BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 044617
(265 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9SU92|PPSP3_ARATH Inorganic pyrophosphatase 3 OS=Arabidopsis thaliana GN=At4g29530
PE=2 SV=1
Length = 245
Score = 359 bits (922), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 166/244 (68%), Positives = 199/244 (81%), Gaps = 2/244 (0%)
Query: 1 MADVVVVFDFDRTLIDDDSDNWVVTQMGLTHLFNQLRSTLPWNSLMDRMMKELHSQGKTV 60
MA +V++FDFDRTLID DSDNWVVT+MGLT +F+QLR TLPWN LMDRMM EL SQG+++
Sbjct: 1 MAKIVILFDFDRTLIDGDSDNWVVTEMGLTEIFHQLRFTLPWNRLMDRMMMELQSQGRSI 60
Query: 61 EDIANCLRQCPLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTN 120
+DI +CL++ P+DSH+ AIKSA S GCDLKIVSDANQF+IE I+EHH L+ CFSEIYTN
Sbjct: 61 DDIKSCLKKMPIDSHIIEAIKSAKSSGCDLKIVSDANQFFIEKILEHHDLVDCFSEIYTN 120
Query: 121 PTYVDEQGRLRILPYHDSTLSHHGCNLCPSNLCKGFVLDHVCTSFGCGK--QRFIYLGDG 178
PT +D+ G LRILPYH L H CNLCPSNLCKG V+DH+ S + +RFIYLGDG
Sbjct: 121 PTSLDDNGNLRILPYHSDALPPHSCNLCPSNLCKGLVMDHLRASSSNDQIPRRFIYLGDG 180
Query: 179 RGDFCPTLKLRDCDFVMPRKNYPLWDRICSNPMLIKAKVHEWSSAEELKKILLHLIGAIS 238
GDFCPTLKLR+CDFVMPR NYPLW +I NP+LIKA+V EWSSAEE ++ILL L+ I+
Sbjct: 181 GGDFCPTLKLRECDFVMPRTNYPLWKKISDNPLLIKAEVKEWSSAEEQQRILLQLVSTIT 240
Query: 239 IKED 242
+ED
Sbjct: 241 KEED 244
>sp|Q9FZ62|PPSP2_ARATH Inorganic pyrophosphatase 2 OS=Arabidopsis thaliana GN=At1g17710
PE=2 SV=1
Length = 279
Score = 302 bits (773), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 138/242 (57%), Positives = 181/242 (74%), Gaps = 2/242 (0%)
Query: 3 DVVVVFDFDRTLIDDDSDNWVVTQMGLTHLFNQLRSTLPWNSLMDRMMKELHSQGKTVED 62
++V+VFDFD+T+ID DSDNWVV ++G T LFNQL T+PWNSLM+RMMKELH GKT+E+
Sbjct: 6 NIVIVFDFDKTIIDVDSDNWVVDELGFTDLFNQLLPTMPWNSLMNRMMKELHDHGKTIEE 65
Query: 63 IANCLRQCPLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTNPT 122
I LR+ P+ V AIKSAH+LGC+L+IVSDAN +IETI+EH G+ FSEI TNP
Sbjct: 66 IKQVLRRIPIHPRVIPAIKSAHALGCELRIVSDANTLFIETIIEHLGIGEFFSEINTNPG 125
Query: 123 YVDEQGRLRILPYHDSTLSHHGCNLCPSNLCKGFVLDHVCTSFGC-GK-QRFIYLGDGRG 180
VDEQGRL + PYHD T S HGC+ CP N+CKG ++D + S GK + IYLGDG G
Sbjct: 126 LVDEQGRLIVSPYHDFTKSSHGCSRCPPNMCKGLIIDRIQASLTKEGKTSKMIYLGDGAG 185
Query: 181 DFCPTLKLRDCDFVMPRKNYPLWDRICSNPMLIKAKVHEWSSAEELKKILLHLIGAISIK 240
D+CP+L L+ D++MPRKN+P+WD I NPML+KA V +W+ E++++IL+ +I I
Sbjct: 186 DYCPSLGLKAEDYMMPRKNFPVWDLISQNPMLVKATVRDWTDGEDMERILMEIINEIMSS 245
Query: 241 ED 242
E+
Sbjct: 246 EE 247
>sp|Q67YC0|PPSP1_ARATH Inorganic pyrophosphatase 1 OS=Arabidopsis thaliana GN=PS2 PE=1
SV=1
Length = 295
