Query 044616
Match_columns 87
No_of_seqs 142 out of 702
Neff 5.9
Searched_HMMs 29240
Date Mon Mar 25 08:26:14 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/044616.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/044616hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3okp_A GDP-mannose-dependent a 98.7 4.4E-08 1.5E-12 70.0 7.2 65 2-70 141-227 (394)
2 2iw1_A Lipopolysaccharide core 98.7 6.9E-08 2.4E-12 68.6 7.7 65 2-69 137-224 (374)
3 3oy2_A Glycosyltransferase B73 98.7 3.3E-08 1.1E-12 71.8 5.7 64 2-70 132-213 (413)
4 3c48_A Predicted glycosyltrans 98.6 1.5E-07 5.2E-12 68.6 7.8 75 2-86 185-281 (438)
5 3fro_A GLGA glycogen synthase; 98.6 2.5E-07 8.6E-12 66.7 8.0 76 2-87 189-291 (439)
6 2jjm_A Glycosyl transferase, g 98.5 2.9E-07 1E-11 66.6 7.8 64 2-69 157-239 (394)
7 2gek_A Phosphatidylinositol ma 98.5 1.9E-07 6.3E-12 67.1 5.4 64 1-70 160-238 (406)
8 2r60_A Glycosyl transferase, g 98.5 2E-07 6.8E-12 69.8 5.5 67 2-71 191-292 (499)
9 2qzs_A Glycogen synthase; glyc 98.4 7.4E-07 2.5E-11 66.2 6.3 67 2-68 205-319 (485)
10 1rzu_A Glycogen synthase 1; gl 98.3 4.8E-07 1.6E-11 67.3 4.9 64 2-68 207-318 (485)
11 2x0d_A WSAF; GT4 family, trans 98.3 6.3E-07 2.1E-11 67.4 5.6 62 4-70 197-271 (413)
12 2iuy_A Avigt4, glycosyltransfe 98.2 7.8E-07 2.7E-11 63.2 3.9 57 2-66 120-187 (342)
13 3vue_A GBSS-I, granule-bound s 98.1 1.2E-05 4.1E-10 62.7 8.1 69 1-69 241-355 (536)
14 3s28_A Sucrose synthase 1; gly 98.1 3.4E-06 1.2E-10 69.5 4.9 77 2-87 475-609 (816)
15 2x6q_A Trehalose-synthase TRET 98.0 4E-06 1.4E-10 61.0 3.2 59 3-70 178-260 (416)
16 3beo_A UDP-N-acetylglucosamine 97.3 0.00024 8.1E-09 50.5 4.6 65 2-70 151-236 (375)
17 3nb0_A Glycogen [starch] synth 97.2 0.002 6.9E-08 53.0 9.2 66 1-71 260-363 (725)
18 1vgv_A UDP-N-acetylglucosamine 97.0 0.0015 5E-08 46.6 5.9 66 1-70 141-236 (384)
19 2hy7_A Glucuronosyltransferase 96.9 0.00016 5.3E-09 53.7 0.4 47 2-56 179-237 (406)
20 3qhp_A Type 1 capsular polysac 96.9 0.0012 4E-08 42.1 4.1 25 43-67 4-28 (166)
21 3t5t_A Putative glycosyltransf 96.8 0.0019 6.6E-08 50.7 5.8 79 1-86 207-319 (496)
22 2bfw_A GLGA glycogen synthase; 96.4 0.0038 1.3E-07 40.7 4.4 36 42-86 37-75 (200)
23 1uqt_A Alpha, alpha-trehalose- 96.3 0.0033 1.1E-07 48.5 3.9 39 43-86 257-295 (482)
24 1v4v_A UDP-N-acetylglucosamine 96.3 0.0054 1.8E-07 43.7 4.7 65 2-70 147-228 (376)
25 2f9f_A First mannosyl transfer 96.1 0.0081 2.8E-07 39.1 4.4 25 42-66 24-48 (177)
26 2xci_A KDO-transferase, 3-deox 95.7 0.027 9.2E-07 41.3 6.4 70 1-87 153-231 (374)
27 1f0k_A MURG, UDP-N-acetylgluco 93.3 0.028 9.5E-07 39.6 1.4 53 2-68 142-211 (364)
28 2vsy_A XCC0866; transferase, g 92.5 0.08 2.7E-06 39.8 3.1 34 43-86 378-411 (568)
29 2c4m_A Glycogen phosphorylase; 57.2 16 0.00054 30.4 5.0 32 37-68 512-544 (796)
30 3dzc_A UDP-N-acetylglucosamine 55.3 41 0.0014 24.4 6.6 66 1-70 166-261 (396)
31 1l5w_A Maltodextrin phosphoryl 54.9 19 0.00066 29.9 5.2 49 37-87 522-571 (796)
32 2gj4_A Glycogen phosphorylase, 39.4 50 0.0017 27.6 5.3 31 37-67 546-577 (824)
33 2ot8_C HnRNP M, heterogeneous 29.9 14 0.00048 18.4 0.4 11 46-56 17-27 (30)
34 2o6l_A UDP-glucuronosyltransfe 23.6 25 0.00085 21.8 0.8 25 43-67 24-51 (170)
No 1
>3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A*
Probab=98.69 E-value=4.4e-08 Score=69.96 Aligned_cols=65 Identities=18% Similarity=0.208 Sum_probs=55.9
Q ss_pred ccEEEEcCHHHHHHHHHHhhccccCCCCCeEEcCCCcCCC----------------------ceEEEEeccccccCHHHH
Q 044616 2 ADMILVNSKFTANTFANTFKKLHARGIRPAVLYPAVNVDQ----------------------LNFLSINRFERKKNIDLA 59 (87)
Q Consensus 2 ad~i~vNS~~T~~~i~~~~~~~~~~~~~~~VvYPpvd~~~----------------------~~~Lsv~r~~p~Kn~~la 59 (87)
||.+++.|+++++.+.+.++... +..|+++++|.+. +.++++||+.+.|+++.+
T Consensus 141 ~d~ii~~s~~~~~~~~~~~~~~~----~~~vi~ngv~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~~~~~Kg~~~l 216 (394)
T 3okp_A 141 VDVLTYISQYTLRRFKSAFGSHP----TFEHLPSGVDVKRFTPATPEDKSATRKKLGFTDTTPVIACNSRLVPRKGQDSL 216 (394)
T ss_dssp CSEEEESCHHHHHHHHHHHCSSS----EEEECCCCBCTTTSCCCCHHHHHHHHHHTTCCTTCCEEEEESCSCGGGCHHHH
T ss_pred CCEEEEcCHHHHHHHHHhcCCCC----CeEEecCCcCHHHcCCCCchhhHHHHHhcCCCcCceEEEEEeccccccCHHHH
Confidence 79999999999999999986421 4678999998753 259999999999999999
Q ss_pred HHHHHHcchhh
Q 044616 60 LSAFAMLQNLE 70 (87)
Q Consensus 60 i~Af~~l~~~~ 70 (87)
++|++.+.++.
T Consensus 217 i~a~~~l~~~~ 227 (394)
T 3okp_A 217 IKAMPQVIAAR 227 (394)
T ss_dssp HHHHHHHHHHS
T ss_pred HHHHHHHHhhC
Confidence 99999997664
No 2
>2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A*
Probab=98.67 E-value=6.9e-08 Score=68.64 Aligned_cols=65 Identities=17% Similarity=0.251 Sum_probs=55.6
Q ss_pred ccEEEEcCHHHHHHHHHHhhccccCCCCCeEEcCCCcCCC-----------------------ceEEEEeccccccCHHH
Q 044616 2 ADMILVNSKFTANTFANTFKKLHARGIRPAVLYPAVNVDQ-----------------------LNFLSINRFERKKNIDL 58 (87)
Q Consensus 2 ad~i~vNS~~T~~~i~~~~~~~~~~~~~~~VvYPpvd~~~-----------------------~~~Lsv~r~~p~Kn~~l 58 (87)
+|.|++.|+++++.+.+.|+.... +..|+++++|.+. +.++++||+.+.|+++.
