Query 044617
Match_columns 265
No_of_seqs 192 out of 2662
Neff 9.6
Searched_HMMs 46136
Date Fri Mar 29 05:03:37 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/044617.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/044617hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG3120 Predicted haloacid deh 100.0 9.4E-36 2E-40 230.9 21.9 237 2-242 12-255 (256)
2 PF06888 Put_Phosphatase: Puta 100.0 3.4E-35 7.4E-40 237.8 24.8 225 5-234 2-234 (234)
3 COG0546 Gph Predicted phosphat 99.9 6E-25 1.3E-29 179.5 14.5 201 1-232 2-219 (220)
4 TIGR01489 DKMTPPase-SF 2,3-dik 99.9 9.9E-24 2.1E-28 168.1 20.4 183 4-197 2-187 (188)
5 PRK13288 pyrophosphatase PpaX; 99.9 1.1E-24 2.3E-29 177.4 13.9 200 1-231 1-211 (214)
6 PLN03243 haloacid dehalogenase 99.9 5.7E-24 1.2E-28 177.3 16.3 203 3-243 24-247 (260)
7 TIGR03351 PhnX-like phosphonat 99.9 8E-24 1.7E-28 173.0 16.9 194 3-230 1-219 (220)
8 PLN02954 phosphoserine phospha 99.9 2.5E-23 5.5E-28 170.5 18.9 207 1-230 10-223 (224)
9 PRK13226 phosphoglycolate phos 99.9 3.9E-24 8.5E-29 175.8 14.1 195 2-230 11-224 (229)
10 PRK13478 phosphonoacetaldehyde 99.9 5.5E-23 1.2E-27 172.8 18.6 139 69-238 99-262 (267)
11 PRK13225 phosphoglycolate phos 99.9 9.9E-24 2.1E-28 177.0 13.7 195 2-235 61-272 (273)
12 PLN02770 haloacid dehalogenase 99.9 2.4E-23 5.1E-28 173.1 14.8 192 2-225 21-230 (248)
13 PRK10826 2-deoxyglucose-6-phos 99.9 7.5E-23 1.6E-27 167.5 15.9 195 2-228 6-217 (222)
14 TIGR01422 phosphonatase phosph 99.9 1.4E-22 3.1E-27 169.1 17.2 106 69-200 97-204 (253)
15 PRK09449 dUMP phosphatase; Pro 99.9 2E-22 4.4E-27 165.1 17.5 129 69-231 93-223 (224)
16 PRK11587 putative phosphatase; 99.9 1.2E-22 2.5E-27 165.9 15.9 165 1-196 1-182 (218)
17 TIGR01454 AHBA_synth_RP 3-amin 99.9 5.8E-23 1.2E-27 166.1 13.9 133 68-231 72-204 (205)
18 PRK13222 phosphoglycolate phos 99.9 2.2E-22 4.9E-27 165.0 16.4 201 1-233 4-224 (226)
19 TIGR01449 PGP_bact 2-phosphogl 99.9 6.8E-23 1.5E-27 166.6 13.1 130 69-229 83-212 (213)
20 PRK09552 mtnX 2-hydroxy-3-keto 99.9 2.2E-22 4.8E-27 164.3 15.7 209 1-235 1-217 (219)
21 TIGR00338 serB phosphoserine p 99.9 3E-22 6.4E-27 163.6 16.1 172 2-190 13-189 (219)
22 PLN02575 haloacid dehalogenase 99.9 2.2E-22 4.8E-27 173.8 16.0 199 3-236 131-347 (381)
23 PRK14988 GMP/IMP nucleotidase; 99.9 2.2E-22 4.8E-27 164.7 14.3 105 68-197 90-194 (224)
24 PRK13223 phosphoglycolate phos 99.9 3.1E-22 6.8E-27 168.4 15.4 199 3-232 13-231 (272)
25 TIGR02253 CTE7 HAD superfamily 99.9 5.4E-22 1.2E-26 162.2 15.1 105 69-198 92-197 (221)
26 COG0637 Predicted phosphatase/ 99.9 5.5E-22 1.2E-26 161.9 13.1 172 3-201 2-190 (221)
27 TIGR01491 HAD-SF-IB-PSPlk HAD- 99.9 4.4E-21 9.5E-26 154.4 17.7 172 3-189 4-183 (201)
28 TIGR01428 HAD_type_II 2-haloal 99.9 1.9E-21 4E-26 156.4 15.2 111 64-199 85-195 (198)
29 PRK13582 thrH phosphoserine ph 99.9 6.1E-21 1.3E-25 154.2 16.9 201 3-236 1-201 (205)
30 PRK10563 6-phosphogluconate ph 99.9 7.2E-22 1.6E-26 161.6 11.4 168 2-198 3-188 (221)
31 TIGR02009 PGMB-YQAB-SF beta-ph 99.9 2.1E-21 4.6E-26 154.3 12.4 163 3-193 1-183 (185)
32 TIGR02254 YjjG/YfnB HAD superf 99.9 1.1E-20 2.3E-25 154.8 15.8 128 69-230 95-224 (224)
33 TIGR03333 salvage_mtnX 2-hydro 99.9 2.4E-20 5.2E-25 151.8 17.0 205 6-234 2-212 (214)
34 PRK11133 serB phosphoserine ph 99.9 3.5E-20 7.6E-25 158.4 17.3 201 3-231 110-316 (322)
35 TIGR01990 bPGM beta-phosphoglu 99.9 4.4E-21 9.5E-26 152.5 10.9 163 5-195 1-184 (185)
36 PRK10725 fructose-1-P/6-phosph 99.9 1.4E-20 3.1E-25 150.0 13.6 164 3-195 5-185 (188)
37 PLN02940 riboflavin kinase 99.9 1.2E-20 2.6E-25 165.6 14.3 169 3-197 11-195 (382)
38 PRK10748 flavin mononucleotide 99.8 3.1E-20 6.7E-25 153.5 14.6 128 68-230 110-238 (238)
39 PRK06698 bifunctional 5'-methy 99.8 2.2E-20 4.7E-25 168.4 14.3 129 69-233 328-456 (459)
40 COG4359 Uncharacterized conser 99.8 1.1E-19 2.4E-24 137.7 15.7 210 1-235 1-216 (220)
41 COG0560 SerB Phosphoserine pho 99.8 3.7E-20 8.1E-25 149.5 13.9 169 2-187 4-178 (212)
42 TIGR02252 DREG-2 REG-2-like, H 99.8 3.5E-20 7.5E-25 149.6 12.7 98 70-193 104-202 (203)
43 TIGR02137 HSK-PSP phosphoserin 99.8 2.4E-19 5.1E-24 144.1 16.7 197 4-233 2-198 (203)
44 TIGR01993 Pyr-5-nucltdase pyri 99.8 7.1E-20 1.5E-24 145.5 13.1 102 69-194 82-183 (184)
45 TIGR01488 HAD-SF-IB Haloacid D 99.8 8.9E-20 1.9E-24 143.9 12.9 169 5-186 1-175 (177)
46 COG1011 Predicted hydrolase (H 99.8 5.9E-19 1.3E-23 144.9 18.3 130 70-232 98-228 (229)
47 PLN02779 haloacid dehalogenase 99.8 2E-19 4.4E-24 152.3 14.2 133 70-235 143-278 (286)
48 TIGR01548 HAD-SF-IA-hyp1 haloa 99.8 1.4E-19 3E-24 145.5 12.3 90 72-187 107-196 (197)
49 PF13419 HAD_2: Haloacid dehal 99.8 3.7E-20 8E-25 145.2 7.5 164 6-194 1-175 (176)
50 PRK09456 ?-D-glucose-1-phospha 99.8 8.4E-19 1.8E-23 141.1 14.1 102 70-196 83-185 (199)
51 PRK08942 D,D-heptose 1,7-bisph 99.8 3.4E-19 7.3E-24 141.3 11.1 137 69-232 27-178 (181)
52 TIGR01509 HAD-SF-IA-v3 haloaci 99.8 2.7E-19 5.9E-24 141.8 10.2 99 70-194 84-182 (183)
53 TIGR02247 HAD-1A3-hyp Epoxide 99.8 1.7E-19 3.6E-24 146.5 8.5 103 69-196 92-196 (211)
54 PLN02919 haloacid dehalogenase 99.8 2.3E-18 5E-23 167.7 16.9 208 2-243 74-300 (1057)
55 TIGR01549 HAD-SF-IA-v1 haloaci 99.8 1E-18 2.2E-23 134.8 11.4 93 69-189 62-154 (154)
56 TIGR00213 GmhB_yaeD D,D-heptos 99.8 2.9E-19 6.2E-24 141.0 8.5 137 69-227 24-175 (176)
57 KOG1615 Phosphoserine phosphat 99.8 6.8E-18 1.5E-22 129.2 14.6 168 3-186 16-190 (227)
58 TIGR01656 Histidinol-ppas hist 99.8 4.5E-19 9.8E-24 135.8 5.7 105 70-196 26-145 (147)
59 PHA02597 30.2 hypothetical pro 99.8 1.4E-18 3.1E-23 139.6 8.5 163 3-200 2-177 (197)
60 PRK06769 hypothetical protein; 99.8 3.6E-18 7.7E-23 134.2 8.8 134 69-230 26-171 (173)
61 TIGR01662 HAD-SF-IIIA HAD-supe 99.7 3.9E-18 8.4E-23 128.2 8.0 98 70-196 24-131 (132)
62 TIGR01490 HAD-SF-IB-hyp1 HAD-s 99.7 5.9E-17 1.3E-21 130.6 15.1 120 56-189 65-191 (202)
63 PLN02811 hydrolase 99.7 1.5E-17 3.4E-22 135.8 11.6 107 68-197 75-185 (220)
64 TIGR01261 hisB_Nterm histidino 99.7 3.8E-18 8.3E-23 132.0 6.5 107 69-197 27-148 (161)
65 TIGR01664 DNA-3'-Pase DNA 3'-p 99.7 1.5E-17 3.3E-22 129.5 9.7 93 72-191 43-157 (166)
66 TIGR01493 HAD-SF-IA-v2 Haloaci 99.7 1.2E-17 2.5E-22 131.7 8.9 90 66-187 85-174 (175)
67 TIGR01672 AphA HAD superfamily 99.7 6.1E-17 1.3E-21 132.4 11.1 143 4-196 64-211 (237)
68 TIGR01685 MDP-1 magnesium-depe 99.7 6.6E-18 1.4E-22 131.6 4.5 107 69-201 43-161 (174)
69 TIGR01670 YrbI-phosphatas 3-de 99.7 4.6E-17 1E-21 125.5 7.3 84 79-197 36-119 (154)
70 TIGR01544 HAD-SF-IE haloacid d 99.7 5.5E-15 1.2E-19 122.7 19.1 122 55-187 103-229 (277)
71 COG0561 Cof Predicted hydrolas 99.7 1E-15 2.2E-20 128.5 13.9 172 1-234 1-261 (264)
72 PRK01158 phosphoglycolate phos 99.7 1.1E-15 2.4E-20 125.7 13.3 141 1-197 1-198 (230)
73 TIGR01681 HAD-SF-IIIC HAD-supe 99.7 2.2E-16 4.8E-21 117.8 7.9 86 71-185 29-124 (128)
74 PRK15126 thiamin pyrimidine py 99.7 2.3E-15 5E-20 126.9 13.9 83 145-235 180-263 (272)
75 cd01427 HAD_like Haloacid deha 99.7 3.2E-16 6.8E-21 117.6 7.5 118 68-194 21-138 (139)
76 PRK10513 sugar phosphate phosp 99.7 2.2E-15 4.7E-20 126.9 13.4 81 145-234 188-268 (270)
77 PRK11590 hypothetical protein; 99.6 2.6E-15 5.6E-20 121.9 12.4 100 70-187 94-194 (211)
78 PRK10976 putative hydrolase; P 99.6 8E-15 1.7E-19 123.2 14.6 82 145-234 182-264 (266)
79 TIGR01545 YfhB_g-proteo haloac 99.6 1.2E-14 2.6E-19 117.6 14.0 100 70-187 93-193 (210)
80 PRK05446 imidazole glycerol-ph 99.6 2.1E-15 4.5E-20 129.9 10.0 109 68-198 27-150 (354)
81 TIGR01691 enolase-ppase 2,3-di 99.6 1.1E-14 2.4E-19 118.1 12.2 104 69-199 93-199 (220)
82 KOG3085 Predicted hydrolase (H 99.6 2.4E-14 5.1E-19 115.7 13.4 103 70-198 112-215 (237)
83 PRK10530 pyridoxal phosphate ( 99.6 2.5E-14 5.4E-19 120.6 14.2 80 146-234 192-271 (272)
84 PRK09484 3-deoxy-D-manno-octul 99.6 2.5E-15 5.4E-20 119.1 7.5 80 78-191 55-134 (183)
85 TIGR01668 YqeG_hyp_ppase HAD s 99.6 8.4E-15 1.8E-19 114.7 9.7 94 70-197 42-137 (170)
86 PRK00192 mannosyl-3-phosphogly 99.6 1.4E-13 3E-18 116.2 15.6 62 1-113 2-63 (273)
87 TIGR01487 SPP-like sucrose-pho 99.6 3.3E-14 7.1E-19 115.8 11.2 122 71-197 18-188 (215)
88 TIGR02726 phenyl_P_delta pheny 99.6 1.7E-15 3.6E-20 117.9 2.9 88 71-197 36-123 (169)
89 PLN02887 hydrolase family prot 99.5 7.3E-14 1.6E-18 127.7 13.7 80 145-233 499-578 (580)
90 TIGR01482 SPP-subfamily Sucros 99.5 1.2E-13 2.5E-18 113.2 11.2 122 71-197 15-190 (225)
91 COG2179 Predicted hydrolase of 99.5 1.4E-13 2.9E-18 103.6 10.2 94 70-197 45-139 (175)
92 smart00577 CPDc catalytic doma 99.5 2.2E-14 4.7E-19 109.9 6.1 98 69-198 43-141 (148)
93 KOG3109 Haloacid dehalogenase- 99.5 4.7E-13 1E-17 104.9 13.5 174 3-198 15-207 (244)
94 PF08282 Hydrolase_3: haloacid 99.5 1.6E-13 3.6E-18 113.6 11.6 123 71-198 15-228 (254)
95 KOG2914 Predicted haloacid-hal 99.5 1.5E-13 3.2E-18 110.7 10.7 171 3-197 10-197 (222)
96 COG0241 HisB Histidinol phosph 99.5 9.9E-14 2.1E-18 107.7 9.2 108 69-198 29-151 (181)
97 PRK11009 aphA acid phosphatase 99.5 1.6E-13 3.4E-18 112.2 9.3 95 69-197 112-212 (237)
98 PRK03669 mannosyl-3-phosphogly 99.5 1.8E-12 4E-17 109.2 15.7 86 146-235 180-269 (271)
99 PF12710 HAD: haloacid dehalog 99.5 2.2E-13 4.8E-18 108.6 8.7 96 74-185 92-191 (192)
100 PHA02530 pseT polynucleotide k 99.5 2E-13 4.4E-18 116.7 9.0 110 69-196 185-296 (300)
101 TIGR02463 MPGP_rel mannosyl-3- 99.5 9.3E-13 2E-17 107.6 11.8 49 145-196 171-219 (221)
102 TIGR01663 PNK-3'Pase polynucle 99.4 5E-13 1.1E-17 120.7 10.7 92 72-190 198-305 (526)
103 TIGR00099 Cof-subfamily Cof su 99.4 1.4E-12 3E-17 109.1 11.9 45 145-189 180-224 (256)
104 PF00702 Hydrolase: haloacid d 99.4 1.8E-13 3.8E-18 111.0 6.3 89 70-188 126-214 (215)
105 TIGR01686 FkbH FkbH-like domai 99.4 2.6E-13 5.7E-18 116.9 7.3 89 71-189 31-123 (320)
106 PLN02645 phosphoglycolate phos 99.4 3.2E-12 6.9E-17 109.7 13.0 76 152-231 230-308 (311)
107 TIGR01457 HAD-SF-IIA-hyp2 HAD- 99.4 1.5E-12 3.3E-17 108.2 10.7 51 151-202 177-228 (249)
108 PRK10444 UMP phosphatase; Prov 99.4 1.5E-12 3.3E-17 107.9 10.1 72 151-226 173-245 (248)
109 PRK10187 trehalose-6-phosphate 99.4 2.1E-11 4.4E-16 102.3 15.7 98 146-258 167-265 (266)
110 PRK08238 hypothetical protein; 99.4 5.2E-12 1.1E-16 113.6 11.8 96 69-196 70-165 (479)
111 PTZ00174 phosphomannomutase; P 99.4 1.5E-11 3.3E-16 102.1 13.3 50 144-197 179-232 (247)
112 TIGR01485 SPP_plant-cyano sucr 99.3 4.7E-12 1E-16 105.4 9.5 53 146-198 160-212 (249)
113 TIGR01486 HAD-SF-IIB-MPGP mann 99.3 2.9E-11 6.3E-16 101.1 13.1 50 146-198 169-220 (256)
114 TIGR01484 HAD-SF-IIB HAD-super 99.3 1E-11 2.2E-16 100.2 9.8 43 145-187 155-197 (204)
115 COG1778 Low specificity phosph 99.3 9E-13 2E-17 98.0 3.0 84 70-189 36-119 (170)
116 TIGR01684 viral_ppase viral ph 99.3 2.8E-11 6.2E-16 100.4 11.6 131 3-182 126-264 (301)
117 TIGR01459 HAD-SF-IIA-hyp4 HAD- 99.3 2.2E-11 4.8E-16 100.9 10.1 85 71-185 24-111 (242)
118 TIGR01452 PGP_euk phosphoglyco 99.3 8.1E-13 1.8E-17 111.8 1.4 110 73-206 145-256 (279)
119 PHA03398 viral phosphatase sup 99.3 6.1E-11 1.3E-15 98.5 11.3 131 3-182 128-266 (303)
120 COG0647 NagD Predicted sugar p 99.3 3E-11 6.5E-16 100.2 9.2 78 151-232 189-267 (269)
121 TIGR02471 sucr_syn_bact_C sucr 99.2 1.8E-10 3.9E-15 95.1 11.5 42 146-187 152-193 (236)
122 TIGR02251 HIF-SF_euk Dullard-l 99.2 1.1E-10 2.3E-15 90.7 9.1 90 69-187 40-130 (162)
123 TIGR01533 lipo_e_P4 5'-nucleot 99.2 2.7E-10 5.9E-15 94.7 11.5 85 69-185 116-204 (266)
124 TIGR02461 osmo_MPG_phos mannos 99.2 1.3E-10 2.8E-15 95.1 9.3 40 73-112 17-56 (225)
125 PRK12702 mannosyl-3-phosphogly 99.1 7.2E-10 1.6E-14 92.3 12.3 43 71-113 18-60 (302)
126 PRK14502 bifunctional mannosyl 99.1 7E-10 1.5E-14 101.9 12.5 38 150-187 610-649 (694)
127 PF12689 Acid_PPase: Acid Phos 99.1 4.8E-11 1E-15 92.3 4.3 102 69-190 43-145 (169)
128 PF08645 PNK3P: Polynucleotide 99.1 1.4E-10 3.1E-15 89.5 4.0 83 72-181 30-130 (159)
129 TIGR01458 HAD-SF-IIA-hyp3 HAD- 99.0 1.4E-10 3.1E-15 96.8 3.7 132 73-230 122-254 (257)
130 PLN02382 probable sucrose-phos 99.0 2.1E-09 4.5E-14 95.5 11.0 54 144-197 166-222 (413)
131 PLN02423 phosphomannomutase 99.0 8.4E-09 1.8E-13 85.6 13.9 39 143-186 179-221 (245)
132 PF09419 PGP_phosphatase: Mito 99.0 2.4E-09 5.2E-14 82.6 9.0 94 69-197 57-165 (168)
133 PRK14501 putative bifunctional 99.0 1.4E-08 3.1E-13 96.8 15.6 76 145-234 649-724 (726)
134 TIGR00685 T6PP trehalose-phosp 99.0 9.5E-09 2.1E-13 85.3 12.0 76 146-233 160-242 (244)
135 PTZ00445 p36-lilke protein; Pr 99.0 1.1E-09 2.4E-14 86.5 5.8 112 71-197 75-206 (219)
136 COG4996 Predicted phosphatase 99.0 2.4E-09 5.2E-14 77.3 6.9 83 69-180 39-127 (164)
137 TIGR02244 HAD-IG-Ncltidse HAD 98.9 1.5E-08 3.3E-13 87.0 11.0 126 70-197 183-324 (343)
138 PLN02177 glycerol-3-phosphate 98.8 1.7E-07 3.6E-12 84.9 14.9 96 71-187 110-206 (497)
139 PLN02205 alpha,alpha-trehalose 98.8 1.1E-07 2.4E-12 91.3 14.4 79 145-234 754-845 (854)
140 TIGR01512 ATPase-IB2_Cd heavy 98.8 2.9E-08 6.4E-13 91.4 10.2 119 69-231 360-479 (536)
141 TIGR01525 ATPase-IB_hvy heavy 98.8 3E-08 6.5E-13 91.8 10.1 118 69-231 382-500 (556)
142 smart00775 LNS2 LNS2 domain. T 98.8 3.9E-08 8.5E-13 75.8 9.1 104 71-191 27-141 (157)
143 PF05116 S6PP: Sucrose-6F-phos 98.8 7.7E-09 1.7E-13 85.9 5.0 52 145-197 157-208 (247)
144 PLN02580 trehalose-phosphatase 98.8 2.3E-07 5E-12 80.9 14.1 82 146-237 293-380 (384)
145 PF13344 Hydrolase_6: Haloacid 98.8 8.6E-08 1.9E-12 68.3 9.3 49 71-119 14-65 (101)
146 PF13242 Hydrolase_like: HAD-h 98.7 5.8E-09 1.3E-13 70.1 2.7 69 154-226 6-75 (75)
147 TIGR01460 HAD-SF-IIA Haloacid 98.7 3.6E-08 7.9E-13 81.4 7.5 46 151-196 187-234 (236)
148 TIGR01459 HAD-SF-IIA-hyp4 HAD- 98.6 9.8E-09 2.1E-13 85.1 1.6 97 73-195 140-240 (242)
149 TIGR01511 ATPase-IB1_Cu copper 98.6 2.4E-07 5.2E-12 85.8 10.7 88 69-196 403-490 (562)
150 COG4229 Predicted enolase-phos 98.6 7.8E-07 1.7E-11 68.2 10.5 104 69-199 101-207 (229)
151 COG4087 Soluble P-type ATPase 98.6 3.5E-07 7.5E-12 66.3 7.8 119 69-232 28-148 (152)
152 TIGR02250 FCP1_euk FCP1-like p 98.5 3.3E-07 7.1E-12 70.5 7.4 51 69-120 56-108 (156)
153 KOG2882 p-Nitrophenyl phosphat 98.5 9.1E-07 2E-11 73.4 10.3 56 151-206 223-279 (306)
154 COG4030 Uncharacterized protei 98.5 7.9E-06 1.7E-10 65.0 15.0 189 6-199 3-237 (315)
155 PRK10671 copA copper exporting 98.5 5.2E-07 1.1E-11 87.5 10.2 117 70-231 649-765 (834)
156 COG2217 ZntA Cation transport 98.5 7.4E-07 1.6E-11 83.6 10.8 116 70-231 536-652 (713)
157 PF05822 UMPH-1: Pyrimidine 5' 98.5 3.3E-06 7.2E-11 68.9 12.2 121 56-188 73-198 (246)
158 PLN03017 trehalose-phosphatase 98.5 1.3E-05 2.8E-10 69.5 16.2 79 150-238 280-363 (366)
159 KOG3040 Predicted sugar phosph 98.4 1.7E-06 3.8E-11 67.8 9.2 78 151-232 180-258 (262)
160 TIGR01675 plant-AP plant acid 98.4 5.3E-06 1.2E-10 67.4 12.4 45 69-113 118-165 (229)
161 TIGR01689 EcbF-BcbF capsule bi 98.4 1.7E-06 3.6E-11 63.8 7.8 48 70-119 23-85 (126)
162 PF03767 Acid_phosphat_B: HAD 98.4 1.3E-06 2.8E-11 71.6 7.5 90 70-184 114-207 (229)
163 TIGR01458 HAD-SF-IIA-hyp3 HAD- 98.4 2.1E-06 4.6E-11 71.8 8.9 49 71-119 21-72 (257)
164 TIGR01522 ATPase-IIA2_Ca golgi 98.3 3.8E-06 8.3E-11 81.9 11.2 136 71-232 528-672 (884)
165 TIGR01497 kdpB K+-transporting 98.3 2.6E-06 5.7E-11 79.7 9.5 115 71-231 446-561 (675)
166 PRK01122 potassium-transportin 98.3 3.2E-06 7E-11 79.3 10.0 116 71-232 445-561 (679)
167 PLN02151 trehalose-phosphatase 98.3 2E-05 4.3E-10 68.1 14.0 79 150-238 266-349 (354)
168 PRK14010 potassium-transportin 98.3 2.9E-06 6.4E-11 79.5 9.6 115 71-231 441-556 (673)
169 PRK11033 zntA zinc/cadmium/mer 98.3 2E-06 4.3E-11 82.2 7.8 115 70-231 567-681 (741)
170 PF05152 DUF705: Protein of un 98.3 1.5E-05 3.3E-10 65.7 11.3 111 72-182 143-260 (297)
171 PF03031 NIF: NLI interacting 98.2 7.5E-06 1.6E-10 63.3 7.6 85 69-182 34-119 (159)
172 TIGR01680 Veg_Stor_Prot vegeta 98.2 4E-05 8.7E-10 63.5 12.0 45 69-113 143-190 (275)
173 KOG0207 Cation transport ATPas 98.1 2.8E-05 6E-10 73.3 10.7 116 71-232 723-839 (951)
174 PRK15122 magnesium-transportin 98.1 1.7E-05 3.6E-10 77.4 9.7 133 71-232 550-691 (903)
175 TIGR01524 ATPase-IIIB_Mg magne 98.1 2.1E-05 4.5E-10 76.6 10.2 132 71-231 515-655 (867)
176 PRK10517 magnesium-transportin 98.1 2.2E-05 4.8E-10 76.5 9.7 133 71-232 550-691 (902)
177 COG3769 Predicted hydrolase (H 98.0 5.9E-05 1.3E-09 59.9 10.1 44 152-198 190-235 (274)
178 TIGR01116 ATPase-IIA1_Ca sarco 98.0 4.3E-05 9.4E-10 74.9 11.4 134 71-231 537-683 (917)
179 TIGR01647 ATPase-IIIA_H plasma 98.0 3.7E-05 8.1E-10 73.8 10.6 131 71-231 442-587 (755)
180 PF11019 DUF2608: Protein of u 98.0 7E-05 1.5E-09 62.2 10.9 124 70-200 80-210 (252)
181 COG2503 Predicted secreted aci 98.0 6.4E-05 1.4E-09 60.6 9.4 123 3-185 79-209 (274)
182 TIGR01517 ATPase-IIB_Ca plasma 98.0 7E-05 1.5E-09 73.7 11.4 132 71-230 579-721 (941)
183 PF08235 LNS2: LNS2 (Lipin/Ned 97.9 6.1E-05 1.3E-09 57.4 8.1 106 71-191 27-141 (157)
184 TIGR01523 ATPase-IID_K-Na pota 97.9 0.0001 2.2E-09 73.1 10.9 140 71-231 646-799 (1053)
185 COG3700 AphA Acid phosphatase 97.9 1.3E-05 2.7E-10 61.5 3.4 94 73-198 116-213 (237)
186 TIGR01456 CECR5 HAD-superfamil 97.8 7.6E-05 1.6E-09 64.5 8.0 40 72-111 17-64 (321)
187 PLN02499 glycerol-3-phosphate 97.7 0.0015 3.3E-08 58.6 14.7 158 3-185 8-188 (498)
188 TIGR01106 ATPase-IIC_X-K sodiu 97.7 0.00036 7.8E-09 69.1 11.9 41 71-111 568-608 (997)
189 KOG0202 Ca2+ transporting ATPa 97.7 0.0005 1.1E-08 64.6 11.8 136 71-232 584-732 (972)
190 COG0474 MgtA Cation transport 97.7 0.00026 5.7E-09 69.4 10.5 105 70-198 546-664 (917)
191 KOG3128 Uncharacterized conser 97.6 7.4E-05 1.6E-09 60.5 4.1 119 57-186 122-245 (298)
192 TIGR02245 HAD_IIID1 HAD-superf 97.6 0.00038 8.3E-09 55.4 8.1 40 71-111 45-84 (195)
193 PF06941 NT5C: 5' nucleotidase 97.6 0.00014 3.1E-09 57.9 5.4 32 67-98 69-100 (191)
194 COG3882 FkbH Predicted enzyme 97.5 0.0004 8.7E-09 61.4 7.2 92 70-187 254-345 (574)
195 PLN03063 alpha,alpha-trehalose 97.4 0.0081 1.7E-07 58.2 16.5 39 70-108 531-570 (797)
196 COG1877 OtsB Trehalose-6-phosp 97.3 0.0028 6.1E-08 52.9 10.6 41 149-189 178-218 (266)
197 TIGR01456 CECR5 HAD-superfamil 97.3 0.00046 1E-08 59.6 5.9 75 151-230 232-320 (321)
198 PF05761 5_nucleotid: 5' nucle 97.3 0.00065 1.4E-08 60.9 6.6 124 72-197 184-325 (448)
199 PF02358 Trehalose_PPase: Treh 97.2 0.00088 1.9E-08 55.2 6.4 45 147-191 159-206 (235)
200 TIGR01652 ATPase-Plipid phosph 97.1 0.0024 5.1E-08 63.9 9.2 41 71-111 631-671 (1057)
201 TIGR01494 ATPase_P-type ATPase 97.1 0.0013 2.9E-08 60.3 6.8 86 70-197 346-431 (499)
202 TIGR01657 P-ATPase-V P-type AT 97.1 0.0017 3.8E-08 64.8 7.6 42 70-111 655-696 (1054)
203 COG2216 KdpB High-affinity K+ 96.9 0.0031 6.7E-08 56.5 6.7 87 71-196 447-533 (681)
204 KOG2134 Polynucleotide kinase 96.8 0.0025 5.4E-08 55.0 5.6 83 70-179 103-201 (422)
205 PLN03190 aminophospholipid tra 96.8 0.0081 1.8E-07 60.4 9.9 41 70-110 725-765 (1178)
206 TIGR01452 PGP_euk phosphoglyco 96.7 0.013 2.7E-07 49.7 8.9 50 70-119 17-69 (279)
207 KOG2116 Protein involved in pl 96.5 0.032 6.9E-07 51.4 10.9 134 3-190 530-671 (738)
208 TIGR02468 sucrsPsyn_pln sucros 96.1 0.03 6.5E-07 55.2 9.0 77 98-197 923-1001(1050)
209 KOG2961 Predicted hydrolase (H 95.9 0.12 2.6E-06 39.0 9.2 44 153-196 122-167 (190)
210 COG4502 5'(3')-deoxyribonucleo 95.5 0.039 8.4E-07 41.0 5.4 53 66-119 63-121 (180)
211 KOG0204 Calcium transporting A 95.1 0.15 3.3E-06 48.7 9.2 137 70-230 646-791 (1034)
212 PLN03064 alpha,alpha-trehalose 95.0 0.068 1.5E-06 52.4 6.9 40 70-109 621-661 (934)
213 KOG3189 Phosphomannomutase [Li 95.0 0.064 1.4E-06 42.3 5.4 14 4-17 12-25 (252)
214 KOG2630 Enolase-phosphatase E- 94.9 0.16 3.4E-06 41.1 7.5 99 70-199 122-227 (254)
215 KOG2470 Similar to IMP-GMP spe 94.7 0.07 1.5E-06 45.7 5.4 104 73-185 242-363 (510)
216 KOG1618 Predicted phosphatase 94.7 0.11 2.4E-06 44.0 6.5 41 71-111 51-99 (389)
217 KOG1605 TFIIF-interacting CTD 94.5 0.012 2.5E-07 49.0 0.3 40 70-110 130-169 (262)
218 KOG0206 P-type ATPase [General 94.3 0.19 4.1E-06 50.1 8.0 40 71-110 651-690 (1151)
219 COG4850 Uncharacterized conser 94.0 0.61 1.3E-05 39.8 9.3 95 69-184 194-293 (373)
220 COG5610 Predicted hydrolase (H 93.7 0.36 7.9E-06 43.0 7.9 100 69-193 95-199 (635)
221 KOG0210 P-type ATPase [Inorgan 93.7 0.27 5.9E-06 46.1 7.4 96 71-197 711-808 (1051)
222 TIGR01658 EYA-cons_domain eyes 91.4 0.39 8.4E-06 39.3 4.7 39 151-189 212-250 (274)
223 COG5083 SMP2 Uncharacterized p 91.1 0.3 6.5E-06 43.2 4.0 17 3-19 375-391 (580)
224 COG5663 Uncharacterized conser 88.1 0.94 2E-05 34.9 4.3 34 70-104 71-104 (194)
225 KOG0209 P-type ATPase [Inorgan 87.3 2.6 5.6E-05 40.7 7.4 43 69-111 673-715 (1160)
226 KOG0203 Na+/K+ ATPase, alpha s 84.2 2.2 4.8E-05 41.1 5.5 40 71-110 590-629 (1019)
227 PF06437 ISN1: IMP-specific 5' 83.0 3.6 7.7E-05 36.1 5.9 34 73-106 168-201 (408)
228 KOG4549 Magnesium-dependent ph 80.6 8.4 0.00018 28.3 6.1 92 69-181 42-134 (144)
229 PF06189 5-nucleotidase: 5'-nu 80.1 3 6.5E-05 34.6 4.2 74 74-186 167-249 (264)
230 KOG0208 Cation transport ATPas 74.2 20 0.00044 35.6 8.4 51 69-119 703-753 (1140)
231 KOG0205 Plasma membrane H+-tra 73.6 8.3 0.00018 36.4 5.6 95 72-187 493-602 (942)
232 COG0731 Fe-S oxidoreductases [ 72.8 6.4 0.00014 33.5 4.4 35 69-103 90-125 (296)
233 KOG2469 IMP-GMP specific 5'-nu 70.7 16 0.00034 32.4 6.4 117 75-196 202-333 (424)
234 PF04312 DUF460: Protein of un 69.7 17 0.00036 27.2 5.5 36 75-110 64-101 (138)
235 PF06014 DUF910: Bacterial pro 68.8 0.63 1.4E-05 29.5 -1.8 25 157-185 6-30 (62)
236 KOG1359 Glycine C-acetyltransf 68.3 18 0.00039 30.8 6.0 132 71-236 271-409 (417)
237 PRK13717 conjugal transfer pro 68.1 9.3 0.0002 28.0 3.8 12 3-14 45-56 (128)
238 KOG0323 TFIIF-interacting CTD 66.9 11 0.00024 35.6 4.9 51 69-120 199-251 (635)
239 KOG3107 Predicted haloacid deh 65.4 12 0.00025 33.0 4.5 37 152-189 408-444 (468)
240 PLN02588 glycerol-3-phosphate 63.5 84 0.0018 29.1 9.7 52 72-132 134-186 (525)
241 PRK13762 tRNA-modifying enzyme 59.2 19 0.00041 31.2 4.8 31 69-99 140-170 (322)
242 PF04413 Glycos_transf_N: 3-De 58.0 14 0.0003 29.2 3.5 71 78-182 109-184 (186)
243 PF03332 PMM: Eukaryotic phosp 52.1 10 0.00023 30.7 1.9 62 149-234 158-219 (220)
244 PF03193 DUF258: Protein of un 50.4 76 0.0017 24.4 6.4 58 77-165 2-59 (161)
245 PF03332 PMM: Eukaryotic phosp 50.3 26 0.00056 28.5 3.9 43 76-119 1-43 (220)
246 PRK10076 pyruvate formate lyas 48.5 45 0.00098 27.0 5.1 37 71-107 50-89 (213)
247 TIGR02495 NrdG2 anaerobic ribo 47.2 47 0.001 25.9 5.1 30 70-99 73-102 (191)
248 TIGR03365 Bsubt_queE 7-cyano-7 46.5 23 0.00049 29.2 3.2 28 72-99 85-112 (238)
249 PF00875 DNA_photolyase: DNA p 45.8 36 0.00078 26.0 4.1 44 73-120 52-95 (165)
250 PF02593 dTMP_synthase: Thymid 44.6 1.1E+02 0.0024 24.9 6.7 87 70-185 58-150 (217)
251 PF06437 ISN1: IMP-specific 5' 44.5 29 0.00064 30.6 3.6 32 154-185 350-390 (408)
252 COG4483 Uncharacterized protei 43.6 6.3 0.00014 25.1 -0.4 26 157-186 6-31 (68)
253 TIGR02744 TrbI_Ftype type-F co 42.7 79 0.0017 22.8 5.0 11 4-14 33-43 (112)
254 TIGR02826 RNR_activ_nrdG3 anae 41.5 72 0.0015 24.1 5.0 26 73-98 74-99 (147)
255 PF04123 DUF373: Domain of unk 41.4 99 0.0021 27.1 6.4 28 156-185 88-115 (344)
256 TIGR00221 nagA N-acetylglucosa 40.1 1.2E+02 0.0026 26.9 7.0 34 73-106 176-210 (380)
257 cd05008 SIS_GlmS_GlmD_1 SIS (S 38.6 52 0.0011 23.5 3.8 32 72-103 58-89 (126)
258 cd05014 SIS_Kpsf KpsF-like pro 38.5 42 0.00091 24.1 3.3 32 72-103 59-90 (128)
259 PF13911 AhpC-TSA_2: AhpC/TSA 37.4 1.1E+02 0.0023 21.6 5.3 39 78-119 4-42 (115)
260 PF09269 DUF1967: Domain of un 37.3 33 0.00072 22.2 2.3 25 154-178 41-65 (69)
261 PF10307 DUF2410: Hypothetical 37.2 2.2E+02 0.0047 22.8 8.0 89 73-185 56-149 (197)
262 PF09949 DUF2183: Uncharacteri 36.6 46 0.001 23.4 3.0 31 153-185 50-81 (100)
263 PF14336 DUF4392: Domain of un 35.7 2.8E+02 0.006 23.7 8.8 38 73-110 62-100 (291)
264 PF08444 Gly_acyl_tr_C: Aralky 35.6 80 0.0017 21.7 4.0 35 76-110 41-75 (89)
265 PLN00135 malate dehydrogenase 35.5 1.7E+02 0.0037 25.2 6.9 64 87-180 101-167 (309)
266 TIGR02244 HAD-IG-Ncltidse HAD 35.1 33 0.00072 30.0 2.6 17 3-19 12-28 (343)
267 cd02071 MM_CoA_mut_B12_BD meth 35.1 1.1E+02 0.0023 22.1 5.0 41 73-113 64-106 (122)
268 cd05017 SIS_PGI_PMI_1 The memb 34.6 1.1E+02 0.0023 21.9 4.9 36 72-109 55-90 (119)
269 COG4943 Predicted signal trans 33.8 1E+02 0.0022 28.3 5.4 102 9-110 308-437 (524)
270 TIGR02109 PQQ_syn_pqqE coenzym 33.0 85 0.0018 27.4 4.9 40 70-110 64-106 (358)
271 PRK05301 pyrroloquinoline quin 32.4 90 0.002 27.5 5.0 41 69-110 72-115 (378)
272 PF01380 SIS: SIS domain SIS d 32.3 81 0.0018 22.5 4.0 32 72-103 65-96 (131)
273 cd01766 Ufm1 Urm1-like ubiquit 31.9 1.5E+02 0.0033 19.5 4.7 47 152-201 26-72 (82)
274 cd05710 SIS_1 A subgroup of th 31.7 74 0.0016 22.8 3.6 31 72-102 59-89 (120)
275 TIGR03470 HpnH hopanoid biosyn 31.6 48 0.001 28.6 3.0 29 70-98 83-111 (318)
276 TIGR02493 PFLA pyruvate format 29.8 1.3E+02 0.0029 24.2 5.3 38 70-107 76-118 (235)
277 TIGR02494 PFLE_PFLC glycyl-rad 29.4 1.1E+02 0.0024 25.8 4.9 28 71-98 137-165 (295)
278 TIGR02765 crypto_DASH cryptoch 29.1 1.1E+02 0.0025 27.4 5.1 39 73-111 60-98 (429)
279 TIGR03595 Obg_CgtA_exten Obg f 29.1 56 0.0012 21.1 2.3 26 154-179 41-66 (69)
280 PRK11867 2-oxoglutarate ferred 29.1 74 0.0016 27.1 3.6 24 156-179 30-53 (286)
281 PF00578 AhpC-TSA: AhpC/TSA fa 29.0 1.2E+02 0.0027 21.2 4.5 37 74-110 46-82 (124)
282 PRK11866 2-oxoacid ferredoxin 28.3 85 0.0018 26.6 3.9 28 151-178 12-42 (279)
283 TIGR03127 RuMP_HxlB 6-phospho 28.3 85 0.0018 24.2 3.7 32 72-103 84-115 (179)
284 cd04728 ThiG Thiazole synthase 28.0 2.7E+02 0.0059 23.2 6.5 119 69-236 102-226 (248)
285 cd05013 SIS_RpiR RpiR-like pro 27.9 89 0.0019 22.4 3.6 30 73-102 73-102 (139)
286 PF05673 DUF815: Protein of un 27.9 3.2E+02 0.007 22.8 7.0 51 75-125 68-118 (249)
287 TIGR00640 acid_CoA_mut_C methy 27.9 1.6E+02 0.0035 21.7 4.9 38 74-111 68-107 (132)
288 PRK11145 pflA pyruvate formate 27.4 86 0.0019 25.6 3.7 28 71-98 82-110 (246)
289 KOG0541 Alkyl hydroperoxide re 26.6 1.7E+02 0.0037 22.5 4.7 41 73-113 64-105 (171)
290 smart00497 IENR1 Intron encode 26.4 73 0.0016 18.8 2.4 28 3-30 2-30 (53)
291 PF07453 NUMOD1: NUMOD1 domain 25.9 86 0.0019 17.1 2.4 29 3-31 1-30 (37)
292 TIGR03278 methan_mark_10 putat 25.6 1.5E+02 0.0032 26.7 5.0 28 70-97 85-113 (404)
293 PF06901 FrpC: RTX iron-regula 25.5 39 0.00084 26.8 1.2 15 3-17 58-72 (271)
294 TIGR01758 MDH_euk_cyt malate d 25.2 3.6E+02 0.0077 23.4 7.2 23 155-177 156-181 (324)
295 PF15614 WHIM3: WSTF, HB1, Itc 25.1 19 0.00042 21.3 -0.4 41 220-260 4-45 (46)
296 smart00266 CAD Domains present 24.9 42 0.00091 22.2 1.1 16 4-19 39-54 (74)
297 PF08620 RPAP1_C: RPAP1-like, 24.6 26 0.00056 23.1 0.1 9 7-15 4-12 (73)
298 cd04795 SIS SIS domain. SIS (S 24.6 1E+02 0.0022 20.0 3.1 23 72-94 59-81 (87)
299 cd06537 CIDE_N_B CIDE_N domain 24.5 39 0.00085 22.7 0.9 16 4-19 40-55 (81)
300 cd06539 CIDE_N_A CIDE_N domain 24.4 41 0.00088 22.5 1.0 16 4-19 41-56 (78)
301 cd05006 SIS_GmhA Phosphoheptos 23.9 1E+02 0.0022 23.8 3.4 28 72-99 113-140 (177)
302 PF01976 DUF116: Protein of un 23.6 2.4E+02 0.0051 21.7 5.2 34 75-110 74-107 (158)
303 KOG2832 TFIIF-interacting CTD 23.4 1.9E+02 0.0042 25.5 5.1 42 71-113 214-255 (393)
304 COG1180 PflA Pyruvate-formate 23.2 1E+02 0.0022 25.8 3.4 27 73-99 98-124 (260)
305 PRK13937 phosphoheptose isomer 23.0 1.2E+02 0.0026 23.8 3.7 31 72-102 118-148 (188)
306 PLN00112 malate dehydrogenase 22.9 3.2E+02 0.0069 25.0 6.7 72 77-178 206-283 (444)
307 smart00540 LEM in nuclear memb 22.6 98 0.0021 18.1 2.3 31 77-107 9-39 (44)
308 PF00072 Response_reg: Respons 22.3 1.7E+02 0.0037 19.7 4.1 37 75-111 57-95 (112)
309 PRK00208 thiG thiazole synthas 22.3 4.5E+02 0.0098 21.9 6.8 119 69-236 102-226 (250)
310 PF02142 MGS: MGS-like domain 21.6 85 0.0018 21.5 2.3 21 75-96 1-21 (95)
311 PF08328 ASL_C: Adenylosuccina 21.6 2.7E+02 0.0057 20.2 4.7 31 56-86 82-112 (115)
312 TIGR00441 gmhA phosphoheptose 21.4 1.3E+02 0.0028 22.7 3.4 29 72-100 91-119 (154)
313 COG0602 NrdG Organic radical a 21.3 1E+02 0.0022 24.9 2.9 27 73-99 85-111 (212)
314 cd05005 SIS_PHI Hexulose-6-pho 21.3 1.3E+02 0.0029 23.1 3.6 32 72-103 87-118 (179)
315 PRK01018 50S ribosomal protein 21.3 2.9E+02 0.0063 19.1 5.0 38 68-105 13-50 (99)
316 PTZ00325 malate dehydrogenase; 21.3 4.9E+02 0.011 22.5 7.3 74 75-179 104-185 (321)
317 cd03018 PRX_AhpE_like Peroxire 21.2 2.5E+02 0.0055 20.4 5.0 37 74-110 49-85 (149)
318 COG0263 ProB Glutamate 5-kinas 20.6 1.1E+02 0.0024 26.9 3.1 23 74-96 31-53 (369)
319 cd01615 CIDE_N CIDE_N domain, 20.5 58 0.0013 21.8 1.1 16 4-19 41-56 (78)
320 PF00696 AA_kinase: Amino acid 20.3 2.4E+02 0.0052 22.7 5.1 38 74-112 20-57 (242)
321 cd02072 Glm_B12_BD B12 binding 20.3 1.9E+02 0.0041 21.3 3.9 43 73-119 64-114 (128)
322 TIGR03556 photolyase_8HDF deox 20.0 1.5E+02 0.0032 27.2 4.1 39 73-111 54-92 (471)
No 1
>KOG3120 consensus Predicted haloacid dehalogenase-like hydrolase [General function prediction only]
Probab=100.00 E-value=9.4e-36 Score=230.91 Aligned_cols=237 Identities=57% Similarity=1.043 Sum_probs=222.6
Q ss_pred CceEEEEecCCCCCCCCchHHHHHHhCchHHHHHHHccCC---hhHHHHHHHHHHHhCCCCHHHHHHHhcCCCCChhHHH
Q 044617 2 ADVVVVFDFDRTLIDDDSDNWVVTQMGLTHLFNQLRSTLP---WNSLMDRMMKELHSQGKTVEDIANCLRQCPLDSHVAA 78 (265)
Q Consensus 2 ~~k~iifD~DGTL~ds~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~e 78 (265)
+..+++||||-||+|.+++.++...++....+.++..+.. |..++++.++++++.|.+.+++...+..+++.||+.+
T Consensus 12 ~ril~~FDFD~TIid~dSD~wVv~~lp~~~l~~qL~~t~p~~~Wne~M~rv~k~Lheqgv~~~~ik~~~r~iP~~Pgmv~ 91 (256)
T KOG3120|consen 12 PRILLVFDFDRTIIDQDSDNWVVDELPTTDLFNQLRDTYPKGFWNELMDRVFKELHEQGVRIAEIKQVLRSIPIVPGMVR 91 (256)
T ss_pred CcEEEEEecCceeecCCcchHHHHhcccchhHHHHHHhcccchHHHHHHHHHHHHHHcCCCHHHHHHHHhcCCCCccHHH
Confidence 4578999999999999999999999999998888877765 9999999999999999999999999999999999999
Q ss_pred HHHHHHHcCC-cEEEEeCCCHHHHHHHHHhcCcccccceEEecCceecCCCceEEeeccccccCCCcccccCCCCchHHH
Q 044617 79 AIKSAHSLGC-DLKIVSDANQFYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRILPYHDSTLSHHGCNLCPSNLCKGFV 157 (265)
Q Consensus 79 ~l~~l~~~g~-~~~ivS~~~~~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp~~~~~~~~~~~K~~~ 157 (265)
+|+.+++.|. .+.|+|.+...+++.+++++|+.+.|..|++|...+|++|.+.+.||+. +++|..||.+.||+.+
T Consensus 92 lik~~ak~g~~eliIVSDaNsfFIe~~Lea~~~~d~F~~IfTNPa~~da~G~L~v~pyH~----~hsC~~CPsNmCKg~V 167 (256)
T KOG3120|consen 92 LIKSAAKLGCFELIIVSDANSFFIEEILEAAGIHDLFSEIFTNPACVDASGRLLVRPYHT----QHSCNLCPSNMCKGLV 167 (256)
T ss_pred HHHHHHhCCCceEEEEecCchhHHHHHHHHccHHHHHHHHhcCCcccCCCCcEEeecCCC----CCccCcCchhhhhhHH
Confidence 9999999985 9999999999999999999999999999999999999999999999994 7999999999999999
Q ss_pred HHHHHHhc---CCCCceEEEEcCCCCCcccccCCCCCCeeeecCCCchhhhhhcCCCeeeEEEEeCCCHHHHHHHHHHHH
Q 044617 158 LDHVCTSF---GCGKQRFIYLGDGRGDFCPTLKLRDCDFVMPRKNYPLWDRICSNPMLIKAKVHEWSSAEELKKILLHLI 234 (265)
Q Consensus 158 i~~~~~~~---gi~~~~~v~vGD~~~Di~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~l~~~~ 234 (265)
+.++.... |+..++++|+|||.||+++..+++..++++.+-||+++++...+|....+.+..|.+-.|+..+|.+++
T Consensus 168 l~~~~~s~~~~gv~yer~iYvGDG~nD~CP~l~Lr~~D~ampRkgfpl~k~~~~~p~~~kasV~~W~sg~d~~~~L~~li 247 (256)
T KOG3120|consen 168 LDELVASQLKDGVRYERLIYVGDGANDFCPVLRLRACDVAMPRKGFPLWKLISANPMLLKASVLEWSSGEDLERILQQLI 247 (256)
T ss_pred HHHHHHHHhhcCCceeeEEEEcCCCCCcCcchhcccCceecccCCCchHhhhhcCcceeeeeEEecccHHHHHHHHHHHH
Confidence 99887664 688899999999999999999999999999999999999888888888899999999999999999999
Q ss_pred Hhhccccc
Q 044617 235 GAISIKED 242 (265)
Q Consensus 235 ~~~~~~~~ 242 (265)
+.+..+|+
T Consensus 248 k~~~~~~d 255 (256)
T KOG3120|consen 248 KTIQVEED 255 (256)
T ss_pred HHhhhccC
Confidence 99888775
No 2
>PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 []. It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity
Probab=100.00 E-value=3.4e-35 Score=237.75 Aligned_cols=225 Identities=52% Similarity=0.940 Sum_probs=207.0
Q ss_pred EEEEecCCCCCCCCchHHHHHHhCchHHHHHHH---ccCChhHHHHHHHHHHHhCCCCHHHHHHHhcCCCCChhHHHHHH
Q 044617 5 VVVFDFDRTLIDDDSDNWVVTQMGLTHLFNQLR---STLPWNSLMDRMMKELHSQGKTVEDIANCLRQCPLDSHVAAAIK 81 (265)
Q Consensus 5 ~iifD~DGTL~ds~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~e~l~ 81 (265)
+|+||||+||+|.+++.++.+.++.+....++. ....|..+++..++.++..|.+.+++.+.+..+++.||+.++++
T Consensus 2 LvvfDFD~TIvd~dsd~~v~~~l~~~~~~~~l~~~~~~~~wt~~m~~vl~~L~~~gvt~~~I~~~l~~ip~~pgm~~~l~ 81 (234)
T PF06888_consen 2 LVVFDFDHTIVDQDSDDWVIELLPPEELPEELRESYPKGGWTEYMDRVLQLLHEQGVTPEDIRDALRSIPIDPGMKELLR 81 (234)
T ss_pred EEEEeCCCCccCCccHHHHHHhcCCcccHHHHHHhccccchHHHHHHHHHHHHHcCCCHHHHHHHHHcCCCCccHHHHHH
Confidence 689999999999999999999998775544433 44579999999999999999999999999999999999999999
Q ss_pred HH--HHcCCcEEEEeCCCHHHHHHHHHhcCcccccceEEecCceecCCCceEEeeccccccCCCcccccCCCCchHHHHH
Q 044617 82 SA--HSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRILPYHDSTLSHHGCNLCPSNLCKGFVLD 159 (265)
Q Consensus 82 ~l--~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp~~~~~~~~~~~K~~~i~ 159 (265)
.+ ++.|+.++|+|++...+++.++++.|+...|+.|++|...++++|.+.+.||+. ++|..|+.|.||..+++
T Consensus 82 ~l~~~~~~~~~~IiSDaNs~fI~~iL~~~gl~~~f~~I~TNpa~~~~~G~l~v~pyh~-----h~C~~C~~NmCK~~il~ 156 (234)
T PF06888_consen 82 FLAKNQRGFDLIIISDANSFFIETILEHHGLRDCFSEIFTNPACFDADGRLRVRPYHS-----HGCSLCPPNMCKGKILE 156 (234)
T ss_pred HHHhcCCCceEEEEeCCcHhHHHHHHHhCCCccccceEEeCCceecCCceEEEeCccC-----CCCCcCCCccchHHHHH
Confidence 99 557999999999999999999999999999999999999999999999888884 77899999999999999
Q ss_pred HHHHhc---CCCCceEEEEcCCCCCcccccCCCCCCeeeecCCCchhhhhhcCCCeeeEEEEeCCCHHHHHHHHHHHH
Q 044617 160 HVCTSF---GCGKQRFIYLGDGRGDFCPTLKLRDCDFVMPRKNYPLWDRICSNPMLIKAKVHEWSSAEELKKILLHLI 234 (265)
Q Consensus 160 ~~~~~~---gi~~~~~v~vGD~~~Di~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~l~~~~ 234 (265)
++++.. |+..++++|||||.||+.++++++..++++++.||+.++++.+++....+.+..|++..||.+.|++++
T Consensus 157 ~~~~~~~~~g~~~~rviYiGDG~nD~Cp~~~L~~~D~v~~R~~~~l~~~i~~~~~~~~a~v~~W~~g~~i~~~l~~~i 234 (234)
T PF06888_consen 157 RLLQEQAQRGVPYDRVIYIGDGRNDFCPALRLRPRDVVFPRKGYPLHKLIQKNPGEVKAEVVPWSSGEEILEILLQLI 234 (234)
T ss_pred HHHHHHhhcCCCcceEEEECCCCCCcCcccccCCCCEEecCCCChHHHHHhcCCCcceeEEEecCCHHHHHHHHHhhC
Confidence 999884 678899999999999999999999999999999999999999887778899999999999999998874
No 3
>COG0546 Gph Predicted phosphatases [General function prediction only]
Probab=99.93 E-value=6e-25 Score=179.50 Aligned_cols=201 Identities=20% Similarity=0.269 Sum_probs=135.4
Q ss_pred CCceEEEEecCCCCCCCCch-----HHHHHHhCchHH-HHHHHc--cCChhHHHHHHHHHHH-hCC-----CCHHHHHHH
Q 044617 1 MADVVVVFDFDRTLIDDDSD-----NWVVTQMGLTHL-FNQLRS--TLPWNSLMDRMMKELH-SQG-----KTVEDIANC 66 (265)
Q Consensus 1 M~~k~iifD~DGTL~ds~~~-----~~~~~~~~~~~~-~~~~~~--~~~~~~~~~~~~~~~~-~~~-----~~~~~~~~~ 66 (265)
|+++.|+||+||||+|+... ..+++.++.+.. ...+.. ..+............. ... ...+.+...
