-10 2E-14 106.6 10.9 97 469-570 2-101 (257)
314 KOG0033 Ca2+/calmodulin-depend 99.1 5.1E-12 1.1E-16 113.3 -4.5 92 461-553 10-102 (355)
315 KOG0607 MAP kinase-interacting 99.1 1.1E-10 2.3E-15 108.9 3.9 94 454-555 75-170 (463)
316 cd05080 PTKc_Tyk2_rpt2 Catalyt 99.1 9.1E-10 2E-14 108.2 10.9 101 464-570 6-113 (283)
317 cd05586 STKc_Sck1_like Catalyt 99.1 5.6E-10 1.2E-14 112.4 9.5 96 470-568 1-100 (330)
318 cd07843 STKc_CDC2L1 Catalytic 99.1 5.7E-10 1.2E-14 110.3 9.4 105 462-570 5-112 (293)
319 cd08215 STKc_Nek Catalytic dom 99.0 1.4E-09 3E-14 105.0 11.8 107 463-570 1-109 (258)
320 cd06617 PKc_MKK3_6 Catalytic d 99.0 9.6E-10 2.1E-14 108.0 10.8 106 462-570 1-109 (283)
321 PF14580 LRR_9: Leucine-rich r 99.0 2.7E-10 5.8E-15 101.1 6.0 82 96-182 18-101 (175)
322 KOG0690 Serine/threonine prote 99.0 6.6E-11 1.4E-15 110.4 2.1 95 461-555 167-262 (516)
323 cd07833 STKc_CDKL Catalytic do 99.0 6.4E-10 1.4E-14 109.5 9.3 103 463-569 2-105 (288)
324 cd05082 PTKc_Csk Catalytic dom 99.0 1.1E-09 2.4E-14 105.9 10.8 102 462-570 6-108 (256)
325 KOG4257 Focal adhesion tyrosin 99.0 3.7E-10 8E-15 114.0 7.5 90 465-557 392-486 (974)
326 cd06636 STKc_MAP4K4_6 Catalyti 99.0 7E-10 1.5E-14 108.9 9.6 110 453-567 7-124 (282)
327 cd06659 STKc_PAK6 Catalytic do 99.0 5.9E-10 1.3E-14 110.4 9.0 100 464-570 23-123 (297)
328 cd05122 PKc_STE Catalytic doma 99.0 1.8E-09 3.8E-14 103.8 12.2 103 463-570 1-104 (253)
329 cd05075 PTKc_Axl Catalytic dom 99.0 1.4E-09 3.1E-14 106.1 11.5 105 465-570 2-118 (272)
330 cd08530 STKc_CNK2-like Catalyt 99.0 5.1E-10 1.1E-14 108.1 8.1 107 463-570 1-109 (256)
331 KOG0587 Traf2- and Nck-interac 99.0 6.9E-10 1.5E-14 116.6 9.3 105 455-564 12-123 (953)
332 PRK09188 serine/threonine prot 99.0 1E-09 2.2E-14 109.7 10.2 89 459-550 15-107 (365)
333 cd07862 STKc_CDK6 Catalytic do 99.0 1.6E-09 3.5E-14 106.9 11.5 105 463-570 2-116 (290)
334 cd05613 STKc_MSK1_N N-terminal 99.0 1.1E-09 2.4E-14 108.0 10.4 93 463-555 1-99 (290)
335 cd05109 PTKc_HER2 Catalytic do 99.0 1.6E-09 3.6E-14 106.1 11.2 104 462-570 7-115 (279)
336 cd07864 STKc_CDK12 Catalytic d 99.0 1.2E-09 2.6E-14 108.4 10.0 107 460-570 5-122 (302)
337 cd08226 PK_STRAD_beta Pseudoki 99.0 1.6E-09 3.5E-14 109.0 10.9 99 469-569 5-106 (328)
338 cd07839 STKc_CDK5 Catalytic do 99.0 5.5E-10 1.2E-14 109.8 7.4 104 463-570 1-105 (284)
339 cd07837 STKc_CdkB_plant Cataly 99.0 1.3E-09 2.8E-14 107.7 10.1 107 462-570 1-116 (295)
340 cd05091 PTKc_Ror2 Catalytic do 99.0 1.1E-09 2.4E-14 107.6 9.4 90 463-554 6-101 (283)
341 cd05633 STKc_GRK3 Catalytic do 99.0 2E-09 4.3E-14 105.6 11.1 99 469-570 1-103 (279)
342 PLN00009 cyclin-dependent kina 99.0 1.9E-09 4.1E-14 106.6 11.1 92 462-555 2-94 (294)
343 cd07840 STKc_CDK9_like Catalyt 99.0 1.5E-09 3.3E-14 106.7 10.3 103 464-570 1-106 (287)
344 PHA03211 serine/threonine kina 99.0 1.4E-09 3.1E-14 113.3 10.6 98 461-570 168-266 (461)
345 cd06658 STKc_PAK5 Catalytic do 99.0 6.4E-10 1.4E-14 109.9 7.6 100 464-570 24-124 (292)
346 cd05606 STKc_beta_ARK Catalyti 99.0 1.9E-09 4.1E-14 105.7 10.9 99 469-570 1-103 (278)
347 cd07845 STKc_CDK10 Catalytic d 99.0 1.7E-09 3.7E-14 107.8 10.3 107 460-570 5-114 (309)
348 cd06657 STKc_PAK4 Catalytic do 99.0 1.6E-09 3.5E-14 107.0 9.9 96 467-569 25-121 (292)
349 cd06634 STKc_TAO2 Catalytic do 99.0 2.4E-09 5.3E-14 106.6 11.2 103 464-569 17-120 (308)
350 cd05110 PTKc_HER4 Catalytic do 99.0 2.1E-09 4.7E-14 106.7 10.7 103 462-569 7-114 (303)
351 PHA03209 serine/threonine kina 99.0 1.5E-09 3.3E-14 110.4 9.7 99 460-570 64-163 (357)
352 cd05123 STKc_AGC Catalytic dom 99.0 1.2E-09 2.6E-14 105.1 8.4 97 470-569 1-98 (250)
353 cd06648 STKc_PAK_II Catalytic 99.0 2.9E-09 6.2E-14 104.8 11.2 99 464-569 21-120 (285)
354 KOG0531 Protein phosphatase 1, 99.0 5.6E-11 1.2E-15 122.9 -1.3 225 93-354 91-321 (414)
355 KOG0660 Mitogen-activated prot 99.0 6.9E-10 1.5E-14 105.7 6.0 94 461-556 21-120 (359)
356 PTZ00036 glycogen synthase kin 99.0 2E-09 4.4E-14 112.4 10.1 100 461-568 65-174 (440)
357 cd05611 STKc_Rim15_like Cataly 99.0 3.1E-09 6.7E-14 103.0 10.6 88 468-555 2-91 (260)
358 cd08222 STKc_Nek11 Catalytic d 99.0 8.1E-10 1.8E-14 107.0 6.5 108 463-570 1-112 (260)
359 cd07880 STKc_p38gamma_MAPK12 C 99.0 3.3E-09 7.1E-14 107.4 11.1 105 460-570 13-124 (343)
360 KOG4658 Apoptotic ATPase [Sign 99.0 3.7E-10 8E-15 124.8 4.5 126 48-180 523-653 (889)
361 cd05058 PTKc_Met_Ron Catalytic 99.0 3.6E-09 7.9E-14 102.6 10.9 97 468-568 1-102 (262)
362 cd07831 STKc_MOK Catalytic dom 99.0 3.5E-09 7.7E-14 103.8 11.0 102 464-570 1-106 (282)
363 cd07842 STKc_CDK8_like Catalyt 99.0 3E-09 6.5E-14 106.3 10.6 91 463-554 1-96 (316)
364 PHA03390 pk1 serine/threonine- 99.0 4E-09 8.7E-14 102.7 11.2 105 455-570 7-115 (267)
365 cd07856 STKc_Sty1_Hog1 Catalyt 99.0 1.6E-09 3.4E-14 109.0 8.5 96 457-554 5-102 (328)
366 cd07877 STKc_p38alpha_MAPK14 C 99.0 3.5E-09 7.5E-14 107.3 11.0 112 453-570 8-126 (345)
367 cd05583 STKc_MSK_N N-terminal 99.0 2.1E-09 4.6E-14 105.9 9.0 104 463-569 1-110 (288)
368 KOG0531 Protein phosphatase 1, 99.0 6.1E-11 1.3E-15 122.6 -2.1 219 119-352 70-291 (414)
369 cd07876 STKc_JNK2 Catalytic do 98.9 3.8E-09 8.1E-14 107.7 10.8 92 460-553 19-117 (359)
370 cd07865 STKc_CDK9 Catalytic do 98.9 3.7E-09 8E-14 105.3 10.5 105 462-570 12-125 (310)
371 cd05074 PTKc_Tyro3 Catalytic d 98.9 5.4E-09 1.2E-13 102.0 11.4 106 464-570 1-119 (273)
372 KOG4236 Serine/threonine prote 98.9 1.6E-09 3.4E-14 107.4 7.4 85 467-553 569-654 (888)
373 cd07863 STKc_CDK4 Catalytic do 98.9 4.1E-09 9E-14 103.8 10.4 105 463-570 1-114 (288)
374 cd07852 STKc_MAPK15 Catalytic 98.9 3.1E-09 6.6E-14 107.3 9.3 104 461-570 6-113 (337)
375 cd07830 STKc_MAK_like Catalyti 98.9 1.9E-09 4.2E-14 105.8 7.7 103 464-570 1-105 (283)
376 cd07878 STKc_p38beta_MAPK11 Ca 98.9 2.9E-09 6.2E-14 107.9 9.0 105 459-569 12-123 (343)
377 KOG4279 Serine/threonine prote 98.9 8.3E-10 1.8E-14 112.8 4.8 84 469-555 582-666 (1226)
378 cd07829 STKc_CDK_like Catalyti 98.9 1.9E-09 4.2E-14 105.7 7.2 103 464-570 1-104 (282)
379 cd07875 STKc_JNK1 Catalytic do 98.9 5.8E-09 1.3E-13 106.5 10.8 92 460-553 22-120 (364)
380 PHA03207 serine/threonine kina 98.9 4.8E-09 1E-13 108.2 9.8 97 462-570 92-191 (392)
381 PF13855 LRR_8: Leucine rich r 98.9 1.1E-09 2.3E-14 79.9 3.5 59 98-156 2-60 (61)
382 cd07855 STKc_ERK5 Catalytic do 98.9 3.6E-09 7.8E-14 106.7 8.4 103 462-569 5-112 (334)
383 cd07874 STKc_JNK3 Catalytic do 98.9 6.5E-09 1.4E-13 105.8 10.2 92 460-553 15-113 (355)
384 KOG1151 Tousled-like protein k 98.9 6.1E-10 1.3E-14 108.1 2.4 95 462-556 463-563 (775)
385 KOG0576 Mitogen-activated prot 98.9 2.3E-10 5E-15 116.5 -0.7 91 460-553 13-104 (829)
386 PTZ00024 cyclin-dependent prot 98.9 7.7E-09 1.7E-13 104.3 10.3 92 463-555 9-113 (335)
387 smart00221 STYKc Protein kinas 98.9 1.5E-08 3.2E-13 95.5 11.3 102 464-569 1-103 (225)
388 cd05118 STKc_CMGC Catalytic do 98.9 7.7E-09 1.7E-13 101.5 9.1 103 464-570 1-104 (283)
389 cd07834 STKc_MAPK Catalytic do 98.9 5.5E-09 1.2E-13 105.1 8.1 103 463-570 1-109 (330)
390 PF13855 LRR_8: Leucine rich r 98.9 2.1E-09 4.5E-14 78.4 3.6 61 121-181 1-61 (61)
391 KOG4658 Apoptotic ATPase [Sign 98.9 4.9E-09 1.1E-13 116.0 8.3 103 122-226 546-650 (889)
392 cd07850 STKc_JNK Catalytic dom 98.9 1.4E-08 3E-13 103.3 11.0 93 460-554 14-113 (353)
393 KOG0667 Dual-specificity tyros 98.9 4.6E-09 1E-13 107.6 7.3 90 463-557 187-283 (586)
394 PRK10345 hypothetical protein; 98.9 1.2E-08 2.7E-13 94.2 9.6 87 464-555 4-101 (210)
395 cd07838 STKc_CDK4_6_like Catal 98.9 1.4E-08 3E-13 99.9 10.6 104 464-570 1-113 (287)
396 cd07858 STKc_TEY_MAPK_plant Ca 98.8 8E-09 1.7E-13 104.3 9.0 103 462-569 5-113 (337)
397 cd07867 STKc_CDC2L6 Catalytic 98.8 2.3E-08 4.9E-13 100.0 11.5 97 467-569 6-113 (317)
398 cd07849 STKc_ERK1_2_like Catal 98.8 1.3E-08 2.8E-13 102.8 9.8 101 461-568 4-110 (336)
399 KOG0579 Ste20-like serine/thre 98.8 3.2E-10 7E-15 114.5 -1.9 88 463-553 33-121 (1187)
400 cd07868 STKc_CDK8 Catalytic do 98.8 2.1E-08 4.6E-13 100.3 11.0 82 467-554 6-92 (317)
401 KOG2345 Serine/threonine prote 98.8 1.4E-09 3.1E-14 98.2 2.1 91 462-555 21-117 (302)
402 cd06618 PKc_MKK7 Catalytic dom 98.8 1.5E-08 3.3E-13 100.2 9.8 105 461-570 14-120 (296)
403 cd06616 PKc_MKK4 Catalytic dom 98.8 1.1E-08 2.4E-13 100.7 8.7 86 463-551 5-92 (288)
404 cd08216 PK_STRAD Pseudokinase 98.8 1.2E-08 2.6E-13 101.8 9.0 100 466-568 6-105 (314)
405 KOG0666 Cyclin C-dependent kin 98.8 1.1E-09 2.5E-14 101.8 1.3 93 460-554 22-120 (438)
406 KOG4645 MAPKKK (MAP kinase kin 98.8 7.1E-10 1.5E-14 121.0 -0.2 96 459-555 1232-1328(1509)
407 KOG0608 Warts/lats-like serine 98.8 3.5E-09 7.7E-14 107.3 4.5 103 453-555 617-723 (1034)
408 KOG0986 G protein-coupled rece 98.8 2.5E-09 5.4E-14 104.5 3.1 96 462-557 185-281 (591)
409 cd07879 STKc_p38delta_MAPK13 C 98.8 2.4E-08 5.1E-13 101.1 10.3 90 461-552 14-110 (342)
410 PLN03224 probable serine/threo 98.8 1.5E-08 3.1E-13 106.0 8.7 95 460-554 143-278 (507)
411 cd07851 STKc_p38 Catalytic dom 98.8 1E-08 2.2E-13 103.7 7.5 105 460-570 13-124 (343)
412 cd07854 STKc_MAPK4_6 Catalytic 98.8 1.1E-08 2.4E-13 103.4 7.6 89 462-554 5-108 (342)
413 cd07866 STKc_BUR1 Catalytic do 98.8 1.7E-08 3.6E-13 100.6 8.4 105 461-569 7-120 (311)
414 cd05147 RIO1_euk RIO kinase fa 98.8 1.7E-08 3.6E-13 92.4 7.4 84 467-552 2-108 (190)
415 PTZ00284 protein kinase; Provi 98.8 1.9E-08 4E-13 106.3 8.7 107 456-570 123-237 (467)
416 KOG1035 eIF-2alpha kinase GCN2 98.7 3.3E-09 7.1E-14 115.3 2.4 82 458-541 475-557 (1351)
417 KOG1152 Signal transduction se 98.7 1E-08 2.2E-13 103.1 5.5 97 459-555 558-664 (772)
418 cd00180 PKc Catalytic domain o 98.7 8.1E-08 1.8E-12 89.1 11.1 97 470-570 1-98 (215)
419 KOG0200 Fibroblast/platelet-de 98.7 3.2E-08 7E-13 107.0 8.9 92 463-556 297-397 (609)
420 PRK10359 lipopolysaccharide co 98.7 4E-08 8.8E-13 91.2 8.2 105 447-552 14-134 (232)
421 KOG0599 Phosphorylase kinase g 98.7 9.3E-09 2E-13 94.1 2.4 94 462-555 17-117 (411)
422 cd07857 STKc_MPK1 Catalytic do 98.6 1.4E-07 2.9E-12 95.1 10.7 103 463-570 1-111 (332)
423 cd05576 STKc_RPK118_like Catal 98.6 8.3E-08 1.8E-12 91.6 7.7 87 473-570 4-91 (237)
424 PHA03210 serine/threonine kina 98.6 5.3E-08 1.1E-12 103.5 6.8 93 461-554 147-255 (501)
425 cd05145 RIO1_like RIO kinase f 98.6 2.6E-07 5.5E-12 84.8 10.1 82 467-550 2-106 (190)
426 KOG0596 Dual specificity; seri 98.6 5.7E-08 1.2E-12 97.5 5.8 100 462-564 361-461 (677)
427 KOG0668 Casein kinase II, alph 98.6 9.8E-09 2.1E-13 91.6 -0.1 85 461-551 37-125 (338)
428 smart00220 S_TKc Serine/Threon 98.6 2.4E-07 5.2E-12 88.2 9.2 91 474-569 1-92 (244)
429 KOG0696 Serine/threonine prote 98.6 9.7E-09 2.1E-13 99.1 -0.6 94 462-555 349-444 (683)
430 KOG0584 Serine/threonine prote 98.6 2.8E-08 6E-13 101.3 2.4 102 466-567 44-152 (632)
431 PRK14879 serine/threonine prot 98.5 2.6E-07 5.6E-12 86.4 8.5 86 468-554 2-92 (211)
432 KOG0695 Serine/threonine prote 98.5 2.8E-08 6E-13 93.4 1.7 95 461-555 249-345 (593)
433 KOG1859 Leucine-rich repeat pr 98.5 1.2E-09 2.7E-14 112.2 -7.9 181 162-351 102-292 (1096)
434 KOG2982 Uncharacterized conser 98.5 2.2E-08 4.8E-13 92.9 0.7 62 266-327 199-262 (418)
435 KOG1859 Leucine-rich repeat pr 98.5 3E-09 6.6E-14 109.5 -5.4 179 138-327 102-292 (1096)
436 KOG2982 Uncharacterized conser 98.5 2.3E-08 4.9E-13 92.8 -0.1 79 218-296 199-285 (418)
437 TIGR03724 arch_bud32 Kae1-asso 98.5 5E-07 1.1E-11 83.7 8.4 85 469-554 1-90 (199)
438 KOG0669 Cyclin T-dependent kin 98.4 3.2E-09 7E-14 96.0 -7.0 93 462-556 17-118 (376)
439 COG5238 RNA1 Ran GTPase-activa 98.4 8E-08 1.7E-12 88.1 1.7 211 94-304 27-286 (388)
440 PRK09605 bifunctional UGMP fam 98.4 1.6E-06 3.4E-11 93.0 10.1 91 462-553 333-428 (535)
441 KOG2120 SCF ubiquitin ligase, 98.4 1.2E-08 2.7E-13 94.5 -5.2 180 98-300 186-373 (419)
442 cd05144 RIO2_C RIO kinase fami 98.3 1.4E-06 3E-11 80.6 7.9 95 455-553 8-123 (198)
443 KOG1006 Mitogen-activated prot 98.3 1E-07 2.2E-12 87.1 0.2 84 465-551 67-152 (361)
444 KOG0604 MAP kinase-activated p 98.3 1.4E-07 3E-12 87.8 0.9 90 460-557 59-155 (400)
445 smart00090 RIO RIO-like kinase 98.2 3.4E-06 7.5E-11 79.9 8.1 86 463-552 29-139 (237)
446 KOG4579 Leucine-rich repeat (L 98.2 6.5E-08 1.4E-12 79.6 -3.4 105 99-207 29-136 (177)
447 COG5238 RNA1 Ran GTPase-activa 98.1 3.1E-06 6.7E-11 77.9 4.4 223 117-351 26-285 (388)
448 KOG2120 SCF ubiquitin ligase, 98.1 1.5E-07 3.1E-12 87.6 -4.6 80 48-134 185-273 (419)
449 PRK15386 type III secretion pr 98.1 1.4E-05 3.1E-10 79.9 8.6 92 94-202 49-140 (426)
450 KOG4579 Leucine-rich repeat (L 98.0 4.1E-07 8.8E-12 75.0 -2.3 57 220-278 79-135 (177)
451 KOG0614 cGMP-dependent protein 98.0 3E-07 6.6E-12 91.3 -3.6 95 462-556 420-515 (732)
452 PLN03225 Serine/threonine-prot 98.0 8.6E-06 1.9E-10 87.4 6.6 89 460-555 130-229 (566)
453 cd05120 APH_ChoK_like Aminogly 98.0 1.7E-05 3.6E-10 69.4 7.0 79 466-550 2-82 (155)
454 KOG1290 Serine/threonine prote 98.0 1.9E-05 4.2E-10 78.5 7.5 90 460-554 76-178 (590)
455 KOG1027 Serine/threonine prote 98.0 6.3E-06 1.4E-10 87.1 4.3 84 464-555 511-596 (903)
456 PF12799 LRR_4: Leucine Rich r 98.0 9.4E-06 2E-10 54.1 3.7 36 98-134 2-37 (44)
457 KOG0603 Ribosomal protein S6 k 97.9 5.5E-06 1.2E-10 85.2 3.4 103 461-570 321-427 (612)
458 KOG1345 Serine/threonine kinas 97.9 3.8E-06 8.3E-11 77.3 1.8 91 462-556 24-117 (378)
459 PHA02882 putative serine/threo 97.9 6.7E-05 1.4E-09 74.1 10.9 91 462-553 12-118 (294)
460 KOG1167 Serine/threonine prote 97.9 7.5E-06 1.6E-10 80.0 3.7 94 456-554 30-128 (418)
461 PRK12274 serine/threonine prot 97.9 5.1E-05 1.1E-09 69.2 8.9 83 465-552 5-89 (218)
462 cd05119 RIO RIO kinase family, 97.9 2.8E-05 6E-10 71.1 7.2 78 467-548 2-102 (187)
463 KOG1163 Casein kinase (serine/ 97.8 3.3E-05 7.2E-10 70.1 6.1 87 461-553 14-102 (341)
464 PF12799 LRR_4: Leucine Rich r 97.8 1.9E-05 4.2E-10 52.6 3.3 36 122-158 2-37 (44)
465 KOG1644 U2-associated snRNP A' 97.8 4.3E-05 9.3E-10 67.6 6.3 102 243-346 43-148 (233)
466 KOG1644 U2-associated snRNP A' 97.8 4.5E-05 9.8E-10 67.5 5.7 82 196-279 44-126 (233)
467 TIGR01982 UbiB 2-polyprenylphe 97.8 4.5E-05 9.8E-10 79.1 6.7 86 468-553 123-250 (437)
468 KOG0671 LAMMER dual specificit 97.8 2E-05 4.3E-10 76.2 3.5 90 461-555 88-184 (415)
469 KOG0984 Mitogen-activated prot 97.7 2.4E-05 5.1E-10 69.4 3.3 88 463-553 47-136 (282)
470 KOG0195 Integrin-linked kinase 97.7 4E-06 8.7E-11 77.1 -1.6 88 467-556 195-282 (448)
471 PRK04750 ubiB putative ubiquin 97.7 1.5E-05 3.3E-10 83.7 2.5 89 462-551 120-251 (537)
472 COG0515 SPS1 Serine/threonine 97.7 0.00018 3.8E-09 71.7 10.0 90 464-555 2-92 (384)
473 KOG0664 Nemo-like MAPK-related 97.7 2.7E-06 5.8E-11 78.2 -3.3 89 464-554 55-149 (449)
474 PRK15386 type III secretion pr 97.7 0.0001 2.3E-09 73.8 7.4 75 141-229 48-123 (426)
475 KOG0983 Mitogen-activated prot 97.7 2.6E-05 5.7E-10 72.0 2.8 87 464-553 94-182 (391)
476 KOG1164 Casein kinase (serine/ 97.7 0.00012 2.6E-09 73.2 7.8 103 463-570 19-128 (322)
477 KOG3665 ZYG-1-like serine/thre 97.6 1.5E-05 3.3E-10 86.4 1.1 85 95-181 146-232 (699)
478 KOG3665 ZYG-1-like serine/thre 97.6 4.9E-05 1.1E-09 82.6 4.0 136 195-332 123-268 (699)
479 KOG1024 Receptor-like protein 97.5 0.00033 7.3E-09 68.1 7.2 91 461-553 283-380 (563)
480 KOG1165 Casein kinase (serine/ 97.4 0.00029 6.2E-09 67.2 6.1 85 463-553 29-115 (449)
481 PRK01723 3-deoxy-D-manno-octul 97.4 0.00078 1.7E-08 64.0 8.9 87 467-554 36-140 (239)
482 PF13306 LRR_5: Leucine rich r 97.4 0.00059 1.3E-08 57.9 7.2 122 213-340 7-128 (129)
483 KOG1166 Mitotic checkpoint ser 97.4 0.00013 2.9E-09 80.6 3.8 98 460-566 696-796 (974)
484 KOG0670 U4/U6-associated splic 97.3 7.6E-05 1.6E-09 75.0 1.5 91 462-557 432-529 (752)
485 cd05154 ACAD10_11_like Acyl-Co 97.3 0.00068 1.5E-08 63.6 7.3 84 468-553 4-92 (223)
486 PF13306 LRR_5: Leucine rich r 97.2 0.0016 3.4E-08 55.3 7.9 84 92-178 7-90 (129)
487 KOG2739 Leucine-rich acidic nu 97.1 0.0002 4.3E-09 66.3 1.6 64 119-182 63-129 (260)
488 KOG2739 Leucine-rich acidic nu 96.9 0.00037 8E-09 64.5 1.5 40 264-303 63-104 (260)
489 KOG0665 Jun-N-terminal kinase 96.8 0.00037 8.1E-09 66.1 0.7 89 463-554 18-113 (369)
490 cd05151 ChoK Choline Kinase (C 96.8 0.0032 6.9E-08 56.3 6.3 77 467-550 3-80 (170)
491 KOG2123 Uncharacterized conser 96.6 0.00013 2.8E-09 67.7 -3.6 98 243-344 20-123 (388)
492 KOG2123 Uncharacterized conser 96.5 0.00014 3E-09 67.6 -4.6 79 95-175 39-123 (388)
493 COG2112 Predicted Ser/Thr prot 96.2 0.012 2.5E-07 51.8 5.8 79 466-553 26-104 (201)
494 KOG0603 Ribosomal protein S6 k 95.9 0.0012 2.6E-08 68.4 -1.4 86 469-555 1-91 (612)
495 KOG1947 Leucine rich repeat pr 95.6 0.0016 3.6E-08 69.0 -2.2 15 263-277 359-373 (482)
496 PF00560 LRR_1: Leucine Rich R 95.3 0.0086 1.9E-07 33.1 1.0 18 99-117 2-19 (22)
497 KOG4341 F-box protein containi 95.1 0.0014 3.1E-08 64.4 -4.0 277 66-349 138-437 (483)
498 PF00560 LRR_1: Leucine Rich R 95.0 0.011 2.3E-07 32.7 0.9 21 122-143 1-21 (22)
499 KOG1947 Leucine rich repeat pr 94.9 0.0038 8.2E-08 66.2 -2.0 32 237-268 357-389 (482)
500 KOG4308 LRR-containing protein 94.7 0.00034 7.3E-09 72.9 -10.3 36 99-134 89-128 (478)
No 1
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=100.00 E-value=3.9e-56 Score=509.62 Aligned_cols=500 Identities=31% Similarity=0.451 Sum_probs=339.5
Q ss_pred CCchhhcCCCCCCEEEccCCccc------cCCCCccceeecccccccCCCCCCCccccccccCCCCCCEEecccCcCccc
Q 044615 39 DDYKELVRAVQARDTSISFDELH------EKLLTFEATAHFSVLAFTGQDWPLYSSIPDEIGNMKSLSDLQLSENILNGS 112 (571)
Q Consensus 39 ~~~~~l~~~~~l~~l~l~~n~l~------~~~l~~l~~l~l~~n~l~~~~~~~~~~~p~~~~~l~~L~~L~L~~n~i~~~ 112 (571)
..|..+.++++|+.|+++.|.+. +..+.+|+.|++++|.+++ .+|..+.++++|++|++++|.+.+.
T Consensus 251 ~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~-------~~p~~~~~l~~L~~L~l~~n~~~~~ 323 (968)
T PLN00113 251 PIPSSLGNLKNLQYLFLYQNKLSGPIPPSIFSLQKLISLDLSDNSLSG-------EIPELVIQLQNLEILHLFSNNFTGK 323 (968)
T ss_pred ccChhHhCCCCCCEEECcCCeeeccCchhHhhccCcCEEECcCCeecc-------CCChhHcCCCCCcEEECCCCccCCc
Confidence 45677777777888887777664 4566777777777777776 5666666666666666666666666
Q ss_pred ccccccCCCCCCEEEcccCcCcccccccccCCCCCCeeecccCcCcccCCccccCCCCCCEEEccCCCCCccCChhhhhc
Q 044615 113 IPLALGNLTNLVVLDLSTNKLSGSIPLSFANLTSLSILYLYENSLCDSIPKEIGNMNSLSILDLSSNKLNGSIPLSLANL 192 (571)
Q Consensus 113 ~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l 192 (571)
.|..+..+++|+.|++++|.+.+.+|..++.+++|+.|++++|.+.+.+|..+..+++|+.|++++|++.+.+|..+..+
T Consensus 324 ~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~~~~L~~L~Ls~n~l~~~~p~~~~~~~~L~~L~l~~n~l~~~~p~~~~~~ 403 (968)
T PLN00113 324 IPVALTSLPRLQVLQLWSNKFSGEIPKNLGKHNNLTVLDLSTNNLTGEIPEGLCSSGNLFKLILFSNSLEGEIPKSLGAC 403 (968)
T ss_pred CChhHhcCCCCCEEECcCCCCcCcCChHHhCCCCCcEEECCCCeeEeeCChhHhCcCCCCEEECcCCEecccCCHHHhCC
Confidence 66666666666666666666666666666666666666666666655555555555555555555555554444444444
Q ss_pred cC-----------------------CCcEEEccCCcccccCCccccCCCCCcEEeCccCcCcCCCChhhhCCCCCCEEEc
Q 044615 193 TN-----------------------SLKVLYLSSNHIVGEIPLGHGMLSSLIQLTLNNNELSGQLSPELGSLIQLEYLDL 249 (571)
Q Consensus 193 ~~-----------------------~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L 249 (571)
++ +|+.|++++|.+++.+|..+..+++|+.|++++|.+.+..|..+ ..++|+.|++
T Consensus 404 ~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~p~~~-~~~~L~~L~l 482 (968)
T PLN00113 404 RSLRRVRLQDNSFSGELPSEFTKLPLVYFLDISNNNLQGRINSRKWDMPSLQMLSLARNKFFGGLPDSF-GSKRLENLDL 482 (968)
T ss_pred CCCCEEECcCCEeeeECChhHhcCCCCCEEECcCCcccCccChhhccCCCCcEEECcCceeeeecCccc-ccccceEEEC
Confidence 43 14445555554444444444445555555555555555444433 3456777777
Q ss_pred ccCccccccchhhccCCCCCEEEcCCccCccCcchhhhcccCCCEEEccCCcCCcccchhccCCCCCCEEEccCCcCccc
Q 044615 250 SANTFHKSIPESLSNLVKLHYLNLSNNQFSQKIPNKIEKLIHLSELDLSHNIFREEIPSQICSMQSLEKLNLSHNNLSGS 329 (571)
Q Consensus 250 ~~n~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~ 329 (571)
++|.+.+..|..+.++++|+.|++++|.+.+.+|..+..+++|+.|+|++|.+++.+|..+..+++|+.|+|++|++++.
T Consensus 483 s~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 562 (968)
T PLN00113 483 SRNQFSGAVPRKLGSLSELMQLKLSENKLSGEIPDELSSCKKLVSLDLSHNQLSGQIPASFSEMPVLSQLDLSQNQLSGE 562 (968)
T ss_pred cCCccCCccChhhhhhhccCEEECcCCcceeeCChHHcCccCCCEEECCCCcccccCChhHhCcccCCEEECCCCccccc
Confidence 77777777788888889999999999999988999999999999999999999999999999999999999999999999
Q ss_pred cccccccCCCCCEEECcCCcCcccCCCCCccCCCCcccccCCcCCCCCCC--CCCCCCCccccccccceeEEEEeehhhh
Q 044615 330 IPRCFEEMHWLSCIDISYNALQGLIPNSTAFRDAPMLALQGNKRLCGDIK--RLPPCKAFKSHKQSMKKIWVVIVFPLLG 407 (571)
Q Consensus 330 ~p~~~~~l~~L~~L~ls~N~l~~~~~~~~~~~~~~~l~l~~n~~~c~~~~--~~~~~~~~~~~~~~~~~~~~~i~~~i~~ 407 (571)
+|..+..++.|+.+++++|++.+.+|....+..+....+.||+..|+... ..++|.... .. ...+. ++..+++
T Consensus 563 ~p~~l~~l~~L~~l~ls~N~l~~~~p~~~~~~~~~~~~~~~n~~lc~~~~~~~~~~c~~~~--~~--~~~~~-~~~~~~~ 637 (968)
T PLN00113 563 IPKNLGNVESLVQVNISHNHLHGSLPSTGAFLAINASAVAGNIDLCGGDTTSGLPPCKRVR--KT--PSWWF-YITCTLG 637 (968)
T ss_pred CChhHhcCcccCEEeccCCcceeeCCCcchhcccChhhhcCCccccCCccccCCCCCcccc--cc--ceeee-ehhHHHH
Confidence 99999999999999999999999999877777777888899999997542 356674321 11 12222 2222222
Q ss_pred hHHHHHHHHhhhhhhccccCCCCccCCCCCCccCcceeeec----CccccHHHHHHHccCCCccCeeeccCcceEEEEEc
Q 044615 408 TVALLISLIGLFFNFRQRKNGSQTQQSSPRNTLGLLSVLTF----DGKIVHEEIIRATNNFDDGHCIGNGGQGSVYKAKL 483 (571)
Q Consensus 408 ~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~ 483 (571)
+++++++++++++++++++........... +.+..... ...++.+++. ..|...+.||+|+||.||+|+.
T Consensus 638 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~ig~G~~g~Vy~~~~ 711 (968)
T PLN00113 638 AFLVLALVAFGFVFIRGRNNLELKRVENED---GTWELQFFDSKVSKSITINDIL---SSLKEENVISRGKKGASYKGKS 711 (968)
T ss_pred HHHHHHHHHHHHHHHHhhhccccccccccc---ccccccccccccchhhhHHHHH---hhCCcccEEccCCCeeEEEEEE
Confidence 222222222222222222211111000000 00111001 1123444443 3467788999999999999994
Q ss_pred -CCCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhcCCCCcccEEEEEEeCCeeEEEEeccCCCChhhhhccCCCccCCC
Q 044615 484 -PTGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKIRHRNIVKFYGFCSHALHSFVVYEYLEMGSLAMNLSNDAAAEQFC 562 (571)
Q Consensus 484 -~~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~G~L~~~l~~~~~~~~l~ 562 (571)
.++..||||++...... ...|++.+++++|||||+++|+|.+.+..|+||||+++|+|.++++ .++
T Consensus 712 ~~~~~~vavK~~~~~~~~-------~~~~~~~l~~l~HpnIv~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~------~l~ 778 (968)
T PLN00113 712 IKNGMQFVVKEINDVNSI-------PSSEIADMGKLQHPNIVKLIGLCRSEKGAYLIHEYIEGKNLSEVLR------NLS 778 (968)
T ss_pred CCCCcEEEEEEccCCccc-------cHHHHHHHhhCCCCCcceEEEEEEcCCCCEEEEeCCCCCcHHHHHh------cCC
Confidence 68999999998643221 1256888999999999999999999999999999999999999996 378
Q ss_pred HHHHhhhc
Q 044615 563 WTKRMNAI 570 (571)
Q Consensus 563 w~~r~~ia 570 (571)
|.++.+||
T Consensus 779 ~~~~~~i~ 786 (968)
T PLN00113 779 WERRRKIA 786 (968)
T ss_pred HHHHHHHH
Confidence 99988876
No 2
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=100.00 E-value=3.8e-37 Score=352.95 Aligned_cols=301 Identities=35% Similarity=0.465 Sum_probs=172.7
Q ss_pred CCCCCCEEEccCCccc------cCCCCccceeecccccccCCCCCCCccccccccCCCCCCEEecccCcCcccccccccC
Q 044615 46 RAVQARDTSISFDELH------EKLLTFEATAHFSVLAFTGQDWPLYSSIPDEIGNMKSLSDLQLSENILNGSIPLALGN 119 (571)
Q Consensus 46 ~~~~l~~l~l~~n~l~------~~~l~~l~~l~l~~n~l~~~~~~~~~~~p~~~~~l~~L~~L~L~~n~i~~~~~~~~~~ 119 (571)
.+.+|++|+|+.|.+. ++.+++|+.|+|++|.+.+ .+|..++++++|++|+|++|.+.+.+|..+++
T Consensus 138 ~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~-------~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~ 210 (968)
T PLN00113 138 SIPNLETLDLSNNMLSGEIPNDIGSFSSLKVLDLGGNVLVG-------KIPNSLTNLTSLEFLTLASNQLVGQIPRELGQ 210 (968)
T ss_pred ccCCCCEEECcCCcccccCChHHhcCCCCCEEECccCcccc-------cCChhhhhCcCCCeeeccCCCCcCcCChHHcC
Confidence 4556666666666554 4556666666666666655 55666666666666666666666556666666
Q ss_pred CCCCCEEEcccCcCcccccccccCCCCCCeeecccCcCcccCCccccCCCCCCEEEccCCCCCccCChhhhhccCCCcEE
Q 044615 120 LTNLVVLDLSTNKLSGSIPLSFANLTSLSILYLYENSLCDSIPKEIGNMNSLSILDLSSNKLNGSIPLSLANLTNSLKVL 199 (571)
Q Consensus 120 l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~~L~~L 199 (571)
+++|++|+|++|.+.+.+|..++++++|++|++++|.+.+.+|..++++++|++|++++|++.+..|..+..+.+ |+.|
T Consensus 211 l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~-L~~L 289 (968)
T PLN00113 211 MKSLKWIYLGYNNLSGEIPYEIGGLTSLNHLDLVYNNLTGPIPSSLGNLKNLQYLFLYQNKLSGPIPPSIFSLQK-LISL 289 (968)
T ss_pred cCCccEEECcCCccCCcCChhHhcCCCCCEEECcCceeccccChhHhCCCCCCEEECcCCeeeccCchhHhhccC-cCEE
Confidence 666666666666666556666666666666666666665555656666666666666666665555555555554 6666
Q ss_pred EccCCcccccCCccccCCCCCcEEeCccCcCcCCCChhhhCCCCCCEEEcccCccccccchhhccCCCCCEEEcCCccCc
Q 044615 200 YLSSNHIVGEIPLGHGMLSSLIQLTLNNNELSGQLSPELGSLIQLEYLDLSANTFHKSIPESLSNLVKLHYLNLSNNQFS 279 (571)
Q Consensus 200 ~l~~n~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~n~l~ 279 (571)
++++|.+.+.+|..+..+++|+.|++++|.+.+..|..+..+++|+.|++++|.+.+.+|..+..+++|+.|++++|.++
T Consensus 290 ~Ls~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~~~~L~~L~Ls~n~l~ 369 (968)
T PLN00113 290 DLSDNSLSGEIPELVIQLQNLEILHLFSNNFTGKIPVALTSLPRLQVLQLWSNKFSGEIPKNLGKHNNLTVLDLSTNNLT 369 (968)
T ss_pred ECcCCeeccCCChhHcCCCCCcEEECCCCccCCcCChhHhcCCCCCEEECcCCCCcCcCChHHhCCCCCcEEECCCCeeE
Confidence 66666655555555555555666666665555555555555555555555555555555555555555555555555555
Q ss_pred cCcchhhhcccCCCEEEccCCcCCcccchhccCCCCCCEEEccCCcCccccccccccCCCCCEEECcCCcCcccC
Q 044615 280 QKIPNKIEKLIHLSELDLSHNIFREEIPSQICSMQSLEKLNLSHNNLSGSIPRCFEEMHWLSCIDISYNALQGLI 354 (571)
Q Consensus 280 ~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~ 354 (571)
+..|..+..+++|+.|++++|.+.+.+|..+..+++|+.|++++|++++..|..|..++.|+.|++++|.+++.+
T Consensus 370 ~~~p~~~~~~~~L~~L~l~~n~l~~~~p~~~~~~~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 444 (968)
T PLN00113 370 GEIPEGLCSSGNLFKLILFSNSLEGEIPKSLGACRSLRRVRLQDNSFSGELPSEFTKLPLVYFLDISNNNLQGRI 444 (968)
T ss_pred eeCChhHhCcCCCCEEECcCCEecccCCHHHhCCCCCCEEECcCCEeeeECChhHhcCCCCCEEECcCCcccCcc
Confidence 555555544455555555555554444444444555555555555554444444444444444444444444433
No 3
>KOG4194 consensus Membrane glycoprotein LIG-1 [Signal transduction mechanisms]
Probab=100.00 E-value=1.6e-35 Score=291.21 Aligned_cols=329 Identities=22% Similarity=0.189 Sum_probs=230.9
Q ss_pred CchhhcCCCCCCEEEccCCccc------cCCCCccceeecccccccCCCCCCCccccccccCCCCCCEEecccCcCcccc
Q 044615 40 DYKELVRAVQARDTSISFDELH------EKLLTFEATAHFSVLAFTGQDWPLYSSIPDEIGNMKSLSDLQLSENILNGSI 113 (571)
Q Consensus 40 ~~~~l~~~~~l~~l~l~~n~l~------~~~l~~l~~l~l~~n~l~~~~~~~~~~~p~~~~~l~~L~~L~L~~n~i~~~~ 113 (571)
+|.......+++.|+|.+|.++ .+.++.|+.+||+.|.++.... ..|..-.++++|+|++|+|+...
T Consensus 117 IP~f~~~sghl~~L~L~~N~I~sv~se~L~~l~alrslDLSrN~is~i~~-------~sfp~~~ni~~L~La~N~It~l~ 189 (873)
T KOG4194|consen 117 IPRFGHESGHLEKLDLRHNLISSVTSEELSALPALRSLDLSRNLISEIPK-------PSFPAKVNIKKLNLASNRITTLE 189 (873)
T ss_pred cccccccccceeEEeeeccccccccHHHHHhHhhhhhhhhhhchhhcccC-------CCCCCCCCceEEeeccccccccc
Confidence 3444444444555555555444 3445556666666666654211 23444456777777777777666
Q ss_pred cccccCCCCCCEEEcccCcCcccccccccCCCCCCeeecccCcCcccCCccccCCCCCCEEEccCCCCCccCChhhhhcc
Q 044615 114 PLALGNLTNLVVLDLSTNKLSGSIPLSFANLTSLSILYLYENSLCDSIPKEIGNMNSLSILDLSSNKLNGSIPLSLANLT 193 (571)
Q Consensus 114 ~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~ 193 (571)
...|.++.+|.+|.|+.|+|+...+..|.+|++|+.|+|..|.|...---.|.+|++|+.|.|..|++...-...|..+.
T Consensus 190 ~~~F~~lnsL~tlkLsrNrittLp~r~Fk~L~~L~~LdLnrN~irive~ltFqgL~Sl~nlklqrN~I~kL~DG~Fy~l~ 269 (873)
T KOG4194|consen 190 TGHFDSLNSLLTLKLSRNRITTLPQRSFKRLPKLESLDLNRNRIRIVEGLTFQGLPSLQNLKLQRNDISKLDDGAFYGLE 269 (873)
T ss_pred cccccccchheeeecccCcccccCHHHhhhcchhhhhhccccceeeehhhhhcCchhhhhhhhhhcCcccccCcceeeec
Confidence 67777777777777777777766666777777777777777777533334567777777777777777644344455555
Q ss_pred CCCcEEEccCCcccccCCccccCCCCCcEEeCccCcCcCCCChhhhCCCCCCEEEcccCccccccchhhccCCCCCEEEc
Q 044615 194 NSLKVLYLSSNHIVGEIPLGHGMLSSLIQLTLNNNELSGQLSPELGSLIQLEYLDLSANTFHKSIPESLSNLVKLHYLNL 273 (571)
Q Consensus 194 ~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L 273 (571)
+ +++|+|+.|++...-..++.+++.|+.|++++|.+..+.++.+...++|+.|+|++|+++...+.+|..+..|++|+|
T Consensus 270 k-me~l~L~~N~l~~vn~g~lfgLt~L~~L~lS~NaI~rih~d~WsftqkL~~LdLs~N~i~~l~~~sf~~L~~Le~LnL 348 (873)
T KOG4194|consen 270 K-MEHLNLETNRLQAVNEGWLFGLTSLEQLDLSYNAIQRIHIDSWSFTQKLKELDLSSNRITRLDEGSFRVLSQLEELNL 348 (873)
T ss_pred c-cceeecccchhhhhhcccccccchhhhhccchhhhheeecchhhhcccceeEeccccccccCChhHHHHHHHhhhhcc
Confidence 4 888888888887666677777888888888888888777777777888888888888888777778888888888888
Q ss_pred CCccCccCcchhhhcccCCCEEEccCCcCCcccc---hhccCCCCCCEEEccCCcCccccccccccCCCCCEEECcCCcC
Q 044615 274 SNNQFSQKIPNKIEKLIHLSELDLSHNIFREEIP---SQICSMQSLEKLNLSHNNLSGSIPRCFEEMHWLSCIDISYNAL 350 (571)
Q Consensus 274 s~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~---~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~ls~N~l 350 (571)
++|.++..-...|..+.+|+.|||++|.+...+. ..|.++++|+.|+|.+|+|..+.-.+|..++.|++|||.+|.+
T Consensus 349 s~Nsi~~l~e~af~~lssL~~LdLr~N~ls~~IEDaa~~f~gl~~LrkL~l~gNqlk~I~krAfsgl~~LE~LdL~~Nai 428 (873)
T KOG4194|consen 349 SHNSIDHLAEGAFVGLSSLHKLDLRSNELSWCIEDAAVAFNGLPSLRKLRLTGNQLKSIPKRAFSGLEALEHLDLGDNAI 428 (873)
T ss_pred cccchHHHHhhHHHHhhhhhhhcCcCCeEEEEEecchhhhccchhhhheeecCceeeecchhhhccCcccceecCCCCcc
Confidence 8888877666777888888888888888765443 3567788888888888888877677888888888888888888
Q ss_pred cccCCCCCccCCCCcccccCCcCCCC
Q 044615 351 QGLIPNSTAFRDAPMLALQGNKRLCG 376 (571)
Q Consensus 351 ~~~~~~~~~~~~~~~l~l~~n~~~c~ 376 (571)
..+.|+...-..++.+.+.....+|.
T Consensus 429 aSIq~nAFe~m~Lk~Lv~nSssflCD 454 (873)
T KOG4194|consen 429 ASIQPNAFEPMELKELVMNSSSFLCD 454 (873)
T ss_pred eeecccccccchhhhhhhcccceEEe
Confidence 87777643333566666666556664
No 4
>KOG4194 consensus Membrane glycoprotein LIG-1 [Signal transduction mechanisms]
Probab=100.00 E-value=5.4e-35 Score=287.55 Aligned_cols=323 Identities=25% Similarity=0.252 Sum_probs=218.5
Q ss_pred CEEEccCCccc------cCCCCccceeecccccccCCCCC---------------CCc-cccccccCCCCCCEEecccCc
Q 044615 51 RDTSISFDELH------EKLLTFEATAHFSVLAFTGQDWP---------------LYS-SIPDEIGNMKSLSDLQLSENI 108 (571)
Q Consensus 51 ~~l~l~~n~l~------~~~l~~l~~l~l~~n~l~~~~~~---------------~~~-~~p~~~~~l~~L~~L~L~~n~ 108 (571)
+.|++++|.++ |.++++|+..++..|.++.+... .+. .-.+.++.++.|+.||||.|.
T Consensus 81 ~~LdlsnNkl~~id~~~f~nl~nLq~v~l~~N~Lt~IP~f~~~sghl~~L~L~~N~I~sv~se~L~~l~alrslDLSrN~ 160 (873)
T KOG4194|consen 81 QTLDLSNNKLSHIDFEFFYNLPNLQEVNLNKNELTRIPRFGHESGHLEKLDLRHNLISSVTSEELSALPALRSLDLSRNL 160 (873)
T ss_pred eeeeccccccccCcHHHHhcCCcceeeeeccchhhhcccccccccceeEEeeeccccccccHHHHHhHhhhhhhhhhhch
Confidence 45777777666 55666777777766666631000 000 112233444555555555555
Q ss_pred CcccccccccCCCCCCEEEcccCcCcccccccccCCCCCCeeecccCcCcccCCccccCCCCCCEEEccCCCCCccCChh
Q 044615 109 LNGSIPLALGNLTNLVVLDLSTNKLSGSIPLSFANLTSLSILYLYENSLCDSIPKEIGNMNSLSILDLSSNKLNGSIPLS 188 (571)
Q Consensus 109 i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~ 188 (571)
|+.+...+|..-.++++|+|++|.|+..-.+.|..+.+|..|.|+.|+++...+..|.+|++|+.|+|..|+|.-.--..
T Consensus 161 is~i~~~sfp~~~ni~~L~La~N~It~l~~~~F~~lnsL~tlkLsrNrittLp~r~Fk~L~~L~~LdLnrN~irive~lt 240 (873)
T KOG4194|consen 161 ISEIPKPSFPAKVNIKKLNLASNRITTLETGHFDSLNSLLTLKLSRNRITTLPQRSFKRLPKLESLDLNRNRIRIVEGLT 240 (873)
T ss_pred hhcccCCCCCCCCCceEEeeccccccccccccccccchheeeecccCcccccCHHHhhhcchhhhhhccccceeeehhhh
Confidence 54333334444445555555555555555555555555555555555555444445555555555555555554222334
Q ss_pred hhhccCCCcEEEccCCcccccCCccccCCCCCcEEeCccCcCcCCCChhhhCCCCCCEEEcccCccccccchhhccCCCC
Q 044615 189 LANLTNSLKVLYLSSNHIVGEIPLGHGMLSSLIQLTLNNNELSGQLSPELGSLIQLEYLDLSANTFHKSIPESLSNLVKL 268 (571)
Q Consensus 189 ~~~l~~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L 268 (571)
|..+.+ |+.|.+..|.+.......|..+.+++.|+|..|++...-..++.+++.|+.|++|+|.+....+++...+++|
T Consensus 241 FqgL~S-l~nlklqrN~I~kL~DG~Fy~l~kme~l~L~~N~l~~vn~g~lfgLt~L~~L~lS~NaI~rih~d~WsftqkL 319 (873)
T KOG4194|consen 241 FQGLPS-LQNLKLQRNDISKLDDGAFYGLEKMEHLNLETNRLQAVNEGWLFGLTSLEQLDLSYNAIQRIHIDSWSFTQKL 319 (873)
T ss_pred hcCchh-hhhhhhhhcCcccccCcceeeecccceeecccchhhhhhcccccccchhhhhccchhhhheeecchhhhcccc
Confidence 444443 6666666666655555667777888888888888887777788888888999999998888888888888899
Q ss_pred CEEEcCCccCccCcchhhhcccCCCEEEccCCcCCcccchhccCCCCCCEEEccCCcCcccccc---ccccCCCCCEEEC
Q 044615 269 HYLNLSNNQFSQKIPNKIEKLIHLSELDLSHNIFREEIPSQICSMQSLEKLNLSHNNLSGSIPR---CFEEMHWLSCIDI 345 (571)
Q Consensus 269 ~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~---~~~~l~~L~~L~l 345 (571)
++|+|+.|+++...+..|..+..|++|+|++|++...-...|..+.+|++|||++|.|++.+.+ .|..++.|+.|++
T Consensus 320 ~~LdLs~N~i~~l~~~sf~~L~~Le~LnLs~Nsi~~l~e~af~~lssL~~LdLr~N~ls~~IEDaa~~f~gl~~LrkL~l 399 (873)
T KOG4194|consen 320 KELDLSSNRITRLDEGSFRVLSQLEELNLSHNSIDHLAEGAFVGLSSLHKLDLRSNELSWCIEDAAVAFNGLPSLRKLRL 399 (873)
T ss_pred eeEeccccccccCChhHHHHHHHhhhhcccccchHHHHhhHHHHhhhhhhhcCcCCeEEEEEecchhhhccchhhhheee
Confidence 9999999999888888888888999999999988877777888899999999999998876654 5778899999999
Q ss_pred cCCcCcccCCC-CCccCCCCcccccCCcCC
Q 044615 346 SYNALQGLIPN-STAFRDAPMLALQGNKRL 374 (571)
Q Consensus 346 s~N~l~~~~~~-~~~~~~~~~l~l~~n~~~ 374 (571)
.+|++..+... ...+..+..+++.+|+..
T Consensus 400 ~gNqlk~I~krAfsgl~~LE~LdL~~Naia 429 (873)
T KOG4194|consen 400 TGNQLKSIPKRAFSGLEALEHLDLGDNAIA 429 (873)
T ss_pred cCceeeecchhhhccCcccceecCCCCcce
Confidence 99998866543 455677888888888754
No 5
>KOG0444 consensus Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton]
Probab=99.97 E-value=6.2e-34 Score=281.91 Aligned_cols=335 Identities=28% Similarity=0.320 Sum_probs=289.6
Q ss_pred HHHHhhccCCCCCchhhcCCCCCCEEEccCCccc-----cCCCCccceeecccccccCCCCCCCccccccccCCCCCCEE
Q 044615 28 DLIEKILDGLGDDYKELVRAVQARDTSISFDELH-----EKLLTFEATAHFSVLAFTGQDWPLYSSIPDEIGNMKSLSDL 102 (571)
Q Consensus 28 ~~~~~~~~~~~~~~~~l~~~~~l~~l~l~~n~l~-----~~~l~~l~~l~l~~n~l~~~~~~~~~~~p~~~~~l~~L~~L 102 (571)
.+++....++..+|++++++.+|+.|.+++|++. .+.++.|+.+.++.|++.. +.+|+.+..+..|+.|
T Consensus 35 ~WLkLnrt~L~~vPeEL~~lqkLEHLs~~HN~L~~vhGELs~Lp~LRsv~~R~N~LKn------sGiP~diF~l~dLt~l 108 (1255)
T KOG0444|consen 35 TWLKLNRTKLEQVPEELSRLQKLEHLSMAHNQLISVHGELSDLPRLRSVIVRDNNLKN------SGIPTDIFRLKDLTIL 108 (1255)
T ss_pred eEEEechhhhhhChHHHHHHhhhhhhhhhhhhhHhhhhhhccchhhHHHhhhcccccc------CCCCchhcccccceee
Confidence 3334345677888999999999999999999988 6788899999999999976 2589999999999999
Q ss_pred ecccCcCcccccccccCCCCCCEEEcccCcCcccccccccCCCCCCeeecccCcCcccCCccccCCCCCCEEEccCCCCC
Q 044615 103 QLSENILNGSIPLALGNLTNLVVLDLSTNKLSGSIPLSFANLTSLSILYLYENSLCDSIPKEIGNMNSLSILDLSSNKLN 182 (571)
Q Consensus 103 ~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~ 182 (571)
|||+|++. ..|..+..-+++-+|+|++|+|..++...|.+|+.|-+|+|++|++. .+|..+..|..|++|+|++|.+.
T Consensus 109 DLShNqL~-EvP~~LE~AKn~iVLNLS~N~IetIPn~lfinLtDLLfLDLS~NrLe-~LPPQ~RRL~~LqtL~Ls~NPL~ 186 (1255)
T KOG0444|consen 109 DLSHNQLR-EVPTNLEYAKNSIVLNLSYNNIETIPNSLFINLTDLLFLDLSNNRLE-MLPPQIRRLSMLQTLKLSNNPLN 186 (1255)
T ss_pred ecchhhhh-hcchhhhhhcCcEEEEcccCccccCCchHHHhhHhHhhhccccchhh-hcCHHHHHHhhhhhhhcCCChhh
Confidence 99999998 88999999999999999999998666667889999999999999995 57778999999999999999886
Q ss_pred ccCChhhhhccCCCcEEEccCCccc-ccCCccccCCCCCcEEeCccCcCcCCCChhhhCCCCCCEEEcccCccccccchh
Q 044615 183 GSIPLSLANLTNSLKVLYLSSNHIV-GEIPLGHGMLSSLIQLTLNNNELSGQLSPELGSLIQLEYLDLSANTFHKSIPES 261 (571)
Q Consensus 183 ~~~p~~~~~l~~~L~~L~l~~n~~~-~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~ 261 (571)
...-..+..++. |++|.+++.+-+ ..+|..+..+.+|..++++.|.+. ..|..+..+++|+.|+||+|.++. +...
T Consensus 187 hfQLrQLPsmts-L~vLhms~TqRTl~N~Ptsld~l~NL~dvDlS~N~Lp-~vPecly~l~~LrrLNLS~N~ite-L~~~ 263 (1255)
T KOG0444|consen 187 HFQLRQLPSMTS-LSVLHMSNTQRTLDNIPTSLDDLHNLRDVDLSENNLP-IVPECLYKLRNLRRLNLSGNKITE-LNMT 263 (1255)
T ss_pred HHHHhcCccchh-hhhhhcccccchhhcCCCchhhhhhhhhccccccCCC-cchHHHhhhhhhheeccCcCceee-eecc
Confidence 432223334454 888999886654 357888999999999999999998 688999999999999999999974 4455
Q ss_pred hccCCCCCEEEcCCccCccCcchhhhcccCCCEEEccCCcCCc-ccchhccCCCCCCEEEccCCcCccccccccccCCCC
Q 044615 262 LSNLVKLHYLNLSNNQFSQKIPNKIEKLIHLSELDLSHNIFRE-EIPSQICSMQSLEKLNLSHNNLSGSIPRCFEEMHWL 340 (571)
Q Consensus 262 l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~-~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L 340 (571)
.....+|++|++|.|+++ .+|..+..++.|+.|++.+|+++- -+|+.++.+.+|+.+..++|.+. ..|+.++.+..|
T Consensus 264 ~~~W~~lEtLNlSrNQLt-~LP~avcKL~kL~kLy~n~NkL~FeGiPSGIGKL~~Levf~aanN~LE-lVPEglcRC~kL 341 (1255)
T KOG0444|consen 264 EGEWENLETLNLSRNQLT-VLPDAVCKLTKLTKLYANNNKLTFEGIPSGIGKLIQLEVFHAANNKLE-LVPEGLCRCVKL 341 (1255)
T ss_pred HHHHhhhhhhccccchhc-cchHHHhhhHHHHHHHhccCcccccCCccchhhhhhhHHHHhhccccc-cCchhhhhhHHH
Confidence 667789999999999998 789999999999999999998763 38889999999999999999997 889999999999
Q ss_pred CEEECcCCcCcccCCCCCccCCCCcccccCCcCCC
Q 044615 341 SCIDISYNALQGLIPNSTAFRDAPMLALQGNKRLC 375 (571)
Q Consensus 341 ~~L~ls~N~l~~~~~~~~~~~~~~~l~l~~n~~~c 375 (571)
+.|.|+.|.+-..+.....+..+..+++..|+.+-
T Consensus 342 ~kL~L~~NrLiTLPeaIHlL~~l~vLDlreNpnLV 376 (1255)
T KOG0444|consen 342 QKLKLDHNRLITLPEAIHLLPDLKVLDLRENPNLV 376 (1255)
T ss_pred HHhcccccceeechhhhhhcCCcceeeccCCcCcc
Confidence 99999999998887777778889999999998654
No 6
>KOG0444 consensus Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton]
Probab=99.94 E-value=2.9e-29 Score=248.94 Aligned_cols=302 Identities=29% Similarity=0.380 Sum_probs=260.5
Q ss_pred CchhhcCCCCCCEEEccCCccc-------cCCCCccceeecccccccCCCCCCCccccccccCCCCCCEEecccCcCccc
Q 044615 40 DYKELVRAVQARDTSISFDELH-------EKLLTFEATAHFSVLAFTGQDWPLYSSIPDEIGNMKSLSDLQLSENILNGS 112 (571)
Q Consensus 40 ~~~~l~~~~~l~~l~l~~n~l~-------~~~l~~l~~l~l~~n~l~~~~~~~~~~~p~~~~~l~~L~~L~L~~n~i~~~ 112 (571)
+.-+++.++.|+.+.+..|++. +..+..|+.|||++|++. ++|..+..-+++-+|+||+|+|..+
T Consensus 70 vhGELs~Lp~LRsv~~R~N~LKnsGiP~diF~l~dLt~lDLShNqL~--------EvP~~LE~AKn~iVLNLS~N~IetI 141 (1255)
T KOG0444|consen 70 VHGELSDLPRLRSVIVRDNNLKNSGIPTDIFRLKDLTILDLSHNQLR--------EVPTNLEYAKNSIVLNLSYNNIETI 141 (1255)
T ss_pred hhhhhccchhhHHHhhhccccccCCCCchhcccccceeeecchhhhh--------hcchhhhhhcCcEEEEcccCccccC
Confidence 3556788888999999999888 667889999999999998 4899998889999999999999865
Q ss_pred ccccccCCCCCCEEEcccCcCcccccccccCCCCCCeeecccCcCcccCCccccCCCCCCEEEccCCCCC-ccCChhhhh
Q 044615 113 IPLALGNLTNLVVLDLSTNKLSGSIPLSFANLTSLSILYLYENSLCDSIPKEIGNMNSLSILDLSSNKLN-GSIPLSLAN 191 (571)
Q Consensus 113 ~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~-~~~p~~~~~ 191 (571)
....|.+|+.|-.|||++|++. ..|+.+..|.+|++|.|++|.+...--..+-.+++|++|.+++.+-+ ..+|.++..
T Consensus 142 Pn~lfinLtDLLfLDLS~NrLe-~LPPQ~RRL~~LqtL~Ls~NPL~hfQLrQLPsmtsL~vLhms~TqRTl~N~Ptsld~ 220 (1255)
T KOG0444|consen 142 PNSLFINLTDLLFLDLSNNRLE-MLPPQIRRLSMLQTLKLSNNPLNHFQLRQLPSMTSLSVLHMSNTQRTLDNIPTSLDD 220 (1255)
T ss_pred CchHHHhhHhHhhhccccchhh-hcCHHHHHHhhhhhhhcCCChhhHHHHhcCccchhhhhhhcccccchhhcCCCchhh
Confidence 5566789999999999999997 67778899999999999999986433344556778889999887643 368888888
Q ss_pred ccCCCcEEEccCCcccccCCccccCCCCCcEEeCccCcCcCCCChhhhCCCCCCEEEcccCccccccchhhccCCCCCEE
Q 044615 192 LTNSLKVLYLSSNHIVGEIPLGHGMLSSLIQLTLNNNELSGQLSPELGSLIQLEYLDLSANTFHKSIPESLSNLVKLHYL 271 (571)
Q Consensus 192 l~~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L 271 (571)
+.+ |..+++|.|.+. ..|..+..+.+|+.|+|++|+++. +....+...+|+.|+||.|.++ .+|.++..+++|+.|
T Consensus 221 l~N-L~dvDlS~N~Lp-~vPecly~l~~LrrLNLS~N~ite-L~~~~~~W~~lEtLNlSrNQLt-~LP~avcKL~kL~kL 296 (1255)
T KOG0444|consen 221 LHN-LRDVDLSENNLP-IVPECLYKLRNLRRLNLSGNKITE-LNMTEGEWENLETLNLSRNQLT-VLPDAVCKLTKLTKL 296 (1255)
T ss_pred hhh-hhhccccccCCC-cchHHHhhhhhhheeccCcCceee-eeccHHHHhhhhhhccccchhc-cchHHHhhhHHHHHH
Confidence 886 999999999997 789999999999999999999984 4555666788999999999997 789999999999999
Q ss_pred EcCCccCcc-CcchhhhcccCCCEEEccCCcCCcccchhccCCCCCCEEEccCCcCccccccccccCCCCCEEECcCCcC
Q 044615 272 NLSNNQFSQ-KIPNKIEKLIHLSELDLSHNIFREEIPSQICSMQSLEKLNLSHNNLSGSIPRCFEEMHWLSCIDISYNAL 350 (571)
Q Consensus 272 ~Ls~n~l~~-~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~ls~N~l 350 (571)
.+.+|+++- -+|..++.+.+|+.+..++|.+ +.+|..++.+..|+.|.|++|++- .+|+.+.-++.|+.||+..|+-
T Consensus 297 y~n~NkL~FeGiPSGIGKL~~Levf~aanN~L-ElVPEglcRC~kL~kL~L~~NrLi-TLPeaIHlL~~l~vLDlreNpn 374 (1255)
T KOG0444|consen 297 YANNNKLTFEGIPSGIGKLIQLEVFHAANNKL-ELVPEGLCRCVKLQKLKLDHNRLI-TLPEAIHLLPDLKVLDLRENPN 374 (1255)
T ss_pred HhccCcccccCCccchhhhhhhHHHHhhcccc-ccCchhhhhhHHHHHhccccccee-echhhhhhcCCcceeeccCCcC
Confidence 999999863 4788999999999999999988 579999999999999999999997 6899999999999999999975
Q ss_pred cccCCC
Q 044615 351 QGLIPN 356 (571)
Q Consensus 351 ~~~~~~ 356 (571)
--.+|.
T Consensus 375 LVMPPK 380 (1255)
T KOG0444|consen 375 LVMPPK 380 (1255)
T ss_pred ccCCCC
Confidence 544554
No 7
>KOG0472 consensus Leucine-rich repeat protein [Function unknown]
Probab=99.94 E-value=3e-29 Score=237.12 Aligned_cols=328 Identities=29% Similarity=0.406 Sum_probs=176.6
Q ss_pred CCCCchhhcCCCCCCEEEccCCccc-----cCCCCccceeecccccccCC---------------CCCCCccccccccCC
Q 044615 37 LGDDYKELVRAVQARDTSISFDELH-----EKLLTFEATAHFSVLAFTGQ---------------DWPLYSSIPDEIGNM 96 (571)
Q Consensus 37 ~~~~~~~l~~~~~l~~l~l~~n~l~-----~~~l~~l~~l~l~~n~l~~~---------------~~~~~~~~p~~~~~l 96 (571)
+...|+.++.+.++..+++++|.+. ++.+..+..++...|+++.. ....+..+|...-++
T Consensus 103 ls~lp~~i~s~~~l~~l~~s~n~~~el~~~i~~~~~l~dl~~~~N~i~slp~~~~~~~~l~~l~~~~n~l~~l~~~~i~m 182 (565)
T KOG0472|consen 103 LSELPEQIGSLISLVKLDCSSNELKELPDSIGRLLDLEDLDATNNQISSLPEDMVNLSKLSKLDLEGNKLKALPENHIAM 182 (565)
T ss_pred HhhccHHHhhhhhhhhhhccccceeecCchHHHHhhhhhhhccccccccCchHHHHHHHHHHhhccccchhhCCHHHHHH
Confidence 3445666666666666666666555 34444455555555544420 000011233333334
Q ss_pred CCCCEEecccCcCcccccccccCCCCCCEEEcccCcCcccccccccCCCCCCeeecccCcCcccCCccc-cCCCCCCEEE
Q 044615 97 KSLSDLQLSENILNGSIPLALGNLTNLVVLDLSTNKLSGSIPLSFANLTSLSILYLYENSLCDSIPKEI-GNMNSLSILD 175 (571)
Q Consensus 97 ~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l-~~l~~L~~L~ 175 (571)
+.|+.||...|-+. .+|..++.+.+|.-|+|..|+|. ..| .|..+..|++|+++.|.+. .+|.+. ..+++|.+||
T Consensus 183 ~~L~~ld~~~N~L~-tlP~~lg~l~~L~~LyL~~Nki~-~lP-ef~gcs~L~Elh~g~N~i~-~lpae~~~~L~~l~vLD 258 (565)
T KOG0472|consen 183 KRLKHLDCNSNLLE-TLPPELGGLESLELLYLRRNKIR-FLP-EFPGCSLLKELHVGENQIE-MLPAEHLKHLNSLLVLD 258 (565)
T ss_pred HHHHhcccchhhhh-cCChhhcchhhhHHHHhhhcccc-cCC-CCCccHHHHHHHhcccHHH-hhHHHHhcccccceeee
Confidence 55555555555443 45555555555555555555554 333 4555555556666555554 334333 3666777777
Q ss_pred ccCCCCCccCChhhhhccCCCcEEEccCCcccccCCccccCCCCCcEEeCccCcCcCCC---------------------
Q 044615 176 LSSNKLNGSIPLSLANLTNSLKVLYLSSNHIVGEIPLGHGMLSSLIQLTLNNNELSGQL--------------------- 234 (571)
Q Consensus 176 L~~n~l~~~~p~~~~~l~~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~--------------------- 234 (571)
|.+|++. +.|+++.-+.+ |..||+|+|.|+ .+|..++++ .|+.|.+.+|.+...-
T Consensus 259 LRdNklk-e~Pde~clLrs-L~rLDlSNN~is-~Lp~sLgnl-hL~~L~leGNPlrTiRr~ii~~gT~~vLKyLrs~~~~ 334 (565)
T KOG0472|consen 259 LRDNKLK-EVPDEICLLRS-LERLDLSNNDIS-SLPYSLGNL-HLKFLALEGNPLRTIRREIISKGTQEVLKYLRSKIKD 334 (565)
T ss_pred ccccccc-cCchHHHHhhh-hhhhcccCCccc-cCCcccccc-eeeehhhcCCchHHHHHHHHcccHHHHHHHHHHhhcc
Confidence 7777776 66766665554 777777777776 455666666 6666666666542000
Q ss_pred ----------------Ch----hhhCCCCCC--------------------------EEEcccCccc-------------
Q 044615 235 ----------------SP----ELGSLIQLE--------------------------YLDLSANTFH------------- 255 (571)
Q Consensus 235 ----------------~~----~~~~l~~L~--------------------------~L~L~~n~l~------------- 255 (571)
+. ....+.+.+ ..+++.|++.
T Consensus 335 dglS~se~~~e~~~t~~~~~~~~~~~~i~tkiL~~s~~qlt~VPdEVfea~~~~~Vt~VnfskNqL~elPk~L~~lkelv 414 (565)
T KOG0472|consen 335 DGLSQSEGGTETAMTLPSESFPDIYAIITTKILDVSDKQLTLVPDEVFEAAKSEIVTSVNFSKNQLCELPKRLVELKELV 414 (565)
T ss_pred CCCCCCcccccccCCCCCCcccchhhhhhhhhhcccccccccCCHHHHHHhhhcceEEEecccchHhhhhhhhHHHHHHH
Confidence 00 000011122 2223333321
Q ss_pred ----------cccchhhccCCCCCEEEcCCccCccCcchhhhcccCCCEEEccCCcCCcccchhccCCCCCCEEEccCCc
Q 044615 256 ----------KSIPESLSNLVKLHYLNLSNNQFSQKIPNKIEKLIHLSELDLSHNIFREEIPSQICSMQSLEKLNLSHNN 325 (571)
Q Consensus 256 ----------~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~ 325 (571)
+.+|..++.+++|..|+|++|.+. .+|..++.+..|+.|+++.|++.. +|..+..+..|+.+-.++|+
T Consensus 415 T~l~lsnn~isfv~~~l~~l~kLt~L~L~NN~Ln-~LP~e~~~lv~Lq~LnlS~NrFr~-lP~~~y~lq~lEtllas~nq 492 (565)
T KOG0472|consen 415 TDLVLSNNKISFVPLELSQLQKLTFLDLSNNLLN-DLPEEMGSLVRLQTLNLSFNRFRM-LPECLYELQTLETLLASNNQ 492 (565)
T ss_pred HHHHhhcCccccchHHHHhhhcceeeecccchhh-hcchhhhhhhhhheeccccccccc-chHHHhhHHHHHHHHhcccc
Confidence 112223334445555555554443 344444444445555555554432 44444444444444444455
Q ss_pred CccccccccccCCCCCEEECcCCcCcccCCCCCccCCCCcccccCCcCC
Q 044615 326 LSGSIPRCFEEMHWLSCIDISYNALQGLIPNSTAFRDAPMLALQGNKRL 374 (571)
Q Consensus 326 l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~~~~~~~~~~~l~l~~n~~~ 374 (571)
+....|+.+.++.+|..|||.+|.+..++|....+.++..+.+.||++.
T Consensus 493 i~~vd~~~l~nm~nL~tLDL~nNdlq~IPp~LgnmtnL~hLeL~gNpfr 541 (565)
T KOG0472|consen 493 IGSVDPSGLKNMRNLTTLDLQNNDLQQIPPILGNMTNLRHLELDGNPFR 541 (565)
T ss_pred ccccChHHhhhhhhcceeccCCCchhhCChhhccccceeEEEecCCccC
Confidence 5545555577888899999999999988888888888999999999854
No 8
>KOG0472 consensus Leucine-rich repeat protein [Function unknown]
Probab=99.93 E-value=4.4e-28 Score=229.25 Aligned_cols=269 Identities=30% Similarity=0.442 Sum_probs=220.3
Q ss_pred CCccceeecccccccCCCCCCCccccccccCCCCCCEEecccCcCcccccccccCCCCCCEEEcccCcCccccccccc-C
Q 044615 65 LTFEATAHFSVLAFTGQDWPLYSSIPDEIGNMKSLSDLQLSENILNGSIPLALGNLTNLVVLDLSTNKLSGSIPLSFA-N 143 (571)
Q Consensus 65 l~~l~~l~l~~n~l~~~~~~~~~~~p~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~-~ 143 (571)
++.|+.+|...|.+. .+|+.++.+.+|.-|+|.+|.+. .+| .|.+++.|..|++..|.|+ .+|...+ +
T Consensus 182 m~~L~~ld~~~N~L~--------tlP~~lg~l~~L~~LyL~~Nki~-~lP-ef~gcs~L~Elh~g~N~i~-~lpae~~~~ 250 (565)
T KOG0472|consen 182 MKRLKHLDCNSNLLE--------TLPPELGGLESLELLYLRRNKIR-FLP-EFPGCSLLKELHVGENQIE-MLPAEHLKH 250 (565)
T ss_pred HHHHHhcccchhhhh--------cCChhhcchhhhHHHHhhhcccc-cCC-CCCccHHHHHHHhcccHHH-hhHHHHhcc
Confidence 444555555554444 68999999999999999999997 677 8999999999999999998 6666655 9
Q ss_pred CCCCCeeecccCcCcccCCccccCCCCCCEEEccCCCCCccCChhhhhccCCCcEEEccCCcccccC-------------
Q 044615 144 LTSLSILYLYENSLCDSIPKEIGNMNSLSILDLSSNKLNGSIPLSLANLTNSLKVLYLSSNHIVGEI------------- 210 (571)
Q Consensus 144 l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~~L~~L~l~~n~~~~~~------------- 210 (571)
+++|..|||..|++. ..|+++.-+.+|.+||+++|.++ .+|.+++++ . |+.|-+.+|.+...-
T Consensus 251 L~~l~vLDLRdNklk-e~Pde~clLrsL~rLDlSNN~is-~Lp~sLgnl-h-L~~L~leGNPlrTiRr~ii~~gT~~vLK 326 (565)
T KOG0472|consen 251 LNSLLVLDLRDNKLK-EVPDEICLLRSLERLDLSNNDIS-SLPYSLGNL-H-LKFLALEGNPLRTIRREIISKGTQEVLK 326 (565)
T ss_pred cccceeeeccccccc-cCchHHHHhhhhhhhcccCCccc-cCCcccccc-e-eeehhhcCCchHHHHHHHHcccHHHHHH
Confidence 999999999999996 68999999999999999999999 689899998 3 999999999863100
Q ss_pred -------------------------Cccc---cCCC--------------------------CCcEEeCccCcCc-----
Q 044615 211 -------------------------PLGH---GMLS--------------------------SLIQLTLNNNELS----- 231 (571)
Q Consensus 211 -------------------------~~~~---~~l~--------------------------~L~~L~l~~n~l~----- 231 (571)
+..+ ..+- -....+++.|++.
T Consensus 327 yLrs~~~~dglS~se~~~e~~~t~~~~~~~~~~~~i~tkiL~~s~~qlt~VPdEVfea~~~~~Vt~VnfskNqL~elPk~ 406 (565)
T KOG0472|consen 327 YLRSKIKDDGLSQSEGGTETAMTLPSESFPDIYAIITTKILDVSDKQLTLVPDEVFEAAKSEIVTSVNFSKNQLCELPKR 406 (565)
T ss_pred HHHHhhccCCCCCCcccccccCCCCCCcccchhhhhhhhhhcccccccccCCHHHHHHhhhcceEEEecccchHhhhhhh
Confidence 0000 0000 1334455555443
Q ss_pred ------------------CCCChhhhCCCCCCEEEcccCccccccchhhccCCCCCEEEcCCccCccCcchhhhcccCCC
Q 044615 232 ------------------GQLSPELGSLIQLEYLDLSANTFHKSIPESLSNLVKLHYLNLSNNQFSQKIPNKIEKLIHLS 293 (571)
Q Consensus 232 ------------------~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~ 293 (571)
+.+|..+..+++|..|+|++|.+. .+|..++.+..|+.|+++.|++. ..|..+..+..++
T Consensus 407 L~~lkelvT~l~lsnn~isfv~~~l~~l~kLt~L~L~NN~Ln-~LP~e~~~lv~Lq~LnlS~NrFr-~lP~~~y~lq~lE 484 (565)
T KOG0472|consen 407 LVELKELVTDLVLSNNKISFVPLELSQLQKLTFLDLSNNLLN-DLPEEMGSLVRLQTLNLSFNRFR-MLPECLYELQTLE 484 (565)
T ss_pred hHHHHHHHHHHHhhcCccccchHHHHhhhcceeeecccchhh-hcchhhhhhhhhheecccccccc-cchHHHhhHHHHH
Confidence 244556778899999999999886 67888999999999999999997 6888888888888
Q ss_pred EEEccCCcCCcccchhccCCCCCCEEEccCCcCccccccccccCCCCCEEECcCCcCc
Q 044615 294 ELDLSHNIFREEIPSQICSMQSLEKLNLSHNNLSGSIPRCFEEMHWLSCIDISYNALQ 351 (571)
Q Consensus 294 ~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~ls~N~l~ 351 (571)
.+-.++|++....+..+.+|.+|..|||.+|.+. .+|..+.++.+|++|++++|+|.
T Consensus 485 tllas~nqi~~vd~~~l~nm~nL~tLDL~nNdlq-~IPp~LgnmtnL~hLeL~gNpfr 541 (565)
T KOG0472|consen 485 TLLASNNQIGSVDPSGLKNMRNLTTLDLQNNDLQ-QIPPILGNMTNLRHLELDGNPFR 541 (565)
T ss_pred HHHhccccccccChHHhhhhhhcceeccCCCchh-hCChhhccccceeEEEecCCccC
Confidence 8888889998877777999999999999999998 78889999999999999999998
No 9
>PLN03210 Resistant to P. syringae 6; Provisional
Probab=99.90 E-value=3e-22 Score=230.50 Aligned_cols=310 Identities=23% Similarity=0.232 Sum_probs=176.0
Q ss_pred chhhcCCCCCCEEEccCCccc------------cCCC-CccceeecccccccCCCCCCCccccccccCCCCCCEEecccC
Q 044615 41 YKELVRAVQARDTSISFDELH------------EKLL-TFEATAHFSVLAFTGQDWPLYSSIPDEIGNMKSLSDLQLSEN 107 (571)
Q Consensus 41 ~~~l~~~~~l~~l~l~~n~l~------------~~~l-~~l~~l~l~~n~l~~~~~~~~~~~p~~~~~l~~L~~L~L~~n 107 (571)
+..+..+.+|+.|.+..+... +..+ ..|+.|++..+.+. .+|..| ...+|++|+|++|
T Consensus 551 ~~aF~~m~~L~~L~~~~~~~~~~~~~~~~lp~~~~~lp~~Lr~L~~~~~~l~--------~lP~~f-~~~~L~~L~L~~s 621 (1153)
T PLN03210 551 ENAFKGMRNLLFLKFYTKKWDQKKEVRWHLPEGFDYLPPKLRLLRWDKYPLR--------CMPSNF-RPENLVKLQMQGS 621 (1153)
T ss_pred HHHHhcCccccEEEEecccccccccceeecCcchhhcCcccEEEEecCCCCC--------CCCCcC-CccCCcEEECcCc
Confidence 455677778887777544211 1222 24566666555444 345444 2455666666665
Q ss_pred cCcccccccccCCCCCCEEEcccCcCcccccccccCCCCCCeeecccCcCcccCCccccCCCCCCEEEccCCCCCccCCh
Q 044615 108 ILNGSIPLALGNLTNLVVLDLSTNKLSGSIPLSFANLTSLSILYLYENSLCDSIPKEIGNMNSLSILDLSSNKLNGSIPL 187 (571)
Q Consensus 108 ~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~ 187 (571)
.+. .++..+..+++|+.|+|++|.....+| .++.+++|++|+|++|.....+|..+..+++|+.|++++|.....+|.
T Consensus 622 ~l~-~L~~~~~~l~~Lk~L~Ls~~~~l~~ip-~ls~l~~Le~L~L~~c~~L~~lp~si~~L~~L~~L~L~~c~~L~~Lp~ 699 (1153)
T PLN03210 622 KLE-KLWDGVHSLTGLRNIDLRGSKNLKEIP-DLSMATNLETLKLSDCSSLVELPSSIQYLNKLEDLDMSRCENLEILPT 699 (1153)
T ss_pred ccc-ccccccccCCCCCEEECCCCCCcCcCC-ccccCCcccEEEecCCCCccccchhhhccCCCCEEeCCCCCCcCccCC
Confidence 554 345555555566666665544333344 255555666666655554445555555556666666655543334444
Q ss_pred hhhhccCCCcEEEccCCcccccCCccccCCCCCcEEeCccCcCcCCCCh------------------------------h
Q 044615 188 SLANLTNSLKVLYLSSNHIVGEIPLGHGMLSSLIQLTLNNNELSGQLSP------------------------------E 237 (571)
Q Consensus 188 ~~~~l~~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~------------------------------~ 237 (571)
.+ ++.+ |+.|++++|.....+|.. .++|+.|++++|.+.. +|. .
T Consensus 700 ~i-~l~s-L~~L~Lsgc~~L~~~p~~---~~nL~~L~L~~n~i~~-lP~~~~l~~L~~L~l~~~~~~~l~~~~~~l~~~~ 773 (1153)
T PLN03210 700 GI-NLKS-LYRLNLSGCSRLKSFPDI---STNISWLDLDETAIEE-FPSNLRLENLDELILCEMKSEKLWERVQPLTPLM 773 (1153)
T ss_pred cC-CCCC-CCEEeCCCCCCccccccc---cCCcCeeecCCCcccc-ccccccccccccccccccchhhccccccccchhh
Confidence 33 3332 555555555433333321 2344455555554432 221 1
Q ss_pred hhCCCCCCEEEcccCccccccchhhccCCCCCEEEcCCccCccCcchhhhcccCCCEEEccCCcCCcccchhccCCCCCC
Q 044615 238 LGSLIQLEYLDLSANTFHKSIPESLSNLVKLHYLNLSNNQFSQKIPNKIEKLIHLSELDLSHNIFREEIPSQICSMQSLE 317 (571)
Q Consensus 238 ~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~ 317 (571)
+...++|+.|++++|.....+|.+++++++|+.|++++|...+.+|..+ .+++|+.|++++|.....+|.. .++|+
T Consensus 774 ~~~~~sL~~L~Ls~n~~l~~lP~si~~L~~L~~L~Ls~C~~L~~LP~~~-~L~sL~~L~Ls~c~~L~~~p~~---~~nL~ 849 (1153)
T PLN03210 774 TMLSPSLTRLFLSDIPSLVELPSSIQNLHKLEHLEIENCINLETLPTGI-NLESLESLDLSGCSRLRTFPDI---STNIS 849 (1153)
T ss_pred hhccccchheeCCCCCCccccChhhhCCCCCCEEECCCCCCcCeeCCCC-CccccCEEECCCCCcccccccc---ccccC
Confidence 2223567777777776666677777777778888877775444556544 5677777777776544444432 35677
Q ss_pred EEEccCCcCccccccccccCCCCCEEECcC-CcCcccCCCCCccCCCCcccccCCc
Q 044615 318 KLNLSHNNLSGSIPRCFEEMHWLSCIDISY-NALQGLIPNSTAFRDAPMLALQGNK 372 (571)
Q Consensus 318 ~L~Ls~n~l~~~~p~~~~~l~~L~~L~ls~-N~l~~~~~~~~~~~~~~~l~l~~n~ 372 (571)
.|+|++|.++ .+|.++..+++|+.|++++ |+++..++....+..+..+.+.++.
T Consensus 850 ~L~Ls~n~i~-~iP~si~~l~~L~~L~L~~C~~L~~l~~~~~~L~~L~~L~l~~C~ 904 (1153)
T PLN03210 850 DLNLSRTGIE-EVPWWIEKFSNLSFLDMNGCNNLQRVSLNISKLKHLETVDFSDCG 904 (1153)
T ss_pred EeECCCCCCc-cChHHHhcCCCCCEEECCCCCCcCccCcccccccCCCeeecCCCc
Confidence 7888888776 5677777788888888877 5666655555555666666665543
No 10
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms]
Probab=99.89 E-value=1.6e-25 Score=232.34 Aligned_cols=210 Identities=31% Similarity=0.383 Sum_probs=140.8
Q ss_pred CCCEEEccCCCCCccCChhhhhccCCCcEEEccCCcccc----------------------cCCccccCCCCCcEEeCcc
Q 044615 170 SLSILDLSSNKLNGSIPLSLANLTNSLKVLYLSSNHIVG----------------------EIPLGHGMLSSLIQLTLNN 227 (571)
Q Consensus 170 ~L~~L~L~~n~l~~~~p~~~~~l~~~L~~L~l~~n~~~~----------------------~~~~~~~~l~~L~~L~l~~ 227 (571)
+|+++++++|+++ .+|.++..+.+ |+.+...+|++.. -+|.....++.|++|+|..
T Consensus 242 nl~~~dis~n~l~-~lp~wi~~~~n-le~l~~n~N~l~~lp~ri~~~~~L~~l~~~~nel~yip~~le~~~sL~tLdL~~ 319 (1081)
T KOG0618|consen 242 NLQYLDISHNNLS-NLPEWIGACAN-LEALNANHNRLVALPLRISRITSLVSLSAAYNELEYIPPFLEGLKSLRTLDLQS 319 (1081)
T ss_pred cceeeecchhhhh-cchHHHHhccc-ceEecccchhHHhhHHHHhhhhhHHHHHhhhhhhhhCCCcccccceeeeeeehh
Confidence 5566666666665 45555555554 6666666666531 2333444566677777777
Q ss_pred CcCcCCCChhhh-------------------------CCCCCCEEEcccCccccccchhhccCCCCCEEEcCCccCccCc
Q 044615 228 NELSGQLSPELG-------------------------SLIQLEYLDLSANTFHKSIPESLSNLVKLHYLNLSNNQFSQKI 282 (571)
Q Consensus 228 n~l~~~~~~~~~-------------------------~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~ 282 (571)
|.+....+..+. .++.|+.|.+.+|.+++..-+.+.+..+|+.|+|++|++....
T Consensus 320 N~L~~lp~~~l~v~~~~l~~ln~s~n~l~~lp~~~e~~~~~Lq~LylanN~Ltd~c~p~l~~~~hLKVLhLsyNrL~~fp 399 (1081)
T KOG0618|consen 320 NNLPSLPDNFLAVLNASLNTLNVSSNKLSTLPSYEENNHAALQELYLANNHLTDSCFPVLVNFKHLKVLHLSYNRLNSFP 399 (1081)
T ss_pred ccccccchHHHhhhhHHHHHHhhhhccccccccccchhhHHHHHHHHhcCcccccchhhhccccceeeeeecccccccCC
Confidence 766643221111 1233556666667666666666777778888888888887555
Q ss_pred chhhhcccCCCEEEccCCcCCcccchhccCCCCCCEEEccCCcCccccccccccCCCCCEEECcCCcCcccC-CCCCccC
Q 044615 283 PNKIEKLIHLSELDLSHNIFREEIPSQICSMQSLEKLNLSHNNLSGSIPRCFEEMHWLSCIDISYNALQGLI-PNSTAFR 361 (571)
Q Consensus 283 ~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~-~~~~~~~ 361 (571)
...+.+++.|++|+||+|+++. +|..+..++.|+.|...+|++. ..| .+..++.|+.+|+|.|+++... |.....+
T Consensus 400 as~~~kle~LeeL~LSGNkL~~-Lp~tva~~~~L~tL~ahsN~l~-~fP-e~~~l~qL~~lDlS~N~L~~~~l~~~~p~p 476 (1081)
T KOG0618|consen 400 ASKLRKLEELEELNLSGNKLTT-LPDTVANLGRLHTLRAHSNQLL-SFP-ELAQLPQLKVLDLSCNNLSEVTLPEALPSP 476 (1081)
T ss_pred HHHHhchHHhHHHhcccchhhh-hhHHHHhhhhhHHHhhcCCcee-ech-hhhhcCcceEEecccchhhhhhhhhhCCCc
Confidence 5667778888888888888864 6677788888888888888876 556 7788999999999999998654 3333337
Q ss_pred CCCcccccCCcCCCCCCCCCCCC
Q 044615 362 DAPMLALQGNKRLCGDIKRLPPC 384 (571)
Q Consensus 362 ~~~~l~l~~n~~~c~~~~~~~~~ 384 (571)
+++.++++||.+.-.+.+.++.|
T Consensus 477 ~LkyLdlSGN~~l~~d~~~l~~l 499 (1081)
T KOG0618|consen 477 NLKYLDLSGNTRLVFDHKTLKVL 499 (1081)
T ss_pred ccceeeccCCcccccchhhhHHh
Confidence 89999999999765554444433
No 11
>KOG4237 consensus Extracellular matrix protein slit, contains leucine-rich and EGF-like repeats [Extracellular structures; Signal transduction mechanisms]
Probab=99.88 E-value=1e-24 Score=206.38 Aligned_cols=285 Identities=23% Similarity=0.240 Sum_probs=158.8
Q ss_pred cccccccCCCCCCEEecccCcCcccccccccCCCCCCEEEcccCcCcccccccccCCCCCCeeeccc-CcCcccCCcccc
Q 044615 88 SIPDEIGNMKSLSDLQLSENILNGSIPLALGNLTNLVVLDLSTNKLSGSIPLSFANLTSLSILYLYE-NSLCDSIPKEIG 166 (571)
Q Consensus 88 ~~p~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~-n~l~~~~~~~l~ 166 (571)
++|..+. +.-..|+|..|+|+.+.|.+|+.+++|+.|||++|.|+.+-|++|.++++|..|-+.+ |.|+....+.|.
T Consensus 60 eVP~~LP--~~tveirLdqN~I~~iP~~aF~~l~~LRrLdLS~N~Is~I~p~AF~GL~~l~~Lvlyg~NkI~~l~k~~F~ 137 (498)
T KOG4237|consen 60 EVPANLP--PETVEIRLDQNQISSIPPGAFKTLHRLRRLDLSKNNISFIAPDAFKGLASLLSLVLYGNNKITDLPKGAFG 137 (498)
T ss_pred cCcccCC--CcceEEEeccCCcccCChhhccchhhhceecccccchhhcChHhhhhhHhhhHHHhhcCCchhhhhhhHhh
Confidence 4555443 3456677777777766677777777777777777777777777777777776665555 667655445677
Q ss_pred CCCCCCEEEccCCCCCccCChhhhhccCCCcEEEccCCcccccCCccccCCCCCcEEeCccCcCc------------CCC
Q 044615 167 NMNSLSILDLSSNKLNGSIPLSLANLTNSLKVLYLSSNHIVGEIPLGHGMLSSLIQLTLNNNELS------------GQL 234 (571)
Q Consensus 167 ~l~~L~~L~L~~n~l~~~~p~~~~~l~~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~n~l~------------~~~ 234 (571)
+|..|+.|.+.-|++.....+.|..++. |..|.+..|.+.......+..+..++.+++..|.+. ...
T Consensus 138 gL~slqrLllNan~i~Cir~~al~dL~~-l~lLslyDn~~q~i~~~tf~~l~~i~tlhlA~np~icdCnL~wla~~~a~~ 216 (498)
T KOG4237|consen 138 GLSSLQRLLLNANHINCIRQDALRDLPS-LSLLSLYDNKIQSICKGTFQGLAAIKTLHLAQNPFICDCNLPWLADDLAMN 216 (498)
T ss_pred hHHHHHHHhcChhhhcchhHHHHHHhhh-cchhcccchhhhhhccccccchhccchHhhhcCccccccccchhhhHHhhc
Confidence 7777777777777776555556666664 777777777776444446666777777777666521 122
Q ss_pred ChhhhCCCCCCEEEcccCccccccchhhccC-CCCCEEEcCCccCccCcc-hhhhcccCCCEEEccCCcCCcccchhccC
Q 044615 235 SPELGSLIQLEYLDLSANTFHKSIPESLSNL-VKLHYLNLSNNQFSQKIP-NKIEKLIHLSELDLSHNIFREEIPSQICS 312 (571)
Q Consensus 235 ~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l-~~L~~L~Ls~n~l~~~~~-~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~ 312 (571)
|.+++.........+.++++....+..|... ..+.+--.+.+...+..| ..|..+++|+.|+|++|+++++-+.+|.+
T Consensus 217 ~ietsgarc~~p~rl~~~Ri~q~~a~kf~c~~esl~s~~~~~d~~d~~cP~~cf~~L~~L~~lnlsnN~i~~i~~~aFe~ 296 (498)
T KOG4237|consen 217 PIETSGARCVSPYRLYYKRINQEDARKFLCSLESLPSRLSSEDFPDSICPAKCFKKLPNLRKLNLSNNKITRIEDGAFEG 296 (498)
T ss_pred hhhcccceecchHHHHHHHhcccchhhhhhhHHhHHHhhccccCcCCcChHHHHhhcccceEeccCCCccchhhhhhhcc
Confidence 3334444333333344444333222222111 111111111111112222 34555555555555555555555555555
Q ss_pred CCCCCEEEccCCcCccccccccccCCCCCEEECcCCcCcccCCCC-CccCCCCcccccCCcCCC
Q 044615 313 MQSLEKLNLSHNNLSGSIPRCFEEMHWLSCIDISYNALQGLIPNS-TAFRDAPMLALQGNKRLC 375 (571)
Q Consensus 313 l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~~~-~~~~~~~~l~l~~n~~~c 375 (571)
...+++|.|..|+|.......|.++..|+.|+|.+|+|+...|.. .....+..+.+-+||+.|
T Consensus 297 ~a~l~eL~L~~N~l~~v~~~~f~~ls~L~tL~L~~N~it~~~~~aF~~~~~l~~l~l~~Np~~C 360 (498)
T KOG4237|consen 297 AAELQELYLTRNKLEFVSSGMFQGLSGLKTLSLYDNQITTVAPGAFQTLFSLSTLNLLSNPFNC 360 (498)
T ss_pred hhhhhhhhcCcchHHHHHHHhhhccccceeeeecCCeeEEEecccccccceeeeeehccCcccC
Confidence 555555555555555555555555555555555555555554431 222334445555555555
No 12
>PLN03210 Resistant to P. syringae 6; Provisional
Probab=99.88 E-value=2.6e-21 Score=222.83 Aligned_cols=289 Identities=22% Similarity=0.210 Sum_probs=210.3
Q ss_pred chhhcCC-CCCCEEEccCCccc----cCCCCccceeecccccccCCCCCCCccccccccCCCCCCEEecccCcCcccccc
Q 044615 41 YKELVRA-VQARDTSISFDELH----EKLLTFEATAHFSVLAFTGQDWPLYSSIPDEIGNMKSLSDLQLSENILNGSIPL 115 (571)
Q Consensus 41 ~~~l~~~-~~l~~l~l~~n~l~----~~~l~~l~~l~l~~n~l~~~~~~~~~~~p~~~~~l~~L~~L~L~~n~i~~~~~~ 115 (571)
|..+..+ .+|+.|++.++.+. .....+|+.|+++++++.. +|..+..+++|+.|+|+++.....+|
T Consensus 581 p~~~~~lp~~Lr~L~~~~~~l~~lP~~f~~~~L~~L~L~~s~l~~--------L~~~~~~l~~Lk~L~Ls~~~~l~~ip- 651 (1153)
T PLN03210 581 PEGFDYLPPKLRLLRWDKYPLRCMPSNFRPENLVKLQMQGSKLEK--------LWDGVHSLTGLRNIDLRGSKNLKEIP- 651 (1153)
T ss_pred CcchhhcCcccEEEEecCCCCCCCCCcCCccCCcEEECcCccccc--------cccccccCCCCCEEECCCCCCcCcCC-
Confidence 4444444 35777777777655 1245677778887777653 56666777888888887765444555
Q ss_pred cccCCCCCCEEEcccCcCcccccccccCCCCCCeeecccCcCcccCCccccCCCCCCEEEccCCCCCccCChhhhhccCC
Q 044615 116 ALGNLTNLVVLDLSTNKLSGSIPLSFANLTSLSILYLYENSLCDSIPKEIGNMNSLSILDLSSNKLNGSIPLSLANLTNS 195 (571)
Q Consensus 116 ~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~~ 195 (571)
.++.+++|++|+|++|.....+|..+.++++|+.|++++|.....+|..+ ++++|+.|++++|.....+|.. ..+
T Consensus 652 ~ls~l~~Le~L~L~~c~~L~~lp~si~~L~~L~~L~L~~c~~L~~Lp~~i-~l~sL~~L~Lsgc~~L~~~p~~----~~n 726 (1153)
T PLN03210 652 DLSMATNLETLKLSDCSSLVELPSSIQYLNKLEDLDMSRCENLEILPTGI-NLKSLYRLNLSGCSRLKSFPDI----STN 726 (1153)
T ss_pred ccccCCcccEEEecCCCCccccchhhhccCCCCEEeCCCCCCcCccCCcC-CCCCCCEEeCCCCCCccccccc----cCC
Confidence 36777788888887776656777777788888888887765555666554 6777777777777654444432 224
Q ss_pred CcEEEccCCcccccCCcc------------------------------ccCCCCCcEEeCccCcCcCCCChhhhCCCCCC
Q 044615 196 LKVLYLSSNHIVGEIPLG------------------------------HGMLSSLIQLTLNNNELSGQLSPELGSLIQLE 245 (571)
Q Consensus 196 L~~L~l~~n~~~~~~~~~------------------------------~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~ 245 (571)
|+.|++++|.+.. +|.. ....++|+.|++++|.....+|..++++++|+
T Consensus 727 L~~L~L~~n~i~~-lP~~~~l~~L~~L~l~~~~~~~l~~~~~~l~~~~~~~~~sL~~L~Ls~n~~l~~lP~si~~L~~L~ 805 (1153)
T PLN03210 727 ISWLDLDETAIEE-FPSNLRLENLDELILCEMKSEKLWERVQPLTPLMTMLSPSLTRLFLSDIPSLVELPSSIQNLHKLE 805 (1153)
T ss_pred cCeeecCCCcccc-ccccccccccccccccccchhhccccccccchhhhhccccchheeCCCCCCccccChhhhCCCCCC
Confidence 7777777776642 3321 11235788999999988878999999999999
Q ss_pred EEEcccCccccccchhhccCCCCCEEEcCCccCccCcchhhhcccCCCEEEccCCcCCcccchhccCCCCCCEEEccCCc
Q 044615 246 YLDLSANTFHKSIPESLSNLVKLHYLNLSNNQFSQKIPNKIEKLIHLSELDLSHNIFREEIPSQICSMQSLEKLNLSHNN 325 (571)
Q Consensus 246 ~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~ 325 (571)
.|++++|...+.+|..+ ++++|+.|++++|.....+|.. ..+|+.|+|++|.+.. +|.++..+++|+.|++++|+
T Consensus 806 ~L~Ls~C~~L~~LP~~~-~L~sL~~L~Ls~c~~L~~~p~~---~~nL~~L~Ls~n~i~~-iP~si~~l~~L~~L~L~~C~ 880 (1153)
T PLN03210 806 HLEIENCINLETLPTGI-NLESLESLDLSGCSRLRTFPDI---STNISDLNLSRTGIEE-VPWWIEKFSNLSFLDMNGCN 880 (1153)
T ss_pred EEECCCCCCcCeeCCCC-CccccCEEECCCCCcccccccc---ccccCEeECCCCCCcc-ChHHHhcCCCCCEEECCCCC
Confidence 99999986555677665 7899999999998765555543 3689999999999975 78899999999999999954
Q ss_pred CccccccccccCCCCCEEECcCCc
Q 044615 326 LSGSIPRCFEEMHWLSCIDISYNA 349 (571)
Q Consensus 326 l~~~~p~~~~~l~~L~~L~ls~N~ 349 (571)
--..+|..+..++.|+.++++++.
T Consensus 881 ~L~~l~~~~~~L~~L~~L~l~~C~ 904 (1153)
T PLN03210 881 NLQRVSLNISKLKHLETVDFSDCG 904 (1153)
T ss_pred CcCccCcccccccCCCeeecCCCc
Confidence 434577788889999999998874
No 13
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms]
Probab=99.86 E-value=1.3e-23 Score=218.21 Aligned_cols=300 Identities=27% Similarity=0.305 Sum_probs=233.6
Q ss_pred CchhhcCCCCCCEEEccCCccc---cCCCCccceeecccccccCCCCCC------------Cc-cccccccCCCCCCEEe
Q 044615 40 DYKELVRAVQARDTSISFDELH---EKLLTFEATAHFSVLAFTGQDWPL------------YS-SIPDEIGNMKSLSDLQ 103 (571)
Q Consensus 40 ~~~~l~~~~~l~~l~l~~n~l~---~~~l~~l~~l~l~~n~l~~~~~~~------------~~-~~p~~~~~l~~L~~L~ 103 (571)
++.++..+.+ .|+|++|.+. ..++.+|+.+....|+++...... +. ..+ -..-.+|++++
T Consensus 172 ~~~~i~~l~~--~ldLr~N~~~~~dls~~~~l~~l~c~rn~ls~l~~~g~~l~~L~a~~n~l~~~~~--~p~p~nl~~~d 247 (1081)
T KOG0618|consen 172 FLIDIYNLTH--QLDLRYNEMEVLDLSNLANLEVLHCERNQLSELEISGPSLTALYADHNPLTTLDV--HPVPLNLQYLD 247 (1081)
T ss_pred hhcchhhhhe--eeecccchhhhhhhhhccchhhhhhhhcccceEEecCcchheeeeccCcceeecc--ccccccceeee
Confidence 3445555555 6888888777 556666666666666555311100 00 001 11225789999
Q ss_pred cccCcCcccccccccCCCCCCEEEcccCcCcccccccccCCCCCCeeecccCcCcccCCccccCCCCCCEEEccCCCCCc
Q 044615 104 LSENILNGSIPLALGNLTNLVVLDLSTNKLSGSIPLSFANLTSLSILYLYENSLCDSIPKEIGNMNSLSILDLSSNKLNG 183 (571)
Q Consensus 104 L~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~ 183 (571)
+++|+++ .+|..++.+.+|+.|+...|.++ ..|..+....+|+.|.+..|.+. -+|....+++.|++|+|..|++.
T Consensus 248 is~n~l~-~lp~wi~~~~nle~l~~n~N~l~-~lp~ri~~~~~L~~l~~~~nel~-yip~~le~~~sL~tLdL~~N~L~- 323 (1081)
T KOG0618|consen 248 ISHNNLS-NLPEWIGACANLEALNANHNRLV-ALPLRISRITSLVSLSAAYNELE-YIPPFLEGLKSLRTLDLQSNNLP- 323 (1081)
T ss_pred cchhhhh-cchHHHHhcccceEecccchhHH-hhHHHHhhhhhHHHHHhhhhhhh-hCCCcccccceeeeeeehhcccc-
Confidence 9999998 56788899999999999999995 77888888999999999999986 56777888999999999999997
Q ss_pred cCChhhhhccCC-CcEEEccCCcccccCCccccCCCCCcEEeCccCcCcCCCChhhhCCCCCCEEEcccCccccccchhh
Q 044615 184 SIPLSLANLTNS-LKVLYLSSNHIVGEIPLGHGMLSSLIQLTLNNNELSGQLSPELGSLIQLEYLDLSANTFHKSIPESL 262 (571)
Q Consensus 184 ~~p~~~~~l~~~-L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l 262 (571)
.+|+.+....+. |+.|+.+.|.+.......-..++.|+.|++.+|.+++...+.+.++++|+.|+|++|++.......+
T Consensus 324 ~lp~~~l~v~~~~l~~ln~s~n~l~~lp~~~e~~~~~Lq~LylanN~Ltd~c~p~l~~~~hLKVLhLsyNrL~~fpas~~ 403 (1081)
T KOG0618|consen 324 SLPDNFLAVLNASLNTLNVSSNKLSTLPSYEENNHAALQELYLANNHLTDSCFPVLVNFKHLKVLHLSYNRLNSFPASKL 403 (1081)
T ss_pred ccchHHHhhhhHHHHHHhhhhccccccccccchhhHHHHHHHHhcCcccccchhhhccccceeeeeecccccccCCHHHH
Confidence 677766655543 7888888888874443333456789999999999999888889999999999999999986666778
Q ss_pred ccCCCCCEEEcCCccCccCcchhhhcccCCCEEEccCCcCCcccchhccCCCCCCEEEccCCcCccccccccccCCCCCE
Q 044615 263 SNLVKLHYLNLSNNQFSQKIPNKIEKLIHLSELDLSHNIFREEIPSQICSMQSLEKLNLSHNNLSGSIPRCFEEMHWLSC 342 (571)
Q Consensus 263 ~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~ 342 (571)
.++..|+.|+||+|+++ .+|..+..++.|+.|...+|++.. .| .+..++.|+.+|+|.|+|+...-..-..-++|++
T Consensus 404 ~kle~LeeL~LSGNkL~-~Lp~tva~~~~L~tL~ahsN~l~~-fP-e~~~l~qL~~lDlS~N~L~~~~l~~~~p~p~Lky 480 (1081)
T KOG0618|consen 404 RKLEELEELNLSGNKLT-TLPDTVANLGRLHTLRAHSNQLLS-FP-ELAQLPQLKVLDLSCNNLSEVTLPEALPSPNLKY 480 (1081)
T ss_pred hchHHhHHHhcccchhh-hhhHHHHhhhhhHHHhhcCCceee-ch-hhhhcCcceEEecccchhhhhhhhhhCCCcccce
Confidence 99999999999999998 577899999999999999999864 66 7899999999999999998543332222388999
Q ss_pred EECcCCcC
Q 044615 343 IDISYNAL 350 (571)
Q Consensus 343 L~ls~N~l 350 (571)
||+++|.-
T Consensus 481 LdlSGN~~ 488 (1081)
T KOG0618|consen 481 LDLSGNTR 488 (1081)
T ss_pred eeccCCcc
Confidence 99999973
No 14
>PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional
Probab=99.86 E-value=4.5e-21 Score=205.56 Aligned_cols=259 Identities=24% Similarity=0.317 Sum_probs=193.0
Q ss_pred CCCEEEccCCccc---cCCCCccceeecccccccCCCCCCCccccccccCCCCCCEEecccCcCcccccccccCCCCCCE
Q 044615 49 QARDTSISFDELH---EKLLTFEATAHFSVLAFTGQDWPLYSSIPDEIGNMKSLSDLQLSENILNGSIPLALGNLTNLVV 125 (571)
Q Consensus 49 ~l~~l~l~~n~l~---~~~l~~l~~l~l~~n~l~~~~~~~~~~~p~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~ 125 (571)
.-..|+++.+.++ ......++.|++..|+++. +|.. +++|++|+|++|+++ .+|.. .++|+.
T Consensus 202 ~~~~LdLs~~~LtsLP~~l~~~L~~L~L~~N~Lt~--------LP~l---p~~Lk~LdLs~N~Lt-sLP~l---p~sL~~ 266 (788)
T PRK15387 202 GNAVLNVGESGLTTLPDCLPAHITTLVIPDNNLTS--------LPAL---PPELRTLEVSGNQLT-SLPVL---PPGLLE 266 (788)
T ss_pred CCcEEEcCCCCCCcCCcchhcCCCEEEccCCcCCC--------CCCC---CCCCcEEEecCCccC-cccCc---ccccce
Confidence 3567888888777 1123468888999888885 4542 478999999999988 45543 367889
Q ss_pred EEcccCcCcccccccccCCCCCCeeecccCcCcccCCccccCCCCCCEEEccCCCCCccCChhhhhccCCCcEEEccCCc
Q 044615 126 LDLSTNKLSGSIPLSFANLTSLSILYLYENSLCDSIPKEIGNMNSLSILDLSSNKLNGSIPLSLANLTNSLKVLYLSSNH 205 (571)
Q Consensus 126 L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~~L~~L~l~~n~ 205 (571)
|++++|.++ .+|.. ..+|+.|++++|.++. +|. .+++|+.|++++|++.+ +|. ++.+|+.|++++|.
T Consensus 267 L~Ls~N~L~-~Lp~l---p~~L~~L~Ls~N~Lt~-LP~---~p~~L~~LdLS~N~L~~-Lp~----lp~~L~~L~Ls~N~ 333 (788)
T PRK15387 267 LSIFSNPLT-HLPAL---PSGLCKLWIFGNQLTS-LPV---LPPGLQELSVSDNQLAS-LPA----LPSELCKLWAYNNQ 333 (788)
T ss_pred eeccCCchh-hhhhc---hhhcCEEECcCCcccc-ccc---cccccceeECCCCcccc-CCC----CcccccccccccCc
Confidence 999999887 34432 3568889999999874 454 34789999999999884 554 23348889999999
Q ss_pred ccccCCccccCCCCCcEEeCccCcCcCCCChhhhCCCCCCEEEcccCccccccchhhccCCCCCEEEcCCccCccCcchh
Q 044615 206 IVGEIPLGHGMLSSLIQLTLNNNELSGQLSPELGSLIQLEYLDLSANTFHKSIPESLSNLVKLHYLNLSNNQFSQKIPNK 285 (571)
Q Consensus 206 ~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~ 285 (571)
+++ +|. ...+|+.|++++|+++. +|.. .++|+.|++++|.+.. +|.. ..+|+.|++++|++++ +|..
T Consensus 334 L~~-LP~---lp~~Lq~LdLS~N~Ls~-LP~l---p~~L~~L~Ls~N~L~~-LP~l---~~~L~~LdLs~N~Lt~-LP~l 400 (788)
T PRK15387 334 LTS-LPT---LPSGLQELSVSDNQLAS-LPTL---PSELYKLWAYNNRLTS-LPAL---PSGLKELIVSGNRLTS-LPVL 400 (788)
T ss_pred ccc-ccc---cccccceEecCCCccCC-CCCC---Ccccceehhhcccccc-Cccc---ccccceEEecCCcccC-CCCc
Confidence 874 443 22578999999999985 4432 3578888999998874 5543 3578999999999885 4432
Q ss_pred hhcccCCCEEEccCCcCCcccchhccCCCCCCEEEccCCcCccccccccccCCCCCEEECcCCcCcccCCC
Q 044615 286 IEKLIHLSELDLSHNIFREEIPSQICSMQSLEKLNLSHNNLSGSIPRCFEEMHWLSCIDISYNALQGLIPN 356 (571)
Q Consensus 286 ~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~~ 356 (571)
.++|+.|++++|.+++ +|.. ..+|+.|++++|+|+ .+|..+..++.|+.|+|++|++++..+.
T Consensus 401 ---~s~L~~LdLS~N~Lss-IP~l---~~~L~~L~Ls~NqLt-~LP~sl~~L~~L~~LdLs~N~Ls~~~~~ 463 (788)
T PRK15387 401 ---PSELKELMVSGNRLTS-LPML---PSGLLSLSVYRNQLT-RLPESLIHLSSETTVNLEGNPLSERTLQ 463 (788)
T ss_pred ---ccCCCEEEccCCcCCC-CCcc---hhhhhhhhhccCccc-ccChHHhhccCCCeEECCCCCCCchHHH
Confidence 3578999999999876 5543 346788999999998 6788899999999999999999887554
No 15
>KOG4237 consensus Extracellular matrix protein slit, contains leucine-rich and EGF-like repeats [Extracellular structures; Signal transduction mechanisms]
Probab=99.86 E-value=4.8e-24 Score=201.80 Aligned_cols=291 Identities=22% Similarity=0.246 Sum_probs=220.0
Q ss_pred EEccCCccc--cCCC-CccceeecccccccCCCCCCCccccccccCCCCCCEEecccCcCcccccccccCCCCCCEEEcc
Q 044615 53 TSISFDELH--EKLL-TFEATAHFSVLAFTGQDWPLYSSIPDEIGNMKSLSDLQLSENILNGSIPLALGNLTNLVVLDLS 129 (571)
Q Consensus 53 l~l~~n~l~--~~~l-~~l~~l~l~~n~l~~~~~~~~~~~p~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~ 129 (571)
.+-+.-++. -.++ +....++|..|.++. .-|..|+.+++|+.||||+|+|+.+.|++|.++.+|.+|-+.
T Consensus 51 VdCr~~GL~eVP~~LP~~tveirLdqN~I~~-------iP~~aF~~l~~LRrLdLS~N~Is~I~p~AF~GL~~l~~Lvly 123 (498)
T KOG4237|consen 51 VDCRGKGLTEVPANLPPETVEIRLDQNQISS-------IPPGAFKTLHRLRRLDLSKNNISFIAPDAFKGLASLLSLVLY 123 (498)
T ss_pred EEccCCCcccCcccCCCcceEEEeccCCccc-------CChhhccchhhhceecccccchhhcChHhhhhhHhhhHHHhh
Confidence 444444444 2233 467788999999986 334578999999999999999999999999999998888777
Q ss_pred c-CcCcccccccccCCCCCCeeecccCcCcccCCccccCCCCCCEEEccCCCCCccCChhhhhccCCCcEEEccCCccc-
Q 044615 130 T-NKLSGSIPLSFANLTSLSILYLYENSLCDSIPKEIGNMNSLSILDLSSNKLNGSIPLSLANLTNSLKVLYLSSNHIV- 207 (571)
Q Consensus 130 ~-n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~~L~~L~l~~n~~~- 207 (571)
+ |+|+....+.|++|..|+.|.+.-|++.-...+.|..|++|..|.+.+|.+....-..|..+.. ++.+.+..|.+-
T Consensus 124 g~NkI~~l~k~~F~gL~slqrLllNan~i~Cir~~al~dL~~l~lLslyDn~~q~i~~~tf~~l~~-i~tlhlA~np~ic 202 (498)
T KOG4237|consen 124 GNNKITDLPKGAFGGLSSLQRLLLNANHINCIRQDALRDLPSLSLLSLYDNKIQSICKGTFQGLAA-IKTLHLAQNPFIC 202 (498)
T ss_pred cCCchhhhhhhHhhhHHHHHHHhcChhhhcchhHHHHHHhhhcchhcccchhhhhhccccccchhc-cchHhhhcCcccc
Confidence 6 9999888888999999999999999998777788999999999999999988433336767665 888888888732
Q ss_pred -----------ccCCccccCCCCCcEEeCccCcCcCCCChhhhCCCCCCEE--Ecc-cCccccc-cchhhccCCCCCEEE
Q 044615 208 -----------GEIPLGHGMLSSLIQLTLNNNELSGQLSPELGSLIQLEYL--DLS-ANTFHKS-IPESLSNLVKLHYLN 272 (571)
Q Consensus 208 -----------~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L--~L~-~n~l~~~-~~~~l~~l~~L~~L~ 272 (571)
...|..+++.....-..+.++++..+.+..|... ++.+ .++ .+...+. +...|..+++|+.|+
T Consensus 203 dCnL~wla~~~a~~~ietsgarc~~p~rl~~~Ri~q~~a~kf~c~--~esl~s~~~~~d~~d~~cP~~cf~~L~~L~~ln 280 (498)
T KOG4237|consen 203 DCNLPWLADDLAMNPIETSGARCVSPYRLYYKRINQEDARKFLCS--LESLPSRLSSEDFPDSICPAKCFKKLPNLRKLN 280 (498)
T ss_pred ccccchhhhHHhhchhhcccceecchHHHHHHHhcccchhhhhhh--HHhHHHhhccccCcCCcChHHHHhhcccceEec
Confidence 1223344444444444455555554433333321 2222 112 2222222 234588999999999
Q ss_pred cCCccCccCcchhhhcccCCCEEEccCCcCCcccchhccCCCCCCEEEccCCcCccccccccccCCCCCEEECcCCcCcc
Q 044615 273 LSNNQFSQKIPNKIEKLIHLSELDLSHNIFREEIPSQICSMQSLEKLNLSHNNLSGSIPRCFEEMHWLSCIDISYNALQG 352 (571)
Q Consensus 273 Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~ls~N~l~~ 352 (571)
|++|+++++.+.+|.++..+++|+|..|++...-...|.++..|+.|+|.+|+|+...|..|..+..|..|+|-.|++.+
T Consensus 281 lsnN~i~~i~~~aFe~~a~l~eL~L~~N~l~~v~~~~f~~ls~L~tL~L~~N~it~~~~~aF~~~~~l~~l~l~~Np~~C 360 (498)
T KOG4237|consen 281 LSNNKITRIEDGAFEGAAELQELYLTRNKLEFVSSGMFQGLSGLKTLSLYDNQITTVAPGAFQTLFSLSTLNLLSNPFNC 360 (498)
T ss_pred cCCCccchhhhhhhcchhhhhhhhcCcchHHHHHHHhhhccccceeeeecCCeeEEEecccccccceeeeeehccCcccC
Confidence 99999998888999999999999999999987777788999999999999999999999999999999999999998865
Q ss_pred c
Q 044615 353 L 353 (571)
Q Consensus 353 ~ 353 (571)
-
T Consensus 361 n 361 (498)
T KOG4237|consen 361 N 361 (498)
T ss_pred c
Confidence 4
No 16
>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.86 E-value=2.9e-21 Score=193.35 Aligned_cols=119 Identities=38% Similarity=0.679 Sum_probs=106.4
Q ss_pred CccccHHHHHHHccCCCccCeeeccCcceEEEEEcCCCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhcCCCCcccEEE
Q 044615 449 DGKIVHEEIIRATNNFDDGHCIGNGGQGSVYKAKLPTGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKIRHRNIVKFYG 528 (571)
Q Consensus 449 ~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~ 528 (571)
...|++.++..+|++|...+.||+|+||.||+|...+|..||||++....... .++|.+|++++++++|||+|+++|
T Consensus 62 ~~~fs~~el~~AT~~Fs~~~~ig~Ggfg~VYkG~l~~~~~vAVK~~~~~~~~~---~~eF~~Ei~~ls~l~H~Nlv~LlG 138 (361)
T KOG1187|consen 62 LRSFSYDELRKATNNFSESNLIGEGGFGTVYKGVLSDGTVVAVKRLSSNSGQG---EREFLNEVEILSRLRHPNLVKLLG 138 (361)
T ss_pred cceeeHHHHHHHHhCCchhcceecCCCeEEEEEEECCCCEEEEEEecCCCCcc---hhHHHHHHHHHhcCCCcCcccEEE
Confidence 34688999999999999999999999999999999888999999887544321 355999999999999999999999
Q ss_pred EEEeCC-eeEEEEeccCCCChhhhhccCCCccCCCHHHHhhhcC
Q 044615 529 FCSHAL-HSFVVYEYLEMGSLAMNLSNDAAAEQFCWTKRMNAIK 571 (571)
Q Consensus 529 ~~~~~~-~~~lv~e~~~~G~L~~~l~~~~~~~~l~w~~r~~ia~ 571 (571)
||.+.+ +.++|||||++|+|.++|+.+... +|+|.+|++||+
T Consensus 139 yC~e~~~~~~LVYEym~nGsL~d~L~~~~~~-~L~W~~R~kIa~ 181 (361)
T KOG1187|consen 139 YCLEGGEHRLLVYEYMPNGSLEDHLHGKKGE-PLDWETRLKIAL 181 (361)
T ss_pred EEecCCceEEEEEEccCCCCHHHHhCCCCCC-CCCHHHHHHHHH
Confidence 999998 599999999999999999976554 899999999984
No 17
>PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional
Probab=99.85 E-value=9.5e-21 Score=203.12 Aligned_cols=255 Identities=25% Similarity=0.280 Sum_probs=201.4
Q ss_pred CCCCCchhhcCCCCCCEEEccCCccc--cCCCCccceeecccccccCCCCCCCccccccccCCCCCCEEecccCcCcccc
Q 044615 36 GLGDDYKELVRAVQARDTSISFDELH--EKLLTFEATAHFSVLAFTGQDWPLYSSIPDEIGNMKSLSDLQLSENILNGSI 113 (571)
Q Consensus 36 ~~~~~~~~l~~~~~l~~l~l~~n~l~--~~~l~~l~~l~l~~n~l~~~~~~~~~~~p~~~~~l~~L~~L~L~~n~i~~~~ 113 (571)
++..+|..+. .+++.|+++.|.++ ....++|+.|++++|+++. +|.. .++|+.|+|++|.++ .+
T Consensus 212 ~LtsLP~~l~--~~L~~L~L~~N~Lt~LP~lp~~Lk~LdLs~N~Lts--------LP~l---p~sL~~L~Ls~N~L~-~L 277 (788)
T PRK15387 212 GLTTLPDCLP--AHITTLVIPDNNLTSLPALPPELRTLEVSGNQLTS--------LPVL---PPGLLELSIFSNPLT-HL 277 (788)
T ss_pred CCCcCCcchh--cCCCEEEccCCcCCCCCCCCCCCcEEEecCCccCc--------ccCc---ccccceeeccCCchh-hh
Confidence 4445677665 37999999999988 3346799999999999985 4542 368999999999987 45
Q ss_pred cccccCCCCCCEEEcccCcCcccccccccCCCCCCeeecccCcCcccCCccccCCCCCCEEEccCCCCCccCChhhhhcc
Q 044615 114 PLALGNLTNLVVLDLSTNKLSGSIPLSFANLTSLSILYLYENSLCDSIPKEIGNMNSLSILDLSSNKLNGSIPLSLANLT 193 (571)
Q Consensus 114 ~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~ 193 (571)
|..+ ++|+.|++++|+++. +|. .+++|+.|+|++|.+.+ +|.. ..+|+.|++++|+++ .+|. ++
T Consensus 278 p~lp---~~L~~L~Ls~N~Lt~-LP~---~p~~L~~LdLS~N~L~~-Lp~l---p~~L~~L~Ls~N~L~-~LP~----lp 341 (788)
T PRK15387 278 PALP---SGLCKLWIFGNQLTS-LPV---LPPGLQELSVSDNQLAS-LPAL---PSELCKLWAYNNQLT-SLPT----LP 341 (788)
T ss_pred hhch---hhcCEEECcCCcccc-ccc---cccccceeECCCCcccc-CCCC---cccccccccccCccc-cccc----cc
Confidence 5433 578899999999984 454 35789999999999985 4543 246888999999998 4664 33
Q ss_pred CCCcEEEccCCcccccCCccccCCCCCcEEeCccCcCcCCCChhhhCCCCCCEEEcccCccccccchhhccCCCCCEEEc
Q 044615 194 NSLKVLYLSSNHIVGEIPLGHGMLSSLIQLTLNNNELSGQLSPELGSLIQLEYLDLSANTFHKSIPESLSNLVKLHYLNL 273 (571)
Q Consensus 194 ~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L 273 (571)
.+|+.|++++|+++. +|.. ..+|+.|++++|++.. +|.. ..+|+.|++++|.++. +|.. .++|+.|++
T Consensus 342 ~~Lq~LdLS~N~Ls~-LP~l---p~~L~~L~Ls~N~L~~-LP~l---~~~L~~LdLs~N~Lt~-LP~l---~s~L~~LdL 409 (788)
T PRK15387 342 SGLQELSVSDNQLAS-LPTL---PSELYKLWAYNNRLTS-LPAL---PSGLKELIVSGNRLTS-LPVL---PSELKELMV 409 (788)
T ss_pred cccceEecCCCccCC-CCCC---Ccccceehhhcccccc-Cccc---ccccceEEecCCcccC-CCCc---ccCCCEEEc
Confidence 459999999999985 4532 3578899999999985 5543 3679999999999985 4543 368999999
Q ss_pred CCccCccCcchhhhcccCCCEEEccCCcCCcccchhccCCCCCCEEEccCCcCccccccccccC
Q 044615 274 SNNQFSQKIPNKIEKLIHLSELDLSHNIFREEIPSQICSMQSLEKLNLSHNNLSGSIPRCFEEM 337 (571)
Q Consensus 274 s~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l 337 (571)
++|++++ +|.. ..+|+.|++++|+++ .+|..++.+++|+.|+|++|+|++..|..+..+
T Consensus 410 S~N~Lss-IP~l---~~~L~~L~Ls~NqLt-~LP~sl~~L~~L~~LdLs~N~Ls~~~~~~L~~l 468 (788)
T PRK15387 410 SGNRLTS-LPML---PSGLLSLSVYRNQLT-RLPESLIHLSSETTVNLEGNPLSERTLQALREI 468 (788)
T ss_pred cCCcCCC-CCcc---hhhhhhhhhccCccc-ccChHHhhccCCCeEECCCCCCCchHHHHHHHH
Confidence 9999985 5643 346889999999997 478899999999999999999999888877443
No 18
>PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional
Probab=99.82 E-value=7.2e-20 Score=197.63 Aligned_cols=245 Identities=28% Similarity=0.445 Sum_probs=126.8
Q ss_pred cceeecccccccCCCCCCCccccccccCCCCCCEEecccCcCcccccccccCCCCCCEEEcccCcCcccccccccCCCCC
Q 044615 68 EATAHFSVLAFTGQDWPLYSSIPDEIGNMKSLSDLQLSENILNGSIPLALGNLTNLVVLDLSTNKLSGSIPLSFANLTSL 147 (571)
Q Consensus 68 l~~l~l~~n~l~~~~~~~~~~~p~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L 147 (571)
...|+++.++++. +|..+. ++|+.|+|++|.++ .+|..+. ++|++|++++|+++ .+|..+. .+|
T Consensus 180 ~~~L~L~~~~Lts--------LP~~Ip--~~L~~L~Ls~N~Lt-sLP~~l~--~nL~~L~Ls~N~Lt-sLP~~l~--~~L 243 (754)
T PRK15370 180 KTELRLKILGLTT--------IPACIP--EQITTLILDNNELK-SLPENLQ--GNIKTLYANSNQLT-SIPATLP--DTI 243 (754)
T ss_pred ceEEEeCCCCcCc--------CCcccc--cCCcEEEecCCCCC-cCChhhc--cCCCEEECCCCccc-cCChhhh--ccc
Confidence 4455555555443 344332 35666666666665 3444332 35666666666665 3343332 356
Q ss_pred CeeecccCcCcccCCccccCCCCCCEEEccCCCCCccCChhhhhccCCCcEEEccCCcccccCCccccCCCCCcEEeCcc
Q 044615 148 SILYLYENSLCDSIPKEIGNMNSLSILDLSSNKLNGSIPLSLANLTNSLKVLYLSSNHIVGEIPLGHGMLSSLIQLTLNN 227 (571)
Q Consensus 148 ~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~ 227 (571)
+.|+|++|.+. .+|..+. .+|+.|++++|++. .+|..+. .+|+.|++++|.++. +|..+. ++|+.|++++
T Consensus 244 ~~L~Ls~N~L~-~LP~~l~--s~L~~L~Ls~N~L~-~LP~~l~---~sL~~L~Ls~N~Lt~-LP~~lp--~sL~~L~Ls~ 313 (754)
T PRK15370 244 QEMELSINRIT-ELPERLP--SALQSLDLFHNKIS-CLPENLP---EELRYLSVYDNSIRT-LPAHLP--SGITHLNVQS 313 (754)
T ss_pred cEEECcCCccC-cCChhHh--CCCCEEECcCCccC-ccccccC---CCCcEEECCCCcccc-Ccccch--hhHHHHHhcC
Confidence 66666666654 3444332 35666666666665 3454332 236666666666653 332221 3556666666
Q ss_pred CcCcCCCChhhhCCCCCCEEEcccCccccccchhhccCCCCCEEEcCCccCccCcchhhhcccCCCEEEccCCcCCcccc
Q 044615 228 NELSGQLSPELGSLIQLEYLDLSANTFHKSIPESLSNLVKLHYLNLSNNQFSQKIPNKIEKLIHLSELDLSHNIFREEIP 307 (571)
Q Consensus 228 n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~ 307 (571)
|.++. +|..+ .++|+.|++++|.++. +|..+. ++|+.|++++|+++ .+|..+ .+.|+.|+|++|.++. +|
T Consensus 314 N~Lt~-LP~~l--~~sL~~L~Ls~N~Lt~-LP~~l~--~sL~~L~Ls~N~L~-~LP~~l--p~~L~~LdLs~N~Lt~-LP 383 (754)
T PRK15370 314 NSLTA-LPETL--PPGLKTLEAGENALTS-LPASLP--PELQVLDVSKNQIT-VLPETL--PPTITTLDVSRNALTN-LP 383 (754)
T ss_pred Ccccc-CCccc--cccceeccccCCcccc-CChhhc--CcccEEECCCCCCC-cCChhh--cCCcCEEECCCCcCCC-CC
Confidence 66653 23222 2456666666666653 343332 45666666666665 244333 2456666666666654 33
Q ss_pred hhccCCCCCCEEEccCCcCcccccc----ccccCCCCCEEECcCCcCc
Q 044615 308 SQICSMQSLEKLNLSHNNLSGSIPR----CFEEMHWLSCIDISYNALQ 351 (571)
Q Consensus 308 ~~~~~l~~L~~L~Ls~n~l~~~~p~----~~~~l~~L~~L~ls~N~l~ 351 (571)
..+. .+|+.|++++|+++ .+|. ++..++.+..|++.+|+++
T Consensus 384 ~~l~--~sL~~LdLs~N~L~-~LP~sl~~~~~~~~~l~~L~L~~Npls 428 (754)
T PRK15370 384 ENLP--AALQIMQASRNNLV-RLPESLPHFRGEGPQPTRIIVEYNPFS 428 (754)
T ss_pred HhHH--HHHHHHhhccCCcc-cCchhHHHHhhcCCCccEEEeeCCCcc
Confidence 3332 24666666666665 2333 2233455666666666654
No 19
>cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Probab=99.81 E-value=9.4e-21 Score=189.90 Aligned_cols=274 Identities=23% Similarity=0.273 Sum_probs=154.2
Q ss_pred eeecccccccCCCCCCCccccccccCCCCCCEEecccCcCccc----ccccccCCCCCCEEEcccCcCcc------cccc
Q 044615 70 TAHFSVLAFTGQDWPLYSSIPDEIGNMKSLSDLQLSENILNGS----IPLALGNLTNLVVLDLSTNKLSG------SIPL 139 (571)
Q Consensus 70 ~l~l~~n~l~~~~~~~~~~~p~~~~~l~~L~~L~L~~n~i~~~----~~~~~~~l~~L~~L~L~~n~i~~------~~~~ 139 (571)
.|+|+.+.+++.+ .+..+..+.+|++|+++++.++.. ++..+...++|++|+++++.+.+ .++.