T Consensus 137 ~d~ii~~s~~~~~~~~~~~~~~~~---~~~vi~ngv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~~~~~K~~~~ 213 (374)
T 2iw1_A 137 STKLMMLTDKQIADFQKHYQTEPE---RFQILPPGIYPDRKYSEQIPNSREIYRQKNGIKEQQNLLLQVGSDFGRKGVDR 213 (374)
T ss_dssp CCEEEESCHHHHHHHHHHHCCCGG---GEEECCCCCCGGGSGGGSCTTHHHHHHHHTTCCTTCEEEEEECSCTTTTTHHH
T ss_pred CcEEEEcCHHHHHHHHHHhCCChh---heEEecCCcCHHhcCcccchhHHHHHHHHhCCCCCCeEEEEeccchhhcCHHH
Confidence 799999999999999999875322 3678999998642 26899999999999999
Q ss_pred HHHHHHHcchh
Q 044616 59 ALSAFAMLQNL 69 (87)
Q Consensus 59 ai~Af~~l~~~ 69 (87)
+++|+..+.++
T Consensus 214 li~a~~~l~~~ 224 (374)
T 2iw1_A 214 SIEALASLPES 224 (374)
T ss_dssp HHHHHHTSCHH
T ss_pred HHHHHHHhHhc
Confidence 99999999776
No 3
>3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A*
Probab=98.65 E-value=3.3e-08 Score=71.84 Aligned_cols=64 Identities=19% Similarity=0.198 Sum_probs=54.1
Q ss_pred cc--EEEEcCHHHHHHHHHHhhccccCCCCCeEEcCCCcCCC----------------ceEEEEeccccccCHHHHHHHH
Q 044616 2 AD--MILVNSKFTANTFANTFKKLHARGIRPAVLYPAVNVDQ----------------LNFLSINRFERKKNIDLALSAF 63 (87)
Q Consensus 2 ad--~i~vNS~~T~~~i~~~~~~~~~~~~~~~VvYPpvd~~~----------------~~~Lsv~r~~p~Kn~~lai~Af 63 (87)
+| .++++|+++++.+.+ ++.. . +..|+++|+|.+. +.++++||+.++|+++.+++||
T Consensus 132 ~~~~~ii~~S~~~~~~~~~-~~~~-~---~~~vi~ngvd~~~~~~~~~~~~~~~~~~~~~il~vGr~~~~Kg~~~li~a~ 206 (413)
T 3oy2_A 132 PKVVGVMAMSKCWISDICN-YGCK-V---PINIVSHFVDTKTIYDARKLVGLSEYNDDVLFLNMNRNTARKRLDIYVLAA 206 (413)
T ss_dssp TTEEEEEESSTHHHHHHHH-TTCC-S---CEEECCCCCCCCCCTTHHHHTTCGGGTTSEEEECCSCSSGGGTHHHHHHHH
T ss_pred cCCceEEEcCHHHHHHHHH-cCCC-C---ceEEeCCCCCHHHHHHHHHhcCCCcccCceEEEEcCCCchhcCcHHHHHHH
Confidence 55 999999999999999 5531 1 5789999999842 2699999999999999999999
Q ss_pred HHcchhh
Q 044616 64 AMLQNLE 70 (87)
Q Consensus 64 ~~l~~~~ 70 (87)
+.+.++.
T Consensus 207 ~~l~~~~ 213 (413)
T 3oy2_A 207 ARFISKY 213 (413)
T ss_dssp HHHHHHC
T ss_pred HHHHHhC
Confidence 9987665
No 4
>3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A*
Probab=98.59 E-value=1.5e-07 Score=68.65 Aligned_cols=75 Identities=19% Similarity=0.282 Sum_probs=60.3
Q ss_pred ccEEEEcCHHHHHHHHHHhhccccCCCCCeEEcCCCcCCC----------------------ceEEEEeccccccCHHHH
Q 044616 2 ADMILVNSKFTANTFANTFKKLHARGIRPAVLYPAVNVDQ----------------------LNFLSINRFERKKNIDLA 59 (87)
Q Consensus 2 ad~i~vNS~~T~~~i~~~~~~~~~~~~~~~VvYPpvd~~~----------------------~~~Lsv~r~~p~Kn~~la 59 (87)
||.|+++|.++++.+.+.|+.... +..|+++++|.+. +.++++||+.++|+++.+
T Consensus 185 ~d~ii~~s~~~~~~~~~~~g~~~~---k~~vi~ngvd~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~~G~~~~~Kg~~~l 261 (438)
T 3c48_A 185 ADVLAVNTQEEMQDLMHHYDADPD---RISVVSPGADVELYSPGNDRATERSRRELGIPLHTKVVAFVGRLQPFKGPQVL 261 (438)
T ss_dssp CSEEEESSHHHHHHHHHHHCCCGG---GEEECCCCCCTTTSCCC----CHHHHHHTTCCSSSEEEEEESCBSGGGCHHHH
T ss_pred CCEEEEcCHHHHHHHHHHhCCChh---heEEecCCccccccCCcccchhhhhHHhcCCCCCCcEEEEEeeecccCCHHHH
Confidence 799999999999999998875322 3678999888542 258999999999999999
Q ss_pred HHHHHHcchhhhhhhhcCCCCceEEEE
Q 044616 60 LSAFAMLQNLEEDVFKNHNTADVTLTI 86 (87)
Q Consensus 60 i~Af~~l~~~~~~~~~~~~~~~~~LVi 86 (87)
++|+..+.++.+ + .+++|+|
T Consensus 262 i~a~~~l~~~~p----~---~~~~l~i 281 (438)
T 3c48_A 262 IKAVAALFDRDP----D---RNLRVII 281 (438)
T ss_dssp HHHHHHHHHHCT----T---CSEEEEE
T ss_pred HHHHHHHHhhCC----C---cceEEEE
Confidence 999999976643 0 3567765
No 5
>3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A*
Probab=98.56 E-value=2.5e-07 Score=66.73 Aligned_cols=76 Identities=20% Similarity=0.357 Sum_probs=60.6
Q ss_pred ccEEEEcCHHHHHHHHHHhhccccCCCCCeEEcCCCcCCC--------------------------ceEEEEeccc-ccc
Q 044616 2 ADMILVNSKFTANTFANTFKKLHARGIRPAVLYPAVNVDQ--------------------------LNFLSINRFE-RKK 54 (87)
Q Consensus 2 ad~i~vNS~~T~~~i~~~~~~~~~~~~~~~VvYPpvd~~~--------------------------~~~Lsv~r~~-p~K 54 (87)
||.|+++|..+++.....|+.... +..|++.++|.+. +.++++||+. +.|
T Consensus 189 ad~ii~~S~~~~~~~~~~~~~~~~---~i~vi~ngvd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~~~~~~K 265 (439)
T 3fro_A 189 ADIVTTVSRGYLIDEWGFFRNFEG---KITYVFNGIDCSFWNESYLTGSRDERKKSLLSKFGMDEGVTFMFIGRFDRGQK 265 (439)
T ss_dssp CSEEEESCHHHHHHTHHHHGGGTT---SEEECCCCCCTTTSCGGGSCSCHHHHHHHHHHHHTCCSCEEEEEECCSSCTTB
T ss_pred ccEEEecCHHHHHHHhhhhhhcCC---ceeecCCCCCchhcCcccccchhhhhHHHHHHHcCCCCCcEEEEEcccccccc
Confidence 799999999999997776654332 4789999998753 2499999999 999
Q ss_pred CHHHHHHHHHHcchhhhhhhhcCCCCceEEEEC
Q 044616 55 NIDLALSAFAMLQNLEEDVFKNHNTADVTLTIA 87 (87)
Q Consensus 55 n~~lai~Af~~l~~~~~~~~~~~~~~~~~LVia 87 (87)
+++.+++|++.+.++.. ..+++|+|+
T Consensus 266 g~~~li~a~~~l~~~~~-------~~~~~l~i~ 291 (439)
T 3fro_A 266 GVDVLLKAIEILSSKKE-------FQEMRFIII 291 (439)
T ss_dssp CHHHHHHHHHHHHTSGG-------GGGEEEEEE
T ss_pred cHHHHHHHHHHHHhccc-------CCCeEEEEE
Confidence 99999999999987651 136777763
No 6
>2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A*
Probab=98.53 E-value=2.9e-07 Score=66.58 Aligned_cols=64 Identities=17% Similarity=0.199 Sum_probs=54.7
Q ss_pred ccEEEEcCHHHHHHHHHHhhccccCCCCCeEEcCCCcCCC-------------------ceEEEEeccccccCHHHHHHH
Q 044616 2 ADMILVNSKFTANTFANTFKKLHARGIRPAVLYPAVNVDQ-------------------LNFLSINRFERKKNIDLALSA 62 (87)
Q Consensus 2 ad~i~vNS~~T~~~i~~~~~~~~~~~~~~~VvYPpvd~~~-------------------~~~Lsv~r~~p~Kn~~lai~A 62 (87)
||.|++.|.++++.+.+.|+.. . +..|+++++|.+. +.++++||+.++|+++.+++|
T Consensus 157 ad~ii~~s~~~~~~~~~~~~~~-~---~~~vi~ngv~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~~~~~Kg~~~li~a 232 (394)
T 2jjm_A 157 SDVVTAVSHSLINETHELVKPN-K---DIQTVYNFIDERVYFKRDMTQLKKEYGISESEKILIHISNFRKVKRVQDVVQA 232 (394)
T ss_dssp SSEEEESCHHHHHHHHHHTCCS-S---CEEECCCCCCTTTCCCCCCHHHHHHTTCC---CEEEEECCCCGGGTHHHHHHH
T ss_pred CCEEEECCHHHHHHHHHhhCCc-c---cEEEecCCccHHhcCCcchHHHHHHcCCCCCCeEEEEeeccccccCHHHHHHH
Confidence 7999999999999999998752 1 4788999998653 269999999999999999999
Q ss_pred HHHcchh
Q 044616 63 FAMLQNL 69 (87)
Q Consensus 63 f~~l~~~ 69 (87)
++.+.++
T Consensus 233 ~~~l~~~ 239 (394)
T 2jjm_A 233 FAKIVTE 239 (394)
T ss_dssp HHHHHHS
T ss_pred HHHHHhh
Confidence 9998654
No 7
>2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A*
Probab=98.48 E-value=1.9e-07 Score=67.10 Aligned_cols=64 Identities=16% Similarity=0.097 Sum_probs=54.2
Q ss_pred CccEEEEcCHHHHHHHHHHhhccccCCCCCeEEcCCCcCCC--------------ceEEEEecc-ccccCHHHHHHHHHH
Q 044616 1 MADMILVNSKFTANTFANTFKKLHARGIRPAVLYPAVNVDQ--------------LNFLSINRF-ERKKNIDLALSAFAM 65 (87)
Q Consensus 1 ~ad~i~vNS~~T~~~i~~~~~~~~~~~~~~~VvYPpvd~~~--------------~~~Lsv~r~-~p~Kn~~lai~Af~~ 65 (87)
.+|.+++.|.++++.+.+.|+.. +. |+++++|.+. +.++++||+ .++|+++.+++|+..