T Consensus 2 ~~~~~iiFDlDGTL~Ds~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (220)
T COG0546 2 MMIKAILFDLDGTLVDSAEDILRAFNAALAELGLPPLDEEEIRQLIGLGLDELIERLLGEADEEAAAELVERLREEFLTA 81 (220)
T ss_pred CCCCEEEEeCCCccccChHHHHHHHHHHHHHcCCCCCCHHHHHHHhcCCHHHHHHHHhccccchhHHHHHHHHHHHHHHH
Confidence 56899999999999999753 566777777632 111111 0111111111100000 000 000111111
Q ss_pred h-c--CCCCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCcccccceEEecCceecCCCceEEeeccccccCCC
Q 044617 67 L-R--QCPLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRILPYHDSTLSHH 143 (265)
Q Consensus 67 ~-~--~~~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp~ 143 (265)
. . ...++||++++|..|+++|++++|+||+....++..++++|+..+|+.+++.. .....||
T Consensus 82 ~~~~~~~~~~~gv~e~L~~L~~~g~~l~i~T~k~~~~~~~~l~~~gl~~~F~~i~g~~--------------~~~~~KP- 146 (220)
T COG0546 82 YAELLESRLFPGVKELLAALKSAGYKLGIVTNKPERELDILLKALGLADYFDVIVGGD--------------DVPPPKP- 146 (220)
T ss_pred HHhhccCccCCCHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHhCCccccceEEcCC--------------CCCCCCc-
Confidence 1 1 24789999999999999999999999999999999999999999999999831 1112356
Q ss_pred cccccCCCCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccCCCCCCeeeecCCCchhhhhhcCCCeeeEEEEeCCCH
Q 044617 144 GCNLCPSNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRDCDFVMPRKNYPLWDRICSNPMLIKAKVHEWSSA 223 (265)
Q Consensus 144 ~~~~~~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (265)
+|..+..+++++|++|++++||||+.+|+.+|+++| ...+.+.+|+.....+. ...++..+ +++
T Consensus 147 ----------~P~~l~~~~~~~~~~~~~~l~VGDs~~Di~aA~~Ag-~~~v~v~~g~~~~~~l~--~~~~d~vi---~~~ 210 (220)
T COG0546 147 ----------DPEPLLLLLEKLGLDPEEALMVGDSLNDILAAKAAG-VPAVGVTWGYNSREELA--QAGADVVI---DSL 210 (220)
T ss_pred ----------CHHHHHHHHHHhCCChhheEEECCCHHHHHHHHHcC-CCEEEEECCCCCCcchh--hcCCCEEE---CCH
Confidence 899999999999999889999999999999999988 44444456553222222 12345666 999
Q ss_pred HHHHHHHHH
Q 044617 224 EELKKILLH 232 (265)
Q Consensus 224 ~el~~~l~~ 232 (265)
.||...+..
T Consensus 211 ~el~~~l~~ 219 (220)
T COG0546 211 AELLALLAE 219 (220)
T ss_pred HHHHHHHhc
Confidence 999887753
No 4
>TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact.
Probab=99.93 E-value=9.9e-24 Score=168.08 Aligned_cols=183 Identities=37% Similarity=0.655 Sum_probs=143.5
Q ss_pred eEEEEecCCCCCCCCchHHHHHHhCchH---HHHHHHccCChhHHHHHHHHHHHhCCCCHHHHHHHhcCCCCChhHHHHH
Q 044617 4 VVVVFDFDRTLIDDDSDNWVVTQMGLTH---LFNQLRSTLPWNSLMDRMMKELHSQGKTVEDIANCLRQCPLDSHVAAAI 80 (265)
Q Consensus 4 k~iifD~DGTL~ds~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~e~l 80 (265)
-+|+|||||||++.+....+.+.++.+. ..........|......+...+...+...+.+...+...+++||+.++|
T Consensus 2 ~~iiFD~dgTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~ll 81 (188)
T TIGR01489 2 VVVVSDFDGTITLNDSDDWITDKFGPPEANRLLDGVLSKTLSIKFMDRRMKGLLPSGLKEDEILEVLKSAPIDPGFKEFI 81 (188)
T ss_pred eEEEEeCCCcccCCCchHHHHHhcCcchhhHHHHHHhhcCCchHHHHHHHHHHhhcCCCHHHHHHHHHhCCCCccHHHHH
Confidence 4789999999999998877777776332 2222333334555555554445555667777877777889999999999
Q ss_pred HHHHHcCCcEEEEeCCCHHHHHHHHHhcCcccccceEEecCceecCCCceEEeeccccccCCCcccccCCCCchHHHHHH
Q 044617 81 KSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRILPYHDSTLSHHGCNLCPSNLCKGFVLDH 160 (265)
Q Consensus 81 ~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp~~~~~~~~~~~K~~~i~~ 160 (265)
+.|+++|++++|+||+....++..++++++..+|+.+++++..++++|...+.+.. ++.|..++.|.+|+..+++
T Consensus 82 ~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~~g~~~~~~~~-----~~~~~~~~~g~~K~~~~~~ 156 (188)
T TIGR01489 82 AFIKEHGIDFIVISDGNDFFIDPVLEGIGEKDVFIEIYSNPASFDNDGRHIVWPHH-----CHGCCSCPCGCCKGKVIHK 156 (188)
T ss_pred HHHHHcCCcEEEEeCCcHHHHHHHHHHcCChhheeEEeccCceECCCCcEEEecCC-----CCccCcCCCCCCHHHHHHH
Confidence 99999999999999999999999999999999999999998888877776654433 2233334567789999999
Q ss_pred HHHhcCCCCceEEEEcCCCCCcccccCCCCCCeeeec
Q 044617 161 VCTSFGCGKQRFIYLGDGRGDFCPTLKLRDCDFVMPR 197 (265)
Q Consensus 161 ~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~~~~~~~~ 197 (265)
+.+++ +++++||||+.+|+++|+ .++++|++
T Consensus 157 ~~~~~---~~~~i~iGD~~~D~~aa~---~~d~~~ar 187 (188)
T TIGR01489 157 LSEPK---YQHIIYIGDGVTDVCPAK---LSDVVFAK 187 (188)
T ss_pred HHhhc---CceEEEECCCcchhchHh---cCCccccC
Confidence 98875 689999999999999995 46888876
No 5
>PRK13288 pyrophosphatase PpaX; Provisional
Probab=99.92 E-value=1.1e-24 Score=177.40 Aligned_cols=200 Identities=13% Similarity=0.047 Sum_probs=131.6
Q ss_pred CCceEEEEecCCCCCCCCch-----HHHHHHhCchH-HHHHHHccC--ChhHHHHHHHHHHHhC--CCCHHHHHH-HhcC
Q 044617 1 MADVVVVFDFDRTLIDDDSD-----NWVVTQMGLTH-LFNQLRSTL--PWNSLMDRMMKELHSQ--GKTVEDIAN-CLRQ 69 (265)
Q Consensus 1 M~~k~iifD~DGTL~ds~~~-----~~~~~~~~~~~-~~~~~~~~~--~~~~~~~~~~~~~~~~--~~~~~~~~~-~~~~ 69 (265)
|++++|+||+||||+|+... ..++++++... ....+.... ........+....... ......... ....
T Consensus 1 m~~~~viFD~DGTL~ds~~~~~~a~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (214)
T PRK13288 1 MKINTVLFDLDGTLINTNELIISSFLHTLKTYYPNQYKREDVLPFIGPSLHDTFSKIDESKVEEMITTYREFNHEHHDEL 80 (214)
T ss_pred CCccEEEEeCCCcCccCHHHHHHHHHHHHHHhCCCCCCHHHHHHHhCcCHHHHHHhcCHHHHHHHHHHHHHHHHHhhhhh
Confidence 78899999999999999652 44555555431 111111111 1111111100000000 000000011 1124
Q ss_pred CCCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCcccccceEEecCceecCCCceEEeeccccccCCCcccccC
Q 044617 70 CPLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRILPYHDSTLSHHGCNLCP 149 (265)
Q Consensus 70 ~~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp~~~~~~~ 149 (265)
..++||+.++|+.|+++|++++|+||+....+...++.+|+..+|+.+++.+ .....||
T Consensus 81 ~~~~~g~~~~l~~L~~~g~~~~i~S~~~~~~~~~~l~~~gl~~~f~~i~~~~--------------~~~~~Kp------- 139 (214)
T PRK13288 81 VTEYETVYETLKTLKKQGYKLGIVTTKMRDTVEMGLKLTGLDEFFDVVITLD--------------DVEHAKP------- 139 (214)
T ss_pred cccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChhceeEEEecC--------------cCCCCCC-------
Confidence 5789999999999999999999999999999999999999999999998852 1112355
Q ss_pred CCCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccCCCCCCeeeecCCCchhhhhhcCCCeeeEEEEeCCCHHHHHHH
Q 044617 150 SNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRDCDFVMPRKNYPLWDRICSNPMLIKAKVHEWSSAEELKKI 229 (265)
Q Consensus 150 ~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~ 229 (265)
++..+.+++++++++++++++|||+.+|+.+|+++|...+++ .+++.....+.+ ..++..+ +++.||.++
T Consensus 140 ----~p~~~~~~~~~~~~~~~~~~~iGDs~~Di~aa~~aG~~~i~v-~~g~~~~~~l~~--~~~~~~i---~~~~~l~~~ 209 (214)
T PRK13288 140 ----DPEPVLKALELLGAKPEEALMVGDNHHDILAGKNAGTKTAGV-AWTIKGREYLEQ--YKPDFML---DKMSDLLAI 209 (214)
T ss_pred ----CcHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCeEEEE-cCCCCCHHHHhh--cCcCEEE---CCHHHHHHH
Confidence 899999999999999999999999999999999988765554 444432222221 1234445 899998876
Q ss_pred HH
Q 044617 230 LL 231 (265)
Q Consensus 230 l~ 231 (265)
+.
T Consensus 210 i~ 211 (214)
T PRK13288 210 VG 211 (214)
T ss_pred Hh
Confidence 64
No 6
>PLN03243 haloacid dehalogenase-like hydrolase; Provisional
Probab=99.92 E-value=5.7e-24 Score=177.31 Aligned_cols=203 Identities=12% Similarity=0.071 Sum_probs=143.6
Q ss_pred ceEEEEecCCCCCCCCc-h-----HHHHHHhCchHHHHHHHc---cCChhHHHHHHHHHHHhCCCCHH---H----HHHH
Q 044617 3 DVVVVFDFDRTLIDDDS-D-----NWVVTQMGLTHLFNQLRS---TLPWNSLMDRMMKELHSQGKTVE---D----IANC 66 (265)
Q Consensus 3 ~k~iifD~DGTL~ds~~-~-----~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~---~----~~~~ 66 (265)
.++|+|||||||+||.. . ..+++++|++....+... ..........+.. .....+ . ....
T Consensus 24 ~k~vIFDlDGTLvDS~~~~~~~a~~~~~~~~G~~~~~~e~~~~~~G~~~~~~~~~l~~----~~~~~~~~~~l~~~~~~~ 99 (260)
T PLN03243 24 WLGVVLEWEGVIVEDDSELERKAWRALAEEEGKRPPPAFLLKRAEGMKNEQAISEVLC----WSRDFLQMKRLAIRKEDL 99 (260)
T ss_pred ceEEEEeCCCceeCCchHHHHHHHHHHHHHcCCCCCHHHHHHHhcCCCHHHHHHHHhc----cCCCHHHHHHHHHHHHHH
Confidence 68999999999999953 2 455666676532222221 1122222211110 001110 0 1111
Q ss_pred ----h-cCCCCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCcccccceEEecCceecCCCceEEeeccccccC
Q 044617 67 ----L-RQCPLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRILPYHDSTLS 141 (265)
Q Consensus 67 ----~-~~~~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~~k 141 (265)
. ....++||+.++|+.|+++|++++|+||+....+...++++|+..+|+.+++.+ .....|
T Consensus 100 ~~~~~~~~~~l~pg~~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~~Fd~ii~~~--------------d~~~~K 165 (260)
T PLN03243 100 YEYMQGGLYRLRPGSREFVQALKKHEIPIAVASTRPRRYLERAIEAVGMEGFFSVVLAAE--------------DVYRGK 165 (260)
T ss_pred HHHHHccCcccCCCHHHHHHHHHHCCCEEEEEeCcCHHHHHHHHHHcCCHhhCcEEEecc--------------cCCCCC
Confidence 1 246789999999999999999999999999999999999999999999999852 111235
Q ss_pred CCcccccCCCCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccCCCCCCeeeecCCCchhhhhhcCCCeeeEEEEeCC
Q 044617 142 HHGCNLCPSNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRDCDFVMPRKNYPLWDRICSNPMLIKAKVHEWS 221 (265)
Q Consensus 142 p~~~~~~~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (265)
| +|.++..+++++|+.+++++||||+.+|+.+|+++|+..+++.+ +.....+. .++..+ +
T Consensus 166 P-----------~Pe~~~~a~~~l~~~p~~~l~IgDs~~Di~aA~~aG~~~i~v~g--~~~~~~l~----~ad~vi---~ 225 (260)
T PLN03243 166 P-----------DPEMFMYAAERLGFIPERCIVFGNSNSSVEAAHDGCMKCVAVAG--KHPVYELS----AGDLVV---R 225 (260)
T ss_pred C-----------CHHHHHHHHHHhCCChHHeEEEcCCHHHHHHHHHcCCEEEEEec--CCchhhhc----cCCEEe---C
Confidence 6 89999999999999999999999999999999998887666652 22222121 234445 9
Q ss_pred CHHHHHHHHHHHHHhhcccccc
Q 044617 222 SAEELKKILLHLIGAISIKEDV 243 (265)
Q Consensus 222 ~~~el~~~l~~~~~~~~~~~~~ 243 (265)
++.||......-+.++..+|-+
T Consensus 226 ~~~el~~~~~~~~~~~~~~~~~ 247 (260)
T PLN03243 226 RLDDLSVVDLKNLSDLDSPEFQ 247 (260)
T ss_pred CHHHHHHHHHhhhhccCCcccc
Confidence 9999999888888888877765
No 7
>TIGR03351 PhnX-like phosphonatase-like hydrolase. This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the
Probab=99.92 E-value=8e-24 Score=172.97 Aligned_cols=194 Identities=14% Similarity=0.109 Sum_probs=132.1
Q ss_pred ceEEEEecCCCCCCCCch-----HHHHHHhCchHHHHHHHc---cCChhHHHHHHHHHHHhCCCCHHH-------HH---
Q 044617 3 DVVVVFDFDRTLIDDDSD-----NWVVTQMGLTHLFNQLRS---TLPWNSLMDRMMKELHSQGKTVED-------IA--- 64 (265)
Q Consensus 3 ~k~iifD~DGTL~ds~~~-----~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~-------~~--- 64 (265)
+++|+|||||||+|+... ..+++++|.+....+... ..........+. ...+...+. +.
T Consensus 1 ~k~iiFD~DGTL~ds~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~ 77 (220)
T TIGR03351 1 ISLVVLDMAGTTVDEDGLVYRALRQAVTAAGLSPTPEEVQSAWMGQSKIEAIRALL---ALDGADEAEAQAAFADFEERL 77 (220)
T ss_pred CcEEEEecCCCeeccCchHHHHHHHHHHHcCCCCCHHHHHHhhcCCCHHHHHHHHH---hccCCCHHHHHHHHHHHHHHH
Confidence 478999999999999763 445666666532222222 111222222211 111222111 11
Q ss_pred -HHh--cCCCCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCcc--cccceEEecCceecCCCceEEeeccccc
Q 044617 65 -NCL--RQCPLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLL--GCFSEIYTNPTYVDEQGRLRILPYHDST 139 (265)
Q Consensus 65 -~~~--~~~~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~--~~f~~i~~~~~~~d~~~~~~~~~~~~~~ 139 (265)
..+ ....++||+.++|++|+++|++++|+||+....+...++.+|+. .+|+.+++.. ....
T Consensus 78 ~~~~~~~~~~l~~G~~~~L~~L~~~g~~~~ivT~~~~~~~~~~l~~~~l~~~~~f~~i~~~~--------------~~~~ 143 (220)
T TIGR03351 78 AEAYDDGPPVALPGAEEAFRSLRSSGIKVALTTGFDRDTAERLLEKLGWTVGDDVDAVVCPS--------------DVAA 143 (220)
T ss_pred HHHhcccCCccCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHhhhhhhccCCEEEcCC--------------cCCC
Confidence 111 13579999999999999999999999999999999999999998 8999988852 1112
Q ss_pred cCCCcccccCCCCchHHHHHHHHHhcCCC-CceEEEEcCCCCCcccccCCCCCC-eeeecCCCchhhhhhcCCCeeeEEE
Q 044617 140 LSHHGCNLCPSNLCKGFVLDHVCTSFGCG-KQRFIYLGDGRGDFCPTLKLRDCD-FVMPRKNYPLWDRICSNPMLIKAKV 217 (265)
Q Consensus 140 ~kp~~~~~~~~~~~K~~~i~~~~~~~gi~-~~~~v~vGD~~~Di~~a~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (265)
.|| +|.++.++++++|+. |+++++|||+.+|+.+|+++|+.. +++. +|+.....+... .++..+
T Consensus 144 ~KP-----------~p~~~~~a~~~~~~~~~~~~~~igD~~~Di~aa~~aG~~~~i~~~-~g~~~~~~~~~~--~~~~~i 209 (220)
T TIGR03351 144 GRP-----------APDLILRAMELTGVQDVQSVAVAGDTPNDLEAGINAGAGAVVGVL-TGAHDAEELSRH--PHTHVL 209 (220)
T ss_pred CCC-----------CHHHHHHHHHHcCCCChhHeEEeCCCHHHHHHHHHCCCCeEEEEe-cCCCcHHHHhhc--CCceee
Confidence 356 899999999999997 799999999999999999988877 4444 444333323211 233445
Q ss_pred EeCCCHHHHHHHH
Q 044617 218 HEWSSAEELKKIL 230 (265)
Q Consensus 218 ~~~~~~~el~~~l 230 (265)
+++.||..++
T Consensus 210 ---~~~~~l~~~~ 219 (220)
T TIGR03351 210 ---DSVADLPALL 219 (220)
T ss_pred ---cCHHHHHHhh
Confidence 8888887653
No 8
>PLN02954 phosphoserine phosphatase
Probab=99.92 E-value=2.5e-23 Score=170.47 Aligned_cols=207 Identities=15% Similarity=0.237 Sum_probs=137.0
Q ss_pred CCceEEEEecCCCCCCCCchHHHHHHhCchHHHHHHHcc-----CChhHHHHHHHHHHHhCCCCHHHHHHHhcC--CCCC
Q 044617 1 MADVVVVFDFDRTLIDDDSDNWVVTQMGLTHLFNQLRST-----LPWNSLMDRMMKELHSQGKTVEDIANCLRQ--CPLD 73 (265)
Q Consensus 1 M~~k~iifD~DGTL~ds~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~ 73 (265)
|++|+|+|||||||++++....+++.+|.+....+.... ..+...+... +.......+.+...+.. ..++
T Consensus 10 ~~~k~viFDfDGTL~~~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~l~ 86 (224)
T PLN02954 10 RSADAVCFDVDSTVCVDEGIDELAEFCGAGEAVAEWTAKAMGGSVPFEEALAAR---LSLFKPSLSQVEEFLEKRPPRLS 86 (224)
T ss_pred ccCCEEEEeCCCcccchHHHHHHHHHcCChHHHHHHHHHHHCCCCCHHHHHHHH---HHHcCCCHHHHHHHHHHccCCCC
Confidence 467999999999999999989999999986544433321 2333322222 22222334444444433 5689
Q ss_pred hhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCcccccceEEecCceecCCCceEEeeccccccCCCcccccCCCCc
Q 044617 74 SHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRILPYHDSTLSHHGCNLCPSNLC 153 (265)
Q Consensus 74 ~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp~~~~~~~~~~~ 153 (265)
||+.++|+.|+++|++++|+|++....+..+++.+|+... .++++...++.+|.+....... + ...+.+
T Consensus 87 pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~~l~~~gi~~~--~~~~~~~~~~~~g~~~g~~~~~----~-----~~~~~~ 155 (224)
T PLN02954 87 PGIPELVKKLRARGTDVYLVSGGFRQMIAPVAAILGIPPE--NIFANQILFGDSGEYAGFDENE----P-----TSRSGG 155 (224)
T ss_pred ccHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHhCCChh--hEEEeEEEEcCCCcEECccCCC----c-----ccCCcc
Confidence 9999999999999999999999999999999999998631 2344333344334333211100 0 011334
Q ss_pred hHHHHHHHHHhcCCCCceEEEEcCCCCCcccccCCCCCCeeeecCCCchhhhhhcCCCeeeEEEEeCCCHHHHHHHH
Q 044617 154 KGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRDCDFVMPRKNYPLWDRICSNPMLIKAKVHEWSSAEELKKIL 230 (265)
Q Consensus 154 K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~l 230 (265)
|+..++.+++++|. ++++||||+.+|+.+|++ ++.+++++.+++........ .++..+ +++.||.+++
T Consensus 156 K~~~i~~~~~~~~~--~~~i~iGDs~~Di~aa~~-~~~~~~~~~~~~~~~~~~~~---~~~~~i---~~~~el~~~~ 223 (224)
T PLN02954 156 KAEAVQHIKKKHGY--KTMVMIGDGATDLEARKP-GGADLFIGYGGVQVREAVAA---KADWFV---TDFQDLIEVL 223 (224)
T ss_pred HHHHHHHHHHHcCC--CceEEEeCCHHHHHhhhc-CCCCEEEecCCCccCHHHHh---cCCEEE---CCHHHHHHhh
Confidence 99999999998875 689999999999999766 55666666544332222221 234555 8898887754
No 9
>PRK13226 phosphoglycolate phosphatase; Provisional
Probab=99.92 E-value=3.9e-24 Score=175.81 Aligned_cols=195 Identities=15% Similarity=0.150 Sum_probs=130.8
Q ss_pred CceEEEEecCCCCCCCCch-----HHHHHHhCchHHHHHHHccC---ChhHHHHHHHHHHHhCCC-CH----HHHH----
Q 044617 2 ADVVVVFDFDRTLIDDDSD-----NWVVTQMGLTHLFNQLRSTL---PWNSLMDRMMKELHSQGK-TV----EDIA---- 64 (265)
Q Consensus 2 ~~k~iifD~DGTL~ds~~~-----~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~-~~----~~~~---- 64 (265)
|+++|+|||||||+|+... ..++.++|.+....+.+... +......... ..... .. +.+.
T Consensus 11 ~~k~viFD~DGTL~Ds~~~~~~a~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~ 87 (229)
T PRK13226 11 FPRAVLFDLDGTLLDSAPDMLATVNAMLAARGRAPITLAQLRPVVSKGARAMLAVAF---PELDAAARDALIPEFLQRYE 87 (229)
T ss_pred cCCEEEEcCcCccccCHHHHHHHHHHHHHHCCCCCCCHHHHHHHhhhHHHHHHHHHh---ccCChHHHHHHHHHHHHHHH
Confidence 3589999999999999642 55666666642211111111 1111111100 00000 00 1111
Q ss_pred HH-hcCCCCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCcccccceEEecCceecCCCceEEeeccccccCCC
Q 044617 65 NC-LRQCPLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRILPYHDSTLSHH 143 (265)
Q Consensus 65 ~~-~~~~~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp~ 143 (265)
.. .....++||+.++|++|+++|++++|+||+....+...++.+|+..+|+.+++.+ .....||
T Consensus 88 ~~~~~~~~~~pg~~~~L~~L~~~g~~l~i~Tn~~~~~~~~~l~~~~l~~~f~~i~~~~--------------~~~~~KP- 152 (229)
T PRK13226 88 ALIGTQSQLFDGVEGMLQRLECAGCVWGIVTNKPEYLARLILPQLGWEQRCAVLIGGD--------------TLAERKP- 152 (229)
T ss_pred HhhhhcCeeCCCHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCchhcccEEEecC--------------cCCCCCC-
Confidence 11 1246789999999999999999999999999999999999999999998877741 1112356
Q ss_pred cccccCCCCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccCCCCCCeeeecCCCchh-hhhhcCCCeeeEEEEeCCC
Q 044617 144 GCNLCPSNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRDCDFVMPRKNYPLW-DRICSNPMLIKAKVHEWSS 222 (265)
Q Consensus 144 ~~~~~~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 222 (265)
+|..+.++++++|++|+++++|||+.+|+.+|+++|...+++. +|+... ..... ..++..+ ++
T Consensus 153 ----------~p~~~~~~~~~l~~~p~~~l~IGDs~~Di~aA~~aG~~~i~v~-~g~~~~~~~~~~--~~~~~~i---~~ 216 (229)
T PRK13226 153 ----------HPLPLLVAAERIGVAPTDCVYVGDDERDILAARAAGMPSVAAL-WGYRLHDDDPLA--WQADVLV---EQ 216 (229)
T ss_pred ----------CHHHHHHHHHHhCCChhhEEEeCCCHHHHHHHHHCCCcEEEEe-ecCCCCCcChhh--cCCCeee---CC
Confidence 8999999999999999999999999999999999888766654 444321 11111 1234555 99
Q ss_pred HHHHHHHH
Q 044617 223 AEELKKIL 230 (265)
Q Consensus 223 ~~el~~~l 230 (265)
+.||.+.+
T Consensus 217 ~~el~~~~ 224 (229)
T PRK13226 217 PQLLWNPA 224 (229)
T ss_pred HHHHHHHh
Confidence 99998765
No 10
>PRK13478 phosphonoacetaldehyde hydrolase; Provisional
Probab=99.91 E-value=5.5e-23 Score=172.84 Aligned_cols=139 Identities=7% Similarity=0.005 Sum_probs=107.1
Q ss_pred CCCCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCccccc-ceEEecCceecCCCceEEeeccccccCCCcccc
Q 044617 69 QCPLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCF-SEIYTNPTYVDEQGRLRILPYHDSTLSHHGCNL 147 (265)
Q Consensus 69 ~~~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f-~~i~~~~~~~d~~~~~~~~~~~~~~~kp~~~~~ 147 (265)
...++||+.++|+.|+++|++++|+||+....+..+++.+++..+| +.+++.+ .....||
T Consensus 99 ~~~~~pg~~elL~~L~~~g~~l~I~T~~~~~~~~~~l~~~~l~~~~~d~i~~~~--------------~~~~~KP----- 159 (267)
T PRK13478 99 YATPIPGVLEVIAALRARGIKIGSTTGYTREMMDVVVPLAAAQGYRPDHVVTTD--------------DVPAGRP----- 159 (267)
T ss_pred cCCCCCCHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHHhhcCCCceEEEcCC--------------cCCCCCC-----
Confidence 4678999999999999999999999999999999999998887774 6777641 1122356
Q ss_pred cCCCCchHHHHHHHHHhcCCC-CceEEEEcCCCCCcccccCCCCCCeeeecCCCch-----------------------h
Q 044617 148 CPSNLCKGFVLDHVCTSFGCG-KQRFIYLGDGRGDFCPTLKLRDCDFVMPRKNYPL-----------------------W 203 (265)
Q Consensus 148 ~~~~~~K~~~i~~~~~~~gi~-~~~~v~vGD~~~Di~~a~~~~~~~~~~~~~~~~~-----------------------~ 203 (265)
+|..+..+++++|+. +++++||||+.+|+.+|+++|...+++.. |+.. .
T Consensus 160 ------~p~~~~~a~~~l~~~~~~e~l~IGDs~~Di~aA~~aG~~~i~v~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (267)
T PRK13478 160 ------YPWMALKNAIELGVYDVAACVKVDDTVPGIEEGLNAGMWTVGVIL-SGNELGLSEEEYQALSAAELAARRERAR 232 (267)
T ss_pred ------ChHHHHHHHHHcCCCCCcceEEEcCcHHHHHHHHHCCCEEEEEcc-CcccccCCHHHHHhcCHHHHHHHHHHHH
Confidence 899999999999986 69999999999999999998887666654 4431 1
Q ss_pred hhhhcCCCeeeEEEEeCCCHHHHHHHHHHHHHhhc
Q 044617 204 DRICSNPMLIKAKVHEWSSAEELKKILLHLIGAIS 238 (265)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~el~~~l~~~~~~~~ 238 (265)
..+.+. .++..+ +++.||.++|..+..+..
T Consensus 233 ~~l~~~--~a~~vi---~~~~~l~~~l~~~~~~~~ 262 (267)
T PRK13478 233 ARLRAA--GAHYVI---DTIADLPAVIADIEARLA 262 (267)
T ss_pred HHHHHc--CCCeeh---hhHHHHHHHHHHHHHHHh
Confidence 222221 234445 899999988876665543
No 11
>PRK13225 phosphoglycolate phosphatase; Provisional
Probab=99.91 E-value=9.9e-24 Score=176.99 Aligned_cols=195 Identities=19% Similarity=0.285 Sum_probs=134.1
Q ss_pred CceEEEEecCCCCCCCCch-----HHHHHHhCchHHHHHHHcc-CChhHHHHHHHHHHHhCCCC-----------HHHHH
Q 044617 2 ADVVVVFDFDRTLIDDDSD-----NWVVTQMGLTHLFNQLRST-LPWNSLMDRMMKELHSQGKT-----------VEDIA 64 (265)
Q Consensus 2 ~~k~iifD~DGTL~ds~~~-----~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-----------~~~~~ 64 (265)
++++|+|||||||+||... ..+++.+|.+....+.+.. .++. .......+ +.. .+.+.
T Consensus 61 ~~k~vIFDlDGTLiDS~~~~~~a~~~~~~~~G~~~~~~~~~~~~~g~~--~~~i~~~~---~~~~~~~~~~~~~~~~~~~ 135 (273)
T PRK13225 61 TLQAIIFDFDGTLVDSLPTVVAIANAHAPDFGYDPIDERDYAQLRQWS--SRTIVRRA---GLSPWQQARLLQRVQRQLG 135 (273)
T ss_pred hcCEEEECCcCccccCHHHHHHHHHHHHHHCCCCCCCHHHHHHHhCcc--HHHHHHHc---CCCHHHHHHHHHHHHHHHH
Confidence 3689999999999999642 5566666664221111111 1110 00000100 111 01112
Q ss_pred HHhcCCCCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCcccccceEEecCceecCCCceEEeeccccccCCCc
Q 044617 65 NCLRQCPLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRILPYHDSTLSHHG 144 (265)
Q Consensus 65 ~~~~~~~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp~~ 144 (265)
.......++||+.++|+.|+++|++++|+||+....+...++++|+.++|+.+++.. +.
T Consensus 136 ~~~~~~~l~pg~~e~L~~L~~~gi~laIvSn~~~~~~~~~L~~~gl~~~F~~vi~~~------------~~--------- 194 (273)
T PRK13225 136 DCLPALQLFPGVADLLAQLRSRSLCLGILSSNSRQNIEAFLQRQGLRSLFSVVQAGT------------PI--------- 194 (273)
T ss_pred hhcccCCcCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChhheEEEEecC------------CC---------
Confidence 223456889999999999999999999999999999999999999999998877631 01
Q ss_pred ccccCCCCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccCCCCCCeeeecCCCchhhhhhcCCCeeeEEEEeCCCHH
Q 044617 145 CNLCPSNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRDCDFVMPRKNYPLWDRICSNPMLIKAKVHEWSSAE 224 (265)
Q Consensus 145 ~~~~~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (265)
..|+..+..++++++++|+++++|||+.+|+.+|+++|...+++. +|+.....+... .++..+ +++.
T Consensus 195 -------~~k~~~~~~~l~~~~~~p~~~l~IGDs~~Di~aA~~AG~~~I~v~-~g~~~~~~l~~~--~ad~~i---~~~~ 261 (273)
T PRK13225 195 -------LSKRRALSQLVAREGWQPAAVMYVGDETRDVEAARQVGLIAVAVT-WGFNDRQSLVAA--CPDWLL---ETPS 261 (273)
T ss_pred -------CCCHHHHHHHHHHhCcChhHEEEECCCHHHHHHHHHCCCeEEEEe-cCCCCHHHHHHC--CCCEEE---CCHH
Confidence 126788999999999999999999999999999999887665554 444433222211 234555 9999
Q ss_pred HHHHHHHHHHH
Q 044617 225 ELKKILLHLIG 235 (265)
Q Consensus 225 el~~~l~~~~~ 235 (265)
||..++.+++.
T Consensus 262 eL~~~~~~~~~ 272 (273)
T PRK13225 262 DLLQAVTQLMR 272 (273)
T ss_pred HHHHHHHHHhc
Confidence 99998887753
No 12
>PLN02770 haloacid dehalogenase-like hydrolase family protein
Probab=99.91 E-value=2.4e-23 Score=173.12 Aligned_cols=192 Identities=11% Similarity=0.006 Sum_probs=129.0
Q ss_pred CceEEEEecCCCCCCCCch-----HHHHHHhCch----HHHHHHH---ccCChhHHHHHHHHHHHhCCCC-----HHHHH
Q 044617 2 ADVVVVFDFDRTLIDDDSD-----NWVVTQMGLT----HLFNQLR---STLPWNSLMDRMMKELHSQGKT-----VEDIA 64 (265)
Q Consensus 2 ~~k~iifD~DGTL~ds~~~-----~~~~~~~~~~----~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~-----~~~~~ 64 (265)
++++|+|||||||+|+... ..++++++.+ ....... ....+......+.......... ...+.
T Consensus 21 ~~k~viFDlDGTLiDs~~~~~~a~~~~~~~~g~~~g~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~ 100 (248)
T PLN02770 21 PLEAVLFDVDGTLCDSDPLHYYAFREMLQEINFNGGVPITEEFFVENIAGKHNEDIALGLFPDDLERGLKFTDDKEALFR 100 (248)
T ss_pred ccCEEEEcCCCccCcCHHHHHHHHHHHHHHhccccCCCCCHHHHHHHcCCCCHHHHHHHHcCcchhhHHHHHHHHHHHHH
Confidence 3689999999999999752 5556666432 1111111 1112222222111100000000 01111
Q ss_pred HHh-cCCCCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCcccccceEEecCceecCCCceEEeeccccccCCC
Q 044617 65 NCL-RQCPLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRILPYHDSTLSHH 143 (265)
Q Consensus 65 ~~~-~~~~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp~ 143 (265)
... ....++||+.++|++|+++|++++|+||+....+...++++|+.++|+.+++.+ .....||
T Consensus 101 ~~~~~~~~l~pgv~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~~Fd~iv~~~--------------~~~~~KP- 165 (248)
T PLN02770 101 KLASEQLKPLNGLYKLKKWIEDRGLKRAAVTNAPRENAELMISLLGLSDFFQAVIIGS--------------ECEHAKP- 165 (248)
T ss_pred HHHHhcCCcCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCChhhCcEEEecC--------------cCCCCCC-
Confidence 211 357889999999999999999999999999999999999999999999988852 1112356
Q ss_pred cccccCCCCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccCCCCCCeeeecCCCchhhhhhcCCCeeeEEEEeCCCH
Q 044617 144 GCNLCPSNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRDCDFVMPRKNYPLWDRICSNPMLIKAKVHEWSSA 223 (265)
Q Consensus 144 ~~~~~~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (265)
+|+.+..+++++|++|+++++|||+.+|+++|+++|...+++. +++....+... .++..+ +++
T Consensus 166 ----------~p~~~~~a~~~~~~~~~~~l~vgDs~~Di~aA~~aGi~~i~v~-~g~~~~~l~~~---~a~~vi---~~~ 228 (248)
T PLN02770 166 ----------HPDPYLKALEVLKVSKDHTFVFEDSVSGIKAGVAAGMPVVGLT-TRNPESLLMEA---KPTFLI---KDY 228 (248)
T ss_pred ----------ChHHHHHHHHHhCCChhHEEEEcCCHHHHHHHHHCCCEEEEEe-CCCCHHHHhhc---CCCEEe---ccc
Confidence 8999999999999999999999999999999999887766554 44443332221 234555 777
Q ss_pred HH
Q 044617 224 EE 225 (265)
Q Consensus 224 ~e 225 (265)
.|
T Consensus 229 ~e 230 (248)
T PLN02770 229 ED 230 (248)
T ss_pred hh
Confidence 77
No 13
>PRK10826 2-deoxyglucose-6-phosphatase; Provisional
Probab=99.90 E-value=7.5e-23 Score=167.48 Aligned_cols=195 Identities=18% Similarity=0.197 Sum_probs=129.9
Q ss_pred CceEEEEecCCCCCCCCch-----HHHHHHhCchHHH-HHHHccCC--hhHHHHHHHHHHHhCCCCHHH--------HH-
Q 044617 2 ADVVVVFDFDRTLIDDDSD-----NWVVTQMGLTHLF-NQLRSTLP--WNSLMDRMMKELHSQGKTVED--------IA- 64 (265)
Q Consensus 2 ~~k~iifD~DGTL~ds~~~-----~~~~~~~~~~~~~-~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~--------~~- 64 (265)
++++|+||+||||+|+... ..++...|.+... ..+....+ .......+.......+...+. +.
T Consensus 6 ~~k~iiFD~DGTL~d~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (222)
T PRK10826 6 QILAAIFDMDGLLIDSEPLWDRAELDVMASLGVDISRREELPDTLGLRIDQVVDLWYARQPWNGPSRQEVVQRIIARVIS 85 (222)
T ss_pred cCcEEEEcCCCCCCcCHHHHHHHHHHHHHHCCCCCCHHHHHHHhhCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHH
Confidence 4789999999999999653 3455666654222 11111111 111111111111101111111 11
Q ss_pred HHhcCCCCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCcccccceEEecCceecCCCceEEeeccccccCCCc
Q 044617 65 NCLRQCPLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRILPYHDSTLSHHG 144 (265)
Q Consensus 65 ~~~~~~~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp~~ 144 (265)
.......++||+.++|+.|+++|++++|+||+....+...++.+++..+|+.+++.+ .....||
T Consensus 86 ~~~~~~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~~~~~~--------------~~~~~Kp-- 149 (222)
T PRK10826 86 LIEETRPLLPGVREALALCKAQGLKIGLASASPLHMLEAVLTMFDLRDYFDALASAE--------------KLPYSKP-- 149 (222)
T ss_pred HHhcCCCCCCCHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHhCcchhcccEEEEcc--------------cCCCCCC--
Confidence 112356899999999999999999999999999999999999999999999988852 1122355
Q ss_pred ccccCCCCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccCCCCCCeeeecCCCchhhhhhcCCCeeeEEEEeCCCHH
Q 044617 145 CNLCPSNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRDCDFVMPRKNYPLWDRICSNPMLIKAKVHEWSSAE 224 (265)
Q Consensus 145 ~~~~~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (265)
++..++.+++++|++|+++++|||+.+|+.+|+++|...+++...... ..... . .++..+ +++.
T Consensus 150 ---------~~~~~~~~~~~~~~~~~~~~~igDs~~Di~aA~~aG~~~i~v~~~~~~-~~~~~--~-~~~~~~---~~~~ 213 (222)
T PRK10826 150 ---------HPEVYLNCAAKLGVDPLTCVALEDSFNGMIAAKAARMRSIVVPAPEQQ-NDPRW--A-LADVKL---ESLT 213 (222)
T ss_pred ---------CHHHHHHHHHHcCCCHHHeEEEcCChhhHHHHHHcCCEEEEecCCccC-chhhh--h-hhheec---cCHH
Confidence 889999999999999999999999999999999988866666544211 11111 1 123444 8888
Q ss_pred HHHH
Q 044617 225 ELKK 228 (265)
Q Consensus 225 el~~ 228 (265)
||..
T Consensus 214 dl~~ 217 (222)
T PRK10826 214 ELTA 217 (222)
T ss_pred HHhh
Confidence 8754
No 14
>TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent.