Score = 300 bits (768), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 144/263 (54%), Positives = 192/263 (73%), Gaps = 5/263 (1%)
Query: 4 VVVVFDFDRTLIDDDSDNWVVTQMGLTHLFNQLRSTLPWNSLMDRMMKELHSQGKTVEDI 63
+VVVFDFD+T+ID DSDNWV+ ++G T LFNQL T+PWN+LMDRMMKELH QGKT+E+I
Sbjct: 14 IVVVFDFDKTIIDVDSDNWVIDELGFTDLFNQLLPTMPWNTLMDRMMKELHDQGKTIEEI 73
Query: 64 ANCLRQCPLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTNPTY 123
LR P+ V AIKSAH LGC+L+IVSDAN F+IETI+EH G+ FSEI +NP Y
Sbjct: 74 KQVLRTIPIHPRVVPAIKSAHDLGCELRIVSDANMFFIETIVEHLGISELFSEINSNPGY 133
Query: 124 VDEQGRLRILPYHDSTLSHHGCN--LCPSNLCKGFVLDHVCTSFGC-GKQRFIYLGDGRG 180
VDE+G L+I PYHD T S H C+ CP N+CKG +++ + S GK++ IYLGDG G
Sbjct: 134 VDERGTLKISPYHDFTKSPHSCSCGTCPPNMCKGLIIERIQQSLAKEGKKKMIYLGDGAG 193
Query: 181 DFCPTLKLRDCDFVMPRKNYPLWDRICSNPMLIKAKVHEWSSAEELKKILLHLIGAISIK 240
D+CP+LKL D+VMPRKN+P+WD I NPMLIKA + EW+ + ++ IL+ I I ++
Sbjct: 194 DYCPSLKLNTEDYVMPRKNFPVWDLISQNPMLIKAAIREWTDGQSMEMILIGTIEEIRLE 253
Query: 241 EDVDSTVSSQPNSSECRSQTMPV 263
E+ + ++S N+ C+ QT+ +
Sbjct: 254 EEKEKMLTSAENN--CKMQTISI 274
>sp|Q6DBV4|PHOP1_DANRE Probable phosphatase phospho1 OS=Danio rerio GN=phospho1 PE=2 SV=1
Length = 279
Score = 124 bits (311), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 81/245 (33%), Positives = 122/245 (49%), Gaps = 24/245 (9%)
Query: 5 VVVFDFDRTLIDDDSDNWVVTQMGLTHLFNQLRSTLP---WNSLMDRMMKELHSQGKTVE 61
++ FDFD TL+D+ SD+ +V+ L L+ T +N M R++ L QG T
Sbjct: 37 LMFFDFDETLVDECSDDSMVSAAPGGVLPGWLKDTYRPGRYNEYMQRVLAYLSEQGVTPA 96
Query: 62 DIANCLRQCPLDSHVAAAIK---SAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIY 118
I + + P + A + S S ++ VSDAN +IET ++H G F I+
Sbjct: 97 AIRATVEKLPPCPGIPALMHFLLSQPSRDFEVVCVSDANTVFIETWLQHMGFQPLFLRIF 156
Query: 119 TNPTYVDEQGRLRILPYHDSTLSHHGCNLCPSNLCKG-----FVLDHVCTSFGCGKQRFI 173
TNP + D+ G L++ P+H H C CP+N+CK +V + G Q+ +
Sbjct: 157 TNPAHFDDNGVLQLRPFHS-----HECLRCPANMCKAVVVRQYVAQRIRERGGRPYQKVL 211
Query: 174 YLGDGRGDFCPTLKLRDCDFVMPRKNYPLWDRIC----SNPMLIKAKVHEWSSAEE---- 225
Y+GDG DFCP+L L D PR+++P+ I + P KA V W S E+
Sbjct: 212 YMGDGANDFCPSLTLSPGDVAFPRRDFPMHKLIQEMGEAKPGEFKASVVPWKSGEDVVNT 271
Query: 226 LKKIL 230
L+KIL
Sbjct: 272 LRKIL 276
>sp|Q66KD6|PHOP2_XENTR Probable phosphatase phospho2 OS=Xenopus tropicalis GN=phospho2
PE=2 SV=1
Length = 238
Score = 122 bits (305), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 77/240 (32%), Positives = 115/240 (47%), Gaps = 22/240 (9%)
Query: 5 VVVFDFDRTLIDDDSDNWVVTQMGLTHLFNQLRSTL---PWNSLMDRMMKELHSQGKTVE 61
++VFDFD T+I+D+SD W+V + L N L+++ W M R+ L QG E