T Consensus 2 ~l~L~~~~l~~~~------~~~~~~~l~~L~~l~l~~~~l~~~~~~~i~~~l~~~~~l~~l~l~~~~~~~~~~~~~~~~~ 75 (319)
T cd00116 2 QLSLKGELLKTER------ATELLPKLLCLQVLRLEGNTLGEEAAKALASALRPQPSLKELCLSLNETGRIPRGLQSLLQ 75 (319)
T ss_pred ccccccCcccccc------hHHHHHHHhhccEEeecCCCCcHHHHHHHHHHHhhCCCceEEeccccccCCcchHHHHHHH
Confidence 3566666666422 234455666788888888877432 44455666778888888777652 2344
Q ss_pred cccCCCCCCeeecccCcCcccCCccccCCCC---CCEEEccCCCCCc----cCChhhhhccCCCcEEEccCCccccc---
Q 044615 140 SFANLTSLSILYLYENSLCDSIPKEIGNMNS---LSILDLSSNKLNG----SIPLSLANLTNSLKVLYLSSNHIVGE--- 209 (571)
Q Consensus 140 ~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~---L~~L~L~~n~l~~----~~p~~~~~l~~~L~~L~l~~n~~~~~--- 209 (571)
.+..+++|+.|++++|.+.+..+..+..+.+ |++|++++|++.+ .+...+..+.++|+.|++++|.+++.
T Consensus 76 ~l~~~~~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~ls~~~~~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~ 155 (319)
T cd00116 76 GLTKGCGLQELDLSDNALGPDGCGVLESLLRSSSLQELKLNNNGLGDRGLRLLAKGLKDLPPALEKLVLGRNRLEGASCE 155 (319)
T ss_pred HHHhcCceeEEEccCCCCChhHHHHHHHHhccCcccEEEeeCCccchHHHHHHHHHHHhCCCCceEEEcCCCcCCchHHH
Confidence 5666778888888888776545555544444 8888888877763 12223334412477777777776632
Q ss_pred -CCccccCCCCCcEEeCccCcCcCC----CChhhhCCCCCCEEEcccCccccc----cchhhccCCCCCEEEcCCccCcc
Q 044615 210 -IPLGHGMLSSLIQLTLNNNELSGQ----LSPELGSLIQLEYLDLSANTFHKS----IPESLSNLVKLHYLNLSNNQFSQ 280 (571)
Q Consensus 210 -~~~~~~~l~~L~~L~l~~n~l~~~----~~~~~~~l~~L~~L~L~~n~l~~~----~~~~l~~l~~L~~L~Ls~n~l~~ 280 (571)
++..+..+++|+.|++++|.+++. ++..+..+++|+.|++++|.+++. +...+..+++|+.|++++|.+++
T Consensus 156 ~~~~~~~~~~~L~~L~l~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~~~~~~~L~~L~ls~n~l~~ 235 (319)
T cd00116 156 ALAKALRANRDLKELNLANNGIGDAGIRALAEGLKANCNLEVLDLNNNGLTDEGASALAETLASLKSLEVLNLGDNNLTD 235 (319)
T ss_pred HHHHHHHhCCCcCEEECcCCCCchHHHHHHHHHHHhCCCCCEEeccCCccChHHHHHHHHHhcccCCCCEEecCCCcCch
Confidence 222344455666777776666532 122334455677777776666432 22334555666666666666654
Q ss_pred Ccchhhhc-----ccCCCEEEccCCcCCc----ccchhccCCCCCCEEEccCCcCccc----cccccccC-CCCCEEECc
Q 044615 281 KIPNKIEK-----LIHLSELDLSHNIFRE----EIPSQICSMQSLEKLNLSHNNLSGS----IPRCFEEM-HWLSCIDIS 346 (571)
Q Consensus 281 ~~~~~~~~-----l~~L~~L~Ls~n~l~~----~~~~~~~~l~~L~~L~Ls~n~l~~~----~p~~~~~l-~~L~~L~ls 346 (571)
.....+.. .+.|+.|++++|.++. .+...+..+++|+.+++++|.++.. ....+... +.|+.+++.
T Consensus 236 ~~~~~l~~~~~~~~~~L~~L~l~~n~i~~~~~~~l~~~~~~~~~L~~l~l~~N~l~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (319)
T cd00116 236 AGAAALASALLSPNISLLTLSLSCNDITDDGAKDLAEVLAEKESLLELDLRGNKFGEEGAQLLAESLLEPGNELESLWVK 315 (319)
T ss_pred HHHHHHHHHHhccCCCceEEEccCCCCCcHHHHHHHHHHhcCCCccEEECCCCCCcHHHHHHHHHHHhhcCCchhhcccC
Confidence 22222211 2466666666666542 1223344455666666666666533 22222222 455555555
Q ss_pred CCc
Q 044615 347 YNA 349 (571)
Q Consensus 347 ~N~ 349 (571)
.|+
T Consensus 316 ~~~ 318 (319)
T cd00116 316 DDS 318 (319)
T ss_pred CCC
Confidence 554
No 20
>PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional
Probab=99.81 E-value=1.2e-19 Score=196.06 Aligned_cols=245 Identities=21% Similarity=0.356 Sum_probs=192.4
Q ss_pred CCCCEEEccCCccc---cCCCCccceeecccccccCCCCCCCccccccccCCCCCCEEecccCcCcccccccccCCCCCC
Q 044615 48 VQARDTSISFDELH---EKLLTFEATAHFSVLAFTGQDWPLYSSIPDEIGNMKSLSDLQLSENILNGSIPLALGNLTNLV 124 (571)
Q Consensus 48 ~~l~~l~l~~n~l~---~~~l~~l~~l~l~~n~l~~~~~~~~~~~p~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~ 124 (571)
.+...|+++.++++ ..-.+.++.|+|++|+++. +|..+. ++|++|++++|.++ .+|..+. .+|+
T Consensus 178 ~~~~~L~L~~~~LtsLP~~Ip~~L~~L~Ls~N~Lts--------LP~~l~--~nL~~L~Ls~N~Lt-sLP~~l~--~~L~ 244 (754)
T PRK15370 178 NNKTELRLKILGLTTIPACIPEQITTLILDNNELKS--------LPENLQ--GNIKTLYANSNQLT-SIPATLP--DTIQ 244 (754)
T ss_pred cCceEEEeCCCCcCcCCcccccCCcEEEecCCCCCc--------CChhhc--cCCCEEECCCCccc-cCChhhh--cccc
Confidence 34678999888777 2233579999999999885 676554 58999999999998 5676554 4799
Q ss_pred EEEcccCcCcccccccccCCCCCCeeecccCcCcccCCccccCCCCCCEEEccCCCCCccCChhhhhccCCCcEEEccCC
Q 044615 125 VLDLSTNKLSGSIPLSFANLTSLSILYLYENSLCDSIPKEIGNMNSLSILDLSSNKLNGSIPLSLANLTNSLKVLYLSSN 204 (571)
Q Consensus 125 ~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~~L~~L~l~~n 204 (571)
.|+|++|.+. .+|..+. .+|+.|++++|.+. .+|..+. ++|+.|++++|+++ .+|..+. .+|+.|++++|
T Consensus 245 ~L~Ls~N~L~-~LP~~l~--s~L~~L~Ls~N~L~-~LP~~l~--~sL~~L~Ls~N~Lt-~LP~~lp---~sL~~L~Ls~N 314 (754)
T PRK15370 245 EMELSINRIT-ELPERLP--SALQSLDLFHNKIS-CLPENLP--EELRYLSVYDNSIR-TLPAHLP---SGITHLNVQSN 314 (754)
T ss_pred EEECcCCccC-cCChhHh--CCCCEEECcCCccC-ccccccC--CCCcEEECCCCccc-cCcccch---hhHHHHHhcCC
Confidence 9999999998 5676654 58999999999997 4676554 58999999999998 5665543 35999999999
Q ss_pred cccccCCccccCCCCCcEEeCccCcCcCCCChhhhCCCCCCEEEcccCccccccchhhccCCCCCEEEcCCccCccCcch
Q 044615 205 HIVGEIPLGHGMLSSLIQLTLNNNELSGQLSPELGSLIQLEYLDLSANTFHKSIPESLSNLVKLHYLNLSNNQFSQKIPN 284 (571)
Q Consensus 205 ~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~ 284 (571)
.++. +|..+ .++|+.|++++|.++. +|..+ .++|+.|++++|.++ .+|..+. ++|+.|++++|.++. +|.
T Consensus 315 ~Lt~-LP~~l--~~sL~~L~Ls~N~Lt~-LP~~l--~~sL~~L~Ls~N~L~-~LP~~lp--~~L~~LdLs~N~Lt~-LP~ 384 (754)
T PRK15370 315 SLTA-LPETL--PPGLKTLEAGENALTS-LPASL--PPELQVLDVSKNQIT-VLPETLP--PTITTLDVSRNALTN-LPE 384 (754)
T ss_pred cccc-CCccc--cccceeccccCCcccc-CChhh--cCcccEEECCCCCCC-cCChhhc--CCcCEEECCCCcCCC-CCH
Confidence 9985 45433 3689999999999986 56555 379999999999997 4666553 689999999999985 555
Q ss_pred hhhcccCCCEEEccCCcCCcccch----hccCCCCCCEEEccCCcCcc
Q 044615 285 KIEKLIHLSELDLSHNIFREEIPS----QICSMQSLEKLNLSHNNLSG 328 (571)
Q Consensus 285 ~~~~l~~L~~L~Ls~n~l~~~~~~----~~~~l~~L~~L~Ls~n~l~~ 328 (571)
.+. ..|+.|++++|++.. +|. ....++.+..|++.+|+++.
T Consensus 385 ~l~--~sL~~LdLs~N~L~~-LP~sl~~~~~~~~~l~~L~L~~Npls~ 429 (754)
T PRK15370 385 NLP--AALQIMQASRNNLVR-LPESLPHFRGEGPQPTRIIVEYNPFSE 429 (754)
T ss_pred hHH--HHHHHHhhccCCccc-CchhHHHHhhcCCCccEEEeeCCCccH
Confidence 553 369999999999975 444 34556889999999999973
No 21
>cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Probab=99.78 E-value=2.4e-20 Score=186.98 Aligned_cols=260 Identities=27% Similarity=0.287 Sum_probs=167.0
Q ss_pred CCCCccceeecccccccCCCCCCCccccccccCCCCCCEEecccCcCcc------cccccccCCCCCCEEEcccCcCccc
Q 044615 63 KLLTFEATAHFSVLAFTGQDWPLYSSIPDEIGNMKSLSDLQLSENILNG------SIPLALGNLTNLVVLDLSTNKLSGS 136 (571)
Q Consensus 63 ~~l~~l~~l~l~~n~l~~~~~~~~~~~p~~~~~l~~L~~L~L~~n~i~~------~~~~~~~~l~~L~~L~L~~n~i~~~ 136 (571)
..+..++.++++++.++... ...++..+...++|+.|+++++.+.+ .++..+..+++|+.|++++|.+...
T Consensus 20 ~~l~~L~~l~l~~~~l~~~~---~~~i~~~l~~~~~l~~l~l~~~~~~~~~~~~~~~~~~l~~~~~L~~L~l~~~~~~~~ 96 (319)
T cd00116 20 PKLLCLQVLRLEGNTLGEEA---AKALASALRPQPSLKELCLSLNETGRIPRGLQSLLQGLTKGCGLQELDLSDNALGPD 96 (319)
T ss_pred HHHhhccEEeecCCCCcHHH---HHHHHHHHhhCCCceEEeccccccCCcchHHHHHHHHHHhcCceeEEEccCCCCChh
Confidence 34455677777777665411 11345556666777777777776651 2334566677777777777777655
Q ss_pred ccccccCCCC---CCeeecccCcCcc----cCCccccCC-CCCCEEEccCCCCCccC----ChhhhhccCCCcEEEccCC
Q 044615 137 IPLSFANLTS---LSILYLYENSLCD----SIPKEIGNM-NSLSILDLSSNKLNGSI----PLSLANLTNSLKVLYLSSN 204 (571)
Q Consensus 137 ~~~~~~~l~~---L~~L~L~~n~l~~----~~~~~l~~l-~~L~~L~L~~n~l~~~~----p~~~~~l~~~L~~L~l~~n 204 (571)
.+..+..+.+ |++|++++|.+.+ .+...+..+ ++|+.|++++|.+++.. +..+..+.. |+.|++++|
T Consensus 97 ~~~~~~~l~~~~~L~~L~ls~~~~~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~-L~~L~l~~n 175 (319)
T cd00116 97 GCGVLESLLRSSSLQELKLNNNGLGDRGLRLLAKGLKDLPPALEKLVLGRNRLEGASCEALAKALRANRD-LKELNLANN 175 (319)
T ss_pred HHHHHHHHhccCcccEEEeeCCccchHHHHHHHHHHHhCCCCceEEEcCCCcCCchHHHHHHHHHHhCCC-cCEEECcCC
Confidence 5555554444 7788887777753 222344555 77788888888776322 223333333 888888888
Q ss_pred ccccc----CCccccCCCCCcEEeCccCcCcCCC----ChhhhCCCCCCEEEcccCccccccchhhc-----cCCCCCEE
Q 044615 205 HIVGE----IPLGHGMLSSLIQLTLNNNELSGQL----SPELGSLIQLEYLDLSANTFHKSIPESLS-----NLVKLHYL 271 (571)
Q Consensus 205 ~~~~~----~~~~~~~l~~L~~L~l~~n~l~~~~----~~~~~~l~~L~~L~L~~n~l~~~~~~~l~-----~l~~L~~L 271 (571)
.+++. ++..+...++|+.|++++|.+.+.. ...+..+++|+.|++++|.+++.....+. ..+.|+.|
T Consensus 176 ~l~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~~~~~~~L~~L~ls~n~l~~~~~~~l~~~~~~~~~~L~~L 255 (319)
T cd00116 176 GIGDAGIRALAEGLKANCNLEVLDLNNNGLTDEGASALAETLASLKSLEVLNLGDNNLTDAGAAALASALLSPNISLLTL 255 (319)
T ss_pred CCchHHHHHHHHHHHhCCCCCEEeccCCccChHHHHHHHHHhcccCCCCEEecCCCcCchHHHHHHHHHHhccCCCceEE
Confidence 77632 2233445568888888888776432 33456678899999999888753333322 23789999
Q ss_pred EcCCccCcc----CcchhhhcccCCCEEEccCCcCCcc----cchhccCC-CCCCEEEccCCcC
Q 044615 272 NLSNNQFSQ----KIPNKIEKLIHLSELDLSHNIFREE----IPSQICSM-QSLEKLNLSHNNL 326 (571)
Q Consensus 272 ~Ls~n~l~~----~~~~~~~~l~~L~~L~Ls~n~l~~~----~~~~~~~l-~~L~~L~Ls~n~l 326 (571)
++++|.++. .+...+..+++|+.+++++|.+... ....+... +.|+.+++.+|.+
T Consensus 256 ~l~~n~i~~~~~~~l~~~~~~~~~L~~l~l~~N~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (319)
T cd00116 256 SLSCNDITDDGAKDLAEVLAEKESLLELDLRGNKFGEEGAQLLAESLLEPGNELESLWVKDDSF 319 (319)
T ss_pred EccCCCCCcHHHHHHHHHHhcCCCccEEECCCCCCcHHHHHHHHHHHhhcCCchhhcccCCCCC
Confidence 999998862 2334556668899999999998754 44445555 7888898888764
No 22
>KOG0617 consensus Ras suppressor protein (contains leucine-rich repeats) [Signal transduction mechanisms]
Probab=99.77 E-value=7.5e-21 Score=160.27 Aligned_cols=161 Identities=35% Similarity=0.580 Sum_probs=127.9
Q ss_pred cccccccCCCCCCEEecccCcCcccccccccCCCCCCEEEcccCcCcccccccccCCCCCCeeecccCcCcccCCccccC
Q 044615 88 SIPDEIGNMKSLSDLQLSENILNGSIPLALGNLTNLVVLDLSTNKLSGSIPLSFANLTSLSILYLYENSLCDSIPKEIGN 167 (571)
Q Consensus 88 ~~p~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~ 167 (571)
.+|. +.++.+++.|.||+|.++ .+|..++.+.+|+.|++++|+|+ ..|.+++.++.|++|+++-|++. ..|..|+.
T Consensus 25 ~~~g-Lf~~s~ITrLtLSHNKl~-~vppnia~l~nlevln~~nnqie-~lp~~issl~klr~lnvgmnrl~-~lprgfgs 100 (264)
T KOG0617|consen 25 ELPG-LFNMSNITRLTLSHNKLT-VVPPNIAELKNLEVLNLSNNQIE-ELPTSISSLPKLRILNVGMNRLN-ILPRGFGS 100 (264)
T ss_pred hccc-ccchhhhhhhhcccCcee-ecCCcHHHhhhhhhhhcccchhh-hcChhhhhchhhhheecchhhhh-cCccccCC
Confidence 4443 456788899999999998 67788999999999999999997 67888999999999999999985 78999999
Q ss_pred CCCCCEEEccCCCCCc-cCChhhhhccCCCcEEEccCCcccccCCccccCCCCCcEEeCccCcCcCCCChhhhCCCCCCE
Q 044615 168 MNSLSILDLSSNKLNG-SIPLSLANLTNSLKVLYLSSNHIVGEIPLGHGMLSSLIQLTLNNNELSGQLSPELGSLIQLEY 246 (571)
Q Consensus 168 l~~L~~L~L~~n~l~~-~~p~~~~~l~~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~ 246 (571)
++.|+.|||.+|++.. .+|..|+-++. |+.|+++.|.+. .+|..++.+++|+.|.+..|.+- .+|..++.+++|+.
T Consensus 101 ~p~levldltynnl~e~~lpgnff~m~t-lralyl~dndfe-~lp~dvg~lt~lqil~lrdndll-~lpkeig~lt~lre 177 (264)
T KOG0617|consen 101 FPALEVLDLTYNNLNENSLPGNFFYMTT-LRALYLGDNDFE-ILPPDVGKLTNLQILSLRDNDLL-SLPKEIGDLTRLRE 177 (264)
T ss_pred CchhhhhhccccccccccCCcchhHHHH-HHHHHhcCCCcc-cCChhhhhhcceeEEeeccCchh-hCcHHHHHHHHHHH
Confidence 9999999999998864 57777887776 888888888876 56666677777777777666665 35666666666666
Q ss_pred EEcccCccc
Q 044615 247 LDLSANTFH 255 (571)
Q Consensus 247 L~L~~n~l~ 255 (571)
|.+.+|+++
T Consensus 178 lhiqgnrl~ 186 (264)
T KOG0617|consen 178 LHIQGNRLT 186 (264)
T ss_pred Hhcccceee
Confidence 666666665
No 23
>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=99.73 E-value=7.3e-18 Score=161.38 Aligned_cols=97 Identities=23% Similarity=0.372 Sum_probs=86.0
Q ss_pred HHccCCCccCeeeccCcceEEEEE-cCCCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhcCCCCcccEEEEEEeCCeeE
Q 044615 459 RATNNFDDGHCIGNGGQGSVYKAK-LPTGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKIRHRNIVKFYGFCSHALHSF 537 (571)
Q Consensus 459 ~~~~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~ 537 (571)
+..++|...+.||+|+||+||+|+ .+++..||||.+.+... ..+..+....||++|+.++|||||++++++++++.+|
T Consensus 7 ~~~~~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l-~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~~~~~i~ 85 (429)
T KOG0595|consen 7 RVVGDYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKL-NKKLVELLLSEIKILKELKHPNIVRLLDCIEDDDFIY 85 (429)
T ss_pred cccccceehhhccCcceEEEEEeEeccCCceEEeeeehhhcc-CHHHHHHHHHHHHHHHhcCCcceeeEEEEEecCCeEE
Confidence 345679999999999999999999 45789999999987643 2355677899999999999999999999999999999
Q ss_pred EEEeccCCCChhhhhccCC
Q 044615 538 VVYEYLEMGSLAMNLSNDA 556 (571)
Q Consensus 538 lv~e~~~~G~L~~~l~~~~ 556 (571)
+|||||.||||.+||+.++
T Consensus 86 lVMEyC~gGDLs~yi~~~~ 104 (429)
T KOG0595|consen 86 LVMEYCNGGDLSDYIRRRG 104 (429)
T ss_pred EEEEeCCCCCHHHHHHHcC
Confidence 9999999999999999764
No 24
>KOG0617 consensus Ras suppressor protein (contains leucine-rich repeats) [Signal transduction mechanisms]
Probab=99.72 E-value=8.8e-20 Score=153.83 Aligned_cols=163 Identities=30% Similarity=0.504 Sum_probs=140.5
Q ss_pred CCCccceeecccccccCCCCCCCccccccccCCCCCCEEecccCcCcccccccccCCCCCCEEEcccCcCcccccccccC
Q 044615 64 LLTFEATAHFSVLAFTGQDWPLYSSIPDEIGNMKSLSDLQLSENILNGSIPLALGNLTNLVVLDLSTNKLSGSIPLSFAN 143 (571)
Q Consensus 64 ~l~~l~~l~l~~n~l~~~~~~~~~~~p~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~ 143 (571)
.+...+.|.|++|+++ .+|..+..+.+|+.|++++|++. .+|.+++.+++|+.|++.-|++. ..|..|+.
T Consensus 31 ~~s~ITrLtLSHNKl~--------~vppnia~l~nlevln~~nnqie-~lp~~issl~klr~lnvgmnrl~-~lprgfgs 100 (264)
T KOG0617|consen 31 NMSNITRLTLSHNKLT--------VVPPNIAELKNLEVLNLSNNQIE-ELPTSISSLPKLRILNVGMNRLN-ILPRGFGS 100 (264)
T ss_pred chhhhhhhhcccCcee--------ecCCcHHHhhhhhhhhcccchhh-hcChhhhhchhhhheecchhhhh-cCccccCC
Confidence 4556677778888887 47888999999999999999997 78889999999999999999986 78899999
Q ss_pred CCCCCeeecccCcCcc-cCCccccCCCCCCEEEccCCCCCccCChhhhhccCCCcEEEccCCcccccCCccccCCCCCcE
Q 044615 144 LTSLSILYLYENSLCD-SIPKEIGNMNSLSILDLSSNKLNGSIPLSLANLTNSLKVLYLSSNHIVGEIPLGHGMLSSLIQ 222 (571)
Q Consensus 144 l~~L~~L~L~~n~l~~-~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~~L~~L~l~~n~~~~~~~~~~~~l~~L~~ 222 (571)
+|.|+.|||.+|++.. .+|..|..++.|+.|+|++|.+. .+|..++++++ |+.|.+..|.+- .+|..++.++.|++
T Consensus 101 ~p~levldltynnl~e~~lpgnff~m~tlralyl~dndfe-~lp~dvg~lt~-lqil~lrdndll-~lpkeig~lt~lre 177 (264)
T KOG0617|consen 101 FPALEVLDLTYNNLNENSLPGNFFYMTTLRALYLGDNDFE-ILPPDVGKLTN-LQILSLRDNDLL-SLPKEIGDLTRLRE 177 (264)
T ss_pred CchhhhhhccccccccccCCcchhHHHHHHHHHhcCCCcc-cCChhhhhhcc-eeEEeeccCchh-hCcHHHHHHHHHHH
Confidence 9999999999988874 57888888999999999999997 88999999987 999999999886 67888999999999
Q ss_pred EeCccCcCcCCCChhhhC
Q 044615 223 LTLNNNELSGQLSPELGS 240 (571)
Q Consensus 223 L~l~~n~l~~~~~~~~~~ 240 (571)
|++.+|+++ .+|+.++.
T Consensus 178 lhiqgnrl~-vlppel~~ 194 (264)
T KOG0617|consen 178 LHIQGNRLT-VLPPELAN 194 (264)
T ss_pred Hhcccceee-ecChhhhh
Confidence 999999998 46666654
No 25
>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]
Probab=99.63 E-value=5.5e-16 Score=148.46 Aligned_cols=95 Identities=26% Similarity=0.365 Sum_probs=81.7
Q ss_pred ccCCCccCeeeccCcceEEEEE-cCCCCEEEEEEccCCCCCchH----hHHHHHHHHHHHhhcCCCCcccEEEEEEeCCe
Q 044615 461 TNNFDDGHCIGNGGQGSVYKAK-LPTGEIVDVKKFHSPLPDEMA----CQQEFLNEVNALTKIRHRNIVKFYGFCSHALH 535 (571)
Q Consensus 461 ~~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~----~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~ 535 (571)
.+.|.+.+.+|+|+||.|..|. .++|+.||||++.+....... ....+.+|+++|++++|||||+++++|..++.
T Consensus 171 ~d~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~f~~~ds 250 (475)
T KOG0615|consen 171 NDYYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDFFEVPDS 250 (475)
T ss_pred cceeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeeeeecCCc
Confidence 3457889999999999999998 679999999999875543311 22346799999999999999999999999999
Q ss_pred eEEEEeccCCCChhhhhccC
Q 044615 536 SFVVYEYLEMGSLAMNLSND 555 (571)
Q Consensus 536 ~~lv~e~~~~G~L~~~l~~~ 555 (571)
.|||||||+||+|++++-..
T Consensus 251 ~YmVlE~v~GGeLfd~vv~n 270 (475)
T KOG0615|consen 251 SYMVLEYVEGGELFDKVVAN 270 (475)
T ss_pred eEEEEEEecCccHHHHHHhc
Confidence 99999999999999999754
No 26
>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]
Probab=99.62 E-value=1.2e-15 Score=151.96 Aligned_cols=104 Identities=31% Similarity=0.513 Sum_probs=88.4
Q ss_pred ccCeeeccCcceEEEEEcCCCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhcCCCCcccEEEEEEeCC-eeEEEEeccC
Q 044615 466 DGHCIGNGGQGSVYKAKLPTGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKIRHRNIVKFYGFCSHAL-HSFVVYEYLE 544 (571)
Q Consensus 466 ~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~-~~~lv~e~~~ 544 (571)
..+.+|+|+||+||+|.+.....||||++......... .+.|.+|+.+|.+++|||||+++|+|.++. ..++|||||+
T Consensus 45 ~~~~iG~G~~g~V~~~~~~g~~~vavK~~~~~~~~~~~-~~~f~~E~~il~~l~HpNIV~f~G~~~~~~~~~~iVtEy~~ 123 (362)
T KOG0192|consen 45 IEEVLGSGSFGTVYKGKWRGTDVVAVKIISDPDFDDES-RKAFRREASLLSRLRHPNIVQFYGACTSPPGSLCIVTEYMP 123 (362)
T ss_pred hhhhcccCCceeEEEEEeCCceeEEEEEecchhcChHH-HHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCceEEEEEeCC
Confidence 34559999999999999865445999999866544433 678999999999999999999999999887 7899999999
Q ss_pred CCChhhhhccCCCccCCCHHHHhhhcC
Q 044615 545 MGSLAMNLSNDAAAEQFCWTKRMNAIK 571 (571)
Q Consensus 545 ~G~L~~~l~~~~~~~~l~w~~r~~ia~ 571 (571)
+|+|.++++.. ....++|..+++||.
T Consensus 124 ~GsL~~~l~~~-~~~~l~~~~~l~~al 149 (362)
T KOG0192|consen 124 GGSLSVLLHKK-RKRKLPLKVRLRIAL 149 (362)
T ss_pred CCcHHHHHhhc-ccCCCCHHHHHHHHH
Confidence 99999999864 334799999999873
No 27
>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=99.59 E-value=3.1e-15 Score=151.15 Aligned_cols=113 Identities=24% Similarity=0.368 Sum_probs=90.9
Q ss_pred HHHHHccCCCccCeeeccCcceEEEEEcC--CC--CE-EEEEEccCCCCCchHhHHHHHHHHHHHhhcCCCCcccEEEEE
Q 044615 456 EIIRATNNFDDGHCIGNGGQGSVYKAKLP--TG--EI-VDVKKFHSPLPDEMACQQEFLNEVNALTKIRHRNIVKFYGFC 530 (571)
Q Consensus 456 ~~~~~~~~~~~~~~lg~G~~g~V~~~~~~--~~--~~-vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~ 530 (571)
.+.-..++-...+.||+|+||.||+|.++ ++ .. ||||..............+|++|+++|+.++|||||+++|++
T Consensus 151 ~Wel~H~~v~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~NVVr~yGVa 230 (474)
T KOG0194|consen 151 KWELSHSDIELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNHPNVVRFYGVA 230 (474)
T ss_pred ccEEeccCccccceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCCCCEEEEEEEE
Confidence 33334445556689999999999999843 22 23 899998754433345578899999999999999999999999
Q ss_pred EeCCeeEEEEeccCCCChhhhhccCCCccCCCHHHHhhhc
Q 044615 531 SHALHSFVVYEYLEMGSLAMNLSNDAAAEQFCWTKRMNAI 570 (571)
Q Consensus 531 ~~~~~~~lv~e~~~~G~L~~~l~~~~~~~~l~w~~r~~ia 570 (571)
.....+|+|||+|.||+|.++|+..+. .+++.++++.+
T Consensus 231 ~~~~Pl~ivmEl~~gGsL~~~L~k~~~--~v~~~ek~~~~ 268 (474)
T KOG0194|consen 231 VLEEPLMLVMELCNGGSLDDYLKKNKK--SLPTLEKLRFC 268 (474)
T ss_pred cCCCccEEEEEecCCCcHHHHHHhCCC--CCCHHHHHHHH
Confidence 999999999999999999999986544 57888887754
No 28
>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=99.57 E-value=6.7e-15 Score=153.88 Aligned_cols=107 Identities=23% Similarity=0.405 Sum_probs=87.0
Q ss_pred cCCCccCeeeccCcceEEEEEcC------CCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhcCCCCcccEEEEEEeCCe
Q 044615 462 NNFDDGHCIGNGGQGSVYKAKLP------TGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKIRHRNIVKFYGFCSHALH 535 (571)
Q Consensus 462 ~~~~~~~~lg~G~~g~V~~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~ 535 (571)
.+.+..+.||+|+||+||+|+.. +...||||.++... +.+.+++|.||+++++.++|||||+++|.|..++.
T Consensus 486 ~~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a--~~~~~~dF~REaeLla~l~H~nIVrLlGVC~~~~P 563 (774)
T KOG1026|consen 486 SDIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKA--ENQARQDFRREAELLAELQHPNIVRLLGVCREGDP 563 (774)
T ss_pred hheeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccc--cHHHHHHHHHHHHHHHhccCCCeEEEEEEEccCCe
Confidence 44556688999999999999832 34679999998543 33467899999999999999999999999999999
Q ss_pred eEEEEeccCCCChhhhhccCCC-----------ccCCCHHHHhhhc
Q 044615 536 SFVVYEYLEMGSLAMNLSNDAA-----------AEQFCWTKRMNAI 570 (571)
Q Consensus 536 ~~lv~e~~~~G~L~~~l~~~~~-----------~~~l~w~~r~~ia 570 (571)
.|+|+|||..|||.++|+-..+ ..+|+-.+-+.||
T Consensus 564 ~~MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA 609 (774)
T KOG1026|consen 564 LCMVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIA 609 (774)
T ss_pred eEEEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHH
Confidence 9999999999999999985322 1236666666655
No 29
>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.56 E-value=7.4e-15 Score=147.85 Aligned_cols=94 Identities=32% Similarity=0.548 Sum_probs=87.1
Q ss_pred cCCCccCeeeccCcceEEEEE-cCCCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhcCCCCcccEEEEEEeCCeeEEEE
Q 044615 462 NNFDDGHCIGNGGQGSVYKAK-LPTGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKIRHRNIVKFYGFCSHALHSFVVY 540 (571)
Q Consensus 462 ~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~ 540 (571)
..|..++.||+|||+.||.++ ..+|+.||+|++.+.........+...+||++.++++|||||+++++|++.+.+|||.
T Consensus 18 ~~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~FEDs~nVYivL 97 (592)
T KOG0575|consen 18 KRYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYHFFEDSNNVYIVL 97 (592)
T ss_pred ceeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeeeEeecCCceEEEE
Confidence 459999999999999999999 5899999999999877666677888999999999999999999999999999999999
Q ss_pred eccCCCChhhhhccC
Q 044615 541 EYLEMGSLAMNLSND 555 (571)
Q Consensus 541 e~~~~G~L~~~l~~~ 555 (571)
|+|++|+|..+++++
T Consensus 98 ELC~~~sL~el~Krr 112 (592)
T KOG0575|consen 98 ELCHRGSLMELLKRR 112 (592)
T ss_pred EecCCccHHHHHHhc
Confidence 999999999999844
No 30
>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]
Probab=99.56 E-value=1.7e-15 Score=144.38 Aligned_cols=95 Identities=19% Similarity=0.295 Sum_probs=88.0
Q ss_pred cCCCccCeeeccCcceEEEEE-cCCCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhcCCCCcccEEEEEEeCCeeEEEE
Q 044615 462 NNFDDGHCIGNGGQGSVYKAK-LPTGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKIRHRNIVKFYGFCSHALHSFVVY 540 (571)
Q Consensus 462 ~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~ 540 (571)
..|++.+.+|+|.||+|-+|. ...|+.||||.|+++...+.++.-.+.+||+||+.++||||++++++|+..+...|||
T Consensus 53 HRyE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEVFENkdKIvivM 132 (668)
T KOG0611|consen 53 HRYEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEVFENKDKIVIVM 132 (668)
T ss_pred hHHHHHHHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhhhcCCceEEEEE
Confidence 358888999999999999998 6799999999999988887777788999999999999999999999999999999999
Q ss_pred eccCCCChhhhhccCC
Q 044615 541 EYLEMGSLAMNLSNDA 556 (571)
Q Consensus 541 e~~~~G~L~~~l~~~~ 556 (571)
||..+|+|+||+.+++
T Consensus 133 EYaS~GeLYDYiSer~ 148 (668)
T KOG0611|consen 133 EYASGGELYDYISERG 148 (668)
T ss_pred EecCCccHHHHHHHhc
Confidence 9999999999998654
No 31
>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]
Probab=99.54 E-value=5.9e-15 Score=151.65 Aligned_cols=102 Identities=24% Similarity=0.397 Sum_probs=86.2
Q ss_pred CCccCeeeccCcceEEEEEcC----CCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhcCCCCcccEEEEEEeCCeeEEE
Q 044615 464 FDDGHCIGNGGQGSVYKAKLP----TGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKIRHRNIVKFYGFCSHALHSFVV 539 (571)
Q Consensus 464 ~~~~~~lg~G~~g~V~~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv 539 (571)
..+.++||.|.||+||+|+++ ....||||.++.... .+.+.+|..|+.||.+++||||+++-|+.......+||
T Consensus 631 i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~Gyt--ekqrrdFL~EAsIMGQFdHPNIIrLEGVVTks~PvMIi 708 (996)
T KOG0196|consen 631 VKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGYT--EKQRRDFLSEASIMGQFDHPNIIRLEGVVTKSKPVMII 708 (996)
T ss_pred eEEEEEEecccccceecccccCCCCcceeEEEeeeccCcc--HHHHhhhhhhhhhcccCCCCcEEEEEEEEecCceeEEE
Confidence 345789999999999999954 345799999986543 35578899999999999999999999999999999999
Q ss_pred EeccCCCChhhhhccCCCccCCCHHHHhhh
Q 044615 540 YEYLEMGSLAMNLSNDAAAEQFCWTKRMNA 569 (571)
Q Consensus 540 ~e~~~~G~L~~~l~~~~~~~~l~w~~r~~i 569 (571)
.|||+||+|..+|+..++ +++|.+.+.+
T Consensus 709 TEyMENGsLDsFLR~~DG--qftviQLVgM 736 (996)
T KOG0196|consen 709 TEYMENGSLDSFLRQNDG--QFTVIQLVGM 736 (996)
T ss_pred hhhhhCCcHHHHHhhcCC--ceEeehHHHH
Confidence 999999999999997765 4777665543
No 32
>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]
Probab=99.54 E-value=1.1e-14 Score=144.85 Aligned_cols=100 Identities=26% Similarity=0.414 Sum_probs=83.3
Q ss_pred CccCeeeccCcceEEEEEcCCCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhcCCCCcccEEEEEEeCCeeEEEEeccC
Q 044615 465 DDGHCIGNGGQGSVYKAKLPTGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKIRHRNIVKFYGFCSHALHSFVVYEYLE 544 (571)
Q Consensus 465 ~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~ 544 (571)
...+.||+|.||+||.|.+.....||+|.+...... .+.|.+|+++|++++|+|||+++|+|..++.+|||||||+
T Consensus 209 ~l~~~LG~G~FG~V~~g~~~~~~~vavk~ik~~~m~----~~~f~~Ea~iMk~L~H~~lV~l~gV~~~~~piyIVtE~m~ 284 (468)
T KOG0197|consen 209 KLIRELGSGQFGEVWLGKWNGSTKVAVKTIKEGSMS----PEAFLREAQIMKKLRHEKLVKLYGVCTKQEPIYIVTEYMP 284 (468)
T ss_pred HHHHHhcCCccceEEEEEEcCCCcccceEEeccccC----hhHHHHHHHHHHhCcccCeEEEEEEEecCCceEEEEEecc
Confidence 445779999999999999977779999999765322 4789999999999999999999999999889999999999
Q ss_pred CCChhhhhccCCCccCCCHHHHhhh
Q 044615 545 MGSLAMNLSNDAAAEQFCWTKRMNA 569 (571)
Q Consensus 545 ~G~L~~~l~~~~~~~~l~w~~r~~i 569 (571)
.|+|.++|+.+++ ..+.-.+.+.+
T Consensus 285 ~GsLl~yLr~~~~-~~l~~~~Ll~~ 308 (468)
T KOG0197|consen 285 KGSLLDYLRTREG-GLLNLPQLLDF 308 (468)
T ss_pred cCcHHHHhhhcCC-CccchHHHHHH
Confidence 9999999986322 34555544444
No 33
>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]
Probab=99.53 E-value=1.1e-14 Score=138.57 Aligned_cols=96 Identities=27% Similarity=0.368 Sum_probs=87.3
Q ss_pred ccCCCccCeeeccCcceEEEEE-cCCCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhcCCCCcccEEEEEEeCCeeEEE
Q 044615 461 TNNFDDGHCIGNGGQGSVYKAK-LPTGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKIRHRNIVKFYGFCSHALHSFVV 539 (571)
Q Consensus 461 ~~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv 539 (571)
.++|++.++||+|+||+||.++ ..+++.+|+|++++...-..+..+...+|..++.+++||.||+++..|++.+.+|+|
T Consensus 24 ~~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ysFQt~~kLylV 103 (357)
T KOG0598|consen 24 PDDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKLIYSFQTEEKLYLV 103 (357)
T ss_pred hhheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeEEecccCCeEEEE
Confidence 4679999999999999999999 568999999999987666556678899999999999999999999999999999999
Q ss_pred EeccCCCChhhhhccCC
Q 044615 540 YEYLEMGSLAMNLSNDA 556 (571)
Q Consensus 540 ~e~~~~G~L~~~l~~~~ 556 (571)
+||+.||+|+.+|++++
T Consensus 104 ld~~~GGeLf~hL~~eg 120 (357)
T KOG0598|consen 104 LDYLNGGELFYHLQREG 120 (357)
T ss_pred EeccCCccHHHHHHhcC
Confidence 99999999999998543
No 34
>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]
Probab=99.53 E-value=1.8e-14 Score=142.87 Aligned_cols=105 Identities=22% Similarity=0.280 Sum_probs=92.4
Q ss_pred HccCCCccCeeeccCcceEEEEE-cCCCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhcCCCCcccEEEEEEeCCeeEE
Q 044615 460 ATNNFDDGHCIGNGGQGSVYKAK-LPTGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKIRHRNIVKFYGFCSHALHSFV 538 (571)
Q Consensus 460 ~~~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~l 538 (571)
..++|+....||+|+||.||.|+ ..+|..+|+|++++.........+.+..|-.+|...++|+||+++..|++.+.+||
T Consensus 139 ~~~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYsFQD~~~LYL 218 (550)
T KOG0605|consen 139 SLDDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKLYYSFQDKEYLYL 218 (550)
T ss_pred CcccchhheeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEEEEecCCCeeEE
Confidence 45789999999999999999999 56899999999998776666667889999999999999999999999999999999
Q ss_pred EEeccCCCChhhhhccCCCccCCCHHH
Q 044615 539 VYEYLEMGSLAMNLSNDAAAEQFCWTK 565 (571)
Q Consensus 539 v~e~~~~G~L~~~l~~~~~~~~l~w~~ 565 (571)
||||+||||+..+|...+. ..-+|++
T Consensus 219 iMEylPGGD~mTLL~~~~~-L~e~~ar 244 (550)
T KOG0605|consen 219 IMEYLPGGDMMTLLMRKDT-LTEDWAR 244 (550)
T ss_pred EEEecCCccHHHHHHhcCc-CchHHHH
Confidence 9999999999999986543 3456654
No 35
>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.50 E-value=9.2e-15 Score=130.50 Aligned_cols=95 Identities=24% Similarity=0.464 Sum_probs=85.0
Q ss_pred HccCCCccCeeeccCcceEEEEE-cCCCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhcCCCCcccEEEEEEeCCeeEE
Q 044615 460 ATNNFDDGHCIGNGGQGSVYKAK-LPTGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKIRHRNIVKFYGFCSHALHSFV 538 (571)
Q Consensus 460 ~~~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~l 538 (571)
+.++|++++.+|+|.||.||.|+ .+++-.||+|++.+......+..+++.+||+|-+.++||||.+++++|.+....|+
T Consensus 20 ~l~dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpnilrlY~~fhd~~riyL 99 (281)
T KOG0580|consen 20 TLDDFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNILRLYGYFHDSKRIYL 99 (281)
T ss_pred chhhccccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCCccHHhhhhheeccceeEE
Confidence 34679999999999999999999 56788999999977654444556789999999999999999999999999999999
Q ss_pred EEeccCCCChhhhhcc
Q 044615 539 VYEYLEMGSLAMNLSN 554 (571)
Q Consensus 539 v~e~~~~G~L~~~l~~ 554 (571)
++||.++|+++..|++
T Consensus 100 ilEya~~gel~k~L~~ 115 (281)
T KOG0580|consen 100 ILEYAPRGELYKDLQE 115 (281)
T ss_pred EEEecCCchHHHHHHh
Confidence 9999999999999984
No 36
>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.48 E-value=2.1e-15 Score=137.53 Aligned_cols=92 Identities=26% Similarity=0.433 Sum_probs=79.7
Q ss_pred cCCCccCeeeccCcceEEEEE-cCCCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhcCCCCcccEEE-EEEeCCe-eEE
Q 044615 462 NNFDDGHCIGNGGQGSVYKAK-LPTGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKIRHRNIVKFYG-FCSHALH-SFV 538 (571)
Q Consensus 462 ~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~-~~~~~~~-~~l 538 (571)
.+|++.++||+|+||.||++. ..+|..+|.|.++-. ..+.+..+.+..||.+|++++|||||++++ .+.+..+ ++|
T Consensus 19 ~~y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~-~md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~~~~evlni 97 (375)
T KOG0591|consen 19 ADYQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFG-MMDAKARQDCVKEISLLKQLNHPNIVQYYAHSFIEDNEVLNI 97 (375)
T ss_pred HHHHHHHHHcCCcchheEEeeeccCcchhhhhhcchh-hccHHHHHHHHHHHHHHHhcCCchHHHHHHHhhhccchhhHH
Confidence 358888999999999999999 779999999999843 344567888999999999999999999998 5555554 899
Q ss_pred EEeccCCCChhhhhcc
Q 044615 539 VYEYLEMGSLAMNLSN 554 (571)
Q Consensus 539 v~e~~~~G~L~~~l~~ 554 (571)
|||||..|||...|+.
T Consensus 98 vmE~c~~GDLsqmIk~ 113 (375)
T KOG0591|consen 98 VMELCDAGDLSQMIKH 113 (375)
T ss_pred HHHhhcccCHHHHHHH
Confidence 9999999999999974
No 37
>PLN03150 hypothetical protein; Provisional
Probab=99.47 E-value=2.2e-13 Score=147.01 Aligned_cols=117 Identities=34% Similarity=0.554 Sum_probs=102.2
Q ss_pred CCEEEcCCccCccCcchhhhcccCCCEEEccCCcCCcccchhccCCCCCCEEEccCCcCccccccccccCCCCCEEECcC
Q 044615 268 LHYLNLSNNQFSQKIPNKIEKLIHLSELDLSHNIFREEIPSQICSMQSLEKLNLSHNNLSGSIPRCFEEMHWLSCIDISY 347 (571)
Q Consensus 268 L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~ls~ 347 (571)
++.|+|++|.+.+.+|..+..+++|+.|+|++|.+.+.+|..++.+++|+.|+|++|++++.+|+.+..+++|+.|+|++
T Consensus 420 v~~L~L~~n~L~g~ip~~i~~L~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~LdLs~N~lsg~iP~~l~~L~~L~~L~Ls~ 499 (623)
T PLN03150 420 IDGLGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLNG 499 (623)
T ss_pred EEEEECCCCCccccCCHHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECCCCCCCCCCchHHhcCCCCCEEECcC
Confidence 77899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcCcccCCCCC--ccCCCCcccccCCcCCCCCCCCCCCCC
Q 044615 348 NALQGLIPNST--AFRDAPMLALQGNKRLCGDIKRLPPCK 385 (571)
Q Consensus 348 N~l~~~~~~~~--~~~~~~~l~l~~n~~~c~~~~~~~~~~ 385 (571)
|+++|.+|... .......+.+.+|+..|+. +.++.|.
T Consensus 500 N~l~g~iP~~l~~~~~~~~~l~~~~N~~lc~~-p~l~~C~ 538 (623)
T PLN03150 500 NSLSGRVPAALGGRLLHRASFNFTDNAGLCGI-PGLRACG 538 (623)
T ss_pred CcccccCChHHhhccccCceEEecCCccccCC-CCCCCCc
Confidence 99999988632 1234456788999999974 3456774
No 38
>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]
Probab=99.45 E-value=6.5e-14 Score=139.64 Aligned_cols=93 Identities=27% Similarity=0.425 Sum_probs=82.7
Q ss_pred cCCCccCeeeccCcceEEEEEcCCCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhcCCCCcccEEEEEEeCCeeEEEEe
Q 044615 462 NNFDDGHCIGNGGQGSVYKAKLPTGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKIRHRNIVKFYGFCSHALHSFVVYE 541 (571)
Q Consensus 462 ~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~e 541 (571)
....+.++||+|.||+|..+....+..||||.++..... ..+.+|.+||++|.+++|||||+++|+|..++.+++|+|
T Consensus 538 s~L~~~ekiGeGqFGEVhLCeveg~lkVAVK~Lr~~a~~--~~r~~F~kEIkiLsqLkhPNIveLvGVC~~DePicmI~E 615 (807)
T KOG1094|consen 538 SRLRFKEKIGEGQFGEVHLCEVEGPLKVAVKILRPDATK--NARNDFLKEIKILSRLKHPNIVELLGVCVQDDPLCMITE 615 (807)
T ss_pred hheehhhhhcCcccceeEEEEecCceEEEEeecCcccch--hHHHHHHHHHHHHhccCCCCeeEEEeeeecCCchHHHHH
Confidence 445677899999999999999877899999999875433 336889999999999999999999999999999999999
Q ss_pred ccCCCChhhhhccCC
Q 044615 542 YLEMGSLAMNLSNDA 556 (571)
Q Consensus 542 ~~~~G~L~~~l~~~~ 556 (571)
||++|||.+++..+.
T Consensus 616 YmEnGDLnqFl~ahe 630 (807)
T KOG1094|consen 616 YMENGDLNQFLSAHE 630 (807)
T ss_pred HHhcCcHHHHHHhcc
Confidence 999999999998653
No 39
>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]
Probab=99.42 E-value=1.2e-13 Score=137.24 Aligned_cols=93 Identities=28% Similarity=0.360 Sum_probs=82.7
Q ss_pred cCCCccCeeeccCcceEEEEEc-CCCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhcCCCCcccEEEEEEeCCeeEEEE
Q 044615 462 NNFDDGHCIGNGGQGSVYKAKL-PTGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKIRHRNIVKFYGFCSHALHSFVVY 540 (571)
Q Consensus 462 ~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~ 540 (571)
++|.+.+.||+|+||.||||+. .+.+.||+|.+.+....+ +..+...+|++++++++|||||.++++|++..++|+|.
T Consensus 2 e~yhv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~~-k~l~~l~~ev~i~r~lkHpniv~m~esfEt~~~~~vVt 80 (808)
T KOG0597|consen 2 EQYHVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGRNE-KELKNLRQEVRILRSLKHPNIVEMLESFETSAHLWVVT 80 (808)
T ss_pred cchhHHHHhcCCccceeeecccccceeEEEEEEehhcCCch-HHHHHHHHHHHHHHhcCCcchhhHHHhhcccceEEEEe
Confidence 4677888899999999999994 478999999998776543 56778999999999999999999999999999999999
Q ss_pred eccCCCChhhhhccCC
Q 044615 541 EYLEMGSLAMNLSNDA 556 (571)
Q Consensus 541 e~~~~G~L~~~l~~~~ 556 (571)
|||.| +|+.+|.+++
T Consensus 81 e~a~g-~L~~il~~d~ 95 (808)
T KOG0597|consen 81 EYAVG-DLFTILEQDG 95 (808)
T ss_pred hhhhh-hHHHHHHhcc
Confidence 99987 9999998654
No 40
>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]
Probab=99.41 E-value=5.7e-13 Score=126.91 Aligned_cols=90 Identities=30% Similarity=0.417 Sum_probs=78.3
Q ss_pred CCccCeeeccCcceEEEEEc-CCCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhcCCCCcccEEEEEEeCC-eeEEEEe
Q 044615 464 FDDGHCIGNGGQGSVYKAKL-PTGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKIRHRNIVKFYGFCSHAL-HSFVVYE 541 (571)
Q Consensus 464 ~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~-~~~lv~e 541 (571)
.+..+.||+|..|+||++++ ++++.+|+|.+... .+...++++.+|++++.+++||+||.+||+|.... ..+|+||
T Consensus 81 le~~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~--~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~~~~~~isI~mE 158 (364)
T KOG0581|consen 81 LERLGVLGSGNGGTVYKVRHKPTGKIYALKVILLN--IDPALQKQILRELEILRSCQSPYIVGFYGAFYSNGEEISICME 158 (364)
T ss_pred hhhhhhcccCCCcEEEEEEEcCCCeEEEEEeeccc--CCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEEeCCceEEeehh
Confidence 44567899999999999994 58999999999543 23355788999999999999999999999999998 5999999
Q ss_pred ccCCCChhhhhccC
Q 044615 542 YLEMGSLAMNLSND 555 (571)
Q Consensus 542 ~~~~G~L~~~l~~~ 555 (571)
||++|+|.+.++..
T Consensus 159 YMDgGSLd~~~k~~ 172 (364)
T KOG0581|consen 159 YMDGGSLDDILKRV 172 (364)
T ss_pred hcCCCCHHHHHhhc
Confidence 99999999999853
No 41
>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.41 E-value=2.7e-13 Score=133.51 Aligned_cols=92 Identities=32% Similarity=0.503 Sum_probs=78.0
Q ss_pred cCCCccCeeeccCcceEEEEE-cCCCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhcCCCCcccEEEEEEeC--CeeEE
Q 044615 462 NNFDDGHCIGNGGQGSVYKAK-LPTGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKIRHRNIVKFYGFCSHA--LHSFV 538 (571)
Q Consensus 462 ~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~--~~~~l 538 (571)
+.|+..+.||+|.||.||+|+ ..+|+.||+|++..+.... ....-..|||.||++++|||||++.+...+. ..+||
T Consensus 117 ~~feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~~-~~~~t~~REI~ILr~l~HpNIikL~eivt~~~~~siYl 195 (560)
T KOG0600|consen 117 DSFEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNEKE-GFPITAIREIKILRRLDHPNIIKLEEIVTSKLSGSIYL 195 (560)
T ss_pred HHHHHHHHhcCcchhheeEeeecccCcEEEEEEeecccCCC-cchHHHHHHHHHHHhcCCCcccceeeEEEecCCceEEE
Confidence 457778899999999999999 7799999999998665332 3345567999999999999999999999876 68999
Q ss_pred EEeccCCCChhhhhccC
Q 044615 539 VYEYLEMGSLAMNLSND 555 (571)
Q Consensus 539 v~e~~~~G~L~~~l~~~ 555 (571)
|+|||+. ||.-++...
T Consensus 196 VFeYMdh-DL~GLl~~p 211 (560)
T KOG0600|consen 196 VFEYMDH-DLSGLLSSP 211 (560)
T ss_pred EEecccc-hhhhhhcCC
Confidence 9999997 898877653
No 42
>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]
Probab=99.41 E-value=6.2e-13 Score=129.89 Aligned_cols=97 Identities=30% Similarity=0.453 Sum_probs=81.2
Q ss_pred CCCccCeeeccCcceEEEEEcCCCCEEEEEEccCCCCCchHhHHHHHHHHHHHh--hcCCCCcccEEEEEEeCC----ee
Q 044615 463 NFDDGHCIGNGGQGSVYKAKLPTGEIVDVKKFHSPLPDEMACQQEFLNEVNALT--KIRHRNIVKFYGFCSHAL----HS 536 (571)
Q Consensus 463 ~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~--~l~H~niv~l~~~~~~~~----~~ 536 (571)
+.+....+|+|+||.||+|++ +++.||||++.. ...+.|..|-.|.+ .++|+||++++++-.... ++
T Consensus 211 pl~l~eli~~Grfg~V~KaqL-~~~~VAVKifp~------~~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~~~ey 283 (534)
T KOG3653|consen 211 PLQLLELIGRGRFGCVWKAQL-DNRLVAVKIFPE------QEKQSFQNEKNIYSLPGMKHENILQFIGAEKRGTADRMEY 283 (534)
T ss_pred chhhHHHhhcCccceeehhhc-cCceeEEEecCH------HHHHHHHhHHHHHhccCccchhHHHhhchhccCCccccce
Confidence 445667899999999999998 469999999863 33567888887765 579999999999887665 78
Q ss_pred EEEEeccCCCChhhhhccCCCccCCCHHHHhhhc
Q 044615 537 FVVYEYLEMGSLAMNLSNDAAAEQFCWTKRMNAI 570 (571)
Q Consensus 537 ~lv~e~~~~G~L~~~l~~~~~~~~l~w~~r~~ia 570 (571)
+||+||.+.|+|.+||+.. .++|....+||
T Consensus 284 wLVt~fh~kGsL~dyL~~n----tisw~~~cria 313 (534)
T KOG3653|consen 284 WLVTEFHPKGSLCDYLKAN----TISWNSLCRIA 313 (534)
T ss_pred eEEeeeccCCcHHHHHHhc----cccHHHHHHHH
Confidence 9999999999999999854 58999988876
No 43
>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]
Probab=99.41 E-value=3.8e-13 Score=123.92 Aligned_cols=95 Identities=22% Similarity=0.337 Sum_probs=86.3
Q ss_pred cCCCccCeeeccCcceEEEEE-cCCCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhcCCCCcccEEEEEEeCCeeEEEE
Q 044615 462 NNFDDGHCIGNGGQGSVYKAK-LPTGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKIRHRNIVKFYGFCSHALHSFVVY 540 (571)
Q Consensus 462 ~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~ 540 (571)
++|+..+.+|.|+||.|..++ ..+|..+|+|++++...-..+..++..+|..+++.+.||++|++++.|.+.+.+||||
T Consensus 44 ~dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~l~~t~~d~~~lymvm 123 (355)
T KOG0616|consen 44 QDFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVKLYGTFKDNSNLYMVM 123 (355)
T ss_pred hhhhheeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEEEEEeeccCCeEEEEE
Confidence 468889999999999999999 4578999999998876666677788999999999999999999999999999999999
Q ss_pred eccCCCChhhhhccCC
Q 044615 541 EYLEMGSLAMNLSNDA 556 (571)
Q Consensus 541 e~~~~G~L~~~l~~~~ 556 (571)
||++||.|+.++++.+
T Consensus 124 eyv~GGElFS~Lrk~~ 139 (355)
T KOG0616|consen 124 EYVPGGELFSYLRKSG 139 (355)
T ss_pred eccCCccHHHHHHhcC
Confidence 9999999999998643
No 44
>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]
Probab=99.41 E-value=2.8e-13 Score=122.94 Aligned_cols=92 Identities=24% Similarity=0.460 Sum_probs=80.1
Q ss_pred CCCccCeeeccCcceEEEEE-cCCCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhcCCCCcccEEEEEEeCCeeEEEEe
Q 044615 463 NFDDGHCIGNGGQGSVYKAK-LPTGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKIRHRNIVKFYGFCSHALHSFVVYE 541 (571)
Q Consensus 463 ~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~e 541 (571)
.|...+.+|+|.||.||+|+ .++|+.||||+++.....+ +-.....|||+.++.++|||||.++++|-..+.+.+|+|
T Consensus 3 rY~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kd-Gi~~talREIK~Lqel~h~nIi~LiD~F~~~~~l~lVfE 81 (318)
T KOG0659|consen 3 RYEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKD-GINRTALREIKLLQELKHPNIIELIDVFPHKSNLSLVFE 81 (318)
T ss_pred hhhhhhhhcCcceEEEEEEEecCCCcEEEEEEeecccccc-CccHHHHHHHHHHHHccCcchhhhhhhccCCCceEEEEE
Confidence 47788899999999999999 7799999999998764432 223457899999999999999999999999999999999
Q ss_pred ccCCCChhhhhccCC
Q 044615 542 YLEMGSLAMNLSNDA 556 (571)
Q Consensus 542 ~~~~G~L~~~l~~~~ 556 (571)
||+. ||+..|++..
T Consensus 82 fm~t-dLe~vIkd~~ 95 (318)
T KOG0659|consen 82 FMPT-DLEVVIKDKN 95 (318)
T ss_pred eccc-cHHHHhcccc
Confidence 9997 9999998654
No 45
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=99.39 E-value=9.1e-13 Score=134.61 Aligned_cols=94 Identities=23% Similarity=0.291 Sum_probs=81.3
Q ss_pred cCCCccCeeeccCcceEEEEE-cCCCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhcCCCCcccEEEEEEeCCeeEEEE
Q 044615 462 NNFDDGHCIGNGGQGSVYKAK-LPTGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKIRHRNIVKFYGFCSHALHSFVVY 540 (571)
Q Consensus 462 ~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~ 540 (571)
++|++.+.||+|+||.||+|+ ..+++.||||++.............+.+|++++..++||||+++++++.+++..|+||
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~ 80 (364)
T cd05599 1 DDFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKLYYSFQDENYLYLIM 80 (364)
T ss_pred CCceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCeEEEEE
Confidence 368899999999999999999 4579999999997543222234566889999999999999999999999999999999
Q ss_pred eccCCCChhhhhccC
Q 044615 541 EYLEMGSLAMNLSND 555 (571)
Q Consensus 541 e~~~~G~L~~~l~~~ 555 (571)
||+++|+|.+++...
T Consensus 81 E~~~~g~L~~~l~~~ 95 (364)
T cd05599 81 EYLPGGDMMTLLMKK 95 (364)
T ss_pred CCCCCcHHHHHHHHc
Confidence 999999999999754
No 46
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=99.39 E-value=1.2e-12 Score=134.38 Aligned_cols=93 Identities=18% Similarity=0.163 Sum_probs=81.6
Q ss_pred CCCccCeeeccCcceEEEEE-cCCCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhcCCCCcccEEEEEEeCCeeEEEEe
Q 044615 463 NFDDGHCIGNGGQGSVYKAK-LPTGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKIRHRNIVKFYGFCSHALHSFVVYE 541 (571)
Q Consensus 463 ~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~e 541 (571)
.|+..+.||+|+||+||+|+ ..+++.||+|++.+.........+.+.+|++++++++|||||++++++.+.+..|+|||
T Consensus 2 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~~~~~~~lv~E 81 (381)
T cd05626 2 MFVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMD 81 (381)
T ss_pred CceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCeeeeEEEEecCCEEEEEEe
Confidence 58889999999999999998 56889999999976443333445679999999999999999999999999999999999
Q ss_pred ccCCCChhhhhccC
Q 044615 542 YLEMGSLAMNLSND 555 (571)
Q Consensus 542 ~~~~G~L~~~l~~~ 555 (571)
|+++|+|.+++.+.
T Consensus 82 ~~~gg~L~~~l~~~ 95 (381)
T cd05626 82 YIPGGDMMSLLIRM 95 (381)
T ss_pred cCCCCcHHHHHHhc
Confidence 99999999999754
No 47
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=99.39 E-value=6.7e-13 Score=131.06 Aligned_cols=104 Identities=18% Similarity=0.257 Sum_probs=85.7
Q ss_pred cCCCccCeeeccCcceEEEEEc-CCCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhcCCCCcccEEEEEEeCCeeEEEE
Q 044615 462 NNFDDGHCIGNGGQGSVYKAKL-PTGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKIRHRNIVKFYGFCSHALHSFVVY 540 (571)
Q Consensus 462 ~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~ 540 (571)
++|+..+.||+|+||.||+|.. .+++.||+|++...........+.+.+|++++++++||||+++++++.+.+..|+||
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 80 (291)
T cd05612 1 DDLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLFWTEHDQRFLYMLM 80 (291)
T ss_pred CCceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHhhhHhhhccCCeEEEEE
Confidence 3688899999999999999994 579999999997543333334567889999999999999999999999999999999
Q ss_pred eccCCCChhhhhccCCCccCCCHHHHhh
Q 044615 541 EYLEMGSLAMNLSNDAAAEQFCWTKRMN 568 (571)
Q Consensus 541 e~~~~G~L~~~l~~~~~~~~l~w~~r~~ 568 (571)
||+++|+|.+++...+ .+++.....
T Consensus 81 e~~~~~~L~~~~~~~~---~~~~~~~~~ 105 (291)
T cd05612 81 EYVPGGELFSYLRNSG---RFSNSTGLF 105 (291)
T ss_pred eCCCCCCHHHHHHHcC---CCCHHHHHH
Confidence 9999999999997543 345554443
No 48
>KOG0532 consensus Leucine-rich repeat (LRR) protein, contains calponin homology domain [Cytoskeleton]
Probab=99.38 E-value=2e-14 Score=143.04 Aligned_cols=176 Identities=38% Similarity=0.611 Sum_probs=88.1
Q ss_pred CEEEcccCcCcccccccccCCCCCCeeecccCcCcccCCccccCCCCCCEEEccCCCCCccCChhhhhccCCCcEEEccC
Q 044615 124 VVLDLSTNKLSGSIPLSFANLTSLSILYLYENSLCDSIPKEIGNMNSLSILDLSSNKLNGSIPLSLANLTNSLKVLYLSS 203 (571)
Q Consensus 124 ~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~~L~~L~l~~ 203 (571)
...||+.|++. .+|..++.+..|+.+.|+.|.+. .+|..+..+..|++|+|+.|+++ .+|..+..++ |+.|.+++
T Consensus 78 ~~aDlsrNR~~-elp~~~~~f~~Le~liLy~n~~r-~ip~~i~~L~~lt~l~ls~NqlS-~lp~~lC~lp--Lkvli~sN 152 (722)
T KOG0532|consen 78 VFADLSRNRFS-ELPEEACAFVSLESLILYHNCIR-TIPEAICNLEALTFLDLSSNQLS-HLPDGLCDLP--LKVLIVSN 152 (722)
T ss_pred hhhhccccccc-cCchHHHHHHHHHHHHHHhccce-ecchhhhhhhHHHHhhhccchhh-cCChhhhcCc--ceeEEEec
Confidence 33444444444 34444444444555555555543 34444555555555555555554 4444444443 55555555
Q ss_pred CcccccCCccccCCCCCcEEeCccCcCcCCCChhhhCCCCCCEEEcccCccccccchhhccCCCCCEEEcCCccCccCcc
Q 044615 204 NHIVGEIPLGHGMLSSLIQLTLNNNELSGQLSPELGSLIQLEYLDLSANTFHKSIPESLSNLVKLHYLNLSNNQFSQKIP 283 (571)
Q Consensus 204 n~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~ 283 (571)
|+++ .+|..++....|..|+.+.|.+. .+|..++++.+|+.|.+..|++. .+|..+..| .|..||+|.|+++ .+|
T Consensus 153 Nkl~-~lp~~ig~~~tl~~ld~s~nei~-slpsql~~l~slr~l~vrRn~l~-~lp~El~~L-pLi~lDfScNkis-~iP 227 (722)
T KOG0532|consen 153 NKLT-SLPEEIGLLPTLAHLDVSKNEIQ-SLPSQLGYLTSLRDLNVRRNHLE-DLPEELCSL-PLIRLDFSCNKIS-YLP 227 (722)
T ss_pred Cccc-cCCcccccchhHHHhhhhhhhhh-hchHHhhhHHHHHHHHHhhhhhh-hCCHHHhCC-ceeeeecccCcee-ecc
Confidence 5554 34444444555555555555554 24445555555555555555554 233444433 3555555555554 445
Q ss_pred hhhhcccCCCEEEccCCcCCcccchhc
Q 044615 284 NKIEKLIHLSELDLSHNIFREEIPSQI 310 (571)
Q Consensus 284 ~~~~~l~~L~~L~Ls~n~l~~~~~~~~ 310 (571)
-.|.++.+|++|-|.+|.++. .|..+
T Consensus 228 v~fr~m~~Lq~l~LenNPLqS-PPAqI 253 (722)
T KOG0532|consen 228 VDFRKMRHLQVLQLENNPLQS-PPAQI 253 (722)
T ss_pred hhhhhhhhheeeeeccCCCCC-ChHHH
Confidence 555555555555555555543 34333
No 49
>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=99.38 E-value=1.1e-12 Score=131.95 Aligned_cols=95 Identities=23% Similarity=0.316 Sum_probs=84.5
Q ss_pred ccCCCccCeeeccCcceEEEEE-cCCCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhcC-CCCcccEEEEEEeCCeeEE
Q 044615 461 TNNFDDGHCIGNGGQGSVYKAK-LPTGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKIR-HRNIVKFYGFCSHALHSFV 538 (571)
Q Consensus 461 ~~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~-H~niv~l~~~~~~~~~~~l 538 (571)
...|+..+.||+|.||.||+++ ..+|+.+|+|.+.+.........+.+.+|+++|+++. |||||+++++|++....++
T Consensus 34 ~~~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~~~~~~l 113 (382)
T KOG0032|consen 34 KEKYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFEDPDSVYL 113 (382)
T ss_pred cccEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEEcCCeEEE
Confidence 4468888999999999999999 4569999999998766554444678999999999998 9999999999999999999
Q ss_pred EEeccCCCChhhhhccC
Q 044615 539 VYEYLEMGSLAMNLSND 555 (571)
Q Consensus 539 v~e~~~~G~L~~~l~~~ 555 (571)
|||+|.||+|++.|...
T Consensus 114 vmEL~~GGeLfd~i~~~ 130 (382)
T KOG0032|consen 114 VMELCEGGELFDRIVKK 130 (382)
T ss_pred EEEecCCchHHHHHHHc
Confidence 99999999999999754
No 50
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of
Probab=99.38 E-value=1.5e-12 Score=133.64 Aligned_cols=94 Identities=21% Similarity=0.236 Sum_probs=81.1
Q ss_pred cCCCccCeeeccCcceEEEEE-cCCCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhcCCCCcccEEEEEEeCCeeEEEE
Q 044615 462 NNFDDGHCIGNGGQGSVYKAK-LPTGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKIRHRNIVKFYGFCSHALHSFVVY 540 (571)
Q Consensus 462 ~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~ 540 (571)
++|.+.+.||+|+||.||++. ..+++.||||++.+.........+.+.+|++++++++|||||++++++.+....|+||
T Consensus 1 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~ 80 (377)
T cd05629 1 EDFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLYYSFQDAQYLYLIM 80 (377)
T ss_pred CCceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCeeEEEE
Confidence 368889999999999999998 5689999999986543222234567889999999999999999999999999999999
Q ss_pred eccCCCChhhhhccC
Q 044615 541 EYLEMGSLAMNLSND 555 (571)
Q Consensus 541 e~~~~G~L~~~l~~~ 555 (571)
||+++|+|.+++...
T Consensus 81 E~~~gg~L~~~l~~~ 95 (377)
T cd05629 81 EFLPGGDLMTMLIKY 95 (377)
T ss_pred eCCCCCcHHHHHHhc
Confidence 999999999999753
No 51
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=99.38 E-value=2.2e-12 Score=125.62 Aligned_cols=105 Identities=21% Similarity=0.306 Sum_probs=87.1
Q ss_pred cCCCccCeeeccCcceEEEEEc----CCCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhcCCCCcccEEEEEEeCCeeE
Q 044615 462 NNFDDGHCIGNGGQGSVYKAKL----PTGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKIRHRNIVKFYGFCSHALHSF 537 (571)
Q Consensus 462 ~~~~~~~~lg~G~~g~V~~~~~----~~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~ 537 (571)
.+|++.+.||+|+||.||+|.. ..+..||+|.++.... ....+.|.+|+..+++++||||+++++++..++..+
T Consensus 5 ~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~--~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~ 82 (266)
T cd05064 5 KSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCS--DKQRRGFLAEALTLGQFDHSNIVRLEGVITRGNTMM 82 (266)
T ss_pred HHeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCCC--HHHHHHHHHHHHHHhcCCCCCcCeEEEEEecCCCcE
Confidence 4588889999999999999974 2456899999975432 233567999999999999999999999999999999
Q ss_pred EEEeccCCCChhhhhccCCCccCCCHHHHhhhc
Q 044615 538 VVYEYLEMGSLAMNLSNDAAAEQFCWTKRMNAI 570 (571)
Q Consensus 538 lv~e~~~~G~L~~~l~~~~~~~~l~w~~r~~ia 570 (571)
+||||+++|+|.+++.... ..++|.+.+.++
T Consensus 83 lv~e~~~~~~L~~~l~~~~--~~l~~~~~~~~~ 113 (266)
T cd05064 83 IVTEYMSNGALDSFLRKHE--GQLVAGQLMGML 113 (266)
T ss_pred EEEEeCCCCcHHHHHHhCC--CCCCHHHHHHHH
Confidence 9999999999999997543 257788777654
No 52
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.
Probab=99.38 E-value=1.6e-12 Score=131.06 Aligned_cols=103 Identities=25% Similarity=0.317 Sum_probs=85.1
Q ss_pred cCCCccCeeeccCcceEEEEEc-CCCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhcCCCCcccEEEEEEeCCeeEEEE
Q 044615 462 NNFDDGHCIGNGGQGSVYKAKL-PTGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKIRHRNIVKFYGFCSHALHSFVVY 540 (571)
Q Consensus 462 ~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~ 540 (571)
++|++.+.||+|+||.||+|+. .+++.||||++.+.........+.+.+|++++..++||||+++++++.+.+..|+||
T Consensus 1 ~~y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~ 80 (333)
T cd05600 1 KDFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLLYAFQDDEYLYLAM 80 (333)
T ss_pred CCcEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCccEEEEEEcCCEEEEEE
Confidence 3688999999999999999994 478999999997543322334567899999999999999999999999999999999
Q ss_pred eccCCCChhhhhccCCCccCCCHHHHh
Q 044615 541 EYLEMGSLAMNLSNDAAAEQFCWTKRM 567 (571)
Q Consensus 541 e~~~~G~L~~~l~~~~~~~~l~w~~r~ 567 (571)
||+++|+|.+++.... .+++....
T Consensus 81 e~~~g~~L~~~l~~~~---~l~~~~~~ 104 (333)
T cd05600 81 EYVPGGDFRTLLNNLG---VLSEDHAR 104 (333)
T ss_pred eCCCCCCHHHHHHHcC---CCCHHHHH
Confidence 9999999999997543 34444433
No 53
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=99.37 E-value=1.7e-12 Score=132.39 Aligned_cols=104 Identities=18% Similarity=0.218 Sum_probs=85.8
Q ss_pred cCCCccCeeeccCcceEEEEE-cCCCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhcCCCCcccEEEEEEeCCeeEEEE
Q 044615 462 NNFDDGHCIGNGGQGSVYKAK-LPTGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKIRHRNIVKFYGFCSHALHSFVVY 540 (571)
Q Consensus 462 ~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~ 540 (571)
++|+..+.||+|+||+||+|. ..+++.||+|++.+.........+.+.+|+.++.+++||||+++++.+.+....|+||
T Consensus 1 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~~~~~~~lv~ 80 (363)
T cd05628 1 EDFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQDKLNLYLIM 80 (363)
T ss_pred CCceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCcceEEEEEecCCeEEEEE
Confidence 368899999999999999998 5578999999997543322334567889999999999999999999999999999999
Q ss_pred eccCCCChhhhhccCCCccCCCHHHHhh
Q 044615 541 EYLEMGSLAMNLSNDAAAEQFCWTKRMN 568 (571)
Q Consensus 541 e~~~~G~L~~~l~~~~~~~~l~w~~r~~ 568 (571)
||+++|+|.+++.+.+ .+++.....
T Consensus 81 E~~~gg~L~~~l~~~~---~l~~~~~~~ 105 (363)
T cd05628 81 EFLPGGDMMTLLMKKD---TLTEEETQF 105 (363)
T ss_pred cCCCCCcHHHHHHhcC---CCCHHHHHH
Confidence 9999999999997543 355554443
No 54
>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,
Probab=99.37 E-value=2.3e-12 Score=126.90 Aligned_cols=107 Identities=21% Similarity=0.230 Sum_probs=87.1
Q ss_pred CCCccCeeeccCcceEEEEE-cCCCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhcCCCCcccEEEEEEeCCeeEEEEe
Q 044615 463 NFDDGHCIGNGGQGSVYKAK-LPTGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKIRHRNIVKFYGFCSHALHSFVVYE 541 (571)
Q Consensus 463 ~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~e 541 (571)
.|+..+.||+|+||.||++. ..+++.||||++.............+.+|+.++++++||||+++++++.+++..++|||
T Consensus 1 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 80 (285)
T cd05605 1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLT 80 (285)
T ss_pred CceEEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEeeeeeeecCCCeEEEEEe
Confidence 37788999999999999999 45789999999975433332334567899999999999999999999999999999999
Q ss_pred ccCCCChhhhhccCCCccCCCHHHHhhhc
Q 044615 542 YLEMGSLAMNLSNDAAAEQFCWTKRMNAI 570 (571)
Q Consensus 542 ~~~~G~L~~~l~~~~~~~~l~w~~r~~ia 570 (571)
|+++|+|.+++.... ...+++.....++
T Consensus 81 ~~~~~~L~~~~~~~~-~~~~~~~~~~~~~ 108 (285)
T cd05605 81 LMNGGDLKFHIYNMG-NPGFDEERAVFYA 108 (285)
T ss_pred ccCCCcHHHHHHhcC-cCCCCHHHHHHHH
Confidence 999999999886432 2357777666553
No 55
>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.37 E-value=1.7e-12 Score=130.72 Aligned_cols=97 Identities=25% Similarity=0.393 Sum_probs=82.7
Q ss_pred HccCCCccCeeeccCcceEEEEE-cCCCCEEEEEEccCCCCC-c-hHhHHHHHHHHHHHhhcC-CCCcccEEEEEEeCCe
Q 044615 460 ATNNFDDGHCIGNGGQGSVYKAK-LPTGEIVDVKKFHSPLPD-E-MACQQEFLNEVNALTKIR-HRNIVKFYGFCSHALH 535 (571)
Q Consensus 460 ~~~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~-~-~~~~~~~~~Ei~~l~~l~-H~niv~l~~~~~~~~~ 535 (571)
..+.|..++.||+|+||+|+.|. ..+++.||+|.+.+.... . ....+.+.+|+.++++++ ||||+++++++.....
T Consensus 15 ~~g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t~~~ 94 (370)
T KOG0583|consen 15 SIGKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFATPTK 94 (370)
T ss_pred ccCceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEecCCe
Confidence 45679999999999999999998 568899999987764221 1 123456779999999999 9999999999999999
Q ss_pred eEEEEeccCCCChhhhhccCC
Q 044615 536 SFVVYEYLEMGSLAMNLSNDA 556 (571)
Q Consensus 536 ~~lv~e~~~~G~L~~~l~~~~ 556 (571)
.|+|||||.||+|++++.+++
T Consensus 95 ~~ivmEy~~gGdL~~~i~~~g 115 (370)
T KOG0583|consen 95 IYIVMEYCSGGDLFDYIVNKG 115 (370)
T ss_pred EEEEEEecCCccHHHHHHHcC
Confidence 999999999999999998743
No 56
>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i
Probab=99.36 E-value=2.6e-12 Score=126.53 Aligned_cols=106 Identities=21% Similarity=0.230 Sum_probs=87.0
Q ss_pred CCccCeeeccCcceEEEEE-cCCCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhcCCCCcccEEEEEEeCCeeEEEEec
Q 044615 464 FDDGHCIGNGGQGSVYKAK-LPTGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKIRHRNIVKFYGFCSHALHSFVVYEY 542 (571)
Q Consensus 464 ~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 542 (571)
|+..+.||+|+||.||+|. ..+|+.||||.+.+...........+.+|+.++++++||||+++.+++.+.+..++||||
T Consensus 2 f~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv~~~~~~~~~~~~~lv~e~ 81 (285)
T cd05631 2 FRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSLAYAYETKDALCLVLTI 81 (285)
T ss_pred ceEEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEEEEEEEEccCCeEEEEEEe
Confidence 6778899999999999998 568999999998754433323345688999999999999999999999999999999999
Q ss_pred cCCCChhhhhccCCCccCCCHHHHhhhc
Q 044615 543 LEMGSLAMNLSNDAAAEQFCWTKRMNAI 570 (571)
Q Consensus 543 ~~~G~L~~~l~~~~~~~~l~w~~r~~ia 570 (571)
+++|+|.+++.... ...+++.+...++
T Consensus 82 ~~~g~L~~~~~~~~-~~~~~~~~~~~~~ 108 (285)
T cd05631 82 MNGGDLKFHIYNMG-NPGFDEQRAIFYA 108 (285)
T ss_pred cCCCcHHHHHHhhC-CCCCCHHHHHHHH
Confidence 99999998886432 2357777766654
No 57
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=99.36 E-value=1.9e-12 Score=130.11 Aligned_cols=94 Identities=24% Similarity=0.310 Sum_probs=81.7
Q ss_pred cCCCccCeeeccCcceEEEEEc-CCCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhcCCCCcccEEEEEEeCCeeEEEE
Q 044615 462 NNFDDGHCIGNGGQGSVYKAKL-PTGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKIRHRNIVKFYGFCSHALHSFVVY 540 (571)
Q Consensus 462 ~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~ 540 (571)
++|++.+.||+|+||.||+|+. .+++.||||++...........+.+.+|+.++++++||||+++++++.+.+..|+||
T Consensus 18 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 97 (329)
T PTZ00263 18 SDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMCSFQDENRVYFLL 97 (329)
T ss_pred hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEEEcCCEEEEEE
Confidence 5688999999999999999994 578999999997543222234567899999999999999999999999999999999
Q ss_pred eccCCCChhhhhccC
Q 044615 541 EYLEMGSLAMNLSND 555 (571)
Q Consensus 541 e~~~~G~L~~~l~~~ 555 (571)
||+++|+|.+++.+.
T Consensus 98 e~~~~~~L~~~l~~~ 112 (329)
T PTZ00263 98 EFVVGGELFTHLRKA 112 (329)
T ss_pred cCCCCChHHHHHHHc
Confidence 999999999999754
No 58
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=99.36 E-value=2.9e-12 Score=124.02 Aligned_cols=103 Identities=20% Similarity=0.372 Sum_probs=86.6
Q ss_pred cCCCccCeeeccCcceEEEEEcCCCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhcCCCCcccEEEEEEeCCeeEEEEe
Q 044615 462 NNFDDGHCIGNGGQGSVYKAKLPTGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKIRHRNIVKFYGFCSHALHSFVVYE 541 (571)
Q Consensus 462 ~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~e 541 (571)
++|+..+.||+|+||.||++..+++..+|+|.+...... .++|.+|+.++++++||||+++++++.+.+..++|||
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~a~K~~~~~~~~----~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv~e 79 (256)
T cd05114 4 SELTFMKELGSGQFGVVHLGKWRAQIKVAIKAINEGAMS----EEDFIEEAKVMMKLSHPKLVQLYGVCTQQKPLYIVTE 79 (256)
T ss_pred HHcEEeeEecCCcCceEEEEEeccCceEEEEecccCCcc----HHHHHHHHHHHHHCCCCCceeEEEEEccCCCEEEEEE
Confidence 357888999999999999999877788999998644222 3578899999999999999999999999999999999
Q ss_pred ccCCCChhhhhccCCCccCCCHHHHhhhc
Q 044615 542 YLEMGSLAMNLSNDAAAEQFCWTKRMNAI 570 (571)
Q Consensus 542 ~~~~G~L~~~l~~~~~~~~l~w~~r~~ia 570 (571)
|+++|+|.++++.... .++|..++.++
T Consensus 80 ~~~~~~L~~~~~~~~~--~~~~~~~~~~~ 106 (256)
T cd05114 80 FMENGCLLNYLRQRQG--KLSKDMLLSMC 106 (256)
T ss_pred cCCCCcHHHHHHhCcc--CCCHHHHHHHH
Confidence 9999999999975432 47777766654
No 59
>PHA02988 hypothetical protein; Provisional
Probab=99.36 E-value=4.1e-12 Score=124.89 Aligned_cols=100 Identities=22% Similarity=0.335 Sum_probs=83.5
Q ss_pred cCeeeccCcceEEEEEcCCCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhcCCCCcccEEEEEEe----CCeeEEEEec
Q 044615 467 GHCIGNGGQGSVYKAKLPTGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKIRHRNIVKFYGFCSH----ALHSFVVYEY 542 (571)
Q Consensus 467 ~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~----~~~~~lv~e~ 542 (571)
...+|+|++|.||+|.. +|+.||||.+...........+.|.+|+.++++++|||||+++|++.+ ....++||||
T Consensus 25 ~~~i~~g~~~~v~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~~~~~~~~~~lv~Ey 103 (283)
T PHA02988 25 SVLIKENDQNSIYKGIF-NNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKIYGFIIDIVDDLPRLSLILEY 103 (283)
T ss_pred CeEEeeCCceEEEEEEE-CCEEEEEEeccccccccHHHHHHHHHHHHHHHhcCCCCEEEEeeeEEecccCCCceEEEEEe
Confidence 36799999999999998 688999999976544443345778999999999999999999999977 4568999999
Q ss_pred cCCCChhhhhccCCCccCCCHHHHhhhc
Q 044615 543 LEMGSLAMNLSNDAAAEQFCWTKRMNAI 570 (571)
Q Consensus 543 ~~~G~L~~~l~~~~~~~~l~w~~r~~ia 570 (571)
+++|+|.+++++.. .++|..++++|
T Consensus 104 ~~~g~L~~~l~~~~---~~~~~~~~~i~ 128 (283)
T PHA02988 104 CTRGYLREVLDKEK---DLSFKTKLDMA 128 (283)
T ss_pred CCCCcHHHHHhhCC---CCChhHHHHHH
Confidence 99999999998542 57787777664
No 60
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=99.35 E-value=2.6e-12 Score=131.81 Aligned_cols=94 Identities=18% Similarity=0.180 Sum_probs=81.0
Q ss_pred cCCCccCeeeccCcceEEEEE-cCCCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhcCCCCcccEEEEEEeCCeeEEEE
Q 044615 462 NNFDDGHCIGNGGQGSVYKAK-LPTGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKIRHRNIVKFYGFCSHALHSFVVY 540 (571)
Q Consensus 462 ~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~ 540 (571)
++|++.+.||+|+||.||+|+ ..+++.||||++.+.........+.+.+|++++++++||||+++++.+.+.+..|+||
T Consensus 1 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~ 80 (376)
T cd05598 1 SMFVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVM 80 (376)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcceEEEEEEcCCEEEEEE
Confidence 368999999999999999999 5579999999986533222233566889999999999999999999999999999999
Q ss_pred eccCCCChhhhhccC
Q 044615 541 EYLEMGSLAMNLSND 555 (571)
Q Consensus 541 e~~~~G~L~~~l~~~ 555 (571)
||+++|+|.+++.+.
T Consensus 81 E~~~~g~L~~~i~~~ 95 (376)
T cd05598 81 DYIPGGDMMSLLIRL 95 (376)
T ss_pred eCCCCCcHHHHHHhc
Confidence 999999999999754
No 61
>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.35 E-value=2.9e-12 Score=129.52 Aligned_cols=97 Identities=24% Similarity=0.315 Sum_probs=85.2
Q ss_pred HHccCCCccCeeeccCcceEEEEE-cCCCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhcCCCCcccEEEEEEeCCeeE
Q 044615 459 RATNNFDDGHCIGNGGQGSVYKAK-LPTGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKIRHRNIVKFYGFCSHALHSF 537 (571)
Q Consensus 459 ~~~~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~ 537 (571)
...+.|.+...||+|.|++|..|+ ..++..||+|.+++..-.. ...+.+.+|+++|+.++|||||+++.+.++...+|
T Consensus 53 ~~vg~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~-~~~~k~~rev~imk~l~HPnIvkl~~v~~t~~~ly 131 (596)
T KOG0586|consen 53 NSVGLYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNP-SKRQKLGREVDIMKSLNHPNIVKLFSVIETEATLY 131 (596)
T ss_pred ccccceeeeeeeccceeEEEEeeEecCCCceEEEEEehhcccCh-HHHHHHHHHHHHHHhcCCcceeeeeeeeeecceeE
Confidence 345678999999999999999999 4589999999998765443 44456889999999999999999999999999999
Q ss_pred EEEeccCCCChhhhhccCC
Q 044615 538 VVYEYLEMGSLAMNLSNDA 556 (571)
Q Consensus 538 lv~e~~~~G~L~~~l~~~~ 556 (571)
+||||+.+|++++++...+
T Consensus 132 lV~eya~~ge~~~yl~~~g 150 (596)
T KOG0586|consen 132 LVMEYASGGELFDYLVKHG 150 (596)
T ss_pred EEEEeccCchhHHHHHhcc
Confidence 9999999999999998654
No 62
>PRK13184 pknD serine/threonine-protein kinase; Reviewed
Probab=99.34 E-value=5e-12 Score=138.27 Aligned_cols=109 Identities=26% Similarity=0.336 Sum_probs=89.6
Q ss_pred cCCCccCeeeccCcceEEEEE-cCCCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhcCCCCcccEEEEEEeCCeeEEEE
Q 044615 462 NNFDDGHCIGNGGQGSVYKAK-LPTGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKIRHRNIVKFYGFCSHALHSFVVY 540 (571)
Q Consensus 462 ~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~ 540 (571)
++|++.+.||+|+||.||+|. ..+|+.||+|++...........++|.+|++++++++|||||++++++.+++..|+||
T Consensus 2 grYeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~d~~~lyLVM 81 (932)
T PRK13184 2 QRYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVYSICSDGDPVYYTM 81 (932)
T ss_pred CCeEEEEEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCeEEEEEeeCCEEEEEE
Confidence 578999999999999999999 4579999999997654444445678999999999999999999999999999999999
Q ss_pred eccCCCChhhhhccCC--------CccCCCHHHHhhhc
Q 044615 541 EYLEMGSLAMNLSNDA--------AAEQFCWTKRMNAI 570 (571)
Q Consensus 541 e~~~~G~L~~~l~~~~--------~~~~l~w~~r~~ia 570 (571)
||++||+|.+++.... ....++|...++|+
T Consensus 82 EY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~ 119 (932)
T PRK13184 82 PYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIF 119 (932)
T ss_pred EcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHH
Confidence 9999999999986421 12345666655543
No 63
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=99.34 E-value=3e-12 Score=129.16 Aligned_cols=104 Identities=20% Similarity=0.222 Sum_probs=84.0
Q ss_pred cCCCccCeeeccCcceEEEEEcC-C-CCEEEEEEccCCCCCchHhHHHHHHHHHHHhhcCCCCcccEEEEEEeCCeeEEE
Q 044615 462 NNFDDGHCIGNGGQGSVYKAKLP-T-GEIVDVKKFHSPLPDEMACQQEFLNEVNALTKIRHRNIVKFYGFCSHALHSFVV 539 (571)
Q Consensus 462 ~~~~~~~~lg~G~~g~V~~~~~~-~-~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv 539 (571)
++|+..+.||+|+||.||+|..+ . +..||+|++.+.........+.+.+|+++++.++|||||++++++.+.+..|+|
T Consensus 30 ~~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv 109 (340)
T PTZ00426 30 EDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNLYGSFKDESYLYLV 109 (340)
T ss_pred hhcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCcceEEEEEeCCEEEEE
Confidence 46889999999999999999843 3 468999998654322233456788999999999999999999999999999999
Q ss_pred EeccCCCChhhhhccCCCccCCCHHHHhh
Q 044615 540 YEYLEMGSLAMNLSNDAAAEQFCWTKRMN 568 (571)
Q Consensus 540 ~e~~~~G~L~~~l~~~~~~~~l~w~~r~~ 568 (571)
|||+++|+|.+++.... .+++.....
T Consensus 110 ~Ey~~~g~L~~~i~~~~---~~~~~~~~~ 135 (340)
T PTZ00426 110 LEFVIGGEFFTFLRRNK---RFPNDVGCF 135 (340)
T ss_pred EeCCCCCcHHHHHHHcC---CCCHHHHHH
Confidence 99999999999997543 355554443
No 64
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=99.34 E-value=2.8e-12 Score=131.30 Aligned_cols=92 Identities=26% Similarity=0.416 Sum_probs=78.3
Q ss_pred ccCCCccCeeeccCcceEEEEEc------CCCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhc-CCCCcccEEEEEEeC
Q 044615 461 TNNFDDGHCIGNGGQGSVYKAKL------PTGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKI-RHRNIVKFYGFCSHA 533 (571)
Q Consensus 461 ~~~~~~~~~lg~G~~g~V~~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l-~H~niv~l~~~~~~~ 533 (571)
.++|++.+.||+|+||.||+|.. .++..||||+++.... ....+.+.+|++++..+ +|||||+++++|.+.
T Consensus 34 ~~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~--~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~~~~ 111 (375)
T cd05104 34 RNRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAH--LTEREALMSELKVLSYLGNHINIVNLLGACTVG 111 (375)
T ss_pred hHHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCcC--cHHHHHHHHHHHHHHHhcCCcceeeeeeeeccC
Confidence 34688899999999999999962 2456899999975432 23356789999999999 899999999999999
Q ss_pred CeeEEEEeccCCCChhhhhcc
Q 044615 534 LHSFVVYEYLEMGSLAMNLSN 554 (571)
Q Consensus 534 ~~~~lv~e~~~~G~L~~~l~~ 554 (571)
+..++|||||++|+|.++++.
T Consensus 112 ~~~~lv~E~~~~g~L~~~l~~ 132 (375)
T cd05104 112 GPTLVITEYCCYGDLLNFLRR 132 (375)
T ss_pred CcceeeehhccCCcHHHHHHh
Confidence 999999999999999999974
No 65
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=99.34 E-value=5.4e-12 Score=125.47 Aligned_cols=91 Identities=25% Similarity=0.410 Sum_probs=77.3
Q ss_pred cCCCccCeeeccCcceEEEEEcC-----------------CCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhcCCCCcc
Q 044615 462 NNFDDGHCIGNGGQGSVYKAKLP-----------------TGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKIRHRNIV 524 (571)
Q Consensus 462 ~~~~~~~~lg~G~~g~V~~~~~~-----------------~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~H~niv 524 (571)
++|.+.+.||+|+||.||+|... ++..||+|.+..... .....+|.+|++++.+++||||+
T Consensus 5 ~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~E~~~l~~l~h~niv 82 (304)
T cd05096 5 GHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDAN--KNARNDFLKEVKILSRLKDPNII 82 (304)
T ss_pred hhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCC--HHHHHHHHHHHHHHhhcCCCCee
Confidence 46888899999999999999742 234699999875432 23356799999999999999999
Q ss_pred cEEEEEEeCCeeEEEEeccCCCChhhhhcc
Q 044615 525 KFYGFCSHALHSFVVYEYLEMGSLAMNLSN 554 (571)
Q Consensus 525 ~l~~~~~~~~~~~lv~e~~~~G~L~~~l~~ 554 (571)
++++++.+.+..++||||+++|+|.+++..
T Consensus 83 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~ 112 (304)
T cd05096 83 RLLGVCVDEDPLCMITEYMENGDLNQFLSS 112 (304)
T ss_pred EEEEEEecCCceEEEEecCCCCcHHHHHHh
Confidence 999999999999999999999999999864
No 66
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=99.34 E-value=3e-12 Score=131.60 Aligned_cols=93 Identities=17% Similarity=0.169 Sum_probs=81.0
Q ss_pred CCCccCeeeccCcceEEEEE-cCCCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhcCCCCcccEEEEEEeCCeeEEEEe
Q 044615 463 NFDDGHCIGNGGQGSVYKAK-LPTGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKIRHRNIVKFYGFCSHALHSFVVYE 541 (571)
Q Consensus 463 ~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~e 541 (571)
.|+..+.||+|+||.||+|+ ..+++.||+|++.+.........+.+.+|++++++++|||||++++++.+.+..|+|||
T Consensus 2 ~f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~~~~~~~lv~E 81 (382)
T cd05625 2 MFVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVMD 81 (382)
T ss_pred CcEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEEeCCEEEEEEe
Confidence 48889999999999999999 55789999999975433223345678999999999999999999999999999999999
Q ss_pred ccCCCChhhhhccC
Q 044615 542 YLEMGSLAMNLSND 555 (571)
Q Consensus 542 ~~~~G~L~~~l~~~ 555 (571)
||++|+|.+++.+.
T Consensus 82 ~~~gg~L~~~l~~~ 95 (382)
T cd05625 82 YIPGGDMMSLLIRM 95 (382)
T ss_pred CCCCCcHHHHHHhc
Confidence 99999999999754
No 67
>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=99.33 E-value=2.8e-12 Score=139.41 Aligned_cols=106 Identities=25% Similarity=0.391 Sum_probs=84.5
Q ss_pred CCCccCeeeccCcceEEEEEcC--CCC----EEEEEEccCCCCCchHhHHHHHHHHHHHhhcCCCCcccEEEEEEeCCee
Q 044615 463 NFDDGHCIGNGGQGSVYKAKLP--TGE----IVDVKKFHSPLPDEMACQQEFLNEVNALTKIRHRNIVKFYGFCSHALHS 536 (571)
Q Consensus 463 ~~~~~~~lg~G~~g~V~~~~~~--~~~----~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~ 536 (571)
..+..+.||+|+||.||.|... .|. .||||.+.+. .+.+...+|.+|..+|+.++|||||+++|+|.+....
T Consensus 693 ~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~--~~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~~~~~ 770 (1025)
T KOG1095|consen 693 NVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRL--SSEQEVSDFLKEALLMSKFDHPNIVSLIGVCLDSGPP 770 (1025)
T ss_pred heEeeeeeccccccceEEEEEecCCCCccceEEEEEecccc--CCHHHHHHHHHHHHHHhcCCCcceeeEEEeecCCCCc
Confidence 3456788999999999999853 343 4899998754 3345678899999999999999999999999999999
Q ss_pred EEEEeccCCCChhhhhccCCC----ccCCCHHHHhhhc
Q 044615 537 FVVYEYLEMGSLAMNLSNDAA----AEQFCWTKRMNAI 570 (571)
Q Consensus 537 ~lv~e~~~~G~L~~~l~~~~~----~~~l~w~~r~~ia 570 (571)
+|++|||++|||..+|++.+. ...|+-...+.+|
T Consensus 771 ~i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a 808 (1025)
T KOG1095|consen 771 LILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFA 808 (1025)
T ss_pred EEEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHH
Confidence 999999999999999987532 2235544444443
No 68
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=99.33 E-value=4.3e-12 Score=127.70 Aligned_cols=93 Identities=24% Similarity=0.226 Sum_probs=80.3
Q ss_pred cCCCccCeeeccCcceEEEEE-cCCCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhcCCCCcccEEEEEEeCCeeEEEE
Q 044615 462 NNFDDGHCIGNGGQGSVYKAK-LPTGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKIRHRNIVKFYGFCSHALHSFVVY 540 (571)
Q Consensus 462 ~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~ 540 (571)
++|++.+.||+|+||.||+++ ..+++.||+|++.+.........+.+.+|+.++..++||||+++++++.+.+..|+||
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (331)
T cd05597 1 DDFEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNLHYAFQDENNLYLVM 80 (331)
T ss_pred CCceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCceEEEEecCCeEEEEE
Confidence 368899999999999999999 4578999999987532222233566889999999999999999999999999999999
Q ss_pred eccCCCChhhhhcc
Q 044615 541 EYLEMGSLAMNLSN 554 (571)
Q Consensus 541 e~~~~G~L~~~l~~ 554 (571)
||+++|+|.+++.+
T Consensus 81 e~~~g~~L~~~l~~ 94 (331)
T cd05597 81 DYYVGGDLLTLLSK 94 (331)
T ss_pred ecCCCCcHHHHHHH
Confidence 99999999999975
No 69
>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-
Probab=99.33 E-value=5.6e-12 Score=129.63 Aligned_cols=92 Identities=24% Similarity=0.382 Sum_probs=78.0
Q ss_pred ccCCCccCeeeccCcceEEEEEc-C-----CCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhcC-CCCcccEEEEEEeC
Q 044615 461 TNNFDDGHCIGNGGQGSVYKAKL-P-----TGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKIR-HRNIVKFYGFCSHA 533 (571)
Q Consensus 461 ~~~~~~~~~lg~G~~g~V~~~~~-~-----~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~-H~niv~l~~~~~~~ 533 (571)
.+.|.+.+.||+|+||.||+|.. . .+..||||++..... ....+.|.+|+++++++. |||||+++++|.+.
T Consensus 36 ~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~--~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~~~~ 113 (400)
T cd05105 36 RDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTAR--SSEKQALMSELKIMTHLGPHLNIVNLLGACTKS 113 (400)
T ss_pred ccceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCCC--hHHHHHHHHHHHHHHhcCCCCCeeeEEEEEccC
Confidence 45788999999999999999973 2 234699999975432 233567999999999996 99999999999999
Q ss_pred CeeEEEEeccCCCChhhhhcc
Q 044615 534 LHSFVVYEYLEMGSLAMNLSN 554 (571)
Q Consensus 534 ~~~~lv~e~~~~G~L~~~l~~ 554 (571)
+..|+|||||++|+|.++|+.
T Consensus 114 ~~~~lv~Ey~~~g~L~~~l~~ 134 (400)
T cd05105 114 GPIYIITEYCFYGDLVNYLHK 134 (400)
T ss_pred CceEEEEEecCCCcHHHHHHH
Confidence 999999999999999999874
No 70
>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]
Probab=99.33 E-value=9.2e-13 Score=123.26 Aligned_cols=95 Identities=32% Similarity=0.421 Sum_probs=78.7
Q ss_pred HHccCCCccCeeeccCcceEEEEE-cCCCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhcCCCCcccEEEEEEeC--Ce
Q 044615 459 RATNNFDDGHCIGNGGQGSVYKAK-LPTGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKIRHRNIVKFYGFCSHA--LH 535 (571)
Q Consensus 459 ~~~~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~--~~ 535 (571)
+..++|+..+.|++|.||.||+|+ .++++.||+|+++.+.... +..---.|||.++.+++|||||.+..+.... +.
T Consensus 73 rsv~efe~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~-GFPItsLREIniLl~~~H~NIV~vkEVVvG~~~d~ 151 (419)
T KOG0663|consen 73 RSVEEFEKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKE-GFPITSLREINILLKARHPNIVEVKEVVVGSNMDK 151 (419)
T ss_pred ccHHHHHHHhhcccCcceeEEEeccCCcceeEEeeecccccccC-CCcchhHHHHHHHHhcCCCCeeeeEEEEeccccce
Confidence 344568889999999999999999 6689999999998765332 2233457999999999999999999988754 57
Q ss_pred eEEEEeccCCCChhhhhccC
Q 044615 536 SFVVYEYLEMGSLAMNLSND 555 (571)
Q Consensus 536 ~~lv~e~~~~G~L~~~l~~~ 555 (571)
+|||||||+. ||...++.-
T Consensus 152 iy~VMe~~Eh-DLksl~d~m 170 (419)
T KOG0663|consen 152 IYIVMEYVEH-DLKSLMETM 170 (419)
T ss_pred eeeeHHHHHh-hHHHHHHhc
Confidence 9999999997 999988753
No 71
>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]
Probab=99.32 E-value=6.4e-13 Score=122.69 Aligned_cols=90 Identities=26% Similarity=0.465 Sum_probs=75.1
Q ss_pred cCCCccCeeeccCcceEEEEE-cCCCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhcCCCCcccEEEEEEeCCeeEEEE
Q 044615 462 NNFDDGHCIGNGGQGSVYKAK-LPTGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKIRHRNIVKFYGFCSHALHSFVVY 540 (571)
Q Consensus 462 ~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~ 540 (571)
+.|+...++|+|+||+||+++ ..+|+.||||++..+. ++....+-.+|||+++++++|||+|.++++|.....+++|+
T Consensus 2 ekYE~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Ese-dd~~VkKIAlREIrmLKqLkH~NLVnLiEVFrrkrklhLVF 80 (396)
T KOG0593|consen 2 EKYEKLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVESE-DDPVVKKIALREIRMLKQLKHENLVNLIEVFRRKRKLHLVF 80 (396)
T ss_pred cHHhhhhccccCcceEEEEeccCCcccEEEEEeeccCC-ccHHHHHHHHHHHHHHHhcccchHHHHHHHHHhcceeEEEe
Confidence 358888999999999999999 4589999999996543 33344566789999999999999999999999999999999
Q ss_pred eccCCCChhhhhc
Q 044615 541 EYLEMGSLAMNLS 553 (571)
Q Consensus 541 e~~~~G~L~~~l~ 553 (571)
|||+. ++.+-|.
T Consensus 81 E~~dh-TvL~eLe 92 (396)
T KOG0593|consen 81 EYCDH-TVLHELE 92 (396)
T ss_pred eecch-HHHHHHH
Confidence 99987 4433343
No 72
>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.
Probab=99.32 E-value=5.6e-12 Score=126.88 Aligned_cols=93 Identities=24% Similarity=0.170 Sum_probs=79.9
Q ss_pred cCCCccCeeeccCcceEEEEE-cCCCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhcCCCCcccEEEEEEeCCeeEEEE
Q 044615 462 NNFDDGHCIGNGGQGSVYKAK-LPTGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKIRHRNIVKFYGFCSHALHSFVVY 540 (571)
Q Consensus 462 ~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~ 540 (571)
++|++.+.||+|+||.||+++ ..+++.||+|.+.+.........+.+.+|+.++..++||||+++++++.+.+..|+||
T Consensus 1 d~y~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~~~~~~~~lv~ 80 (331)
T cd05624 1 DDFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQWITTLHYAFQDENYLYLVM 80 (331)
T ss_pred CCceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEE
Confidence 368899999999999999999 4578899999986532222233456888999999999999999999999999999999
Q ss_pred eccCCCChhhhhcc
Q 044615 541 EYLEMGSLAMNLSN 554 (571)
Q Consensus 541 e~~~~G~L~~~l~~ 554 (571)
||+++|+|.+++..
T Consensus 81 Ey~~gg~L~~~l~~ 94 (331)
T cd05624 81 DYYVGGDLLTLLSK 94 (331)
T ss_pred eCCCCCcHHHHHHH
Confidence 99999999999975
No 73
>COG4886 Leucine-rich repeat (LRR) protein [Function unknown]
Probab=99.31 E-value=3.2e-12 Score=131.95 Aligned_cols=199 Identities=40% Similarity=0.522 Sum_probs=114.2
Q ss_pred EEecccCcCcccccccccCCCCCCEEEcccCcCcccccccccCCC-CCCeeecccCcCcccCCccccCCCCCCEEEccCC
Q 044615 101 DLQLSENILNGSIPLALGNLTNLVVLDLSTNKLSGSIPLSFANLT-SLSILYLYENSLCDSIPKEIGNMNSLSILDLSSN 179 (571)
Q Consensus 101 ~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~-~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n 179 (571)
.+++..|.+.. ....+..++.++.|++.+|.++ .++.....+. +|+.|++++|.+. .+|..+..+++|+.|++++|
T Consensus 97 ~l~~~~~~~~~-~~~~~~~~~~l~~L~l~~n~i~-~i~~~~~~~~~nL~~L~l~~N~i~-~l~~~~~~l~~L~~L~l~~N 173 (394)
T COG4886 97 SLDLNLNRLRS-NISELLELTNLTSLDLDNNNIT-DIPPLIGLLKSNLKELDLSDNKIE-SLPSPLRNLPNLKNLDLSFN 173 (394)
T ss_pred eeecccccccc-CchhhhcccceeEEecCCcccc-cCccccccchhhcccccccccchh-hhhhhhhccccccccccCCc
Confidence 45555555531 2233344456666666666665 3344444443 6666666666664 34445566666666666666
Q ss_pred CCCccCChhhhhccCCCcEEEccCCcccccCCccccCCCCCcEEeCccCcCcCCCChhhhCCCCCCEEEcccCccccccc
Q 044615 180 KLNGSIPLSLANLTNSLKVLYLSSNHIVGEIPLGHGMLSSLIQLTLNNNELSGQLSPELGSLIQLEYLDLSANTFHKSIP 259 (571)
Q Consensus 180 ~l~~~~p~~~~~l~~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~ 259 (571)
++. .+|......+. |+.|++++|.+. .+|...+....|++|.+++|.+. ..+..+..+.++..+.+.+|.+.. .+
T Consensus 174 ~l~-~l~~~~~~~~~-L~~L~ls~N~i~-~l~~~~~~~~~L~~l~~~~N~~~-~~~~~~~~~~~l~~l~l~~n~~~~-~~ 248 (394)
T COG4886 174 DLS-DLPKLLSNLSN-LNNLDLSGNKIS-DLPPEIELLSALEELDLSNNSII-ELLSSLSNLKNLSGLELSNNKLED-LP 248 (394)
T ss_pred hhh-hhhhhhhhhhh-hhheeccCCccc-cCchhhhhhhhhhhhhhcCCcce-ecchhhhhcccccccccCCceeee-cc
Confidence 665 44444334443 666666666665 34443344445666666666433 234456666666666666666542 24
Q ss_pred hhhccCCCCCEEEcCCccCccCcchhhhcccCCCEEEccCCcCCcccchh
Q 044615 260 ESLSNLVKLHYLNLSNNQFSQKIPNKIEKLIHLSELDLSHNIFREEIPSQ 309 (571)
Q Consensus 260 ~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~ 309 (571)
..+..+++++.|++++|+++...+ +..+.+++.|++++|.+....+..
T Consensus 249 ~~~~~l~~l~~L~~s~n~i~~i~~--~~~~~~l~~L~~s~n~~~~~~~~~ 296 (394)
T COG4886 249 ESIGNLSNLETLDLSNNQISSISS--LGSLTNLRELDLSGNSLSNALPLI 296 (394)
T ss_pred chhccccccceecccccccccccc--ccccCccCEEeccCccccccchhh
Confidence 556666677777777777764332 666667777777777766555443
No 74
>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]
Probab=99.31 E-value=2.4e-12 Score=123.96 Aligned_cols=95 Identities=20% Similarity=0.205 Sum_probs=82.6
Q ss_pred CCCccCeeeccCcceEEEEEcC-CCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhcCCCCcccEEEEEEeCCeeEEEEe
Q 044615 463 NFDDGHCIGNGGQGSVYKAKLP-TGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKIRHRNIVKFYGFCSHALHSFVVYE 541 (571)
Q Consensus 463 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~e 541 (571)
.|+..+.||.|.-|+||.++.+ ++..+|+|++.+......+...+...|-+||+.++||.++.+|+.+++....|+|||
T Consensus 78 ~f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDHPFlPTLYa~fet~~~~cl~me 157 (459)
T KOG0610|consen 78 HFRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLLDHPFLPTLYASFETDKYSCLVME 157 (459)
T ss_pred HHHHHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCCCccchhhheeeccceeEEEEe
Confidence 3566788999999999999954 578999999988766555556678889999999999999999999999999999999
Q ss_pred ccCCCChhhhhccCCC
Q 044615 542 YLEMGSLAMNLSNDAA 557 (571)
Q Consensus 542 ~~~~G~L~~~l~~~~~ 557 (571)
||+||||+...+++..
T Consensus 158 yCpGGdL~~LrqkQp~ 173 (459)
T KOG0610|consen 158 YCPGGDLHSLRQKQPG 173 (459)
T ss_pred cCCCccHHHHHhhCCC
Confidence 9999999998886543
No 75
>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul
Probab=99.31 E-value=6.4e-12 Score=128.10 Aligned_cols=94 Identities=20% Similarity=0.254 Sum_probs=80.9
Q ss_pred cCCCccCeeeccCcceEEEEE-cCCCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhcCCCCcccEEEEEEeCCeeEEEE
Q 044615 462 NNFDDGHCIGNGGQGSVYKAK-LPTGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKIRHRNIVKFYGFCSHALHSFVVY 540 (571)
Q Consensus 462 ~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~ 540 (571)
++|+..+.||+|+||.||+|. ..+++.||+|++.+.........+.+.+|+.++.+++||||+++++.+.+.+..|+||
T Consensus 1 ~~f~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~~~lv~ 80 (360)
T cd05627 1 DDFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMFYSFQDKRNLYLIM 80 (360)
T ss_pred CCceEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEE
Confidence 368889999999999999998 4579999999997533222233567889999999999999999999999999999999
Q ss_pred eccCCCChhhhhccC
Q 044615 541 EYLEMGSLAMNLSND 555 (571)
Q Consensus 541 e~~~~G~L~~~l~~~ 555 (571)
||+++|+|.+++.+.
T Consensus 81 E~~~gg~L~~~l~~~ 95 (360)
T cd05627 81 EFLPGGDMMTLLMKK 95 (360)
T ss_pred eCCCCccHHHHHHhc
Confidence 999999999999754
No 76
>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be
Probab=99.31 E-value=7.8e-12 Score=125.41 Aligned_cols=99 Identities=20% Similarity=0.183 Sum_probs=80.8
Q ss_pred CeeeccCcceEEEEE-cCCCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhcCCCCcccEEEEEEeCCeeEEEEeccCCC
Q 044615 468 HCIGNGGQGSVYKAK-LPTGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKIRHRNIVKFYGFCSHALHSFVVYEYLEMG 546 (571)
Q Consensus 468 ~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~G 546 (571)
+.||+|+||.||+|+ ..+|+.||+|++.+...........+.+|++++++++||||+++++++...+..|+||||+++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~~~~ 80 (323)
T cd05571 1 KLLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTALKYSFQTHDRLCFVMEYANGG 80 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCCEEEEEEcCCEEEEEEeCCCCC
Confidence 469999999999998 5689999999997543323334567889999999999999999999999999999999999999
Q ss_pred ChhhhhccCCCccCCCHHHHhhh
Q 044615 547 SLAMNLSNDAAAEQFCWTKRMNA 569 (571)
Q Consensus 547 ~L~~~l~~~~~~~~l~w~~r~~i 569 (571)
+|.+++...+ .+++.+...|
T Consensus 81 ~L~~~l~~~~---~~~~~~~~~~ 100 (323)
T cd05571 81 ELFFHLSRER---VFSEDRARFY 100 (323)
T ss_pred cHHHHHHHcC---CCCHHHHHHH
Confidence 9999997532 3555554433
No 77
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found
Probab=99.31 E-value=4.8e-12 Score=129.17 Aligned_cols=96 Identities=18% Similarity=0.212 Sum_probs=81.9
Q ss_pred HccCCCccCeeeccCcceEEEEEc-CCCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhcCCCCcccEEEEEEeCCeeEE
Q 044615 460 ATNNFDDGHCIGNGGQGSVYKAKL-PTGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKIRHRNIVKFYGFCSHALHSFV 538 (571)
Q Consensus 460 ~~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~l 538 (571)
..++|+..+.||+|+||.||+++. .+++.||+|.+.+.........+.+.+|+.+++.++||||+++++++.+....|+
T Consensus 41 ~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~~~l 120 (370)
T cd05621 41 KAEDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQDDKYLYM 120 (370)
T ss_pred CHHHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEE
Confidence 346799999999999999999994 5789999999865332222334568899999999999999999999999999999
Q ss_pred EEeccCCCChhhhhccC
Q 044615 539 VYEYLEMGSLAMNLSND 555 (571)
Q Consensus 539 v~e~~~~G~L~~~l~~~ 555 (571)
||||+++|+|.+++...
T Consensus 121 v~Ey~~gg~L~~~l~~~ 137 (370)
T cd05621 121 VMEYMPGGDLVNLMSNY 137 (370)
T ss_pred EEcCCCCCcHHHHHHhc
Confidence 99999999999999753
No 78
>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in
Probab=99.31 E-value=7.3e-12 Score=125.60 Aligned_cols=99 Identities=19% Similarity=0.173 Sum_probs=80.8
Q ss_pred CeeeccCcceEEEEE-cCCCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhcCCCCcccEEEEEEeCCeeEEEEeccCCC
Q 044615 468 HCIGNGGQGSVYKAK-LPTGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKIRHRNIVKFYGFCSHALHSFVVYEYLEMG 546 (571)
Q Consensus 468 ~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~G 546 (571)
+.||+|+||.||+++ ..+|..||+|++.............+.+|++++++++||||+++++++...+..|+||||+++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~~~~~~~lv~E~~~~~ 80 (323)
T cd05595 1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGG 80 (323)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCcceeeEEecCCEEEEEEeCCCCC
Confidence 468999999999999 5579999999997543222234567889999999999999999999999999999999999999
Q ss_pred ChhhhhccCCCccCCCHHHHhhh
Q 044615 547 SLAMNLSNDAAAEQFCWTKRMNA 569 (571)
Q Consensus 547 ~L~~~l~~~~~~~~l~w~~r~~i 569 (571)
+|.+++.... .+++.....+
T Consensus 81 ~L~~~l~~~~---~~~~~~~~~~ 100 (323)
T cd05595 81 ELFFHLSRER---VFTEERARFY 100 (323)
T ss_pred cHHHHHHHcC---CCCHHHHHHH
Confidence 9999887442 3566555444
No 79
>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity. Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....
Probab=99.31 E-value=5e-12 Score=122.54 Aligned_cols=102 Identities=36% Similarity=0.539 Sum_probs=82.4
Q ss_pred ccCeeeccCcceEEEEEcC-----CCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhcCCCCcccEEEEEEeCCeeEEEE
Q 044615 466 DGHCIGNGGQGSVYKAKLP-----TGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKIRHRNIVKFYGFCSHALHSFVVY 540 (571)
Q Consensus 466 ~~~~lg~G~~g~V~~~~~~-----~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~ 540 (571)
..+.||.|+||.||+|.+. .+..|+||.+... ......+.|.+|++.+++++||||++++|++...+..++||
T Consensus 3 ~~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~--~~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~~~~~~~lv~ 80 (259)
T PF07714_consen 3 LIKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPS--SSEEEEEEFLNEIQILRKLRHPNIVKLYGFCIENEPLFLVM 80 (259)
T ss_dssp EEEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTT--SSHHHHHHHHHHHHHHHTHSBTTBE-EEEEEESSSSEEEEE
T ss_pred EeeEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccc--cccccceeeeecccccccccccccccccccccccccccccc
Confidence 3568999999999999854 3567999999643 22334678999999999999999999999999888899999
Q ss_pred eccCCCChhhhhccCCCccCCCHHHHhhhc
Q 044615 541 EYLEMGSLAMNLSNDAAAEQFCWTKRMNAI 570 (571)
Q Consensus 541 e~~~~G~L~~~l~~~~~~~~l~w~~r~~ia 570 (571)
||+++|+|.++|+.. ....++|.++.+|+
T Consensus 81 e~~~~g~L~~~L~~~-~~~~~~~~~~~~i~ 109 (259)
T PF07714_consen 81 EYCPGGSLDDYLKSK-NKEPLSEQQRLSIA 109 (259)
T ss_dssp E--TTEBHHHHHHHT-CTTTSBHHHHHHHH
T ss_pred ccccccccccccccc-cccccccccccccc
Confidence 999999999999865 22468899888876
No 80
>KOG0532 consensus Leucine-rich repeat (LRR) protein, contains calponin homology domain [Cytoskeleton]
Probab=99.31 E-value=1e-13 Score=138.02 Aligned_cols=172 Identities=34% Similarity=0.519 Sum_probs=104.9
Q ss_pred ccceeecccccccCCCCCCCccccccccCCCCCCEEecccCcCcccccccccCCCCCCEEEcccCcCcccccccccCCCC
Q 044615 67 FEATAHFSVLAFTGQDWPLYSSIPDEIGNMKSLSDLQLSENILNGSIPLALGNLTNLVVLDLSTNKLSGSIPLSFANLTS 146 (571)
Q Consensus 67 ~l~~l~l~~n~l~~~~~~~~~~~p~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~ 146 (571)
-....||+.|++. .+|..+..+-.|+.+.|..|.+. .+|..++++..|..|||+.|+++ ..|..++.|+
T Consensus 76 dt~~aDlsrNR~~--------elp~~~~~f~~Le~liLy~n~~r-~ip~~i~~L~~lt~l~ls~NqlS-~lp~~lC~lp- 144 (722)
T KOG0532|consen 76 DTVFADLSRNRFS--------ELPEEACAFVSLESLILYHNCIR-TIPEAICNLEALTFLDLSSNQLS-HLPDGLCDLP- 144 (722)
T ss_pred chhhhhccccccc--------cCchHHHHHHHHHHHHHHhccce-ecchhhhhhhHHHHhhhccchhh-cCChhhhcCc-
Confidence 3445566666655 35666666666666666666665 56666666666666666666665 5555566554
Q ss_pred CCeeecccCcCcccCCccccCCCCCCEEEccCCCCCccCChhhhhccCCCcEEEccCCcccccCCccccCCCCCcEEeCc
Q 044615 147 LSILYLYENSLCDSIPKEIGNMNSLSILDLSSNKLNGSIPLSLANLTNSLKVLYLSSNHIVGEIPLGHGMLSSLIQLTLN 226 (571)
Q Consensus 147 L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~ 226 (571)
|+.|-+++|+++ .+|+.++.++.|..||.+.|.+. .+|..+..+.. |+.|.+..|++. .+|..+.. -.|..||++
T Consensus 145 Lkvli~sNNkl~-~lp~~ig~~~tl~~ld~s~nei~-slpsql~~l~s-lr~l~vrRn~l~-~lp~El~~-LpLi~lDfS 219 (722)
T KOG0532|consen 145 LKVLIVSNNKLT-SLPEEIGLLPTLAHLDVSKNEIQ-SLPSQLGYLTS-LRDLNVRRNHLE-DLPEELCS-LPLIRLDFS 219 (722)
T ss_pred ceeEEEecCccc-cCCcccccchhHHHhhhhhhhhh-hchHHhhhHHH-HHHHHHhhhhhh-hCCHHHhC-Cceeeeecc
Confidence 666666666664 45666666666666666666665 55666666664 666666666665 23434442 235666666
Q ss_pred cCcCcCCCChhhhCCCCCCEEEcccCccc
Q 044615 227 NNELSGQLSPELGSLIQLEYLDLSANTFH 255 (571)
Q Consensus 227 ~n~l~~~~~~~~~~l~~L~~L~L~~n~l~ 255 (571)
.|+++ .+|-.|.+|..|++|-|.+|.+.
T Consensus 220 cNkis-~iPv~fr~m~~Lq~l~LenNPLq 247 (722)
T KOG0532|consen 220 CNKIS-YLPVDFRKMRHLQVLQLENNPLQ 247 (722)
T ss_pred cCcee-ecchhhhhhhhheeeeeccCCCC
Confidence 66666 35556666666666666666664
No 81
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=99.31 E-value=6.9e-12 Score=126.27 Aligned_cols=104 Identities=21% Similarity=0.190 Sum_probs=85.7
Q ss_pred cCCCccCeeeccCcceEEEEE-cCCCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhcCCCCcccEEEEEEeCCeeEEEE
Q 044615 462 NNFDDGHCIGNGGQGSVYKAK-LPTGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKIRHRNIVKFYGFCSHALHSFVVY 540 (571)
Q Consensus 462 ~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~ 540 (571)
++|.+.+.||+|+||.||+|. ..+++.||+|++...........+.+.+|+.+++.++||||+++++++.+.+..|+||
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (330)
T cd05601 1 KDFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQLQYAFQDKDNLYLVM 80 (330)
T ss_pred CCceEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceeeEEecCCeEEEEE
Confidence 368889999999999999999 5589999999997543323334567889999999999999999999999999999999
Q ss_pred eccCCCChhhhhccCCCccCCCHHHHh
Q 044615 541 EYLEMGSLAMNLSNDAAAEQFCWTKRM 567 (571)
Q Consensus 541 e~~~~G~L~~~l~~~~~~~~l~w~~r~ 567 (571)
||+++|+|.+++.+... .+++....