T Consensus 160 ~~d~ii~~s~~~~~~~~~~~~~~-----~~-vi~~~v~~~~~~~~~~~~~~~~~~~~i~~~G~~~~~~Kg~~~li~a~~~ 233 (406)
T 2gek_A 160 KIIGRIAVSDLARRWQMEALGSD-----AV-EIPNGVDVASFADAPLLDGYPREGRTVLFLGRYDEPRKGMAVLLAALPK 233 (406)
T ss_dssp TCSEEEESSHHHHHHHHHHHSSC-----EE-ECCCCBCHHHHHTCCCCTTCSCSSCEEEEESCTTSGGGCHHHHHHHHHH
T ss_pred hCCEEEECCHHHHHHHHHhcCCC-----cE-EecCCCChhhcCCCchhhhccCCCeEEEEEeeeCccccCHHHHHHHHHH
Confidence 47999999999999999988752 35 8898887542 269999999 999999999999999
Q ss_pred cchhh
Q 044616 66 LQNLE 70 (87)
Q Consensus 66 l~~~~ 70 (87)
+.++.
T Consensus 234 l~~~~ 238 (406)
T 2gek_A 234 LVARF 238 (406)
T ss_dssp HHTTS
T ss_pred HHHHC
Confidence 97664
No 8
>2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A*
Probab=98.46 E-value=2e-07 Score=69.84 Aligned_cols=67 Identities=21% Similarity=0.276 Sum_probs=55.2
Q ss_pred ccEEEEcCHHHHHHHHHH--hh-c----cccCCCCCeEEcCCCcCCC----------------------------ceEEE
Q 044616 2 ADMILVNSKFTANTFANT--FK-K----LHARGIRPAVLYPAVNVDQ----------------------------LNFLS 46 (87)
Q Consensus 2 ad~i~vNS~~T~~~i~~~--~~-~----~~~~~~~~~VvYPpvd~~~----------------------------~~~Ls 46 (87)
||.|+++|+++++.+.+. |+ . ... +..|+++++|.+. +.+++
T Consensus 191 ad~vi~~S~~~~~~~~~~~~~g~~~~~~~~~---ki~vi~ngvd~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~i~~ 267 (499)
T 2r60_A 191 ADKIIVSTSQERFGQYSHDLYRGAVNVEDDD---KFSVIPPGVNTRVFDGEYGDKIKAKITKYLERDLGSERMELPAIIA 267 (499)
T ss_dssp CSEEEESSHHHHHHTTTSGGGTTTCCTTCGG---GEEECCCCBCTTTSSSCCCHHHHHHHHHHHHHHSCGGGTTSCEEEE
T ss_pred CCEEEECCHHHHHHHHhhhcccccccccCCC---CeEEECCCcChhhcCccchhhhHHHHHHHhcccccccCCCCcEEEE
Confidence 799999999999999988 76 2 221 4678999887531 36999
Q ss_pred EeccccccCHHHHHHHHHHcchhhh
Q 044616 47 INRFERKKNIDLALSAFAMLQNLEE 71 (87)
Q Consensus 47 v~r~~p~Kn~~lai~Af~~l~~~~~ 71 (87)
+||+.+.|+++.+++|++.+.++.+
T Consensus 268 vGrl~~~Kg~~~li~a~~~l~~~~~ 292 (499)
T 2r60_A 268 SSRLDQKKNHYGLVEAYVQNKELQD 292 (499)
T ss_dssp CSCCCGGGCHHHHHHHHHTCHHHHH
T ss_pred eecCccccCHHHHHHHHHHHHHhCC
Confidence 9999999999999999999976643
No 9
>2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A
Probab=98.35 E-value=7.4e-07 Score=66.22 Aligned_cols=67 Identities=25% Similarity=0.238 Sum_probs=52.2
Q ss_pred ccEEEEcCHHHHHHHHHH-hhcc-------ccCCCCCeEEcCCCcCCC--------------------------------
Q 044616 2 ADMILVNSKFTANTFANT-FKKL-------HARGIRPAVLYPAVNVDQ-------------------------------- 41 (87)
Q Consensus 2 ad~i~vNS~~T~~~i~~~-~~~~-------~~~~~~~~VvYPpvd~~~-------------------------------- 41 (87)
||.|++.|.++++.+.+. |+.. .....+..|++.++|.+.
T Consensus 205 ad~vi~~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~ngvd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 284 (485)
T 2qzs_A 205 ADHITAVSPTYAREITEPQFAYGMEGLLQQRHREGRLSGVLNGVDEKIWSPETDLLLASRYTRDTLEDKAENKRQLQIAM 284 (485)
T ss_dssp CSEEEESSHHHHHHTTSHHHHTTCHHHHHHHHHTTCEEECCCCCCTTTSCTTTCTTSSSCCCTTCGGGGHHHHHHHHHHH
T ss_pred cCeEEecCHHHHHHHhccccCcchHHHHHhhccCCceEEEecCCCccccCccccccccccccccchhHHHHhHHHHHHHc
Confidence 799999999999999876 5520 000004789999988531
Q ss_pred --------ceEEEEeccccccCHHHHHHHHHHcch
Q 044616 42 --------LNFLSINRFERKKNIDLALSAFAMLQN 68 (87)
Q Consensus 42 --------~~~Lsv~r~~p~Kn~~lai~Af~~l~~ 68 (87)
+.++++||+.++|+++++++|++.+.+
T Consensus 285 ~~~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~ 319 (485)
T 2qzs_A 285 GLKVDDKVPLFAVVSRLTSQKGLDLVLEALPGLLE 319 (485)
T ss_dssp TCCCCTTSCEEEEEEEESGGGCHHHHHHHHHHHHH
T ss_pred CCCCCCCCeEEEEeccCccccCHHHHHHHHHHHhh
Confidence 369999999999999999999998854
No 10
>1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A
Probab=98.34 E-value=4.8e-07 Score=67.27 Aligned_cols=64 Identities=20% Similarity=0.171 Sum_probs=52.0
Q ss_pred ccEEEEcCHHHHHHHHHH-hh--------ccccCCCCCeEEcCCCcCCC-------------------------------
Q 044616 2 ADMILVNSKFTANTFANT-FK--------KLHARGIRPAVLYPAVNVDQ------------------------------- 41 (87)
Q Consensus 2 ad~i~vNS~~T~~~i~~~-~~--------~~~~~~~~~~VvYPpvd~~~------------------------------- 41 (87)
||.|++.|.++++.+.+. |+ .... +..|++.++|.+.