Sbjct: 4 LLVFDFDHTIINDNSDTWIVQCVPGKKLPNGLQNSYEKGKWTEYMGRVFSYLGEQGIREE 63
Query: 62 DIANCLRQCPLDSHVAAAIKSAHSLG-----CDLKIVSDANQFYIETIMEHHGLLGCFSE 116
D+ + P + H +G D I+SD+N +I+ I+ H + F +
Sbjct: 64 DMKRIMIAIP---YTPGMTDLLHFIGQNKDSFDCIIISDSNTIFIDWILTHANVHNVFDK 120
Query: 117 IYTNPTYVDEQGRLRILPYHDSTLSHHGCNLCPSNLCKGFVLDHVC---TSFGCGKQRFI 173
++TNP D G L + +H HH C CP+NLCK VL+ +S + +
Sbjct: 121 VFTNPAAFDSVGNLTVQNFH----VHH-CTTCPTNLCKKKVLEEFVAKQSSNSAHYSKIV 175
Query: 174 YLGDGRGDFCPTLKLRDCDFVMPRKNYPLWDRICSNPMLIKAKVHEWSSAEELKKILLHL 233
Y+GDG D CP L+ D MPR Y L I + L+ + + WS+ E IL HL
Sbjct: 176 YVGDGGNDLCPVTFLKKGDIAMPRAGYTLDKHIAKDVTLVDSTISVWSTGAE---ILSHL 232
>sp|Q9D9M5|PHOP2_MOUSE Pyridoxal phosphate phosphatase PHOSPHO2 OS=Mus musculus
GN=Phospho2 PE=2 SV=1
Length = 241
Score = 119 bits (299), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 75/242 (30%), Positives = 112/242 (46%), Gaps = 16/242 (6%)
Query: 4 VVVVFDFDRTLIDDDSDNWVVTQMGLTHLFNQLRSTLP---WNSLMDRMMKELHSQGKTV 60
V++VFDFD T+IDD+SD W+V L +L+ + W M R+ K L +G
Sbjct: 3 VLLVFDFDNTIIDDNSDTWIVQCAPDKKLPIELQDSYQKGLWTEFMGRVFKYLRDEGVKA 62
Query: 61 EDIANCLRQCPLDSHVAAAIK--SAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIY 118
+++ + P S + + + D I+SD+N +I+ ++E F ++
Sbjct: 63 DELKRAVTSLPFTSGMIELLSFLRMNKDRFDCIIISDSNSIFIDWVLEAAAFHDVFDHVF 122
Query: 119 TNPTYVDEQGRLRILPYHDSTLSHHGCNLCPSNLCKGFVLDHVC---TSFGCGKQRFIYL 175
TNP D GRL + YH H C CP NLCK VL G R +Y+
Sbjct: 123 TNPASFDSSGRLTVKNYH-----AHSCTRCPKNLCKNTVLGEFIDKQLQKGVRYTRIVYI 177
Query: 176 GDGRGDFCPTLKLRDCDFVMPRKNYPL---WDRICSNPMLIKAKVHEWSSAEELKKILLH 232
GDG D CP L+ D MPR+ Y L ++ N +++ + WSS E+ L
Sbjct: 178 GDGGNDVCPVTFLKKNDVAMPREGYTLHRTLAKMSQNLEPMESSIVVWSSGVEIISHLQF 237
Query: 233 LI 234
LI
Sbjct: 238 LI 239
>sp|Q66HC4|PHOP2_RAT Pyridoxal phosphate phosphatase PHOSPHO2 OS=Rattus norvegicus
GN=Phospho2 PE=2 SV=1
Length = 241
Score = 118 bits (295), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 75/242 (30%), Positives = 111/242 (45%), Gaps = 16/242 (6%)
Query: 4 VVVVFDFDRTLIDDDSDNWVVTQMGLTHLFNQLRSTLP---WNSLMDRMMKELHSQGKTV 60
V++VFDFD T+IDD+SD W++ L +L+ + W M R+ K L +G
Sbjct: 3 VLLVFDFDNTIIDDNSDTWIIQCAPDKKLPIELQDSYQKGLWTEFMGRVFKYLRDEGVKE 62
Query: 61 EDIANCLRQCPLDSHVAAAIK--SAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIY 118
E++ + P S + + + D I+SD+N +I+ ++E F ++
Sbjct: 63 EELKRAVTSLPFTSGMIELLSFLRMNKDRFDCIIISDSNSIFIDWVLEAAAFHDVFDTVF 122
Query: 119 TNPTYVDEQGRLRILPYHDSTLSHHGCNLCPSNLCKGFVLDHVC---TSFGCGKQRFIYL 175
TNP D GRL + H H C CP NLCK VL G R +Y+