T Consensus 81 e~~~~~~L~~~l~~~~~--~l~~~~~~ 105 (330)
T cd05601 81 EYQPGGDLLSLLNRYED--QFDEDMAQ 105 (330)
T ss_pred CCCCCCCHHHHHHHhcC--CCCHHHHH
Confidence 99999999999975422 34554443
No 82
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds
Probab=99.30 E-value=7.6e-12 Score=121.07 Aligned_cols=103 Identities=22% Similarity=0.372 Sum_probs=86.8
Q ss_pred cCCCccCeeeccCcceEEEEEcCCCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhcCCCCcccEEEEEEeCCeeEEEEe
Q 044615 462 NNFDDGHCIGNGGQGSVYKAKLPTGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKIRHRNIVKFYGFCSHALHSFVVYE 541 (571)
Q Consensus 462 ~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~e 541 (571)
++|...+.||+|+||.||.|....+..+|+|.+..... ..++|.+|+.++++++||||+++++++.+.+..|+|||
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~aik~~~~~~~----~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 79 (256)
T cd05113 4 KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSM----SEDEFIEEAKVMMKLSHEKLVQLYGVCTKQRPIYIVTE 79 (256)
T ss_pred HHeEEeeEecCcccceEEEEEecCCCcEEEEEcCCCcc----cHHHHHHHHHHHhcCCCCCeeeEEEEEccCCCcEEEEE
Confidence 35788899999999999999876667799999874432 23678999999999999999999999999999999999
Q ss_pred ccCCCChhhhhccCCCccCCCHHHHhhhc
Q 044615 542 YLEMGSLAMNLSNDAAAEQFCWTKRMNAI 570 (571)
Q Consensus 542 ~~~~G~L~~~l~~~~~~~~l~w~~r~~ia 570 (571)
|+++|+|.+++..... .++|.+.++|+
T Consensus 80 ~~~~~~l~~~i~~~~~--~~~~~~~~~~~ 106 (256)
T cd05113 80 YMSNGCLLNYLREHGK--RFQPSQLLEMC 106 (256)
T ss_pred cCCCCcHHHHHHhcCC--CCCHHHHHHHH
Confidence 9999999999975432 57888777765
No 83
>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.30 E-value=2.7e-12 Score=130.39 Aligned_cols=97 Identities=23% Similarity=0.358 Sum_probs=86.0
Q ss_pred ccCCCccCeeeccCcceEEEEE-cCCCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhcCCCCcccEEEEEEeCCeeEEE
Q 044615 461 TNNFDDGHCIGNGGQGSVYKAK-LPTGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKIRHRNIVKFYGFCSHALHSFVV 539 (571)
Q Consensus 461 ~~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv 539 (571)
.+.|+.++.+|+|+-|.|..|+ ..+|+.+|||++.+...........+.+||.+|+-+.|||+++++++++...++|+|
T Consensus 11 iGpwkLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~LydVwe~~~~lylv 90 (786)
T KOG0588|consen 11 IGPWKLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLYDVWENKQHLYLV 90 (786)
T ss_pred ccceeccccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHhcCCCeeeeeeeeccCceEEEE
Confidence 4568889999999999999999 679999999999876444444456788999999999999999999999999999999
Q ss_pred EeccCCCChhhhhccCCC
Q 044615 540 YEYLEMGSLAMNLSNDAA 557 (571)
Q Consensus 540 ~e~~~~G~L~~~l~~~~~ 557 (571)
.||+++|.|++++.+++.
T Consensus 91 lEyv~gGELFdylv~kG~ 108 (786)
T KOG0588|consen 91 LEYVPGGELFDYLVRKGP 108 (786)
T ss_pred EEecCCchhHHHHHhhCC
Confidence 999999999999987654
No 84
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=99.30 E-value=1e-11 Score=120.49 Aligned_cols=104 Identities=21% Similarity=0.364 Sum_probs=88.9
Q ss_pred cCCCccCeeeccCcceEEEEEcCCCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhcCCCCcccEEEEEEeCCeeEEEEe
Q 044615 462 NNFDDGHCIGNGGQGSVYKAKLPTGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKIRHRNIVKFYGFCSHALHSFVVYE 541 (571)
Q Consensus 462 ~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~e 541 (571)
++|+..+.||+|+||.||+|...+++.||+|.+..... ..++|.+|++++++++||||+++++++...+..|+|||
T Consensus 6 ~~~~~~~~lg~g~~~~v~~~~~~~~~~v~iK~~~~~~~----~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 81 (261)
T cd05068 6 TSIQLLRKLGAGQFGEVWEGLWNNTTPVAVKTLKPGTM----DPKDFLAEAQIMKKLRHPKLIQLYAVCTLEEPIYIVTE 81 (261)
T ss_pred hheeeEEEecccCCccEEEEEecCCeEEEEEeeCCCcc----cHHHHHHHHHHHHHCCCCCccceeEEEecCCCeeeeee
Confidence 45888899999999999999976778899999875432 24678999999999999999999999999999999999
Q ss_pred ccCCCChhhhhccCCCccCCCHHHHhhhc
Q 044615 542 YLEMGSLAMNLSNDAAAEQFCWTKRMNAI 570 (571)
Q Consensus 542 ~~~~G~L~~~l~~~~~~~~l~w~~r~~ia 570 (571)
|+++|+|.+++.... ...++|.+..+++
T Consensus 82 ~~~~~~L~~~~~~~~-~~~~~~~~~~~~~ 109 (261)
T cd05068 82 LMKYGSLLEYLQGGA-GRALKLPQLIDMA 109 (261)
T ss_pred cccCCcHHHHHhccC-CCCCCHHHHHHHH
Confidence 999999999997543 3457888877764
No 85
>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate
Probab=99.30 E-value=1.2e-11 Score=124.33 Aligned_cols=99 Identities=19% Similarity=0.195 Sum_probs=81.7
Q ss_pred CeeeccCcceEEEEE-cCCCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhcCCCCcccEEEEEEeCCeeEEEEeccCCC
Q 044615 468 HCIGNGGQGSVYKAK-LPTGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKIRHRNIVKFYGFCSHALHSFVVYEYLEMG 546 (571)
Q Consensus 468 ~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~G 546 (571)
+.||+|+||.||+++ ..+++.||||++.+...........+.+|+++++.++||||+++++++...+..|+||||+++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~Ey~~~g 80 (328)
T cd05593 1 KLLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLKYSFQTKDRLCFVMEYVNGG 80 (328)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCEEEEEEeCCCCC
Confidence 368999999999998 5579999999997543333334567889999999999999999999999999999999999999
Q ss_pred ChhhhhccCCCccCCCHHHHhhh
Q 044615 547 SLAMNLSNDAAAEQFCWTKRMNA 569 (571)
Q Consensus 547 ~L~~~l~~~~~~~~l~w~~r~~i 569 (571)
+|.+++.... .+++.+...+
T Consensus 81 ~L~~~l~~~~---~l~~~~~~~~ 100 (328)
T cd05593 81 ELFFHLSRER---VFSEDRTRFY 100 (328)
T ss_pred CHHHHHHhcC---CCCHHHHHHH
Confidence 9999887432 4666655544
No 86
>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a
Probab=99.30 E-value=1.5e-11 Score=119.62 Aligned_cols=109 Identities=22% Similarity=0.260 Sum_probs=89.8
Q ss_pred cCCCccCeeeccCcceEEEEEc-CCCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhcCCCCcccEEEEEEeCCeeEEEE
Q 044615 462 NNFDDGHCIGNGGQGSVYKAKL-PTGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKIRHRNIVKFYGFCSHALHSFVVY 540 (571)
Q Consensus 462 ~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~ 540 (571)
++|+..+.||+|+||.||+|.. .+|+.||+|.++..........+.+.+|++++++++|+|++++++++.+.+..++||
T Consensus 2 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 81 (267)
T cd08224 2 GNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIKYLASFIENNELNIVL 81 (267)
T ss_pred CceeeeeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEEE
Confidence 5788999999999999999995 489999999987544343344678999999999999999999999999999999999
Q ss_pred eccCCCChhhhhccCC-CccCCCHHHHhhhc
Q 044615 541 EYLEMGSLAMNLSNDA-AAEQFCWTKRMNAI 570 (571)
Q Consensus 541 e~~~~G~L~~~l~~~~-~~~~l~w~~r~~ia 570 (571)
||+++|+|.+++.+.. ....+++.+..+++
T Consensus 82 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~ 112 (267)
T cd08224 82 ELADAGDLSRMIKHFKKQKRLIPERTIWKYF 112 (267)
T ss_pred ecCCCCCHHHHHHHhcccCCCcCHHHHHHHH
Confidence 9999999999986422 22346676665543
No 87
>COG4886 Leucine-rich repeat (LRR) protein [Function unknown]
Probab=99.30 E-value=4.1e-12 Score=131.08 Aligned_cols=200 Identities=42% Similarity=0.538 Sum_probs=135.8
Q ss_pred CEEEcccCcCcccccccccCCCCCCeeecccCcCcccCCccccCCC-CCCEEEccCCCCCccCChhhhhccCCCcEEEcc
Q 044615 124 VVLDLSTNKLSGSIPLSFANLTSLSILYLYENSLCDSIPKEIGNMN-SLSILDLSSNKLNGSIPLSLANLTNSLKVLYLS 202 (571)
Q Consensus 124 ~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~-~L~~L~L~~n~l~~~~p~~~~~l~~~L~~L~l~ 202 (571)
..+++..|.+.. ....+..++.++.|++.+|.+.. ++.....+. +|+.|++++|++. .+|..+..++. |+.|+++
T Consensus 96 ~~l~~~~~~~~~-~~~~~~~~~~l~~L~l~~n~i~~-i~~~~~~~~~nL~~L~l~~N~i~-~l~~~~~~l~~-L~~L~l~ 171 (394)
T COG4886 96 PSLDLNLNRLRS-NISELLELTNLTSLDLDNNNITD-IPPLIGLLKSNLKELDLSDNKIE-SLPSPLRNLPN-LKNLDLS 171 (394)
T ss_pred ceeecccccccc-CchhhhcccceeEEecCCccccc-Cccccccchhhcccccccccchh-hhhhhhhcccc-ccccccC
Confidence 357777777632 23344556777888888888764 455555563 7888888888877 55556666665 8888888
Q ss_pred CCcccccCCccccCCCCCcEEeCccCcCcCCCChhhhCCCCCCEEEcccCccccccchhhccCCCCCEEEcCCccCccCc
Q 044615 203 SNHIVGEIPLGHGMLSSLIQLTLNNNELSGQLSPELGSLIQLEYLDLSANTFHKSIPESLSNLVKLHYLNLSNNQFSQKI 282 (571)
Q Consensus 203 ~n~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~ 282 (571)
.|++. .+|...+..+.|+.|++++|++.. +|.....+..|+.|.+++|.+. ..+..+..+.++..+.+.+|++.. .
T Consensus 172 ~N~l~-~l~~~~~~~~~L~~L~ls~N~i~~-l~~~~~~~~~L~~l~~~~N~~~-~~~~~~~~~~~l~~l~l~~n~~~~-~ 247 (394)
T COG4886 172 FNDLS-DLPKLLSNLSNLNNLDLSGNKISD-LPPEIELLSALEELDLSNNSII-ELLSSLSNLKNLSGLELSNNKLED-L 247 (394)
T ss_pred Cchhh-hhhhhhhhhhhhhheeccCCcccc-CchhhhhhhhhhhhhhcCCcce-ecchhhhhcccccccccCCceeee-c
Confidence 88876 344444466778888888888774 4554455566888888887532 345667777777777777777753 3
Q ss_pred chhhhcccCCCEEEccCCcCCcccchhccCCCCCCEEEccCCcCccccccc
Q 044615 283 PNKIEKLIHLSELDLSHNIFREEIPSQICSMQSLEKLNLSHNNLSGSIPRC 333 (571)
Q Consensus 283 ~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~ 333 (571)
+..+..++.++.|++++|.+....+ +..+.+++.|++++|.++...|..
T Consensus 248 ~~~~~~l~~l~~L~~s~n~i~~i~~--~~~~~~l~~L~~s~n~~~~~~~~~ 296 (394)
T COG4886 248 PESIGNLSNLETLDLSNNQISSISS--LGSLTNLRELDLSGNSLSNALPLI 296 (394)
T ss_pred cchhccccccceecccccccccccc--ccccCccCEEeccCccccccchhh
Confidence 5566777778888888888765433 777788888888888777655543
No 88
>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl
Probab=99.30 E-value=7.9e-12 Score=124.73 Aligned_cols=97 Identities=19% Similarity=0.213 Sum_probs=79.8
Q ss_pred eeccCcceEEEEE-cCCCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhcCCCCcccEEEEEEeCCeeEEEEeccCCCCh
Q 044615 470 IGNGGQGSVYKAK-LPTGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKIRHRNIVKFYGFCSHALHSFVVYEYLEMGSL 548 (571)
Q Consensus 470 lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~G~L 548 (571)
||+|+||.||+|. ..+++.||+|++.+...........+.+|+.++++++||||+++++++.+.+..|+||||+++|+|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L 80 (312)
T cd05585 1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKFSFQSPEKLYLVLAFINGGEL 80 (312)
T ss_pred CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcEeceeeEEecCCeEEEEEcCCCCCcH
Confidence 6999999999999 457889999999754322333456788999999999999999999999999999999999999999
Q ss_pred hhhhccCCCccCCCHHHHhhh
Q 044615 549 AMNLSNDAAAEQFCWTKRMNA 569 (571)
Q Consensus 549 ~~~l~~~~~~~~l~w~~r~~i 569 (571)
.+++...+ .+++.....+
T Consensus 81 ~~~l~~~~---~~~~~~~~~~ 98 (312)
T cd05585 81 FHHLQREG---RFDLSRARFY 98 (312)
T ss_pred HHHHHhcC---CCCHHHHHHH
Confidence 99997542 3566655544
No 89
>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase
Probab=99.30 E-value=1.6e-11 Score=119.60 Aligned_cols=108 Identities=20% Similarity=0.233 Sum_probs=87.3
Q ss_pred cCCCccCeeeccCcceEEEEE-cCCCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhcCCCCcccEEEEEEeCCeeEEEE
Q 044615 462 NNFDDGHCIGNGGQGSVYKAK-LPTGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKIRHRNIVKFYGFCSHALHSFVVY 540 (571)
Q Consensus 462 ~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~ 540 (571)
++|++.+.||+|+||.||+|+ ..+++.||||.+.............+.+|++++++++||||+++++++.+.+..++||
T Consensus 2 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 81 (267)
T cd08228 2 ANFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKYLDSFIEDNELNIVL 81 (267)
T ss_pred cceeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcceeeeeeeEEECCeEEEEE
Confidence 478999999999999999999 4588999999987544444455667999999999999999999999999999999999
Q ss_pred eccCCCChhhhhccCC-CccCCCHHHHhhh
Q 044615 541 EYLEMGSLAMNLSNDA-AAEQFCWTKRMNA 569 (571)
Q Consensus 541 e~~~~G~L~~~l~~~~-~~~~l~w~~r~~i 569 (571)
||+++|+|.+++.... ....++.....++
T Consensus 82 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~ 111 (267)
T cd08228 82 ELADAGDLSQMIKYFKKQKRLIPERTVWKY 111 (267)
T ss_pred EecCCCcHHHHHHHhhhccCCCCHHHHHHH
Confidence 9999999999886321 1223455444443
No 90
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=99.30 E-value=1.6e-11 Score=123.64 Aligned_cols=92 Identities=26% Similarity=0.383 Sum_probs=80.9
Q ss_pred cCCCccCeeeccCcceEEEEE-cCCCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhcCCCCcccEEEEEEeCCeeEEEE
Q 044615 462 NNFDDGHCIGNGGQGSVYKAK-LPTGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKIRHRNIVKFYGFCSHALHSFVVY 540 (571)
Q Consensus 462 ~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~ 540 (571)
++|+..+.||+|+||.||+++ ..++..+|+|.+.... .....+.+.+|++++++++||||+++++++...+..++||
T Consensus 5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 82 (331)
T cd06649 5 DDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEI--KPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICM 82 (331)
T ss_pred ccceEEEeecCCCCEEEEEEEECCCCcEEEEEEeeccc--CHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEe
Confidence 578999999999999999999 4578999999987542 2234567999999999999999999999999999999999
Q ss_pred eccCCCChhhhhccC
Q 044615 541 EYLEMGSLAMNLSND 555 (571)
Q Consensus 541 e~~~~G~L~~~l~~~ 555 (571)
||+++|+|.+++...
T Consensus 83 e~~~~~~L~~~l~~~ 97 (331)
T cd06649 83 EHMDGGSLDQVLKEA 97 (331)
T ss_pred ecCCCCcHHHHHHHc
Confidence 999999999999753
No 91
>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.30 E-value=1.6e-12 Score=129.10 Aligned_cols=108 Identities=21% Similarity=0.311 Sum_probs=89.3
Q ss_pred cCCCccCeeeccCcceEEEEEc-CCCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhcCCCCcccEEEEEEeCCe-eEEE
Q 044615 462 NNFDDGHCIGNGGQGSVYKAKL-PTGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKIRHRNIVKFYGFCSHALH-SFVV 539 (571)
Q Consensus 462 ~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~-~~lv 539 (571)
++|...+.+|+|+||.++.++. .++..+|+|.+....... ..++...+|+.++++++|||||.+.+.|...+. .+||
T Consensus 4 ~~Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~-~~r~~A~~E~~lis~~~hP~iv~y~ds~~~~~~~l~Iv 82 (426)
T KOG0589|consen 4 DNYEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTE-PERRSAIQEMDLLSKLLHPNIVEYKDSFEEDGQLLCIV 82 (426)
T ss_pred chhhhhhhcCccccchhhhhhhccCCceEEEEEEeccccCc-hhhHHHHHHHHHHHhccCCCeeeeccchhcCCceEEEE
Confidence 5688999999999999999984 467899999998766544 334578899999999999999999999999888 9999
Q ss_pred EeccCCCChhhhhccCCC-----ccCCCHHHHhhhc
Q 044615 540 YEYLEMGSLAMNLSNDAA-----AEQFCWTKRMNAI 570 (571)
Q Consensus 540 ~e~~~~G~L~~~l~~~~~-----~~~l~w~~r~~ia 570 (571)
|+||+||++.+.|.+..+ ..-..|..++..|
T Consensus 83 m~Y~eGg~l~~~i~~~k~~~f~E~~i~~~~~Q~~~a 118 (426)
T KOG0589|consen 83 MEYCEGGDLAQLIKEQKGVLFPEERILKWFVQILLA 118 (426)
T ss_pred EeecCCCCHHHHHHHHhhccccHHHHHHHHHHHHHH
Confidence 999999999999986542 2235677666554
No 92
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=99.30 E-value=1.6e-11 Score=123.66 Aligned_cols=92 Identities=26% Similarity=0.400 Sum_probs=80.6
Q ss_pred cCCCccCeeeccCcceEEEEEc-CCCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhcCCCCcccEEEEEEeCCeeEEEE
Q 044615 462 NNFDDGHCIGNGGQGSVYKAKL-PTGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKIRHRNIVKFYGFCSHALHSFVVY 540 (571)
Q Consensus 462 ~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~ 540 (571)
++|+..+.||+|+||.||++.. .++..+|+|.+..... ....+.+.+|++++++++|||||+++++|.+.+..|+||
T Consensus 5 ~~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~~--~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 82 (333)
T cd06650 5 DDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEIK--PAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICM 82 (333)
T ss_pred hhhheeccccCCCCEEEEEEEECCCCcEEEEEEeecccC--HHHHHHHHHHHHHHHHCCCCcccceeEEEEECCEEEEEE
Confidence 5799999999999999999994 4788999999875422 233567999999999999999999999999999999999
Q ss_pred eccCCCChhhhhccC
Q 044615 541 EYLEMGSLAMNLSND 555 (571)
Q Consensus 541 e~~~~G~L~~~l~~~ 555 (571)
||+++|+|.+++...
T Consensus 83 e~~~~~~L~~~l~~~ 97 (333)
T cd06650 83 EHMDGGSLDQVLKKA 97 (333)
T ss_pred ecCCCCcHHHHHHHc
Confidence 999999999999753
No 93
>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=99.30 E-value=1.5e-11 Score=119.64 Aligned_cols=105 Identities=22% Similarity=0.367 Sum_probs=87.5
Q ss_pred cCCCccCeeeccCcceEEEEEcC----CCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhcCCCCcccEEEEEEeCCeeE
Q 044615 462 NNFDDGHCIGNGGQGSVYKAKLP----TGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKIRHRNIVKFYGFCSHALHSF 537 (571)
Q Consensus 462 ~~~~~~~~lg~G~~g~V~~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~ 537 (571)
++|+..+.||+|+||.||+|..+ +...||||.+.... ......+|.+|+.++++++||||+++++++.+.+..+
T Consensus 4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 81 (266)
T cd05033 4 SYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGS--SDKQRLDFLTEASIMGQFDHPNIIRLEGVVTKSRPVM 81 (266)
T ss_pred HHceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCC--ChHHHHHHHHHHHHHHhCCCCCcceEeEEEecCCceE
Confidence 46888999999999999999853 24579999987543 2234567999999999999999999999999999999
Q ss_pred EEEeccCCCChhhhhccCCCccCCCHHHHhhhc
Q 044615 538 VVYEYLEMGSLAMNLSNDAAAEQFCWTKRMNAI 570 (571)
Q Consensus 538 lv~e~~~~G~L~~~l~~~~~~~~l~w~~r~~ia 570 (571)
+||||+++|+|.+++....+ .++|.+.++++
T Consensus 82 iv~e~~~~~~L~~~~~~~~~--~~~~~~~~~~~ 112 (266)
T cd05033 82 IITEYMENGSLDKFLRENDG--KFTVGQLVGML 112 (266)
T ss_pred EEEEcCCCCCHHHHHHhccC--CCCHHHHHHHH
Confidence 99999999999999975433 57888877664
No 94
>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl
Probab=99.29 E-value=1.3e-11 Score=124.03 Aligned_cols=100 Identities=16% Similarity=0.163 Sum_probs=81.6
Q ss_pred CeeeccCcceEEEEE-cCCCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhc-CCCCcccEEEEEEeCCeeEEEEeccCC
Q 044615 468 HCIGNGGQGSVYKAK-LPTGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKI-RHRNIVKFYGFCSHALHSFVVYEYLEM 545 (571)
Q Consensus 468 ~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l-~H~niv~l~~~~~~~~~~~lv~e~~~~ 545 (571)
+.||+|+||.||+|+ ..+++.||||++.+.........+.+.+|+.++.++ +||||+++++++.+.+..|+||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~~~~~lv~e~~~~ 80 (329)
T cd05588 1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTESRLFFVIEFVSG 80 (329)
T ss_pred CeEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEcCCEEEEEEeCCCC
Confidence 468999999999998 457899999999765433334456688999999888 799999999999999999999999999
Q ss_pred CChhhhhccCCCccCCCHHHHhhhc
Q 044615 546 GSLAMNLSNDAAAEQFCWTKRMNAI 570 (571)
Q Consensus 546 G~L~~~l~~~~~~~~l~w~~r~~ia 570 (571)
|+|.+++...+ .+++.....++
T Consensus 81 g~L~~~~~~~~---~l~~~~~~~~~ 102 (329)
T cd05588 81 GDLMFHMQRQR---KLPEEHARFYS 102 (329)
T ss_pred CCHHHHHHHcC---CCCHHHHHHHH
Confidence 99999886432 46666655543
No 95
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the
Probab=99.29 E-value=5e-12 Score=128.42 Aligned_cols=104 Identities=22% Similarity=0.238 Sum_probs=85.5
Q ss_pred cCCCccCeeeccCcceEEEEE-cCCCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhcCCCCcccEEEEEEeCCeeEEEE
Q 044615 462 NNFDDGHCIGNGGQGSVYKAK-LPTGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKIRHRNIVKFYGFCSHALHSFVVY 540 (571)
Q Consensus 462 ~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~ 540 (571)
++|.+.+.||+|+||.||+|+ ..+++.||||++.+.........+.+.+|++++..++||||+++++++.+.+..|+||
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (350)
T cd05573 1 DDFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKLYYSFQDEEHLYLVM 80 (350)
T ss_pred CCceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCccchhhheecCCeEEEEE
Confidence 368899999999999999999 4589999999997543222233567899999999999999999999999999999999
Q ss_pred eccCCCChhhhhccCCCccCCCHHHHhh
Q 044615 541 EYLEMGSLAMNLSNDAAAEQFCWTKRMN 568 (571)
Q Consensus 541 e~~~~G~L~~~l~~~~~~~~l~w~~r~~ 568 (571)
||+++|+|.+++...+ .+++.....
T Consensus 81 e~~~~~~L~~~l~~~~---~l~~~~~~~ 105 (350)
T cd05573 81 EYMPGGDLMNLLIRKD---VFPEETARF 105 (350)
T ss_pred cCCCCCCHHHHHHHcC---CCCHHHHHH
Confidence 9999999999997542 344444433
No 96
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=99.29 E-value=9.4e-12 Score=120.76 Aligned_cols=104 Identities=22% Similarity=0.358 Sum_probs=87.3
Q ss_pred cCCCccCeeeccCcceEEEEEcCCCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhcCCCCcccEEEEEEeCCeeEEEEe
Q 044615 462 NNFDDGHCIGNGGQGSVYKAKLPTGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKIRHRNIVKFYGFCSHALHSFVVYE 541 (571)
Q Consensus 462 ~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~e 541 (571)
++|++.+.||+|+||.||+|...++..||+|.+.... ...+.+.+|+.++++++||||+++++++.+.+..|+|||
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~~~~~~v~iK~~~~~~----~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 81 (261)
T cd05072 6 ESIKLVKKLGAGQFGEVWMGYYNNSTKVAVKTLKPGT----MSVQAFLEEANLMKTLQHDKLVRLYAVVTKEEPIYIITE 81 (261)
T ss_pred HHeEEeeecCCcCCceEEEEEecCCceEEEEEccCCc----hhHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCcEEEEe
Confidence 4688899999999999999997778889999986532 224679999999999999999999999999999999999
Q ss_pred ccCCCChhhhhccCCCccCCCHHHHhhhc
Q 044615 542 YLEMGSLAMNLSNDAAAEQFCWTKRMNAI 570 (571)
Q Consensus 542 ~~~~G~L~~~l~~~~~~~~l~w~~r~~ia 570 (571)
|+++|+|.++++... ...++|.++++++
T Consensus 82 ~~~~~~L~~~l~~~~-~~~~~~~~~~~~~ 109 (261)
T cd05072 82 YMAKGSLLDFLKSDE-GGKVLLPKLIDFS 109 (261)
T ss_pred cCCCCcHHHHHHHhc-CCCCCHHHHHHHH
Confidence 999999999997543 2356777766543
No 97
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=99.29 E-value=5.4e-12 Score=128.93 Aligned_cols=95 Identities=20% Similarity=0.207 Sum_probs=81.2
Q ss_pred ccCCCccCeeeccCcceEEEEE-cCCCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhcCCCCcccEEEEEEeCCeeEEE
Q 044615 461 TNNFDDGHCIGNGGQGSVYKAK-LPTGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKIRHRNIVKFYGFCSHALHSFVV 539 (571)
Q Consensus 461 ~~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv 539 (571)
.++|+..+.||+|+||.||+|+ ..+++.||+|++.+.........+.+.+|+.+++.++||||+++++++.+.+..|+|
T Consensus 42 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~~~~~~~~lv 121 (370)
T cd05596 42 AEDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQLHYAFQDDKYLYMV 121 (370)
T ss_pred HHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEEEEE
Confidence 4579999999999999999998 457899999999753322223345688999999999999999999999999999999
Q ss_pred EeccCCCChhhhhccC
Q 044615 540 YEYLEMGSLAMNLSND 555 (571)
Q Consensus 540 ~e~~~~G~L~~~l~~~ 555 (571)
|||+++|+|.+++.+.
T Consensus 122 ~Ey~~gg~L~~~l~~~ 137 (370)
T cd05596 122 MEYMPGGDLVNLMSNY 137 (370)
T ss_pred EcCCCCCcHHHHHHhc
Confidence 9999999999998753
No 98
>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk. Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom
Probab=99.29 E-value=7e-12 Score=121.63 Aligned_cols=107 Identities=23% Similarity=0.373 Sum_probs=90.4
Q ss_pred HccCCCccCeeeccCcceEEEEEcCCCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhcCCCCcccEEEEEEeCCeeEEE
Q 044615 460 ATNNFDDGHCIGNGGQGSVYKAKLPTGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKIRHRNIVKFYGFCSHALHSFVV 539 (571)
Q Consensus 460 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv 539 (571)
...+|+..+.||+|+||.||+|..+.+..+|+|.+..... ...+.+.+|+.+++.++||||+++++++.+.+..++|
T Consensus 4 ~~~~y~~~~~ig~g~~~~vy~~~~~~~~~~~~k~~~~~~~---~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv 80 (261)
T cd05148 4 PREEFTLERKLGSGYFGEVWEGLWKNRVRVAIKILKSDDL---LKQQDFQKEVQALKRLRHKHLISLFAVCSVGEPVYII 80 (261)
T ss_pred cHHHHHHhhhhccCCCccEEEeEecCCCcEEEEeccccch---hhHHHHHHHHHHHhcCCCcchhheeeeEecCCCeEEE
Confidence 3456889999999999999999976789999999875432 2356789999999999999999999999999999999
Q ss_pred EeccCCCChhhhhccCCCccCCCHHHHhhhc
Q 044615 540 YEYLEMGSLAMNLSNDAAAEQFCWTKRMNAI 570 (571)
Q Consensus 540 ~e~~~~G~L~~~l~~~~~~~~l~w~~r~~ia 570 (571)
|||+++|+|.+++++... ..++|.+..+++
T Consensus 81 ~e~~~~~~L~~~~~~~~~-~~~~~~~~~~~~ 110 (261)
T cd05148 81 TELMEKGSLLAFLRSPEG-QVLPVASLIDMA 110 (261)
T ss_pred EeecccCCHHHHHhcCCC-CCCCHHHHHHHH
Confidence 999999999999986432 357888776654
No 99
>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g
Probab=99.29 E-value=1.3e-11 Score=121.26 Aligned_cols=101 Identities=20% Similarity=0.203 Sum_probs=81.9
Q ss_pred eeccCcceEEEEE-cCCCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhcCCCCcccEEEEEEeCCeeEEEEeccCCCCh
Q 044615 470 IGNGGQGSVYKAK-LPTGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKIRHRNIVKFYGFCSHALHSFVVYEYLEMGSL 548 (571)
Q Consensus 470 lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~G~L 548 (571)
||+|+||+||++. ..+++.||||.+.+.........+.+..|++++++++||||+++.+++.+....|+||||+++|+|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L 80 (280)
T cd05608 1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAYAFQTKTDLCLVMTIMNGGDL 80 (280)
T ss_pred CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcEeeeeEEEcCCCeEEEEEeCCCCCCH
Confidence 6999999999998 457899999998754333333346788999999999999999999999999999999999999999
Q ss_pred hhhhccCC-CccCCCHHHHhhhc
Q 044615 549 AMNLSNDA-AAEQFCWTKRMNAI 570 (571)
Q Consensus 549 ~~~l~~~~-~~~~l~w~~r~~ia 570 (571)
.+++.... ....+++.....++
T Consensus 81 ~~~~~~~~~~~~~l~~~~~~~~~ 103 (280)
T cd05608 81 RYHIYNVDEENPGFPEPRACFYT 103 (280)
T ss_pred HHHHHhccccCCCCCHHHHHHHH
Confidence 98886422 23457777766654
No 100
>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]
Probab=99.29 E-value=2.1e-12 Score=132.42 Aligned_cols=97 Identities=28% Similarity=0.468 Sum_probs=79.5
Q ss_pred CCccCeeeccCcceEEEEE-cCCCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhcCCCCcccEEEEEEeCC------ee
Q 044615 464 FDDGHCIGNGGQGSVYKAK-LPTGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKIRHRNIVKFYGFCSHAL------HS 536 (571)
Q Consensus 464 ~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~------~~ 536 (571)
|...+.+|+||||.||+|+ ..+|+.||||.+.... .....+...+|+++|++++|||||+++++-++.. ..
T Consensus 15 W~~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~--~~r~~e~~~~EieilkKLnh~NIVk~f~iee~~~~~~~~~~~ 92 (732)
T KOG4250|consen 15 WEMDERLGKGAFGNVYRGRNKETGRLVAVKTFNKES--SLRPRERWCREIEILKKLNHPNIVKLFDIEETKFLGLVTRLP 92 (732)
T ss_pred eeehhhhcCCccceeeeecccccccchhHHhhhhhc--ccchHHHHHHHHHHHHHcCchhhhhhcccCCccccCcccccc
Confidence 4556789999999999999 6799999999998654 2344678899999999999999999999876543 46
Q ss_pred EEEEeccCCCChhhhhccCCCccCCC
Q 044615 537 FVVYEYLEMGSLAMNLSNDAAAEQFC 562 (571)
Q Consensus 537 ~lv~e~~~~G~L~~~l~~~~~~~~l~ 562 (571)
.+|||||.||||+..+.+-.....|.
T Consensus 93 vlvmEyC~gGsL~~~L~~PEN~~GLp 118 (732)
T KOG4250|consen 93 VLVMEYCSGGSLRKVLNSPENAYGLP 118 (732)
T ss_pred eEEEeecCCCcHHHHhcCcccccCCC
Confidence 79999999999999998644333343
No 101
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=99.28 E-value=8.6e-12 Score=126.02 Aligned_cols=91 Identities=24% Similarity=0.424 Sum_probs=75.5
Q ss_pred cCCCccCeeeccCcceEEEEEc------CCCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhc-CCCCcccEEEEEEeC-
Q 044615 462 NNFDDGHCIGNGGQGSVYKAKL------PTGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKI-RHRNIVKFYGFCSHA- 533 (571)
Q Consensus 462 ~~~~~~~~lg~G~~g~V~~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l-~H~niv~l~~~~~~~- 533 (571)
++|++.+.||+|+||.||+|.. .+++.||||++.... .....+.+.+|++++.++ +|||||+++++|...
T Consensus 7 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~ 84 (338)
T cd05102 7 DRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGA--TASEHKALMSELKILIHIGNHLNVVNLLGACTKPN 84 (338)
T ss_pred hHceeeeEeccCCcceEEEEEEeccCCcccchhhheecccccc--chHHHHHHHHHHHHHHHhccCcceeeEEeEecCCC
Confidence 4688999999999999999962 245689999987432 223356799999999999 899999999998764
Q ss_pred CeeEEEEeccCCCChhhhhcc
Q 044615 534 LHSFVVYEYLEMGSLAMNLSN 554 (571)
Q Consensus 534 ~~~~lv~e~~~~G~L~~~l~~ 554 (571)
...|+||||+++|+|.+++..
T Consensus 85 ~~~~lv~ey~~~g~L~~~l~~ 105 (338)
T cd05102 85 GPLMVIVEFCKYGNLSNFLRA 105 (338)
T ss_pred CceEEEEecCCCCcHHHHHHh
Confidence 458899999999999999974
No 102
>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with
Probab=99.28 E-value=1.9e-11 Score=120.35 Aligned_cols=106 Identities=19% Similarity=0.226 Sum_probs=87.3
Q ss_pred CCccCeeeccCcceEEEEE-cCCCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhcCCCCcccEEEEEEeCCeeEEEEec
Q 044615 464 FDDGHCIGNGGQGSVYKAK-LPTGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKIRHRNIVKFYGFCSHALHSFVVYEY 542 (571)
Q Consensus 464 ~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 542 (571)
|+..+.||+|+||+||+|. ..+++.||+|.+.............+.+|++++++++|+||+++.+++.+.+..++||||
T Consensus 2 ~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~ 81 (285)
T cd05632 2 FRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAYAYETKDALCLVLTI 81 (285)
T ss_pred ceEEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCceeEEEEEecCCEEEEEEEe
Confidence 6677889999999999998 457999999999765433333345678999999999999999999999999999999999
Q ss_pred cCCCChhhhhccCCCccCCCHHHHhhhc
Q 044615 543 LEMGSLAMNLSNDAAAEQFCWTKRMNAI 570 (571)
Q Consensus 543 ~~~G~L~~~l~~~~~~~~l~w~~r~~ia 570 (571)
+++|+|.+++.... ...++|.....+|
T Consensus 82 ~~~~~L~~~~~~~~-~~~~~~~~~~~~~ 108 (285)
T cd05632 82 MNGGDLKFHIYNMG-NPGFEEERALFYA 108 (285)
T ss_pred ccCccHHHHHHHhc-CCCCCHHHHHHHH
Confidence 99999999887432 2357888777664
No 103
>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.
Probab=99.28 E-value=1.1e-11 Score=120.55 Aligned_cols=109 Identities=21% Similarity=0.267 Sum_probs=90.3
Q ss_pred cCCCccCeeeccCcceEEEEE-cCCCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhcCCCCcccEEEEEEeCCeeEEEE
Q 044615 462 NNFDDGHCIGNGGQGSVYKAK-LPTGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKIRHRNIVKFYGFCSHALHSFVVY 540 (571)
Q Consensus 462 ~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~ 540 (571)
++|+..+.||+|+||.||+|. ..+++.+|||.+...........+++.+|+++++.++||||+++++++.+.+..+++|
T Consensus 2 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~ 81 (267)
T cd08229 2 ANFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVL 81 (267)
T ss_pred chhhhhhhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchhhhhheeEeCCeEEEEE
Confidence 468888999999999999999 5689999999987544444445678999999999999999999999999999999999
Q ss_pred eccCCCChhhhhccC-CCccCCCHHHHhhhc
Q 044615 541 EYLEMGSLAMNLSND-AAAEQFCWTKRMNAI 570 (571)
Q Consensus 541 e~~~~G~L~~~l~~~-~~~~~l~w~~r~~ia 570 (571)
||+++|+|.+++... .....++|.+..+++
T Consensus 82 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~ 112 (267)
T cd08229 82 ELADAGDLSRMIKHFKKQKRLIPEKTVWKYF 112 (267)
T ss_pred EecCCCCHHHHHHHhhccCCCCCHHHHHHHH
Confidence 999999999998742 223457777766554
No 104
>PLN03150 hypothetical protein; Provisional
Probab=99.28 E-value=2.6e-11 Score=130.99 Aligned_cols=113 Identities=32% Similarity=0.442 Sum_probs=102.7
Q ss_pred CCCEEEcccCccccccchhhccCCCCCEEEcCCccCccCcchhhhcccCCCEEEccCCcCCcccchhccCCCCCCEEEcc
Q 044615 243 QLEYLDLSANTFHKSIPESLSNLVKLHYLNLSNNQFSQKIPNKIEKLIHLSELDLSHNIFREEIPSQICSMQSLEKLNLS 322 (571)
Q Consensus 243 ~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls 322 (571)
.++.|+|++|.+.+.+|..+..+++|+.|+|++|.+++.+|..+..+++|+.|+|++|.+.+.+|..++.+++|+.|+|+
T Consensus 419 ~v~~L~L~~n~L~g~ip~~i~~L~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~LdLs~N~lsg~iP~~l~~L~~L~~L~Ls 498 (623)
T PLN03150 419 FIDGLGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLN 498 (623)
T ss_pred EEEEEECCCCCccccCCHHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECCCCCCCCCCchHHhcCCCCCEEECc
Confidence 37889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcCccccccccccC-CCCCEEECcCCcCcccCC
Q 044615 323 HNNLSGSIPRCFEEM-HWLSCIDISYNALQGLIP 355 (571)
Q Consensus 323 ~n~l~~~~p~~~~~l-~~L~~L~ls~N~l~~~~~ 355 (571)
+|+++|.+|..+... ..+..+++.+|...+..|
T Consensus 499 ~N~l~g~iP~~l~~~~~~~~~l~~~~N~~lc~~p 532 (623)
T PLN03150 499 GNSLSGRVPAALGGRLLHRASFNFTDNAGLCGIP 532 (623)
T ss_pred CCcccccCChHHhhccccCceEEecCCccccCCC
Confidence 999999999988764 467789999997655444
No 105
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=99.27 E-value=1.6e-11 Score=118.79 Aligned_cols=102 Identities=23% Similarity=0.351 Sum_probs=85.8
Q ss_pred CCCccCeeeccCcceEEEEEcCCCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhcCCCCcccEEEEEEeCCeeEEEEec
Q 044615 463 NFDDGHCIGNGGQGSVYKAKLPTGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKIRHRNIVKFYGFCSHALHSFVVYEY 542 (571)
Q Consensus 463 ~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 542 (571)
+|++.+.||+|+||.||+|..+++..+|+|.+..... ....|.+|++++++++||||+++++++.+.+..|+||||
T Consensus 5 ~~~~~~~lg~G~~~~v~~~~~~~~~~~~iK~~~~~~~----~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 80 (256)
T cd05059 5 ELTFLKELGSGQFGVVHLGKWRGKIDVAIKMIREGAM----SEDDFIEEAKVMMKLSHPNLVQLYGVCTKQRPIFIVTEY 80 (256)
T ss_pred HcchhhhhccCCCceEEEeEecCCccEEEEEeccCCC----CHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCceEEEEec
Confidence 4778899999999999999977777899999864322 235688999999999999999999999999999999999
Q ss_pred cCCCChhhhhccCCCccCCCHHHHhhhc
Q 044615 543 LEMGSLAMNLSNDAAAEQFCWTKRMNAI 570 (571)
Q Consensus 543 ~~~G~L~~~l~~~~~~~~l~w~~r~~ia 570 (571)
+++|+|.+++..... .++|...+.|+
T Consensus 81 ~~~~~L~~~l~~~~~--~~~~~~~~~i~ 106 (256)
T cd05059 81 MANGCLLNYLRERKG--KLGTEWLLDMC 106 (256)
T ss_pred CCCCCHHHHHHhccc--CCCHHHHHHHH
Confidence 999999999975433 56777766654
No 106
>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien
Probab=99.27 E-value=1.8e-11 Score=122.91 Aligned_cols=99 Identities=21% Similarity=0.177 Sum_probs=81.2
Q ss_pred CeeeccCcceEEEEE-cCCCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhcCCCCcccEEEEEEeCCeeEEEEeccCCC
Q 044615 468 HCIGNGGQGSVYKAK-LPTGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKIRHRNIVKFYGFCSHALHSFVVYEYLEMG 546 (571)
Q Consensus 468 ~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~G 546 (571)
+.||+|+||.||++. ..+|+.||+|++.+...........+.+|++++..++||||+++++++...+..|+||||+++|
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~~ 80 (325)
T cd05594 1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGG 80 (325)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCCceEEEEEcCCEEEEEEeCCCCC
Confidence 368999999999998 5689999999997543333334567889999999999999999999999999999999999999
Q ss_pred ChhhhhccCCCccCCCHHHHhhh
Q 044615 547 SLAMNLSNDAAAEQFCWTKRMNA 569 (571)
Q Consensus 547 ~L~~~l~~~~~~~~l~w~~r~~i 569 (571)
+|.+++.... .++|.+...|
T Consensus 81 ~L~~~l~~~~---~l~~~~~~~~ 100 (325)
T cd05594 81 ELFFHLSRER---VFSEDRARFY 100 (325)
T ss_pred cHHHHHHhcC---CCCHHHHHHH
Confidence 9999887432 4566655544
No 107
>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as
Probab=99.27 E-value=2.2e-11 Score=119.92 Aligned_cols=106 Identities=20% Similarity=0.225 Sum_probs=85.9
Q ss_pred CCccCeeeccCcceEEEEE-cCCCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhcCCCCcccEEEEEEeCCeeEEEEec
Q 044615 464 FDDGHCIGNGGQGSVYKAK-LPTGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKIRHRNIVKFYGFCSHALHSFVVYEY 542 (571)
Q Consensus 464 ~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 542 (571)
|+..+.||+|+||.||++. ..+++.||||.+.+.........+.+.+|+.++++++|++++++++.+.+.+..|+||||
T Consensus 2 f~~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~ 81 (285)
T cd05630 2 FRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTL 81 (285)
T ss_pred ceeeEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCeeeeeEEEecCCEEEEEEEe
Confidence 6777899999999999998 558999999998765433333345678999999999999999999999999999999999
Q ss_pred cCCCChhhhhccCCCccCCCHHHHhhhc
Q 044615 543 LEMGSLAMNLSNDAAAEQFCWTKRMNAI 570 (571)
Q Consensus 543 ~~~G~L~~~l~~~~~~~~l~w~~r~~ia 570 (571)
+++|+|.+++..... ..+.+.++..++
T Consensus 82 ~~g~~L~~~l~~~~~-~~l~~~~~~~~~ 108 (285)
T cd05630 82 MNGGDLKFHIYHMGE-AGFEEGRAVFYA 108 (285)
T ss_pred cCCCcHHHHHHHhcc-cCCCHHHHHHHH
Confidence 999999999864322 346666655543
No 108
>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw
Probab=99.27 E-value=1.3e-11 Score=124.37 Aligned_cols=103 Identities=19% Similarity=0.150 Sum_probs=83.0
Q ss_pred cCCCccCeeeccCcceEEEEEc-CCCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhcCCCCcccEEEEEEeCCeeEEEE
Q 044615 462 NNFDDGHCIGNGGQGSVYKAKL-PTGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKIRHRNIVKFYGFCSHALHSFVVY 540 (571)
Q Consensus 462 ~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~ 540 (571)
++|++.+.||+|+||.||+++. .+++.+|+|++.+.........+.|.+|+.++..++||||+++++++.+.+..|+||
T Consensus 1 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (332)
T cd05623 1 EDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWITTLHYAFQDENNLYLVM 80 (332)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCEEEEEE
Confidence 3688899999999999999994 468899999986432222233455889999999999999999999999999999999
Q ss_pred eccCCCChhhhhccCCCccCCCHHHH
Q 044615 541 EYLEMGSLAMNLSNDAAAEQFCWTKR 566 (571)
Q Consensus 541 e~~~~G~L~~~l~~~~~~~~l~w~~r 566 (571)
||+++|+|.+++.+... .+++...
T Consensus 81 ey~~~g~L~~~l~~~~~--~l~~~~~ 104 (332)
T cd05623 81 DYYVGGDLLTLLSKFED--RLPEDMA 104 (332)
T ss_pred eccCCCcHHHHHHHhcC--CCCHHHH
Confidence 99999999999975322 3444443
No 109
>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase. Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down
Probab=99.27 E-value=2.8e-11 Score=120.58 Aligned_cols=92 Identities=26% Similarity=0.368 Sum_probs=80.0
Q ss_pred cCCCccCeeeccCcceEEEEE-cCCCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhcCCCCcccEEEEEEeCCeeEEEE
Q 044615 462 NNFDDGHCIGNGGQGSVYKAK-LPTGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKIRHRNIVKFYGFCSHALHSFVVY 540 (571)
Q Consensus 462 ~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~ 540 (571)
++|++.+.||+|+||.||++. ..++..+|+|.+.... .....+++.+|++++.+++||||+++++++.+.+..|+||
T Consensus 1 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 78 (308)
T cd06615 1 DDFEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEI--KPAIRNQIIRELKVLHECNSPYIVGFYGAFYSDGEISICM 78 (308)
T ss_pred CCceEEeeccCCCCeEEEEEEEcCCCeEEEEEEecccc--CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCEEEEEe
Confidence 368899999999999999998 4578889999986532 2233567889999999999999999999999999999999
Q ss_pred eccCCCChhhhhccC
Q 044615 541 EYLEMGSLAMNLSND 555 (571)
Q Consensus 541 e~~~~G~L~~~l~~~ 555 (571)
||+++|+|.++++..
T Consensus 79 ey~~~~~L~~~l~~~ 93 (308)
T cd06615 79 EHMDGGSLDQVLKKA 93 (308)
T ss_pred eccCCCcHHHHHHhc
Confidence 999999999999754
No 110
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=99.27 E-value=7.8e-12 Score=127.74 Aligned_cols=100 Identities=17% Similarity=0.197 Sum_probs=83.8
Q ss_pred HHHHHccCCCccCeeeccCcceEEEEE-cCCCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhcCCCCcccEEEEEEeCC
Q 044615 456 EIIRATNNFDDGHCIGNGGQGSVYKAK-LPTGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKIRHRNIVKFYGFCSHAL 534 (571)
Q Consensus 456 ~~~~~~~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~ 534 (571)
++....++|++.+.||+|+||.||+|+ ..+++.||+|++.+.........+.+.+|+.+++.++||||+++++++.+.+
T Consensus 37 ~~~~~~~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~ 116 (371)
T cd05622 37 DLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDR 116 (371)
T ss_pred hcCcchhhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCC
Confidence 334445789999999999999999999 4578999999986533222233456889999999999999999999999999
Q ss_pred eeEEEEeccCCCChhhhhccC
Q 044615 535 HSFVVYEYLEMGSLAMNLSND 555 (571)
Q Consensus 535 ~~~lv~e~~~~G~L~~~l~~~ 555 (571)
..|+||||+++|+|.+++...
T Consensus 117 ~~~lv~Ey~~gg~L~~~~~~~ 137 (371)
T cd05622 117 YLYMVMEYMPGGDLVNLMSNY 137 (371)
T ss_pred EEEEEEcCCCCCcHHHHHHhc
Confidence 999999999999999998753
No 111
>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N. Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved
Probab=99.27 E-value=1.4e-11 Score=123.63 Aligned_cols=103 Identities=22% Similarity=0.268 Sum_probs=81.1
Q ss_pred CCccCeeeccCcceEEEEE-cCCCCEEEEEEccCCCCCchHhHHHHHHHHHHH---hhcCCCCcccEEEEEEeCCeeEEE
Q 044615 464 FDDGHCIGNGGQGSVYKAK-LPTGEIVDVKKFHSPLPDEMACQQEFLNEVNAL---TKIRHRNIVKFYGFCSHALHSFVV 539 (571)
Q Consensus 464 ~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l---~~l~H~niv~l~~~~~~~~~~~lv 539 (571)
|++.+.||+|+||.||+|. ..+++.||||++.+.........+.+.+|++++ +.++||||+++++++.+.+..|+|
T Consensus 1 y~i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~~~~~~lv 80 (324)
T cd05589 1 FRCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQTEDHVCFV 80 (324)
T ss_pred CeEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEEcCCEEEEE
Confidence 5677899999999999998 457999999999754322223345677777654 567899999999999999999999
Q ss_pred EeccCCCChhhhhccCCCccCCCHHHHhhhc
Q 044615 540 YEYLEMGSLAMNLSNDAAAEQFCWTKRMNAI 570 (571)
Q Consensus 540 ~e~~~~G~L~~~l~~~~~~~~l~w~~r~~ia 570 (571)
|||+++|+|..+++.. .++|.....++
T Consensus 81 ~E~~~~~~L~~~~~~~----~l~~~~~~~~~ 107 (324)
T cd05589 81 MEYAAGGDLMMHIHTD----VFSEPRAVFYA 107 (324)
T ss_pred EcCCCCCcHHHHhhcC----CCCHHHHHHHH
Confidence 9999999999888642 46666655543
No 112
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=99.27 E-value=1.7e-11 Score=126.07 Aligned_cols=91 Identities=26% Similarity=0.441 Sum_probs=77.1
Q ss_pred cCCCccCeeeccCcceEEEEEcC------CCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhcC-CCCcccEEEEEEeCC
Q 044615 462 NNFDDGHCIGNGGQGSVYKAKLP------TGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKIR-HRNIVKFYGFCSHAL 534 (571)
Q Consensus 462 ~~~~~~~~lg~G~~g~V~~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~-H~niv~l~~~~~~~~ 534 (571)
++|.+.+.||+|+||.||+|+.. .+..||+|++...... ...+.+.+|++++.++. |||||+++++|.+..
T Consensus 37 ~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~--~~~~~~~~E~~~l~~l~~H~niv~~~~~~~~~~ 114 (401)
T cd05107 37 DNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARS--SEKQALMSELKIMSHLGPHLNIVNLLGACTKGG 114 (401)
T ss_pred HHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCCh--hHHHHHHHHHHHHHhcCCCCCeEEEEEEEccCC
Confidence 35778899999999999999842 3467999999754322 23457899999999997 999999999999999
Q ss_pred eeEEEEeccCCCChhhhhcc
Q 044615 535 HSFVVYEYLEMGSLAMNLSN 554 (571)
Q Consensus 535 ~~~lv~e~~~~G~L~~~l~~ 554 (571)
..++||||+++|+|.++++.
T Consensus 115 ~~~iv~E~~~~g~L~~~l~~ 134 (401)
T cd05107 115 PIYIITEYCRYGDLVDYLHR 134 (401)
T ss_pred CcEEEEeccCCCcHHHHHHh
Confidence 99999999999999999974
No 113
>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul
Probab=99.27 E-value=2.4e-11 Score=118.33 Aligned_cols=105 Identities=24% Similarity=0.380 Sum_probs=86.2
Q ss_pred cCCCccCeeeccCcceEEEEEcC-C---CCEEEEEEccCCCCCchHhHHHHHHHHHHHhhcCCCCcccEEEEEEeCCeeE
Q 044615 462 NNFDDGHCIGNGGQGSVYKAKLP-T---GEIVDVKKFHSPLPDEMACQQEFLNEVNALTKIRHRNIVKFYGFCSHALHSF 537 (571)
Q Consensus 462 ~~~~~~~~lg~G~~g~V~~~~~~-~---~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~ 537 (571)
++|++.+.||+|+||.||+|... + +..+|+|.+..... ....+.|.+|+.++++++||||+++++++.+.+..|
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 81 (267)
T cd05066 4 SCIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYT--EKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSKPVM 81 (267)
T ss_pred HHeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCCC--HHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccE
Confidence 45888899999999999999842 2 33799999865432 234568999999999999999999999999999999
Q ss_pred EEEeccCCCChhhhhccCCCccCCCHHHHhhhc
Q 044615 538 VVYEYLEMGSLAMNLSNDAAAEQFCWTKRMNAI 570 (571)
Q Consensus 538 lv~e~~~~G~L~~~l~~~~~~~~l~w~~r~~ia 570 (571)
+||||+++|+|.+++..... .++|.+.++|+
T Consensus 82 lv~e~~~~~~L~~~~~~~~~--~~~~~~~~~i~ 112 (267)
T cd05066 82 IVTEYMENGSLDAFLRKHDG--QFTVIQLVGML 112 (267)
T ss_pred EEEEcCCCCCHHHHHHhcCC--CCCHHHHHHHH
Confidence 99999999999999975432 57887777654
No 114
>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]
Probab=99.27 E-value=3.2e-12 Score=127.04 Aligned_cols=99 Identities=24% Similarity=0.289 Sum_probs=85.6
Q ss_pred HHHccCCCccCeeeccCcceEEEEE-cCCCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhc-CCCCcccEEEEEEeCCe
Q 044615 458 IRATNNFDDGHCIGNGGQGSVYKAK-LPTGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKI-RHRNIVKFYGFCSHALH 535 (571)
Q Consensus 458 ~~~~~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l-~H~niv~l~~~~~~~~~ 535 (571)
.+...+|..++.||+|+|++|++|+ ..+++.||||++.+...-..+..+-+.+|-.+|.++ .||.||+++..|++...
T Consensus 69 kk~~~DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD~~s 148 (604)
T KOG0592|consen 69 KKTPNDFKFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQDEES 148 (604)
T ss_pred cCChhhcchhheeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEeecccc
Confidence 3455689999999999999999999 668999999999876544434445577888899999 99999999999999999
Q ss_pred eEEEEeccCCCChhhhhccCC
Q 044615 536 SFVVYEYLEMGSLAMNLSNDA 556 (571)
Q Consensus 536 ~~lv~e~~~~G~L~~~l~~~~ 556 (571)
+|+|+||+++|+|.++|++-+
T Consensus 149 LYFvLe~A~nGdll~~i~K~G 169 (604)
T KOG0592|consen 149 LYFVLEYAPNGDLLDLIKKYG 169 (604)
T ss_pred eEEEEEecCCCcHHHHHHHhC
Confidence 999999999999999998643
No 115
>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi
Probab=99.27 E-value=2.1e-11 Score=120.38 Aligned_cols=105 Identities=23% Similarity=0.315 Sum_probs=86.8
Q ss_pred cCCCccCeeeccCcceEEEEE-cCCCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhcCCCCcccEEEEEEeCCeeEEEE
Q 044615 462 NNFDDGHCIGNGGQGSVYKAK-LPTGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKIRHRNIVKFYGFCSHALHSFVVY 540 (571)
Q Consensus 462 ~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~ 540 (571)
++|+..+.||+|+||.||++. ..+++.||+|.+...........+.+.+|++++++++||||+++++++...+..|+||
T Consensus 1 ~~y~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 80 (290)
T cd05580 1 DDFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNLYGSFQDDSNLYLVM 80 (290)
T ss_pred CceEEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCccceeeEEEcCCeEEEEE
Confidence 368888999999999999999 4578999999987544333344577999999999999999999999999999999999
Q ss_pred eccCCCChhhhhccCCCccCCCHHHHhhh
Q 044615 541 EYLEMGSLAMNLSNDAAAEQFCWTKRMNA 569 (571)
Q Consensus 541 e~~~~G~L~~~l~~~~~~~~l~w~~r~~i 569 (571)
||+++|+|.+++.... .+++..+..+
T Consensus 81 e~~~~~~L~~~~~~~~---~l~~~~~~~~ 106 (290)
T cd05580 81 EYVPGGELFSHLRKSG---RFPEPVARFY 106 (290)
T ss_pred ecCCCCCHHHHHHHcC---CCCHHHHHHH
Confidence 9999999999997542 3555554443
No 116
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=99.27 E-value=3.2e-11 Score=117.47 Aligned_cols=102 Identities=25% Similarity=0.315 Sum_probs=84.6
Q ss_pred cCCCccCeeeccCcceEEEEE-cCCCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhcCCCCcccEEEEEEeCCeeEEEE
Q 044615 462 NNFDDGHCIGNGGQGSVYKAK-LPTGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKIRHRNIVKFYGFCSHALHSFVVY 540 (571)
Q Consensus 462 ~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~ 540 (571)
.+|++.+.||+|+||.||+|. ..+++.||+|++...... ....+.+|+.++++++||||+++++++...+..|+||
T Consensus 9 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~---~~~~~~~e~~~l~~~~h~~ii~~~~~~~~~~~~~iv~ 85 (267)
T cd06646 9 HDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPGD---DFSLIQQEIFMVKECKHCNIVAYFGSYLSREKLWICM 85 (267)
T ss_pred hhcchhheeecCCCeEEEEEEECCCCeEEEEEEEecCccc---hHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEEEEEE
Confidence 469999999999999999999 567899999998644222 2356889999999999999999999999999999999
Q ss_pred eccCCCChhhhhccCCCccCCCHHHHhhh
Q 044615 541 EYLEMGSLAMNLSNDAAAEQFCWTKRMNA 569 (571)
Q Consensus 541 e~~~~G~L~~~l~~~~~~~~l~w~~r~~i 569 (571)
||+++|+|.++++..+ .+++.....+
T Consensus 86 e~~~~~~L~~~~~~~~---~~~~~~~~~~ 111 (267)
T cd06646 86 EYCGGGSLQDIYHVTG---PLSELQIAYV 111 (267)
T ss_pred eCCCCCcHHHHHHhcC---CCCHHHHHHH
Confidence 9999999999987432 3555555443
No 117
>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.26 E-value=1.3e-11 Score=120.02 Aligned_cols=92 Identities=25% Similarity=0.370 Sum_probs=82.9
Q ss_pred ccCCCccCeeeccCcceEEEEE-cCCCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhcCCCCcccEEEEEEeCCeeEEE
Q 044615 461 TNNFDDGHCIGNGGQGSVYKAK-LPTGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKIRHRNIVKFYGFCSHALHSFVV 539 (571)
Q Consensus 461 ~~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv 539 (571)
.++|+...+||.|..++||+|+ .+.++.||||++..+.... ..+...+|+..|+.++|||||+++..|.....+|+|
T Consensus 25 ~~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~--~ld~l~kE~~~msl~~HPNIv~~~~sFvv~~~LWvV 102 (516)
T KOG0582|consen 25 AKDYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNN--DLDALRKEVQTMSLIDHPNIVTYHCSFVVDSELWVV 102 (516)
T ss_pred ccceeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhhhh--hHHHHHHHHHHhhhcCCCCcceEEEEEEecceeEEe
Confidence 4579999999999999999999 6789999999998665433 257789999999999999999999999999999999
Q ss_pred EeccCCCChhhhhcc
Q 044615 540 YEYLEMGSLAMNLSN 554 (571)
Q Consensus 540 ~e~~~~G~L~~~l~~ 554 (571)
|.||.+|++.+.++.
T Consensus 103 mpfMa~GS~ldIik~ 117 (516)
T KOG0582|consen 103 MPFMAGGSLLDIIKT 117 (516)
T ss_pred ehhhcCCcHHHHHHH
Confidence 999999999999874
No 118
>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr
Probab=99.26 E-value=2.3e-11 Score=119.22 Aligned_cols=100 Identities=20% Similarity=0.238 Sum_probs=79.9
Q ss_pred eeccCcceEEEEE-cCCCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhcCCCCcccEEEEEEeCCeeEEEEeccCCCCh
Q 044615 470 IGNGGQGSVYKAK-LPTGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKIRHRNIVKFYGFCSHALHSFVVYEYLEMGSL 548 (571)
Q Consensus 470 lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~G~L 548 (571)
||+|+||.||++. ..+|+.||+|.+...........+.+..|++++++++||||+++++++.+....|+||||+++|+|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i~~~~~~~~~~~~~~lv~e~~~g~~L 80 (277)
T cd05607 1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAYAFESKTHLCLVMSLMNGGDL 80 (277)
T ss_pred CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcEEEEEEEEecCCeEEEEEecCCCCCH
Confidence 6999999999998 457999999998653322222234566799999999999999999999999999999999999999
Q ss_pred hhhhccCCCccCCCHHHHhhhc
Q 044615 549 AMNLSNDAAAEQFCWTKRMNAI 570 (571)
Q Consensus 549 ~~~l~~~~~~~~l~w~~r~~ia 570 (571)
.+++.... ...++|...+.++
T Consensus 81 ~~~~~~~~-~~~~~~~~~~~~~ 101 (277)
T cd05607 81 KYHIYNVG-ERGLEMERVIHYS 101 (277)
T ss_pred HHHHHhcc-ccCCCHHHHHHHH
Confidence 99886433 2347777766543
No 119
>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk. Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr
Probab=99.26 E-value=2.7e-11 Score=117.47 Aligned_cols=103 Identities=20% Similarity=0.344 Sum_probs=85.8
Q ss_pred cCCCccCeeeccCcceEEEEEcCCCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhcCCCCcccEEEEEEeCCeeEEEEe
Q 044615 462 NNFDDGHCIGNGGQGSVYKAKLPTGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKIRHRNIVKFYGFCSHALHSFVVYE 541 (571)
Q Consensus 462 ~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~e 541 (571)
++|++.+.||+|+||.||+|..++++.||+|.+...... .++|.+|+.++++++||||+++++++. .+..|++||
T Consensus 6 ~~~~~~~~ig~G~~g~v~~~~~~~~~~~a~K~~~~~~~~----~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e 80 (260)
T cd05067 6 ETLKLVKKLGAGQFGEVWMGYYNGHTKVAIKSLKQGSMS----PEAFLAEANLMKQLQHPRLVRLYAVVT-QEPIYIITE 80 (260)
T ss_pred HHceeeeeeccCccceEEeeecCCCceEEEEEecCCCCc----HHHHHHHHHHHHhcCCcCeeeEEEEEc-cCCcEEEEE
Confidence 458889999999999999999878899999998754322 467899999999999999999999874 556899999
Q ss_pred ccCCCChhhhhccCCCccCCCHHHHhhhc
Q 044615 542 YLEMGSLAMNLSNDAAAEQFCWTKRMNAI 570 (571)
Q Consensus 542 ~~~~G~L~~~l~~~~~~~~l~w~~r~~ia 570 (571)
|+++|+|.+++..... ..++|.+++.++
T Consensus 81 ~~~~~~L~~~~~~~~~-~~~~~~~~~~i~ 108 (260)
T cd05067 81 YMENGSLVDFLKTPEG-IKLTINKLIDMA 108 (260)
T ss_pred cCCCCCHHHHHHhcCC-CCCCHHHHHHHH
Confidence 9999999999975432 467888777654
No 120
>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t
Probab=99.25 E-value=3.2e-11 Score=116.98 Aligned_cols=105 Identities=23% Similarity=0.399 Sum_probs=88.6
Q ss_pred ccCCCccCeeeccCcceEEEEEcCCCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhcCCCCcccEEEEEEeCCeeEEEE
Q 044615 461 TNNFDDGHCIGNGGQGSVYKAKLPTGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKIRHRNIVKFYGFCSHALHSFVVY 540 (571)
Q Consensus 461 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~ 540 (571)
.++|.+.+.||+|+||.||+|...++..||||.+...... .+++.+|+.++++++||||+++++++.+....++||
T Consensus 5 ~~~~~i~~~ig~g~~~~v~~~~~~~~~~~~vK~~~~~~~~----~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 80 (261)
T cd05034 5 RESLKLERKLGAGQFGEVWMGTWNGTTKVAVKTLKPGTMS----PEAFLQEAQIMKKLRHDKLVQLYAVCSEEEPIYIVT 80 (261)
T ss_pred hhheeeeeeeccCcceEEEEEEEcCCceEEEEEecCCccC----HHHHHHHHHHHhhCCCCCEeeeeeeeecCCceEEEE
Confidence 3568889999999999999999777788999998754322 367899999999999999999999999888999999
Q ss_pred eccCCCChhhhhccCCCccCCCHHHHhhhc
Q 044615 541 EYLEMGSLAMNLSNDAAAEQFCWTKRMNAI 570 (571)
Q Consensus 541 e~~~~G~L~~~l~~~~~~~~l~w~~r~~ia 570 (571)
||+++|+|.+++.... ...++|.++..++
T Consensus 81 e~~~~~~L~~~i~~~~-~~~~~~~~~~~~~ 109 (261)
T cd05034 81 EYMSKGSLLDFLKSGE-GKKLRLPQLVDMA 109 (261)
T ss_pred eccCCCCHHHHHhccc-cCCCCHHHHHHHH
Confidence 9999999999997643 2357887776654
No 121
>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=99.25 E-value=3.3e-12 Score=128.34 Aligned_cols=91 Identities=26% Similarity=0.473 Sum_probs=80.3
Q ss_pred ccCCCccCeeeccCcceEEEEEcC-CCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhcCCCCcccEEEEEEeCCeeEEE
Q 044615 461 TNNFDDGHCIGNGGQGSVYKAKLP-TGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKIRHRNIVKFYGFCSHALHSFVV 539 (571)
Q Consensus 461 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv 539 (571)
..+..+..++|-|.||.||.|.++ ..-.||||.++.+ ....++|..|+.+|+.++|||+|+++|+|.....+|||
T Consensus 266 RtdItMkhKLGGGQYGeVYeGvWKkyslTvAVKtLKED----tMeveEFLkEAAvMKeikHpNLVqLLGVCT~EpPFYIi 341 (1157)
T KOG4278|consen 266 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED----TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTHEPPFYII 341 (1157)
T ss_pred chheeeeeccCCCcccceeeeeeeccceeeehhhhhhc----chhHHHHHHHHHHHHhhcCccHHHHhhhhccCCCeEEE
Confidence 345667789999999999999965 5778999999754 34478999999999999999999999999999999999
Q ss_pred EeccCCCChhhhhccC
Q 044615 540 YEYLEMGSLAMNLSND 555 (571)
Q Consensus 540 ~e~~~~G~L~~~l~~~ 555 (571)
.|||.+|+|.+||++.
T Consensus 342 TEfM~yGNLLdYLRec 357 (1157)
T KOG4278|consen 342 TEFMCYGNLLDYLREC 357 (1157)
T ss_pred EecccCccHHHHHHHh
Confidence 9999999999999864
No 122
>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]
Probab=99.25 E-value=1e-12 Score=135.99 Aligned_cols=100 Identities=21% Similarity=0.425 Sum_probs=80.3
Q ss_pred CCccCeeeccCcceEEEEE-cCCC----CEEEEEEccCCCCCchHhHHHHHHHHHHHhhcCCCCcccEEEEEEeCCeeEE
Q 044615 464 FDDGHCIGNGGQGSVYKAK-LPTG----EIVDVKKFHSPLPDEMACQQEFLNEVNALTKIRHRNIVKFYGFCSHALHSFV 538 (571)
Q Consensus 464 ~~~~~~lg~G~~g~V~~~~-~~~~----~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~l 538 (571)
....++||+|+||.||+|. .+.| .+||+|++.... ..+...++..|+-+|.+++|||+++++|+|.... +.|
T Consensus 698 lkk~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t--~~~~s~e~LdeAl~masldHpnl~RLLgvc~~s~-~ql 774 (1177)
T KOG1025|consen 698 LKKDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFT--SPKASIELLDEALRMASLDHPNLLRLLGVCMLST-LQL 774 (1177)
T ss_pred hhhhceeccccceeEEeeeEecCCceecceeEEEEeeccC--CchhhHHHHHHHHHHhcCCCchHHHHhhhcccch-HHH
Confidence 3456889999999999998 4444 468999987543 2344678999999999999999999999997665 789
Q ss_pred EEeccCCCChhhhhccCCCc----cCCCHHHH
Q 044615 539 VYEYLEMGSLAMNLSNDAAA----EQFCWTKR 566 (571)
Q Consensus 539 v~e~~~~G~L~~~l~~~~~~----~~l~w~~r 566 (571)
|.+||+.|+|.+|++.++.. ..|.|...
T Consensus 775 vtq~mP~G~LlDyvr~hr~~igsq~lLnw~~Q 806 (1177)
T KOG1025|consen 775 VTQLMPLGCLLDYVREHRDNIGSQDLLNWCYQ 806 (1177)
T ss_pred HHHhcccchHHHHHHHhhccccHHHHHHHHHH
Confidence 99999999999999875442 34667544
No 123
>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=99.25 E-value=1.4e-11 Score=119.27 Aligned_cols=93 Identities=30% Similarity=0.463 Sum_probs=78.4
Q ss_pred cCCCccCeeeccCcceEEEEE-cCCCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhcCCCCcccEEEEEEeCC--eeEE
Q 044615 462 NNFDDGHCIGNGGQGSVYKAK-LPTGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKIRHRNIVKFYGFCSHAL--HSFV 538 (571)
Q Consensus 462 ~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~--~~~l 538 (571)
.+|...+.||+|+||.||.+. .++|+..|||.+.... ... .+...+|+++|.+++|||||+++|...... .+++
T Consensus 17 ~~~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~--~~~-~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~~~~~~i 93 (313)
T KOG0198|consen 17 SNWSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELED--SPT-SESLEREIRILSRLNHPNIVQYYGSSSSRENDEYNI 93 (313)
T ss_pred chhhhhccccCccceEEEEEEecCCCcceeeeeeeccc--chh-HHHHHHHHHHHHhCCCCCEEeeCCccccccCeeeEe
Confidence 457778999999999999999 4569999999987652 111 567899999999999999999999865555 6899
Q ss_pred EEeccCCCChhhhhccCCC
Q 044615 539 VYEYLEMGSLAMNLSNDAA 557 (571)
Q Consensus 539 v~e~~~~G~L~~~l~~~~~ 557 (571)
.|||+++|+|.+++.+.++
T Consensus 94 ~mEy~~~GsL~~~~~~~g~ 112 (313)
T KOG0198|consen 94 FMEYAPGGSLSDLIKRYGG 112 (313)
T ss_pred eeeccCCCcHHHHHHHcCC
Confidence 9999999999999987653
No 124
>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=99.25 E-value=1.9e-11 Score=120.29 Aligned_cols=106 Identities=25% Similarity=0.325 Sum_probs=88.0
Q ss_pred CCCccCeeeccCcceEEEEEc-CCCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhcCCCCcccEEEEEEeCCeeEEEEe
Q 044615 463 NFDDGHCIGNGGQGSVYKAKL-PTGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKIRHRNIVKFYGFCSHALHSFVVYE 541 (571)
Q Consensus 463 ~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~e 541 (571)
+|++.+.||+|+||.||++.. .++..||+|.+.... .....+.+.+|+.++++++||||+++++++...+..|+|||
T Consensus 2 ~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~--~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e 79 (286)
T cd06622 2 EIEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLEL--DESKFNQIIMELDILHKAVSPYIVDFYGAFFIEGAVYMCME 79 (286)
T ss_pred hhhhhhhhcccCCeEEEEEEEcCCCcEEEEEEeeccc--CHHHHHHHHHHHHHHHhcCCCcHHhhhhheecCCeEEEEEe
Confidence 588889999999999999995 489999999986432 22335679999999999999999999999999999999999
Q ss_pred ccCCCChhhhhccCCCccCCCHHHHhhhc
Q 044615 542 YLEMGSLAMNLSNDAAAEQFCWTKRMNAI 570 (571)
Q Consensus 542 ~~~~G~L~~~l~~~~~~~~l~w~~r~~ia 570 (571)
|+++|+|.+++........++|.....++
T Consensus 80 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 108 (286)
T cd06622 80 YMDAGSLDKLYAGGVATEGIPEDVLRRIT 108 (286)
T ss_pred ecCCCCHHHHHHhccccCCCCHHHHHHHH
Confidence 99999999998754333457777666554
No 125
>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa
Probab=99.25 E-value=4.6e-11 Score=115.49 Aligned_cols=106 Identities=18% Similarity=0.242 Sum_probs=87.7
Q ss_pred CCCccCeeeccCcceEEEEE-cCCCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhcCCCCcccEEEEEEeCCeeEEEEe
Q 044615 463 NFDDGHCIGNGGQGSVYKAK-LPTGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKIRHRNIVKFYGFCSHALHSFVVYE 541 (571)
Q Consensus 463 ~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~e 541 (571)
.|+..+.||+|+||.||.++ ..+++.+|+|.+....... ...+++.+|++++++++||||+++++++.+.+..+++||
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~-~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~~~e 79 (256)
T cd08221 1 HYIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSE-KERRDALNEIVILSLLQHPNIIAYYNHFMDDNTLLIEME 79 (256)
T ss_pred CceEeeEecccCCceEEEEEEcCCCcEEEEEEEeecccch-hHHHHHHHHHHHHHhCCCCCeeEEEeEEecCCeEEEEEE
Confidence 47888999999999999998 5678999999987543222 345678999999999999999999999999999999999
Q ss_pred ccCCCChhhhhccCCCccCCCHHHHhhhc
Q 044615 542 YLEMGSLAMNLSNDAAAEQFCWTKRMNAI 570 (571)
Q Consensus 542 ~~~~G~L~~~l~~~~~~~~l~w~~r~~ia 570 (571)
|+++|+|.+++.+.. ...+++.....++
T Consensus 80 ~~~~~~L~~~~~~~~-~~~~~~~~~~~~~ 107 (256)
T cd08221 80 YANGGTLYDKIVRQK-GQLFEEEMVLWYL 107 (256)
T ss_pred ecCCCcHHHHHHhcc-ccCCCHHHHHHHH
Confidence 999999999997543 2356776666543
No 126
>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes. Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular
Probab=99.25 E-value=3.5e-11 Score=116.06 Aligned_cols=99 Identities=24% Similarity=0.441 Sum_probs=81.6
Q ss_pred CeeeccCcceEEEEEc-CCCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhcCCCCcccEEEEEEeCCeeEEEEeccCCC
Q 044615 468 HCIGNGGQGSVYKAKL-PTGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKIRHRNIVKFYGFCSHALHSFVVYEYLEMG 546 (571)
Q Consensus 468 ~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~G 546 (571)
+.||+|+||.||+|.. .+++.||+|.+.... .......|.+|++++++++||||+++++++......|+||||+++|
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~ 78 (252)
T cd05084 1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRETL--PPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGG 78 (252)
T ss_pred CccCcccCccEEEEEEecCCceEEEEecCccC--CHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCCeEEEEeeccCC
Confidence 3589999999999984 578999999886432 2233567999999999999999999999999999999999999999
Q ss_pred ChhhhhccCCCccCCCHHHHhhhc
Q 044615 547 SLAMNLSNDAAAEQFCWTKRMNAI 570 (571)
Q Consensus 547 ~L~~~l~~~~~~~~l~w~~r~~ia 570 (571)
+|.+++...+ ..++|...+.++
T Consensus 79 ~L~~~~~~~~--~~~~~~~~~~~~ 100 (252)
T cd05084 79 DFLTFLRTEG--PRLKVKELIQMV 100 (252)
T ss_pred cHHHHHHhCC--CCCCHHHHHHHH
Confidence 9999997543 246777666543
No 127
>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc
Probab=99.24 E-value=3.5e-11 Score=116.23 Aligned_cols=106 Identities=20% Similarity=0.251 Sum_probs=88.2
Q ss_pred CCCccCeeeccCcceEEEEEc-CCCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhcCCCCcccEEEEEEeCCeeEEEEe
Q 044615 463 NFDDGHCIGNGGQGSVYKAKL-PTGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKIRHRNIVKFYGFCSHALHSFVVYE 541 (571)
Q Consensus 463 ~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~e 541 (571)
+|+..+.||+|+||.||+|.. .+++.||+|.+...... ....+.+.+|++++++++||||+++++++.+.+..|+|||
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 79 (256)
T cd08529 1 DFEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMN-RREREEAIDEARVLAKLDSSYIIRYYESFLDKGKLNIVME 79 (256)
T ss_pred CceEeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCC-HHHHHHHHHHHHHHHhcCCCCeehheeeeccCCEEEEEEE
Confidence 477888999999999999994 57899999998754332 3446789999999999999999999999999999999999
Q ss_pred ccCCCChhhhhccCCCccCCCHHHHhhhc
Q 044615 542 YLEMGSLAMNLSNDAAAEQFCWTKRMNAI 570 (571)
Q Consensus 542 ~~~~G~L~~~l~~~~~~~~l~w~~r~~ia 570 (571)
|+++++|.++++... ...++|.+..+|+
T Consensus 80 ~~~~~~L~~~l~~~~-~~~~~~~~~~~i~ 107 (256)
T cd08529 80 YAENGDLHKLLKMQR-GRPLPEDQVWRFF 107 (256)
T ss_pred eCCCCcHHHHHHHhc-CCCCCHHHHHHHH
Confidence 999999999998542 2356777666554
No 128
>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4. Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.
Probab=99.24 E-value=5e-11 Score=115.92 Aligned_cols=103 Identities=21% Similarity=0.360 Sum_probs=84.3
Q ss_pred CCCccCeeeccCcceEEEEEcCCCCEEEEEEccCCCCCc---hHhHHHHHHHHHHHhhcCCCCcccEEEEEEeCCeeEEE
Q 044615 463 NFDDGHCIGNGGQGSVYKAKLPTGEIVDVKKFHSPLPDE---MACQQEFLNEVNALTKIRHRNIVKFYGFCSHALHSFVV 539 (571)
Q Consensus 463 ~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~---~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv 539 (571)
+|...+.||+|+||.||+|...+++.+|+|.+....... ....+.+.+|++++++++|+||+++++++.+.+..++|
T Consensus 1 ~~~~~~~ig~g~~~~v~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv 80 (265)
T cd06631 1 EWTKGEVLGKGAYGTVYCGLTNQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCLDDNTISIF 80 (265)
T ss_pred CccccceEeccCCeEEEEEEEcCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEeecCCeEEEE
Confidence 477889999999999999997789999999987543221 12345689999999999999999999999999999999
Q ss_pred EeccCCCChhhhhccCCCccCCCHHHHhh
Q 044615 540 YEYLEMGSLAMNLSNDAAAEQFCWTKRMN 568 (571)
Q Consensus 540 ~e~~~~G~L~~~l~~~~~~~~l~w~~r~~ 568 (571)
|||+++|+|.+++.+.. .+.+.....
T Consensus 81 ~e~~~~~~L~~~l~~~~---~~~~~~~~~ 106 (265)
T cd06631 81 MEFVPGGSISSILNRFG---PLPEPVFCK 106 (265)
T ss_pred EecCCCCcHHHHHHhcC---CCCHHHHHH
Confidence 99999999999997543 344554433
No 129
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=99.24 E-value=2.8e-11 Score=121.51 Aligned_cols=104 Identities=16% Similarity=0.154 Sum_probs=83.2
Q ss_pred CCCccCeeeccCcceEEEEE-cCCCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhcCCC-CcccEEEEEEeCCeeEEEE
Q 044615 463 NFDDGHCIGNGGQGSVYKAK-LPTGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKIRHR-NIVKFYGFCSHALHSFVVY 540 (571)
Q Consensus 463 ~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~H~-niv~l~~~~~~~~~~~lv~ 540 (571)
+|++.+.||+|+||.||+|+ ..+++.||||++.+.........+.+..|++++..++|+ +|+++++++.+.+..|+||
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (324)
T cd05587 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVM 80 (324)
T ss_pred CceEEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEcCCEEEEEE
Confidence 47888999999999999998 457889999999754332333456788999999999775 5888999999999999999
Q ss_pred eccCCCChhhhhccCCCccCCCHHHHhhh
Q 044615 541 EYLEMGSLAMNLSNDAAAEQFCWTKRMNA 569 (571)
Q Consensus 541 e~~~~G~L~~~l~~~~~~~~l~w~~r~~i 569 (571)
||+++|+|.+++.... .+++.....+
T Consensus 81 E~~~~g~L~~~~~~~~---~~~~~~~~~~ 106 (324)
T cd05587 81 EYVNGGDLMYHIQQVG---KFKEPHAVFY 106 (324)
T ss_pred cCCCCCcHHHHHHHcC---CCCHHHHHHH
Confidence 9999999999997432 3555555544
No 130
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=99.24 E-value=3.1e-11 Score=117.60 Aligned_cols=94 Identities=24% Similarity=0.300 Sum_probs=80.4
Q ss_pred HHccCCCccCeeeccCcceEEEEE-cCCCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhcCCCCcccEEEEEEeCCeeE
Q 044615 459 RATNNFDDGHCIGNGGQGSVYKAK-LPTGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKIRHRNIVKFYGFCSHALHSF 537 (571)
Q Consensus 459 ~~~~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~ 537 (571)
.++.++.....||+|+||.||+|. ..++..||+|.+.... ....+.+.+|++++++++||||+++++++..++..+
T Consensus 5 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~---~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~ 81 (268)
T cd06624 5 YEYDENGERVVLGKGTYGIVYAARDLSTQVRIAIKEIPERD---SRYVQPLHEEIALHSYLKHRNIVQYLGSDSENGFFK 81 (268)
T ss_pred cccccCCceEEEecCCceEEEEeEecCCCcEEEEEEecCCC---HHHHHHHHHHHHHHHhcCCCCeeeeeeeeccCCEEE
Confidence 445556666789999999999999 5578899999986543 233567999999999999999999999999999999
Q ss_pred EEEeccCCCChhhhhccC
Q 044615 538 VVYEYLEMGSLAMNLSND 555 (571)
Q Consensus 538 lv~e~~~~G~L~~~l~~~ 555 (571)
+||||+++|+|.+++...
T Consensus 82 lv~e~~~~~~L~~~l~~~ 99 (268)
T cd06624 82 IFMEQVPGGSLSALLRSK 99 (268)
T ss_pred EEEecCCCCCHHHHHHHh
Confidence 999999999999999854
No 131
>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o
Probab=99.24 E-value=4e-11 Score=120.52 Aligned_cols=99 Identities=17% Similarity=0.190 Sum_probs=79.6
Q ss_pred CeeeccCcceEEEEE-cCCCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhc-CCCCcccEEEEEEeCCeeEEEEeccCC
Q 044615 468 HCIGNGGQGSVYKAK-LPTGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKI-RHRNIVKFYGFCSHALHSFVVYEYLEM 545 (571)
Q Consensus 468 ~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l-~H~niv~l~~~~~~~~~~~lv~e~~~~ 545 (571)
+.||+|+||.||+|. ..+++.||+|++.+.........+.+.+|+.++.++ +||||+++++++.+.+..|+||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~~ 80 (329)
T cd05618 1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNG 80 (329)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeCCEEEEEEeCCCC
Confidence 469999999999999 457899999999865433334456688899988776 899999999999999999999999999
Q ss_pred CChhhhhccCCCccCCCHHHHhhh
Q 044615 546 GSLAMNLSNDAAAEQFCWTKRMNA 569 (571)
Q Consensus 546 G~L~~~l~~~~~~~~l~w~~r~~i 569 (571)
|+|.+++.... .+++.....|
T Consensus 81 ~~L~~~~~~~~---~l~~~~~~~i 101 (329)
T cd05618 81 GDLMFHMQRQR---KLPEEHARFY 101 (329)
T ss_pred CCHHHHHHHcC---CCCHHHHHHH
Confidence 99998886432 3555544443
No 132
>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.24 E-value=1.7e-12 Score=126.97 Aligned_cols=100 Identities=27% Similarity=0.373 Sum_probs=81.0
Q ss_pred cCCCccCeeeccCcceEEEEE-cCCCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhcC-CCCcccEEEEEEeCC-eeEE
Q 044615 462 NNFDDGHCIGNGGQGSVYKAK-LPTGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKIR-HRNIVKFYGFCSHAL-HSFV 538 (571)
Q Consensus 462 ~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~-H~niv~l~~~~~~~~-~~~l 538 (571)
+.|...+.+|.|.||.||+|+ ..+|..||||++++..... .+. .=.||++.|++++ |||||++.+++.+++ .+|+
T Consensus 10 ~RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s~-ee~-~nLREvksL~kln~hpniikL~Evi~d~~~~L~f 87 (538)
T KOG0661|consen 10 DRYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYSW-EEC-MNLREVKSLRKLNPHPNIIKLKEVIRDNDRILYF 87 (538)
T ss_pred HHHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhccH-HHH-HHHHHHHHHHhcCCCCcchhhHHHhhccCceEee
Confidence 458888999999999999999 6689999999997654332 211 1368999999998 999999999999988 9999
Q ss_pred EEeccCCCChhhhhccCCCccCCCHHHH
Q 044615 539 VYEYLEMGSLAMNLSNDAAAEQFCWTKR 566 (571)
Q Consensus 539 v~e~~~~G~L~~~l~~~~~~~~l~w~~r 566 (571)
|||||+. +|++.+++++ ..++-..-
T Consensus 88 VfE~Md~-NLYqLmK~R~--r~fse~~i 112 (538)
T KOG0661|consen 88 VFEFMDC-NLYQLMKDRN--RLFSESDI 112 (538)
T ss_pred eHHhhhh-hHHHHHhhcC--CcCCHHHH
Confidence 9999987 9999998763 24444433
No 133
>KOG1909 consensus Ran GTPase-activating protein [RNA processing and modification; Nuclear structure; Signal transduction mechanisms]
Probab=99.24 E-value=1.9e-12 Score=122.12 Aligned_cols=247 Identities=25% Similarity=0.274 Sum_probs=144.1
Q ss_pred ccCCCCCCEEecccCcCccc----ccccccCCCCCCEEEcccCc---Ccccccc-------cccCCCCCCeeecccCcCc
Q 044615 93 IGNMKSLSDLQLSENILNGS----IPLALGNLTNLVVLDLSTNK---LSGSIPL-------SFANLTSLSILYLYENSLC 158 (571)
Q Consensus 93 ~~~l~~L~~L~L~~n~i~~~----~~~~~~~l~~L~~L~L~~n~---i~~~~~~-------~~~~l~~L~~L~L~~n~l~ 158 (571)
+-.+..++.|+|++|.+... +...+.+.++|+..++++-- ....+|. ++...+.|++|+||.|.+.
T Consensus 26 ~~~~~s~~~l~lsgnt~G~EAa~~i~~~L~~~~~L~~v~~sd~ftGR~~~Ei~e~L~~l~~aL~~~~~L~~ldLSDNA~G 105 (382)
T KOG1909|consen 26 LEPMDSLTKLDLSGNTFGTEAARAIAKVLASKKELREVNLSDMFTGRLKDEIPEALKMLSKALLGCPKLQKLDLSDNAFG 105 (382)
T ss_pred hcccCceEEEeccCCchhHHHHHHHHHHHhhcccceeeehHhhhcCCcHHHHHHHHHHHHHHHhcCCceeEeeccccccC
Confidence 44567788888888877532 33455666777777776532 1112232 3445667888888888876
Q ss_pred ccCCcc----ccCCCCCCEEEccCCCCCccCChhhhhccCCCcEEEccCCcccccCCccccCCCCCcEEeCccCcCcCCC
Q 044615 159 DSIPKE----IGNMNSLSILDLSSNKLNGSIPLSLANLTNSLKVLYLSSNHIVGEIPLGHGMLSSLIQLTLNNNELSGQL 234 (571)
Q Consensus 159 ~~~~~~----l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~ 234 (571)
...+.. +.++..|++|.|.+|.+.-.-...+++ .|..|. .+. ..+.-+.|+.+....|++....
T Consensus 106 ~~g~~~l~~ll~s~~~L~eL~L~N~Glg~~ag~~l~~---al~~l~--~~k-------k~~~~~~Lrv~i~~rNrlen~g 173 (382)
T KOG1909|consen 106 PKGIRGLEELLSSCTDLEELYLNNCGLGPEAGGRLGR---ALFELA--VNK-------KAASKPKLRVFICGRNRLENGG 173 (382)
T ss_pred ccchHHHHHHHHhccCHHHHhhhcCCCChhHHHHHHH---HHHHHH--HHh-------ccCCCcceEEEEeecccccccc
Confidence 444433 345777888888877765211111111 122211 111 1122345666666666654322
Q ss_pred ----ChhhhCCCCCCEEEcccCccccc----cchhhccCCCCCEEEcCCccCccCc----chhhhcccCCCEEEccCCcC
Q 044615 235 ----SPELGSLIQLEYLDLSANTFHKS----IPESLSNLVKLHYLNLSNNQFSQKI----PNKIEKLIHLSELDLSHNIF 302 (571)
Q Consensus 235 ----~~~~~~l~~L~~L~L~~n~l~~~----~~~~l~~l~~L~~L~Ls~n~l~~~~----~~~~~~l~~L~~L~Ls~n~l 302 (571)
...|...+.|+.+.+..|.+... +...+..+++|+.|||.+|-++... ...+..+++|++|++++|.+
T Consensus 174 a~~~A~~~~~~~~leevr~~qN~I~~eG~~al~eal~~~~~LevLdl~DNtft~egs~~LakaL~s~~~L~El~l~dcll 253 (382)
T KOG1909|consen 174 ATALAEAFQSHPTLEEVRLSQNGIRPEGVTALAEALEHCPHLEVLDLRDNTFTLEGSVALAKALSSWPHLRELNLGDCLL 253 (382)
T ss_pred HHHHHHHHHhccccceEEEecccccCchhHHHHHHHHhCCcceeeecccchhhhHHHHHHHHHhcccchheeeccccccc
Confidence 22345566777777777765321 2344667777777777777775432 33455566777777777776
Q ss_pred Ccccchhc-----cCCCCCCEEEccCCcCcc----ccccccccCCCCCEEECcCCcCc
Q 044615 303 REEIPSQI-----CSMQSLEKLNLSHNNLSG----SIPRCFEEMHWLSCIDISYNALQ 351 (571)
Q Consensus 303 ~~~~~~~~-----~~l~~L~~L~Ls~n~l~~----~~p~~~~~l~~L~~L~ls~N~l~ 351 (571)
.......+ ...|+|+.|.+.+|.++. .+..+....+.|..|+|++|.+.
T Consensus 254 ~~~Ga~a~~~al~~~~p~L~vl~l~gNeIt~da~~~la~~~~ek~dL~kLnLngN~l~ 311 (382)
T KOG1909|consen 254 ENEGAIAFVDALKESAPSLEVLELAGNEITRDAALALAACMAEKPDLEKLNLNGNRLG 311 (382)
T ss_pred ccccHHHHHHHHhccCCCCceeccCcchhHHHHHHHHHHHHhcchhhHHhcCCccccc
Confidence 54433222 346788888888887763 23345566788888888888873
No 134
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=99.23 E-value=2e-11 Score=124.94 Aligned_cols=93 Identities=27% Similarity=0.434 Sum_probs=78.3
Q ss_pred HccCCCccCeeeccCcceEEEEEc-C-----CCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhc-CCCCcccEEEEEEe
Q 044615 460 ATNNFDDGHCIGNGGQGSVYKAKL-P-----TGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKI-RHRNIVKFYGFCSH 532 (571)
Q Consensus 460 ~~~~~~~~~~lg~G~~g~V~~~~~-~-----~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l-~H~niv~l~~~~~~ 532 (571)
..++|++.+.||+|+||.||+|.. . ++..||||++...... ...+.+.+|+++++.+ +|||||+++++|.+
T Consensus 36 ~~~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~E~~il~~l~~h~nIv~~~~~~~~ 113 (374)
T cd05106 36 PRDNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHT--DEREALMSELKILSHLGQHKNIVNLLGACTH 113 (374)
T ss_pred cHHHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCCH--HHHHHHHHHHHHHHhhccCCceeeEeeEecC
Confidence 345689999999999999999872 2 3357999999754322 3356789999999999 89999999999999
Q ss_pred CCeeEEEEeccCCCChhhhhcc
Q 044615 533 ALHSFVVYEYLEMGSLAMNLSN 554 (571)
Q Consensus 533 ~~~~~lv~e~~~~G~L~~~l~~ 554 (571)
.+..|+||||+++|+|.++++.
T Consensus 114 ~~~~~lv~ey~~~g~L~~~l~~ 135 (374)
T cd05106 114 GGPVLVITEYCCYGDLLNFLRK 135 (374)
T ss_pred CCCeEEeHhhccCCcHHHHHHh
Confidence 9999999999999999999864
No 135
>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.23 E-value=8.9e-12 Score=122.74 Aligned_cols=96 Identities=23% Similarity=0.313 Sum_probs=84.0
Q ss_pred cCCCccCeeeccCcceEEEEEc-CCCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhcCCCCcccEEEEEEeCCeeEEEE
Q 044615 462 NNFDDGHCIGNGGQGSVYKAKL-PTGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKIRHRNIVKFYGFCSHALHSFVVY 540 (571)
Q Consensus 462 ~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~ 540 (571)
+-|+..+.||+|.|++|..|++ =+|..||||++++.+.+. ....++.+|+++|+-++|||||++|++..++..+|+|+
T Consensus 18 GLYDLekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~-~st~hlfqEVRCMKLVQHpNiVRLYEViDTQTKlyLiL 96 (864)
T KOG4717|consen 18 GLYDLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDT-LSTGHLFQEVRCMKLVQHPNIVRLYEVIDTQTKLYLIL 96 (864)
T ss_pred eeehhhhhhcCCceehhhhhhhhcccceeEEEEecccccch-hhhhHHHHHHHHHHHhcCcCeeeeeehhcccceEEEEE
Confidence 3477888999999999999983 489999999999877654 33567889999999999999999999999999999999
Q ss_pred eccCCCChhhhhccCCCc
Q 044615 541 EYLEMGSLAMNLSNDAAA 558 (571)
Q Consensus 541 e~~~~G~L~~~l~~~~~~ 558 (571)
|.=.+|||+|||-.++.+
T Consensus 97 ELGD~GDl~DyImKHe~G 114 (864)
T KOG4717|consen 97 ELGDGGDLFDYIMKHEEG 114 (864)
T ss_pred EecCCchHHHHHHhhhcc
Confidence 999999999999866543
No 136
>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=99.23 E-value=1.7e-11 Score=119.95 Aligned_cols=90 Identities=22% Similarity=0.318 Sum_probs=75.1
Q ss_pred HccCCCccCeeeccCcceEEEEE-cCCCCEEEEEEccCCCCCc-----------hHhHHHHHHHHHHHhhcCCCCcccEE
Q 044615 460 ATNNFDDGHCIGNGGQGSVYKAK-LPTGEIVDVKKFHSPLPDE-----------MACQQEFLNEVNALTKIRHRNIVKFY 527 (571)
Q Consensus 460 ~~~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~-----------~~~~~~~~~Ei~~l~~l~H~niv~l~ 527 (571)
..+.|++.+.||+|.||.|.+|+ ..+++.||||++.+..... ....+.+.+||.+|++++|||||+++
T Consensus 95 ~lNqy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nVV~Li 174 (576)
T KOG0585|consen 95 QLNQYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNVVKLI 174 (576)
T ss_pred ehhheehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCeeEEE
Confidence 34679999999999999999999 5689999999997643211 01245789999999999999999999
Q ss_pred EEEEeC--CeeEEEEeccCCCChh
Q 044615 528 GFCSHA--LHSFVVYEYLEMGSLA 549 (571)
Q Consensus 528 ~~~~~~--~~~~lv~e~~~~G~L~ 549 (571)
++..++ +.+|||+|||..|.+.
T Consensus 175 EvLDDP~s~~~YlVley~s~G~v~ 198 (576)
T KOG0585|consen 175 EVLDDPESDKLYLVLEYCSKGEVK 198 (576)
T ss_pred EeecCcccCceEEEEEeccCCccc
Confidence 999775 5799999999999864
No 137
>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr
Probab=99.23 E-value=4.4e-11 Score=116.59 Aligned_cols=105 Identities=23% Similarity=0.413 Sum_probs=86.4
Q ss_pred cCCCccCeeeccCcceEEEEEcC-CC---CEEEEEEccCCCCCchHhHHHHHHHHHHHhhcCCCCcccEEEEEEeCCeeE
Q 044615 462 NNFDDGHCIGNGGQGSVYKAKLP-TG---EIVDVKKFHSPLPDEMACQQEFLNEVNALTKIRHRNIVKFYGFCSHALHSF 537 (571)
Q Consensus 462 ~~~~~~~~lg~G~~g~V~~~~~~-~~---~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~ 537 (571)
++|++.+.||+|+||.||+|..+ ++ ..||||.+.... .....++|..|+.++++++||||+++++++.+....+
T Consensus 4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~ 81 (269)
T cd05065 4 SCVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGY--TEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSRPVM 81 (269)
T ss_pred HHeEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCC--CHHHHHHHHHHHHHHHhCCCcCcceEEEEECCCCceE
Confidence 35778899999999999999843 33 369999987542 2344678999999999999999999999999999999
Q ss_pred EEEeccCCCChhhhhccCCCccCCCHHHHhhhc
Q 044615 538 VVYEYLEMGSLAMNLSNDAAAEQFCWTKRMNAI 570 (571)
Q Consensus 538 lv~e~~~~G~L~~~l~~~~~~~~l~w~~r~~ia 570 (571)
+||||+++|+|.+++....+ .++|.+++.++
T Consensus 82 lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~i~ 112 (269)
T cd05065 82 IITEFMENGALDSFLRQNDG--QFTVIQLVGML 112 (269)
T ss_pred EEEecCCCCcHHHHHhhCCC--CCCHHHHHHHH
Confidence 99999999999999975432 57888777654
No 138
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=99.23 E-value=3.5e-11 Score=118.38 Aligned_cols=103 Identities=23% Similarity=0.351 Sum_probs=85.2
Q ss_pred cCCCccCeeeccCcceEEEEE-cCCCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhcCCCCcccEEEEEEeCCeeEEEE
Q 044615 462 NNFDDGHCIGNGGQGSVYKAK-LPTGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKIRHRNIVKFYGFCSHALHSFVVY 540 (571)
Q Consensus 462 ~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~ 540 (571)
++|+..+.||+|+||+||++. .++++.||+|++..... ....+.+.+|+++++.++||||+++++++...+..|+||
T Consensus 5 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~--~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 82 (284)
T cd06620 5 EDLETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGAK--SSVRKQILRELQIMHECRSPYIVSFYGAFLNENNICMCM 82 (284)
T ss_pred HHHHHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecCc--chHHHHHHHHHHHHHHcCCCCcceEeeeEecCCEEEEEE
Confidence 457888999999999999999 55789999998865422 233577999999999999999999999999999999999
Q ss_pred eccCCCChhhhhccCCCccCCCHHHHhhh
Q 044615 541 EYLEMGSLAMNLSNDAAAEQFCWTKRMNA 569 (571)
Q Consensus 541 e~~~~G~L~~~l~~~~~~~~l~w~~r~~i 569 (571)
||+++|+|.+++...+ .++|....++
T Consensus 83 e~~~~~~L~~~~~~~~---~~~~~~~~~~ 108 (284)
T cd06620 83 EFMDCGSLDRIYKKGG---PIPVEILGKI 108 (284)
T ss_pred ecCCCCCHHHHHHhcc---CCCHHHHHHH
Confidence 9999999999987532 3556555443
No 139
>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their
Probab=99.23 E-value=4.2e-11 Score=116.59 Aligned_cols=104 Identities=21% Similarity=0.345 Sum_probs=85.8
Q ss_pred CCCccCeeeccCcceEEEEE-cCCCCEEEEEEccCCCCCc---hHhHHHHHHHHHHHhhcCCCCcccEEEEEEeCCeeEE
Q 044615 463 NFDDGHCIGNGGQGSVYKAK-LPTGEIVDVKKFHSPLPDE---MACQQEFLNEVNALTKIRHRNIVKFYGFCSHALHSFV 538 (571)
Q Consensus 463 ~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~---~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~l 538 (571)
+|+..+.||+|+||.||+|. ..+++.||+|.+....... ....+.+.+|++++++++||||+++++++.+.+..++
T Consensus 1 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~ 80 (268)
T cd06630 1 EWLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATCEDSHFNL 80 (268)
T ss_pred CccccceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhceeccCCeEEE
Confidence 47888999999999999998 5689999999987543221 1235679999999999999999999999999999999
Q ss_pred EEeccCCCChhhhhccCCCccCCCHHHHhhh
Q 044615 539 VYEYLEMGSLAMNLSNDAAAEQFCWTKRMNA 569 (571)
Q Consensus 539 v~e~~~~G~L~~~l~~~~~~~~l~w~~r~~i 569 (571)
||||+++|+|.+++.+.+ ++++....++
T Consensus 81 v~e~~~~~~L~~~l~~~~---~~~~~~~~~~ 108 (268)
T cd06630 81 FVEWMAGGSVSHLLSKYG---AFKEAVIINY 108 (268)
T ss_pred EEeccCCCcHHHHHHHhC---CCCHHHHHHH
Confidence 999999999999997532 4566655544
No 140
>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a
Probab=99.22 E-value=3.3e-11 Score=120.82 Aligned_cols=105 Identities=16% Similarity=0.157 Sum_probs=83.8
Q ss_pred CCCccCeeeccCcceEEEEE-cCCCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhcC-CCCcccEEEEEEeCCeeEEEE
Q 044615 463 NFDDGHCIGNGGQGSVYKAK-LPTGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKIR-HRNIVKFYGFCSHALHSFVVY 540 (571)
Q Consensus 463 ~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~-H~niv~l~~~~~~~~~~~lv~ 540 (571)
+|+..+.||+|+||.||+|+ ..+|+.||+|++.+.........+.+..|+.++..+. ||+|+++++++.+.+..|+||
T Consensus 1 ~f~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (323)
T cd05615 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQTVDRLYFVM 80 (323)
T ss_pred CceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEecCCEEEEEE
Confidence 47778999999999999998 5579999999997543222233566888999988885 577888999999999999999
Q ss_pred eccCCCChhhhhccCCCccCCCHHHHhhhc
Q 044615 541 EYLEMGSLAMNLSNDAAAEQFCWTKRMNAI 570 (571)
Q Consensus 541 e~~~~G~L~~~l~~~~~~~~l~w~~r~~ia 570 (571)
||+++|+|.+++...+ .+++.+...||
T Consensus 81 Ey~~~g~L~~~i~~~~---~l~~~~~~~i~ 107 (323)
T cd05615 81 EYVNGGDLMYHIQQVG---KFKEPQAVFYA 107 (323)
T ss_pred cCCCCCcHHHHHHHcC---CCCHHHHHHHH
Confidence 9999999999987432 46677666654
No 141
>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer. Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c
Probab=99.22 E-value=6.3e-11 Score=114.10 Aligned_cols=99 Identities=26% Similarity=0.419 Sum_probs=82.5
Q ss_pred CeeeccCcceEEEEEcCCCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhcCCCCcccEEEEEEeCCeeEEEEeccCCCC
Q 044615 468 HCIGNGGQGSVYKAKLPTGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKIRHRNIVKFYGFCSHALHSFVVYEYLEMGS 547 (571)
Q Consensus 468 ~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~G~ 547 (571)
+.||+|+||.||+|..+++..+|+|.+..... ......|.+|++++++++||||+++++++...+..++||||+++|+
T Consensus 1 ~~ig~g~~g~vy~~~~~~~~~~a~K~~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~ 78 (250)
T cd05085 1 ELLGKGNFGEVFKGTLKDKTPVAVKTCKEDLP--QELKIKFLSEARILKQYDHPNIVKLIGVCTQRQPIYIVMELVPGGD 78 (250)
T ss_pred CccCCCCCceEEEEEecCCcEEEEEecCCcCC--HHHHHHHHHHHHHHHhCCCCCcCeEEEEEecCCccEEEEECCCCCc
Confidence 36899999999999977889999999875432 2334578999999999999999999999999999999999999999
Q ss_pred hhhhhccCCCccCCCHHHHhhhc
Q 044615 548 LAMNLSNDAAAEQFCWTKRMNAI 570 (571)
Q Consensus 548 L~~~l~~~~~~~~l~w~~r~~ia 570 (571)
|.+++..... .++|..++.++
T Consensus 79 L~~~~~~~~~--~~~~~~~~~~~ 99 (250)
T cd05085 79 FLSFLRKKKD--ELKTKQLVKFA 99 (250)
T ss_pred HHHHHHhcCC--CCCHHHHHHHH
Confidence 9999875432 46777776653
No 142
>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1. Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.
Probab=99.22 E-value=2e-11 Score=118.29 Aligned_cols=104 Identities=21% Similarity=0.245 Sum_probs=86.7
Q ss_pred CCCccCeeeccCcceEEEEEc-CCCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhcCCCCcccEEEEEEeCCeeEEEEe
Q 044615 463 NFDDGHCIGNGGQGSVYKAKL-PTGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKIRHRNIVKFYGFCSHALHSFVVYE 541 (571)
Q Consensus 463 ~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~e 541 (571)
+|+..+.||.|+||.||+|.. .++..||+|.+.+.........+.+.+|++++++++||||+++++++.++...|+|||
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 80 (258)
T cd05578 1 HFELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVNLWYSFQDEENMYLVVD 80 (258)
T ss_pred CceEEEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCChHHHHHhhcCCCeEEEEEe
Confidence 478889999999999999994 4789999999976543333446789999999999999999999999999999999999
Q ss_pred ccCCCChhhhhccCCCccCCCHHHHhhh
Q 044615 542 YLEMGSLAMNLSNDAAAEQFCWTKRMNA 569 (571)
Q Consensus 542 ~~~~G~L~~~l~~~~~~~~l~w~~r~~i 569 (571)
|+++++|.+++... ..+++.....|
T Consensus 81 ~~~~~~L~~~l~~~---~~l~~~~~~~~ 105 (258)
T cd05578 81 LLLGGDLRYHLSQK---VKFSEEQVKFW 105 (258)
T ss_pred CCCCCCHHHHHHhc---CCcCHHHHHHH
Confidence 99999999999754 24555555544
No 143
>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to
Probab=99.22 E-value=3.9e-11 Score=120.27 Aligned_cols=99 Identities=19% Similarity=0.221 Sum_probs=79.0
Q ss_pred CeeeccCcceEEEEEc-CCCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhc-CCCCcccEEEEEEeCCeeEEEEeccCC
Q 044615 468 HCIGNGGQGSVYKAKL-PTGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKI-RHRNIVKFYGFCSHALHSFVVYEYLEM 545 (571)
Q Consensus 468 ~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l-~H~niv~l~~~~~~~~~~~lv~e~~~~ 545 (571)
+.||+|+||.||+|+. .+++.||||++.+.........+.+..|++++..+ +||||+++++++.+.+..|+||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~ 80 (321)
T cd05591 1 KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQTKDRLFFVMEYVNG 80 (321)
T ss_pred CccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCeEEEEEeCCCC
Confidence 3689999999999984 57899999999754332233456678899998865 899999999999999999999999999
Q ss_pred CChhhhhccCCCccCCCHHHHhhh
Q 044615 546 GSLAMNLSNDAAAEQFCWTKRMNA 569 (571)
Q Consensus 546 G~L~~~l~~~~~~~~l~w~~r~~i 569 (571)
|+|.+++.... .+++.....+
T Consensus 81 ~~L~~~l~~~~---~~~~~~~~~~ 101 (321)
T cd05591 81 GDLMFQIQRSR---KFDEPRSRFY 101 (321)
T ss_pred CcHHHHHHHcC---CCCHHHHHHH
Confidence 99999987442 3556555443
No 144
>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C. Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re
Probab=99.22 E-value=3.9e-11 Score=120.10 Aligned_cols=100 Identities=20% Similarity=0.241 Sum_probs=80.5
Q ss_pred CeeeccCcceEEEEEc-CCCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhc-CCCCcccEEEEEEeCCeeEEEEeccCC
Q 044615 468 HCIGNGGQGSVYKAKL-PTGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKI-RHRNIVKFYGFCSHALHSFVVYEYLEM 545 (571)
Q Consensus 468 ~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l-~H~niv~l~~~~~~~~~~~lv~e~~~~ 545 (571)
+.||+|+||.||+|.. .+++.||||++.+...........+.+|++++..+ +||||+++++++.+.+..|+||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (318)
T cd05570 1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQTKDRLFFVMEYVNG 80 (318)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 4689999999999984 57889999999754322223356678899998887 799999999999999999999999999
Q ss_pred CChhhhhccCCCccCCCHHHHhhhc
Q 044615 546 GSLAMNLSNDAAAEQFCWTKRMNAI 570 (571)
Q Consensus 546 G~L~~~l~~~~~~~~l~w~~r~~ia 570 (571)
|+|.+++.+.+ .++|.....|+
T Consensus 81 ~~L~~~~~~~~---~l~~~~~~~~~ 102 (318)
T cd05570 81 GDLMFHIQRSG---RFDEPRARFYA 102 (318)
T ss_pred CCHHHHHHHcC---CCCHHHHHHHH
Confidence 99999887542 46676665543
No 145
>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha. Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype
Probab=99.22 E-value=5.4e-11 Score=119.58 Aligned_cols=103 Identities=19% Similarity=0.186 Sum_probs=82.9
Q ss_pred ccCeeecc--CcceEEEEE-cCCCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhcCCCCcccEEEEEEeCCeeEEEEec
Q 044615 466 DGHCIGNG--GQGSVYKAK-LPTGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKIRHRNIVKFYGFCSHALHSFVVYEY 542 (571)
Q Consensus 466 ~~~~lg~G--~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 542 (571)
..++||+| +|++||++. ..+|+.||+|++....... ...+.+.+|+++++.++|||||+++++|.+++..|+||||
T Consensus 2 ~~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~~-~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~ 80 (327)
T cd08227 2 LLTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEACTN-EMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSF 80 (327)
T ss_pred hhhhccccccceEEEEEEeecccCcEEEEEEechhhccH-HHHHHHHHHHHHHHhcCCCCeeeEEEEEEECCEEEEEEec
Confidence 35679999 688999998 5689999999997543322 3345678899999999999999999999999999999999
Q ss_pred cCCCChhhhhccCCCccCCCHHHHhhhc
Q 044615 543 LEMGSLAMNLSNDAAAEQFCWTKRMNAI 570 (571)
Q Consensus 543 ~~~G~L~~~l~~~~~~~~l~w~~r~~ia 570 (571)
+++|+|.+++..... ..++|.....|+
T Consensus 81 ~~~~~l~~~~~~~~~-~~l~~~~~~~i~ 107 (327)
T cd08227 81 MAYGSAKDLICTHFM-DGMSELAIAYIL 107 (327)
T ss_pred cCCCcHHHHHHhhcc-CCCCHHHHHHHH
Confidence 999999999964322 246777666554
No 146
>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in
Probab=99.22 E-value=4.3e-11 Score=119.60 Aligned_cols=99 Identities=20% Similarity=0.262 Sum_probs=77.7
Q ss_pred CeeeccCcceEEEEEc-CCCCEEEEEEccCCCCCchHhHHHHHHHHHHHhh-cCCCCcccEEEEEEeCCeeEEEEeccCC
Q 044615 468 HCIGNGGQGSVYKAKL-PTGEIVDVKKFHSPLPDEMACQQEFLNEVNALTK-IRHRNIVKFYGFCSHALHSFVVYEYLEM 545 (571)
Q Consensus 468 ~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~-l~H~niv~l~~~~~~~~~~~lv~e~~~~ 545 (571)
+.||+|+||.||+|+. .+++.||||+++..........+.+..|..++.. .+||||+++++++.+.+..|+||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ey~~~ 80 (316)
T cd05619 1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTKENLFFVMEYLNG 80 (316)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEeCCEEEEEEeCCCC
Confidence 4689999999999994 5788999999975432212234557778888876 5999999999999999999999999999
Q ss_pred CChhhhhccCCCccCCCHHHHhhh
Q 044615 546 GSLAMNLSNDAAAEQFCWTKRMNA 569 (571)
Q Consensus 546 G~L~~~l~~~~~~~~l~w~~r~~i 569 (571)
|+|.+++.... .+++.+...+
T Consensus 81 g~L~~~l~~~~---~~~~~~~~~~ 101 (316)
T cd05619 81 GDLMFHIQSCH---KFDLPRATFY 101 (316)
T ss_pred CcHHHHHHHcC---CCCHHHHHHH
Confidence 99999997532 3566555544
No 147
>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a
Probab=99.22 E-value=5.9e-11 Score=118.06 Aligned_cols=103 Identities=23% Similarity=0.203 Sum_probs=85.6
Q ss_pred CCCccCeeeccCcceEEEEE-cCCCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhcCCCCcccEEEEEEeCCeeEEEEe
Q 044615 463 NFDDGHCIGNGGQGSVYKAK-LPTGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKIRHRNIVKFYGFCSHALHSFVVYE 541 (571)
Q Consensus 463 ~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~e 541 (571)
+|+..+.||+|+||.||++. ..+++.||+|.+...........+.+.+|+++++.++||||+++++.+.+++..|+|||
T Consensus 2 ~y~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e 81 (305)
T cd05609 2 DFETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPFVVSMFCSFETKRHLCMVME 81 (305)
T ss_pred CceEeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEecCCEEEEEEe
Confidence 68889999999999999999 45788999999876533333345678899999999999999999999999999999999
Q ss_pred ccCCCChhhhhccCCCccCCCHHHHhh
Q 044615 542 YLEMGSLAMNLSNDAAAEQFCWTKRMN 568 (571)
Q Consensus 542 ~~~~G~L~~~l~~~~~~~~l~w~~r~~ 568 (571)
|+++|+|.+++...+ .+.|.....
T Consensus 82 ~~~g~~L~~~l~~~~---~~~~~~~~~ 105 (305)
T cd05609 82 YVEGGDCATLLKNIG---ALPVDMARM 105 (305)
T ss_pred cCCCCcHHHHHHHcC---CCCHHHHHH
Confidence 999999999997542 355555444
No 148
>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate
Probab=99.22 E-value=4.3e-11 Score=119.82 Aligned_cols=98 Identities=18% Similarity=0.255 Sum_probs=78.8
Q ss_pred CeeeccCcceEEEEEc----CCCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhcCCCCcccEEEEEEeCCeeEEEEecc
Q 044615 468 HCIGNGGQGSVYKAKL----PTGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKIRHRNIVKFYGFCSHALHSFVVYEYL 543 (571)
Q Consensus 468 ~~lg~G~~g~V~~~~~----~~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~ 543 (571)
+.||+|+||.||+++. .+|+.||+|++...... ......+.+|++++++++||||+++++++.+.+..|+||||+
T Consensus 2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 80 (318)
T cd05582 2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLK-VRDRVRTKMERDILAEVNHPFIVKLHYAFQTEGKLYLILDFL 80 (318)
T ss_pred ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhh-hhhHHHHHHHHHHHHhCCCCCcccEEEEEEcCCEEEEEEcCC
Confidence 5799999999999873 36889999999753322 123456788999999999999999999999999999999999
Q ss_pred CCCChhhhhccCCCccCCCHHHHhhh
Q 044615 544 EMGSLAMNLSNDAAAEQFCWTKRMNA 569 (571)
Q Consensus 544 ~~G~L~~~l~~~~~~~~l~w~~r~~i 569 (571)
++|+|.+++.+.. .+++.....+
T Consensus 81 ~~~~L~~~l~~~~---~l~~~~~~~~ 103 (318)
T cd05582 81 RGGDLFTRLSKEV---MFTEEDVKFY 103 (318)
T ss_pred CCCcHHHHHHHcC---CCCHHHHHHH
Confidence 9999999997432 3555555444
No 149
>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th
Probab=99.22 E-value=5.2e-11 Score=117.10 Aligned_cols=104 Identities=32% Similarity=0.442 Sum_probs=84.1
Q ss_pred cCCCccCeeeccCcceEEEEEc-----CCCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhcCCCCcccEEEEEEeC--C
Q 044615 462 NNFDDGHCIGNGGQGSVYKAKL-----PTGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKIRHRNIVKFYGFCSHA--L 534 (571)
Q Consensus 462 ~~~~~~~~lg~G~~g~V~~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~--~ 534 (571)
.+|++.+.||+|+||.||+|.. .++..||+|.+.... ....+.|.+|++++++++||||+++++++... .
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~---~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~ 80 (284)
T cd05081 4 RHLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHST---AEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRR 80 (284)
T ss_pred ccceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCC---HHHHHHHHHHHHHHHhCCCCCeeEEEEEEccCCCC
Confidence 3678889999999999999973 357899999986542 23356789999999999999999999987543 4
Q ss_pred eeEEEEeccCCCChhhhhccCCCccCCCHHHHhhhc
Q 044615 535 HSFVVYEYLEMGSLAMNLSNDAAAEQFCWTKRMNAI 570 (571)
Q Consensus 535 ~~~lv~e~~~~G~L~~~l~~~~~~~~l~w~~r~~ia 570 (571)
..++||||+++|+|.+++.+.. ..++|..+..++
T Consensus 81 ~~~lv~e~~~~~~L~~~l~~~~--~~l~~~~~~~~~ 114 (284)
T cd05081 81 NLRLVMEYLPYGSLRDYLQKHR--ERLDHRKLLLYA 114 (284)
T ss_pred ceEEEEEecCCCCHHHHHHhcC--cCCCHHHHHHHH
Confidence 6889999999999999997543 247788776654
No 150
>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=99.22 E-value=6.3e-11 Score=116.48 Aligned_cols=91 Identities=23% Similarity=0.352 Sum_probs=77.5
Q ss_pred cCCCccCeeeccCcceEEEEEc-----CCCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhcCCCCcccEEEEEEeCCee
Q 044615 462 NNFDDGHCIGNGGQGSVYKAKL-----PTGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKIRHRNIVKFYGFCSHALHS 536 (571)
Q Consensus 462 ~~~~~~~~lg~G~~g~V~~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~ 536 (571)
.+|++.+.||+|+||.||+|.. .++..||+|.+.... .....+.|.+|++++++++||||+++++++......
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 82 (283)
T cd05090 5 SAVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDIN--NPQQWGEFQQEASLMAELHHPNIVCLLGVVTQEQPV 82 (283)
T ss_pred hhceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCC--CHHHHHHHHHHHHHHhhCCCCCeeeEEEEEecCCce
Confidence 3577889999999999999973 256789999987432 223356799999999999999999999999999999
Q ss_pred EEEEeccCCCChhhhhcc
Q 044615 537 FVVYEYLEMGSLAMNLSN 554 (571)
Q Consensus 537 ~lv~e~~~~G~L~~~l~~ 554 (571)
|+||||+++|+|.+++..
T Consensus 83 ~lv~e~~~~~~L~~~l~~ 100 (283)
T cd05090 83 CMLFEYLNQGDLHEFLIM 100 (283)
T ss_pred EEEEEcCCCCcHHHHHHh
Confidence 999999999999999963
No 151
>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.22 E-value=3.5e-11 Score=116.95 Aligned_cols=86 Identities=29% Similarity=0.436 Sum_probs=71.3
Q ss_pred CCCccCeeeccCcceEEEEEcCCCCEEEEEEccCCCCCchHhHHHHHHHHHHHhh--cCCCCcccEEEEEEeC----Cee
Q 044615 463 NFDDGHCIGNGGQGSVYKAKLPTGEIVDVKKFHSPLPDEMACQQEFLNEVNALTK--IRHRNIVKFYGFCSHA----LHS 536 (571)
Q Consensus 463 ~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~--l~H~niv~l~~~~~~~----~~~ 536 (571)
.....+.||+|.||+||+|.+ .|+.||||++.... .+.+.+|.+|..+ ++|+||..+++.-... .++
T Consensus 212 qI~L~e~IGkGRyGEVwrG~w-rGe~VAVKiF~srd------E~SWfrEtEIYqTvmLRHENILgFIaaD~~~~gs~TQL 284 (513)
T KOG2052|consen 212 QIVLQEIIGKGRFGEVWRGRW-RGEDVAVKIFSSRD------ERSWFRETEIYQTVMLRHENILGFIAADNKDNGSWTQL 284 (513)
T ss_pred eeEEEEEecCccccceeeccc-cCCceEEEEecccc------hhhhhhHHHHHHHHHhccchhhhhhhccccCCCceEEE
Confidence 466788999999999999998 58899999996432 2457788888765 5999999998876543 368
Q ss_pred EEEEeccCCCChhhhhccC
Q 044615 537 FVVYEYLEMGSLAMNLSND 555 (571)
Q Consensus 537 ~lv~e~~~~G~L~~~l~~~ 555 (571)
|+|.||-+.|||+|||.+.
T Consensus 285 wLvTdYHe~GSL~DyL~r~ 303 (513)
T KOG2052|consen 285 WLVTDYHEHGSLYDYLNRN 303 (513)
T ss_pred EEeeecccCCcHHHHHhhc
Confidence 9999999999999999863
No 152
>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt
Probab=99.21 E-value=2.7e-11 Score=118.47 Aligned_cols=97 Identities=16% Similarity=0.336 Sum_probs=77.0
Q ss_pred eeeccCcceEEEEEcC-C------------------------CCEEEEEEccCCCCCchHhHHHHHHHHHHHhhcCCCCc
Q 044615 469 CIGNGGQGSVYKAKLP-T------------------------GEIVDVKKFHSPLPDEMACQQEFLNEVNALTKIRHRNI 523 (571)
Q Consensus 469 ~lg~G~~g~V~~~~~~-~------------------------~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~H~ni 523 (571)
.||+|+||.||+|... + ...||+|.+.... .....+|.+|+.+++.++||||
T Consensus 2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~---~~~~~~~~~~~~~~~~l~h~ni 78 (274)
T cd05076 2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSH---RDIALAFFETASLMSQVSHIHL 78 (274)
T ss_pred CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHH---HHHHHHHHHHHHHHhcCCCCCe
Confidence 5899999999999731 1 1358889886432 2234678899999999999999
Q ss_pred ccEEEEEEeCCeeEEEEeccCCCChhhhhccCCCccCCCHHHHhhhc
Q 044615 524 VKFYGFCSHALHSFVVYEYLEMGSLAMNLSNDAAAEQFCWTKRMNAI 570 (571)
Q Consensus 524 v~l~~~~~~~~~~~lv~e~~~~G~L~~~l~~~~~~~~l~w~~r~~ia 570 (571)
+++++++.+....++||||+++|+|.+++..... .++|..+++++
T Consensus 79 v~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~--~~~~~~~~~i~ 123 (274)
T cd05076 79 AFVHGVCVRGSENIMVEEFVEHGPLDVCLRKEKG--RVPVAWKITVA 123 (274)
T ss_pred eeEEEEEEeCCceEEEEecCCCCcHHHHHHhcCC--CCCHHHHHHHH
Confidence 9999999999999999999999999999875333 46677676654
No 153
>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and
Probab=99.21 E-value=5.4e-11 Score=119.35 Aligned_cols=104 Identities=16% Similarity=0.164 Sum_probs=83.1
Q ss_pred CCCccCeeeccCcceEEEEE-cCCCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhc-CCCCcccEEEEEEeCCeeEEEE
Q 044615 463 NFDDGHCIGNGGQGSVYKAK-LPTGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKI-RHRNIVKFYGFCSHALHSFVVY 540 (571)
Q Consensus 463 ~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l-~H~niv~l~~~~~~~~~~~lv~ 540 (571)
+|.+.+.||+|+||.||+|. ..+++.||||++.+.........+.+..|..++..+ +||+|+++++++.+.+..|+||
T Consensus 1 df~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (323)
T cd05616 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTMDRLYFVM 80 (323)
T ss_pred CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEecCCEEEEEE
Confidence 57888999999999999998 457889999999764333333345677888888777 6899999999999999999999
Q ss_pred eccCCCChhhhhccCCCccCCCHHHHhhh
Q 044615 541 EYLEMGSLAMNLSNDAAAEQFCWTKRMNA 569 (571)
Q Consensus 541 e~~~~G~L~~~l~~~~~~~~l~w~~r~~i 569 (571)
||+++|+|.+++.... .+++.+...+
T Consensus 81 E~~~~g~L~~~~~~~~---~~~~~~~~~~ 106 (323)
T cd05616 81 EYVNGGDLMYQIQQVG---RFKEPHAVFY 106 (323)
T ss_pred cCCCCCCHHHHHHHcC---CCCHHHHHHH
Confidence 9999999999987542 3566655544
No 154
>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal
Probab=99.21 E-value=3.8e-11 Score=120.20 Aligned_cols=99 Identities=19% Similarity=0.272 Sum_probs=78.4
Q ss_pred CeeeccCcceEEEEEc-CCCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhc-CCCCcccEEEEEEeCCeeEEEEeccCC
Q 044615 468 HCIGNGGQGSVYKAKL-PTGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKI-RHRNIVKFYGFCSHALHSFVVYEYLEM 545 (571)
Q Consensus 468 ~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l-~H~niv~l~~~~~~~~~~~lv~e~~~~ 545 (571)
+.||+|+||.||+|+. .+++.||||++.+.........+.+.+|++++... +||||+++++++.+.+..|+||||+++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~iv~Ey~~~ 80 (320)
T cd05590 1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQTPDRLFFVMEFVNG 80 (320)
T ss_pred CeeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEEcCCEEEEEEcCCCC
Confidence 3689999999999994 57899999998754322223356678899888876 799999999999999999999999999
Q ss_pred CChhhhhccCCCccCCCHHHHhhh
Q 044615 546 GSLAMNLSNDAAAEQFCWTKRMNA 569 (571)
Q Consensus 546 G~L~~~l~~~~~~~~l~w~~r~~i 569 (571)
|+|.+++.... .+++.....+
T Consensus 81 g~L~~~i~~~~---~l~~~~~~~~ 101 (320)
T cd05590 81 GDLMFHIQKSR---RFDEARARFY 101 (320)
T ss_pred chHHHHHHHcC---CCCHHHHHHH
Confidence 99999987543 3555554443
No 155
>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways
Probab=99.21 E-value=5.9e-11 Score=119.23 Aligned_cols=100 Identities=15% Similarity=0.170 Sum_probs=81.9
Q ss_pred CeeeccCcceEEEEE-cCCCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhc-CCCCcccEEEEEEeCCeeEEEEeccCC
Q 044615 468 HCIGNGGQGSVYKAK-LPTGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKI-RHRNIVKFYGFCSHALHSFVVYEYLEM 545 (571)
Q Consensus 468 ~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l-~H~niv~l~~~~~~~~~~~lv~e~~~~ 545 (571)
+.||+|+||+||+|+ ..+++.||+|++.+.........+.+.+|+.++.++ +||||+++++++.+.+..|+||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (327)
T cd05617 1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTTSRLFLVIEYVNG 80 (327)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeCCEEEEEEeCCCC
Confidence 469999999999999 457899999999865433334456788999999888 699999999999999999999999999
Q ss_pred CChhhhhccCCCccCCCHHHHhhhc
Q 044615 546 GSLAMNLSNDAAAEQFCWTKRMNAI 570 (571)
Q Consensus 546 G~L~~~l~~~~~~~~l~w~~r~~ia 570 (571)
|+|.+++...+ .+++..+..|+
T Consensus 81 ~~L~~~~~~~~---~l~~~~~~~~~ 102 (327)
T cd05617 81 GDLMFHMQRQR---KLPEEHARFYA 102 (327)
T ss_pred CcHHHHHHHcC---CCCHHHHHHHH
Confidence 99999886432 46666665553
No 156
>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk. Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r
Probab=99.21 E-value=6.5e-11 Score=114.78 Aligned_cols=103 Identities=23% Similarity=0.370 Sum_probs=85.4
Q ss_pred cCCCccCeeeccCcceEEEEEcCCCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhcCCCCcccEEEEEEeCCeeEEEEe
Q 044615 462 NNFDDGHCIGNGGQGSVYKAKLPTGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKIRHRNIVKFYGFCSHALHSFVVYE 541 (571)
Q Consensus 462 ~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~e 541 (571)
++|++.+.||+|+||.||+|..+++..+|+|.+...... .+.|.+|+.++++++|||++++++++. ....|++||
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~k~~~~~~~~----~~~~~~E~~~l~~l~~~~i~~~~~~~~-~~~~~lv~e 80 (260)
T cd05070 6 ESLQLIKKLGNGQFGEVWMGTWNGNTKVAVKTLKPGTMS----PESFLEEAQIMKKLRHDKLVQLYAVVS-EEPIYIVTE 80 (260)
T ss_pred HHhhhhheeccccCceEEEEEecCCceeEEEEecCCCCC----HHHHHHHHHHHHhcCCCceEEEEeEEC-CCCcEEEEE
Confidence 358888999999999999999777888999998754332 356899999999999999999999885 456899999
Q ss_pred ccCCCChhhhhccCCCccCCCHHHHhhhc
Q 044615 542 YLEMGSLAMNLSNDAAAEQFCWTKRMNAI 570 (571)
Q Consensus 542 ~~~~G~L~~~l~~~~~~~~l~w~~r~~ia 570 (571)
|+++|+|.+++++.. ...++|.++.+|+
T Consensus 81 ~~~~~~L~~~~~~~~-~~~~~~~~~~~~~ 108 (260)
T cd05070 81 YMSKGSLLDFLKDGE-GRALKLPNLVDMA 108 (260)
T ss_pred ecCCCcHHHHHHhcC-CCCCCHHHHHHHH
Confidence 999999999997542 2357888777764
No 157
>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte
Probab=99.21 E-value=6.1e-11 Score=115.81 Aligned_cols=104 Identities=27% Similarity=0.370 Sum_probs=83.5
Q ss_pred CCCccCeeeccCcceEEEEE-cCCCCEEEEEEccCCCCCc-------hHhHHHHHHHHHHHhhcCCCCcccEEEEEEeCC
Q 044615 463 NFDDGHCIGNGGQGSVYKAK-LPTGEIVDVKKFHSPLPDE-------MACQQEFLNEVNALTKIRHRNIVKFYGFCSHAL 534 (571)
Q Consensus 463 ~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~-------~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~ 534 (571)
.|...+.||+|+||.||+|. ..+++.||+|.+....... ....+.+.+|+.++++++|||++++++++...+
T Consensus 2 ~~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~ 81 (272)
T cd06629 2 KWVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFETTEE 81 (272)
T ss_pred ceeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEeccCC
Confidence 36778899999999999998 4578999999886432111 112356889999999999999999999999999
Q ss_pred eeEEEEeccCCCChhhhhccCCCccCCCHHHHhhh
Q 044615 535 HSFVVYEYLEMGSLAMNLSNDAAAEQFCWTKRMNA 569 (571)
Q Consensus 535 ~~~lv~e~~~~G~L~~~l~~~~~~~~l~w~~r~~i 569 (571)
..++||||+++|+|.+++++. ..+++.....|
T Consensus 82 ~~~lv~e~~~~~~L~~~l~~~---~~l~~~~~~~~ 113 (272)
T cd06629 82 YLSIFLEYVPGGSIGSCLRTY---GRFEEQLVRFF 113 (272)
T ss_pred ceEEEEecCCCCcHHHHHhhc---cCCCHHHHHHH
Confidence 999999999999999999754 24666655443
No 158
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=99.21 E-value=7.8e-11 Score=116.13 Aligned_cols=102 Identities=21% Similarity=0.295 Sum_probs=82.0
Q ss_pred cCCCccCeeeccCcceEEEEE-cCCCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhcCCCCcccEEEEEEeCCeeEEEE
Q 044615 462 NNFDDGHCIGNGGQGSVYKAK-LPTGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKIRHRNIVKFYGFCSHALHSFVVY 540 (571)
Q Consensus 462 ~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~ 540 (571)
++|+..+.||+|+||.||+|. ..+++.||+|.+...... .....+.+|++++++++||||+++++++.+.+..|+||
T Consensus 5 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 82 (288)
T cd07871 5 ETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHEE--GAPCTAIREVSLLKNLKHANIVTLHDIIHTERCLTLVF 82 (288)
T ss_pred ccceEeeEEecCCCEEEEEEEECCCCCEEEEEEecccccC--CcchhHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEEE
Confidence 468999999999999999998 457899999998754322 22356789999999999999999999999999999999
Q ss_pred eccCCCChhhhhccCCCccCCCHHHHhh
Q 044615 541 EYLEMGSLAMNLSNDAAAEQFCWTKRMN 568 (571)
Q Consensus 541 e~~~~G~L~~~l~~~~~~~~l~w~~r~~ 568 (571)
||+++ +|.+++...+. .+++.....