Probab=99.90 E-value=1.4e-22 Score=169.06 Aligned_cols=106 Identities=9% Similarity=-0.017 Sum_probs=90.9
Q ss_pred CCCCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCccccc-ceEEecCceecCCCceEEeeccccccCCCcccc
Q 044617 69 QCPLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCF-SEIYTNPTYVDEQGRLRILPYHDSTLSHHGCNL 147 (265)
Q Consensus 69 ~~~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f-~~i~~~~~~~d~~~~~~~~~~~~~~~kp~~~~~ 147 (265)
...++||+.++|++|+++|++++|+||+....++.+++++|+..+| +.+++.+ .....||
T Consensus 97 ~~~~~pg~~e~L~~L~~~g~~l~IvT~~~~~~~~~~l~~~gl~~~f~d~ii~~~--------------~~~~~KP----- 157 (253)
T TIGR01422 97 YSSPIPGVIEVIAYLRARGIKIGSTTGYTREMMDVVAPEAALQGYRPDYNVTTD--------------DVPAGRP----- 157 (253)
T ss_pred cCccCCCHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHHHHhcCCCCceEEccc--------------cCCCCCC-----
Confidence 4688999999999999999999999999999999999999999886 7777742 1122356
Q ss_pred cCCCCchHHHHHHHHHhcCCC-CceEEEEcCCCCCcccccCCCCCCeeeecCCC
Q 044617 148 CPSNLCKGFVLDHVCTSFGCG-KQRFIYLGDGRGDFCPTLKLRDCDFVMPRKNY 200 (265)
Q Consensus 148 ~~~~~~K~~~i~~~~~~~gi~-~~~~v~vGD~~~Di~~a~~~~~~~~~~~~~~~ 200 (265)
+|+.+..+++++|+. |+++++|||+.+|+.+|+++|...+++. +|+
T Consensus 158 ------~p~~~~~a~~~l~~~~~~~~l~IGDs~~Di~aA~~aGi~~i~v~-~g~ 204 (253)
T TIGR01422 158 ------APWMALKNAIELGVYDVAACVKVGDTVPDIEEGRNAGMWTVGLI-LSS 204 (253)
T ss_pred ------CHHHHHHHHHHcCCCCchheEEECCcHHHHHHHHHCCCeEEEEe-cCC
Confidence 899999999999995 9999999999999999999888766665 444
No 15
>PRK09449 dUMP phosphatase; Provisional
Probab=99.90 E-value=2e-22 Score=165.11 Aligned_cols=129 Identities=14% Similarity=0.149 Sum_probs=102.5
Q ss_pred CCCCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCcccccceEEecCceecCCCceEEeeccccccCCCccccc
Q 044617 69 QCPLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRILPYHDSTLSHHGCNLC 148 (265)
Q Consensus 69 ~~~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp~~~~~~ 148 (265)
...++||+.++|++|+ +|++++|+||+....+...++++|+..+|+.+++.. .....||
T Consensus 93 ~~~~~~g~~~~L~~L~-~~~~~~i~Tn~~~~~~~~~l~~~~l~~~fd~v~~~~--------------~~~~~KP------ 151 (224)
T PRK09449 93 ICTPLPGAVELLNALR-GKVKMGIITNGFTELQQVRLERTGLRDYFDLLVISE--------------QVGVAKP------ 151 (224)
T ss_pred cCccCccHHHHHHHHH-hCCeEEEEeCCcHHHHHHHHHhCChHHHcCEEEEEC--------------ccCCCCC------
Confidence 4678999999999999 579999999999999999999999999999988751 2223466
Q ss_pred CCCCchHHHHHHHHHhcCCC-CceEEEEcCCC-CCcccccCCCCCCeeeecCCCchhhhhhcCCCeeeEEEEeCCCHHHH
Q 044617 149 PSNLCKGFVLDHVCTSFGCG-KQRFIYLGDGR-GDFCPTLKLRDCDFVMPRKNYPLWDRICSNPMLIKAKVHEWSSAEEL 226 (265)
Q Consensus 149 ~~~~~K~~~i~~~~~~~gi~-~~~~v~vGD~~-~Di~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el 226 (265)
++.++..+++++|+. ++++++|||+. +|+.+|+++|...+++..++..... ...++..+ +++.||
T Consensus 152 -----~p~~~~~~~~~~~~~~~~~~~~vgD~~~~Di~~A~~aG~~~i~~~~~~~~~~~-----~~~~~~~i---~~~~el 218 (224)
T PRK09449 152 -----DVAIFDYALEQMGNPDRSRVLMVGDNLHSDILGGINAGIDTCWLNAHGREQPE-----GIAPTYQV---SSLSEL 218 (224)
T ss_pred -----CHHHHHHHHHHcCCCCcccEEEEcCCcHHHHHHHHHCCCcEEEECCCCCCCCC-----CCCCeEEE---CCHHHH
Confidence 899999999999975 58999999998 7999999989887777654432111 11234455 899999
Q ss_pred HHHHH
Q 044617 227 KKILL 231 (265)
Q Consensus 227 ~~~l~ 231 (265)
.++|+
T Consensus 219 ~~~l~ 223 (224)
T PRK09449 219 EQLLC 223 (224)
T ss_pred HHHHh
Confidence 88764
No 16
>PRK11587 putative phosphatase; Provisional
Probab=99.90 E-value=1.2e-22 Score=165.89 Aligned_cols=165 Identities=13% Similarity=0.052 Sum_probs=115.8
Q ss_pred CCceEEEEecCCCCCCCCch-----HHHHHHhCchHH-HHHHHccCChhHHHHHHHHHHHhCCCCH----HHHH------
Q 044617 1 MADVVVVFDFDRTLIDDDSD-----NWVVTQMGLTHL-FNQLRSTLPWNSLMDRMMKELHSQGKTV----EDIA------ 64 (265)
Q Consensus 1 M~~k~iifD~DGTL~ds~~~-----~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~------ 64 (265)
|++++|+|||||||+|+... ..+++++|.+.. ....+...........+.. +... +.+.
T Consensus 1 M~~k~viFDlDGTL~Ds~~~~~~a~~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~ 75 (218)
T PRK11587 1 MRCKGFLFDLDGTLVDSLPAVERAWSNWADRHGIAPDEVLNFIHGKQAITSLRHFMA-----GASEAEIQAEFTRLEQIE 75 (218)
T ss_pred CCCCEEEEcCCCCcCcCHHHHHHHHHHHHHHcCCCHHHHHHHHcCCCHHHHHHHHhc-----cCCcHHHHHHHHHHHHHH
Confidence 88999999999999999642 566777777532 1111111112111111110 0110 1111
Q ss_pred -HHhcCCCCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCcccccceEEecCceecCCCceEEeeccccccCCC
Q 044617 65 -NCLRQCPLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRILPYHDSTLSHH 143 (265)
Q Consensus 65 -~~~~~~~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp~ 143 (265)
.......++||+.++|+.|+++|++++|+||+....+...++..++ .+|+.+++.+ .....||
T Consensus 76 ~~~~~~~~~~pg~~e~L~~L~~~g~~~~ivTn~~~~~~~~~l~~~~l-~~~~~i~~~~--------------~~~~~KP- 139 (218)
T PRK11587 76 ATDTEGITALPGAIALLNHLNKLGIPWAIVTSGSVPVASARHKAAGL-PAPEVFVTAE--------------RVKRGKP- 139 (218)
T ss_pred HhhhcCceeCcCHHHHHHHHHHcCCcEEEEcCCCchHHHHHHHhcCC-CCccEEEEHH--------------HhcCCCC-
Confidence 1123567899999999999999999999999988888888888888 4566666641 1112356
Q ss_pred cccccCCCCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccCCCCCCeeee
Q 044617 144 GCNLCPSNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRDCDFVMP 196 (265)
Q Consensus 144 ~~~~~~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~~~~~~~ 196 (265)
+|..+..+++++|+.|+++++|||+.+|+++|+++|...+++.
T Consensus 140 ----------~p~~~~~~~~~~g~~p~~~l~igDs~~di~aA~~aG~~~i~v~ 182 (218)
T PRK11587 140 ----------EPDAYLLGAQLLGLAPQECVVVEDAPAGVLSGLAAGCHVIAVN 182 (218)
T ss_pred ----------CcHHHHHHHHHcCCCcccEEEEecchhhhHHHHHCCCEEEEEC
Confidence 8999999999999999999999999999999999888666664
No 17
>TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein. The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity.
Probab=99.90 E-value=5.8e-23 Score=166.14 Aligned_cols=133 Identities=9% Similarity=0.046 Sum_probs=106.0
Q ss_pred cCCCCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCcccccceEEecCceecCCCceEEeeccccccCCCcccc
Q 044617 68 RQCPLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRILPYHDSTLSHHGCNL 147 (265)
Q Consensus 68 ~~~~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp~~~~~ 147 (265)
....++||+.++|++|+++|++++|+||+....+...++++|+.++|+.+++.+ .....||
T Consensus 72 ~~~~~~~g~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~~l~~~f~~i~~~~--------------~~~~~KP----- 132 (205)
T TIGR01454 72 GEVEVFPGVPELLAELRADGVGTAIATGKSGPRARSLLEALGLLPLFDHVIGSD--------------EVPRPKP----- 132 (205)
T ss_pred cccccCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHcCChhheeeEEecC--------------cCCCCCC-----
Confidence 457889999999999999999999999999999999999999999999888752 1112356
Q ss_pred cCCCCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccCCCCCCeeeecCCCchhhhhhcCCCeeeEEEEeCCCHHHHH
Q 044617 148 CPSNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRDCDFVMPRKNYPLWDRICSNPMLIKAKVHEWSSAEELK 227 (265)
Q Consensus 148 ~~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~ 227 (265)
++..+..+++++|+++++++||||+.+|+.+|+++|...+.+ .||+.....+... .++..+ +++.||.
T Consensus 133 ------~~~~~~~~~~~~~~~~~~~l~igD~~~Di~aA~~~Gi~~i~~-~~g~~~~~~l~~~--~~~~~~---~~~~~l~ 200 (205)
T TIGR01454 133 ------APDIVREALRLLDVPPEDAVMVGDAVTDLASARAAGTATVAA-LWGEGDAGELLAA--RPDFLL---RKPQSLL 200 (205)
T ss_pred ------ChHHHHHHHHHcCCChhheEEEcCCHHHHHHHHHcCCeEEEE-EecCCChhhhhhc--CCCeee---CCHHHHH
Confidence 899999999999999999999999999999999988765544 4555443333211 234445 8999987
Q ss_pred HHHH
Q 044617 228 KILL 231 (265)
Q Consensus 228 ~~l~ 231 (265)
.++.
T Consensus 201 ~~~~ 204 (205)
T TIGR01454 201 ALCR 204 (205)
T ss_pred HHhh
Confidence 7653
No 18
>PRK13222 phosphoglycolate phosphatase; Provisional
Probab=99.90 E-value=2.2e-22 Score=164.96 Aligned_cols=201 Identities=18% Similarity=0.228 Sum_probs=133.5
Q ss_pred CCceEEEEecCCCCCCCCch-----HHHHHHhCchHH-HHHHH--ccCChhHHHHHHHHHHHhCCCCHHHH-------HH
Q 044617 1 MADVVVVFDFDRTLIDDDSD-----NWVVTQMGLTHL-FNQLR--STLPWNSLMDRMMKELHSQGKTVEDI-------AN 65 (265)
Q Consensus 1 M~~k~iifD~DGTL~ds~~~-----~~~~~~~~~~~~-~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~ 65 (265)
|++++|+||+||||+|+... ..+++.++.+.. ...+. ................ ......+.+ ..
T Consensus 4 ~~~~~iiFD~DGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 82 (226)
T PRK13222 4 MDIRAVAFDLDGTLVDSAPDLAAAVNAALAALGLPPAGEERVRTWVGNGADVLVERALTWA-GREPDEELLEKLRELFDR 82 (226)
T ss_pred CcCcEEEEcCCcccccCHHHHHHHHHHHHHHCCCCCCCHHHHHHHhCccHHHHHHHHHhhc-cCCccHHHHHHHHHHHHH
Confidence 35899999999999998542 445555665421 11111 1111222222211110 011121111 11
Q ss_pred Hh-----cCCCCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCcccccceEEecCceecCCCceEEeecccccc
Q 044617 66 CL-----RQCPLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRILPYHDSTL 140 (265)
Q Consensus 66 ~~-----~~~~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~~ 140 (265)
.+ ....++||+.++|+.|+++|++++|+||+....+...++.+|+..+|+.+++.+ .....
T Consensus 83 ~~~~~~~~~~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~~~~~~--------------~~~~~ 148 (226)
T PRK13222 83 HYAENVAGGSRLYPGVKETLAALKAAGYPLAVVTNKPTPFVAPLLEALGIADYFSVVIGGD--------------SLPNK 148 (226)
T ss_pred HHHHhccccCccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCccCccEEEcCC--------------CCCCC
Confidence 11 246789999999999999999999999999999999999999998998877741 11123
Q ss_pred CCCcccccCCCCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccCCCCCCeeeecCCCchhhhhhcCCCeeeEEEEeC
Q 044617 141 SHHGCNLCPSNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRDCDFVMPRKNYPLWDRICSNPMLIKAKVHEW 220 (265)
Q Consensus 141 kp~~~~~~~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (265)
|| ++.+++.++++++++++++++|||+.+|+.+|+++|...+++.. |+........ ..++..+
T Consensus 149 kp-----------~~~~~~~~~~~~~~~~~~~i~igD~~~Di~~a~~~g~~~i~v~~-g~~~~~~~~~--~~~~~~i--- 211 (226)
T PRK13222 149 KP-----------DPAPLLLACEKLGLDPEEMLFVGDSRNDIQAARAAGCPSVGVTY-GYNYGEPIAL--SEPDVVI--- 211 (226)
T ss_pred Cc-----------ChHHHHHHHHHcCCChhheEEECCCHHHHHHHHHCCCcEEEECc-CCCCccchhh--cCCCEEE---
Confidence 45 78999999999999999999999999999999998887666653 3332111211 1233455
Q ss_pred CCHHHHHHHHHHH
Q 044617 221 SSAEELKKILLHL 233 (265)
Q Consensus 221 ~~~~el~~~l~~~ 233 (265)
+++.||...|.+-
T Consensus 212 ~~~~~l~~~l~~~ 224 (226)
T PRK13222 212 DHFAELLPLLGLA 224 (226)
T ss_pred CCHHHHHHHHHHh
Confidence 9999998887653
No 19
>TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702).
Probab=99.90 E-value=6.8e-23 Score=166.60 Aligned_cols=130 Identities=18% Similarity=0.165 Sum_probs=102.9
Q ss_pred CCCCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCcccccceEEecCceecCCCceEEeeccccccCCCccccc
Q 044617 69 QCPLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRILPYHDSTLSHHGCNLC 148 (265)
Q Consensus 69 ~~~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp~~~~~~ 148 (265)
...++||+.++|+.|+++|++++|+||+....++..++++|+..+|+.+++.+. ....||
T Consensus 83 ~~~~~~g~~~~L~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~~~~~~~--------------~~~~Kp------ 142 (213)
T TIGR01449 83 LTSVFPGVEATLGALRAKGLRLGLVTNKPTPLARPLLELLGLAKYFSVLIGGDS--------------LAQRKP------ 142 (213)
T ss_pred cCccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCcHhhCcEEEecCC--------------CCCCCC------
Confidence 367899999999999999999999999999999999999999999998887521 112355
Q ss_pred CCCCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccCCCCCCeeeecCCCchhhhhhcCCCeeeEEEEeCCCHHHHHH
Q 044617 149 PSNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRDCDFVMPRKNYPLWDRICSNPMLIKAKVHEWSSAEELKK 228 (265)
Q Consensus 149 ~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~ 228 (265)
+|..+.++++++|++++++++|||+.+|+.+|+++|...+++. +|+.....+... .++..+ +++.||..
T Consensus 143 -----~p~~~~~~~~~~~~~~~~~~~igDs~~d~~aa~~aG~~~i~v~-~g~~~~~~l~~~--~a~~~i---~~~~~l~~ 211 (213)
T TIGR01449 143 -----HPDPLLLAAERLGVAPQQMVYVGDSRVDIQAARAAGCPSVLLT-YGYRYGEAIDLL--PPDVLY---DSLNELPP 211 (213)
T ss_pred -----ChHHHHHHHHHcCCChhHeEEeCCCHHHHHHHHHCCCeEEEEc-cCCCCCcchhhc--CCCeEe---CCHHHHHh
Confidence 8999999999999999999999999999999999887666554 444322222111 233445 88988876
Q ss_pred H
Q 044617 229 I 229 (265)
Q Consensus 229 ~ 229 (265)
+
T Consensus 212 ~ 212 (213)
T TIGR01449 212 L 212 (213)
T ss_pred h
Confidence 4
No 20
>PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed
Probab=99.89 E-value=2.2e-22 Score=164.35 Aligned_cols=209 Identities=18% Similarity=0.276 Sum_probs=135.4
Q ss_pred CCceEEEEecCCCCCCCCchHHHHHHhCchH---HHHHHHc-cCChhHHHHHHHHHHHhCCCCHHHHHHH-hcCCCCChh
Q 044617 1 MADVVVVFDFDRTLIDDDSDNWVVTQMGLTH---LFNQLRS-TLPWNSLMDRMMKELHSQGKTVEDIANC-LRQCPLDSH 75 (265)
Q Consensus 1 M~~k~iifD~DGTL~ds~~~~~~~~~~~~~~---~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~g 75 (265)
||.++|+|||||||++++....+++.++... ....+.. ...|...+......+.. ...+++.+. .....++||
T Consensus 1 ~~~~~vifDfDgTi~~~d~~~~~~~~~~~~~~~~i~~~~~~g~~~~~~~~~~~~~~l~~--~~~~~~~~~~~~~~~l~pG 78 (219)
T PRK09552 1 MMSIQIFCDFDGTITNNDNIIAIMKKFAPPEWEELKDDILSQELSIQEGVGQMFQLLPS--NLKEEIIQFLLETAEIREG 78 (219)
T ss_pred CCCcEEEEcCCCCCCcchhhHHHHHHhCHHHHHHHHHHHHhCCcCHHHHHHHHHHhCCC--CchHHHHHHHHhCCCcCcC
Confidence 7888999999999999998776666665432 1111221 22455555554444322 122444443 356889999
Q ss_pred HHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCcccccceEEecCceecCCCceEEeeccccccCCCcccc-c--CCCC
Q 044617 76 VAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRILPYHDSTLSHHGCNL-C--PSNL 152 (265)
Q Consensus 76 ~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp~~~~~-~--~~~~ 152 (265)
+.++|+.|+++|++++|+|++...++..+++++ +.. +.++++...++++ .... .||+.+.. + ..+.
T Consensus 79 ~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~-~~~--~~i~~n~~~~~~~-~~~~-------~kp~p~~~~~~~~~~~ 147 (219)
T PRK09552 79 FHEFVQFVKENNIPFYVVSGGMDFFVYPLLQGL-IPK--EQIYCNGSDFSGE-YITI-------TWPHPCDEHCQNHCGC 147 (219)
T ss_pred HHHHHHHHHHcCCeEEEECCCcHHHHHHHHHHh-CCc--CcEEEeEEEecCC-eeEE-------eccCCccccccccCCC
Confidence 999999999999999999999999999999998 643 3567665545422 2221 12322110 0 1134
Q ss_pred chHHHHHHHHHhcCCCCceEEEEcCCCCCcccccCCCCCCeeeecCCCchhhhhhcCCCeeeEEEEeCCCHHHHHHHHHH
Q 044617 153 CKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRDCDFVMPRKNYPLWDRICSNPMLIKAKVHEWSSAEELKKILLH 232 (265)
Q Consensus 153 ~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~l~~ 232 (265)
+|+. ++++++..+.+++|||||.+|+++|++ +++.+++. .......+.. ..+..|++|.||.+.|++
T Consensus 148 ~K~~----~l~~~~~~~~~~i~iGDs~~Di~aa~~---Ag~~~a~~--~l~~~~~~~~----~~~~~~~~f~ei~~~l~~ 214 (219)
T PRK09552 148 CKPS----LIRKLSDTNDFHIVIGDSITDLEAAKQ---ADKVFARD--FLITKCEELG----IPYTPFETFHDVQTELKH 214 (219)
T ss_pred chHH----HHHHhccCCCCEEEEeCCHHHHHHHHH---CCcceeHH--HHHHHHHHcC----CCccccCCHHHHHHHHHH
Confidence 5775 445567788899999999999999954 55566643 1112111211 234456999999999887
Q ss_pred HHH
Q 044617 233 LIG 235 (265)
Q Consensus 233 ~~~ 235 (265)
+.+
T Consensus 215 ~~~ 217 (219)
T PRK09552 215 LLE 217 (219)
T ss_pred Hhc
Confidence 653
No 21
>TIGR00338 serB phosphoserine phosphatase SerB. Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins.
Probab=99.89 E-value=3e-22 Score=163.59 Aligned_cols=172 Identities=20% Similarity=0.298 Sum_probs=123.3
Q ss_pred CceEEEEecCCCCCCCCchHHHHHHhCchHHHHHHHc-----cCChhHHHHHHHHHHHhCCCCHHHHHHHhcCCCCChhH
Q 044617 2 ADVVVVFDFDRTLIDDDSDNWVVTQMGLTHLFNQLRS-----TLPWNSLMDRMMKELHSQGKTVEDIANCLRQCPLDSHV 76 (265)
Q Consensus 2 ~~k~iifD~DGTL~ds~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 76 (265)
|+++|+|||||||++++....+++.+|.+.....+.. ...+..........+ .+...+.+.......+++||+
T Consensus 13 ~~k~iiFD~DGTL~~~~~~~~l~~~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~g~ 90 (219)
T TIGR00338 13 SKKLVVFDMDSTLINAETIDEIAKIAGVEEEVSEITERAMRGELDFKASLRERVALL--KGLPVELLKEVRENLPLTEGA 90 (219)
T ss_pred cCCEEEEeCcccCCCchHHHHHHHHhCCHHHHHHHHHHHHcCCCCHHHHHHHHHHHh--CCCCHHHHHHHHhcCCcCCCH
Confidence 4789999999999999888888888887644332221 123333333322222 344556666666778899999
Q ss_pred HHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCcccccceEEecCceecCCCceEEeeccccccCCCcccccCCCCchHH
Q 044617 77 AAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRILPYHDSTLSHHGCNLCPSNLCKGF 156 (265)
Q Consensus 77 ~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp~~~~~~~~~~~K~~ 156 (265)
.++|+.|+++|++++|+||+....+..+++.+|+..+|...+. ++ ++.++...... + ..+.+|+.
T Consensus 91 ~~~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~~i~~~~~~~~~----~~-~~~~~~~~~~~----~------~~~~~k~~ 155 (219)
T TIGR00338 91 EELVKTLKEKGYKVAVISGGFDLFAEHVKDKLGLDAAFANRLE----VE-DGKLTGLVEGP----I------VDASYKGK 155 (219)
T ss_pred HHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCceEeeEEE----EE-CCEEEEEecCc----c------cCCcccHH
Confidence 9999999999999999999999999999999998765543222 22 22222211110 0 00123899
Q ss_pred HHHHHHHhcCCCCceEEEEcCCCCCcccccCCCC
Q 044617 157 VLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRD 190 (265)
Q Consensus 157 ~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~ 190 (265)
.++.+++++++++++++||||+.+|+.+|+++|.
T Consensus 156 ~~~~~~~~~~~~~~~~i~iGDs~~Di~aa~~ag~ 189 (219)
T TIGR00338 156 TLLILLRKEGISPENTVAVGDGANDLSMIKAAGL 189 (219)
T ss_pred HHHHHHHHcCCCHHHEEEEECCHHHHHHHHhCCC
Confidence 9999999999999999999999999999977554
No 22
>PLN02575 haloacid dehalogenase-like hydrolase
Probab=99.89 E-value=2.2e-22 Score=173.83 Aligned_cols=199 Identities=12% Similarity=0.083 Sum_probs=133.5
Q ss_pred ceEEEEecCCCCCCCCc-h-----HHHHHHhCchHHHHHHHcc---CChhHHHHHHHHHHHhCCCC--------HHHHHH
Q 044617 3 DVVVVFDFDRTLIDDDS-D-----NWVVTQMGLTHLFNQLRST---LPWNSLMDRMMKELHSQGKT--------VEDIAN 65 (265)
Q Consensus 3 ~k~iifD~DGTL~ds~~-~-----~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~--------~~~~~~ 65 (265)
.++|||||||||+|+.. . ..+++..|.+....+.... .........+.... ..... .+.+.+
T Consensus 131 ~~~VIFDlDGTLIDS~~~i~~~a~~~l~~e~G~~~~~~e~~~~~~G~~~~~~l~~ll~~~-~~~~~~e~l~~~~~~~y~~ 209 (381)
T PLN02575 131 WLGAIFEWEGVIIEDNPDLENQAWLTLAQEEGKSPPPAFILRRVEGMKNEQAISEVLCWS-RDPAELRRMATRKEEIYQA 209 (381)
T ss_pred CCEEEEcCcCcceeCHHHHHHHHHHHHHHHcCCCCCHHHHHHHhcCCCHHHHHHHHhhcc-CCHHHHHHHHHHHHHHHHH
Confidence 57899999999999864 2 3345566665332222211 11122222211100 00000 011111
Q ss_pred Hh-cCCCCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCcccccceEEecCceecCCCceEEeeccccccCCCc
Q 044617 66 CL-RQCPLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRILPYHDSTLSHHG 144 (265)
Q Consensus 66 ~~-~~~~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp~~ 144 (265)
.. ....++||+.++|+.|+++|++++|+||+....++..++++|+..+|+.+++.+. ....||
T Consensus 210 ~~~~~~~l~pGa~ElL~~Lk~~GiklaIaSn~~~~~~~~~L~~lgL~~yFd~Iv~sdd--------------v~~~KP-- 273 (381)
T PLN02575 210 LQGGIYRLRTGSQEFVNVLMNYKIPMALVSTRPRKTLENAIGSIGIRGFFSVIVAAED--------------VYRGKP-- 273 (381)
T ss_pred HhccCCCcCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCHHHceEEEecCc--------------CCCCCC--
Confidence 11 2457899999999999999999999999999999999999999999999998521 112356
Q ss_pred ccccCCCCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccCCCCCCeeeecCCCchhhhhhcCCCeeeEEEEeCCCHH
Q 044617 145 CNLCPSNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRDCDFVMPRKNYPLWDRICSNPMLIKAKVHEWSSAE 224 (265)
Q Consensus 145 ~~~~~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (265)
+|+++..+++++|+.|++|++|||+..|+++|+++|+..+++.. ++.... +. .++..+ +++.
T Consensus 274 ---------~Peifl~A~~~lgl~Peecl~IGDS~~DIeAAk~AGm~~IgV~~-~~~~~~-l~----~Ad~iI---~s~~ 335 (381)
T PLN02575 274 ---------DPEMFIYAAQLLNFIPERCIVFGNSNQTVEAAHDARMKCVAVAS-KHPIYE-LG----AADLVV---RRLD 335 (381)
T ss_pred ---------CHHHHHHHHHHcCCCcccEEEEcCCHHHHHHHHHcCCEEEEECC-CCChhH-hc----CCCEEE---CCHH
Confidence 89999999999999999999999999999999998887666653 333222 11 133445 9999
Q ss_pred HHHHHHHHHHHh
Q 044617 225 ELKKILLHLIGA 236 (265)
Q Consensus 225 el~~~l~~~~~~ 236 (265)
||.....+-+.+
T Consensus 336 EL~~~~l~~l~~ 347 (381)
T PLN02575 336 ELSIVDLKNLAD 347 (381)
T ss_pred HHHHHHHhhhhh
Confidence 984443343333
No 23
>PRK14988 GMP/IMP nucleotidase; Provisional
Probab=99.89 E-value=2.2e-22 Score=164.67 Aligned_cols=105 Identities=10% Similarity=0.109 Sum_probs=91.0
Q ss_pred cCCCCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCcccccceEEecCceecCCCceEEeeccccccCCCcccc
Q 044617 68 RQCPLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRILPYHDSTLSHHGCNL 147 (265)
Q Consensus 68 ~~~~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp~~~~~ 147 (265)
....++||+.++|+.|+++|++++|+||+....+...++++|+..+|+.+++++ .....||
T Consensus 90 ~~~~~~~g~~e~L~~Lk~~g~~~~i~Tn~~~~~~~~~l~~~~l~~~fd~iv~s~--------------~~~~~KP----- 150 (224)
T PRK14988 90 PRAVLREDTVPFLEALKASGKRRILLTNAHPHNLAVKLEHTGLDAHLDLLLSTH--------------TFGYPKE----- 150 (224)
T ss_pred ccCCcCCCHHHHHHHHHhCCCeEEEEeCcCHHHHHHHHHHCCcHHHCCEEEEee--------------eCCCCCC-----
Confidence 457889999999999999999999999999999999999999999999988852 1122456
Q ss_pred cCCCCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccCCCCCCeeeec
Q 044617 148 CPSNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRDCDFVMPR 197 (265)
Q Consensus 148 ~~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~~~~~~~~ 197 (265)
+|..+..+++++|++|++|++|||+.+|+++|+++|+..++.+.
T Consensus 151 ------~p~~~~~~~~~~~~~p~~~l~igDs~~di~aA~~aG~~~~~~v~ 194 (224)
T PRK14988 151 ------DQRLWQAVAEHTGLKAERTLFIDDSEPILDAAAQFGIRYCLGVT 194 (224)
T ss_pred ------CHHHHHHHHHHcCCChHHEEEEcCCHHHHHHHHHcCCeEEEEEe
Confidence 89999999999999999999999999999999998886544333
No 24
>PRK13223 phosphoglycolate phosphatase; Provisional
Probab=99.89 E-value=3.1e-22 Score=168.37 Aligned_cols=199 Identities=15% Similarity=0.169 Sum_probs=132.1
Q ss_pred ceEEEEecCCCCCCCCc-----hHHHHHHhCchHH-HHHHHc--cCChhHHHHHHHH-HHHhCCCCHH-------HHHHH
Q 044617 3 DVVVVFDFDRTLIDDDS-----DNWVVTQMGLTHL-FNQLRS--TLPWNSLMDRMMK-ELHSQGKTVE-------DIANC 66 (265)
Q Consensus 3 ~k~iifD~DGTL~ds~~-----~~~~~~~~~~~~~-~~~~~~--~~~~~~~~~~~~~-~~~~~~~~~~-------~~~~~ 66 (265)
+++|+|||||||+|+.. ...+++++|.+.. ...+.. ..+.......... .+...+...+ .+.+.
T Consensus 13 ~k~viFDlDGTL~Ds~~~~~~a~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 92 (272)
T PRK13223 13 PRLVMFDLDGTLVDSVPDLAAAVDRMLLELGRPPAGLEAVRHWVGNGAPVLVRRALAGSIDHDGVDDELAEQALALFMEA 92 (272)
T ss_pred CCEEEEcCCCccccCHHHHHHHHHHHHHHcCCCCCCHHHHHHHhChhHHHHHHHHhcccccccCCCHHHHHHHHHHHHHH
Confidence 68999999999999954 3556667776521 111111 1111111111110 0000111111 11111
Q ss_pred h----cCCCCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCcccccceEEecCceecCCCceEEeeccccccCC
Q 044617 67 L----RQCPLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRILPYHDSTLSH 142 (265)
Q Consensus 67 ~----~~~~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp 142 (265)
+ ....++||+.++|+.|+++|++++|+||+....+...++++++..+|+.+++.+. ....||
T Consensus 93 ~~~~~~~~~~~~g~~e~L~~Lk~~g~~l~ivTn~~~~~~~~~l~~~~i~~~f~~i~~~d~--------------~~~~Kp 158 (272)
T PRK13223 93 YADSHELTVVYPGVRDTLKWLKKQGVEMALITNKPERFVAPLLDQMKIGRYFRWIIGGDT--------------LPQKKP 158 (272)
T ss_pred HHhcCcCCccCCCHHHHHHHHHHCCCeEEEEECCcHHHHHHHHHHcCcHhhCeEEEecCC--------------CCCCCC
Confidence 1 2356899999999999999999999999999999999999999999998887421 112345
Q ss_pred CcccccCCCCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccCCCCCCeeeecCCCchhhhhhcCCCeeeEEEEeCCC
Q 044617 143 HGCNLCPSNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRDCDFVMPRKNYPLWDRICSNPMLIKAKVHEWSS 222 (265)
Q Consensus 143 ~~~~~~~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (265)
++..++.+++++|++++++++|||+.+|+.+|+++|...+++. +|+.....+... .++..+ ++
T Consensus 159 -----------~p~~~~~~~~~~g~~~~~~l~IGD~~~Di~aA~~aGi~~i~v~-~G~~~~~~l~~~--~~~~vi---~~ 221 (272)
T PRK13223 159 -----------DPAALLFVMKMAGVPPSQSLFVGDSRSDVLAAKAAGVQCVALS-YGYNHGRPIAEE--SPALVI---DD 221 (272)
T ss_pred -----------CcHHHHHHHHHhCCChhHEEEECCCHHHHHHHHHCCCeEEEEe-cCCCCchhhhhc--CCCEEE---CC
Confidence 8899999999999999999999999999999999887766655 444333222211 234445 88
Q ss_pred HHHHHHHHHH
Q 044617 223 AEELKKILLH 232 (265)
Q Consensus 223 ~~el~~~l~~ 232 (265)
+.||.+.+..
T Consensus 222 l~el~~~~~~ 231 (272)
T PRK13223 222 LRALLPGCAD 231 (272)
T ss_pred HHHHHHHHhc
Confidence 9998866553
No 25
>TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549).
Probab=99.89 E-value=5.4e-22 Score=162.22 Aligned_cols=105 Identities=13% Similarity=0.128 Sum_probs=91.6
Q ss_pred CCCCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCcccccceEEecCceecCCCceEEeeccccccCCCccccc
Q 044617 69 QCPLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRILPYHDSTLSHHGCNLC 148 (265)
Q Consensus 69 ~~~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp~~~~~~ 148 (265)
...++||+.++|+.|+++|++++|+||+....+...++.+|+..+|+.+++.. .....||
T Consensus 92 ~~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~~l~~~f~~i~~~~--------------~~~~~KP------ 151 (221)
T TIGR02253 92 YLRVYPGVRDTLMELRESGYRLGIITDGLPVKQWEKLERLGVRDFFDAVITSE--------------EEGVEKP------ 151 (221)
T ss_pred hCCCCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHhCChHHhccEEEEec--------------cCCCCCC------
Confidence 46889999999999999999999999999999999999999999999988741 1223456
Q ss_pred CCCCchHHHHHHHHHhcCCCCceEEEEcCCC-CCcccccCCCCCCeeeecC
Q 044617 149 PSNLCKGFVLDHVCTSFGCGKQRFIYLGDGR-GDFCPTLKLRDCDFVMPRK 198 (265)
Q Consensus 149 ~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~-~Di~~a~~~~~~~~~~~~~ 198 (265)
++..+..+++++|++++++++|||+. +|+.+|+++|...+++...
T Consensus 152 -----~~~~~~~~~~~~~~~~~~~~~igDs~~~di~~A~~aG~~~i~~~~~ 197 (221)
T TIGR02253 152 -----HPKIFYAALKRLGVKPEEAVMVGDRLDKDIKGAKNLGMKTVWINQG 197 (221)
T ss_pred -----CHHHHHHHHHHcCCChhhEEEECCChHHHHHHHHHCCCEEEEECCC
Confidence 88999999999999999999999998 9999999988877666544
No 26
>COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only]
Probab=99.88 E-value=5.5e-22 Score=161.86 Aligned_cols=172 Identities=16% Similarity=0.125 Sum_probs=125.2
Q ss_pred ceEEEEecCCCCCCCCch-----HHHHHHhCchHH---HHHHHccCChhHHHHHHHHHHHhC-CCCH--------HHHHH
Q 044617 3 DVVVVFDFDRTLIDDDSD-----NWVVTQMGLTHL---FNQLRSTLPWNSLMDRMMKELHSQ-GKTV--------EDIAN 65 (265)
Q Consensus 3 ~k~iifD~DGTL~ds~~~-----~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~-~~~~--------~~~~~ 65 (265)
++++||||||||+||... ..+++++|+... .........+... .......... +... .....
T Consensus 2 ~~avIFD~DGvLvDse~~~~~a~~~~~~~~g~~~~~~~~~~~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (221)
T COG0637 2 IKAVIFDMDGTLVDSEPLHARAWLEALKEYGIEISDEEIRELHGGGIARII-DLLRKLAAGEDPADLAELERLLYEAEAL 80 (221)
T ss_pred CcEEEEcCCCCcCcchHHHHHHHHHHHHHcCCCCCHHHHHHHHCCChHHHH-HHHHHHhcCCcccCHHHHHHHHHHHHHh
Confidence 689999999999999764 556667776532 2222222212211 1111111100 0111 11112
Q ss_pred HhcCCCCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCcccccceEEecCceecCCCceEEeeccccccCCCcc
Q 044617 66 CLRQCPLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRILPYHDSTLSHHGC 145 (265)
Q Consensus 66 ~~~~~~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp~~~ 145 (265)
......+.||+.++|++|+++|++++++|++....+...++.+|+.++|+.+++.. .....||
T Consensus 81 ~~~~~~~~pGv~~~l~~L~~~~i~~avaS~s~~~~~~~~L~~~gl~~~f~~~v~~~--------------dv~~~KP--- 143 (221)
T COG0637 81 ELEGLKPIPGVVELLEQLKARGIPLAVASSSPRRAAERVLARLGLLDYFDVIVTAD--------------DVARGKP--- 143 (221)
T ss_pred hhcCCCCCccHHHHHHHHHhcCCcEEEecCChHHHHHHHHHHccChhhcchhccHH--------------HHhcCCC---
Confidence 33467899999999999999999999999999999999999999999999887752 1222367
Q ss_pred cccCCCCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccCCCCCCeeeecCCCc
Q 044617 146 NLCPSNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRDCDFVMPRKNYP 201 (265)
Q Consensus 146 ~~~~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~~~~~~~~~~~~ 201 (265)
.|+.+..+++++|++|++|+.|+|+.+++.+|+++|+..+++.. +++
T Consensus 144 --------~Pd~yL~Aa~~Lgv~P~~CvviEDs~~Gi~Aa~aAGm~vv~v~~-~~~ 190 (221)
T COG0637 144 --------APDIYLLAAERLGVDPEECVVVEDSPAGIQAAKAAGMRVVGVPA-GHD 190 (221)
T ss_pred --------CCHHHHHHHHHcCCChHHeEEEecchhHHHHHHHCCCEEEEecC-CCC
Confidence 89999999999999999999999999999999999988888876 444
No 27
>TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal. This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog.
Probab=99.88 E-value=4.4e-21 Score=154.44 Aligned_cols=172 Identities=15% Similarity=0.117 Sum_probs=117.7
Q ss_pred ceEEEEecCCCCCCCCc-hHHHHHHhCchHHHHH---HHc--cCChhHHHHHHHHHHHh--CCCCHHHHHHHhcCCCCCh
Q 044617 3 DVVVVFDFDRTLIDDDS-DNWVVTQMGLTHLFNQ---LRS--TLPWNSLMDRMMKELHS--QGKTVEDIANCLRQCPLDS 74 (265)
Q Consensus 3 ~k~iifD~DGTL~ds~~-~~~~~~~~~~~~~~~~---~~~--~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~ 74 (265)
+|+|+|||||||++++. ..++...++.+..... .+. ...+............. .....+.+...+....++|
T Consensus 4 ~k~viFD~DGTLid~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (201)
T TIGR01491 4 IKLIIFDLDGTLTDVMSSWEYLHRRLETCGLAKKNAELFFSGRISYEEWARLDASLWKRRSGRLRREEVEEIFKEISLRD 83 (201)
T ss_pred ceEEEEeCCCCCcCCccHHHHHHHHhCchHHHHHHHHHHHcCCCCHHHHHHHHHHHHhhcccCCCHHHHHHHHHhCCCCc
Confidence 68999999999999765 3555555666532221 111 22333333222222211 1234555666677789999
Q ss_pred hHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCcccccceEEecCceecCCCceEEeeccccccCCCcccccCCCCch
Q 044617 75 HVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRILPYHDSTLSHHGCNLCPSNLCK 154 (265)
Q Consensus 75 g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp~~~~~~~~~~~K 154 (265)
|+.++|+.|+++|++++|+||+....++.+++.+|+..+|...+. .++.+...+.++.. ....+|
T Consensus 84 g~~e~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~g~~~~~~~~~~----~~~~g~~~p~~~~~-----------~~~~~k 148 (201)
T TIGR01491 84 YAEELVRWLKEKGLKTAIVSGGIMCLAKKVAEKLNPDYVYSNELV----FDEKGFIQPDGIVR-----------VTFDNK 148 (201)
T ss_pred cHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHhCCCeEEEEEEE----EcCCCeEecceeeE-----------EccccH
Confidence 999999999999999999999999999999999998765544333 23334333211110 001238
Q ss_pred HHHHHHHHHhcCCCCceEEEEcCCCCCcccccCCC
Q 044617 155 GFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLR 189 (265)
Q Consensus 155 ~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~ 189 (265)
+..++++++++|+++++++||||+.+|+.+|+.+|
T Consensus 149 ~~~~~~~~~~~~~~~~~~i~iGDs~~D~~~a~~ag 183 (201)
T TIGR01491 149 GEAVERLKRELNPSLTETVAVGDSKNDLPMFEVAD 183 (201)
T ss_pred HHHHHHHHHHhCCCHHHEEEEcCCHhHHHHHHhcC
Confidence 88999999999999999999999999999996644
No 28
>TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II. Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related.
Probab=99.88 E-value=1.9e-21 Score=156.45 Aligned_cols=111 Identities=15% Similarity=0.224 Sum_probs=96.5
Q ss_pred HHHhcCCCCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCcccccceEEecCceecCCCceEEeeccccccCCC
Q 044617 64 ANCLRQCPLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRILPYHDSTLSHH 143 (265)
Q Consensus 64 ~~~~~~~~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp~ 143 (265)
.+.+....++||+.++|++|+++|++++|+||+....+...++.+|+..+|+.+++++ .....||
T Consensus 85 ~~~~~~~~~~~~~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~gl~~~fd~i~~s~--------------~~~~~KP- 149 (198)
T TIGR01428 85 AEAYLRLPPHPDVPAGLRALKERGYRLAILSNGSPAMLKSLVKHAGLDDPFDAVLSAD--------------AVRAYKP- 149 (198)
T ss_pred HHHHhcCCCCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHCCChhhhheeEehh--------------hcCCCCC-
Confidence 3444567889999999999999999999999999999999999999999999998852 1122356
Q ss_pred cccccCCCCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccCCCCCCeeeecCC
Q 044617 144 GCNLCPSNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRDCDFVMPRKN 199 (265)
Q Consensus 144 ~~~~~~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~~~~~~~~~~ 199 (265)
++.++..+++++|++|+++++|||+.+|+.+|+++|+..+++.+.+
T Consensus 150 ----------~~~~~~~~~~~~~~~p~~~~~vgD~~~Di~~A~~~G~~~i~v~r~~ 195 (198)
T TIGR01428 150 ----------APQVYQLALEALGVPPDEVLFVASNPWDLGGAKKFGFKTAWVNRPG 195 (198)
T ss_pred ----------CHHHHHHHHHHhCCChhhEEEEeCCHHHHHHHHHCCCcEEEecCCC
Confidence 7999999999999999999999999999999999998877777653
No 29
>PRK13582 thrH phosphoserine phosphatase; Provisional
Probab=99.87 E-value=6.1e-21 Score=154.22 Aligned_cols=201 Identities=16% Similarity=0.151 Sum_probs=134.2
Q ss_pred ceEEEEecCCCCCCCCchHHHHHHhCchHHHHHHHccCChhHHHHHHHHHHHhCCCCHHHHHHHhcCCCCChhHHHHHHH
Q 044617 3 DVVVVFDFDRTLIDDDSDNWVVTQMGLTHLFNQLRSTLPWNSLMDRMMKELHSQGKTVEDIANCLRQCPLDSHVAAAIKS 82 (265)
Q Consensus 3 ~k~iifD~DGTL~ds~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~e~l~~ 82 (265)
+++|+|||||||++. ....+.+++|.+...........|...+..-...+...+.+.+.+........++||+.++|+.
T Consensus 1 ~~~v~FD~DGTL~~~-~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~~~~~~~~pg~~e~L~~ 79 (205)
T PRK13582 1 MEIVCLDLEGVLVPE-IWIAFAEKTGIPELRATTRDIPDYDVLMKQRLDILDEHGLGLADIQEVIATLDPLPGAVEFLDW 79 (205)
T ss_pred CeEEEEeCCCCChhh-HHHHHHHHcCChHHHHHhcCCCCHHHHHHHHHHHHHHcCCCHHHHHHHHHhCCCCCCHHHHHHH
Confidence 389999999999964 4456777888776433222234566666665566655567778888888888999999999999
Q ss_pred HHHcCCcEEEEeCCCHHHHHHHHHhcCcccccceEEecCceecCCCceEEeeccccccCCCcccccCCCCchHHHHHHHH
Q 044617 83 AHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRILPYHDSTLSHHGCNLCPSNLCKGFVLDHVC 162 (265)
Q Consensus 83 l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp~~~~~~~~~~~K~~~i~~~~ 162 (265)
|+++ ++++|+||+...+++.+++++|+..+|...+. +++++.+..... .+| ..|...++
T Consensus 80 L~~~-~~~~IvS~~~~~~~~~~l~~~gl~~~f~~~~~----~~~~~~i~~~~~----~~p---------~~k~~~l~--- 138 (205)
T PRK13582 80 LRER-FQVVILSDTFYEFAGPLMRQLGWPTLFCHSLE----VDEDGMITGYDL----RQP---------DGKRQAVK--- 138 (205)
T ss_pred HHhc-CCEEEEeCCcHHHHHHHHHHcCCchhhcceEE----ECCCCeEECccc----ccc---------chHHHHHH---
Confidence 9999 99999999999999999999999877654333 222222211000 011 12444444
Q ss_pred HhcCCCCceEEEEcCCCCCcccccCCCCCCeeeecCCCchhhhhhcCCCeeeEEEEeCCCHHHHHHHHHHHHHh
Q 044617 163 TSFGCGKQRFIYLGDGRGDFCPTLKLRDCDFVMPRKNYPLWDRICSNPMLIKAKVHEWSSAEELKKILLHLIGA 236 (265)
Q Consensus 163 ~~~gi~~~~~v~vGD~~~Di~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~l~~~~~~ 236 (265)
+++..+++++|||||.+|+.++++++. ++.+. ... ......+ .. ..++++.||.++|.++..+
T Consensus 139 -~~~~~~~~~v~iGDs~~D~~~~~aa~~-~v~~~---~~~-~~~~~~~---~~--~~~~~~~el~~~l~~~~~~ 201 (205)
T PRK13582 139 -ALKSLGYRVIAAGDSYNDTTMLGEADA-GILFR---PPA-NVIAEFP---QF--PAVHTYDELLAAIDKASAR 201 (205)
T ss_pred -HHHHhCCeEEEEeCCHHHHHHHHhCCC-CEEEC---CCH-HHHHhCC---cc--cccCCHHHHHHHHHHHHhh
Confidence 334456899999999999999977553 45432 221 2122122 11 1249999999888877543
No 30
>PRK10563 6-phosphogluconate phosphatase; Provisional
Probab=99.87 E-value=7.2e-22 Score=161.57 Aligned_cols=168 Identities=14% Similarity=0.175 Sum_probs=116.6
Q ss_pred CceEEEEecCCCCCCCCch-----HHHHHHhCchHHHHHHHcc---CChhHHHHHHHHHHHhCCCCHHHHHH--------
Q 044617 2 ADVVVVFDFDRTLIDDDSD-----NWVVTQMGLTHLFNQLRST---LPWNSLMDRMMKELHSQGKTVEDIAN-------- 65 (265)
Q Consensus 2 ~~k~iifD~DGTL~ds~~~-----~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~-------- 65 (265)
++++|+||+||||+|+... ..++..+|.+....+.+.. .........+..... .....+.+..
T Consensus 3 ~~~~viFD~DGTL~d~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 81 (221)
T PRK10563 3 QIEAVFFDCDGTLVDSEVICSRAYVTMFAEFGITLSLEEVFKRFKGVKLYEIIDIISKEHG-VTLAKAELEPVYRAEVAR 81 (221)
T ss_pred CCCEEEECCCCCCCCChHHHHHHHHHHHHHcCCCCCHHHHHHHhcCCCHHHHHHHHHHHhC-CCCCHHHHHHHHHHHHHH
Confidence 4799999999999999653 4455566654322222222 122222222222211 1122222221
Q ss_pred H-hcCCCCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCcccccc-eEEecCceecCCCceEEeeccccccCCC
Q 044617 66 C-LRQCPLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFS-EIYTNPTYVDEQGRLRILPYHDSTLSHH 143 (265)
Q Consensus 66 ~-~~~~~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~-~i~~~~~~~d~~~~~~~~~~~~~~~kp~ 143 (265)
. .....++||+.++|+.| +++++|+||+....+...++.+|+..+|+ .+++. ......||
T Consensus 82 ~~~~~~~~~~gv~~~L~~L---~~~~~ivTn~~~~~~~~~l~~~~l~~~F~~~v~~~--------------~~~~~~KP- 143 (221)
T PRK10563 82 LFDSELEPIAGANALLESI---TVPMCVVSNGPVSKMQHSLGKTGMLHYFPDKLFSG--------------YDIQRWKP- 143 (221)
T ss_pred HHHccCCcCCCHHHHHHHc---CCCEEEEeCCcHHHHHHHHHhcChHHhCcceEeeH--------------HhcCCCCC-
Confidence 1 13468899999999998 38999999999999999999999999996 45553 11123456
Q ss_pred cccccCCCCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccCCCCCCeeeecC
Q 044617 144 GCNLCPSNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRDCDFVMPRK 198 (265)
Q Consensus 144 ~~~~~~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~~~~~~~~~ 198 (265)
+++.+..+++++|++|++|++|||+.+|+++|+++|...+.++.+
T Consensus 144 ----------~p~~~~~a~~~~~~~p~~~l~igDs~~di~aA~~aG~~~i~~~~~ 188 (221)
T PRK10563 144 ----------DPALMFHAAEAMNVNVENCILVDDSSAGAQSGIAAGMEVFYFCAD 188 (221)
T ss_pred ----------ChHHHHHHHHHcCCCHHHeEEEeCcHhhHHHHHHCCCEEEEECCC
Confidence 899999999999999999999999999999999988766655443
No 31
>TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase. All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509).
Probab=99.87 E-value=2.1e-21 Score=154.34 Aligned_cols=163 Identities=14% Similarity=0.176 Sum_probs=112.4
Q ss_pred ceEEEEecCCCCCCCCch-----HHHHHHhCchHH--HHHHHccCChhHHHHHHHHHHHhCCCCHHHH-----------H
Q 044617 3 DVVVVFDFDRTLIDDDSD-----NWVVTQMGLTHL--FNQLRSTLPWNSLMDRMMKELHSQGKTVEDI-----------A 64 (265)
Q Consensus 3 ~k~iifD~DGTL~ds~~~-----~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~ 64 (265)
+++|+||+||||+|+... ..+++++|.+.. ................+.... ..+.+.+.+ .