T Consensus 207 ad~vi~~S~~~~~~~~~~~~g~~~~~~~~~~~~---~~~vi~ngvd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ 283 (485)
T 1rzu_A 207 ATALSTVSPSYAEEILTAEFGMGLEGVIGSRAH---VLHGIVNGIDADVWNPATDHLIHDNYSAANLKNRALNKKAVAEH 283 (485)
T ss_dssp CSEEEESCHHHHHHTTSHHHHTTCHHHHHTTGG---GEEECCCCBCTTTSCTTTCTTSSSCCBTTBCTTHHHHHHHHHHH
T ss_pred cCEEEecCHhHHHHHhccccCcchHHHHHhhcC---CceEEcCCCcccccCCcccccccccccccchhhHHHhHHHHHHh
Confidence 799999999999999875 54 1111 4678999988541
Q ss_pred --------ceEEEEeccccccCHHHHHHHHHHcch
Q 044616 42 --------LNFLSINRFERKKNIDLALSAFAMLQN 68 (87)
Q Consensus 42 --------~~~Lsv~r~~p~Kn~~lai~Af~~l~~ 68 (87)
+.++++||+.++|+++++++|+..+.+
T Consensus 284 ~~~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~ 318 (485)
T 1rzu_A 284 FRIDDDGSPLFCVISRLTWQKGIDLMAEAVDEIVS 318 (485)
T ss_dssp HTCCCSSSCEEEEESCBSTTTTHHHHHTTHHHHHH
T ss_pred cCCCCCCCeEEEEEccCccccCHHHHHHHHHHHHh
Confidence 369999999999999999999998854
No 11
>2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A*
Probab=98.33 E-value=6.3e-07 Score=67.44 Aligned_cols=62 Identities=16% Similarity=0.241 Sum_probs=49.3
Q ss_pred EEEEcCHHHHHHHHHH-hhccccCCCCCeEEcCCCcCCC-----------ceEEEEecc-ccccCHHHHHHHHHHcchhh
Q 044616 4 MILVNSKFTANTFANT-FKKLHARGIRPAVLYPAVNVDQ-----------LNFLSINRF-ERKKNIDLALSAFAMLQNLE 70 (87)
Q Consensus 4 ~i~vNS~~T~~~i~~~-~~~~~~~~~~~~VvYPpvd~~~-----------~~~Lsv~r~-~p~Kn~~lai~Af~~l~~~~ 70 (87)
.+++||+++++.+++. |+.. +..+++|++|.+. ..++.+||+ .++|+++++|+||+.+.++.
T Consensus 197 ~vi~~S~~~~~~l~~~g~~~~-----~~~~i~~g~d~~~~~~~~~~~~~~~~il~~gr~~~~~Kg~~~li~A~~~l~~~~ 271 (413)
T 2x0d_A 197 IAVFNSELLKQYFNNKGYNFT-----DEYFFQPKINTTLKNYINDKRQKEKIILVYGRPSVKRNAFTLIVEALKIFVQKY 271 (413)
T ss_dssp EEEEESHHHHHHHHHHTCCCS-----EEEEECCCCCHHHHTTTTSCCCCCSEEEEEECTTCGGGCHHHHHHHHHHHHHHC
T ss_pred EEEEcCHHHHHHHHHcCCCCC-----ceEEeCCCcCchhhcccccccCCCCEEEEEecCchhccCHHHHHHHHHHHHHhC
Confidence 6899999999999986 3311 3578888887531 368999996 69999999999999997654
No 12
>2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A*
Probab=98.23 E-value=7.8e-07 Score=63.18 Aligned_cols=57 Identities=12% Similarity=-0.040 Sum_probs=49.6
Q ss_pred ccEEEEcCHHHHHHHHHHhhccccCCCCCeEEcCCCcCCC-----------ceEEEEeccccccCHHHHHHHHHHc
Q 044616 2 ADMILVNSKFTANTFANTFKKLHARGIRPAVLYPAVNVDQ-----------LNFLSINRFERKKNIDLALSAFAML 66 (87)
Q Consensus 2 ad~i~vNS~~T~~~i~~~~~~~~~~~~~~~VvYPpvd~~~-----------~~~Lsv~r~~p~Kn~~lai~Af~~l 66 (87)
+|.++++|+++++.+.+ +. +..|+++++|.+. +.++++||+.+.|+++.+++|++.+
T Consensus 120 ~d~ii~~S~~~~~~~~~--~~------~~~vi~ngvd~~~~~~~~~~~~~~~~i~~vG~~~~~Kg~~~li~a~~~~ 187 (342)
T 2iuy_A 120 PVGCTYSSRAQRAHCGG--GD------DAPVIPIPVDPARYRSAADQVAKEDFLLFMGRVSPHKGALEAAAFAHAC 187 (342)
T ss_dssp CTTEEESCHHHHHHTTC--CT------TSCBCCCCBCGGGSCCSTTCCCCCSCEEEESCCCGGGTHHHHHHHHHHH
T ss_pred ceEEEEcCHHHHHHHhc--CC------ceEEEcCCCChhhcCcccccCCCCCEEEEEeccccccCHHHHHHHHHhc
Confidence 68999999999999887 21 5789999998653 3799999999999999999999886
No 13
>3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A*
Probab=98.08 E-value=1.2e-05 Score=62.70 Aligned_cols=69 Identities=20% Similarity=0.175 Sum_probs=53.9
Q ss_pred CccEEEEcCHHHHHHHHHHhhccc-----cCCCCCeEEcCCCcCCC----------------------------------
Q 044616 1 MADMILVNSKFTANTFANTFKKLH-----ARGIRPAVLYPAVNVDQ---------------------------------- 41 (87)
Q Consensus 1 ~ad~i~vNS~~T~~~i~~~~~~~~-----~~~~~~~VvYPpvd~~~---------------------------------- 41 (87)
+||.|++-|...++.|.+.|+... .+..+..+|+-+||++.
T Consensus 241 ~ad~v~tVS~~~a~ei~~~~~~g~~l~~~~~~~~i~~I~NGiD~~~~~p~~d~~~~~~~~~~~~~~~K~~~k~~l~~~~g 320 (536)
T 3vue_A 241 EADRVLTVSPYYAEELISGIARGCELDNIMRLTGITGIVNGMDVSEWDPSKDKYITAKYDATTAIEAKALNKEALQAEAG 320 (536)
T ss_dssp HCSEEEESCHHHHHHHHTTCCCCSSSCCCSCCCSCEECCCCCCTTTSCTTTCSSSSCCCCTTTHHHHHHHHHHHHHHHTT
T ss_pred hccEEEEcCHHHhhhhhcccccccccccccccCCeEEEECCcchhhcCCCCccccccccchhhhhhhhHHHHHHHHHhcC
Confidence 389999999999999988774210 01124678888888642
Q ss_pred -------ceEEEEeccccccCHHHHHHHHHHcchh
Q 044616 42 -------LNFLSINRFERKKNIDLALSAFAMLQNL 69 (87)
Q Consensus 42 -------~~~Lsv~r~~p~Kn~~lai~Af~~l~~~ 69 (87)
|.++.|||+.++|+++++|+|+..|.++
T Consensus 321 l~~d~~~p~i~~vgRl~~~Kg~~~li~a~~~l~~~ 355 (536)
T 3vue_A 321 LPVDRKIPLIAFIGRLEEQKGPDVMAAAIPELMQE 355 (536)
T ss_dssp SCCCTTSCEEEEECCBSGGGCHHHHHHHHHHHTTS
T ss_pred CCCCCCCcEEEEEeeccccCChHHHHHHHHHhHhh
Confidence 3699999999999999999999998654
No 14
>3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A*
Probab=98.07 E-value=3.4e-06 Score=69.55 Aligned_cols=77 Identities=14% Similarity=0.210 Sum_probs=55.9
Q ss_pred ccEEEEcCHHHHHHHHHHhhcccc------------------CCCCCeEEcCCCcCCC----------------------
Q 044616 2 ADMILVNSKFTANTFANTFKKLHA------------------RGIRPAVLYPAVNVDQ---------------------- 41 (87)
Q Consensus 2 ad~i~vNS~~T~~~i~~~~~~~~~------------------~~~~~~VvYPpvd~~~---------------------- 41 (87)
||.|+++|...++.+.+.++.... ...+..||+|++|.+.
T Consensus 475 AD~VIa~S~~~~~~l~~~~~~y~~~~~~~~p~Lyr~~~gI~~~~~ki~VIpnGVD~~~F~P~~~~~~Rl~~~~~~i~~~l 554 (816)
T 3s28_A 475 TDFIITSTFQEIAGSKETVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEEKRRLTKFHSEIEELL 554 (816)
T ss_dssp SSEEEESCHHHHHCCSSSCCTTGGGSSEEETTTEEEEESCCTTCTTEEECCCCCCTTTSCCTTCTTTCCGGGHHHHHHHH
T ss_pred CCEEEECCHHHHHHHHHHHHHhhhhhccccchhhhcccccccCCCCEEEECCCcCHHHcCccchhhhhhhhccccccccc
Confidence 899999999999865443221110 0014678999988531
Q ss_pred ------------------ceEEEEeccccccCHHHHHHHHHHcchhhhhhhhcCCCCceEEEEC
Q 044616 42 ------------------LNFLSINRFERKKNIDLALSAFAMLQNLEEDVFKNHNTADVTLTIA 87 (87)
Q Consensus 42 ------------------~~~Lsv~r~~p~Kn~~lai~Af~~l~~~~~~~~~~~~~~~~~LVia 87 (87)
+.++++||+.|.|+++.+|+||..+.+..+ +++|+|+
T Consensus 555 ~~p~~~r~~lg~l~~~~~~vIl~vGRl~~~KGid~LIeA~~~L~~~~~---------~v~LvIv 609 (816)
T 3s28_A 555 YSDVENKEHLCVLKDKKKPILFTMARLDRVKNLSGLVEWYGKNTRLRE---------LANLVVV 609 (816)
T ss_dssp HCSCCBTTEESCBSCTTSCEEEEECCCCTTTTHHHHHHHHHHCHHHHH---------HCEEEEE
T ss_pred cchhhHHHHhcccCCCCCeEEEEEccCcccCCHHHHHHHHHHHHhhCC---------CeEEEEE
Confidence 369999999999999999999999976542 5676663
No 15
>2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A*
Probab=97.96 E-value=4e-06 Score=60.98 Aligned_cols=59 Identities=10% Similarity=0.202 Sum_probs=44.5
Q ss_pred cEEEEcCHHHHHHHHHHhhccccCCCCCeEEcCCCcCCC------------------------ceEEEEeccccccCHHH
Q 044616 3 DMILVNSKFTANTFANTFKKLHARGIRPAVLYPAVNVDQ------------------------LNFLSINRFERKKNIDL 58 (87)
Q Consensus 3 d~i~vNS~~T~~~i~~~~~~~~~~~~~~~VvYPpvd~~~------------------------~~~Lsv~r~~p~Kn~~l 58 (87)
++|+++|++.++. ++. .+..|+++++|... +.++++||+.+.|+++.