T Consensus 83 e~~~~-~l~~~l~~~~~--~~~~~~~~~ 107 (288)
T cd07871 83 EYLDS-DLKQYLDNCGN--LMSMHNVKI 107 (288)
T ss_pred eCCCc-CHHHHHHhcCC--CCCHHHHHH
Confidence 99985 99998875432 345544433
No 159
>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4. Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s
Probab=99.21 E-value=5.7e-11 Score=116.23 Aligned_cols=107 Identities=24% Similarity=0.463 Sum_probs=87.2
Q ss_pred cCCCccCeeeccCcceEEEEEcC------CCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhcCCCCcccEEEEEEeCCe
Q 044615 462 NNFDDGHCIGNGGQGSVYKAKLP------TGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKIRHRNIVKFYGFCSHALH 535 (571)
Q Consensus 462 ~~~~~~~~lg~G~~g~V~~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~ 535 (571)
++|+....||+|+||.||+|+.+ +...||+|.+...... ...+.|.+|++++++++||||+++++++.+.+.
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~--~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 82 (275)
T cd05046 5 SNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDE--NLQSEFRRELDMFRKLSHKNVVRLLGLCREAEP 82 (275)
T ss_pred HhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCccch--HHHHHHHHHHHHHHhcCCcceeeeEEEECCCCc
Confidence 46888899999999999999843 3467999988643221 235679999999999999999999999999899
Q ss_pred eEEEEeccCCCChhhhhccCCCc------cCCCHHHHhhhc
Q 044615 536 SFVVYEYLEMGSLAMNLSNDAAA------EQFCWTKRMNAI 570 (571)
Q Consensus 536 ~~lv~e~~~~G~L~~~l~~~~~~------~~l~w~~r~~ia 570 (571)
.|+||||+++|+|.+++...... ..++|..++.++
T Consensus 83 ~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~ 123 (275)
T cd05046 83 HYMILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALC 123 (275)
T ss_pred ceEEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHH
Confidence 99999999999999999754422 258888887764
No 160
>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=99.21 E-value=7.2e-11 Score=114.14 Aligned_cols=102 Identities=22% Similarity=0.415 Sum_probs=84.6
Q ss_pred cCCCccCeeeccCcceEEEEEcCCCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhcCCCCcccEEEEEEeCCeeEEEEe
Q 044615 462 NNFDDGHCIGNGGQGSVYKAKLPTGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKIRHRNIVKFYGFCSHALHSFVVYE 541 (571)
Q Consensus 462 ~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~e 541 (571)
.+|+..+.||+|+||.||+|....+..+|+|.+...... ..+|.+|++++++++|||++++++++......++|||
T Consensus 4 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~k~~~~~~~~----~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e 79 (256)
T cd05112 4 SELTLVQEIGSGQFGLVWLGYWLEKRKVAIKTIREGAMS----EEDFIEEAQVMMKLSHPKLVQLYGVCTERSPICLVFE 79 (256)
T ss_pred hHeEEEeeecCcccceEEEEEEeCCCeEEEEECCCCCCC----HHHHHHHHHHHHhCCCCCeeeEEEEEccCCceEEEEE
Confidence 357788999999999999998766888999998754322 3568899999999999999999999999999999999
Q ss_pred ccCCCChhhhhccCCCccCCCHHHHhhh
Q 044615 542 YLEMGSLAMNLSNDAAAEQFCWTKRMNA 569 (571)
Q Consensus 542 ~~~~G~L~~~l~~~~~~~~l~w~~r~~i 569 (571)
|+++|+|.+++..... .+.|.....+
T Consensus 80 ~~~~~~L~~~~~~~~~--~~~~~~~~~~ 105 (256)
T cd05112 80 FMEHGCLSDYLRAQRG--KFSQETLLGM 105 (256)
T ss_pred cCCCCcHHHHHHhCcc--CCCHHHHHHH
Confidence 9999999999975432 3566655444
No 161
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=99.21 E-value=6.4e-11 Score=116.02 Aligned_cols=109 Identities=21% Similarity=0.323 Sum_probs=87.0
Q ss_pred HccCCCccCeeeccCcceEEEEEcC------CCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhcCCCCcccEEEEEEeC
Q 044615 460 ATNNFDDGHCIGNGGQGSVYKAKLP------TGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKIRHRNIVKFYGFCSHA 533 (571)
Q Consensus 460 ~~~~~~~~~~lg~G~~g~V~~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~ 533 (571)
..++|+..+.||+|+||.||+|... .+..||+|.+.... ......+|.+|+.+++.++||||+++++++.+.
T Consensus 4 ~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~--~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~ 81 (277)
T cd05062 4 AREKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAA--SMRERIEFLNEASVMKEFNCHHVVRLLGVVSQG 81 (277)
T ss_pred cHHHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccC--CHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCC
Confidence 3456899999999999999998732 35679999986432 223456799999999999999999999999999
Q ss_pred CeeEEEEeccCCCChhhhhccCCC-------ccCCCHHHHhhhc
Q 044615 534 LHSFVVYEYLEMGSLAMNLSNDAA-------AEQFCWTKRMNAI 570 (571)
Q Consensus 534 ~~~~lv~e~~~~G~L~~~l~~~~~-------~~~l~w~~r~~ia 570 (571)
...++||||+++|+|.+++++... ...++|.+.+.++
T Consensus 82 ~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 125 (277)
T cd05062 82 QPTLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMA 125 (277)
T ss_pred CCeEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHH
Confidence 999999999999999999975322 2346777776653
No 162
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes
Probab=99.21 E-value=4.5e-11 Score=117.75 Aligned_cols=104 Identities=25% Similarity=0.334 Sum_probs=81.9
Q ss_pred cCCCccCeeeccCcceEEEEEc-CCCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhcCCCCcccEEEEEEeCCeeEEEE
Q 044615 462 NNFDDGHCIGNGGQGSVYKAKL-PTGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKIRHRNIVKFYGFCSHALHSFVVY 540 (571)
Q Consensus 462 ~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~ 540 (571)
++|++.+.||+|+||.||+|+. .+++.||||++...... ....+.+.+|++++++++||||+++++++...+..|+||
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 79 (287)
T cd07848 1 NKFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEEN-EEVKETTLRELKMLRTLKQENIVELKEAFRRRGKLYLVF 79 (287)
T ss_pred CCceEEEEecccCCEEEEEEEECCCCcEEEEEEEeccccc-ccchhhHHHHHHHHHhCCCccccchhhhEecCCEEEEEE
Confidence 3688999999999999999995 57889999999754322 233567889999999999999999999999999999999
Q ss_pred eccCCCChhhhhccCCCccCCCHHHHhhh
Q 044615 541 EYLEMGSLAMNLSNDAAAEQFCWTKRMNA 569 (571)
Q Consensus 541 e~~~~G~L~~~l~~~~~~~~l~w~~r~~i 569 (571)
||+++|.+..+.... ..+++.....+
T Consensus 80 e~~~~~~l~~~~~~~---~~~~~~~~~~~ 105 (287)
T cd07848 80 EYVEKNMLELLEEMP---NGVPPEKVRSY 105 (287)
T ss_pred ecCCCCHHHHHHhcC---CCCCHHHHHHH
Confidence 999998776554322 23555544433
No 163
>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=99.21 E-value=6.7e-11 Score=117.51 Aligned_cols=107 Identities=24% Similarity=0.398 Sum_probs=84.3
Q ss_pred cCCCccCeeeccCcceEEEEEc-CCCCE--EEEEEccCCCCCchHhHHHHHHHHHHHhhc-CCCCcccEEEEEEeCCeeE
Q 044615 462 NNFDDGHCIGNGGQGSVYKAKL-PTGEI--VDVKKFHSPLPDEMACQQEFLNEVNALTKI-RHRNIVKFYGFCSHALHSF 537 (571)
Q Consensus 462 ~~~~~~~~lg~G~~g~V~~~~~-~~~~~--vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l-~H~niv~l~~~~~~~~~~~ 537 (571)
++|++.+.||+|+||.||+|.. .++.. +|+|.+.... .....+.+.+|++++.++ +||||+++++++.+.+..|
T Consensus 7 ~~~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~~--~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~~~~~~ 84 (303)
T cd05088 7 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYA--SKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLY 84 (303)
T ss_pred hhceeeeeecCCCCceEEEEEEccCCceeeEEEEEecccC--CHHHHHHHHHHHHHHHHhcCCCCcceEEEEECCCCCce
Confidence 4688889999999999999984 45543 5777765322 223356789999999999 8999999999999999999
Q ss_pred EEEeccCCCChhhhhccCCC-------------ccCCCHHHHhhhc
Q 044615 538 VVYEYLEMGSLAMNLSNDAA-------------AEQFCWTKRMNAI 570 (571)
Q Consensus 538 lv~e~~~~G~L~~~l~~~~~-------------~~~l~w~~r~~ia 570 (571)
+||||+++|+|.+++++... ...+++.+.+.++
T Consensus 85 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 130 (303)
T cd05088 85 LAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFA 130 (303)
T ss_pred EEEEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHH
Confidence 99999999999999975421 1246777766654
No 164
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=99.21 E-value=4.8e-11 Score=115.95 Aligned_cols=103 Identities=22% Similarity=0.380 Sum_probs=86.5
Q ss_pred CCCccCeeeccCcceEEEEE-cCCCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhcCCCCcccEEEEEEeCCeeEEEEe
Q 044615 463 NFDDGHCIGNGGQGSVYKAK-LPTGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKIRHRNIVKFYGFCSHALHSFVVYE 541 (571)
Q Consensus 463 ~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~e 541 (571)
+|+..+.||+|+||.||+|. .+.+..||+|.+.... ...+++.+|++++++++||||+++++++...+..++|||
T Consensus 7 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~~----~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 82 (263)
T cd05052 7 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT----MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITE 82 (263)
T ss_pred HeEEeeecCCcccceEEEEEEecCCceEEEEEecCCc----hHHHHHHHHHHHHHhCCCCChhheEEEEcCCCCcEEEEE
Confidence 47788899999999999998 4568899999986432 224678999999999999999999999999999999999
Q ss_pred ccCCCChhhhhccCCCccCCCHHHHhhhc
Q 044615 542 YLEMGSLAMNLSNDAAAEQFCWTKRMNAI 570 (571)
Q Consensus 542 ~~~~G~L~~~l~~~~~~~~l~w~~r~~ia 570 (571)
|+++|+|.+++.... ...++|..++.++
T Consensus 83 ~~~~~~L~~~~~~~~-~~~l~~~~~~~~~ 110 (263)
T cd05052 83 FMTYGNLLDYLRECN-RQEVNAVVLLYMA 110 (263)
T ss_pred eCCCCcHHHHHHhCC-CCCCCHHHHHHHH
Confidence 999999999997543 2357888776654
No 165
>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase. Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1
Probab=99.21 E-value=1e-10 Score=113.70 Aligned_cols=106 Identities=25% Similarity=0.319 Sum_probs=87.5
Q ss_pred cCCCccCeeeccCcceEEEEE-cCCCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhcCCCCcccEEEEEEeCCeeEEEE
Q 044615 462 NNFDDGHCIGNGGQGSVYKAK-LPTGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKIRHRNIVKFYGFCSHALHSFVVY 540 (571)
Q Consensus 462 ~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~ 540 (571)
++|++.+.||.|+||.||+|. ..++..+|+|++....... ..+.+.+|+++++.++||||+++++.+...+..|+||
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~--~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~ 78 (267)
T cd06610 1 DDYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQT--SVDELRKEVQAMSQCNHPNVVKYYTSFVVGDELWLVM 78 (267)
T ss_pred CcceeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcch--HHHHHHHHHHHHHhcCCCCEEEEEEEEeeCCEEEEEE
Confidence 368899999999999999999 4578899999987543322 4577999999999999999999999999999999999
Q ss_pred eccCCCChhhhhccCCCccCCCHHHHhhh
Q 044615 541 EYLEMGSLAMNLSNDAAAEQFCWTKRMNA 569 (571)
Q Consensus 541 e~~~~G~L~~~l~~~~~~~~l~w~~r~~i 569 (571)
||+++|+|.++++.......++|.....+
T Consensus 79 e~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 107 (267)
T cd06610 79 PYLSGGSLLDIMKSSYPRGGLDEAIIATV 107 (267)
T ss_pred eccCCCcHHHHHHHhcccCCCCHHHHHHH
Confidence 99999999999975433234666655443
No 166
>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src. Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo
Probab=99.21 E-value=5.9e-11 Score=115.25 Aligned_cols=103 Identities=21% Similarity=0.354 Sum_probs=83.6
Q ss_pred cCCCccCeeeccCcceEEEEEcCCCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhcCCCCcccEEEEEEeCCeeEEEEe
Q 044615 462 NNFDDGHCIGNGGQGSVYKAKLPTGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKIRHRNIVKFYGFCSHALHSFVVYE 541 (571)
Q Consensus 462 ~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~e 541 (571)
+.|.+.+.||+|+||.||+|...+...||+|++..... ..++|.+|++++++++||||+++++++. ....|+|||
T Consensus 6 ~~~~~~~~lg~g~~~~v~~~~~~~~~~valK~~~~~~~----~~~~~~~E~~~l~~l~~~~i~~~~~~~~-~~~~~lv~e 80 (262)
T cd05071 6 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTM----SPEAFLQEAQVMKKLRHEKLVQLYAVVS-EEPIYIVTE 80 (262)
T ss_pred HHeeEeeecCCCCCCcEEEEEecCCceEEEEecccCcc----CHHHHHHHHHHHHhCCCCCcceEEEEEC-CCCcEEEEE
Confidence 45889999999999999999866666799999975332 2357899999999999999999999875 456799999
Q ss_pred ccCCCChhhhhccCCCccCCCHHHHhhhc
Q 044615 542 YLEMGSLAMNLSNDAAAEQFCWTKRMNAI 570 (571)
Q Consensus 542 ~~~~G~L~~~l~~~~~~~~l~w~~r~~ia 570 (571)
|+++|+|.+++.... ...++|..+..++
T Consensus 81 ~~~~~~L~~~~~~~~-~~~~~~~~~~~~~ 108 (262)
T cd05071 81 YMSKGSLLDFLKGEM-GKYLRLPQLVDMA 108 (262)
T ss_pred cCCCCcHHHHHhhcc-ccCCCHHHHHHHH
Confidence 999999999997542 2356777776654
No 167
>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk
Probab=99.20 E-value=8.1e-11 Score=113.81 Aligned_cols=103 Identities=26% Similarity=0.419 Sum_probs=87.1
Q ss_pred cCCCccCeeeccCcceEEEEEcCCCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhcCCCCcccEEEEEEeCCeeEEEEe
Q 044615 462 NNFDDGHCIGNGGQGSVYKAKLPTGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKIRHRNIVKFYGFCSHALHSFVVYE 541 (571)
Q Consensus 462 ~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~e 541 (571)
++|+..+.||+|+||.||+|... |+.||+|.+..... ..+++.+|+.++++++||||+++++++.+.+..++|||
T Consensus 6 ~~~~~~~~ig~g~~g~v~~~~~~-~~~v~iK~~~~~~~----~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e 80 (256)
T cd05039 6 KELKLGATIGKGEFGDVMLGDYR-GQKVAVKCLKDDST----AAQAFLAEASVMTTLRHPNLVQLLGVVLQGNPLYIVTE 80 (256)
T ss_pred hhccceeeeecCCCceEEEEEec-CcEEEEEEeccchh----HHHHHHHHHHHHHhcCCcceeeeEEEEcCCCCeEEEEE
Confidence 46888999999999999999864 78899999975432 35779999999999999999999999998899999999
Q ss_pred ccCCCChhhhhccCCCccCCCHHHHhhhc
Q 044615 542 YLEMGSLAMNLSNDAAAEQFCWTKRMNAI 570 (571)
Q Consensus 542 ~~~~G~L~~~l~~~~~~~~l~w~~r~~ia 570 (571)
|+++|+|.+++..... ..++|.....++
T Consensus 81 ~~~~~~L~~~~~~~~~-~~~~~~~~~~~~ 108 (256)
T cd05039 81 YMAKGSLVDYLRSRGR-AVITLAQQLGFA 108 (256)
T ss_pred ecCCCcHHHHHHhcCC-CCCCHHHHHHHH
Confidence 9999999999975432 257777776654
No 168
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=99.20 E-value=3.7e-11 Score=117.91 Aligned_cols=104 Identities=20% Similarity=0.269 Sum_probs=86.4
Q ss_pred cCCCccCeeeccCcceEEEEEc-CCCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhcCCCCcccEEEEEEeCCeeEEEE
Q 044615 462 NNFDDGHCIGNGGQGSVYKAKL-PTGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKIRHRNIVKFYGFCSHALHSFVVY 540 (571)
Q Consensus 462 ~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~ 540 (571)
++|++.+.||+|+||.||+|.. .++..+|+|.+... .....+.|.+|++++++++||||+++++++.++...|+||
T Consensus 5 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~---~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 81 (280)
T cd06611 5 DIWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIE---SEEELEDFMVEIDILSECKHPNIVGLYEAYFYENKLWILI 81 (280)
T ss_pred hHHHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeC---CHHHHHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEe
Confidence 4588889999999999999994 57899999998643 2234567999999999999999999999999999999999
Q ss_pred eccCCCChhhhhccCCCccCCCHHHHhhhc
Q 044615 541 EYLEMGSLAMNLSNDAAAEQFCWTKRMNAI 570 (571)
Q Consensus 541 e~~~~G~L~~~l~~~~~~~~l~w~~r~~ia 570 (571)
||+++|+|.+++...+. .+++.....++
T Consensus 82 e~~~~~~L~~~~~~~~~--~l~~~~~~~~~ 109 (280)
T cd06611 82 EFCDGGALDSIMLELER--GLTEPQIRYVC 109 (280)
T ss_pred eccCCCcHHHHHHHhcC--CCCHHHHHHHH
Confidence 99999999999875332 46666555543
No 169
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=99.20 E-value=1.2e-10 Score=114.05 Aligned_cols=101 Identities=22% Similarity=0.288 Sum_probs=84.1
Q ss_pred CCccCeeeccCcceEEEEE-cCCCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhcCCCCcccEEEEEEeCCeeEEEEec
Q 044615 464 FDDGHCIGNGGQGSVYKAK-LPTGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKIRHRNIVKFYGFCSHALHSFVVYEY 542 (571)
Q Consensus 464 ~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 542 (571)
|+..+.||+|+||.||+|. ..++..||+|.+..... ....+.+.+|+.++++++||||+++++++...+..|+||||
T Consensus 6 ~~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~--~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 83 (277)
T cd06641 6 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEA--EDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEY 83 (277)
T ss_pred hhhheeEeecCCeEEEEEEECCCCcEEEEEEeccccc--hHHHHHHHHHHHHHHhcCCCCEeEEEEEEEeCCeEEEEEEe
Confidence 6778899999999999998 45789999999864322 23356789999999999999999999999999999999999
Q ss_pred cCCCChhhhhccCCCccCCCHHHHhhhc
Q 044615 543 LEMGSLAMNLSNDAAAEQFCWTKRMNAI 570 (571)
Q Consensus 543 ~~~G~L~~~l~~~~~~~~l~w~~r~~ia 570 (571)
+++|+|.+++... .++|.....++
T Consensus 84 ~~~~~l~~~i~~~----~~~~~~~~~~~ 107 (277)
T cd06641 84 LGGGSALDLLEPG----PLDETQIATIL 107 (277)
T ss_pred CCCCcHHHHHhcC----CCCHHHHHHHH
Confidence 9999999998642 46676665543
No 170
>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti
Probab=99.20 E-value=8.7e-11 Score=113.58 Aligned_cols=105 Identities=20% Similarity=0.260 Sum_probs=85.8
Q ss_pred CCCccCeeeccCcceEEEEE-cCCCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhcCCCCcccEEEEEEeCCeeEEEEe
Q 044615 463 NFDDGHCIGNGGQGSVYKAK-LPTGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKIRHRNIVKFYGFCSHALHSFVVYE 541 (571)
Q Consensus 463 ~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~e 541 (571)
+|+..+.||+|+||.||.+. ..+|+.||+|.+...... ....+++.+|++++++++||||+++++++.+.+..|+|||
T Consensus 1 ~y~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e 79 (256)
T cd08218 1 KYVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMS-PKEREESRKEVAVLSNMKHPNIVQYQESFEENGNLYIVMD 79 (256)
T ss_pred CceEEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCC-hHHHHHHHHHHHHHHhCCCCCeeeeEeeecCCCeEEEEEe
Confidence 47888999999999999998 557899999998754322 2345678999999999999999999999999999999999
Q ss_pred ccCCCChhhhhccCCCccCCCHHHHhhh
Q 044615 542 YLEMGSLAMNLSNDAAAEQFCWTKRMNA 569 (571)
Q Consensus 542 ~~~~G~L~~~l~~~~~~~~l~w~~r~~i 569 (571)
|+++|+|.+++..... ..+++.+.+++
T Consensus 80 ~~~~~~l~~~~~~~~~-~~~~~~~~~~~ 106 (256)
T cd08218 80 YCEGGDLYKKINAQRG-VLFPEDQILDW 106 (256)
T ss_pred cCCCCcHHHHHHhccC-CCCCHHHHHHH
Confidence 9999999999975322 23556655544
No 171
>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2
Probab=99.20 E-value=1e-10 Score=115.05 Aligned_cols=105 Identities=22% Similarity=0.320 Sum_probs=85.3
Q ss_pred CCCccCeeeccCcceEEEEEc-CCCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhcCCCCcccEEEEEEeCCeeEEEEe
Q 044615 463 NFDDGHCIGNGGQGSVYKAKL-PTGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKIRHRNIVKFYGFCSHALHSFVVYE 541 (571)
Q Consensus 463 ~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~e 541 (571)
+|+..+.||+|+||.||+|.. .++..||+|.+...... ....+.+.+|+.++.+++||||+++++++.+++..|+|||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e 79 (285)
T cd07861 1 DYTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEE-EGVPSTAIREISLLKELQHPNIVCLQDVLMQESRLYLIFE 79 (285)
T ss_pred CceEeeEecccCceEEEEEEECCCCcEEEEEEecccccc-CCchHHHHHHHHHHHhcCCCCEeeeEEEEeeCCeEEEEEe
Confidence 478889999999999999994 57899999998754322 2234678899999999999999999999999999999999
Q ss_pred ccCCCChhhhhccCCCccCCCHHHHhhh
Q 044615 542 YLEMGSLAMNLSNDAAAEQFCWTKRMNA 569 (571)
Q Consensus 542 ~~~~G~L~~~l~~~~~~~~l~w~~r~~i 569 (571)
|++ |+|.+++........+++.....+
T Consensus 80 ~~~-~~l~~~~~~~~~~~~~~~~~~~~~ 106 (285)
T cd07861 80 FLS-MDLKKYLDSLPKGQYMDAELVKSY 106 (285)
T ss_pred cCC-CCHHHHHhcCCCCCcCCHHHHHHH
Confidence 998 689998875443345777666554
No 172
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored
Probab=99.20 E-value=8.7e-11 Score=114.42 Aligned_cols=105 Identities=23% Similarity=0.451 Sum_probs=86.1
Q ss_pred cCCCccCeeeccCcceEEEEEcC-CCC---EEEEEEccCCCCCchHhHHHHHHHHHHHhhcCCCCcccEEEEEEeCCeeE
Q 044615 462 NNFDDGHCIGNGGQGSVYKAKLP-TGE---IVDVKKFHSPLPDEMACQQEFLNEVNALTKIRHRNIVKFYGFCSHALHSF 537 (571)
Q Consensus 462 ~~~~~~~~lg~G~~g~V~~~~~~-~~~---~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~ 537 (571)
.+|+..+.||+|+||.||+|..+ ++. .+|+|.+..... ....+++.+|++++++++||||+++++++.+.+..|
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 82 (268)
T cd05063 5 SHITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYT--EKQRQDFLSEASIMGQFSHHNIIRLEGVVTKFKPAM 82 (268)
T ss_pred HHceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccCC--HHHHHHHHHHHHHHhcCCCCCeeEEEEEEccCCCcE
Confidence 35788899999999999999853 333 789999865422 233567999999999999999999999999999999
Q ss_pred EEEeccCCCChhhhhccCCCccCCCHHHHhhhc
Q 044615 538 VVYEYLEMGSLAMNLSNDAAAEQFCWTKRMNAI 570 (571)
Q Consensus 538 lv~e~~~~G~L~~~l~~~~~~~~l~w~~r~~ia 570 (571)
+||||+++|+|.+++.... ..++|.++++++
T Consensus 83 lv~e~~~~~~L~~~~~~~~--~~~~~~~~~~~~ 113 (268)
T cd05063 83 IITEYMENGALDKYLRDHD--GEFSSYQLVGML 113 (268)
T ss_pred EEEEcCCCCCHHHHHHhcC--CCCCHHHHHHHH
Confidence 9999999999999997543 257788777654
No 173
>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase. Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa
Probab=99.20 E-value=6.4e-11 Score=114.86 Aligned_cols=103 Identities=21% Similarity=0.322 Sum_probs=85.5
Q ss_pred cCCCccCeeeccCcceEEEEEcCCCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhcCCCCcccEEEEEEeCCeeEEEEe
Q 044615 462 NNFDDGHCIGNGGQGSVYKAKLPTGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKIRHRNIVKFYGFCSHALHSFVVYE 541 (571)
Q Consensus 462 ~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~e 541 (571)
++|...+.||+|+||.||+|....+..+|+|.+.... ...+.|.+|++++++++|+||+++++++.+ ...|++||
T Consensus 6 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~iK~~~~~~----~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~~~v~e 80 (260)
T cd05073 6 ESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS----MSVEAFLAEANVMKTLQHDKLVKLHAVVTK-EPIYIITE 80 (260)
T ss_pred cceeEEeEecCccceEEEEEEecCCccEEEEecCCCh----hHHHHHHHHHHHHHhcCCCCcceEEEEEcC-CCeEEEEE
Confidence 4688899999999999999997677789999886432 234678999999999999999999999987 77899999
Q ss_pred ccCCCChhhhhccCCCccCCCHHHHhhhc
Q 044615 542 YLEMGSLAMNLSNDAAAEQFCWTKRMNAI 570 (571)
Q Consensus 542 ~~~~G~L~~~l~~~~~~~~l~w~~r~~ia 570 (571)
|+++|+|.+++.... ...++|.+++.++
T Consensus 81 ~~~~~~L~~~~~~~~-~~~~~~~~~~~~~ 108 (260)
T cd05073 81 FMAKGSLLDFLKSDE-GSKQPLPKLIDFS 108 (260)
T ss_pred eCCCCcHHHHHHhCC-ccccCHHHHHHHH
Confidence 999999999997543 2357787776654
No 174
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=99.20 E-value=1.1e-10 Score=116.04 Aligned_cols=92 Identities=21% Similarity=0.355 Sum_probs=77.7
Q ss_pred ccCCCccCeeeccCcceEEEEEc-CCCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhcCCCCcccEEEEEEeCCeeEEE
Q 044615 461 TNNFDDGHCIGNGGQGSVYKAKL-PTGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKIRHRNIVKFYGFCSHALHSFVV 539 (571)
Q Consensus 461 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv 539 (571)
.++|++.+.||+|+||.||+|+. .+++.||||++....... ....+.+|+.++++++||||+++++++.+....|+|
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 81 (303)
T cd07869 4 ADSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEG--TPFTAIREASLLKGLKHANIVLLHDIIHTKETLTLV 81 (303)
T ss_pred cccceEeeeEEecCCEEEEEEEECCCCCEEEEEEeccccccc--cchhHHHHHHHHhhCCCCCcCeEEEEEecCCeEEEE
Confidence 35799999999999999999994 578999999997543221 234578899999999999999999999999999999
Q ss_pred EeccCCCChhhhhccC
Q 044615 540 YEYLEMGSLAMNLSND 555 (571)
Q Consensus 540 ~e~~~~G~L~~~l~~~ 555 (571)
|||++ |+|.+++...
T Consensus 82 ~e~~~-~~l~~~~~~~ 96 (303)
T cd07869 82 FEYVH-TDLCQYMDKH 96 (303)
T ss_pred EECCC-cCHHHHHHhC
Confidence 99996 6888888654
No 175
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=99.20 E-value=1e-10 Score=115.84 Aligned_cols=101 Identities=24% Similarity=0.325 Sum_probs=85.3
Q ss_pred cCCCccCeeeccCcceEEEEE-cCCCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhcCCCCcccEEEEEEeCCeeEEEE
Q 044615 462 NNFDDGHCIGNGGQGSVYKAK-LPTGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKIRHRNIVKFYGFCSHALHSFVVY 540 (571)
Q Consensus 462 ~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~ 540 (571)
.+|+..+.||+|+||.||+|. ..+++.||+|.+...... ..+.+.+|+.+++.++||||+++++++..++..|+||
T Consensus 19 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~---~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~ 95 (297)
T cd06656 19 KKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQP---KKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVM 95 (297)
T ss_pred hhceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCccc---hHHHHHHHHHHHHhCCCCCEeeEEEEEecCCEEEEee
Confidence 568899999999999999999 568999999998754322 2466889999999999999999999999999999999
Q ss_pred eccCCCChhhhhccCCCccCCCHHHHhhh
Q 044615 541 EYLEMGSLAMNLSNDAAAEQFCWTKRMNA 569 (571)
Q Consensus 541 e~~~~G~L~~~l~~~~~~~~l~w~~r~~i 569 (571)
||+++|+|.+++.+. .+++.++..+
T Consensus 96 e~~~~~~L~~~~~~~----~~~~~~~~~~ 120 (297)
T cd06656 96 EYLAGGSLTDVVTET----CMDEGQIAAV 120 (297)
T ss_pred cccCCCCHHHHHHhC----CCCHHHHHHH
Confidence 999999999998642 3566665554
No 176
>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase. Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M
Probab=99.19 E-value=8.2e-11 Score=115.97 Aligned_cols=92 Identities=29% Similarity=0.496 Sum_probs=78.9
Q ss_pred ccCCCccCeeeccCcceEEEEEcC------CCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhcCCCCcccEEEEEEeCC
Q 044615 461 TNNFDDGHCIGNGGQGSVYKAKLP------TGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKIRHRNIVKFYGFCSHAL 534 (571)
Q Consensus 461 ~~~~~~~~~lg~G~~g~V~~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~ 534 (571)
.++|+..+.||+|+||.||+|..+ ++..||+|.+.... .....++|.+|+.++++++||||+++++++....
T Consensus 4 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~--~~~~~~~~~~ei~~l~~l~h~~iv~~~~~~~~~~ 81 (288)
T cd05050 4 RNNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEA--SADMQADFQREAALMAEFDHPNIVKLLGVCAVGK 81 (288)
T ss_pred hHhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCc--CHHHHHHHHHHHHHHHhcCCCchheEEEEEcCCC
Confidence 356888999999999999999842 46789999987543 2233567999999999999999999999999999
Q ss_pred eeEEEEeccCCCChhhhhcc
Q 044615 535 HSFVVYEYLEMGSLAMNLSN 554 (571)
Q Consensus 535 ~~~lv~e~~~~G~L~~~l~~ 554 (571)
..++||||+++|+|.+++..
T Consensus 82 ~~~lv~e~~~~~~L~~~l~~ 101 (288)
T cd05050 82 PMCLLFEYMAYGDLNEFLRH 101 (288)
T ss_pred ccEEEEecCCCCCHHHHHHH
Confidence 99999999999999999974
No 177
>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase. Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well
Probab=99.19 E-value=7.9e-11 Score=115.40 Aligned_cols=108 Identities=21% Similarity=0.327 Sum_probs=88.1
Q ss_pred ccCCCccCeeeccCcceEEEEEcC------CCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhcCCCCcccEEEEEEeCC
Q 044615 461 TNNFDDGHCIGNGGQGSVYKAKLP------TGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKIRHRNIVKFYGFCSHAL 534 (571)
Q Consensus 461 ~~~~~~~~~lg~G~~g~V~~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~ 534 (571)
.++|.+.+.||+|+||.||+|... .+..||+|.+..... ......|.+|+.++++++||||+++++++.+..
T Consensus 5 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~--~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~ 82 (277)
T cd05036 5 RDSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCS--EQDESDFLMEALIMSKFNHQNIVRLIGVSFERL 82 (277)
T ss_pred HHHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCC--HHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCC
Confidence 356888999999999999999853 456789998864322 233467999999999999999999999999999
Q ss_pred eeEEEEeccCCCChhhhhccCCC----ccCCCHHHHhhhc
Q 044615 535 HSFVVYEYLEMGSLAMNLSNDAA----AEQFCWTKRMNAI 570 (571)
Q Consensus 535 ~~~lv~e~~~~G~L~~~l~~~~~----~~~l~w~~r~~ia 570 (571)
..++||||+++|+|.+++++... ...++|..+++|+
T Consensus 83 ~~~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~ 122 (277)
T cd05036 83 PRFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCA 122 (277)
T ss_pred CcEEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHH
Confidence 99999999999999999975432 2358888877764
No 178
>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt
Probab=99.19 E-value=5.6e-11 Score=116.58 Aligned_cols=106 Identities=26% Similarity=0.481 Sum_probs=85.8
Q ss_pred cCCCccCeeeccCcceEEEEEcC------CCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhcCCCCcccEEEEEEeCCe
Q 044615 462 NNFDDGHCIGNGGQGSVYKAKLP------TGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKIRHRNIVKFYGFCSHALH 535 (571)
Q Consensus 462 ~~~~~~~~lg~G~~g~V~~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~ 535 (571)
++|.+.+.||+|+||.||+|... +++.||||.+..... ....+.|.+|++++++++||||+++++++.....
T Consensus 5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~ 82 (280)
T cd05049 5 DTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETAS--NDARKDFEREAELLTNFQHENIVKFYGVCTEGDP 82 (280)
T ss_pred HHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccCC--HHHHHHHHHHHHHHHhcCCCCchheeeEEecCCC
Confidence 45788899999999999999742 357899999875432 2235789999999999999999999999999999
Q ss_pred eEEEEeccCCCChhhhhccCCC-----------ccCCCHHHHhhh
Q 044615 536 SFVVYEYLEMGSLAMNLSNDAA-----------AEQFCWTKRMNA 569 (571)
Q Consensus 536 ~~lv~e~~~~G~L~~~l~~~~~-----------~~~l~w~~r~~i 569 (571)
.++||||+++|+|.+++...+. ...++|.+...+
T Consensus 83 ~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 127 (280)
T cd05049 83 PIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQI 127 (280)
T ss_pred eEEEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHH
Confidence 9999999999999999975421 234667666554
No 179
>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]
Probab=99.19 E-value=3.2e-12 Score=117.72 Aligned_cols=88 Identities=27% Similarity=0.429 Sum_probs=78.3
Q ss_pred CCccCeeeccCcceEEEEE-cCCCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhcCCCCcccEEEEEEeCCeeEEEEec
Q 044615 464 FDDGHCIGNGGQGSVYKAK-LPTGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKIRHRNIVKFYGFCSHALHSFVVYEY 542 (571)
Q Consensus 464 ~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 542 (571)
|++..++|+|+||.||+|. ..+|..+|+|.+..+ .+.+++..||.+|.+++.|.+|++||.|.....+||||||
T Consensus 35 FDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV~-----sDLQEIIKEISIMQQC~S~yVVKYYGSYFK~sDLWIVMEY 109 (502)
T KOG0574|consen 35 FDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPVD-----TDLQEIIKEISIMQQCKSKYVVKYYGSYFKHSDLWIVMEY 109 (502)
T ss_pred HHHHHHhcCCcchHHHHHHHhccCcEEEEEecCcc-----chHHHHHHHHHHHHHcCCchhhhhhhhhccCCceEeehhh
Confidence 5667889999999999998 558999999998754 2367899999999999999999999999999999999999
Q ss_pred cCCCChhhhhccCC
Q 044615 543 LEMGSLAMNLSNDA 556 (571)
Q Consensus 543 ~~~G~L~~~l~~~~ 556 (571)
|-.|+..+.++-+.
T Consensus 110 CGAGSiSDI~R~R~ 123 (502)
T KOG0574|consen 110 CGAGSISDIMRARR 123 (502)
T ss_pred cCCCcHHHHHHHhc
Confidence 99999999987543
No 180
>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including
Probab=99.19 E-value=7.7e-11 Score=116.62 Aligned_cols=107 Identities=20% Similarity=0.356 Sum_probs=85.2
Q ss_pred cCCCccCeeeccCcceEEEEEcCC---------------CCEEEEEEccCCCCCchHhHHHHHHHHHHHhhcCCCCcccE
Q 044615 462 NNFDDGHCIGNGGQGSVYKAKLPT---------------GEIVDVKKFHSPLPDEMACQQEFLNEVNALTKIRHRNIVKF 526 (571)
Q Consensus 462 ~~~~~~~~lg~G~~g~V~~~~~~~---------------~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l 526 (571)
.+|++.+.||+|+||.||+|.... ...||+|.+..... ....+.|.+|++++++++|||++++
T Consensus 5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~ei~~l~~l~h~~i~~~ 82 (295)
T cd05097 5 QQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVT--KTARNDFLKEIKIMSRLKNPNIIRL 82 (295)
T ss_pred HhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCC--HHHHHHHHHHHHHHHhCCCCCcCeE
Confidence 468889999999999999987421 23589999875422 2335679999999999999999999
Q ss_pred EEEEEeCCeeEEEEeccCCCChhhhhccCCC---------ccCCCHHHHhhhc
Q 044615 527 YGFCSHALHSFVVYEYLEMGSLAMNLSNDAA---------AEQFCWTKRMNAI 570 (571)
Q Consensus 527 ~~~~~~~~~~~lv~e~~~~G~L~~~l~~~~~---------~~~l~w~~r~~ia 570 (571)
++++...+..++||||+++|+|.+++..... ...++|..+++|+
T Consensus 83 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~ 135 (295)
T cd05097 83 LGVCVSDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMA 135 (295)
T ss_pred EEEEcCCCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHH
Confidence 9999999999999999999999999965321 1246777776654
No 181
>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with
Probab=99.19 E-value=1.2e-10 Score=112.59 Aligned_cols=106 Identities=18% Similarity=0.245 Sum_probs=87.7
Q ss_pred CCCccCeeeccCcceEEEEE-cCCCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhcCCCCcccEEEEEEeCCeeEEEEe
Q 044615 463 NFDDGHCIGNGGQGSVYKAK-LPTGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKIRHRNIVKFYGFCSHALHSFVVYE 541 (571)
Q Consensus 463 ~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~e 541 (571)
+|+..+.||+|+||.||++. ..+++.+|+|.+....... ...+.+.+|++++++++|||++++++.+...+..++|||
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~-~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e 79 (256)
T cd08220 1 KYEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTK-DERLAAQNECQVLKLLSHPNIIEYYENFLEDKALMIVME 79 (256)
T ss_pred CceEEEEecccCceEEEEEEEcCCCcEEEEEEEecccccc-HHHHHHHHHHHHHhhCCCCchhheeeeEecCCEEEEEEe
Confidence 47888999999999999998 4578999999997643322 345779999999999999999999999999999999999
Q ss_pred ccCCCChhhhhccCCCccCCCHHHHhhhc
Q 044615 542 YLEMGSLAMNLSNDAAAEQFCWTKRMNAI 570 (571)
Q Consensus 542 ~~~~G~L~~~l~~~~~~~~l~w~~r~~ia 570 (571)
|+++|+|.+++.... ...+++.....++
T Consensus 80 ~~~~~~L~~~~~~~~-~~~~~~~~~~~~~ 107 (256)
T cd08220 80 YAPGGTLAEYIQKRC-NSLLDEDTILHFF 107 (256)
T ss_pred cCCCCCHHHHHHHhc-ccCCCHHHHHHHH
Confidence 999999999997543 2346676665543
No 182
>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr
Probab=99.19 E-value=7.8e-11 Score=118.19 Aligned_cols=98 Identities=23% Similarity=0.288 Sum_probs=75.9
Q ss_pred CeeeccCcceEEEEE-cCCCCEEEEEEccCCCCCchHhHHHHHHHHH-HHhhcCCCCcccEEEEEEeCCeeEEEEeccCC
Q 044615 468 HCIGNGGQGSVYKAK-LPTGEIVDVKKFHSPLPDEMACQQEFLNEVN-ALTKIRHRNIVKFYGFCSHALHSFVVYEYLEM 545 (571)
Q Consensus 468 ~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~Ei~-~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~ 545 (571)
+.||+|+||+||+|+ ..+|+.||+|++.+.........+++..|.. +++.++||||+++++++.+.+..|+||||+++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~ 80 (323)
T cd05575 1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTADKLYFVLDYVNG 80 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEEEeCCEEEEEEcCCCC
Confidence 468999999999999 4589999999997543222223445666655 46789999999999999999999999999999
Q ss_pred CChhhhhccCCCccCCCHHHHhh
Q 044615 546 GSLAMNLSNDAAAEQFCWTKRMN 568 (571)
Q Consensus 546 G~L~~~l~~~~~~~~l~w~~r~~ 568 (571)
|+|.+++.... .+.+.....
T Consensus 81 g~L~~~l~~~~---~~~~~~~~~ 100 (323)
T cd05575 81 GELFFHLQRER---SFPEPRARF 100 (323)
T ss_pred CCHHHHHHhcC---CCCHHHHHH
Confidence 99999987532 345544433
No 183
>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin
Probab=99.19 E-value=1.1e-10 Score=116.66 Aligned_cols=106 Identities=18% Similarity=0.214 Sum_probs=88.3
Q ss_pred CCCccCeeeccCcceEEEEEc-CCCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhcCCCCcccEEEEEEeCCeeEEEEe
Q 044615 463 NFDDGHCIGNGGQGSVYKAKL-PTGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKIRHRNIVKFYGFCSHALHSFVVYE 541 (571)
Q Consensus 463 ~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~e 541 (571)
+|+..+.||+|+||.||+|.. .+++.||+|.+...........+.+.+|++++++++||||+++++.+.+....|+|||
T Consensus 2 ~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e 81 (316)
T cd05574 2 HFKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPTLYASFQTETYLCLVMD 81 (316)
T ss_pred ceEEeeeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCCchhheeeeecCCEEEEEEE
Confidence 688889999999999999994 4689999999986544433456679999999999999999999999999999999999
Q ss_pred ccCCCChhhhhccCCCccCCCHHHHhhh
Q 044615 542 YLEMGSLAMNLSNDAAAEQFCWTKRMNA 569 (571)
Q Consensus 542 ~~~~G~L~~~l~~~~~~~~l~w~~r~~i 569 (571)
|+++|+|.+++.... ...+++.....+
T Consensus 82 ~~~~~~L~~~~~~~~-~~~l~~~~~~~~ 108 (316)
T cd05574 82 YCPGGELFRLLQRQP-GKCLSEEVARFY 108 (316)
T ss_pred ecCCCCHHHHHHhCC-CCccCHHHHHHH
Confidence 999999999987432 235666665544
No 184
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=99.19 E-value=9.7e-11 Score=128.34 Aligned_cols=105 Identities=21% Similarity=0.165 Sum_probs=87.4
Q ss_pred cCCCccCeeeccCcceEEEEEc-CCCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhcCCCCcccEEEEEEeCCeeEEEE
Q 044615 462 NNFDDGHCIGNGGQGSVYKAKL-PTGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKIRHRNIVKFYGFCSHALHSFVVY 540 (571)
Q Consensus 462 ~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~ 540 (571)
++|.+.+.||+|+||.||+|.. .+++.||||++.............+.+|+.+++.++||||+++++++......|+||
T Consensus 4 ~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lVm 83 (669)
T cd05610 4 EEFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLYYSLQSANNVYLVM 83 (669)
T ss_pred CCEEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCcCeEEEEEEECCEEEEEE
Confidence 5788999999999999999994 478999999997654444444577899999999999999999999999999999999
Q ss_pred eccCCCChhhhhccCCCccCCCHHHHhhh
Q 044615 541 EYLEMGSLAMNLSNDAAAEQFCWTKRMNA 569 (571)
Q Consensus 541 e~~~~G~L~~~l~~~~~~~~l~w~~r~~i 569 (571)
||+++|+|.++++..+ .+++.....|
T Consensus 84 Ey~~g~~L~~li~~~~---~l~~~~~~~i 109 (669)
T cd05610 84 EYLIGGDVKSLLHIYG---YFDEEMAVKY 109 (669)
T ss_pred eCCCCCCHHHHHHhcC---CCCHHHHHHH
Confidence 9999999999997432 3455544443
No 185
>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of
Probab=99.18 E-value=9.1e-11 Score=114.94 Aligned_cols=99 Identities=23% Similarity=0.253 Sum_probs=80.7
Q ss_pred eeccCcceEEEEE-cCCCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhcCCCCcccEEEEEEeCCeeEEEEeccCCCCh
Q 044615 470 IGNGGQGSVYKAK-LPTGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKIRHRNIVKFYGFCSHALHSFVVYEYLEMGSL 548 (571)
Q Consensus 470 lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~G~L 548 (571)
||+|+||+||+|. ..+|+.||+|.+.+.........+.+.+|++++++++||||+++++++...+..|+||||+++|+|
T Consensus 1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (277)
T cd05577 1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAYAFETKDDLCLVMTLMNGGDL 80 (277)
T ss_pred CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCCCCEeeeeeEEecCCeEEEEEecCCCCcH
Confidence 6899999999998 457999999998754332223345678899999999999999999999999999999999999999
Q ss_pred hhhhccCCCccCCCHHHHhhh
Q 044615 549 AMNLSNDAAAEQFCWTKRMNA 569 (571)
Q Consensus 549 ~~~l~~~~~~~~l~w~~r~~i 569 (571)
.+++..... ..+++.....+
T Consensus 81 ~~~l~~~~~-~~~~~~~~~~~ 100 (277)
T cd05577 81 KYHIYNVGE-PGFPEARAIFY 100 (277)
T ss_pred HHHHHHcCc-CCCCHHHHHHH
Confidence 999975432 34677666554
No 186
>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.
Probab=99.18 E-value=6.8e-11 Score=114.32 Aligned_cols=106 Identities=24% Similarity=0.324 Sum_probs=87.5
Q ss_pred CCCccCeeeccCcceEEEEE-cCCCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhcCCCCcccEEEEEEeCCeeEEEEe
Q 044615 463 NFDDGHCIGNGGQGSVYKAK-LPTGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKIRHRNIVKFYGFCSHALHSFVVYE 541 (571)
Q Consensus 463 ~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~e 541 (571)
+|+..+.||+|+||.||+|. ..+|..+|+|.+...... ....+.+.+|+.++++++||||+++++.+.+....|+|+|
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~~E~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e 79 (257)
T cd08225 1 RYEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMP-VKEKEASKKEVILLAKMKHPNIVTFFASFQENGRLFIVME 79 (257)
T ss_pred CceEEEEecCCCcceEEEEEEcCCCceEEEEEeeHhhcc-chhhHHHHHHHHHHHhCCCCChhhhhheeccCCeEEEEEe
Confidence 47788899999999999999 457889999998754322 1334678899999999999999999999999999999999
Q ss_pred ccCCCChhhhhccCCCccCCCHHHHhhhc
Q 044615 542 YLEMGSLAMNLSNDAAAEQFCWTKRMNAI 570 (571)
Q Consensus 542 ~~~~G~L~~~l~~~~~~~~l~w~~r~~ia 570 (571)
|+++++|.+++.+... ..++|..+..++
T Consensus 80 ~~~~~~L~~~~~~~~~-~~~~~~~~~~~~ 107 (257)
T cd08225 80 YCDGGDLMKRINRQRG-VLFSEDQILSWF 107 (257)
T ss_pred cCCCCcHHHHHHhccC-CCCCHHHHHHHH
Confidence 9999999999975432 357887776654
No 187
>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t
Probab=99.18 E-value=1.4e-10 Score=112.59 Aligned_cols=94 Identities=24% Similarity=0.375 Sum_probs=80.6
Q ss_pred cCCCccCeeeccCcceEEEEE-cCCCCEEEEEEccCCCCCc--hHhHHHHHHHHHHHhhcCCCCcccEEEEEEeCCeeEE
Q 044615 462 NNFDDGHCIGNGGQGSVYKAK-LPTGEIVDVKKFHSPLPDE--MACQQEFLNEVNALTKIRHRNIVKFYGFCSHALHSFV 538 (571)
Q Consensus 462 ~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~--~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~l 538 (571)
++|+..+.||+|+||.||+|. ..+++.||+|.+....... ....+.+.+|++++++++||||+++++++.+.+..|+
T Consensus 2 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~ 81 (263)
T cd06625 2 TNWRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCLRDDETLSI 81 (263)
T ss_pred CcccccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEccCCeEEE
Confidence 468899999999999999998 4578999999987543221 1234678999999999999999999999999999999
Q ss_pred EEeccCCCChhhhhccC
Q 044615 539 VYEYLEMGSLAMNLSND 555 (571)
Q Consensus 539 v~e~~~~G~L~~~l~~~ 555 (571)
||||+++|+|.+++...
T Consensus 82 v~e~~~~~~l~~~~~~~ 98 (263)
T cd06625 82 FMEYMPGGSVKDQLKAY 98 (263)
T ss_pred EEEECCCCcHHHHHHHh
Confidence 99999999999998753
No 188
>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops
Probab=99.18 E-value=1.5e-10 Score=111.84 Aligned_cols=103 Identities=24% Similarity=0.324 Sum_probs=84.9
Q ss_pred CCccCeeeccCcceEEEEEcC-CCCEEEEEEccCCCCC--chHhHHHHHHHHHHHhhcCCCCcccEEEEEEeCCeeEEEE
Q 044615 464 FDDGHCIGNGGQGSVYKAKLP-TGEIVDVKKFHSPLPD--EMACQQEFLNEVNALTKIRHRNIVKFYGFCSHALHSFVVY 540 (571)
Q Consensus 464 ~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~--~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~ 540 (571)
|+..+.||+|+||+||+|... +++.||+|.+...... .....+.+.+|++++++++||||+++++++.+....|+||
T Consensus 2 ~~~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~ 81 (258)
T cd06632 2 WRKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTEREEDNLYIFL 81 (258)
T ss_pred ccccceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeEecCCeEEEEE
Confidence 677789999999999999954 8999999998654322 1233567999999999999999999999999999999999
Q ss_pred eccCCCChhhhhccCCCccCCCHHHHhhh
Q 044615 541 EYLEMGSLAMNLSNDAAAEQFCWTKRMNA 569 (571)
Q Consensus 541 e~~~~G~L~~~l~~~~~~~~l~w~~r~~i 569 (571)
||+++++|.+++.+.. .++|.....+
T Consensus 82 e~~~~~~L~~~~~~~~---~~~~~~~~~~ 107 (258)
T cd06632 82 ELVPGGSLAKLLKKYG---SFPEPVIRLY 107 (258)
T ss_pred EecCCCcHHHHHHhcC---CCCHHHHHHH
Confidence 9999999999997542 3666665544
No 189
>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI
Probab=99.18 E-value=4.6e-11 Score=117.55 Aligned_cols=105 Identities=22% Similarity=0.370 Sum_probs=86.7
Q ss_pred cCCCccCeeeccCcceEEEEEc-CCCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhcCCCCcccEEEEEEeCCeeEEEE
Q 044615 462 NNFDDGHCIGNGGQGSVYKAKL-PTGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKIRHRNIVKFYGFCSHALHSFVVY 540 (571)
Q Consensus 462 ~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~ 540 (571)
++|+..+.||+|+||.||+|.. .+++.||+|.+....... ...+.+.+|++++++++||||+++++++.+.+..|+||
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 79 (286)
T cd07846 1 EKYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDK-MVKKIAMREIRMLKQLRHENLVNLIEVFRRKKRLYLVF 79 (286)
T ss_pred CceeEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcc-hhhHHHHHHHHHHHhcCCcchhhHHHhcccCCeEEEEE
Confidence 3688889999999999999995 468999999987543322 33567889999999999999999999999999999999
Q ss_pred eccCCCChhhhhccCCCccCCCHHHHhhhc
Q 044615 541 EYLEMGSLAMNLSNDAAAEQFCWTKRMNAI 570 (571)
Q Consensus 541 e~~~~G~L~~~l~~~~~~~~l~w~~r~~ia 570 (571)
||+++++|.++.... ..++|.+...|+
T Consensus 80 e~~~~~~l~~~~~~~---~~~~~~~~~~~~ 106 (286)
T cd07846 80 EFVDHTVLDDLEKYP---NGLDESRVRKYL 106 (286)
T ss_pred ecCCccHHHHHHhcc---CCCCHHHHHHHH
Confidence 999999998877643 237788777654
No 190
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=99.18 E-value=7.8e-11 Score=124.49 Aligned_cols=104 Identities=15% Similarity=0.038 Sum_probs=82.8
Q ss_pred CCCccCeeeccCcceEEEEE-cCC-CCEEEEEEccCCCCCchHhHHHHHHHHHHHhhcCCCCcccEEEEEEeCCeeEEEE
Q 044615 463 NFDDGHCIGNGGQGSVYKAK-LPT-GEIVDVKKFHSPLPDEMACQQEFLNEVNALTKIRHRNIVKFYGFCSHALHSFVVY 540 (571)
Q Consensus 463 ~~~~~~~lg~G~~g~V~~~~-~~~-~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~ 540 (571)
.|...+.||+|+||.||+|. ..+ ++.||+|.+.... ......+.+|+.+++.++|||||++++++...+..|+||
T Consensus 68 ~y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~~---~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~ 144 (478)
T PTZ00267 68 MYVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLND---ERQAAYARSELHCLAACDHFGIVKHFDDFKSDDKLLLIM 144 (478)
T ss_pred eEEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccCC---HHHHHHHHHHHHHHHhCCCCCEeEEEEEEEECCEEEEEE
Confidence 38889999999999999998 344 6788999875432 233456888999999999999999999999999999999
Q ss_pred eccCCCChhhhhccCC-CccCCCHHHHhhh
Q 044615 541 EYLEMGSLAMNLSNDA-AAEQFCWTKRMNA 569 (571)
Q Consensus 541 e~~~~G~L~~~l~~~~-~~~~l~w~~r~~i 569 (571)
||+++|+|.+++++.. ...++++.+...+
T Consensus 145 E~~~gg~L~~~l~~~~~~~~~l~~~~~~~i 174 (478)
T PTZ00267 145 EYGSGGDLNKQIKQRLKEHLPFQEYEVGLL 174 (478)
T ss_pred ECCCCCCHHHHHHHHHhccCCCCHHHHHHH
Confidence 9999999999886431 2234565554433
No 191
>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re
Probab=99.18 E-value=1.6e-10 Score=112.45 Aligned_cols=105 Identities=21% Similarity=0.277 Sum_probs=82.6
Q ss_pred cCCCccCeeeccCcceEEEEE-cCCCCEEEEEEccCCCC--CchHhHHHHHHHHHHHhhcCCCCcccEEEEEEeC--Cee
Q 044615 462 NNFDDGHCIGNGGQGSVYKAK-LPTGEIVDVKKFHSPLP--DEMACQQEFLNEVNALTKIRHRNIVKFYGFCSHA--LHS 536 (571)
Q Consensus 462 ~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~--~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~--~~~ 536 (571)
.+|+..+.||+|+||.||.|. ..++..||+|.+..... ......+.+.+|+.++++++||||+++++++.+. ...
T Consensus 2 ~~~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (265)
T cd06652 2 TNWRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRDPMERTL 81 (265)
T ss_pred CcceEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEeccCCCceE
Confidence 468889999999999999998 45789999999864321 2223456789999999999999999999998764 568
Q ss_pred EEEEeccCCCChhhhhccCCCccCCCHHHHhhh
Q 044615 537 FVVYEYLEMGSLAMNLSNDAAAEQFCWTKRMNA 569 (571)
Q Consensus 537 ~lv~e~~~~G~L~~~l~~~~~~~~l~w~~r~~i 569 (571)
++||||+++|+|.+++.+.. .+++...+++
T Consensus 82 ~~v~e~~~~~~L~~~l~~~~---~~~~~~~~~~ 111 (265)
T cd06652 82 SIFMEHMPGGSIKDQLKSYG---ALTENVTRKY 111 (265)
T ss_pred EEEEEecCCCcHHHHHHHcC---CCCHHHHHHH
Confidence 89999999999999997542 2444444433
No 192
>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85. Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.
Probab=99.18 E-value=1.2e-10 Score=114.42 Aligned_cols=105 Identities=22% Similarity=0.380 Sum_probs=86.7
Q ss_pred CCCccCeeeccCcceEEEEEc-CCCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhcCCCCcccEEEEEEeCCeeEEEEe
Q 044615 463 NFDDGHCIGNGGQGSVYKAKL-PTGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKIRHRNIVKFYGFCSHALHSFVVYE 541 (571)
Q Consensus 463 ~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~e 541 (571)
+|+..+.||+|++|.||+|+. .+|+.||||.+...... ...+.+.+|++++++++||||+++++++.+.+..++|||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~--~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 78 (284)
T cd07836 1 NFKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEE--GTPSTAIREISLMKELKHENIVRLHDVIHTENKLMLVFE 78 (284)
T ss_pred CceEeeeeccCCceEEEEEEECCCCeEEEEEEecccccc--cchHHHHHHHHHHHhhcCCCEeeeeeeEeeCCcEEEEEe
Confidence 478889999999999999995 47899999998754322 224567889999999999999999999999999999999
Q ss_pred ccCCCChhhhhccCCCccCCCHHHHhhhc
Q 044615 542 YLEMGSLAMNLSNDAAAEQFCWTKRMNAI 570 (571)
Q Consensus 542 ~~~~G~L~~~l~~~~~~~~l~w~~r~~ia 570 (571)
|+++ +|.+++........++|....+++
T Consensus 79 ~~~~-~l~~~~~~~~~~~~~~~~~~~~~~ 106 (284)
T cd07836 79 YMDK-DLKKYMDTHGVRGALDPNTVKSFT 106 (284)
T ss_pred cCCc-cHHHHHHhcCCCCCcCHHHHHHHH
Confidence 9985 899988765444467888776654
No 193
>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta
Probab=99.18 E-value=1.1e-10 Score=115.05 Aligned_cols=92 Identities=24% Similarity=0.372 Sum_probs=77.7
Q ss_pred ccCCCccCeeeccCcceEEEEEcC------CCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhcCCCCcccEEEEEEeCC
Q 044615 461 TNNFDDGHCIGNGGQGSVYKAKLP------TGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKIRHRNIVKFYGFCSHAL 534 (571)
Q Consensus 461 ~~~~~~~~~lg~G~~g~V~~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~ 534 (571)
.++|++.+.||+|+||.||+|..+ .+..||+|.+.... .......+.+|+.++++++||||+++++++.+++
T Consensus 5 ~~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~ 82 (288)
T cd05061 5 REKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESA--SLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQ 82 (288)
T ss_pred HHHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcC--CHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCC
Confidence 456889999999999999999632 24579999986442 2233456889999999999999999999999999
Q ss_pred eeEEEEeccCCCChhhhhcc
Q 044615 535 HSFVVYEYLEMGSLAMNLSN 554 (571)
Q Consensus 535 ~~~lv~e~~~~G~L~~~l~~ 554 (571)
..|+||||+++|+|.+++++
T Consensus 83 ~~~lv~e~~~~g~L~~~l~~ 102 (288)
T cd05061 83 PTLVVMELMAHGDLKSYLRS 102 (288)
T ss_pred CcEEEEeCCCCCCHHHHHHH
Confidence 99999999999999999975
No 194
>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,
Probab=99.18 E-value=9.3e-11 Score=117.73 Aligned_cols=98 Identities=21% Similarity=0.275 Sum_probs=76.4
Q ss_pred CeeeccCcceEEEEE-cCCCCEEEEEEccCCCCCchHhHHHHHHHHH-HHhhcCCCCcccEEEEEEeCCeeEEEEeccCC
Q 044615 468 HCIGNGGQGSVYKAK-LPTGEIVDVKKFHSPLPDEMACQQEFLNEVN-ALTKIRHRNIVKFYGFCSHALHSFVVYEYLEM 545 (571)
Q Consensus 468 ~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~Ei~-~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~ 545 (571)
+.||+|+||+||+|+ ..+|+.||+|++.+..........++.+|.. +++.++||||+++++++...+..|+||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~~~~~~lv~e~~~~ 80 (325)
T cd05604 1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTTEKLYFVLDFVNG 80 (325)
T ss_pred CceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEEecCCEEEEEEcCCCC
Confidence 368999999999998 5589999999997543222233455667765 46789999999999999999999999999999
Q ss_pred CChhhhhccCCCccCCCHHHHhh
Q 044615 546 GSLAMNLSNDAAAEQFCWTKRMN 568 (571)
Q Consensus 546 G~L~~~l~~~~~~~~l~w~~r~~ 568 (571)
|+|.+++.... .+++.+...
T Consensus 81 ~~L~~~l~~~~---~~~~~~~~~ 100 (325)
T cd05604 81 GELFFHLQRER---SFPEPRARF 100 (325)
T ss_pred CCHHHHHHHcC---CCCHHHHHH
Confidence 99999887432 345554443
No 195
>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp
Probab=99.18 E-value=8.9e-11 Score=117.34 Aligned_cols=88 Identities=23% Similarity=0.300 Sum_probs=71.6
Q ss_pred CeeeccCcceEEEEE-cCCCCEEEEEEccCCCCCchHhHHHHHHHHHHHhh-cCCCCcccEEEEEEeCCeeEEEEeccCC
Q 044615 468 HCIGNGGQGSVYKAK-LPTGEIVDVKKFHSPLPDEMACQQEFLNEVNALTK-IRHRNIVKFYGFCSHALHSFVVYEYLEM 545 (571)
Q Consensus 468 ~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~-l~H~niv~l~~~~~~~~~~~lv~e~~~~ 545 (571)
+.||+|+||.||+|. ..+++.||||++...........+.+..|..++.. .+||||+++++++...+..|+||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~~~~~lv~e~~~g 80 (316)
T cd05592 1 KVLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQTKEHLFFVMEYLNG 80 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 368999999999999 45788999999975432222334556677777765 4899999999999999999999999999
Q ss_pred CChhhhhccC
Q 044615 546 GSLAMNLSND 555 (571)
Q Consensus 546 G~L~~~l~~~ 555 (571)
|+|.+++...
T Consensus 81 g~L~~~~~~~ 90 (316)
T cd05592 81 GDLMFHIQSS 90 (316)
T ss_pred CcHHHHHHHc
Confidence 9999998754
No 196
>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is
Probab=99.18 E-value=1.1e-10 Score=115.73 Aligned_cols=105 Identities=22% Similarity=0.358 Sum_probs=86.4
Q ss_pred CCCccCeeeccCcceEEEEE-cCCCCEEEEEEccCCCCC--chHhHHHHHHHHHHHhhcCCCCcccEEEEEEeCCeeEEE
Q 044615 463 NFDDGHCIGNGGQGSVYKAK-LPTGEIVDVKKFHSPLPD--EMACQQEFLNEVNALTKIRHRNIVKFYGFCSHALHSFVV 539 (571)
Q Consensus 463 ~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~--~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv 539 (571)
+|+..+.||+|+||.||+|. ..+++.||||.+...... .......+..|++++++++||||+++++++.+.+..|+|
T Consensus 1 ~y~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv 80 (298)
T cd07841 1 RYEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVFGHKSNINLV 80 (298)
T ss_pred CceeeeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhheeecCCEEEEE
Confidence 37778899999999999999 457899999999765433 112245678899999999999999999999999999999
Q ss_pred EeccCCCChhhhhccCCCccCCCHHHHhhhc
Q 044615 540 YEYLEMGSLAMNLSNDAAAEQFCWTKRMNAI 570 (571)
Q Consensus 540 ~e~~~~G~L~~~l~~~~~~~~l~w~~r~~ia 570 (571)
|||+ +|+|.+++.... ..++|.....++
T Consensus 81 ~e~~-~~~L~~~i~~~~--~~~~~~~~~~~~ 108 (298)
T cd07841 81 FEFM-ETDLEKVIKDKS--IVLTPADIKSYM 108 (298)
T ss_pred Eccc-CCCHHHHHhccC--CCCCHHHHHHHH
Confidence 9999 899999997543 257888777664
No 197
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=99.18 E-value=1.1e-10 Score=116.00 Aligned_cols=106 Identities=23% Similarity=0.331 Sum_probs=86.3
Q ss_pred cCCCccCeeeccCcceEEEEEc------CCCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhc-CCCCcccEEEEEEeCC
Q 044615 462 NNFDDGHCIGNGGQGSVYKAKL------PTGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKI-RHRNIVKFYGFCSHAL 534 (571)
Q Consensus 462 ~~~~~~~~lg~G~~g~V~~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l-~H~niv~l~~~~~~~~ 534 (571)
++|...+.||+|+||.||+|.. .++..||||.+..... ....+.+.+|+++++++ +||||+++++++...+
T Consensus 35 ~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 112 (302)
T cd05055 35 NNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAH--SSEREALMSELKIMSHLGNHENIVNLLGACTIGG 112 (302)
T ss_pred HHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCC--hHHHHHHHHHHHHHHhccCCCCcceEEEEEecCC
Confidence 4588899999999999999962 1355799999875432 23356799999999999 8999999999999999
Q ss_pred eeEEEEeccCCCChhhhhccCCCccCCCHHHHhhhc
Q 044615 535 HSFVVYEYLEMGSLAMNLSNDAAAEQFCWTKRMNAI 570 (571)
Q Consensus 535 ~~~lv~e~~~~G~L~~~l~~~~~~~~l~w~~r~~ia 570 (571)
..|+||||+++|+|.+++++... ..++|.+...|+
T Consensus 113 ~~~lv~e~~~~~~L~~~i~~~~~-~~l~~~~~~~i~ 147 (302)
T cd05055 113 PILVITEYCCYGDLLNFLRRKRE-SFLTLEDLLSFS 147 (302)
T ss_pred ceEEEEEcCCCCcHHHHHHhCCC-CCCCHHHHHHHH
Confidence 99999999999999999975332 247888777654
No 198
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=99.18 E-value=1.4e-10 Score=114.72 Aligned_cols=102 Identities=23% Similarity=0.316 Sum_probs=85.9
Q ss_pred cCCCccCeeeccCcceEEEEE-cCCCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhcCCCCcccEEEEEEeCCeeEEEE
Q 044615 462 NNFDDGHCIGNGGQGSVYKAK-LPTGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKIRHRNIVKFYGFCSHALHSFVVY 540 (571)
Q Consensus 462 ~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~ 540 (571)
..|+..+.||+|+||.||+|. ..+++.||+|.+...... ..+.+.+|+.+++.++|||++++++++......|+||
T Consensus 20 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~---~~~~~~~e~~~l~~~~h~~v~~~~~~~~~~~~~~lv~ 96 (296)
T cd06654 20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQP---KKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVM 96 (296)
T ss_pred cceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCCcc---hHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEee
Confidence 468888999999999999998 457899999998754432 2467889999999999999999999999999999999
Q ss_pred eccCCCChhhhhccCCCccCCCHHHHhhhc
Q 044615 541 EYLEMGSLAMNLSNDAAAEQFCWTKRMNAI 570 (571)
Q Consensus 541 e~~~~G~L~~~l~~~~~~~~l~w~~r~~ia 570 (571)
||+++|+|.+++.+. .++|.+...++
T Consensus 97 e~~~~~~L~~~~~~~----~~~~~~~~~i~ 122 (296)
T cd06654 97 EYLAGGSLTDVVTET----CMDEGQIAAVC 122 (296)
T ss_pred cccCCCCHHHHHHhc----CCCHHHHHHHH
Confidence 999999999998642 35666666543
No 199
>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati
Probab=99.18 E-value=1.7e-10 Score=111.44 Aligned_cols=90 Identities=21% Similarity=0.343 Sum_probs=78.6
Q ss_pred CCCccCeeeccCcceEEEEE-cCCCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhcCCCCcccEEEEEEeCCeeEEEEe
Q 044615 463 NFDDGHCIGNGGQGSVYKAK-LPTGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKIRHRNIVKFYGFCSHALHSFVVYE 541 (571)
Q Consensus 463 ~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~e 541 (571)
+|+..+.||+|+||.||++. ..+++.+|+|.+..... ....+.+.+|+.++++++||||+++++++.+.+..|+|||
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 78 (255)
T cd08219 1 QYNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKS--SSAVEDSRKEAVLLAKMKHPNIVAFKESFEADGHLYIVME 78 (255)
T ss_pred CceEEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCcc--hHHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEe
Confidence 47888999999999999999 45789999999864332 2345678899999999999999999999999999999999
Q ss_pred ccCCCChhhhhcc
Q 044615 542 YLEMGSLAMNLSN 554 (571)
Q Consensus 542 ~~~~G~L~~~l~~ 554 (571)
|+++|+|.+++..
T Consensus 79 ~~~~~~l~~~~~~ 91 (255)
T cd08219 79 YCDGGDLMQKIKL 91 (255)
T ss_pred eCCCCcHHHHHHh
Confidence 9999999999864
No 200
>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp
Probab=99.18 E-value=6.4e-11 Score=119.83 Aligned_cols=91 Identities=25% Similarity=0.434 Sum_probs=75.3
Q ss_pred cCCCccCeeeccCcceEEEEEc------CCCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhc-CCCCcccEEEEEEeC-
Q 044615 462 NNFDDGHCIGNGGQGSVYKAKL------PTGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKI-RHRNIVKFYGFCSHA- 533 (571)
Q Consensus 462 ~~~~~~~~lg~G~~g~V~~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l-~H~niv~l~~~~~~~- 533 (571)
++|++.+.||+|+||.||+|.. .+++.||||.++.... ....+.+.+|+.++.++ +|||||++++++...
T Consensus 7 ~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~ 84 (343)
T cd05103 7 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGAT--HSEHRALMSELKILIHIGHHLNVVNLLGACTKPG 84 (343)
T ss_pred hHhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCCC--hHHHHHHHHHHHHHHhccCCccHhhhcceeecCC
Confidence 4688999999999999999962 3578899999975432 22346788999999999 789999999988654
Q ss_pred CeeEEEEeccCCCChhhhhcc
Q 044615 534 LHSFVVYEYLEMGSLAMNLSN 554 (571)
Q Consensus 534 ~~~~lv~e~~~~G~L~~~l~~ 554 (571)
...++||||+++|+|.++++.
T Consensus 85 ~~~~lv~ey~~~g~L~~~i~~ 105 (343)
T cd05103 85 GPLMVIVEFCKFGNLSNYLRS 105 (343)
T ss_pred CceEEEEeccCCCcHHHHHHh
Confidence 567899999999999999974
No 201
>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.18 E-value=8.7e-12 Score=124.77 Aligned_cols=89 Identities=30% Similarity=0.419 Sum_probs=79.1
Q ss_pred CCccCeeeccCcceEEEEE-cCCCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhcCCCCcccEEEEEEeCCeeEEEEec
Q 044615 464 FDDGHCIGNGGQGSVYKAK-LPTGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKIRHRNIVKFYGFCSHALHSFVVYEY 542 (571)
Q Consensus 464 ~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 542 (571)
|...+.||.|+||.||.|+ .++.+.||||++.-........++++..|++.+.+++|||+|.+.|+|....+.|+||||
T Consensus 28 f~dLrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPntieYkgCyLre~TaWLVMEY 107 (948)
T KOG0577|consen 28 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTIEYKGCYLREHTAWLVMEY 107 (948)
T ss_pred HHHHHHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCcccccceeeccchHHHHHHH
Confidence 5566789999999999999 668899999999877766667789999999999999999999999999999999999999
Q ss_pred cCCCChhhhhc
Q 044615 543 LEMGSLAMNLS 553 (571)
Q Consensus 543 ~~~G~L~~~l~ 553 (571)
|-| +-.|.+.
T Consensus 108 ClG-SAsDlle 117 (948)
T KOG0577|consen 108 CLG-SASDLLE 117 (948)
T ss_pred Hhc-cHHHHHH
Confidence 975 7777664
No 202
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=99.18 E-value=1e-10 Score=128.71 Aligned_cols=110 Identities=21% Similarity=0.282 Sum_probs=87.1
Q ss_pred HccCCCccCeeeccCcceEEEEE-cCCCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhcCCCCcccEEEEEEe--CCee
Q 044615 460 ATNNFDDGHCIGNGGQGSVYKAK-LPTGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKIRHRNIVKFYGFCSH--ALHS 536 (571)
Q Consensus 460 ~~~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~--~~~~ 536 (571)
..++|++.+.||+|+||.||+|. ..++..||+|.+....... .....|.+|+.++++++|||||+++++|.. ...+
T Consensus 11 ~l~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e-~~~~~~~~EI~IL~~L~HPNIVrl~d~f~de~~~~l 89 (1021)
T PTZ00266 11 RLNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKE-REKSQLVIEVNVMRELKHKNIVRYIDRFLNKANQKL 89 (1021)
T ss_pred ccCCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEeccccCH-HHHHHHHHHHHHHHHcCCCCcCeEEEEEEecCCCEE
Confidence 34579999999999999999999 4578889999987554332 345679999999999999999999998854 4578
Q ss_pred EEEEeccCCCChhhhhccCC-CccCCCHHHHhhhc
Q 044615 537 FVVYEYLEMGSLAMNLSNDA-AAEQFCWTKRMNAI 570 (571)
Q Consensus 537 ~lv~e~~~~G~L~~~l~~~~-~~~~l~w~~r~~ia 570 (571)
|+||||+++|+|.++|.... ....++|...+.|+
T Consensus 90 yIVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia 124 (1021)
T PTZ00266 90 YILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDIT 124 (1021)
T ss_pred EEEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHH
Confidence 99999999999999997532 12346666655543
No 203
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.18 E-value=1.2e-10 Score=116.08 Aligned_cols=107 Identities=23% Similarity=0.368 Sum_probs=86.4
Q ss_pred cCCCccCeeeccCcceEEEEEcC--------CCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhc-CCCCcccEEEEEEe
Q 044615 462 NNFDDGHCIGNGGQGSVYKAKLP--------TGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKI-RHRNIVKFYGFCSH 532 (571)
Q Consensus 462 ~~~~~~~~lg~G~~g~V~~~~~~--------~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l-~H~niv~l~~~~~~ 532 (571)
++|.+.+.||+|+||.||+|... ++..+|+|.+..... .....++.+|++++.++ +||||+++++++..
T Consensus 18 ~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~--~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~ 95 (307)
T cd05098 18 DRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDAT--EKDLSDLISEMEMMKMIGKHKNIINLLGACTQ 95 (307)
T ss_pred HHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCC--hHHHHHHHHHHHHHHHhcCCCCEeeEEEEEec
Confidence 45889999999999999999731 235799999975422 23356788999999999 89999999999999
Q ss_pred CCeeEEEEeccCCCChhhhhccCCC-------------ccCCCHHHHhhhc
Q 044615 533 ALHSFVVYEYLEMGSLAMNLSNDAA-------------AEQFCWTKRMNAI 570 (571)
Q Consensus 533 ~~~~~lv~e~~~~G~L~~~l~~~~~-------------~~~l~w~~r~~ia 570 (571)
.+..|+||||+++|+|.+++..... ...++|.++++|+
T Consensus 96 ~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 146 (307)
T cd05098 96 DGPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCA 146 (307)
T ss_pred CCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHH
Confidence 9999999999999999999975422 1357888777764
No 204
>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a
Probab=99.18 E-value=1.2e-10 Score=114.48 Aligned_cols=104 Identities=24% Similarity=0.357 Sum_probs=84.7
Q ss_pred CCCccCeeeccCcceEEEEEc-----CCCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhcCCCCcccEEEEEEeC--Ce
Q 044615 463 NFDDGHCIGNGGQGSVYKAKL-----PTGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKIRHRNIVKFYGFCSHA--LH 535 (571)
Q Consensus 463 ~~~~~~~lg~G~~g~V~~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~--~~ 535 (571)
.|++.+.||+|+||.||.+.. .++..||+|.+..... ....+.+.+|++++++++||||+++++++... ..
T Consensus 5 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 82 (284)
T cd05079 5 FLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESG--GNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNG 82 (284)
T ss_pred hhhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCcccc--HHHHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCCc
Confidence 477889999999999999973 3578899999875432 23356799999999999999999999999775 56
Q ss_pred eEEEEeccCCCChhhhhccCCCccCCCHHHHhhhc
Q 044615 536 SFVVYEYLEMGSLAMNLSNDAAAEQFCWTKRMNAI 570 (571)
Q Consensus 536 ~~lv~e~~~~G~L~~~l~~~~~~~~l~w~~r~~ia 570 (571)
.++||||+++|+|.+++.+.. ..++|..++.++
T Consensus 83 ~~lv~e~~~g~~L~~~l~~~~--~~~~~~~~~~i~ 115 (284)
T cd05079 83 IKLIMEFLPSGSLKEYLPRNK--NKINLKQQLKYA 115 (284)
T ss_pred eEEEEEccCCCCHHHHHHhcc--CCCCHHHHHHHH
Confidence 899999999999999996442 257888777664
No 205
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=99.17 E-value=1.1e-10 Score=115.30 Aligned_cols=104 Identities=19% Similarity=0.238 Sum_probs=86.6
Q ss_pred cCCCccCeeeccCcceEEEEEc-CCCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhcCCCCcccEEEEEEeCCeeEEEE
Q 044615 462 NNFDDGHCIGNGGQGSVYKAKL-PTGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKIRHRNIVKFYGFCSHALHSFVVY 540 (571)
Q Consensus 462 ~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~ 540 (571)
+.|++.+.||+|+||.||+|+. .++..+|+|.+.... ....+.+.+|+++++.++||||+++++++......|+||
T Consensus 12 ~~y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 88 (292)
T cd06644 12 EVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETKS---EEELEDYMVEIEILATCNHPYIVKLLGAFYWDGKLWIMI 88 (292)
T ss_pred hhhhhhheecCCCCeEEEEEEECCCCceEEEEEeccCC---HHHHHHHHHHHHHHHhCCCCcEeeeEEEEEeCCeEEEEE
Confidence 5688999999999999999994 578999999986532 334677899999999999999999999999999999999
Q ss_pred eccCCCChhhhhccCCCccCCCHHHHhhhc
Q 044615 541 EYLEMGSLAMNLSNDAAAEQFCWTKRMNAI 570 (571)
Q Consensus 541 e~~~~G~L~~~l~~~~~~~~l~w~~r~~ia 570 (571)
||+++|+|..++.+... .++|.....++
T Consensus 89 e~~~~~~l~~~~~~~~~--~l~~~~~~~~~ 116 (292)
T cd06644 89 EFCPGGAVDAIMLELDR--GLTEPQIQVIC 116 (292)
T ss_pred ecCCCCcHHHHHHhhcC--CCCHHHHHHHH
Confidence 99999999888764332 46676665543
No 206
>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut
Probab=99.17 E-value=1.4e-10 Score=113.94 Aligned_cols=105 Identities=27% Similarity=0.380 Sum_probs=86.1
Q ss_pred cCCCccCeeeccCcceEEEEEcC-----CCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhcCCCCcccEEEEEEe--CC
Q 044615 462 NNFDDGHCIGNGGQGSVYKAKLP-----TGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKIRHRNIVKFYGFCSH--AL 534 (571)
Q Consensus 462 ~~~~~~~~lg~G~~g~V~~~~~~-----~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~--~~ 534 (571)
+.|+..+.||+|+||.||+|... ++..+|||.+...... ...+.|.+|++++++++||||+++++++.. ..
T Consensus 4 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~--~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~~~~~ 81 (284)
T cd05038 4 RHLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEE--QHRSDFEREIEILRTLDHENIVKYKGVCEKPGGR 81 (284)
T ss_pred hhchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccch--HHHHHHHHHHHHHHhCCCCChheEEeeeecCCCC
Confidence 35777889999999999999842 4788999999755432 345789999999999999999999999987 55
Q ss_pred eeEEEEeccCCCChhhhhccCCCccCCCHHHHhhhc
Q 044615 535 HSFVVYEYLEMGSLAMNLSNDAAAEQFCWTKRMNAI 570 (571)
Q Consensus 535 ~~~lv~e~~~~G~L~~~l~~~~~~~~l~w~~r~~ia 570 (571)
..++||||+++|+|.+++..... .++|..++.++
T Consensus 82 ~~~lv~e~~~~~~l~~~l~~~~~--~~~~~~~~~~~ 115 (284)
T cd05038 82 SLRLIMEYLPSGSLRDYLQRHRD--QINLKRLLLFS 115 (284)
T ss_pred ceEEEEecCCCCCHHHHHHhCcc--ccCHHHHHHHH
Confidence 78999999999999999975432 47887777654
No 207
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=99.17 E-value=6.2e-11 Score=120.50 Aligned_cols=87 Identities=28% Similarity=0.443 Sum_probs=75.0
Q ss_pred CCCccCeeeccCcceEEEEE-cCCCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhcCCCCcccEEEEEEeCCeeEEEEe
Q 044615 463 NFDDGHCIGNGGQGSVYKAK-LPTGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKIRHRNIVKFYGFCSHALHSFVVYE 541 (571)
Q Consensus 463 ~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~e 541 (571)
+|+..+.||+|+||.||+|. ..+++.||||++.... .....+.+.+|++++++++||||+++++++.+.+..|+|||
T Consensus 75 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 152 (353)
T PLN00034 75 ELERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNH--EDTVRRQICREIEILRDVNHPNVVKCHDMFDHNGEIQVLLE 152 (353)
T ss_pred HHhhhhhccCCCCeEEEEEEECCCCCEEEEEEEecCC--cHHHHHHHHHHHHHHHhCCCCCcceeeeEeccCCeEEEEEe
Confidence 46677889999999999999 4579999999986432 22345679999999999999999999999999999999999
Q ss_pred ccCCCChhhh
Q 044615 542 YLEMGSLAMN 551 (571)
Q Consensus 542 ~~~~G~L~~~ 551 (571)
|+++|+|.+.
T Consensus 153 ~~~~~~L~~~ 162 (353)
T PLN00034 153 FMDGGSLEGT 162 (353)
T ss_pred cCCCCccccc
Confidence 9999998654
No 208
>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.17 E-value=9.1e-12 Score=120.90 Aligned_cols=92 Identities=24% Similarity=0.369 Sum_probs=81.9
Q ss_pred CCCccCeeeccCcceEEEEE-cCCCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhcCCCCcccEEEEEEeCCeeEEEEe
Q 044615 463 NFDDGHCIGNGGQGSVYKAK-LPTGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKIRHRNIVKFYGFCSHALHSFVVYE 541 (571)
Q Consensus 463 ~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~e 541 (571)
.|...+.||+|+||.||+|. .++++.||+|++..+...+ ..++..+|+.++.+++||||.++||.|..+..++++||
T Consensus 14 ~~~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~~d--eIediqqei~~Ls~~~~~~it~yygsyl~g~~LwiiMe 91 (467)
T KOG0201|consen 14 LYTKLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEAED--EIEDIQQEISVLSQCDSPNITEYYGSYLKGTKLWIIME 91 (467)
T ss_pred ccccchhccccccceeeeeeeccccceEEEEEechhhcch--hhHHHHHHHHHHHhcCcchHHhhhhheeecccHHHHHH
Confidence 47777899999999999999 6789999999998765443 36788999999999999999999999999999999999
Q ss_pred ccCCCChhhhhccCC
Q 044615 542 YLEMGSLAMNLSNDA 556 (571)
Q Consensus 542 ~~~~G~L~~~l~~~~ 556 (571)
||.||++.+.++...
T Consensus 92 y~~gGsv~~lL~~~~ 106 (467)
T KOG0201|consen 92 YCGGGSVLDLLKSGN 106 (467)
T ss_pred HhcCcchhhhhccCC
Confidence 999999999998543
No 209
>KOG1259 consensus Nischarin, modulator of integrin alpha5 subunit action [Signal transduction mechanisms; Cytoskeleton]
Probab=99.17 E-value=5.9e-12 Score=116.16 Aligned_cols=131 Identities=25% Similarity=0.314 Sum_probs=78.6
Q ss_pred CCCcEEeCccCcCcCCCChhhhCCCCCCEEEcccCccccccchhhccCCCCCEEEcCCccCccCcchhhhcccCCCEEEc
Q 044615 218 SSLIQLTLNNNELSGQLSPELGSLIQLEYLDLSANTFHKSIPESLSNLVKLHYLNLSNNQFSQKIPNKIEKLIHLSELDL 297 (571)
Q Consensus 218 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L 297 (571)
..|+++||++|.++ .+.....-+|.++.|++++|.+... ..+..+++|+.||||+|.++. +..+-..+.+++.|.|
T Consensus 284 q~LtelDLS~N~I~-~iDESvKL~Pkir~L~lS~N~i~~v--~nLa~L~~L~~LDLS~N~Ls~-~~Gwh~KLGNIKtL~L 359 (490)
T KOG1259|consen 284 QELTELDLSGNLIT-QIDESVKLAPKLRRLILSQNRIRTV--QNLAELPQLQLLDLSGNLLAE-CVGWHLKLGNIKTLKL 359 (490)
T ss_pred hhhhhccccccchh-hhhhhhhhccceeEEeccccceeee--hhhhhcccceEeecccchhHh-hhhhHhhhcCEeeeeh
Confidence 45566666666655 3444455556666666666666432 336666666667777666652 3334445666677777
Q ss_pred cCCcCCcccchhccCCCCCCEEEccCCcCccc-cccccccCCCCCEEECcCCcCcccC
Q 044615 298 SHNIFREEIPSQICSMQSLEKLNLSHNNLSGS-IPRCFEEMHWLSCIDISYNALQGLI 354 (571)
Q Consensus 298 s~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~-~p~~~~~l~~L~~L~ls~N~l~~~~ 354 (571)
++|.+.. -+.++.+-+|..||+++|+|... ....+.++|-|+.+.|.+|++.+.+
T Consensus 360 a~N~iE~--LSGL~KLYSLvnLDl~~N~Ie~ldeV~~IG~LPCLE~l~L~~NPl~~~v 415 (490)
T KOG1259|consen 360 AQNKIET--LSGLRKLYSLVNLDLSSNQIEELDEVNHIGNLPCLETLRLTGNPLAGSV 415 (490)
T ss_pred hhhhHhh--hhhhHhhhhheeccccccchhhHHHhcccccccHHHHHhhcCCCccccc
Confidence 7776632 23355666677777777776532 1235566777777777777776654
No 210
>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity. Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....
Probab=99.17 E-value=5.3e-11 Score=115.28 Aligned_cols=103 Identities=28% Similarity=0.408 Sum_probs=83.4
Q ss_pred CCccCeeeccCcceEEEEEc-CCCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhcCCCCcccEEEEEEeCCeeEEEEec
Q 044615 464 FDDGHCIGNGGQGSVYKAKL-PTGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKIRHRNIVKFYGFCSHALHSFVVYEY 542 (571)
Q Consensus 464 ~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 542 (571)
|+..+.||+|+||.||++.. .+++.||+|.+....... .......+|+.++++++||||+++++++.+....++||||
T Consensus 1 y~~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~-~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~v~~~ 79 (260)
T PF00069_consen 1 YRLVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEE-EEREENIREIKILRRLRHPNIVQILDVFQDDNYLYIVMEY 79 (260)
T ss_dssp EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHH-HHHHHHHHHHHHHHHHTBTTBCHEEEEEEESSEEEEEEEE
T ss_pred CEEeEEEEeCCCEEEEEEEECCCCeEEEEEEeccccccc-cccchhhhhhhccccccccccccccccccccccccccccc
Confidence 56788999999999999994 567789999998764332 2233456699999999999999999999999999999999
Q ss_pred cCCCChhhhhccCCCccCCCHHHHhhhc
Q 044615 543 LEMGSLAMNLSNDAAAEQFCWTKRMNAI 570 (571)
Q Consensus 543 ~~~G~L~~~l~~~~~~~~l~w~~r~~ia 570 (571)
+++|+|.+++... ..+++..+..++
T Consensus 80 ~~~~~L~~~l~~~---~~~~~~~~~~~~ 104 (260)
T PF00069_consen 80 CPGGSLQDYLQKN---KPLSEEEILKIA 104 (260)
T ss_dssp ETTEBHHHHHHHH---SSBBHHHHHHHH
T ss_pred ccccccccccccc---cccccccccccc
Confidence 9999999999822 245666665553
No 211
>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.
Probab=99.17 E-value=1e-10 Score=117.32 Aligned_cols=88 Identities=25% Similarity=0.330 Sum_probs=71.8
Q ss_pred CeeeccCcceEEEEEc-CCCCEEEEEEccCCCCCchHhHHHHHHHHH-HHhhcCCCCcccEEEEEEeCCeeEEEEeccCC
Q 044615 468 HCIGNGGQGSVYKAKL-PTGEIVDVKKFHSPLPDEMACQQEFLNEVN-ALTKIRHRNIVKFYGFCSHALHSFVVYEYLEM 545 (571)
Q Consensus 468 ~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~Ei~-~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~ 545 (571)
+.||+|+||.||+|+. .+++.||+|++.+...........+.+|+. +++.++||||+++++++.+.+..|+||||+++
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~ 80 (321)
T cd05603 1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQTAEKLYFVLDYVNG 80 (321)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 3699999999999994 578999999997543222233455666664 57889999999999999999999999999999
Q ss_pred CChhhhhccC
Q 044615 546 GSLAMNLSND 555 (571)
Q Consensus 546 G~L~~~l~~~ 555 (571)
|+|.+++...
T Consensus 81 ~~L~~~l~~~ 90 (321)
T cd05603 81 GELFFHLQRE 90 (321)
T ss_pred CCHHHHHHHc
Confidence 9999888643
No 212
>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in
Probab=99.17 E-value=9.3e-11 Score=117.60 Aligned_cols=88 Identities=25% Similarity=0.390 Sum_probs=73.8
Q ss_pred CeeeccCcceEEEEEc----CCCCEEEEEEccCCCC-CchHhHHHHHHHHHHHhhcCCCCcccEEEEEEeCCeeEEEEec
Q 044615 468 HCIGNGGQGSVYKAKL----PTGEIVDVKKFHSPLP-DEMACQQEFLNEVNALTKIRHRNIVKFYGFCSHALHSFVVYEY 542 (571)
Q Consensus 468 ~~lg~G~~g~V~~~~~----~~~~~vavK~~~~~~~-~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 542 (571)
+.||+|+||.||+++. .+++.||||++..... ........+.+|+.++++++||||+++++++.+.+..|+||||
T Consensus 2 ~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~e~ 81 (323)
T cd05584 2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAFQTGGKLYLILEY 81 (323)
T ss_pred ceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEEecCCeEEEEEeC
Confidence 5799999999999973 3678999999875321 1123345678999999999999999999999999999999999
Q ss_pred cCCCChhhhhccC
Q 044615 543 LEMGSLAMNLSND 555 (571)
Q Consensus 543 ~~~G~L~~~l~~~ 555 (571)
+++|+|.+++...
T Consensus 82 ~~~~~L~~~~~~~ 94 (323)
T cd05584 82 LSGGELFMHLERE 94 (323)
T ss_pred CCCchHHHHHHHc
Confidence 9999999999754
No 213
>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells
Probab=99.17 E-value=1.2e-10 Score=113.48 Aligned_cols=99 Identities=24% Similarity=0.297 Sum_probs=77.5
Q ss_pred CeeeccCcceEEEEEcC---CCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhcCCCCcccEEEEEEeCCeeEEEEeccC
Q 044615 468 HCIGNGGQGSVYKAKLP---TGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKIRHRNIVKFYGFCSHALHSFVVYEYLE 544 (571)
Q Consensus 468 ~~lg~G~~g~V~~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~ 544 (571)
+.||+|+||.||+|... ++..+|+|.+..... ......|.+|+.++++++||||+++++++.+....++||||++
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~--~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~ 78 (269)
T cd05087 1 KEIGNGWFGKVILGEVNSGYTPAQVVVKELRVSAS--VQEQMKFLEEAQPYRSLQHSNLLQCLGQCTEVTPYLLVMEFCP 78 (269)
T ss_pred CcccccCCceEEEEEEcCCCCceEEEEEecCCCCC--hHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCCcEEEEECCC
Confidence 35899999999999743 346799999875432 2234578999999999999999999999999999999999999
Q ss_pred CCChhhhhccCCC--ccCCCHHHHhh
Q 044615 545 MGSLAMNLSNDAA--AEQFCWTKRMN 568 (571)
Q Consensus 545 ~G~L~~~l~~~~~--~~~l~w~~r~~ 568 (571)
+|+|.++++.... ....+|....+
T Consensus 79 ~g~L~~~l~~~~~~~~~~~~~~~~~~ 104 (269)
T cd05087 79 LGDLKGYLRSCRKAELMTPDPTTLQR 104 (269)
T ss_pred CCcHHHHHHHhhhcccccccHHHHHH
Confidence 9999999975332 22345554443
No 214
>KOG3207 consensus Beta-tubulin folding cofactor E [Posttranslational modification, protein turnover, chaperones]
Probab=99.17 E-value=4.4e-12 Score=122.93 Aligned_cols=184 Identities=29% Similarity=0.284 Sum_probs=84.3
Q ss_pred cCCCCCCEEecccCcCccccc--ccccCCCCCCEEEcccCcCcccc--cccccCCCCCCeeecccCcCcccCCcc-ccCC
Q 044615 94 GNMKSLSDLQLSENILNGSIP--LALGNLTNLVVLDLSTNKLSGSI--PLSFANLTSLSILYLYENSLCDSIPKE-IGNM 168 (571)
Q Consensus 94 ~~l~~L~~L~L~~n~i~~~~~--~~~~~l~~L~~L~L~~n~i~~~~--~~~~~~l~~L~~L~L~~n~l~~~~~~~-l~~l 168 (571)
+++.+|+.+.|.+..+. ..+ .....+++++.|||+.|-+.... ......||+|+.|+|+.|.+....... -..+
T Consensus 118 sn~kkL~~IsLdn~~V~-~~~~~~~~k~~~~v~~LdLS~NL~~nw~~v~~i~eqLp~Le~LNls~Nrl~~~~~s~~~~~l 196 (505)
T KOG3207|consen 118 SNLKKLREISLDNYRVE-DAGIEEYSKILPNVRDLDLSRNLFHNWFPVLKIAEQLPSLENLNLSSNRLSNFISSNTTLLL 196 (505)
T ss_pred hhHHhhhheeecCcccc-ccchhhhhhhCCcceeecchhhhHHhHHHHHHHHHhcccchhcccccccccCCccccchhhh
Confidence 34555555555555543 122 23344555555555555544321 122345556666666666554211111 1134
Q ss_pred CCCCEEEccCCCCCccCChhhhhccCCCcEEEccCCcccccCCccccCCCCCcEEeCccCcCcCCC-ChhhhCCCCCCEE
Q 044615 169 NSLSILDLSSNKLNGSIPLSLANLTNSLKVLYLSSNHIVGEIPLGHGMLSSLIQLTLNNNELSGQL-SPELGSLIQLEYL 247 (571)
Q Consensus 169 ~~L~~L~L~~n~l~~~~p~~~~~l~~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~-~~~~~~l~~L~~L 247 (571)
+.|+.|.|+.|.++..--..+....++|+.|++..|............+..|+.|+|++|++-... ....+.++.|+.|
T Consensus 197 ~~lK~L~l~~CGls~k~V~~~~~~fPsl~~L~L~~N~~~~~~~~~~~i~~~L~~LdLs~N~li~~~~~~~~~~l~~L~~L 276 (505)
T KOG3207|consen 197 SHLKQLVLNSCGLSWKDVQWILLTFPSLEVLYLEANEIILIKATSTKILQTLQELDLSNNNLIDFDQGYKVGTLPGLNQL 276 (505)
T ss_pred hhhheEEeccCCCCHHHHHHHHHhCCcHHHhhhhcccccceecchhhhhhHHhhccccCCcccccccccccccccchhhh
Confidence 556666666666653222222222223666666666322122222333445566666665554321 1234455666666
Q ss_pred EcccCcccccc-chh-----hccCCCCCEEEcCCccC
Q 044615 248 DLSANTFHKSI-PES-----LSNLVKLHYLNLSNNQF 278 (571)
Q Consensus 248 ~L~~n~l~~~~-~~~-----l~~l~~L~~L~Ls~n~l 278 (571)
+++.+.+...- |+. ...+++|++|+++.|++
T Consensus 277 nls~tgi~si~~~d~~s~~kt~~f~kL~~L~i~~N~I 313 (505)
T KOG3207|consen 277 NLSSTGIASIAEPDVESLDKTHTFPKLEYLNISENNI 313 (505)
T ss_pred hccccCcchhcCCCccchhhhcccccceeeecccCcc
Confidence 66665554321 111 13344555555555554
No 215
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=99.17 E-value=8.9e-11 Score=114.31 Aligned_cols=102 Identities=23% Similarity=0.307 Sum_probs=83.8
Q ss_pred cCCCccCeeeccCcceEEEEE-cCCCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhcCCCCcccEEEEEEeCCeeEEEE
Q 044615 462 NNFDDGHCIGNGGQGSVYKAK-LPTGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKIRHRNIVKFYGFCSHALHSFVVY 540 (571)
Q Consensus 462 ~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~ 540 (571)
++|...+.||+|+||.||+|. ..+++.||+|.++.... .....+.+|+.+++.++||||+++++++...+..|+||
T Consensus 9 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~---~~~~~~~~e~~~~~~l~h~~ii~~~~~~~~~~~~~lv~ 85 (267)
T cd06645 9 EDFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEPG---EDFAVVQQEIIMMKDCKHSNIVAYFGSYLRRDKLWICM 85 (267)
T ss_pred HHHHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCch---hHHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEE
Confidence 357788899999999999998 55789999999875432 22456889999999999999999999999999999999
Q ss_pred eccCCCChhhhhccCCCccCCCHHHHhhh
Q 044615 541 EYLEMGSLAMNLSNDAAAEQFCWTKRMNA 569 (571)
Q Consensus 541 e~~~~G~L~~~l~~~~~~~~l~w~~r~~i 569 (571)
||+++|+|.+++...+ .+++.+...+
T Consensus 86 e~~~~~~L~~~~~~~~---~~~~~~~~~~ 111 (267)
T cd06645 86 EFCGGGSLQDIYHVTG---PLSESQIAYV 111 (267)
T ss_pred eccCCCcHHHHHHhcC---CCCHHHHHHH
Confidence 9999999999987443 3455544443
No 216
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=99.16 E-value=6.9e-11 Score=116.35 Aligned_cols=112 Identities=22% Similarity=0.287 Sum_probs=86.0
Q ss_pred cHHHHHHHccCCCccCeeeccCcceEEEEE-cCCCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhc-CCCCcccEEEEE
Q 044615 453 VHEEIIRATNNFDDGHCIGNGGQGSVYKAK-LPTGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKI-RHRNIVKFYGFC 530 (571)
Q Consensus 453 ~~~~~~~~~~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l-~H~niv~l~~~~ 530 (571)
.++.+..+.++|++.+.||+|+||.||+|. ..+++.+|+|.+..... ..+.+.+|+.++.++ +||||+++++++
T Consensus 9 ~~~~~~~~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~----~~~~~~~e~~~l~~l~~h~~i~~~~~~~ 84 (286)
T cd06638 9 IFDSFPDPSDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIHD----IDEEIEAEYNILKALSDHPNVVKFYGMY 84 (286)
T ss_pred EeecCCCcccceeeeeeeccCCCcEEEEEEECCCCceeEEEeeccccc----hHHHHHHHHHHHHHHhcCCCeeeeeeee
Confidence 345566778899999999999999999998 45788999999864321 135678899999999 799999999988
Q ss_pred E-----eCCeeEEEEeccCCCChhhhhccCC-CccCCCHHHHhh
Q 044615 531 S-----HALHSFVVYEYLEMGSLAMNLSNDA-AAEQFCWTKRMN 568 (571)
Q Consensus 531 ~-----~~~~~~lv~e~~~~G~L~~~l~~~~-~~~~l~w~~r~~ 568 (571)
. .++..++||||+++|+|.++++... ....+++.....
T Consensus 85 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~ 128 (286)
T cd06638 85 YKKDVKNGDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAY 128 (286)
T ss_pred eecccCCCCeEEEEEeecCCCCHHHHHHHhhccCccccHHHHHH
Confidence 4 3456899999999999999886321 123455544433
No 217
>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes. Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an
Probab=99.16 E-value=1.6e-10 Score=112.15 Aligned_cols=102 Identities=21% Similarity=0.324 Sum_probs=83.5
Q ss_pred CCCccCeeeccCcceEEEEEcCCCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhcCCCCcccEEEEEEeCCeeEEEEec
Q 044615 463 NFDDGHCIGNGGQGSVYKAKLPTGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKIRHRNIVKFYGFCSHALHSFVVYEY 542 (571)
Q Consensus 463 ~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 542 (571)
+|.+...||+|+||.||+|....+..+|+|.+..... ..+.|.+|++++++++|||++++++++. .+..++||||
T Consensus 7 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~lK~~~~~~~----~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e~ 81 (260)
T cd05069 7 SLRLDVKLGQGCFGEVWMGTWNGTTKVAIKTLKPGTM----MPEAFLQEAQIMKKLRHDKLVPLYAVVS-EEPIYIVTEF 81 (260)
T ss_pred HeeeeeeecCcCCCeEEEEEEcCCceEEEEEcccCCc----cHHHHHHHHHHHHhCCCCCeeeEEEEEc-CCCcEEEEEc
Confidence 4788899999999999999976667799999865432 2367889999999999999999999885 4568899999
Q ss_pred cCCCChhhhhccCCCccCCCHHHHhhhc
Q 044615 543 LEMGSLAMNLSNDAAAEQFCWTKRMNAI 570 (571)
Q Consensus 543 ~~~G~L~~~l~~~~~~~~l~w~~r~~ia 570 (571)
+++|+|.++++... ...++|..++.++
T Consensus 82 ~~~~~L~~~~~~~~-~~~~~~~~~~~~~ 108 (260)
T cd05069 82 MGKGSLLDFLKEGD-GKYLKLPQLVDMA 108 (260)
T ss_pred CCCCCHHHHHhhCC-CCCCCHHHHHHHH
Confidence 99999999997543 2357888777664
No 218
>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio
Probab=99.16 E-value=1.6e-10 Score=113.72 Aligned_cols=105 Identities=25% Similarity=0.348 Sum_probs=85.4
Q ss_pred cCCCccCeeeccCcceEEEEEc-CCCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhcCCCCcccEEEEEEeCCeeEEEE
Q 044615 462 NNFDDGHCIGNGGQGSVYKAKL-PTGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKIRHRNIVKFYGFCSHALHSFVVY 540 (571)
Q Consensus 462 ~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~ 540 (571)
++|+..+.||+|+||.||+|.. .+++.||+|++....... ...+.+.+|++++++++|||++++++++......++||
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~-~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~ 79 (286)
T cd07847 1 EKYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDP-VIKKIALREIRMLKQLKHPNLVNLIEVFRRKRKLHLVF 79 (286)
T ss_pred CceeeeeeecccCCeEEEEEEECCCCcEEEEEEEeecccCc-cccHHHHHHHHHHHhCCCCCEeeeeeEEeeCCEEEEEE
Confidence 3588889999999999999995 478999999986443221 22456889999999999999999999999999999999
Q ss_pred eccCCCChhhhhccCCCccCCCHHHHhhhc
Q 044615 541 EYLEMGSLAMNLSNDAAAEQFCWTKRMNAI 570 (571)
Q Consensus 541 e~~~~G~L~~~l~~~~~~~~l~w~~r~~ia 570 (571)
||++++.|..++... ..++|..+.+++
T Consensus 80 e~~~~~~l~~~~~~~---~~~~~~~~~~~~ 106 (286)
T cd07847 80 EYCDHTVLNELEKNP---RGVPEHLIKKII 106 (286)
T ss_pred eccCccHHHHHHhCC---CCCCHHHHHHHH
Confidence 999999888876533 247777776654
No 219
>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor
Probab=99.16 E-value=1.6e-10 Score=115.51 Aligned_cols=104 Identities=19% Similarity=0.388 Sum_probs=82.1
Q ss_pred cCCCccCeeeccCcceEEEEEc-CCCC----EEEEEEccCCCCCchHhHHHHHHHHHHHhhcCCCCcccEEEEEEeCCee
Q 044615 462 NNFDDGHCIGNGGQGSVYKAKL-PTGE----IVDVKKFHSPLPDEMACQQEFLNEVNALTKIRHRNIVKFYGFCSHALHS 536 (571)
Q Consensus 462 ~~~~~~~~lg~G~~g~V~~~~~-~~~~----~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~ 536 (571)
.+|+..+.||+|+||.||+|.. .++. .||+|.+.... .....++|.+|+.+++.++||||++++|+|... ..
T Consensus 7 ~~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~g~~~~~-~~ 83 (316)
T cd05108 7 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT--SPKANKEILDEAYVMASVDNPHVCRLLGICLTS-TV 83 (316)
T ss_pred hhceeeeeeecCCCceEEEEEEecCCCccceeEEEEeccccC--CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEcCC-Cc
Confidence 4689999999999999999984 3444 38999986432 233456799999999999999999999999764 56
Q ss_pred EEEEeccCCCChhhhhccCCCccCCCHHHHhhhc
Q 044615 537 FVVYEYLEMGSLAMNLSNDAAAEQFCWTKRMNAI 570 (571)
Q Consensus 537 ~lv~e~~~~G~L~~~l~~~~~~~~l~w~~r~~ia 570 (571)
++|+||+++|+|.++++.... .++|...++++
T Consensus 84 ~~v~e~~~~g~l~~~l~~~~~--~~~~~~~~~~~ 115 (316)
T cd05108 84 QLITQLMPFGCLLDYVREHKD--NIGSQYLLNWC 115 (316)
T ss_pred eeeeecCCCCCHHHHHHhccc--cCCHHHHHHHH
Confidence 799999999999999985432 46666655543
No 220
>KOG1909 consensus Ran GTPase-activating protein [RNA processing and modification; Nuclear structure; Signal transduction mechanisms]
Probab=99.16 E-value=6.1e-12 Score=118.75 Aligned_cols=247 Identities=25% Similarity=0.286 Sum_probs=160.2
Q ss_pred cccCCCCCCEEEcccCcCccc----ccccccCCCCCCeeecccCcCc---ccCCc-------cccCCCCCCEEEccCCCC
Q 044615 116 ALGNLTNLVVLDLSTNKLSGS----IPLSFANLTSLSILYLYENSLC---DSIPK-------EIGNMNSLSILDLSSNKL 181 (571)
Q Consensus 116 ~~~~l~~L~~L~L~~n~i~~~----~~~~~~~l~~L~~L~L~~n~l~---~~~~~-------~l~~l~~L~~L~L~~n~l 181 (571)
....+..++.|+|++|.+... +...+.+.++|+..++++--.. ..+|+ .+...++|++|+||+|.+
T Consensus 25 ~~~~~~s~~~l~lsgnt~G~EAa~~i~~~L~~~~~L~~v~~sd~ftGR~~~Ei~e~L~~l~~aL~~~~~L~~ldLSDNA~ 104 (382)
T KOG1909|consen 25 ELEPMDSLTKLDLSGNTFGTEAARAIAKVLASKKELREVNLSDMFTGRLKDEIPEALKMLSKALLGCPKLQKLDLSDNAF 104 (382)
T ss_pred HhcccCceEEEeccCCchhHHHHHHHHHHHhhcccceeeehHhhhcCCcHHHHHHHHHHHHHHHhcCCceeEeecccccc
Confidence 445567889999999988643 3445667778888887653221 12332 344567888888888887
Q ss_pred CccCChhhhhccC---CCcEEEccCCcccccCCccccCCCCCcEEeCccCcCcCCCChhhhCCCCCCEEEcccCccccc-
Q 044615 182 NGSIPLSLANLTN---SLKVLYLSSNHIVGEIPLGHGMLSSLIQLTLNNNELSGQLSPELGSLIQLEYLDLSANTFHKS- 257 (571)
Q Consensus 182 ~~~~p~~~~~l~~---~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~- 257 (571)
.-..+..+..+.+ +|++|+|.+|.+...-...++ ..|..|. .+ .-...-++|+.+..+.|++...
T Consensus 105 G~~g~~~l~~ll~s~~~L~eL~L~N~Glg~~ag~~l~--~al~~l~--~~-------kk~~~~~~Lrv~i~~rNrlen~g 173 (382)
T KOG1909|consen 105 GPKGIRGLEELLSSCTDLEELYLNNCGLGPEAGGRLG--RALFELA--VN-------KKAASKPKLRVFICGRNRLENGG 173 (382)
T ss_pred CccchHHHHHHHHhccCHHHHhhhcCCCChhHHHHHH--HHHHHHH--HH-------hccCCCcceEEEEeecccccccc
Confidence 6444444433221 255555555554311111111 0122221 11 1123457899999999998643
Q ss_pred ---cchhhccCCCCCEEEcCCccCccC----cchhhhcccCCCEEEccCCcCCcc----cchhccCCCCCCEEEccCCcC
Q 044615 258 ---IPESLSNLVKLHYLNLSNNQFSQK----IPNKIEKLIHLSELDLSHNIFREE----IPSQICSMQSLEKLNLSHNNL 326 (571)
Q Consensus 258 ---~~~~l~~l~~L~~L~Ls~n~l~~~----~~~~~~~l~~L~~L~Ls~n~l~~~----~~~~~~~l~~L~~L~Ls~n~l 326 (571)
+...|...+.|+.+.++.|.|... +...+..+++|+.|||.+|-++.. +...++.++.|++|++++|.+
T Consensus 174 a~~~A~~~~~~~~leevr~~qN~I~~eG~~al~eal~~~~~LevLdl~DNtft~egs~~LakaL~s~~~L~El~l~dcll 253 (382)
T KOG1909|consen 174 ATALAEAFQSHPTLEEVRLSQNGIRPEGVTALAEALEHCPHLEVLDLRDNTFTLEGSVALAKALSSWPHLRELNLGDCLL 253 (382)
T ss_pred HHHHHHHHHhccccceEEEecccccCchhHHHHHHHHhCCcceeeecccchhhhHHHHHHHHHhcccchheeeccccccc
Confidence 234577789999999999998532 234577899999999999988753 345678899999999999999
Q ss_pred cccccccc----c-cCCCCCEEECcCCcCcccCC-----CCCccCCCCcccccCCcC
Q 044615 327 SGSIPRCF----E-EMHWLSCIDISYNALQGLIP-----NSTAFRDAPMLALQGNKR 373 (571)
Q Consensus 327 ~~~~p~~~----~-~l~~L~~L~ls~N~l~~~~~-----~~~~~~~~~~l~l~~n~~ 373 (571)
...-...| . ..+.|+.|.+.+|.++.--. .....+.+..|.+++|+.
T Consensus 254 ~~~Ga~a~~~al~~~~p~L~vl~l~gNeIt~da~~~la~~~~ek~dL~kLnLngN~l 310 (382)
T KOG1909|consen 254 ENEGAIAFVDALKESAPSLEVLELAGNEITRDAALALAACMAEKPDLEKLNLNGNRL 310 (382)
T ss_pred ccccHHHHHHHHhccCCCCceeccCcchhHHHHHHHHHHHHhcchhhHHhcCCcccc
Confidence 75443333 2 35899999999999864211 112256778889999975
No 221
>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase. Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea
Probab=99.16 E-value=2e-10 Score=113.05 Aligned_cols=104 Identities=26% Similarity=0.339 Sum_probs=86.6
Q ss_pred CCCccCeeeccCcceEEEEE-cCCCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhcCCCCcccEEEEEEeCCeeEEEEe
Q 044615 463 NFDDGHCIGNGGQGSVYKAK-LPTGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKIRHRNIVKFYGFCSHALHSFVVYE 541 (571)
Q Consensus 463 ~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~e 541 (571)
+|++.+.||+|+||.||+|. ..+|+.||+|++....... ...+.+.+|+.++++++||||+++++++......|+|||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~-~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e 79 (286)
T cd07832 1 RYKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLEG-GIPNQALREIKALQACQHPYVVKLLDVFPHGSGFVLVME 79 (286)
T ss_pred CceEEeecccCCCcEEEEEEECCCCceEEEEEEEcccccc-hhhHHHHHHHHHHHhCCCCCCcceeeEEecCCeeEEEec
Confidence 47888999999999999999 4578999999997654222 335679999999999999999999999999999999999
Q ss_pred ccCCCChhhhhccCCCccCCCHHHHhhhc
Q 044615 542 YLEMGSLAMNLSNDAAAEQFCWTKRMNAI 570 (571)
Q Consensus 542 ~~~~G~L~~~l~~~~~~~~l~w~~r~~ia 570 (571)
|+ +++|.+++.... ..+++.++..++
T Consensus 80 ~~-~~~L~~~~~~~~--~~~~~~~~~~~~ 105 (286)
T cd07832 80 YM-PSDLSEVLRDEE--RPLPEAQVKSYM 105 (286)
T ss_pred cc-CCCHHHHHHhcC--CCCCHHHHHHHH
Confidence 99 999999987543 357777666553
No 222
>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.15 E-value=4.6e-11 Score=122.33 Aligned_cols=94 Identities=22% Similarity=0.294 Sum_probs=81.1
Q ss_pred HccCCCccCeeeccCcceEEEEEc-CCCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhc-CCCCcccEEEEEEeCCeeE
Q 044615 460 ATNNFDDGHCIGNGGQGSVYKAKL-PTGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKI-RHRNIVKFYGFCSHALHSF 537 (571)
Q Consensus 460 ~~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l-~H~niv~l~~~~~~~~~~~ 537 (571)
..++|...+++|+|.||+|+.+.. .+++.+|||++++...-...+.+..+.|-+|+... +||.+++++..|++.+.+|
T Consensus 366 ~l~~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT~~~l~ 445 (694)
T KOG0694|consen 366 TLDDFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCFQTKEHLF 445 (694)
T ss_pred cccceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeecccccccCCeEE
Confidence 446799999999999999999994 47889999999987665555678888999888766 5999999999999999999
Q ss_pred EEEeccCCCChhhhhc
Q 044615 538 VVYEYLEMGSLAMNLS 553 (571)
Q Consensus 538 lv~e~~~~G~L~~~l~ 553 (571)
.||||+.|||+..+.+
T Consensus 446 fvmey~~Ggdm~~~~~ 461 (694)
T KOG0694|consen 446 FVMEYVAGGDLMHHIH 461 (694)
T ss_pred EEEEecCCCcEEEEEe
Confidence 9999999999655444
No 223
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=99.15 E-value=1.3e-10 Score=114.12 Aligned_cols=102 Identities=19% Similarity=0.248 Sum_probs=85.2
Q ss_pred CCccCeeeccCcceEEEEEc-CCCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhcCCCCcccEEEEEEeCCeeEEEEec
Q 044615 464 FDDGHCIGNGGQGSVYKAKL-PTGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKIRHRNIVKFYGFCSHALHSFVVYEY 542 (571)
Q Consensus 464 ~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 542 (571)
|++.+.||+|+||.||+|.. .++..+|+|.+.... ....+.+.+|+++++.++|||++++++++...+..|+||||
T Consensus 7 ~~i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~---~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~~v~e~ 83 (282)
T cd06643 7 WEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTKS---EEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEF 83 (282)
T ss_pred HHHHhhcccCCCeEEEEEEECCCCeEEEEEEeCCCC---HHHHHHHHHHHHHHHHCCCCCeeeEEEEEeeCCEEEEEEEe
Confidence 56778899999999999994 468889999986432 23456789999999999999999999999999999999999
Q ss_pred cCCCChhhhhccCCCccCCCHHHHhhhc
Q 044615 543 LEMGSLAMNLSNDAAAEQFCWTKRMNAI 570 (571)
Q Consensus 543 ~~~G~L~~~l~~~~~~~~l~w~~r~~ia 570 (571)
+++|+|.+++.+.. ..++|..+..++
T Consensus 84 ~~~~~l~~~~~~~~--~~l~~~~~~~~~ 109 (282)
T cd06643 84 CAGGAVDAVMLELE--RPLTEPQIRVVC 109 (282)
T ss_pred cCCCcHHHHHHhcC--CCCCHHHHHHHH
Confidence 99999999886432 257887776654
No 224
>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate
Probab=99.15 E-value=3e-10 Score=110.53 Aligned_cols=103 Identities=31% Similarity=0.417 Sum_probs=83.6
Q ss_pred CCccCeeeccCcceEEEEE-cCCCCEEEEEEccCCCCCch------HhHHHHHHHHHHHhhcCCCCcccEEEEEEeCCee
Q 044615 464 FDDGHCIGNGGQGSVYKAK-LPTGEIVDVKKFHSPLPDEM------ACQQEFLNEVNALTKIRHRNIVKFYGFCSHALHS 536 (571)
Q Consensus 464 ~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~------~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~ 536 (571)
|.....||+|+||.||+|. ..+++.+|+|.+........ ...+.+.+|+.++++++||||+++++++.+.+..
T Consensus 2 ~~~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~ 81 (267)
T cd06628 2 WIKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSSLDADHL 81 (267)
T ss_pred ccccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCcc
Confidence 6778899999999999998 45788999998865433221 2235688999999999999999999999999999
Q ss_pred EEEEeccCCCChhhhhccCCCccCCCHHHHhhh
Q 044615 537 FVVYEYLEMGSLAMNLSNDAAAEQFCWTKRMNA 569 (571)
Q Consensus 537 ~lv~e~~~~G~L~~~l~~~~~~~~l~w~~r~~i 569 (571)
++||||+++++|.+++...+ .+++.....+
T Consensus 82 ~lv~e~~~~~~L~~~l~~~~---~l~~~~~~~~ 111 (267)
T cd06628 82 NIFLEYVPGGSVAALLNNYG---AFEETLVRNF 111 (267)
T ss_pred EEEEEecCCCCHHHHHHhcc---CccHHHHHHH
Confidence 99999999999999997542 3556555444
No 225
>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit
Probab=99.15 E-value=1.7e-10 Score=114.22 Aligned_cols=107 Identities=19% Similarity=0.343 Sum_probs=85.1
Q ss_pred cCCCccCeeeccCcceEEEEEcC-----------------CCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhcCCCCcc
Q 044615 462 NNFDDGHCIGNGGQGSVYKAKLP-----------------TGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKIRHRNIV 524 (571)
Q Consensus 462 ~~~~~~~~lg~G~~g~V~~~~~~-----------------~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~H~niv 524 (571)
++|++.+.||+|+||.||++... ++..||+|.+.... .....++|.+|++++++++||||+
T Consensus 5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~--~~~~~~~~~~E~~~l~~l~~~~i~ 82 (296)
T cd05095 5 KRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDA--NKNARNDFLKEIKIMSRLKDPNII 82 (296)
T ss_pred hhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccC--CHHHHHHHHHHHHHHHhCCCCCcc
Confidence 46889999999999999998522 23468999987542 223356899999999999999999
Q ss_pred cEEEEEEeCCeeEEEEeccCCCChhhhhccCCC--------ccCCCHHHHhhhc
Q 044615 525 KFYGFCSHALHSFVVYEYLEMGSLAMNLSNDAA--------AEQFCWTKRMNAI 570 (571)
Q Consensus 525 ~l~~~~~~~~~~~lv~e~~~~G~L~~~l~~~~~--------~~~l~w~~r~~ia 570 (571)
++++++...+..++||||+++|+|.+++..... ...++|.+..+++
T Consensus 83 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 136 (296)
T cd05095 83 RLLAVCITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMA 136 (296)
T ss_pred eEEEEEecCCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHH
Confidence 999999999999999999999999999975321 1246677666554
No 226
>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I
Probab=99.15 E-value=1.4e-10 Score=115.95 Aligned_cols=98 Identities=21% Similarity=0.272 Sum_probs=76.4
Q ss_pred CeeeccCcceEEEEEc-CCCCEEEEEEccCCCCCchHhHHHHHHHHHHHhh-cCCCCcccEEEEEEeCCeeEEEEeccCC
Q 044615 468 HCIGNGGQGSVYKAKL-PTGEIVDVKKFHSPLPDEMACQQEFLNEVNALTK-IRHRNIVKFYGFCSHALHSFVVYEYLEM 545 (571)
Q Consensus 468 ~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~-l~H~niv~l~~~~~~~~~~~lv~e~~~~ 545 (571)
+.||+|+||.||+|+. .+|+.||+|.+++.........+.+..|++++.. .+||||+++++++.+.+..|+||||+++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~~ 80 (316)
T cd05620 1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQTKEHLFFVMEFLNG 80 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEeCCEEEEEECCCCC
Confidence 4699999999999994 5789999999975432112234556778888775 4999999999999999999999999999
Q ss_pred CChhhhhccCCCccCCCHHHHhh
Q 044615 546 GSLAMNLSNDAAAEQFCWTKRMN 568 (571)
Q Consensus 546 G~L~~~l~~~~~~~~l~w~~r~~ 568 (571)
|+|.+++.... .+++.+...