T Consensus 1 ~~~iiFD~DGTL~ds~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 79 (185)
T TIGR02009 1 YKAVIFDMDGVIVDTAPLHAQAWKHLADKYGIEFDKQYNTSLGGLSREDILRAILKLR-KPGLSLETIHQLAERKNELYR 79 (185)
T ss_pred CCeEEEcCCCcccCChHHHHHHHHHHHHHcCCCCCHHHHHHcCCCCHHHHHHHHHHhc-CCCCCHHHHHHHHHHHHHHHH
Confidence 478999999999999753 445666665421 111111111122222221111 002222211 1
Q ss_pred HHh--cCCCCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCcccccceEEecCceecCCCceEEeeccccccCC
Q 044617 65 NCL--RQCPLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRILPYHDSTLSH 142 (265)
Q Consensus 65 ~~~--~~~~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp 142 (265)
+.+ ....++||+.++|+.|+++|++++++||+ ..++..++.+|+..+|+.+++.. .....||
T Consensus 80 ~~~~~~~~~~~~g~~~~l~~l~~~g~~i~i~S~~--~~~~~~l~~~~l~~~f~~v~~~~--------------~~~~~kp 143 (185)
T TIGR02009 80 ELLRLTGAEVLPGIENFLKRLKKKGIAVGLGSSS--KNADRILAKLGLTDYFDAIVDAD--------------EVKEGKP 143 (185)
T ss_pred HHHhccCCCCCcCHHHHHHHHHHcCCeEEEEeCc--hhHHHHHHHcChHHHCCEeeehh--------------hCCCCCC
Confidence 222 23688999999999999999999999998 66888999999999999988751 1112355
Q ss_pred CcccccCCCCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccCCCCCCe
Q 044617 143 HGCNLCPSNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRDCDF 193 (265)
Q Consensus 143 ~~~~~~~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~~~~ 193 (265)
++..+.+++++++++++++++|||+.+|+++|+++|...+
T Consensus 144 -----------~~~~~~~~~~~~~~~~~~~v~IgD~~~di~aA~~~G~~~i 183 (185)
T TIGR02009 144 -----------HPETFLLAAELLGVSPNECVVFEDALAGVQAARAAGMFAV 183 (185)
T ss_pred -----------ChHHHHHHHHHcCCCHHHeEEEeCcHhhHHHHHHCCCeEe
Confidence 7899999999999999999999999999999988776443
No 32
>TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases.
Probab=99.86 E-value=1.1e-20 Score=154.78 Aligned_cols=128 Identities=16% Similarity=0.125 Sum_probs=102.2
Q ss_pred CCCCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCcccccceEEecCceecCCCceEEeeccccccCCCccccc
Q 044617 69 QCPLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRILPYHDSTLSHHGCNLC 148 (265)
Q Consensus 69 ~~~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp~~~~~~ 148 (265)
...++||+.++|++|+++ ++++|+||+....+...++.+++..+|+.+++.. .....||
T Consensus 95 ~~~~~~g~~~~L~~l~~~-~~~~i~Sn~~~~~~~~~l~~~~l~~~fd~i~~~~--------------~~~~~KP------ 153 (224)
T TIGR02254 95 GHQLLPGAFELMENLQQK-FRLYIVTNGVRETQYKRLRKSGLFPFFDDIFVSE--------------DAGIQKP------ 153 (224)
T ss_pred cCeeCccHHHHHHHHHhc-CcEEEEeCCchHHHHHHHHHCCcHhhcCEEEEcC--------------ccCCCCC------
Confidence 467899999999999999 9999999999999999999999999999998852 1123456
Q ss_pred CCCCchHHHHHHHHHhc-CCCCceEEEEcCCC-CCcccccCCCCCCeeeecCCCchhhhhhcCCCeeeEEEEeCCCHHHH
Q 044617 149 PSNLCKGFVLDHVCTSF-GCGKQRFIYLGDGR-GDFCPTLKLRDCDFVMPRKNYPLWDRICSNPMLIKAKVHEWSSAEEL 226 (265)
Q Consensus 149 ~~~~~K~~~i~~~~~~~-gi~~~~~v~vGD~~-~Di~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el 226 (265)
++.++..+++++ |++|+++++|||+. +|+.+|+++|...+++..++.+.. .. ..++..+ +++.||
T Consensus 154 -----~~~~~~~~~~~~~~~~~~~~v~igD~~~~di~~A~~~G~~~i~~~~~~~~~~--~~---~~~~~~~---~~~~el 220 (224)
T TIGR02254 154 -----DKEIFNYALERMPKFSKEEVLMIGDSLTADIKGGQNAGLDTCWMNPDMHPNP--DD---IIPTYEI---RSLEEL 220 (224)
T ss_pred -----CHHHHHHHHHHhcCCCchheEEECCCcHHHHHHHHHCCCcEEEECCCCCCCC--CC---CCCceEE---CCHHHH
Confidence 899999999999 99999999999998 899999998887776654322211 11 1233445 889998
Q ss_pred HHHH
Q 044617 227 KKIL 230 (265)
Q Consensus 227 ~~~l 230 (265)
.++|
T Consensus 221 ~~~~ 224 (224)
T TIGR02254 221 YEIL 224 (224)
T ss_pred HhhC
Confidence 8753
No 33
>TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase. Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX.
Probab=99.86 E-value=2.4e-20 Score=151.77 Aligned_cols=205 Identities=18% Similarity=0.261 Sum_probs=136.4
Q ss_pred EEEecCCCCCCCCchHHHHHHhCchHH---HHHHHcc-CChhHHHHHHHHHHHhCCCCHHHHHHHh-cCCCCChhHHHHH
Q 044617 6 VVFDFDRTLIDDDSDNWVVTQMGLTHL---FNQLRST-LPWNSLMDRMMKELHSQGKTVEDIANCL-RQCPLDSHVAAAI 80 (265)
Q Consensus 6 iifD~DGTL~ds~~~~~~~~~~~~~~~---~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~e~l 80 (265)
|+|||||||++.++...+++.++.+.. ...+... ..|...+......+.... .+++.+++ ....++||+.+++
T Consensus 2 ~~fDFDgTit~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~e~~~~~~~~~~~~~--~~~~~~~~~~~~~l~pg~~e~l 79 (214)
T TIGR03333 2 IICDFDGTITNNDNIISIMKQFAPPEWEALKDGVLSKTLSIQEGVGRMFGLLPSSL--KEEITSFVLETAEIREGFREFV 79 (214)
T ss_pred EEeccCCCCCcchhHHHHHHHhCcHHHHHHHHHHHcCCccHHHHHHHHHhhCCCch--HHHHHHHHHhcCcccccHHHHH
Confidence 799999999999998888877765432 2233332 346666655444332221 23454433 4578999999999
Q ss_pred HHHHHcCCcEEEEeCCCHHHHHHHHHhcCcccccceEEecCceecCCCceEE-eeccccccCCCcccccCCCCchHHHHH
Q 044617 81 KSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRI-LPYHDSTLSHHGCNLCPSNLCKGFVLD 159 (265)
Q Consensus 81 ~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~-~~~~~~~~kp~~~~~~~~~~~K~~~i~ 159 (265)
+.|+++|++++|+|++...+++.+++.++. .+.+++++..+++ +.+.. .|++....++. ..|.+|..+++
T Consensus 80 ~~l~~~g~~~~IvS~~~~~~i~~il~~~~~---~~~i~~n~~~~~~-~~~~~~~p~~~~~~~~~-----~cg~~K~~~l~ 150 (214)
T TIGR03333 80 AFINEHGIPFYVISGGMDFFVYPLLEGIVE---KDRIYCNEADFSN-EYIHIDWPHPCDGTCQN-----QCGCCKPSLIR 150 (214)
T ss_pred HHHHHCCCeEEEECCCcHHHHHHHHHhhCC---cccEEeceeEeeC-CeeEEeCCCCCcccccc-----CCCCCHHHHHH
Confidence 999999999999999999999999998754 2457777666653 33332 12221111111 12667998887
Q ss_pred HHHHhcCCCCceEEEEcCCCCCcccccCCCCCCeeeecCCCchhhhhhcCCCeeeEEEEeCCCHHHHHHHHHHHH
Q 044617 160 HVCTSFGCGKQRFIYLGDGRGDFCPTLKLRDCDFVMPRKNYPLWDRICSNPMLIKAKVHEWSSAEELKKILLHLI 234 (265)
Q Consensus 160 ~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~l~~~~ 234 (265)
.+.. .+++++|||||.+|+++|+ .+++++++. ... .. ++... ..+..|++|.|+.+.|+++.
T Consensus 151 ~~~~----~~~~~i~iGDg~~D~~~a~---~Ad~~~ar~-~l~-~~-~~~~~---~~~~~~~~f~di~~~l~~~~ 212 (214)
T TIGR03333 151 KLSE----PNDYHIVIGDSVTDVEAAK---QSDLCFARD-YLL-NE-CEELG---LNHAPFQDFYDVRKELENVK 212 (214)
T ss_pred HHhh----cCCcEEEEeCCHHHHHHHH---hCCeeEehH-HHH-HH-HHHcC---CCccCcCCHHHHHHHHHHHh
Confidence 6653 5678999999999999994 567788875 211 11 12121 23455799999999998664
No 34
>PRK11133 serB phosphoserine phosphatase; Provisional
Probab=99.85 E-value=3.5e-20 Score=158.40 Aligned_cols=201 Identities=13% Similarity=0.155 Sum_probs=133.7
Q ss_pred ceEEEEecCCCCCCCCchHHHHHHhCchHHHHHHHc---c--CChhHHHHHHHHHHHhCCCCHHHHHHHhcCCCCChhHH
Q 044617 3 DVVVVFDFDRTLIDDDSDNWVVTQMGLTHLFNQLRS---T--LPWNSLMDRMMKELHSQGKTVEDIANCLRQCPLDSHVA 77 (265)
Q Consensus 3 ~k~iifD~DGTL~ds~~~~~~~~~~~~~~~~~~~~~---~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 77 (265)
+++|+|||||||+..+....+++.+|.......+.. . ..+......... ...+...+.+.......+++||+.
T Consensus 110 ~~LvvfDmDGTLI~~e~i~eia~~~g~~~~v~~it~~~m~Geldf~esl~~rv~--~l~g~~~~il~~v~~~l~l~pGa~ 187 (322)
T PRK11133 110 PGLLVMDMDSTAIQIECIDEIAKLAGTGEEVAEVTERAMRGELDFEASLRQRVA--TLKGADANILQQVRENLPLMPGLT 187 (322)
T ss_pred CCEEEEECCCCCcchHHHHHHHHHhCCchHHHHHHHHHHcCCcCHHHHHHHHHH--HhCCCCHHHHHHHHHhCCCChhHH
Confidence 589999999999988877888888887655433322 1 233332222111 123445455555566789999999
Q ss_pred HHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCcccccceEEecCceecCCCceEEeecc-ccccCCCcccccCCCCchHH
Q 044617 78 AAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRILPYH-DSTLSHHGCNLCPSNLCKGF 156 (265)
Q Consensus 78 e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~~~~-~~~~kp~~~~~~~~~~~K~~ 156 (265)
++|+.|+++|++++|+|++...+++.+++++|+. .++++...+. +|.++..... ... +.+|++
T Consensus 188 elL~~Lk~~G~~~aIvSgg~~~~~~~l~~~Lgld----~~~an~lei~-dg~ltg~v~g~iv~-----------~k~K~~ 251 (322)
T PRK11133 188 ELVLKLQALGWKVAIASGGFTYFADYLRDKLRLD----AAVANELEIM-DGKLTGNVLGDIVD-----------AQYKAD 251 (322)
T ss_pred HHHHHHHHcCCEEEEEECCcchhHHHHHHHcCCC----eEEEeEEEEE-CCEEEeEecCccCC-----------cccHHH
Confidence 9999999999999999999999999999999975 3444433332 3433321111 011 234999
Q ss_pred HHHHHHHhcCCCCceEEEEcCCCCCcccccCCCCCCeeeecCCCchhhhhhcCCCeeeEEEEeCCCHHHHHHHHH
Q 044617 157 VLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRDCDFVMPRKNYPLWDRICSNPMLIKAKVHEWSSAEELKKILL 231 (265)
Q Consensus 157 ~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~l~ 231 (265)
.++++++++|++++++++|||+.||+.|++.+| +.++.... ..+++ .++..+ .+.+...++-+|.
T Consensus 252 ~L~~la~~lgi~~~qtIaVGDg~NDl~m~~~AG---lgiA~nAk---p~Vk~---~Ad~~i-~~~~l~~~l~~~~ 316 (322)
T PRK11133 252 TLTRLAQEYEIPLAQTVAIGDGANDLPMIKAAG---LGIAYHAK---PKVNE---QAQVTI-RHADLMGVLCILS 316 (322)
T ss_pred HHHHHHHHcCCChhhEEEEECCHHHHHHHHHCC---CeEEeCCC---HHHHh---hCCEEe-cCcCHHHHHHHhc
Confidence 999999999999999999999999999996544 44443221 22332 233433 2355666665553
No 35
>TIGR01990 bPGM beta-phosphoglucomutase. The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state.
Probab=99.85 E-value=4.4e-21 Score=152.49 Aligned_cols=163 Identities=12% Similarity=0.162 Sum_probs=110.4
Q ss_pred EEEEecCCCCCCCCch-----HHHHHHhCchHHHH--HHHccCChhHHHHHHHHHHHhCCCCHHH-----------HHHH
Q 044617 5 VVVFDFDRTLIDDDSD-----NWVVTQMGLTHLFN--QLRSTLPWNSLMDRMMKELHSQGKTVED-----------IANC 66 (265)
Q Consensus 5 ~iifD~DGTL~ds~~~-----~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~ 66 (265)
+|+||+||||+|+... ..+++.+|.+.... ..+...........+.... ....+.+. +.+.
T Consensus 1 ~iiFD~DGTL~ds~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 79 (185)
T TIGR01990 1 AVIFDLDGVITDTAEYHYLAWKALADELGIPFDEEFNESLKGVSREDSLERILDLG-GKKYSEEEKEELAERKNDYYVEL 79 (185)
T ss_pred CeEEcCCCccccChHHHHHHHHHHHHHcCCCCCHHHHHHhcCCChHHHHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHH
Confidence 4899999999999753 44556666552111 1111122222222222111 00111111 1111
Q ss_pred h---cCCCCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCcccccceEEecCceecCCCceEEeeccccccCCC
Q 044617 67 L---RQCPLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRILPYHDSTLSHH 143 (265)
Q Consensus 67 ~---~~~~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp~ 143 (265)
+ ....++||+.++|+.|+++|++++|+||+.. ....++.+|+..+|+.+++.. .....||
T Consensus 80 ~~~~~~~~~~pg~~~~L~~L~~~g~~~~i~s~~~~--~~~~l~~~~l~~~f~~~~~~~--------------~~~~~kp- 142 (185)
T TIGR01990 80 LKELTPADVLPGIKNLLDDLKKNNIKIALASASKN--APTVLEKLGLIDYFDAIVDPA--------------EIKKGKP- 142 (185)
T ss_pred HHhcCCcccCccHHHHHHHHHHCCCeEEEEeCCcc--HHHHHHhcCcHhhCcEEEehh--------------hcCCCCC-
Confidence 1 2347899999999999999999999998743 467889999999999988752 1122356
Q ss_pred cccccCCCCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccCCCCCCeee
Q 044617 144 GCNLCPSNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRDCDFVM 195 (265)
Q Consensus 144 ~~~~~~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~~~~~~ 195 (265)
+++.++.++++++++++++++|||+.+|+.+|+++|+..+++
T Consensus 143 ----------~p~~~~~~~~~~~~~~~~~v~vgD~~~di~aA~~aG~~~i~v 184 (185)
T TIGR01990 143 ----------DPEIFLAAAEGLGVSPSECIGIEDAQAGIEAIKAAGMFAVGV 184 (185)
T ss_pred ----------ChHHHHHHHHHcCCCHHHeEEEecCHHHHHHHHHcCCEEEec
Confidence 899999999999999999999999999999999888765543
No 36
>PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional
Probab=99.85 E-value=1.4e-20 Score=150.02 Aligned_cols=164 Identities=12% Similarity=0.133 Sum_probs=113.4
Q ss_pred ceEEEEecCCCCCCCCch-----HHHHHHhCchHHHHHHHccC---ChhHHHHHHHHHHHhCCCCHHHH--------HHH
Q 044617 3 DVVVVFDFDRTLIDDDSD-----NWVVTQMGLTHLFNQLRSTL---PWNSLMDRMMKELHSQGKTVEDI--------ANC 66 (265)
Q Consensus 3 ~k~iifD~DGTL~ds~~~-----~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~--------~~~ 66 (265)
+++|+|||||||+||... ..++.+.|.+.......... .|. ....+.... ......+.+ ...
T Consensus 5 ~~~viFD~DGTLiDs~~~~~~a~~~~~~~~g~~~~~~~~~~~~g~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 82 (188)
T PRK10725 5 YAGLIFDMDGTILDTEPTHRKAWREVLGRYGLQFDEQAMVALNGSPTWR-IAQAIIELN-QADLDPHALAREKTEAVKSM 82 (188)
T ss_pred ceEEEEcCCCcCccCHHHHHHHHHHHHHHcCCCCCHHHHHHhcCCCHHH-HHHHHHHHh-CCCCCHHHHHHHHHHHHHHH
Confidence 689999999999999642 55666666642211111111 111 112221111 111121111 111
Q ss_pred -hcCCCCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCcccccceEEecCceecCCCceEEeeccccccCCCcc
Q 044617 67 -LRQCPLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRILPYHDSTLSHHGC 145 (265)
Q Consensus 67 -~~~~~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp~~~ 145 (265)
.....++|+ .++|..|++. ++++|+||+....+...++++|+..+|+.+++.+ .....||
T Consensus 83 ~~~~~~~~~~-~e~L~~L~~~-~~l~I~T~~~~~~~~~~l~~~~l~~~fd~i~~~~--------------~~~~~KP--- 143 (188)
T PRK10725 83 LLDSVEPLPL-IEVVKAWHGR-RPMAVGTGSESAIAEALLAHLGLRRYFDAVVAAD--------------DVQHHKP--- 143 (188)
T ss_pred HhccCCCccH-HHHHHHHHhC-CCEEEEcCCchHHHHHHHHhCCcHhHceEEEehh--------------hccCCCC---
Confidence 234567786 5899999875 8999999999999999999999999999988852 1122356
Q ss_pred cccCCCCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccCCCCCCeee
Q 044617 146 NLCPSNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRDCDFVM 195 (265)
Q Consensus 146 ~~~~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~~~~~~ 195 (265)
+|..+.++++++|++|+++++|||+.+|+++|+++|...+++
T Consensus 144 --------~p~~~~~~~~~~~~~~~~~l~igDs~~di~aA~~aG~~~i~~ 185 (188)
T PRK10725 144 --------APDTFLRCAQLMGVQPTQCVVFEDADFGIQAARAAGMDAVDV 185 (188)
T ss_pred --------ChHHHHHHHHHcCCCHHHeEEEeccHhhHHHHHHCCCEEEee
Confidence 899999999999999999999999999999998877765544
No 37
>PLN02940 riboflavin kinase
Probab=99.85 E-value=1.2e-20 Score=165.59 Aligned_cols=169 Identities=12% Similarity=0.090 Sum_probs=119.8
Q ss_pred ceEEEEecCCCCCCCCch-----HHHHHHhCchHHHHHHHcc--CChhHHHHHHHHHHHhCCCCHHH--------HHHHh
Q 044617 3 DVVVVFDFDRTLIDDDSD-----NWVVTQMGLTHLFNQLRST--LPWNSLMDRMMKELHSQGKTVED--------IANCL 67 (265)
Q Consensus 3 ~k~iifD~DGTL~ds~~~-----~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~ 67 (265)
+++|+||+||||+|+... ..+++++|.+....+.... .........+..... .....++ +.+..
T Consensus 11 ik~VIFDlDGTLvDt~~~~~~a~~~~~~~~G~~~~~~~~~~~~G~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 89 (382)
T PLN02940 11 VSHVILDLDGTLLNTDGIVSDVLKAFLVKYGKQWDGREAQKIVGKTPLEAAATVVEDYG-LPCSTDEFNSEITPLLSEQW 89 (382)
T ss_pred CCEEEECCcCcCCcCHHHHHHHHHHHHHHcCCCCCHHHHHHhcCCCHHHHHHHHHHHhC-CCCCHHHHHHHHHHHHHHHH
Confidence 678999999999999653 4455666654222222111 122222222222111 1111111 12233
Q ss_pred cCCCCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHH-hcCcccccceEEecCceecCCCceEEeeccccccCCCccc
Q 044617 68 RQCPLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIME-HHGLLGCFSEIYTNPTYVDEQGRLRILPYHDSTLSHHGCN 146 (265)
Q Consensus 68 ~~~~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~-~~gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp~~~~ 146 (265)
....++||+.++|++|+++|++++|+||+....+...++ .+|+.++|+.+++.+ .....||
T Consensus 90 ~~~~l~pGv~elL~~Lk~~g~~l~IvTn~~~~~~~~~l~~~~gl~~~Fd~ii~~d--------------~v~~~KP---- 151 (382)
T PLN02940 90 CNIKALPGANRLIKHLKSHGVPMALASNSPRANIEAKISCHQGWKESFSVIVGGD--------------EVEKGKP---- 151 (382)
T ss_pred ccCCCCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhccChHhhCCEEEehh--------------hcCCCCC----
Confidence 467889999999999999999999999999999998887 789999999998852 1122456
Q ss_pred ccCCCCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccCCCCCCeeeec
Q 044617 147 LCPSNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRDCDFVMPR 197 (265)
Q Consensus 147 ~~~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~~~~~~~~ 197 (265)
+++.+..+++++|++|+++++|||+.+|+.+|+++|...+++..
T Consensus 152 -------~p~~~~~a~~~lgv~p~~~l~VGDs~~Di~aA~~aGi~~I~v~~ 195 (382)
T PLN02940 152 -------SPDIFLEAAKRLNVEPSNCLVIEDSLPGVMAGKAAGMEVIAVPS 195 (382)
T ss_pred -------CHHHHHHHHHHcCCChhHEEEEeCCHHHHHHHHHcCCEEEEECC
Confidence 89999999999999999999999999999999998876555543
No 38
>PRK10748 flavin mononucleotide phosphatase; Provisional
Probab=99.85 E-value=3.1e-20 Score=153.52 Aligned_cols=128 Identities=12% Similarity=0.100 Sum_probs=96.7
Q ss_pred cCCCCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCcccccceEEecCceecCCCceEEeeccccccCCCcccc
Q 044617 68 RQCPLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRILPYHDSTLSHHGCNL 147 (265)
Q Consensus 68 ~~~~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp~~~~~ 147 (265)
....++||+.++|+.|++. ++++|+||+... ++.+|+..+|+.+++++ .....||
T Consensus 110 ~~~~~~~gv~~~L~~L~~~-~~l~i~Tn~~~~-----~~~~gl~~~fd~i~~~~--------------~~~~~KP----- 164 (238)
T PRK10748 110 SRIDVPQATHDTLKQLAKK-WPLVAITNGNAQ-----PELFGLGDYFEFVLRAG--------------PHGRSKP----- 164 (238)
T ss_pred hcCCCCccHHHHHHHHHcC-CCEEEEECCCch-----HHHCCcHHhhceeEecc--------------cCCcCCC-----
Confidence 4578899999999999985 999999998765 37789999999998852 1122356
Q ss_pred cCCCCchHHHHHHHHHhcCCCCceEEEEcCC-CCCcccccCCCCCCeeeecCCCchhhhhhcCCCeeeEEEEeCCCHHHH
Q 044617 148 CPSNLCKGFVLDHVCTSFGCGKQRFIYLGDG-RGDFCPTLKLRDCDFVMPRKNYPLWDRICSNPMLIKAKVHEWSSAEEL 226 (265)
Q Consensus 148 ~~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~-~~Di~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el 226 (265)
++.++..+++++|++|+++++|||+ ..|+.+|+++|+..+++.+.+........ ....++..+ .+..||
T Consensus 165 ------~p~~~~~a~~~~~~~~~~~~~VGD~~~~Di~~A~~aG~~~i~v~~~~~~~~~~~~-~~~~p~~~i---~~l~el 234 (238)
T PRK10748 165 ------FSDMYHLAAEKLNVPIGEILHVGDDLTTDVAGAIRCGMQACWINPENGDLMQTWD-SRLLPHIEI---SRLASL 234 (238)
T ss_pred ------cHHHHHHHHHHcCCChhHEEEEcCCcHHHHHHHHHCCCeEEEEcCCCcccccccc-ccCCCCEEE---CCHHHH
Confidence 8999999999999999999999999 59999999989887777654322111010 112344556 888888
Q ss_pred HHHH
Q 044617 227 KKIL 230 (265)
Q Consensus 227 ~~~l 230 (265)
.++|
T Consensus 235 ~~~~ 238 (238)
T PRK10748 235 TSLI 238 (238)
T ss_pred HhhC
Confidence 7653
No 39
>PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated
Probab=99.84 E-value=2.2e-20 Score=168.35 Aligned_cols=129 Identities=15% Similarity=0.148 Sum_probs=101.2
Q ss_pred CCCCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCcccccceEEecCceecCCCceEEeeccccccCCCccccc
Q 044617 69 QCPLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRILPYHDSTLSHHGCNLC 148 (265)
Q Consensus 69 ~~~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp~~~~~~ 148 (265)
...++||+.++|++|+++|++++|+||+....+...++++|+..+|+.+++.+. . ..+|
T Consensus 328 ~~~l~pG~~e~L~~Lk~~g~~l~IvS~~~~~~~~~~l~~~~l~~~f~~i~~~d~------------v---~~~~------ 386 (459)
T PRK06698 328 KGALYPNVKEIFTYIKENNCSIYIASNGLTEYLRAIVSYYDLDQWVTETFSIEQ------------I---NSLN------ 386 (459)
T ss_pred CCCcCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHCCcHhhcceeEecCC------------C---CCCC------
Confidence 467899999999999999999999999999999999999999999999888521 0 0123
Q ss_pred CCCCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccCCCCCCeeeecCCCchhhhhhcCCCeeeEEEEeCCCHHHHHH
Q 044617 149 PSNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRDCDFVMPRKNYPLWDRICSNPMLIKAKVHEWSSAEELKK 228 (265)
Q Consensus 149 ~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~ 228 (265)
||..+..++++++ +++|++|||+.+|+.+|+++|...+++.. ++...... ..++..+ +++.||.+
T Consensus 387 -----kP~~~~~al~~l~--~~~~v~VGDs~~Di~aAk~AG~~~I~v~~-~~~~~~~~----~~~d~~i---~~l~el~~ 451 (459)
T PRK06698 387 -----KSDLVKSILNKYD--IKEAAVVGDRLSDINAAKDNGLIAIGCNF-DFAQEDEL----AQADIVI---DDLLELKG 451 (459)
T ss_pred -----CcHHHHHHHHhcC--cceEEEEeCCHHHHHHHHHCCCeEEEEeC-CCCccccc----CCCCEEe---CCHHHHHH
Confidence 7888999998864 68999999999999999998887666654 33322211 1234455 89999988
Q ss_pred HHHHH
Q 044617 229 ILLHL 233 (265)
Q Consensus 229 ~l~~~ 233 (265)
++..+
T Consensus 452 ~l~~~ 456 (459)
T PRK06698 452 ILSTV 456 (459)
T ss_pred HHHHH
Confidence 77554
No 40
>COG4359 Uncharacterized conserved protein [Function unknown]
Probab=99.84 E-value=1.1e-19 Score=137.67 Aligned_cols=210 Identities=18% Similarity=0.253 Sum_probs=150.3
Q ss_pred CCceEEEEecCCCCCCCCchHHHHHHhCchHHH---HHHHccCChhHHHHHHHHHHHhCCCCHHHHHHHh-cCCCCChhH
Q 044617 1 MADVVVVFDFDRTLIDDDSDNWVVTQMGLTHLF---NQLRSTLPWNSLMDRMMKELHSQGKTVEDIANCL-RQCPLDSHV 76 (265)
Q Consensus 1 M~~k~iifD~DGTL~ds~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~ 76 (265)
|+.-.|+.|+|||++-.++...+...+|.++.. ..++... ....+.+.+.+...+.+.+++.+.+ ..+.+.||.
T Consensus 1 mkk~vi~sDFDGTITl~Ds~~~itdtf~~~e~k~l~~~vls~t--iS~rd~~g~mf~~i~~s~~Eile~llk~i~Idp~f 78 (220)
T COG4359 1 MKKPVIFSDFDGTITLNDSNDYITDTFGPGEWKALKDGVLSKT--ISFRDGFGRMFGSIHSSLEEILEFLLKDIKIDPGF 78 (220)
T ss_pred CCceEEEecCCCceEecchhHHHHhccCchHHHHHHHHHhhCc--eeHHHHHHHHHHhcCCCHHHHHHHHHhhcccCccH
Confidence 666678889999999999988999999987643 3333221 1123334444444556666665554 469999999
Q ss_pred HHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCccccc--ceEEecCceecCCCceEEeeccccccCCCcccccCCCCch
Q 044617 77 AAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCF--SEIYTNPTYVDEQGRLRILPYHDSTLSHHGCNLCPSNLCK 154 (265)
Q Consensus 77 ~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f--~~i~~~~~~~d~~~~~~~~~~~~~~~kp~~~~~~~~~~~K 154 (265)
++++++.++++++++++|++..+++..+++.++-.+.+ -.++++...++.+|...+.... -.+.|.+|
T Consensus 79 Kef~e~ike~di~fiVvSsGm~~fI~~lfe~ivgke~i~~idi~sn~~~ih~dg~h~i~~~~----------ds~fG~dK 148 (220)
T COG4359 79 KEFVEWIKEHDIPFIVVSSGMDPFIYPLFEGIVGKERIYCIDIVSNNDYIHIDGQHSIKYTD----------DSQFGHDK 148 (220)
T ss_pred HHHHHHHHHcCCCEEEEeCCCchHHHHHHHhhccccceeeeEEeecCceEcCCCceeeecCC----------ccccCCCc
Confidence 99999999999999999999999999999987633222 2577777777766654432111 12446679
Q ss_pred HHHHHHHHHhcCCCCceEEEEcCCCCCcccccCCCCCCeeeecCCCchhhhhhcCCCeeeEEEEeCCCHHHHHHHHHHHH
Q 044617 155 GFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRDCDFVMPRKNYPLWDRICSNPMLIKAKVHEWSSAEELKKILLHLI 234 (265)
Q Consensus 155 ~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~l~~~~ 234 (265)
+..+..+.+. ++.++|.|||.+|+.|| ...+..||+. ...+. |+.. ...+..|++|.||++.+++.+
T Consensus 149 ~~vI~~l~e~----~e~~fy~GDsvsDlsaa---klsDllFAK~--~L~ny-c~eq---n~~f~~fe~F~eIlk~iekvl 215 (220)
T COG4359 149 SSVIHELSEP----NESIFYCGDSVSDLSAA---KLSDLLFAKD--DLLNY-CREQ---NLNFLEFETFYEILKEIEKVL 215 (220)
T ss_pred chhHHHhhcC----CceEEEecCCcccccHh---hhhhhHhhHH--HHHHH-HHHc---CCCCcccccHHHHHHHHHHHH
Confidence 9999988875 47799999999999999 6788999975 22222 2221 134556799999999999886
Q ss_pred H
Q 044617 235 G 235 (265)
Q Consensus 235 ~ 235 (265)
+
T Consensus 216 ~ 216 (220)
T COG4359 216 E 216 (220)
T ss_pred h
Confidence 5
No 41
>COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=99.84 E-value=3.7e-20 Score=149.46 Aligned_cols=169 Identities=18% Similarity=0.212 Sum_probs=126.7
Q ss_pred CceEEEEecCCCCCCCCchHHHHHHhCchHHHHHHHcc-C----ChhHHHHHHHHHHHhCCCCHHHHHHHhcC-CCCChh
Q 044617 2 ADVVVVFDFDRTLIDDDSDNWVVTQMGLTHLFNQLRST-L----PWNSLMDRMMKELHSQGKTVEDIANCLRQ-CPLDSH 75 (265)
Q Consensus 2 ~~k~iifD~DGTL~ds~~~~~~~~~~~~~~~~~~~~~~-~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g 75 (265)
++++++|||||||++......+....|..........+ + .+.......... -.|.+.+.+.++... .+++||
T Consensus 4 ~~~L~vFD~D~TLi~~~~~~~~~~~~g~~~~v~~~t~~~~~~~~~~~~~~~~~v~~--l~g~~~~~v~~~~~~~~~l~~g 81 (212)
T COG0560 4 MKKLAVFDLDGTLINAELIDELARGAGVGEEVLAITERAMRGELDFEESLRLRVAL--LKGLPVEVLEEVREEFLRLTPG 81 (212)
T ss_pred ccceEEEecccchhhHHHHHHHHHHhCCHHHHHHHHHHHhcccccHHHHHHHHHHH--hCCCCHHHHHHHHHhcCcCCcc
Confidence 57899999999999976667777788877654443322 1 233333332222 247777888888877 899999
Q ss_pred HHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCcccccceEEecCceecCCCceEEeeccccccCCCcccccCCCCchH
Q 044617 76 VAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRILPYHDSTLSHHGCNLCPSNLCKG 155 (265)
Q Consensus 76 ~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp~~~~~~~~~~~K~ 155 (265)
+.+++++++++|++++|+|++...+++++.+.+|++. ++++....++ |.++...... . ..+.+|.
T Consensus 82 a~elv~~lk~~G~~v~iiSgg~~~lv~~ia~~lg~d~----~~an~l~~~d-G~ltG~v~g~------~----~~~~~K~ 146 (212)
T COG0560 82 AEELVAALKAAGAKVVIISGGFTFLVEPIAERLGIDY----VVANELEIDD-GKLTGRVVGP------I----CDGEGKA 146 (212)
T ss_pred HHHHHHHHHHCCCEEEEEcCChHHHHHHHHHHhCCch----heeeEEEEeC-CEEeceeeee------e----cCcchHH
Confidence 9999999999999999999999999999999999764 4555554554 4444321111 0 1134599
Q ss_pred HHHHHHHHhcCCCCceEEEEcCCCCCcccccC
Q 044617 156 FVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLK 187 (265)
Q Consensus 156 ~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~ 187 (265)
..+..+++++|+++++++++|||.||+.|...
T Consensus 147 ~~l~~~~~~~g~~~~~~~a~gDs~nDlpml~~ 178 (212)
T COG0560 147 KALRELAAELGIPLEETVAYGDSANDLPMLEA 178 (212)
T ss_pred HHHHHHHHHcCCCHHHeEEEcCchhhHHHHHh
Confidence 99999999999999999999999999999854
No 42
>TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase. Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes.
Probab=99.84 E-value=3.5e-20 Score=149.61 Aligned_cols=98 Identities=14% Similarity=0.161 Sum_probs=83.7
Q ss_pred CCCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCcccccceEEecCceecCCCceEEeeccccccCCCcccccC
Q 044617 70 CPLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRILPYHDSTLSHHGCNLCP 149 (265)
Q Consensus 70 ~~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp~~~~~~~ 149 (265)
..++||+.++|..|+++|++++|+||+... +...++.+|+..+|+.++++. .....||
T Consensus 104 ~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~-~~~~l~~~~l~~~fd~i~~s~--------------~~~~~KP------- 161 (203)
T TIGR02252 104 WQVYPDAIKLLKDLRERGLILGVISNFDSR-LRGLLEALGLLEYFDFVVTSY--------------EVGAEKP------- 161 (203)
T ss_pred ceeCcCHHHHHHHHHHCCCEEEEEeCCchh-HHHHHHHCCcHHhcceEEeec--------------ccCCCCC-------
Confidence 467999999999999999999999998765 577889999999999988751 1123456
Q ss_pred CCCchHHHHHHHHHhcCCCCceEEEEcCCC-CCcccccCCCCCCe
Q 044617 150 SNLCKGFVLDHVCTSFGCGKQRFIYLGDGR-GDFCPTLKLRDCDF 193 (265)
Q Consensus 150 ~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~-~Di~~a~~~~~~~~ 193 (265)
++..+.++++++|++|+++++|||+. +|+.+|+++|...+
T Consensus 162 ----~~~~~~~~~~~~~~~~~~~~~IgD~~~~Di~~A~~aG~~~i 202 (203)
T TIGR02252 162 ----DPKIFQEALERAGISPEEALHIGDSLRNDYQGARAAGWRAL 202 (203)
T ss_pred ----CHHHHHHHHHHcCCChhHEEEECCCchHHHHHHHHcCCeee
Confidence 78999999999999999999999997 89999988777544
No 43
>TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein. This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338).
Probab=99.83 E-value=2.4e-19 Score=144.10 Aligned_cols=197 Identities=16% Similarity=0.136 Sum_probs=130.2
Q ss_pred eEEEEecCCCCCCCCchHHHHHHhCchHHHHHHHccCChhHHHHHHHHHHHhCCCCHHHHHHHhcCCCCChhHHHHHHHH
Q 044617 4 VVVVFDFDRTLIDDDSDNWVVTQMGLTHLFNQLRSTLPWNSLMDRMMKELHSQGKTVEDIANCLRQCPLDSHVAAAIKSA 83 (265)
Q Consensus 4 k~iifD~DGTL~ds~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~e~l~~l 83 (265)
++++|||||||++. ....+....|.............+..+...-...+...|.+.+.+.+.+....++||+.++|+.+
T Consensus 2 ~la~FDlD~TLi~~-~w~~~~~~~g~~~~~~~~~~~~~~~~~~~~r~~ll~~~g~~~~~i~~~~~~i~l~pga~ell~~l 80 (203)
T TIGR02137 2 EIACLDLEGVLVPE-IWIAFAEKTGIDALKATTRDIPDYDVLMKQRLRILDEHGLKLGDIQEVIATLKPLEGAVEFVDWL 80 (203)
T ss_pred eEEEEeCCcccHHH-HHHHHHHHcCCcHHHHHhcCCcCHHHHHHHHHHHHHHCCCCHHHHHHHHHhCCCCccHHHHHHHH
Confidence 78999999999976 46667777775433211111123455555444444445888888888888889999999999999
Q ss_pred HHcCCcEEEEeCCCHHHHHHHHHhcCcccccceEEecCceecCCCceEEeeccccccCCCcccccCCCCchHHHHHHHHH
Q 044617 84 HSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRILPYHDSTLSHHGCNLCPSNLCKGFVLDHVCT 163 (265)
Q Consensus 84 ~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp~~~~~~~~~~~K~~~i~~~~~ 163 (265)
+++ ++++|+|++...++.++++++|+.. +++++..+++.|.++..... . +.+|...++.+ +
T Consensus 81 k~~-~~~~IVS~~~~~~~~~il~~lgi~~----~~an~l~~~~~g~~tG~~~~---~----------~~~K~~~l~~l-~ 141 (203)
T TIGR02137 81 RER-FQVVILSDTFYEFSQPLMRQLGFPT----LLCHKLEIDDSDRVVGYQLR---Q----------KDPKRQSVIAF-K 141 (203)
T ss_pred HhC-CeEEEEeCChHHHHHHHHHHcCCch----hhceeeEEecCCeeECeeec---C----------cchHHHHHHHH-H
Confidence 997 5999999999999999999999764 45554445432443321110 1 12377777777 4
Q ss_pred hcCCCCceEEEEcCCCCCcccccCCCCCCeeeecCCCchhhhhhcCCCeeeEEEEeCCCHHHHHHHHHHH
Q 044617 164 SFGCGKQRFIYLGDGRGDFCPTLKLRDCDFVMPRKNYPLWDRICSNPMLIKAKVHEWSSAEELKKILLHL 233 (265)
Q Consensus 164 ~~gi~~~~~v~vGD~~~Di~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~l~~~ 233 (265)
+.+ .++++||||.||+.+++. ++..++....+. ..+..+. +..+.+..||.+.+...
T Consensus 142 ~~~---~~~v~vGDs~nDl~ml~~---Ag~~ia~~ak~~--~~~~~~~-----~~~~~~~~~~~~~~~~~ 198 (203)
T TIGR02137 142 SLY---YRVIAAGDSYNDTTMLSE---AHAGILFHAPEN--VIREFPQ-----FPAVHTYEDLKREFLKA 198 (203)
T ss_pred hhC---CCEEEEeCCHHHHHHHHh---CCCCEEecCCHH--HHHhCCC-----CCcccCHHHHHHHHHHH
Confidence 554 379999999999999955 444444332222 2222222 12237788888877654
No 44
>TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509).
Probab=99.83 E-value=7.1e-20 Score=145.54 Aligned_cols=102 Identities=12% Similarity=0.141 Sum_probs=84.0
Q ss_pred CCCCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCcccccceEEecCceecCCCceEEeeccccccCCCccccc
Q 044617 69 QCPLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRILPYHDSTLSHHGCNLC 148 (265)
Q Consensus 69 ~~~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp~~~~~~ 148 (265)
...+++|+.++|+.|+ ++++|+||+....+...++.+|+..+|+.+++.+.. + ......||
T Consensus 82 ~~~~~~g~~~~L~~L~---~~~~i~Tn~~~~~~~~~l~~~gl~~~fd~i~~~~~~----~------~~~~~~KP------ 142 (184)
T TIGR01993 82 KLKPDPELRNLLLRLP---GRKIIFTNGDRAHARRALNRLGIEDCFDGIFCFDTA----N------PDYLLPKP------ 142 (184)
T ss_pred hCCCCHHHHHHHHhCC---CCEEEEeCCCHHHHHHHHHHcCcHhhhCeEEEeecc----c------CccCCCCC------
Confidence 3567999999999997 479999999999999999999999999998885210 0 00001256
Q ss_pred CCCCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccCCCCCCee
Q 044617 149 PSNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRDCDFV 194 (265)
Q Consensus 149 ~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~~~~~ 194 (265)
+|.+++++++++|++|+++++|||+..|+.+|+++|...++
T Consensus 143 -----~p~~~~~~~~~~~~~~~~~l~vgD~~~di~aA~~~G~~~i~ 183 (184)
T TIGR01993 143 -----SPQAYEKALREAGVDPERAIFFDDSARNIAAAKALGMKTVL 183 (184)
T ss_pred -----CHHHHHHHHHHhCCCccceEEEeCCHHHHHHHHHcCCEEee
Confidence 89999999999999999999999999999999988776543
No 45
>TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like. Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences.
Probab=99.83 E-value=8.9e-20 Score=143.94 Aligned_cols=169 Identities=25% Similarity=0.308 Sum_probs=114.1
Q ss_pred EEEEecCCCCCCCCchHHHHHHh-CchHHHHHHHcc--CChhHHHHHHHHHHHhC-CCCHHHHHH-H-hcCCCCChhHHH
Q 044617 5 VVVFDFDRTLIDDDSDNWVVTQM-GLTHLFNQLRST--LPWNSLMDRMMKELHSQ-GKTVEDIAN-C-LRQCPLDSHVAA 78 (265)
Q Consensus 5 ~iifD~DGTL~ds~~~~~~~~~~-~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~-~~~~~~~~~-~-~~~~~~~~g~~e 78 (265)
+++|||||||+..++...+++.+ +.......+... .++..+.+.+...+... +...+++.+ + .....++||+.+
T Consensus 1 l~~fD~DgTl~~~~s~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 80 (177)
T TIGR01488 1 LAIFDFDGTLTRQDSLIDLLAKLLGTNDEVIELTRLAPSGRISFEDALGRRLALLHRSRSEEVAKEFLARQVALRPGARE 80 (177)
T ss_pred CEEecCccccccchhhHHHHHHHhCChHHHHHHHHHHHCCCCCHHHHHHHHHHHhCCCCHHHHHHHHHHhcCCcCcCHHH
Confidence 48999999999998855444443 432322222211 12323333333332222 333234443 3 356778999999
Q ss_pred HHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCcccccceEEecCceecCCCceEEeeccccccCCCcccccCCCCchHHHH
Q 044617 79 AIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRILPYHDSTLSHHGCNLCPSNLCKGFVL 158 (265)
Q Consensus 79 ~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp~~~~~~~~~~~K~~~i 158 (265)
+++.++++|++++|+|++...+++.+++++|+.. ++++...++++|.++.. ...+.++.+.+|+..+
T Consensus 81 ~l~~l~~~g~~~~ivS~~~~~~i~~~~~~~g~~~----~~~~~~~~~~~g~~~g~---------~~~~~~~~~~~K~~~l 147 (177)
T TIGR01488 81 LISWLKERGIDTVIVSGGFDFFVEPVAEKLGIDD----VFANRLEFDDNGLLTGP---------IEGQVNPEGECKGKVL 147 (177)
T ss_pred HHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCch----heeeeEEECCCCEEeCc---------cCCcccCCcchHHHHH
Confidence 9999999999999999999999999999999764 45554445444543311 0111124466799999
Q ss_pred HHHHHhcCCCCceEEEEcCCCCCccccc
Q 044617 159 DHVCTSFGCGKQRFIYLGDGRGDFCPTL 186 (265)
Q Consensus 159 ~~~~~~~gi~~~~~v~vGD~~~Di~~a~ 186 (265)
+.++++.+++++++++||||.+|+.+++
T Consensus 148 ~~~~~~~~~~~~~~~~iGDs~~D~~~~~ 175 (177)
T TIGR01488 148 KELLEESKITLKKIIAVGDSVNDLPMLK 175 (177)
T ss_pred HHHHHHhCCCHHHEEEEeCCHHHHHHHh
Confidence 9999999999999999999999999984
No 46
>COG1011 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=99.83 E-value=5.9e-19 Score=144.88 Aligned_cols=130 Identities=18% Similarity=0.199 Sum_probs=106.2
Q ss_pred CCCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCcccccceEEecCceecCCCceEEeeccccccCCCcccccC
Q 044617 70 CPLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRILPYHDSTLSHHGCNLCP 149 (265)
Q Consensus 70 ~~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp~~~~~~~ 149 (265)
.+.+|++.+.|+.++++ ++++|+||+........++.+|+.++|+.++.+ ...+..||
T Consensus 98 ~~~~~~~~~~L~~l~~~-~~l~ilTNg~~~~~~~~l~~~gl~~~Fd~v~~s--------------~~~g~~KP------- 155 (229)
T COG1011 98 LPDYPEALEALKELGKK-YKLGILTNGARPHQERKLRQLGLLDYFDAVFIS--------------EDVGVAKP------- 155 (229)
T ss_pred CccChhHHHHHHHHHhh-ccEEEEeCCChHHHHHHHHHcCChhhhheEEEe--------------cccccCCC-------
Confidence 78899999999999998 999999999999999999999999999999985 22234466
Q ss_pred CCCchHHHHHHHHHhcCCCCceEEEEcCCC-CCcccccCCCCCCeeeecCCCchhhhhhcCCCeeeEEEEeCCCHHHHHH
Q 044617 150 SNLCKGFVLDHVCTSFGCGKQRFIYLGDGR-GDFCPTLKLRDCDFVMPRKNYPLWDRICSNPMLIKAKVHEWSSAEELKK 228 (265)
Q Consensus 150 ~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~-~Di~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~ 228 (265)
.+.+++.+++++|++|+++++|||+. ||+.+|+++|+.++++...+... ......++..+ .++.+|.+
T Consensus 156 ----~~~~f~~~~~~~g~~p~~~l~VgD~~~~di~gA~~~G~~~vwi~~~~~~~----~~~~~~~~~~i---~~l~~l~~ 224 (229)
T COG1011 156 ----DPEIFEYALEKLGVPPEEALFVGDSLENDILGARALGMKTVWINRGGKPL----PDALEAPDYEI---SSLAELLD 224 (229)
T ss_pred ----CcHHHHHHHHHcCCCcceEEEECCChhhhhHHHHhcCcEEEEECCCCCCC----CCCccCCceEE---cCHHHHHH
Confidence 78999999999999999999999995 88899999999988877664332 11112234455 88888888
Q ss_pred HHHH
Q 044617 229 ILLH 232 (265)
Q Consensus 229 ~l~~ 232 (265)
.+..