T Consensus 178 ~~i~~~s~~~~~~----~~~-----~~~~vi~ngvd~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~vGrl~~~Kg~~~ 248 (416)
T 2x6q_A 178 RYIFHLPEYVQPE----LDR-----NKAVIMPPSIDPLSEKNVELKQTEILRILERFDVDPEKPIITQVSRFDPWKGIFD 248 (416)
T ss_dssp EEEESSGGGSCTT----SCT-----TTEEECCCCBCTTSTTTSCCCHHHHHHHHHHTTCCTTSCEEEEECCCCTTSCHHH
T ss_pred EEEEechHHHHhh----CCc-----cceEEeCCCCChhhhcccccChhhHHHHHHHhCCCCCCcEEEEEeccccccCHHH
Confidence 4455788776652 221 14678999998631 36999999999999999
Q ss_pred HHHHHHHcchhh
Q 044616 59 ALSAFAMLQNLE 70 (87)
Q Consensus 59 ai~Af~~l~~~~ 70 (87)
+++|++.+.++.
T Consensus 249 li~a~~~l~~~~ 260 (416)
T 2x6q_A 249 VIEIYRKVKEKI 260 (416)
T ss_dssp HHHHHHHHHHHC
T ss_pred HHHHHHHHHHhC
Confidence 999999997654
No 16
>3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A
Probab=97.32 E-value=0.00024 Score=50.49 Aligned_cols=65 Identities=14% Similarity=0.108 Sum_probs=48.1
Q ss_pred ccEEEEcCHHHHHHHHHHhhccccCCCCCeEEcCC-CcCC------------------Cc-eEEEEeccccc-cCHHHHH
Q 044616 2 ADMILVNSKFTANTFANTFKKLHARGIRPAVLYPA-VNVD------------------QL-NFLSINRFERK-KNIDLAL 60 (87)
Q Consensus 2 ad~i~vNS~~T~~~i~~~~~~~~~~~~~~~VvYPp-vd~~------------------~~-~~Lsv~r~~p~-Kn~~lai 60 (87)
+|.+++.|+++++.+.+ ++.... +..|++.| +|.. .+ .++++||+++. |+++.++
T Consensus 151 ~d~ii~~s~~~~~~~~~-~g~~~~---~i~vi~n~~~d~~~~~~~~~~~~~~~~~~~~~~~vl~~~gr~~~~~K~~~~li 226 (375)
T 3beo_A 151 ADLHFSPTAKSATNLQK-ENKDES---RIFITGNTAIDALKTTVKETYSHPVLEKLGNNRLVLMTAHRRENLGEPMRNMF 226 (375)
T ss_dssp CSEEEESSHHHHHHHHH-TTCCGG---GEEECCCHHHHHHHHHCCSSCCCHHHHTTTTSEEEEEECCCGGGTTHHHHHHH
T ss_pred hheeeCCCHHHHHHHHH-cCCCcc---cEEEECChhHhhhhhhhhhhhhHHHHHhccCCCeEEEEecccccchhHHHHHH
Confidence 79999999999999987 343211 35677766 4421 12 36789999986 9999999
Q ss_pred HHHHHcchhh
Q 044616 61 SAFAMLQNLE 70 (87)
Q Consensus 61 ~Af~~l~~~~ 70 (87)
+|+..+.++.
T Consensus 227 ~a~~~l~~~~ 236 (375)
T 3beo_A 227 RAIKRLVDKH 236 (375)
T ss_dssp HHHHHHHHHC
T ss_pred HHHHHHHhhC
Confidence 9999886543
No 17
>3nb0_A Glycogen [starch] synthase isoform 2; glycogen synthase, glucose-6-phosphate, yeast, allosteric AC transferase; HET: G6P; 2.41A {Saccharomyces cerevisiae} PDB: 3rt1_A* 3nch_A 3naz_A 3o3c_A* 3rsz_A*
Probab=97.19 E-value=0.002 Score=52.98 Aligned_cols=66 Identities=27% Similarity=0.332 Sum_probs=51.9
Q ss_pred CccEEEEcCHHHHHHHHHHhhccccCCCCCeEEcCCCcCCC-------------------------------------ce
Q 044616 1 MADMILVNSKFTANTFANTFKKLHARGIRPAVLYPAVNVDQ-------------------------------------LN 43 (87)
Q Consensus 1 ~ad~i~vNS~~T~~~i~~~~~~~~~~~~~~~VvYPpvd~~~-------------------------------------~~ 43 (87)
+||.|.+-|.+|++.++.++++.. -.+++=++|++. ++
T Consensus 260 ~AD~ITTVS~~yA~Ei~~Ll~r~~-----d~iIpNGID~~~f~p~~~~~~~k~~aK~klq~~l~~~~~~~l~l~~dk~li 334 (725)
T 3nb0_A 260 SADVFTTVSQITAFEAEHLLKRKP-----DGILPNGLNVIKFQAFHEFQNLHALKKEKINDFVRGHFHGCFDFDLDNTLY 334 (725)
T ss_dssp HSSEEEESSHHHHHHHHHHTSSCC-----SEECCCCBCCCCCSSTTHHHHHHHHHHHHHHHHHHHHTTTCCCSCGGGEEE
T ss_pred hCCEEEECCHHHHHHHHHHhcCCC-----CEEEcCCccccccCcchhhHHHHHHHHHHHHHHHHhhcccCCCCCCCceeE
Confidence 489999999999999999988642 233555555432 25
Q ss_pred EEEEeccc-cccCHHHHHHHHHHcchhhh
Q 044616 44 FLSINRFE-RKKNIDLALSAFAMLQNLEE 71 (87)
Q Consensus 44 ~Lsv~r~~-p~Kn~~lai~Af~~l~~~~~ 71 (87)
+..+||++ +.|.+|+.++|+..|...+.
T Consensus 335 ifivgRle~~nKGiDl~ieAl~~L~~~l~ 363 (725)
T 3nb0_A 335 FFIAGRYEYKNKGADMFIEALARLNYRLK 363 (725)
T ss_dssp EEEESSCCTTTTTHHHHHHHHHHHHHHHH
T ss_pred EEEEEEeccccCCHHHHHHHHHHHHHHHh
Confidence 66789999 78999999999999987764
No 18
>1vgv_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, isomerase; HET: UD1; 2.31A {Escherichia coli} SCOP: c.87.1.3 PDB: 1f6d_A*
Probab=96.99 E-value=0.0015 Score=46.62 Aligned_cols=66 Identities=12% Similarity=0.091 Sum_probs=47.8
Q ss_pred CccEEEEcCHHHHHHHHHHhhccccCCCCCeEEcCCC-c-------------------------C--CCc-eEEEEeccc
Q 044616 1 MADMILVNSKFTANTFANTFKKLHARGIRPAVLYPAV-N-------------------------V--DQL-NFLSINRFE 51 (87)
Q Consensus 1 ~ad~i~vNS~~T~~~i~~~~~~~~~~~~~~~VvYPpv-d-------------------------~--~~~-~~Lsv~r~~ 51 (87)
.+|.+++.|+++++.+.+ ++.... +..|++.|+ | . +.+ .++++||++
T Consensus 141 ~~d~ii~~s~~~~~~l~~-~g~~~~---~i~vi~n~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~~gr~~ 216 (384)
T 1vgv_A 141 LAMYHFSPTETSRQNLLR-ENVADS---RIFITGNTVIDALLWVRDQVMSSDKLRSELAANYPFIDPDKKMILVTGHRRE 216 (384)
T ss_dssp TCSEEEESSHHHHHHHHH-TTCCGG---GEEECCCHHHHHHHHHHHHTTTCHHHHHHHHTTCTTCCTTSEEEEEECCCBS
T ss_pred hccEEEcCcHHHHHHHHH-cCCChh---hEEEeCChHHHHHHhhhhccccchhhhHHHHHhccccCCCCCEEEEEeCCcc
Confidence 389999999999999976 443211 245666552 2 1 112 478999999
Q ss_pred cc-cCHHHHHHHHHHcchhh
Q 044616 52 RK-KNIDLALSAFAMLQNLE 70 (87)
Q Consensus 52 p~-Kn~~lai~Af~~l~~~~ 70 (87)
+. |+++.+++|+..+.++.