T Consensus 81 g~L~~~i~~~~---~~~~~~~~~ 100 (316)
T cd05620 81 GDLMFHIQDKG---RFDLYRATF 100 (316)
T ss_pred CcHHHHHHHcC---CCCHHHHHH
Confidence 99999987542 345544433
No 227
>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)
Probab=99.15 E-value=2e-10 Score=112.30 Aligned_cols=101 Identities=26% Similarity=0.300 Sum_probs=85.0
Q ss_pred CCCccCeeeccCcceEEEEE-cCCCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhcCCCCcccEEEEEEeCCeeEEEEe
Q 044615 463 NFDDGHCIGNGGQGSVYKAK-LPTGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKIRHRNIVKFYGFCSHALHSFVVYE 541 (571)
Q Consensus 463 ~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~e 541 (571)
+|+..+.||.|+||.||+|. ..+++.||+|.+..... ......+.+|+++++.++||||+++++++.+....|+|+|
T Consensus 2 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e 79 (274)
T cd06609 2 LFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEA--EDEIEDIQQEIQFLSQCRSPYITKYYGSFLKGSKLWIIME 79 (274)
T ss_pred hhhhhhhhcCCCCeEEEEEEECCCCeEEEEEEeecccc--chHHHHHHHHHHHHHHcCCCCeeeeeEEEEECCeEEEEEE
Confidence 57888999999999999999 45789999999875432 2334678899999999999999999999999999999999
Q ss_pred ccCCCChhhhhccCCCccCCCHHHHhhh
Q 044615 542 YLEMGSLAMNLSNDAAAEQFCWTKRMNA 569 (571)
Q Consensus 542 ~~~~G~L~~~l~~~~~~~~l~w~~r~~i 569 (571)
|+++|+|.+++... .++|.....+
T Consensus 80 ~~~~~~L~~~~~~~----~~~~~~~~~~ 103 (274)
T cd06609 80 YCGGGSCLDLLKPG----KLDETYIAFI 103 (274)
T ss_pred eeCCCcHHHHHhhc----CCCHHHHHHH
Confidence 99999999999753 4666665554
No 228
>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological
Probab=99.15 E-value=1.6e-10 Score=113.04 Aligned_cols=107 Identities=21% Similarity=0.297 Sum_probs=86.5
Q ss_pred cCCCccCeeeccCcceEEEEEcC------CCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhcCCCCcccEEEEEEeCCe
Q 044615 462 NNFDDGHCIGNGGQGSVYKAKLP------TGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKIRHRNIVKFYGFCSHALH 535 (571)
Q Consensus 462 ~~~~~~~~lg~G~~g~V~~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~ 535 (571)
++|.+.+.||+|+||.||+|... .+..||+|.+.... .......+.+|+.+++.++||||+++++++.....
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~--~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~ 83 (277)
T cd05032 6 EKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENA--SMRERIEFLNEASVMKEFNCHHVVRLLGVVSTGQP 83 (277)
T ss_pred HHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCcc--CHHHHHHHHHHHHHHHhCCCCceeEEEEEEcCCCC
Confidence 46888899999999999999843 24689999986442 22335678999999999999999999999999999
Q ss_pred eEEEEeccCCCChhhhhccCCC-------ccCCCHHHHhhhc
Q 044615 536 SFVVYEYLEMGSLAMNLSNDAA-------AEQFCWTKRMNAI 570 (571)
Q Consensus 536 ~~lv~e~~~~G~L~~~l~~~~~-------~~~l~w~~r~~ia 570 (571)
.|+||||+++|+|.+++..... ...++|...++|+
T Consensus 84 ~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 125 (277)
T cd05032 84 TLVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMA 125 (277)
T ss_pred cEEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHH
Confidence 9999999999999999975322 1246787777654
No 229
>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]
Probab=99.15 E-value=3.9e-12 Score=136.30 Aligned_cols=108 Identities=19% Similarity=0.154 Sum_probs=90.4
Q ss_pred HHHHccCCCccCeeeccCcceEEEEEc-CCCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhcCCCCcccEEEEEEeCCe
Q 044615 457 IIRATNNFDDGHCIGNGGQGSVYKAKL-PTGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKIRHRNIVKFYGFCSHALH 535 (571)
Q Consensus 457 ~~~~~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~ 535 (571)
+.-..++|++.++||+|+||.|..++. .+++.||+|++.+..+-......-|..|-.+|..-+.+.||+++.+|.+..+
T Consensus 70 lrl~~~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~Wiv~LhyAFQD~~~ 149 (1317)
T KOG0612|consen 70 LRLKAEDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGNSEWIVQLHYAFQDERY 149 (1317)
T ss_pred HhCCHHhhHHHHHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcHHHHHHHHHhcCccc
Confidence 333457899999999999999999994 5799999999987433322334568889999999999999999999999999
Q ss_pred eEEEEeccCCCChhhhhccCCCccCCCHHH
Q 044615 536 SFVVYEYLEMGSLAMNLSNDAAAEQFCWTK 565 (571)
Q Consensus 536 ~~lv~e~~~~G~L~~~l~~~~~~~~l~w~~ 565 (571)
+|+|||||+||||-.++.+.+ ..+-+|++
T Consensus 150 LYlVMdY~pGGDlltLlSk~~-~~pE~~Ar 178 (1317)
T KOG0612|consen 150 LYLVMDYMPGGDLLTLLSKFD-RLPEDWAR 178 (1317)
T ss_pred eEEEEecccCchHHHHHhhcC-CChHHHHH
Confidence 999999999999999998665 45667764
No 230
>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of
Probab=99.15 E-value=2.9e-10 Score=110.34 Aligned_cols=102 Identities=27% Similarity=0.395 Sum_probs=85.9
Q ss_pred CCCccCeeeccCcceEEEEEc-CCCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhcCCCCcccEEEEEEeCCeeEEEEe
Q 044615 463 NFDDGHCIGNGGQGSVYKAKL-PTGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKIRHRNIVKFYGFCSHALHSFVVYE 541 (571)
Q Consensus 463 ~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~e 541 (571)
+|+..+.||+|+||.||+|.. .+++.||||++...... ...+.+.+|++.+.+++|||++++++++...+..++|||
T Consensus 2 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~--~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e 79 (264)
T cd06623 2 DLERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDE--EFRKQLLRELKTLRSCESPYVVKCYGAFYKEGEISIVLE 79 (264)
T ss_pred cceeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcch--HHHHHHHHHHHHHHhcCCCCeeeEEEEEccCCeEEEEEE
Confidence 688889999999999999995 46999999998765332 345779999999999999999999999999999999999
Q ss_pred ccCCCChhhhhccCCCccCCCHHHHhhh
Q 044615 542 YLEMGSLAMNLSNDAAAEQFCWTKRMNA 569 (571)
Q Consensus 542 ~~~~G~L~~~l~~~~~~~~l~w~~r~~i 569 (571)
|+++++|.+++... ..+++.....+
T Consensus 80 ~~~~~~L~~~l~~~---~~l~~~~~~~~ 104 (264)
T cd06623 80 YMDGGSLADLLKKV---GKIPEPVLAYI 104 (264)
T ss_pred ecCCCcHHHHHHHc---CCCCHHHHHHH
Confidence 99999999999754 24555555544
No 231
>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer
Probab=99.15 E-value=2.1e-10 Score=112.70 Aligned_cols=92 Identities=29% Similarity=0.487 Sum_probs=77.7
Q ss_pred cCCCccCeeeccCcceEEEEEcC-CC-----CEEEEEEccCCCCCchHhHHHHHHHHHHHhhcCCCCcccEEEEEEeCCe
Q 044615 462 NNFDDGHCIGNGGQGSVYKAKLP-TG-----EIVDVKKFHSPLPDEMACQQEFLNEVNALTKIRHRNIVKFYGFCSHALH 535 (571)
Q Consensus 462 ~~~~~~~~lg~G~~g~V~~~~~~-~~-----~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~ 535 (571)
++|+..+.||+|+||.||+|... .+ ..||+|.+.... .....+.|.+|++++++++||||+++++++.....
T Consensus 5 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~--~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~ 82 (283)
T cd05048 5 SAVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENA--EPKVQQEFRQEAELMSDLQHPNIVCLLGVCTKEQP 82 (283)
T ss_pred HHcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCC--CHHHHHHHHHHHHHHHhcCCcccceEEEEEcCCCc
Confidence 35888899999999999999843 22 579999987443 22345679999999999999999999999999899
Q ss_pred eEEEEeccCCCChhhhhccC
Q 044615 536 SFVVYEYLEMGSLAMNLSND 555 (571)
Q Consensus 536 ~~lv~e~~~~G~L~~~l~~~ 555 (571)
.|++|||+++|+|.+++...
T Consensus 83 ~~~~~e~~~~~~L~~~l~~~ 102 (283)
T cd05048 83 TCMLFEYLAHGDLHEFLVRN 102 (283)
T ss_pred eEEEEecCCCCcHHHHHHhc
Confidence 99999999999999999753
No 232
>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly
Probab=99.15 E-value=1.5e-10 Score=114.17 Aligned_cols=106 Identities=25% Similarity=0.452 Sum_probs=86.0
Q ss_pred cCCCccCeeeccCcceEEEEEc------CCCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhcCCCCcccEEEEEEeCCe
Q 044615 462 NNFDDGHCIGNGGQGSVYKAKL------PTGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKIRHRNIVKFYGFCSHALH 535 (571)
Q Consensus 462 ~~~~~~~~lg~G~~g~V~~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~ 535 (571)
.+|.+.+.+|+|+||.||++.. .++..+|+|.+.... ....+.+.+|++++++++||||+++++++...+.
T Consensus 5 ~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 81 (288)
T cd05093 5 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDAS---DNARKDFHREAELLTNLQHEHIVKFYGVCVEGDP 81 (288)
T ss_pred HHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcC---HHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCc
Confidence 4688889999999999999973 134568999886432 2335679999999999999999999999999999
Q ss_pred eEEEEeccCCCChhhhhccCCC----------ccCCCHHHHhhhc
Q 044615 536 SFVVYEYLEMGSLAMNLSNDAA----------AEQFCWTKRMNAI 570 (571)
Q Consensus 536 ~~lv~e~~~~G~L~~~l~~~~~----------~~~l~w~~r~~ia 570 (571)
.++||||+++|+|.+++...+. ...++|.+.++++
T Consensus 82 ~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 126 (288)
T cd05093 82 LIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIA 126 (288)
T ss_pred cEEEEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHH
Confidence 9999999999999999975321 2347888777664
No 233
>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea
Probab=99.15 E-value=2.7e-10 Score=111.74 Aligned_cols=104 Identities=20% Similarity=0.371 Sum_probs=83.8
Q ss_pred cCCCccCeeeccCcceEEEEEcC-CCC----EEEEEEccCCCCCchHhHHHHHHHHHHHhhcCCCCcccEEEEEEeCCee
Q 044615 462 NNFDDGHCIGNGGQGSVYKAKLP-TGE----IVDVKKFHSPLPDEMACQQEFLNEVNALTKIRHRNIVKFYGFCSHALHS 536 (571)
Q Consensus 462 ~~~~~~~~lg~G~~g~V~~~~~~-~~~----~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~ 536 (571)
.+|+..+.||+|+||.||+|..+ +|. .+|+|.+..... .....++.+|+.++++++||||+++++++.+ ...
T Consensus 7 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~ 83 (279)
T cd05057 7 TELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETS--PKANKEILDEAYVMASVDHPHVVRLLGICLS-SQV 83 (279)
T ss_pred HHcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCC--HHHHHHHHHHHHHHHhCCCCCcceEEEEEec-Cce
Confidence 45788899999999999999843 343 589998875432 2345679999999999999999999999987 788
Q ss_pred EEEEeccCCCChhhhhccCCCccCCCHHHHhhhc
Q 044615 537 FVVYEYLEMGSLAMNLSNDAAAEQFCWTKRMNAI 570 (571)
Q Consensus 537 ~lv~e~~~~G~L~~~l~~~~~~~~l~w~~r~~ia 570 (571)
++||||+++|+|.+++.+... .++|...++++
T Consensus 84 ~~v~e~~~~g~L~~~l~~~~~--~~~~~~~~~~~ 115 (279)
T cd05057 84 QLITQLMPLGCLLDYVRNHKD--NIGSQYLLNWC 115 (279)
T ss_pred EEEEecCCCCcHHHHHHhccC--CCCHHHHHHHH
Confidence 999999999999999975433 36777666554
No 234
>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase. Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and
Probab=99.15 E-value=1.8e-10 Score=111.41 Aligned_cols=99 Identities=25% Similarity=0.390 Sum_probs=81.1
Q ss_pred CeeeccCcceEEEEEcC--CCC--EEEEEEccCCCCCchHhHHHHHHHHHHHhhcCCCCcccEEEEEEeCCeeEEEEecc
Q 044615 468 HCIGNGGQGSVYKAKLP--TGE--IVDVKKFHSPLPDEMACQQEFLNEVNALTKIRHRNIVKFYGFCSHALHSFVVYEYL 543 (571)
Q Consensus 468 ~~lg~G~~g~V~~~~~~--~~~--~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~ 543 (571)
+.||+|+||.||+|... .++ .||+|.+...... ...+.|.+|++++++++||||+++++++.+ ...++||||+
T Consensus 1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~v~e~~ 77 (257)
T cd05040 1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLS--DIMDDFLKEAAIMHSLDHENLIRLYGVVLT-HPLMMVTELA 77 (257)
T ss_pred CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccH--HHHHHHHHHHHHHhhcCCCCccceeEEEcC-CeEEEEEEec
Confidence 36899999999999843 333 6899999765432 446789999999999999999999999988 8899999999
Q ss_pred CCCChhhhhccCCCccCCCHHHHhhhc
Q 044615 544 EMGSLAMNLSNDAAAEQFCWTKRMNAI 570 (571)
Q Consensus 544 ~~G~L~~~l~~~~~~~~l~w~~r~~ia 570 (571)
++|+|.+++.+... ..++|.....++
T Consensus 78 ~~~~L~~~l~~~~~-~~~~~~~~~~~~ 103 (257)
T cd05040 78 PLGSLLDRLRKDAL-GHFLISTLCDYA 103 (257)
T ss_pred CCCcHHHHHHhccc-ccCcHHHHHHHH
Confidence 99999999986543 457888776554
No 235
>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,
Probab=99.15 E-value=1.5e-10 Score=114.41 Aligned_cols=108 Identities=23% Similarity=0.364 Sum_probs=87.1
Q ss_pred ccCCCccCeeeccCcceEEEEEcC------CCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhc-CCCCcccEEEEEEeC
Q 044615 461 TNNFDDGHCIGNGGQGSVYKAKLP------TGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKI-RHRNIVKFYGFCSHA 533 (571)
Q Consensus 461 ~~~~~~~~~lg~G~~g~V~~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l-~H~niv~l~~~~~~~ 533 (571)
.++|+..+.||+|+||.||++... ....+|+|.+..... .....++.+|++++.++ +||||+++++++...
T Consensus 11 ~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~--~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~ 88 (293)
T cd05053 11 RDRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDAT--EKDLSDLVSEMEMMKMIGKHKNIINLLGVCTQE 88 (293)
T ss_pred HhHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCCC--HHHHHHHHHHHHHHHhhcCCCCeeeEEEEEcCC
Confidence 346888899999999999999842 236799999875432 23356789999999999 899999999999999
Q ss_pred CeeEEEEeccCCCChhhhhccCC-------------CccCCCHHHHhhhc
Q 044615 534 LHSFVVYEYLEMGSLAMNLSNDA-------------AAEQFCWTKRMNAI 570 (571)
Q Consensus 534 ~~~~lv~e~~~~G~L~~~l~~~~-------------~~~~l~w~~r~~ia 570 (571)
+..+++|||+++|+|.++++... ....++|...++|+
T Consensus 89 ~~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~ 138 (293)
T cd05053 89 GPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFA 138 (293)
T ss_pred CCeEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHH
Confidence 99999999999999999997431 23457888777664
No 236
>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=99.14 E-value=1.8e-11 Score=104.55 Aligned_cols=90 Identities=27% Similarity=0.423 Sum_probs=76.3
Q ss_pred CCCccCeeeccCcceEEEEE-cCCCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhcCCCCcccEEEEEEeCCeeEEEEe
Q 044615 463 NFDDGHCIGNGGQGSVYKAK-LPTGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKIRHRNIVKFYGFCSHALHSFVVYE 541 (571)
Q Consensus 463 ~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~e 541 (571)
+|...++||+|.||+||+|+ ..+++.||+|.++.+..+ .+......+||-+++.++|.|||++++...+...+-+|+|
T Consensus 3 ~ydkmekigegtygtvfkarn~~t~eivalkrvrldddd-egvpssalreicllkelkhknivrl~dvlhsdkkltlvfe 81 (292)
T KOG0662|consen 3 KYDKMEKIGEGTYGTVFKARNRETHEIVALKRVRLDDDD-EGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFE 81 (292)
T ss_pred chHHHHhhcCCcceeeEecccCCccceEEEEEEeccCCC-CCCcHHHHHHHHHHHHhhhcceeehhhhhccCceeEEeHH
Confidence 46667889999999999999 668999999999765433 2344567899999999999999999999999999999999
Q ss_pred ccCCCChhhhhcc
Q 044615 542 YLEMGSLAMNLSN 554 (571)
Q Consensus 542 ~~~~G~L~~~l~~ 554 (571)
||.. +|.++...
T Consensus 82 ~cdq-dlkkyfds 93 (292)
T KOG0662|consen 82 FCDQ-DLKKYFDS 93 (292)
T ss_pred HhhH-HHHHHHHh
Confidence 9986 77777653
No 237
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=99.14 E-value=2e-10 Score=112.54 Aligned_cols=90 Identities=23% Similarity=0.324 Sum_probs=78.5
Q ss_pred CCCccCeeeccCcceEEEEEc-CCCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhcCCCCcccEEEEEEeCCeeEEEEe
Q 044615 463 NFDDGHCIGNGGQGSVYKAKL-PTGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKIRHRNIVKFYGFCSHALHSFVVYE 541 (571)
Q Consensus 463 ~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~e 541 (571)
.|+..+.||+|+||.||+|.. .++..||+|.+..... ....+.+.+|++++++++||||+++++++.+....|+|||
T Consensus 5 ~y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 82 (277)
T cd06640 5 LFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEA--EDEIEDIQQEITVLSQCDSPYVTKYYGSYLKGTKLWIIME 82 (277)
T ss_pred hhhhhhhcccCCCeEEEEEEEccCCEEEEEEEEecccc--HHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEEe
Confidence 477788899999999999984 5788999999875422 2335779999999999999999999999999999999999
Q ss_pred ccCCCChhhhhcc
Q 044615 542 YLEMGSLAMNLSN 554 (571)
Q Consensus 542 ~~~~G~L~~~l~~ 554 (571)
|+++|+|.+++..
T Consensus 83 ~~~~~~L~~~i~~ 95 (277)
T cd06640 83 YLGGGSALDLLRA 95 (277)
T ss_pred cCCCCcHHHHHhc
Confidence 9999999999874
No 238
>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4
Probab=99.14 E-value=3.1e-10 Score=110.19 Aligned_cols=103 Identities=29% Similarity=0.421 Sum_probs=86.2
Q ss_pred CCCccCeeeccCcceEEEEE-cCCCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhcCCCCcccEEEEEEeCCeeEEEEe
Q 044615 463 NFDDGHCIGNGGQGSVYKAK-LPTGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKIRHRNIVKFYGFCSHALHSFVVYE 541 (571)
Q Consensus 463 ~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~e 541 (571)
.|+..+.||+|+||.||+|. ..+++.||+|.+...... ....+.+.+|+.++++++||||+++++++...+..++|+|
T Consensus 1 ~y~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~lv~e 79 (264)
T cd06626 1 RWQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDND-PKTIKEIADEMKVLELLKHPNLVKYYGVEVHREKVYIFME 79 (264)
T ss_pred CceeeeEeecCCCcEEEEEEECCCCcEEEEEEEECcccc-hHHHHHHHHHHHHHHhCCCCChhheeeeEecCCEEEEEEe
Confidence 37788999999999999998 457899999999765433 3456789999999999999999999999999999999999
Q ss_pred ccCCCChhhhhccCCCccCCCHHHHhhh
Q 044615 542 YLEMGSLAMNLSNDAAAEQFCWTKRMNA 569 (571)
Q Consensus 542 ~~~~G~L~~~l~~~~~~~~l~w~~r~~i 569 (571)
|+++++|.+++.... .+++..+..|
T Consensus 80 ~~~~~~L~~~~~~~~---~~~~~~~~~i 104 (264)
T cd06626 80 YCSGGTLEELLEHGR---ILDEHVIRVY 104 (264)
T ss_pred cCCCCcHHHHHhhcC---CCChHHHHHH
Confidence 999999999997542 3555555544
No 239
>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=99.14 E-value=1.6e-10 Score=116.36 Aligned_cols=103 Identities=17% Similarity=0.243 Sum_probs=82.0
Q ss_pred CCCccCeeeccCcceEEEEEc----CCCCEEEEEEccCCCC-CchHhHHHHHHHHHHHhhc-CCCCcccEEEEEEeCCee
Q 044615 463 NFDDGHCIGNGGQGSVYKAKL----PTGEIVDVKKFHSPLP-DEMACQQEFLNEVNALTKI-RHRNIVKFYGFCSHALHS 536 (571)
Q Consensus 463 ~~~~~~~lg~G~~g~V~~~~~----~~~~~vavK~~~~~~~-~~~~~~~~~~~Ei~~l~~l-~H~niv~l~~~~~~~~~~ 536 (571)
+|++.+.||+|+||.||+++. .+++.||+|++.+... ......+.+.+|+.++.++ +||||+++++++...+..
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~ 80 (332)
T cd05614 1 NFELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQTEAKL 80 (332)
T ss_pred CceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEecCCEE
Confidence 478889999999999999873 3688999999865321 1223346688999999999 589999999999999999
Q ss_pred EEEEeccCCCChhhhhccCCCccCCCHHHHhh
Q 044615 537 FVVYEYLEMGSLAMNLSNDAAAEQFCWTKRMN 568 (571)
Q Consensus 537 ~lv~e~~~~G~L~~~l~~~~~~~~l~w~~r~~ 568 (571)
|+||||+++|+|.+++.++. .+++.....
T Consensus 81 ~lv~e~~~~g~L~~~l~~~~---~~~~~~~~~ 109 (332)
T cd05614 81 HLILDYVSGGEMFTHLYQRD---NFSEDEVRF 109 (332)
T ss_pred EEEEeCCCCCcHHHHHHHcC---CCCHHHHHH
Confidence 99999999999999997543 345544433
No 240
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=99.14 E-value=3.5e-10 Score=110.93 Aligned_cols=87 Identities=28% Similarity=0.414 Sum_probs=75.8
Q ss_pred CCCccCeeeccCcceEEEEE-cCCCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhcCCCCcccEEEEEEeCCeeEEEEe
Q 044615 463 NFDDGHCIGNGGQGSVYKAK-LPTGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKIRHRNIVKFYGFCSHALHSFVVYE 541 (571)
Q Consensus 463 ~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~e 541 (571)
+|+..+.||+|+||.||+|. ..+++.||+|.+..... ....+++.+|++++++++||||+++++++...+..++|||
T Consensus 2 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~--~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 79 (279)
T cd06619 2 DIQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDIT--VELQKQIMSELEILYKCDSPYIIGFYGAFFVENRISICTE 79 (279)
T ss_pred cchheeeeccCCCeEEEEEEEcCCCcEEEEEEEecCCC--hHHHHHHHHHHHHHHhCCCCCeeeEEEEEEECCEEEEEEe
Confidence 57888999999999999998 56889999999865422 2335679999999999999999999999999999999999
Q ss_pred ccCCCChhhh
Q 044615 542 YLEMGSLAMN 551 (571)
Q Consensus 542 ~~~~G~L~~~ 551 (571)
|+++|+|..+
T Consensus 80 ~~~~~~l~~~ 89 (279)
T cd06619 80 FMDGGSLDVY 89 (279)
T ss_pred cCCCCChHHh
Confidence 9999999654
No 241
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=99.14 E-value=2.5e-10 Score=113.77 Aligned_cols=103 Identities=18% Similarity=0.277 Sum_probs=82.4
Q ss_pred cCCCccCeeeccCcceEEEEEc-CCCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhcCCCCcccEEEEEEeCCeeEEEE
Q 044615 462 NNFDDGHCIGNGGQGSVYKAKL-PTGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKIRHRNIVKFYGFCSHALHSFVVY 540 (571)
Q Consensus 462 ~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~ 540 (571)
++|...+.||+|+||.||+|+. .+++.||+|.+...... .....+.+|++++++++||||+++++++...+..|+||
T Consensus 6 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 83 (309)
T cd07872 6 ETYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHEE--GAPCTAIREVSLLKDLKHANIVTLHDIVHTDKSLTLVF 83 (309)
T ss_pred CceEEEEEecccCCEEEEEEEecCCCCeEEEEEeeccccC--CcchhHHHHHHHHHhCCCCCcceEEEEEeeCCeEEEEE
Confidence 4688899999999999999984 47889999998754322 22346789999999999999999999999999999999
Q ss_pred eccCCCChhhhhccCCCccCCCHHHHhhh
Q 044615 541 EYLEMGSLAMNLSNDAAAEQFCWTKRMNA 569 (571)
Q Consensus 541 e~~~~G~L~~~l~~~~~~~~l~w~~r~~i 569 (571)
||+++ +|.+++...+. .+++.....+
T Consensus 84 e~~~~-~l~~~~~~~~~--~~~~~~~~~~ 109 (309)
T cd07872 84 EYLDK-DLKQYMDDCGN--IMSMHNVKIF 109 (309)
T ss_pred eCCCC-CHHHHHHhcCC--CCCHHHHHHH
Confidence 99985 88888865432 3555554443
No 242
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=99.14 E-value=1.7e-10 Score=112.68 Aligned_cols=106 Identities=25% Similarity=0.372 Sum_probs=84.2
Q ss_pred HccCCCccCeeeccCcceEEEEE-cCCCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhc-CCCCcccEEEEEEeC----
Q 044615 460 ATNNFDDGHCIGNGGQGSVYKAK-LPTGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKI-RHRNIVKFYGFCSHA---- 533 (571)
Q Consensus 460 ~~~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l-~H~niv~l~~~~~~~---- 533 (571)
+.+.|+..+.||+|+||.||+|. ..+++.||+|.+..... ....+.+|+.++.++ +||||+++++++...
T Consensus 4 ~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~----~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~ 79 (272)
T cd06637 4 PAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGD----EEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPG 79 (272)
T ss_pred hhhhhhHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcCCc----cHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCC
Confidence 45668888999999999999998 45789999999865432 235688999999998 799999999998753
Q ss_pred --CeeEEEEeccCCCChhhhhccCCCccCCCHHHHhhhc
Q 044615 534 --LHSFVVYEYLEMGSLAMNLSNDAAAEQFCWTKRMNAI 570 (571)
Q Consensus 534 --~~~~lv~e~~~~G~L~~~l~~~~~~~~l~w~~r~~ia 570 (571)
...|+||||+++|+|.+++..... ..+.|.....++
T Consensus 80 ~~~~~~iv~e~~~~~~L~~~l~~~~~-~~l~~~~~~~~~ 117 (272)
T cd06637 80 MDDQLWLVMEFCGAGSVTDLIKNTKG-NTLKEEWIAYIC 117 (272)
T ss_pred CCcEEEEEEEcCCCCcHHHHHHhccC-CCCCHHHHHHHH
Confidence 468999999999999999975322 346776655543
No 243
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=99.14 E-value=2.4e-10 Score=113.11 Aligned_cols=102 Identities=25% Similarity=0.348 Sum_probs=86.5
Q ss_pred cCCCccCeeeccCcceEEEEE-cCCCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhcCCCCcccEEEEEEeCCeeEEEE
Q 044615 462 NNFDDGHCIGNGGQGSVYKAK-LPTGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKIRHRNIVKFYGFCSHALHSFVVY 540 (571)
Q Consensus 462 ~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~ 540 (571)
..|+..+.||.|+||.||+|. ..+++.||+|.+...... ..+.+.+|+++++.++|||++++++++...+..|+||
T Consensus 19 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~---~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 95 (296)
T cd06655 19 KKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQP---KKELIINEILVMKELKNPNIVNFLDSFLVGDELFVVM 95 (296)
T ss_pred ceEEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEecccCc---hHHHHHHHHHHHHhcCCCceeeeeeeEecCceEEEEE
Confidence 358889999999999999998 568999999998654322 2467889999999999999999999999999999999
Q ss_pred eccCCCChhhhhccCCCccCCCHHHHhhhc
Q 044615 541 EYLEMGSLAMNLSNDAAAEQFCWTKRMNAI 570 (571)
Q Consensus 541 e~~~~G~L~~~l~~~~~~~~l~w~~r~~ia 570 (571)
||+++|+|.+++.+. .++|.++..|+
T Consensus 96 e~~~~~~L~~~~~~~----~l~~~~~~~i~ 121 (296)
T cd06655 96 EYLAGGSLTDVVTET----CMDEAQIAAVC 121 (296)
T ss_pred EecCCCcHHHHHHhc----CCCHHHHHHHH
Confidence 999999999988642 46777776653
No 244
>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development
Probab=99.14 E-value=4.2e-10 Score=109.54 Aligned_cols=105 Identities=21% Similarity=0.309 Sum_probs=84.0
Q ss_pred cCCCccCeeeccCcceEEEEE-cCCCCEEEEEEccCCCCC--chHhHHHHHHHHHHHhhcCCCCcccEEEEEEe--CCee
Q 044615 462 NNFDDGHCIGNGGQGSVYKAK-LPTGEIVDVKKFHSPLPD--EMACQQEFLNEVNALTKIRHRNIVKFYGFCSH--ALHS 536 (571)
Q Consensus 462 ~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~--~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~--~~~~ 536 (571)
.+|+..+.||+|+||.||+|. ..++..||+|.+...... ..+..+.+.+|+.++++++||||+++++++.+ ....
T Consensus 2 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (266)
T cd06651 2 INWRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRDRAEKTL 81 (266)
T ss_pred CCccccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEcCCCCEE
Confidence 368899999999999999998 457899999998654322 22345678999999999999999999999875 3678
Q ss_pred EEEEeccCCCChhhhhccCCCccCCCHHHHhhh
Q 044615 537 FVVYEYLEMGSLAMNLSNDAAAEQFCWTKRMNA 569 (571)
Q Consensus 537 ~lv~e~~~~G~L~~~l~~~~~~~~l~w~~r~~i 569 (571)
+++|||+++++|.+++.... .+++.....+
T Consensus 82 ~l~~e~~~~~~L~~~l~~~~---~l~~~~~~~~ 111 (266)
T cd06651 82 TIFMEYMPGGSVKDQLKAYG---ALTESVTRKY 111 (266)
T ss_pred EEEEeCCCCCcHHHHHHHcC---CCCHHHHHHH
Confidence 89999999999999997532 3566655544
No 245
>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily
Probab=99.13 E-value=2.4e-10 Score=113.73 Aligned_cols=106 Identities=26% Similarity=0.324 Sum_probs=85.9
Q ss_pred cCCCccCeeeccCcceEEEEEc-CCCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhcCCCCcccEEEEEEeCCeeEEEE
Q 044615 462 NNFDDGHCIGNGGQGSVYKAKL-PTGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKIRHRNIVKFYGFCSHALHSFVVY 540 (571)
Q Consensus 462 ~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~ 540 (571)
..|+..+.||+|+||.||+|.. .+++.||+|.+...........+++.+|++++++++||||++++++|.+.+..|+||
T Consensus 15 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~ 94 (307)
T cd06607 15 KLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYKGCYLREHTAWLVM 94 (307)
T ss_pred hhhhhheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCCCEEEEEEEEEeCCeEEEEH
Confidence 3488889999999999999984 578999999987544444444567899999999999999999999999999999999
Q ss_pred eccCCCChhhhhccCCCccCCCHHHHhhhc
Q 044615 541 EYLEMGSLAMNLSNDAAAEQFCWTKRMNAI 570 (571)
Q Consensus 541 e~~~~G~L~~~l~~~~~~~~l~w~~r~~ia 570 (571)
||++ |++.+++..... .++|..+..++
T Consensus 95 e~~~-g~l~~~~~~~~~--~l~~~~~~~~~ 121 (307)
T cd06607 95 EYCL-GSASDILEVHKK--PLQEVEIAAIC 121 (307)
T ss_pred HhhC-CCHHHHHHHccc--CCCHHHHHHHH
Confidence 9997 577777754322 47777766553
No 246
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=99.13 E-value=1.5e-10 Score=114.28 Aligned_cols=113 Identities=25% Similarity=0.320 Sum_probs=89.1
Q ss_pred HHHHHHHccCCCccCeeeccCcceEEEEE-cCCCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhc-CCCCcccEEEEEE
Q 044615 454 HEEIIRATNNFDDGHCIGNGGQGSVYKAK-LPTGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKI-RHRNIVKFYGFCS 531 (571)
Q Consensus 454 ~~~~~~~~~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l-~H~niv~l~~~~~ 531 (571)
.+++..++++|++.+.||+|+||.||+|. ..+++.+|+|.+..... ....+.+|+.++.++ +|||++++++++.
T Consensus 14 ~~~~~~~~~~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~~----~~~~~~~e~~~l~~l~~h~ni~~~~~~~~ 89 (291)
T cd06639 14 LESLGDPTDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPISD----VDEEIEAEYNILQSLPNHPNVVKFYGMFY 89 (291)
T ss_pred cccCCCCCCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEeccccc----HHHHHHHHHHHHHHhcCCCCeEEEEEEEE
Confidence 34555678889999999999999999999 45789999999864321 235678899999998 8999999999997
Q ss_pred eC-----CeeEEEEeccCCCChhhhhccCC-CccCCCHHHHhhhc
Q 044615 532 HA-----LHSFVVYEYLEMGSLAMNLSNDA-AAEQFCWTKRMNAI 570 (571)
Q Consensus 532 ~~-----~~~~lv~e~~~~G~L~~~l~~~~-~~~~l~w~~r~~ia 570 (571)
.. +..|+||||+++|+|.++++... ....+.|.....|+
T Consensus 90 ~~~~~~~~~~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~ 134 (291)
T cd06639 90 KADKLVGGQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYIL 134 (291)
T ss_pred eccccCCCeeEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHH
Confidence 54 35899999999999999886421 22356777766554
No 247
>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase). Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It
Probab=99.13 E-value=2.8e-10 Score=111.69 Aligned_cols=108 Identities=19% Similarity=0.267 Sum_probs=87.2
Q ss_pred ccCCCccCeeeccCcceEEEEEcCC-----CCEEEEEEccCCCCCchHhHHHHHHHHHHHhhcCCCCcccEEEEEEe-CC
Q 044615 461 TNNFDDGHCIGNGGQGSVYKAKLPT-----GEIVDVKKFHSPLPDEMACQQEFLNEVNALTKIRHRNIVKFYGFCSH-AL 534 (571)
Q Consensus 461 ~~~~~~~~~lg~G~~g~V~~~~~~~-----~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~-~~ 534 (571)
.++|...+.||+|+||.||+|.... +..||+|.+.... .....+.+.+|+.++++++||||+++++++.. +.
T Consensus 5 ~~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~--~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~ 82 (280)
T cd05043 5 RDRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHA--SEIQVTLLLQESCLLYGLSHQNILPILHVCIEDGE 82 (280)
T ss_pred hhheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCCC--CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCC
Confidence 3468888999999999999998543 6789999986432 23446778999999999999999999998876 46
Q ss_pred eeEEEEeccCCCChhhhhccCCCc-----cCCCHHHHhhhc
Q 044615 535 HSFVVYEYLEMGSLAMNLSNDAAA-----EQFCWTKRMNAI 570 (571)
Q Consensus 535 ~~~lv~e~~~~G~L~~~l~~~~~~-----~~l~w~~r~~ia 570 (571)
..++++||+++|+|.+++...... ..++|.+++.|+
T Consensus 83 ~~~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~ 123 (280)
T cd05043 83 PPFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMA 123 (280)
T ss_pred CCEEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHH
Confidence 789999999999999999754322 468888877765
No 248
>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou
Probab=99.13 E-value=2.5e-10 Score=112.41 Aligned_cols=105 Identities=26% Similarity=0.358 Sum_probs=89.9
Q ss_pred HccCCCccCeeeccCcceEEEEEcC-CCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhcCCCCcccEEEEEEeCCeeEE
Q 044615 460 ATNNFDDGHCIGNGGQGSVYKAKLP-TGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKIRHRNIVKFYGFCSHALHSFV 538 (571)
Q Consensus 460 ~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~l 538 (571)
.+..|+..+.+|+|+||.||+|... ++..||+|.+..... ..+.+.+|++++++++|||++++++++......|+
T Consensus 17 ~~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~----~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l 92 (286)
T cd06614 17 PRELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQ----NKELIINEILIMKDCKHPNIVDYYDSYLVGDELWV 92 (286)
T ss_pred ccccchHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCch----hHHHHHHHHHHHHHCCCCCeeEEEEEEEECCEEEE
Confidence 4456888899999999999999954 788999999975432 35678899999999999999999999999999999
Q ss_pred EEeccCCCChhhhhccCCCccCCCHHHHhhhc
Q 044615 539 VYEYLEMGSLAMNLSNDAAAEQFCWTKRMNAI 570 (571)
Q Consensus 539 v~e~~~~G~L~~~l~~~~~~~~l~w~~r~~ia 570 (571)
|+||+++++|.+++.... ..++|..+..|+
T Consensus 93 v~e~~~~~~L~~~l~~~~--~~l~~~~~~~i~ 122 (286)
T cd06614 93 VMEYMDGGSLTDIITQNF--VRMNEPQIAYVC 122 (286)
T ss_pred EEeccCCCcHHHHHHHhc--cCCCHHHHHHHH
Confidence 999999999999998653 368888877765
No 249
>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi
Probab=99.13 E-value=2.1e-10 Score=113.34 Aligned_cols=101 Identities=25% Similarity=0.341 Sum_probs=84.6
Q ss_pred cCCCccCeeeccCcceEEEEE-cCCCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhcCCCCcccEEEEEEeCCeeEEEE
Q 044615 462 NNFDDGHCIGNGGQGSVYKAK-LPTGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKIRHRNIVKFYGFCSHALHSFVVY 540 (571)
Q Consensus 462 ~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~ 540 (571)
++|...+.||+|+||.||++. ..++..||+|.+..... ...+.+.+|+.++++++|||++++++++...+..|+|+
T Consensus 19 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~---~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~ 95 (293)
T cd06647 19 KKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQ---PKKELIINEILVMRENKHPNIVNYLDSYLVGDELWVVM 95 (293)
T ss_pred hhceeeeEecCCCCeEEEEEEEcCCCCEEEEEEeccccc---hHHHHHHHHHHHHhhcCCCCeeehhheeeeCCcEEEEE
Confidence 468889999999999999998 45788999999864322 23467889999999999999999999999999999999
Q ss_pred eccCCCChhhhhccCCCccCCCHHHHhhh
Q 044615 541 EYLEMGSLAMNLSNDAAAEQFCWTKRMNA 569 (571)
Q Consensus 541 e~~~~G~L~~~l~~~~~~~~l~w~~r~~i 569 (571)
||+++|+|.+++.+. .++|.++..|
T Consensus 96 e~~~~~~L~~~~~~~----~l~~~~~~~i 120 (293)
T cd06647 96 EYLAGGSLTDVVTET----CMDEGQIAAV 120 (293)
T ss_pred ecCCCCcHHHHHhhc----CCCHHHHHHH
Confidence 999999999999743 3566665554
No 250
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=99.13 E-value=3.1e-10 Score=112.67 Aligned_cols=102 Identities=21% Similarity=0.295 Sum_probs=82.1
Q ss_pred cCCCccCeeeccCcceEEEEEc-CCCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhcCCCCcccEEEEEEeCCeeEEEE
Q 044615 462 NNFDDGHCIGNGGQGSVYKAKL-PTGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKIRHRNIVKFYGFCSHALHSFVVY 540 (571)
Q Consensus 462 ~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~ 540 (571)
++|+..+.||+|+||.||+|.. .+++.||+|.+....... ....+.+|+.++++++||||+++++++...+..|+||
T Consensus 6 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~~--~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~lv~ 83 (301)
T cd07873 6 ETYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEEG--APCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVF 83 (301)
T ss_pred cceEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEecccccC--chhHHHHHHHHHHhcCCCCcceEEEEEecCCeEEEEE
Confidence 4688999999999999999984 478999999987543222 2346778999999999999999999999999999999
Q ss_pred eccCCCChhhhhccCCCccCCCHHHHhh
Q 044615 541 EYLEMGSLAMNLSNDAAAEQFCWTKRMN 568 (571)
Q Consensus 541 e~~~~G~L~~~l~~~~~~~~l~w~~r~~ 568 (571)
||++ |+|.+++..... .+++.....
T Consensus 84 e~~~-~~l~~~l~~~~~--~~~~~~~~~ 108 (301)
T cd07873 84 EYLD-KDLKQYLDDCGN--SINMHNVKL 108 (301)
T ss_pred eccc-cCHHHHHHhcCC--CCCHHHHHH
Confidence 9998 599998875432 345554443
No 251
>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron
Probab=99.13 E-value=3.4e-10 Score=113.27 Aligned_cols=104 Identities=27% Similarity=0.361 Sum_probs=85.5
Q ss_pred CCccCeeeccCcceEEEEE-cCCCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhcCCCCcccEEEEEEeCCeeEEEEec
Q 044615 464 FDDGHCIGNGGQGSVYKAK-LPTGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKIRHRNIVKFYGFCSHALHSFVVYEY 542 (571)
Q Consensus 464 ~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 542 (571)
|+..+.||+|+||.||+|+ ..++..||+|.+...........+.+.+|++++++++|||++++++++.+.+..|+||||
T Consensus 27 f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 106 (317)
T cd06635 27 FTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYKGCYLREHTAWLVMEY 106 (317)
T ss_pred hhhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCeEEEEEeC
Confidence 6778899999999999999 457899999998765444434456799999999999999999999999999999999999
Q ss_pred cCCCChhhhhccCCCccCCCHHHHhhhc
Q 044615 543 LEMGSLAMNLSNDAAAEQFCWTKRMNAI 570 (571)
Q Consensus 543 ~~~G~L~~~l~~~~~~~~l~w~~r~~ia 570 (571)
++ |++.+.+.... ..++|.++..++
T Consensus 107 ~~-g~l~~~~~~~~--~~l~~~~~~~i~ 131 (317)
T cd06635 107 CL-GSASDLLEVHK--KPLQEVEIAAIT 131 (317)
T ss_pred CC-CCHHHHHHHhc--CCCCHHHHHHHH
Confidence 97 58888776432 247888776654
No 252
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=99.13 E-value=2.2e-10 Score=115.66 Aligned_cols=103 Identities=23% Similarity=0.343 Sum_probs=80.8
Q ss_pred CCCccCeeeccCcceEEEEE-cCCCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhcCCCCcccEEEEEEeC-----Cee
Q 044615 463 NFDDGHCIGNGGQGSVYKAK-LPTGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKIRHRNIVKFYGFCSHA-----LHS 536 (571)
Q Consensus 463 ~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~-----~~~ 536 (571)
.|++.+.||+|+||.||+|. ..++..||||++...... .....++.+|++++++++||||+++++++... ...
T Consensus 1 ry~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~ 79 (338)
T cd07859 1 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEH-VSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDI 79 (338)
T ss_pred CeEEEEEEeecCCeEEEEEEECCCCCEEEEEEechhhcc-chhHHHHHHHHHHHHhCCCCCEeeecceEeccCCCCCceE
Confidence 37888999999999999999 558999999998743222 22345788999999999999999999988653 247
Q ss_pred EEEEeccCCCChhhhhccCCCccCCCHHHHhhhc
Q 044615 537 FVVYEYLEMGSLAMNLSNDAAAEQFCWTKRMNAI 570 (571)
Q Consensus 537 ~lv~e~~~~G~L~~~l~~~~~~~~l~w~~r~~ia 570 (571)
|+|||||+ ++|.+++.... .++|.....|+
T Consensus 80 ~lv~e~~~-~~L~~~l~~~~---~~~~~~~~~i~ 109 (338)
T cd07859 80 YVVFELME-SDLHQVIKAND---DLTPEHHQFFL 109 (338)
T ss_pred EEEEecCC-CCHHHHHHhcc---cCCHHHHHHHH
Confidence 99999996 68999887432 46666665543
No 253
>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi
Probab=99.13 E-value=2.9e-10 Score=110.27 Aligned_cols=107 Identities=24% Similarity=0.326 Sum_probs=85.6
Q ss_pred CCCccCeeeccCcceEEEEE-cCCCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhcCCCCcccEEEEEEe--CCeeEEE
Q 044615 463 NFDDGHCIGNGGQGSVYKAK-LPTGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKIRHRNIVKFYGFCSH--ALHSFVV 539 (571)
Q Consensus 463 ~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~--~~~~~lv 539 (571)
+|+..+.+|+|+||.||++. ..+++.||+|.+...... ....+++.+|++++++++||||+++++++.. ....|++
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~ 79 (265)
T cd08217 1 DYEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMT-EKEKQQLVSEVNILRELKHPNIVRYYDRIIDRSNQTLYIV 79 (265)
T ss_pred CceeeeeeccCCCeEEEEeeecCCCCEEEEEEEecccCC-HHHHHHHHHHHHHHHhcCCCccceeeeeeecCCCCEEEEE
Confidence 47888999999999999998 557899999998754332 3445678999999999999999999998864 4568999
Q ss_pred EeccCCCChhhhhccCC-CccCCCHHHHhhhc
Q 044615 540 YEYLEMGSLAMNLSNDA-AAEQFCWTKRMNAI 570 (571)
Q Consensus 540 ~e~~~~G~L~~~l~~~~-~~~~l~w~~r~~ia 570 (571)
|||+++|+|.+++.... ....++|...+.++
T Consensus 80 ~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~ 111 (265)
T cd08217 80 MEYCEGGDLAQLIQKCKKERKYIEEEFIWRIL 111 (265)
T ss_pred ehhccCCCHHHHHHHHhhcccCCCHHHHHHHH
Confidence 99999999999997532 23457777666553
No 254
>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1. Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto
Probab=99.13 E-value=9.4e-11 Score=114.88 Aligned_cols=106 Identities=21% Similarity=0.191 Sum_probs=88.3
Q ss_pred cCCCccCeeeccCcceEEEEE-cCCCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhcC-CCCcccEEEEEEeCCeeEEE
Q 044615 462 NNFDDGHCIGNGGQGSVYKAK-LPTGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKIR-HRNIVKFYGFCSHALHSFVV 539 (571)
Q Consensus 462 ~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~-H~niv~l~~~~~~~~~~~lv 539 (571)
++|...+.||+|+||.||+|. ..++..||+|++.+.........+.+.+|++++.+++ ||||+++++++.+.+..++|
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv 80 (280)
T cd05581 1 DDFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQDEENLYFV 80 (280)
T ss_pred CCceEeeeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHhcCCceEEEE
Confidence 368889999999999999999 4589999999987644333344567889999999998 99999999999999999999
Q ss_pred EeccCCCChhhhhccCCCccCCCHHHHhhhc
Q 044615 540 YEYLEMGSLAMNLSNDAAAEQFCWTKRMNAI 570 (571)
Q Consensus 540 ~e~~~~G~L~~~l~~~~~~~~l~w~~r~~ia 570 (571)
|||+++|+|.+++...+ .++|.....|+
T Consensus 81 ~e~~~~~~L~~~l~~~~---~l~~~~~~~i~ 108 (280)
T cd05581 81 LEYAPNGELLQYIRKYG---SLDEKCTRFYA 108 (280)
T ss_pred EcCCCCCcHHHHHHHcC---CCCHHHHHHHH
Confidence 99999999999997543 46777666553
No 255
>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent
Probab=99.13 E-value=3.5e-10 Score=110.77 Aligned_cols=101 Identities=28% Similarity=0.438 Sum_probs=83.5
Q ss_pred CCCccCeeeccCcceEEEEE-cCCCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhcC---CCCcccEEEEEEeCCeeEE
Q 044615 463 NFDDGHCIGNGGQGSVYKAK-LPTGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKIR---HRNIVKFYGFCSHALHSFV 538 (571)
Q Consensus 463 ~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~---H~niv~l~~~~~~~~~~~l 538 (571)
.|+..+.||+|+||.||+|. ..+++.||+|.+...... ...+++.+|++++++++ |||++++++++......|+
T Consensus 2 ~y~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~--~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~~~~~l 79 (277)
T cd06917 2 LYQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDTPD--DDVSDIQREVALLSQLRQSQPPNITKYYGSYLKGPRLWI 79 (277)
T ss_pred hhhhhhheeccCCceEEEEEEcCCCcEEEEEEecCCCCc--hhHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeCCEEEE
Confidence 47778899999999999999 568999999998754322 23467889999999986 9999999999999999999
Q ss_pred EEeccCCCChhhhhccCCCccCCCHHHHhhh
Q 044615 539 VYEYLEMGSLAMNLSNDAAAEQFCWTKRMNA 569 (571)
Q Consensus 539 v~e~~~~G~L~~~l~~~~~~~~l~w~~r~~i 569 (571)
||||+++|+|.++++.. .++|.....+
T Consensus 80 v~e~~~~~~L~~~~~~~----~l~~~~~~~i 106 (277)
T cd06917 80 IMEYAEGGSVRTLMKAG----PIAEKYISVI 106 (277)
T ss_pred EEecCCCCcHHHHHHcc----CCCHHHHHHH
Confidence 99999999999998643 4666655544
No 256
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a
Probab=99.13 E-value=2.1e-10 Score=110.76 Aligned_cols=102 Identities=27% Similarity=0.363 Sum_probs=86.6
Q ss_pred cCCCccCeeeccCcceEEEEEcC-CCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhcCCCCcccEEEEEEeCCeeEEEE
Q 044615 462 NNFDDGHCIGNGGQGSVYKAKLP-TGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKIRHRNIVKFYGFCSHALHSFVVY 540 (571)
Q Consensus 462 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~ 540 (571)
++|+..+.||+|+||.||+|... +++.+|+|.+.... ..+++.+|++++++++||||+++++++.+....|+++
T Consensus 3 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~-----~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~ 77 (256)
T cd06612 3 EVFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEE-----DLQEIIKEISILKQCDSPYIVKYYGSYFKNTDLWIVM 77 (256)
T ss_pred ccchhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHH-----HHHHHHHHHHHHHhCCCCcEeeeeeeeecCCcEEEEE
Confidence 56888999999999999999954 58899999986432 1578999999999999999999999999999999999
Q ss_pred eccCCCChhhhhccCCCccCCCHHHHhhhc
Q 044615 541 EYLEMGSLAMNLSNDAAAEQFCWTKRMNAI 570 (571)
Q Consensus 541 e~~~~G~L~~~l~~~~~~~~l~w~~r~~ia 570 (571)
||+++++|.+++.... ..++|.....++
T Consensus 78 e~~~~~~L~~~l~~~~--~~l~~~~~~~~~ 105 (256)
T cd06612 78 EYCGAGSVSDIMKITN--KTLTEEEIAAIL 105 (256)
T ss_pred ecCCCCcHHHHHHhCc--cCCCHHHHHHHH
Confidence 9999999999997433 356777766554
No 257
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.12 E-value=2.6e-10 Score=113.38 Aligned_cols=107 Identities=22% Similarity=0.383 Sum_probs=85.1
Q ss_pred cCCCccCeeeccCcceEEEEEc--------CCCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhc-CCCCcccEEEEEEe
Q 044615 462 NNFDDGHCIGNGGQGSVYKAKL--------PTGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKI-RHRNIVKFYGFCSH 532 (571)
Q Consensus 462 ~~~~~~~~lg~G~~g~V~~~~~--------~~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l-~H~niv~l~~~~~~ 532 (571)
.+|.+.+.||+|+||.||+|+. .++..||+|.+.... .....+++.+|+.+++.+ +||||+++++++..
T Consensus 15 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~ 92 (304)
T cd05101 15 DKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDA--TEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ 92 (304)
T ss_pred HHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeeccccc--chHHHHHHHHHHHHHHhhccCCCchheeEEEec
Confidence 4588889999999999999962 134579999986432 223356789999999999 89999999999999
Q ss_pred CCeeEEEEeccCCCChhhhhccCCC-------------ccCCCHHHHhhhc
Q 044615 533 ALHSFVVYEYLEMGSLAMNLSNDAA-------------AEQFCWTKRMNAI 570 (571)
Q Consensus 533 ~~~~~lv~e~~~~G~L~~~l~~~~~-------------~~~l~w~~r~~ia 570 (571)
....|+||||+++|+|.+++.+... ...++|.++++++
T Consensus 93 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 143 (304)
T cd05101 93 DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCT 143 (304)
T ss_pred CCceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHH
Confidence 9999999999999999999975421 2346777666554
No 258
>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi
Probab=99.12 E-value=2.8e-10 Score=110.39 Aligned_cols=97 Identities=23% Similarity=0.215 Sum_probs=80.1
Q ss_pred eeccCcceEEEEEc-CCCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhcCCCCcccEEEEEEeCCeeEEEEeccCCCCh
Q 044615 470 IGNGGQGSVYKAKL-PTGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKIRHRNIVKFYGFCSHALHSFVVYEYLEMGSL 548 (571)
Q Consensus 470 lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~G~L 548 (571)
||.|+||.||+|.. .+++.||+|.+.+.........+.+.+|++++++++||||+++++++.++...|+||||+++|+|
T Consensus 1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (262)
T cd05572 1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYRTFKDKKYIYMLMEYCLGGEL 80 (262)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCCCCEeeeeeeEEcCCccEEEEecCCCCcH
Confidence 69999999999994 46899999999765444334457799999999999999999999999999999999999999999
Q ss_pred hhhhccCCCccCCCHHHHhhh
Q 044615 549 AMNLSNDAAAEQFCWTKRMNA 569 (571)
Q Consensus 549 ~~~l~~~~~~~~l~w~~r~~i 569 (571)
.+++.+.. .+++.....+
T Consensus 81 ~~~l~~~~---~l~~~~~~~~ 98 (262)
T cd05572 81 WTILRDRG---LFDEYTARFY 98 (262)
T ss_pred HHHHhhcC---CCCHHHHHHH
Confidence 99997543 2555544443
No 259
>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke
Probab=99.12 E-value=3.2e-10 Score=112.23 Aligned_cols=108 Identities=21% Similarity=0.372 Sum_probs=86.7
Q ss_pred ccCCCccCeeeccCcceEEEEEcC-----------------CCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhcCCCCc
Q 044615 461 TNNFDDGHCIGNGGQGSVYKAKLP-----------------TGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKIRHRNI 523 (571)
Q Consensus 461 ~~~~~~~~~lg~G~~g~V~~~~~~-----------------~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~H~ni 523 (571)
.++|++.+.||+|+||.||+|... .+..||+|.+..... ....+.|.+|++++++++||||
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~--~~~~~~~~~e~~~l~~l~~~~i 81 (296)
T cd05051 4 RQPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDAS--DNAREDFLKEVKILSRLSDPNI 81 (296)
T ss_pred hhhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccC--HHHHHHHHHHHHHHHhcCCCCE
Confidence 356889999999999999998732 224589999875432 2346789999999999999999
Q ss_pred ccEEEEEEeCCeeEEEEeccCCCChhhhhccCCC--------ccCCCHHHHhhhc
Q 044615 524 VKFYGFCSHALHSFVVYEYLEMGSLAMNLSNDAA--------AEQFCWTKRMNAI 570 (571)
Q Consensus 524 v~l~~~~~~~~~~~lv~e~~~~G~L~~~l~~~~~--------~~~l~w~~r~~ia 570 (571)
+++++++...+..++||||+++|+|.+++.+... ...++|...+.++
T Consensus 82 ~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 136 (296)
T cd05051 82 ARLLGVCTVDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMA 136 (296)
T ss_pred eEEEEEEecCCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHH
Confidence 9999999999999999999999999999975431 1257777766554
No 260
>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein. Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi
Probab=99.12 E-value=4.1e-10 Score=111.14 Aligned_cols=90 Identities=30% Similarity=0.446 Sum_probs=75.8
Q ss_pred CCCccCeeeccCcceEEEEEcC------CCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhcCCCCcccEEEEEEeCCee
Q 044615 463 NFDDGHCIGNGGQGSVYKAKLP------TGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKIRHRNIVKFYGFCSHALHS 536 (571)
Q Consensus 463 ~~~~~~~lg~G~~g~V~~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~ 536 (571)
+|++.+.||+|+||.||+|... ....+|+|.+..... ....+++.+|+.+++.++||||+++++.+...+..
T Consensus 1 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~--~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 78 (290)
T cd05045 1 NLVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENAS--SSELRDLLSEFNLLKQVNHPHVIKLYGACSQDGPL 78 (290)
T ss_pred CccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCC--HHHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCCc
Confidence 4778899999999999999732 235688998865432 23356799999999999999999999999999999
Q ss_pred EEEEeccCCCChhhhhcc
Q 044615 537 FVVYEYLEMGSLAMNLSN 554 (571)
Q Consensus 537 ~lv~e~~~~G~L~~~l~~ 554 (571)
++||||+++|+|.+++..
T Consensus 79 ~lv~e~~~~~~L~~~l~~ 96 (290)
T cd05045 79 LLIVEYAKYGSLRSFLRE 96 (290)
T ss_pred EEEEEecCCCCHHHHHHh
Confidence 999999999999999864
No 261
>KOG3207 consensus Beta-tubulin folding cofactor E [Posttranslational modification, protein turnover, chaperones]
Probab=99.12 E-value=6.3e-12 Score=121.84 Aligned_cols=211 Identities=29% Similarity=0.242 Sum_probs=116.2
Q ss_pred cCCCCCCEEEcccCcCccccc-ccccCCCCCCeeecccCcCcccCC--ccccCCCCCCEEEccCCCCCccCChhhhhccC
Q 044615 118 GNLTNLVVLDLSTNKLSGSIP-LSFANLTSLSILYLYENSLCDSIP--KEIGNMNSLSILDLSSNKLNGSIPLSLANLTN 194 (571)
Q Consensus 118 ~~l~~L~~L~L~~n~i~~~~~-~~~~~l~~L~~L~L~~n~l~~~~~--~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~ 194 (571)
.++.+|+...|+++.+..... .....+++++.|||+.|-+....| .....||+|+.|+++.|++..........
T Consensus 118 sn~kkL~~IsLdn~~V~~~~~~~~~k~~~~v~~LdLS~NL~~nw~~v~~i~eqLp~Le~LNls~Nrl~~~~~s~~~~--- 194 (505)
T KOG3207|consen 118 SNLKKLREISLDNYRVEDAGIEEYSKILPNVRDLDLSRNLFHNWFPVLKIAEQLPSLENLNLSSNRLSNFISSNTTL--- 194 (505)
T ss_pred hhHHhhhheeecCccccccchhhhhhhCCcceeecchhhhHHhHHHHHHHHHhcccchhcccccccccCCccccchh---
Confidence 356778888888888752221 355678888888888887765332 33456788888888888776221111111
Q ss_pred CCcEEEccCCcccccCCccccCCCCCcEEeCccCcCcCCCC-hhhhCCCCCCEEEcccCccccccchhhccCCCCCEEEc
Q 044615 195 SLKVLYLSSNHIVGEIPLGHGMLSSLIQLTLNNNELSGQLS-PELGSLIQLEYLDLSANTFHKSIPESLSNLVKLHYLNL 273 (571)
Q Consensus 195 ~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~-~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L 273 (571)
.++.|+.|.++.|.++.... .....+|+|+.|+|..|...........-+..|++|+|
T Consensus 195 ---------------------~l~~lK~L~l~~CGls~k~V~~~~~~fPsl~~L~L~~N~~~~~~~~~~~i~~~L~~LdL 253 (505)
T KOG3207|consen 195 ---------------------LLSHLKQLVLNSCGLSWKDVQWILLTFPSLEVLYLEANEIILIKATSTKILQTLQELDL 253 (505)
T ss_pred ---------------------hhhhhheEEeccCCCCHHHHHHHHHhCCcHHHhhhhcccccceecchhhhhhHHhhccc
Confidence 23345555555555553211 12334566666666666321122222334455666666
Q ss_pred CCccCccCc-chhhhcccCCCEEEccCCcCCcc-cchh-----ccCCCCCCEEEccCCcCccc-cccccccCCCCCEEEC
Q 044615 274 SNNQFSQKI-PNKIEKLIHLSELDLSHNIFREE-IPSQ-----ICSMQSLEKLNLSHNNLSGS-IPRCFEEMHWLSCIDI 345 (571)
Q Consensus 274 s~n~l~~~~-~~~~~~l~~L~~L~Ls~n~l~~~-~~~~-----~~~l~~L~~L~Ls~n~l~~~-~p~~~~~l~~L~~L~l 345 (571)
++|++-... -...+.++.|..|+++.+.+... .|+. ...+++|+.|+++.|++... .-..+..+++|+.|.+
T Consensus 254 s~N~li~~~~~~~~~~l~~L~~Lnls~tgi~si~~~d~~s~~kt~~f~kL~~L~i~~N~I~~w~sl~~l~~l~nlk~l~~ 333 (505)
T KOG3207|consen 254 SNNNLIDFDQGYKVGTLPGLNQLNLSSTGIASIAEPDVESLDKTHTFPKLEYLNISENNIRDWRSLNHLRTLENLKHLRI 333 (505)
T ss_pred cCCcccccccccccccccchhhhhccccCcchhcCCCccchhhhcccccceeeecccCccccccccchhhccchhhhhhc
Confidence 666654221 12345566666666666665442 1211 24467777777777777421 1123344566667776
Q ss_pred cCCcCcc
Q 044615 346 SYNALQG 352 (571)
Q Consensus 346 s~N~l~~ 352 (571)
..|.++.
T Consensus 334 ~~n~ln~ 340 (505)
T KOG3207|consen 334 TLNYLNK 340 (505)
T ss_pred ccccccc
Confidence 6776653
No 262
>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu
Probab=99.12 E-value=3.7e-10 Score=110.22 Aligned_cols=106 Identities=24% Similarity=0.396 Sum_probs=82.0
Q ss_pred CCccCeeeccCcceEEEEEcC----CCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhcCCCCcccEEEEEEeCCe----
Q 044615 464 FDDGHCIGNGGQGSVYKAKLP----TGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKIRHRNIVKFYGFCSHALH---- 535 (571)
Q Consensus 464 ~~~~~~lg~G~~g~V~~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~---- 535 (571)
|.+.+.||+|+||.||+|... .+..||+|.+...... ....+.+.+|++.+++++||||+++++++.+...
T Consensus 1 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 79 (273)
T cd05035 1 LKLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHT-YSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASSLQKI 79 (273)
T ss_pred CccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCC-HHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCccccC
Confidence 567789999999999999843 2467999998754322 2345679999999999999999999999876554
Q ss_pred --eEEEEeccCCCChhhhhccCC---CccCCCHHHHhhhc
Q 044615 536 --SFVVYEYLEMGSLAMNLSNDA---AAEQFCWTKRMNAI 570 (571)
Q Consensus 536 --~~lv~e~~~~G~L~~~l~~~~---~~~~l~w~~r~~ia 570 (571)
.+++|||+++|+|.+++.... ....++|.....++
T Consensus 80 ~~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~ 119 (273)
T cd05035 80 PKPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFM 119 (273)
T ss_pred cccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHH
Confidence 799999999999999986432 22356776665543
No 263
>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory
Probab=99.12 E-value=2.5e-10 Score=112.05 Aligned_cols=105 Identities=26% Similarity=0.460 Sum_probs=85.1
Q ss_pred CCCccCeeeccCcceEEEEEc------CCCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhcCCCCcccEEEEEEeCCee
Q 044615 463 NFDDGHCIGNGGQGSVYKAKL------PTGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKIRHRNIVKFYGFCSHALHS 536 (571)
Q Consensus 463 ~~~~~~~lg~G~~g~V~~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~ 536 (571)
+|...+.||+|+||.||++.. .++..+|+|.+.... ....+.|.+|++++++++||||+++++++...+..
T Consensus 6 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~ 82 (280)
T cd05092 6 DIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEAS---ESARQDFQREAELLTVLQHQHIVRFYGVCTEGRPL 82 (280)
T ss_pred hceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCC---HHHHHHHHHHHHHHhcCCCCCCceEEEEEecCCce
Confidence 567788999999999999962 245678999886432 23456899999999999999999999999999999
Q ss_pred EEEEeccCCCChhhhhccCCC------------ccCCCHHHHhhhc
Q 044615 537 FVVYEYLEMGSLAMNLSNDAA------------AEQFCWTKRMNAI 570 (571)
Q Consensus 537 ~lv~e~~~~G~L~~~l~~~~~------------~~~l~w~~r~~ia 570 (571)
+++|||+++|+|.++++.... ...++|.+++.++
T Consensus 83 ~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 128 (280)
T cd05092 83 LMVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIA 128 (280)
T ss_pred EEEEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHH
Confidence 999999999999999975432 1347787777654
No 264
>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity
Probab=99.12 E-value=7.8e-11 Score=114.12 Aligned_cols=98 Identities=20% Similarity=0.393 Sum_probs=77.8
Q ss_pred CeeeccCcceEEEEEcC-CC-------CEEEEEEccCCCCCchHhHHHHHHHHHHHhhcCCCCcccEEEEEEeCCeeEEE
Q 044615 468 HCIGNGGQGSVYKAKLP-TG-------EIVDVKKFHSPLPDEMACQQEFLNEVNALTKIRHRNIVKFYGFCSHALHSFVV 539 (571)
Q Consensus 468 ~~lg~G~~g~V~~~~~~-~~-------~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv 539 (571)
+.||+|+||.||+|... .+ ..+|+|.+.... ....+.+..|+.+++.++|||||++++++..++..++|
T Consensus 1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~---~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv 77 (258)
T cd05078 1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSH---RNYSESFFEAASMMSQLSHKHLVLNYGVCVCGDESIMV 77 (258)
T ss_pred CCCCcccchhheeeeecccccccccccchhhHHhhcchh---HHHHHHHHHHHHHHHhCCCCChhheeeEEEeCCCcEEE
Confidence 35899999999999842 22 347888875432 23356788999999999999999999999998999999
Q ss_pred EeccCCCChhhhhccCCCccCCCHHHHhhhc
Q 044615 540 YEYLEMGSLAMNLSNDAAAEQFCWTKRMNAI 570 (571)
Q Consensus 540 ~e~~~~G~L~~~l~~~~~~~~l~w~~r~~ia 570 (571)
|||+++|+|.++++..+. .++|..++.++
T Consensus 78 ~e~~~~g~L~~~l~~~~~--~~~~~~~~~~~ 106 (258)
T cd05078 78 QEYVKFGSLDTYLKKNKN--LINISWKLEVA 106 (258)
T ss_pred EecCCCCcHHHHHhcCCC--CCCHHHHHHHH
Confidence 999999999999985443 46777766553
No 265
>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n
Probab=99.12 E-value=2.4e-10 Score=112.90 Aligned_cols=106 Identities=26% Similarity=0.498 Sum_probs=85.9
Q ss_pred cCCCccCeeeccCcceEEEEEc------CCCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhcCCCCcccEEEEEEeCCe
Q 044615 462 NNFDDGHCIGNGGQGSVYKAKL------PTGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKIRHRNIVKFYGFCSHALH 535 (571)
Q Consensus 462 ~~~~~~~~lg~G~~g~V~~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~ 535 (571)
++|...+.||+|+||.||+|+. .++..+|+|.+.... ....+.+.+|++++++++||||+++++++...+.
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 81 (291)
T cd05094 5 RDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPT---LAARKDFQREAELLTNLQHEHIVKFYGVCGDGDP 81 (291)
T ss_pred HHeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCcc---HHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCc
Confidence 3577889999999999999973 234568899886432 2334678999999999999999999999999999
Q ss_pred eEEEEeccCCCChhhhhccCCC-------------ccCCCHHHHhhhc
Q 044615 536 SFVVYEYLEMGSLAMNLSNDAA-------------AEQFCWTKRMNAI 570 (571)
Q Consensus 536 ~~lv~e~~~~G~L~~~l~~~~~-------------~~~l~w~~r~~ia 570 (571)
.++||||+++|+|.+++..... ...++|..++.|+
T Consensus 82 ~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 129 (291)
T cd05094 82 LIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIA 129 (291)
T ss_pred eEEEEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHH
Confidence 9999999999999999975321 2347888887765
No 266
>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]
Probab=99.12 E-value=5e-11 Score=120.19 Aligned_cols=103 Identities=30% Similarity=0.430 Sum_probs=86.4
Q ss_pred cCCCccCeeeccCcceEEEEEcCCCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhcCCCCcccEEEEEEeCCeeEEEEe
Q 044615 462 NNFDDGHCIGNGGQGSVYKAKLPTGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKIRHRNIVKFYGFCSHALHSFVVYE 541 (571)
Q Consensus 462 ~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~e 541 (571)
+.......||+|+||+||+|++- | .||||.+....... ...+.|..|+..+++-+|.||+=+.|||..+.. .||..
T Consensus 392 ~ev~l~~rIGsGsFGtV~Rg~wh-G-dVAVK~Lnv~~pt~-~qlqaFKnEVa~lkkTRH~NIlLFMG~~~~p~~-AIiTq 467 (678)
T KOG0193|consen 392 EEVLLGERIGSGSFGTVYRGRWH-G-DVAVKLLNVDDPTP-EQLQAFKNEVAVLKKTRHENILLFMGACMNPPL-AIITQ 467 (678)
T ss_pred HHhhccceeccccccceeecccc-c-ceEEEEEecCCCCH-HHHHHHHHHHHHHhhcchhhheeeehhhcCCce-eeeeh
Confidence 34556788999999999999973 3 59999998776554 357889999999999999999999999987776 89999
Q ss_pred ccCCCChhhhhccCCCccCCCHHHHhhhc
Q 044615 542 YLEMGSLAMNLSNDAAAEQFCWTKRMNAI 570 (571)
Q Consensus 542 ~~~~G~L~~~l~~~~~~~~l~w~~r~~ia 570 (571)
+|+|-+|+.+||..+ ..++-.+.+.||
T Consensus 468 wCeGsSLY~hlHv~e--tkfdm~~~idIA 494 (678)
T KOG0193|consen 468 WCEGSSLYTHLHVQE--TKFDMNTTIDIA 494 (678)
T ss_pred hccCchhhhhccchh--hhhhHHHHHHHH
Confidence 999999999999654 356777777766
No 267
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25
Probab=99.11 E-value=1.1e-10 Score=114.29 Aligned_cols=100 Identities=24% Similarity=0.292 Sum_probs=82.6
Q ss_pred CCccCeeeccCcceEEEEE-cCCCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhcCCCCcccEEEEEEeCCeeEEEEec
Q 044615 464 FDDGHCIGNGGQGSVYKAK-LPTGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKIRHRNIVKFYGFCSHALHSFVVYEY 542 (571)
Q Consensus 464 ~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 542 (571)
|+..+.||+|+||.||+|. ..+++.||+|.+..... ....+.+.+|++++++++||||+++++++...+..|+||||
T Consensus 6 y~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 83 (277)
T cd06642 6 FTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEA--EDEIEDIQQEITVLSQCDSPYITRYYGSYLKGTKLWIIMEY 83 (277)
T ss_pred HHHHHHhcCCCCeeEEEEEEcCCCeEEEEEEeccccc--hHHHHHHHHHHHHHHcCCCCccHhhhcccccCCceEEEEEc
Confidence 5666789999999999998 45788999999875432 23356789999999999999999999999999999999999
Q ss_pred cCCCChhhhhccCCCccCCCHHHHhhh
Q 044615 543 LEMGSLAMNLSNDAAAEQFCWTKRMNA 569 (571)
Q Consensus 543 ~~~G~L~~~l~~~~~~~~l~w~~r~~i 569 (571)
+++|+|.+++... .++|.....+
T Consensus 84 ~~~~~L~~~~~~~----~~~~~~~~~~ 106 (277)
T cd06642 84 LGGGSALDLLKPG----PLEETYIATI 106 (277)
T ss_pred cCCCcHHHHhhcC----CCCHHHHHHH
Confidence 9999999988642 3566655544
No 268
>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK
Probab=99.11 E-value=5.2e-10 Score=108.00 Aligned_cols=104 Identities=26% Similarity=0.328 Sum_probs=88.0
Q ss_pred CCCccCeeeccCcceEEEEEc-CCCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhcCCCCcccEEEEEEeC--CeeEEE
Q 044615 463 NFDDGHCIGNGGQGSVYKAKL-PTGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKIRHRNIVKFYGFCSHA--LHSFVV 539 (571)
Q Consensus 463 ~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~--~~~~lv 539 (571)
+|...+.||+|++|.||+|.. .+++.|++|++...... ....+.+.+|++++++++||||+++++.+.+. ...++|
T Consensus 1 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv 79 (260)
T cd06606 1 EWTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDS-EEELEALEREIRILSSLQHPNIVRYYGSERDEEKNTLNIF 79 (260)
T ss_pred CceeeeEeeecCceEEEEEEECCCCcEEEEEEeeccccc-hHHHHHHHHHHHHHHHcCCCCEeeEEEEEecCCCCeEEEE
Confidence 477788999999999999995 47999999998765432 23457899999999999999999999999988 889999
Q ss_pred EeccCCCChhhhhccCCCccCCCHHHHhhhc
Q 044615 540 YEYLEMGSLAMNLSNDAAAEQFCWTKRMNAI 570 (571)
Q Consensus 540 ~e~~~~G~L~~~l~~~~~~~~l~w~~r~~ia 570 (571)
|||+++++|.+++.+.. .++|..+..++
T Consensus 80 ~e~~~~~~L~~~~~~~~---~~~~~~~~~~~ 107 (260)
T cd06606 80 LEYVSGGSLSSLLKKFG---KLPEPVIRKYT 107 (260)
T ss_pred EEecCCCcHHHHHHHcC---CCCHHHHHHHH
Confidence 99999999999997543 67888777664
No 269
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=99.11 E-value=3.9e-10 Score=111.13 Aligned_cols=105 Identities=24% Similarity=0.252 Sum_probs=81.7
Q ss_pred CCCccCeeeccCcceEEEEEc-CCCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhcCCCCcccEEEEEEeC--CeeEEE
Q 044615 463 NFDDGHCIGNGGQGSVYKAKL-PTGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKIRHRNIVKFYGFCSHA--LHSFVV 539 (571)
Q Consensus 463 ~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~--~~~~lv 539 (571)
+|+..+.||.|++|.||+|.. .+++.+|+|.+...... ....++.+|++++++++||||++++++|.+. ...|+|
T Consensus 2 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~--~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv 79 (287)
T cd06621 2 KIVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPNP--DLQKQILRELEINKSCKSPYIVKYYGAFLDESSSSIGIA 79 (287)
T ss_pred ceEEEEEeccCCceEEEEEEECCCCeEEEEEEEecCCch--HHHHHHHHHHHHHHhCCCCCeeeeeeEEEccCCCeEEEE
Confidence 578889999999999999994 57889999998754322 3356789999999999999999999998653 468999
Q ss_pred EeccCCCChhhhhccCC-CccCCCHHHHhhh
Q 044615 540 YEYLEMGSLAMNLSNDA-AAEQFCWTKRMNA 569 (571)
Q Consensus 540 ~e~~~~G~L~~~l~~~~-~~~~l~w~~r~~i 569 (571)
|||+++|+|.+++.... ....+++.....|
T Consensus 80 ~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i 110 (287)
T cd06621 80 MEYCEGGSLDSIYKKVKKRGGRIGEKVLGKI 110 (287)
T ss_pred EEecCCCCHHHHHHHHHhcCCCCCHHHHHHH
Confidence 99999999998876321 1223455444433
No 270
>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the
Probab=99.11 E-value=3.6e-10 Score=111.56 Aligned_cols=101 Identities=20% Similarity=0.343 Sum_probs=81.5
Q ss_pred cCCCccCeeeccCcceEEEEEc-CCCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhcCCCCcccEEEEEEeCCeeEEEE
Q 044615 462 NNFDDGHCIGNGGQGSVYKAKL-PTGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKIRHRNIVKFYGFCSHALHSFVVY 540 (571)
Q Consensus 462 ~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~ 540 (571)
++|+..+.||+|+||.||+|.. .+++.||+|.+....... ....+.+|++++++++||||+++++++.+.+..|+||
T Consensus 5 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~--~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 82 (291)
T cd07844 5 ETYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEG--APFTAIREASLLKDLKHANIVTLHDIIHTKKTLTLVF 82 (291)
T ss_pred cceeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEecccccC--CchhHHHHHHHHhhCCCcceeeEEEEEecCCeEEEEE
Confidence 5688999999999999999994 478999999987543221 2345778999999999999999999999999999999
Q ss_pred eccCCCChhhhhccCCCccCCCHHHHh
Q 044615 541 EYLEMGSLAMNLSNDAAAEQFCWTKRM 567 (571)
Q Consensus 541 e~~~~G~L~~~l~~~~~~~~l~w~~r~ 567 (571)
||+++ +|.+++..... .+++....
T Consensus 83 e~~~~-~L~~~~~~~~~--~~~~~~~~ 106 (291)
T cd07844 83 EYLDT-DLKQYMDDCGG--GLSMHNVR 106 (291)
T ss_pred ecCCC-CHHHHHHhCCC--CCCHHHHH
Confidence 99985 99998875432 34554433
No 271
>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho
Probab=99.11 E-value=5.7e-10 Score=108.42 Aligned_cols=105 Identities=23% Similarity=0.306 Sum_probs=83.0
Q ss_pred cCCCccCeeeccCcceEEEEE-cCCCCEEEEEEccCCCC--CchHhHHHHHHHHHHHhhcCCCCcccEEEEEEeC--Cee
Q 044615 462 NNFDDGHCIGNGGQGSVYKAK-LPTGEIVDVKKFHSPLP--DEMACQQEFLNEVNALTKIRHRNIVKFYGFCSHA--LHS 536 (571)
Q Consensus 462 ~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~--~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~--~~~ 536 (571)
.+|.+.+.||+|+||.||+|. ..++..||+|.+..... ......+.+.+|++++++++||||+++++++.+. ...
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (264)
T cd06653 2 VNWRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDPEEKKL 81 (264)
T ss_pred CceeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEcCCCCEE
Confidence 468899999999999999998 45799999999854321 1223456799999999999999999999998764 468
Q ss_pred EEEEeccCCCChhhhhccCCCccCCCHHHHhhh
Q 044615 537 FVVYEYLEMGSLAMNLSNDAAAEQFCWTKRMNA 569 (571)
Q Consensus 537 ~lv~e~~~~G~L~~~l~~~~~~~~l~w~~r~~i 569 (571)
++||||+++|+|.+++.... .+++....++
T Consensus 82 ~~v~e~~~~~~L~~~~~~~~---~l~~~~~~~~ 111 (264)
T cd06653 82 SIFVEYMPGGSIKDQLKAYG---ALTENVTRRY 111 (264)
T ss_pred EEEEEeCCCCcHHHHHHHcC---CCCHHHHHHH
Confidence 89999999999999997532 2455544443
No 272
>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.11 E-value=3.5e-10 Score=113.01 Aligned_cols=107 Identities=22% Similarity=0.374 Sum_probs=85.1
Q ss_pred cCCCccCeeeccCcceEEEEEcC--------CCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhc-CCCCcccEEEEEEe
Q 044615 462 NNFDDGHCIGNGGQGSVYKAKLP--------TGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKI-RHRNIVKFYGFCSH 532 (571)
Q Consensus 462 ~~~~~~~~lg~G~~g~V~~~~~~--------~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l-~H~niv~l~~~~~~ 532 (571)
++|.+.+.||+|+||.||+|+.. ....+|+|.+..... ......+.+|+++++++ +||||+++++++..
T Consensus 12 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~--~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~ 89 (314)
T cd05099 12 DRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNAT--DKDLADLISEMELMKLIGKHKNIINLLGVCTQ 89 (314)
T ss_pred HHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCCC--hHHHHHHHHHHHHHHhccCCCCeeeEEEEEcc
Confidence 45788899999999999999731 245789999875422 23356789999999999 69999999999999
Q ss_pred CCeeEEEEeccCCCChhhhhccCCC-------------ccCCCHHHHhhhc
Q 044615 533 ALHSFVVYEYLEMGSLAMNLSNDAA-------------AEQFCWTKRMNAI 570 (571)
Q Consensus 533 ~~~~~lv~e~~~~G~L~~~l~~~~~-------------~~~l~w~~r~~ia 570 (571)
.+..|+||||+++|+|.+++..... ...++|.+.++|+
T Consensus 90 ~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 140 (314)
T cd05099 90 EGPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCA 140 (314)
T ss_pred CCceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHH
Confidence 9999999999999999999975321 2357887766654
No 273
>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.11 E-value=5e-11 Score=119.55 Aligned_cols=90 Identities=30% Similarity=0.467 Sum_probs=79.6
Q ss_pred cCCCccCeeeccCcceEEEEE-cCCCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhcCCCCcccEEEEEEeCCeeEEEE
Q 044615 462 NNFDDGHCIGNGGQGSVYKAK-LPTGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKIRHRNIVKFYGFCSHALHSFVVY 540 (571)
Q Consensus 462 ~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~ 540 (571)
..|....+||+|+.|.||.|. ..+++.||||++....... .+-..+|+.+|+..+|+|||.+++.|...+++|+||
T Consensus 273 ~~y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q~~---keLilnEi~Vm~~~~H~NiVnfl~Sylv~deLWVVM 349 (550)
T KOG0578|consen 273 SKYTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLRKQPK---KELLLNEILVMRDLHHPNIVNFLDSYLVGDELWVVM 349 (550)
T ss_pred hhhcchhhhccccccceeeeeeccCCceEEEEEEEeccCCc---hhhhHHHHHHHHhccchHHHHHHHHhcccceeEEEE
Confidence 457777889999999999998 6789999999998654333 466889999999999999999999999999999999
Q ss_pred eccCCCChhhhhcc
Q 044615 541 EYLEMGSLAMNLSN 554 (571)
Q Consensus 541 e~~~~G~L~~~l~~ 554 (571)
|||+||+|.|.+..
T Consensus 350 Eym~ggsLTDvVt~ 363 (550)
T KOG0578|consen 350 EYMEGGSLTDVVTK 363 (550)
T ss_pred eecCCCchhhhhhc
Confidence 99999999998864
No 274
>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.
Probab=99.11 E-value=3.8e-10 Score=109.14 Aligned_cols=106 Identities=17% Similarity=0.200 Sum_probs=85.1
Q ss_pred CCCccCeeeccCcceEEEEE-cCCCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhcCCCCcccEEEEEEe-CCeeEEEE
Q 044615 463 NFDDGHCIGNGGQGSVYKAK-LPTGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKIRHRNIVKFYGFCSH-ALHSFVVY 540 (571)
Q Consensus 463 ~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~-~~~~~lv~ 540 (571)
+|++.+.||+|+||.||.+. ..+++.||+|.+...... ....+.+.+|++++++++|||++++++.+.. ....|+||
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~ 79 (257)
T cd08223 1 AYCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNAS-RRERKAAEQEAQLLSQLKHPNIVAYRESWEGEDGLLYIVM 79 (257)
T ss_pred CceEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcC-HHHHHHHHHHHHHHHhCCCCCeeeeeeeecCCCCEEEEEe
Confidence 48889999999999999998 456889999999754322 2335678899999999999999999998864 44689999
Q ss_pred eccCCCChhhhhccCCCccCCCHHHHhhhc
Q 044615 541 EYLEMGSLAMNLSNDAAAEQFCWTKRMNAI 570 (571)
Q Consensus 541 e~~~~G~L~~~l~~~~~~~~l~w~~r~~ia 570 (571)
||+++|+|.+++.... ...+++.+..+++
T Consensus 80 e~~~~~~l~~~l~~~~-~~~l~~~~~~~~~ 108 (257)
T cd08223 80 GFCEGGDLYHKLKEQK-GKLLPENQVVEWF 108 (257)
T ss_pred cccCCCcHHHHHHHhc-CCCCCHHHHHHHH
Confidence 9999999999997532 2357777776654
No 275
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=99.11 E-value=3.3e-10 Score=116.03 Aligned_cols=102 Identities=17% Similarity=0.260 Sum_probs=81.4
Q ss_pred CCCccCeeeccCcceEEEEE-cCCCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhcCCCCcccEEEEEEeCC-----ee
Q 044615 463 NFDDGHCIGNGGQGSVYKAK-LPTGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKIRHRNIVKFYGFCSHAL-----HS 536 (571)
Q Consensus 463 ~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~-----~~ 536 (571)
+|+..+.||+|+||.||+|. ..+++.||||++.... ......+++.+|+++++.++||||+++++++...+ ..
T Consensus 1 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 79 (372)
T cd07853 1 DVEPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVF-QNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDPFEEI 79 (372)
T ss_pred CCcccceeeeCCCEEEEEEEECCCCCEEEEEeccccc-cchHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCccccceE
Confidence 47888999999999999999 4589999999986532 22234567889999999999999999999998776 78
Q ss_pred EEEEeccCCCChhhhhccCCCccCCCHHHHhhh
Q 044615 537 FVVYEYLEMGSLAMNLSNDAAAEQFCWTKRMNA 569 (571)
Q Consensus 537 ~lv~e~~~~G~L~~~l~~~~~~~~l~w~~r~~i 569 (571)
|+||||+. ++|.+++.... .+++.....+
T Consensus 80 ~lv~e~~~-~~l~~~~~~~~---~l~~~~~~~~ 108 (372)
T cd07853 80 YVVTELMQ-SDLHKIIVSPQ---PLSSDHVKVF 108 (372)
T ss_pred EEEeeccc-cCHHHHHhcCC---CCCHHHHHHH
Confidence 99999997 58888886432 4566554443
No 276
>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k
Probab=99.10 E-value=4.6e-10 Score=108.15 Aligned_cols=98 Identities=33% Similarity=0.486 Sum_probs=81.1
Q ss_pred CeeeccCcceEEEEEcCCCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhcCCCCcccEEEEEEeCCeeEEEEeccCCCC
Q 044615 468 HCIGNGGQGSVYKAKLPTGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKIRHRNIVKFYGFCSHALHSFVVYEYLEMGS 547 (571)
Q Consensus 468 ~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~G~ 547 (571)
+.||+|+||.||++....++.||+|.+...... ...+.|.+|++++++++||||+++++++.+....++||||+++++
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~v~~K~~~~~~~~--~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~ 78 (251)
T cd05041 1 EKIGKGNFGDVYKGVLKGNTEVAVKTCRSTLPP--DLKRKFLQEAEILKQYDHPNIVKLIGVCVQKQPIYIVMELVPGGS 78 (251)
T ss_pred CccccCCCceEEEEEEeCCCcEEEEeccccCCH--HHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCCeEEEEEcCCCCc
Confidence 368999999999999655999999998754332 345779999999999999999999999999999999999999999
Q ss_pred hhhhhccCCCccCCCHHHHhhh
Q 044615 548 LAMNLSNDAAAEQFCWTKRMNA 569 (571)
Q Consensus 548 L~~~l~~~~~~~~l~w~~r~~i 569 (571)
|.+++..... .+++...+.+
T Consensus 79 l~~~l~~~~~--~~~~~~~~~~ 98 (251)
T cd05041 79 LLTFLRKKKN--RLTVKKLLQM 98 (251)
T ss_pred HHHHHHhcCC--CCCHHHHHHH
Confidence 9999975432 4566655544
No 277
>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.10 E-value=3.9e-10 Score=113.69 Aligned_cols=106 Identities=23% Similarity=0.360 Sum_probs=85.0
Q ss_pred CCCccCeeeccCcceEEEEEcC--------CCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhc-CCCCcccEEEEEEeC
Q 044615 463 NFDDGHCIGNGGQGSVYKAKLP--------TGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKI-RHRNIVKFYGFCSHA 533 (571)
Q Consensus 463 ~~~~~~~lg~G~~g~V~~~~~~--------~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l-~H~niv~l~~~~~~~ 533 (571)
.|++.+.||+|+||.||+|+.. .+..||+|.+.... .....+++.+|+++++++ +||||++++++|...
T Consensus 13 ~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~ 90 (334)
T cd05100 13 RLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDA--TDKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD 90 (334)
T ss_pred HeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEccccc--CHHHHHHHHHHHHHHHhhcCCCCeeeeeEEEccC
Confidence 5888999999999999999731 12368999886432 223457899999999999 899999999999999
Q ss_pred CeeEEEEeccCCCChhhhhccCC-------------CccCCCHHHHhhhc
Q 044615 534 LHSFVVYEYLEMGSLAMNLSNDA-------------AAEQFCWTKRMNAI 570 (571)
Q Consensus 534 ~~~~lv~e~~~~G~L~~~l~~~~-------------~~~~l~w~~r~~ia 570 (571)
+..|++|||+++|+|.+++.... ....++|..++.++
T Consensus 91 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 140 (334)
T cd05100 91 GPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCA 140 (334)
T ss_pred CceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHH
Confidence 99999999999999999997532 12357888776654
No 278
>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex
Probab=99.10 E-value=2.6e-10 Score=112.13 Aligned_cols=105 Identities=27% Similarity=0.394 Sum_probs=84.4
Q ss_pred CCCccCeeeccCcceEEEEE-cCCCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhcCCCCcccEEEEEEeCCeeEEEEe
Q 044615 463 NFDDGHCIGNGGQGSVYKAK-LPTGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKIRHRNIVKFYGFCSHALHSFVVYE 541 (571)
Q Consensus 463 ~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~e 541 (571)
+|+..+.||+|+||.||+|+ ..+++.||||.+....... ...+.+.+|++++++++||||+++++++.+.+..++|||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e 79 (284)
T cd07860 1 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETE-GVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFE 79 (284)
T ss_pred CceeeeeecCCCceEEEEEEECCCCCEEEEEEcccccccc-ccchHHHHHHHHHHhcCCCCCcchhhhcccCCcEEEEee
Confidence 47888999999999999998 4578999999987543222 234578899999999999999999999999999999999
Q ss_pred ccCCCChhhhhccCCCccCCCHHHHhhhc
Q 044615 542 YLEMGSLAMNLSNDAAAEQFCWTKRMNAI 570 (571)
Q Consensus 542 ~~~~G~L~~~l~~~~~~~~l~w~~r~~ia 570 (571)
|+. ++|.+++..... ..++|.....++
T Consensus 80 ~~~-~~l~~~~~~~~~-~~l~~~~~~~~~ 106 (284)
T cd07860 80 FLH-QDLKKFMDASPL-SGIPLPLIKSYL 106 (284)
T ss_pred ccc-cCHHHHHHhCCC-CCCCHHHHHHHH
Confidence 996 689998875432 346776655543
No 279
>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]
Probab=99.10 E-value=6.1e-11 Score=112.98 Aligned_cols=84 Identities=30% Similarity=0.391 Sum_probs=69.4
Q ss_pred CCCccCeeeccCcceEEEEE-cCCCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhcCCCCcccEEEEEEeCC-----ee
Q 044615 463 NFDDGHCIGNGGQGSVYKAK-LPTGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKIRHRNIVKFYGFCSHAL-----HS 536 (571)
Q Consensus 463 ~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~-----~~ 536 (571)
.|...+.+|.|+||.||+|. ..+++.||||+...+.... -+|+++|+.++|||||++..+|.... ..
T Consensus 25 ~~~~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~r~k-------nrEl~im~~l~HpNIV~L~~~f~~~~~~d~~~l 97 (364)
T KOG0658|consen 25 SYEAVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDKRYK-------NRELQIMRKLDHPNIVRLLYFFSSSTESDEVYL 97 (364)
T ss_pred EEEeeEEEeecccceEEEEEEcCCCceeEEEEecCCCCcC-------cHHHHHHHhcCCcCeeeEEEEEEecCCCchhHH
Confidence 46677899999999999999 5578999999986554322 27999999999999999999997642 23
Q ss_pred EEEEeccCCCChhhhhcc
Q 044615 537 FVVYEYLEMGSLAMNLSN 554 (571)
Q Consensus 537 ~lv~e~~~~G~L~~~l~~ 554 (571)
.+||||||. +|++.++.
T Consensus 98 nlVleymP~-tL~~~~r~ 114 (364)
T KOG0658|consen 98 NLVLEYMPE-TLYRVIRH 114 (364)
T ss_pred HHHHHhchH-HHHHHHHH
Confidence 489999997 99999983
No 280
>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast
Probab=99.10 E-value=7.2e-10 Score=106.81 Aligned_cols=104 Identities=28% Similarity=0.428 Sum_probs=87.7
Q ss_pred CCCccCeeeccCcceEEEEE-cCCCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhcCCCCcccEEEEEEeCCeeEEEEe
Q 044615 463 NFDDGHCIGNGGQGSVYKAK-LPTGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKIRHRNIVKFYGFCSHALHSFVVYE 541 (571)
Q Consensus 463 ~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~e 541 (571)
+|+..+.||+|++|.||++. ..+++.||+|.+...... ....+.+.+|++++++++|||++++++++.+.+..++|||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e 79 (254)
T cd06627 1 NYQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIK-EEALKSIMQEIDLLKNLKHPNIVKYIGSIETSDSLYIILE 79 (254)
T ss_pred CceeeeEEcccCCeEEEEEEEcCCCcEEEEEEecccccC-HHHHHHHHHHHHHHHhCCCCCccEEEEEEEeCCEEEEEEe
Confidence 47788999999999999998 457889999999765432 2346789999999999999999999999999999999999
Q ss_pred ccCCCChhhhhccCCCccCCCHHHHhhhc
Q 044615 542 YLEMGSLAMNLSNDAAAEQFCWTKRMNAI 570 (571)
Q Consensus 542 ~~~~G~L~~~l~~~~~~~~l~w~~r~~ia 570 (571)
|+++++|.+++... ..++|..+..++
T Consensus 80 ~~~~~~L~~~~~~~---~~l~~~~~~~~~ 105 (254)
T cd06627 80 YAENGSLRQIIKKF---GPFPESLVAVYV 105 (254)
T ss_pred cCCCCcHHHHHHhc---cCCCHHHHHHHH
Confidence 99999999999754 356777766553
No 281
>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom
Probab=99.10 E-value=3.5e-10 Score=109.81 Aligned_cols=98 Identities=18% Similarity=0.385 Sum_probs=77.6
Q ss_pred CeeeccCcceEEEEEcCC-------------CCEEEEEEccCCCCCchHhHHHHHHHHHHHhhcCCCCcccEEEEEEeCC
Q 044615 468 HCIGNGGQGSVYKAKLPT-------------GEIVDVKKFHSPLPDEMACQQEFLNEVNALTKIRHRNIVKFYGFCSHAL 534 (571)
Q Consensus 468 ~~lg~G~~g~V~~~~~~~-------------~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~ 534 (571)
+.||+|+||.||+|.... ...||+|.+.... ......|.+|+.+++.++||||+++++++.+..
T Consensus 1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~---~~~~~~~~~~~~~l~~l~hp~iv~~~~~~~~~~ 77 (262)
T cd05077 1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSH---RDISLAFFETASMMRQVSHKHIVLLYGVCVRDV 77 (262)
T ss_pred CccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhh---hhHHHHHHHHHHHHHhCCCCCEeeEEEEEecCC
Confidence 358999999999998421 2358889876532 223457889999999999999999999999999
Q ss_pred eeEEEEeccCCCChhhhhccCCCccCCCHHHHhhhc
Q 044615 535 HSFVVYEYLEMGSLAMNLSNDAAAEQFCWTKRMNAI 570 (571)
Q Consensus 535 ~~~lv~e~~~~G~L~~~l~~~~~~~~l~w~~r~~ia 570 (571)
..++||||+++|+|..+++.... .++|..+++|+
T Consensus 78 ~~~lv~e~~~~~~l~~~~~~~~~--~~~~~~~~~i~ 111 (262)
T cd05077 78 ENIMVEEFVEFGPLDLFMHRKSD--VLTTPWKFKVA 111 (262)
T ss_pred CCEEEEecccCCCHHHHHHhcCC--CCCHHHHHHHH
Confidence 99999999999999998875433 46777666654
No 282
>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity
Probab=99.10 E-value=3.1e-10 Score=110.29 Aligned_cols=91 Identities=31% Similarity=0.426 Sum_probs=79.7
Q ss_pred CCCccCeeeccCcceEEEEEc-CCCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhcCCCCcccEEEEEEeCCeeEEEEe
Q 044615 463 NFDDGHCIGNGGQGSVYKAKL-PTGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKIRHRNIVKFYGFCSHALHSFVVYE 541 (571)
Q Consensus 463 ~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~e 541 (571)
+|+..+.||+|+||.||++.. .+++.+|+|.+...... ...+++.+|++++++++||||+++++++...+..++|+|
T Consensus 2 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~--~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e 79 (265)
T cd06605 2 DLEYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEINE--AIQKQILRELDILHKCNSPYIVGFYGAFYNNGDISICME 79 (265)
T ss_pred cchHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEecccCh--HHHHHHHHHHHHHHHCCCCchhhhheeeecCCEEEEEEE
Confidence 577888999999999999994 47899999998764322 345678999999999999999999999999999999999
Q ss_pred ccCCCChhhhhccC
Q 044615 542 YLEMGSLAMNLSND 555 (571)
Q Consensus 542 ~~~~G~L~~~l~~~ 555 (571)
|+++++|.+++...
T Consensus 80 ~~~~~~L~~~~~~~ 93 (265)
T cd06605 80 YMDGGSLDKILKEV 93 (265)
T ss_pred ecCCCcHHHHHHHc
Confidence 99999999999754
No 283
>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan
Probab=99.10 E-value=4.4e-10 Score=108.75 Aligned_cols=101 Identities=28% Similarity=0.497 Sum_probs=83.7
Q ss_pred CeeeccCcceEEEEEcC-C---CCEEEEEEccCCCCCchHhHHHHHHHHHHHhhcCCCCcccEEEEEEeCCeeEEEEecc
Q 044615 468 HCIGNGGQGSVYKAKLP-T---GEIVDVKKFHSPLPDEMACQQEFLNEVNALTKIRHRNIVKFYGFCSHALHSFVVYEYL 543 (571)
Q Consensus 468 ~~lg~G~~g~V~~~~~~-~---~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~ 543 (571)
+.||+|+||.||+|... . +..||+|.+....... ..+.+.+|++.+..++||||+++++++......++||||+
T Consensus 1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~--~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~ 78 (262)
T cd00192 1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEE--ERKDFLKEARVMKKLGHPNVVRLLGVCTEEEPLYLVLEYM 78 (262)
T ss_pred CccccCCceEEEEEEEecCCCCCceEEeEeeccccchh--HHHHHHHHHHHHhhcCCCChheeeeeecCCCceEEEEEec
Confidence 46899999999999843 3 7889999997654322 4578999999999999999999999999999999999999
Q ss_pred CCCChhhhhccCCC------ccCCCHHHHhhhc
Q 044615 544 EMGSLAMNLSNDAA------AEQFCWTKRMNAI 570 (571)
Q Consensus 544 ~~G~L~~~l~~~~~------~~~l~w~~r~~ia 570 (571)
++|+|.+++..... ...++|.++..++
T Consensus 79 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 111 (262)
T cd00192 79 EGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFA 111 (262)
T ss_pred cCCcHHHHHhhccccccccccccCCHHHHHHHH
Confidence 99999999986421 2467888777654
No 284
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=99.10 E-value=5.6e-10 Score=108.24 Aligned_cols=103 Identities=27% Similarity=0.344 Sum_probs=85.3
Q ss_pred cCCCccCeeeccCcceEEEEEc-CCCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhcCCCCcccEEEEEEeCCeeEEEE
Q 044615 462 NNFDDGHCIGNGGQGSVYKAKL-PTGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKIRHRNIVKFYGFCSHALHSFVVY 540 (571)
Q Consensus 462 ~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~ 540 (571)
++|+..+.+|+|+||.||+|.. .+++.+|+|.+...... ..+.+.+|++++++++||||+++++++.+....|++|
T Consensus 3 ~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~---~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~l~~ 79 (262)
T cd06613 3 EDYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEPGD---DFEIIQQEISMLKECRHPNIVAYFGSYLRRDKLWIVM 79 (262)
T ss_pred cceEEEEEecCCCceEEEEeEecCCCCEEEEEEEEcCchh---hHHHHHHHHHHHHhCCCCChhceEEEEEeCCEEEEEE
Confidence 5688899999999999999984 57889999999754322 3577899999999999999999999999999999999
Q ss_pred eccCCCChhhhhccCCCccCCCHHHHhhh
Q 044615 541 EYLEMGSLAMNLSNDAAAEQFCWTKRMNA 569 (571)
Q Consensus 541 e~~~~G~L~~~l~~~~~~~~l~w~~r~~i 569 (571)
||+++++|.+++.... ..++......|
T Consensus 80 e~~~~~~l~~~~~~~~--~~l~~~~~~~~ 106 (262)
T cd06613 80 EYCGGGSLQDIYQVTR--GPLSELQIAYV 106 (262)
T ss_pred eCCCCCcHHHHHHhhc--cCCCHHHHHHH
Confidence 9999999999887542 23555554443
No 285
>PHA03212 serine/threonine kinase US3; Provisional
Probab=99.10 E-value=3.9e-10 Score=115.85 Aligned_cols=96 Identities=16% Similarity=0.153 Sum_probs=80.7
Q ss_pred cCCCccCeeeccCcceEEEEE-cCCCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhcCCCCcccEEEEEEeCCeeEEEE
Q 044615 462 NNFDDGHCIGNGGQGSVYKAK-LPTGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKIRHRNIVKFYGFCSHALHSFVVY 540 (571)
Q Consensus 462 ~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~ 540 (571)
..|++.+.||+|+||.||+|. ..+++.||+|... .+.+.+|++++++++|||||++++++......++||
T Consensus 92 ~~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~---------~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~ 162 (391)
T PHA03212 92 AGFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQ---------RGGTATEAHILRAINHPSIIQLKGTFTYNKFTCLIL 162 (391)
T ss_pred CCcEEEEEEcCCCCeEEEEEEECCCCCEEEEechh---------hhhhHHHHHHHHhCCCCCCCCEeEEEEECCeeEEEE
Confidence 579999999999999999999 5689999999753 234679999999999999999999999999999999
Q ss_pred eccCCCChhhhhccCCCccCCCHHHHhhhc
Q 044615 541 EYLEMGSLAMNLSNDAAAEQFCWTKRMNAI 570 (571)
Q Consensus 541 e~~~~G~L~~~l~~~~~~~~l~w~~r~~ia 570 (571)
||+. |+|.+++.... .++|...+.|+
T Consensus 163 e~~~-~~L~~~l~~~~---~l~~~~~~~i~ 188 (391)
T PHA03212 163 PRYK-TDLYCYLAAKR---NIAICDILAIE 188 (391)
T ss_pred ecCC-CCHHHHHHhcC---CCCHHHHHHHH
Confidence 9996 68998887542 46666665543
No 286
>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase. Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions
Probab=99.10 E-value=4.2e-10 Score=109.75 Aligned_cols=104 Identities=23% Similarity=0.354 Sum_probs=82.7
Q ss_pred cCCCccCeeeccCcceEEEEEcCC----CCEEEEEEccCCCCCchHhHHHHHHHHHHHhhcCCCCcccEEEEEEeCCeeE
Q 044615 462 NNFDDGHCIGNGGQGSVYKAKLPT----GEIVDVKKFHSPLPDEMACQQEFLNEVNALTKIRHRNIVKFYGFCSHALHSF 537 (571)
Q Consensus 462 ~~~~~~~~lg~G~~g~V~~~~~~~----~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~ 537 (571)
.+|...+.||+|+||.||+|...+ ...||||....... ....+.+.+|+.++++++||||+++++++.+ +..|
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~--~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-~~~~ 82 (270)
T cd05056 6 EDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTS--PSVREKFLQEAYIMRQFDHPHIVKLIGVITE-NPVW 82 (270)
T ss_pred hhceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcCC--HHHHHHHHHHHHHHHhCCCCchhceeEEEcC-CCcE
Confidence 347788999999999999998432 34689998864432 2345689999999999999999999999875 5578
Q ss_pred EEEeccCCCChhhhhccCCCccCCCHHHHhhhc
Q 044615 538 VVYEYLEMGSLAMNLSNDAAAEQFCWTKRMNAI 570 (571)
Q Consensus 538 lv~e~~~~G~L~~~l~~~~~~~~l~w~~r~~ia 570 (571)
+||||+++|+|.+++.... ..++|..++.++
T Consensus 83 lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~ 113 (270)
T cd05056 83 IVMELAPLGELRSYLQVNK--YSLDLASLILYS 113 (270)
T ss_pred EEEEcCCCCcHHHHHHhCC--CCCCHHHHHHHH
Confidence 9999999999999997533 247888777664
No 287
>KOG1259 consensus Nischarin, modulator of integrin alpha5 subunit action [Signal transduction mechanisms; Cytoskeleton]
Probab=99.09 E-value=2.1e-11 Score=112.62 Aligned_cols=127 Identities=32% Similarity=0.373 Sum_probs=86.9
Q ss_pred CcEEEccCCcccccCCccccCCCCCcEEeCccCcCcCCCChhhhCCCCCCEEEcccCccccccchhhccCCCCCEEEcCC
Q 044615 196 LKVLYLSSNHIVGEIPLGHGMLSSLIQLTLNNNELSGQLSPELGSLIQLEYLDLSANTFHKSIPESLSNLVKLHYLNLSN 275 (571)
Q Consensus 196 L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~ 275 (571)
|+++|+|+|.|+ .+..+..-++.++.|++++|.+... ..+..+++|+.|||++|.++ .+..+-..+.+.+.|.|++
T Consensus 286 LtelDLS~N~I~-~iDESvKL~Pkir~L~lS~N~i~~v--~nLa~L~~L~~LDLS~N~Ls-~~~Gwh~KLGNIKtL~La~ 361 (490)
T KOG1259|consen 286 LTELDLSGNLIT-QIDESVKLAPKLRRLILSQNRIRTV--QNLAELPQLQLLDLSGNLLA-ECVGWHLKLGNIKTLKLAQ 361 (490)
T ss_pred hhhccccccchh-hhhhhhhhccceeEEeccccceeee--hhhhhcccceEeecccchhH-hhhhhHhhhcCEeeeehhh
Confidence 777888888776 4555566677788888888877643 23677778888888887775 3444555667777788888
Q ss_pred ccCccCcchhhhcccCCCEEEccCCcCCcc-cchhccCCCCCCEEEccCCcCcc
Q 044615 276 NQFSQKIPNKIEKLIHLSELDLSHNIFREE-IPSQICSMQSLEKLNLSHNNLSG 328 (571)
Q Consensus 276 n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~-~~~~~~~l~~L~~L~Ls~n~l~~ 328 (571)
|.+.. -..+..+-+|..||+++|+|... -...++++|.|+.+.|.+|++.+
T Consensus 362 N~iE~--LSGL~KLYSLvnLDl~~N~Ie~ldeV~~IG~LPCLE~l~L~~NPl~~ 413 (490)
T KOG1259|consen 362 NKIET--LSGLRKLYSLVNLDLSSNQIEELDEVNHIGNLPCLETLRLTGNPLAG 413 (490)
T ss_pred hhHhh--hhhhHhhhhheeccccccchhhHHHhcccccccHHHHHhhcCCCccc
Confidence 77742 23456666777788888777542 12346777788888888887764
No 288
>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi
Probab=99.09 E-value=5.1e-10 Score=108.27 Aligned_cols=97 Identities=25% Similarity=0.344 Sum_probs=77.8
Q ss_pred CeeeccCcceEEEEEc-CC---CCEEEEEEccCCCCCchHhHHHHHHHHHHHhhcCCCCcccEEEEEEeCCeeEEEEecc
Q 044615 468 HCIGNGGQGSVYKAKL-PT---GEIVDVKKFHSPLPDEMACQQEFLNEVNALTKIRHRNIVKFYGFCSHALHSFVVYEYL 543 (571)
Q Consensus 468 ~~lg~G~~g~V~~~~~-~~---~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~ 543 (571)
+.||+|+||.||+|.. .. +..+|+|.+...... ...+++.+|++++++++|||||++++++. .+..++||||+
T Consensus 1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~--~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~v~e~~ 77 (257)
T cd05060 1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIA--AGKKEFLREASVMAQLDHPCIVRLIGVCK-GEPLMLVMELA 77 (257)
T ss_pred CccCccCceeEEEeEeeccCCCcceEEEEecccccch--HHHHHHHHHHHHHHhcCCCCeeeEEEEEc-CCceEEEEEeC
Confidence 4689999999999973 22 368999998755432 34567999999999999999999999876 45679999999
Q ss_pred CCCChhhhhccCCCccCCCHHHHhhhc
Q 044615 544 EMGSLAMNLSNDAAAEQFCWTKRMNAI 570 (571)
Q Consensus 544 ~~G~L~~~l~~~~~~~~l~w~~r~~ia 570 (571)
++|+|.+++.+.. .++|..++.++
T Consensus 78 ~~~~L~~~l~~~~---~~~~~~~~~~~ 101 (257)
T cd05060 78 PLGPLLKYLKKRR---EIPVSDLKELA 101 (257)
T ss_pred CCCcHHHHHHhCC---CCCHHHHHHHH
Confidence 9999999998543 46777766654
No 289
>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina
Probab=99.09 E-value=4.4e-10 Score=109.58 Aligned_cols=86 Identities=27% Similarity=0.404 Sum_probs=71.6
Q ss_pred eeeccCcceEEEEEcC---CCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhcCCCCcccEEEEEEeCCeeEEEEeccCC
Q 044615 469 CIGNGGQGSVYKAKLP---TGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKIRHRNIVKFYGFCSHALHSFVVYEYLEM 545 (571)
Q Consensus 469 ~lg~G~~g~V~~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~ 545 (571)
.||+|+||+||+|... ....+|+|.+.... .......|.+|+++++.++||||+++++++.+....|+||||+++
T Consensus 2 ~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~~e~~~~~~l~h~nii~~~~~~~~~~~~~lv~e~~~~ 79 (269)
T cd05042 2 EIGNGWFGKVLLGEAHRGMSKARVVVKELRASA--TPDEQLLFLQEVQPYRELNHPNVLQCLGQCIESIPYLLVLEFCPL 79 (269)
T ss_pred cCCccCCceEEEEEEecCCCCeEEEEeecCccC--ChHHHHHHHHHHHHHHhCCCCCcceEEEEECCCCceEEEEEeCCC
Confidence 5899999999999732 34568888876432 223356789999999999999999999999999999999999999
Q ss_pred CChhhhhccCC
Q 044615 546 GSLAMNLSNDA 556 (571)
Q Consensus 546 G~L~~~l~~~~ 556 (571)
|+|.+++....
T Consensus 80 g~L~~~l~~~~ 90 (269)
T cd05042 80 GDLKNYLRSNR 90 (269)
T ss_pred CcHHHHHHhcc
Confidence 99999997643
No 290
>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]
Probab=99.09 E-value=1.3e-10 Score=116.11 Aligned_cols=89 Identities=28% Similarity=0.493 Sum_probs=73.6
Q ss_pred cCeeeccCcceEEEEEcCCCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhcCCCCcccEEEEEEeCCeeEEEEeccCCC
Q 044615 467 GHCIGNGGQGSVYKAKLPTGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKIRHRNIVKFYGFCSHALHSFVVYEYLEMG 546 (571)
Q Consensus 467 ~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~G 546 (571)
.+-+|+|+-|.||.|++ .++.||||+++.-+ ..+|+-|++++|||||.+.|+|.....++||||||+.|
T Consensus 129 LeWlGSGaQGAVF~Grl-~netVAVKKV~elk----------ETdIKHLRkLkH~NII~FkGVCtqsPcyCIiMEfCa~G 197 (904)
T KOG4721|consen 129 LEWLGSGAQGAVFLGRL-HNETVAVKKVRELK----------ETDIKHLRKLKHPNIITFKGVCTQSPCYCIIMEFCAQG 197 (904)
T ss_pred hhhhccCcccceeeeec-cCceehhHHHhhhh----------hhhHHHHHhccCcceeeEeeeecCCceeEEeeeccccc
Confidence 46699999999999998 47889999875321 25788899999999999999999999999999999999
Q ss_pred ChhhhhccCCCc---cCCCHHHH
Q 044615 547 SLAMNLSNDAAA---EQFCWTKR 566 (571)
Q Consensus 547 ~L~~~l~~~~~~---~~l~w~~r 566 (571)
-|+..|+.+..- .-.+|..-
T Consensus 198 qL~~VLka~~~itp~llv~Wsk~ 220 (904)
T KOG4721|consen 198 QLYEVLKAGRPITPSLLVDWSKG 220 (904)
T ss_pred cHHHHHhccCccCHHHHHHHHHH
Confidence 999999865432 22466543
No 291
>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt
Probab=99.09 E-value=4.4e-10 Score=112.86 Aligned_cols=88 Identities=22% Similarity=0.297 Sum_probs=70.3
Q ss_pred CeeeccCcceEEEEE-cCCCCEEEEEEccCCCCCchHhHHHHHHHHH-HHhhcCCCCcccEEEEEEeCCeeEEEEeccCC
Q 044615 468 HCIGNGGQGSVYKAK-LPTGEIVDVKKFHSPLPDEMACQQEFLNEVN-ALTKIRHRNIVKFYGFCSHALHSFVVYEYLEM 545 (571)
Q Consensus 468 ~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~Ei~-~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~ 545 (571)
+.||+|+||.||+|+ ..+++.||+|++.+...........+..|.. +++.++||||+++++++.+.+..|+||||+++
T Consensus 1 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~~~~~~~lv~e~~~~ 80 (325)
T cd05602 1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYING 80 (325)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEEEcCCeEEEEEeCCCC
Confidence 368999999999999 4578899999997533222222344555554 56789999999999999999999999999999
Q ss_pred CChhhhhccC
Q 044615 546 GSLAMNLSND 555 (571)
Q Consensus 546 G~L~~~l~~~ 555 (571)
|+|.+++...
T Consensus 81 ~~L~~~~~~~ 90 (325)
T cd05602 81 GELFYHLQRE 90 (325)
T ss_pred CcHHHHHHhc
Confidence 9999999754
No 292
>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]
Probab=99.08 E-value=1.8e-10 Score=121.60 Aligned_cols=104 Identities=16% Similarity=0.267 Sum_probs=82.1
Q ss_pred CCCccCeeeccCcceEEEEEcC-CCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhcC-CCCcccEEEEE-Ee---C---
Q 044615 463 NFDDGHCIGNGGQGSVYKAKLP-TGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKIR-HRNIVKFYGFC-SH---A--- 533 (571)
Q Consensus 463 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~-H~niv~l~~~~-~~---~--- 533 (571)
.+++.+.|.+|||+.||.|+.. .|..||+|++-.. +....+.+.+||.+|+.++ |||||.+++.. .. .
T Consensus 38 ~v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~---de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~~~~~ 114 (738)
T KOG1989|consen 38 RVTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVN---DEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSSNNGV 114 (738)
T ss_pred EEEEEEEEccCCcEEEEEEEecCCCceeeeeeeecC---CHHHHHHHHHHHHHHHHhcCCCceeeEeccccccccCCCce
Confidence 4667889999999999999954 4599999998543 3455788999999999997 99999999933 21 1
Q ss_pred CeeEEEEeccCCCChhhhhccCCCccCCCHHHHhhhc
Q 044615 534 LHSFVVYEYLEMGSLAMNLSNDAAAEQFCWTKRMNAI 570 (571)
Q Consensus 534 ~~~~lv~e~~~~G~L~~~l~~~~~~~~l~w~~r~~ia 570 (571)
-+++|.||||.||.|-|++..+... .|+-.+-++|+
T Consensus 115 ~EvllLmEyC~gg~Lvd~mn~Rlq~-~lte~eVLkIf 150 (738)
T KOG1989|consen 115 WEVLLLMEYCKGGSLVDFMNTRLQT-RLTEDEVLKIF 150 (738)
T ss_pred eEEEeehhhccCCcHHHHHHHHHhc-cCChHHHHHHH
Confidence 3578999999999999999855433 37777777664
No 293
>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa. Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho
Probab=99.08 E-value=6.7e-10 Score=107.49 Aligned_cols=97 Identities=21% Similarity=0.316 Sum_probs=76.6
Q ss_pred eeeccCcceEEEEEcC---CCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhcCCCCcccEEEEEEeCCeeEEEEeccCC
Q 044615 469 CIGNGGQGSVYKAKLP---TGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKIRHRNIVKFYGFCSHALHSFVVYEYLEM 545 (571)
Q Consensus 469 ~lg~G~~g~V~~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~ 545 (571)
.||+|+||.||+|... .+..||+|.+..... ....+.|.+|+.++++++||||+++++++. .+..++||||+++
T Consensus 2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~~--~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~-~~~~~lv~e~~~~ 78 (257)
T cd05115 2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENE--KSVRDEMMREAEIMHQLDNPYIVRMIGVCE-AEALMLVMEMASG 78 (257)
T ss_pred ccCCCCcccEEEEEEecCCCceeEEEEEcccccC--hHHHHHHHHHHHHHHhcCCCCeEEEEEEEc-CCCeEEEEEeCCC
Confidence 3899999999999742 455799999865422 233567999999999999999999999885 4568999999999
Q ss_pred CChhhhhccCCCccCCCHHHHhhhc
Q 044615 546 GSLAMNLSNDAAAEQFCWTKRMNAI 570 (571)
Q Consensus 546 G~L~~~l~~~~~~~~l~w~~r~~ia 570 (571)
|+|.+++.... ..+++...++++
T Consensus 79 ~~L~~~l~~~~--~~~~~~~~~~~~ 101 (257)
T cd05115 79 GPLNKFLSGKK--DEITVSNVVELM 101 (257)
T ss_pred CCHHHHHHhCC--CCCCHHHHHHHH
Confidence 99999997433 246777766654
No 294
>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1. Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.
Probab=99.08 E-value=6.1e-10 Score=110.29 Aligned_cols=107 Identities=21% Similarity=0.345 Sum_probs=84.0
Q ss_pred cCCCccCeeeccCcceEEEEEcC-CCC--EEEEEEccCCCCCchHhHHHHHHHHHHHhhc-CCCCcccEEEEEEeCCeeE
Q 044615 462 NNFDDGHCIGNGGQGSVYKAKLP-TGE--IVDVKKFHSPLPDEMACQQEFLNEVNALTKI-RHRNIVKFYGFCSHALHSF 537 (571)
Q Consensus 462 ~~~~~~~~lg~G~~g~V~~~~~~-~~~--~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l-~H~niv~l~~~~~~~~~~~ 537 (571)
++|++.+.||+|+||+||+|..+ ++. .+|+|.+.... .....+.|.+|++++.++ +||||+++++++.+.+..|
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~--~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~ 79 (297)
T cd05089 2 EDIKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFA--SENDHRDFAGELEVLCKLGHHPNIINLLGACENRGYLY 79 (297)
T ss_pred ccceeeeeecCCCcceEEEEEecCCCCcceeEEEEccccC--CHHHHHHHHHHHHHHHhhcCCCchhheEEEEccCCcce
Confidence 46888999999999999999853 443 47888876322 223356799999999999 7999999999999999999
Q ss_pred EEEeccCCCChhhhhccCCC-------------ccCCCHHHHhhhc
Q 044615 538 VVYEYLEMGSLAMNLSNDAA-------------AEQFCWTKRMNAI 570 (571)
Q Consensus 538 lv~e~~~~G~L~~~l~~~~~-------------~~~l~w~~r~~ia 570 (571)
+||||+++|+|.++++.... ...+.|...+.|+
T Consensus 80 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~ 125 (297)
T cd05089 80 IAIEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFA 125 (297)
T ss_pred EEEEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHH
Confidence 99999999999999975321 1246777666553
No 295
>PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A.
Probab=99.08 E-value=1.5e-10 Score=102.73 Aligned_cols=123 Identities=33% Similarity=0.372 Sum_probs=39.7
Q ss_pred CCCcEEeCccCcCcCCCChhhh-CCCCCCEEEcccCccccccchhhccCCCCCEEEcCCccCccCcchhhhcccCCCEEE
Q 044615 218 SSLIQLTLNNNELSGQLSPELG-SLIQLEYLDLSANTFHKSIPESLSNLVKLHYLNLSNNQFSQKIPNKIEKLIHLSELD 296 (571)
Q Consensus 218 ~~L~~L~l~~n~l~~~~~~~~~-~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~ 296 (571)
..+++|+|.+|.++.. ..++ .+.+|+.|++++|.++.. +.+..+++|+.|++++|.|+...+.....+++|+.|+
T Consensus 19 ~~~~~L~L~~n~I~~I--e~L~~~l~~L~~L~Ls~N~I~~l--~~l~~L~~L~~L~L~~N~I~~i~~~l~~~lp~L~~L~ 94 (175)
T PF14580_consen 19 VKLRELNLRGNQISTI--ENLGATLDKLEVLDLSNNQITKL--EGLPGLPRLKTLDLSNNRISSISEGLDKNLPNLQELY 94 (175)
T ss_dssp -------------------S--TT-TT--EEE-TTS--S----TT----TT--EEE--SS---S-CHHHHHH-TT--EEE
T ss_pred cccccccccccccccc--cchhhhhcCCCEEECCCCCCccc--cCccChhhhhhcccCCCCCCccccchHHhCCcCCEEE
Confidence 3455566666655532 2233 356666777777766533 3456667777777777777643222223567777777
Q ss_pred ccCCcCCcc-cchhccCCCCCCEEEccCCcCcccccc----ccccCCCCCEEEC
Q 044615 297 LSHNIFREE-IPSQICSMQSLEKLNLSHNNLSGSIPR----CFEEMHWLSCIDI 345 (571)
Q Consensus 297 Ls~n~l~~~-~~~~~~~l~~L~~L~Ls~n~l~~~~p~----~~~~l~~L~~L~l 345 (571)
+++|++... .-..+..+++|+.|+|.+|+++.. +. .+..+|+|+.||-
T Consensus 95 L~~N~I~~l~~l~~L~~l~~L~~L~L~~NPv~~~-~~YR~~vi~~lP~Lk~LD~ 147 (175)
T PF14580_consen 95 LSNNKISDLNELEPLSSLPKLRVLSLEGNPVCEK-KNYRLFVIYKLPSLKVLDG 147 (175)
T ss_dssp -TTS---SCCCCGGGGG-TT--EEE-TT-GGGGS-TTHHHHHHHH-TT-SEETT
T ss_pred CcCCcCCChHHhHHHHcCCCcceeeccCCcccch-hhHHHHHHHHcChhheeCC
Confidence 777776542 123456677777777777777632 21 3445677777653
No 296
>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki
Probab=99.08 E-value=4.1e-10 Score=108.97 Aligned_cols=96 Identities=23% Similarity=0.457 Sum_probs=76.5
Q ss_pred CeeeccCcceEEEEEcC-CC----------CEEEEEEccCCCCCchHhHHHHHHHHHHHhhcCCCCcccEEEEEEeCCee
Q 044615 468 HCIGNGGQGSVYKAKLP-TG----------EIVDVKKFHSPLPDEMACQQEFLNEVNALTKIRHRNIVKFYGFCSHALHS 536 (571)
Q Consensus 468 ~~lg~G~~g~V~~~~~~-~~----------~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~ 536 (571)
+.||+|+||.||+|..+ ++ ..+|+|.+...... ...|.+|+.++++++||||+++++++.. ...
T Consensus 1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~----~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~ 75 (259)
T cd05037 1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRD----SLAFFETASLMSQLSHKHLVKLYGVCVR-DEN 75 (259)
T ss_pred CcccccccceEEEEEEeccCCccccCCccceeeeeeccccchhh----HHHHHHHHHHHHcCCCcchhheeeEEec-CCc
Confidence 36899999999999854 33 24777876543211 4778999999999999999999999988 778
Q ss_pred EEEEeccCCCChhhhhccCCCccCCCHHHHhhhc
Q 044615 537 FVVYEYLEMGSLAMNLSNDAAAEQFCWTKRMNAI 570 (571)
Q Consensus 537 ~lv~e~~~~G~L~~~l~~~~~~~~l~w~~r~~ia 570 (571)
++||||+++|+|.+++..... .++|..++.++
T Consensus 76 ~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~~~ 107 (259)
T cd05037 76 IMVEEYVKFGPLDVFLHREKN--NVSLHWKLDVA 107 (259)
T ss_pred EEEEEcCCCCcHHHHHHhhcc--CCCHHHHHHHH
Confidence 999999999999999986443 56777776654
No 297
>smart00219 TyrKc Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily.
Probab=99.08 E-value=7.3e-10 Score=107.07 Aligned_cols=104 Identities=29% Similarity=0.474 Sum_probs=84.0
Q ss_pred CCccCeeeccCcceEEEEEcC-CC----CEEEEEEccCCCCCchHhHHHHHHHHHHHhhcCCCCcccEEEEEEeCCeeEE
Q 044615 464 FDDGHCIGNGGQGSVYKAKLP-TG----EIVDVKKFHSPLPDEMACQQEFLNEVNALTKIRHRNIVKFYGFCSHALHSFV 538 (571)
Q Consensus 464 ~~~~~~lg~G~~g~V~~~~~~-~~----~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~l 538 (571)
+++.+.||.|+||.||++... .+ ..||+|.+...... ...+.+.+|++++.+++||||+++++++.+.+..|+
T Consensus 1 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~ 78 (258)
T smart00219 1 LTLGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDADE--QQIEEFLREARIMRKLDHPNIVKLLGVCTEEEPLMI 78 (258)
T ss_pred CcccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCCh--HHHHHHHHHHHHHHhcCCCchheEEEEEcCCCeeEE
Confidence 356788999999999999843 33 88999999654322 245789999999999999999999999999999999
Q ss_pred EEeccCCCChhhhhccCCCccCCCHHHHhhhc
Q 044615 539 VYEYLEMGSLAMNLSNDAAAEQFCWTKRMNAI 570 (571)
Q Consensus 539 v~e~~~~G~L~~~l~~~~~~~~l~w~~r~~ia 570 (571)
+|||+++|+|.+++..... ..++|.+...++
T Consensus 79 i~e~~~~~~l~~~~~~~~~-~~~~~~~~~~~~ 109 (258)
T smart00219 79 VMEYMEGGDLLDYLRKNRP-KELSLSDLLSFA 109 (258)
T ss_pred EEeccCCCCHHHHHHhhhh-ccCCHHHHHHHH
Confidence 9999999999999975332 126777766553
No 298
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=99.07 E-value=4.7e-10 Score=118.72 Aligned_cols=108 Identities=21% Similarity=0.178 Sum_probs=84.5
Q ss_pred HccCCCccCeeeccCcceEEEEE-cCCCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhcCCCCcccEEEEEEeCC----
Q 044615 460 ATNNFDDGHCIGNGGQGSVYKAK-LPTGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKIRHRNIVKFYGFCSHAL---- 534 (571)
Q Consensus 460 ~~~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~---- 534 (571)
..++|.+.+.||+|+||.||+|+ ..+|+.||||++...... ......+.+|+.++..++|+||+++++.+...+
T Consensus 30 ~~~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~-~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~~~~~ 108 (496)
T PTZ00283 30 QAKKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMS-EADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKDPRNP 108 (496)
T ss_pred cCCCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccCC-HHHHHHHHHHHHHHhcCCCCcEEEeecceecccccCc
Confidence 34689999999999999999998 568999999999765433 244567889999999999999999988775432
Q ss_pred ----eeEEEEeccCCCChhhhhccCCC-ccCCCHHHHhh
Q 044615 535 ----HSFVVYEYLEMGSLAMNLSNDAA-AEQFCWTKRMN 568 (571)
Q Consensus 535 ----~~~lv~e~~~~G~L~~~l~~~~~-~~~l~w~~r~~ 568 (571)
..++||||+++|+|.++++.+.. ...+++.....