T Consensus 225 ~~~~ 228 (229)
T COG1011 225 LLER 228 (229)
T ss_pred HHhh
Confidence 7653
No 47
>PLN02779 haloacid dehalogenase-like hydrolase family protein
Probab=99.82 E-value=2e-19 Score=152.27 Aligned_cols=133 Identities=11% Similarity=0.054 Sum_probs=95.8
Q ss_pred CCCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCcccccce--EEecCceecCCCceEEeeccccccCCCcccc
Q 044617 70 CPLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSE--IYTNPTYVDEQGRLRILPYHDSTLSHHGCNL 147 (265)
Q Consensus 70 ~~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~~--i~~~~~~~d~~~~~~~~~~~~~~~kp~~~~~ 147 (265)
..++||+.++|+.|+++|++++|+||+....+..+++.++...+|+. +++. ......||
T Consensus 143 ~~l~pGv~elL~~L~~~g~~l~IvTn~~~~~~~~~l~~~~~~~~~~~~~~v~~--------------~~~~~~KP----- 203 (286)
T PLN02779 143 LPLRPGVLRLMDEALAAGIKVAVCSTSNEKAVSKIVNTLLGPERAQGLDVFAG--------------DDVPKKKP----- 203 (286)
T ss_pred CCchhhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhccccccCceEEEec--------------cccCCCCC-----
Confidence 57899999999999999999999999999999998887643333331 2232 11122356
Q ss_pred cCCCCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccCCCCCCeeeecCCCchhhhhhcCCCeeeEEEEeCCCHHHHH
Q 044617 148 CPSNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRDCDFVMPRKNYPLWDRICSNPMLIKAKVHEWSSAEELK 227 (265)
Q Consensus 148 ~~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~ 227 (265)
+|.++..+++++|++|+++++|||+.+|+.+|+++|+..+++. +|+.....+. .++..+ +++.|+.
T Consensus 204 ------~p~~~~~a~~~~~~~p~~~l~IGDs~~Di~aA~~aG~~~i~v~-~g~~~~~~l~----~ad~vi---~~~~~l~ 269 (286)
T PLN02779 204 ------DPDIYNLAAETLGVDPSRCVVVEDSVIGLQAAKAAGMRCIVTK-SSYTADEDFS----GADAVF---DCLGDVP 269 (286)
T ss_pred ------CHHHHHHHHHHhCcChHHEEEEeCCHHhHHHHHHcCCEEEEEc-cCCccccccC----CCcEEE---CChhhcc
Confidence 8999999999999999999999999999999999887656554 4443322221 234445 7887744
Q ss_pred H-HHHHHHH
Q 044617 228 K-ILLHLIG 235 (265)
Q Consensus 228 ~-~l~~~~~ 235 (265)
. -++-++.
T Consensus 270 ~~~~~~~~~ 278 (286)
T PLN02779 270 LEDFDLLFC 278 (286)
T ss_pred hhhhHHHHH
Confidence 3 3444443
No 48
>TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548. All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's.
Probab=99.82 E-value=1.4e-19 Score=145.50 Aligned_cols=90 Identities=13% Similarity=0.051 Sum_probs=78.5
Q ss_pred CChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCcccccceEEecCceecCCCceEEeeccccccCCCcccccCCC
Q 044617 72 LDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRILPYHDSTLSHHGCNLCPSN 151 (265)
Q Consensus 72 ~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp~~~~~~~~~ 151 (265)
+.+++.++|+.|+++|++++|+||+....+...++.+|+..+|+.+++.+ .... ||
T Consensus 107 ~~~~~~~~L~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~f~~~~~~~--------------~~~~-KP--------- 162 (197)
T TIGR01548 107 TLLTPKGLLRELHRAPKGMAVVTGRPRKDAAKFLTTHGLEILFPVQIWME--------------DCPP-KP--------- 162 (197)
T ss_pred cccCHHHHHHHHHHcCCcEEEECCCCHHHHHHHHHHcCchhhCCEEEeec--------------CCCC-Cc---------
Confidence 34456999999999999999999999999999999999999999888841 1112 56
Q ss_pred CchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccC
Q 044617 152 LCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLK 187 (265)
Q Consensus 152 ~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~ 187 (265)
++..+..+++++|++++++++|||+.+|+.+|++
T Consensus 163 --~p~~~~~~~~~~~~~~~~~i~vGD~~~Di~aA~~ 196 (197)
T TIGR01548 163 --NPEPLILAAKALGVEACHAAMVGDTVDDIITGRK 196 (197)
T ss_pred --CHHHHHHHHHHhCcCcccEEEEeCCHHHHHHHHh
Confidence 8999999999999999999999999999999854
No 49
>PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A ....
Probab=99.81 E-value=3.7e-20 Score=145.17 Aligned_cols=164 Identities=19% Similarity=0.292 Sum_probs=115.1
Q ss_pred EEEecCCCCCCCCch-----H-HHHHHhCchHHHHHHHccC--ChhHHHHHHHHHHHhC-CCCHHHHHHH--hcCCCCCh
Q 044617 6 VVFDFDRTLIDDDSD-----N-WVVTQMGLTHLFNQLRSTL--PWNSLMDRMMKELHSQ-GKTVEDIANC--LRQCPLDS 74 (265)
Q Consensus 6 iifD~DGTL~ds~~~-----~-~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~-~~~~~~~~~~--~~~~~~~~ 74 (265)
|+||+||||+++... . .+.+.++.+.....+.... ........+....... ....+.+.+. ....+++|
T Consensus 1 iifD~dgtL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (176)
T PF13419_consen 1 IIFDLDGTLVDTDPAIFRALQRLALEEFGLEISAEELRELFGKSYEEALERLLERFGIDPEEIQELFREYNLESKLQPYP 80 (176)
T ss_dssp EEEESBTTTEEHHHHHHHHHHHHHHHHTTHHHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGEEEST
T ss_pred cEEECCCCcEeCHHHHHHHHHHHHHHHhCCCCCHHHHHHHhCCCHHHHHHHhhhccchhHHHHHHHhhhhhhhhccchhh
Confidence 799999999998662 1 1344555543222222221 1112222222211110 0011122222 35678999
Q ss_pred hHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCcccccceEEecCceecCCCceEEeeccccccCCCcccccCCCCch
Q 044617 75 HVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRILPYHDSTLSHHGCNLCPSNLCK 154 (265)
Q Consensus 75 g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp~~~~~~~~~~~K 154 (265)
|+.++|+.|+++|++++++||+....+...++.+|+..+|+.+++.. .....|| +
T Consensus 81 ~~~~~L~~l~~~~~~~~i~Sn~~~~~~~~~l~~~~~~~~f~~i~~~~--------------~~~~~Kp-----------~ 135 (176)
T PF13419_consen 81 GVRELLERLKAKGIPLVIVSNGSRERIERVLERLGLDDYFDEIISSD--------------DVGSRKP-----------D 135 (176)
T ss_dssp THHHHHHHHHHTTSEEEEEESSEHHHHHHHHHHTTHGGGCSEEEEGG--------------GSSSSTT-----------S
T ss_pred hhhhhhhhcccccceeEEeecCCcccccccccccccccccccccccc--------------hhhhhhh-----------H
Confidence 99999999999999999999999999999999999999999998852 1222456 7
Q ss_pred HHHHHHHHHhcCCCCceEEEEcCCCCCcccccCCCCCCee
Q 044617 155 GFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRDCDFV 194 (265)
Q Consensus 155 ~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~~~~~ 194 (265)
+..++.+++++|++|+++++|||+..|+.+|+++|...+.
T Consensus 136 ~~~~~~~~~~~~~~p~~~~~vgD~~~d~~~A~~~G~~~i~ 175 (176)
T PF13419_consen 136 PDAYRRALEKLGIPPEEILFVGDSPSDVEAAKEAGIKTIW 175 (176)
T ss_dssp HHHHHHHHHHHTSSGGGEEEEESSHHHHHHHHHTTSEEEE
T ss_pred HHHHHHHHHHcCCCcceEEEEeCCHHHHHHHHHcCCeEEe
Confidence 8999999999999999999999999999999988876554
No 50
>PRK09456 ?-D-glucose-1-phosphatase; Provisional
Probab=99.80 E-value=8.4e-19 Score=141.13 Aligned_cols=102 Identities=14% Similarity=0.179 Sum_probs=85.8
Q ss_pred CCCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHh-cCcccccceEEecCceecCCCceEEeeccccccCCCccccc
Q 044617 70 CPLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEH-HGLLGCFSEIYTNPTYVDEQGRLRILPYHDSTLSHHGCNLC 148 (265)
Q Consensus 70 ~~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~-~gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp~~~~~~ 148 (265)
..++||+.++|+.|+++|++++|+||+....+...+.. .++..+|+.++++ ......||
T Consensus 83 ~~~~~g~~e~L~~l~~~g~~~~i~Sn~~~~~~~~~~~~~~~l~~~fd~v~~s--------------~~~~~~KP------ 142 (199)
T PRK09456 83 VALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEVRAAADHIYLS--------------QDLGMRKP------ 142 (199)
T ss_pred hccCHHHHHHHHHHHhCCCcEEEEcCCchhhHHHHHhhchhHHHhcCEEEEe--------------cccCCCCC------
Confidence 46899999999999999999999999988877766554 4788889988885 22233467
Q ss_pred CCCCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccCCCCCCeeee
Q 044617 149 PSNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRDCDFVMP 196 (265)
Q Consensus 149 ~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~~~~~~~ 196 (265)
+|..++.+++++|++|+++++|||+..|+.+|+++|...+.+.
T Consensus 143 -----~p~~~~~~~~~~~~~p~~~l~vgD~~~di~aA~~aG~~~i~~~ 185 (199)
T PRK09456 143 -----EARIYQHVLQAEGFSAADAVFFDDNADNIEAANALGITSILVT 185 (199)
T ss_pred -----CHHHHHHHHHHcCCChhHeEEeCCCHHHHHHHHHcCCEEEEec
Confidence 8999999999999999999999999999999998887665554
No 51
>PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated
Probab=99.80 E-value=3.4e-19 Score=141.29 Aligned_cols=137 Identities=12% Similarity=0.017 Sum_probs=95.6
Q ss_pred CCCCChhHHHHHHHHHHcCCcEEEEeCCCH---------------HHHHHHHHhcCcccccceEEecCceecCCCceEEe
Q 044617 69 QCPLDSHVAAAIKSAHSLGCDLKIVSDANQ---------------FYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRIL 133 (265)
Q Consensus 69 ~~~~~~g~~e~l~~l~~~g~~~~ivS~~~~---------------~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~ 133 (265)
...++||+.++|++|+++|++++|+||+.. ..+...++++|+ .|+.++.......
T Consensus 27 ~~~~~pgv~e~L~~Lk~~g~~l~I~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~--~f~~i~~~~~~~~-------- 96 (181)
T PRK08942 27 EWIPIPGSIEAIARLKQAGYRVVVATNQSGIARGLFTEAQLNALHEKMDWSLADRGG--RLDGIYYCPHHPE-------- 96 (181)
T ss_pred HeEECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHcCC--ccceEEECCCCCC--------
Confidence 456899999999999999999999999862 344556677776 3666665311000
Q ss_pred eccccccCCCcccccCCCCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccCCCCCCeeeecCCCchhhhhhcCCCee
Q 044617 134 PYHDSTLSHHGCNLCPSNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRDCDFVMPRKNYPLWDRICSNPMLI 213 (265)
Q Consensus 134 ~~~~~~~kp~~~~~~~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 213 (265)
......|| ++.++..+++++|++++++++|||+.+|+.+|+++|...+ .+.+|+....+....+ ..
T Consensus 97 -~~~~~~KP-----------~p~~~~~~~~~l~~~~~~~~~VgDs~~Di~~A~~aG~~~i-~v~~g~~~~~~~~~~~-~~ 162 (181)
T PRK08942 97 -DGCDCRKP-----------KPGMLLSIAERLNIDLAGSPMVGDSLRDLQAAAAAGVTPV-LVRTGKGVTTLAEGAA-PG 162 (181)
T ss_pred -CCCcCCCC-----------CHHHHHHHHHHcCCChhhEEEEeCCHHHHHHHHHCCCeEE-EEcCCCCchhhhcccC-CC
Confidence 11123466 8999999999999999999999999999999999888544 4455554322221111 00
Q ss_pred eEEEEeCCCHHHHHHHHHH
Q 044617 214 KAKVHEWSSAEELKKILLH 232 (265)
Q Consensus 214 ~~~~~~~~~~~el~~~l~~ 232 (265)
+..+ +++.||.++|.+
T Consensus 163 ~~ii---~~l~el~~~l~~ 178 (181)
T PRK08942 163 TWVL---DSLADLPQALKK 178 (181)
T ss_pred ceee---cCHHHHHHHHHh
Confidence 3444 889998887653
No 52
>TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED. HAD subfamilies caused by an overly broad single model.
Probab=99.80 E-value=2.7e-19 Score=141.75 Aligned_cols=99 Identities=8% Similarity=0.070 Sum_probs=84.4
Q ss_pred CCCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCcccccceEEecCceecCCCceEEeeccccccCCCcccccC
Q 044617 70 CPLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRILPYHDSTLSHHGCNLCP 149 (265)
Q Consensus 70 ~~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp~~~~~~~ 149 (265)
..++||+.++|+.|+++|++++|+||+.... .....++|+..+|+.+++.. .....||
T Consensus 84 ~~~~~g~~~~l~~l~~~g~~~~i~Tn~~~~~-~~~~~~~~l~~~f~~i~~~~--------------~~~~~KP------- 141 (183)
T TIGR01509 84 LKPLPGVEPLLEALRARGKKLALLTNSPRDH-AVLVQELGLRDLFDVVIFSG--------------DVGRGKP------- 141 (183)
T ss_pred CccCcCHHHHHHHHHHCCCeEEEEeCCchHH-HHHHHhcCCHHHCCEEEEcC--------------CCCCCCC-------
Confidence 5889999999999999999999999999888 66666699999999988741 1123456
Q ss_pred CCCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccCCCCCCee
Q 044617 150 SNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRDCDFV 194 (265)
Q Consensus 150 ~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~~~~~ 194 (265)
++..++.+++++|++|+++++|||+..|+.+|+++|...+.
T Consensus 142 ----~~~~~~~~~~~~~~~~~~~~~vgD~~~di~aA~~~G~~~i~ 182 (183)
T TIGR01509 142 ----DPDIYLLALKKLGLKPEECLFVDDSPAGIEAAKAAGMHTVL 182 (183)
T ss_pred ----CHHHHHHHHHHcCCCcceEEEEcCCHHHHHHHHHcCCEEEe
Confidence 78999999999999999999999999999999887775543
No 53
>TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase. These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA.
Probab=99.80 E-value=1.7e-19 Score=146.54 Aligned_cols=103 Identities=13% Similarity=0.183 Sum_probs=82.7
Q ss_pred CCCCChhHHHHHHHHHHcCCcEEEEeCCCHHH--HHHHHHhcCcccccceEEecCceecCCCceEEeeccccccCCCccc
Q 044617 69 QCPLDSHVAAAIKSAHSLGCDLKIVSDANQFY--IETIMEHHGLLGCFSEIYTNPTYVDEQGRLRILPYHDSTLSHHGCN 146 (265)
Q Consensus 69 ~~~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~--i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp~~~~ 146 (265)
...++||+.++|+.|+++|++++|+||+.... ....+...++..+|+.++++ ......||
T Consensus 92 ~~~~~~~~~~~L~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~l~~~fd~v~~s--------------~~~~~~KP---- 153 (211)
T TIGR02247 92 NTKLRPSMMAAIKTLRAKGFKTACITNNFPTDHSAEEALLPGDIMALFDAVVES--------------CLEGLRKP---- 153 (211)
T ss_pred ccccChhHHHHHHHHHHCCCeEEEEeCCCCccchhhhHhhhhhhHhhCCEEEEe--------------eecCCCCC----
Confidence 46789999999999999999999999986543 33334456788889988874 12223466
Q ss_pred ccCCCCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccCCCCCCeeee
Q 044617 147 LCPSNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRDCDFVMP 196 (265)
Q Consensus 147 ~~~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~~~~~~~ 196 (265)
+|..+..+++++|++|+++++|||+..|+.+|+++|...+.+.
T Consensus 154 -------~p~~~~~~~~~~g~~~~~~l~i~D~~~di~aA~~aG~~~i~v~ 196 (211)
T TIGR02247 154 -------DPRIYQLMLERLGVAPEECVFLDDLGSNLKPAAALGITTIKVS 196 (211)
T ss_pred -------CHHHHHHHHHHcCCCHHHeEEEcCCHHHHHHHHHcCCEEEEEC
Confidence 7899999999999999999999999999999988777655544
No 54
>PLN02919 haloacid dehalogenase-like hydrolase family protein
Probab=99.79 E-value=2.3e-18 Score=167.68 Aligned_cols=208 Identities=11% Similarity=0.046 Sum_probs=135.0
Q ss_pred CceEEEEecCCCCCCCCch-----HHHHHHhCchHHHHHHHccC--ChhHHHHHHHHHHHhCCCCHHH----HH----HH
Q 044617 2 ADVVVVFDFDRTLIDDDSD-----NWVVTQMGLTHLFNQLRSTL--PWNSLMDRMMKELHSQGKTVED----IA----NC 66 (265)
Q Consensus 2 ~~k~iifD~DGTL~ds~~~-----~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~----~~----~~ 66 (265)
++++|+|||||||+|+... ..++++.|++.....+.... ........+.......+...+. +. +.
T Consensus 74 ~ikaVIFDlDGTLiDS~~~~~~a~~~~~~~~G~~it~e~~~~~~G~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 153 (1057)
T PLN02919 74 KVSAVLFDMDGVLCNSEEPSRRAAVDVFAEMGVEVTVEDFVPFMGTGEANFLGGVASVKGVKGFDPDAAKKRFFEIYLEK 153 (1057)
T ss_pred CCCEEEECCCCCeEeChHHHHHHHHHHHHHcCCCCCHHHHHHHhCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHH
Confidence 4689999999999999753 45566667652222222111 1111111111110000111111 11 11
Q ss_pred h---cCCCCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCcc-cccceEEecCceecCCCceEEeeccccccCC
Q 044617 67 L---RQCPLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLL-GCFSEIYTNPTYVDEQGRLRILPYHDSTLSH 142 (265)
Q Consensus 67 ~---~~~~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~-~~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp 142 (265)
+ ....++||+.++|++|+++|++++|+||+....+...++++|+. .+|+.+++.+ .....||
T Consensus 154 ~~~~~~~~~~pG~~elL~~Lk~~G~~l~IvSn~~~~~~~~~L~~~gl~~~~Fd~iv~~~--------------~~~~~KP 219 (1057)
T PLN02919 154 YAKPNSGIGFPGALELITQCKNKGLKVAVASSADRIKVDANLAAAGLPLSMFDAIVSAD--------------AFENLKP 219 (1057)
T ss_pred hhhcccCccCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHcCCChhHCCEEEECc--------------ccccCCC
Confidence 1 11246999999999999999999999999999999999999996 7899988852 1122356
Q ss_pred CcccccCCCCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccCCCCCCeeeecCCCchhhhhhcCCCeeeEEEEeCCC
Q 044617 143 HGCNLCPSNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRDCDFVMPRKNYPLWDRICSNPMLIKAKVHEWSS 222 (265)
Q Consensus 143 ~~~~~~~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (265)
+|+++.++++++|++|+++++|||+.+|+++|+++|+..+++. +++....+... .++..+ ++
T Consensus 220 -----------~Pe~~~~a~~~lgv~p~e~v~IgDs~~Di~AA~~aGm~~I~v~-~~~~~~~L~~~---~a~~vi---~~ 281 (1057)
T PLN02919 220 -----------APDIFLAAAKILGVPTSECVVIEDALAGVQAARAAGMRCIAVT-TTLSEEILKDA---GPSLIR---KD 281 (1057)
T ss_pred -----------CHHHHHHHHHHcCcCcccEEEEcCCHHHHHHHHHcCCEEEEEC-CCCCHHHHhhC---CCCEEE---CC
Confidence 8999999999999999999999999999999999888666554 44544443322 233455 88
Q ss_pred HHHHHHHHHHHHHhhcccccc
Q 044617 223 AEELKKILLHLIGAISIKEDV 243 (265)
Q Consensus 223 ~~el~~~l~~~~~~~~~~~~~ 243 (265)
+.|+. +..++...+...+|
T Consensus 282 l~el~--~~~~~~~~~~~~~~ 300 (1057)
T PLN02919 282 IGNIS--LSDILTGGSDATPN 300 (1057)
T ss_pred hHHCC--HHHHHhcCCCCCCC
Confidence 88863 33444333333333
No 55
>TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E. HAD subfamilies caused by an overly broad single model.
Probab=99.79 E-value=1e-18 Score=134.84 Aligned_cols=93 Identities=16% Similarity=0.138 Sum_probs=80.0
Q ss_pred CCCCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCcccccceEEecCceecCCCceEEeeccccccCCCccccc
Q 044617 69 QCPLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRILPYHDSTLSHHGCNLC 148 (265)
Q Consensus 69 ~~~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp~~~~~~ 148 (265)
....++|+.++|+.|+++|++++|+||+....+...++.+ +..+|+.+++.+ ... .||
T Consensus 62 ~~~~~~g~~e~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~-l~~~f~~i~~~~--------------~~~-~Kp------ 119 (154)
T TIGR01549 62 EEAYIRGAADLLKRLKEAGIKLGIISNGSLRAQKLLLRKH-LGDYFDLILGSD--------------EFG-AKP------ 119 (154)
T ss_pred hheeccCHHHHHHHHHHCcCeEEEEeCCchHHHHHHHHHH-HHhcCcEEEecC--------------CCC-CCc------
Confidence 4456799999999999999999999999999999999987 778888888741 111 456
Q ss_pred CCCCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccCCC
Q 044617 149 PSNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLR 189 (265)
Q Consensus 149 ~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~ 189 (265)
++..+.++++++|+++ ++++|||+..|+.+|+++|
T Consensus 120 -----~~~~~~~~~~~~~~~~-~~l~iGDs~~Di~aa~~aG 154 (154)
T TIGR01549 120 -----EPEIFLAALESLGLPP-EVLHVGDNLNDIEGARNAG 154 (154)
T ss_pred -----CHHHHHHHHHHcCCCC-CEEEEeCCHHHHHHHHHcc
Confidence 8999999999999999 9999999999999997643
No 56
>TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase. This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812).
Probab=99.79 E-value=2.9e-19 Score=141.01 Aligned_cols=137 Identities=13% Similarity=0.118 Sum_probs=95.0
Q ss_pred CCCCChhHHHHHHHHHHcCCcEEEEeCCCH---------------HHHHHHHHhcCcccccceEEecCceecCCCceEEe
Q 044617 69 QCPLDSHVAAAIKSAHSLGCDLKIVSDANQ---------------FYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRIL 133 (265)
Q Consensus 69 ~~~~~~g~~e~l~~l~~~g~~~~ivS~~~~---------------~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~ 133 (265)
...++||+.++|++|+++|++++|+||+.. .++...+.++++. |+.++.........+.+
T Consensus 24 ~~~~~pgv~e~L~~Lk~~G~~l~i~TN~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--~~~i~~~~~~~~~~~~~--- 98 (176)
T TIGR00213 24 NFEFIDGVIDALRELKKMGYALVLVTNQSGIARGYFTEAQFEQLTEWMDWSLAERDVD--LDGIYYCPHHPEGVEEF--- 98 (176)
T ss_pred HeEECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHcCCC--ccEEEECCCCCcccccc---
Confidence 457899999999999999999999999874 3445566677765 66665431111100000
Q ss_pred eccccccCCCcccccCCCCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccCCCCCCeeeecCCCchhhhhhcCCCee
Q 044617 134 PYHDSTLSHHGCNLCPSNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRDCDFVMPRKNYPLWDRICSNPMLI 213 (265)
Q Consensus 134 ~~~~~~~kp~~~~~~~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 213 (265)
......+|| ++.++..+++++|+++++++||||+.+|+++|+++|...++++.+|+....... ..+
T Consensus 99 ~~~~~~~KP-----------~p~~~~~a~~~~~~~~~~~v~VGDs~~Di~aA~~aG~~~~i~v~~g~~~~~~~~---~~a 164 (176)
T TIGR00213 99 RQVCDCRKP-----------KPGMLLQARKELHIDMAQSYMVGDKLEDMQAGVAAKVKTNVLVRTGKPITPEAE---NIA 164 (176)
T ss_pred cCCCCCCCC-----------CHHHHHHHHHHcCcChhhEEEEcCCHHHHHHHHHCCCcEEEEEecCCccccccc---ccC
Confidence 001123456 899999999999999999999999999999999988776455666654322111 124
Q ss_pred eEEEEeCCCHHHHH
Q 044617 214 KAKVHEWSSAEELK 227 (265)
Q Consensus 214 ~~~~~~~~~~~el~ 227 (265)
+..+ +++.||.
T Consensus 165 d~~i---~~~~el~ 175 (176)
T TIGR00213 165 DWVL---NSLADLP 175 (176)
T ss_pred CEEe---ccHHHhh
Confidence 4555 8888875
No 57
>KOG1615 consensus Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=99.78 E-value=6.8e-18 Score=129.23 Aligned_cols=168 Identities=17% Similarity=0.253 Sum_probs=127.1
Q ss_pred ceEEEEecCCCCCCCCchHHHHHHhCchHHHHHHHcc-----CChhHHHHHHHHHHHhCCCCHHHHHHHh--cCCCCChh
Q 044617 3 DVVVVFDFDRTLIDDDSDNWVVTQMGLTHLFNQLRST-----LPWNSLMDRMMKELHSQGKTVEDIANCL--RQCPLDSH 75 (265)
Q Consensus 3 ~k~iifD~DGTL~ds~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~g 75 (265)
.++|+||+|.|++..+.+..+++..|..+...++..+ ..+......-...+ .....+....+ ...++.||
T Consensus 16 ~~aVcFDvDSTvi~eEgIdelA~~~G~~~~Va~~T~rAMng~~~F~eaL~~Rl~ll---qp~~~qv~~~v~~~k~~lT~G 92 (227)
T KOG1615|consen 16 ADAVCFDVDSTVIQEEGIDELAAYCGVGEAVAEVTRRAMNGEADFQEALAARLSLL---QPLQVQVEQFVIKQKPTLTPG 92 (227)
T ss_pred cCeEEEecCcchhHHhhHHHHHHHhCchHHHHHHHHHHhCCCCcHHHHHHHHHHHh---cccHHHHHHHHhcCCCccCCC
Confidence 4789999999999999999999999998776665533 23444333322222 22233333333 35788999
Q ss_pred HHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCcccccceEEecCceecCCCceEEeeccccccCCCcccccCCCCchH
Q 044617 76 VAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRILPYHDSTLSHHGCNLCPSNLCKG 155 (265)
Q Consensus 76 ~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp~~~~~~~~~~~K~ 155 (265)
++++...|+++|..++++|++....+.++...+|++ +..+++|...++.+|.+...... .|. .-+.+|+
T Consensus 93 i~eLv~~L~~~~~~v~liSGGF~~~i~~Va~~Lgi~--~~n~yAN~l~fd~~Gk~~gfd~~----~pt-----sdsggKa 161 (227)
T KOG1615|consen 93 IRELVSRLHARGTQVYLISGGFRQLIEPVAEQLGIP--KSNIYANELLFDKDGKYLGFDTN----EPT-----SDSGGKA 161 (227)
T ss_pred HHHHHHHHHHcCCeEEEEcCChHHHHHHHHHHhCCc--HhhhhhheeeeccCCcccccccC----Ccc-----ccCCccH
Confidence 999999999999999999999999999999999987 44789999999988876642111 111 2245699
Q ss_pred HHHHHHHHhcCCCCceEEEEcCCCCCccccc
Q 044617 156 FVLDHVCTSFGCGKQRFIYLGDGRGDFCPTL 186 (265)
Q Consensus 156 ~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~ 186 (265)
+++..+.+ +.+.+.++||||+.||++|..
T Consensus 162 ~~i~~lrk--~~~~~~~~mvGDGatDlea~~ 190 (227)
T KOG1615|consen 162 EVIALLRK--NYNYKTIVMVGDGATDLEAMP 190 (227)
T ss_pred HHHHHHHh--CCChheeEEecCCccccccCC
Confidence 99999888 677789999999999999883
No 58
>TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain. This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3.
Probab=99.77 E-value=4.5e-19 Score=135.76 Aligned_cols=105 Identities=12% Similarity=0.121 Sum_probs=80.0
Q ss_pred CCCChhHHHHHHHHHHcCCcEEEEeCCCH---------------HHHHHHHHhcCcccccceEEecCceecCCCceEEee
Q 044617 70 CPLDSHVAAAIKSAHSLGCDLKIVSDANQ---------------FYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRILP 134 (265)
Q Consensus 70 ~~~~~g~~e~l~~l~~~g~~~~ivS~~~~---------------~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~~ 134 (265)
..++||+.++|+.|+++|++++|+||+.. ..+...++.+|+.. ...+.......
T Consensus 26 ~~~~~g~~~~l~~Lk~~g~~~~I~Sn~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~--~~~~~~~~~~~--------- 94 (147)
T TIGR01656 26 WQLRPGAVPALLTLRAAGYTVVVVTNQSGIGRGYFSAEAFRAPNGRVLELLRQLGVAV--DGVLFCPHHPA--------- 94 (147)
T ss_pred eEEcCChHHHHHHHHHCCCEEEEEeCCCcccCCcCCHHHHHHHHHHHHHHHHhCCCce--eEEEECCCCCC---------
Confidence 46899999999999999999999999873 46777788888752 11221100000
Q ss_pred ccccccCCCcccccCCCCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccCCCCCCeeee
Q 044617 135 YHDSTLSHHGCNLCPSNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRDCDFVMP 196 (265)
Q Consensus 135 ~~~~~~kp~~~~~~~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~~~~~~~ 196 (265)
......|| ++++++++++++++++++++||||+..|+++|+++|...+++.
T Consensus 95 ~~~~~~KP-----------~~~~~~~~~~~~~~~~~e~i~IGDs~~Di~~A~~~Gi~~v~i~ 145 (147)
T TIGR01656 95 DNCSCRKP-----------KPGLILEALKRLGVDASRSLVVGDRLRDLQAARNAGLAAVLLV 145 (147)
T ss_pred CCCCCCCC-----------CHHHHHHHHHHcCCChHHEEEEcCCHHHHHHHHHCCCCEEEec
Confidence 01112356 8999999999999999999999999999999999888766654
No 59
>PHA02597 30.2 hypothetical protein; Provisional
Probab=99.76 E-value=1.4e-18 Score=139.58 Aligned_cols=163 Identities=10% Similarity=0.064 Sum_probs=102.5
Q ss_pred ceEEEEecCCCCCCCCc-hHHHHHHhCchH-HHHHHHccCChhHHHHHHH---HHHHhCCCCHHHH--HHHhcCCCCChh
Q 044617 3 DVVVVFDFDRTLIDDDS-DNWVVTQMGLTH-LFNQLRSTLPWNSLMDRMM---KELHSQGKTVEDI--ANCLRQCPLDSH 75 (265)
Q Consensus 3 ~k~iifD~DGTL~ds~~-~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~--~~~~~~~~~~~g 75 (265)
+|+|+|||||||+|... ...++++.|++. .+...............+. ..... . .+.+ ........++||
T Consensus 2 ~k~viFDlDGTLiD~~~~~~~~~~~~g~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~--~-~~~~~~~~~~~~~~~~pG 78 (197)
T PHA02597 2 KPTILTDVDGVLLSWQSGLPYFAQKYNIPTDHILKMIQDERFRDPGELFGCDQELAKK--L-IEKYNNSDFIRYLSAYDD 78 (197)
T ss_pred CcEEEEecCCceEchhhccHHHHHhcCCCHHHHHHHHhHhhhcCHHHHhcccHHHHHH--H-hhhhhHHHHHHhccCCCC
Confidence 69999999999999643 245666777652 1111111100000000000 00000 0 0001 112245678999
Q ss_pred HHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCccccc----ceEEecCceecCCCceEEeeccccccCCCcccccCCC
Q 044617 76 VAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCF----SEIYTNPTYVDEQGRLRILPYHDSTLSHHGCNLCPSN 151 (265)
Q Consensus 76 ~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f----~~i~~~~~~~d~~~~~~~~~~~~~~~kp~~~~~~~~~ 151 (265)
+.++|+.|++. ++++++||+........++.+++..+| +.+++.+ . .+|
T Consensus 79 ~~e~L~~L~~~-~~~~i~Tn~~~~~~~~~~~~~~l~~~f~~~f~~i~~~~-------------~----~~~--------- 131 (197)
T PHA02597 79 ALDVINKLKED-YDFVAVTALGDSIDALLNRQFNLNALFPGAFSEVLMCG-------------H----DES--------- 131 (197)
T ss_pred HHHHHHHHHhc-CCEEEEeCCccchhHHHHhhCCHHHhCCCcccEEEEec-------------c----Ccc---------
Confidence 99999999997 578888998776666667777776544 4444421 0 123
Q ss_pred CchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccCC--CCCCeeeecCCC
Q 044617 152 LCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKL--RDCDFVMPRKNY 200 (265)
Q Consensus 152 ~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~--~~~~~~~~~~~~ 200 (265)
|++.+..+++++| +++++||||+.+|+.+|+++ |...+.+ .+++
T Consensus 132 --kp~~~~~a~~~~~--~~~~v~vgDs~~di~aA~~a~~Gi~~i~~-~~~~ 177 (197)
T PHA02597 132 --KEKLFIKAKEKYG--DRVVCFVDDLAHNLDAAHEALSQLPVIHM-LRGE 177 (197)
T ss_pred --cHHHHHHHHHHhC--CCcEEEeCCCHHHHHHHHHHHcCCcEEEe-cchh
Confidence 8899999999999 78899999999999999987 7765555 4543
No 60
>PRK06769 hypothetical protein; Validated
Probab=99.75 E-value=3.6e-18 Score=134.21 Aligned_cols=134 Identities=7% Similarity=-0.018 Sum_probs=90.5
Q ss_pred CCCCChhHHHHHHHHHHcCCcEEEEeCCCHH--------HHHHHHHhcCcccccceEEecCceecCCCceEEeecccccc
Q 044617 69 QCPLDSHVAAAIKSAHSLGCDLKIVSDANQF--------YIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRILPYHDSTL 140 (265)
Q Consensus 69 ~~~~~~g~~e~l~~l~~~g~~~~ivS~~~~~--------~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~~ 140 (265)
...++||+.++|++|+++|++++|+||+... .....++.+|+..+|..+... .......
T Consensus 26 ~~~~~pgv~e~L~~Lk~~G~~l~I~Tn~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~-------------~~~~~~~ 92 (173)
T PRK06769 26 SFTLFPFTKASLQKLKANHIKIFSFTNQPGIADGIATIADFVQELKGFGFDDIYLCPHKH-------------GDGCECR 92 (173)
T ss_pred HeEECCCHHHHHHHHHHCCCEEEEEECCchhcCCcCCHHHHHHHHHhCCcCEEEECcCCC-------------CCCCCCC
Confidence 3567999999999999999999999998642 133336667765432211100 0111234
Q ss_pred CCCcccccCCCCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccCCCCCCeeeecCCCchhhhh--hcC--CCeeeEE
Q 044617 141 SHHGCNLCPSNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRDCDFVMPRKNYPLWDRI--CSN--PMLIKAK 216 (265)
Q Consensus 141 kp~~~~~~~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~~~~~~~~~~~~~~~~~--~~~--~~~~~~~ 216 (265)
|| ++..+..++++++++|++++||||+.+|+.+|+++|...+.+. +|+....+. .+. ...++..
T Consensus 93 KP-----------~p~~~~~~~~~l~~~p~~~i~IGD~~~Di~aA~~aGi~~i~v~-~g~~~~~~~~~~~~l~~~~~~~~ 160 (173)
T PRK06769 93 KP-----------STGMLLQAAEKHGLDLTQCAVIGDRWTDIVAAAKVNATTILVR-TGAGYDALHTYRDKWAHIEPNYI 160 (173)
T ss_pred CC-----------CHHHHHHHHHHcCCCHHHeEEEcCCHHHHHHHHHCCCeEEEEe-cCCCchhhhhhhcccccCCCcch
Confidence 66 8999999999999999999999999999999999888766664 443322110 000 1112333
Q ss_pred EEeCCCHHHHHHHH
Q 044617 217 VHEWSSAEELKKIL 230 (265)
Q Consensus 217 ~~~~~~~~el~~~l 230 (265)
+ +++.||.++|
T Consensus 161 ~---~~~~el~~~l 171 (173)
T PRK06769 161 A---ENFEDAVNWI 171 (173)
T ss_pred h---hCHHHHHHHH
Confidence 4 8888887765
No 61
>TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA. In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme.
Probab=99.75 E-value=3.9e-18 Score=128.23 Aligned_cols=98 Identities=15% Similarity=0.169 Sum_probs=81.3
Q ss_pred CCCChhHHHHHHHHHHcCCcEEEEeCCC--------HHHHHHHHHhcCcccccceEEecCceecCCCceEEeeccccccC
Q 044617 70 CPLDSHVAAAIKSAHSLGCDLKIVSDAN--------QFYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRILPYHDSTLS 141 (265)
Q Consensus 70 ~~~~~g~~e~l~~l~~~g~~~~ivS~~~--------~~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~~k 141 (265)
..++|++.++|+.|+++|++++|+||+. ...+...++.+++. +..++.. . ...|
T Consensus 24 ~~~~~~v~~~l~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~~l~~~~l~--~~~~~~~--------------~--~~~K 85 (132)
T TIGR01662 24 RILYPEVPDALAELKEAGYKVVIVTNQSGIGRGKFSSGRVARRLEELGVP--IDVLYAC--------------P--HCRK 85 (132)
T ss_pred heeCCCHHHHHHHHHHCCCEEEEEECCccccccHHHHHHHHHHHHHCCCC--EEEEEEC--------------C--CCCC
Confidence 4779999999999999999999999998 78899999999985 2233332 1 1235
Q ss_pred CCcccccCCCCchHHHHHHHHHhc-CCCCceEEEEcC-CCCCcccccCCCCCCeeee
Q 044617 142 HHGCNLCPSNLCKGFVLDHVCTSF-GCGKQRFIYLGD-GRGDFCPTLKLRDCDFVMP 196 (265)
Q Consensus 142 p~~~~~~~~~~~K~~~i~~~~~~~-gi~~~~~v~vGD-~~~Di~~a~~~~~~~~~~~ 196 (265)
| +++.++++++++ ++++++++|||| +.+|+.+|+++|...+++.
T Consensus 86 P-----------~~~~~~~~~~~~~~~~~~~~v~IGD~~~~Di~~A~~~Gi~~i~~~ 131 (132)
T TIGR01662 86 P-----------KPGMFLEALKRFNEIDPEESVYVGDQDLTDLQAAKRAGLAFILVA 131 (132)
T ss_pred C-----------ChHHHHHHHHHcCCCChhheEEEcCCCcccHHHHHHCCCeEEEee
Confidence 6 899999999999 599999999999 7999999998887766553
No 62
>TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490. A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog.
Probab=99.75 E-value=5.9e-17 Score=130.61 Aligned_cols=120 Identities=13% Similarity=0.045 Sum_probs=89.1
Q ss_pred CCCCHHHHHHHh----c---CCCCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCcccccceEEecCceecCCC
Q 044617 56 QGKTVEDIANCL----R---QCPLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTNPTYVDEQG 128 (265)
Q Consensus 56 ~~~~~~~~~~~~----~---~~~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~ 128 (265)
.|.+.+++.... . ...++|++.++|+.++++|++++|+|++...+++.+++++|+.. +++++..++++|
T Consensus 65 ~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~v~ivS~s~~~~v~~~~~~lg~~~----~~~~~l~~~~~g 140 (202)
T TIGR01490 65 AGLLEEDVRAIVEEFVNQKIESILYPEARDLIRWHKAEGHTIVLVSASLTILVKPLARILGIDN----AIGTRLEESEDG 140 (202)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCcc----eEecceEEcCCC
Confidence 466666554322 1 24689999999999999999999999999999999999999764 444444443344
Q ss_pred ceEEeeccccccCCCcccccCCCCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccCCC
Q 044617 129 RLRILPYHDSTLSHHGCNLCPSNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLR 189 (265)
Q Consensus 129 ~~~~~~~~~~~~kp~~~~~~~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~ 189 (265)
.++..... |. ..+..|...++.++++.+++++++++||||.+|+.+++.++
T Consensus 141 ~~~g~~~~-----~~-----~~g~~K~~~l~~~~~~~~~~~~~~~~~gDs~~D~~~~~~a~ 191 (202)
T TIGR01490 141 IYTGNIDG-----NN-----CKGEGKVHALAELLAEEQIDLKDSYAYGDSISDLPLLSLVG 191 (202)
T ss_pred EEeCCccC-----CC-----CCChHHHHHHHHHHHHcCCCHHHcEeeeCCcccHHHHHhCC
Confidence 44432111 00 12345889999999999999999999999999999996644
No 63
>PLN02811 hydrolase
Probab=99.74 E-value=1.5e-17 Score=135.84 Aligned_cols=107 Identities=9% Similarity=0.099 Sum_probs=85.6
Q ss_pred cCCCCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHH-HHHhcCcccccceEEecCceecCCCceEEeeccccccCCCccc
Q 044617 68 RQCPLDSHVAAAIKSAHSLGCDLKIVSDANQFYIET-IMEHHGLLGCFSEIYTNPTYVDEQGRLRILPYHDSTLSHHGCN 146 (265)
Q Consensus 68 ~~~~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~-~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp~~~~ 146 (265)
....++||+.++|+.|+++|++++|+||+....+.. ..+..++.++|+.+++.+. ......||
T Consensus 75 ~~~~l~~gv~e~l~~L~~~g~~~~i~S~~~~~~~~~~~~~~~~l~~~f~~i~~~~~------------~~~~~~KP---- 138 (220)
T PLN02811 75 PTSDLMPGAERLVRHLHAKGIPIAIATGSHKRHFDLKTQRHGELFSLMHHVVTGDD------------PEVKQGKP---- 138 (220)
T ss_pred hhCCCCccHHHHHHHHHHCCCcEEEEeCCchhhHHHHHcccHHHHhhCCEEEECCh------------hhccCCCC----
Confidence 456789999999999999999999999998765544 3344577888998888520 01112356
Q ss_pred ccCCCCchHHHHHHHHHhcC---CCCceEEEEcCCCCCcccccCCCCCCeeeec
Q 044617 147 LCPSNLCKGFVLDHVCTSFG---CGKQRFIYLGDGRGDFCPTLKLRDCDFVMPR 197 (265)
Q Consensus 147 ~~~~~~~K~~~i~~~~~~~g---i~~~~~v~vGD~~~Di~~a~~~~~~~~~~~~ 197 (265)
+|+++..++++++ +.+++++||||+..|+++|+++|+..+.+..
T Consensus 139 -------~p~~~~~a~~~~~~~~~~~~~~v~IgDs~~di~aA~~aG~~~i~v~~ 185 (220)
T PLN02811 139 -------APDIFLAAARRFEDGPVDPGKVLVFEDAPSGVEAAKNAGMSVVMVPD 185 (220)
T ss_pred -------CcHHHHHHHHHhCCCCCCccceEEEeccHhhHHHHHHCCCeEEEEeC
Confidence 8899999999996 9999999999999999999998887666654
No 64
>TIGR01261 hisB_Nterm histidinol-phosphatase. This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis.
Probab=99.73 E-value=3.8e-18 Score=132.04 Aligned_cols=107 Identities=15% Similarity=0.176 Sum_probs=84.7
Q ss_pred CCCCChhHHHHHHHHHHcCCcEEEEeCC---------------CHHHHHHHHHhcCcccccceEEecCceecCCCceEEe
Q 044617 69 QCPLDSHVAAAIKSAHSLGCDLKIVSDA---------------NQFYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRIL 133 (265)
Q Consensus 69 ~~~~~~g~~e~l~~l~~~g~~~~ivS~~---------------~~~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~ 133 (265)
...++||+.++|++|+++|++++|+||. ....+..+++.+|+. |+.++......
T Consensus 27 ~~~~~pgv~e~L~~L~~~g~~l~IvSN~~g~~~~~~~~~~~~~~~~~~~~~l~~~gl~--fd~ii~~~~~~--------- 95 (161)
T TIGR01261 27 KLRFEKGVIPALLKLKKAGYKFVMVTNQDGLGTPSFPQADFDGPHNLMLQIFRSQGII--FDDVLICPHFP--------- 95 (161)
T ss_pred HeeECCCHHHHHHHHHHCCCeEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHCCCc--eeEEEECCCCC---------
Confidence 4578999999999999999999999996 356788889999996 76554320000
Q ss_pred eccccccCCCcccccCCCCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccCCCCCCeeeec
Q 044617 134 PYHDSTLSHHGCNLCPSNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRDCDFVMPR 197 (265)
Q Consensus 134 ~~~~~~~kp~~~~~~~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~~~~~~~~ 197 (265)
.......|| ++..+..+++++++++++++||||+.+|+.+|+++|...+.+..
T Consensus 96 ~~~~~~~KP-----------~~~~~~~~~~~~~~~~~e~l~IGD~~~Di~~A~~aGi~~i~~~~ 148 (161)
T TIGR01261 96 DDNCDCRKP-----------KIKLLEPYLKKNLIDKARSYVIGDRETDMQLAENLGIRGIQYDE 148 (161)
T ss_pred CCCCCCCCC-----------CHHHHHHHHHHcCCCHHHeEEEeCCHHHHHHHHHCCCeEEEECh
Confidence 011123466 89999999999999999999999999999999988877666654
No 65
>TIGR01664 DNA-3'-Pase DNA 3'-phosphatase. The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region.
Probab=99.73 E-value=1.5e-17 Score=129.48 Aligned_cols=93 Identities=14% Similarity=0.136 Sum_probs=74.4
Q ss_pred CChhHHHHHHHHHHcCCcEEEEeCCCHH------------HHHHHHHhcCcccccceEEecCceecCCCceEEeeccccc
Q 044617 72 LDSHVAAAIKSAHSLGCDLKIVSDANQF------------YIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRILPYHDST 139 (265)
Q Consensus 72 ~~~g~~e~l~~l~~~g~~~~ivS~~~~~------------~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~ 139 (265)
++||+.++|+.|+++|++++|+||+... .+..+++++|+.. +.+++.. ....
T Consensus 43 ~~pgv~e~L~~Lk~~G~~l~I~TN~~~~~~~~~~~~~~~~~i~~~l~~~gl~~--~~ii~~~--------------~~~~ 106 (166)
T TIGR01664 43 LYPEIPAKLQELDDEGYKIVIFTNQSGIGRGKLSAESFKNKIEAFLEKLKVPI--QVLAATH--------------AGLY 106 (166)
T ss_pred ecCCHHHHHHHHHHCCCEEEEEeCCcccccCcccHHHHHHHHHHHHHHcCCCE--EEEEecC--------------CCCC
Confidence 6899999999999999999999998763 5778889999853 3444421 1112
Q ss_pred cCCCcccccCCCCchHHHHHHHHHhcC--CCCceEEEEcCCC--------CCcccccCCCCC
Q 044617 140 LSHHGCNLCPSNLCKGFVLDHVCTSFG--CGKQRFIYLGDGR--------GDFCPTLKLRDC 191 (265)
Q Consensus 140 ~kp~~~~~~~~~~~K~~~i~~~~~~~g--i~~~~~v~vGD~~--------~Di~~a~~~~~~ 191 (265)
.|| ++..++.+++++| +++++++||||+. +|+++|+++|..
T Consensus 107 ~KP-----------~p~~~~~~~~~~~~~~~~~~~v~VGD~~~~~~~~~~~Di~aA~~aGi~ 157 (166)
T TIGR01664 107 RKP-----------MTGMWEYLQSQYNSPIKMTRSFYVGDAAGRKLDFSDADIKFAKNLGLE 157 (166)
T ss_pred CCC-----------ccHHHHHHHHHcCCCCCchhcEEEECCCCCCCCCchhHHHHHHHCCCC
Confidence 356 7899999999999 9999999999996 699999775543
No 66
>TIGR01493 HAD-SF-IA-v2 Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase. The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single alignment is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only o
Probab=99.73 E-value=1.2e-17 Score=131.69 Aligned_cols=90 Identities=18% Similarity=0.255 Sum_probs=77.3
Q ss_pred HhcCCCCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCcccccceEEecCceecCCCceEEeeccccccCCCcc
Q 044617 66 CLRQCPLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRILPYHDSTLSHHGC 145 (265)
Q Consensus 66 ~~~~~~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp~~~ 145 (265)
.+....++||+.++|+ +++|+||+....+...++++|+..+|+.+++.+ .....||
T Consensus 85 ~~~~~~~~~g~~~~L~-------~~~i~Tn~~~~~~~~~l~~~~l~~~fd~v~~~~--------------~~~~~KP--- 140 (175)
T TIGR01493 85 AYKNLPPWPDSAAALA-------RVAILSNASHWAFDQFAQQAGLPWYFDRAFSVD--------------TVRAYKP--- 140 (175)
T ss_pred HHhcCCCCCchHHHHH-------HHhhhhCCCHHHHHHHHHHCCCHHHHhhhccHh--------------hcCCCCC---
Confidence 3456789999999998 388999999999999999999999999888752 1123466
Q ss_pred cccCCCCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccC
Q 044617 146 NLCPSNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLK 187 (265)
Q Consensus 146 ~~~~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~ 187 (265)
+|..+..+++++|++|++|++|||+.+|+.+|++
T Consensus 141 --------~p~~f~~~~~~~~~~p~~~l~vgD~~~Di~~A~~ 174 (175)
T TIGR01493 141 --------DPVVYELVFDTVGLPPDRVLMVAAHQWDLIGARK 174 (175)
T ss_pred --------CHHHHHHHHHHHCCCHHHeEeEecChhhHHHHhc
Confidence 8999999999999999999999999999999854
No 67
>TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672. Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion.