T Consensus 217 ~~~kg~~~li~a~~~l~~~~ 236 (384)
T 1vgv_A 217 SFGRGFEEICHALADIATTH 236 (384)
T ss_dssp SCCHHHHHHHHHHHHHHHHC
T ss_pred ccchHHHHHHHHHHHHHhhC
Confidence 87 99999999999986654
No 19
>2hy7_A Glucuronosyltransferase GUMK; glycosyltransferases, xanthan, membrane-associated proteins; 1.90A {Xanthomonas campestris} PDB: 2q6v_A* 3cv3_A* 3cuy_A*
Probab=96.93 E-value=0.00016 Score=53.73 Aligned_cols=47 Identities=11% Similarity=0.041 Sum_probs=38.9
Q ss_pred ccEEEEcCHHHHHHHHHHhhccccCCCCCeEEcCCCcCCC------------ceEEEEeccccccCH
Q 044616 2 ADMILVNSKFTANTFANTFKKLHARGIRPAVLYPAVNVDQ------------LNFLSINRFERKKNI 56 (87)
Q Consensus 2 ad~i~vNS~~T~~~i~~~~~~~~~~~~~~~VvYPpvd~~~------------~~~Lsv~r~~p~Kn~ 56 (87)
||.|++.|++.++.+.+.. +..|++.++|.+. +.++++||+.++|++
T Consensus 179 ad~vi~~S~~~~~~~~~~~--------~i~vipngvd~~~f~~~~~~~~~~~~~i~~vGrl~~~Kg~ 237 (406)
T 2hy7_A 179 LDVIALVSPAMAAEVVSRD--------NVFHVGHGVDHNLDQLGDPSPYAEGIHAVAVGSMLFDPEF 237 (406)
T ss_dssp CSEEEESCGGGGGGCSCST--------TEEECCCCBCTTHHHHHCSCSCCSSEEEEEECCTTBCHHH
T ss_pred CCEEEEcCHHHHHHHHhcC--------CEEEEcCCcChHhcCcccccccCCCcEEEEEeccccccCH
Confidence 7999999999988876543 2678999998642 369999999999999
No 20
>3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori}
Probab=96.86 E-value=0.0012 Score=42.09 Aligned_cols=25 Identities=20% Similarity=0.407 Sum_probs=23.4
Q ss_pred eEEEEeccccccCHHHHHHHHHHcc
Q 044616 43 NFLSINRFERKKNIDLALSAFAMLQ 67 (87)
Q Consensus 43 ~~Lsv~r~~p~Kn~~lai~Af~~l~ 67 (87)
.++++||+.+.|+++.+++|+..+.
T Consensus 4 ~i~~~G~~~~~Kg~~~li~a~~~l~ 28 (166)
T 3qhp_A 4 KIAMVGRYSNEKNQSVLIKAVALSK 28 (166)
T ss_dssp EEEEESCCSTTTTHHHHHHHHHTCT
T ss_pred EEEEEeccchhcCHHHHHHHHHHhc
Confidence 5899999999999999999999984
No 21
>3t5t_A Putative glycosyltransferase; GTB fold, pseudoglycosyltransferase; 1.70A {Streptomyces hygroscopicus} PDB: 4f97_A* 4f96_B* 4f9f_A* 3t7d_A*
Probab=96.81 E-value=0.0019 Score=50.68 Aligned_cols=79 Identities=18% Similarity=0.127 Sum_probs=53.4
Q ss_pred CccEEEEcCHHHHHHHHHHhhccc-c------------CC--CCCeEEcCCCcCCC-------------------ceEEE
Q 044616 1 MADMILVNSKFTANTFANTFKKLH-A------------RG--IRPAVLYPAVNVDQ-------------------LNFLS 46 (87)
Q Consensus 1 ~ad~i~vNS~~T~~~i~~~~~~~~-~------------~~--~~~~VvYPpvd~~~-------------------~~~Ls 46 (87)
.||+|.-.+.--+++|.+.-.+.. . .| ....|++++||++. +.+|+
T Consensus 207 ~~DligF~t~~y~~~Fl~~~~r~l~g~~~~~~~~~v~~~gr~v~v~viP~GID~~~f~~~~~~~~~~lr~~~~~~~lIl~ 286 (496)
T 3t5t_A 207 PATTIGFFADRWCRNFLESVADLLPDARIDREAMTVEWRGHRTRLRTMPLGYSPLTLDGRNPQLPEGIEEWADGHRLVVH 286 (496)
T ss_dssp TSSEEEESSHHHHHHHHHHHHHHCTTCEEETTTTEEEETTEEEEEEECCCCBCGGGC----CCCCTTHHHHHTTSEEEEE
T ss_pred hCCEEEEecHHHHHHHHHHHHHHhcCCcccccCCeEEECCEEEEEEEeccEeCHHHhchhhHHHHHHHHHHhCCceEEEE
Confidence 378888888877777665433221 0 00 12345666788653 26999
Q ss_pred EeccccccCHHHHHHHHHHcchhhhhhhhcCCCCceEEEE
Q 044616 47 INRFERKKNIDLALSAFAMLQNLEEDVFKNHNTADVTLTI 86 (87)
Q Consensus 47 v~r~~p~Kn~~lai~Af~~l~~~~~~~~~~~~~~~~~LVi 86 (87)
|||+.+.|+++..|+|| .+.++.+ ++.++.||+
T Consensus 287 VgRLd~~KGi~~lL~Af-~ll~~~P------~~~~v~Lv~ 319 (496)
T 3t5t_A 287 SGRTDPIKNAERAVRAF-VLAARGG------GLEKTRMLV 319 (496)
T ss_dssp EEESSGGGCHHHHHHHH-HHHHHTS------SCTTEEEEE
T ss_pred cccCccccCHHHHHHHH-HHHHhCc------ccceEEEEE
Confidence 99999999999999999 8876654 222666664
No 22
>2bfw_A GLGA glycogen synthase; glycosyltransferase family 5 UDP/ADP-glucose-glycogen syntha rossman folds, transferase; 1.8A {Pyrococcus abyssi} SCOP: c.87.1.8
Probab=96.45 E-value=0.0038 Score=40.69 Aligned_cols=36 Identities=28% Similarity=0.540 Sum_probs=30.1
Q ss_pred ceEEEEeccc-cccCHHHHHHHHHHcc--hhhhhhhhcCCCCceEEEE
Q 044616 42 LNFLSINRFE-RKKNIDLALSAFAMLQ--NLEEDVFKNHNTADVTLTI 86 (87)
Q Consensus 42 ~~~Lsv~r~~-p~Kn~~lai~Af~~l~--~~~~~~~~~~~~~~~~LVi 86 (87)
+.++++||+. +.|+++.+++|+..+. ++. .+++|+|
T Consensus 37 ~~i~~~G~~~~~~K~~~~li~a~~~l~~~~~~---------~~~~l~i 75 (200)
T 2bfw_A 37 VTFMFIGRFDRGQKGVDVLLKAIEILSSKKEF---------QEMRFII 75 (200)
T ss_dssp EEEEEESCBCSSSSCHHHHHHHHHHHTTSGGG---------GGEEEEE
T ss_pred CEEEEeeccccccCCHHHHHHHHHHHHhhccC---------CCeEEEE
Confidence 3689999999 9999999999999997 444 2567766
No 23
>1uqt_A Alpha, alpha-trehalose-phosphate synthase; glycosyltransferase, transferase; HET: U2F; 2.0A {Escherichia coli} SCOP: c.87.1.6 PDB: 1uqu_A* 2wtx_A* 1gz5_A*
Probab=96.27 E-value=0.0033 Score=48.53 Aligned_cols=39 Identities=18% Similarity=0.292 Sum_probs=31.6
Q ss_pred eEEEEeccccccCHHHHHHHHHHcchhhhhhhhcCCCCceEEEE
Q 044616 43 NFLSINRFERKKNIDLALSAFAMLQNLEEDVFKNHNTADVTLTI 86 (87)
Q Consensus 43 ~~Lsv~r~~p~Kn~~lai~Af~~l~~~~~~~~~~~~~~~~~LVi 86 (87)
.+|+|||+.+.|+++..|+||+.+.++.++ -..+++||+
T Consensus 257 vil~VgRl~~~Kgi~~ll~A~~~ll~~~p~-----~~~~v~Lv~ 295 (482)
T 1uqt_A 257 NIFSVERLDYSKGLPERFLAYEALLEKYPQ-----HHGKIRYTQ 295 (482)
T ss_dssp EEEEECCBCGGGCHHHHHHHHHHHHHHCGG-----GTTTEEEEE
T ss_pred EEEEEeCCcccCCHHHHHHHHHHHHHhCcc-----ccCcEEEEE
Confidence 699999999999999999999999776541 123677775
No 24
>1v4v_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, two domains, homodimer, riken structural genomics/proteomics initiative, RSGI; HET: MSE; 1.80A {Thermus thermophilus} SCOP: c.87.1.3
Probab=96.27 E-value=0.0054 Score=43.71 Aligned_cols=65 Identities=9% Similarity=0.005 Sum_probs=46.5
Q ss_pred ccEEEEcCHHHHHHHHHHhhccccCCCCCeEEcCCC-cC---------------CCc-eEEEEeccccccCHHHHHHHHH
Q 044616 2 ADMILVNSKFTANTFANTFKKLHARGIRPAVLYPAV-NV---------------DQL-NFLSINRFERKKNIDLALSAFA 64 (87)
Q Consensus 2 ad~i~vNS~~T~~~i~~~~~~~~~~~~~~~VvYPpv-d~---------------~~~-~~Lsv~r~~p~Kn~~lai~Af~ 64 (87)
+|.+++.|+.+++.+.+. +.... +..+++.|+ |. +.+ .++++||+++.|+++.+++|++
T Consensus 147 ~~~~~~~s~~~~~~l~~~-g~~~~---ki~vi~n~~~d~~~~~~~~~~~~~~~~~~~~vl~~~gr~~~~k~~~~ll~a~~ 222 (376)
T 1v4v_A 147 TDLDFAPTPLAKANLLKE-GKREE---GILVTGQTGVDAVLLAAKLGRLPEGLPEGPYVTVTMHRRENWPLLSDLAQALK 222 (376)
T ss_dssp CSEEEESSHHHHHHHHTT-TCCGG---GEEECCCHHHHHHHHHHHHCCCCTTCCSSCEEEECCCCGGGGGGHHHHHHHHH
T ss_pred hceeeCCCHHHHHHHHHc-CCCcc---eEEEECCchHHHHhhhhhhhHHHHhcCCCCEEEEEeCcccchHHHHHHHHHHH
Confidence 789999999999998874 43211 245665553 21 012 3568999999999999999999
Q ss_pred Hcchhh
Q 044616 65 MLQNLE 70 (87)
Q Consensus 65 ~l~~~~ 70 (87)
.+.++.