T Consensus 109 ~~~~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~ 147 (496)
T PTZ00283 109 ENVLMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGL 147 (496)
T ss_pred ccceEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHH
Confidence 36899999999999999975322 23455544433
No 299
>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re
Probab=99.07 E-value=3e-10 Score=110.21 Aligned_cols=98 Identities=27% Similarity=0.275 Sum_probs=81.7
Q ss_pred eeccCcceEEEEEcC-CCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhcCCCCcccEEEEEEeCCeeEEEEeccCCCCh
Q 044615 470 IGNGGQGSVYKAKLP-TGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKIRHRNIVKFYGFCSHALHSFVVYEYLEMGSL 548 (571)
Q Consensus 470 lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~G~L 548 (571)
||+|+||.||++... +|+.+|+|.+...........+.+.+|++++++++||||+++++.+.+....|+||||+++|+|
T Consensus 1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (265)
T cd05579 1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLYYSFQGKKNLYLVMEYLPGGDL 80 (265)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCCcchhHHHHheecCcEEEEEEecCCCCcH
Confidence 589999999999954 6999999999765433334467799999999999999999999999999999999999999999
Q ss_pred hhhhccCCCccCCCHHHHhhhc
Q 044615 549 AMNLSNDAAAEQFCWTKRMNAI 570 (571)
Q Consensus 549 ~~~l~~~~~~~~l~w~~r~~ia 570 (571)
.+++++.+ .+++..+.+|+
T Consensus 81 ~~~l~~~~---~~~~~~~~~i~ 99 (265)
T cd05579 81 ASLLENVG---SLDEDVARIYI 99 (265)
T ss_pred HHHHHHcC---CCCHHHHHHHH
Confidence 99997543 46776666654
No 300
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=99.07 E-value=4.6e-10 Score=109.62 Aligned_cols=106 Identities=27% Similarity=0.307 Sum_probs=85.2
Q ss_pred HccCCCccCeeeccCcceEEEEEc-CCCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhc-CCCCcccEEEEEEeCC---
Q 044615 460 ATNNFDDGHCIGNGGQGSVYKAKL-PTGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKI-RHRNIVKFYGFCSHAL--- 534 (571)
Q Consensus 460 ~~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l-~H~niv~l~~~~~~~~--- 534 (571)
.+++|+..+.||+|+||.||+|.. .+++.+|+|.+..... ..+++.+|+.+++++ +||||+++++++.+..
T Consensus 4 ~~~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~----~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~ 79 (275)
T cd06608 4 PTGIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIED----EEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPG 79 (275)
T ss_pred chhheeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCch----hHHHHHHHHHHHHHhcCCCChheEEEEEEecCCCC
Confidence 467899999999999999999995 4788999999875432 246789999999998 7999999999997654
Q ss_pred ---eeEEEEeccCCCChhhhhccCC-CccCCCHHHHhhh
Q 044615 535 ---HSFVVYEYLEMGSLAMNLSNDA-AAEQFCWTKRMNA 569 (571)
Q Consensus 535 ---~~~lv~e~~~~G~L~~~l~~~~-~~~~l~w~~r~~i 569 (571)
..|+||||+++|+|.+++.... ....+++.....+
T Consensus 80 ~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~ 118 (275)
T cd06608 80 NDDQLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYI 118 (275)
T ss_pred cceEEEEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHH
Confidence 4899999999999999987532 1235666665554
No 301
>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l
Probab=99.07 E-value=9e-10 Score=107.43 Aligned_cols=101 Identities=25% Similarity=0.410 Sum_probs=79.0
Q ss_pred CeeeccCcceEEEEEc-CCCC--EEEEEEccCCCCCchHhHHHHHHHHHHHhhc-CCCCcccEEEEEEeCCeeEEEEecc
Q 044615 468 HCIGNGGQGSVYKAKL-PTGE--IVDVKKFHSPLPDEMACQQEFLNEVNALTKI-RHRNIVKFYGFCSHALHSFVVYEYL 543 (571)
Q Consensus 468 ~~lg~G~~g~V~~~~~-~~~~--~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l-~H~niv~l~~~~~~~~~~~lv~e~~ 543 (571)
+.||+|+||.||+|.. .++. .+|+|.+.... .....+.+.+|++++.++ +||||+++++++...+..|+||||+
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~ 78 (270)
T cd05047 1 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYA--SKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYA 78 (270)
T ss_pred CcCCCCCCceEEEEEEcCCCCeeEEEEEEccccC--CHHHHHHHHHHHHHHHhhccCCCeeeEEEEEecCCCceEEEEeC
Confidence 3589999999999985 3454 46888876432 223356789999999999 8999999999999999999999999
Q ss_pred CCCChhhhhccCCC-------------ccCCCHHHHhhhc
Q 044615 544 EMGSLAMNLSNDAA-------------AEQFCWTKRMNAI 570 (571)
Q Consensus 544 ~~G~L~~~l~~~~~-------------~~~l~w~~r~~ia 570 (571)
++|+|.++++.... ...+.|.+...++
T Consensus 79 ~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 118 (270)
T cd05047 79 PHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFA 118 (270)
T ss_pred CCCcHHHHHHhccccccccccccccCCcCCCCHHHHHHHH
Confidence 99999999975321 1246777766653
No 302
>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase. Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki
Probab=99.07 E-value=5.4e-10 Score=107.92 Aligned_cols=101 Identities=27% Similarity=0.449 Sum_probs=82.4
Q ss_pred cCCCccCeeeccCcceEEEEEcCCCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhcCCCCcccEEEEEEeCCeeEEEEe
Q 044615 462 NNFDDGHCIGNGGQGSVYKAKLPTGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKIRHRNIVKFYGFCSHALHSFVVYE 541 (571)
Q Consensus 462 ~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~e 541 (571)
++|++.+.||+|+||.||++.. +++.||+|.+.... ..+.+.+|+.++++++|||++++++++... ..++|||
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~-~~~~~~iK~~~~~~-----~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~-~~~~v~e 78 (254)
T cd05083 6 QKLTLGEIIGEGEFGAVLQGEY-TGQKVAVKNIKCDV-----TAQAFLEETAVMTKLHHKNLVRLLGVILHN-GLYIVME 78 (254)
T ss_pred HHceeeeeeccCCCCceEeccc-CCCceEEEeecCcc-----hHHHHHHHHHHHHhCCCCCcCeEEEEEcCC-CcEEEEE
Confidence 4588899999999999999875 67889999986432 235789999999999999999999998654 4799999
Q ss_pred ccCCCChhhhhccCCCccCCCHHHHhhhc
Q 044615 542 YLEMGSLAMNLSNDAAAEQFCWTKRMNAI 570 (571)
Q Consensus 542 ~~~~G~L~~~l~~~~~~~~l~w~~r~~ia 570 (571)
|+++|+|.+++..... ..+++..+++++
T Consensus 79 ~~~~~~L~~~l~~~~~-~~~~~~~~~~~~ 106 (254)
T cd05083 79 LMSKGNLVNFLRTRGR-ALVSVIQLLQFS 106 (254)
T ss_pred CCCCCCHHHHHHhcCc-CCCCHHHHHHHH
Confidence 9999999999975432 346777766554
No 303
>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess
Probab=99.06 E-value=8e-10 Score=109.08 Aligned_cols=105 Identities=19% Similarity=0.239 Sum_probs=82.2
Q ss_pred HccCCCccCeeeccCcceEEEEE-cCCCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhcCCCCcccEEEEEEeCCeeEE
Q 044615 460 ATNNFDDGHCIGNGGQGSVYKAK-LPTGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKIRHRNIVKFYGFCSHALHSFV 538 (571)
Q Consensus 460 ~~~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~l 538 (571)
++++|...+.||+|+||.||+|. ..++..||+|.+...... .....+.+|+.++++++|+||+++++++.+.+..|+
T Consensus 3 ~~~~y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~--~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~l 80 (291)
T cd07870 3 AATSYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTEE--GVPFTAIREASLLKGLKHANIVLLHDIIHTKETLTF 80 (291)
T ss_pred ccceeEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCcC--CCcHHHHHHHHHHHhcCCCCEeEEEEEEecCCeEEE
Confidence 35679999999999999999998 457899999998654322 223457789999999999999999999999999999
Q ss_pred EEeccCCCChhhhhccCCCccCCCHHHHhhh
Q 044615 539 VYEYLEMGSLAMNLSNDAAAEQFCWTKRMNA 569 (571)
Q Consensus 539 v~e~~~~G~L~~~l~~~~~~~~l~w~~r~~i 569 (571)
||||+. +++.+++..... .+.+.+...+
T Consensus 81 v~e~~~-~~l~~~~~~~~~--~~~~~~~~~~ 108 (291)
T cd07870 81 VFEYMH-TDLAQYMIQHPG--GLHPYNVRLF 108 (291)
T ss_pred EEeccc-CCHHHHHHhCCC--CCCHHHHHHH
Confidence 999996 688777754322 3445444433
No 304
>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3. Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co
Probab=99.06 E-value=1.3e-09 Score=108.83 Aligned_cols=104 Identities=27% Similarity=0.329 Sum_probs=84.1
Q ss_pred CCccCeeeccCcceEEEEE-cCCCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhcCCCCcccEEEEEEeCCeeEEEEec
Q 044615 464 FDDGHCIGNGGQGSVYKAK-LPTGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKIRHRNIVKFYGFCSHALHSFVVYEY 542 (571)
Q Consensus 464 ~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 542 (571)
|...+.||+|+||+||+|+ ..+++.||+|.+...........+.+.+|+++++.++|||++++++++.+.+..|+||||
T Consensus 23 ~~~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 102 (313)
T cd06633 23 FVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKGCYLKEHTAWLVMEY 102 (313)
T ss_pred hhcceeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEEec
Confidence 5556789999999999998 457899999999765444434456788999999999999999999999999999999999
Q ss_pred cCCCChhhhhccCCCccCCCHHHHhhhc
Q 044615 543 LEMGSLAMNLSNDAAAEQFCWTKRMNAI 570 (571)
Q Consensus 543 ~~~G~L~~~l~~~~~~~~l~w~~r~~ia 570 (571)
+. |++.+++.... ..++|.+++.++
T Consensus 103 ~~-~~l~~~l~~~~--~~l~~~~~~~~~ 127 (313)
T cd06633 103 CL-GSASDLLEVHK--KPLQEVEIAAIT 127 (313)
T ss_pred CC-CCHHHHHHhcC--CCCCHHHHHHHH
Confidence 96 58888776433 247777766543
No 305
>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]
Probab=99.06 E-value=1.8e-10 Score=109.80 Aligned_cols=93 Identities=24% Similarity=0.445 Sum_probs=78.0
Q ss_pred cCCCccCeeeccCcceEEEEE-cCCCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhcCCCC-cccEEEEEEeCC-----
Q 044615 462 NNFDDGHCIGNGGQGSVYKAK-LPTGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKIRHRN-IVKFYGFCSHAL----- 534 (571)
Q Consensus 462 ~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~H~n-iv~l~~~~~~~~----- 534 (571)
..|+..+++|+|+||+||+|+ ..+|+.||+|++...... .+......+|+.++++++|+| ||++++++.+.+
T Consensus 11 ~~~~~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~-EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~~~~~ 89 (323)
T KOG0594|consen 11 FDYEKVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEE-EGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNNHRGI 89 (323)
T ss_pred HHHHHHHHhCCCCceEEEEEEEecCCCEEEEEEEeccccc-cCCCchhhHHHHHHHHhCCCcceEEEEeeeeeccccccc
Confidence 346777889999999999999 668999999999865432 122345679999999999999 999999999877
Q ss_pred -eeEEEEeccCCCChhhhhccCC
Q 044615 535 -HSFVVYEYLEMGSLAMNLSNDA 556 (571)
Q Consensus 535 -~~~lv~e~~~~G~L~~~l~~~~ 556 (571)
.+++|+||++. ||.+++....
T Consensus 90 ~~l~lvfe~~d~-DL~~ymd~~~ 111 (323)
T KOG0594|consen 90 GKLYLVFEFLDR-DLKKYMDSLP 111 (323)
T ss_pred ceEEEEEEeecc-cHHHHHHhcc
Confidence 89999999986 9999998644
No 306
>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage
Probab=99.06 E-value=4.5e-10 Score=109.43 Aligned_cols=85 Identities=33% Similarity=0.500 Sum_probs=70.1
Q ss_pred eeeccCcceEEEEEcCCC---CEEEEEEccCCCCCchHhHHHHHHHHHHHhhcCCCCcccEEEEEEeCCeeEEEEeccCC
Q 044615 469 CIGNGGQGSVYKAKLPTG---EIVDVKKFHSPLPDEMACQQEFLNEVNALTKIRHRNIVKFYGFCSHALHSFVVYEYLEM 545 (571)
Q Consensus 469 ~lg~G~~g~V~~~~~~~~---~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~ 545 (571)
.||+|+||.||+|...++ ..+++|.+..... ....+.|.+|+.+++.++||||++++++|.+....|+||||+++
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~~--~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~ 79 (268)
T cd05086 2 EIGNGWFGKVLLSEIYTDTGVARVVVKELKANAS--SKEQNEFLQQGDPYRILQHPNILQCLGQCVEAIPYLLVFEYCEL 79 (268)
T ss_pred cCCCCcCceEEEEEEEcCCCcceEEEEEecCCCC--hHHHHHHHHHHHHHhccCCcchhheEEEecCCCccEEEEecCCC
Confidence 589999999999974332 3466777654322 23457899999999999999999999999999999999999999
Q ss_pred CChhhhhccC
Q 044615 546 GSLAMNLSND 555 (571)
Q Consensus 546 G~L~~~l~~~ 555 (571)
|+|.+++++.
T Consensus 80 ~~L~~~l~~~ 89 (268)
T cd05086 80 GDLKSYLSQE 89 (268)
T ss_pred CcHHHHHHhh
Confidence 9999999754
No 307
>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.
Probab=99.06 E-value=8.1e-10 Score=107.66 Aligned_cols=108 Identities=19% Similarity=0.367 Sum_probs=83.2
Q ss_pred CCCccCeeeccCcceEEEEEcC--CCCEEEEEEccCCCC-------CchHhHHHHHHHHHHHhh-cCCCCcccEEEEEEe
Q 044615 463 NFDDGHCIGNGGQGSVYKAKLP--TGEIVDVKKFHSPLP-------DEMACQQEFLNEVNALTK-IRHRNIVKFYGFCSH 532 (571)
Q Consensus 463 ~~~~~~~lg~G~~g~V~~~~~~--~~~~vavK~~~~~~~-------~~~~~~~~~~~Ei~~l~~-l~H~niv~l~~~~~~ 532 (571)
+|++.+.||+|+||.||+|..+ .++.+|+|.+..... .......++.+|+.++.+ ++||||+++++++.+
T Consensus 1 ~y~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~ 80 (269)
T cd08528 1 EYAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFLE 80 (269)
T ss_pred CchhhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEcc
Confidence 4778899999999999999954 478899998864321 122345668889988865 799999999999999
Q ss_pred CCeeEEEEeccCCCChhhhhccC-CCccCCCHHHHhhhc
Q 044615 533 ALHSFVVYEYLEMGSLAMNLSND-AAAEQFCWTKRMNAI 570 (571)
Q Consensus 533 ~~~~~lv~e~~~~G~L~~~l~~~-~~~~~l~w~~r~~ia 570 (571)
.+..++||||+++++|.+++... .....+++..+++++
T Consensus 81 ~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~ 119 (269)
T cd08528 81 NDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIF 119 (269)
T ss_pred CCeEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHH
Confidence 99999999999999999988532 122346666665543
No 308
>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]
Probab=99.06 E-value=9.6e-11 Score=119.67 Aligned_cols=86 Identities=24% Similarity=0.437 Sum_probs=74.0
Q ss_pred ccCeeeccCcceEEEEEcC--CCC--EEEEEEccCCCCCchHhHHHHHHHHHHHhhcCCCCcccEEEEEEeCCeeEEEEe
Q 044615 466 DGHCIGNGGQGSVYKAKLP--TGE--IVDVKKFHSPLPDEMACQQEFLNEVNALTKIRHRNIVKFYGFCSHALHSFVVYE 541 (571)
Q Consensus 466 ~~~~lg~G~~g~V~~~~~~--~~~--~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~e 541 (571)
..+.||+|.||.|++|.+. .|+ .||||++....... ...+|.+|+.+|.+++|||+|++||+..+ ....||||
T Consensus 114 l~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~--~mddflrEas~M~~L~H~hliRLyGvVl~-qp~mMV~E 190 (1039)
T KOG0199|consen 114 LYELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNA--IMDDFLREASHMLKLQHPHLIRLYGVVLD-QPAMMVFE 190 (1039)
T ss_pred HHHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccch--hHHHHHHHHHHHHhccCcceeEEeeeecc-chhhHHhh
Confidence 3467999999999999864 454 58999998665442 46789999999999999999999999987 66789999
Q ss_pred ccCCCChhhhhcc
Q 044615 542 YLEMGSLAMNLSN 554 (571)
Q Consensus 542 ~~~~G~L~~~l~~ 554 (571)
.++.|+|.+.|++
T Consensus 191 LaplGSLldrLrk 203 (1039)
T KOG0199|consen 191 LAPLGSLLDRLRK 203 (1039)
T ss_pred hcccchHHHHHhh
Confidence 9999999999987
No 309
>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3. Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r
Probab=99.06 E-value=8.6e-10 Score=108.17 Aligned_cols=104 Identities=21% Similarity=0.303 Sum_probs=80.3
Q ss_pred cCCCccCeeeccCcceEEEEEc-CCCC----EEEEEEccCCCCCchHhHHHHHHHHHHHhhcCCCCcccEEEEEEeCCee
Q 044615 462 NNFDDGHCIGNGGQGSVYKAKL-PTGE----IVDVKKFHSPLPDEMACQQEFLNEVNALTKIRHRNIVKFYGFCSHALHS 536 (571)
Q Consensus 462 ~~~~~~~~lg~G~~g~V~~~~~-~~~~----~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~ 536 (571)
++|+..+.||+|+||.||+|.. .+++ .+|+|.+.... ......++..|+..+++++||||+++++++. ....
T Consensus 7 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~-~~~~ 83 (279)
T cd05111 7 TELRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRS--GRQTFQEITDHMLAMGSLDHAYIVRLLGICP-GASL 83 (279)
T ss_pred hhceeccccCccCCcceEEEEEcCCCCceeeEEEEeeccccc--chHHHHHHHHHHHHHhcCCCCCcceEEEEEC-CCcc
Confidence 4688889999999999999984 4555 47778775321 1233467888999999999999999999885 4557
Q ss_pred EEEEeccCCCChhhhhccCCCccCCCHHHHhhhc
Q 044615 537 FVVYEYLEMGSLAMNLSNDAAAEQFCWTKRMNAI 570 (571)
Q Consensus 537 ~lv~e~~~~G~L~~~l~~~~~~~~l~w~~r~~ia 570 (571)
++++||+++|+|.+++..... .++|...+.|+
T Consensus 84 ~~i~e~~~~gsL~~~l~~~~~--~~~~~~~~~i~ 115 (279)
T cd05111 84 QLVTQLSPLGSLLDHVRQHRD--SLDPQRLLNWC 115 (279)
T ss_pred EEEEEeCCCCcHHHHHHhccc--CCCHHHHHHHH
Confidence 899999999999999975432 47777766654
No 310
>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc
Probab=99.06 E-value=6.4e-10 Score=109.27 Aligned_cols=104 Identities=26% Similarity=0.394 Sum_probs=85.1
Q ss_pred CCccCeeeccCcceEEEEE-cCCCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhcCCCCcccEEEEEEeCCeeEEEEec
Q 044615 464 FDDGHCIGNGGQGSVYKAK-LPTGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKIRHRNIVKFYGFCSHALHSFVVYEY 542 (571)
Q Consensus 464 ~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 542 (571)
|+..+.||+|++|.||+|. ..+|..||+|++....... ...+.+.+|++++++++|||++++++++.+.+..|++|||
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~-~~~~~~~~E~~~l~~l~~~~iv~~~~~~~~~~~~~iv~e~ 79 (283)
T cd07835 1 YQKVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDE-GVPSTAIREISLLKELNHPNIVRLLDVVHSENKLYLVFEF 79 (283)
T ss_pred CchheEecCCCCeEEEEEEEcCCCCEEEEEEeecccccc-cchhHHHHHHHHHHhcCCCCccCHhheeccCCeEEEEEec
Confidence 5677899999999999998 4589999999987543222 2245688999999999999999999999999999999999
Q ss_pred cCCCChhhhhccCCCccCCCHHHHhhhc
Q 044615 543 LEMGSLAMNLSNDAAAEQFCWTKRMNAI 570 (571)
Q Consensus 543 ~~~G~L~~~l~~~~~~~~l~w~~r~~ia 570 (571)
++ ++|.+++..... ..++|..+++++
T Consensus 80 ~~-~~l~~~~~~~~~-~~~~~~~~~~~~ 105 (283)
T cd07835 80 LD-LDLKKYMDSSPL-TGLDPPLIKSYL 105 (283)
T ss_pred cC-cCHHHHHhhCCC-CCCCHHHHHHHH
Confidence 95 699999875432 357888777664
No 311
>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto
Probab=99.06 E-value=5.5e-10 Score=112.64 Aligned_cols=91 Identities=25% Similarity=0.429 Sum_probs=74.4
Q ss_pred cCCCccCeeeccCcceEEEEEc------CCCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhc-CCCCcccEEEEEEeC-
Q 044615 462 NNFDDGHCIGNGGQGSVYKAKL------PTGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKI-RHRNIVKFYGFCSHA- 533 (571)
Q Consensus 462 ~~~~~~~~lg~G~~g~V~~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l-~H~niv~l~~~~~~~- 533 (571)
+.|++.+.||+|+||.||+|.. .+++.||+|++..... ....+.+.+|+.++.++ +||||++++++|...
T Consensus 7 ~~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~--~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~~~~ 84 (337)
T cd05054 7 DRLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGAT--ASEYKALMTELKILIHIGHHLNVVNLLGACTKPG 84 (337)
T ss_pred HHhhhhcccccCcCceEEeccccccccccccceeeeeeccCCCC--HHHHHHHHHHHHHHHhhccCcchhheeeeEecCC
Confidence 3588899999999999999962 2357899999874332 23346788999999999 899999999988654
Q ss_pred CeeEEEEeccCCCChhhhhcc
Q 044615 534 LHSFVVYEYLEMGSLAMNLSN 554 (571)
Q Consensus 534 ~~~~lv~e~~~~G~L~~~l~~ 554 (571)
...+++|||+++|+|.+++..
T Consensus 85 ~~~~~v~ey~~~~~L~~~i~~ 105 (337)
T cd05054 85 GPLMVIVEYCKFGNLSNYLRS 105 (337)
T ss_pred CCEEEEEecCCCCCHHHHHHh
Confidence 568899999999999999864
No 312
>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros. Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male
Probab=99.06 E-value=3.1e-10 Score=110.53 Aligned_cols=101 Identities=24% Similarity=0.405 Sum_probs=80.8
Q ss_pred CeeeccCcceEEEEEcCC-------CCEEEEEEccCCCCCchHhHHHHHHHHHHHhhcCCCCcccEEEEEEeCCeeEEEE
Q 044615 468 HCIGNGGQGSVYKAKLPT-------GEIVDVKKFHSPLPDEMACQQEFLNEVNALTKIRHRNIVKFYGFCSHALHSFVVY 540 (571)
Q Consensus 468 ~~lg~G~~g~V~~~~~~~-------~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~ 540 (571)
+.||+|+||.||+|+..+ +..+|+|.+..... ......|.+|+.++++++||||+++++++...+..++||
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 78 (269)
T cd05044 1 NFLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGAT--DQEKKEFLKEAHLMSNFNHPNIVKLLGVCLLNEPQYIIM 78 (269)
T ss_pred CccccccceeEEeeeecccccCcccceeehhhhhhcccc--hhhHHHHHHHHHHHHhcCCCCeeeEeeeecCCCCeEEEE
Confidence 358999999999998431 25799998864321 133567899999999999999999999999999999999
Q ss_pred eccCCCChhhhhccCC----CccCCCHHHHhhhc
Q 044615 541 EYLEMGSLAMNLSNDA----AAEQFCWTKRMNAI 570 (571)
Q Consensus 541 e~~~~G~L~~~l~~~~----~~~~l~w~~r~~ia 570 (571)
||+++|+|.+++.+.. ....++|.+++.|+
T Consensus 79 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~ 112 (269)
T cd05044 79 ELMEGGDLLSYLRDARVERFGPPLLTLKELLDIC 112 (269)
T ss_pred eccCCCcHHHHHHHhhhcccCCccccHHHHHHHH
Confidence 9999999999997532 22347888777665
No 313
>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase. Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio
Probab=99.06 E-value=9e-10 Score=106.56 Aligned_cols=97 Identities=25% Similarity=0.388 Sum_probs=77.0
Q ss_pred eeeccCcceEEEEEc---CCCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhcCCCCcccEEEEEEeCCeeEEEEeccCC
Q 044615 469 CIGNGGQGSVYKAKL---PTGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKIRHRNIVKFYGFCSHALHSFVVYEYLEM 545 (571)
Q Consensus 469 ~lg~G~~g~V~~~~~---~~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~ 545 (571)
.||+|+||.||+|.. .++..+|+|++.... ......+++.+|+.++++++||||+++++++. .+..++||||+++
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~-~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~~lv~e~~~~ 79 (257)
T cd05116 2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDN-NDPALKDELLREANVMQQLDNPYIVRMIGICE-AESWMLVMELAEL 79 (257)
T ss_pred cCCCcCCcceEEeEEecCCCceEEEEEEccCCC-CcHHHHHHHHHHHHHHHhCCCCCcceEEEEEc-CCCcEEEEecCCC
Confidence 589999999999963 367889999986443 22344678999999999999999999999885 4567899999999
Q ss_pred CChhhhhccCCCccCCCHHHHhhhc
Q 044615 546 GSLAMNLSNDAAAEQFCWTKRMNAI 570 (571)
Q Consensus 546 G~L~~~l~~~~~~~~l~w~~r~~ia 570 (571)
|+|.+++.... .+++....+++
T Consensus 80 ~~L~~~l~~~~---~~~~~~~~~i~ 101 (257)
T cd05116 80 GPLNKFLQKNK---HVTEKNITELV 101 (257)
T ss_pred CcHHHHHHhcC---CCCHHHHHHHH
Confidence 99999997432 45666665553
No 314
>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=99.06 E-value=5.1e-12 Score=113.32 Aligned_cols=92 Identities=20% Similarity=0.276 Sum_probs=79.4
Q ss_pred ccCCCccCeeeccCcceEEEEE-cCCCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhcCCCCcccEEEEEEeCCeeEEE
Q 044615 461 TNNFDDGHCIGNGGQGSVYKAK-LPTGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKIRHRNIVKFYGFCSHALHSFVV 539 (571)
Q Consensus 461 ~~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv 539 (571)
.+.|++.+.||+|.|+.||++. .++|+.+|+|++....... ...++..+|++|-..++|||||++.+.+.+....|+|
T Consensus 10 ~d~y~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~-~~~e~l~rEarIC~~LqHP~IvrL~~ti~~~~~~ylv 88 (355)
T KOG0033|consen 10 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSA-RDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLV 88 (355)
T ss_pred chhhhHHHHHccCchHHHHHHHhccchHHHHHHHhhhhhhcc-ccHHHHHHHHHHHHhcCCCcEeehhhhhcccceeEEE
Confidence 3457888899999999999998 6789999999997554332 2467899999999999999999999999999999999
Q ss_pred EeccCCCChhhhhc
Q 044615 540 YEYLEMGSLAMNLS 553 (571)
Q Consensus 540 ~e~~~~G~L~~~l~ 553 (571)
+|+|+||+|+.-|-
T Consensus 89 Fe~m~G~dl~~eIV 102 (355)
T KOG0033|consen 89 FDLVTGGELFEDIV 102 (355)
T ss_pred EecccchHHHHHHH
Confidence 99999999976554
No 315
>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=99.05 E-value=1.1e-10 Score=108.89 Aligned_cols=94 Identities=21% Similarity=0.378 Sum_probs=80.2
Q ss_pred HHHHHHHccCCCccCeeeccCcceEEEEE-cCCCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhc-CCCCcccEEEEEE
Q 044615 454 HEEIIRATNNFDDGHCIGNGGQGSVYKAK-LPTGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKI-RHRNIVKFYGFCS 531 (571)
Q Consensus 454 ~~~~~~~~~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l-~H~niv~l~~~~~ 531 (571)
++++-.-|+ +.+|+|+||.|--+. ..+|..||||++.+... ..+.++.+|++++.++ .|+||++++++|+
T Consensus 75 F~d~YkLt~-----e~LGeGAyasVqtcv~i~t~~EYAVKiidKq~g---HsR~RvfREVe~f~~Cqgh~nilqLiefFE 146 (463)
T KOG0607|consen 75 FEDMYKLTS-----ELLGEGAYASVQTCVSIQTGKEYAVKIIDKQPG---HSRSRVFREVETFYQCQGHKNILQLIEFFE 146 (463)
T ss_pred HHHHHHhHH-----HHhcCccceeeeeeeeeccchhhhhhhhhcCCc---hHHHHHHHHHHHHHHhcCCccHHHHHHHhc
Confidence 456544443 579999999999888 78999999999987632 3367788999999998 6999999999999
Q ss_pred eCCeeEEEEeccCCCChhhhhccC
Q 044615 532 HALHSFVVYEYLEMGSLAMNLSND 555 (571)
Q Consensus 532 ~~~~~~lv~e~~~~G~L~~~l~~~ 555 (571)
+...+|+|||-|.||.|..+|+++
T Consensus 147 dd~~FYLVfEKm~GGplLshI~~~ 170 (463)
T KOG0607|consen 147 DDTRFYLVFEKMRGGPLLSHIQKR 170 (463)
T ss_pred ccceEEEEEecccCchHHHHHHHh
Confidence 999999999999999999999854
No 316
>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign
Probab=99.05 E-value=9.1e-10 Score=108.21 Aligned_cols=101 Identities=27% Similarity=0.369 Sum_probs=81.2
Q ss_pred CCccCeeeccCcceEEEEE-----cCCCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhcCCCCcccEEEEEEeC--Cee
Q 044615 464 FDDGHCIGNGGQGSVYKAK-----LPTGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKIRHRNIVKFYGFCSHA--LHS 536 (571)
Q Consensus 464 ~~~~~~lg~G~~g~V~~~~-----~~~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~--~~~ 536 (571)
|+..+.||+|+||+||.+. ..++..||+|.+..... ....+.|.+|++++++++||||+++++++... ...
T Consensus 6 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 83 (283)
T cd05080 6 LKKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECG--QQNTSGWKKEINILKTLYHENIVKYKGCCSEQGGKGL 83 (283)
T ss_pred ceeceecccCCCcEEEEeeEccccCCCCceEEEEEeccccC--hHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCceE
Confidence 4788999999999998764 23678899999875422 22356788999999999999999999998653 468
Q ss_pred EEEEeccCCCChhhhhccCCCccCCCHHHHhhhc
Q 044615 537 FVVYEYLEMGSLAMNLSNDAAAEQFCWTKRMNAI 570 (571)
Q Consensus 537 ~lv~e~~~~G~L~~~l~~~~~~~~l~w~~r~~ia 570 (571)
|+||||+++|+|.+++... .++|.++..|+
T Consensus 84 ~lv~e~~~~~~l~~~~~~~----~l~~~~~~~i~ 113 (283)
T cd05080 84 QLIMEYVPLGSLRDYLPKH----KLNLAQLLLFA 113 (283)
T ss_pred EEEecCCCCCCHHHHHHHc----CCCHHHHHHHH
Confidence 8999999999999999743 37787777664
No 317
>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of
Probab=99.05 E-value=5.6e-10 Score=112.35 Aligned_cols=96 Identities=21% Similarity=0.233 Sum_probs=74.0
Q ss_pred eeccCcceEEEEE-cCCCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhc---CCCCcccEEEEEEeCCeeEEEEeccCC
Q 044615 470 IGNGGQGSVYKAK-LPTGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKI---RHRNIVKFYGFCSHALHSFVVYEYLEM 545 (571)
Q Consensus 470 lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l---~H~niv~l~~~~~~~~~~~lv~e~~~~ 545 (571)
||+|+||.||+|+ ..+++.||||++.+...........+..|..++.+. +||||+++++++.+.+..|+||||+++
T Consensus 1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~~~~~lv~e~~~~ 80 (330)
T cd05586 1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTDSDLYLVTDYMSG 80 (330)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEecCCeEEEEEcCCCC
Confidence 6999999999999 457999999998643222222344566777777665 799999999999999999999999999
Q ss_pred CChhhhhccCCCccCCCHHHHhh
Q 044615 546 GSLAMNLSNDAAAEQFCWTKRMN 568 (571)
Q Consensus 546 G~L~~~l~~~~~~~~l~w~~r~~ 568 (571)
|+|.+++.+.+ .+++.....
T Consensus 81 g~L~~~l~~~~---~~~~~~~~~ 100 (330)
T cd05586 81 GELFWHLQKEG---RFSEDRAKF 100 (330)
T ss_pred ChHHHHHHhcC---CCCHHHHHH
Confidence 99999987543 345444433
No 318
>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the
Probab=99.05 E-value=5.7e-10 Score=110.27 Aligned_cols=105 Identities=28% Similarity=0.371 Sum_probs=85.0
Q ss_pred cCCCccCeeeccCcceEEEEEc-CCCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhcCCCCcccEEEEEEeC--CeeEE
Q 044615 462 NNFDDGHCIGNGGQGSVYKAKL-PTGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKIRHRNIVKFYGFCSHA--LHSFV 538 (571)
Q Consensus 462 ~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~--~~~~l 538 (571)
++|+..+.||+|+||.||+|.. .+++.+|+|.++...... .....+.+|+.++++++||||+++++++... ...|+
T Consensus 5 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~-~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~l 83 (293)
T cd07843 5 DEYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEKE-GFPITSLREINILLKLQHPNIVTVKEVVVGSNLDKIYM 83 (293)
T ss_pred hhhhhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeeccccc-cchhhHHHHHHHHHhcCCCCEEEEEEEEEecCCCcEEE
Confidence 4688899999999999999995 478999999997543221 2234577899999999999999999999887 88999
Q ss_pred EEeccCCCChhhhhccCCCccCCCHHHHhhhc
Q 044615 539 VYEYLEMGSLAMNLSNDAAAEQFCWTKRMNAI 570 (571)
Q Consensus 539 v~e~~~~G~L~~~l~~~~~~~~l~w~~r~~ia 570 (571)
||||++ ++|.+++..... .+++.....|+
T Consensus 84 v~e~~~-~~L~~~~~~~~~--~l~~~~~~~i~ 112 (293)
T cd07843 84 VMEYVE-HDLKSLMETMKQ--PFLQSEVKCLM 112 (293)
T ss_pred EehhcC-cCHHHHHHhccC--CCCHHHHHHHH
Confidence 999998 599998875432 57777776654
No 319
>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They
Probab=99.05 E-value=1.4e-09 Score=105.05 Aligned_cols=107 Identities=23% Similarity=0.368 Sum_probs=88.9
Q ss_pred CCCccCeeeccCcceEEEEE-cCCCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhcCCCCcccEEEEEEeCCeeEEEEe
Q 044615 463 NFDDGHCIGNGGQGSVYKAK-LPTGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKIRHRNIVKFYGFCSHALHSFVVYE 541 (571)
Q Consensus 463 ~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~e 541 (571)
+|...+.||+|+||.||++. ..++..||+|++...... ....+.+.+|++++++++|||++++++.+......++|+|
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~lv~e 79 (258)
T cd08215 1 KYEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMS-EKEREDALNEVKILKKLNHPNIIKYYESFEEKGKLCIVME 79 (258)
T ss_pred CceEEeeeccCCCeEEEEEEEcCCCcEEEEEEeecccCC-hHHHHHHHHHHHHHHhcCCCChhheEEEEecCCEEEEEEE
Confidence 47788899999999999999 457899999999764432 2345678999999999999999999999999999999999
Q ss_pred ccCCCChhhhhccCC-CccCCCHHHHhhhc
Q 044615 542 YLEMGSLAMNLSNDA-AAEQFCWTKRMNAI 570 (571)
Q Consensus 542 ~~~~G~L~~~l~~~~-~~~~l~w~~r~~ia 570 (571)
|+++++|.+++.+.. ....+++.+...|+
T Consensus 80 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~ 109 (258)
T cd08215 80 YADGGDLSQKIKKQKKEGKPFPEEQILDWF 109 (258)
T ss_pred ecCCCcHHHHHHHhhccCCCcCHHHHHHHH
Confidence 999999999997642 13467777776664
No 320
>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6. Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs
Probab=99.05 E-value=9.6e-10 Score=107.99 Aligned_cols=106 Identities=19% Similarity=0.271 Sum_probs=81.8
Q ss_pred cCCCccCeeeccCcceEEEEE-cCCCCEEEEEEccCCCCCchHhHHHHHHHHHH-HhhcCCCCcccEEEEEEeCCeeEEE
Q 044615 462 NNFDDGHCIGNGGQGSVYKAK-LPTGEIVDVKKFHSPLPDEMACQQEFLNEVNA-LTKIRHRNIVKFYGFCSHALHSFVV 539 (571)
Q Consensus 462 ~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~-l~~l~H~niv~l~~~~~~~~~~~lv 539 (571)
++|++.+.||+|+||.||+|. ..+|+.||+|++....... ...++..|+.. ++..+||||+++++++...+..|+|
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~--~~~~~~~e~~~~~~~~~~~~iv~~~~~~~~~~~~~lv 78 (283)
T cd06617 1 DDLEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQ--EQKRLLMDLDISMRSVDCPYTVTFYGALFREGDVWIC 78 (283)
T ss_pred CCceEEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCcH--HHHHHHHHHHHHHHHcCCCCeeeeeEEEecCCcEEEE
Confidence 368889999999999999999 4579999999987643222 23456667665 6677999999999999999999999
Q ss_pred EeccCCCChhhhhccC-CCccCCCHHHHhhhc
Q 044615 540 YEYLEMGSLAMNLSND-AAAEQFCWTKRMNAI 570 (571)
Q Consensus 540 ~e~~~~G~L~~~l~~~-~~~~~l~w~~r~~ia 570 (571)
|||++ |+|.+++... .....++|....+++
T Consensus 79 ~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~ 109 (283)
T cd06617 79 MEVMD-TSLDKFYKKVYDKGLTIPEDILGKIA 109 (283)
T ss_pred hhhhc-ccHHHHHHHhccCCCCCCHHHHHHHH
Confidence 99997 6888887642 222457777665554
No 321
>PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A.
Probab=99.04 E-value=2.7e-10 Score=101.12 Aligned_cols=82 Identities=32% Similarity=0.406 Sum_probs=15.4
Q ss_pred CCCCCEEecccCcCccccccccc-CCCCCCEEEcccCcCcccccccccCCCCCCeeecccCcCcccCCccc-cCCCCCCE
Q 044615 96 MKSLSDLQLSENILNGSIPLALG-NLTNLVVLDLSTNKLSGSIPLSFANLTSLSILYLYENSLCDSIPKEI-GNMNSLSI 173 (571)
Q Consensus 96 l~~L~~L~L~~n~i~~~~~~~~~-~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l-~~l~~L~~ 173 (571)
...+++|+|++|.|+.+ +.++ .+.+|+.|+|++|.|+.. ..+..++.|++|++++|.++.. ++.+ ..+++|++
T Consensus 18 ~~~~~~L~L~~n~I~~I--e~L~~~l~~L~~L~Ls~N~I~~l--~~l~~L~~L~~L~L~~N~I~~i-~~~l~~~lp~L~~ 92 (175)
T PF14580_consen 18 PVKLRELNLRGNQISTI--ENLGATLDKLEVLDLSNNQITKL--EGLPGLPRLKTLDLSNNRISSI-SEGLDKNLPNLQE 92 (175)
T ss_dssp --------------------S--TT-TT--EEE-TTS--S----TT----TT--EEE--SS---S--CHHHHHH-TT--E
T ss_pred ccccccccccccccccc--cchhhhhcCCCEEECCCCCCccc--cCccChhhhhhcccCCCCCCcc-ccchHHhCCcCCE
Confidence 33455556655555522 2233 345555555555555432 1244445555555555555432 2222 23444445
Q ss_pred EEccCCCCC
Q 044615 174 LDLSSNKLN 182 (571)
Q Consensus 174 L~L~~n~l~ 182 (571)
|++++|++.
T Consensus 93 L~L~~N~I~ 101 (175)
T PF14580_consen 93 LYLSNNKIS 101 (175)
T ss_dssp EE-TTS---
T ss_pred EECcCCcCC
Confidence 554444443
No 322
>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.04 E-value=6.6e-11 Score=110.39 Aligned_cols=95 Identities=22% Similarity=0.246 Sum_probs=83.3
Q ss_pred ccCCCccCeeeccCcceEEEEE-cCCCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhcCCCCcccEEEEEEeCCeeEEE
Q 044615 461 TNNFDDGHCIGNGGQGSVYKAK-LPTGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKIRHRNIVKFYGFCSHALHSFVV 539 (571)
Q Consensus 461 ~~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv 539 (571)
.++|+..+++|+|.||+|..++ ..+++.+|+|++++...-.......-..|-+++...+||.+..+...|++++.+|.|
T Consensus 167 m~dFdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPFLt~LKYsFQt~drlCFV 246 (516)
T KOG0690|consen 167 MEDFDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPFLTSLKYSFQTQDRLCFV 246 (516)
T ss_pred cchhhHHHHhcCCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhccCcHHHHhhhhhccCceEEEE
Confidence 4578889999999999999998 668999999999876544434456677899999999999999999999999999999
Q ss_pred EeccCCCChhhhhccC
Q 044615 540 YEYLEMGSLAMNLSND 555 (571)
Q Consensus 540 ~e~~~~G~L~~~l~~~ 555 (571)
|||+.||+|+-+|.+.
T Consensus 247 MeyanGGeLf~HLsre 262 (516)
T KOG0690|consen 247 MEYANGGELFFHLSRE 262 (516)
T ss_pred EEEccCceEeeehhhh
Confidence 9999999999988753
No 323
>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning
Probab=99.04 E-value=6.4e-10 Score=109.51 Aligned_cols=103 Identities=27% Similarity=0.379 Sum_probs=82.4
Q ss_pred CCCccCeeeccCcceEEEEEc-CCCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhcCCCCcccEEEEEEeCCeeEEEEe
Q 044615 463 NFDDGHCIGNGGQGSVYKAKL-PTGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKIRHRNIVKFYGFCSHALHSFVVYE 541 (571)
Q Consensus 463 ~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~e 541 (571)
+|+..+.||+|+||.||+|.. .+++.||+|.++..... ....+.+.+|++++++++||||+++++++.+.+..|+|||
T Consensus 2 ~y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e 80 (288)
T cd07833 2 KYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDD-EDVKKTALREVKVLRQLRHENIVNLKEAFRRKGRLYLVFE 80 (288)
T ss_pred ceeEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhccc-ccchhHHHHHHHHHHhcCCCCeeehhheEEECCEEEEEEe
Confidence 588899999999999999994 47889999998754322 2335678999999999999999999999999999999999
Q ss_pred ccCCCChhhhhccCCCccCCCHHHHhhh
Q 044615 542 YLEMGSLAMNLSNDAAAEQFCWTKRMNA 569 (571)
Q Consensus 542 ~~~~G~L~~~l~~~~~~~~l~w~~r~~i 569 (571)
|++++.+..+..... .+++.....+
T Consensus 81 ~~~~~~l~~~~~~~~---~~~~~~~~~~ 105 (288)
T cd07833 81 YVERTLLELLEASPG---GLPPDAVRSY 105 (288)
T ss_pred cCCCCHHHHHHhcCC---CCCHHHHHHH
Confidence 999877776654322 3555554443
No 324
>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=99.04 E-value=1.1e-09 Score=105.91 Aligned_cols=102 Identities=25% Similarity=0.345 Sum_probs=82.6
Q ss_pred cCCCccCeeeccCcceEEEEEcCCCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhcCCCCcccEEEEEE-eCCeeEEEE
Q 044615 462 NNFDDGHCIGNGGQGSVYKAKLPTGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKIRHRNIVKFYGFCS-HALHSFVVY 540 (571)
Q Consensus 462 ~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~-~~~~~~lv~ 540 (571)
.+|++.+.||+|+||.||++.. .|..||+|.+.... ..+.|.+|+.++++++|||++++++++. ..+..|+||
T Consensus 6 ~~~~~~~~lg~g~~~~v~~~~~-~~~~~~~k~~~~~~-----~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~ 79 (256)
T cd05082 6 KELKLLQTIGKGEFGDVMLGDY-RGNKVAVKCIKNDA-----TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVT 79 (256)
T ss_pred HhCeeeeeecccCCCeEEEEEE-cCCcEEEEEeCCCc-----hHHHHHHHHHHHHhCCCCCeeeEEEEEEcCCCceEEEE
Confidence 3588889999999999999976 47789999986432 2457899999999999999999999764 456789999
Q ss_pred eccCCCChhhhhccCCCccCCCHHHHhhhc
Q 044615 541 EYLEMGSLAMNLSNDAAAEQFCWTKRMNAI 570 (571)
Q Consensus 541 e~~~~G~L~~~l~~~~~~~~l~w~~r~~ia 570 (571)
||+++|+|.++++.... ..++|...++++
T Consensus 80 e~~~~~~L~~~~~~~~~-~~~~~~~~~~~~ 108 (256)
T cd05082 80 EYMAKGSLVDYLRSRGR-SVLGGDCLLKFS 108 (256)
T ss_pred ECCCCCcHHHHHHhcCC-CCCCHHHHHHHH
Confidence 99999999999975432 346777776654
No 325
>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]
Probab=99.04 E-value=3.7e-10 Score=114.04 Aligned_cols=90 Identities=28% Similarity=0.469 Sum_probs=73.1
Q ss_pred CccCeeeccCcceEEEEEcC---CCC--EEEEEEccCCCCCchHhHHHHHHHHHHHhhcCCCCcccEEEEEEeCCeeEEE
Q 044615 465 DDGHCIGNGGQGSVYKAKLP---TGE--IVDVKKFHSPLPDEMACQQEFLNEVNALTKIRHRNIVKFYGFCSHALHSFVV 539 (571)
Q Consensus 465 ~~~~~lg~G~~g~V~~~~~~---~~~--~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv 539 (571)
...+.||.|.||.||+|.+. .|+ .||||.-+.+... ...+.|.+|..+|+.++|||||+++|+|.+. ..|||
T Consensus 392 tl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t~--d~tekflqEa~iMrnfdHphIikLIGv~~e~-P~Wiv 468 (974)
T KOG4257|consen 392 TLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCTP--DDTEKFLQEASIMRNFDHPHIIKLIGVCVEQ-PMWIV 468 (974)
T ss_pred cHHHhhcCCcccceeeeEecccccCcceeeeeehhccCCCh--hhHHHHHHHHHHHHhCCCcchhheeeeeecc-ceeEE
Confidence 44578999999999999832 333 4788887654332 3368899999999999999999999999654 57899
Q ss_pred EeccCCCChhhhhccCCC
Q 044615 540 YEYLEMGSLAMNLSNDAA 557 (571)
Q Consensus 540 ~e~~~~G~L~~~l~~~~~ 557 (571)
||.++-|.|..||+....
T Consensus 469 mEL~~~GELr~yLq~nk~ 486 (974)
T KOG4257|consen 469 MELAPLGELREYLQQNKD 486 (974)
T ss_pred EecccchhHHHHHHhccc
Confidence 999999999999986543
No 326
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=99.04 E-value=7e-10 Score=108.93 Aligned_cols=110 Identities=25% Similarity=0.352 Sum_probs=85.4
Q ss_pred cHHHHHHHccCCCccCeeeccCcceEEEEE-cCCCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhc-CCCCcccEEEEE
Q 044615 453 VHEEIIRATNNFDDGHCIGNGGQGSVYKAK-LPTGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKI-RHRNIVKFYGFC 530 (571)
Q Consensus 453 ~~~~~~~~~~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l-~H~niv~l~~~~ 530 (571)
+..++..+.+.|++.+.+|+|+||.||+|. ..+++.+|+|.+.... ....++..|+.++.++ +||||+++++++
T Consensus 7 ~~~~~~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~~----~~~~~~~~e~~~l~~~~~h~~i~~~~~~~ 82 (282)
T cd06636 7 DLSALRDPAGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTE----DEEEEIKLEINMLKKYSHHRNIATYYGAF 82 (282)
T ss_pred hhhhhcChhhhhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecCh----HHHHHHHHHHHHHHHhcCCCcEEEEeeeh
Confidence 344555566789999999999999999999 4578999999986432 2245688999999998 799999999998
Q ss_pred Ee------CCeeEEEEeccCCCChhhhhccCCCccCCCHHHHh
Q 044615 531 SH------ALHSFVVYEYLEMGSLAMNLSNDAAAEQFCWTKRM 567 (571)
Q Consensus 531 ~~------~~~~~lv~e~~~~G~L~~~l~~~~~~~~l~w~~r~ 567 (571)
.. ....|++|||+++|+|.+++..... ..+++....
T Consensus 83 ~~~~~~~~~~~~~iv~e~~~~~~L~~~~~~~~~-~~~~~~~~~ 124 (282)
T cd06636 83 IKKSPPGHDDQLWLVMEFCGAGSVTDLVKNTKG-NALKEDWIA 124 (282)
T ss_pred hcccccCCCCEEEEEEEeCCCCcHHHHHHHccC-CCCCHHHHH
Confidence 53 4578999999999999999975322 234554443
No 327
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=99.04 E-value=5.9e-10 Score=110.39 Aligned_cols=100 Identities=23% Similarity=0.305 Sum_probs=81.3
Q ss_pred CCccCeeeccCcceEEEEE-cCCCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhcCCCCcccEEEEEEeCCeeEEEEec
Q 044615 464 FDDGHCIGNGGQGSVYKAK-LPTGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKIRHRNIVKFYGFCSHALHSFVVYEY 542 (571)
Q Consensus 464 ~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 542 (571)
|+....||+|+||.||+|. ..+++.||+|.+..... ...+.+.+|+.++..++|||++++++++..++..|+||||
T Consensus 23 ~~~~~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~---~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~iv~e~ 99 (297)
T cd06659 23 LENYIKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQ---QRRELLFNEVVIMRDYQHQNVVEMYKSYLVGEELWVLMEF 99 (297)
T ss_pred HHhhhhcCCCCceeEEEEEEcCCCCEEEEEEEEeccc---chHHHHHHHHHHHHhCCCCchhhhhhheeeCCeEEEEEec
Confidence 4445679999999999998 45789999999865432 2246788999999999999999999999999999999999
Q ss_pred cCCCChhhhhccCCCccCCCHHHHhhhc
Q 044615 543 LEMGSLAMNLSNDAAAEQFCWTKRMNAI 570 (571)
Q Consensus 543 ~~~G~L~~~l~~~~~~~~l~w~~r~~ia 570 (571)
+++|+|.+++... .++|.....++
T Consensus 100 ~~~~~L~~~~~~~----~~~~~~~~~~~ 123 (297)
T cd06659 100 LQGGALTDIVSQT----RLNEEQIATVC 123 (297)
T ss_pred CCCCCHHHHHhhc----CCCHHHHHHHH
Confidence 9999999987642 35666655543
No 328
>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases. Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core
Probab=99.04 E-value=1.8e-09 Score=103.81 Aligned_cols=103 Identities=30% Similarity=0.413 Sum_probs=87.2
Q ss_pred CCCccCeeeccCcceEEEEEc-CCCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhcCCCCcccEEEEEEeCCeeEEEEe
Q 044615 463 NFDDGHCIGNGGQGSVYKAKL-PTGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKIRHRNIVKFYGFCSHALHSFVVYE 541 (571)
Q Consensus 463 ~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~e 541 (571)
+|+..+.||+|++|.||++.. .++..+|+|++..... ...+.+.+|++.+++++|||++++++++......++++|
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~---~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l~~e 77 (253)
T cd05122 1 LFEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESK---EKKEKIINEIQILKKCKHPNIVKYYGSYLKKDELWIVME 77 (253)
T ss_pred CceeeeeeccCCceEEEEEEECCCCcEEEEEEecccch---hHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEe
Confidence 477889999999999999995 4789999999976543 235789999999999999999999999999999999999
Q ss_pred ccCCCChhhhhccCCCccCCCHHHHhhhc
Q 044615 542 YLEMGSLAMNLSNDAAAEQFCWTKRMNAI 570 (571)
Q Consensus 542 ~~~~G~L~~~l~~~~~~~~l~w~~r~~ia 570 (571)
|+++++|.+++.... ..++|.....|+
T Consensus 78 ~~~~~~L~~~~~~~~--~~~~~~~~~~i~ 104 (253)
T cd05122 78 FCSGGSLKDLLKSTN--QTLTESQIAYVC 104 (253)
T ss_pred cCCCCcHHHHHhhcC--CCCCHHHHHHHH
Confidence 999999999987543 356777766554
No 329
>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl. Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor
Probab=99.04 E-value=1.4e-09 Score=106.07 Aligned_cols=105 Identities=20% Similarity=0.350 Sum_probs=79.3
Q ss_pred CccCeeeccCcceEEEEEcC-CCC--EEEEEEccCCCCCchHhHHHHHHHHHHHhhcCCCCcccEEEEEEeC------Ce
Q 044615 465 DDGHCIGNGGQGSVYKAKLP-TGE--IVDVKKFHSPLPDEMACQQEFLNEVNALTKIRHRNIVKFYGFCSHA------LH 535 (571)
Q Consensus 465 ~~~~~lg~G~~g~V~~~~~~-~~~--~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~------~~ 535 (571)
.+.+.||+|+||.||+|... .+. .+|+|.++.... .....+.|.+|+++++.++||||+++++++... ..
T Consensus 2 ~i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 80 (272)
T cd05075 2 ALGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAIC-TRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVESEGYPS 80 (272)
T ss_pred ccccccCcccCceEEEeEEccCCCeeeEEEEecccCcC-CHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCcccCCCC
Confidence 45688999999999999854 343 589999875432 234467899999999999999999999987532 24
Q ss_pred eEEEEeccCCCChhhhhccCC---CccCCCHHHHhhhc
Q 044615 536 SFVVYEYLEMGSLAMNLSNDA---AAEQFCWTKRMNAI 570 (571)
Q Consensus 536 ~~lv~e~~~~G~L~~~l~~~~---~~~~l~w~~r~~ia 570 (571)
.+++|||+++|+|.+++.... ....++|.....++
T Consensus 81 ~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 118 (272)
T cd05075 81 PVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFM 118 (272)
T ss_pred cEEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHH
Confidence 689999999999999885321 22347777665543
No 330
>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an
Probab=99.03 E-value=5.1e-10 Score=108.07 Aligned_cols=107 Identities=21% Similarity=0.309 Sum_probs=87.6
Q ss_pred CCCccCeeeccCcceEEEEE-cCCCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhcCCCCcccEEEEEEeCCeeEEEEe
Q 044615 463 NFDDGHCIGNGGQGSVYKAK-LPTGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKIRHRNIVKFYGFCSHALHSFVVYE 541 (571)
Q Consensus 463 ~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~e 541 (571)
+|++.+.||+|+||.||++. ..+++.+|+|.+...... .....++.+|++++++++||||+++++++.+....|+|||
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e 79 (256)
T cd08530 1 DFKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMS-QKEREDAVNEIRILASVNHPNIISYKEAFLDGNKLCIVME 79 (256)
T ss_pred CceEeeeecCCCceeEEEEEECCCCCEEEEEEEehhhcc-HHHHHHHHHHHHHHHhCCCCCchhhhhhhccCCEEEEEeh
Confidence 47788999999999999998 557899999998754432 2345678899999999999999999999999999999999
Q ss_pred ccCCCChhhhhccCC-CccCCCHHHHhhhc
Q 044615 542 YLEMGSLAMNLSNDA-AAEQFCWTKRMNAI 570 (571)
Q Consensus 542 ~~~~G~L~~~l~~~~-~~~~l~w~~r~~ia 570 (571)
|+++++|.+++.+.. ....++|.....++
T Consensus 80 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~ 109 (256)
T cd08530 80 YAPFGDLSKAISKRKKKRKLIPEQEIWRIF 109 (256)
T ss_pred hcCCCCHHHHHHHHHhhcCCCCHHHHHHHH
Confidence 999999999987532 12457777665543
No 331
>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]
Probab=99.03 E-value=6.9e-10 Score=116.59 Aligned_cols=105 Identities=27% Similarity=0.404 Sum_probs=85.1
Q ss_pred HHHHHHccCCCccCeeeccCcceEEEEE-cCCCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhc-CCCCcccEEEEEEe
Q 044615 455 EEIIRATNNFDDGHCIGNGGQGSVYKAK-LPTGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKI-RHRNIVKFYGFCSH 532 (571)
Q Consensus 455 ~~~~~~~~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l-~H~niv~l~~~~~~ 532 (571)
+.+...++.|++..+||.|.+|.||+++ .++++.+|||+.......+ ++...|..+++.. +|||++.++|+|..
T Consensus 12 ~~lpdp~d~~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~d~d----eEiE~eynil~~~~~hpnv~~fyg~~~k 87 (953)
T KOG0587|consen 12 SSLPDPADIFEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTEDEE----EEIELEYNMLKKYSHHPNVATFYGAFIK 87 (953)
T ss_pred hhCCCCCCccEEEEEEeeccceeEEEEeeeecCceeeeEeecCCcccc----HHHHHHHHHHHhccCCCCcceEEEEEEE
Confidence 3344456678999999999999999999 6789999999998765443 5677788887765 89999999999964
Q ss_pred -----CCeeEEEEeccCCCChhhhhccCCCccCCCHH
Q 044615 533 -----ALHSFVVYEYLEMGSLAMNLSNDAAAEQFCWT 564 (571)
Q Consensus 533 -----~~~~~lv~e~~~~G~L~~~l~~~~~~~~l~w~ 564 (571)
++++|+|||||.+|+.-|++++-. +..++|.
T Consensus 88 ~~~~~~DqLWLVMEfC~gGSVTDLVKn~~-g~rl~E~ 123 (953)
T KOG0587|consen 88 KDPGNGDQLWLVMEFCGGGSVTDLVKNTK-GNRLKEE 123 (953)
T ss_pred ecCCCCCeEEEEeeccCCccHHHHHhhhc-ccchhhH
Confidence 578999999999999999998643 3456665
No 332
>PRK09188 serine/threonine protein kinase; Provisional
Probab=99.03 E-value=1e-09 Score=109.65 Aligned_cols=89 Identities=16% Similarity=0.128 Sum_probs=68.7
Q ss_pred HHccCCCccCeeeccCcceEEEEEc-C-CCCEEEEEEccCCCC--CchHhHHHHHHHHHHHhhcCCCCcccEEEEEEeCC
Q 044615 459 RATNNFDDGHCIGNGGQGSVYKAKL-P-TGEIVDVKKFHSPLP--DEMACQQEFLNEVNALTKIRHRNIVKFYGFCSHAL 534 (571)
Q Consensus 459 ~~~~~~~~~~~lg~G~~g~V~~~~~-~-~~~~vavK~~~~~~~--~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~ 534 (571)
...++|...+.||+|+||+||+|.. . +++.||||++..... ......+.|.+|++++++++|+|+|+.+.. .+
T Consensus 15 ~~~~~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~~---~~ 91 (365)
T PRK09188 15 ALSARFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLLA---TG 91 (365)
T ss_pred cccCCceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEEE---cC
Confidence 3456799999999999999999984 3 677889998753311 122335679999999999999999963332 24
Q ss_pred eeEEEEeccCCCChhh
Q 044615 535 HSFVVYEYLEMGSLAM 550 (571)
Q Consensus 535 ~~~lv~e~~~~G~L~~ 550 (571)
..|+||||++|++|..
T Consensus 92 ~~~LVmE~~~G~~L~~ 107 (365)
T PRK09188 92 KDGLVRGWTEGVPLHL 107 (365)
T ss_pred CcEEEEEccCCCCHHH
Confidence 5799999999999973
No 333
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=99.03 E-value=1.6e-09 Score=106.87 Aligned_cols=105 Identities=21% Similarity=0.358 Sum_probs=78.1
Q ss_pred CCCccCeeeccCcceEEEEEc-C-CCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhc---CCCCcccEEEEEEe-----
Q 044615 463 NFDDGHCIGNGGQGSVYKAKL-P-TGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKI---RHRNIVKFYGFCSH----- 532 (571)
Q Consensus 463 ~~~~~~~lg~G~~g~V~~~~~-~-~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l---~H~niv~l~~~~~~----- 532 (571)
.|++.+.||+|+||.||+|+. . +++.||+|.+....... .....+.+|+.+++.+ +||||++++++|..
T Consensus 2 ~Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~-~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~~ 80 (290)
T cd07862 2 QYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEE-GMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDR 80 (290)
T ss_pred CcceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCC-CchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCCC
Confidence 588899999999999999984 3 46889999987543222 2234566787776655 79999999999853
Q ss_pred CCeeEEEEeccCCCChhhhhccCCCccCCCHHHHhhhc
Q 044615 533 ALHSFVVYEYLEMGSLAMNLSNDAAAEQFCWTKRMNAI 570 (571)
Q Consensus 533 ~~~~~lv~e~~~~G~L~~~l~~~~~~~~l~w~~r~~ia 570 (571)
....++||||++ |+|.+++..... ..++|.....|+
T Consensus 81 ~~~~~lv~e~~~-~~l~~~~~~~~~-~~~~~~~~~~i~ 116 (290)
T cd07862 81 ETKLTLVFEHVD-QDLTTYLDKVPE-PGVPTETIKDMM 116 (290)
T ss_pred CCcEEEEEccCC-CCHHHHHHhCCC-CCCCHHHHHHHH
Confidence 356899999997 699999875332 346777666554
No 334
>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=99.03 E-value=1.1e-09 Score=107.99 Aligned_cols=93 Identities=18% Similarity=0.280 Sum_probs=77.8
Q ss_pred CCCccCeeeccCcceEEEEEc----CCCCEEEEEEccCCCCCc-hHhHHHHHHHHHHHhhc-CCCCcccEEEEEEeCCee
Q 044615 463 NFDDGHCIGNGGQGSVYKAKL----PTGEIVDVKKFHSPLPDE-MACQQEFLNEVNALTKI-RHRNIVKFYGFCSHALHS 536 (571)
Q Consensus 463 ~~~~~~~lg~G~~g~V~~~~~----~~~~~vavK~~~~~~~~~-~~~~~~~~~Ei~~l~~l-~H~niv~l~~~~~~~~~~ 536 (571)
+|++.+.||+|+||.||.|.. .+|..||+|.+....... ....+++.+|++++.++ +||||+++++++......
T Consensus 1 ~y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~ 80 (290)
T cd05613 1 NFELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTDTKL 80 (290)
T ss_pred CceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEeecCCeE
Confidence 477889999999999999984 378999999987533211 12346788999999999 699999999999999999
Q ss_pred EEEEeccCCCChhhhhccC
Q 044615 537 FVVYEYLEMGSLAMNLSND 555 (571)
Q Consensus 537 ~lv~e~~~~G~L~~~l~~~ 555 (571)
|+||||+++|+|.+++...
T Consensus 81 ~lv~e~~~~~~L~~~l~~~ 99 (290)
T cd05613 81 HLILDYINGGELFTHLSQR 99 (290)
T ss_pred EEEEecCCCCcHHHHHHHc
Confidence 9999999999999999754
No 335
>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2. Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve
Probab=99.02 E-value=1.6e-09 Score=106.13 Aligned_cols=104 Identities=19% Similarity=0.358 Sum_probs=82.5
Q ss_pred cCCCccCeeeccCcceEEEEE-cCCCC----EEEEEEccCCCCCchHhHHHHHHHHHHHhhcCCCCcccEEEEEEeCCee
Q 044615 462 NNFDDGHCIGNGGQGSVYKAK-LPTGE----IVDVKKFHSPLPDEMACQQEFLNEVNALTKIRHRNIVKFYGFCSHALHS 536 (571)
Q Consensus 462 ~~~~~~~~lg~G~~g~V~~~~-~~~~~----~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~ 536 (571)
.+|+..+.||+|+||.||+|. ..++. .||+|.+..... ....+++.+|+.+++.++||||+++++++.. ...
T Consensus 7 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~~--~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~-~~~ 83 (279)
T cd05109 7 TELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTS--PKANKEILDEAYVMAGVGSPYVCRLLGICLT-STV 83 (279)
T ss_pred hheeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCCC--HHHHHHHHHHHHHHHhcCCCCCceEEEEEcC-CCc
Confidence 468888999999999999998 44554 489999865432 2335678999999999999999999999975 457
Q ss_pred EEEEeccCCCChhhhhccCCCccCCCHHHHhhhc
Q 044615 537 FVVYEYLEMGSLAMNLSNDAAAEQFCWTKRMNAI 570 (571)
Q Consensus 537 ~lv~e~~~~G~L~~~l~~~~~~~~l~w~~r~~ia 570 (571)
+++|||+++|+|.++++.... .+++...+.++
T Consensus 84 ~l~~~~~~~g~l~~~l~~~~~--~~~~~~~~~~~ 115 (279)
T cd05109 84 QLVTQLMPYGCLLDYVRENKD--RIGSQDLLNWC 115 (279)
T ss_pred EEEEEcCCCCCHHHHHhhccC--CCCHHHHHHHH
Confidence 899999999999999975432 46776666654
No 336
>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely
Probab=99.01 E-value=1.2e-09 Score=108.37 Aligned_cols=107 Identities=28% Similarity=0.406 Sum_probs=83.8
Q ss_pred HccCCCccCeeeccCcceEEEEEc-CCCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhcCCCCcccEEEEEEeCC----
Q 044615 460 ATNNFDDGHCIGNGGQGSVYKAKL-PTGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKIRHRNIVKFYGFCSHAL---- 534 (571)
Q Consensus 460 ~~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~---- 534 (571)
..++|++.+.+|+|+||.||+|.. .+++.||+|.+....... .....+.+|++++++++||||+++++++.+..
T Consensus 5 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~-~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~~~~~ 83 (302)
T cd07864 5 CVDKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKE-GFPITAIREIKILRQLNHRNIVNLKEIVTDKQDALD 83 (302)
T ss_pred hhhhhheeeeecccCCEEEEEEEECCCCcEEEEEEEeeccccc-CchHHHHHHHHHHHhCCCCCeeeeeheecCcchhhh
Confidence 456799999999999999999995 478999999997543221 22356789999999999999999999987654
Q ss_pred ------eeEEEEeccCCCChhhhhccCCCccCCCHHHHhhhc
Q 044615 535 ------HSFVVYEYLEMGSLAMNLSNDAAAEQFCWTKRMNAI 570 (571)
Q Consensus 535 ------~~~lv~e~~~~G~L~~~l~~~~~~~~l~w~~r~~ia 570 (571)
..|+|+||+++ ++.+.+.... ..++|.....|+
T Consensus 84 ~~~~~~~~~lv~e~~~~-~l~~~l~~~~--~~~~~~~~~~i~ 122 (302)
T cd07864 84 FKKDKGAFYLVFEYMDH-DLMGLLESGL--VHFSEDHIKSFM 122 (302)
T ss_pred ccccCCcEEEEEcccCc-cHHHHHhcCC--CCCCHHHHHHHH
Confidence 78999999986 7777776432 246777766554
No 337
>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta. Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig
Probab=99.01 E-value=1.6e-09 Score=108.95 Aligned_cols=99 Identities=26% Similarity=0.265 Sum_probs=79.1
Q ss_pred eeecc--CcceEEEEE-cCCCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhcCCCCcccEEEEEEeCCeeEEEEeccCC
Q 044615 469 CIGNG--GQGSVYKAK-LPTGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKIRHRNIVKFYGFCSHALHSFVVYEYLEM 545 (571)
Q Consensus 469 ~lg~G--~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~ 545 (571)
.||+| +||+||+++ ..+|+.||+|++....... ...+.+.+|+.+++.++||||++++++|..++..++||||+++
T Consensus 5 ~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~~-~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~~~~~v~e~~~~ 83 (328)
T cd08226 5 EIGRGFCNLTSVYLARHTPTGTLVTVRITDLENCTE-EHLKALQNEVVLSHFFRHPNIMTSWTVFTTGSWLWVISPFMAY 83 (328)
T ss_pred HhCCcccCceeEEEEEEcCCCcEEEEEEeccccCCH-HHHHHHHHHHHHHHhCCCCCcceEeeeEecCCceEEEEecccC
Confidence 45655 999999999 4589999999987543332 3457889999999999999999999999999999999999999
Q ss_pred CChhhhhccCCCccCCCHHHHhhh
Q 044615 546 GSLAMNLSNDAAAEQFCWTKRMNA 569 (571)
Q Consensus 546 G~L~~~l~~~~~~~~l~w~~r~~i 569 (571)
|++.+++.+... ..+++.....+
T Consensus 84 ~~l~~~l~~~~~-~~~~~~~~~~~ 106 (328)
T cd08226 84 GSANSLLKTYFP-EGMSEALIGNI 106 (328)
T ss_pred CCHHHHHHhhcc-cCCCHHHHHHH
Confidence 999999875432 23556554443
No 338
>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also
Probab=99.01 E-value=5.5e-10 Score=109.79 Aligned_cols=104 Identities=25% Similarity=0.355 Sum_probs=82.8
Q ss_pred CCCccCeeeccCcceEEEEE-cCCCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhcCCCCcccEEEEEEeCCeeEEEEe
Q 044615 463 NFDDGHCIGNGGQGSVYKAK-LPTGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKIRHRNIVKFYGFCSHALHSFVVYE 541 (571)
Q Consensus 463 ~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~e 541 (571)
.|+..+.||+|+||.||+|. ..+|+.||+|.+...... ......+.+|++++++++||||+++++++.+....|+|+|
T Consensus 1 ~y~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~-~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 79 (284)
T cd07839 1 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDD-EGVPSSALREICLLKELKHKNIVRLYDVLHSDKKLTLVFE 79 (284)
T ss_pred CceeEEEecccCCeEEEEEEECCCCcEEEEEEeeccccc-ccCccchhHHHHHHHhcCCCCeeeHHHHhccCCceEEEEe
Confidence 37788899999999999999 457999999999754322 1223567889999999999999999999999999999999
Q ss_pred ccCCCChhhhhccCCCccCCCHHHHhhhc
Q 044615 542 YLEMGSLAMNLSNDAAAEQFCWTKRMNAI 570 (571)
Q Consensus 542 ~~~~G~L~~~l~~~~~~~~l~w~~r~~ia 570 (571)
|++ |+|.+++..... .+++.....++
T Consensus 80 ~~~-~~l~~~~~~~~~--~~~~~~~~~~~ 105 (284)
T cd07839 80 YCD-QDLKKYFDSCNG--DIDPEIVKSFM 105 (284)
T ss_pred cCC-CCHHHHHHhcCC--CCCHHHHHHHH
Confidence 997 588888764332 46666655543
No 339
>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase. Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm
Probab=99.01 E-value=1.3e-09 Score=107.74 Aligned_cols=107 Identities=22% Similarity=0.354 Sum_probs=83.0
Q ss_pred cCCCccCeeeccCcceEEEEE-cCCCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhcC-CCCcccEEEEEEeCCe----
Q 044615 462 NNFDDGHCIGNGGQGSVYKAK-LPTGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKIR-HRNIVKFYGFCSHALH---- 535 (571)
Q Consensus 462 ~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~-H~niv~l~~~~~~~~~---- 535 (571)
++|+..+.||+|+||.||+|. ..+++.||+|.+....... .....+.+|+.++++++ ||||+++++++...+.
T Consensus 1 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~~-~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~ 79 (295)
T cd07837 1 DAYEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEE-GIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKP 79 (295)
T ss_pred CCceEeeEecccCCeEEEEEEECCCCcEEEEEeehhhcccc-CCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCCc
Confidence 368889999999999999999 4579999999986543221 22456889999999995 6999999999987665
Q ss_pred -eEEEEeccCCCChhhhhccCCC--ccCCCHHHHhhhc
Q 044615 536 -SFVVYEYLEMGSLAMNLSNDAA--AEQFCWTKRMNAI 570 (571)
Q Consensus 536 -~~lv~e~~~~G~L~~~l~~~~~--~~~l~w~~r~~ia 570 (571)
.|+||||+++ +|.+++..... ...++|.....++
T Consensus 80 ~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~ 116 (295)
T cd07837 80 SLYLVFEYLDS-DLKKFMDSNGRGPGRPLPAKTIKSFM 116 (295)
T ss_pred eEEEEeeccCc-CHHHHHHHhcccCCCCCCHHHHHHHH
Confidence 8999999985 89998865322 2356777666553
No 340
>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=99.01 E-value=1.1e-09 Score=107.63 Aligned_cols=90 Identities=21% Similarity=0.283 Sum_probs=76.2
Q ss_pred CCCccCeeeccCcceEEEEEcC------CCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhcCCCCcccEEEEEEeCCee
Q 044615 463 NFDDGHCIGNGGQGSVYKAKLP------TGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKIRHRNIVKFYGFCSHALHS 536 (571)
Q Consensus 463 ~~~~~~~lg~G~~g~V~~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~ 536 (571)
+|...+.||+|+||.||+|... .+..||+|.+..... ....+.|.+|+.+++.++||||+++++++.+.+..
T Consensus 6 ~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~ 83 (283)
T cd05091 6 TVRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAE--GPLREEFKHEAMMRSRLQHPNIVCLLGVVTKEQPL 83 (283)
T ss_pred HHHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCCC--HHHHHHHHHHHHHHhcCCCCCcCeEEEEEcCCCce
Confidence 4667788999999999999842 357899999975432 23356789999999999999999999999999999
Q ss_pred EEEEeccCCCChhhhhcc
Q 044615 537 FVVYEYLEMGSLAMNLSN 554 (571)
Q Consensus 537 ~lv~e~~~~G~L~~~l~~ 554 (571)
++++||+++++|.+++..
T Consensus 84 ~~~~e~~~~~~l~~~l~~ 101 (283)
T cd05091 84 SMIFSYCSHSDLHEFLVM 101 (283)
T ss_pred EEEEEcCCCCcHHHHHHh
Confidence 999999999999999863
No 341
>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi
Probab=99.01 E-value=2e-09 Score=105.60 Aligned_cols=99 Identities=20% Similarity=0.166 Sum_probs=74.9
Q ss_pred eeeccCcceEEEEE-cCCCCEEEEEEccCCCCCchHhHHHHHHHHHH---HhhcCCCCcccEEEEEEeCCeeEEEEeccC
Q 044615 469 CIGNGGQGSVYKAK-LPTGEIVDVKKFHSPLPDEMACQQEFLNEVNA---LTKIRHRNIVKFYGFCSHALHSFVVYEYLE 544 (571)
Q Consensus 469 ~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~---l~~l~H~niv~l~~~~~~~~~~~lv~e~~~ 544 (571)
.||+|+||.||++. ..+++.+|+|.+.+...........+.+|..+ +...+||||+.+++++.+.+..|+||||++
T Consensus 1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~ 80 (279)
T cd05633 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHTPDKLCFILDLMN 80 (279)
T ss_pred CcccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEecCCeEEEEEecCC
Confidence 48999999999999 45789999999876543322222334455433 344589999999999999999999999999
Q ss_pred CCChhhhhccCCCccCCCHHHHhhhc
Q 044615 545 MGSLAMNLSNDAAAEQFCWTKRMNAI 570 (571)
Q Consensus 545 ~G~L~~~l~~~~~~~~l~w~~r~~ia 570 (571)
+|+|.+++...+ .+.|.....|+
T Consensus 81 ~~~L~~~i~~~~---~l~~~~~~~i~ 103 (279)
T cd05633 81 GGDLHYHLSQHG---VFSEKEMRFYA 103 (279)
T ss_pred CCCHHHHHHhcC---CCCHHHHHHHH
Confidence 999999987442 47777666554
No 342
>PLN00009 cyclin-dependent kinase A; Provisional
Probab=99.01 E-value=1.9e-09 Score=106.60 Aligned_cols=92 Identities=26% Similarity=0.460 Sum_probs=77.4
Q ss_pred cCCCccCeeeccCcceEEEEEc-CCCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhcCCCCcccEEEEEEeCCeeEEEE
Q 044615 462 NNFDDGHCIGNGGQGSVYKAKL-PTGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKIRHRNIVKFYGFCSHALHSFVVY 540 (571)
Q Consensus 462 ~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~ 540 (571)
++|+..+.||+|+||.||+|.. .+++.||+|.+...... ....+.+.+|++++++++||||+++++++.+....|+||
T Consensus 2 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 80 (294)
T PLN00009 2 DQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQED-EGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKRLYLVF 80 (294)
T ss_pred CceEEEEEecCCCCEEEEEEEecCCCcEEEEEehhhcccc-ccchHHHHHHHHHHHhccCCCEeeEEEEEecCCeEEEEE
Confidence 4688899999999999999994 57899999998654322 123456889999999999999999999999999999999
Q ss_pred eccCCCChhhhhccC
Q 044615 541 EYLEMGSLAMNLSND 555 (571)
Q Consensus 541 e~~~~G~L~~~l~~~ 555 (571)
||++ +++.+++...
T Consensus 81 e~~~-~~l~~~~~~~ 94 (294)
T PLN00009 81 EYLD-LDLKKHMDSS 94 (294)
T ss_pred eccc-ccHHHHHHhC
Confidence 9996 5888887643
No 343
>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po
Probab=99.01 E-value=1.5e-09 Score=106.72 Aligned_cols=103 Identities=27% Similarity=0.423 Sum_probs=83.6
Q ss_pred CCccCeeeccCcceEEEEEc-CCCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhcCCCCcccEEEEEEeC--CeeEEEE
Q 044615 464 FDDGHCIGNGGQGSVYKAKL-PTGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKIRHRNIVKFYGFCSHA--LHSFVVY 540 (571)
Q Consensus 464 ~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~--~~~~lv~ 540 (571)
|++.+.||+|+||.||+|.. .+++.+|+|.+.... ......+.+.+|++++++++|||++++++++... +..++||
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~-~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~ 79 (287)
T cd07840 1 YEKIAQIGEGTYGQVYKARNKKTGELVALKKIRMEN-EKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSKGKGSIYMVF 79 (287)
T ss_pred CeeeEEeccCCCeEEEEEEECCCCeEEEEEEEeccc-ccccchHHHHHHHHHHHhccCCCeeeheeeEecCCCCcEEEEe
Confidence 56778999999999999994 468899999998653 2223346788999999999999999999999988 8899999
Q ss_pred eccCCCChhhhhccCCCccCCCHHHHhhhc
Q 044615 541 EYLEMGSLAMNLSNDAAAEQFCWTKRMNAI 570 (571)
Q Consensus 541 e~~~~G~L~~~l~~~~~~~~l~w~~r~~ia 570 (571)
||+++ +|.+++.... ..+++.....++
T Consensus 80 e~~~~-~l~~~~~~~~--~~~~~~~~~~i~ 106 (287)
T cd07840 80 EYMDH-DLTGLLDSPE--VKFTESQIKCYM 106 (287)
T ss_pred ccccc-cHHHHHhccC--CCCCHHHHHHHH
Confidence 99985 8998887543 356777766553
No 344
>PHA03211 serine/threonine kinase US3; Provisional
Probab=99.01 E-value=1.4e-09 Score=113.34 Aligned_cols=98 Identities=13% Similarity=0.121 Sum_probs=81.9
Q ss_pred ccCCCccCeeeccCcceEEEEEc-CCCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhcCCCCcccEEEEEEeCCeeEEE
Q 044615 461 TNNFDDGHCIGNGGQGSVYKAKL-PTGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKIRHRNIVKFYGFCSHALHSFVV 539 (571)
Q Consensus 461 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv 539 (571)
...|.+.+.||+|+||.||+|.. .+++.||||... ...+.+|++++++++|||||++++++...+..++|
T Consensus 168 ~~gy~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~---------~~~~~~E~~iL~~L~HpnIv~l~~~~~~~~~~~lv 238 (461)
T PHA03211 168 GLGFAIHRALTPGSEGCVFESSHPDYPQRVVVKAGW---------YASSVHEARLLRRLSHPAVLALLDVRVVGGLTCLV 238 (461)
T ss_pred cCCeEEEEEEccCCCeEEEEEEECCCCCEEEEeccc---------ccCHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEE
Confidence 34688999999999999999994 468899999632 13456899999999999999999999999999999
Q ss_pred EeccCCCChhhhhccCCCccCCCHHHHhhhc
Q 044615 540 YEYLEMGSLAMNLSNDAAAEQFCWTKRMNAI 570 (571)
Q Consensus 540 ~e~~~~G~L~~~l~~~~~~~~l~w~~r~~ia 570 (571)
|||+. |+|.+++..... .++|.++++|+
T Consensus 239 ~e~~~-~~L~~~l~~~~~--~l~~~~~~~i~ 266 (461)
T PHA03211 239 LPKYR-SDLYTYLGARLR--PLGLAQVTAVA 266 (461)
T ss_pred EEccC-CCHHHHHHhcCC--CCCHHHHHHHH
Confidence 99995 799998875332 58888887765
No 345
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=99.00 E-value=6.4e-10 Score=109.86 Aligned_cols=100 Identities=27% Similarity=0.314 Sum_probs=81.4
Q ss_pred CCccCeeeccCcceEEEEE-cCCCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhcCCCCcccEEEEEEeCCeeEEEEec
Q 044615 464 FDDGHCIGNGGQGSVYKAK-LPTGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKIRHRNIVKFYGFCSHALHSFVVYEY 542 (571)
Q Consensus 464 ~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 542 (571)
|.....||+|+||.||++. ..++..||||.+.... ....+.+.+|+.+++.++||||+++++.+..++..|+||||
T Consensus 24 ~~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~lv~e~ 100 (292)
T cd06658 24 LDSFIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRK---QQRRELLFNEVVIMRDYHHENVVDMYNSYLVGDELWVVMEF 100 (292)
T ss_pred HhhhhcccCCCCeEEEEEEECCCCCEEEEEEEecch---HHHHHHHHHHHHHHHhCCCCcHHHHHHheecCCeEEEEEeC
Confidence 3344679999999999998 4578999999986432 23356789999999999999999999999999999999999
Q ss_pred cCCCChhhhhccCCCccCCCHHHHhhhc
Q 044615 543 LEMGSLAMNLSNDAAAEQFCWTKRMNAI 570 (571)
Q Consensus 543 ~~~G~L~~~l~~~~~~~~l~w~~r~~ia 570 (571)
+++|+|.+++... .+++.+...++
T Consensus 101 ~~~~~L~~~~~~~----~l~~~~~~~~~ 124 (292)
T cd06658 101 LEGGALTDIVTHT----RMNEEQIATVC 124 (292)
T ss_pred CCCCcHHHHHhcC----CCCHHHHHHHH
Confidence 9999999988642 35666655543
No 346
>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co
Probab=99.00 E-value=1.9e-09 Score=105.70 Aligned_cols=99 Identities=20% Similarity=0.168 Sum_probs=76.1
Q ss_pred eeeccCcceEEEEE-cCCCCEEEEEEccCCCCCchHhHHHHHHHH---HHHhhcCCCCcccEEEEEEeCCeeEEEEeccC
Q 044615 469 CIGNGGQGSVYKAK-LPTGEIVDVKKFHSPLPDEMACQQEFLNEV---NALTKIRHRNIVKFYGFCSHALHSFVVYEYLE 544 (571)
Q Consensus 469 ~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~Ei---~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~ 544 (571)
.||+|+||.||+|. ..+++.||+|.+.+...........+..|. +.++...||+|+++++++.+.+..|+||||++
T Consensus 1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~ 80 (278)
T cd05606 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMN 80 (278)
T ss_pred CcccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecCCEEEEEEecCC
Confidence 47999999999998 457899999999765433222222344443 34555689999999999999999999999999
Q ss_pred CCChhhhhccCCCccCCCHHHHhhhc
Q 044615 545 MGSLAMNLSNDAAAEQFCWTKRMNAI 570 (571)
Q Consensus 545 ~G~L~~~l~~~~~~~~l~w~~r~~ia 570 (571)
+|+|.+++... ..+.|..+..|+
T Consensus 81 g~~L~~~l~~~---~~l~~~~~~~~~ 103 (278)
T cd05606 81 GGDLHYHLSQH---GVFSEAEMRFYA 103 (278)
T ss_pred CCcHHHHHHhc---CCCCHHHHHHHH
Confidence 99999988643 257888877764
No 347
>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10. Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing
Probab=99.00 E-value=1.7e-09 Score=107.75 Aligned_cols=107 Identities=30% Similarity=0.399 Sum_probs=83.7
Q ss_pred HccCCCccCeeeccCcceEEEEE-cCCCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhcCCCCcccEEEEEEeC--Cee
Q 044615 460 ATNNFDDGHCIGNGGQGSVYKAK-LPTGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKIRHRNIVKFYGFCSHA--LHS 536 (571)
Q Consensus 460 ~~~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~--~~~ 536 (571)
..++|++.+.||+|+||.||+|. ..+|+.||+|.+....... .....+.+|+.++++++||||+++++++... +..
T Consensus 5 ~~~~y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 83 (309)
T cd07845 5 SVTEFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERD-GIPISSLREITLLLNLRHPNIVELKEVVVGKHLDSI 83 (309)
T ss_pred cccceeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCC-CCcchhhHHHHHHHhCCCCCCcceEEEEecCCCCeE
Confidence 34679999999999999999999 4579999999987543222 1223567899999999999999999998765 568
Q ss_pred EEEEeccCCCChhhhhccCCCccCCCHHHHhhhc
Q 044615 537 FVVYEYLEMGSLAMNLSNDAAAEQFCWTKRMNAI 570 (571)
Q Consensus 537 ~lv~e~~~~G~L~~~l~~~~~~~~l~w~~r~~ia 570 (571)
|+||||+++ +|.+++.... ..++|.+...++
T Consensus 84 ~lv~e~~~~-~l~~~l~~~~--~~l~~~~~~~~~ 114 (309)
T cd07845 84 FLVMEYCEQ-DLASLLDNMP--TPFSESQVKCLM 114 (309)
T ss_pred EEEEecCCC-CHHHHHHhcc--cCCCHHHHHHHH
Confidence 999999974 8888887432 357777766654
No 348
>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo
Probab=98.99 E-value=1.6e-09 Score=106.99 Aligned_cols=96 Identities=26% Similarity=0.340 Sum_probs=78.9
Q ss_pred cCeeeccCcceEEEEEc-CCCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhcCCCCcccEEEEEEeCCeeEEEEeccCC
Q 044615 467 GHCIGNGGQGSVYKAKL-PTGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKIRHRNIVKFYGFCSHALHSFVVYEYLEM 545 (571)
Q Consensus 467 ~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~ 545 (571)
...||+|+||.||++.. .++..||||.+.... ......+.+|+.+++.++|||++++++++...+..|+||||+++
T Consensus 25 ~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~---~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~ 101 (292)
T cd06657 25 FIKIGEGSTGIVCIATVKSSGKLVAVKKMDLRK---QQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEG 101 (292)
T ss_pred HHHcCCCCCeEEEEEEEcCCCeEEEEEEecccc---hhHHHHHHHHHHHHHhcCCcchhheeeEEEeCCEEEEEEecCCC
Confidence 35699999999999984 578999999985432 23356799999999999999999999999999999999999999
Q ss_pred CChhhhhccCCCccCCCHHHHhhh
Q 044615 546 GSLAMNLSNDAAAEQFCWTKRMNA 569 (571)
Q Consensus 546 G~L~~~l~~~~~~~~l~w~~r~~i 569 (571)
++|.+++... .++|.....+
T Consensus 102 ~~L~~~~~~~----~~~~~~~~~~ 121 (292)
T cd06657 102 GALTDIVTHT----RMNEEQIAAV 121 (292)
T ss_pred CcHHHHHhcC----CCCHHHHHHH
Confidence 9999987543 3555554443
No 349
>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2. Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin
Probab=98.99 E-value=2.4e-09 Score=106.58 Aligned_cols=103 Identities=27% Similarity=0.373 Sum_probs=82.5
Q ss_pred CCccCeeeccCcceEEEEE-cCCCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhcCCCCcccEEEEEEeCCeeEEEEec
Q 044615 464 FDDGHCIGNGGQGSVYKAK-LPTGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKIRHRNIVKFYGFCSHALHSFVVYEY 542 (571)
Q Consensus 464 ~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 542 (571)
|+..+.||+|+||.||+|. ..++..+|+|.+...........+++.+|++++++++|||++++++++......|+||||
T Consensus 17 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 96 (308)
T cd06634 17 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEY 96 (308)
T ss_pred HHHHHheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCcccEEEEEEcCCeeEEEEEc
Confidence 6667889999999999999 457889999998754333334456788999999999999999999999999999999999
Q ss_pred cCCCChhhhhccCCCccCCCHHHHhhh
Q 044615 543 LEMGSLAMNLSNDAAAEQFCWTKRMNA 569 (571)
Q Consensus 543 ~~~G~L~~~l~~~~~~~~l~w~~r~~i 569 (571)
+. |++.+.+.... ..+++.+...+
T Consensus 97 ~~-~~l~~~~~~~~--~~l~~~~~~~~ 120 (308)
T cd06634 97 CL-GSASDLLEVHK--KPLQEVEIAAV 120 (308)
T ss_pred cC-CCHHHHHHHcC--CCCCHHHHHHH
Confidence 97 68888775432 24666665544
No 350
>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4. Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin
Probab=98.99 E-value=2.1e-09 Score=106.71 Aligned_cols=103 Identities=21% Similarity=0.371 Sum_probs=79.9
Q ss_pred cCCCccCeeeccCcceEEEEEc-CCCC----EEEEEEccCCCCCchHhHHHHHHHHHHHhhcCCCCcccEEEEEEeCCee
Q 044615 462 NNFDDGHCIGNGGQGSVYKAKL-PTGE----IVDVKKFHSPLPDEMACQQEFLNEVNALTKIRHRNIVKFYGFCSHALHS 536 (571)
Q Consensus 462 ~~~~~~~~lg~G~~g~V~~~~~-~~~~----~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~ 536 (571)
++|+..+.||+|+||.||+|.. .++. .||+|.+..... .....++.+|+.++++++||||++++++|... ..
T Consensus 7 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~-~~ 83 (303)
T cd05110 7 TELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTG--PKANVEFMDEALIMASMDHPHLVRLLGVCLSP-TI 83 (303)
T ss_pred hhceeccccccCCCccEEEEEEecCCCcceeeEEEEeccccCC--HHHHHHHHHHHHHHHhCCCCCcccEEEEEcCC-Cc
Confidence 4578889999999999999984 4554 478898864322 23345789999999999999999999999754 46
Q ss_pred EEEEeccCCCChhhhhccCCCccCCCHHHHhhh
Q 044615 537 FVVYEYLEMGSLAMNLSNDAAAEQFCWTKRMNA 569 (571)
Q Consensus 537 ~lv~e~~~~G~L~~~l~~~~~~~~l~w~~r~~i 569 (571)
++++||+++|+|.+++..... .+.|...+.+
T Consensus 84 ~~v~e~~~~g~l~~~~~~~~~--~~~~~~~~~~ 114 (303)
T cd05110 84 QLVTQLMPHGCLLDYVHEHKD--NIGSQLLLNW 114 (303)
T ss_pred eeeehhcCCCCHHHHHHhccc--CCCHHHHHHH
Confidence 799999999999999975432 3566655544
No 351
>PHA03209 serine/threonine kinase US3; Provisional
Probab=98.99 E-value=1.5e-09 Score=110.43 Aligned_cols=99 Identities=14% Similarity=0.126 Sum_probs=81.9
Q ss_pred HccCCCccCeeeccCcceEEEEEc-CCCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhcCCCCcccEEEEEEeCCeeEE
Q 044615 460 ATNNFDDGHCIGNGGQGSVYKAKL-PTGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKIRHRNIVKFYGFCSHALHSFV 538 (571)
Q Consensus 460 ~~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~l 538 (571)
...+|++.+.||+|+||.||+|.. .+++.||+|..... ....|+.++++++|||||++++++.+....++
T Consensus 64 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~---------~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 134 (357)
T PHA03209 64 ASLGYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQKG---------TTLIEAMLLQNVNHPSVIRMKDTLVSGAITCM 134 (357)
T ss_pred hhcCcEEEEEecCCCCeEEEEEEECCCCceEEEEeCCcc---------ccHHHHHHHHhCCCCCCcChhheEEeCCeeEE
Confidence 345799999999999999999994 46788999985432 23468999999999999999999999999999
Q ss_pred EEeccCCCChhhhhccCCCccCCCHHHHhhhc
Q 044615 539 VYEYLEMGSLAMNLSNDAAAEQFCWTKRMNAI 570 (571)
Q Consensus 539 v~e~~~~G~L~~~l~~~~~~~~l~w~~r~~ia 570 (571)
||||+. |+|.+++.... ..++|..+.+|+
T Consensus 135 v~e~~~-~~l~~~l~~~~--~~~~~~~~~~i~ 163 (357)
T PHA03209 135 VLPHYS-SDLYTYLTKRS--RPLPIDQALIIE 163 (357)
T ss_pred EEEccC-CcHHHHHHhcc--CCCCHHHHHHHH
Confidence 999995 68999887533 357888877765
No 352
>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the
Probab=98.98 E-value=1.2e-09 Score=105.10 Aligned_cols=97 Identities=25% Similarity=0.284 Sum_probs=80.6
Q ss_pred eeccCcceEEEEEc-CCCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhcCCCCcccEEEEEEeCCeeEEEEeccCCCCh
Q 044615 470 IGNGGQGSVYKAKL-PTGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKIRHRNIVKFYGFCSHALHSFVVYEYLEMGSL 548 (571)
Q Consensus 470 lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~G~L 548 (571)
||+|+||.||++.. .+++.+|+|.+.............+..|++++++++||||+++++.+..+...|+||||+++++|
T Consensus 1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L 80 (250)
T cd05123 1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLHYAFQTEEKLYLVLEYAPGGEL 80 (250)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCCCcHHHHHHHeecCCeeEEEEecCCCCcH
Confidence 69999999999994 46899999998765444333466799999999999999999999999999999999999999999
Q ss_pred hhhhccCCCccCCCHHHHhhh
Q 044615 549 AMNLSNDAAAEQFCWTKRMNA 569 (571)
Q Consensus 549 ~~~l~~~~~~~~l~w~~r~~i 569 (571)
.+++.... .++|.....+
T Consensus 81 ~~~l~~~~---~l~~~~~~~~ 98 (250)
T cd05123 81 FSHLSKEG---RFSEERARFY 98 (250)
T ss_pred HHHHHhcC---CCCHHHHHHH
Confidence 99997543 3566655544
No 353
>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun
Probab=98.98 E-value=2.9e-09 Score=104.80 Aligned_cols=99 Identities=28% Similarity=0.333 Sum_probs=81.5
Q ss_pred CCccCeeeccCcceEEEEE-cCCCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhcCCCCcccEEEEEEeCCeeEEEEec
Q 044615 464 FDDGHCIGNGGQGSVYKAK-LPTGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKIRHRNIVKFYGFCSHALHSFVVYEY 542 (571)
Q Consensus 464 ~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 542 (571)
|...+.||+|++|.||++. ..+++.+|+|.+.... ....+.+.+|+.+++.++||||+++++++...+..++|+||
T Consensus 21 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~---~~~~~~~~~e~~~l~~~~h~~vv~~~~~~~~~~~~~~v~e~ 97 (285)
T cd06648 21 LDNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLRK---QQRRELLFNEVVIMRDYQHPNIVEMYSSYLVGDELWVVMEF 97 (285)
T ss_pred hhcceEeccCCCeEEEEEEECCCCCEEEEEEEeccc---hhHHHHHHHHHHHHHHcCCCChheEEEEEEcCCeEEEEEec
Confidence 4455789999999999998 4578999999986432 22346688999999999999999999999999999999999
Q ss_pred cCCCChhhhhccCCCccCCCHHHHhhh
Q 044615 543 LEMGSLAMNLSNDAAAEQFCWTKRMNA 569 (571)
Q Consensus 543 ~~~G~L~~~l~~~~~~~~l~w~~r~~i 569 (571)
+++++|.+++... .+++.+...|
T Consensus 98 ~~~~~L~~~~~~~----~~~~~~~~~~ 120 (285)
T cd06648 98 LEGGALTDIVTHT----RMNEEQIATV 120 (285)
T ss_pred cCCCCHHHHHHhC----CCCHHHHHHH
Confidence 9999999998752 3566655544
No 354
>KOG0531 consensus Protein phosphatase 1, regulatory subunit, and related proteins [Signal transduction mechanisms]
Probab=98.98 E-value=5.6e-11 Score=122.92 Aligned_cols=225 Identities=32% Similarity=0.354 Sum_probs=102.0
Q ss_pred ccCCCCCCEEecccCcCcccccccccCCCCCCEEEcccCcCcccccccccCCCCCCeeecccCcCcccCCccccCCCCCC
Q 044615 93 IGNMKSLSDLQLSENILNGSIPLALGNLTNLVVLDLSTNKLSGSIPLSFANLTSLSILYLYENSLCDSIPKEIGNMNSLS 172 (571)
Q Consensus 93 ~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~ 172 (571)
+..+.+|+.|++.+|.|... ...+..+++|++|++++|.|+... .+..++.|+.|++.+|.+... ..+..+++|+
T Consensus 91 l~~~~~l~~l~l~~n~i~~i-~~~l~~~~~L~~L~ls~N~I~~i~--~l~~l~~L~~L~l~~N~i~~~--~~~~~l~~L~ 165 (414)
T KOG0531|consen 91 LSKLKSLEALDLYDNKIEKI-ENLLSSLVNLQVLDLSFNKITKLE--GLSTLTLLKELNLSGNLISDI--SGLESLKSLK 165 (414)
T ss_pred cccccceeeeeccccchhhc-ccchhhhhcchheecccccccccc--chhhccchhhheeccCcchhc--cCCccchhhh
Confidence 44455566666666665522 222455556666666666655332 234455556666666665432 2344455555
Q ss_pred EEEccCCCCCccCChhhhhccCCCcEEEccCCcccccCCccccCCCCCcEEeCccCcCcCCCChhhhCCCCCCEEEcccC
Q 044615 173 ILDLSSNKLNGSIPLSLANLTNSLKVLYLSSNHIVGEIPLGHGMLSSLIQLTLNNNELSGQLSPELGSLIQLEYLDLSAN 252 (571)
Q Consensus 173 ~L~L~~n~l~~~~p~~~~~l~~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n 252 (571)
.+++++|.+...-+.....+.. ++.+++.+|.+... ..+..+..+..+++..|
T Consensus 166 ~l~l~~n~i~~ie~~~~~~~~~-l~~l~l~~n~i~~i--------------------------~~~~~~~~l~~~~l~~n 218 (414)
T KOG0531|consen 166 LLDLSYNRIVDIENDELSELIS-LEELDLGGNSIREI--------------------------EGLDLLKKLVLLSLLDN 218 (414)
T ss_pred cccCCcchhhhhhhhhhhhccc-hHHHhccCCchhcc--------------------------cchHHHHHHHHhhcccc
Confidence 5556555555222100123332 55555555544311 11222222333344444
Q ss_pred ccccccchhhccCC--CCCEEEcCCccCccCcchhhhcccCCCEEEccCCcCCcccchhccCCCCCCEEEccCCcCccc-
Q 044615 253 TFHKSIPESLSNLV--KLHYLNLSNNQFSQKIPNKIEKLIHLSELDLSHNIFREEIPSQICSMQSLEKLNLSHNNLSGS- 329 (571)
Q Consensus 253 ~l~~~~~~~l~~l~--~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~- 329 (571)
.++..- .+..+. +|+.+++++|.+.. .+..+..+..+..|++.+|++...- .+...+.+..+.+..|.+...
T Consensus 219 ~i~~~~--~l~~~~~~~L~~l~l~~n~i~~-~~~~~~~~~~l~~l~~~~n~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 293 (414)
T KOG0531|consen 219 KISKLE--GLNELVMLHLRELYLSGNRISR-SPEGLENLKNLPVLDLSSNRISNLE--GLERLPKLSELWLNDNKLALSE 293 (414)
T ss_pred cceecc--CcccchhHHHHHHhcccCcccc-ccccccccccccccchhhccccccc--cccccchHHHhccCcchhcchh
Confidence 443211 111111 24555555555542 1133444555556666655554321 133344445555555554421
Q ss_pred --cccc-cccCCCCCEEECcCCcCcccC
Q 044615 330 --IPRC-FEEMHWLSCIDISYNALQGLI 354 (571)
Q Consensus 330 --~p~~-~~~l~~L~~L~ls~N~l~~~~ 354 (571)
.... ....+.++.+.+.+|......
T Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (414)
T KOG0531|consen 294 AISQEYITSAAPTLVTLTLELNPIRKIS 321 (414)
T ss_pred hhhccccccccccccccccccCcccccc
Confidence 1111 334456666666666665443
No 355
>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]
Probab=98.97 E-value=6.9e-10 Score=105.70 Aligned_cols=94 Identities=27% Similarity=0.392 Sum_probs=77.7
Q ss_pred ccCCCccCeeeccCcceEEEEE-cCCCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhcCCCCcccEEEEEEe-----CC
Q 044615 461 TNNFDDGHCIGNGGQGSVYKAK-LPTGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKIRHRNIVKFYGFCSH-----AL 534 (571)
Q Consensus 461 ~~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~-----~~ 534 (571)
...|...+.||+|+||.|+.+. ..+|+.||||++...- ......++-.||++++++++|+|||.+.+.+.. -+
T Consensus 21 ~~~y~~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F-~~~~~akRtlRElklLr~~~HeNIi~l~di~~p~~~~~f~ 99 (359)
T KOG0660|consen 21 PRYYVLIEPIGRGAYGVVCSAKDKRTGEKVAIKKILNPF-ENQIDAKRTLRELKLLRHLRHENIIGLLDIFRPPSRDKFN 99 (359)
T ss_pred cceecccccccCcceeeEEEEEEcCCCCEeehhhhhhhh-hchHHHHHHHHHHHHHHHhcCCCcceEEeecccccccccc
Confidence 3456667899999999999998 6689999999996332 333456788899999999999999999999866 35
Q ss_pred eeEEEEeccCCCChhhhhccCC
Q 044615 535 HSFVVYEYLEMGSLAMNLSNDA 556 (571)
Q Consensus 535 ~~~lv~e~~~~G~L~~~l~~~~ 556 (571)
.+|+|+|+|+. ||.+.|+.+.
T Consensus 100 DvYiV~elMet-DL~~iik~~~ 120 (359)
T KOG0660|consen 100 DVYLVFELMET-DLHQIIKSQQ 120 (359)
T ss_pred eeEEehhHHhh-HHHHHHHcCc
Confidence 78999999965 9999998654
No 356
>PTZ00036 glycogen synthase kinase; Provisional
Probab=98.97 E-value=2e-09 Score=112.39 Aligned_cols=100 Identities=22% Similarity=0.267 Sum_probs=74.7
Q ss_pred ccCCCccCeeeccCcceEEEEE-cCCCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhcCCCCcccEEEEEEeC------
Q 044615 461 TNNFDDGHCIGNGGQGSVYKAK-LPTGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKIRHRNIVKFYGFCSHA------ 533 (571)
Q Consensus 461 ~~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~------ 533 (571)
..+|...+.||+|+||.||+|. ..+++.||||++.... ....+|+.++++++|||||++++++...
T Consensus 65 ~~~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~-------~~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~~~ 137 (440)
T PTZ00036 65 NKSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDP-------QYKNRELLIMKNLNHINIIFLKDYYYTECFKKNE 137 (440)
T ss_pred CCeEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecCc-------chHHHHHHHHHhcCCCCCcceeeeEeecccccCC
Confidence 4579999999999999999998 4578999999885432 2234799999999999999999987542
Q ss_pred --CeeEEEEeccCCCChhhhhccC-CCccCCCHHHHhh
Q 044615 534 --LHSFVVYEYLEMGSLAMNLSND-AAAEQFCWTKRMN 568 (571)
Q Consensus 534 --~~~~lv~e~~~~G~L~~~l~~~-~~~~~l~w~~r~~ 568 (571)
..+++||||+++ ++.+++... .....+++.....
T Consensus 138 ~~~~l~lvmE~~~~-~l~~~~~~~~~~~~~l~~~~~~~ 174 (440)
T PTZ00036 138 KNIFLNVVMEFIPQ-TVHKYMKHYARNNHALPLFLVKL 174 (440)
T ss_pred CceEEEEEEecCCc-cHHHHHHHHhhcCCCCCHHHHHH
Confidence 246799999985 777776531 1223455554443
No 357
>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do
Probab=98.97 E-value=3.1e-09 Score=102.97 Aligned_cols=88 Identities=23% Similarity=0.205 Sum_probs=69.3
Q ss_pred CeeeccCcceEEEEE-cCCCCEEEEEEccCCCCCchHhHHHHHHHHHH-HhhcCCCCcccEEEEEEeCCeeEEEEeccCC
Q 044615 468 HCIGNGGQGSVYKAK-LPTGEIVDVKKFHSPLPDEMACQQEFLNEVNA-LTKIRHRNIVKFYGFCSHALHSFVVYEYLEM 545 (571)
Q Consensus 468 ~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~-l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~ 545 (571)
+.||+|+||.||+|. ..+++.||+|.+.+...........+..|..+ ....+|||++++++++...+..|+||||+++
T Consensus 2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 81 (260)
T cd05611 2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQSKDYLYLVMEYLNG 81 (260)
T ss_pred ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEcCCeEEEEEeccCC
Confidence 468999999999998 45789999999875432222223345556554 4456999999999999999999999999999
Q ss_pred CChhhhhccC
Q 044615 546 GSLAMNLSND 555 (571)
Q Consensus 546 G~L~~~l~~~ 555 (571)
|+|.+++...
T Consensus 82 ~~L~~~l~~~ 91 (260)
T cd05611 82 GDCASLIKTL 91 (260)
T ss_pred CCHHHHHHHc
Confidence 9999999753
No 358
>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check
Probab=98.97 E-value=8.1e-10 Score=107.04 Aligned_cols=108 Identities=19% Similarity=0.140 Sum_probs=82.3
Q ss_pred CCCccCeeeccCcceEEEEEc-CCCCEEEEEEccCCCCC--chHhHHHHHHHHHHHhhcCCCCcccEEEEEEeCCeeEEE
Q 044615 463 NFDDGHCIGNGGQGSVYKAKL-PTGEIVDVKKFHSPLPD--EMACQQEFLNEVNALTKIRHRNIVKFYGFCSHALHSFVV 539 (571)
Q Consensus 463 ~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~--~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv 539 (571)
.|.+.+.||+|+||.||++.. ..+..+++|.++..... ......++.+|+.++++++||||+++++++.+....++|
T Consensus 1 ~y~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 80 (260)
T cd08222 1 RYILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFHASFLERDAFCII 80 (260)
T ss_pred CceeeeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHHHHHHHHhcCCceEEE
Confidence 377889999999999999984 34555666665532221 112344677899999999999999999999999999999
Q ss_pred EeccCCCChhhhhccC-CCccCCCHHHHhhhc
Q 044615 540 YEYLEMGSLAMNLSND-AAAEQFCWTKRMNAI 570 (571)
Q Consensus 540 ~e~~~~G~L~~~l~~~-~~~~~l~w~~r~~ia 570 (571)
|||+++++|.+++... .....++|...+.++
T Consensus 81 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 112 (260)
T cd08222 81 TEYCEGRDLDCKLEELKHTGKTLSENQVCEWF 112 (260)
T ss_pred EEeCCCCCHHHHHHHHhhcccccCHHHHHHHH
Confidence 9999999999988642 223467887766654
No 359
>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12
Probab=98.97 E-value=3.3e-09 Score=107.36 Aligned_cols=105 Identities=18% Similarity=0.339 Sum_probs=82.4
Q ss_pred HccCCCccCeeeccCcceEEEEE-cCCCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhcCCCCcccEEEEEEeCC----
Q 044615 460 ATNNFDDGHCIGNGGQGSVYKAK-LPTGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKIRHRNIVKFYGFCSHAL---- 534 (571)
Q Consensus 460 ~~~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~---- 534 (571)
..++|+..+.||+|+||.||+|. ..++..||||++.... ......+.+.+|++++++++||||+++++++....
T Consensus 13 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 91 (343)
T cd07880 13 VPDRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPF-QSELFAKRAYRELRLLKHMKHENVIGLLDVFTPDLSLDR 91 (343)
T ss_pred cccceEEEEEeeecCCeEEEEEEECCCCcEEEEEEecccc-cchHHHHHHHHHHHHHHhcCCCCccceeeeecCCccccc
Confidence 35679999999999999999998 5689999999986432 22233456889999999999999999999987653
Q ss_pred --eeEEEEeccCCCChhhhhccCCCccCCCHHHHhhhc
Q 044615 535 --HSFVVYEYLEMGSLAMNLSNDAAAEQFCWTKRMNAI 570 (571)
Q Consensus 535 --~~~lv~e~~~~G~L~~~l~~~~~~~~l~w~~r~~ia 570 (571)
..++||||+ +++|.+++... .++|.....|+
T Consensus 92 ~~~~~lv~e~~-~~~l~~~~~~~----~l~~~~~~~i~ 124 (343)
T cd07880 92 FHDFYLVMPFM-GTDLGKLMKHE----KLSEDRIQFLV 124 (343)
T ss_pred cceEEEEEecC-CCCHHHHHhcC----CCCHHHHHHHH
Confidence 458999999 77998888642 35666555443
No 360
>KOG4658 consensus Apoptotic ATPase [Signal transduction mechanisms]
Probab=98.96 E-value=3.7e-10 Score=124.79 Aligned_cols=126 Identities=25% Similarity=0.254 Sum_probs=83.5
Q ss_pred CCCCEEEccCCccc----cCCCCccceeecccccccCCCCCCCccccc-cccCCCCCCEEecccCcCcccccccccCCCC
Q 044615 48 VQARDTSISFDELH----EKLLTFEATAHFSVLAFTGQDWPLYSSIPD-EIGNMKSLSDLQLSENILNGSIPLALGNLTN 122 (571)
Q Consensus 48 ~~l~~l~l~~n~l~----~~~l~~l~~l~l~~n~l~~~~~~~~~~~p~-~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~ 122 (571)
...+...+-.|.+. -...+.|++|-+..|.. .+..++. .|..++.|++|||++|.-.+.+|..++.|-+
T Consensus 523 ~~~rr~s~~~~~~~~~~~~~~~~~L~tLll~~n~~------~l~~is~~ff~~m~~LrVLDLs~~~~l~~LP~~I~~Li~ 596 (889)
T KOG4658|consen 523 NSVRRMSLMNNKIEHIAGSSENPKLRTLLLQRNSD------WLLEISGEFFRSLPLLRVLDLSGNSSLSKLPSSIGELVH 596 (889)
T ss_pred hheeEEEEeccchhhccCCCCCCccceEEEeecch------hhhhcCHHHHhhCcceEEEECCCCCccCcCChHHhhhhh
Confidence 45566666666554 22344566666666642 0012333 3566788888888877666677777888888
Q ss_pred CCEEEcccCcCcccccccccCCCCCCeeecccCcCcccCCccccCCCCCCEEEccCCC
Q 044615 123 LVVLDLSTNKLSGSIPLSFANLTSLSILYLYENSLCDSIPKEIGNMNSLSILDLSSNK 180 (571)
Q Consensus 123 L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~ 180 (571)
|+.|+|+++.++ .+|..+++|..|.+|++..+.....+|.....|++|++|.+....
T Consensus 597 LryL~L~~t~I~-~LP~~l~~Lk~L~~Lnl~~~~~l~~~~~i~~~L~~Lr~L~l~~s~ 653 (889)
T KOG4658|consen 597 LRYLDLSDTGIS-HLPSGLGNLKKLIYLNLEVTGRLESIPGILLELQSLRVLRLPRSA 653 (889)
T ss_pred hhcccccCCCcc-ccchHHHHHHhhheeccccccccccccchhhhcccccEEEeeccc
Confidence 888888888776 677777888888888877776655556666667778877775543
No 361
>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron. Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca
Probab=98.96 E-value=3.6e-09 Score=102.57 Aligned_cols=97 Identities=22% Similarity=0.360 Sum_probs=74.2
Q ss_pred CeeeccCcceEEEEEcC----CCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhcCCCCcccEEEEEEe-CCeeEEEEec
Q 044615 468 HCIGNGGQGSVYKAKLP----TGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKIRHRNIVKFYGFCSH-ALHSFVVYEY 542 (571)
Q Consensus 468 ~~lg~G~~g~V~~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~-~~~~~lv~e~ 542 (571)
+.||+|+||.||+|... .+..||+|.+.... .....+.+.+|+.+++.++||||+++++++.. ++..++||||
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~--~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~ 78 (262)
T cd05058 1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRIT--DLEEVEQFLKEGIIMKDFSHPNVLSLLGICLPSEGSPLVVLPY 78 (262)
T ss_pred CcccccCCceEEEEEEecCCCceEEEEEEecCccC--CHHHHHHHHHHHHHHccCCCCCcceEEEEeecCCCCcEEEEec
Confidence 36899999999999842 24579999985422 22345778999999999999999999998764 5568899999
Q ss_pred cCCCChhhhhccCCCccCCCHHHHhh
Q 044615 543 LEMGSLAMNLSNDAAAEQFCWTKRMN 568 (571)
Q Consensus 543 ~~~G~L~~~l~~~~~~~~l~w~~r~~ 568 (571)
+++|+|.+++.+... .+.|...+.
T Consensus 79 ~~~~~L~~~~~~~~~--~~~~~~~~~ 102 (262)
T cd05058 79 MKHGDLRNFIRSETH--NPTVKDLIG 102 (262)
T ss_pred CCCCCHHHHHHhcCC--CCCHHHHHH
Confidence 999999999975432 245554443
No 362
>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase. Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.
Probab=98.96 E-value=3.5e-09 Score=103.84 Aligned_cols=102 Identities=20% Similarity=0.211 Sum_probs=80.4
Q ss_pred CCccCeeeccCcceEEEEE-cCCCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhcC-CCCcccEEEEEEeC--CeeEEE
Q 044615 464 FDDGHCIGNGGQGSVYKAK-LPTGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKIR-HRNIVKFYGFCSHA--LHSFVV 539 (571)
Q Consensus 464 ~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~-H~niv~l~~~~~~~--~~~~lv 539 (571)
|+..+.+|+|+||.||+|. ..+++.||+|++....... ......+|+.++.++. |||++++++++.+. +..++|
T Consensus 1 y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~--~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~lv 78 (282)
T cd07831 1 YKILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSL--EQVNNLREIQALRRLSPHPNILRLIEVLFDRKTGRLALV 78 (282)
T ss_pred CceEeeccccccceEEEEEEcCCCcEEEEEEehhccCCc--hhhhHHHHHHHHhhcCCCCCccceEEEEecCCCCcEEEE
Confidence 5677889999999999999 5578999999987543222 1234457999998885 99999999999987 889999
Q ss_pred EeccCCCChhhhhccCCCccCCCHHHHhhhc
Q 044615 540 YEYLEMGSLAMNLSNDAAAEQFCWTKRMNAI 570 (571)
Q Consensus 540 ~e~~~~G~L~~~l~~~~~~~~l~w~~r~~ia 570 (571)
|||++ |++.+++.... ..++|.+...++
T Consensus 79 ~e~~~-~~l~~~l~~~~--~~~~~~~~~~~~ 106 (282)
T cd07831 79 FELMD-MNLYELIKGRK--RPLPEKRVKSYM 106 (282)
T ss_pred EecCC-ccHHHHHHhcc--CCCCHHHHHHHH
Confidence 99997 58888887533 357888777654
No 363
>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the
Probab=98.96 E-value=3e-09 Score=106.26 Aligned_cols=91 Identities=25% Similarity=0.422 Sum_probs=74.8
Q ss_pred CCCccCeeeccCcceEEEEEc-C--CCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhcCCCCcccEEEEEEeC--CeeE
Q 044615 463 NFDDGHCIGNGGQGSVYKAKL-P--TGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKIRHRNIVKFYGFCSHA--LHSF 537 (571)
Q Consensus 463 ~~~~~~~lg~G~~g~V~~~~~-~--~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~--~~~~ 537 (571)
.|+..+.||+|+||.||+|.. . +++.||+|.+...........+.+.+|+.++++++||||+++++++.+. ...|
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 80 (316)
T cd07842 1 KYEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSLVEVFLEHADKSVY 80 (316)
T ss_pred CceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCCCccceEEEEeCCCCceEE
Confidence 377888999999999999994 4 5889999999864322223346678999999999999999999999988 8899
Q ss_pred EEEeccCCCChhhhhcc
Q 044615 538 VVYEYLEMGSLAMNLSN 554 (571)
Q Consensus 538 lv~e~~~~G~L~~~l~~ 554 (571)
+||||+++ ++.+++..
T Consensus 81 lv~e~~~~-~l~~~~~~ 96 (316)
T cd07842 81 LLFDYAEH-DLWQIIKF 96 (316)
T ss_pred EEEeCCCc-CHHHHHHh
Confidence 99999985 77777753
No 364
>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional
Probab=98.96 E-value=4e-09 Score=102.69 Aligned_cols=105 Identities=17% Similarity=0.167 Sum_probs=78.7
Q ss_pred HHHHHHccCCCccCee--eccCcceEEEEE-cCCCCEEEEEEccCCCCCchHhHHHHHHHHHHHhh-cCCCCcccEEEEE
Q 044615 455 EEIIRATNNFDDGHCI--GNGGQGSVYKAK-LPTGEIVDVKKFHSPLPDEMACQQEFLNEVNALTK-IRHRNIVKFYGFC 530 (571)
Q Consensus 455 ~~~~~~~~~~~~~~~l--g~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~-l~H~niv~l~~~~ 530 (571)
.+.....++|++.+.+ |+|+||.||++. ..++..+|+|.+....... .|+..... .+||||+++++++
T Consensus 7 ~~~~~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~--------~e~~~~~~~~~h~~iv~~~~~~ 78 (267)
T PHA03390 7 SELVQFLKNCEIVKKLKLIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFNA--------IEPMVHQLMKDNPNFIKLYYSV 78 (267)
T ss_pred HHHHHHHHhhccccceeecCCCceEEEEEEEcCCCcEEEEEEEehhhcch--------hhHHHHHHhhcCCCEEEEEEEE
Confidence 3444445677777766 999999999999 4578999999986542211 12222221 2799999999999
Q ss_pred EeCCeeEEEEeccCCCChhhhhccCCCccCCCHHHHhhhc
Q 044615 531 SHALHSFVVYEYLEMGSLAMNLSNDAAAEQFCWTKRMNAI 570 (571)
Q Consensus 531 ~~~~~~~lv~e~~~~G~L~~~l~~~~~~~~l~w~~r~~ia 570 (571)
...+..|+||||+++|+|.+++.... .++|.+...++
T Consensus 79 ~~~~~~~iv~e~~~~~~L~~~l~~~~---~l~~~~~~~~~ 115 (267)
T PHA03390 79 TTLKGHVLIMDYIKDGDLFDLLKKEG---KLSEAEVKKII 115 (267)
T ss_pred ecCCeeEEEEEcCCCCcHHHHHHhcC---CCCHHHHHHHH
Confidence 99999999999999999999997543 57787776654
No 365
>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U
Probab=98.96 E-value=1.6e-09 Score=108.96 Aligned_cols=96 Identities=26% Similarity=0.351 Sum_probs=78.9
Q ss_pred HHHHccCCCccCeeeccCcceEEEEE-cCCCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhcCCCCcccEEEEEEe-CC
Q 044615 457 IIRATNNFDDGHCIGNGGQGSVYKAK-LPTGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKIRHRNIVKFYGFCSH-AL 534 (571)
Q Consensus 457 ~~~~~~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~-~~ 534 (571)
+...+++|+..+.||+|+||.||+|. ..++..||||++.+.... ....+.+.+|++++.+++||||+++++++.. ..
T Consensus 5 ~~~~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~ 83 (328)
T cd07856 5 VFEITNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFST-PVLAKRTYRELKLLKHLRHENIISLSDIFISPLE 83 (328)
T ss_pred eeccccceEEEEeecccCCeEEEEEEECCCCCEEEEEEecccccc-cchhHHHHHHHHHHHhcCCCCeeeEeeeEecCCC
Confidence 34567789999999999999999998 558999999998654322 2334678899999999999999999999876 56
Q ss_pred eeEEEEeccCCCChhhhhcc
Q 044615 535 HSFVVYEYLEMGSLAMNLSN 554 (571)
Q Consensus 535 ~~~lv~e~~~~G~L~~~l~~ 554 (571)
..|+||||+ +++|.++++.
T Consensus 84 ~~~lv~e~~-~~~L~~~~~~ 102 (328)
T cd07856 84 DIYFVTELL-GTDLHRLLTS 102 (328)
T ss_pred cEEEEeehh-ccCHHHHHhc
Confidence 789999998 5689888864
No 366
>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14
Probab=98.96 E-value=3.5e-09 Score=107.28 Aligned_cols=112 Identities=20% Similarity=0.286 Sum_probs=86.9
Q ss_pred cHHHHHHHccCCCccCeeeccCcceEEEEE-cCCCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhcCCCCcccEEEEEE
Q 044615 453 VHEEIIRATNNFDDGHCIGNGGQGSVYKAK-LPTGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKIRHRNIVKFYGFCS 531 (571)
Q Consensus 453 ~~~~~~~~~~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~ 531 (571)
..+++...+++|+..+.||+|+||.||+|. ..+++.||+|++..... .....+.+.+|+.++.+++||||+++++++.
T Consensus 8 ~~~~~~~~~~~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~Ei~~l~~l~h~~iv~~~~~~~ 86 (345)
T cd07877 8 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ-SIIHAKRTYRELRLLKHMKHENVIGLLDVFT 86 (345)
T ss_pred HHHHHhhccCceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcch-hhHHHHHHHHHHHHHHHcCCCcccceeeeee
Confidence 345666778899999999999999999998 56899999999875322 2233466889999999999999999999886
Q ss_pred eC------CeeEEEEeccCCCChhhhhccCCCccCCCHHHHhhhc
Q 044615 532 HA------LHSFVVYEYLEMGSLAMNLSNDAAAEQFCWTKRMNAI 570 (571)
Q Consensus 532 ~~------~~~~lv~e~~~~G~L~~~l~~~~~~~~l~w~~r~~ia 570 (571)
.. ...|+++|++ +++|.+++... .++|..+..|+
T Consensus 87 ~~~~~~~~~~~~lv~~~~-~~~L~~~~~~~----~l~~~~~~~i~ 126 (345)
T cd07877 87 PARSLEEFNDVYLVTHLM-GADLNNIVKCQ----KLTDDHVQFLI 126 (345)
T ss_pred ecccccccccEEEEehhc-ccCHHHHHhcC----CCCHHHHHHHH
Confidence 43 3467888876 78998887642 36676666553
No 367
>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines
Probab=98.95 E-value=2.1e-09 Score=105.89 Aligned_cols=104 Identities=16% Similarity=0.223 Sum_probs=82.0
Q ss_pred CCCccCeeeccCcceEEEEEc----CCCCEEEEEEccCCCCC-chHhHHHHHHHHHHHhhc-CCCCcccEEEEEEeCCee
Q 044615 463 NFDDGHCIGNGGQGSVYKAKL----PTGEIVDVKKFHSPLPD-EMACQQEFLNEVNALTKI-RHRNIVKFYGFCSHALHS 536 (571)
Q Consensus 463 ~~~~~~~lg~G~~g~V~~~~~----~~~~~vavK~~~~~~~~-~~~~~~~~~~Ei~~l~~l-~H~niv~l~~~~~~~~~~ 536 (571)
+|++.+.||+|+||.||+++. .+++.||||.+.+.... .....+.+.+|++++.++ +||||+++++.+......
T Consensus 1 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~~~~~ 80 (288)
T cd05583 1 NFELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQTDTKL 80 (288)
T ss_pred CceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeeecCCEE
Confidence 477888999999999999873 35788999998743221 123346788999999999 699999999999999999
Q ss_pred EEEEeccCCCChhhhhccCCCccCCCHHHHhhh
Q 044615 537 FVVYEYLEMGSLAMNLSNDAAAEQFCWTKRMNA 569 (571)
Q Consensus 537 ~lv~e~~~~G~L~~~l~~~~~~~~l~w~~r~~i 569 (571)
|+||||+++|+|.+++.... .+.+.....+
T Consensus 81 ~lv~e~~~~~~L~~~~~~~~---~~~~~~~~~~ 110 (288)
T cd05583 81 HLILDYVNGGELFTHLYQRE---HFTESEVRVY 110 (288)
T ss_pred EEEEecCCCCcHHHHHhhcC---CcCHHHHHHH
Confidence 99999999999999987432 3555544433
No 368
>KOG0531 consensus Protein phosphatase 1, regulatory subunit, and related proteins [Signal transduction mechanisms]
Probab=98.95 E-value=6.1e-11 Score=122.65 Aligned_cols=219 Identities=35% Similarity=0.396 Sum_probs=142.8
Q ss_pred CCCCCCEEEcccCcCcccccccccCCCCCCeeecccCcCcccCCccccCCCCCCEEEccCCCCCccCChhhhhccCCCcE
Q 044615 119 NLTNLVVLDLSTNKLSGSIPLSFANLTSLSILYLYENSLCDSIPKEIGNMNSLSILDLSSNKLNGSIPLSLANLTNSLKV 198 (571)
Q Consensus 119 ~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~~L~~ 198 (571)
.+..++.++++.|.|.. +-..+..+.+|+.|++.+|.+... ...+..+++|++|++++|.|+... .+..++. |+.