Sbjct: 123 TNPASFDSTGRLTVRNCH-----THACTRCPKNLCKNTVLGEFIDKQLQKGVRYTRIVYI 177
Query: 176 GDGRGDFCPTLKLRDCDFVMPRKNYPL---WDRICSNPMLIKAKVHEWSSAEELKKILLH 232
GDG D CP L+ D MPR+ Y L D++ N + + + WSS E+ L
Sbjct: 178 GDGGNDVCPVTFLKKNDVAMPREGYTLHRTLDKMSQNLEPMASSIVVWSSGMEIISHLQF 237
Query: 233 LI 234
LI
Sbjct: 238 LI 239
>sp|Q8R2H9|PHOP1_MOUSE Phosphoethanolamine/phosphocholine phosphatase OS=Mus musculus
GN=Phospho1 PE=2 SV=1
Length = 267
Score = 117 bits (292), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 72/242 (29%), Positives = 115/242 (47%), Gaps = 17/242 (7%)
Query: 5 VVVFDFDRTLIDDDSDNWVVTQMGLTHLFNQLRSTLP---WNSLMDRMMKELHSQGKTVE 61
++ FDFD T++D++SD+ +V L LR+T +N M R+ K L QG
Sbjct: 28 LLTFDFDETIVDENSDDSIVRAAPGQQLPESLRATYREGYYNEYMQRVFKYLGEQGVRPR 87
Query: 62 DIANCLRQCPLDSHVAAAIKSAHSLGC--DLKIVSDANQFYIETIMEHHGLLGCFSEIYT 119
D+ PL + ++ G ++ ++SDAN F +E+ + G F I +
Sbjct: 88 DLRAVYETIPLSPGMGDLLQFIAKQGSCFEVILISDANTFGVESALRAAGHHSLFRRILS 147
Query: 120 NPTYVDEQGRLRILPYHDSTLSHHGCNLCPSNLCKGFVLDHVCTSF---GCGKQRFIYLG 176
NP+ D +G L + P+H H C+ CP+N+CK VL G +R Y+G
Sbjct: 148 NPSGPDARGLLTLRPFHT-----HSCSRCPANMCKHKVLSEYLRERARDGVHFERLFYVG 202
Query: 177 DGRGDFCPTLKLRDCDFVMPRKNYPLWDRIC----SNPMLIKAKVHEWSSAEELKKILLH 232
DG DFCP L D PR+ YP+ I + P +A V W +A ++++ L
Sbjct: 203 DGANDFCPMGLLAGGDVAFPRRGYPMHRLIQEAQKAEPSSFRAHVVPWETAADVRQHLQQ 262
Query: 233 LI 234
++
Sbjct: 263 VL 264
>sp|Q8TCT1|PHOP1_HUMAN Phosphoethanolamine/phosphocholine phosphatase OS=Homo sapiens
GN=PHOSPHO1 PE=1 SV=1
Length = 267
Score = 116 bits (290), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 74/241 (30%), Positives = 115/241 (47%), Gaps = 20/241 (8%)
Query: 5 VVVFDFDRTLIDDDSDNWVVTQMGLTHLFNQLRSTLP---WNSLMDRMMKELHSQGKTVE 61
++ FDFD T++D++SD+ +V L LR+T +N M R+ K L QG
Sbjct: 28 LLTFDFDETIVDENSDDSIVRAAPGQRLPESLRATYREGFYNEYMQRVFKYLGEQGVRPR 87
Query: 62 DIANCLRQCPLDSHVAAAIKSAHSLGC--DLKIVSDANQFYIETIMEHHGLLGCFSEIYT 119
D++ PL ++ ++ G ++ ++SDAN F +E+ + G F I +
Sbjct: 88 DLSAIYEAIPLSPGMSDLLQFVAKQGACFEVILISDANTFGVESSLRAAGHHSLFRRILS 147
Query: 120 NPTYVDEQGRLRILPYHDSTLSHHGCNLCPSNLCKGFVLDHVCTSF---GCGKQRFIYLG 176
NP+ D +G L + P+H H C CP+N+CK VL G +R Y+G
Sbjct: 148 NPSGPDARGLLALRPFHT-----HSCARCPANMCKHKVLSDYLRERAHDGVHFERLFYVG 202
Query: 177 DGRGDFCPTLKLRDCDFVMPRKNYPLWDRIC----SNPMLIKAKVHEWSSAEELKKILLH 232
DG DFCP L D PR+ YP+ I + P +A V W +A +++ LH
Sbjct: 203 DGANDFCPMGLLAGGDVAFPRRGYPMHRLIQEAQKAEPSSFRASVVPWETAADVR---LH 259
Query: 233 L 233
L
Sbjct: 260 L 260
>sp|O73884|PHOP1_CHICK Phosphoethanolamine/phosphocholine phosphatase OS=Gallus gallus