T Consensus 223 ~l~~~~ 228 (376)
T 1v4v_A 223 RVAEAF 228 (376)
T ss_dssp HHHHHC
T ss_pred HHHhhC
Confidence 986543
No 25
>2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8
Probab=96.06 E-value=0.0081 Score=39.09 Aligned_cols=25 Identities=40% Similarity=0.539 Sum_probs=23.8
Q ss_pred ceEEEEeccccccCHHHHHHHHHHc
Q 044616 42 LNFLSINRFERKKNIDLALSAFAML 66 (87)
Q Consensus 42 ~~~Lsv~r~~p~Kn~~lai~Af~~l 66 (87)
+.++++||+.+.|+++.+++|+..+
T Consensus 24 ~~i~~~G~~~~~Kg~~~li~a~~~l 48 (177)
T 2f9f_A 24 DFWLSVNRIYPEKRIELQLEVFKKL 48 (177)
T ss_dssp SCEEEECCSSGGGTHHHHHHHHHHC
T ss_pred CEEEEEeccccccCHHHHHHHHHhC
Confidence 5899999999999999999999988
No 26
>2xci_A KDO-transferase, 3-deoxy-D-manno-2-octulosonic acid transferase; KDTA, GSEA, glycosyltransferase superfamily B,; HET: PG4; 2.00A {Aquifex aeolicus} PDB: 2xcu_A*
Probab=95.71 E-value=0.027 Score=41.28 Aligned_cols=70 Identities=11% Similarity=0.111 Sum_probs=46.6
Q ss_pred CccEEEEcCHHHHHHHHHHhhccccCCCCCeEEcCCC-cCC--------CceEEEEeccccccCHHHHHHHHHHcchhhh
Q 044616 1 MADMILVNSKFTANTFANTFKKLHARGIRPAVLYPAV-NVD--------QLNFLSINRFERKKNIDLALSAFAMLQNLEE 71 (87)
Q Consensus 1 ~ad~i~vNS~~T~~~i~~~~~~~~~~~~~~~VvYPpv-d~~--------~~~~Lsv~r~~p~Kn~~lai~Af~~l~~~~~ 71 (87)
.+|.|++.|+.+++.+.+. +.. +..|++.+. +.. .+.++..++ .+|+++.+++||+.+.++.+
T Consensus 153 ~~d~ii~~S~~~~~~l~~~-g~~-----ki~vi~n~~f~~~~~~~~~l~~~vi~~~~~--~~k~~~~ll~A~~~l~~~~p 224 (374)
T 2xci_A 153 KFDLIIMRTQEDVEKFKTF-GAK-----RVFSCGNLKFICQKGKGIKLKGEFIVAGSI--HTGEVEIILKAFKEIKKTYS 224 (374)
T ss_dssp TCSEEEESCHHHHHHHHTT-TCC-----SEEECCCGGGCCCCCSCCCCSSCEEEEEEE--CGGGHHHHHHHHHHHHTTCT
T ss_pred hCCEEEECCHHHHHHHHHc-CCC-----eEEEcCCCccCCCcChhhhhcCCEEEEEeC--CCchHHHHHHHHHHHHhhCC
Confidence 3799999999999999874 431 234444321 110 134566665 46899999999999976542
Q ss_pred hhhhcCCCCceEEEEC
Q 044616 72 DVFKNHNTADVTLTIA 87 (87)
Q Consensus 72 ~~~~~~~~~~~~LVia 87 (87)
+++|+|+
T Consensus 225 ---------~~~lviv 231 (374)
T 2xci_A 225 ---------SLKLILV 231 (374)
T ss_dssp ---------TCEEEEE
T ss_pred ---------CcEEEEE
Confidence 5677764
No 27
>1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A*
Probab=93.34 E-value=0.028 Score=39.60 Aligned_cols=53 Identities=13% Similarity=0.011 Sum_probs=37.7
Q ss_pred ccEEEEcCHHHHHHHHHHhhccccCCCCCeEEcCCCcCCC----------------c-eEEEEeccccccCHHHHHHHHH
Q 044616 2 ADMILVNSKFTANTFANTFKKLHARGIRPAVLYPAVNVDQ----------------L-NFLSINRFERKKNIDLALSAFA 64 (87)
Q Consensus 2 ad~i~vNS~~T~~~i~~~~~~~~~~~~~~~VvYPpvd~~~----------------~-~~Lsv~r~~p~Kn~~lai~Af~ 64 (87)
+|.+++.|+.+ |+ +..++++|++.+. + .+++.|++.++|+++++++|++
T Consensus 142 ~d~v~~~~~~~-------~~-------~~~~i~n~v~~~~~~~~~~~~~~~~~~~~~~il~~~g~~~~~k~~~~li~a~~ 207 (364)
T 1f0k_A 142 ATKVMQAFPGA-------FP-------NAEVVGNPVRTDVLALPLPQQRLAGREGPVRVLVVGGSQGARILNQTMPQVAA 207 (364)
T ss_dssp CSEEEESSTTS-------SS-------SCEECCCCCCHHHHTSCCHHHHHTTCCSSEEEEEECTTTCCHHHHHHHHHHHH
T ss_pred CCEEEecChhh-------cC-------CceEeCCccchhhcccchhhhhcccCCCCcEEEEEcCchHhHHHHHHHHHHHH
Confidence 67777776543 32 2568888886421 2 3456679999999999999999
Q ss_pred Hcch
Q 044616 65 MLQN 68 (87)
Q Consensus 65 ~l~~ 68 (87)
.+.+
T Consensus 208 ~l~~ 211 (364)
T 1f0k_A 208 KLGD 211 (364)
T ss_dssp HHGG
T ss_pred HhcC
Confidence 8853
No 28
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=92.55 E-value=0.08 Score=39.81 Aligned_cols=34 Identities=12% Similarity=-0.047 Sum_probs=28.3
Q ss_pred eEEEEeccccccCHHHHHHHHHHcchhhhhhhhcCCCCceEEEE
Q 044616 43 NFLSINRFERKKNIDLALSAFAMLQNLEEDVFKNHNTADVTLTI 86 (87)
Q Consensus 43 ~~Lsv~r~~p~Kn~~lai~Af~~l~~~~~~~~~~~~~~~~~LVi 86 (87)
.++.+||+.+ |+++.+|+||..+.++.+ +++|+|
T Consensus 378 ~v~~~g~~~~-K~~~~li~a~~~l~~~~~---------~~~l~i 411 (568)
T 2vsy_A 378 VVLCCFNNSY-KLNPQSMARMLAVLREVP---------DSVLWL 411 (568)
T ss_dssp CEEEECCCGG-GCCHHHHHHHHHHHHHCT---------TCEEEE
T ss_pred EEEEeCCccc-cCCHHHHHHHHHHHHhCC---------CcEEEE
Confidence 5789999999 999999999999976653 557665
No 29
>2c4m_A Glycogen phosphorylase; allosteric control, phosphate dependence, starch degrading, transferase, glycosyltransferase; HET: PLP; 1.9A {Corynebacterium callunae}
Probab=57.19 E-value=16 Score=30.45 Aligned_cols=32 Identities=16% Similarity=0.220 Sum_probs=26.2
Q ss_pred CcCCCceEEEEeccccccCHHH-HHHHHHHcch
Q 044616 37 VNVDQLNFLSINRFERKKNIDL-ALSAFAMLQN 68 (87)
Q Consensus 37 vd~~~~~~Lsv~r~~p~Kn~~l-ai~Af~~l~~ 68 (87)
+|.+.+++.-|.||..||+.+| +++.+..+.+
T Consensus 512 vdpd~l~~~~vkRlheYKRq~Lnil~ii~~~~~ 544 (796)
T 2c4m_A 512 IDPESIFDVQIKRLHEYKRQLMNALYVLDLYFR 544 (796)