T Consensus 70 ~l~~l~~l~l~~n~i~~-~~~~l~~~~~l~~l~l~~n~i~~i-~~~l~~~~~L~~L~ls~N~I~~i~--~l~~l~~-L~~ 144 (414)
T KOG0531|consen 70 SLTSLKELNLRQNLIAK-ILNHLSKLKSLEALDLYDNKIEKI-ENLLSSLVNLQVLDLSFNKITKLE--GLSTLTL-LKE 144 (414)
T ss_pred HhHhHHhhccchhhhhh-hhcccccccceeeeeccccchhhc-ccchhhhhcchheecccccccccc--chhhccc-hhh
Confidence 44455555566666542 223355666666666666666532 222556677777777777776432 2344444 777
Q ss_pred EEccCCcccccCCccccCCCCCcEEeCccCcCcCCCC-hhhhCCCCCCEEEcccCccccccchhhccCCCCCEEEcCCcc
Q 044615 199 LYLSSNHIVGEIPLGHGMLSSLIQLTLNNNELSGQLS-PELGSLIQLEYLDLSANTFHKSIPESLSNLVKLHYLNLSNNQ 277 (571)
Q Consensus 199 L~l~~n~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~-~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~n~ 277 (571)
|++++|.|+.. ..+..++.|+.+++++|++...-+ . ...+.+++.+++.+|.+... ..+..+..+..+++..|.
T Consensus 145 L~l~~N~i~~~--~~~~~l~~L~~l~l~~n~i~~ie~~~-~~~~~~l~~l~l~~n~i~~i--~~~~~~~~l~~~~l~~n~ 219 (414)
T KOG0531|consen 145 LNLSGNLISDI--SGLESLKSLKLLDLSYNRIVDIENDE-LSELISLEELDLGGNSIREI--EGLDLLKKLVLLSLLDNK 219 (414)
T ss_pred heeccCcchhc--cCCccchhhhcccCCcchhhhhhhhh-hhhccchHHHhccCCchhcc--cchHHHHHHHHhhccccc
Confidence 77777777532 234457788888888888875544 2 57788999999999988533 445555666667899999
Q ss_pred CccCcchhhhccc--CCCEEEccCCcCCcccchhccCCCCCCEEEccCCcCccccccccccCCCCCEEECcCCcCcc
Q 044615 278 FSQKIPNKIEKLI--HLSELDLSHNIFREEIPSQICSMQSLEKLNLSHNNLSGSIPRCFEEMHWLSCIDISYNALQG 352 (571)
Q Consensus 278 l~~~~~~~~~~l~--~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~ls~N~l~~ 352 (571)
++...+ +..+. +|+.+++++|.+.. .+..+..+..+..|++.+|++... ..+.....+..+....|.+..
T Consensus 220 i~~~~~--l~~~~~~~L~~l~l~~n~i~~-~~~~~~~~~~l~~l~~~~n~~~~~--~~~~~~~~~~~~~~~~~~~~~ 291 (414)
T KOG0531|consen 220 ISKLEG--LNELVMLHLRELYLSGNRISR-SPEGLENLKNLPVLDLSSNRISNL--EGLERLPKLSELWLNDNKLAL 291 (414)
T ss_pred ceeccC--cccchhHHHHHHhcccCcccc-ccccccccccccccchhhcccccc--ccccccchHHHhccCcchhcc
Confidence 875432 22233 38999999999875 335577888999999999998743 234445556666677777653
No 369
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=98.95 E-value=3.8e-09 Score=107.69 Aligned_cols=92 Identities=23% Similarity=0.354 Sum_probs=74.7
Q ss_pred HccCCCccCeeeccCcceEEEEE-cCCCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhcCCCCcccEEEEEEeCC----
Q 044615 460 ATNNFDDGHCIGNGGQGSVYKAK-LPTGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKIRHRNIVKFYGFCSHAL---- 534 (571)
Q Consensus 460 ~~~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~---- 534 (571)
..++|+..+.||+|+||.||+|. ..+|..||||++...... ......+.+|+.+++.++||||+++++++....
T Consensus 19 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 97 (359)
T cd07876 19 VLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQN-QTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKSLEE 97 (359)
T ss_pred hhhceEEEEEeecCCCEEEEEEEEcCCCceeEEEEecccccc-hhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCCccc
Confidence 34679999999999999999998 457999999999754322 234567889999999999999999999986543
Q ss_pred --eeEEEEeccCCCChhhhhc
Q 044615 535 --HSFVVYEYLEMGSLAMNLS 553 (571)
Q Consensus 535 --~~~lv~e~~~~G~L~~~l~ 553 (571)
..|+||||+++ ++.+.++
T Consensus 98 ~~~~~lv~e~~~~-~l~~~~~ 117 (359)
T cd07876 98 FQDVYLVMELMDA-NLCQVIH 117 (359)
T ss_pred cceeEEEEeCCCc-CHHHHHh
Confidence 57999999975 5766664
No 370
>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl
Probab=98.94 E-value=3.7e-09 Score=105.27 Aligned_cols=105 Identities=28% Similarity=0.428 Sum_probs=80.6
Q ss_pred cCCCccCeeeccCcceEEEEE-cCCCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhcCCCCcccEEEEEEeCC------
Q 044615 462 NNFDDGHCIGNGGQGSVYKAK-LPTGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKIRHRNIVKFYGFCSHAL------ 534 (571)
Q Consensus 462 ~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~------ 534 (571)
++|+..+.||+|+||.||+|. ..+++.||||.+....... .....+.+|++++++++||||+++++++....
T Consensus 12 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~-~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 90 (310)
T cd07865 12 SKYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKE-GFPITALREIKILQLLKHENVVNLIEICRTKATPYNRY 90 (310)
T ss_pred hheEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCCcC-CchhHHHHHHHHHHhCCCCCccceEEEEecccccccCC
Confidence 468999999999999999999 4579999999986543222 22345678999999999999999999987654
Q ss_pred --eeEEEEeccCCCChhhhhccCCCccCCCHHHHhhhc
Q 044615 535 --HSFVVYEYLEMGSLAMNLSNDAAAEQFCWTKRMNAI 570 (571)
Q Consensus 535 --~~~lv~e~~~~G~L~~~l~~~~~~~~l~w~~r~~ia 570 (571)
..++||||+.+ ++.+++.... ..+++.+...++
T Consensus 91 ~~~~~lv~e~~~~-~l~~~l~~~~--~~~~~~~~~~i~ 125 (310)
T cd07865 91 KGSFYLVFEFCEH-DLAGLLSNKN--VKFTLSEIKKVM 125 (310)
T ss_pred CceEEEEEcCCCc-CHHHHHHhcc--cCCCHHHHHHHH
Confidence 35999999974 8888886543 246666655543
No 371
>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3. Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac
Probab=98.94 E-value=5.4e-09 Score=102.03 Aligned_cols=106 Identities=23% Similarity=0.336 Sum_probs=79.9
Q ss_pred CCccCeeeccCcceEEEEEcC----CCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhcCCCCcccEEEEEEeCC-----
Q 044615 464 FDDGHCIGNGGQGSVYKAKLP----TGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKIRHRNIVKFYGFCSHAL----- 534 (571)
Q Consensus 464 ~~~~~~lg~G~~g~V~~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~----- 534 (571)
|.+.+.||+|+||.||+|... +++.||||.+...... ....+++.+|++++++++||||+++++++....
T Consensus 1 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 79 (273)
T cd05074 1 FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFS-SSDIEEFLREAACMKEFDHPNVIKLIGVSLRSRAKGRL 79 (273)
T ss_pred CcchhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCC-hHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCCCCcc
Confidence 566788999999999999742 4688999999754433 234577899999999999999999999886532
Q ss_pred -eeEEEEeccCCCChhhhhccCC---CccCCCHHHHhhhc
Q 044615 535 -HSFVVYEYLEMGSLAMNLSNDA---AAEQFCWTKRMNAI 570 (571)
Q Consensus 535 -~~~lv~e~~~~G~L~~~l~~~~---~~~~l~w~~r~~ia 570 (571)
..++++||+++|+|.+++.... ....+++....+++
T Consensus 80 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~ 119 (273)
T cd05074 80 PIPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFM 119 (273)
T ss_pred cceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHH
Confidence 2478999999999998875321 11245666555543
No 372
>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]
Probab=98.94 E-value=1.6e-09 Score=107.45 Aligned_cols=85 Identities=27% Similarity=0.319 Sum_probs=73.2
Q ss_pred cCeeeccCcceEEEEE-cCCCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhcCCCCcccEEEEEEeCCeeEEEEeccCC
Q 044615 467 GHCIGNGGQGSVYKAK-LPTGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKIRHRNIVKFYGFCSHALHSFVVYEYLEM 545 (571)
Q Consensus 467 ~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~ 545 (571)
.+++|+|.||+||-|. .++|+.||||+|++.+... +...+..+|+.|+..++||.||.+-.-|++.+..+.|||-+.|
T Consensus 569 devLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~-kqesqlR~EVaILq~l~HPGiV~le~M~ET~ervFVVMEKl~G 647 (888)
T KOG4236|consen 569 DEVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPT-KQESQLRNEVAILQNLHHPGIVNLECMFETPERVFVVMEKLHG 647 (888)
T ss_pred HhhccCCcceeeecceecccCceeeeeeeecccCCC-chHHHHHHHHHHHHhcCCCCeeEEEEeecCCceEEEEehhhcc
Confidence 4789999999999998 5699999999998876544 3346788999999999999999999999999999999998875
Q ss_pred CChhhhhc
Q 044615 546 GSLAMNLS 553 (571)
Q Consensus 546 G~L~~~l~ 553 (571)
|..+.|-
T Consensus 648 -DMLEMIL 654 (888)
T KOG4236|consen 648 -DMLEMIL 654 (888)
T ss_pred -hHHHHHH
Confidence 6555554
No 373
>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou
Probab=98.94 E-value=4.1e-09 Score=103.77 Aligned_cols=105 Identities=22% Similarity=0.367 Sum_probs=77.2
Q ss_pred CCCccCeeeccCcceEEEEE-cCCCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhc---CCCCcccEEEEEEeC-----
Q 044615 463 NFDDGHCIGNGGQGSVYKAK-LPTGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKI---RHRNIVKFYGFCSHA----- 533 (571)
Q Consensus 463 ~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l---~H~niv~l~~~~~~~----- 533 (571)
.|++.+.||+|+||.||+|. ..+++.||+|.+....... .....+.+|+.+++++ +||||+++++++...
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~-~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~ 79 (288)
T cd07863 1 QYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNED-GLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRE 79 (288)
T ss_pred CceEeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCC-CCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCC
Confidence 47888999999999999998 4579999999987543222 1223456777776655 799999999998652
Q ss_pred CeeEEEEeccCCCChhhhhccCCCccCCCHHHHhhhc
Q 044615 534 LHSFVVYEYLEMGSLAMNLSNDAAAEQFCWTKRMNAI 570 (571)
Q Consensus 534 ~~~~lv~e~~~~G~L~~~l~~~~~~~~l~w~~r~~ia 570 (571)
...++||||+++ +|.+++..... ..+++.....++
T Consensus 80 ~~~~lv~e~~~~-~l~~~~~~~~~-~~~~~~~~~~~~ 114 (288)
T cd07863 80 TKVTLVFEHVDQ-DLRTYLDKVPP-PGLPAETIKDLM 114 (288)
T ss_pred ceEEEEEccccc-CHHHHHHhcCC-CCCCHHHHHHHH
Confidence 457899999984 89988875322 346666655543
No 374
>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul
Probab=98.93 E-value=3.1e-09 Score=107.34 Aligned_cols=104 Identities=23% Similarity=0.344 Sum_probs=82.1
Q ss_pred ccCCCccCeeeccCcceEEEEEc-CCCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhc-CCCCcccEEEEEEeC--Cee
Q 044615 461 TNNFDDGHCIGNGGQGSVYKAKL-PTGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKI-RHRNIVKFYGFCSHA--LHS 536 (571)
Q Consensus 461 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l-~H~niv~l~~~~~~~--~~~ 536 (571)
.++|+..+.||+|+||.||+|.. .+++.+|||++....... .....+.+|+.+++++ +||||++++++|... ...
T Consensus 6 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~-~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~~~~~~ 84 (337)
T cd07852 6 LRKYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNA-TDAQRTFREIMFLQELGDHPNIVKLLNVIKAENDKDI 84 (337)
T ss_pred hhHHHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeeccccCcc-hhhhhhhHHHHHHHHhcCCCCccceeeeeccCCCceE
Confidence 45688889999999999999994 478899999986432222 2345678899999999 999999999998653 468
Q ss_pred EEEEeccCCCChhhhhccCCCccCCCHHHHhhhc
Q 044615 537 FVVYEYLEMGSLAMNLSNDAAAEQFCWTKRMNAI 570 (571)
Q Consensus 537 ~lv~e~~~~G~L~~~l~~~~~~~~l~w~~r~~ia 570 (571)
|+||||++ ++|.+++... .++|..+..++
T Consensus 85 ~lv~e~~~-~~L~~~~~~~----~~~~~~~~~i~ 113 (337)
T cd07852 85 YLVFEYME-TDLHAVIRAN----ILEDVHKRYIM 113 (337)
T ss_pred EEEecccc-cCHHHHHhcC----CCCHHHHHHHH
Confidence 99999998 5999988743 46777666543
No 375
>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili
Probab=98.93 E-value=1.9e-09 Score=105.80 Aligned_cols=103 Identities=29% Similarity=0.397 Sum_probs=82.6
Q ss_pred CCccCeeeccCcceEEEEEc-CCCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhcC-CCCcccEEEEEEeCCeeEEEEe
Q 044615 464 FDDGHCIGNGGQGSVYKAKL-PTGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKIR-HRNIVKFYGFCSHALHSFVVYE 541 (571)
Q Consensus 464 ~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~-H~niv~l~~~~~~~~~~~lv~e 541 (571)
|++.+.||+|+||.||+|.. .+++.||+|++...... .......+|+..+++++ |||++++++++.+.+..|+|||
T Consensus 1 y~~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~--~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e 78 (283)
T cd07830 1 YKVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYS--WEECMNLREVKSLRKLNEHPNIVKLKEVFRENDELYFVFE 78 (283)
T ss_pred CeeheeeccCCceEEEEEEECCCCcEEEEEEehhhccc--hhHHHHHHHHHHHHhccCCCCchhHHHHhhcCCcEEEEEe
Confidence 56778999999999999995 46889999998754322 12234567999999999 9999999999999999999999
Q ss_pred ccCCCChhhhhccCCCccCCCHHHHhhhc
Q 044615 542 YLEMGSLAMNLSNDAAAEQFCWTKRMNAI 570 (571)
Q Consensus 542 ~~~~G~L~~~l~~~~~~~~l~w~~r~~ia 570 (571)
|+ +|+|.+++.... ...++|.+.+.++
T Consensus 79 ~~-~~~l~~~~~~~~-~~~~~~~~~~~~~ 105 (283)
T cd07830 79 YM-EGNLYQLMKDRK-GKPFSESVIRSII 105 (283)
T ss_pred cC-CCCHHHHHHhcc-cccCCHHHHHHHH
Confidence 99 789999987543 2357787776654
No 376
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is
Probab=98.93 E-value=2.9e-09 Score=107.85 Aligned_cols=105 Identities=17% Similarity=0.260 Sum_probs=80.8
Q ss_pred HHccCCCccCeeeccCcceEEEEE-cCCCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhcCCCCcccEEEEEEeC----
Q 044615 459 RATNNFDDGHCIGNGGQGSVYKAK-LPTGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKIRHRNIVKFYGFCSHA---- 533 (571)
Q Consensus 459 ~~~~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~---- 533 (571)
...+.|+..+.||+|+||.||+|. ..+++.||||.+...... ....+.+.+|++++++++||||+++++++...
T Consensus 12 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 90 (343)
T cd07878 12 EVPERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQS-LIHARRTYRELRLLKHMKHENVIGLLDVFTPATSIE 90 (343)
T ss_pred hhhhhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchhhh-hHHHHHHHHHHHHHHhcCCCchhhhhhhhccccccc
Confidence 345679999999999999999998 568899999998754222 23345678999999999999999999988543
Q ss_pred --CeeEEEEeccCCCChhhhhccCCCccCCCHHHHhhh
Q 044615 534 --LHSFVVYEYLEMGSLAMNLSNDAAAEQFCWTKRMNA 569 (571)
Q Consensus 534 --~~~~lv~e~~~~G~L~~~l~~~~~~~~l~w~~r~~i 569 (571)
...|+++|++ +++|.+++... .+++.....|
T Consensus 91 ~~~~~~~~~~~~-~~~l~~~~~~~----~l~~~~~~~i 123 (343)
T cd07878 91 NFNEVYLVTNLM-GADLNNIVKCQ----KLSDEHVQFL 123 (343)
T ss_pred ccCcEEEEeecC-CCCHHHHHhcC----CCCHHHHHHH
Confidence 4578999988 78998887632 3555554443
No 377
>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=98.92 E-value=8.3e-10 Score=112.81 Aligned_cols=84 Identities=26% Similarity=0.377 Sum_probs=73.7
Q ss_pred eeeccCcceEEEEE-cCCCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhcCCCCcccEEEEEEeCCeeEEEEeccCCCC
Q 044615 469 CIGNGGQGSVYKAK-LPTGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKIRHRNIVKFYGFCSHALHSFVVYEYLEMGS 547 (571)
Q Consensus 469 ~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~G~ 547 (571)
++|+|.||+||.|+ ..+...+|||.+..... ...+....||.+.++++|.|||+++|.+.+++.+-|.||-+|||+
T Consensus 582 VLGKGTYG~VYA~RD~~tqvrIaIKEIpekds---r~~QPLhEEIaLH~~LrHkNIVrYLGs~senGf~kIFMEqVPGGS 658 (1226)
T KOG4279|consen 582 VLGKGTYGTVYAARDMDTQVRIAIKEIPEKDS---REVQPLHEEIALHSTLRHKNIVRYLGSVSENGFFKIFMEQVPGGS 658 (1226)
T ss_pred EeecCceeEEEeeccccceeEEEeeecccccc---hhhccHHHHHHHHHHHhhHhHHHHhhccCCCCeEEEEeecCCCCc
Confidence 69999999999999 55677899999975432 335678899999999999999999999999999999999999999
Q ss_pred hhhhhccC
Q 044615 548 LAMNLSND 555 (571)
Q Consensus 548 L~~~l~~~ 555 (571)
|.++|+..
T Consensus 659 LSsLLrsk 666 (1226)
T KOG4279|consen 659 LSSLLRSK 666 (1226)
T ss_pred HHHHHHhc
Confidence 99999853
No 378
>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the
Probab=98.92 E-value=1.9e-09 Score=105.69 Aligned_cols=103 Identities=27% Similarity=0.390 Sum_probs=84.5
Q ss_pred CCccCeeeccCcceEEEEEc-CCCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhcCCCCcccEEEEEEeCCeeEEEEec
Q 044615 464 FDDGHCIGNGGQGSVYKAKL-PTGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKIRHRNIVKFYGFCSHALHSFVVYEY 542 (571)
Q Consensus 464 ~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 542 (571)
|+..+.||+|+||.||+|.. .+++.||+|.+..... .....+.+.+|+.++++++|||++++++++.+.+..++||||
T Consensus 1 y~~~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~~-~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~ 79 (282)
T cd07829 1 YEKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDNE-EEGIPSTALREISLLKELKHPNIVKLLDVIHTERKLYLVFEY 79 (282)
T ss_pred CeeehcccccCcceEEEeeecCCCcEEEEEEeccccc-cccccHHHHHHHHHHHhcCCCCHHHHHhhhhcCCceEEEecC
Confidence 55667899999999999994 5699999999976531 223346788999999999999999999999999999999999
Q ss_pred cCCCChhhhhccCCCccCCCHHHHhhhc
Q 044615 543 LEMGSLAMNLSNDAAAEQFCWTKRMNAI 570 (571)
Q Consensus 543 ~~~G~L~~~l~~~~~~~~l~w~~r~~ia 570 (571)
++ ++|.+++.+.. ..+++..+.+++
T Consensus 80 ~~-~~l~~~i~~~~--~~~~~~~~~~~~ 104 (282)
T cd07829 80 CD-MDLKKYLDKRP--GPLSPNLIKSIM 104 (282)
T ss_pred cC-cCHHHHHHhhc--cCCCHHHHHHHH
Confidence 98 59999998543 247777777654
No 379
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=98.91 E-value=5.8e-09 Score=106.50 Aligned_cols=92 Identities=20% Similarity=0.343 Sum_probs=74.7
Q ss_pred HccCCCccCeeeccCcceEEEEE-cCCCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhcCCCCcccEEEEEEeC-----
Q 044615 460 ATNNFDDGHCIGNGGQGSVYKAK-LPTGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKIRHRNIVKFYGFCSHA----- 533 (571)
Q Consensus 460 ~~~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~----- 533 (571)
..++|...+.||+|+||.||+|. ..+++.||||++...... ....+.+.+|+.+++.++||||+++++++...
T Consensus 22 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~~~ 100 (364)
T cd07875 22 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQN-QTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEE 100 (364)
T ss_pred hhcceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCccccC-chhHHHHHHHHHHHHhcCCCCccccceeecccccccc
Confidence 34679999999999999999998 457899999999754322 23356788999999999999999999988543
Q ss_pred -CeeEEEEeccCCCChhhhhc
Q 044615 534 -LHSFVVYEYLEMGSLAMNLS 553 (571)
Q Consensus 534 -~~~~lv~e~~~~G~L~~~l~ 553 (571)
...|+||||+++ +|.+++.
T Consensus 101 ~~~~~lv~e~~~~-~l~~~~~ 120 (364)
T cd07875 101 FQDVYIVMELMDA-NLCQVIQ 120 (364)
T ss_pred cCeEEEEEeCCCC-CHHHHHH
Confidence 357999999975 7777775
No 380
>PHA03207 serine/threonine kinase US3; Provisional
Probab=98.90 E-value=4.8e-09 Score=108.17 Aligned_cols=97 Identities=14% Similarity=0.151 Sum_probs=79.7
Q ss_pred cCCCccCeeeccCcceEEEEEc---CCCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhcCCCCcccEEEEEEeCCeeEE
Q 044615 462 NNFDDGHCIGNGGQGSVYKAKL---PTGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKIRHRNIVKFYGFCSHALHSFV 538 (571)
Q Consensus 462 ~~~~~~~~lg~G~~g~V~~~~~---~~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~l 538 (571)
..|.+.+.||+|+||.||++.. ..+..||+|.+... +.+.+|++++++++|||||++++++......|+
T Consensus 92 ~~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~--------~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~l 163 (392)
T PHA03207 92 MQYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGG--------KTPGREIDILKTISHRAIINLIHAYRWKSTVCM 163 (392)
T ss_pred CceEEEEeecCCCCeEEEEEEEcCCccceeEEEEecccc--------ccHHHHHHHHHhcCCCCccceeeeEeeCCEEEE
Confidence 4699999999999999999973 24678999988643 234589999999999999999999999999999
Q ss_pred EEeccCCCChhhhhccCCCccCCCHHHHhhhc
Q 044615 539 VYEYLEMGSLAMNLSNDAAAEQFCWTKRMNAI 570 (571)
Q Consensus 539 v~e~~~~G~L~~~l~~~~~~~~l~w~~r~~ia 570 (571)
||||+. ++|.+++... ..+.|..++.|+
T Consensus 164 v~e~~~-~~l~~~l~~~---~~l~~~~~~~i~ 191 (392)
T PHA03207 164 VMPKYK-CDLFTYVDRS---GPLPLEQAITIQ 191 (392)
T ss_pred EehhcC-CCHHHHHHhc---CCCCHHHHHHHH
Confidence 999996 6899988432 357777776654
No 381
>PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A ....
Probab=98.90 E-value=1.1e-09 Score=79.93 Aligned_cols=59 Identities=42% Similarity=0.535 Sum_probs=31.6
Q ss_pred CCCEEecccCcCcccccccccCCCCCCEEEcccCcCcccccccccCCCCCCeeecccCc
Q 044615 98 SLSDLQLSENILNGSIPLALGNLTNLVVLDLSTNKLSGSIPLSFANLTSLSILYLYENS 156 (571)
Q Consensus 98 ~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~ 156 (571)
+|++|++++|+++...+..|.++++|++|++++|.++...|..|.++++|++|++++|+
T Consensus 2 ~L~~L~l~~n~l~~i~~~~f~~l~~L~~L~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~ 60 (61)
T PF13855_consen 2 NLESLDLSNNKLTEIPPDSFSNLPNLETLDLSNNNLTSIPPDAFSNLPNLRYLDLSNNN 60 (61)
T ss_dssp TESEEEETSSTESEECTTTTTTGTTESEEEETSSSESEEETTTTTTSTTESEEEETSSS
T ss_pred cCcEEECCCCCCCccCHHHHcCCCCCCEeEccCCccCccCHHHHcCCCCCCEEeCcCCc
Confidence 45555555555554444455555555555555555555555555555555555555554
No 382
>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5. Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the
Probab=98.89 E-value=3.6e-09 Score=106.68 Aligned_cols=103 Identities=20% Similarity=0.271 Sum_probs=81.1
Q ss_pred cCCCccCeeeccCcceEEEEE-cCCCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhcCCCCcccEEEEEEe----CCee
Q 044615 462 NNFDDGHCIGNGGQGSVYKAK-LPTGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKIRHRNIVKFYGFCSH----ALHS 536 (571)
Q Consensus 462 ~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~----~~~~ 536 (571)
.+|+..+.||+|+||.||+|. ..+|..||+|++...... ....+.+.+|+.++++++||||+++++++.. ....
T Consensus 5 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~~-~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 83 (334)
T cd07855 5 SRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDV-PTLAKRTLRELKILRHFKHDNIIAIRDILRPPGADFKDV 83 (334)
T ss_pred hceeeeeeeecCCCeEEEEEEEcCCCCEEEEEEecccccc-ccchHHHHHHHHHHHhcCCCCccCHHHhccccCCCCceE
Confidence 578999999999999999999 557999999998754322 2235667889999999999999999998763 3568
Q ss_pred EEEEeccCCCChhhhhccCCCccCCCHHHHhhh
Q 044615 537 FVVYEYLEMGSLAMNLSNDAAAEQFCWTKRMNA 569 (571)
Q Consensus 537 ~lv~e~~~~G~L~~~l~~~~~~~~l~w~~r~~i 569 (571)
|+||||+. |+|.+++.... .+++.....+
T Consensus 84 ~lv~e~~~-~~l~~~~~~~~---~~~~~~~~~i 112 (334)
T cd07855 84 YVVMDLME-SDLHHIIHSDQ---PLTEEHIRYF 112 (334)
T ss_pred EEEEehhh-hhHHHHhccCC---CCCHHHHHHH
Confidence 99999996 68999887432 3566555544
No 383
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=98.89 E-value=6.5e-09 Score=105.79 Aligned_cols=92 Identities=20% Similarity=0.349 Sum_probs=74.7
Q ss_pred HccCCCccCeeeccCcceEEEEE-cCCCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhcCCCCcccEEEEEEeC-----
Q 044615 460 ATNNFDDGHCIGNGGQGSVYKAK-LPTGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKIRHRNIVKFYGFCSHA----- 533 (571)
Q Consensus 460 ~~~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~----- 533 (571)
..++|+..+.||+|+||.||+|. ..+++.||||.+...... ....+.+.+|+.+++.++||||+++++++...
T Consensus 15 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 93 (355)
T cd07874 15 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQN-QTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKSLEE 93 (355)
T ss_pred hhhceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCcccC-hHHHHHHHHHHHHHHHhCCCchhceeeeeeccccccc
Confidence 45679999999999999999998 457899999998754322 23356788999999999999999999998653
Q ss_pred -CeeEEEEeccCCCChhhhhc
Q 044615 534 -LHSFVVYEYLEMGSLAMNLS 553 (571)
Q Consensus 534 -~~~~lv~e~~~~G~L~~~l~ 553 (571)
...|+||||+++ ++.+.+.
T Consensus 94 ~~~~~lv~e~~~~-~l~~~~~ 113 (355)
T cd07874 94 FQDVYLVMELMDA-NLCQVIQ 113 (355)
T ss_pred cceeEEEhhhhcc-cHHHHHh
Confidence 357999999975 6776664
No 384
>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]
Probab=98.89 E-value=6.1e-10 Score=108.08 Aligned_cols=95 Identities=26% Similarity=0.285 Sum_probs=76.9
Q ss_pred cCCCccCeeeccCcceEEEEE-cCCCCEEEEEEccCCCCCch----HhHHHHHHHHHHHhhcCCCCcccEEEEEEe-CCe
Q 044615 462 NNFDDGHCIGNGGQGSVYKAK-LPTGEIVDVKKFHSPLPDEM----ACQQEFLNEVNALTKIRHRNIVKFYGFCSH-ALH 535 (571)
Q Consensus 462 ~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~----~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~-~~~ 535 (571)
+.|-....+|+|||+.||+|. ....+.||||+-+..+.... ...+...+|.+|.+.++||.||++|++|.- .+.
T Consensus 463 ~RYLlLhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYDyfslDtds 542 (775)
T KOG1151|consen 463 DRYLLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYDYFSLDTDS 542 (775)
T ss_pred HHHHHHHHhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeeeeeeeeeecccc
Confidence 346677889999999999998 55678899998765443221 124557899999999999999999999964 567
Q ss_pred eEEEEeccCCCChhhhhccCC
Q 044615 536 SFVVYEYLEMGSLAMNLSNDA 556 (571)
Q Consensus 536 ~~lv~e~~~~G~L~~~l~~~~ 556 (571)
+|-|+|||+|.||..||+...
T Consensus 543 FCTVLEYceGNDLDFYLKQhk 563 (775)
T KOG1151|consen 543 FCTVLEYCEGNDLDFYLKQHK 563 (775)
T ss_pred ceeeeeecCCCchhHHHHhhh
Confidence 889999999999999998643
No 385
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=98.88 E-value=2.3e-10 Score=116.51 Aligned_cols=91 Identities=27% Similarity=0.417 Sum_probs=79.9
Q ss_pred HccCCCccCeeeccCcceEEEEE-cCCCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhcCCCCcccEEEEEEeCCeeEE
Q 044615 460 ATNNFDDGHCIGNGGQGSVYKAK-LPTGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKIRHRNIVKFYGFCSHALHSFV 538 (571)
Q Consensus 460 ~~~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~l 538 (571)
...+|+....+|+|.||.|||++ ..+++..|+|.++.....+ ..-..+||-+++.++|||||.++|.|...+..+|
T Consensus 13 P~ddyellqrvgsgTygdvyKaRd~~s~elaavkvVkLep~dd---~~~iqqei~~~~dc~h~nivay~gsylr~dklwi 89 (829)
T KOG0576|consen 13 PQDDYELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLEPGDD---FSGIQQEIGMLRDCRHPNIVAYFGSYLRRDKLWI 89 (829)
T ss_pred CccchhheeeecCCcccchhhhcccccCchhhheeeeccCCcc---ccccccceeeeecCCCcChHHHHhhhhhhcCcEE
Confidence 34578899999999999999999 5689999999998765444 3456789999999999999999999999999999
Q ss_pred EEeccCCCChhhhhc
Q 044615 539 VYEYLEMGSLAMNLS 553 (571)
Q Consensus 539 v~e~~~~G~L~~~l~ 553 (571)
.||||.+|+|.+.-+
T Consensus 90 cMEycgggslQdiy~ 104 (829)
T KOG0576|consen 90 CMEYCGGGSLQDIYH 104 (829)
T ss_pred EEEecCCCcccceee
Confidence 999999999988665
No 386
>PTZ00024 cyclin-dependent protein kinase; Provisional
Probab=98.88 E-value=7.7e-09 Score=104.31 Aligned_cols=92 Identities=23% Similarity=0.293 Sum_probs=73.8
Q ss_pred CCC-ccCeeeccCcceEEEEE-cCCCCEEEEEEccCCCCCchH-----------hHHHHHHHHHHHhhcCCCCcccEEEE
Q 044615 463 NFD-DGHCIGNGGQGSVYKAK-LPTGEIVDVKKFHSPLPDEMA-----------CQQEFLNEVNALTKIRHRNIVKFYGF 529 (571)
Q Consensus 463 ~~~-~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~-----------~~~~~~~Ei~~l~~l~H~niv~l~~~ 529 (571)
.|. ..+.||+|+||+||+|. ..+++.||||.+......... ....+.+|++++++++||||++++++
T Consensus 9 ry~~~~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~ 88 (335)
T PTZ00024 9 RYIQKGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIMGLVDV 88 (335)
T ss_pred chhhhhhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcceeeeeEE
Confidence 354 45679999999999999 457999999998653222100 11247899999999999999999999
Q ss_pred EEeCCeeEEEEeccCCCChhhhhccC
Q 044615 530 CSHALHSFVVYEYLEMGSLAMNLSND 555 (571)
Q Consensus 530 ~~~~~~~~lv~e~~~~G~L~~~l~~~ 555 (571)
+...+..++||||++ |+|.+++...
T Consensus 89 ~~~~~~~~lv~e~~~-~~l~~~l~~~ 113 (335)
T PTZ00024 89 YVEGDFINLVMDIMA-SDLKKVVDRK 113 (335)
T ss_pred EecCCcEEEEEeccc-cCHHHHHHhc
Confidence 999999999999997 6999998643
No 387
>smart00221 STYKc Protein kinase; unclassified specificity. Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.
Probab=98.87 E-value=1.5e-08 Score=95.53 Aligned_cols=102 Identities=32% Similarity=0.496 Sum_probs=83.4
Q ss_pred CCccCeeeccCcceEEEEEcC-CCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhcCCCCcccEEEEEEeCCeeEEEEec
Q 044615 464 FDDGHCIGNGGQGSVYKAKLP-TGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKIRHRNIVKFYGFCSHALHSFVVYEY 542 (571)
Q Consensus 464 ~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 542 (571)
|...+.||+|++|.||++... +++.+|+|.+...... ...+.+.+|++.+.+++|+|++++++++......++++||
T Consensus 1 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~--~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~ 78 (225)
T smart00221 1 YELGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTE--KQREEFLREIRILKKLKHPNIVKLYGVFEDPEPLYLVMEY 78 (225)
T ss_pred CceeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccch--HHHHHHHHHHHHHHhCCCCChhhheeeeecCCceEEEEec
Confidence 456788999999999999954 5899999999765433 2457899999999999999999999999998999999999
Q ss_pred cCCCChhhhhccCCCccCCCHHHHhhh
Q 044615 543 LEMGSLAMNLSNDAAAEQFCWTKRMNA 569 (571)
Q Consensus 543 ~~~G~L~~~l~~~~~~~~l~w~~r~~i 569 (571)
+++++|.+++...... ++|.....+
T Consensus 79 ~~~~~L~~~~~~~~~~--~~~~~~~~~ 103 (225)
T smart00221 79 CEGGDLFDYLRKKGGK--LSEEEARFY 103 (225)
T ss_pred cCCCCHHHHHHhcccC--CCHHHHHHH
Confidence 9999999999754321 555554443
No 388
>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They
Probab=98.86 E-value=7.7e-09 Score=101.48 Aligned_cols=103 Identities=25% Similarity=0.389 Sum_probs=84.1
Q ss_pred CCccCeeeccCcceEEEEEc-CCCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhcCCCCcccEEEEEEeCCeeEEEEec
Q 044615 464 FDDGHCIGNGGQGSVYKAKL-PTGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKIRHRNIVKFYGFCSHALHSFVVYEY 542 (571)
Q Consensus 464 ~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 542 (571)
|+..+.||+|++|.||+|.. .+++.+|+|.+...... ......+.+|++++++++||||+++++++..++..++||||
T Consensus 1 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~ 79 (283)
T cd05118 1 YQKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFES-EGIPKTALREIKLLKELNHPNIIKLLDVFRHKGDLYLVFEF 79 (283)
T ss_pred CccceeeecCCCceEEEEEcCCCCcEEEEEEecccccc-chhHHHHHHHHHHHHHhcCCCcchHHHhhccCCCEEEEEec
Confidence 56678899999999999994 57899999998754332 23356788999999999999999999999999999999999
Q ss_pred cCCCChhhhhccCCCccCCCHHHHhhhc
Q 044615 543 LEMGSLAMNLSNDAAAEQFCWTKRMNAI 570 (571)
Q Consensus 543 ~~~G~L~~~l~~~~~~~~l~w~~r~~ia 570 (571)
+++ ++.+++.... ..++|..+..++
T Consensus 80 ~~~-~l~~~l~~~~--~~~~~~~~~~~~ 104 (283)
T cd05118 80 MDT-DLYKLIKDRQ--RGLPESLIKSYL 104 (283)
T ss_pred cCC-CHHHHHHhhc--ccCCHHHHHHHH
Confidence 985 8988887543 357777766654
No 389
>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and
Probab=98.86 E-value=5.5e-09 Score=105.13 Aligned_cols=103 Identities=21% Similarity=0.307 Sum_probs=83.6
Q ss_pred CCCccCeeeccCcceEEEEEc-CCCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhcCCCCcccEEEEEEeCC-----ee
Q 044615 463 NFDDGHCIGNGGQGSVYKAKL-PTGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKIRHRNIVKFYGFCSHAL-----HS 536 (571)
Q Consensus 463 ~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~-----~~ 536 (571)
+|++.+.||+|+||.||+|.. .++..||+|++..... .....+.+.+|+++++.++||||+++++++.... ..
T Consensus 1 ~y~i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~-~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~ 79 (330)
T cd07834 1 RYELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFD-DLIDAKRILREIKLLRHLRHENIIGLLDILRPPSPEDFNDV 79 (330)
T ss_pred CceeeeeecCCCCeEEEEEEeCCCCcEEEEEeeccccc-cchhhhhHHHHHHHHHhcCCcchhhhhhhhcccCcccccce
Confidence 478889999999999999994 4689999999875432 1233567899999999999999999999998775 78
Q ss_pred EEEEeccCCCChhhhhccCCCccCCCHHHHhhhc
Q 044615 537 FVVYEYLEMGSLAMNLSNDAAAEQFCWTKRMNAI 570 (571)
Q Consensus 537 ~lv~e~~~~G~L~~~l~~~~~~~~l~w~~r~~ia 570 (571)
|+||||++ ++|.+++.+.. .++|.....|+
T Consensus 80 ~lv~e~~~-~~l~~~l~~~~---~l~~~~~~~i~ 109 (330)
T cd07834 80 YIVTELME-TDLHKVIKSPQ---PLTDDHIQYFL 109 (330)
T ss_pred EEEecchh-hhHHHHHhCCC---CCCHHHHHHHH
Confidence 99999998 48999887543 57777666554
No 390
>PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A ....
Probab=98.85 E-value=2.1e-09 Score=78.39 Aligned_cols=61 Identities=46% Similarity=0.580 Sum_probs=53.7
Q ss_pred CCCCEEEcccCcCcccccccccCCCCCCeeecccCcCcccCCccccCCCCCCEEEccCCCC
Q 044615 121 TNLVVLDLSTNKLSGSIPLSFANLTSLSILYLYENSLCDSIPKEIGNMNSLSILDLSSNKL 181 (571)
Q Consensus 121 ~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l 181 (571)
++|++|++++|+++...+..|.++++|++|++++|.+....|+.|.++++|++|++++|++
T Consensus 1 p~L~~L~l~~n~l~~i~~~~f~~l~~L~~L~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~l 61 (61)
T PF13855_consen 1 PNLESLDLSNNKLTEIPPDSFSNLPNLETLDLSNNNLTSIPPDAFSNLPNLRYLDLSNNNL 61 (61)
T ss_dssp TTESEEEETSSTESEECTTTTTTGTTESEEEETSSSESEEETTTTTTSTTESEEEETSSSB
T ss_pred CcCcEEECCCCCCCccCHHHHcCCCCCCEeEccCCccCccCHHHHcCCCCCCEEeCcCCcC
Confidence 4788999999999877778899999999999999999887788899999999999998874
No 391
>KOG4658 consensus Apoptotic ATPase [Signal transduction mechanisms]
Probab=98.85 E-value=4.9e-09 Score=115.98 Aligned_cols=103 Identities=33% Similarity=0.328 Sum_probs=44.9
Q ss_pred CCCEEEcccCc--CcccccccccCCCCCCeeecccCcCcccCCccccCCCCCCEEEccCCCCCccCChhhhhccCCCcEE
Q 044615 122 NLVVLDLSTNK--LSGSIPLSFANLTSLSILYLYENSLCDSIPKEIGNMNSLSILDLSSNKLNGSIPLSLANLTNSLKVL 199 (571)
Q Consensus 122 ~L~~L~L~~n~--i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~~L~~L 199 (571)
+|++|-+.+|. +....+..|..++.|+.|||++|.-.+.+|+.+++|-+|++|++++..+. .+|.++.++.. |.+|
T Consensus 546 ~L~tLll~~n~~~l~~is~~ff~~m~~LrVLDLs~~~~l~~LP~~I~~Li~LryL~L~~t~I~-~LP~~l~~Lk~-L~~L 623 (889)
T KOG4658|consen 546 KLRTLLLQRNSDWLLEISGEFFRSLPLLRVLDLSGNSSLSKLPSSIGELVHLRYLDLSDTGIS-HLPSGLGNLKK-LIYL 623 (889)
T ss_pred ccceEEEeecchhhhhcCHHHHhhCcceEEEECCCCCccCcCChHHhhhhhhhcccccCCCcc-ccchHHHHHHh-hhee
Confidence 34444444443 22222233444444444444444444444444444444444444444444 44444444443 4444
Q ss_pred EccCCcccccCCccccCCCCCcEEeCc
Q 044615 200 YLSSNHIVGEIPLGHGMLSSLIQLTLN 226 (571)
Q Consensus 200 ~l~~n~~~~~~~~~~~~l~~L~~L~l~ 226 (571)
++..+.....+|.....+++|++|.+.
T Consensus 624 nl~~~~~l~~~~~i~~~L~~Lr~L~l~ 650 (889)
T KOG4658|consen 624 NLEVTGRLESIPGILLELQSLRVLRLP 650 (889)
T ss_pred ccccccccccccchhhhcccccEEEee
Confidence 444443332333333334444444443
No 392
>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK
Probab=98.85 E-value=1.4e-08 Score=103.31 Aligned_cols=93 Identities=22% Similarity=0.385 Sum_probs=75.4
Q ss_pred HccCCCccCeeeccCcceEEEEE-cCCCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhcCCCCcccEEEEEEeC-----
Q 044615 460 ATNNFDDGHCIGNGGQGSVYKAK-LPTGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKIRHRNIVKFYGFCSHA----- 533 (571)
Q Consensus 460 ~~~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~----- 533 (571)
..+.|+..+.||+|+||.||+|. ..+++.||+|.+..... .....+.+.+|+.++++++||||+++++++...
T Consensus 14 ~~~~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 92 (353)
T cd07850 14 VLKRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQ-NVTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQKSLEE 92 (353)
T ss_pred hhcceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCcccc-ChhHHHHHHHHHHHHHhcCCCCCcceeeeeccCCCccc
Confidence 34679999999999999999999 55899999999865332 223346678999999999999999999998644
Q ss_pred -CeeEEEEeccCCCChhhhhcc
Q 044615 534 -LHSFVVYEYLEMGSLAMNLSN 554 (571)
Q Consensus 534 -~~~~lv~e~~~~G~L~~~l~~ 554 (571)
...|+||||+. |+|.+.+..
T Consensus 93 ~~~~~lv~e~~~-~~l~~~~~~ 113 (353)
T cd07850 93 FQDVYLVMELMD-ANLCQVIQM 113 (353)
T ss_pred cCcEEEEEeccC-CCHHHHHhh
Confidence 35799999996 588888763
No 393
>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]
Probab=98.85 E-value=4.6e-09 Score=107.64 Aligned_cols=90 Identities=28% Similarity=0.371 Sum_probs=77.2
Q ss_pred CCCccCeeeccCcceEEEEE-cCCCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhcC-C-----CCcccEEEEEEeCCe
Q 044615 463 NFDDGHCIGNGGQGSVYKAK-LPTGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKIR-H-----RNIVKFYGFCSHALH 535 (571)
Q Consensus 463 ~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~-H-----~niv~l~~~~~~~~~ 535 (571)
.|++.+.||+|+||+|.+|. .++++.||||+++... ....+-..|+++|..++ | -|+|+++++|...++
T Consensus 187 rY~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~k----~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~fr~H 262 (586)
T KOG0667|consen 187 RYEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNKK----RFLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYFRNH 262 (586)
T ss_pred EEEEEEEecccccceeEEEEecCCCcEEEEEeeccCh----HHHHHHHHHHHHHHHHhccCCCCCeeEEEeeeccccccc
Confidence 68999999999999999999 7789999999997543 22455678999999987 4 389999999999999
Q ss_pred eEEEEeccCCCChhhhhccCCC
Q 044615 536 SFVVYEYLEMGSLAMNLSNDAA 557 (571)
Q Consensus 536 ~~lv~e~~~~G~L~~~l~~~~~ 557 (571)
.|||+|.+.. +|+++|+....
T Consensus 263 lciVfELL~~-NLYellK~n~f 283 (586)
T KOG0667|consen 263 LCIVFELLST-NLYELLKNNKF 283 (586)
T ss_pred eeeeehhhhh-hHHHHHHhcCC
Confidence 9999999876 99999996543
No 394
>PRK10345 hypothetical protein; Provisional
Probab=98.85 E-value=1.2e-08 Score=94.17 Aligned_cols=87 Identities=13% Similarity=0.186 Sum_probs=67.2
Q ss_pred CCccCeeeccCcceEEEEEcCCCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhc-----CCCCcccEEEEEEeCC---e
Q 044615 464 FDDGHCIGNGGQGSVYKAKLPTGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKI-----RHRNIVKFYGFCSHAL---H 535 (571)
Q Consensus 464 ~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l-----~H~niv~l~~~~~~~~---~ 535 (571)
+.....||+|+||.||. ...++.. +||++...... ..+.+.+|+++++++ +||||++++|++++.. .
T Consensus 4 L~~~~~LG~G~~~~Vy~-hp~~~~k-~IKv~~~~~~~---~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~g~ 78 (210)
T PRK10345 4 LSEQSPLGTGRHRKCYA-HPEDAQR-CIKIVYHRGDG---GDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGTGY 78 (210)
T ss_pred cCCcceecCCCceEEEE-CCCCcCe-EEEEEeccccc---hHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCCeE
Confidence 34467899999999995 3334444 79998754322 346799999999999 6799999999999873 4
Q ss_pred eE-EEEec--cCCCChhhhhccC
Q 044615 536 SF-VVYEY--LEMGSLAMNLSND 555 (571)
Q Consensus 536 ~~-lv~e~--~~~G~L~~~l~~~ 555 (571)
.+ +|+|| +++|+|.+++.+.
T Consensus 79 v~~~I~e~~G~~~~tL~~~l~~~ 101 (210)
T PRK10345 79 VYDVIADFDGKPSITLTEFAEQC 101 (210)
T ss_pred EEEEEecCCCCcchhHHHHHHcc
Confidence 34 78999 6689999999753
No 395
>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both
Probab=98.85 E-value=1.4e-08 Score=99.93 Aligned_cols=104 Identities=29% Similarity=0.433 Sum_probs=80.9
Q ss_pred CCccCeeeccCcceEEEEEcC-CCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhc---CCCCcccEEEEEEeCCe----
Q 044615 464 FDDGHCIGNGGQGSVYKAKLP-TGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKI---RHRNIVKFYGFCSHALH---- 535 (571)
Q Consensus 464 ~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l---~H~niv~l~~~~~~~~~---- 535 (571)
|++.+.||+|+||.||+|..+ ++..||+|.+....... .....+.+|+.++.++ +|||++++++++.+.+.
T Consensus 1 y~~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~-~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~ 79 (287)
T cd07838 1 YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEE-GIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDREL 79 (287)
T ss_pred CeEEEEecccCceEEEEEEECCCCCEEEEEEeccccccc-hhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCCc
Confidence 567789999999999999954 68999999997543322 2235577888777665 69999999999988776
Q ss_pred -eEEEEeccCCCChhhhhccCCCccCCCHHHHhhhc
Q 044615 536 -SFVVYEYLEMGSLAMNLSNDAAAEQFCWTKRMNAI 570 (571)
Q Consensus 536 -~~lv~e~~~~G~L~~~l~~~~~~~~l~w~~r~~ia 570 (571)
.+++|||+++ +|.+++..... ..++|.....++
T Consensus 80 ~~~l~~e~~~~-~l~~~l~~~~~-~~l~~~~~~~~~ 113 (287)
T cd07838 80 KLTLVFEHVDQ-DLATYLSKCPK-PGLPPETIKDLM 113 (287)
T ss_pred eeEEEehhccc-CHHHHHHHccC-CCCCHHHHHHHH
Confidence 9999999984 89998875432 357888777664
No 396
>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati
Probab=98.85 E-value=8e-09 Score=104.29 Aligned_cols=103 Identities=20% Similarity=0.289 Sum_probs=80.0
Q ss_pred cCCCccCeeeccCcceEEEEE-cCCCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhcCCCCcccEEEEEEeC-----Ce
Q 044615 462 NNFDDGHCIGNGGQGSVYKAK-LPTGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKIRHRNIVKFYGFCSHA-----LH 535 (571)
Q Consensus 462 ~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~-----~~ 535 (571)
..|.+.+.||+|+||.||+|. ..++..||||.+...... ......+.+|+.+++.++||||+++++++... ..
T Consensus 5 ~~y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~~~~~~ 83 (337)
T cd07858 5 TKYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDN-RIDAKRTLREIKLLRHLDHENVIAIKDIMPPPHREAFND 83 (337)
T ss_pred cceeEEEEeccCCCeEEEEEEecCCCCeEEEEEecccccc-cchhHHHHHHHHHHHhcCCCCccchHHheecccccccCc
Confidence 468889999999999999998 568999999998754222 22345677899999999999999999988654 34
Q ss_pred eEEEEeccCCCChhhhhccCCCccCCCHHHHhhh
Q 044615 536 SFVVYEYLEMGSLAMNLSNDAAAEQFCWTKRMNA 569 (571)
Q Consensus 536 ~~lv~e~~~~G~L~~~l~~~~~~~~l~w~~r~~i 569 (571)
.|+||||+. ++|.+++...+ .+++.....|
T Consensus 84 ~~lv~e~~~-~~L~~~~~~~~---~l~~~~~~~i 113 (337)
T cd07858 84 VYIVYELMD-TDLHQIIRSSQ---TLSDDHCQYF 113 (337)
T ss_pred EEEEEeCCC-CCHHHHHhcCC---CCCHHHHHHH
Confidence 799999996 68998886432 3555554444
No 397
>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as
Probab=98.83 E-value=2.3e-08 Score=100.03 Aligned_cols=97 Identities=19% Similarity=0.248 Sum_probs=73.0
Q ss_pred cCeeeccCcceEEEEEcC---CCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhcCCCCcccEEEEEEe--CCeeEEEEe
Q 044615 467 GHCIGNGGQGSVYKAKLP---TGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKIRHRNIVKFYGFCSH--ALHSFVVYE 541 (571)
Q Consensus 467 ~~~lg~G~~g~V~~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~--~~~~~lv~e 541 (571)
+..||+|+||.||+|..+ ++..||+|.+..... ...+.+|++++++++||||+++++++.. ....|+|||
T Consensus 6 g~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~~-----~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e 80 (317)
T cd07867 6 GCKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTGI-----SMSACREIALLRELKHPNVIALQKVFLSHSDRKVWLLFD 80 (317)
T ss_pred ceEeccCCCeeEEEEEecCCCccceEEEEEecCCCC-----cHHHHHHHHHHHhCCCCCeeeEEEEEeccCCCeEEEEEe
Confidence 367999999999999843 457899999865421 2457799999999999999999999854 467899999
Q ss_pred ccCCCChhhhhccCC------CccCCCHHHHhhh
Q 044615 542 YLEMGSLAMNLSNDA------AAEQFCWTKRMNA 569 (571)
Q Consensus 542 ~~~~G~L~~~l~~~~------~~~~l~w~~r~~i 569 (571)
|+++ +|.+++.... ....++|.....|
T Consensus 81 ~~~~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i 113 (317)
T cd07867 81 YAEH-DLWHIIKFHRASKANKKPMQLPRSMVKSL 113 (317)
T ss_pred eeCC-cHHHHHHhhhccccCCCCccCCHHHHHHH
Confidence 9875 7888775321 1224666655544
No 398
>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase
Probab=98.83 E-value=1.3e-08 Score=102.76 Aligned_cols=101 Identities=23% Similarity=0.311 Sum_probs=79.0
Q ss_pred ccCCCccCeeeccCcceEEEEE-cCCCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhcCCCCcccEEEEEEeC-----C
Q 044615 461 TNNFDDGHCIGNGGQGSVYKAK-LPTGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKIRHRNIVKFYGFCSHA-----L 534 (571)
Q Consensus 461 ~~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~-----~ 534 (571)
.++|++.+.||+|+||.||+|. ..+|+.||+|.+..... ......+.+|+.++++++||||+++++++... .
T Consensus 4 ~~~y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 81 (336)
T cd07849 4 GPRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFEH--QTFCQRTLREIKILRRFKHENIIGILDIIRPPSFESFN 81 (336)
T ss_pred ccceEEEEEEEecCCeEEEEEEEcCCCCeEEEEEeccccc--chhHHHHHHHHHHHHhCCCCCcCchhheeecccccccc
Confidence 4679999999999999999998 56899999999864321 22346688999999999999999999987654 3
Q ss_pred eeEEEEeccCCCChhhhhccCCCccCCCHHHHhh
Q 044615 535 HSFVVYEYLEMGSLAMNLSNDAAAEQFCWTKRMN 568 (571)
Q Consensus 535 ~~~lv~e~~~~G~L~~~l~~~~~~~~l~w~~r~~ 568 (571)
..|+||||+++ ++.+++... .+++.....
T Consensus 82 ~~~lv~e~~~~-~l~~~~~~~----~l~~~~~~~ 110 (336)
T cd07849 82 DVYIVQELMET-DLYKLIKTQ----HLSNDHIQY 110 (336)
T ss_pred eEEEEehhccc-CHHHHHhcC----CCCHHHHHH
Confidence 57999999974 888877643 355554443
No 399
>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=98.83 E-value=3.2e-10 Score=114.53 Aligned_cols=88 Identities=20% Similarity=0.273 Sum_probs=74.4
Q ss_pred CCCccCeeeccCcceEEEEEcC-CCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhcCCCCcccEEEEEEeCCeeEEEEe
Q 044615 463 NFDDGHCIGNGGQGSVYKAKLP-TGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKIRHRNIVKFYGFCSHALHSFVVYE 541 (571)
Q Consensus 463 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~e 541 (571)
-|+++..+|.|+||+||+|..+ ++...|.|+|.... ....++|+-||+||+.++||+||++++.|...+.+||+.|
T Consensus 33 ~WeIiGELGDGAFGKVyKA~nket~~lAAaKvIetks---eEELEDylVEIeILa~CdHP~ivkLl~ayy~enkLwiliE 109 (1187)
T KOG0579|consen 33 HWEIIGELGDGAFGKVYKAVNKETKLLAAAKVIETKS---EEELEDYLVEIEILAECDHPVIVKLLSAYYFENKLWILIE 109 (1187)
T ss_pred HHHHHhhhcCccchhhhhhhcccchhhhhhhhhcccc---hhHHhhhhhhhhhhhcCCChHHHHHHHHHhccCceEEEEe
Confidence 3566778999999999999944 56667889986432 3447889999999999999999999999999999999999
Q ss_pred ccCCCChhhhhc
Q 044615 542 YLEMGSLAMNLS 553 (571)
Q Consensus 542 ~~~~G~L~~~l~ 553 (571)
||.||-....+-
T Consensus 110 FC~GGAVDaiml 121 (1187)
T KOG0579|consen 110 FCGGGAVDAIML 121 (1187)
T ss_pred ecCCchHhHHHH
Confidence 999999876654
No 400
>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p
Probab=98.82 E-value=2.1e-08 Score=100.25 Aligned_cols=82 Identities=21% Similarity=0.315 Sum_probs=66.7
Q ss_pred cCeeeccCcceEEEEEcC---CCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhcCCCCcccEEEEEEe--CCeeEEEEe
Q 044615 467 GHCIGNGGQGSVYKAKLP---TGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKIRHRNIVKFYGFCSH--ALHSFVVYE 541 (571)
Q Consensus 467 ~~~lg~G~~g~V~~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~--~~~~~lv~e 541 (571)
++.||+|+||.||+|+.+ +++.||+|.+..... ...+.+|++++++++||||+++++++.. ....|+|||
T Consensus 6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~~-----~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e 80 (317)
T cd07868 6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTGI-----SMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFD 80 (317)
T ss_pred ccccccCCCeEEEEEEEccCCCCceEEEEEECCCCC-----cHHHHHHHHHHHhcCCCCCcceeeeEecCCCcEEEEEEe
Confidence 468999999999999843 567899999865422 2456789999999999999999999864 456899999
Q ss_pred ccCCCChhhhhcc
Q 044615 542 YLEMGSLAMNLSN 554 (571)
Q Consensus 542 ~~~~G~L~~~l~~ 554 (571)
|+.+ +|.+++..
T Consensus 81 ~~~~-~l~~~~~~ 92 (317)
T cd07868 81 YAEH-DLWHIIKF 92 (317)
T ss_pred ccCC-CHHHHHHh
Confidence 9874 88888753
No 401
>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]
Probab=98.82 E-value=1.4e-09 Score=98.18 Aligned_cols=91 Identities=21% Similarity=0.307 Sum_probs=78.9
Q ss_pred cCCCccCeeeccCcceEEEEE-cCCCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhcCCCCcccEEEEEEeC-----Ce
Q 044615 462 NNFDDGHCIGNGGQGSVYKAK-LPTGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKIRHRNIVKFYGFCSHA-----LH 535 (571)
Q Consensus 462 ~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~-----~~ 535 (571)
+.|.+.+.+|+|||+.||.++ ..++..||+|++.... ....+..++||+..++++|||+++++++.... .+
T Consensus 21 ~Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~---~~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~D~~~~ 97 (302)
T KOG2345|consen 21 KRYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCHS---QEDIEEALREIDNHRKFNSPNVLRLVDHQLREEKDGKHE 97 (302)
T ss_pred ceEEEeeeecCCCceeeeeecccCcccchhhheeeccc---hHHHHHHHHHHHHHHhhCCcchHHHHHHHHHhhccCcee
Confidence 458999999999999999999 7789999999997654 24467889999999999999999999887543 35
Q ss_pred eEEEEeccCCCChhhhhccC
Q 044615 536 SFVVYEYLEMGSLAMNLSND 555 (571)
Q Consensus 536 ~~lv~e~~~~G~L~~~l~~~ 555 (571)
.||++.|...|+|.+.+...
T Consensus 98 ~yll~Pyy~~Gsl~d~i~~~ 117 (302)
T KOG2345|consen 98 AYLLLPYYKRGSLLDEIERL 117 (302)
T ss_pred EEEEeehhccccHHHHHHHH
Confidence 89999999999999999753
No 402
>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7. Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it
Probab=98.82 E-value=1.5e-08 Score=100.18 Aligned_cols=105 Identities=22% Similarity=0.296 Sum_probs=81.7
Q ss_pred ccCCCccCeeeccCcceEEEEEcC-CCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhc-CCCCcccEEEEEEeCCeeEE
Q 044615 461 TNNFDDGHCIGNGGQGSVYKAKLP-TGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKI-RHRNIVKFYGFCSHALHSFV 538 (571)
Q Consensus 461 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l-~H~niv~l~~~~~~~~~~~l 538 (571)
.++|+..+.||+|+||.||+|... +++.||||.+...... ....++.+|+.++.+. .||||+++++++.+....|+
T Consensus 14 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~--~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 91 (296)
T cd06618 14 LNDLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNK--EENKRILMDLDVVLKSHDCPYIVKCYGYFITDSDVFI 91 (296)
T ss_pred cchheeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccCCh--HHHHHHHHHHHHHHhccCCCchHhhheeeecCCeEEE
Confidence 356888999999999999999954 5899999999754322 2245677788777666 49999999999999999999
Q ss_pred EEeccCCCChhhhhccCCCccCCCHHHHhhhc
Q 044615 539 VYEYLEMGSLAMNLSNDAAAEQFCWTKRMNAI 570 (571)
Q Consensus 539 v~e~~~~G~L~~~l~~~~~~~~l~w~~r~~ia 570 (571)
||||++ +++.+.+..... .++|..+..|+
T Consensus 92 v~e~~~-~~l~~l~~~~~~--~l~~~~~~~i~ 120 (296)
T cd06618 92 CMELMS-TCLDKLLKRIQG--PIPEDILGKMT 120 (296)
T ss_pred EeeccC-cCHHHHHHHhcC--CCCHHHHHHHH
Confidence 999986 477776654322 67888776664
No 403
>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4. Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates
Probab=98.82 E-value=1.1e-08 Score=100.73 Aligned_cols=86 Identities=28% Similarity=0.443 Sum_probs=70.7
Q ss_pred CCCccCeeeccCcceEEEEE-cCCCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhcC-CCCcccEEEEEEeCCeeEEEE
Q 044615 463 NFDDGHCIGNGGQGSVYKAK-LPTGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKIR-HRNIVKFYGFCSHALHSFVVY 540 (571)
Q Consensus 463 ~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~-H~niv~l~~~~~~~~~~~lv~ 540 (571)
+|+..+.||+|+||.||++. ..+++.||+|.+...... .....+.+|+.++.++. ||||+++++++......+++|
T Consensus 5 ~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~--~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~~~~~~~~ 82 (288)
T cd06616 5 DLKDLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDE--KEQKRLLMDLDVVMRSSDCPYIVKFYGALFREGDCWICM 82 (288)
T ss_pred HhHHHHHhCCCCceEEEEEEECCCCCEEEEEEehhccCh--HHHHHHHHHHHHHHHhcCCCCEeeeeeEEecCCcEEEEE
Confidence 45566789999999999998 557899999998754332 34567899999999996 999999999999999999999
Q ss_pred eccCCCChhhh
Q 044615 541 EYLEMGSLAMN 551 (571)
Q Consensus 541 e~~~~G~L~~~ 551 (571)
||++. ++.++
T Consensus 83 e~~~~-~l~~l 92 (288)
T cd06616 83 ELMDI-SLDKF 92 (288)
T ss_pred ecccC-CHHHH
Confidence 99874 55443
No 404
>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein. Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc
Probab=98.81 E-value=1.2e-08 Score=101.84 Aligned_cols=100 Identities=19% Similarity=0.111 Sum_probs=74.1
Q ss_pred ccCeeeccCcceEEEEEcCCCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhcCCCCcccEEEEEEeCCeeEEEEeccCC
Q 044615 466 DGHCIGNGGQGSVYKAKLPTGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKIRHRNIVKFYGFCSHALHSFVVYEYLEM 545 (571)
Q Consensus 466 ~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~ 545 (571)
+++.+|.|+++.||++.. +++.||||++..... .....+.+.+|++++++++||||+++++++.+.+..|++|||+++
T Consensus 6 i~~~~~~~~~v~~~~~~~-~~~~~avK~~~~~~~-~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~e~~~~ 83 (314)
T cd08216 6 IGKCFEDLMIVHLAKHKP-TNTLVAVKKINLDSC-SKEDLKLLQQEIITSRQLQHPNILPYVTSFIVDSELYVVSPLMAY 83 (314)
T ss_pred hhHhhcCCceEEEEEecC-CCCEEEEEEEecccc-chhHHHHHHHHHHHHHhcCCcchhhhhheeecCCeEEEEEeccCC
Confidence 334445555544444444 799999999976422 223457799999999999999999999999999999999999999
Q ss_pred CChhhhhccCCCccCCCHHHHhh
Q 044615 546 GSLAMNLSNDAAAEQFCWTKRMN 568 (571)
Q Consensus 546 G~L~~~l~~~~~~~~l~w~~r~~ 568 (571)
|+|.+++..... ..+++.....
T Consensus 84 ~~l~~~l~~~~~-~~~~~~~~~~ 105 (314)
T cd08216 84 GSCEDLLKTHFP-EGLPELAIAF 105 (314)
T ss_pred CCHHHHHHHhcc-cCCCHHHHHH
Confidence 999999975422 2344444433
No 405
>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]
Probab=98.81 E-value=1.1e-09 Score=101.80 Aligned_cols=93 Identities=19% Similarity=0.288 Sum_probs=75.8
Q ss_pred HccCCCccCeeeccCcceEEEEE-cC--C--CCEEEEEEccCCCCCchHhHHHHHHHHHHHhhcCCCCcccEEEEEEe-C
Q 044615 460 ATNNFDDGHCIGNGGQGSVYKAK-LP--T--GEIVDVKKFHSPLPDEMACQQEFLNEVNALTKIRHRNIVKFYGFCSH-A 533 (571)
Q Consensus 460 ~~~~~~~~~~lg~G~~g~V~~~~-~~--~--~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~-~ 533 (571)
....|+....||+|.||.||+|. .+ + ...+|+|+++..+.+. +......|||.+++.++|||+|.+..++.+ .
T Consensus 22 ~l~~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~t-GiS~SAcREiaL~REl~h~nvi~Lv~Vfl~~d 100 (438)
T KOG0666|consen 22 DLFEYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGT-GISMSACREIALLRELKHPNVISLVKVFLSHD 100 (438)
T ss_pred HHHHhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCCCC-CcCHHHHHHHHHHHHhcCCcchhHHHHHhccC
Confidence 34568999999999999999996 32 2 2378999998654332 334567799999999999999999999987 6
Q ss_pred CeeEEEEeccCCCChhhhhcc
Q 044615 534 LHSFVVYEYLEMGSLAMNLSN 554 (571)
Q Consensus 534 ~~~~lv~e~~~~G~L~~~l~~ 554 (571)
..+++++||++. ||...|+-
T Consensus 101 ~~v~l~fdYAEh-DL~~II~f 120 (438)
T KOG0666|consen 101 KKVWLLFDYAEH-DLWHIIKF 120 (438)
T ss_pred ceEEEEehhhhh-hHHHHHHH
Confidence 789999999997 89888874
No 406
>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=98.81 E-value=7.1e-10 Score=120.99 Aligned_cols=96 Identities=33% Similarity=0.519 Sum_probs=83.4
Q ss_pred HHccCCCccCeeeccCcceEEEEE-cCCCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhcCCCCcccEEEEEEeCCeeE
Q 044615 459 RATNNFDDGHCIGNGGQGSVYKAK-LPTGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKIRHRNIVKFYGFCSHALHSF 537 (571)
Q Consensus 459 ~~~~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~ 537 (571)
..+-.++.+.+||.|.||.||-|. ..+|+..|||.+...... .+....+.+|..++..++|||+|+++|+-.+.+..+
T Consensus 1232 nV~~rWqrg~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~-~k~~~~i~eEm~vlE~lnHpNlV~YyGVEvHRekv~ 1310 (1509)
T KOG4645|consen 1232 NVTFRWQRGNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSD-HKTFKLIAEEMKVLEGLNHPNLVRYYGVEVHREKVY 1310 (1509)
T ss_pred cceeeeccccccCCcceeeeEEeecCCccchhhhhhhhcCccc-cccCcchHHHHHHHHhccCccccccCceeecHHHHH
Confidence 345678888999999999999998 778999999998754333 344567889999999999999999999999999999
Q ss_pred EEEeccCCCChhhhhccC
Q 044615 538 VVYEYLEMGSLAMNLSND 555 (571)
Q Consensus 538 lv~e~~~~G~L~~~l~~~ 555 (571)
|.||||++|+|.+.+...
T Consensus 1311 IFMEyC~~GsLa~ll~~g 1328 (1509)
T KOG4645|consen 1311 IFMEYCEGGSLASLLEHG 1328 (1509)
T ss_pred HHHHHhccCcHHHHHHhc
Confidence 999999999999999754
No 407
>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=98.80 E-value=3.5e-09 Score=107.26 Aligned_cols=103 Identities=17% Similarity=0.153 Sum_probs=86.2
Q ss_pred cHHHHHHHcc---CCCccCeeeccCcceEEEEE-cCCCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhcCCCCcccEEE
Q 044615 453 VHEEIIRATN---NFDDGHCIGNGGQGSVYKAK-LPTGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKIRHRNIVKFYG 528 (571)
Q Consensus 453 ~~~~~~~~~~---~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~ 528 (571)
.+-.+.++.. -|..++.||-|+||+|..++ ..+...||+|.+.+...-.......+..|-.||...+.+.||+++.
T Consensus 617 nYiRLkRaKMdKSmFvkik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn~WVVrLyy 696 (1034)
T KOG0608|consen 617 NYIRLKRAKMDKSMFVKIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEADNEWVVRLYY 696 (1034)
T ss_pred hHHHHHHhhccccceEEEeeecccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCCcceEEEEE
Confidence 3445555543 47888999999999999998 5577789999998765544445667889999999999999999999
Q ss_pred EEEeCCeeEEEEeccCCCChhhhhccC
Q 044615 529 FCSHALHSFVVYEYLEMGSLAMNLSND 555 (571)
Q Consensus 529 ~~~~~~~~~lv~e~~~~G~L~~~l~~~ 555 (571)
.|.+.+.+|+||||++|||+-.+|.+-
T Consensus 697 SFQDkdnLYFVMdYIPGGDmMSLLIrm 723 (1034)
T KOG0608|consen 697 SFQDKDNLYFVMDYIPGGDMMSLLIRM 723 (1034)
T ss_pred EeccCCceEEEEeccCCccHHHHHHHh
Confidence 999999999999999999999888754
No 408
>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]
Probab=98.80 E-value=2.5e-09 Score=104.46 Aligned_cols=96 Identities=23% Similarity=0.267 Sum_probs=82.7
Q ss_pred cCCCccCeeeccCcceEEEEE-cCCCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhcCCCCcccEEEEEEeCCeeEEEE
Q 044615 462 NNFDDGHCIGNGGQGSVYKAK-LPTGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKIRHRNIVKFYGFCSHALHSFVVY 540 (571)
Q Consensus 462 ~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~ 540 (571)
+.|..-++||+||||.||-++ ..+|+.+|+|++.+......+.......|-.++.+++.|.||.+-.+|++.+.+++||
T Consensus 185 n~F~~~RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s~FiVslaYAfeTkd~LClVL 264 (591)
T KOG0986|consen 185 NTFRVYRVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVSSPFIVSLAYAFETKDALCLVL 264 (591)
T ss_pred cceeeeEEEecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhccCcEEEEeeeecCCCceEEEE
Confidence 457778899999999999998 5589999999997665444333455778999999999999999999999999999999
Q ss_pred eccCCCChhhhhccCCC
Q 044615 541 EYLEMGSLAMNLSNDAA 557 (571)
Q Consensus 541 e~~~~G~L~~~l~~~~~ 557 (571)
..|.||||..+|.+.+.
T Consensus 265 tlMNGGDLkfHiyn~g~ 281 (591)
T KOG0986|consen 265 TLMNGGDLKFHIYNHGN 281 (591)
T ss_pred EeecCCceeEEeeccCC
Confidence 99999999999987653
No 409
>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13
Probab=98.79 E-value=2.4e-08 Score=101.07 Aligned_cols=90 Identities=23% Similarity=0.423 Sum_probs=72.7
Q ss_pred ccCCCccCeeeccCcceEEEEE-cCCCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhcCCCCcccEEEEEEeCC-----
Q 044615 461 TNNFDDGHCIGNGGQGSVYKAK-LPTGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKIRHRNIVKFYGFCSHAL----- 534 (571)
Q Consensus 461 ~~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~----- 534 (571)
..+|...+.||+|+||.||+|. ..+|+.||||++.+.... ......+.+|++++++++||||+++++++....
T Consensus 14 ~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~ 92 (342)
T cd07879 14 PERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQS-EIFAKRAYRELTLLKHMQHENVIGLLDVFTSAVSGDEF 92 (342)
T ss_pred ccceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCcccc-ccchhHHHHHHHHHHhcCCCCccchhheecccccCCCC
Confidence 3679999999999999999999 457999999998754322 223456889999999999999999999987543
Q ss_pred -eeEEEEeccCCCChhhhh
Q 044615 535 -HSFVVYEYLEMGSLAMNL 552 (571)
Q Consensus 535 -~~~lv~e~~~~G~L~~~l 552 (571)
..|+|+||+.+ ++.++.
T Consensus 93 ~~~~lv~e~~~~-~l~~~~ 110 (342)
T cd07879 93 QDFYLVMPYMQT-DLQKIM 110 (342)
T ss_pred ceEEEEeccccc-CHHHHH
Confidence 46899999974 777655
No 410
>PLN03224 probable serine/threonine protein kinase; Provisional
Probab=98.79 E-value=1.5e-08 Score=105.97 Aligned_cols=95 Identities=15% Similarity=0.264 Sum_probs=69.2
Q ss_pred HccCCCccCeeeccCcceEEEEEc-----------------CCCCEEEEEEccCCCCCch-----------HhHHHHHHH
Q 044615 460 ATNNFDDGHCIGNGGQGSVYKAKL-----------------PTGEIVDVKKFHSPLPDEM-----------ACQQEFLNE 511 (571)
Q Consensus 460 ~~~~~~~~~~lg~G~~g~V~~~~~-----------------~~~~~vavK~~~~~~~~~~-----------~~~~~~~~E 511 (571)
..++|++.++||+|+||.||+|.. ..++.||||++........ ...+.+..|
T Consensus 143 ~~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~vE 222 (507)
T PLN03224 143 SSDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMVE 222 (507)
T ss_pred cccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhHHH
Confidence 467899999999999999999962 2356799999865322110 011234557
Q ss_pred HHHHhhcCCCCc-----ccEEEEEEe--------CCeeEEEEeccCCCChhhhhcc
Q 044615 512 VNALTKIRHRNI-----VKFYGFCSH--------ALHSFVVYEYLEMGSLAMNLSN 554 (571)
Q Consensus 512 i~~l~~l~H~ni-----v~l~~~~~~--------~~~~~lv~e~~~~G~L~~~l~~ 554 (571)
+..+.+++|.++ ++++++|.. .+..++||||+++|+|.++++.
T Consensus 223 ~~~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~ 278 (507)
T PLN03224 223 AYMCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDG 278 (507)
T ss_pred HHHHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhh
Confidence 777788877655 677777753 3568999999999999999975
No 411
>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK
Probab=98.79 E-value=1e-08 Score=103.73 Aligned_cols=105 Identities=17% Similarity=0.264 Sum_probs=82.4
Q ss_pred HccCCCccCeeeccCcceEEEEEc-CCCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhcCCCCcccEEEEEEeCCe---
Q 044615 460 ATNNFDDGHCIGNGGQGSVYKAKL-PTGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKIRHRNIVKFYGFCSHALH--- 535 (571)
Q Consensus 460 ~~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~--- 535 (571)
..++|+..+.||+|+||.||+|+. .++..||||++...... ....+.+.+|+.++++++|||++++++++...+.
T Consensus 13 ~~~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 91 (343)
T cd07851 13 VPDRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQS-AIHAKRTYRELRLLKHMDHENVIGLLDVFTPASSLED 91 (343)
T ss_pred ccCceEEEEEeccCCceEEEEEEECCCCcEEEEEecccccch-hhHHHHHHHHHHHHHhccCCCHHHHHHHhhccccccc
Confidence 345799999999999999999994 57889999998654222 2334668899999999999999999998876554
Q ss_pred ---eEEEEeccCCCChhhhhccCCCccCCCHHHHhhhc
Q 044615 536 ---SFVVYEYLEMGSLAMNLSNDAAAEQFCWTKRMNAI 570 (571)
Q Consensus 536 ---~~lv~e~~~~G~L~~~l~~~~~~~~l~w~~r~~ia 570 (571)
.|+|+||+ +++|.+++... .+++.....++
T Consensus 92 ~~~~~lv~e~~-~~~L~~~~~~~----~l~~~~~~~~~ 124 (343)
T cd07851 92 FQDVYLVTHLM-GADLNNIVKCQ----KLSDDHIQFLV 124 (343)
T ss_pred cccEEEEEecC-CCCHHHHHhcC----CCCHHHHHHHH
Confidence 89999998 57999988742 46666655543
No 412
>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi
Probab=98.78 E-value=1.1e-08 Score=103.42 Aligned_cols=89 Identities=29% Similarity=0.421 Sum_probs=74.0
Q ss_pred cCCCccCeeeccCcceEEEEE-cCCCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhcCCCCcccEEEEEEeC-------
Q 044615 462 NNFDDGHCIGNGGQGSVYKAK-LPTGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKIRHRNIVKFYGFCSHA------- 533 (571)
Q Consensus 462 ~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~------- 533 (571)
++|...+.||+|+||.||+|. ..++..||+|.+..... ...+.+.+|++++++++||||+++++++...
T Consensus 5 ~~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~---~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 81 (342)
T cd07854 5 SRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDP---QSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLTED 81 (342)
T ss_pred cceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCCC---chHHHHHHHHHHHHhcCCCcchhhHhhhcccccccccc
Confidence 568899999999999999998 56799999999865433 2346788999999999999999999876543
Q ss_pred -------CeeEEEEeccCCCChhhhhcc
Q 044615 534 -------LHSFVVYEYLEMGSLAMNLSN 554 (571)
Q Consensus 534 -------~~~~lv~e~~~~G~L~~~l~~ 554 (571)
...|+||||++ ++|.+++..
T Consensus 82 ~~~~~~~~~~~lv~e~~~-~~L~~~~~~ 108 (342)
T cd07854 82 VGSLTELNSVYIVQEYME-TDLANVLEQ 108 (342)
T ss_pred cccccccceEEEEeeccc-ccHHHHHHc
Confidence 35789999997 599888864
No 413
>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins. Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic
Probab=98.77 E-value=1.7e-08 Score=100.59 Aligned_cols=105 Identities=23% Similarity=0.352 Sum_probs=79.8
Q ss_pred ccCCCccCeeeccCcceEEEEE-cCCCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhcCCCCcccEEEEEEeCC-----
Q 044615 461 TNNFDDGHCIGNGGQGSVYKAK-LPTGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKIRHRNIVKFYGFCSHAL----- 534 (571)
Q Consensus 461 ~~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~----- 534 (571)
.++|++.+.||+|+||.||+|. ..+++.+|||++......+ .....+.+|++++++++||||+++++++.+..
T Consensus 7 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 85 (311)
T cd07866 7 LRDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKD-GFPITALREIKILKKLKHPNVVPLIDMAVERPDKSKR 85 (311)
T ss_pred cccEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCC-CcchhHHHHHHHHHhcCCCCccchhhheecccccccc
Confidence 4679999999999999999999 4578999999986543222 12345778999999999999999999875433
Q ss_pred ---eeEEEEeccCCCChhhhhccCCCccCCCHHHHhhh
Q 044615 535 ---HSFVVYEYLEMGSLAMNLSNDAAAEQFCWTKRMNA 569 (571)
Q Consensus 535 ---~~~lv~e~~~~G~L~~~l~~~~~~~~l~w~~r~~i 569 (571)
..|+||||+.+ ++...+.... ..+++.+...+
T Consensus 86 ~~~~~~lv~~~~~~-~l~~~~~~~~--~~~~~~~~~~i 120 (311)
T cd07866 86 KRGSVYMVTPYMDH-DLSGLLENPS--VKLTESQIKCY 120 (311)
T ss_pred cCceEEEEEecCCc-CHHHHHhccc--cCCCHHHHHHH
Confidence 46999999975 7777776432 24666665554
No 414
>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c
Probab=98.77 E-value=1.7e-08 Score=92.36 Aligned_cols=84 Identities=18% Similarity=0.189 Sum_probs=59.3
Q ss_pred cCeeeccCcceEEEEEcCCCCEEEEEEccCCCCCchHh-----------------------HHHHHHHHHHHhhcCCCCc
Q 044615 467 GHCIGNGGQGSVYKAKLPTGEIVDVKKFHSPLPDEMAC-----------------------QQEFLNEVNALTKIRHRNI 523 (571)
Q Consensus 467 ~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~-----------------------~~~~~~Ei~~l~~l~H~ni 523 (571)
...||+|+||.||+|..++|+.||||+++......... .....+|++.+.++.|+++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~v 81 (190)
T cd05147 2 NGCISTGKEANVYHATTANGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTAGI 81 (190)
T ss_pred CCccccccceEEEEEECCCCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHCCC
Confidence 36799999999999997789999999997643211000 1123459999999988887
Q ss_pred ccEEEEEEeCCeeEEEEeccCCCChhhhh
Q 044615 524 VKFYGFCSHALHSFVVYEYLEMGSLAMNL 552 (571)
Q Consensus 524 v~l~~~~~~~~~~~lv~e~~~~G~L~~~l 552 (571)
.....+.. ...+|||||++++++....
T Consensus 82 ~~p~~~~~--~~~~iVmE~i~g~~l~~~~ 108 (190)
T cd05147 82 PCPEPILL--KSHVLVMEFIGDDGWAAPR 108 (190)
T ss_pred CCCcEEEe--cCCEEEEEEeCCCCCcchh
Confidence 54433322 2238999999998876553
No 415
>PTZ00284 protein kinase; Provisional
Probab=98.76 E-value=1.9e-08 Score=106.31 Aligned_cols=107 Identities=19% Similarity=0.171 Sum_probs=78.6
Q ss_pred HHHHHccCCCccCeeeccCcceEEEEE-cCCCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhcCC------CCcccEEE
Q 044615 456 EIIRATNNFDDGHCIGNGGQGSVYKAK-LPTGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKIRH------RNIVKFYG 528 (571)
Q Consensus 456 ~~~~~~~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~H------~niv~l~~ 528 (571)
++...+++|++.+.||+|+||.||+|. ..+++.||||+++... .....+..|++++.+++| ++++++++
T Consensus 123 ~~~~~~~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~----~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~ 198 (467)
T PTZ00284 123 DIDVSTQRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVP----KYTRDAKIEIQFMEKVRQADPADRFPLMKIQR 198 (467)
T ss_pred ccccCCCcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecch----hhHHHHHHHHHHHHHHhhcCcccCcceeeeEE
Confidence 334456789999999999999999998 4578899999986422 123445667777766654 45888999
Q ss_pred EEEeC-CeeEEEEeccCCCChhhhhccCCCccCCCHHHHhhhc
Q 044615 529 FCSHA-LHSFVVYEYLEMGSLAMNLSNDAAAEQFCWTKRMNAI 570 (571)
Q Consensus 529 ~~~~~-~~~~lv~e~~~~G~L~~~l~~~~~~~~l~w~~r~~ia 570 (571)
++... ...|+|||++ +|+|.+++.+.+ .++|.....|+
T Consensus 199 ~~~~~~~~~~iv~~~~-g~~l~~~l~~~~---~l~~~~~~~i~ 237 (467)
T PTZ00284 199 YFQNETGHMCIVMPKY-GPCLLDWIMKHG---PFSHRHLAQII 237 (467)
T ss_pred EEEcCCceEEEEEecc-CCCHHHHHHHcC---CCCHHHHHHHH
Confidence 88764 5688999988 679999887542 46666655543
No 416
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=98.75 E-value=3.3e-09 Score=115.31 Aligned_cols=82 Identities=28% Similarity=0.433 Sum_probs=66.5
Q ss_pred HHHccCCCccCeeeccCcceEEEEEc-CCCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhcCCCCcccEEEEEEeCCee
Q 044615 458 IRATNNFDDGHCIGNGGQGSVYKAKL-PTGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKIRHRNIVKFYGFCSHALHS 536 (571)
Q Consensus 458 ~~~~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~ 536 (571)
-+...+|+....+|+||||.||+++. -+|+.||||+|.... ..+......+|++++++++|||||+++..+.+....
T Consensus 475 SRY~~DFEEL~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~--s~~~~skI~rEVk~LArLnHpNVVRYysAWVEs~~~ 552 (1351)
T KOG1035|consen 475 SRYLNDFEELELLGKGGFGSVVKVRNKLDGREYAIKKIPLKA--SDKLYSKILREVKLLARLNHPNVVRYYSAWVESTAE 552 (1351)
T ss_pred hhHhhhhHHHHHhcCCCCceEEEEeecccchhhhhhhccCch--HHHHHHHHHHHHHHHhhcCCcceeeeehhhhccCCc
Confidence 35566889999999999999999994 499999999998654 334456688999999999999999999988765544
Q ss_pred EEEEe
Q 044615 537 FVVYE 541 (571)
Q Consensus 537 ~lv~e 541 (571)
.-++|
T Consensus 553 ~~~~e 557 (1351)
T KOG1035|consen 553 LTVLE 557 (1351)
T ss_pred ccccc
Confidence 44444
No 417
>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]
Probab=98.74 E-value=1e-08 Score=103.14 Aligned_cols=97 Identities=18% Similarity=0.114 Sum_probs=78.4
Q ss_pred HHccCCCccCeeeccCcceEEEEEcC-CCCEEEEEEccCCCCCc--hH---hHHHHHHHHHHHhhcC---CCCcccEEEE
Q 044615 459 RATNNFDDGHCIGNGGQGSVYKAKLP-TGEIVDVKKFHSPLPDE--MA---CQQEFLNEVNALTKIR---HRNIVKFYGF 529 (571)
Q Consensus 459 ~~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~--~~---~~~~~~~Ei~~l~~l~---H~niv~l~~~ 529 (571)
....+|...+.+|+|+||+|+.|.++ ....|+||.|.+.+.-. +. ....+-.||.||.+++ |+||++++++
T Consensus 558 ~k~s~yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLdf 637 (772)
T KOG1152|consen 558 KKFSDYTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLDF 637 (772)
T ss_pred cccccceeeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhhe
Confidence 34567999999999999999999954 56779999998765321 11 1223668999999997 9999999999
Q ss_pred EEeCCeeEEEEec-cCCCChhhhhccC
Q 044615 530 CSHALHSFVVYEY-LEMGSLAMNLSND 555 (571)
Q Consensus 530 ~~~~~~~~lv~e~-~~~G~L~~~l~~~ 555 (571)
|++++.+||+||- =++-||+++|..+
T Consensus 638 FEddd~yyl~te~hg~gIDLFd~IE~k 664 (772)
T KOG1152|consen 638 FEDDDYYYLETEVHGEGIDLFDFIEFK 664 (772)
T ss_pred eecCCeeEEEecCCCCCcchhhhhhcc
Confidence 9999999999995 4678999999754
No 418
>cd00180 PKc Catalytic domain of Protein Kinases. Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which
Probab=98.73 E-value=8.1e-08 Score=89.12 Aligned_cols=97 Identities=33% Similarity=0.519 Sum_probs=79.7
Q ss_pred eeccCcceEEEEEcC-CCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhcCCCCcccEEEEEEeCCeeEEEEeccCCCCh
Q 044615 470 IGNGGQGSVYKAKLP-TGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKIRHRNIVKFYGFCSHALHSFVVYEYLEMGSL 548 (571)
Q Consensus 470 lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~G~L 548 (571)
||+|++|.||++... +++.+++|.+....... ..+.+.+|++.++.++|++++++++++......+++|||+++++|
T Consensus 1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~--~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~~~e~~~~~~l 78 (215)
T cd00180 1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSS--LLEELLREIEILKKLNHPNIVKLYGVFEDENHLYLVMEYCEGGSL 78 (215)
T ss_pred CCcCCceEEEEEEecCCCcEEEEEEeccccchh--HHHHHHHHHHHHHhcCCCCeeeEeeeeecCCeEEEEEecCCCCcH
Confidence 689999999999954 58999999997654321 346799999999999999999999999998999999999999999
Q ss_pred hhhhccCCCccCCCHHHHhhhc
Q 044615 549 AMNLSNDAAAEQFCWTKRMNAI 570 (571)
Q Consensus 549 ~~~l~~~~~~~~l~w~~r~~ia 570 (571)
.+++.... ..+++..+..++
T Consensus 79 ~~~~~~~~--~~~~~~~~~~~~ 98 (215)
T cd00180 79 KDLLKENE--GKLSEDEILRIL 98 (215)
T ss_pred HHHHHhcc--CCCCHHHHHHHH
Confidence 99997542 245666655543
No 419
>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]
Probab=98.72 E-value=3.2e-08 Score=106.99 Aligned_cols=92 Identities=30% Similarity=0.480 Sum_probs=77.2
Q ss_pred CCCccCeeeccCcceEEEEEcC----C----CCEEEEEEccCCCCCchHhHHHHHHHHHHHhhc-CCCCcccEEEEEEeC
Q 044615 463 NFDDGHCIGNGGQGSVYKAKLP----T----GEIVDVKKFHSPLPDEMACQQEFLNEVNALTKI-RHRNIVKFYGFCSHA 533 (571)
Q Consensus 463 ~~~~~~~lg~G~~g~V~~~~~~----~----~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l-~H~niv~l~~~~~~~ 533 (571)
+..+.+.+|+|+||+|++|... . ...||||.++..... ...+.+..|+++|+.+ +|||||.++|+|...
T Consensus 297 ~l~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~--~~~~~~~~El~~m~~~g~H~niv~llG~~t~~ 374 (609)
T KOG0200|consen 297 NLKLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASS--SEKKDLMSELNVLKELGKHPNIVNLLGACTQD 374 (609)
T ss_pred hccccceeecccccceEeEEEeecccccccceEEEEEEecccccCc--HHHHHHHHHHHHHHHhcCCcchhhheeeeccC
Confidence 3455568999999999999731 1 456999999765433 4568899999999998 699999999999999
Q ss_pred CeeEEEEeccCCCChhhhhccCC
Q 044615 534 LHSFVVYEYLEMGSLAMNLSNDA 556 (571)
Q Consensus 534 ~~~~lv~e~~~~G~L~~~l~~~~ 556 (571)
+..++|+||++.|+|.++++..+
T Consensus 375 ~~~~~v~Ey~~~G~L~~~Lr~~r 397 (609)
T KOG0200|consen 375 GPLYVIVEYAEHGDLLEFLRKKR 397 (609)
T ss_pred CceEEEEEeccCCcHHHHHHhcc
Confidence 99999999999999999998655
No 420
>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional
Probab=98.71 E-value=4e-08 Score=91.17 Aligned_cols=105 Identities=15% Similarity=0.082 Sum_probs=80.0
Q ss_pred ecCccccHHHHHH--HccCCCccCeeeccCcceEEEEEcCCCCEEEEEEccCCCCCchHhHHH------HHHHHHHHhhc
Q 044615 447 TFDGKIVHEEIIR--ATNNFDDGHCIGNGGQGSVYKAKLPTGEIVDVKKFHSPLPDEMACQQE------FLNEVNALTKI 518 (571)
Q Consensus 447 ~~~~~~~~~~~~~--~~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~------~~~Ei~~l~~l 518 (571)
..+..+.+.++.. ..+.|...+.+|.|+||.||.+.. ++..+|+|.+.+.........+. +.+|++.+.++
T Consensus 14 ~~~~~~~~~~~~~~~l~~~y~~~~~l~~~~f~~v~l~~~-~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL 92 (232)
T PRK10359 14 YKDNDNKYKEIFDDFLSYNIKTIKVFRNIDDTKVSLIDT-DYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRV 92 (232)
T ss_pred ecCCcccHHHHHHHHhhCceEEEEEecCCCceEEEEEec-CCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHH
Confidence 3333444444432 356799999999999999999766 57789999998655444333333 68999999999
Q ss_pred CCCCcccEEEEEEeC--------CeeEEEEeccCCCChhhhh
Q 044615 519 RHRNIVKFYGFCSHA--------LHSFVVYEYLEMGSLAMNL 552 (571)
Q Consensus 519 ~H~niv~l~~~~~~~--------~~~~lv~e~~~~G~L~~~l 552 (571)
.||+|..+.+++... ...++||||++|.+|.++.
T Consensus 93 ~~~GI~~~~d~~~~~~~~~~~~~~~~~lvmEyi~G~tL~~~~ 134 (232)
T PRK10359 93 RSEGLASLNDFYLLAERKTLRYAHTYIMLIEYIEGVELNDMP 134 (232)
T ss_pred HHCCCCcceEeeeecccccccccCCeEEEEEEECCccHHHhh
Confidence 999999999987644 3578999999999998764
No 421
>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]
Probab=98.66 E-value=9.3e-09 Score=94.08 Aligned_cols=94 Identities=18% Similarity=0.307 Sum_probs=78.7
Q ss_pred cCCCccCeeeccCcceEEEEE-cCCCCEEEEEEccCCCCCc-----hHhHHHHHHHHHHHhhc-CCCCcccEEEEEEeCC
Q 044615 462 NNFDDGHCIGNGGQGSVYKAK-LPTGEIVDVKKFHSPLPDE-----MACQQEFLNEVNALTKI-RHRNIVKFYGFCSHAL 534 (571)
Q Consensus 462 ~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~-----~~~~~~~~~Ei~~l~~l-~H~niv~l~~~~~~~~ 534 (571)
+.|+..+.+|.|..+.|.++. .++|..+|+|++....... ....+.-.+|+.|++++ .||+|+++.++|+++.
T Consensus 17 ~~y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~yes~s 96 (411)
T KOG0599|consen 17 AKYEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDVYESDA 96 (411)
T ss_pred hhcChHHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeeeccCcc
Confidence 457888899999999999887 5689999999997543222 12345577899999987 7999999999999999
Q ss_pred eeEEEEeccCCCChhhhhccC
Q 044615 535 HSFVVYEYLEMGSLAMNLSND 555 (571)
Q Consensus 535 ~~~lv~e~~~~G~L~~~l~~~ 555 (571)
..++|+|.|+.|.|+|+|...
T Consensus 97 F~FlVFdl~prGELFDyLts~ 117 (411)
T KOG0599|consen 97 FVFLVFDLMPRGELFDYLTSK 117 (411)
T ss_pred hhhhhhhhcccchHHHHhhhh
Confidence 999999999999999999753
No 422
>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co
Probab=98.65 E-value=1.4e-07 Score=95.11 Aligned_cols=103 Identities=20% Similarity=0.251 Sum_probs=77.2
Q ss_pred CCCccCeeeccCcceEEEEEc-CC--CCEEEEEEccCCCCCchHhHHHHHHHHHHHhhc-CCCCcccEEEEEEeC----C
Q 044615 463 NFDDGHCIGNGGQGSVYKAKL-PT--GEIVDVKKFHSPLPDEMACQQEFLNEVNALTKI-RHRNIVKFYGFCSHA----L 534 (571)
Q Consensus 463 ~~~~~~~lg~G~~g~V~~~~~-~~--~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l-~H~niv~l~~~~~~~----~ 534 (571)
+|+..+.||+|+||.||++.. .+ +..||+|++...... ....+.+.+|++++.++ +||||+++++++... .
T Consensus 1 ~y~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~~ 79 (332)
T cd07857 1 RYELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVFSK-KILAKRALRELKLLRHFRGHKNITCLYDMDIVFPGNFN 79 (332)
T ss_pred CceEEEEccccCCeEEEEEEeCCCCcCceEEEEEecccccc-chhHHHHHHHHHHHHHhcCCCChheeeeeeeeccccCC
Confidence 377788999999999999994 35 788999998643222 22346688999999999 599999999976433 4
Q ss_pred eeEEEEeccCCCChhhhhccCCCccCCCHHHHhhhc
Q 044615 535 HSFVVYEYLEMGSLAMNLSNDAAAEQFCWTKRMNAI 570 (571)
Q Consensus 535 ~~~lv~e~~~~G~L~~~l~~~~~~~~l~w~~r~~ia 570 (571)
..|+++||+. ++|.+++... ..+++.....++
T Consensus 80 ~~~~~~e~~~-~~L~~~l~~~---~~~~~~~~~~~~ 111 (332)
T cd07857 80 ELYLYEELME-ADLHQIIRSG---QPLTDAHFQSFI 111 (332)
T ss_pred cEEEEEeccc-CCHHHHHhcC---CCCCHHHHHHHH
Confidence 5789999986 6899988643 246666655543
No 423
>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins. Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha
Probab=98.62 E-value=8.3e-08 Score=91.60 Aligned_cols=87 Identities=16% Similarity=0.034 Sum_probs=69.2
Q ss_pred cCcceEEEEE-cCCCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhcCCCCcccEEEEEEeCCeeEEEEeccCCCChhhh
Q 044615 473 GGQGSVYKAK-LPTGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKIRHRNIVKFYGFCSHALHSFVVYEYLEMGSLAMN 551 (571)
Q Consensus 473 G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~G~L~~~ 551 (571)
|.||.||+++ ..+++.||+|.+.... .+.+|...+....||||+++++++.+.+..|+||||+++|+|.++
T Consensus 4 g~~~~v~~~~~~~~~~~~~~K~i~~~~--------~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~ 75 (237)
T cd05576 4 GVIDKVLLVMDTRTQQTFILKGLRKSS--------EYSRERLTIIPHCVPNMVCLHKYIVSEDSVFLVLQHAEGGKLWSH 75 (237)
T ss_pred cccceEEEEEEccCCcEEEEEeecchh--------hhhhHHHHHHhcCCCceeehhhheecCCeEEEEEecCCCCCHHHH
Confidence 8999999999 5689999999997542 233455556667799999999999999999999999999999999
Q ss_pred hccCCCccCCCHHHHhhhc
Q 044615 552 LSNDAAAEQFCWTKRMNAI 570 (571)
Q Consensus 552 l~~~~~~~~l~w~~r~~ia 570 (571)
+.+.. .++|.....++
T Consensus 76 l~~~~---~l~~~~~~~~~ 91 (237)
T cd05576 76 ISKFL---NIPEECVKRWA 91 (237)
T ss_pred HHHhc---CCCHHHHHHHH
Confidence 97542 36666655543
No 424
>PHA03210 serine/threonine kinase US3; Provisional
Probab=98.62 E-value=5.3e-08 Score=103.46 Aligned_cols=93 Identities=16% Similarity=0.207 Sum_probs=69.0
Q ss_pred ccCCCccCeeeccCcceEEEEEcC--CCCEEEEEEc--------------cCCCCCchHhHHHHHHHHHHHhhcCCCCcc
Q 044615 461 TNNFDDGHCIGNGGQGSVYKAKLP--TGEIVDVKKF--------------HSPLPDEMACQQEFLNEVNALTKIRHRNIV 524 (571)
Q Consensus 461 ~~~~~~~~~lg~G~~g~V~~~~~~--~~~~vavK~~--------------~~~~~~~~~~~~~~~~Ei~~l~~l~H~niv 524 (571)
.++|++.+.||+|+||+||+|..+ .+..++.|.+ .+...........+.+|+.++++++|||||
T Consensus 147 ~~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~Ei~il~~l~HpnIv 226 (501)
T PHA03210 147 LAHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLENEILALGRLNHENIL 226 (501)
T ss_pred hhccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhcchHHHHHHHHHHHHHHhCCCCCcC
Confidence 467999999999999999998742 2332333311 111111112345688999999999999999
Q ss_pred cEEEEEEeCCeeEEEEeccCCCChhhhhcc
Q 044615 525 KFYGFCSHALHSFVVYEYLEMGSLAMNLSN 554 (571)
Q Consensus 525 ~l~~~~~~~~~~~lv~e~~~~G~L~~~l~~ 554 (571)
++++++.+.+..|+|+|++. +++.+++..
T Consensus 227 ~l~~~~~~~~~~~lv~e~~~-~~l~~~l~~ 255 (501)
T PHA03210 227 KIEEILRSEANTYMITQKYD-FDLYSFMYD 255 (501)
T ss_pred cEeEEEEECCeeEEEEeccc-cCHHHHHhh
Confidence 99999999999999999986 578887764
No 425
>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro
Probab=98.60 E-value=2.6e-07 Score=84.82 Aligned_cols=82 Identities=17% Similarity=0.211 Sum_probs=60.2
Q ss_pred cCeeeccCcceEEEEEcCCCCEEEEEEccCCCCCchH-----------------------hHHHHHHHHHHHhhcCCCCc
Q 044615 467 GHCIGNGGQGSVYKAKLPTGEIVDVKKFHSPLPDEMA-----------------------CQQEFLNEVNALTKIRHRNI 523 (571)
Q Consensus 467 ~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~-----------------------~~~~~~~Ei~~l~~l~H~ni 523 (571)
...||+|+||+||+|...+|+.||||++++....... ....+.+|.+.+.++.|+++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i 81 (190)
T cd05145 2 NGCISTGKEANVYHARTGDGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEAGV 81 (190)
T ss_pred CceeecCCCcEEEEEEcCCCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 4679999999999999668999999999865321000 01224689999999999998
Q ss_pred ccEEEEEEeCCeeEEEEeccCCCChhh
Q 044615 524 VKFYGFCSHALHSFVVYEYLEMGSLAM 550 (571)
Q Consensus 524 v~l~~~~~~~~~~~lv~e~~~~G~L~~ 550 (571)
.....+.... .|+||||++|+++..
T Consensus 82 ~~p~~~~~~~--~~lVmE~~~g~~~~~ 106 (190)
T cd05145 82 PVPEPILLKK--NVLVMEFIGDDGSPA 106 (190)
T ss_pred CCceEEEecC--CEEEEEEecCCCchh
Confidence 6555544332 489999999986543
No 426
>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=98.59 E-value=5.7e-08 Score=97.46 Aligned_cols=100 Identities=21% Similarity=0.295 Sum_probs=83.3
Q ss_pred cCCCccCeeeccCcceEEEEEcCCCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhc-CCCCcccEEEEEEeCCeeEEEE
Q 044615 462 NNFDDGHCIGNGGQGSVYKAKLPTGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKI-RHRNIVKFYGFCSHALHSFVVY 540 (571)
Q Consensus 462 ~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l-~H~niv~l~~~~~~~~~~~lv~ 540 (571)
..|++.+.||+||.++||++...+.+.||+|++.... .+.+....|.+||..|.++ .|.+||++++|-...+.+||||
T Consensus 361 ~~Yeilk~iG~GGSSkV~kV~~s~~~iyalkkv~~~~-~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~d~~lYmvm 439 (677)
T KOG0596|consen 361 REYEILKQIGSGGSSKVFKVLNSDKQIYALKKVVLLE-ADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEVTDGYLYMVM 439 (677)
T ss_pred chhhHHHhhcCCCcceeeeeecCCCcchhhhHHHHhh-cCHHHHHHHHHHHHHHHHhcCCceEEEEeeeeccCceEEEEe
Confidence 4589999999999999999998888889999886543 3446678899999999999 6899999999999999999999
Q ss_pred eccCCCChhhhhccCCCccCCCHH
Q 044615 541 EYLEMGSLAMNLSNDAAAEQFCWT 564 (571)
Q Consensus 541 e~~~~G~L~~~l~~~~~~~~l~w~ 564 (571)
||=+ -||..+|+++... ..+|.
T Consensus 440 E~Gd-~DL~kiL~k~~~~-~~~~~ 461 (677)
T KOG0596|consen 440 ECGD-IDLNKILKKKKSI-DPDWF 461 (677)
T ss_pred eccc-ccHHHHHHhccCC-CchHH
Confidence 9755 5999999866543 34453
No 427
>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=98.57 E-value=9.8e-09 Score=91.60 Aligned_cols=85 Identities=15% Similarity=0.328 Sum_probs=72.5
Q ss_pred ccCCCccCeeeccCcceEEEEE-cCCCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhcC-CCCcccEEEEEEeC--Cee
Q 044615 461 TNNFDDGHCIGNGGQGSVYKAK-LPTGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKIR-HRNIVKFYGFCSHA--LHS 536 (571)
Q Consensus 461 ~~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~-H~niv~l~~~~~~~--~~~ 536 (571)
.++|++.+++|+|.|++||.|. ..+.+.++||++++.+ .+.+.+|++++..+. |||||++++...++ ...
T Consensus 37 ~ddYeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLKPVk------kkKIkREikIL~nL~gg~NIi~L~DiV~Dp~Sktp 110 (338)
T KOG0668|consen 37 QDDYEIVRKVGRGKYSEVFEGINITNNEKCVIKILKPVK------KKKIKREIKILQNLRGGPNIIKLLDIVKDPESKTP 110 (338)
T ss_pred cchHHHHHHHcCccHhhHhcccccCCCceEEEeeechHH------HHHHHHHHHHHHhccCCCCeeehhhhhcCccccCc
Confidence 4578999999999999999998 6688899999997643 466889999999997 99999999999875 456
Q ss_pred EEEEeccCCCChhhh
Q 044615 537 FVVYEYLEMGSLAMN 551 (571)
Q Consensus 537 ~lv~e~~~~G~L~~~ 551 (571)
.+|+||+.+-|....
T Consensus 111 aLiFE~v~n~Dfk~l 125 (338)
T KOG0668|consen 111 SLIFEYVNNTDFKQL 125 (338)
T ss_pred hhHhhhhccccHHHH
Confidence 799999999876543
No 428
>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain. Phosphotransferases. Serine or threonine-specific kinase subfamily.
Probab=98.56 E-value=2.4e-07 Score=88.21 Aligned_cols=91 Identities=25% Similarity=0.373 Sum_probs=74.8
Q ss_pred CcceEEEEEcC-CCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhcCCCCcccEEEEEEeCCeeEEEEeccCCCChhhhh
Q 044615 474 GQGSVYKAKLP-TGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKIRHRNIVKFYGFCSHALHSFVVYEYLEMGSLAMNL 552 (571)
Q Consensus 474 ~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~G~L~~~l 552 (571)
+||.||+|... +++.+|+|++........ .+.+.+|++.+++++|+|++++++++......+++|||+++|+|.+++
T Consensus 1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~--~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~~ 78 (244)
T smart00220 1 SFGKVYLARDKKTGKLVAIKVIKKEKIKKK--RERILREISILKKLKHPNIVRLYDVFEDEDKLYLVMEYCDGGDLFDLL 78 (244)
T ss_pred CceEEEEEEECCCCcEEEEEEecccccccH--HHHHHHHHHHHHhCCCCcHHHHHhheeeCCEEEEEEeCCCCCCHHHHH
Confidence 58999999954 689999999976543321 578999999999999999999999999999999999999999999998
Q ss_pred ccCCCccCCCHHHHhhh
Q 044615 553 SNDAAAEQFCWTKRMNA 569 (571)
Q Consensus 553 ~~~~~~~~l~w~~r~~i 569 (571)
..... +++....++
T Consensus 79 ~~~~~---~~~~~~~~~ 92 (244)
T smart00220 79 KKRGR---LSEDEARFY 92 (244)
T ss_pred HhccC---CCHHHHHHH
Confidence 75432 566655544
No 429
>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=98.56 E-value=9.7e-09 Score=99.09 Aligned_cols=94 Identities=18% Similarity=0.201 Sum_probs=77.1
Q ss_pred cCCCccCeeeccCcceEEEEEcC-CCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhc-CCCCcccEEEEEEeCCeeEEE
Q 044615 462 NNFDDGHCIGNGGQGSVYKAKLP-TGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKI-RHRNIVKFYGFCSHALHSFVV 539 (571)
Q Consensus 462 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l-~H~niv~l~~~~~~~~~~~lv 539 (571)
.+|....+||+|+||+|..|..+ +.+.+|||+++++..-...+.+--+.|-++|+-. +-|.+|+++.+|++-+.+|.|
T Consensus 349 tDFnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHScFQTmDRLyFV 428 (683)
T KOG0696|consen 349 TDFNFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSCFQTMDRLYFV 428 (683)
T ss_pred cccceEEEeccCccceeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHHhhhhhheeeE
Confidence 46899999999999999999854 6788999999876543333334445677777766 568999999999999999999
Q ss_pred EeccCCCChhhhhccC
Q 044615 540 YEYLEMGSLAMNLSND 555 (571)
Q Consensus 540 ~e~~~~G~L~~~l~~~ 555 (571)
|||+.||||-.++++-
T Consensus 429 MEyvnGGDLMyhiQQ~ 444 (683)
T KOG0696|consen 429 MEYVNGGDLMYHIQQV 444 (683)
T ss_pred EEEecCchhhhHHHHh
Confidence 9999999999998864
No 430
>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]
Probab=98.55 E-value=2.8e-08 Score=101.31 Aligned_cols=102 Identities=20% Similarity=0.293 Sum_probs=77.3
Q ss_pred ccCeeeccCcceEEEEE-cCCCCEEEEEEccCC-CCCchHhHHHHHHHHHHHhhcCCCCcccEEEEEEeCCe--eEEEEe
Q 044615 466 DGHCIGNGGQGSVYKAK-LPTGEIVDVKKFHSP-LPDEMACQQEFLNEVNALTKIRHRNIVKFYGFCSHALH--SFVVYE 541 (571)
Q Consensus 466 ~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~-~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~--~~lv~e 541 (571)
...+||+|+|-+||+|. -.+|..||=-.++.. ........++|..|+++|+.++|||||++++++.+... .-+|.|
T Consensus 44 ~~evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~~n~~in~iTE 123 (632)
T KOG0584|consen 44 FDEVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDTDNKTINFITE 123 (632)
T ss_pred hhhhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCceeeeeeheecCCCceeeeeee
Confidence 34679999999999998 457877763222211 12334556889999999999999999999999987654 778999
Q ss_pred ccCCCChhhhhccCCCc---cCCCHHHHh
Q 044615 542 YLEMGSLAMNLSNDAAA---EQFCWTKRM 567 (571)
Q Consensus 542 ~~~~G~L~~~l~~~~~~---~~l~w~~r~ 567 (571)
.+..|+|+.|+++.+.. ..-.|.+.+
T Consensus 124 L~TSGtLr~Y~kk~~~vn~kaik~W~RQI 152 (632)
T KOG0584|consen 124 LFTSGTLREYRKKHRRVNIKAIKSWCRQI 152 (632)
T ss_pred cccCCcHHHHHHHhccCCHHHHHHHHHHH
Confidence 99999999999875431 234677654
No 431
>PRK14879 serine/threonine protein kinase; Provisional
Probab=98.54 E-value=2.6e-07 Score=86.43 Aligned_cols=86 Identities=14% Similarity=0.137 Sum_probs=69.8
Q ss_pred CeeeccCcceEEEEEcCCCCEEEEEEccCCCCCch-----HhHHHHHHHHHHHhhcCCCCcccEEEEEEeCCeeEEEEec
Q 044615 468 HCIGNGGQGSVYKAKLPTGEIVDVKKFHSPLPDEM-----ACQQEFLNEVNALTKIRHRNIVKFYGFCSHALHSFVVYEY 542 (571)
Q Consensus 468 ~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~-----~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 542 (571)
+.||+|++|.||+|.. .|..+++|.......... .....+.+|++++..+.|++++....++...+..++||||
T Consensus 2 ~~l~~G~~~~vy~~~~-~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~ 80 (211)
T PRK14879 2 KLIKRGAEAEIYLGDF-LGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFVDPENFIIVMEY 80 (211)
T ss_pred cccccCceEEEEEEee-CCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEeCCCCEEEEEE
Confidence 5689999999999987 677899998764332211 1234688999999999999998888888778888999999
Q ss_pred cCCCChhhhhcc
Q 044615 543 LEMGSLAMNLSN 554 (571)
Q Consensus 543 ~~~G~L~~~l~~ 554 (571)
++|++|.+++..
T Consensus 81 ~~G~~L~~~~~~ 92 (211)
T PRK14879 81 IEGEPLKDLINS 92 (211)
T ss_pred eCCcCHHHHHHh
Confidence 999999998864
No 432
>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=98.53 E-value=2.8e-08 Score=93.43 Aligned_cols=95 Identities=19% Similarity=0.246 Sum_probs=79.0
Q ss_pred ccCCCccCeeeccCcceEEEEE-cCCCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhc-CCCCcccEEEEEEeCCeeEE
Q 044615 461 TNNFDDGHCIGNGGQGSVYKAK-LPTGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKI-RHRNIVKFYGFCSHALHSFV 538 (571)
Q Consensus 461 ~~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l-~H~niv~l~~~~~~~~~~~l 538 (571)
..+|...++||+|+|++|..++ .++.+.+|+|++++.-..+..+..=+..|-.+.... +||.+|.++.+|.+...++.
T Consensus 249 l~df~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhscfqtesrlff 328 (593)
T KOG0695|consen 249 LQDFDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSCFQTESRLFF 328 (593)
T ss_pred cccceeeeeecCcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhhhcccceEEE
Confidence 4578999999999999999999 568899999999877655554445556676666554 89999999999999999999
Q ss_pred EEeccCCCChhhhhccC
Q 044615 539 VYEYLEMGSLAMNLSND 555 (571)
Q Consensus 539 v~e~~~~G~L~~~l~~~ 555 (571)
|.||++||+|--+.++.
T Consensus 329 vieyv~ggdlmfhmqrq 345 (593)
T KOG0695|consen 329 VIEYVNGGDLMFHMQRQ 345 (593)
T ss_pred EEEEecCcceeeehhhh
Confidence 99999999997776643
No 433
>KOG1859 consensus Leucine-rich repeat proteins [General function prediction only]
Probab=98.53 E-value=1.2e-09 Score=112.23 Aligned_cols=181 Identities=27% Similarity=0.259 Sum_probs=96.1
Q ss_pred CccccCCCCCCEEEccCCCCCccCChhhhhccCCCcEEEccCCcccc---cCCc---cccC---CCCCcEEeCccCcCcC
Q 044615 162 PKEIGNMNSLSILDLSSNKLNGSIPLSLANLTNSLKVLYLSSNHIVG---EIPL---GHGM---LSSLIQLTLNNNELSG 232 (571)
Q Consensus 162 ~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~~L~~L~l~~n~~~~---~~~~---~~~~---l~~L~~L~l~~n~l~~ 232 (571)
|-.+..+.+|+.|.+.++.+.. ..++..+-..|+.|... |.+.. .+.. .+.+ ...|...+.+.|.+.
T Consensus 102 pi~ifpF~sLr~LElrg~~L~~--~~GL~~lr~qLe~LIC~-~Sl~Al~~v~ascggd~~ns~~Wn~L~~a~fsyN~L~- 177 (1096)
T KOG1859|consen 102 PISIFPFRSLRVLELRGCDLST--AKGLQELRHQLEKLICH-NSLDALRHVFASCGGDISNSPVWNKLATASFSYNRLV- 177 (1096)
T ss_pred CceeccccceeeEEecCcchhh--hhhhHHHHHhhhhhhhh-ccHHHHHHHHHHhccccccchhhhhHhhhhcchhhHH-
Confidence 5567788899999999998863 23344443345555432 22211 0100 1111 124555566666665
Q ss_pred CCChhhhCCCCCCEEEcccCccccccchhhccCCCCCEEEcCCccCccCcchhhhcccCCCEEEccCCcCCcccchhccC
Q 044615 233 QLSPELGSLIQLEYLDLSANTFHKSIPESLSNLVKLHYLNLSNNQFSQKIPNKIEKLIHLSELDLSHNIFREEIPSQICS 312 (571)
Q Consensus 233 ~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~ 312 (571)
.....+.-++.|+.|+|++|+++.. +.+..|++|+.|||+.|.++...--...++ .|+.|.|++|.++... .+.+
T Consensus 178 ~mD~SLqll~ale~LnLshNk~~~v--~~Lr~l~~LkhLDlsyN~L~~vp~l~~~gc-~L~~L~lrnN~l~tL~--gie~ 252 (1096)
T KOG1859|consen 178 LMDESLQLLPALESLNLSHNKFTKV--DNLRRLPKLKHLDLSYNCLRHVPQLSMVGC-KLQLLNLRNNALTTLR--GIEN 252 (1096)
T ss_pred hHHHHHHHHHHhhhhccchhhhhhh--HHHHhcccccccccccchhccccccchhhh-hheeeeecccHHHhhh--hHHh
Confidence 3444556666677777777766543 356666677777777776653221122222 3666666666654321 2455
Q ss_pred CCCCCEEEccCCcCccccc-cccccCCCCCEEECcCCcCc
Q 044615 313 MQSLEKLNLSHNNLSGSIP-RCFEEMHWLSCIDISYNALQ 351 (571)
Q Consensus 313 l~~L~~L~Ls~n~l~~~~p-~~~~~l~~L~~L~ls~N~l~ 351 (571)
+++|+.||++.|-|.+.-. .-+..+..|+.|.|.+|++.
T Consensus 253 LksL~~LDlsyNll~~hseL~pLwsLs~L~~L~LeGNPl~ 292 (1096)
T KOG1859|consen 253 LKSLYGLDLSYNLLSEHSELEPLWSLSSLIVLWLEGNPLC 292 (1096)
T ss_pred hhhhhccchhHhhhhcchhhhHHHHHHHHHHHhhcCCccc
Confidence 6666666666665543211 11223344555555555554
No 434
>KOG2982 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.52 E-value=2.2e-08 Score=92.87 Aligned_cols=62 Identities=19% Similarity=0.183 Sum_probs=28.1
Q ss_pred CCCCEEEcCCccCccCc-chhhhcccCCCEEEccCCcCCcc-cchhccCCCCCCEEEccCCcCc
Q 044615 266 VKLHYLNLSNNQFSQKI-PNKIEKLIHLSELDLSHNIFREE-IPSQICSMQSLEKLNLSHNNLS 327 (571)
Q Consensus 266 ~~L~~L~Ls~n~l~~~~-~~~~~~l~~L~~L~Ls~n~l~~~-~~~~~~~l~~L~~L~Ls~n~l~ 327 (571)
+++..+.+..|.+...- ...+..++.+..|+|+.|++... -...+..+++|..|.+++|++.
T Consensus 199 pnv~sv~v~e~PlK~~s~ek~se~~p~~~~LnL~~~~idswasvD~Ln~f~~l~dlRv~~~Pl~ 262 (418)
T KOG2982|consen 199 PNVNSVFVCEGPLKTESSEKGSEPFPSLSCLNLGANNIDSWASVDALNGFPQLVDLRVSENPLS 262 (418)
T ss_pred ccchheeeecCcccchhhcccCCCCCcchhhhhcccccccHHHHHHHcCCchhheeeccCCccc
Confidence 34444444444443211 12233344444555555554332 1223455556666666666554
No 435
>KOG1859 consensus Leucine-rich repeat proteins [General function prediction only]
Probab=98.52 E-value=3e-09 Score=109.46 Aligned_cols=179 Identities=32% Similarity=0.350 Sum_probs=126.0
Q ss_pred cccccCCCCCCeeecccCcCcccCCccccCCC-CCCEEEccCCCCC----------ccCChhhhhccCCCcEEEccCCcc
Q 044615 138 PLSFANLTSLSILYLYENSLCDSIPKEIGNMN-SLSILDLSSNKLN----------GSIPLSLANLTNSLKVLYLSSNHI 206 (571)
Q Consensus 138 ~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~-~L~~L~L~~n~l~----------~~~p~~~~~l~~~L~~L~l~~n~~ 206 (571)
|-.+..+..|+.|.|.++.+.. ...+..+. .|++|.. .|.+. |.+..++.. +.|...+.++|.+
T Consensus 102 pi~ifpF~sLr~LElrg~~L~~--~~GL~~lr~qLe~LIC-~~Sl~Al~~v~ascggd~~ns~~W--n~L~~a~fsyN~L 176 (1096)
T KOG1859|consen 102 PISIFPFRSLRVLELRGCDLST--AKGLQELRHQLEKLIC-HNSLDALRHVFASCGGDISNSPVW--NKLATASFSYNRL 176 (1096)
T ss_pred CceeccccceeeEEecCcchhh--hhhhHHHHHhhhhhhh-hccHHHHHHHHHHhccccccchhh--hhHhhhhcchhhH
Confidence 6677888999999999999864 22232221 3444432 22221 122222211 2388889999998
Q ss_pred cccCCccccCCCCCcEEeCccCcCcCCCChhhhCCCCCCEEEcccCccccccchhhccCCCCCEEEcCCccCccCcchhh
Q 044615 207 VGEIPLGHGMLSSLIQLTLNNNELSGQLSPELGSLIQLEYLDLSANTFHKSIPESLSNLVKLHYLNLSNNQFSQKIPNKI 286 (571)
Q Consensus 207 ~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~ 286 (571)
. .+..++.-++.|+.|+|++|++... ..+..+++|++|||++|.+....--...++. |+.|.+++|.++.. ..+
T Consensus 177 ~-~mD~SLqll~ale~LnLshNk~~~v--~~Lr~l~~LkhLDlsyN~L~~vp~l~~~gc~-L~~L~lrnN~l~tL--~gi 250 (1096)
T KOG1859|consen 177 V-LMDESLQLLPALESLNLSHNKFTKV--DNLRRLPKLKHLDLSYNCLRHVPQLSMVGCK-LQLLNLRNNALTTL--RGI 250 (1096)
T ss_pred H-hHHHHHHHHHHhhhhccchhhhhhh--HHHHhcccccccccccchhccccccchhhhh-heeeeecccHHHhh--hhH
Confidence 7 5566777788999999999999864 3788899999999999998744333334444 99999999998743 357
Q ss_pred hcccCCCEEEccCCcCCccc-chhccCCCCCCEEEccCCcCc
Q 044615 287 EKLIHLSELDLSHNIFREEI-PSQICSMQSLEKLNLSHNNLS 327 (571)
Q Consensus 287 ~~l~~L~~L~Ls~n~l~~~~-~~~~~~l~~L~~L~Ls~n~l~ 327 (571)
.++.+|+.||+++|-+.+.- -..+..+..|..|+|.+|++-
T Consensus 251 e~LksL~~LDlsyNll~~hseL~pLwsLs~L~~L~LeGNPl~ 292 (1096)
T KOG1859|consen 251 ENLKSLYGLDLSYNLLSEHSELEPLWSLSSLIVLWLEGNPLC 292 (1096)
T ss_pred HhhhhhhccchhHhhhhcchhhhHHHHHHHHHHHhhcCCccc
Confidence 78899999999999876521 112456678899999999884
No 436
>KOG2982 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.49 E-value=2.3e-08 Score=92.78 Aligned_cols=79 Identities=19% Similarity=0.253 Sum_probs=43.0
Q ss_pred CCCcEEeCccCcCcCCC-ChhhhCCCCCCEEEcccCccccc-cchhhccCCCCCEEEcCCccCccCcch------hhhcc
Q 044615 218 SSLIQLTLNNNELSGQL-SPELGSLIQLEYLDLSANTFHKS-IPESLSNLVKLHYLNLSNNQFSQKIPN------KIEKL 289 (571)
Q Consensus 218 ~~L~~L~l~~n~l~~~~-~~~~~~l~~L~~L~L~~n~l~~~-~~~~l~~l~~L~~L~Ls~n~l~~~~~~------~~~~l 289 (571)
+++..+.+..|.+.... -..+..++.+..|+|+.|++... -.+.+.++++|..|.+++|.+...+.. .++.+
T Consensus 199 pnv~sv~v~e~PlK~~s~ek~se~~p~~~~LnL~~~~idswasvD~Ln~f~~l~dlRv~~~Pl~d~l~~~err~llIaRL 278 (418)
T KOG2982|consen 199 PNVNSVFVCEGPLKTESSEKGSEPFPSLSCLNLGANNIDSWASVDALNGFPQLVDLRVSENPLSDPLRGGERRFLLIARL 278 (418)
T ss_pred ccchheeeecCcccchhhcccCCCCCcchhhhhcccccccHHHHHHHcCCchhheeeccCCcccccccCCcceEEEEeec
Confidence 44555555555544321 12334455566666766666432 224466677777777777776543321 24556
Q ss_pred cCCCEEE
Q 044615 290 IHLSELD 296 (571)
Q Consensus 290 ~~L~~L~ 296 (571)
++++.|+
T Consensus 279 ~~v~vLN 285 (418)
T KOG2982|consen 279 TKVQVLN 285 (418)
T ss_pred cceEEec
Confidence 6777765
No 437
>TIGR03724 arch_bud32 Kae1-associated kinase Bud32. Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.
Probab=98.47 E-value=5e-07 Score=83.66 Aligned_cols=85 Identities=16% Similarity=0.171 Sum_probs=66.3
Q ss_pred eeeccCcceEEEEEcCCCCEEEEEEccCCCCCc-----hHhHHHHHHHHHHHhhcCCCCcccEEEEEEeCCeeEEEEecc
Q 044615 469 CIGNGGQGSVYKAKLPTGEIVDVKKFHSPLPDE-----MACQQEFLNEVNALTKIRHRNIVKFYGFCSHALHSFVVYEYL 543 (571)
Q Consensus 469 ~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~-----~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~ 543 (571)
.||+|+||.||+|.. ++..+++|......... .....++.+|++++..++|+++.....++...+..++||||+
T Consensus 1 ~ig~G~~~~vy~~~~-~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~~ 79 (199)
T TIGR03724 1 LIAKGAEAIIYLGDF-LGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDVDPDNKTIVMEYI 79 (199)
T ss_pred CCCCCceEEEEEeec-CCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEEE
Confidence 379999999999985 57889999865432211 112466889999999999988776666666777789999999
Q ss_pred CCCChhhhhcc
Q 044615 544 EMGSLAMNLSN 554 (571)
Q Consensus 544 ~~G~L~~~l~~ 554 (571)
+|++|.+.+..
T Consensus 80 ~g~~l~~~~~~ 90 (199)
T TIGR03724 80 EGKPLKDVIEE 90 (199)
T ss_pred CCccHHHHHhh
Confidence 99999988764
No 438
>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]
Probab=98.43 E-value=3.2e-09 Score=95.97 Aligned_cols=93 Identities=29% Similarity=0.452 Sum_probs=72.3
Q ss_pred cCCCccCeeeccCcceEEEEE-cCCCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhcCCCCcccEEEEEEeC-------
Q 044615 462 NNFDDGHCIGNGGQGSVYKAK-LPTGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKIRHRNIVKFYGFCSHA------- 533 (571)
Q Consensus 462 ~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~------- 533 (571)
+.|+...+||+|.||+||+|+ ..+|+.||+|++-...... +....-.+|++++..++|+|++.+++.|.+.
T Consensus 17 ~~yek~~kigqGtfgeVFkAr~~n~~kkvalkkvlmeneKe-GfpitalreikiL~~lkHenv~nliEic~tk~Tp~~r~ 95 (376)
T KOG0669|consen 17 SKYEKLAKIGQGTFGEVFKARSKNTGKKVALKKVLMENEKE-GFPITALREIKILQLLKHENVVNLIEICRTKATPTNRD 95 (376)
T ss_pred hHHHHHHhcCCchHHHHHHHhhcCccchhHHHHHHHhcccc-CCcHHHHHHHHHHHHhcchhHHHHHHHHhhccCCcccc
Confidence 457777889999999999999 5578889998764322221 2234467999999999999999999888542
Q ss_pred -CeeEEEEeccCCCChhhhhccCC
Q 044615 534 -LHSFVVYEYLEMGSLAMNLSNDA 556 (571)
Q Consensus 534 -~~~~lv~e~~~~G~L~~~l~~~~ 556 (571)
..+|+||++|+. ||+-.|.+..