GN=PHOSPHO1 PE=2 SV=1
Length = 268
Score = 115 bits (289), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 72/243 (29%), Positives = 113/243 (46%), Gaps = 19/243 (7%)
Query: 5 VVVFDFDRTLIDDDSDNWVVTQMGLTHLFNQLRSTLP---WNSLMDRMMKELHSQGKTVE 61
++VFDFD T+I++ SD+ +V L +R + +N M R++ + QG +
Sbjct: 28 LLVFDFDGTIINESSDDSIVRAAPGQALPEHIRQSFREGFYNEYMQRVLAYMGDQGVKMG 87
Query: 62 DIANCLRQCPLDSHVA---AAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIY 118
D PL + + H L ++ ++SDAN F IE + G F +I+
Sbjct: 88 DFKAVYENIPLSPGMPDLFQFLSKNHEL-FEIILISDANMFGIECKLRAAGFYSLFRKIF 146
Query: 119 TNPTYVDEQGRLRILPYHDSTLSHHGCNLCPSNLCKGFVLDHVCTSFGCGK---QRFIYL 175
+NP+ D++G + PYH H C CP+N CK +L + +R Y+
Sbjct: 147 SNPSSFDKRGYFTLGPYHS-----HKCLDCPANTCKRKILTEYLAERAQEEVEFERVFYV 201
Query: 176 GDGRGDFCPTLKLRDCDFVMPRKNYPL----WDRICSNPMLIKAKVHEWSSAEELKKILL 231
GDG DFCP++ L D PRK YP+ + P +A V W SA E+ + L
Sbjct: 202 GDGANDFCPSVTLTSADVAFPRKGYPMHQMTQEMEKKQPGTFQATVVPWESATEVARYLQ 261
Query: 232 HLI 234
L+
Sbjct: 262 ELL 264
>sp|Q8TCD6|PHOP2_HUMAN Pyridoxal phosphate phosphatase PHOSPHO2 OS=Homo sapiens
GN=PHOSPHO2 PE=1 SV=1
Length = 241
Score = 114 bits (286), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 75/244 (30%), Positives = 111/244 (45%), Gaps = 20/244 (8%)
Query: 4 VVVVFDFDRTLIDDDSDNWVVTQMGLTHLFNQLRSTLP---WNSLMDRMMKELHSQGKTV 60
+++VFDFD T+IDD+SD W+V L +LR + W M R+ K L +G
Sbjct: 3 ILLVFDFDNTIIDDNSDTWIVQCAPNKKLPIELRDSYRKGFWTEFMGRVFKYLGDKGVRE 62
Query: 61 EDIANCLRQCPLDSHVAAAI----KSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSE 116
++ + P + K+ C I+SD+N +I+ ++E F +
Sbjct: 63 HEMKRAVTSLPFTPGMVELFNFIRKNKDKFDC--IIISDSNSVFIDWVLEAASFHDIFDK 120
Query: 117 IYTNPTYVDEQGRLRILPYHDSTLSHHGCNLCPSNLCKGFVLDHVC---TSFGCGKQRFI 173
++TNP + G L + YH H CN CP NLCK VL G + +
Sbjct: 121 VFTNPAAFNSNGHLTVENYHT-----HSCNRCPKNLCKKVVLIEFVDKQLQQGVNYTQIV 175
Query: 174 YLGDGRGDFCPTLKLRDCDFVMPRKNYPL---WDRICSNPMLIKAKVHEWSSAEELKKIL 230
Y+GDG D CP L++ D MPRK Y L R+ N ++ V WSS ++ L
Sbjct: 176 YIGDGGNDVCPVTFLKNDDVAMPRKGYTLQKTLSRMSQNLEPMEYSVVVWSSGVDIISHL 235
Query: 231 LHLI 234
LI
Sbjct: 236 QFLI 239
>sp|Q2KI06|PHOP2_BOVIN Pyridoxal phosphate phosphatase PHOSPHO2 OS=Bos taurus GN=PHOSPHO2
PE=2 SV=1
Length = 241
Score = 113 bits (282), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 70/223 (31%), Positives = 104/223 (46%), Gaps = 22/223 (9%)
Query: 4 VVVVFDFDRTLIDDDSDNWVVTQMGLTHLFNQLRSTLP---WNSLMDRMMKELHSQGKTV 60
+++VFDFD T+IDD+SD W+V L +L+ + W M R+ K L +G