T ss_dssp CCTTSEEEEEECCCCGGGTHHHHHHHHHHHHHH
T ss_pred CCCCCcEEEEeecchhhcccCEeHHHHHHHHHH
Confidence 4444468899999999999999 8888887764
No 30
>3dzc_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, in diseases, isomerase, center for structural genomics of INFE diseases, csgid; 2.35A {Vibrio cholerae}
Probab=55.29 E-value=41 Score=24.39 Aligned_cols=66 Identities=8% Similarity=-0.009 Sum_probs=40.4
Q ss_pred CccEEEEcCHHHHHHHHHHhhccccCCCCCeEEcCCC----------------------------cCCCceE-EEEeccc
Q 044616 1 MADMILVNSKFTANTFANTFKKLHARGIRPAVLYPAV----------------------------NVDQLNF-LSINRFE 51 (87)
Q Consensus 1 ~ad~i~vNS~~T~~~i~~~~~~~~~~~~~~~VvYPpv----------------------------d~~~~~~-Lsv~r~~ 51 (87)
+||.+++.|+..++.+.+. |.... +..++.-|+ +.+.+++ ++.+|.+
T Consensus 166 ~a~~~~~~se~~~~~l~~~-G~~~~---ki~vvGn~~~d~~~~~~~~~~~~~~~~~~~r~~lg~l~~~~~~vlv~~hR~~ 241 (396)
T 3dzc_A 166 LTQYHFAPTDTSRANLLQE-NYNAE---NIFVTGNTVIDALLAVREKIHTDMDLQATLESQFPMLDASKKLILVTGHRRE 241 (396)
T ss_dssp TCSEEEESSHHHHHHHHHT-TCCGG---GEEECCCHHHHHHHHHHHHHHHCHHHHHHHHHTCTTCCTTSEEEEEECSCBC
T ss_pred hcCEEECCCHHHHHHHHHc-CCCcC---cEEEECCcHHHHHHHhhhhcccchhhHHHHHHHhCccCCCCCEEEEEECCcc
Confidence 4789999999999998763 43211 122332211 1112444 4565654
Q ss_pred -cccCHHHHHHHHHHcchhh
Q 044616 52 -RKKNIDLALSAFAMLQNLE 70 (87)
Q Consensus 52 -p~Kn~~lai~Af~~l~~~~ 70 (87)
..|+++.+++|+..+.++.
T Consensus 242 ~~~~~~~~ll~A~~~l~~~~ 261 (396)
T 3dzc_A 242 SFGGGFERICQALITTAEQH 261 (396)
T ss_dssp CCTTHHHHHHHHHHHHHHHC
T ss_pred cchhHHHHHHHHHHHHHHhC
Confidence 3477999999999886553
No 31
>1l5w_A Maltodextrin phosphorylase; enzymatic catalysis, substrate complex, trans; HET: GLC PLP; 1.80A {Escherichia coli} SCOP: c.87.1.4 PDB: 1l5v_A* 1l6i_A* 2asv_A* 2av6_A* 2aw3_A* 2azd_A* 1qm5_A* 1e4o_A* 2ecp_A* 1ahp_A*
Probab=54.92 E-value=19 Score=29.94 Aligned_cols=49 Identities=16% Similarity=0.284 Sum_probs=32.6
Q ss_pred CcCCCceEEEEeccccccCHHH-HHHHHHHcchhhhhhhhcCCCCceEEEEC
Q 044616 37 VNVDQLNFLSINRFERKKNIDL-ALSAFAMLQNLEEDVFKNHNTADVTLTIA 87 (87)
Q Consensus 37 vd~~~~~~Lsv~r~~p~Kn~~l-ai~Af~~l~~~~~~~~~~~~~~~~~LVia 87 (87)
+|.+.+++.-|.||..||+.+| +++.+..+.+-... .+.++..+.+|++
T Consensus 522 vdpd~l~~~~vkRl~eYKRq~Lnil~ii~~~~~i~~~--~~~~~~p~q~If~ 571 (796)
T 1l5w_A 522 INPQAIFDIQIKRLHEYKRQHLNLLHILALYKEIREN--PQADRVPRVFLFG 571 (796)
T ss_dssp CCTTSEEEEEESCCCGGGTHHHHHHHHHHHHHHHHTC--TTCCCCCEEEEEE
T ss_pred cCCCcceEeeeecchhhcccCEeHHHHHHHHHHHhcC--CCCCCCCeEEEEE
Confidence 3444468899999999999999 88888877643220 0112345666653
No 32
>2gj4_A Glycogen phosphorylase, muscle form; transferase; HET: PLR 2TH; 1.60A {Oryctolagus cuniculus} SCOP: c.87.1.4 PDB: 2gm9_A* 1abb_A* 3nc4_A* 3l79_A* 2pyd_A* 2pyi_A* 3l7a_A* 3l7b_A* 3l7c_A* 3l7d_A* 2qnb_A* 1c8l_A* 1axr_A* 1gpy_A* 1e1y_A* 1lwo_A* 1pyg_A* 1uzu_A* 1lwn_A* 1xkx_A* ...
Probab=39.37 E-value=50 Score=27.60 Aligned_cols=31 Identities=19% Similarity=0.265 Sum_probs=25.4
Q ss_pred CcCCCceEEEEeccccccCHHHH-HHHHHHcc
Q 044616 37 VNVDQLNFLSINRFERKKNIDLA-LSAFAMLQ 67 (87)
Q Consensus 37 vd~~~~~~Lsv~r~~p~Kn~~la-i~Af~~l~ 67 (87)
+|.+.+++.-|.||..||+.+|. ++.+..+.
T Consensus 546 vdpd~l~~g~vkRl~eYKRq~L~~l~~i~~~~ 577 (824)
T 2gj4_A 546 INPNSLFDVQVKRIHEYKRQLLNCLHVITLYN 577 (824)
T ss_dssp CCTTSEEEEEESCCCGGGTHHHHHHHHHHHHH
T ss_pred cCCCcceEeeeecchhhcchhhHHHHHHHHHH
Confidence 44444688999999999999997 88888775
No 33
>2ot8_C HnRNP M, heterogeneous nuclear ribonucleoprotein M; heat repeat, nuclear import complex, karyopherin, transport protein; 3.10A {Homo sapiens}
Probab=29.86 E-value=14 Score=18.39 Aligned_cols=11 Identities=45% Similarity=0.389 Sum_probs=7.7
Q ss_pred EEeccccccCH
Q 044616 46 SINRFERKKNI 56 (87)
Q Consensus 46 sv~r~~p~Kn~ 56 (87)
.=||||||-|.
T Consensus 17 ggnrfepY~Np 27 (30)
T 2ot8_C 17 GGNRFEPYANP 27 (30)
T ss_pred CCcccccccCc
Confidence 34789988653
No 34
>2o6l_A UDP-glucuronosyltransferase 2B7; drug metabolism, rossman, MAD, enzyme, nucleotide binding, sugar,UDP-glucuronosyltransferase, UGT; 1.80A {Homo sapiens}
Probab=23.60 E-value=25 Score=21.81 Aligned_cols=25 Identities=16% Similarity=0.256 Sum_probs=21.2
Q ss_pred eEEEEeccc---cccCHHHHHHHHHHcc
Q 044616 43 NFLSINRFE---RKKNIDLALSAFAMLQ 67 (87)
Q Consensus 43 ~~Lsv~r~~---p~Kn~~lai~Af~~l~ 67 (87)
.|+++|+.. +.|.++.+++|+..+.
T Consensus 24 vlv~~Gs~~~~~~~~~~~~~~~al~~~~ 51 (170)
T 2o6l_A 24 VVFSLGSMVSNMTEERANVIASALAQIP 51 (170)
T ss_dssp EEEECCSCCTTCCHHHHHHHHHHHTTSS
T ss_pred EEEECCCCcccCCHHHHHHHHHHHHhCC
Confidence 589999985 8899999999997654
Done!