T Consensus 96 r~t~ylVf~~ceh-DLaGlLsn~~ 118 (376)
T KOG0669|consen 96 RATFYLVFDFCEH-DLAGLLSNRK 118 (376)
T ss_pred cceeeeeHHHhhh-hHHHHhcCcc
Confidence 358999999997 8998887653
No 439
>COG5238 RNA1 Ran GTPase-activating protein (RanGAP) involved in mRNA processing and transport [Signal transduction mechanisms / RNA processing and modification]
Probab=98.42 E-value=8e-08 Score=88.08 Aligned_cols=211 Identities=21% Similarity=0.219 Sum_probs=118.6
Q ss_pred cCCCCCCEEecccCcCccc----ccccccCCCCCCEEEcccCcCc---cc-------ccccccCCCCCCeeecccCcCcc
Q 044615 94 GNMKSLSDLQLSENILNGS----IPLALGNLTNLVVLDLSTNKLS---GS-------IPLSFANLTSLSILYLYENSLCD 159 (571)
Q Consensus 94 ~~l~~L~~L~L~~n~i~~~----~~~~~~~l~~L~~L~L~~n~i~---~~-------~~~~~~~l~~L~~L~L~~n~l~~ 159 (571)
.-+..++.++||+|-|... +...+.+-.+|+..+++.-... .. ..+.+.++|.|+..+|+.|.+..
T Consensus 27 ~~~d~~~evdLSGNtigtEA~e~l~~~ia~~~~L~vvnfsd~ftgr~kde~~~~L~~Ll~aLlkcp~l~~v~LSDNAfg~ 106 (388)
T COG5238 27 EMMDELVEVDLSGNTIGTEAMEELCNVIANVRNLRVVNFSDAFTGRDKDELYSNLVMLLKALLKCPRLQKVDLSDNAFGS 106 (388)
T ss_pred HhhcceeEEeccCCcccHHHHHHHHHHHhhhcceeEeehhhhhhcccHHHHHHHHHHHHHHHhcCCcceeeeccccccCc
Confidence 3456677777777776543 2334445566776666653211 11 22235567777777777777765
Q ss_pred cCCcc----ccCCCCCCEEEccCCCCCccCChhhh----hc--------cCCCcEEEccCCcccccCC----ccccCCCC
Q 044615 160 SIPKE----IGNMNSLSILDLSSNKLNGSIPLSLA----NL--------TNSLKVLYLSSNHIVGEIP----LGHGMLSS 219 (571)
Q Consensus 160 ~~~~~----l~~l~~L~~L~L~~n~l~~~~p~~~~----~l--------~~~L~~L~l~~n~~~~~~~----~~~~~l~~ 219 (571)
..|+. ++.-+.|.+|.+++|.+.-.-...++ ++ .+.|++.....|++..... ..+..-..
T Consensus 107 ~~~e~L~d~is~~t~l~HL~l~NnGlGp~aG~rigkal~~la~nKKaa~kp~Le~vicgrNRlengs~~~~a~~l~sh~~ 186 (388)
T COG5238 107 EFPEELGDLISSSTDLVHLKLNNNGLGPIAGGRIGKALFHLAYNKKAADKPKLEVVICGRNRLENGSKELSAALLESHEN 186 (388)
T ss_pred ccchHHHHHHhcCCCceeEEeecCCCCccchhHHHHHHHHHHHHhhhccCCCceEEEeccchhccCcHHHHHHHHHhhcC
Confidence 55543 45566777777777766421111111 11 1237777777777652211 11222246
Q ss_pred CcEEeCccCcCcCCCCh-----hhhCCCCCCEEEcccCccccc----cchhhccCCCCCEEEcCCccCccCcchhh----
Q 044615 220 LIQLTLNNNELSGQLSP-----ELGSLIQLEYLDLSANTFHKS----IPESLSNLVKLHYLNLSNNQFSQKIPNKI---- 286 (571)
Q Consensus 220 L~~L~l~~n~l~~~~~~-----~~~~l~~L~~L~L~~n~l~~~----~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~---- 286 (571)
|+.+.+..|.|...... .+..+.+|+.|||..|.++.. +...+..++.|+.|.+.+|.++......+
T Consensus 187 lk~vki~qNgIrpegv~~L~~~gl~y~~~LevLDlqDNtft~~gS~~La~al~~W~~lrEL~lnDClls~~G~~~v~~~f 266 (388)
T COG5238 187 LKEVKIQQNGIRPEGVTMLAFLGLFYSHSLEVLDLQDNTFTLEGSRYLADALCEWNLLRELRLNDCLLSNEGVKSVLRRF 266 (388)
T ss_pred ceeEEeeecCcCcchhHHHHHHHHHHhCcceeeeccccchhhhhHHHHHHHhcccchhhhccccchhhccccHHHHHHHh
Confidence 77777777776533221 233467788888888877532 23345566677888888887765433322
Q ss_pred --hcccCCCEEEccCCcCCc
Q 044615 287 --EKLIHLSELDLSHNIFRE 304 (571)
Q Consensus 287 --~~l~~L~~L~Ls~n~l~~ 304 (571)
...|+|..|...+|.+.+
T Consensus 267 ~e~~~p~l~~L~~~Yne~~~ 286 (388)
T COG5238 267 NEKFVPNLMPLPGDYNERRG 286 (388)
T ss_pred hhhcCCCccccccchhhhcC
Confidence 124567777777776544
No 440
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=98.36 E-value=1.6e-06 Score=93.00 Aligned_cols=91 Identities=16% Similarity=0.104 Sum_probs=68.5
Q ss_pred cCCCccCeeeccCcceEEEEEcCCCCEEEEEEccCCC-CC----chHhHHHHHHHHHHHhhcCCCCcccEEEEEEeCCee
Q 044615 462 NNFDDGHCIGNGGQGSVYKAKLPTGEIVDVKKFHSPL-PD----EMACQQEFLNEVNALTKIRHRNIVKFYGFCSHALHS 536 (571)
Q Consensus 462 ~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~-~~----~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~ 536 (571)
..|...+.||+|+||.||+|..... .+++|+..... .. .....+++.+|++++..++|++++....++.+....
T Consensus 333 ~~~~~~~~iG~G~~g~Vy~~~~~~~-~~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~ 411 (535)
T PRK09605 333 RRKIPDHLIGKGAEADIKKGEYLGR-DAVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVPTPVIYDVDPEEK 411 (535)
T ss_pred cccCccceeccCCcEEEEEEeecCc-cceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCCeeEEEEEeCCCC
Confidence 3456678999999999999986443 34444332211 11 112245689999999999999999888888887788
Q ss_pred EEEEeccCCCChhhhhc
Q 044615 537 FVVYEYLEMGSLAMNLS 553 (571)
Q Consensus 537 ~lv~e~~~~G~L~~~l~ 553 (571)
++||||+++++|.+++.
T Consensus 412 ~lv~E~~~g~~L~~~l~ 428 (535)
T PRK09605 412 TIVMEYIGGKDLKDVLE 428 (535)
T ss_pred EEEEEecCCCcHHHHHH
Confidence 99999999999998875
No 441
>KOG2120 consensus SCF ubiquitin ligase, Skp2 component [Posttranslational modification, protein turnover, chaperones]
Probab=98.36 E-value=1.2e-08 Score=94.49 Aligned_cols=180 Identities=23% Similarity=0.171 Sum_probs=85.3
Q ss_pred CCCEEecccCcCccc-ccccccCCCCCCEEEcccCcCcccccccccCCCCCCeeecccCcCcccCC--ccccCCCCCCEE
Q 044615 98 SLSDLQLSENILNGS-IPLALGNLTNLVVLDLSTNKLSGSIPLSFANLTSLSILYLYENSLCDSIP--KEIGNMNSLSIL 174 (571)
Q Consensus 98 ~L~~L~L~~n~i~~~-~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~--~~l~~l~~L~~L 174 (571)
.|++|||+...|+.. .-.-+..+++|+.|.|.++.+...+...+++-.+|+.|+|+.+.=-.... --+.+++.|+.|
T Consensus 186 Rlq~lDLS~s~it~stl~~iLs~C~kLk~lSlEg~~LdD~I~~~iAkN~~L~~lnlsm~sG~t~n~~~ll~~scs~L~~L 265 (419)
T KOG2120|consen 186 RLQHLDLSNSVITVSTLHGILSQCSKLKNLSLEGLRLDDPIVNTIAKNSNLVRLNLSMCSGFTENALQLLLSSCSRLDEL 265 (419)
T ss_pred hhHHhhcchhheeHHHHHHHHHHHHhhhhccccccccCcHHHHHHhccccceeeccccccccchhHHHHHHHhhhhHhhc
Confidence 356666666555421 12223445566666666666665555555666666666665543111000 113455666666
Q ss_pred EccCCCCCccCC-hhhhhccCCCcEEEccCCcccccCCccccCCCCCcEEeCccCcCcCCCChhhhCCCCCCEEEcccCc
Q 044615 175 DLSSNKLNGSIP-LSLANLTNSLKVLYLSSNHIVGEIPLGHGMLSSLIQLTLNNNELSGQLSPELGSLIQLEYLDLSANT 253 (571)
Q Consensus 175 ~L~~n~l~~~~p-~~~~~l~~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~ 253 (571)
+|++|.+....- ..+.+...+|+.|+++++.-.- ....+..-...+|+|.+|||+.|.
T Consensus 266 NlsWc~l~~~~Vtv~V~hise~l~~LNlsG~rrnl---------------------~~sh~~tL~~rcp~l~~LDLSD~v 324 (419)
T KOG2120|consen 266 NLSWCFLFTEKVTVAVAHISETLTQLNLSGYRRNL---------------------QKSHLSTLVRRCPNLVHLDLSDSV 324 (419)
T ss_pred CchHhhccchhhhHHHhhhchhhhhhhhhhhHhhh---------------------hhhHHHHHHHhCCceeeecccccc
Confidence 666665543211 1122233335555555433210 000111112345666666666543
Q ss_pred -cccccchhhccCCCCCEEEcCCccCccCcchh---hhcccCCCEEEccCC
Q 044615 254 -FHKSIPESLSNLVKLHYLNLSNNQFSQKIPNK---IEKLIHLSELDLSHN 300 (571)
Q Consensus 254 -l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~---~~~l~~L~~L~Ls~n 300 (571)
++......|.+++.|++|.++.|.. .+|.. +...|.|.+|++.++
T Consensus 325 ~l~~~~~~~~~kf~~L~~lSlsRCY~--i~p~~~~~l~s~psl~yLdv~g~ 373 (419)
T KOG2120|consen 325 MLKNDCFQEFFKFNYLQHLSLSRCYD--IIPETLLELNSKPSLVYLDVFGC 373 (419)
T ss_pred ccCchHHHHHHhcchheeeehhhhcC--CChHHeeeeccCcceEEEEeccc
Confidence 3323334455566666666666653 34443 234456666666554
No 442
>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom
Probab=98.34 E-value=1.4e-06 Score=80.56 Aligned_cols=95 Identities=21% Similarity=0.143 Sum_probs=67.6
Q ss_pred HHHHHHccCCCccCeeeccCcceEEEEEcCCCCEEEEEEccCCCCCch-------------------HhHHHHHHHHHHH
Q 044615 455 EEIIRATNNFDDGHCIGNGGQGSVYKAKLPTGEIVDVKKFHSPLPDEM-------------------ACQQEFLNEVNAL 515 (571)
Q Consensus 455 ~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~-------------------~~~~~~~~Ei~~l 515 (571)
+++.....-|...+.||+|+||.||++..++|+.||||++........ .....+.+|+.++
T Consensus 8 ~~~~~~~~~~~~~~~i~~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l 87 (198)
T cd05144 8 HTLVKRGVVESLGNQIGVGKESDVYLALDPDGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAAL 87 (198)
T ss_pred HHHHHcCchhhcCCccccCcceEEEEEEcCCCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHH
Confidence 344444444788899999999999999987899999998765331100 0112367899999
Q ss_pred hhcCCCC--cccEEEEEEeCCeeEEEEeccCCCChhhhhc
Q 044615 516 TKIRHRN--IVKFYGFCSHALHSFVVYEYLEMGSLAMNLS 553 (571)
Q Consensus 516 ~~l~H~n--iv~l~~~~~~~~~~~lv~e~~~~G~L~~~l~ 553 (571)
..+.|++ +++.++ ....++||||++|++|.+...
T Consensus 88 ~~l~~~~i~v~~~~~----~~~~~lv~e~~~g~~L~~~~~ 123 (198)
T cd05144 88 KALYEEGFPVPKPID----WNRHAVVMEYIDGVELYRVRV 123 (198)
T ss_pred HHHHHcCCCCCceee----cCCceEEEEEeCCcchhhccc
Confidence 9998874 444443 244589999999999977653
No 443
>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]
Probab=98.33 E-value=1e-07 Score=87.14 Aligned_cols=84 Identities=31% Similarity=0.410 Sum_probs=68.5
Q ss_pred CccCeeeccCcceEEEEE-cCCCCEEEEEEccCCCCCchHhHHHHHHHHHH-HhhcCCCCcccEEEEEEeCCeeEEEEec
Q 044615 465 DDGHCIGNGGQGSVYKAK-LPTGEIVDVKKFHSPLPDEMACQQEFLNEVNA-LTKIRHRNIVKFYGFCSHALHSFVVYEY 542 (571)
Q Consensus 465 ~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~-l~~l~H~niv~l~~~~~~~~~~~lv~e~ 542 (571)
+....||.|+||+|++.. .++|+..|||+|+.... .+..+++..|.+. ++.-+.||||+++|++...+..||-||.
T Consensus 67 qdlg~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~--~keq~rll~e~d~~mks~~cp~IVkfyGa~F~EGdcWiCMEL 144 (361)
T KOG1006|consen 67 QDLGEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNI--EKEQKRLLMEHDTVMKSSNCPNIVKFYGALFSEGDCWICMEL 144 (361)
T ss_pred HHHHHhcCCcchhhhhhhcCccCcEEEEEEeeeccc--hHHHHHHHHHHHHHHhhcCCcHHHHHhhhhhcCCceeeeHHH
Confidence 344679999999999998 56899999999986543 3557889999865 6666899999999999999999999999
Q ss_pred cCCCChhhh
Q 044615 543 LEMGSLAMN 551 (571)
Q Consensus 543 ~~~G~L~~~ 551 (571)
|.- ++..+
T Consensus 145 Md~-SlDkl 152 (361)
T KOG1006|consen 145 MDI-SLDKL 152 (361)
T ss_pred Hhh-hHHHH
Confidence 974 55433
No 444
>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]
Probab=98.33 E-value=1.4e-07 Score=87.79 Aligned_cols=90 Identities=20% Similarity=0.236 Sum_probs=71.3
Q ss_pred HccCCCcc-CeeeccCcceEEEEE-cCCCCEEEEEEccCCCCCchHhHHHHHHHHHHHhh-cCCCCcccEEEEEEe----
Q 044615 460 ATNNFDDG-HCIGNGGQGSVYKAK-LPTGEIVDVKKFHSPLPDEMACQQEFLNEVNALTK-IRHRNIVKFYGFCSH---- 532 (571)
Q Consensus 460 ~~~~~~~~-~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~-l~H~niv~l~~~~~~---- 532 (571)
.+++|.+. .+||-|-.|+|..+. ..+++.+|+|++... ....+|+++.-. -.|||||.++++|+.
T Consensus 59 itedY~is~qvLG~GinGkV~~C~~k~T~ekfALKvL~Ds--------~KARrEVeLHw~~s~h~~iV~IidVyeNs~~~ 130 (400)
T KOG0604|consen 59 ITEDYSISWQVLGAGINGKVVQCVHKRTQEKFALKVLLDS--------PKARREVELHWMASGHPHIVSIIDVYENSYQG 130 (400)
T ss_pred chhhheehhhhhccccCCceEEEEeccchhhhHHHHHhcC--------HHHHhHhhhhhhhcCCCceEEeehhhhhhccC
Confidence 45567654 579999999999998 558999999998632 334588887544 479999999999864
Q ss_pred CCeeEEEEeccCCCChhhhhccCCC
Q 044615 533 ALHSFVVYEYLEMGSLAMNLSNDAA 557 (571)
Q Consensus 533 ~~~~~lv~e~~~~G~L~~~l~~~~~ 557 (571)
...+.+|||+|+||+|+..+++++.
T Consensus 131 rkcLLiVmE~meGGeLfsriq~~g~ 155 (400)
T KOG0604|consen 131 RKCLLIVMECMEGGELFSRIQDRGD 155 (400)
T ss_pred ceeeEeeeecccchHHHHHHHHccc
Confidence 3467899999999999999987643
No 445
>smart00090 RIO RIO-like kinase.
Probab=98.23 E-value=3.4e-06 Score=79.94 Aligned_cols=86 Identities=19% Similarity=0.188 Sum_probs=62.4
Q ss_pred CCCccCeeeccCcceEEEEE--cCCCCEEEEEEccCCCCCc-------------------h--HhHHHHHHHHHHHhhcC
Q 044615 463 NFDDGHCIGNGGQGSVYKAK--LPTGEIVDVKKFHSPLPDE-------------------M--ACQQEFLNEVNALTKIR 519 (571)
Q Consensus 463 ~~~~~~~lg~G~~g~V~~~~--~~~~~~vavK~~~~~~~~~-------------------~--~~~~~~~~Ei~~l~~l~ 519 (571)
.|.+.+.||+|+||.||+|. ..+|+.||||.+....... . .....+.+|++.+.++.
T Consensus 29 ~~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~L~ 108 (237)
T smart00090 29 LSAIGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQRLY 108 (237)
T ss_pred hHHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 57888999999999999998 5689999999987543110 0 01234678999999997
Q ss_pred CCC--cccEEEEEEeCCeeEEEEeccCCCChhhhh
Q 044615 520 HRN--IVKFYGFCSHALHSFVVYEYLEMGSLAMNL 552 (571)
Q Consensus 520 H~n--iv~l~~~~~~~~~~~lv~e~~~~G~L~~~l 552 (571)
+.. +.++++ . ...++||||++++++....
T Consensus 109 ~~~i~~p~~~~---~-~~~~lV~E~~~g~~L~~~~ 139 (237)
T smart00090 109 EAGVPVPKPIA---W-RRNVLVMEFIGGDGLPAPR 139 (237)
T ss_pred hcCCCCCeeeE---e-cCceEEEEEecCCcccccc
Confidence 643 333333 2 2358999999999887655
No 446
>KOG4579 consensus Leucine-rich repeat (LRR) protein associated with apoptosis in muscle tissue [General function prediction only]
Probab=98.22 E-value=6.5e-08 Score=79.56 Aligned_cols=105 Identities=28% Similarity=0.276 Sum_probs=59.1
Q ss_pred CCEEecccCcCcccccccc---cCCCCCCEEEcccCcCcccccccccCCCCCCeeecccCcCcccCCccccCCCCCCEEE
Q 044615 99 LSDLQLSENILNGSIPLAL---GNLTNLVVLDLSTNKLSGSIPLSFANLTSLSILYLYENSLCDSIPKEIGNMNSLSILD 175 (571)
Q Consensus 99 L~~L~L~~n~i~~~~~~~~---~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~ 175 (571)
+..+||+.+++. .+++.. .....|...+|++|.+....+..-...+.+++|+|++|.++ .+|.++..++.|+.|+
T Consensus 29 ~h~ldLssc~lm-~i~davy~l~~~~el~~i~ls~N~fk~fp~kft~kf~t~t~lNl~~neis-dvPeE~Aam~aLr~lN 106 (177)
T KOG4579|consen 29 LHFLDLSSCQLM-YIADAVYMLSKGYELTKISLSDNGFKKFPKKFTIKFPTATTLNLANNEIS-DVPEELAAMPALRSLN 106 (177)
T ss_pred hhhcccccchhh-HHHHHHHHHhCCceEEEEecccchhhhCCHHHhhccchhhhhhcchhhhh-hchHHHhhhHHhhhcc
Confidence 455666666654 233332 33344555566666665333333334446666666666665 3565666666666666
Q ss_pred ccCCCCCccCChhhhhccCCCcEEEccCCccc
Q 044615 176 LSSNKLNGSIPLSLANLTNSLKVLYLSSNHIV 207 (571)
Q Consensus 176 L~~n~l~~~~p~~~~~l~~~L~~L~l~~n~~~ 207 (571)
++.|.+. ..|.-+..+.+ +..|+..+|.+.
T Consensus 107 l~~N~l~-~~p~vi~~L~~-l~~Lds~~na~~ 136 (177)
T KOG4579|consen 107 LRFNPLN-AEPRVIAPLIK-LDMLDSPENARA 136 (177)
T ss_pred cccCccc-cchHHHHHHHh-HHHhcCCCCccc
Confidence 6666665 45555555554 666666665554
No 447
>COG5238 RNA1 Ran GTPase-activating protein (RanGAP) involved in mRNA processing and transport [Signal transduction mechanisms / RNA processing and modification]
Probab=98.09 E-value=3.1e-06 Score=77.89 Aligned_cols=223 Identities=23% Similarity=0.241 Sum_probs=119.8
Q ss_pred ccCCCCCCEEEcccCcCcccc----cccccCCCCCCeeecccCcCc---ccCC-------ccccCCCCCCEEEccCCCCC
Q 044615 117 LGNLTNLVVLDLSTNKLSGSI----PLSFANLTSLSILYLYENSLC---DSIP-------KEIGNMNSLSILDLSSNKLN 182 (571)
Q Consensus 117 ~~~l~~L~~L~L~~n~i~~~~----~~~~~~l~~L~~L~L~~n~l~---~~~~-------~~l~~l~~L~~L~L~~n~l~ 182 (571)
+..+..+..++|++|.|...- ...+.+-.+|+..+++.-... +.++ ..+.++|.|+..+|++|.+.
T Consensus 26 l~~~d~~~evdLSGNtigtEA~e~l~~~ia~~~~L~vvnfsd~ftgr~kde~~~~L~~Ll~aLlkcp~l~~v~LSDNAfg 105 (388)
T COG5238 26 LEMMDELVEVDLSGNTIGTEAMEELCNVIANVRNLRVVNFSDAFTGRDKDELYSNLVMLLKALLKCPRLQKVDLSDNAFG 105 (388)
T ss_pred HHhhcceeEEeccCCcccHHHHHHHHHHHhhhcceeEeehhhhhhcccHHHHHHHHHHHHHHHhcCCcceeeeccccccC
Confidence 344678899999999987543 334556678888887654322 1112 24567888888888888887
Q ss_pred ccCChhhhhc----cCCCcEEEccCCcccccCCccccCCCCCcEEeCccCcCcCCCChhhhCCCCCCEEEcccCcccccc
Q 044615 183 GSIPLSLANL----TNSLKVLYLSSNHIVGEIPLGHGMLSSLIQLTLNNNELSGQLSPELGSLIQLEYLDLSANTFHKSI 258 (571)
Q Consensus 183 ~~~p~~~~~l----~~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~ 258 (571)
...|..+..+ ++ |.+|.+++|.+...-...++. .|.. |..| .-..+-|.|+......|++..-.
T Consensus 106 ~~~~e~L~d~is~~t~-l~HL~l~NnGlGp~aG~rigk--al~~--la~n-------KKaa~kp~Le~vicgrNRlengs 173 (388)
T COG5238 106 SEFPEELGDLISSSTD-LVHLKLNNNGLGPIAGGRIGK--ALFH--LAYN-------KKAADKPKLEVVICGRNRLENGS 173 (388)
T ss_pred cccchHHHHHHhcCCC-ceeEEeecCCCCccchhHHHH--HHHH--HHHH-------hhhccCCCceEEEeccchhccCc
Confidence 6666554432 33 666666666553211111110 0000 0000 01123356667777766654221
Q ss_pred c----hhhccCCCCCEEEcCCccCccCcc-----hhhhcccCCCEEEccCCcCCcc----cchhccCCCCCCEEEccCCc
Q 044615 259 P----ESLSNLVKLHYLNLSNNQFSQKIP-----NKIEKLIHLSELDLSHNIFREE----IPSQICSMQSLEKLNLSHNN 325 (571)
Q Consensus 259 ~----~~l~~l~~L~~L~Ls~n~l~~~~~-----~~~~~l~~L~~L~Ls~n~l~~~----~~~~~~~l~~L~~L~Ls~n~ 325 (571)
. ..+..-.+|+.+.+..|.|....- ..+..+.+|+.|||.+|-++-. +...++.++.|++|.+..|-
T Consensus 174 ~~~~a~~l~sh~~lk~vki~qNgIrpegv~~L~~~gl~y~~~LevLDlqDNtft~~gS~~La~al~~W~~lrEL~lnDCl 253 (388)
T COG5238 174 KELSAALLESHENLKEVKIQQNGIRPEGVTMLAFLGLFYSHSLEVLDLQDNTFTLEGSRYLADALCEWNLLRELRLNDCL 253 (388)
T ss_pred HHHHHHHHHhhcCceeEEeeecCcCcchhHHHHHHHHHHhCcceeeeccccchhhhhHHHHHHHhcccchhhhccccchh
Confidence 1 112223466777777776542211 1123345677777777766532 23345666777888887777
Q ss_pred Cccccccc----cc--cCCCCCEEECcCCcCc
Q 044615 326 LSGSIPRC----FE--EMHWLSCIDISYNALQ 351 (571)
Q Consensus 326 l~~~~p~~----~~--~l~~L~~L~ls~N~l~ 351 (571)
++..-... |. ..++|..|-..+|-..
T Consensus 254 ls~~G~~~v~~~f~e~~~p~l~~L~~~Yne~~ 285 (388)
T COG5238 254 LSNEGVKSVLRRFNEKFVPNLMPLPGDYNERR 285 (388)
T ss_pred hccccHHHHHHHhhhhcCCCccccccchhhhc
Confidence 76433322 22 1345555555555443
No 448
>KOG2120 consensus SCF ubiquitin ligase, Skp2 component [Posttranslational modification, protein turnover, chaperones]
Probab=98.07 E-value=1.5e-07 Score=87.57 Aligned_cols=80 Identities=19% Similarity=0.130 Sum_probs=42.4
Q ss_pred CCCCEEEccCCccc-------cCCCCccceeecccccccCCCCCCCccccccccCCCCCCEEecccCc-Cccc-cccccc
Q 044615 48 VQARDTSISFDELH-------EKLLTFEATAHFSVLAFTGQDWPLYSSIPDEIGNMKSLSDLQLSENI-LNGS-IPLALG 118 (571)
Q Consensus 48 ~~l~~l~l~~n~l~-------~~~l~~l~~l~l~~n~l~~~~~~~~~~~p~~~~~l~~L~~L~L~~n~-i~~~-~~~~~~ 118 (571)
+.++++|||...++ .+.+.+|+-|.|.++.+.+ .+-..++.-.+|+.|+|+.+. ++.. ..--+.
T Consensus 185 sRlq~lDLS~s~it~stl~~iLs~C~kLk~lSlEg~~LdD-------~I~~~iAkN~~L~~lnlsm~sG~t~n~~~ll~~ 257 (419)
T KOG2120|consen 185 SRLQHLDLSNSVITVSTLHGILSQCSKLKNLSLEGLRLDD-------PIVNTIAKNSNLVRLNLSMCSGFTENALQLLLS 257 (419)
T ss_pred hhhHHhhcchhheeHHHHHHHHHHHHhhhhccccccccCc-------HHHHHHhccccceeeccccccccchhHHHHHHH
Confidence 34666666666555 3445556666666666655 444455555666666666542 2211 111234
Q ss_pred CCCCCCEEEcccCcCc
Q 044615 119 NLTNLVVLDLSTNKLS 134 (571)
Q Consensus 119 ~l~~L~~L~L~~n~i~ 134 (571)
+++.|..|+|+.|.+.
T Consensus 258 scs~L~~LNlsWc~l~ 273 (419)
T KOG2120|consen 258 SCSRLDELNLSWCFLF 273 (419)
T ss_pred hhhhHhhcCchHhhcc
Confidence 5566666666666554
No 449
>PRK15386 type III secretion protein GogB; Provisional
Probab=98.05 E-value=1.4e-05 Score=79.86 Aligned_cols=92 Identities=18% Similarity=0.308 Sum_probs=47.0
Q ss_pred cCCCCCCEEecccCcCcccccccccCCCCCCEEEcccCcCcccccccccCCCCCCeeecccCcCcccCCccccCCCCCCE
Q 044615 94 GNMKSLSDLQLSENILNGSIPLALGNLTNLVVLDLSTNKLSGSIPLSFANLTSLSILYLYENSLCDSIPKEIGNMNSLSI 173 (571)
Q Consensus 94 ~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~ 173 (571)
..+.+++.|++++|.++ .+|. + -.+|++|++++|.--..+|..+ .++|++|++++|.....+|. +|+.
T Consensus 49 ~~~~~l~~L~Is~c~L~-sLP~-L--P~sLtsL~Lsnc~nLtsLP~~L--P~nLe~L~Ls~Cs~L~sLP~------sLe~ 116 (426)
T PRK15386 49 EEARASGRLYIKDCDIE-SLPV-L--PNELTEITIENCNNLTTLPGSI--PEGLEKLTVCHCPEISGLPE------SVRS 116 (426)
T ss_pred HHhcCCCEEEeCCCCCc-ccCC-C--CCCCcEEEccCCCCcccCCchh--hhhhhheEccCccccccccc------ccce
Confidence 34567777777777665 3441 1 1357777776644333445433 24667777766632223332 3555
Q ss_pred EEccCCCCCccCChhhhhccCCCcEEEcc
Q 044615 174 LDLSSNKLNGSIPLSLANLTNSLKVLYLS 202 (571)
Q Consensus 174 L~L~~n~l~~~~p~~~~~l~~~L~~L~l~ 202 (571)
|++..+... .+..++++|+.|.+.
T Consensus 117 L~L~~n~~~-----~L~~LPssLk~L~I~ 140 (426)
T PRK15386 117 LEIKGSATD-----SIKNVPNGLTSLSIN 140 (426)
T ss_pred EEeCCCCCc-----ccccCcchHhheecc
Confidence 555544432 122344445555553
No 450
>KOG4579 consensus Leucine-rich repeat (LRR) protein associated with apoptosis in muscle tissue [General function prediction only]
Probab=98.03 E-value=4.1e-07 Score=74.95 Aligned_cols=57 Identities=32% Similarity=0.471 Sum_probs=22.4
Q ss_pred CcEEeCccCcCcCCCChhhhCCCCCCEEEcccCccccccchhhccCCCCCEEEcCCccC
Q 044615 220 LIQLTLNNNELSGQLSPELGSLIQLEYLDLSANTFHKSIPESLSNLVKLHYLNLSNNQF 278 (571)
Q Consensus 220 L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~n~l 278 (571)
++.|++++|.++ .+|.++..++.|+.|+++.|.+. ..|..+..+.+|-.|+..+|.+
T Consensus 79 ~t~lNl~~neis-dvPeE~Aam~aLr~lNl~~N~l~-~~p~vi~~L~~l~~Lds~~na~ 135 (177)
T KOG4579|consen 79 ATTLNLANNEIS-DVPEELAAMPALRSLNLRFNPLN-AEPRVIAPLIKLDMLDSPENAR 135 (177)
T ss_pred hhhhhcchhhhh-hchHHHhhhHHhhhcccccCccc-cchHHHHHHHhHHHhcCCCCcc
Confidence 333444444443 23333444444444444444443 2233333344444444444433
No 451
>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]
Probab=98.03 E-value=3e-07 Score=91.33 Aligned_cols=95 Identities=19% Similarity=0.221 Sum_probs=82.2
Q ss_pred cCCCccCeeeccCcceEEEEEcCC-CCEEEEEEccCCCCCchHhHHHHHHHHHHHhhcCCCCcccEEEEEEeCCeeEEEE
Q 044615 462 NNFDDGHCIGNGGQGSVYKAKLPT-GEIVDVKKFHSPLPDEMACQQEFLNEVNALTKIRHRNIVKFYGFCSHALHSFVVY 540 (571)
Q Consensus 462 ~~~~~~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~ 540 (571)
.+++.+..+|-||||.|-.+.... ...+|+|++++...-+.+..+++..|-.+|..++.|.||++|..|.+..+.|++|
T Consensus 420 ~dl~~iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s~fIvrLYrTfrd~kyvYmLm 499 (732)
T KOG0614|consen 420 SDLKRIATLGVGGFGRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMECRSDFIVRLYRTFRDSKYVYMLM 499 (732)
T ss_pred hhhhhhhhcccCccceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcCchHHHHHHHHhccchhhhhhH
Confidence 456677889999999999888543 3458999998776666667788999999999999999999999999999999999
Q ss_pred eccCCCChhhhhccCC
Q 044615 541 EYLEMGSLAMNLSNDA 556 (571)
Q Consensus 541 e~~~~G~L~~~l~~~~ 556 (571)
|-|-||++-..+++++
T Consensus 500 EaClGGElWTiLrdRg 515 (732)
T KOG0614|consen 500 EACLGGELWTILRDRG 515 (732)
T ss_pred HhhcCchhhhhhhhcC
Confidence 9999999999998654
No 452
>PLN03225 Serine/threonine-protein kinase SNT7; Provisional
Probab=98.01 E-value=8.6e-06 Score=87.43 Aligned_cols=89 Identities=21% Similarity=0.243 Sum_probs=59.3
Q ss_pred HccCCCccCeeeccCcceEEEEEc-CC----CCEEEEEEccCCCCCchHhHHHHHHHHHHHhhcCCCCcccEEEE-----
Q 044615 460 ATNNFDDGHCIGNGGQGSVYKAKL-PT----GEIVDVKKFHSPLPDEMACQQEFLNEVNALTKIRHRNIVKFYGF----- 529 (571)
Q Consensus 460 ~~~~~~~~~~lg~G~~g~V~~~~~-~~----~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~----- 529 (571)
..++|+..+.||+|+||.||+|.. .+ +..||||++...... +.+..| .+.+..+.+++.+...
T Consensus 130 ~~~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~~~-----e~~~~e--~l~~~~~~~~~~~~~~~~~~~ 202 (566)
T PLN03225 130 KKDDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYGAV-----EIWMNE--RVRRACPNSCADFVYGFLEPV 202 (566)
T ss_pred ccCCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccchh-----HHHHHH--HHHhhchhhHHHHHHhhhccc
Confidence 467899999999999999999994 45 789999997643211 112222 1122222222222211
Q ss_pred -EEeCCeeEEEEeccCCCChhhhhccC
Q 044615 530 -CSHALHSFVVYEYLEMGSLAMNLSND 555 (571)
Q Consensus 530 -~~~~~~~~lv~e~~~~G~L~~~l~~~ 555 (571)
+......++||||+++|+|.++++..
T Consensus 203 ~~~~~~~~~LV~ey~~~gsL~~~l~~~ 229 (566)
T PLN03225 203 SSKKEDEYWLVWRYEGESTLADLMQSK 229 (566)
T ss_pred ccccCCceEEEEEecCCCcHHHHHHhc
Confidence 23556789999999999999998754
No 453
>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family. The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves
Probab=97.98 E-value=1.7e-05 Score=69.42 Aligned_cols=79 Identities=18% Similarity=0.081 Sum_probs=65.1
Q ss_pred ccCeeeccCcceEEEEEcCCCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhcCC--CCcccEEEEEEeCCeeEEEEecc
Q 044615 466 DGHCIGNGGQGSVYKAKLPTGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKIRH--RNIVKFYGFCSHALHSFVVYEYL 543 (571)
Q Consensus 466 ~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~H--~niv~l~~~~~~~~~~~lv~e~~ 543 (571)
+.+.+|+|.++.||++.... ..+++|....... ...+.+|+..+..++| +.++++++++...+..+++|||+
T Consensus 2 ~~~~i~~g~~~~v~~~~~~~-~~~~iK~~~~~~~-----~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~~~~~~~v~e~~ 75 (155)
T cd05120 2 SIKLLKGGLTNRVYLLGTKD-EDYVLKINPSREK-----GADREREVAILQLLARKGLPVPKVLASGESDGWSYLLMEWI 75 (155)
T ss_pred cceecccccccceEEEEecC-CeEEEEecCCCCc-----hhHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCccEEEEEec
Confidence 34679999999999999744 7899999865432 3568899999999977 58999999888878899999999
Q ss_pred CCCChhh
Q 044615 544 EMGSLAM 550 (571)
Q Consensus 544 ~~G~L~~ 550 (571)
+++.+..
T Consensus 76 ~g~~~~~ 82 (155)
T cd05120 76 EGETLDE 82 (155)
T ss_pred CCeeccc
Confidence 9987764
No 454
>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=97.97 E-value=1.9e-05 Score=78.53 Aligned_cols=90 Identities=20% Similarity=0.285 Sum_probs=72.2
Q ss_pred HccCCCccCeeeccCcceEEEEE-cCCCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhcC-----C---CCcccEEEEE
Q 044615 460 ATNNFDDGHCIGNGGQGSVYKAK-LPTGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKIR-----H---RNIVKFYGFC 530 (571)
Q Consensus 460 ~~~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~-----H---~niv~l~~~~ 530 (571)
..+.|.+.++||-|.|++||.|. ..+.+.||+|+.+... ...+.-+.||++|++++ | ..||+++++|
T Consensus 76 ~~gRY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKSAq----hYtEaAlDEIklL~~v~~~Dp~~~~~~~VV~LlD~F 151 (590)
T KOG1290|consen 76 NGGRYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKSAQ----HYTEAALDEIKLLQQVREGDPNDPGKKCVVQLLDHF 151 (590)
T ss_pred cCceEEEEEeccccccceeEEEeeccCCeEEEEEEEehhh----HHHHHHHHHHHHHHHHHhcCCCCCCCceeeeeeccc
Confidence 34679999999999999999998 6678899999986432 23456789999998873 3 3699999999
Q ss_pred Ee----CCeeEEEEeccCCCChhhhhcc
Q 044615 531 SH----ALHSFVVYEYLEMGSLAMNLSN 554 (571)
Q Consensus 531 ~~----~~~~~lv~e~~~~G~L~~~l~~ 554 (571)
.. +.+++||+|++ |-+|..+|+.
T Consensus 152 khsGpNG~HVCMVfEvL-GdnLLklI~~ 178 (590)
T KOG1290|consen 152 KHSGPNGQHVCMVFEVL-GDNLLKLIKY 178 (590)
T ss_pred eecCCCCcEEEEEehhh-hhHHHHHHHH
Confidence 75 35799999988 5588888874
No 455
>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]
Probab=97.96 E-value=6.3e-06 Score=87.08 Aligned_cols=84 Identities=20% Similarity=0.362 Sum_probs=69.4
Q ss_pred CCccCeeeccCcce-EEEEEcCCCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhc-CCCCcccEEEEEEeCCeeEEEEe
Q 044615 464 FDDGHCIGNGGQGS-VYKAKLPTGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKI-RHRNIVKFYGFCSHALHSFVVYE 541 (571)
Q Consensus 464 ~~~~~~lg~G~~g~-V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l-~H~niv~l~~~~~~~~~~~lv~e 541 (571)
|...+.+|.|+-|+ ||+|.+ .|+.||||++-... .....+||..+..- +|||||++++.-.+....||..|
T Consensus 511 ~~~~eilG~Gs~Gt~Vf~G~y-e~R~VAVKrll~e~------~~~A~rEi~lL~eSD~H~NviRyyc~E~d~qF~YIalE 583 (903)
T KOG1027|consen 511 FSPKEILGYGSNGTVVFRGVY-EGREVAVKRLLEEF------FDFAQREIQLLQESDEHPNVIRYYCSEQDRQFLYIALE 583 (903)
T ss_pred eccHHHcccCCCCcEEEEEee-CCceehHHHHhhHh------HHHHHHHHHHHHhccCCCceEEEEeeccCCceEEEEeh
Confidence 44456788998886 899998 58899999986432 34457999998887 79999999999888999999999
Q ss_pred ccCCCChhhhhccC
Q 044615 542 YLEMGSLAMNLSND 555 (571)
Q Consensus 542 ~~~~G~L~~~l~~~ 555 (571)
.|.. +|.+++...
T Consensus 584 LC~~-sL~dlie~~ 596 (903)
T KOG1027|consen 584 LCAC-SLQDLIESS 596 (903)
T ss_pred Hhhh-hHHHHHhcc
Confidence 9986 999999864
No 456
>PF12799 LRR_4: Leucine Rich repeats (2 copies); PDB: 2OMT_A 1XEU_A 2OMX_A 2OMU_A 2UZY_A 2WQU_D 1D0B_A 2WQW_A 1OTO_A 2WQV_B ....
Probab=97.96 E-value=9.4e-06 Score=54.10 Aligned_cols=36 Identities=44% Similarity=0.675 Sum_probs=18.3
Q ss_pred CCCEEecccCcCcccccccccCCCCCCEEEcccCcCc
Q 044615 98 SLSDLQLSENILNGSIPLALGNLTNLVVLDLSTNKLS 134 (571)
Q Consensus 98 ~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~ 134 (571)
+|++|++++|+|+ .+|..++++++|++|++++|+|+
T Consensus 2 ~L~~L~l~~N~i~-~l~~~l~~l~~L~~L~l~~N~i~ 37 (44)
T PF12799_consen 2 NLEELDLSNNQIT-DLPPELSNLPNLETLNLSNNPIS 37 (44)
T ss_dssp T-SEEEETSSS-S-SHGGHGTTCTTSSEEEETSSCCS
T ss_pred cceEEEccCCCCc-ccCchHhCCCCCCEEEecCCCCC
Confidence 4555555555555 33444555555555555555554
No 457
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=97.94 E-value=5.5e-06 Score=85.19 Aligned_cols=103 Identities=21% Similarity=0.262 Sum_probs=80.4
Q ss_pred ccCCCccCeeeccCcceEEEEE-cCCCCEEEEEEccCCCCCchHhHHHHHHHHHHHhh-cCCCCcccEEEEEEeCCeeEE
Q 044615 461 TNNFDDGHCIGNGGQGSVYKAK-LPTGEIVDVKKFHSPLPDEMACQQEFLNEVNALTK-IRHRNIVKFYGFCSHALHSFV 538 (571)
Q Consensus 461 ~~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~-l~H~niv~l~~~~~~~~~~~l 538 (571)
++.|+....+|.|+|+.|-.+. ..+++..|||++.+.... -.+|+.++.. -+||||+++++.+.++.+.|+
T Consensus 321 ~~~y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~~~~-------~~~e~~~~~~~~~h~niv~~~~v~~~~~~~~~ 393 (612)
T KOG0603|consen 321 TESYEFREELGEGSFSAVKYCESSPTDQEPAVKIISKRADD-------NQDEIPISLLVRDHPNIVKSHDVYEDGKEIYL 393 (612)
T ss_pred chhhccccccCCCCccceeeeeccccccchhheeccccccc-------cccccchhhhhcCCCcceeecceecCCceeee
Confidence 5678888889999999999998 568899999999865222 2366756544 489999999999999999999
Q ss_pred EEeccCCCChhhhhccCCCc--cCCCHHHHhhhc
Q 044615 539 VYEYLEMGSLAMNLSNDAAA--EQFCWTKRMNAI 570 (571)
Q Consensus 539 v~e~~~~G~L~~~l~~~~~~--~~l~w~~r~~ia 570 (571)
|||++.||.+.+.+...... ..-.|...+-+|
T Consensus 394 v~e~l~g~ell~ri~~~~~~~~e~~~w~~~lv~A 427 (612)
T KOG0603|consen 394 VMELLDGGELLRRIRSKPEFCSEASQWAAELVSA 427 (612)
T ss_pred eehhccccHHHHHHHhcchhHHHHHHHHHHHHHH
Confidence 99999999998888754332 223476666554
No 458
>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]
Probab=97.93 E-value=3.8e-06 Score=77.32 Aligned_cols=91 Identities=19% Similarity=0.276 Sum_probs=72.3
Q ss_pred cCCCccCeeeccCcceEEEEEcC-CCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhc-CCCCcccEEE-EEEeCCeeEE
Q 044615 462 NNFDDGHCIGNGGQGSVYKAKLP-TGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKI-RHRNIVKFYG-FCSHALHSFV 538 (571)
Q Consensus 462 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l-~H~niv~l~~-~~~~~~~~~l 538 (571)
+.|.+.+.+|+|.||.+..++++ +.+.+|+|.+.... ...++|.+|..---.+ .|.||+.-++ .|++.+.++.
T Consensus 24 d~y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p~----tt~~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt~d~YvF 99 (378)
T KOG1345|consen 24 DVYTINKQLGEGRFGKILLAEHRQSKTRIVLKAVPRPQ----TTQADFVREFHYSFFLSPHQHIIDTYEVAFQTSDAYVF 99 (378)
T ss_pred hhhhHHHHhcccceeeEEeeeccCCceEEEeeccCcch----hhHHHHHHHhccceeeccchhhhHHHHHHhhcCceEEE
Confidence 34888899999999999999954 67789999987653 2357899998654344 6889997775 5677788889
Q ss_pred EEeccCCCChhhhhccCC
Q 044615 539 VYEYLEMGSLAMNLSNDA 556 (571)
Q Consensus 539 v~e~~~~G~L~~~l~~~~ 556 (571)
++||+|.|||..-+...+
T Consensus 100 ~qE~aP~gdL~snv~~~G 117 (378)
T KOG1345|consen 100 VQEFAPRGDLRSNVEAAG 117 (378)
T ss_pred eeccCccchhhhhcCccc
Confidence 999999999998887543
No 459
>PHA02882 putative serine/threonine kinase; Provisional
Probab=97.93 E-value=6.7e-05 Score=74.08 Aligned_cols=91 Identities=20% Similarity=0.226 Sum_probs=59.2
Q ss_pred cCCCccCeeeccCcceEEEEEcC-C---CCEEEEEEccCCCCCchHh--------HHHHHHHHHHHhhcCCCCcccEEEE
Q 044615 462 NNFDDGHCIGNGGQGSVYKAKLP-T---GEIVDVKKFHSPLPDEMAC--------QQEFLNEVNALTKIRHRNIVKFYGF 529 (571)
Q Consensus 462 ~~~~~~~~lg~G~~g~V~~~~~~-~---~~~vavK~~~~~~~~~~~~--------~~~~~~Ei~~l~~l~H~niv~l~~~ 529 (571)
..|.+.+.||+|+||.||+|... + +..+|+|............ ......+...+..++|+|+++++++
T Consensus 12 ~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~ 91 (294)
T PHA02882 12 KEWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLGIPKYYGC 91 (294)
T ss_pred CceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCCCCcEEEe
Confidence 46999999999999999999853 3 4566777644322111000 1112334455667899999999997
Q ss_pred EEeCC----eeEEEEeccCCCChhhhhc
Q 044615 530 CSHAL----HSFVVYEYLEMGSLAMNLS 553 (571)
Q Consensus 530 ~~~~~----~~~lv~e~~~~G~L~~~l~ 553 (571)
+.... ..++++|++.. ++.+.+.
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 118 (294)
T PHA02882 92 GSFKRCRMYYRFILLEKLVE-NTKEIFK 118 (294)
T ss_pred eeEecCCceEEEEEEehhcc-CHHHHHH
Confidence 76543 34788887754 5655554
No 460
>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]
Probab=97.92 E-value=7.5e-06 Score=80.03 Aligned_cols=94 Identities=24% Similarity=0.333 Sum_probs=78.6
Q ss_pred HHHHHccCCCccCeeeccCcceEEEEE-cC---CCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhc-CCCCcccEEEEE
Q 044615 456 EIIRATNNFDDGHCIGNGGQGSVYKAK-LP---TGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKI-RHRNIVKFYGFC 530 (571)
Q Consensus 456 ~~~~~~~~~~~~~~lg~G~~g~V~~~~-~~---~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l-~H~niv~l~~~~ 530 (571)
.+......|...++||+|.|+.||++. .. ..+.||+|.+..... ..+...|+++|..+ -|.||+++.+++
T Consensus 30 ~~p~~~~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts~-----p~ri~~El~~L~~~gG~~ni~~~~~~~ 104 (418)
T KOG1167|consen 30 DIPFISNAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTSS-----PSRILNELEMLYRLGGSDNIIKLNGCF 104 (418)
T ss_pred hhhhhhhhhhhhccccccchhhhhhhhHhhhccccceEeeeecccccC-----chHHHHHHHHHHHhccchhhhcchhhh
Confidence 344556678999999999999999998 33 567899999975432 35688999999998 689999999999
Q ss_pred EeCCeeEEEEeccCCCChhhhhcc
Q 044615 531 SHALHSFVVYEYLEMGSLAMNLSN 554 (571)
Q Consensus 531 ~~~~~~~lv~e~~~~G~L~~~l~~ 554 (571)
..++...+|+||++.-+..++...
T Consensus 105 rnnd~v~ivlp~~~H~~f~~l~~~ 128 (418)
T KOG1167|consen 105 RNNDQVAIVLPYFEHDRFRDLYRS 128 (418)
T ss_pred ccCCeeEEEecccCccCHHHHHhc
Confidence 999999999999999888877764
No 461
>PRK12274 serine/threonine protein kinase; Provisional
Probab=97.92 E-value=5.1e-05 Score=69.24 Aligned_cols=83 Identities=7% Similarity=-0.074 Sum_probs=61.7
Q ss_pred CccCeeeccCcceEEEEEcCCCCEEEEEEccCCCCCch-HhHHHHHHHHHHHhhcCC-CCcccEEEEEEeCCeeEEEEec
Q 044615 465 DDGHCIGNGGQGSVYKAKLPTGEIVDVKKFHSPLPDEM-ACQQEFLNEVNALTKIRH-RNIVKFYGFCSHALHSFVVYEY 542 (571)
Q Consensus 465 ~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~-~~~~~~~~Ei~~l~~l~H-~niv~l~~~~~~~~~~~lv~e~ 542 (571)
.+...+++|+||+||.+.. .+..++.+.+........ .....|.+|+++|+++.| +++++++++ +..|++|||
T Consensus 5 ~~~~~l~~~~f~~v~~~~~-~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~----~~~~lvmey 79 (218)
T PRK12274 5 AVNEPLKSDTFGRILLVRG-GERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHW----DGRHLDRSY 79 (218)
T ss_pred ccceeecCCCcceEEEeec-CCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEE----cCEEEEEee
Confidence 4567899999999997665 677777777754332111 113358899999999954 889999886 346899999
Q ss_pred cCCCChhhhh
Q 044615 543 LEMGSLAMNL 552 (571)
Q Consensus 543 ~~~G~L~~~l 552 (571)
++|++|.+.+
T Consensus 80 I~G~~L~~~~ 89 (218)
T PRK12274 80 LAGAAMYQRP 89 (218)
T ss_pred ecCccHHhhh
Confidence 9999997654
No 462
>cd05119 RIO RIO kinase family, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct
Probab=97.91 E-value=2.8e-05 Score=71.09 Aligned_cols=78 Identities=22% Similarity=0.248 Sum_probs=51.5
Q ss_pred cCeeeccCcceEEEEEcCCCCEEEEEEccCCCCCchHhHH---------------------HHHHHHHHHhhcCCCC--c
Q 044615 467 GHCIGNGGQGSVYKAKLPTGEIVDVKKFHSPLPDEMACQQ---------------------EFLNEVNALTKIRHRN--I 523 (571)
Q Consensus 467 ~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~---------------------~~~~Ei~~l~~l~H~n--i 523 (571)
.+.||+|+||+||+|...+++.||||++............ ....|.+.+.++.+.. +
T Consensus 2 ~~~lg~G~~g~Vy~a~~~~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~ 81 (187)
T cd05119 2 GGPIGTGKEADVYLALDGDGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAGVPV 81 (187)
T ss_pred CcccccccceeEEEEECCCCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcCCCC
Confidence 4679999999999999778999999998754322111111 1135666666665443 4
Q ss_pred ccEEEEEEeCCeeEEEEeccCCCCh
Q 044615 524 VKFYGFCSHALHSFVVYEYLEMGSL 548 (571)
Q Consensus 524 v~l~~~~~~~~~~~lv~e~~~~G~L 548 (571)
.+.+++ ...++||||+++|++
T Consensus 82 ~~~~~~----~~~~lv~e~~~g~~~ 102 (187)
T cd05119 82 PKPIDL----NRHVLVMEFIGGDGI 102 (187)
T ss_pred CceEec----CCCEEEEEEeCCCCc
Confidence 444433 245899999999543
No 463
>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=97.83 E-value=3.3e-05 Score=70.06 Aligned_cols=87 Identities=20% Similarity=0.235 Sum_probs=69.1
Q ss_pred ccCCCccCeeeccCcceEEEEE-cCCCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhcCC-CCcccEEEEEEeCCeeEE
Q 044615 461 TNNFDDGHCIGNGGQGSVYKAK-LPTGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKIRH-RNIVKFYGFCSHALHSFV 538 (571)
Q Consensus 461 ~~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~H-~niv~l~~~~~~~~~~~l 538 (571)
.++|...++||+|+||.+|.|. ..+|+.||||.=..... ..+...|.++-.-++| ..|..+.-+..+...-.+
T Consensus 14 ~gky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~a~-----hpqL~yEskvY~iL~~g~GiP~i~~y~~e~~ynvl 88 (341)
T KOG1163|consen 14 GGKYKLVRKIGSGSFGDIYLGISITSGEEVAIKLESSKAK-----HPQLLYESKVYRILQGGVGIPHIRHYGTEKDYNVL 88 (341)
T ss_pred ccceEEEEeecCCchhheeeeeeccCCceEEEEeecccCC-----CcchhHHHHHHHHhccCCCCchhhhhcccccccee
Confidence 3579999999999999999999 77899999998543321 2356788888888876 577777777778888889
Q ss_pred EEeccCCCChhhhhc
Q 044615 539 VYEYLEMGSLAMNLS 553 (571)
Q Consensus 539 v~e~~~~G~L~~~l~ 553 (571)
|||.. |-+|+++..
T Consensus 89 VMdLL-GPsLEdLfn 102 (341)
T KOG1163|consen 89 VMDLL-GPSLEDLFN 102 (341)
T ss_pred eeecc-CccHHHHHH
Confidence 99976 568887764
No 464
>PF12799 LRR_4: Leucine Rich repeats (2 copies); PDB: 2OMT_A 1XEU_A 2OMX_A 2OMU_A 2UZY_A 2WQU_D 1D0B_A 2WQW_A 1OTO_A 2WQV_B ....
Probab=97.82 E-value=1.9e-05 Score=52.57 Aligned_cols=36 Identities=39% Similarity=0.611 Sum_probs=20.2
Q ss_pred CCCEEEcccCcCcccccccccCCCCCCeeecccCcCc
Q 044615 122 NLVVLDLSTNKLSGSIPLSFANLTSLSILYLYENSLC 158 (571)
Q Consensus 122 ~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~ 158 (571)
+|++|++++|+|+ .+|..+++|++|++|++++|.++
T Consensus 2 ~L~~L~l~~N~i~-~l~~~l~~l~~L~~L~l~~N~i~ 37 (44)
T PF12799_consen 2 NLEELDLSNNQIT-DLPPELSNLPNLETLNLSNNPIS 37 (44)
T ss_dssp T-SEEEETSSS-S-SHGGHGTTCTTSSEEEETSSCCS
T ss_pred cceEEEccCCCCc-ccCchHhCCCCCCEEEecCCCCC
Confidence 5666666666665 33444566666666666666654
No 465
>KOG1644 consensus U2-associated snRNP A' protein [RNA processing and modification]
Probab=97.82 E-value=4.3e-05 Score=67.62 Aligned_cols=102 Identities=27% Similarity=0.318 Sum_probs=65.5
Q ss_pred CCCEEEcccCccccccchhhccCCCCCEEEcCCccCccCcchhhhcccCCCEEEccCCcCCccc-chhccCCCCCCEEEc
Q 044615 243 QLEYLDLSANTFHKSIPESLSNLVKLHYLNLSNNQFSQKIPNKIEKLIHLSELDLSHNIFREEI-PSQICSMQSLEKLNL 321 (571)
Q Consensus 243 ~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~-~~~~~~l~~L~~L~L 321 (571)
+...+||++|.+... ..|..++.|.+|.+.+|+|+.+-|..-.-+++|+.|.|.+|.+.... -.-+..+|.|++|.+
T Consensus 43 ~~d~iDLtdNdl~~l--~~lp~l~rL~tLll~nNrIt~I~p~L~~~~p~l~~L~LtnNsi~~l~dl~pLa~~p~L~~Ltl 120 (233)
T KOG1644|consen 43 QFDAIDLTDNDLRKL--DNLPHLPRLHTLLLNNNRITRIDPDLDTFLPNLKTLILTNNSIQELGDLDPLASCPKLEYLTL 120 (233)
T ss_pred ccceecccccchhhc--ccCCCccccceEEecCCcceeeccchhhhccccceEEecCcchhhhhhcchhccCCccceeee
Confidence 455667777766422 44566777777777777777666655556677777888777765421 123566778888888
Q ss_pred cCCcCcccc---ccccccCCCCCEEECc
Q 044615 322 SHNNLSGSI---PRCFEEMHWLSCIDIS 346 (571)
Q Consensus 322 s~n~l~~~~---p~~~~~l~~L~~L~ls 346 (571)
-+|+.+..- --.+..+++|+.||.+
T Consensus 121 l~Npv~~k~~YR~yvl~klp~l~~LDF~ 148 (233)
T KOG1644|consen 121 LGNPVEHKKNYRLYVLYKLPSLRTLDFQ 148 (233)
T ss_pred cCCchhcccCceeEEEEecCcceEeehh
Confidence 888775321 1134567777777765
No 466
>KOG1644 consensus U2-associated snRNP A' protein [RNA processing and modification]
Probab=97.77 E-value=4.5e-05 Score=67.46 Aligned_cols=82 Identities=26% Similarity=0.226 Sum_probs=38.7
Q ss_pred CcEEEccCCcccccCCccccCCCCCcEEeCccCcCcCCCChhhhCCCCCCEEEcccCcccccc-chhhccCCCCCEEEcC
Q 044615 196 LKVLYLSSNHIVGEIPLGHGMLSSLIQLTLNNNELSGQLSPELGSLIQLEYLDLSANTFHKSI-PESLSNLVKLHYLNLS 274 (571)
Q Consensus 196 L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~-~~~l~~l~~L~~L~Ls 274 (571)
...+||++|.+.. ...|..++.|.+|.+.+|+|+.+.|.--..+++|..|.|.+|++.... -.-+..+|+|++|.+-
T Consensus 44 ~d~iDLtdNdl~~--l~~lp~l~rL~tLll~nNrIt~I~p~L~~~~p~l~~L~LtnNsi~~l~dl~pLa~~p~L~~Ltll 121 (233)
T KOG1644|consen 44 FDAIDLTDNDLRK--LDNLPHLPRLHTLLLNNNRITRIDPDLDTFLPNLKTLILTNNSIQELGDLDPLASCPKLEYLTLL 121 (233)
T ss_pred cceecccccchhh--cccCCCccccceEEecCCcceeeccchhhhccccceEEecCcchhhhhhcchhccCCccceeeec
Confidence 4555555555531 123344455555555555555444433334455555555555543210 1123444455555555
Q ss_pred CccCc
Q 044615 275 NNQFS 279 (571)
Q Consensus 275 ~n~l~ 279 (571)
+|.++
T Consensus 122 ~Npv~ 126 (233)
T KOG1644|consen 122 GNPVE 126 (233)
T ss_pred CCchh
Confidence 55443
No 467
>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase. This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.
Probab=97.76 E-value=4.5e-05 Score=79.13 Aligned_cols=86 Identities=14% Similarity=0.155 Sum_probs=57.6
Q ss_pred CeeeccCcceEEEEEcCCCCEEEEEEccCCCCCchH-------------------------------------hHHHHHH
Q 044615 468 HCIGNGGQGSVYKAKLPTGEIVDVKKFHSPLPDEMA-------------------------------------CQQEFLN 510 (571)
Q Consensus 468 ~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~-------------------------------------~~~~~~~ 510 (571)
+.+|+|++|+||+|++++|+.||||+..+....... ..-+|.+
T Consensus 123 ~plasaSigQVh~A~l~~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eldf~~ 202 (437)
T TIGR01982 123 KPLAAASIAQVHRARLVDGKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRRELDLRR 202 (437)
T ss_pred cceeeeehhheEEEEecCCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHHHHCHHH
Confidence 679999999999999889999999998764311100 0012556
Q ss_pred HHHHHhhc----CCCCcccEEEEEE-eCCeeEEEEeccCCCChhhhhc
Q 044615 511 EVNALTKI----RHRNIVKFYGFCS-HALHSFVVYEYLEMGSLAMNLS 553 (571)
Q Consensus 511 Ei~~l~~l----~H~niv~l~~~~~-~~~~~~lv~e~~~~G~L~~~l~ 553 (571)
|++.+.++ +|.+-|.+-..|. .....++||||++|++|.+...
T Consensus 203 Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~~~~~ 250 (437)
T TIGR01982 203 EAANASELGENFKNDPGVYVPEVYWDRTSERVLTMEWIDGIPLSDIAA 250 (437)
T ss_pred HHHHHHHHHHhcCCCCCEEeCCEehhhcCCceEEEEeECCcccccHHH
Confidence 66655554 2333333333332 2345789999999999988765
No 468
>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]
Probab=97.75 E-value=2e-05 Score=76.22 Aligned_cols=90 Identities=24% Similarity=0.241 Sum_probs=73.6
Q ss_pred ccCCCccCeeeccCcceEEEEE-cCCCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhcCCC------CcccEEEEEEeC
Q 044615 461 TNNFDDGHCIGNGGQGSVYKAK-LPTGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKIRHR------NIVKFYGFCSHA 533 (571)
Q Consensus 461 ~~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~H~------niv~l~~~~~~~ 533 (571)
+..|.+...+|+|.||+|..+. .+++..||||+++... +..+.-+-|++++.++.+. -+|++.++|...
T Consensus 88 ~~Ry~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V~----kYreAa~iEi~vLqki~~~DP~g~~rcv~m~~wFdyr 163 (415)
T KOG0671|consen 88 TNRYEIVDLLGEGTFGKVVECWDRETKEHVALKIIKNVD----KYREAALIEIEVLQKINESDPNGKFRCVQMRDWFDYR 163 (415)
T ss_pred ccceehhhhhcCCcccceEEEeecCCCceehHHHHHHHH----HHhhHHHHHHHHHHHHHhcCCCCceEEEeeehhhhcc
Confidence 5679999999999999999998 5578999999987432 3345667899999998432 478888999999
Q ss_pred CeeEEEEeccCCCChhhhhccC
Q 044615 534 LHSFVVYEYLEMGSLAMNLSND 555 (571)
Q Consensus 534 ~~~~lv~e~~~~G~L~~~l~~~ 555 (571)
+..+||+|.+ |-++++++.+.
T Consensus 164 ghiCivfell-G~S~~dFlk~N 184 (415)
T KOG0671|consen 164 GHICIVFELL-GLSTFDFLKEN 184 (415)
T ss_pred CceEEEEecc-ChhHHHHhccC
Confidence 9999999977 45999999864
No 469
>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]
Probab=97.73 E-value=2.4e-05 Score=69.39 Aligned_cols=88 Identities=20% Similarity=0.341 Sum_probs=70.0
Q ss_pred CCCccCeeeccCcceEEEEE-cCCCCEEEEEEccCCCCCchHhHHHHHHHHHH-HhhcCCCCcccEEEEEEeCCeeEEEE
Q 044615 463 NFDDGHCIGNGGQGSVYKAK-LPTGEIVDVKKFHSPLPDEMACQQEFLNEVNA-LTKIRHRNIVKFYGFCSHALHSFVVY 540 (571)
Q Consensus 463 ~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~-l~~l~H~niv~l~~~~~~~~~~~lv~ 540 (571)
+...+..||+|+||.|-+-+ ..+|...|+|.+..... .+..++..+|+.+ ++....|.+|+++|.+......+|.|
T Consensus 47 ~L~~i~elGrGayG~vekmrh~~sg~imAvKri~~tvn--~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~regdvwIcM 124 (282)
T KOG0984|consen 47 DLVGIEELGRGAYGVVEKMRHIQSGTIMAVKRIRATVN--SQEQKRLLMDLDIIMRTVDCPFTVHFYGALFREGDVWICM 124 (282)
T ss_pred hhhhhhhhcCCccchhhheeeccCCeEEEEeeehhhcC--hHHHHHHHHhhhhhccCCCCCeEEEeehhhhccccEEEeH
Confidence 34456779999999998888 45899999999975432 3456778889977 55568999999999999999999999
Q ss_pred eccCCCChhhhhc
Q 044615 541 EYLEMGSLAMNLS 553 (571)
Q Consensus 541 e~~~~G~L~~~l~ 553 (571)
|.|.. +|..+-+
T Consensus 125 E~M~t-Sldkfy~ 136 (282)
T KOG0984|consen 125 ELMDT-SLDKFYR 136 (282)
T ss_pred HHhhh-hHHHHHH
Confidence 99975 6755543
No 470
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=97.72 E-value=4e-06 Score=77.05 Aligned_cols=88 Identities=19% Similarity=0.334 Sum_probs=70.9
Q ss_pred cCeeeccCcceEEEEEcCCCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhcCCCCcccEEEEEEeCCeeEEEEeccCCC
Q 044615 467 GHCIGNGGQGSVYKAKLPTGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKIRHRNIVKFYGFCSHALHSFVVYEYLEMG 546 (571)
Q Consensus 467 ~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~G 546 (571)
.-++.+.-.|+.|+|++. |..+++|++...... ....++|..|.-.++-+.||||.+++|.|.++..+.++..||+.|
T Consensus 195 ~tkl~e~hsgelwrgrwq-gndivakil~vr~~t-~risrdfneefp~lrifshpnilpvlgacnsppnlv~isq~mp~g 272 (448)
T KOG0195|consen 195 ITKLAESHSGELWRGRWQ-GNDIVAKILNVREVT-ARISRDFNEEFPALRIFSHPNILPVLGACNSPPNLVIISQYMPFG 272 (448)
T ss_pred hhhhccCCCccccccccc-Ccchhhhhhhhhhcc-hhhcchhhhhCcceeeecCCchhhhhhhccCCCCceEeeeeccch
Confidence 345777888999999984 556667877643222 122467888988899999999999999999999999999999999
Q ss_pred ChhhhhccCC
Q 044615 547 SLAMNLSNDA 556 (571)
Q Consensus 547 ~L~~~l~~~~ 556 (571)
+|+..+++..
T Consensus 273 slynvlhe~t 282 (448)
T KOG0195|consen 273 SLYNVLHEQT 282 (448)
T ss_pred HHHHHHhcCc
Confidence 9999999653
No 471
>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed
Probab=97.72 E-value=1.5e-05 Score=83.70 Aligned_cols=89 Identities=13% Similarity=0.157 Sum_probs=59.8
Q ss_pred cCCCccCeeeccCcceEEEEEcCC-CCEEEEEEccCCCCCc---------------------------h----HhHH---
Q 044615 462 NNFDDGHCIGNGGQGSVYKAKLPT-GEIVDVKKFHSPLPDE---------------------------M----ACQQ--- 506 (571)
Q Consensus 462 ~~~~~~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~~~~---------------------------~----~~~~--- 506 (571)
.+|+. +.+|+|++|+||+|+.++ |+.||||++.+..... . ...+
T Consensus 120 ~~fd~-~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~~l~ 198 (537)
T PRK04750 120 DDFDI-KPLASASIAQVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFEKTLH 198 (537)
T ss_pred HhcCh-hhhcCCCccEEEEEEECCCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHHHH
Confidence 45776 789999999999999766 9999999998653110 0 0011
Q ss_pred ---HHHHHHHHHhhc----CCCCcccEEEEEEe-CCeeEEEEeccCCCChhhh
Q 044615 507 ---EFLNEVNALTKI----RHRNIVKFYGFCSH-ALHSFVVYEYLEMGSLAMN 551 (571)
Q Consensus 507 ---~~~~Ei~~l~~l----~H~niv~l~~~~~~-~~~~~lv~e~~~~G~L~~~ 551 (571)
+|.+|+.-+.++ .+.+.|.+-.++.+ ....++||||++|+.+.+.
T Consensus 199 ~ElD~~~Ea~N~~~~~~~f~~~~~v~VP~v~~d~st~~VLvmE~i~G~~l~d~ 251 (537)
T PRK04750 199 DELDLMREAANASQLRRNFEDSDMLYVPEVYWDYCSETVMVMERMYGIPVSDV 251 (537)
T ss_pred HhhCHHHHHHHHHHHHHHccCCCCeecceeecccCCCceEEEeeecCccHHhH
Confidence 245555544444 35555554455543 4567899999999999764
No 472
>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]
Probab=97.71 E-value=0.00018 Score=71.74 Aligned_cols=90 Identities=30% Similarity=0.456 Sum_probs=76.0
Q ss_pred CCccCeeeccCcceEEEEEcCCCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhcCCC-CcccEEEEEEeCCeeEEEEec
Q 044615 464 FDDGHCIGNGGQGSVYKAKLPTGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKIRHR-NIVKFYGFCSHALHSFVVYEY 542 (571)
Q Consensus 464 ~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~H~-niv~l~~~~~~~~~~~lv~e~ 542 (571)
|.....+|.|+||.||++... ..+|+|.+.............|.+|+.+++.+.|+ +++++.+++......++++||
T Consensus 2 ~~~~~~l~~g~~~~v~~~~~~--~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 79 (384)
T COG0515 2 YRILRKLGEGSFGEVYLARDR--KLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFFQDEGSLYLVMEY 79 (384)
T ss_pred ceeEEeecCCCCeEEEEEEec--cEEEEEeechhhccchhHHHHHHHHHHHHHHccCCcceeeEEEEEecCCEEEEEEec
Confidence 566788999999999999865 78899999866544433467899999999999998 799999999777778999999
Q ss_pred cCCCChhhhhccC
Q 044615 543 LEMGSLAMNLSND 555 (571)
Q Consensus 543 ~~~G~L~~~l~~~ 555 (571)
+.++++.+++...
T Consensus 80 ~~~~~l~~~~~~~ 92 (384)
T COG0515 80 VDGGSLEDLLKKI 92 (384)
T ss_pred CCCCcHHHHHHhc
Confidence 9999999777643
No 473
>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=97.68 E-value=2.7e-06 Score=78.19 Aligned_cols=89 Identities=21% Similarity=0.359 Sum_probs=70.3
Q ss_pred CCccCeeeccCcceEEEEE-cCCCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhcCCCCcccEEEEEEeC-----CeeE
Q 044615 464 FDDGHCIGNGGQGSVYKAK-LPTGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKIRHRNIVKFYGFCSHA-----LHSF 537 (571)
Q Consensus 464 ~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~-----~~~~ 537 (571)
.+..+.||-|+||.||.+. -++|+.||.|++... .......+++.+|++++.-++|.|+...++....+ .++|
T Consensus 55 i~PDRPIGYGAFGVVWsVTDPRdgrrvalkK~pnv-fq~L~s~krvFre~kmLcfFkHdNVLSaLDILQPph~dfFqEiY 133 (449)
T KOG0664|consen 55 IQPDRPIGYGAFGVVWSVTDPRSGKRVALKKMPNV-FQNLASCKRVFREIKMLSSFRHDNVLSLLDILQPANPSFFQELY 133 (449)
T ss_pred CCCCCcccccceeEEEeccCCCCccchhHhhcchH-HHHHHHHHHHHHHHHHHHhhccccHHHHHHhcCCCCchHHHHHH
Confidence 4566889999999999998 568999999988532 23334457788999999999999999999887654 3578
Q ss_pred EEEeccCCCChhhhhcc
Q 044615 538 VVYEYLEMGSLAMNLSN 554 (571)
Q Consensus 538 lv~e~~~~G~L~~~l~~ 554 (571)
.+.|.|.. ||.+.|-.
T Consensus 134 V~TELmQS-DLHKIIVS 149 (449)
T KOG0664|consen 134 VLTELMQS-DLHKIIVS 149 (449)
T ss_pred HHHHHHHh-hhhheecc
Confidence 88898864 88877653
No 474
>PRK15386 type III secretion protein GogB; Provisional
Probab=97.67 E-value=0.0001 Score=73.81 Aligned_cols=75 Identities=19% Similarity=0.292 Sum_probs=42.5
Q ss_pred ccCCCCCCeeecccCcCcccCCccccCCCCCCEEEccCCCCCccCChhhhhccCCCcEEEccCC-cccccCCccccCCCC
Q 044615 141 FANLTSLSILYLYENSLCDSIPKEIGNMNSLSILDLSSNKLNGSIPLSLANLTNSLKVLYLSSN-HIVGEIPLGHGMLSS 219 (571)
Q Consensus 141 ~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~~L~~L~l~~n-~~~~~~~~~~~~l~~ 219 (571)
+..+.+++.|++++|.+. .+|. -..+|+.|.+++|.-...+|..+ +.+|+.|++++| .+. .+| .+
T Consensus 48 ~~~~~~l~~L~Is~c~L~-sLP~---LP~sLtsL~Lsnc~nLtsLP~~L---P~nLe~L~Ls~Cs~L~-sLP------~s 113 (426)
T PRK15386 48 IEEARASGRLYIKDCDIE-SLPV---LPNELTEITIENCNNLTTLPGSI---PEGLEKLTVCHCPEIS-GLP------ES 113 (426)
T ss_pred HHHhcCCCEEEeCCCCCc-ccCC---CCCCCcEEEccCCCCcccCCchh---hhhhhheEccCccccc-ccc------cc
Confidence 344577888888877665 3452 12357788877654333555433 334777777776 332 233 24
Q ss_pred CcEEeCccCc
Q 044615 220 LIQLTLNNNE 229 (571)
Q Consensus 220 L~~L~l~~n~ 229 (571)
|+.|++..+.
T Consensus 114 Le~L~L~~n~ 123 (426)
T PRK15386 114 VRSLEIKGSA 123 (426)
T ss_pred cceEEeCCCC
Confidence 5556655444
No 475
>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]
Probab=97.67 E-value=2.6e-05 Score=71.99 Aligned_cols=87 Identities=21% Similarity=0.354 Sum_probs=67.5
Q ss_pred CCccCeeeccCcceEEEEE-cCCCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhc-CCCCcccEEEEEEeCCeeEEEEe
Q 044615 464 FDDGHCIGNGGQGSVYKAK-LPTGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKI-RHRNIVKFYGFCSHALHSFVVYE 541 (571)
Q Consensus 464 ~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l-~H~niv~l~~~~~~~~~~~lv~e 541 (571)
.+....+|+|..|+|++++ .++|...|||.+.... .....+++...+.++... +.|.||+.+|||..+...++.||
T Consensus 94 l~~l~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~--Nkee~kRILmDldvv~~s~dcpyIV~c~GyFi~n~dV~IcMe 171 (391)
T KOG0983|consen 94 LENLGDLGSGTCGQVWKMRFRSTGHIIAVKQMRRTG--NKEENKRILMDLDVVLKSHDCPYIVQCFGYFITNTDVFICME 171 (391)
T ss_pred hhhHHhhcCCCccceEEEEEcccceEEEEEeecccC--CHHHHHHHHHhhhHHhhccCCCeeeeeeeEEeeCchHHHHHH
Confidence 3445679999999999999 5579999999997653 334456777888776655 58999999999999999999999
Q ss_pred ccCCCChhhhhc
Q 044615 542 YLEMGSLAMNLS 553 (571)
Q Consensus 542 ~~~~G~L~~~l~ 553 (571)
.|.. .+.++++
T Consensus 172 lMs~-C~ekLlk 182 (391)
T KOG0983|consen 172 LMST-CAEKLLK 182 (391)
T ss_pred HHHH-HHHHHHH
Confidence 8853 3444444
No 476
>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=97.66 E-value=0.00012 Score=73.18 Aligned_cols=103 Identities=20% Similarity=0.239 Sum_probs=75.3
Q ss_pred CCCccCeeeccCcceEEEEEcC-C-CCEEEEEEccCCCCCchHhHHHHHHHHHHHhhcCC----CCcccEEEEE-EeCCe
Q 044615 463 NFDDGHCIGNGGQGSVYKAKLP-T-GEIVDVKKFHSPLPDEMACQQEFLNEVNALTKIRH----RNIVKFYGFC-SHALH 535 (571)
Q Consensus 463 ~~~~~~~lg~G~~g~V~~~~~~-~-~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~H----~niv~l~~~~-~~~~~ 535 (571)
.|.+.+.||+|+||.||.|... + ...+|+|.-....... ...+..|+.++..+.+ +++.++++.. .....
T Consensus 19 ~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~---~~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~~~~~~ 95 (322)
T KOG1164|consen 19 RYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSK---PSVLKIEIQVLKKLEKKNGPSHFPKLLDHGRSTEDF 95 (322)
T ss_pred ceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCC---CccchhHHHHHHHHhhhcCCCCCCEEEEeccCCCce
Confidence 6999999999999999999943 3 3578888876432221 1257788888888863 5888999888 47778
Q ss_pred eEEEEeccCCCChhhhhccCCCccCCCHHHHhhhc
Q 044615 536 SFVVYEYLEMGSLAMNLSNDAAAEQFCWTKRMNAI 570 (571)
Q Consensus 536 ~~lv~e~~~~G~L~~~l~~~~~~~~l~w~~r~~ia 570 (571)
.|+||+.+ |-+|.++..... ...++-...++||
T Consensus 96 ~~iVM~l~-G~sL~dl~~~~~-~~~fs~~T~l~ia 128 (322)
T KOG1164|consen 96 NFIVMSLL-GPSLEDLRKRNP-PGRFSRKTVLRIA 128 (322)
T ss_pred eEEEEecc-CccHHHHHHhCC-CCCcCHhHHHHHH
Confidence 89999966 679999775443 3456666655554
No 477
>KOG3665 consensus ZYG-1-like serine/threonine protein kinases [General function prediction only]
Probab=97.64 E-value=1.5e-05 Score=86.42 Aligned_cols=85 Identities=22% Similarity=0.298 Sum_probs=40.0
Q ss_pred CCCCCCEEecccCcCcc-cccccccCCCCCCEEEcccCcCcccccccccCCCCCCeeecccCcCcc-cCCccccCCCCCC
Q 044615 95 NMKSLSDLQLSENILNG-SIPLALGNLTNLVVLDLSTNKLSGSIPLSFANLTSLSILYLYENSLCD-SIPKEIGNMNSLS 172 (571)
Q Consensus 95 ~l~~L~~L~L~~n~i~~-~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~-~~~~~l~~l~~L~ 172 (571)
-+|+|+.|.+++-.+.. ..-....++++|..||+++++++.. ..+++|++|+.|.+.+=.+.. ..-..+..|++|+
T Consensus 146 ~LPsL~sL~i~~~~~~~~dF~~lc~sFpNL~sLDIS~TnI~nl--~GIS~LknLq~L~mrnLe~e~~~~l~~LF~L~~L~ 223 (699)
T KOG3665|consen 146 MLPSLRSLVISGRQFDNDDFSQLCASFPNLRSLDISGTNISNL--SGISRLKNLQVLSMRNLEFESYQDLIDLFNLKKLR 223 (699)
T ss_pred hCcccceEEecCceecchhHHHHhhccCccceeecCCCCccCc--HHHhccccHHHHhccCCCCCchhhHHHHhcccCCC
Confidence 34555555555543321 1122334455555555555555433 345555555555554433321 1112344555666
Q ss_pred EEEccCCCC
Q 044615 173 ILDLSSNKL 181 (571)
Q Consensus 173 ~L~L~~n~l 181 (571)
.||+|....
T Consensus 224 vLDIS~~~~ 232 (699)
T KOG3665|consen 224 VLDISRDKN 232 (699)
T ss_pred eeecccccc
Confidence 666555443
No 478
>KOG3665 consensus ZYG-1-like serine/threonine protein kinases [General function prediction only]
Probab=97.59 E-value=4.9e-05 Score=82.59 Aligned_cols=136 Identities=22% Similarity=0.273 Sum_probs=74.1
Q ss_pred CCcEEEccCCcccc-cCCccc-cCCCCCcEEeCccCcCcCC-CChhhhCCCCCCEEEcccCccccccchhhccCCCCCEE
Q 044615 195 SLKVLYLSSNHIVG-EIPLGH-GMLSSLIQLTLNNNELSGQ-LSPELGSLIQLEYLDLSANTFHKSIPESLSNLVKLHYL 271 (571)
Q Consensus 195 ~L~~L~l~~n~~~~-~~~~~~-~~l~~L~~L~l~~n~l~~~-~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L 271 (571)
+|+.|++++...-. ..|..+ ..+|+|+.|.+.+-.+... +.....++|+|..||+|+.+++.. ..++.+++|+.|
T Consensus 123 nL~~LdI~G~~~~s~~W~~kig~~LPsL~sL~i~~~~~~~~dF~~lc~sFpNL~sLDIS~TnI~nl--~GIS~LknLq~L 200 (699)
T KOG3665|consen 123 NLQHLDISGSELFSNGWPKKIGTMLPSLRSLVISGRQFDNDDFSQLCASFPNLRSLDISGTNISNL--SGISRLKNLQVL 200 (699)
T ss_pred hhhhcCccccchhhccHHHHHhhhCcccceEEecCceecchhHHHHhhccCccceeecCCCCccCc--HHHhccccHHHH
Confidence 48888887754321 111122 2467777777777555432 223345677777777777766533 556667777777
Q ss_pred EcCCccCcc-CcchhhhcccCCCEEEccCCcCCccc--c----hhccCCCCCCEEEccCCcCcccccc
Q 044615 272 NLSNNQFSQ-KIPNKIEKLIHLSELDLSHNIFREEI--P----SQICSMQSLEKLNLSHNNLSGSIPR 332 (571)
Q Consensus 272 ~Ls~n~l~~-~~~~~~~~l~~L~~L~Ls~n~l~~~~--~----~~~~~l~~L~~L~Ls~n~l~~~~p~ 332 (571)
.+.+=.+.. ..-..+-.|++|+.||+|..+..... . +.-..+|.|+.||.|++.+....-+
T Consensus 201 ~mrnLe~e~~~~l~~LF~L~~L~vLDIS~~~~~~~~~ii~qYlec~~~LpeLrfLDcSgTdi~~~~le 268 (699)
T KOG3665|consen 201 SMRNLEFESYQDLIDLFNLKKLRVLDISRDKNNDDTKIIEQYLECGMVLPELRFLDCSGTDINEEILE 268 (699)
T ss_pred hccCCCCCchhhHHHHhcccCCCeeeccccccccchHHHHHHHHhcccCccccEEecCCcchhHHHHH
Confidence 666655432 11123445667777777665433211 1 1123356666666666666544433
No 479
>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]
Probab=97.46 E-value=0.00033 Score=68.09 Aligned_cols=91 Identities=20% Similarity=0.215 Sum_probs=70.3
Q ss_pred ccCCCccCeeeccCcceEEEEEcCC------CCEEEEEEccCCCCCchHhHHHHHHHHHHHhhcCCCCcccEEEEEEe-C
Q 044615 461 TNNFDDGHCIGNGGQGSVYKAKLPT------GEIVDVKKFHSPLPDEMACQQEFLNEVNALTKIRHRNIVKFYGFCSH-A 533 (571)
Q Consensus 461 ~~~~~~~~~lg~G~~g~V~~~~~~~------~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~-~ 533 (571)
...++....+-+|.||.||+|.+.. .+.|-||.++.. .+......+.+|.-.+..+.|||+.++.+++.+ .
T Consensus 283 r~Rv~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~--AS~iQv~~~L~es~lly~~sH~nll~V~~V~ie~~ 360 (563)
T KOG1024|consen 283 RCRVRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQH--ASQIQVNLLLQESMLLYGASHPNLLSVLGVSIEDY 360 (563)
T ss_pred hhheechhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhc--ccHHHHHHHHHHHHHHhcCcCCCccceeEEEeecc
Confidence 3446667788999999999996432 234556666432 223345678999999999999999999999865 4
Q ss_pred CeeEEEEeccCCCChhhhhc
Q 044615 534 LHSFVVYEYLEMGSLAMNLS 553 (571)
Q Consensus 534 ~~~~lv~e~~~~G~L~~~l~ 553 (571)
...+.+|.++.-|+|..+|.
T Consensus 361 ~~P~V~y~~~~~gNLK~FL~ 380 (563)
T KOG1024|consen 361 ATPFVLYPATGVGNLKSFLQ 380 (563)
T ss_pred CcceEEEeccCcchHHHHHH
Confidence 66789999999999999998
No 480
>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=97.41 E-value=0.00029 Score=67.19 Aligned_cols=85 Identities=21% Similarity=0.257 Sum_probs=65.4
Q ss_pred CCCccCeeeccCcceEEEEE-cCCCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhc-CCCCcccEEEEEEeCCeeEEEE
Q 044615 463 NFDDGHCIGNGGQGSVYKAK-LPTGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKI-RHRNIVKFYGFCSHALHSFVVY 540 (571)
Q Consensus 463 ~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l-~H~niv~l~~~~~~~~~~~lv~ 540 (571)
.|.++++||+|+||+.+.|+ +-+++.||||.=...... .+...|.+.-+.+ ..+.|...+.+-..+-+-.+||
T Consensus 29 hyrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfEPrkS~A-----PQLrdEYr~YKlL~g~~GIP~vYYFGqeG~~NiLVi 103 (449)
T KOG1165|consen 29 HYRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFEPRKSEA-----PQLRDEYRTYKLLGGTEGIPQVYYFGQEGKYNILVI 103 (449)
T ss_pred cceeccccccCcceeeecccccccCceEEEEeccccCCc-----chHHHHHHHHHHHcCCCCCCceeeeccccchhhhhh
Confidence 58999999999999999999 668999999985433222 3455666665555 4589998888877777778999
Q ss_pred eccCCCChhhhhc
Q 044615 541 EYLEMGSLAMNLS 553 (571)
Q Consensus 541 e~~~~G~L~~~l~ 553 (571)
|.+ |-+|+|+..
T Consensus 104 dLL-GPSLEDLFD 115 (449)
T KOG1165|consen 104 DLL-GPSLEDLFD 115 (449)
T ss_pred hhh-CcCHHHHHH
Confidence 976 568887765
No 481
>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed
Probab=97.38 E-value=0.00078 Score=64.02 Aligned_cols=87 Identities=13% Similarity=0.119 Sum_probs=62.5
Q ss_pred cCeee-ccCcceEEEEEcCCCCEEEEEEccCCCC----------CchHhHHHHHHHHHHHhhcCCCCc--ccEEEEEEeC
Q 044615 467 GHCIG-NGGQGSVYKAKLPTGEIVDVKKFHSPLP----------DEMACQQEFLNEVNALTKIRHRNI--VKFYGFCSHA 533 (571)
Q Consensus 467 ~~~lg-~G~~g~V~~~~~~~~~~vavK~~~~~~~----------~~~~~~~~~~~Ei~~l~~l~H~ni--v~l~~~~~~~ 533 (571)
...+| .||.|+||.+... +..+|||.+..... ........+.+|++++.+++|+++ ++.+++....
T Consensus 36 ~~~lg~~~g~gtv~~v~~~-~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP~pl~~~~~~ 114 (239)
T PRK01723 36 ARVVGSAKGRGTTWFVQTP-GVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVPRPIAARVVR 114 (239)
T ss_pred CceeecCCCCccEEEEEeC-CceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCceeEeeeeee
Confidence 35688 8999999998874 77889998853211 011234568899999999999885 6777765432
Q ss_pred -C---eeEEEEeccCC-CChhhhhcc
Q 044615 534 -L---HSFVVYEYLEM-GSLAMNLSN 554 (571)
Q Consensus 534 -~---~~~lv~e~~~~-G~L~~~l~~ 554 (571)
. ..++||||++| ++|.+++.+
T Consensus 115 ~~~~~~~~lV~e~l~G~~~L~~~l~~ 140 (239)
T PRK01723 115 HGLFYRADILIERIEGARDLVALLQE 140 (239)
T ss_pred cCcceeeeEEEEecCCCCCHHHHHhc
Confidence 2 23599999997 699988864
No 482
>PF13306 LRR_5: Leucine rich repeats (6 copies); PDB: 3ZYJ_A 3V47_B 3V44_A 3ZYN_A 3ZYO_A 3SB4_A.
Probab=97.37 E-value=0.00059 Score=57.94 Aligned_cols=122 Identities=17% Similarity=0.221 Sum_probs=45.1
Q ss_pred cccCCCCCcEEeCccCcCcCCCChhhhCCCCCCEEEcccCccccccchhhccCCCCCEEEcCCccCccCcchhhhcccCC
Q 044615 213 GHGMLSSLIQLTLNNNELSGQLSPELGSLIQLEYLDLSANTFHKSIPESLSNLVKLHYLNLSNNQFSQKIPNKIEKLIHL 292 (571)
Q Consensus 213 ~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L 292 (571)
.|...++|+.+.+.. .+.......|.++++|+.+.+.++ +.......|.++++|+.+.+.+ .+.......|..+++|
T Consensus 7 ~F~~~~~l~~i~~~~-~~~~I~~~~F~~~~~l~~i~~~~~-~~~i~~~~F~~~~~l~~i~~~~-~~~~i~~~~F~~~~~l 83 (129)
T PF13306_consen 7 AFYNCSNLESITFPN-TIKKIGENAFSNCTSLKSINFPNN-LTSIGDNAFSNCKSLESITFPN-NLKSIGDNAFSNCTNL 83 (129)
T ss_dssp TTTT-TT--EEEETS-T--EE-TTTTTT-TT-SEEEESST-TSCE-TTTTTT-TT-EEEEETS-TT-EE-TTTTTT-TTE
T ss_pred HHhCCCCCCEEEECC-CeeEeChhhccccccccccccccc-ccccceeeeecccccccccccc-cccccccccccccccc
Confidence 344444555555443 333333444555555555555543 3333334455555566666644 3322333445555566
Q ss_pred CEEEccCCcCCcccchhccCCCCCCEEEccCCcCccccccccccCCCC
Q 044615 293 SELDLSHNIFREEIPSQICSMQSLEKLNLSHNNLSGSIPRCFEEMHWL 340 (571)
Q Consensus 293 ~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L 340 (571)
+.+++..+ +.......|.+. .|+.+.+.. .++.....+|.++++|
T Consensus 84 ~~i~~~~~-~~~i~~~~f~~~-~l~~i~~~~-~~~~i~~~~F~~~~~l 128 (129)
T PF13306_consen 84 KNIDIPSN-ITEIGSSSFSNC-NLKEINIPS-NITKIEENAFKNCTKL 128 (129)
T ss_dssp CEEEETTT--BEEHTTTTTT--T--EEE-TT-B-SS----GGG-----
T ss_pred cccccCcc-ccEEchhhhcCC-CceEEEECC-CccEECCccccccccC
Confidence 66665543 333344445554 566665554 3333444455555443
No 483
>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=97.36 E-value=0.00013 Score=80.56 Aligned_cols=98 Identities=23% Similarity=0.277 Sum_probs=69.4
Q ss_pred HccCCCccCeeeccCcceEEEEEcCCCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhcC---CCCcccEEEEEEeCCee
Q 044615 460 ATNNFDDGHCIGNGGQGSVYKAKLPTGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKIR---HRNIVKFYGFCSHALHS 536 (571)
Q Consensus 460 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~---H~niv~l~~~~~~~~~~ 536 (571)
....|.+.+.+|+|+||+||+|...+|+.||+|+=.+....+ |---.+++.|++ -+.|.++..++.-.+.-
T Consensus 696 ~~~~~~I~~e~G~g~y~~vy~a~~~~~~~~alK~e~P~~~WE------fYI~~q~~~RLk~~~~~~~~~~~~a~~~~~~S 769 (974)
T KOG1166|consen 696 GGEKFCISKEIGEGSYGSVYVATHSNGKLVALKVEKPPNPWE------FYICLQVMERLKPQMLPSIMHISSAHVFQNAS 769 (974)
T ss_pred cceeEEEEeeeccccceEEEEeecCCCcEEEEEeecCCCcee------eeehHHHHHhhchhhhcchHHHHHHHccCCcc
Confidence 345688889999999999999997779999999976554332 111123444554 23455555556667778
Q ss_pred EEEEeccCCCChhhhhccCCCccCCCHHHH
Q 044615 537 FVVYEYLEMGSLAMNLSNDAAAEQFCWTKR 566 (571)
Q Consensus 537 ~lv~e~~~~G~L~~~l~~~~~~~~l~w~~r 566 (571)
++|+||.+.|+|.+++. ....++|...
T Consensus 770 ~lv~ey~~~Gtlld~~N---~~~~m~e~lv 796 (974)
T KOG1166|consen 770 VLVSEYSPYGTLLDLIN---TNKVMDEYLV 796 (974)
T ss_pred eeeeeccccccHHHhhc---cCCCCCchhh
Confidence 89999999999999998 3334666543
No 484
>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]
Probab=97.35 E-value=7.6e-05 Score=74.98 Aligned_cols=91 Identities=20% Similarity=0.291 Sum_probs=73.9
Q ss_pred cCCCccCeeeccCcceEEEEE-cCCCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhcC------CCCcccEEEEEEeCC
Q 044615 462 NNFDDGHCIGNGGQGSVYKAK-LPTGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKIR------HRNIVKFYGFCSHAL 534 (571)
Q Consensus 462 ~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~------H~niv~l~~~~~~~~ 534 (571)
..|.+....|+|-|+.|.+|. ...|..||||+|...... .+.=.+|+++|++++ --++++++..|...+
T Consensus 432 ~RY~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnNE~M----~KtGl~EleiLkKL~~AD~Edk~Hclrl~r~F~hkn 507 (752)
T KOG0670|consen 432 SRYEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRNNEVM----HKTGLKELEILKKLNDADPEDKFHCLRLFRHFKHKN 507 (752)
T ss_pred ceeEEEeccccceeeeeeeccccCCCCeeEEEEeecchHH----hhhhhHHHHHHHHhhccCchhhhHHHHHHHHhhhcc
Confidence 458888899999999999998 557889999999754322 234458999999984 237899999999999
Q ss_pred eeEEEEeccCCCChhhhhccCCC
Q 044615 535 HSFVVYEYLEMGSLAMNLSNDAA 557 (571)
Q Consensus 535 ~~~lv~e~~~~G~L~~~l~~~~~ 557 (571)
++|||+|-+.. +|.+.|+.-+.
T Consensus 508 HLClVFE~Lsl-NLRevLKKyG~ 529 (752)
T KOG0670|consen 508 HLCLVFEPLSL-NLREVLKKYGR 529 (752)
T ss_pred eeEEEehhhhc-hHHHHHHHhCc
Confidence 99999998765 89999986544
No 485
>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins. This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain
Probab=97.29 E-value=0.00068 Score=63.64 Aligned_cols=84 Identities=14% Similarity=0.165 Sum_probs=63.3
Q ss_pred CeeeccCcceEEEEEcCCCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhcCC--CCcccEEEEEEeCC---eeEEEEec
Q 044615 468 HCIGNGGQGSVYKAKLPTGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKIRH--RNIVKFYGFCSHAL---HSFVVYEY 542 (571)
Q Consensus 468 ~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~H--~niv~l~~~~~~~~---~~~lv~e~ 542 (571)
+.++.|.++.||++...+|+.+++|........ .....+.+|+++++.+.+ ..+.+++++..... ..++||||
T Consensus 4 ~~l~~G~~n~~~~v~~~~g~~~ilK~~~~~~~~--~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~~~~~~~~v~e~ 81 (223)
T cd05154 4 RQLSGGQSNLTYLLTAGGGRRLVLRRPPPGALL--PSAHDVAREYRVLRALAGTGVPVPKVLALCEDPSVLGTPFYVMER 81 (223)
T ss_pred eecCCCccceEEEEEecCCcceEEEeCCCcccC--cccccHHHHHHHHHHhhCCCCCCCCEEEECCCCCccCCceEEEEE
Confidence 568999999999998766788999997654321 123567899999999876 34677777776542 56899999
Q ss_pred cCCCChhhhhc
Q 044615 543 LEMGSLAMNLS 553 (571)
Q Consensus 543 ~~~G~L~~~l~ 553 (571)
++|+++.+.+.
T Consensus 82 i~G~~l~~~~~ 92 (223)
T cd05154 82 VDGRVLRDRLL 92 (223)
T ss_pred eCCEecCCCCC
Confidence 99998877653
No 486
>PF13306 LRR_5: Leucine rich repeats (6 copies); PDB: 3ZYJ_A 3V47_B 3V44_A 3ZYN_A 3ZYO_A 3SB4_A.
Probab=97.19 E-value=0.0016 Score=55.30 Aligned_cols=84 Identities=20% Similarity=0.226 Sum_probs=37.4
Q ss_pred cccCCCCCCEEecccCcCcccccccccCCCCCCEEEcccCcCcccccccccCCCCCCeeecccCcCcccCCccccCCCCC
Q 044615 92 EIGNMKSLSDLQLSENILNGSIPLALGNLTNLVVLDLSTNKLSGSIPLSFANLTSLSILYLYENSLCDSIPKEIGNMNSL 171 (571)
Q Consensus 92 ~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L 171 (571)
.|.++++|+.+.+.. .+.......|.++++|+.+.+..+ +.......|.++++|+.+.+.+ .+.......|..+++|
T Consensus 7 ~F~~~~~l~~i~~~~-~~~~I~~~~F~~~~~l~~i~~~~~-~~~i~~~~F~~~~~l~~i~~~~-~~~~i~~~~F~~~~~l 83 (129)
T PF13306_consen 7 AFYNCSNLESITFPN-TIKKIGENAFSNCTSLKSINFPNN-LTSIGDNAFSNCKSLESITFPN-NLKSIGDNAFSNCTNL 83 (129)
T ss_dssp TTTT-TT--EEEETS-T--EE-TTTTTT-TT-SEEEESST-TSCE-TTTTTT-TT-EEEEETS-TT-EE-TTTTTT-TTE
T ss_pred HHhCCCCCCEEEECC-CeeEeChhhccccccccccccccc-ccccceeeeecccccccccccc-cccccccccccccccc
Confidence 355556666666653 344444555666666666666554 4444445556665566666643 3222233345555555
Q ss_pred CEEEccC
Q 044615 172 SILDLSS 178 (571)
Q Consensus 172 ~~L~L~~ 178 (571)
+.+++..
T Consensus 84 ~~i~~~~ 90 (129)
T PF13306_consen 84 KNIDIPS 90 (129)
T ss_dssp CEEEETT
T ss_pred cccccCc
Confidence 5555544
No 487
>KOG2739 consensus Leucine-rich acidic nuclear protein [Cell cycle control, cell division, chromosome partitioning; General function prediction only]
Probab=97.11 E-value=0.0002 Score=66.25 Aligned_cols=64 Identities=27% Similarity=0.391 Sum_probs=25.7
Q ss_pred CCCCCCEEEcccC--cCcccccccccCCCCCCeeecccCcCccc-CCccccCCCCCCEEEccCCCCC
Q 044615 119 NLTNLVVLDLSTN--KLSGSIPLSFANLTSLSILYLYENSLCDS-IPKEIGNMNSLSILDLSSNKLN 182 (571)
Q Consensus 119 ~l~~L~~L~L~~n--~i~~~~~~~~~~l~~L~~L~L~~n~l~~~-~~~~l~~l~~L~~L~L~~n~l~ 182 (571)
.|++|+.|.++.| ++.+.++.....+|+|++|+|++|.+... --..+..+++|..|++.+|..+
T Consensus 63 ~Lp~LkkL~lsdn~~~~~~~l~vl~e~~P~l~~l~ls~Nki~~lstl~pl~~l~nL~~Ldl~n~~~~ 129 (260)
T KOG2739|consen 63 KLPKLKKLELSDNYRRVSGGLEVLAEKAPNLKVLNLSGNKIKDLSTLRPLKELENLKSLDLFNCSVT 129 (260)
T ss_pred CcchhhhhcccCCcccccccceehhhhCCceeEEeecCCccccccccchhhhhcchhhhhcccCCcc
Confidence 3444444444444 33332222233334444444444444310 0011233444455555555443
No 488
>KOG2739 consensus Leucine-rich acidic nuclear protein [Cell cycle control, cell division, chromosome partitioning; General function prediction only]
Probab=96.92 E-value=0.00037 Score=64.51 Aligned_cols=40 Identities=38% Similarity=0.397 Sum_probs=18.4
Q ss_pred cCCCCCEEEcCCc--cCccCcchhhhcccCCCEEEccCCcCC
Q 044615 264 NLVKLHYLNLSNN--QFSQKIPNKIEKLIHLSELDLSHNIFR 303 (571)
Q Consensus 264 ~l~~L~~L~Ls~n--~l~~~~~~~~~~l~~L~~L~Ls~n~l~ 303 (571)
.+++|+.|.++.| .+++.++.....+++|+.|++++|++.
T Consensus 63 ~Lp~LkkL~lsdn~~~~~~~l~vl~e~~P~l~~l~ls~Nki~ 104 (260)
T KOG2739|consen 63 KLPKLKKLELSDNYRRVSGGLEVLAEKAPNLKVLNLSGNKIK 104 (260)
T ss_pred CcchhhhhcccCCcccccccceehhhhCCceeEEeecCCccc
Confidence 3444555555555 333333333333455555555555543
No 489
>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]
Probab=96.82 E-value=0.00037 Score=66.09 Aligned_cols=89 Identities=20% Similarity=0.312 Sum_probs=68.7
Q ss_pred CCCccCeeeccCcceEEEEE-cCCCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhcCCCCcccEEEEEEeC------Ce
Q 044615 463 NFDDGHCIGNGGQGSVYKAK-LPTGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKIRHRNIVKFYGFCSHA------LH 535 (571)
Q Consensus 463 ~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~------~~ 535 (571)
.|.-...+|.|+- .|..+. .-.++.||+|+.... .......++..+|..++..+.|+||++++.+|... ..
T Consensus 18 Ry~nL~p~~~g~~-~v~~a~D~v~~~~v~ikk~~~p-f~n~~~akra~rel~l~~~v~~~nii~l~n~ftP~~~l~~~~e 95 (369)
T KOG0665|consen 18 RYVNLKPIGSGAQ-IVVAAFDQVLGRPVAIKKLSRP-FQNQTHAKRAYRELKLMKCVNHKNIISLLNVFTPQKTLEEFQE 95 (369)
T ss_pred eeeeecccCCCCc-eEEecchhhccCceehhhhcCc-cccCccchhhhhhhhhhhhhcccceeeeeeccCccccHHHHHh
Confidence 3666677888876 555555 337899999998765 33345567788999999999999999999999654 35
Q ss_pred eEEEEeccCCCChhhhhcc
Q 044615 536 SFVVYEYLEMGSLAMNLSN 554 (571)
Q Consensus 536 ~~lv~e~~~~G~L~~~l~~ 554 (571)
.|+|||||.. +|...++.
T Consensus 96 ~y~v~e~m~~-nl~~vi~~ 113 (369)
T KOG0665|consen 96 VYLVMELMDA-NLCQVILM 113 (369)
T ss_pred HHHHHHhhhh-HHHHHHHH
Confidence 7999999974 89888873
No 490
>cd05151 ChoK Choline Kinase (ChoK). The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph
Probab=96.76 E-value=0.0032 Score=56.27 Aligned_cols=77 Identities=16% Similarity=0.090 Sum_probs=55.0
Q ss_pred cCeeeccCcceEEEEEcCCCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhcCCCCcc-cEEEEEEeCCeeEEEEeccCC
Q 044615 467 GHCIGNGGQGSVYKAKLPTGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKIRHRNIV-KFYGFCSHALHSFVVYEYLEM 545 (571)
Q Consensus 467 ~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~H~niv-~l~~~~~~~~~~~lv~e~~~~ 545 (571)
.+.++.|.++.||++... +..|++|........ ...+.+|++++..+.+.+++ +++++. ....++||||++|
T Consensus 3 ~~~l~~G~~~~vy~~~~~-~~~~~lK~~~~~~~~----~~~~~~E~~~l~~l~~~~~~P~~~~~~--~~~~~lv~e~i~G 75 (170)
T cd05151 3 ISPLKGGMTNKNYRVEVA-NKKYVVRIPGNGTEL----LINRENEAENSKLAAEAGIGPKLYYFD--PETGVLITEFIEG 75 (170)
T ss_pred eeecCCcccCceEEEEEC-CeEEEEEeCCCCccc----ccCHHHHHHHHHHHHHhCCCCceEEEe--CCCCeEEEEecCC
Confidence 356899999999999864 778999997644211 23467899999888666555 444433 3345799999999
Q ss_pred CChhh
Q 044615 546 GSLAM 550 (571)
Q Consensus 546 G~L~~ 550 (571)
.++.+
T Consensus 76 ~~l~~ 80 (170)
T cd05151 76 SELLT 80 (170)
T ss_pred Ccccc
Confidence 88864
No 491
>KOG2123 consensus Uncharacterized conserved protein [Function unknown]
Probab=96.64 E-value=0.00013 Score=67.74 Aligned_cols=98 Identities=20% Similarity=0.203 Sum_probs=51.9
Q ss_pred CCCEEEcccCccccccchhhccCCCCCEEEcCCccCccCcchhhhcccCCCEEEccCCcCCccc-chhccCCCCCCEEEc
Q 044615 243 QLEYLDLSANTFHKSIPESLSNLVKLHYLNLSNNQFSQKIPNKIEKLIHLSELDLSHNIFREEI-PSQICSMQSLEKLNL 321 (571)
Q Consensus 243 ~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~-~~~~~~l~~L~~L~L 321 (571)
+.+.|+.-++.++++ .....++.|+.|.||-|.|+..- .+..++.|++|+|..|.|.... -..+.++++|+.|+|
T Consensus 20 ~vkKLNcwg~~L~DI--sic~kMp~lEVLsLSvNkIssL~--pl~rCtrLkElYLRkN~I~sldEL~YLknlpsLr~LWL 95 (388)
T KOG2123|consen 20 NVKKLNCWGCGLDDI--SICEKMPLLEVLSLSVNKISSLA--PLQRCTRLKELYLRKNCIESLDELEYLKNLPSLRTLWL 95 (388)
T ss_pred HhhhhcccCCCccHH--HHHHhcccceeEEeeccccccch--hHHHHHHHHHHHHHhcccccHHHHHHHhcCchhhhHhh
Confidence 344444444444332 22344555666666666665332 2455566666666666654321 124566677777777
Q ss_pred cCCcCcccccc-----ccccCCCCCEEE
Q 044615 322 SHNNLSGSIPR-----CFEEMHWLSCID 344 (571)
Q Consensus 322 s~n~l~~~~p~-----~~~~l~~L~~L~ 344 (571)
..|+-.|..+. .+.-+|+|+.||
T Consensus 96 ~ENPCc~~ag~nYR~~VLR~LPnLkKLD 123 (388)
T KOG2123|consen 96 DENPCCGEAGQNYRRKVLRVLPNLKKLD 123 (388)
T ss_pred ccCCcccccchhHHHHHHHHcccchhcc
Confidence 77766554432 234456666655
No 492
>KOG2123 consensus Uncharacterized conserved protein [Function unknown]
Probab=96.46 E-value=0.00014 Score=67.55 Aligned_cols=79 Identities=30% Similarity=0.293 Sum_probs=34.9
Q ss_pred CCCCCCEEecccCcCcccccccccCCCCCCEEEcccCcCcccc-cccccCCCCCCeeecccCcCcccCCc-----cccCC
Q 044615 95 NMKSLSDLQLSENILNGSIPLALGNLTNLVVLDLSTNKLSGSI-PLSFANLTSLSILYLYENSLCDSIPK-----EIGNM 168 (571)
Q Consensus 95 ~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~-~~~~~~l~~L~~L~L~~n~l~~~~~~-----~l~~l 168 (571)
.|+.|++|.||-|.|+.. ..|..+++|+.|+|..|.|...- -..+.++++|+.|.|..|.=.+..+. .+.-|
T Consensus 39 kMp~lEVLsLSvNkIssL--~pl~rCtrLkElYLRkN~I~sldEL~YLknlpsLr~LWL~ENPCc~~ag~nYR~~VLR~L 116 (388)
T KOG2123|consen 39 KMPLLEVLSLSVNKISSL--APLQRCTRLKELYLRKNCIESLDELEYLKNLPSLRTLWLDENPCCGEAGQNYRRKVLRVL 116 (388)
T ss_pred hcccceeEEeeccccccc--hhHHHHHHHHHHHHHhcccccHHHHHHHhcCchhhhHhhccCCcccccchhHHHHHHHHc
Confidence 344444555554444422 22344444555555555443211 11234555555555555554433222 13345
Q ss_pred CCCCEEE
Q 044615 169 NSLSILD 175 (571)
Q Consensus 169 ~~L~~L~ 175 (571)
|+|+.||
T Consensus 117 PnLkKLD 123 (388)
T KOG2123|consen 117 PNLKKLD 123 (388)
T ss_pred ccchhcc
Confidence 5555553
No 493
>COG2112 Predicted Ser/Thr protein kinase [Signal transduction mechanisms]
Probab=96.17 E-value=0.012 Score=51.80 Aligned_cols=79 Identities=16% Similarity=0.156 Sum_probs=57.8
Q ss_pred ccCeeeccCcceEEEEEcCCCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhcCCCCcccEEEEEEeCCeeEEEEeccCC
Q 044615 466 DGHCIGNGGQGSVYKAKLPTGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKIRHRNIVKFYGFCSHALHSFVVYEYLEM 545 (571)
Q Consensus 466 ~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~ 545 (571)
..+.||+|.+|.||.|.+. |..+|+|+-..+. .+..+..|++++..+...++-+=+..+ +..++.|||+.|
T Consensus 26 v~~~L~KG~~s~Vyl~~~~-~~~~a~Kvrr~ds-----~r~~l~kEakiLeil~g~~~~p~vy~y---g~~~i~me~i~G 96 (201)
T COG2112 26 VEKELAKGTTSVVYLGEWR-GGEVALKVRRRDS-----PRRNLEKEAKILEILAGEGVTPEVYFY---GEDFIRMEYIDG 96 (201)
T ss_pred hhhhhhcccccEEEEeecc-CceEEEEEecCCc-----chhhHHHHHHHHHHhhhcCCCceEEEe---chhhhhhhhhcC
Confidence 4567999999999999984 5588999865432 246788999999998877776533333 223466999999
Q ss_pred CChhhhhc
Q 044615 546 GSLAMNLS 553 (571)
Q Consensus 546 G~L~~~l~ 553 (571)
-.|.+.-.
T Consensus 97 ~~L~~~~~ 104 (201)
T COG2112 97 RPLGKLEI 104 (201)
T ss_pred cchhhhhh
Confidence 78766554
No 494
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=95.95 E-value=0.0012 Score=68.38 Aligned_cols=86 Identities=17% Similarity=0.255 Sum_probs=69.0
Q ss_pred eeeccCcceEEEEE----cCCCCEEEEEEccCCCCCchHhHHHHHHHHHHHhhcC-CCCcccEEEEEEeCCeeEEEEecc
Q 044615 469 CIGNGGQGSVYKAK----LPTGEIVDVKKFHSPLPDEMACQQEFLNEVNALTKIR-HRNIVKFYGFCSHALHSFVVYEYL 543 (571)
Q Consensus 469 ~lg~G~~g~V~~~~----~~~~~~vavK~~~~~~~~~~~~~~~~~~Ei~~l~~l~-H~niv~l~~~~~~~~~~~lv~e~~ 543 (571)
++|+|+||.|+.++ ...|..+|+|.+.+..... +.......|..++..++ ||.+|+++..+++....+++++|.
T Consensus 1 vlg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~-~~~~~t~~er~il~~~~~~~f~v~lhyafqt~~kl~l~ld~~ 79 (612)
T KOG0603|consen 1 VLGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKV-RDRTHTKQERIILAFVHNTPFLVKLHYAFQTDGKLYLILDFL 79 (612)
T ss_pred CCCcCCCcchHHHHHhccccccchhhhhccccccccc-ccccccccHHHHHhhccCCCceeeeeeeeccccchhHhhhhc
Confidence 36999999999775 2357789999987654332 22225667788888887 999999999999999999999999
Q ss_pred CCCChhhhhccC
Q 044615 544 EMGSLAMNLSND 555 (571)
Q Consensus 544 ~~G~L~~~l~~~ 555 (571)
.||+++..+.+.
T Consensus 80 rgg~lft~l~~~ 91 (612)
T KOG0603|consen 80 RGGDLFTRLSKE 91 (612)
T ss_pred ccchhhhccccC
Confidence 999999888754
No 495
>KOG1947 consensus Leucine rich repeat proteins, some proteins contain F-box [General function prediction only]
Probab=95.60 E-value=0.0016 Score=68.98 Aligned_cols=15 Identities=33% Similarity=0.188 Sum_probs=7.2
Q ss_pred ccCCCCCEEEcCCcc
Q 044615 263 SNLVKLHYLNLSNNQ 277 (571)
Q Consensus 263 ~~l~~L~~L~Ls~n~ 277 (571)
..+++++.+.+..+.
T Consensus 359 ~~~~~l~~~~l~~~~ 373 (482)
T KOG1947|consen 359 RSCPKLTDLSLSYCG 373 (482)
T ss_pred hcCCCcchhhhhhhh
Confidence 344445555544444
No 496
>PF00560 LRR_1: Leucine Rich Repeat; InterPro: IPR001611 Leucine-rich repeats (LRR) consist of 2-45 motifs of 20-30 amino acids in length that generally folds into an arc or horseshoe shape []. LRRs occur in proteins ranging from viruses to eukaryotes, and appear to provide a structural framework for the formation of protein-protein interactions [, ].Proteins containing LRRs include tyrosine kinase receptors, cell-adhesion molecules, virulence factors, and extracellular matrix-binding glycoproteins, and are involved in a variety of biological processes, including signal transduction, cell adhesion, DNA repair, recombination, transcription, RNA processing, disease resistance, apoptosis, and the immune response []. Sequence analyses of LRR proteins suggested the existence of several different subfamilies of LRRs. The significance of this classification is that repeats from different subfamilies never occur simultaneously and have most probably evolved independently. It is, however, now clear that all major classes of LRR have curved horseshoe structures with a parallel beta sheet on the concave side and mostly helical elements on the convex side. At least six families of LRR proteins, characterised by different lengths and consensus sequences of the repeats, have been identified. Eleven-residue segments of the LRRs (LxxLxLxxN/CxL), corresponding to the beta-strand and adjacent loop regions, are conserved in LRR proteins, whereas the remaining parts of the repeats (herein termed variable) may be very different. Despite the differences, each of the variable parts contains two half-turns at both ends and a "linear" segment (as the chain follows a linear path overall), usually formed by a helix, in the middle. The concave face and the adjacent loops are the most common protein interaction surfaces on LRR proteins. 3D structure of some LRR proteins-ligand complexes show that the concave surface of LRR domain is ideal for interaction with alpha-helix, thus supporting earlier conclusions that the elongated and curved LRR structure provides an outstanding framework for achieving diverse protein-protein interactions []. Molecular modeling suggests that the conserved pattern LxxLxL, which is shorter than the previously proposed LxxLxLxxN/CxL is sufficient to impart the characteristic horseshoe curvature to proteins with 20- to 30-residue repeats []. ; GO: 0005515 protein binding; PDB: 4ECO_B 2A0Z_A 3ULU_A 1ZIW_A 3ULV_A 1DCE_C 1LTX_A 3J0A_B 3A79_B 4FCG_A ....
Probab=95.25 E-value=0.0086 Score=33.08 Aligned_cols=18 Identities=50% Similarity=0.593 Sum_probs=8.4
Q ss_pred CCEEecccCcCcccccccc
Q 044615 99 LSDLQLSENILNGSIPLAL 117 (571)
Q Consensus 99 L~~L~L~~n~i~~~~~~~~ 117 (571)
|++|||++|+++ .+|..|
T Consensus 2 L~~Ldls~n~l~-~ip~~~ 19 (22)
T PF00560_consen 2 LEYLDLSGNNLT-SIPSSF 19 (22)
T ss_dssp ESEEEETSSEES-EEGTTT
T ss_pred ccEEECCCCcCE-eCChhh
Confidence 445555555554 344333
No 497
>KOG4341 consensus F-box protein containing LRR [General function prediction only]
Probab=95.14 E-value=0.0014 Score=64.43 Aligned_cols=277 Identities=18% Similarity=0.089 Sum_probs=0.0
Q ss_pred CccceeecccccccCCCCCCCccccccccCCCCCCEEecccC-cCcccccccc-cCCCCCCEEEccc-CcCcccccc-cc
Q 044615 66 TFEATAHFSVLAFTGQDWPLYSSIPDEIGNMKSLSDLQLSEN-ILNGSIPLAL-GNLTNLVVLDLST-NKLSGSIPL-SF 141 (571)
Q Consensus 66 ~~l~~l~l~~n~l~~~~~~~~~~~p~~~~~l~~L~~L~L~~n-~i~~~~~~~~-~~l~~L~~L~L~~-n~i~~~~~~-~~ 141 (571)
.+|+.|.++++.=.+.. .+-....++++++.|++.++ .++...-..+ ..+++|+.|+|.. -.++...-. -.
T Consensus 138 g~lk~LSlrG~r~v~~s-----slrt~~~~CpnIehL~l~gc~~iTd~s~~sla~~C~~l~~l~L~~c~~iT~~~Lk~la 212 (483)
T KOG4341|consen 138 GFLKELSLRGCRAVGDS-----SLRTFASNCPNIEHLALYGCKKITDSSLLSLARYCRKLRHLNLHSCSSITDVSLKYLA 212 (483)
T ss_pred cccccccccccccCCcc-----hhhHHhhhCCchhhhhhhcceeccHHHHHHHHHhcchhhhhhhcccchhHHHHHHHHH
Q ss_pred cCCCCCCeeecccCcCccc--CCccccCCCCCCEEEccCCCCCccCChhhhhccCC---CcEEEccCCcccccCCccc--
Q 044615 142 ANLTSLSILYLYENSLCDS--IPKEIGNMNSLSILDLSSNKLNGSIPLSLANLTNS---LKVLYLSSNHIVGEIPLGH-- 214 (571)
Q Consensus 142 ~~l~~L~~L~L~~n~l~~~--~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~~---L~~L~l~~n~~~~~~~~~~-- 214 (571)
..+++|++|+++.+.--.. +.....++..++.+.+.+|. ..--..+...... +..+++..+..-.......
T Consensus 213 ~gC~kL~~lNlSwc~qi~~~gv~~~~rG~~~l~~~~~kGC~--e~~le~l~~~~~~~~~i~~lnl~~c~~lTD~~~~~i~ 290 (483)
T KOG4341|consen 213 EGCRKLKYLNLSWCPQISGNGVQALQRGCKELEKLSLKGCL--ELELEALLKAAAYCLEILKLNLQHCNQLTDEDLWLIA 290 (483)
T ss_pred HhhhhHHHhhhccCchhhcCcchHHhccchhhhhhhhcccc--cccHHHHHHHhccChHhhccchhhhccccchHHHHHh
Q ss_pred cCCCCCcEEeCccCcCcCCCChh--hhCCCCCCEEEcccCc-cccccchhh-ccCCCCCEEEcCCccC--ccCcchhhhc
Q 044615 215 GMLSSLIQLTLNNNELSGQLSPE--LGSLIQLEYLDLSANT-FHKSIPESL-SNLVKLHYLNLSNNQF--SQKIPNKIEK 288 (571)
Q Consensus 215 ~~l~~L~~L~l~~n~l~~~~~~~--~~~l~~L~~L~L~~n~-l~~~~~~~l-~~l~~L~~L~Ls~n~l--~~~~~~~~~~ 288 (571)
..+..|+.|+.+++.-.+..+-+ -.+.++|+.|.++.++ |+..-...+ .+++.|+.+++.++.. .+.+-..-.+
T Consensus 291 ~~c~~lq~l~~s~~t~~~d~~l~aLg~~~~~L~~l~l~~c~~fsd~~ft~l~rn~~~Le~l~~e~~~~~~d~tL~sls~~ 370 (483)
T KOG4341|consen 291 CGCHALQVLCYSSCTDITDEVLWALGQHCHNLQVLELSGCQQFSDRGFTMLGRNCPHLERLDLEECGLITDGTLASLSRN 370 (483)
T ss_pred hhhhHhhhhcccCCCCCchHHHHHHhcCCCceEEEeccccchhhhhhhhhhhcCChhhhhhcccccceehhhhHhhhccC
Q ss_pred ccCCCEEEccCCcCCccc-----chhccCCCCCCEEEccCCcC-ccccccccccCCCCCEEECcCCc
Q 044615 289 LIHLSELDLSHNIFREEI-----PSQICSMQSLEKLNLSHNNL-SGSIPRCFEEMHWLSCIDISYNA 349 (571)
Q Consensus 289 l~~L~~L~Ls~n~l~~~~-----~~~~~~l~~L~~L~Ls~n~l-~~~~p~~~~~l~~L~~L~ls~N~ 349 (571)
.+.|+.|.++++...... ...-+++..|+.+.|++++. +...-+.+..++.|+.+++-..+
T Consensus 371 C~~lr~lslshce~itD~gi~~l~~~~c~~~~l~~lEL~n~p~i~d~~Le~l~~c~~Leri~l~~~q 437 (483)
T KOG4341|consen 371 CPRLRVLSLSHCELITDEGIRHLSSSSCSLEGLEVLELDNCPLITDATLEHLSICRNLERIELIDCQ 437 (483)
T ss_pred CchhccCChhhhhhhhhhhhhhhhhccccccccceeeecCCCCchHHHHHHHhhCcccceeeeechh
No 498
>PF00560 LRR_1: Leucine Rich Repeat; InterPro: IPR001611 Leucine-rich repeats (LRR) consist of 2-45 motifs of 20-30 amino acids in length that generally folds into an arc or horseshoe shape []. LRRs occur in proteins ranging from viruses to eukaryotes, and appear to provide a structural framework for the formation of protein-protein interactions [, ].Proteins containing LRRs include tyrosine kinase receptors, cell-adhesion molecules, virulence factors, and extracellular matrix-binding glycoproteins, and are involved in a variety of biological processes, including signal transduction, cell adhesion, DNA repair, recombination, transcription, RNA processing, disease resistance, apoptosis, and the immune response []. Sequence analyses of LRR proteins suggested the existence of several different subfamilies of LRRs. The significance of this classification is that repeats from different subfamilies never occur simultaneously and have most probably evolved independently. It is, however, now clear that all major classes of LRR have curved horseshoe structures with a parallel beta sheet on the concave side and mostly helical elements on the convex side. At least six families of LRR proteins, characterised by different lengths and consensus sequences of the repeats, have been identified. Eleven-residue segments of the LRRs (LxxLxLxxN/CxL), corresponding to the beta-strand and adjacent loop regions, are conserved in LRR proteins, whereas the remaining parts of the repeats (herein termed variable) may be very different. Despite the differences, each of the variable parts contains two half-turns at both ends and a "linear" segment (as the chain follows a linear path overall), usually formed by a helix, in the middle. The concave face and the adjacent loops are the most common protein interaction surfaces on LRR proteins. 3D structure of some LRR proteins-ligand complexes show that the concave surface of LRR domain is ideal for interaction with alpha-helix, thus supporting earlier conclusions that the elongated and curved LRR structure provides an outstanding framework for achieving diverse protein-protein interactions []. Molecular modeling suggests that the conserved pattern LxxLxL, which is shorter than the previously proposed LxxLxLxxN/CxL is sufficient to impart the characteristic horseshoe curvature to proteins with 20- to 30-residue repeats []. ; GO: 0005515 protein binding; PDB: 4ECO_B 2A0Z_A 3ULU_A 1ZIW_A 3ULV_A 1DCE_C 1LTX_A 3J0A_B 3A79_B 4FCG_A ....
Probab=95.00 E-value=0.011 Score=32.69 Aligned_cols=21 Identities=67% Similarity=0.865 Sum_probs=11.2
Q ss_pred CCCEEEcccCcCcccccccccC
Q 044615 122 NLVVLDLSTNKLSGSIPLSFAN 143 (571)
Q Consensus 122 ~L~~L~L~~n~i~~~~~~~~~~ 143 (571)
+|++|||++|+++ .+|..|++
T Consensus 1 ~L~~Ldls~n~l~-~ip~~~~~ 21 (22)
T PF00560_consen 1 NLEYLDLSGNNLT-SIPSSFSN 21 (22)
T ss_dssp TESEEEETSSEES-EEGTTTTT
T ss_pred CccEEECCCCcCE-eCChhhcC
Confidence 3556666666665 44444443
No 499
>KOG1947 consensus Leucine rich repeat proteins, some proteins contain F-box [General function prediction only]
Probab=94.93 E-value=0.0038 Score=66.21 Aligned_cols=32 Identities=28% Similarity=0.064 Sum_probs=18.7
Q ss_pred hhhCCCCCCEEEcccCcccccc-chhhccCCCC
Q 044615 237 ELGSLIQLEYLDLSANTFHKSI-PESLSNLVKL 268 (571)
Q Consensus 237 ~~~~l~~L~~L~L~~n~l~~~~-~~~l~~l~~L 268 (571)
....+++++.+.+..+...... ...+.++++|
T Consensus 357 ~~~~~~~l~~~~l~~~~~~~~~~~~~l~gc~~l 389 (482)
T KOG1947|consen 357 ILRSCPKLTDLSLSYCGISDLGLELSLRGCPNL 389 (482)
T ss_pred HHhcCCCcchhhhhhhhccCcchHHHhcCCccc
Confidence 4566788888888777643222 2334555555
No 500
>KOG4308 consensus LRR-containing protein [Function unknown]
Probab=94.73 E-value=0.00034 Score=72.86 Aligned_cols=36 Identities=42% Similarity=0.416 Sum_probs=18.2
Q ss_pred CCEEecccCcCcccc----cccccCCCCCCEEEcccCcCc
Q 044615 99 LSDLQLSENILNGSI----PLALGNLTNLVVLDLSTNKLS 134 (571)
Q Consensus 99 L~~L~L~~n~i~~~~----~~~~~~l~~L~~L~L~~n~i~ 134 (571)
+..|+|.+|.+.... ...+.....|+.|++++|.+.
T Consensus 89 l~~L~L~~~~l~~~~~~~l~~~l~t~~~L~~L~l~~n~l~ 128 (478)
T KOG4308|consen 89 LLHLSLANNRLGDRGAEELAQALKTLPTLGQLDLSGNNLG 128 (478)
T ss_pred HHHhhhhhCccccchHHHHHHHhcccccHhHhhcccCCCc
Confidence 555666666555332 223344455555555555554
Done!