Probab=99.71 E-value=6.1e-17 Score=132.36 Aligned_cols=143 Identities=13% Similarity=0.062 Sum_probs=93.8
Q ss_pred eEEEEecCCCCCCCCchHHHHHHhCchHHHHHHHccCChhHHHHHHHHHHHhCCCCHHHHHHHh-cCCCCChhHHHHHHH
Q 044617 4 VVVVFDFDRTLIDDDSDNWVVTQMGLTHLFNQLRSTLPWNSLMDRMMKELHSQGKTVEDIANCL-RQCPLDSHVAAAIKS 82 (265)
Q Consensus 4 k~iifD~DGTL~ds~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~e~l~~ 82 (265)
-+|+||+||||+|+.... ..|.+......+........ .+.+.... ....+.+++.++|++
T Consensus 64 ~aViFDlDgTLlDSs~~~----~~G~~~~s~~~~~~l~g~~~--------------w~~~~~~~~~~s~p~~~a~elL~~ 125 (237)
T TIGR01672 64 IAVSFDIDDTVLFSSPGF----WRGKKTFSPGSEDYLKNQVF--------------WEKVNNGWDEFSIPKEVARQLIDM 125 (237)
T ss_pred eEEEEeCCCccccCcHHH----hCCcccCCHHHhhhhcChHH--------------HHHHHHhcccCCcchhHHHHHHHH
Confidence 389999999999997743 13333211100000000000 11111111 234567779999999
Q ss_pred HHHcCCcEEEEeCC----CHHHHHHHHHhcCcccccceEEecCceecCCCceEEeeccccccCCCcccccCCCCchHHHH
Q 044617 83 AHSLGCDLKIVSDA----NQFYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRILPYHDSTLSHHGCNLCPSNLCKGFVL 158 (265)
Q Consensus 83 l~~~g~~~~ivS~~----~~~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp~~~~~~~~~~~K~~~i 158 (265)
++++|++++++||+ ....++.+++++|+..+|+.+++.+. . ... |+...
T Consensus 126 l~~~G~~i~iVTnr~~~k~~~~a~~ll~~lGi~~~f~~i~~~d~------------~--~~~-------------Kp~~~ 178 (237)
T TIGR01672 126 HQRRGDAIFFVTGRTPGKTDTVSKTLAKNFHIPAMNPVIFAGDK------------P--GQY-------------QYTKT 178 (237)
T ss_pred HHHCCCEEEEEeCCCCCcCHHHHHHHHHHhCCchheeEEECCCC------------C--CCC-------------CCCHH
Confidence 99999999999998 67789999999999999888777411 0 001 22222
Q ss_pred HHHHHhcCCCCceEEEEcCCCCCcccccCCCCCCeeee
Q 044617 159 DHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRDCDFVMP 196 (265)
Q Consensus 159 ~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~~~~~~~ 196 (265)
.+++++++ ++||||+.+|+.+|+++|...+.+.
T Consensus 179 -~~l~~~~i----~i~vGDs~~DI~aAk~AGi~~I~V~ 211 (237)
T TIGR01672 179 -QWIQDKNI----RIHYGDSDNDITAAKEAGARGIRIL 211 (237)
T ss_pred -HHHHhCCC----eEEEeCCHHHHHHHHHCCCCEEEEE
Confidence 35566665 7999999999999999887766665
No 68
>TIGR01685 MDP-1 magnesium-dependent phosphatase-1. This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues.
Probab=99.71 E-value=6.6e-18 Score=131.62 Aligned_cols=107 Identities=9% Similarity=0.042 Sum_probs=83.1
Q ss_pred CCCCChhHHHHHHHHHHcCCcEEEEeCC-CHHHHHHHHHhcCcc---------cccceEEecCceecCCCceEEeecccc
Q 044617 69 QCPLDSHVAAAIKSAHSLGCDLKIVSDA-NQFYIETIMEHHGLL---------GCFSEIYTNPTYVDEQGRLRILPYHDS 138 (265)
Q Consensus 69 ~~~~~~g~~e~l~~l~~~g~~~~ivS~~-~~~~i~~~l~~~gl~---------~~f~~i~~~~~~~d~~~~~~~~~~~~~ 138 (265)
...++||+.++|+.|+++|++++|+||+ ....++.+++.+++. ++|+.+++.+. ..
T Consensus 43 ~~~l~pGv~elL~~Lk~~G~~l~I~Sn~~~~~~~~~~L~~~~l~~~~~~~~~~~~Fd~iv~~~~--------------~~ 108 (174)
T TIGR01685 43 EVTLIKEVRDVLQTLKDAGTYLATASWNDVPEWAYEILGTFEITYAGKTVPMHSLFDDRIEIYK--------------PN 108 (174)
T ss_pred EEEEcccHHHHHHHHHHCCCEEEEEeCCCChHHHHHHHHhCCcCCCCCcccHHHhceeeeeccC--------------Cc
Confidence 5688999999999999999999999998 889999999999998 89998888521 00
Q ss_pred ccCCCcccccCCCCchHHHHHHHHHhc--CCCCceEEEEcCCCCCcccccCCCCCCeeeecCCCc
Q 044617 139 TLSHHGCNLCPSNLCKGFVLDHVCTSF--GCGKQRFIYLGDGRGDFCPTLKLRDCDFVMPRKNYP 201 (265)
Q Consensus 139 ~~kp~~~~~~~~~~~K~~~i~~~~~~~--gi~~~~~v~vGD~~~Di~~a~~~~~~~~~~~~~~~~ 201 (265)
..|| -+..++.+.+.+ |++|++++||||+..|+.+|+++|.. ++.+.+|+.
T Consensus 109 ~~kp-----------~~~i~~~~~~~~~~gl~p~e~l~VgDs~~di~aA~~aGi~-~i~v~~g~~ 161 (174)
T TIGR01685 109 KAKQ-----------LEMILQKVNKVDPSVLKPAQILFFDDRTDNVREVWGYGVT-SCYCPSGMD 161 (174)
T ss_pred hHHH-----------HHHHHHHhhhcccCCCCHHHeEEEcChhHhHHHHHHhCCE-EEEcCCCcc
Confidence 0111 245556666666 79999999999999999999886664 344445433
No 69
>TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family. The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved.
Probab=99.69 E-value=4.6e-17 Score=125.46 Aligned_cols=84 Identities=15% Similarity=0.235 Sum_probs=71.7
Q ss_pred HHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCcccccceEEecCceecCCCceEEeeccccccCCCcccccCCCCchHHHH
Q 044617 79 AIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRILPYHDSTLSHHGCNLCPSNLCKGFVL 158 (265)
Q Consensus 79 ~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp~~~~~~~~~~~K~~~i 158 (265)
.|++|+++|++++|+||+....+...++++|+..+|+. . +| |+..+
T Consensus 36 ~i~~Lk~~G~~i~IvTn~~~~~~~~~l~~~gi~~~~~~------------------~-----~~-----------k~~~~ 81 (154)
T TIGR01670 36 GIRCALKSGIEVAIITGRKAKLVEDRCKTLGITHLYQG------------------Q-----SN-----------KLIAF 81 (154)
T ss_pred HHHHHHHCCCEEEEEECCCCHHHHHHHHHcCCCEEEec------------------c-----cc-----------hHHHH
Confidence 89999999999999999999999999999998755431 0 12 89999
Q ss_pred HHHHHhcCCCCceEEEEcCCCCCcccccCCCCCCeeeec
Q 044617 159 DHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRDCDFVMPR 197 (265)
Q Consensus 159 ~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~~~~~~~~ 197 (265)
.++++++|+++++++||||+.||+.+++.++. +++++.
T Consensus 82 ~~~~~~~~~~~~~~~~vGDs~~D~~~~~~ag~-~~~v~~ 119 (154)
T TIGR01670 82 SDILEKLALAPENVAYIGDDLIDWPVMEKVGL-SVAVAD 119 (154)
T ss_pred HHHHHHcCCCHHHEEEECCCHHHHHHHHHCCC-eEecCC
Confidence 99999999999999999999999999977665 355543
No 70
>TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544. This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.
Probab=99.68 E-value=5.5e-15 Score=122.67 Aligned_cols=122 Identities=16% Similarity=0.139 Sum_probs=99.7
Q ss_pred hCCCCHHHHHHHhc--CCCCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCcccccceEEecCceecCCCceEE
Q 044617 55 SQGKTVEDIANCLR--QCPLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRI 132 (265)
Q Consensus 55 ~~~~~~~~~~~~~~--~~~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~ 132 (265)
..+.+.+.+...+. ...+.||+.++++.|+++|++++|+|++....++.+++.+|+...+..+++|...++++|..+.
T Consensus 103 ~~~~~~e~i~~~v~~~~l~l~pG~~efl~~L~~~GIpv~IvS~G~~~~Ie~vL~~lgl~~~~~~IvSN~L~f~~dGvltG 182 (277)
T TIGR01544 103 QQAFPKAKIKEIVAESDVMLKDGYENFFDKLQQHSIPVFIFSAGIGNVLEEVLRQAGVYHPNVKVVSNFMDFDEDGVLKG 182 (277)
T ss_pred cCCCCHHHHHHHHhhcCCccCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHHcCCCCcCceEEeeeEEECCCCeEeC
Confidence 33567788888775 7899999999999999999999999999999999999999997778899999999987777664
Q ss_pred eeccccccCCCcccccCCCCchHHHHH-HHHHhcC--CCCceEEEEcCCCCCcccccC
Q 044617 133 LPYHDSTLSHHGCNLCPSNLCKGFVLD-HVCTSFG--CGKQRFIYLGDGRGDFCPTLK 187 (265)
Q Consensus 133 ~~~~~~~~kp~~~~~~~~~~~K~~~i~-~~~~~~g--i~~~~~v~vGD~~~Di~~a~~ 187 (265)
.+.+. ....+|...+. .+.+.++ .++++++++|||.+|+.||..
T Consensus 183 ~~~P~-----------i~~~~K~~~v~~~~~~~~~~~~~~~~vI~vGDs~~Dl~ma~g 229 (277)
T TIGR01544 183 FKGPL-----------IHTFNKNHDVALRNTEYFNQLKDRSNIILLGDSQGDLRMADG 229 (277)
T ss_pred CCCCc-----------ccccccHHHHHHHHHHHhCccCCcceEEEECcChhhhhHhcC
Confidence 32211 01234665554 6888888 889999999999999999953
No 71
>COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only]
Probab=99.67 E-value=1e-15 Score=128.48 Aligned_cols=172 Identities=17% Similarity=0.227 Sum_probs=116.7
Q ss_pred CCceEEEEecCCCCCCCCchHHHHHHhCchHHHHHHHccCChhHHHHHHHHHHHhCCCCHHHHHHHhcCCCCChhHHHHH
Q 044617 1 MADVVVVFDFDRTLIDDDSDNWVVTQMGLTHLFNQLRSTLPWNSLMDRMMKELHSQGKTVEDIANCLRQCPLDSHVAAAI 80 (265)
Q Consensus 1 M~~k~iifD~DGTL~ds~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~e~l 80 (265)
|++|+|+|||||||++++. .+.+.+++.|
T Consensus 1 ~~~kli~~DlDGTLl~~~~---------------------------------------------------~i~~~~~~al 29 (264)
T COG0561 1 MMIKLLAFDLDGTLLDSNK---------------------------------------------------TISPETKEAL 29 (264)
T ss_pred CCeeEEEEcCCCCccCCCC---------------------------------------------------ccCHHHHHHH
Confidence 7899999999999999943 4788999999
Q ss_pred HHHHHcCCcEEEEeCCCHHHHHHHHHhcCcccccceEEecCceecC----------------------------------
Q 044617 81 KSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTNPTYVDE---------------------------------- 126 (265)
Q Consensus 81 ~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~~i~~~~~~~d~---------------------------------- 126 (265)
++++++|++++|+|++....+..+++.+++..+ .|..|...+-.
T Consensus 30 ~~~~~~g~~v~iaTGR~~~~~~~~~~~l~~~~~--~I~~NGa~i~~~~~~i~~~~l~~~~~~~i~~~~~~~~~~~~~~~~ 107 (264)
T COG0561 30 ARLREKGVKVVLATGRPLPDVLSILEELGLDGP--LITFNGALIYNGGELLFQKPLSREDVEELLELLEDFQGIALVLYT 107 (264)
T ss_pred HHHHHCCCEEEEECCCChHHHHHHHHHcCCCcc--EEEeCCeEEecCCcEEeeecCCHHHHHHHHHHHHhccCceEEEEe
Confidence 999999999999999999999999999988653 11111111000
Q ss_pred CC-c----------------------------------eEEe--------------------eccccccCCCcccccCCC
Q 044617 127 QG-R----------------------------------LRIL--------------------PYHDSTLSHHGCNLCPSN 151 (265)
Q Consensus 127 ~~-~----------------------------------~~~~--------------------~~~~~~~kp~~~~~~~~~ 151 (265)
.. . .... ......+.+..+++.+.|
T Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~s~~~~lei~~~g 187 (264)
T COG0561 108 DDGIYLTKKRGTFAEARIGFANLSPVGREAAELEDNKIIALDKDHEILEELVEALRKRFPDLGLTVSSSGPISLDITPKG 187 (264)
T ss_pred ccceeeccCCCcccccccccccccccccchhhcCcceEEEEecChHhHHHHHHHHhhhccccceEEEEcCCceEEEecCC
Confidence 00 0 0000 000001122236778999
Q ss_pred CchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccCCCCCCeeeecCCCchhhhhhcCCCeeeEEEEeCCCHHHHHHHHH
Q 044617 152 LCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRDCDFVMPRKNYPLWDRICSNPMLIKAKVHEWSSAEELKKILL 231 (265)
Q Consensus 152 ~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~l~ 231 (265)
.+|+.+++.+++++|++++++++|||+.||+.|.+ .++..++-.+. ...+++.. + .+..-++.+-+...|+
T Consensus 188 ~~K~~al~~l~~~lgi~~~~v~afGD~~ND~~Ml~---~ag~gvam~Na--~~~~k~~A---~-~vt~~n~~~Gv~~~l~ 258 (264)
T COG0561 188 VSKGYALQRLAKLLGIKLEEVIAFGDSTNDIEMLE---VAGLGVAMGNA--DEELKELA---D-YVTTSNDEDGVAEALE 258 (264)
T ss_pred CchHHHHHHHHHHhCCCHHHeEEeCCccccHHHHH---hcCeeeeccCC--CHHHHhhC---C-cccCCccchHHHHHHH
Confidence 99999999999999999999999999999999994 45555554432 12232211 1 1222244555888888
Q ss_pred HHH
Q 044617 232 HLI 234 (265)
Q Consensus 232 ~~~ 234 (265)
+++
T Consensus 259 ~~~ 261 (264)
T COG0561 259 KLL 261 (264)
T ss_pred HHh
Confidence 775
No 72
>PRK01158 phosphoglycolate phosphatase; Provisional
Probab=99.67 E-value=1.1e-15 Score=125.69 Aligned_cols=141 Identities=19% Similarity=0.225 Sum_probs=98.2
Q ss_pred CCceEEEEecCCCCCCCCchHHHHHHhCchHHHHHHHccCChhHHHHHHHHHHHhCCCCHHHHHHHhcCCCCChhHHHHH
Q 044617 1 MADVVVVFDFDRTLIDDDSDNWVVTQMGLTHLFNQLRSTLPWNSLMDRMMKELHSQGKTVEDIANCLRQCPLDSHVAAAI 80 (265)
Q Consensus 1 M~~k~iifD~DGTL~ds~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~e~l 80 (265)
|++|+|+||+||||++++ ..+.|.+.+.|
T Consensus 1 m~~kli~~DlDGTLl~~~---------------------------------------------------~~i~~~~~~al 29 (230)
T PRK01158 1 MKIKAIAIDIDGTITDKD---------------------------------------------------RRLSLKAVEAI 29 (230)
T ss_pred CceeEEEEecCCCcCCCC---------------------------------------------------CccCHHHHHHH
Confidence 778999999999999873 24678888999
Q ss_pred HHHHHcCCcEEEEeCCCHHHHHHHHHhcCcccccceEEecCcee-cC-CCc---------------------------eE
Q 044617 81 KSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTNPTYV-DE-QGR---------------------------LR 131 (265)
Q Consensus 81 ~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~~i~~~~~~~-d~-~~~---------------------------~~ 131 (265)
++++++|++++++|++....+..+++.+++..+ .+..+...+ +. .+. +.
T Consensus 30 ~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~--~i~~nGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 107 (230)
T PRK01158 30 RKAEKLGIPVILATGNVLCFARAAAKLIGTSGP--VIAENGGVISVGFDGKRIFLGDIEECEKAYSELKKRFPEASTSLT 107 (230)
T ss_pred HHHHHCCCEEEEEcCCchHHHHHHHHHhCCCCc--EEEecCeEEEEcCCCCEEEEcchHHHHHHHHHHHHhccccceeee
Confidence 999999999999999998888888888887643 222222111 00 000 00
Q ss_pred ------------E-eec---------------cccccCCCcccccCCCCchHHHHHHHHHhcCCCCceEEEEcCCCCCcc
Q 044617 132 ------------I-LPY---------------HDSTLSHHGCNLCPSNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFC 183 (265)
Q Consensus 132 ------------~-~~~---------------~~~~~kp~~~~~~~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~ 183 (265)
+ ... ..........++.+.+.+|+.+++.+++.+|++++++++|||+.||+.
T Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ei~~~~~~Kg~al~~l~~~~~i~~~~~i~~GD~~NDi~ 187 (230)
T PRK01158 108 KLDPDYRKTEVALRRTVPVEEVRELLEELGLDLEIVDSGFAIHIKSPGVNKGTGLKKLAELMGIDPEEVAAIGDSENDLE 187 (230)
T ss_pred cCCcccccceeeecccccHHHHHHHHHHcCCcEEEEecceEEEEeeCCCChHHHHHHHHHHhCCCHHHEEEECCchhhHH
Confidence 0 000 000000111255688999999999999999999999999999999999
Q ss_pred cccCCCCCCeeeec
Q 044617 184 PTLKLRDCDFVMPR 197 (265)
Q Consensus 184 ~a~~~~~~~~~~~~ 197 (265)
|++. +++.++-
T Consensus 188 m~~~---ag~~vam 198 (230)
T PRK01158 188 MFEV---AGFGVAV 198 (230)
T ss_pred HHHh---cCceEEe
Confidence 9955 4444443
No 73
>TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC. No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC.
Probab=99.67 E-value=2.2e-16 Score=117.81 Aligned_cols=86 Identities=9% Similarity=0.097 Sum_probs=74.4
Q ss_pred CCChhHHHHHHHHHHcCCcEEEEeCC-CHHHHHHHHHhcC-------cccccceEEecCceecCCCceEEeeccccccCC
Q 044617 71 PLDSHVAAAIKSAHSLGCDLKIVSDA-NQFYIETIMEHHG-------LLGCFSEIYTNPTYVDEQGRLRILPYHDSTLSH 142 (265)
Q Consensus 71 ~~~~g~~e~l~~l~~~g~~~~ivS~~-~~~~i~~~l~~~g-------l~~~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp 142 (265)
.++||+.++|+.|+++|++++|+||+ ...++...++.++ +.++|+.+++.+ . +|
T Consensus 29 ~~~~gv~e~L~~Lk~~g~~l~i~Sn~~~~~~~~~~l~~~~~~~~i~~l~~~f~~~~~~~-------------~-----~p 90 (128)
T TIGR01681 29 VTIKEIRDKLQTLKKNGFLLALASYNDDPHVAYELLKIFEDFGIIFPLAEYFDPLTIGY-------------W-----LP 90 (128)
T ss_pred HHHHHHHHHHHHHHHCCeEEEEEeCCCCHHHHHHHHHhccccccchhhHhhhhhhhhcC-------------C-----Cc
Confidence 67999999999999999999999999 8888889889888 677777666531 1 13
Q ss_pred CcccccCCCCchHHHHHHHHHhcC--CCCceEEEEcCCCCCcccc
Q 044617 143 HGCNLCPSNLCKGFVLDHVCTSFG--CGKQRFIYLGDGRGDFCPT 185 (265)
Q Consensus 143 ~~~~~~~~~~~K~~~i~~~~~~~g--i~~~~~v~vGD~~~Di~~a 185 (265)
|+..+..+++++| +.|++++||||+..|+...
T Consensus 91 -----------kp~~~~~a~~~lg~~~~p~~~l~igDs~~n~~~~ 124 (128)
T TIGR01681 91 -----------KSPRLVEIALKLNGVLKPKSILFVDDRPDNNEEV 124 (128)
T ss_pred -----------HHHHHHHHHHHhcCCCCcceEEEECCCHhHHHHH
Confidence 8999999999999 9999999999999997655
No 74
>PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional
Probab=99.65 E-value=2.3e-15 Score=126.95 Aligned_cols=83 Identities=14% Similarity=0.148 Sum_probs=57.6
Q ss_pred ccccCCCCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccCCCCCCeeeecCCCchhhhhhcCCCeeeE-EEEeCCCH
Q 044617 145 CNLCPSNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRDCDFVMPRKNYPLWDRICSNPMLIKA-KVHEWSSA 223 (265)
Q Consensus 145 ~~~~~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 223 (265)
+++.+.+.+|+.+++.+++.+|++++++++|||+.||+.|.+. +++.++-.+ +. ..+++. ++. .+..-++.
T Consensus 180 ~eI~~~g~sKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~---ag~~vAm~N-a~-~~vK~~---A~~~~v~~~n~e 251 (272)
T PRK15126 180 LEVLPVGCNKGAALAVLSQHLGLSLADCMAFGDAMNDREMLGS---VGRGFIMGN-AM-PQLRAE---LPHLPVIGHCRN 251 (272)
T ss_pred EEeecCCCChHHHHHHHHHHhCCCHHHeEEecCCHHHHHHHHH---cCCceeccC-Ch-HHHHHh---CCCCeecCCCcc
Confidence 4677999999999999999999999999999999999999954 444444332 11 223321 111 12222334
Q ss_pred HHHHHHHHHHHH
Q 044617 224 EELKKILLHLIG 235 (265)
Q Consensus 224 ~el~~~l~~~~~ 235 (265)
.-+...|++++.
T Consensus 252 dGva~~l~~~~~ 263 (272)
T PRK15126 252 QAVSHYLTHWLD 263 (272)
T ss_pred hHHHHHHHHHhc
Confidence 448888988874
No 75
>cd01427 HAD_like Haloacid dehalogenase-like hydrolases. The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.
Probab=99.65 E-value=3.2e-16 Score=117.56 Aligned_cols=118 Identities=14% Similarity=0.094 Sum_probs=88.0
Q ss_pred cCCCCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCcccccceEEecCceecCCCceEEeeccccccCCCcccc
Q 044617 68 RQCPLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRILPYHDSTLSHHGCNL 147 (265)
Q Consensus 68 ~~~~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp~~~~~ 147 (265)
....+++++.++|+.|+++|++++++|++....+...++.+++...++.+++............ .+.....
T Consensus 21 ~~~~~~~~~~~~l~~l~~~g~~i~ivS~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~---------~~~~~~~ 91 (139)
T cd01427 21 EELELYPGVKEALKELKEKGIKLALATNKSRREVLELLEELGLDDYFDPVITSNGAAIYYPKEG---------LFLGGGP 91 (139)
T ss_pred ccCCcCcCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHHcCCchhhhheeccchhhhhccccc---------ccccccc
Confidence 3578899999999999999999999999999999999999998777777776532211000000 0000111
Q ss_pred cCCCCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccCCCCCCee
Q 044617 148 CPSNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRDCDFV 194 (265)
Q Consensus 148 ~~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~~~~~ 194 (265)
+..+..|+..+..+++.++..++++++|||+.+|+.++++++..+++
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~igD~~~d~~~~~~~g~~~i~ 138 (139)
T cd01427 92 FDIGKPNPDKLLAALKLLGVDPEEVLMVGDSLNDIEMAKAAGGLGVA 138 (139)
T ss_pred cccCCCCHHHHHHHHHHcCCChhhEEEeCCCHHHHHHHHHcCCceee
Confidence 12234489999999999999999999999999999999876655443
No 76
>PRK10513 sugar phosphate phosphatase; Provisional
Probab=99.65 E-value=2.2e-15 Score=126.93 Aligned_cols=81 Identities=9% Similarity=0.111 Sum_probs=55.4
Q ss_pred ccccCCCCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccCCCCCCeeeecCCCchhhhhhcCCCeeeEEEEeCCCHH
Q 044617 145 CNLCPSNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRDCDFVMPRKNYPLWDRICSNPMLIKAKVHEWSSAE 224 (265)
Q Consensus 145 ~~~~~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (265)
+++.+.|.+|+.+++.+++.+|++++++++|||+.||+.|.+. +++.++-.+ +. ..+++. ++... .-++..
T Consensus 188 ~eI~~~gvsKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~---ag~~vAm~N-A~-~~vK~~---A~~vt-~~n~~d 258 (270)
T PRK10513 188 LEILDKRVNKGTGVKSLAEHLGIKPEEVMAIGDQENDIAMIEY---AGVGVAMGN-AI-PSVKEV---AQFVT-KSNLED 258 (270)
T ss_pred EEEeCCCCChHHHHHHHHHHhCCCHHHEEEECCchhhHHHHHh---CCceEEecC-cc-HHHHHh---cCeec-cCCCcc
Confidence 4677899999999999999999999999999999999999954 444444332 11 223321 12221 113333
Q ss_pred HHHHHHHHHH
Q 044617 225 ELKKILLHLI 234 (265)
Q Consensus 225 el~~~l~~~~ 234 (265)
-+...|++++
T Consensus 259 Gva~~i~~~~ 268 (270)
T PRK10513 259 GVAFAIEKYV 268 (270)
T ss_pred hHHHHHHHHh
Confidence 3888887765
No 77
>PRK11590 hypothetical protein; Provisional
Probab=99.64 E-value=2.6e-15 Score=121.87 Aligned_cols=100 Identities=12% Similarity=-0.020 Sum_probs=72.2
Q ss_pred CCCChhHHHHH-HHHHHcCCcEEEEeCCCHHHHHHHHHhcCcccccceEEecCceecCCCceEEeeccccccCCCccccc
Q 044617 70 CPLDSHVAAAI-KSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRILPYHDSTLSHHGCNLC 148 (265)
Q Consensus 70 ~~~~~g~~e~l-~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp~~~~~~ 148 (265)
..++||+.++| +.++++|++++|+||+...+++.+++.+|+.. .+.+++++..+.-.|.+.. .+
T Consensus 94 ~~~~pga~e~L~~~l~~~G~~l~IvSas~~~~~~~il~~l~~~~-~~~~i~t~l~~~~tg~~~g----------~~---- 158 (211)
T PRK11590 94 VTAFPVVQERLTTYLLSSDADVWLITGSPQPLVEQVYFDTPWLP-RVNLIASQMQRRYGGWVLT----------LR---- 158 (211)
T ss_pred CcCCccHHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHccccc-cCceEEEEEEEEEccEECC----------cc----
Confidence 56799999999 67888999999999999999999999999632 3466776543321222110 01
Q ss_pred CCCCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccC
Q 044617 149 PSNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLK 187 (265)
Q Consensus 149 ~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~ 187 (265)
..|..|...+++++ +.+...++++|||.+|+.+...
T Consensus 159 c~g~~K~~~l~~~~---~~~~~~~~aY~Ds~~D~pmL~~ 194 (211)
T PRK11590 159 CLGHEKVAQLERKI---GTPLRLYSGYSDSKQDNPLLYF 194 (211)
T ss_pred CCChHHHHHHHHHh---CCCcceEEEecCCcccHHHHHh
Confidence 12444666666665 4566788999999999999844
No 78
>PRK10976 putative hydrolase; Provisional
Probab=99.63 E-value=8e-15 Score=123.21 Aligned_cols=82 Identities=18% Similarity=0.227 Sum_probs=56.3
Q ss_pred ccccCCCCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccCCCCCCeeeecCCCchhhhhhcCCCeeeE-EEEeCCCH
Q 044617 145 CNLCPSNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRDCDFVMPRKNYPLWDRICSNPMLIKA-KVHEWSSA 223 (265)
Q Consensus 145 ~~~~~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 223 (265)
+++.+.+.+|+.+++.+++.+|++++++++|||+.||+.|.+.+| .++++.+. . ..+++. +++ .+..-++.
T Consensus 182 ~eI~~~gvsKg~al~~l~~~lgi~~~~viafGD~~NDi~Ml~~ag-~~vAm~NA---~-~~vK~~---A~~~~v~~~n~e 253 (266)
T PRK10976 182 LEVMAGGVSKGHALEAVAKKLGYSLKDCIAFGDGMNDAEMLSMAG-KGCIMGNA---H-QRLKDL---LPELEVIGSNAD 253 (266)
T ss_pred EEEEcCCCChHHHHHHHHHHcCCCHHHeEEEcCCcccHHHHHHcC-CCeeecCC---c-HHHHHh---CCCCeecccCch
Confidence 467789999999999999999999999999999999999996533 24444433 1 223321 121 12221333
Q ss_pred HHHHHHHHHHH
Q 044617 224 EELKKILLHLI 234 (265)
Q Consensus 224 ~el~~~l~~~~ 234 (265)
.-+...|++++
T Consensus 254 dGVa~~l~~~~ 264 (266)
T PRK10976 254 DAVPHYLRKLY 264 (266)
T ss_pred HHHHHHHHHHh
Confidence 34888888765
No 79
>TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB. The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene.
Probab=99.62 E-value=1.2e-14 Score=117.62 Aligned_cols=100 Identities=12% Similarity=0.022 Sum_probs=72.8
Q ss_pred CCCChhHHHHHH-HHHHcCCcEEEEeCCCHHHHHHHHHhcCcccccceEEecCceecCCCceEEeeccccccCCCccccc
Q 044617 70 CPLDSHVAAAIK-SAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRILPYHDSTLSHHGCNLC 148 (265)
Q Consensus 70 ~~~~~g~~e~l~-~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp~~~~~~ 148 (265)
..++|++.++|+ .++++|++++||||+...+++++++..++.. .+.+++++..+.+.|.+.. + +
T Consensus 93 ~~l~pga~e~L~~~l~~~G~~v~IvSas~~~~~~~ia~~~~~~~-~~~~i~t~le~~~gg~~~g---------~-~---- 157 (210)
T TIGR01545 93 VTAFPLVAERLRQYLESSDADIWLITGSPQPLVEAVYFDSNFIH-RLNLIASQIERGNGGWVLP---------L-R---- 157 (210)
T ss_pred CCCCccHHHHHHHHHHhCCCEEEEEcCCcHHHHHHHHHhccccc-cCcEEEEEeEEeCCceEcC---------c-c----
Confidence 367999999995 7888999999999999999999998866533 2356787665543333211 0 1
Q ss_pred CCCCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccC
Q 044617 149 PSNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLK 187 (265)
Q Consensus 149 ~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~ 187 (265)
..|..|...+++++ +.+.+.++++|||.+|+.+...
T Consensus 158 c~g~~Kv~rl~~~~---~~~~~~~~aYsDS~~D~pmL~~ 193 (210)
T TIGR01545 158 CLGHEKVAQLEQKI---GSPLKLYSGYSDSKQDNPLLAF 193 (210)
T ss_pred CCChHHHHHHHHHh---CCChhheEEecCCcccHHHHHh
Confidence 22445777777666 3466788999999999999843
No 80
>PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional
Probab=99.62 E-value=2.1e-15 Score=129.94 Aligned_cols=109 Identities=16% Similarity=0.191 Sum_probs=83.2
Q ss_pred cCCCCChhHHHHHHHHHHcCCcEEEEeCC---------------CHHHHHHHHHhcCcccccceEEecCceecCCCceEE
Q 044617 68 RQCPLDSHVAAAIKSAHSLGCDLKIVSDA---------------NQFYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRI 132 (265)
Q Consensus 68 ~~~~~~~g~~e~l~~l~~~g~~~~ivS~~---------------~~~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~ 132 (265)
....++||+.++|++|+++|++++|+||+ ....+..+++.+++. |+.++.......
T Consensus 27 ~~~~l~pGV~e~L~~Lk~~G~kL~IvTNq~g~G~~~~~~~~l~~~~~~i~~iL~~~gl~--fd~i~i~~~~~s------- 97 (354)
T PRK05446 27 DKLAFEPGVIPALLKLQKAGYKLVMVTNQDGLGTDSFPQEDFDPPHNLMMQIFESQGIK--FDEVLICPHFPE------- 97 (354)
T ss_pred ccceECcCHHHHHHHHHhCCCeEEEEECCccccCccccHHHHhhHHHHHHHHHHHcCCc--eeeEEEeCCcCc-------
Confidence 35788999999999999999999999995 244566677888874 655543210000
Q ss_pred eeccccccCCCcccccCCCCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccCCCCCCeeeecC
Q 044617 133 LPYHDSTLSHHGCNLCPSNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRDCDFVMPRK 198 (265)
Q Consensus 133 ~~~~~~~~kp~~~~~~~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~~~~~~~~~ 198 (265)
.....+|| ++.++..+++++++++++++||||+.+|+.+|+++|...+++...
T Consensus 98 --d~~~~rKP-----------~p~~l~~a~~~l~v~~~~svmIGDs~sDi~aAk~aGi~~I~v~~~ 150 (354)
T PRK05446 98 --DNCSCRKP-----------KTGLVEEYLAEGAIDLANSYVIGDRETDVQLAENMGIKGIRYARE 150 (354)
T ss_pred --ccCCCCCC-----------CHHHHHHHHHHcCCCcccEEEEcCCHHHHHHHHHCCCeEEEEECC
Confidence 01112355 899999999999999999999999999999999988877777544
No 81
>TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities.
Probab=99.60 E-value=1.1e-14 Score=118.11 Aligned_cols=104 Identities=16% Similarity=0.168 Sum_probs=87.7
Q ss_pred CCCCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhc---CcccccceEEecCceecCCCceEEeeccccccCCCcc
Q 044617 69 QCPLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHH---GLLGCFSEIYTNPTYVDEQGRLRILPYHDSTLSHHGC 145 (265)
Q Consensus 69 ~~~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~---gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp~~~ 145 (265)
...++||+.++|++|+++|++++|+||+........+++. ++..+|+.++.. .. -.||
T Consensus 93 ~~~lypgv~e~L~~Lk~~G~~l~I~Sn~s~~~~~~~~~~~~~~~L~~~f~~~fd~--------------~~--g~KP--- 153 (220)
T TIGR01691 93 TSHLYPDVPPALEAWLQLGLRLAVYSSGSVPAQKLLFGHSDAGNLTPYFSGYFDT--------------TV--GLKT--- 153 (220)
T ss_pred ccCcCcCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHhhccccchhhhcceEEEe--------------Cc--ccCC---
Confidence 4578999999999999999999999999999888888775 566667665532 00 1255
Q ss_pred cccCCCCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccCCCCCCeeeecCC
Q 044617 146 NLCPSNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRDCDFVMPRKN 199 (265)
Q Consensus 146 ~~~~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~~~~~~~~~~ 199 (265)
++..+.++++++|++|++++||||+..|+.+|+++|+..+.+.+.|
T Consensus 154 --------~p~~y~~i~~~lgv~p~e~lfVgDs~~Di~AA~~AG~~ti~v~r~g 199 (220)
T TIGR01691 154 --------EAQSYVKIAGQLGSPPREILFLSDIINELDAARKAGLHTGQLVRPG 199 (220)
T ss_pred --------CHHHHHHHHHHhCcChhHEEEEeCCHHHHHHHHHcCCEEEEEECCC
Confidence 8999999999999999999999999999999999998888777765
No 82
>KOG3085 consensus Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=99.60 E-value=2.4e-14 Score=115.72 Aligned_cols=103 Identities=12% Similarity=0.135 Sum_probs=88.2
Q ss_pred CCCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCcccccceEEecCceecCCCceEEeeccccccCCCcccccC
Q 044617 70 CPLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRILPYHDSTLSHHGCNLCP 149 (265)
Q Consensus 70 ~~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp~~~~~~~ 149 (265)
..+.+++.++++.||+.|..++++||.... .+.++..+++..+||.++.+ ...+..||
T Consensus 112 ~~~~~~~~~~lq~lR~~g~~l~iisN~d~r-~~~~l~~~~l~~~fD~vv~S--------------~e~g~~KP------- 169 (237)
T KOG3085|consen 112 WKYLDGMQELLQKLRKKGTILGIISNFDDR-LRLLLLPLGLSAYFDFVVES--------------CEVGLEKP------- 169 (237)
T ss_pred ceeccHHHHHHHHHHhCCeEEEEecCCcHH-HHHHhhccCHHHhhhhhhhh--------------hhhccCCC-------
Confidence 355678889999999999999999988655 44888899999999988763 44455677
Q ss_pred CCCchHHHHHHHHHhcCCCCceEEEEcCC-CCCcccccCCCCCCeeeecC
Q 044617 150 SNLCKGFVLDHVCTSFGCGKQRFIYLGDG-RGDFCPTLKLRDCDFVMPRK 198 (265)
Q Consensus 150 ~~~~K~~~i~~~~~~~gi~~~~~v~vGD~-~~Di~~a~~~~~~~~~~~~~ 198 (265)
.|.+++.+++++++.|++|++|||. .||+++|+++|+..+.+.+.
T Consensus 170 ----Dp~If~~al~~l~v~Pee~vhIgD~l~nD~~gA~~~G~~ailv~~~ 215 (237)
T KOG3085|consen 170 ----DPRIFQLALERLGVKPEECVHIGDLLENDYEGARNLGWHAILVDNS 215 (237)
T ss_pred ----ChHHHHHHHHHhCCChHHeEEecCccccccHhHHHcCCEEEEEccc
Confidence 8999999999999999999999999 59999999999988887754
No 83
>PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional
Probab=99.60 E-value=2.5e-14 Score=120.55 Aligned_cols=80 Identities=9% Similarity=0.072 Sum_probs=55.3
Q ss_pred cccCCCCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccCCCCCCeeeecCCCchhhhhhcCCCeeeEEEEeCCCHHH
Q 044617 146 NLCPSNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRDCDFVMPRKNYPLWDRICSNPMLIKAKVHEWSSAEE 225 (265)
Q Consensus 146 ~~~~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e 225 (265)
++.+.+.+|+.+++.+++++|++++++++|||+.||+.|++.+| +.++-. .+... ++.. ++... .-++..-
T Consensus 192 ei~~~~~~K~~~l~~l~~~~gi~~~e~i~~GD~~NDi~m~~~ag---~~vamg-na~~~-lk~~---Ad~v~-~~n~~dG 262 (272)
T PRK10530 192 DIARKGNSKGKRLTQWVEAQGWSMKNVVAFGDNFNDISMLEAAG---LGVAMG-NADDA-VKAR---ADLVI-GDNTTPS 262 (272)
T ss_pred EEecCCCChHHHHHHHHHHcCCCHHHeEEeCCChhhHHHHHhcC---ceEEec-CchHH-HHHh---CCEEE-ecCCCCc
Confidence 56688899999999999999999999999999999999996644 344432 22222 3322 22322 2233334
Q ss_pred HHHHHHHHH
Q 044617 226 LKKILLHLI 234 (265)
Q Consensus 226 l~~~l~~~~ 234 (265)
+...|++++
T Consensus 263 v~~~l~~~~ 271 (272)
T PRK10530 263 IAEFIYSHV 271 (272)
T ss_pred HHHHHHHHh
Confidence 888777664
No 84
>PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional
Probab=99.59 E-value=2.5e-15 Score=119.14 Aligned_cols=80 Identities=15% Similarity=0.217 Sum_probs=68.6
Q ss_pred HHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCcccccceEEecCceecCCCceEEeeccccccCCCcccccCCCCchHHH
Q 044617 78 AAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRILPYHDSTLSHHGCNLCPSNLCKGFV 157 (265)
Q Consensus 78 e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp~~~~~~~~~~~K~~~ 157 (265)
..++.|+++|++++|+||+....+..+++.+|+..+|. +. ..|+..
T Consensus 55 ~~i~~L~~~Gi~v~I~T~~~~~~v~~~l~~lgl~~~f~---g~-------------------------------~~k~~~ 100 (183)
T PRK09484 55 YGIRCLLTSGIEVAIITGRKSKLVEDRMTTLGITHLYQ---GQ-------------------------------SNKLIA 100 (183)
T ss_pred HHHHHHHHCCCEEEEEeCCCcHHHHHHHHHcCCceeec---CC-------------------------------CcHHHH
Confidence 36777888999999999999999999999999865543 10 128999
Q ss_pred HHHHHHhcCCCCceEEEEcCCCCCcccccCCCCC
Q 044617 158 LDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRDC 191 (265)
Q Consensus 158 i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~~ 191 (265)
++.+++++|+++++++||||+.+|+.+++++|..
T Consensus 101 l~~~~~~~gl~~~ev~~VGDs~~D~~~a~~aG~~ 134 (183)
T PRK09484 101 FSDLLEKLAIAPEQVAYIGDDLIDWPVMEKVGLS 134 (183)
T ss_pred HHHHHHHhCCCHHHEEEECCCHHHHHHHHHCCCe
Confidence 9999999999999999999999999999876654
No 85
>TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668. This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family.
Probab=99.59 E-value=8.4e-15 Score=114.73 Aligned_cols=94 Identities=13% Similarity=0.134 Sum_probs=76.9
Q ss_pred CCCChhHHHHHHHHHHcCCcEEEEeCCC-HHHHHHHHHhcCcccccceEEecCceecCCCceEEeeccccccCCCccccc
Q 044617 70 CPLDSHVAAAIKSAHSLGCDLKIVSDAN-QFYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRILPYHDSTLSHHGCNLC 148 (265)
Q Consensus 70 ~~~~~g~~e~l~~l~~~g~~~~ivS~~~-~~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp~~~~~~ 148 (265)
..++|++.++|+.|+++|++++|+||+. ...+..+++.+++..+ . ...||
T Consensus 42 ~~~~pgv~e~L~~Lk~~g~~l~I~Sn~~~~~~~~~~~~~~gl~~~-----~------------------~~~KP------ 92 (170)
T TIGR01668 42 NEAYPALRDWIEELKAAGRKLLIVSNNAGEQRAKAVEKALGIPVL-----P------------------HAVKP------ 92 (170)
T ss_pred CCcChhHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHcCCEEE-----c------------------CCCCC------
Confidence 4678999999999999999999999998 5667777777775321 1 01255
Q ss_pred CCCCchHHHHHHHHHhcCCCCceEEEEcCCC-CCcccccCCCCCCeeeec
Q 044617 149 PSNLCKGFVLDHVCTSFGCGKQRFIYLGDGR-GDFCPTLKLRDCDFVMPR 197 (265)
Q Consensus 149 ~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~-~Di~~a~~~~~~~~~~~~ 197 (265)
++..+..+++++++++++++||||+. .|+.+|+++|...+.+..
T Consensus 93 -----~p~~~~~~l~~~~~~~~~~l~IGDs~~~Di~aA~~aGi~~i~v~~ 137 (170)
T TIGR01668 93 -----PGCAFRRAHPEMGLTSEQVAVVGDRLFTDVMGGNRNGSYTILVEP 137 (170)
T ss_pred -----ChHHHHHHHHHcCCCHHHEEEECCcchHHHHHHHHcCCeEEEEcc
Confidence 78999999999999999999999998 799999998887665543
No 86
>PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=99.56 E-value=1.4e-13 Score=116.17 Aligned_cols=62 Identities=21% Similarity=0.243 Sum_probs=53.9
Q ss_pred CCceEEEEecCCCCCCCCchHHHHHHhCchHHHHHHHccCChhHHHHHHHHHHHhCCCCHHHHHHHhcCCCCChhHHHHH
Q 044617 1 MADVVVVFDFDRTLIDDDSDNWVVTQMGLTHLFNQLRSTLPWNSLMDRMMKELHSQGKTVEDIANCLRQCPLDSHVAAAI 80 (265)
Q Consensus 1 M~~k~iifD~DGTL~ds~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~e~l 80 (265)
||+|+|++|+||||++++. .+.+++.++|
T Consensus 2 ~~~kli~~DlDGTLl~~~~---------------------------------------------------~~~~~~~~ai 30 (273)
T PRK00192 2 MMKLLVFTDLDGTLLDHHT---------------------------------------------------YSYEPAKPAL 30 (273)
T ss_pred CcceEEEEcCcccCcCCCC---------------------------------------------------cCcHHHHHHH
Confidence 7899999999999998722 3467889999
Q ss_pred HHHHHcCCcEEEEeCCCHHHHHHHHHhcCcccc
Q 044617 81 KSAHSLGCDLKIVSDANQFYIETIMEHHGLLGC 113 (265)
Q Consensus 81 ~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~ 113 (265)
+.|+++|++++++||+....+...++.+++..+
T Consensus 31 ~~l~~~Gi~~~iaTgR~~~~~~~~~~~l~l~~~ 63 (273)
T PRK00192 31 KALKEKGIPVIPCTSKTAAEVEVLRKELGLEDP 63 (273)
T ss_pred HHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCC
Confidence 999999999999999999999999999887654
No 87
>TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal. TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases.
Probab=99.56 E-value=3.3e-14 Score=115.78 Aligned_cols=122 Identities=14% Similarity=0.159 Sum_probs=82.2
Q ss_pred CCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCcccccceEEecCcee-cCCCce-------------------
Q 044617 71 PLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTNPTYV-DEQGRL------------------- 130 (265)
Q Consensus 71 ~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~~i~~~~~~~-d~~~~~------------------- 130 (265)
.+.+...+.|++|+++|++++++|++....+..+++.+++..+ .|..+...+ +..+..
T Consensus 18 ~i~~~~~~~i~~l~~~g~~~~~~TGR~~~~~~~~~~~l~~~~~--~i~~NGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (215)
T TIGR01487 18 MISERAIEAIRKAEKKGIPVSLVTGNTVPFARALAVLIGTSGP--VVAENGGVIFYNKEDIFLANMEEEWFLDEEKKKRF 95 (215)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCcchhHHHHHHHhCCCCc--EEEccCcEEEeCCCcEEEecccchhhHHHhhhhhh
Confidence 5678899999999999999999999999989888888887543 222222111 000000
Q ss_pred -----------E---Eeeccc---------------cccCCCcccccCCCCchHHHHHHHHHhcCCCCceEEEEcCCCCC
Q 044617 131 -----------R---ILPYHD---------------STLSHHGCNLCPSNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGD 181 (265)
Q Consensus 131 -----------~---~~~~~~---------------~~~kp~~~~~~~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~D 181 (265)
. +..... ....+...+.++.+.+|+.+++.+++++|++++++++|||+.||
T Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~iGDs~ND 175 (215)
T TIGR01487 96 PRDRLSNEYPRASLVIMREGKDVDEVREIIKERGLNLVDSGFAIHIMKKGVDKGVGVEKLKELLGIKPEEVAAIGDSEND 175 (215)
T ss_pred hhhhcccccceeEEEEecCCccHHHHHHHHHhCCeEEEecCceEEEecCCCChHHHHHHHHHHhCCCHHHEEEECCCHHH
Confidence 0 000000 00001122455789999999999999999999999999999999
Q ss_pred cccccCCCCCCeeeec
Q 044617 182 FCPTLKLRDCDFVMPR 197 (265)
Q Consensus 182 i~~a~~~~~~~~~~~~ 197 (265)
+.|++. +++.++-
T Consensus 176 ~~ml~~---ag~~vam 188 (215)
T TIGR01487 176 IDLFRV---VGFKVAV 188 (215)
T ss_pred HHHHHh---CCCeEEc
Confidence 999954 4444443
No 88
>TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit. Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases.