Sbjct: 3 ILLVFDFDNTIIDDNSDTWIVQCAPEKKLPLELKDSYKKGFWTEFMGRVFKYLGDEGVRE 62
Query: 61 EDIANCLRQCPLDSHVAAAI----KSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSE 116
+++ + P + + K+ + C I+SD+N +I+ ++E F +
Sbjct: 63 DEMKRAMISMPFTPGMVELLNFIRKNKNKFDC--IIISDSNSVFIDWVLEATNFHDVFDK 120
Query: 117 IYTNPTYVDEQGRLRILPYHDSTLSHHGCNLCPSNLCKGFVLDHVC---TSFGCGKQRFI 173
++TNP D G L + +H H C CP NLCK VL G R +
Sbjct: 121 VFTNPAAFDSNGHLTVEKHHT-----HSCTRCPQNLCKNVVLVEFVGEQLQQGVNYTRIV 175
Query: 174 YLGDGRGDFCPTLKLRDCDFVMPRKNYPLWD---RICSN--PM 211
Y+GDG D CP L+ D MPRK Y L R+C N PM
Sbjct: 176 YIGDGGNDVCPVTFLKKNDIAMPRKGYALQKTLYRMCQNLEPM 218
>sp|P75672|YAFS_ECOLI Uncharacterized protein YafS OS=Escherichia coli (strain K12)
GN=yafS PE=4 SV=2
Length = 240
Score = 32.3 bits (72), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 27/52 (51%), Gaps = 10/52 (19%)
Query: 9 DFDRTLIDDDSDNWVVTQ-------MGLTHLFNQLRSTLPWNSLMDRMMKEL 53
+ DR LIDD W+V MGL L LR T P+NS M +M++L
Sbjct: 112 EADRVLIDD---GWLVISGFNPISFMGLRKLVPVLRKTSPYNSRMFTLMRQL 160
>sp|Q54X95|SYMC_DICDI Probable methionine--tRNA ligase, cytoplasmic OS=Dictyostelium
discoideum GN=metS PE=3 SV=1
Length = 736
Score = 32.3 bits (72), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 57/157 (36%), Gaps = 13/157 (8%)
Query: 65 NCLRQCPLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGL-LGCFSEIYTNPTY 123
NC+ C D + A A S GC K + D + I E + F TN
Sbjct: 56 NCIYICGTDEYGTATETKALSEGCTPKEICDKYHEIHKEIYEWFNISFDKFGRTSTNSQT 115
Query: 124 VDEQGRLRILPYHDSTLSHHGCNLCPSNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFC 183
Q + + TL+ L CK F+ D C +F D RGD C
Sbjct: 116 EIAQDIFNKIKDNGYTLTQEIEQLYCEQTCKMFLADRFVEG-TCPHCKF---EDARGDQC 171
Query: 184 P--TLKLRDCDFVMPRKNYPLWDRICSNPMLIKAKVH 218
+ L + + PR ++CS P +IK+ H
Sbjct: 172 DGCSKLLNPTELINPRC------KVCSKPPVIKSTKH 202
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.323 0.137 0.437
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 103,119,429
Number of Sequences: 539616
Number of extensions: 4332338
Number of successful extensions: 8502
Number of sequences better than 100.0: 18
Number of HSP's better than 100.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 8456
Number of HSP's gapped (non-prelim): 18
length of query: 265
length of database: 191,569,459
effective HSP length: 115
effective length of query: 150
effective length of database: 129,513,619
effective search space: 19427042850
effective search space used: 19427042850
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 60 (27.7 bits)