Probab=99.55 E-value=1.7e-15 Score=117.86 Aligned_cols=88 Identities=11% Similarity=0.148 Sum_probs=72.2
Q ss_pred CCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCcccccceEEecCceecCCCceEEeeccccccCCCcccccCC
Q 044617 71 PLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRILPYHDSTLSHHGCNLCPS 150 (265)
Q Consensus 71 ~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp~~~~~~~~ 150 (265)
....+. -|..|+++|++++|+||+....+...++.+|+..+|+.+ ||
T Consensus 36 ~~~D~~--~~~~L~~~Gi~laIiT~k~~~~~~~~l~~lgi~~~f~~~-----------------------kp-------- 82 (169)
T TIGR02726 36 DIKDGM--GVIVLQLCGIDVAIITSKKSGAVRHRAEELKIKRFHEGI-----------------------KK-------- 82 (169)
T ss_pred ecchHH--HHHHHHHCCCEEEEEECCCcHHHHHHHHHCCCcEEEecC-----------------------CC--------
Confidence 334444 677888999999999999999999999999997665421 23
Q ss_pred CCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccCCCCCCeeeec
Q 044617 151 NLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRDCDFVMPR 197 (265)
Q Consensus 151 ~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~~~~~~~~ 197 (265)
|+..++.++++++++++++++|||+.||+.+++. +++.++-
T Consensus 83 ---kp~~~~~~~~~l~~~~~ev~~iGD~~nDi~~~~~---ag~~~am 123 (169)
T TIGR02726 83 ---KTEPYAQMLEEMNISDAEVCYVGDDLVDLSMMKR---VGLAVAV 123 (169)
T ss_pred ---CHHHHHHHHHHcCcCHHHEEEECCCHHHHHHHHH---CCCeEEC
Confidence 8999999999999999999999999999999965 4444443
No 89
>PLN02887 hydrolase family protein
Probab=99.55 E-value=7.3e-14 Score=127.69 Aligned_cols=80 Identities=11% Similarity=0.191 Sum_probs=54.9
Q ss_pred ccccCCCCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccCCCCCCeeeecCCCchhhhhhcCCCeeeEEEEeCCCHH
Q 044617 145 CNLCPSNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRDCDFVMPRKNYPLWDRICSNPMLIKAKVHEWSSAE 224 (265)
Q Consensus 145 ~~~~~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (265)
.++++.|++|+.+++.+++.+|++++++++|||+.||+.|.+. +++.++-.+. . ..+++. ++. +..-++.+
T Consensus 499 lEI~p~gvSKG~ALk~L~e~lGI~~eeviAFGDs~NDIeMLe~---AG~gVAMgNA-~-eeVK~~---Ad~-VT~sNdED 569 (580)
T PLN02887 499 LEIVPPGTSKGNGVKMLLNHLGVSPDEIMAIGDGENDIEMLQL---ASLGVALSNG-A-EKTKAV---ADV-IGVSNDED 569 (580)
T ss_pred EEEecCCCCHHHHHHHHHHHcCCCHHHEEEEecchhhHHHHHH---CCCEEEeCCC-C-HHHHHh---CCE-EeCCCCcC
Confidence 4677899999999999999999999999999999999999954 4444443321 1 223322 222 22213333
Q ss_pred HHHHHHHHH
Q 044617 225 ELKKILLHL 233 (265)
Q Consensus 225 el~~~l~~~ 233 (265)
-+...|+++
T Consensus 570 GVA~aLek~ 578 (580)
T PLN02887 570 GVADAIYRY 578 (580)
T ss_pred HHHHHHHHh
Confidence 377777765
No 90
>TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily. catalyze the same reaction as SPP.
Probab=99.52 E-value=1.2e-13 Score=113.23 Aligned_cols=122 Identities=16% Similarity=0.171 Sum_probs=80.5
Q ss_pred CCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCcccccceEEecCcee-cCC----------------------
Q 044617 71 PLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTNPTYV-DEQ---------------------- 127 (265)
Q Consensus 71 ~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~~i~~~~~~~-d~~---------------------- 127 (265)
.+.+...+.|++++++|++++++|++....+..+++.+++..+ .|..+...+ +..
T Consensus 15 ~i~~~~~~al~~l~~~Gi~~~~aTGR~~~~~~~~~~~l~~~~~--~i~~nGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (225)
T TIGR01482 15 AINESALEAIRKAESVGIPVVLVTGNSVQFARALAKLIGTPDP--VIAENGGEISYNEGMDDIFLAYLEEEWFLDIVIAK 92 (225)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCCCe--EEEecCcEEEeCCCCceEEecccCHHHHHHHHHhc
Confidence 4567788888889999999999999888888888887775433 111111100 000
Q ss_pred ---------------CceEEeeccc---------c-------ccCCCcccccCCCCchHHHHHHHHHhcCCCCceEEEEc
Q 044617 128 ---------------GRLRILPYHD---------S-------TLSHHGCNLCPSNLCKGFVLDHVCTSFGCGKQRFIYLG 176 (265)
Q Consensus 128 ---------------~~~~~~~~~~---------~-------~~kp~~~~~~~~~~~K~~~i~~~~~~~gi~~~~~v~vG 176 (265)
....+..... . ...+..+++++.+.+|+.+++++++++|++++++++||
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~~G 172 (225)
T TIGR01482 93 TFPFSRLKVQYPRRASLVKMRYGIDVDTVREIIKELGLNLVAVDSGFDIHILPQGVNKGVAVKKLKEKLGIKPGETLVCG 172 (225)
T ss_pred ccchhhhccccccccceEEEeecCCHHHHHHHHHhcCceEEEecCCcEEEEeeCCCCHHHHHHHHHHHhCCCHHHEEEEC
Confidence 0000000000 0 00122336678899999999999999999999999999
Q ss_pred CCCCCcccccCCCCCCeeeec
Q 044617 177 DGRGDFCPTLKLRDCDFVMPR 197 (265)
Q Consensus 177 D~~~Di~~a~~~~~~~~~~~~ 197 (265)
|+.||+.|++. +++.++-
T Consensus 173 D~~NDi~m~~~---ag~~vam 190 (225)
T TIGR01482 173 DSENDIDLFEV---PGFGVAV 190 (225)
T ss_pred CCHhhHHHHHh---cCceEEc
Confidence 99999999955 4444443
No 91
>COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only]
Probab=99.51 E-value=1.4e-13 Score=103.62 Aligned_cols=94 Identities=13% Similarity=0.126 Sum_probs=81.9
Q ss_pred CCCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCcccccceEEecCceecCCCceEEeeccccccCCCcccccC
Q 044617 70 CPLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRILPYHDSTLSHHGCNLCP 149 (265)
Q Consensus 70 ~~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp~~~~~~~ 149 (265)
....|++++.+..+++.|++++|+||+...-+...++.+|+. .++.+ .||
T Consensus 45 ~~~tpe~~~W~~e~k~~gi~v~vvSNn~e~RV~~~~~~l~v~----fi~~A-------------------~KP------- 94 (175)
T COG2179 45 PDATPELRAWLAELKEAGIKVVVVSNNKESRVARAAEKLGVP----FIYRA-------------------KKP------- 94 (175)
T ss_pred CCCCHHHHHHHHHHHhcCCEEEEEeCCCHHHHHhhhhhcCCc----eeecc-------------------cCc-------
Confidence 456799999999999999999999999999999999999964 44442 245
Q ss_pred CCCchHHHHHHHHHhcCCCCceEEEEcCCC-CCcccccCCCCCCeeeec
Q 044617 150 SNLCKGFVLDHVCTSFGCGKQRFIYLGDGR-GDFCPTLKLRDCDFVMPR 197 (265)
Q Consensus 150 ~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~-~Di~~a~~~~~~~~~~~~ 197 (265)
-+..+.++++++++++++|+||||.. +|+.+++++|+.++.+..
T Consensus 95 ----~~~~fr~Al~~m~l~~~~vvmVGDqL~TDVlggnr~G~~tIlV~P 139 (175)
T COG2179 95 ----FGRAFRRALKEMNLPPEEVVMVGDQLFTDVLGGNRAGMRTILVEP 139 (175)
T ss_pred ----cHHHHHHHHHHcCCChhHEEEEcchhhhhhhcccccCcEEEEEEE
Confidence 57899999999999999999999995 999999999988877764
No 92
>smart00577 CPDc catalytic domain of ctd-like phosphatases.
Probab=99.51 E-value=2.2e-14 Score=109.86 Aligned_cols=98 Identities=10% Similarity=0.011 Sum_probs=77.5
Q ss_pred CCCCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCccc-ccceEEecCceecCCCceEEeeccccccCCCcccc
Q 044617 69 QCPLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLG-CFSEIYTNPTYVDEQGRLRILPYHDSTLSHHGCNL 147 (265)
Q Consensus 69 ~~~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~-~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp~~~~~ 147 (265)
...++||+.++|++|+ ++++++|+|++...+++.+++++++.. +|+.+++.+..
T Consensus 43 ~v~l~pG~~e~L~~L~-~~~~l~I~Ts~~~~~~~~il~~l~~~~~~f~~i~~~~d~------------------------ 97 (148)
T smart00577 43 YVKKRPGVDEFLKRAS-ELFELVVFTAGLRMYADPVLDLLDPKKYFGYRRLFRDEC------------------------ 97 (148)
T ss_pred EEEECCCHHHHHHHHH-hccEEEEEeCCcHHHHHHHHHHhCcCCCEeeeEEECccc------------------------
Confidence 4577999999999999 479999999999999999999999865 45777774210
Q ss_pred cCCCCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccCCCCCCeeeecC
Q 044617 148 CPSNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRDCDFVMPRK 198 (265)
Q Consensus 148 ~~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~~~~~~~~~ 198 (265)
...||. +.+.++++|++|++|++|||+.+|+.++++ +++.+-.+
T Consensus 98 ---~~~KP~-~~k~l~~l~~~p~~~i~i~Ds~~~~~aa~~---ngI~i~~f 141 (148)
T smart00577 98 ---VFVKGK-YVKDLSLLGRDLSNVIIIDDSPDSWPFHPE---NLIPIKPW 141 (148)
T ss_pred ---cccCCe-EeecHHHcCCChhcEEEEECCHHHhhcCcc---CEEEecCc
Confidence 011444 778889999999999999999999999844 44444443
No 93
>KOG3109 consensus Haloacid dehalogenase-like hydrolase [General function prediction only]
Probab=99.51 E-value=4.7e-13 Score=104.85 Aligned_cols=174 Identities=13% Similarity=0.143 Sum_probs=117.7
Q ss_pred ceEEEEecCCCCCCCCch----------HHHHHHhCchHHHHHHHccCChhHHHHHHHHHHHhCC--CCHHHHHHHhc--
Q 044617 3 DVVVVFDFDRTLIDDDSD----------NWVVTQMGLTHLFNQLRSTLPWNSLMDRMMKELHSQG--KTVEDIANCLR-- 68 (265)
Q Consensus 3 ~k~iifD~DGTL~ds~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~-- 68 (265)
++.++||+|.||...++. .++.+++|+++.-...+....+..+.-.+.. +...+ ...+++.++++
T Consensus 15 ~~~l~FDiDdtLYp~St~i~~~~~~nI~~f~~eklgi~~e~a~~L~~~~yk~YG~t~aG-L~~~~~~~d~deY~~~V~~~ 93 (244)
T KOG3109|consen 15 YKCLFFDIDDTLYPLSTGIQLMMRNNIQEFFVEKLGISEEEAEELRESLYKEYGLTMAG-LKAVGYIFDADEYHRFVHGR 93 (244)
T ss_pred ceEEEEecccccccCchhHHHHHHHHHHHHHHHHhCCChhhhHHHHHHHHHHHhHHHHH-HHHhcccCCHHHHHHHhhcc
Confidence 578999999999997652 4455666665432221111111111111111 11111 12344444432
Q ss_pred ----CCCCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCcccccceEEecCceecCCCceEEeeccccccCCCc
Q 044617 69 ----QCPLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRILPYHDSTLSHHG 144 (265)
Q Consensus 69 ----~~~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp~~ 144 (265)
.+.+.+-.+++|-.|+.++ ..+.||+....+.++++.+|++++|+.+++.+..-.. .....-||
T Consensus 94 LPlq~LkPD~~LRnlLL~l~~r~--k~~FTNa~k~HA~r~Lk~LGieDcFegii~~e~~np~--------~~~~vcKP-- 161 (244)
T KOG3109|consen 94 LPLQDLKPDPVLRNLLLSLKKRR--KWIFTNAYKVHAIRILKKLGIEDCFEGIICFETLNPI--------EKTVVCKP-- 161 (244)
T ss_pred CcHhhcCCCHHHHHHHHhCcccc--EEEecCCcHHHHHHHHHHhChHHhccceeEeeccCCC--------CCceeecC--
Confidence 3566778889999998874 8889999999999999999999999999985321100 01111123
Q ss_pred ccccCCCCchHHHHHHHHHhcCCC-CceEEEEcCCCCCcccccCCCCCCeeeecC
Q 044617 145 CNLCPSNLCKGFVLDHVCTSFGCG-KQRFIYLGDGRGDFCPTLKLRDCDFVMPRK 198 (265)
Q Consensus 145 ~~~~~~~~~K~~~i~~~~~~~gi~-~~~~v~vGD~~~Di~~a~~~~~~~~~~~~~ 198 (265)
.+.+++.+++..|++ |.++++|.||.+.++.|++.|+.++++...
T Consensus 162 ---------~~~afE~a~k~agi~~p~~t~FfDDS~~NI~~ak~vGl~tvlv~~~ 207 (244)
T KOG3109|consen 162 ---------SEEAFEKAMKVAGIDSPRNTYFFDDSERNIQTAKEVGLKTVLVGRE 207 (244)
T ss_pred ---------CHHHHHHHHHHhCCCCcCceEEEcCchhhHHHHHhccceeEEEEee
Confidence 469999999999998 999999999999999999999988887754
No 94
>PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification []. This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A ....
Probab=99.51 E-value=1.6e-13 Score=113.63 Aligned_cols=123 Identities=18% Similarity=0.258 Sum_probs=88.5
Q ss_pred CCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCcccccceEEecCcee-cCCCc--------------------
Q 044617 71 PLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTNPTYV-DEQGR-------------------- 129 (265)
Q Consensus 71 ~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~~i~~~~~~~-d~~~~-------------------- 129 (265)
.+.+...+.|+.++++|++++++|++....+..++..+++..+ .|..+...+ ...+.
T Consensus 15 ~i~~~~~~al~~l~~~g~~~~i~TGR~~~~~~~~~~~~~~~~~--~I~~nGa~i~~~~~~~l~~~~i~~~~~~~i~~~~~ 92 (254)
T PF08282_consen 15 KISPETIEALKELQEKGIKLVIATGRSYSSIKRLLKELGIDDY--FICSNGALIDDPKGKILYEKPIDSDDVKKILKYLK 92 (254)
T ss_dssp SSCHHHHHHHHHHHHTTCEEEEECSSTHHHHHHHHHHTTHCSE--EEEGGGTEEEETTTEEEEEESB-HHHHHHHHHHHH
T ss_pred eeCHHHHHHHHhhcccceEEEEEccCcccccccccccccchhh--hcccccceeeecccccchhhheeccchhheeehhh
Confidence 4779999999999999999999999999999999999887633 333333332 11000
Q ss_pred -------------------------------------------------eEEe----------------ec-----cccc
Q 044617 130 -------------------------------------------------LRIL----------------PY-----HDST 139 (265)
Q Consensus 130 -------------------------------------------------~~~~----------------~~-----~~~~ 139 (265)
..+. .. ....
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ki~~~~~~~~~~~l~~~l~~~~~~~~~~~~ 172 (254)
T PF08282_consen 93 EHNISFFFYTDDDIYIYENKDEEELFFEHKFFNFKESIVSEDDLEDEEIFKILFFPDPEDLEQLREELKKKFPNLIDVVR 172 (254)
T ss_dssp HTTCEEEEEESSEEEESSTTCHHHHHHHHHHTSCEEEESHHHHHHCSSESEEEEESCHHHHHHHHHHHHHHHTTTEEEEE
T ss_pred hcccccccccceeeecccccccchhhhhhcccccccccccccccccccceeeeccccchhhhhhhhhhccccCcceeEEE
Confidence 0000 00 0001
Q ss_pred cCCCcccccCCCCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccCCCCCCeeeecC
Q 044617 140 LSHHGCNLCPSNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRDCDFVMPRK 198 (265)
Q Consensus 140 ~kp~~~~~~~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~~~~~~~~~ 198 (265)
..+...++.+.+.+|..+++.+++.+|++++++++|||+.||+.|.+. ++..++-.
T Consensus 173 ~~~~~lei~~~~vsK~~ai~~l~~~~~i~~~~~~~~GD~~ND~~Ml~~---~~~~~am~ 228 (254)
T PF08282_consen 173 SSPYFLEITPKGVSKGSAIKYLLEYLGISPEDIIAFGDSENDIEMLEL---AGYSVAMG 228 (254)
T ss_dssp EETTEEEEEETTSSHHHHHHHHHHHHTTSGGGEEEEESSGGGHHHHHH---SSEEEEET
T ss_pred ecccceEEeeCCCCHHHHHHHHhhhcccccceeEEeecccccHhHHhh---cCeEEEEc
Confidence 123334667999999999999999999999999999999999999954 55555543
No 95
>KOG2914 consensus Predicted haloacid-halidohydrolase and related hydrolases [General function prediction only]
Probab=99.51 E-value=1.5e-13 Score=110.73 Aligned_cols=171 Identities=11% Similarity=0.110 Sum_probs=115.2
Q ss_pred ceEEEEecCCCCCCCCch-----HHHHHHhCchHHHHHHHccCC--hhHHHHHHHHHHHhCCCCHHHH--------HHHh
Q 044617 3 DVVVVFDFDRTLIDDDSD-----NWVVTQMGLTHLFNQLRSTLP--WNSLMDRMMKELHSQGKTVEDI--------ANCL 67 (265)
Q Consensus 3 ~k~iifD~DGTL~ds~~~-----~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~--------~~~~ 67 (265)
.-+++||+||||+|++.. ..++.+.+.+.........++ -.+....+...+ ....+.+++ .+.+
T Consensus 10 ~~~~lfD~dG~lvdte~~y~~~~~~~~~~ygk~~~~~~~~~~mG~~~~eaa~~~~~~~-~dp~s~ee~~~e~~~~~~~~~ 88 (222)
T KOG2914|consen 10 VSACLFDMDGTLVDTEDLYTEAWQELLDRYGKPYPWDVKVKSMGKRTSEAARLFVKKL-PDPVSREEFNKEEEEILDRLF 88 (222)
T ss_pred eeeEEEecCCcEEecHHHHHHHHHHHHHHcCCCChHHHHHHHcCCCHHHHHHHHHhhc-CCCCCHHHHHHHHHHHHHHhc
Confidence 457999999999999753 445555565322111111121 122222222111 112222222 2344
Q ss_pred cCCCCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcC-cccccceEEecCceecCCCceEEeeccccccCCCccc
Q 044617 68 RQCPLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHG-LLGCFSEIYTNPTYVDEQGRLRILPYHDSTLSHHGCN 146 (265)
Q Consensus 68 ~~~~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~g-l~~~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp~~~~ 146 (265)
....+.||+.+++..|+.+|++++++|+...........+++ +...|..++.. + + ......||
T Consensus 89 ~~~~~~PGa~kLv~~L~~~gip~alat~s~~~~~~~k~~~~~~~~~~f~~~v~~----d--~------~~v~~gKP---- 152 (222)
T KOG2914|consen 89 MNSILMPGAEKLVNHLKNNGIPVALATSSTSASFELKISRHEDIFKNFSHVVLG----D--D------PEVKNGKP---- 152 (222)
T ss_pred cccccCCcHHHHHHHHHhCCCCeeEEecCCcccHHHHHHHhhHHHHhcCCCeec----C--C------ccccCCCC----
Confidence 577889999999999999999999999998888888777776 65556654441 1 0 11112245
Q ss_pred ccCCCCchHHHHHHHHHhcCCCC-ceEEEEcCCCCCcccccCCCCCCeeeec
Q 044617 147 LCPSNLCKGFVLDHVCTSFGCGK-QRFIYLGDGRGDFCPTLKLRDCDFVMPR 197 (265)
Q Consensus 147 ~~~~~~~K~~~i~~~~~~~gi~~-~~~v~vGD~~~Di~~a~~~~~~~~~~~~ 197 (265)
.|.++..+++.+|.++ +.+++++|+.+.+++|+++|+..+.++.
T Consensus 153 -------~Pdi~l~A~~~l~~~~~~k~lVfeds~~Gv~aa~aagm~vi~v~~ 197 (222)
T KOG2914|consen 153 -------DPDIYLKAAKRLGVPPPSKCLVFEDSPVGVQAAKAAGMQVVGVAT 197 (222)
T ss_pred -------CchHHHHHHHhcCCCCccceEEECCCHHHHHHHHhcCCeEEEecC
Confidence 8999999999999888 9999999999999999998887777776
No 96
>COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism]
Probab=99.51 E-value=9.9e-14 Score=107.75 Aligned_cols=108 Identities=16% Similarity=0.148 Sum_probs=85.8
Q ss_pred CCCCChhHHHHHHHHHHcCCcEEEEeCC---------------CHHHHHHHHHhcCcccccceEEecCceecCCCceEEe
Q 044617 69 QCPLDSHVAAAIKSAHSLGCDLKIVSDA---------------NQFYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRIL 133 (265)
Q Consensus 69 ~~~~~~g~~e~l~~l~~~g~~~~ivS~~---------------~~~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~ 133 (265)
...+.||+.+.+..|++.|++++++||. .+.++...++..|.. |+.++..
T Consensus 29 ~~~~~~g~i~al~~l~~~gy~lVvvTNQsGi~rgyf~~~~f~~~~~~m~~~l~~~gv~--id~i~~C------------- 93 (181)
T COG0241 29 DFQFIPGVIPALLKLQRAGYKLVVVTNQSGIGRGYFTEADFDKLHNKMLKILASQGVK--IDGILYC------------- 93 (181)
T ss_pred HhccCccHHHHHHHHHhCCCeEEEEECCCCccccCccHHHHHHHHHHHHHHHHHcCCc--cceEEEC-------------
Confidence 5678999999999999999999999993 233466666777764 7777765
Q ss_pred eccccccCCCcccccCCCCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccCCCCCCeeeecC
Q 044617 134 PYHDSTLSHHGCNLCPSNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRDCDFVMPRK 198 (265)
Q Consensus 134 ~~~~~~~kp~~~~~~~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~~~~~~~~~ 198 (265)
|+++. +.|.+...|+.+++.+++++++++++.++|||...|+++|.+++..++.+.++
T Consensus 94 ph~p~-------~~c~cRKP~~gm~~~~~~~~~iD~~~s~~VGD~~~Dlq~a~n~gi~~~~~~~~ 151 (181)
T COG0241 94 PHHPE-------DNCDCRKPKPGMLLSALKEYNIDLSRSYVVGDRLTDLQAAENAGIKGVLVLTG 151 (181)
T ss_pred CCCCC-------CCCcccCCChHHHHHHHHHhCCCccceEEecCcHHHHHHHHHCCCCceEEEcC
Confidence 33321 12344455999999999999999999999999999999999999987777665
No 97
>PRK11009 aphA acid phosphatase/phosphotransferase; Provisional
Probab=99.48 E-value=1.6e-13 Score=112.25 Aligned_cols=95 Identities=11% Similarity=0.033 Sum_probs=71.8
Q ss_pred CCCCChhHHHHHHHHHHcCCcEEEEeCC----CHHHHHHHHHhcCc--ccccceEEecCceecCCCceEEeeccccccCC
Q 044617 69 QCPLDSHVAAAIKSAHSLGCDLKIVSDA----NQFYIETIMEHHGL--LGCFSEIYTNPTYVDEQGRLRILPYHDSTLSH 142 (265)
Q Consensus 69 ~~~~~~g~~e~l~~l~~~g~~~~ivS~~----~~~~i~~~l~~~gl--~~~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp 142 (265)
...++||++++|+.|+++|++++++||+ ....++.+++.+|+ .++|+.+++.+. . .|+
T Consensus 112 ~a~p~~Ga~elL~~L~~~G~~I~iVTnR~~~k~~~t~~~Llk~~gip~~~~f~vil~gd~------------~----~K~ 175 (237)
T PRK11009 112 FSIPKEVARQLIDMHVKRGDSIYFITGRTATKTETVSKTLADDFHIPADNMNPVIFAGDK------------P----GQY 175 (237)
T ss_pred cCcchHHHHHHHHHHHHCCCeEEEEeCCCCcccHHHHHHHHHHcCCCcccceeEEEcCCC------------C----CCC
Confidence 4578899999999999999999999995 45678888888999 788877776310 0 112
Q ss_pred CcccccCCCCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccCCCCCCeeeec
Q 044617 143 HGCNLCPSNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRDCDFVMPR 197 (265)
Q Consensus 143 ~~~~~~~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~~~~~~~~ 197 (265)
.|.. +++++++ ++||||+.+|+.+|+++|...+.+..
T Consensus 176 ----------~K~~----~l~~~~i----~I~IGDs~~Di~aA~~AGi~~I~v~~ 212 (237)
T PRK11009 176 ----------TKTQ----WLKKKNI----RIFYGDSDNDITAAREAGARGIRILR 212 (237)
T ss_pred ----------CHHH----HHHhcCC----eEEEcCCHHHHHHHHHcCCcEEEEec
Confidence 1333 4445654 89999999999999998887666654
No 98
>PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=99.48 E-value=1.8e-12 Score=109.20 Aligned_cols=86 Identities=13% Similarity=0.063 Sum_probs=57.3
Q ss_pred cccCCCCchHHHHHHHHHhcCC---CCceEEEEcCCCCCcccccCCCCCCeeeecCCCc-hhhhhhcCCCeeeEEEEeCC
Q 044617 146 NLCPSNLCKGFVLDHVCTSFGC---GKQRFIYLGDGRGDFCPTLKLRDCDFVMPRKNYP-LWDRICSNPMLIKAKVHEWS 221 (265)
Q Consensus 146 ~~~~~~~~K~~~i~~~~~~~gi---~~~~~v~vGD~~~Di~~a~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 221 (265)
++++.+.+|+.+++.+++.+|+ +++++++|||+.||+.|.+ .+++.++-.+.. ....+......++ .+..-.
T Consensus 180 Ei~~~g~sKg~al~~l~~~lgi~~~~~~~viafGDs~NDi~Ml~---~ag~gvAM~~~~~~~~~l~~~~~~~~-~~~~~~ 255 (271)
T PRK03669 180 HVLDASAGKDQAANWLIATYQQLSGTRPTTLGLGDGPNDAPLLD---VMDYAVVVKGLNREGVHLQDDDPARV-YRTQRE 255 (271)
T ss_pred EEecCCCCHHHHHHHHHHHHHhhcCCCceEEEEcCCHHHHHHHH---hCCEEEEecCCCCCCcccccccCCce-EeccCC
Confidence 6678999999999999999999 9999999999999999994 455555544322 1111211111111 122234
Q ss_pred CHHHHHHHHHHHHH
Q 044617 222 SAEELKKILLHLIG 235 (265)
Q Consensus 222 ~~~el~~~l~~~~~ 235 (265)
..+-+.+.|+.+++
T Consensus 256 ~~~g~~~~l~~~~~ 269 (271)
T PRK03669 256 GPEGWREGLDHFFS 269 (271)
T ss_pred CcHHHHHHHHHHHh
Confidence 44558887777764
No 99
>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B.
Probab=99.46 E-value=2.2e-13 Score=108.63 Aligned_cols=96 Identities=21% Similarity=0.191 Sum_probs=71.5
Q ss_pred hhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCcccccceEEecCceecCCCc-eEEeeccccccCCCcccccCCCC
Q 044617 74 SHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTNPTYVDEQGR-LRILPYHDSTLSHHGCNLCPSNL 152 (265)
Q Consensus 74 ~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~-~~~~~~~~~~~kp~~~~~~~~~~ 152 (265)
+++.++|+.++++|++++|+|++...+++.+++.+|+... .+++++. .++.+. ........ ..+
T Consensus 92 ~~~~e~i~~~~~~~~~v~IvS~~~~~~i~~~~~~~~i~~~--~v~~~~~-~~~~~~~~~~~~~~~-----------~~~- 156 (192)
T PF12710_consen 92 PDAMELIRELKDNGIKVVIVSGSPDEIIEPIAERLGIDDD--NVIGNEL-FDNGGGIFTGRITGS-----------NCG- 156 (192)
T ss_dssp TTHHHHHHHHHHTTSEEEEEEEEEHHHHHHHHHHTTSSEG--GEEEEEE-ECTTCCEEEEEEEEE-----------EES-
T ss_pred hhHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCce--EEEEEee-eecccceeeeeECCC-----------CCC-
Confidence 5555999999999999999999999999999999998643 4777766 443321 11110100 012
Q ss_pred chHHHHHHH---HHhcCCCCceEEEEcCCCCCcccc
Q 044617 153 CKGFVLDHV---CTSFGCGKQRFIYLGDGRGDFCPT 185 (265)
Q Consensus 153 ~K~~~i~~~---~~~~gi~~~~~v~vGD~~~Di~~a 185 (265)
+|...++.+ ... +.+..++++||||.+|+.++
T Consensus 157 ~K~~~l~~~~~~~~~-~~~~~~~~~iGDs~~D~~~l 191 (192)
T PF12710_consen 157 GKAEALKELYIRDEE-DIDPDRVIAIGDSINDLPML 191 (192)
T ss_dssp HHHHHHHHHHHHHHH-THTCCEEEEEESSGGGHHHH
T ss_pred cHHHHHHHHHHHhhc-CCCCCeEEEEECCHHHHHHh
Confidence 499999999 555 77889999999999999876
No 100
>PHA02530 pseT polynucleotide kinase; Provisional
Probab=99.46 E-value=2e-13 Score=116.71 Aligned_cols=110 Identities=10% Similarity=0.024 Sum_probs=87.2
Q ss_pred CCCCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCccc-ccceEEecCceecCCCceEEeeccccccCCCcccc
Q 044617 69 QCPLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLG-CFSEIYTNPTYVDEQGRLRILPYHDSTLSHHGCNL 147 (265)
Q Consensus 69 ~~~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~-~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp~~~~~ 147 (265)
...++|++.++|+.|+++|++++++||+........++.+++.. +|+.+++... ... -.++. ...||
T Consensus 185 ~~~~~~~~~~~l~~l~~~g~~i~i~T~r~~~~~~~~l~~l~~~~~~f~~i~~~~~----~~~-~~~~~--~~~kp----- 252 (300)
T PHA02530 185 EDKPNPMVVELVKMYKAAGYEIIVVSGRDGVCEEDTVEWLRQTDIWFDDLIGRPP----DMH-FQREQ--GDKRP----- 252 (300)
T ss_pred cCCCChhHHHHHHHHHhCCCEEEEEeCCChhhHHHHHHHHHHcCCchhhhhCCcc----hhh-hcccC--CCCCC-----
Confidence 45789999999999999999999999999999999999999986 8888877531 000 00001 11245
Q ss_pred cCCCCchHHHHHHHHHhcCC-CCceEEEEcCCCCCcccccCCCCCCeeee
Q 044617 148 CPSNLCKGFVLDHVCTSFGC-GKQRFIYLGDGRGDFCPTLKLRDCDFVMP 196 (265)
Q Consensus 148 ~~~~~~K~~~i~~~~~~~gi-~~~~~v~vGD~~~Di~~a~~~~~~~~~~~ 196 (265)
++..++.++++++. ++++++||||+.+|+.+|+++|...+.+.
T Consensus 253 ------~p~~~~~~l~~~~~~~~~~~~~vgD~~~d~~~a~~~Gi~~i~v~ 296 (300)
T PHA02530 253 ------DDVVKEEIFWEKIAPKYDVLLAVDDRDQVVDMWRRIGLECWQVA 296 (300)
T ss_pred ------cHHHHHHHHHHHhccCceEEEEEcCcHHHHHHHHHhCCeEEEec
Confidence 78999999999988 57999999999999999988777655553
No 101
>TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein. This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate.
Probab=99.45 E-value=9.3e-13 Score=107.64 Aligned_cols=49 Identities=16% Similarity=0.230 Sum_probs=42.0
Q ss_pred ccccCCCCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccCCCCCCeeee
Q 044617 145 CNLCPSNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRDCDFVMP 196 (265)
Q Consensus 145 ~~~~~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~~~~~~~ 196 (265)
.++.+.+.+|+.+++.+++++|++++++++|||+.||+.|.+ .+++.++
T Consensus 171 ~ei~~~~~~Kg~al~~l~~~lgi~~~~vi~~GD~~NDi~ml~---~ag~~va 219 (221)
T TIGR02463 171 SHVLGASSSKGKAANWLKATYNQPDVKTLGLGDGPNDLPLLE---VADYAVV 219 (221)
T ss_pred eEEecCCCCHHHHHHHHHHHhCCCCCcEEEECCCHHHHHHHH---hCCceEE
Confidence 356688999999999999999999999999999999999994 4444443
No 102
>TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase. Note that the EC number for the kinase function is: 2.7.1.78
Probab=99.45 E-value=5e-13 Score=120.66 Aligned_cols=92 Identities=14% Similarity=0.140 Sum_probs=76.0
Q ss_pred CChhHHHHHHHHHHcCCcEEEEeCCCH------------HHHHHHHHhcCcccccceEEecCceecCCCceEEeeccccc
Q 044617 72 LDSHVAAAIKSAHSLGCDLKIVSDANQ------------FYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRILPYHDST 139 (265)
Q Consensus 72 ~~~g~~e~l~~l~~~g~~~~ivS~~~~------------~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~ 139 (265)
++||+.+.|+.|++.|++++|+||... ..+..+++.+|+. |+.+++. .....
T Consensus 198 l~pgV~e~L~~L~~~Gy~IvIvTNQ~gI~~G~~~~~~~~~ki~~iL~~lgip--fdviia~--------------~~~~~ 261 (526)
T TIGR01663 198 IFPEIPEKLKELEADGFKICIFTNQGGIARGKINADDFKAKIEAIVAKLGVP--FQVFIAI--------------GAGFY 261 (526)
T ss_pred cccCHHHHHHHHHHCCCEEEEEECCcccccCcccHHHHHHHHHHHHHHcCCc--eEEEEeC--------------CCCCC
Confidence 589999999999999999999999765 3578889999985 7766663 22334
Q ss_pred cCCCcccccCCCCchHHHHHHHHHhcC----CCCceEEEEcCCCCCcccccCCCC
Q 044617 140 LSHHGCNLCPSNLCKGFVLDHVCTSFG----CGKQRFIYLGDGRGDFCPTLKLRD 190 (265)
Q Consensus 140 ~kp~~~~~~~~~~~K~~~i~~~~~~~g----i~~~~~v~vGD~~~Di~~a~~~~~ 190 (265)
+|| ++.++..++++++ +++++++||||+..|+.+++++|.
T Consensus 262 RKP-----------~pGm~~~a~~~~~~~~~Id~~~S~~VGDaagr~~~g~~ag~ 305 (526)
T TIGR01663 262 RKP-----------LTGMWDHLKEEANDGTEIQEDDCFFVGDAAGRPANGKAAGK 305 (526)
T ss_pred CCC-----------CHHHHHHHHHhcCcccCCCHHHeEEeCCcccchHHHHhcCC
Confidence 577 8999999999985 899999999999999988765444
No 103
>TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily. The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences.
Probab=99.44 E-value=1.4e-12 Score=109.06 Aligned_cols=45 Identities=20% Similarity=0.307 Sum_probs=40.8
Q ss_pred ccccCCCCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccCCC
Q 044617 145 CNLCPSNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLR 189 (265)
Q Consensus 145 ~~~~~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~ 189 (265)
.++++.+.+|+.+++.+++.+|++++++++|||+.||+.|++.++
T Consensus 180 leI~~~~~~K~~~i~~~~~~~~~~~~~~~~~GD~~nD~~m~~~~~ 224 (256)
T TIGR00099 180 IEITAKGVSKGSALQSLAEALGISLEDVIAFGDGMNDIEMLEAAG 224 (256)
T ss_pred EEecCCCCChHHHHHHHHHHcCCCHHHEEEeCCcHHhHHHHHhCC
Confidence 366789999999999999999999999999999999999996533
No 104
>PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase). This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J ....
Probab=99.44 E-value=1.8e-13 Score=111.04 Aligned_cols=89 Identities=13% Similarity=0.197 Sum_probs=74.8
Q ss_pred CCCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCcccccceEEecCceecCCCceEEeeccccccCCCcccccC
Q 044617 70 CPLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRILPYHDSTLSHHGCNLCP 149 (265)
Q Consensus 70 ~~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp~~~~~~~ 149 (265)
.+++|++.++|+.|++.|++++++|+.....+..+.+.+|+.+. .+++. .. .||
T Consensus 126 d~~~~~~~~~l~~L~~~Gi~~~i~TGD~~~~a~~~~~~lgi~~~--~v~a~-------------~~----~kP------- 179 (215)
T PF00702_consen 126 DPLRPGAKEALQELKEAGIKVAILTGDNESTASAIAKQLGIFDS--IVFAR-------------VI----GKP------- 179 (215)
T ss_dssp EEBHTTHHHHHHHHHHTTEEEEEEESSEHHHHHHHHHHTTSCSE--EEEES-------------HE----TTT-------
T ss_pred CcchhhhhhhhhhhhccCcceeeeeccccccccccccccccccc--ccccc-------------cc----ccc-------
Confidence 36789999999999999999999999999999999999998432 24442 00 234
Q ss_pred CCCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccCC
Q 044617 150 SNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKL 188 (265)
Q Consensus 150 ~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~ 188 (265)
.+.++.++++.+++++++++||||+.||+.|+++|
T Consensus 180 ----~~k~~~~~i~~l~~~~~~v~~vGDg~nD~~al~~A 214 (215)
T PF00702_consen 180 ----EPKIFLRIIKELQVKPGEVAMVGDGVNDAPALKAA 214 (215)
T ss_dssp ----HHHHHHHHHHHHTCTGGGEEEEESSGGHHHHHHHS
T ss_pred ----cchhHHHHHHHHhcCCCEEEEEccCHHHHHHHHhC
Confidence 56788999999999999999999999999999764
No 105
>TIGR01686 FkbH FkbH-like domain. The C-terminal portion of this domain is unique to this family (by BLAST).
Probab=99.43 E-value=2.6e-13 Score=116.87 Aligned_cols=89 Identities=17% Similarity=0.233 Sum_probs=79.3
Q ss_pred CCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHh----cCcccccceEEecCceecCCCceEEeeccccccCCCccc
Q 044617 71 PLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEH----HGLLGCFSEIYTNPTYVDEQGRLRILPYHDSTLSHHGCN 146 (265)
Q Consensus 71 ~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~----~gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp~~~~ 146 (265)
.+++|+.++|+.|+++|+.++|+|++....+..++++ +++.++|+.+.++ + +|
T Consensus 31 ~~~~~~~e~L~~L~~~Gi~lai~S~n~~~~a~~~l~~~~~~~~~~~~f~~~~~~--------------~-----~p---- 87 (320)
T TIGR01686 31 PLHKTLQEKIKTLKKQGFLLALASKNDEDDAKKVFERRKDFILQAEDFDARSIN--------------W-----GP---- 87 (320)
T ss_pred ccHHHHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHhCccccCcHHHeeEEEEe--------------c-----Cc----
Confidence 4589999999999999999999999999999999999 8888888777653 1 24
Q ss_pred ccCCCCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccCCC
Q 044617 147 LCPSNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLR 189 (265)
Q Consensus 147 ~~~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~ 189 (265)
|+..+..+++++|+++++++||||+..|+.+++++.
T Consensus 88 -------k~~~i~~~~~~l~i~~~~~vfidD~~~d~~~~~~~l 123 (320)
T TIGR01686 88 -------KSESLRKIAKKLNLGTDSFLFIDDNPAERANVKITL 123 (320)
T ss_pred -------hHHHHHHHHHHhCCCcCcEEEECCCHHHHHHHHHHC
Confidence 999999999999999999999999999999987633
No 106
>PLN02645 phosphoglycolate phosphatase
Probab=99.42 E-value=3.2e-12 Score=109.72 Aligned_cols=76 Identities=13% Similarity=0.082 Sum_probs=56.4
Q ss_pred CchHHHHHHHHHhcCCCCceEEEEcCCC-CCcccccCCCCCCeeeecCCCchhhhhhcC--CCeeeEEEEeCCCHHHHHH
Q 044617 152 LCKGFVLDHVCTSFGCGKQRFIYLGDGR-GDFCPTLKLRDCDFVMPRKNYPLWDRICSN--PMLIKAKVHEWSSAEELKK 228 (265)
Q Consensus 152 ~~K~~~i~~~~~~~gi~~~~~v~vGD~~-~Di~~a~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~el~~ 228 (265)
..++.+++.+++++++++++++||||+. +|+.+|+++|...+++ .+|+.....+... ...++..+ +++.||.+
T Consensus 230 KP~p~~~~~a~~~~~~~~~~~~~VGD~~~~Di~~A~~aG~~~ilV-~~G~~~~~~~~~~~~~~~pd~~~---~~~~~l~~ 305 (311)
T PLN02645 230 KPSTFMMDYLANKFGIEKSQICMVGDRLDTDILFGQNGGCKTLLV-LSGVTSESMLLSPENKIQPDFYT---SKISDFLT 305 (311)
T ss_pred CChHHHHHHHHHHcCCCcccEEEEcCCcHHHHHHHHHcCCCEEEE-cCCCCCHHHHHhccCCCCCCEEE---CCHHHHHH
Confidence 4567899999999999999999999997 9999999988877666 4455443333221 12345556 88999887
Q ss_pred HHH
Q 044617 229 ILL 231 (265)
Q Consensus 229 ~l~ 231 (265)
+++
T Consensus 306 ~~~ 308 (311)
T PLN02645 306 LKA 308 (311)
T ss_pred Hhh
Confidence 654
No 107
>TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those.
Probab=99.42 E-value=1.5e-12 Score=108.24 Aligned_cols=51 Identities=8% Similarity=0.186 Sum_probs=42.5
Q ss_pred CCchHHHHHHHHHhcCCCCceEEEEcCCC-CCcccccCCCCCCeeeecCCCch
Q 044617 151 NLCKGFVLDHVCTSFGCGKQRFIYLGDGR-GDFCPTLKLRDCDFVMPRKNYPL 202 (265)
Q Consensus 151 ~~~K~~~i~~~~~~~gi~~~~~v~vGD~~-~Di~~a~~~~~~~~~~~~~~~~~ 202 (265)
+..++.+++.+++++++++++++||||+. +|+.+|+++|+..+++. +|...
T Consensus 177 gKP~~~~~~~~~~~~~~~~~~~~~VGD~~~~Di~~a~~~G~~~v~v~-~G~~~ 228 (249)
T TIGR01457 177 GKPNAIIMEKAVEHLGTEREETLMVGDNYLTDIRAGIDAGIDTLLVH-TGVTK 228 (249)
T ss_pred CCChHHHHHHHHHHcCCCcccEEEECCCchhhHHHHHHcCCcEEEEc-CCCCC
Confidence 44567999999999999999999999996 89999999888766664 44433
No 108
>PRK10444 UMP phosphatase; Provisional
Probab=99.41 E-value=1.5e-12 Score=107.92 Aligned_cols=72 Identities=11% Similarity=0.106 Sum_probs=53.4
Q ss_pred CCchHHHHHHHHHhcCCCCceEEEEcCCC-CCcccccCCCCCCeeeecCCCchhhhhhcCCCeeeEEEEeCCCHHHH
Q 044617 151 NLCKGFVLDHVCTSFGCGKQRFIYLGDGR-GDFCPTLKLRDCDFVMPRKNYPLWDRICSNPMLIKAKVHEWSSAEEL 226 (265)
Q Consensus 151 ~~~K~~~i~~~~~~~gi~~~~~v~vGD~~-~Di~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el 226 (265)
+..++.+++.+++++++++++++||||+. +|+.+|+++|...+.+ .+|......+......++..+ +++.||
T Consensus 173 gKP~~~~~~~~~~~~~~~~~~~v~IGD~~~tDi~~A~~~G~~~vlV-~~G~~~~~~l~~~~~~pd~~~---~sl~el 245 (248)
T PRK10444 173 GKPSPWIIRAALNKMQAHSEETVIVGDNLRTDILAGFQAGLETILV-LSGVSTLDDIDSMPFRPSWIY---PSVADI 245 (248)
T ss_pred CCCCHHHHHHHHHHcCCCcccEEEECCCcHHHHHHHHHcCCCEEEE-CCCCCCHHHHhcCCCCCCEEE---CCHHHh
Confidence 45577999999999999999999999996 8999999988876666 455444443432222345556 777776
No 109
>PRK10187 trehalose-6-phosphate phosphatase; Provisional
Probab=99.39 E-value=2.1e-11 Score=102.35 Aligned_cols=98 Identities=12% Similarity=0.060 Sum_probs=65.9
Q ss_pred cccCCCCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccCCC-CCCeeeecCCCchhhhhhcCCCeeeEEEEeCCCHH
Q 044617 146 NLCPSNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLR-DCDFVMPRKNYPLWDRICSNPMLIKAKVHEWSSAE 224 (265)
Q Consensus 146 ~~~~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (265)
++.+.+.+|+.+++++++.+|+..+++++|||+.||+.|.+.+. ..++.++-+. ....+...+ +++.
T Consensus 167 Ei~p~g~~Kg~al~~ll~~~~~~~~~v~~~GD~~nD~~mf~~~~~~~g~~vavg~---------a~~~A~~~l---~~~~ 234 (266)
T PRK10187 167 EIKPRGTNKGEAIAAFMQEAPFAGRTPVFVGDDLTDEAGFAVVNRLGGISVKVGT---------GATQASWRL---AGVP 234 (266)
T ss_pred EeeCCCCCHHHHHHHHHHhcCCCCCeEEEEcCCccHHHHHHHHHhcCCeEEEECC---------CCCcCeEeC---CCHH
Confidence 45588999999999999999999999999999999999875431 1133333221 111222333 8999
Q ss_pred HHHHHHHHHHHhhccccccccccccCCCcccccc
Q 044617 225 ELKKILLHLIGAISIKEDVDSTVSSQPNSSECRS 258 (265)
Q Consensus 225 el~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (265)
++..+|..+.....-...| -.-+---++||+
T Consensus 235 ~v~~~L~~l~~~~~~~~~~---~~~~~~~~~~~~ 265 (266)
T PRK10187 235 DVWSWLEMITTAQQQKREN---NRRDDYESFSRS 265 (266)
T ss_pred HHHHHHHHHHHhhhccccC---CCCCCccccccc
Confidence 9999999988655521011 123444567775
No 110
>PRK08238 hypothetical protein; Validated
Probab=99.37 E-value=5.2e-12 Score=113.59 Aligned_cols=96 Identities=20% Similarity=0.357 Sum_probs=71.7
Q ss_pred CCCCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCcccccceEEecCceecCCCceEEeeccccccCCCccccc
Q 044617 69 QCPLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRILPYHDSTLSHHGCNLC 148 (265)
Q Consensus 69 ~~~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp~~~~~~ 148 (265)
..+++||+.+++++++++|++++|+|++....++.+++++|+ |+.+++.+... ..||
T Consensus 70 ~lp~~pga~e~L~~lk~~G~~v~LaTas~~~~a~~i~~~lGl---Fd~Vigsd~~~--------------~~kg------ 126 (479)
T PRK08238 70 TLPYNEEVLDYLRAERAAGRKLVLATASDERLAQAVAAHLGL---FDGVFASDGTT--------------NLKG------ 126 (479)
T ss_pred hCCCChhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCC---CCEEEeCCCcc--------------ccCC------
Confidence 346789999999999999999999999999999999999998 78888863111 0111
Q ss_pred CCCCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccCCCCCCeeee
Q 044617 149 PSNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRDCDFVMP 196 (265)
Q Consensus 149 ~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~~~~~~~ 196 (265)
..|+..+. +.++ .++++|+||+.+|+.+++.++ ..+++.
T Consensus 127 ---~~K~~~l~---~~l~--~~~~~yvGDS~~Dlp~~~~A~-~av~Vn 165 (479)
T PRK08238 127 ---AAKAAALV---EAFG--ERGFDYAGNSAADLPVWAAAR-RAIVVG 165 (479)
T ss_pred ---chHHHHHH---HHhC--ccCeeEecCCHHHHHHHHhCC-CeEEEC
Confidence 22665554 3333 356899999999999997655 334444
No 111
>PTZ00174 phosphomannomutase; Provisional
Probab=99.36 E-value=1.5e-11 Score=102.15 Aligned_cols=50 Identities=18% Similarity=0.314 Sum_probs=42.7
Q ss_pred cccccCCCCchHHHHHHHHHhcCCCCceEEEEcC----CCCCcccccCCCCCCeeeec
Q 044617 144 GCNLCPSNLCKGFVLDHVCTSFGCGKQRFIYLGD----GRGDFCPTLKLRDCDFVMPR 197 (265)
Q Consensus 144 ~~~~~~~~~~K~~~i~~~~~~~gi~~~~~v~vGD----~~~Di~~a~~~~~~~~~~~~ 197 (265)
++++.+.|++|+.+++.+++. ++++++||| +.||++|.+.++.+++.+++
T Consensus 179 ~leI~~~gvsKg~al~~L~~~----~~eviafGD~~~~~~NDieMl~~~~~~g~~v~n 232 (247)
T PTZ00174 179 SFDVFPKGWDKTYCLRHLEND----FKEIHFFGDKTFEGGNDYEIYNDPRTIGHSVKN 232 (247)
T ss_pred EEEeeeCCCcHHHHHHHHHhh----hhhEEEEcccCCCCCCcHhhhhcCCCceEEeCC
Confidence 447788999999999999998 589999999 89999999766666677763
No 112
>TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.
Probab=99.35 E-value=4.7e-12 Score=105.42 Aligned_cols=53 Identities=13% Similarity=0.114 Sum_probs=45.3
Q ss_pred cccCCCCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccCCCCCCeeeecC
Q 044617 146 NLCPSNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRDCDFVMPRK 198 (265)
Q Consensus 146 ~~~~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~~~~~~~~~ 198 (265)
++++.+.+|+.+++.+++.+|++++++++|||+.||+.|++.++..++++.+.
T Consensus 160 di~~~~~~K~~al~~l~~~~~i~~~~~i~~GD~~ND~~ml~~~~~~~va~~na 212 (249)
T TIGR01485 160 DILPQGSGKGQALQYLLQKLAMEPSQTLVCGDSGNDIELFEIGSVRGVIVSNA 212 (249)
T ss_pred EEEeCCCChHHHHHHHHHHcCCCccCEEEEECChhHHHHHHccCCcEEEECCC
Confidence 56788999999999999999999999999999999999996544455666543
No 113
>TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family. This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta
Probab=99.33 E-value=2.9e-11 Score=101.08 Aligned_cols=50 Identities=14% Similarity=0.094 Sum_probs=43.0
Q ss_pred cccCCCCchHHHHHHHHHhcCCC--CceEEEEcCCCCCcccccCCCCCCeeeecC
Q 044617 146 NLCPSNLCKGFVLDHVCTSFGCG--KQRFIYLGDGRGDFCPTLKLRDCDFVMPRK 198 (265)
Q Consensus 146 ~~~~~~~~K~~~i~~~~~~~gi~--~~~~v~vGD~~~Di~~a~~~~~~~~~~~~~ 198 (265)
++.+.+.+|+.+++++++.+|++ .+++++|||+.||+.|.+ .+++.++-.
T Consensus 169 ei~~~~~~Kg~ai~~l~~~~~i~~~~~~~~a~GD~~ND~~Ml~---~ag~~vam~ 220 (256)
T TIGR01486 169 HVLGAGSDKGKAANALKQFYNQPGGAIKVVGLGDSPNDLPLLE---VVDLAVVVP 220 (256)
T ss_pred EEecCCCCHHHHHHHHHHHHhhcCCCceEEEEcCCHhhHHHHH---HCCEEEEeC
Confidence 45688999999999999999999 999999999999999994 455555543
No 114
>TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB. The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear.
Probab=99.32 E-value=1e-11 Score=100.24 Aligned_cols=43 Identities=16% Similarity=0.203 Sum_probs=39.7
Q ss_pred ccccCCCCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccC
Q 044617 145 CNLCPSNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLK 187 (265)
Q Consensus 145 ~~~~~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~ 187 (265)
+++.|.+.+|+.+++.++++++++++++++|||+.||+.+++.
T Consensus 155 ~ev~p~~~~K~~~~~~~~~~~~~~~~~~~~~GD~~nD~~~~~~ 197 (204)
T TIGR01484 155 LEVLPAGVDKGSALQALLKELNGKRDEILAFGDSGNDEEMFEV 197 (204)
T ss_pred EEEecCCCChHHHHHHHHHHhCCCHHHEEEEcCCHHHHHHHHH
Confidence 4667999999999999999999999999999999999999954
No 115
>COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only]
Probab=99.31 E-value=9e-13 Score=98.01 Aligned_cols=84 Identities=15% Similarity=0.183 Sum_probs=69.4
Q ss_pred CCCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCcccccceEEecCceecCCCceEEeeccccccCCCcccccC
Q 044617 70 CPLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRILPYHDSTLSHHGCNLCP 149 (265)
Q Consensus 70 ~~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp~~~~~~~ 149 (265)
.....|. -|+.|.+.|++++|+|+.....++...+.+|+...+..+ .
T Consensus 36 Fnv~DG~--Gik~l~~~Gi~vAIITGr~s~ive~Ra~~LGI~~~~qG~------------------~------------- 82 (170)
T COG1778 36 FNVRDGH--GIKLLLKSGIKVAIITGRDSPIVEKRAKDLGIKHLYQGI------------------S------------- 82 (170)
T ss_pred eeccCcH--HHHHHHHcCCeEEEEeCCCCHHHHHHHHHcCCceeeech------------------H-------------
Confidence 3445554 567778889999999999999999999999987543321 1
Q ss_pred CCCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccCCC
Q 044617 150 SNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLR 189 (265)
Q Consensus 150 ~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~ 189 (265)
.|-.+++.+++++++.++++.|+||-.+|+.++++.|
T Consensus 83 ---dK~~a~~~L~~~~~l~~e~~ayiGDD~~Dlpvm~~vG 119 (170)
T COG1778 83 ---DKLAAFEELLKKLNLDPEEVAYVGDDLVDLPVMEKVG 119 (170)
T ss_pred ---hHHHHHHHHHHHhCCCHHHhhhhcCccccHHHHHHcC
Confidence 2899999999999999999999999999999996533
No 116
>TIGR01684 viral_ppase viral phosphatase. These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade.
Probab=99.30 E-value=2.8e-11 Score=100.39 Aligned_cols=131 Identities=21% Similarity=0.164 Sum_probs=90.3
Q ss_pred ceEEEEecCCCCCCCCchHHHHHHhCchHHHHHHHccCChhHHHHHHHHHHHhCCCCHHHHHHHhcCCCCC-hhHHHHHH
Q 044617 3 DVVVVFDFDRTLIDDDSDNWVVTQMGLTHLFNQLRSTLPWNSLMDRMMKELHSQGKTVEDIANCLRQCPLD-SHVAAAIK 81 (265)
Q Consensus 3 ~k~iifD~DGTL~ds~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~e~l~ 81 (265)
+++|+||+||||++.+. .+.+. ||+.++|+
T Consensus 126 ~kvIvFDLDgTLi~~~~-------------------------------------------------~v~irdPgV~EaL~ 156 (301)
T TIGR01684 126 PHVVVFDLDSTLITDEE-------------------------------------------------PVRIRDPRIYDSLT 156 (301)
T ss_pred ceEEEEecCCCCcCCCC-------------------------------------------------ccccCCHHHHHHHH
Confidence 58999999999999832 34455 99999999
Q ss_pred HHHHcCCcEEEEeCCCHHHHHHHHHhcCcccccceEEecCceecCCCceE-Ee--eccccccCCCcccc-cCCCCch-HH
Q 044617 82 SAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLR-IL--PYHDSTLSHHGCNL-CPSNLCK-GF 156 (265)
Q Consensus 82 ~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~-~~--~~~~~~~kp~~~~~-~~~~~~K-~~ 156 (265)
+|+++|++++|+|++....+...++.+|+..+|+.+++++.........+ .. ....-..+|+-.+. ...+..| |.
T Consensus 157 ~LkekGikLaIaTS~~Re~v~~~L~~lGLd~YFdvIIs~Gdv~~~kp~~e~~d~~~~~~~~~~~f~~d~~~~~~lPKSpr 236 (301)
T TIGR01684 157 ELKKRGCILVLWSYGDRDHVVESMRKVKLDRYFDIIISGGHKAEEYSTMSTEDRQYRYVFTKTPFYLNTTDGKRLPKSPR 236 (301)
T ss_pred HHHHCCCEEEEEECCCHHHHHHHHHHcCCCcccCEEEECCccccCCCCccccccccceEEecCCeEEeCCCCCcCCCCCe
Confidence 99999999999999999999999999999999999988754332110100 00 00000112222221 1113334 68
Q ss_pred HHHHHHHhcCCCCce-EEEEcCCC-CCc
Q 044617 157 VLDHVCTSFGCGKQR-FIYLGDGR-GDF 182 (265)
Q Consensus 157 ~i~~~~~~~gi~~~~-~v~vGD~~-~Di 182 (265)
++...+++.|+..-. +..|.|=. ||+
T Consensus 237 vvl~yL~~~gvn~~KtitLVDDl~~Nn~ 264 (301)
T TIGR01684 237 VVLWYLYDLGVNYFKSITLVDDLADNNF 264 (301)
T ss_pred ehHHHHHHcCCceeeeEEEeccCcccCc
Confidence 999999999988644 45777753 555
No 117
>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)
Probab=99.29 E-value=2.2e-11 Score=100.91 Aligned_cols=85 Identities=11% Similarity=0.033 Sum_probs=69.7
Q ss_pred CCChhHHHHHHHHHHcCCcEEEEeCCCHHHHH--HHHHhcCccc-ccceEEecCceecCCCceEEeeccccccCCCcccc
Q 044617 71 PLDSHVAAAIKSAHSLGCDLKIVSDANQFYIE--TIMEHHGLLG-CFSEIYTNPTYVDEQGRLRILPYHDSTLSHHGCNL 147 (265)
Q Consensus 71 ~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~--~~l~~~gl~~-~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp~~~~~ 147 (265)
.++||+.++|++|+++|++++++||+...... ..++++|+.. +|+.|+++. ..
T Consensus 24 ~~~pga~e~L~~L~~~G~~~~ivTN~~~~~~~~~~~L~~~gl~~~~~~~Ii~s~-------------~~----------- 79 (242)
T TIGR01459 24 HTYPGAVQNLNKIIAQGKPVYFVSNSPRNIFSLHKTLKSLGINADLPEMIISSG-------------EI----------- 79 (242)
T ss_pred ccCccHHHHHHHHHHCCCEEEEEeCCCCChHHHHHHHHHCCCCccccceEEccH-------------HH-----------
Confidence 46899999999999999999999998877655 7789999987 888888851 00
Q ss_pred cCCCCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccc
Q 044617 148 CPSNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPT 185 (265)
Q Consensus 148 ~~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a 185 (265)
....+.+++++++++++++++|||+..|+...
T Consensus 80 ------~~~~l~~~~~~~~~~~~~~~~vGd~~~d~~~~ 111 (242)
T TIGR01459 80 ------AVQMILESKKRFDIRNGIIYLLGHLENDIINL 111 (242)
T ss_pred ------HHHHHHhhhhhccCCCceEEEeCCcccchhhh
Confidence 23456667778888889999999999998766
No 118
>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family. This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.
Probab=99.28 E-value=8.1e-13 Score=111.78 Aligned_cols=110 Identities=13% Similarity=0.142 Sum_probs=74.4
Q ss_pred ChhHHHHHHHHHHcCCcEEEEeCCCHHHHH-HHHHhcCcccccceEEecCceecCCCceEEeeccccccCCCcccccCCC
Q 044617 73 DSHVAAAIKSAHSLGCDLKIVSDANQFYIE-TIMEHHGLLGCFSEIYTNPTYVDEQGRLRILPYHDSTLSHHGCNLCPSN 151 (265)
Q Consensus 73 ~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~-~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp~~~~~~~~~ 151 (265)
++++.++++.|+++|. ++|+||....+.. ..+...++..+|+.+... . +. ......||
T Consensus 145 y~~i~~~l~~L~~~g~-~~i~Tn~d~~~~~~~~~~~~~~g~~~~~i~~~----~--g~-----~~~~~gKP--------- 203 (279)
T TIGR01452 145 YAKLREACAHLREPGC-LFVATNRDPWHPLSDGSRTPGTGSLVAAIETA----S--GR-----QPLVVGKP--------- 203 (279)
T ss_pred HHHHHHHHHHHhcCCC-EEEEeCCCCCCCCcCCCcccChHHHHHHHHHH----h--CC-----ceeccCCC---------
Confidence 7789999999998886 7889998764321 112233444444433321 0 00 11113456
Q ss_pred CchHHHHHHHHHhcCCCCceEEEEcCC-CCCcccccCCCCCCeeeecCCCchhhhh
Q 044617 152 LCKGFVLDHVCTSFGCGKQRFIYLGDG-RGDFCPTLKLRDCDFVMPRKNYPLWDRI 206 (265)
Q Consensus 152 ~~K~~~i~~~~~~~gi~~~~~v~vGD~-~~Di~~a~~~~~~~~~~~~~~~~~~~~~ 206 (265)
++..+..+++++|+++++++||||+ .+|+.+|+++|...+.+ .+|+...+.+
T Consensus 204 --~p~~~~~~~~~~~~~~~~~lmIGD~~~tDI~~A~~aGi~si~V-~~G~~~~~~l 256 (279)
T TIGR01452 204 --SPYMFECITENFSIDPARTLMVGDRLETDILFGHRCGMTTVLV-LSGVSRLEEA 256 (279)
T ss_pred --CHHHHHHHHHHhCCChhhEEEECCChHHHHHHHHHcCCcEEEE-CCCCCCHHHH
Confidence 7899999999999999999999999 59999999988765555 5665544433
No 119
>PHA03398 viral phosphatase superfamily protein; Provisional
Probab=99.26 E-value=6.1e-11 Score=98.52 Aligned_cols=131 Identities=21% Similarity=0.240 Sum_probs=91.1
Q ss_pred ceEEEEecCCCCCCCCchHHHHHHhCchHHHHHHHccCChhHHHHHHHHHHHhCCCCHHHHHHHhcCCCCC-hhHHHHHH
Q 044617 3 DVVVVFDFDRTLIDDDSDNWVVTQMGLTHLFNQLRSTLPWNSLMDRMMKELHSQGKTVEDIANCLRQCPLD-SHVAAAIK 81 (265)
Q Consensus 3 ~k~iifD~DGTL~ds~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~e~l~ 81 (265)
+++|+||+||||++++. .+.+. |++.++|+
T Consensus 128 ~~~i~~D~D~TL~~~~~-------------------------------------------------~v~irdp~V~EtL~ 158 (303)
T PHA03398 128 PHVIVFDLDSTLITDEE-------------------------------------------------PVRIRDPFVYDSLD 158 (303)
T ss_pred ccEEEEecCCCccCCCC-------------------------------------------------ccccCChhHHHHHH
Confidence 58999999999999843 34454 99999999
Q ss_pred HHHHcCCcEEEEeCCCHHHHHHHHHhcCcccccceEEecCceecCCC-ceEEee-c-cccccCCCcccccCC-CCch-HH
Q 044617 82 SAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTNPTYVDEQG-RLRILP-Y-HDSTLSHHGCNLCPS-NLCK-GF 156 (265)
Q Consensus 82 ~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~-~~~~~~-~-~~~~~kp~~~~~~~~-~~~K-~~ 156 (265)
+|+++|++++|+||+....+...++.+|+..+|+.+++++....... +.+... + ..-..+|+-.+.-+. +..| |.
T Consensus 159 eLkekGikLaIvTNg~Re~v~~~Le~lgL~~yFDvII~~g~i~~k~~~~~~~d~~~~~~~~~~~f~~d~~~~~~lPKSpr 238 (303)
T PHA03398 159 ELKERGCVLVLWSYGNREHVVHSLKETKLEGYFDIIICGGRKAGEYSRRVIVDNKYKMVFVKKPFYLDVTDVKNLPKSPR 238 (303)
T ss_pred HHHHCCCEEEEEcCCChHHHHHHHHHcCCCccccEEEECCCcccccccceeecccceeEEecCceeEeCCcccCCCCCCe
Confidence 99999999999999999999999999999999998888765433221 111000 0 000112322221111 3334 68
Q ss_pred HHHHHHHhcCCCC-ceEEEEcCCC-CCc
Q 044617 157 VLDHVCTSFGCGK-QRFIYLGDGR-GDF 182 (265)
Q Consensus 157 ~i~~~~~~~gi~~-~~~v~vGD~~-~Di 182 (265)
++...+++.|+.. .-+..|.|=. ||+
T Consensus 239 vVl~yL~~~gvn~~KtiTLVDDl~~Nn~ 266 (303)
T PHA03398 239 VVLWYLRKKGVNYFKTITLVDDLKSNNY 266 (303)
T ss_pred ehHHHHHHcCcceeccEEEeccCcccCc
Confidence 9999999999886 4455777763 555
No 120
>COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism]
Probab=99.25 E-value=3e-11 Score=100.15 Aligned_cols=78 Identities=13% Similarity=0.042 Sum_probs=54.7
Q ss_pred CCchHHHHHHHHHhcCCCCceEEEEcCCC-CCcccccCCCCCCeeeecCCCchhhhhhcCCCeeeEEEEeCCCHHHHHHH
Q 044617 151 NLCKGFVLDHVCTSFGCGKQRFIYLGDGR-GDFCPTLKLRDCDFVMPRKNYPLWDRICSNPMLIKAKVHEWSSAEELKKI 229 (265)
Q Consensus 151 ~~~K~~~i~~~~~~~gi~~~~~v~vGD~~-~Di~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~ 229 (265)
|...+.+++.+++.++..+++++||||+. +|+.+|+++|+.++.+..+-+...+ +...+..++..+ ++..++...
T Consensus 189 GKP~~~i~~~al~~~~~~~~~~~mVGD~~~TDI~~a~~~G~~t~LV~TGv~~~~~-~~~~~~~p~~v~---~sl~~~~~~ 264 (269)
T COG0647 189 GKPSPAIYEAALEKLGLDRSEVLMVGDRLDTDILGAKAAGLDTLLVLTGVSSAED-LDRAEVKPTYVV---DSLAELITA 264 (269)
T ss_pred CCCCHHHHHHHHHHhCCCcccEEEEcCCchhhHHHHHHcCCCEEEEccCCCChhh-hhhhccCCcchH---hhHHHHHhh
Confidence 33356899999999999999999999995 9999999989887777665443433 332222233333 666666655
Q ss_pred HHH
Q 044617 230 LLH 232 (265)
Q Consensus 230 l~~ 232 (265)
+..
T Consensus 265 ~~~ 267 (269)
T COG0647 265 LKE 267 (269)
T ss_pred hhc
Confidence 543
No 121
>TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial. Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472.
Probab=99.20 E-value=1.8e-10 Score=95.13 Aligned_cols=42 Identities=19% Similarity=0.256 Sum_probs=39.0
Q ss_pred cccCCCCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccC
Q 044617 146 NLCPSNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLK 187 (265)
Q Consensus 146 ~~~~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~ 187 (265)
++.+.+.+|+.+++.+++++|++++++++|||+.||+.|++.
T Consensus 152 ei~~~~~~K~~al~~l~~~~g~~~~~~i~~GD~~nD~~ml~~ 193 (236)
T TIGR02471 152 DVLPLRASKGLALRYLSYRWGLPLEQILVAGDSGNDEEMLRG 193 (236)
T ss_pred EEeeCCCChHHHHHHHHHHhCCCHHHEEEEcCCccHHHHHcC
Confidence 567889999999999999999999999999999999999954
No 122
>TIGR02251 HIF-SF_euk Dullard-like phosphatase domain. This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031.
Probab=99.20 E-value=1.1e-10 Score=90.71 Aligned_cols=90 Identities=12% Similarity=0.104 Sum_probs=69.7
Q ss_pred CCCCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCccc-ccceEEecCceecCCCceEEeeccccccCCCcccc
Q 044617 69 QCPLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLG-CFSEIYTNPTYVDEQGRLRILPYHDSTLSHHGCNL 147 (265)
Q Consensus 69 ~~~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~-~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp~~~~~ 147 (265)
.....||+.++|++|++. ++++|.|++...+++.+++.++... +|..+++.+.... .
T Consensus 40 ~v~~RPgl~eFL~~l~~~-yei~I~Ts~~~~yA~~il~~ldp~~~~f~~~l~r~~~~~--------------~------- 97 (162)
T TIGR02251 40 YVFKRPHVDEFLERVSKW-YELVIFTASLEEYADPVLDILDRGGKVISRRLYRESCVF--------------T------- 97 (162)
T ss_pred EEEECCCHHHHHHHHHhc-CEEEEEcCCcHHHHHHHHHHHCcCCCEEeEEEEccccEE--------------e-------
Confidence 356789999999999987 9999999999999999999999765 7777766421110 0
Q ss_pred cCCCCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccC
Q 044617 148 CPSNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLK 187 (265)
Q Consensus 148 ~~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~ 187 (265)
++. +.+.++.+|.+++++++|||++.|+.++.+
T Consensus 98 ------~~~-~~K~L~~l~~~~~~vIiVDD~~~~~~~~~~ 130 (162)
T TIGR02251 98 ------NGK-YVKDLSLVGKDLSKVIIIDNSPYSYSLQPD 130 (162)
T ss_pred ------CCC-EEeEchhcCCChhhEEEEeCChhhhccCcc
Confidence 111 334466678889999999999999988743
No 123
>TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family. which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles.
Probab=99.18 E-value=2.7e-10 Score=94.71 Aligned_cols=85 Identities=16% Similarity=0.103 Sum_probs=64.1
Q ss_pred CCCCChhHHHHHHHHHHcCCcEEEEeCCCHH---HHHHHHHhcCccccc-ceEEecCceecCCCceEEeeccccccCCCc
Q 044617 69 QCPLDSHVAAAIKSAHSLGCDLKIVSDANQF---YIETIMEHHGLLGCF-SEIYTNPTYVDEQGRLRILPYHDSTLSHHG 144 (265)
Q Consensus 69 ~~~~~~g~~e~l~~l~~~g~~~~ivS~~~~~---~i~~~l~~~gl~~~f-~~i~~~~~~~d~~~~~~~~~~~~~~~kp~~ 144 (265)
...++||+.++|+.|+++|++++++||+... .+...++.+|+..++ +.++..+ . .+
T Consensus 116 ~a~~ipGA~e~L~~L~~~G~~v~iVTnR~~~~~~~T~~~Lkk~Gi~~~~~d~lllr~-------------~----~~--- 175 (266)
T TIGR01533 116 QAKPVAGALDFLNYANSKGVKIFYVSNRSEKEKAATLKNLKRFGFPQADEEHLLLKK-------------D----KS--- 175 (266)
T ss_pred CCCcCccHHHHHHHHHHCCCeEEEEeCCCcchHHHHHHHHHHcCcCCCCcceEEeCC-------------C----CC---
Confidence 5678999999999999999999999998744 345677888986543 3344320 0 01
Q ss_pred ccccCCCCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccc
Q 044617 145 CNLCPSNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPT 185 (265)
Q Consensus 145 ~~~~~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a 185 (265)
.|+...+.+.+.++| +++|||..+|+...
T Consensus 176 --------~K~~rr~~I~~~y~I----vl~vGD~~~Df~~~ 204 (266)
T TIGR01533 176 --------SKESRRQKVQKDYEI----VLLFGDNLLDFDDF 204 (266)
T ss_pred --------CcHHHHHHHHhcCCE----EEEECCCHHHhhhh
Confidence 278888888887766 89999999999654
No 124
>TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase. Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles.
Probab=99.18 E-value=1.3e-10 Score=95.13 Aligned_cols=40 Identities=20% Similarity=0.185 Sum_probs=35.9
Q ss_pred ChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCccc
Q 044617 73 DSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLG 112 (265)
Q Consensus 73 ~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~ 112 (265)
.+++.+.|++|+++|++++++|++....+...++.+|+..
T Consensus 17 ~~~~~~ai~~l~~~G~~~vi~TgR~~~~~~~~~~~lg~~~ 56 (225)
T TIGR02461 17 PGPAREALEELKDLGFPIVFVSSKTRAEQEYYREELGVEP 56 (225)
T ss_pred chHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCC
Confidence 4678999999999999999999999999999999999754
No 125
>PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=99.15 E-value=7.2e-10 Score=92.28 Aligned_cols=43 Identities=12% Similarity=-0.018 Sum_probs=37.3
Q ss_pred CCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCcccc
Q 044617 71 PLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGC 113 (265)
Q Consensus 71 ~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~ 113 (265)
...+.+.+.|++|+++|++++++|++....+..+.+.+++..+
T Consensus 18 ~~~~~a~~aL~~Lk~~GI~vVlaTGRt~~ev~~l~~~Lgl~~p 60 (302)
T PRK12702 18 NSYGAARQALAALERRSIPLVLYSLRTRAQLEHLCRQLRLEHP 60 (302)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHhCCCCe
Confidence 3567788999999999999999999999999999999988654
No 126
>PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional
Probab=99.13 E-value=7e-10 Score=101.94 Aligned_cols=38 Identities=16% Similarity=0.142 Sum_probs=35.0
Q ss_pred CCCchHHHHHHHHHhcCCCCceEEEE--cCCCCCcccccC
Q 044617 150 SNLCKGFVLDHVCTSFGCGKQRFIYL--GDGRGDFCPTLK 187 (265)
Q Consensus 150 ~~~~K~~~i~~~~~~~gi~~~~~v~v--GD~~~Di~~a~~ 187 (265)
.+.+|+.+++.+++.++++.+++++| ||+.||+.|.+.
T Consensus 610 ~gvdKG~AL~~L~e~~gI~~~eViafalGDs~NDisMLe~ 649 (694)
T PRK14502 610 GGNDKGKAIKILNELFRLNFGNIHTFGLGDSENDYSMLET 649 (694)
T ss_pred CCCCHHHHHHHHHHHhCCCccceEEEEcCCcHhhHHHHHh
Confidence 58999999999999999998999988 999999999944
No 127
>PF12689 Acid_PPase: Acid Phosphatase; InterPro: IPR010036 This entry represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterised as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues [, ].; GO: 0016791 phosphatase activity; PDB: 1U7P_A 1U7O_A 2WM8_A.
Probab=99.13 E-value=4.8e-11 Score=92.33 Aligned_cols=102 Identities=13% Similarity=0.126 Sum_probs=61.9
Q ss_pred CCCCChhHHHHHHHHHHcCCcEEEEe-CCCHHHHHHHHHhcCcccccceEEecCceecCCCceEEeeccccccCCCcccc
Q 044617 69 QCPLDSHVAAAIKSAHSLGCDLKIVS-DANQFYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRILPYHDSTLSHHGCNL 147 (265)
Q Consensus 69 ~~~~~~g~~e~l~~l~~~g~~~~ivS-~~~~~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp~~~~~ 147 (265)
.+.++|++.++|+.|+++|++++++| +.....++..|+.+++............+++ ..+ .. |
T Consensus 43 ~v~lypdv~~iL~~L~~~gv~lavASRt~~P~~A~~~L~~l~i~~~~~~~~~~~~~F~---~~e---I~-----~----- 106 (169)
T PF12689_consen 43 EVSLYPDVPEILQELKERGVKLAVASRTDEPDWARELLKLLEIDDADGDGVPLIEYFD---YLE---IY-----P----- 106 (169)
T ss_dssp EE---TTHHHHHHHHHHCT--EEEEE--S-HHHHHHHHHHTT-C----------CCEC---EEE---ES-----S-----
T ss_pred EEEeCcCHHHHHHHHHHCCCEEEEEECCCChHHHHHHHHhcCCCccccccccchhhcc---hhh---ee-----c-----
Confidence 57899999999999999999999999 4567799999999998722111222111111 011 11 1
Q ss_pred cCCCCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccCCCC
Q 044617 148 CPSNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRD 190 (265)
Q Consensus 148 ~~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~ 190 (265)
.+|..-++.+.++.|++++++++|.|....+....++|.
T Consensus 107 ----gsK~~Hf~~i~~~tgI~y~eMlFFDDe~~N~~~v~~lGV 145 (169)
T PF12689_consen 107 ----GSKTTHFRRIHRKTGIPYEEMLFFDDESRNIEVVSKLGV 145 (169)
T ss_dssp ----S-HHHHHHHHHHHH---GGGEEEEES-HHHHHHHHTTT-
T ss_pred ----CchHHHHHHHHHhcCCChhHEEEecCchhcceeeEecCc
Confidence 249999999999999999999999999877766655454
No 128
>PF08645 PNK3P: Polynucleotide kinase 3 phosphatase; InterPro: IPR013954 Polynucleotide kinase 3 phosphatases play a role in the repair of single breaks in DNA induced by DNA-damaging agents such as gamma radiation and camptothecin []. ; PDB: 2FPW_A 2FPR_A 2FPX_A 2FPS_A 2FPU_B 3ZVM_A 1YJ5_A 3ZVL_A 3U7E_B 3U7G_A ....
Probab=99.05 E-value=1.4e-10 Score=89.51 Aligned_cols=83 Identities=20% Similarity=0.389 Sum_probs=59.1
Q ss_pred CChhHHHHHHHHHHcCCcEEEEeCC----C----------HHHHHHHHHhcCcccccceEEecCceecCCCceEEeeccc
Q 044617 72 LDSHVAAAIKSAHSLGCDLKIVSDA----N----------QFYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRILPYHD 137 (265)
Q Consensus 72 ~~~g~~e~l~~l~~~g~~~~ivS~~----~----------~~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~~~~~ 137 (265)
+.+++.+.|+.|++.||.++|+||- . ...+..+++.+++. + .++.+ +...
T Consensus 30 ~~~~v~~~L~~l~~~Gy~IvIvTNQ~gi~~~~~~~~~~~~~~ki~~il~~l~ip--~-~~~~a-------------~~~d 93 (159)
T PF08645_consen 30 FPPGVPEALRELHKKGYKIVIVTNQSGIGRGMGEKDLENFHEKIENILKELGIP--I-QVYAA-------------PHKD 93 (159)
T ss_dssp C-TTHHHHHHHHHHTTEEEEEEEE-CCCCCTBTCCHHHHHHHHHHHHHHHCTS---E-EEEEC-------------GCSS
T ss_pred cchhHHHHHHHHHhcCCeEEEEeCccccccccccchHHHHHHHHHHHHHHcCCc--e-EEEec-------------CCCC
Confidence 4568999999999999999999984 1 12355666777765 2 33433 2334
Q ss_pred cccCCCcccccCCCCchHHHHHHHHHhcC----CCCceEEEEcCCCCC
Q 044617 138 STLSHHGCNLCPSNLCKGFVLDHVCTSFG----CGKQRFIYLGDGRGD 181 (265)
Q Consensus 138 ~~~kp~~~~~~~~~~~K~~~i~~~~~~~g----i~~~~~v~vGD~~~D 181 (265)
..+|| ++.+++.+++.++ ++.++++||||+..+
T Consensus 94 ~~RKP-----------~~GM~~~~~~~~~~~~~id~~~Sf~VGDaagr 130 (159)
T PF08645_consen 94 PCRKP-----------NPGMWEFALKDYNDGVEIDLANSFYVGDAAGR 130 (159)
T ss_dssp TTSTT-----------SSHHHHHHCCCTSTT--S-CCC-EEEESSCHC
T ss_pred CCCCC-----------chhHHHHHHHhccccccccccceEEEeccCCC
Confidence 56788 7899999999987 588999999998665
No 129
>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458. This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.
Probab=99.04 E-value=1.4e-10 Score=96.84 Aligned_cols=132 Identities=9% Similarity=-0.012 Sum_probs=93.0
Q ss_pred ChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCcccccceEEecCceecCCCceEEeeccccccCCCcccccCCCC
Q 044617 73 DSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRILPYHDSTLSHHGCNLCPSNL 152 (265)
Q Consensus 73 ~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp~~~~~~~~~~ 152 (265)
++++.+.+..|++.+++++++||....+.......+|+..+|+.+.+.. +. ......||
T Consensus 122 y~~l~~a~~~L~~~~~~~~iatn~~~~~~~~~~~~~g~g~~~~~i~~~~------~~-----~~~~~gKP---------- 180 (257)
T TIGR01458 122 YQILNQAFRLLLDGAKPLLIAIGKGRYYKRKDGLALDVGPFVTALEYAT------DT-----KATVVGKP---------- 180 (257)
T ss_pred HHHHHHHHHHHHcCCCCEEEEeCCCCCCcCCCCCCCCchHHHHHHHHHh------CC-----CceeecCC----------
Confidence 6788888999999889999999988776665556667766666554420 10 01112466
Q ss_pred chHHHHHHHHHhcCCCCceEEEEcCCC-CCcccccCCCCCCeeeecCCCchhhhhhcCCCeeeEEEEeCCCHHHHHHHH
Q 044617 153 CKGFVLDHVCTSFGCGKQRFIYLGDGR-GDFCPTLKLRDCDFVMPRKNYPLWDRICSNPMLIKAKVHEWSSAEELKKIL 230 (265)
Q Consensus 153 ~K~~~i~~~~~~~gi~~~~~v~vGD~~-~Di~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~l 230 (265)
++.+++.+++++++++++++||||+. +|+.+|+++|...+++..+.+...+ .......++..+ +++.||.++|
T Consensus 181 -~p~~~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~~G~~~i~v~~G~~~~~~-~~~~~~~pd~~~---~sl~el~~~l 254 (257)
T TIGR01458 181 -SKTFFLEALRATGCEPEEAVMIGDDCRDDVGGAQDCGMRGIQVRTGKYRPSD-EEKINVPPDLTC---DSLPHAVDLI 254 (257)
T ss_pred -CHHHHHHHHHHhCCChhhEEEECCCcHHHHHHHHHcCCeEEEECCCCCChHH-hcccCCCCCEEE---CCHHHHHHHH
Confidence 89999999999999999999999996 9999999988877776433223222 111112344555 8899988765
No 130
>PLN02382 probable sucrose-phosphatase
Probab=99.03 E-value=2.1e-09 Score=95.51 Aligned_cols=54 Identities=15% Similarity=0.114 Sum_probs=44.9
Q ss_pred cccccCCCCchHHHHHHHHHhc---CCCCceEEEEcCCCCCcccccCCCCCCeeeec
Q 044617 144 GCNLCPSNLCKGFVLDHVCTSF---GCGKQRFIYLGDGRGDFCPTLKLRDCDFVMPR 197 (265)
Q Consensus 144 ~~~~~~~~~~K~~~i~~~~~~~---gi~~~~~v~vGD~~~Di~~a~~~~~~~~~~~~ 197 (265)
..++.+.+.+|+.+++.+++++ |+++++++++||+.||++|.+.++..++++.+
T Consensus 166 ~ldI~p~g~sKg~Al~~L~~~~~~~gi~~~~~iafGDs~NDleMl~~ag~~gvam~N 222 (413)
T PLN02382 166 DLDVLPQGAGKGQALAYLLKKLKAEGKAPVNTLVCGDSGNDAELFSVPDVYGVMVSN 222 (413)
T ss_pred EEEEEeCCCCHHHHHHHHHHHhhhcCCChhcEEEEeCCHHHHHHHhcCCCCEEEEcC
Confidence 3477899999999999999999 99999999999999999999553434455544
No 131
>PLN02423 phosphomannomutase
Probab=99.03 E-value=8.4e-09 Score=85.56 Aligned_cols=39 Identities=18% Similarity=0.267 Sum_probs=34.9
Q ss_pred CcccccCCCCchHHHHHHHHHhcCCCCceEEEEcC----CCCCccccc
Q 044617 143 HGCNLCPSNLCKGFVLDHVCTSFGCGKQRFIYLGD----GRGDFCPTL 186 (265)
Q Consensus 143 ~~~~~~~~~~~K~~~i~~~~~~~gi~~~~~v~vGD----~~~Di~~a~ 186 (265)
.++++.+.|.+|+.+++.++ +++++++||| +.||++|.+
T Consensus 179 ~~iDi~~~gvnKg~al~~L~-----~~~e~~aFGD~~~~~~ND~eMl~ 221 (245)
T PLN02423 179 ISFDVFPQGWDKTYCLQFLE-----DFDEIHFFGDKTYEGGNDHEIFE 221 (245)
T ss_pred EEEEEeeCCCCHHHHHHHhc-----CcCeEEEEeccCCCCCCcHHHHh
Confidence 35578899999999999999 7899999999 799999984
No 132
>PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases. All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family.
Probab=99.00 E-value=2.4e-09 Score=82.61 Aligned_cols=94 Identities=12% Similarity=0.108 Sum_probs=65.9
Q ss_pred CCCCChhHHHHHHHHHHcCCc--EEEEeCCC-------HHHHHHHHHhcCcccccceEEecCceecCCCceEEeeccccc
Q 044617 69 QCPLDSHVAAAIKSAHSLGCD--LKIVSDAN-------QFYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRILPYHDST 139 (265)
Q Consensus 69 ~~~~~~g~~e~l~~l~~~g~~--~~ivS~~~-------~~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~ 139 (265)
...+.|...+.++++++.+.. ++|+||+. ...++.+.+.+|+. ++.. ..
T Consensus 57 ~~~i~~~~~~~~~~l~~~~~~~~v~IvSNsaGs~~d~~~~~a~~~~~~lgIp-----vl~h-----------------~~ 114 (168)
T PF09419_consen 57 EDEIPPEYAEWLNELKKQFGKDRVLIVSNSAGSSDDPDGERAEALEKALGIP-----VLRH-----------------RA 114 (168)
T ss_pred cCcCCHHHHHHHHHHHHHCCCCeEEEEECCCCcccCccHHHHHHHHHhhCCc-----EEEe-----------------CC
Confidence 346788999999999998764 99999983 56677777888863 2221 01
Q ss_pred cCCCcccccCCCCchHHHHHHHHHhcC-----CCCceEEEEcCCC-CCcccccCCCCCCeeeec
Q 044617 140 LSHHGCNLCPSNLCKGFVLDHVCTSFG-----CGKQRFIYLGDGR-GDFCPTLKLRDCDFVMPR 197 (265)
Q Consensus 140 ~kp~~~~~~~~~~~K~~~i~~~~~~~g-----i~~~~~v~vGD~~-~Di~~a~~~~~~~~~~~~ 197 (265)
+ ||..+..+++.++ ..|+++++|||.. +|+.+|.++|..++++-.
T Consensus 115 k-------------KP~~~~~i~~~~~~~~~~~~p~eiavIGDrl~TDVl~gN~~G~~tilv~~ 165 (168)
T PF09419_consen 115 K-------------KPGCFREILKYFKCQKVVTSPSEIAVIGDRLFTDVLMGNRMGSYTILVTD 165 (168)
T ss_pred C-------------CCccHHHHHHHHhhccCCCCchhEEEEcchHHHHHHHhhccCceEEEEec
Confidence 2 3333333333333 3589999999995 999999888877666643
No 133
>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional
Probab=98.99 E-value=1.4e-08 Score=96.76 Aligned_cols=76 Identities=14% Similarity=0.189 Sum_probs=55.7
Q ss_pred ccccCCCCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccCCCCCCeeeecCCCchhhhhhcCCCeeeEEEEeCCCHH
Q 044617 145 CNLCPSNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRDCDFVMPRKNYPLWDRICSNPMLIKAKVHEWSSAE 224 (265)
Q Consensus 145 ~~~~~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (265)
+++.|.+.+|+.+++.+++ +++++.++++||+.||..|.+.+...++.++-++ .+..++..+ ++.+
T Consensus 649 veV~p~~vnKG~al~~ll~--~~~~d~vl~~GD~~nDe~Mf~~~~~~~~~v~vG~---------~~s~A~~~l---~~~~ 714 (726)
T PRK14501 649 VEVRPAGVNKGRAVRRLLE--AGPYDFVLAIGDDTTDEDMFRALPETAITVKVGP---------GESRARYRL---PSQR 714 (726)
T ss_pred EEEEECCCCHHHHHHHHHh--cCCCCEEEEECCCCChHHHHHhcccCceEEEECC---------CCCcceEeC---CCHH
Confidence 3556889999999999999 6788899999999999999976543444544332 122233334 7888
Q ss_pred HHHHHHHHHH
Q 044617 225 ELKKILLHLI 234 (265)
Q Consensus 225 el~~~l~~~~ 234 (265)
|+.+.|+.+.
T Consensus 715 eV~~~L~~l~ 724 (726)
T PRK14501 715 EVRELLRRLL 724 (726)
T ss_pred HHHHHHHHHh
Confidence 9988888764
No 134
>TIGR00685 T6PP trehalose-phosphatase. At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes.
Probab=98.97 E-value=9.5e-09 Score=85.27 Aligned_cols=76 Identities=16% Similarity=0.088 Sum_probs=54.9
Q ss_pred cccCCCCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccCC-------CCCCeeeecCCCchhhhhhcCCCeeeEEEE
Q 044617 146 NLCPSNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKL-------RDCDFVMPRKNYPLWDRICSNPMLIKAKVH 218 (265)
Q Consensus 146 ~~~~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (265)
+..|.+.+|+.+++.+++++++.+.+++||||+.||+.+++.+ +..++.+. .+ . . ...++..+
T Consensus 160 e~~p~~~~Kg~a~~~~~~~~~~~~~~~i~iGD~~~D~~~~~~~~~~~~~~g~~~v~v~-~g--~---~---~~~A~~~~- 229 (244)
T TIGR00685 160 ELKPRFVNKGEIVKRLLWHQPGSGISPVYLGDDITDEDAFRVVNNQWGNYGFYPVPIG-SG--S---K---KTVAKFHL- 229 (244)
T ss_pred EEeeCCCCHHHHHHHHHHhcccCCCceEEEcCCCcHHHHHHHHhcccCCCCeEEEEEe-cC--C---c---CCCceEeC-
Confidence 3447788999999999999999999999999999999999765 22223332 11 0 1 11223334
Q ss_pred eCCCHHHHHHHHHHH
Q 044617 219 EWSSAEELKKILLHL 233 (265)
Q Consensus 219 ~~~~~~el~~~l~~~ 233 (265)
+++.++.++|+.+
T Consensus 230 --~~~~~v~~~L~~l 242 (244)
T TIGR00685 230 --TGPQQVLEFLGLL 242 (244)
T ss_pred --CCHHHHHHHHHHH
Confidence 8999999988765
No 135
>PTZ00445 p36-lilke protein; Provisional
Probab=98.96 E-value=1.1e-09 Score=86.48 Aligned_cols=112 Identities=11% Similarity=0.158 Sum_probs=75.4
Q ss_pred CCChhHHHHHHHHHHcCCcEEEEeCCCHH---------------HHHHHHHhcCcccccceEEec-CceecCCCceEEee
Q 044617 71 PLDSHVAAAIKSAHSLGCDLKIVSDANQF---------------YIETIMEHHGLLGCFSEIYTN-PTYVDEQGRLRILP 134 (265)
Q Consensus 71 ~~~~g~~e~l~~l~~~g~~~~ivS~~~~~---------------~i~~~l~~~gl~~~f~~i~~~-~~~~d~~~~~~~~~ 134 (265)
.+.|+++.++..|++.|++++|||=+... .++..++.-+.+..+..+++- ..++++...+
T Consensus 75 ~~tpefk~~~~~l~~~~I~v~VVTfSd~~~~~~~~~~~~Isg~~li~~~lk~s~~~~~i~~~~~yyp~~w~~p~~y---- 150 (219)
T PTZ00445 75 SVTPDFKILGKRLKNSNIKISVVTFSDKELIPSENRPRYISGDRMVEAALKKSKCDFKIKKVYAYYPKFWQEPSDY---- 150 (219)
T ss_pred cCCHHHHHHHHHHHHCCCeEEEEEccchhhccccCCcceechHHHHHHHHHhcCccceeeeeeeeCCcccCChhhh----
Confidence 56899999999999999999999865443 466666655544334445431 1111100000
Q ss_pred ccccccCCCcccccCCCCchHHH--H--HHHHHhcCCCCceEEEEcCCCCCcccccCCCCCCeeeec
Q 044617 135 YHDSTLSHHGCNLCPSNLCKGFV--L--DHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRDCDFVMPR 197 (265)
Q Consensus 135 ~~~~~~kp~~~~~~~~~~~K~~~--i--~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~~~~~~~~ 197 (265)
......|| .+.. + +++++++|+.|+++++|.|....+++|.++|..++.+..
T Consensus 151 ~~~gl~KP-----------dp~iK~yHle~ll~~~gl~peE~LFIDD~~~NVeaA~~lGi~ai~f~~ 206 (219)
T PTZ00445 151 RPLGLDAP-----------MPLDKSYHLKQVCSDFNVNPDEILFIDDDMNNCKNALKEGYIALHVTG 206 (219)
T ss_pred hhhcccCC-----------CccchHHHHHHHHHHcCCCHHHeEeecCCHHHHHHHHHCCCEEEEcCC
Confidence 00112233 2334 5 999999999999999999999999999998887766653
No 136
>COG4996 Predicted phosphatase [General function prediction only]
Probab=98.96 E-value=2.4e-09 Score=77.28 Aligned_cols=83 Identities=22% Similarity=0.179 Sum_probs=69.7
Q ss_pred CCCCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCcccccceEEecCceecCCCceEEeeccccccCCCccccc
Q 044617 69 QCPLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRILPYHDSTLSHHGCNLC 148 (265)
Q Consensus 69 ~~~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp~~~~~~ 148 (265)
...++|.++++++++++.|+-+..+|=+....+-..++.+++.+||+.++.. |++.
T Consensus 39 ev~L~~~v~~~l~warnsG~i~~~~sWN~~~kA~~aLral~~~~yFhy~Vie-------------PhP~----------- 94 (164)
T COG4996 39 EVHLFPDVKETLKWARNSGYILGLASWNFEDKAIKALRALDLLQYFHYIVIE-------------PHPY----------- 94 (164)
T ss_pred EEEEcHHHHHHHHHHHhCCcEEEEeecCchHHHHHHHHHhchhhhEEEEEec-------------CCCh-----------
Confidence 4688999999999999999999999988888888889999999999877763 4442
Q ss_pred CCCCchHHHHHHHHHhcC------CCCceEEEEcCCCC
Q 044617 149 PSNLCKGFVLDHVCTSFG------CGKQRFIYLGDGRG 180 (265)
Q Consensus 149 ~~~~~K~~~i~~~~~~~g------i~~~~~v~vGD~~~ 180 (265)
|..++.+++...+ +.|++++|+.|..-
T Consensus 95 -----K~~ML~~llr~i~~er~~~ikP~~Ivy~DDR~i 127 (164)
T COG4996 95 -----KFLMLSQLLREINTERNQKIKPSEIVYLDDRRI 127 (164)
T ss_pred -----hHHHHHHHHHHHHHhhccccCcceEEEEecccc
Confidence 7777777776654 78999999999853
No 137
>TIGR02244 HAD-IG-Ncltidse HAD superfamily (subfamily IG) hydrolase, 5'-nucleotidase. A TIGRFAMs model (TIGR01993) represents a (putative) family of _pyrimidine_ 5'-nucleotidases which are also subfamily I HAD's, which should not be confused with the current model.
Probab=98.90 E-value=1.5e-08 Score=87.00 Aligned_cols=126 Identities=14% Similarity=0.165 Sum_probs=85.9
Q ss_pred CCCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhc-C-------cccccceEEecC---ceecCCCceE--Eeecc
Q 044617 70 CPLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHH-G-------LLGCFSEIYTNP---TYVDEQGRLR--ILPYH 136 (265)
Q Consensus 70 ~~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~-g-------l~~~f~~i~~~~---~~~d~~~~~~--~~~~~ 136 (265)
+...||+.++|+.|+++|++++|+||+...+++.+++.+ | +.++|+.|++.. ..+. .++.- +.+.
T Consensus 183 v~~~pgl~elL~~Lr~~G~klfLvTNS~~~yt~~im~~l~g~~~~~~~w~~yFD~IIt~a~KP~FF~-~~~pf~~v~~~- 260 (343)
T TIGR02244 183 VLRDPKLPLFLSKLKEHGKKLFLLTNSDYDYTDKGMKYLLGPFLGEHDWRDYFDVVIVDARKPGFFT-EGRPFRQVDVE- 260 (343)
T ss_pred hccchhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhhCCcccccchHhhCcEEEeCCCCCcccC-CCCceEEEeCC-
Confidence 456899999999999999999999999999999999996 7 889999988752 1222 11110 0000
Q ss_pred ccccCCCcccccCC-CCchHHHHHHHHHhcCCCCceEEEEcCCC-CCccccc-CCCCCCeeeec
Q 044617 137 DSTLSHHGCNLCPS-NLCKGFVLDHVCTSFGCGKQRFIYLGDGR-GDFCPTL-KLRDCDFVMPR 197 (265)
Q Consensus 137 ~~~~kp~~~~~~~~-~~~K~~~i~~~~~~~gi~~~~~v~vGD~~-~Di~~a~-~~~~~~~~~~~ 197 (265)
....++........ ++=...-+..+.+.+|+.+++++||||.. .|+..++ .+|+.++.+..
T Consensus 261 ~g~~~~~~~~~l~~g~vY~gGn~~~~~~~l~~~~~~vlYvGD~i~~Di~~~kk~~Gw~TvlI~p 324 (343)
T TIGR02244 261 TGSLKWGEVDGLEPGKVYSGGSLKQFHELLKWRGKEVLYFGDHIYGDLLRSKKKRGWRTAAIIP 324 (343)
T ss_pred CCcccCCccccccCCCeEeCCCHHHHHHHHCCCCCcEEEECCcchHHHHhhHHhcCcEEEEEch
Confidence 00011111000000 11122446777888889999999999995 9999887 67877777764
No 138
>PLN02177 glycerol-3-phosphate acyltransferase
Probab=98.80 E-value=1.7e-07 Score=84.85 Aligned_cols=96 Identities=17% Similarity=0.154 Sum_probs=64.3
Q ss_pred CCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHh-cCcccccceEEecCceecCCCceEEeeccccccCCCcccccC
Q 044617 71 PLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEH-HGLLGCFSEIYTNPTYVDEQGRLRILPYHDSTLSHHGCNLCP 149 (265)
Q Consensus 71 ~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~-~gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp~~~~~~~ 149 (265)
.+.+.+.+.+ +++|. .+|+|.....+++++++. +|+ +.+++++..++.+|.+++.-.. + + |.
T Consensus 110 ~l~~~a~~~~---~~~g~-~vvVSASp~~~Vepfa~~~LGi----d~VIgTeLev~~~G~~TG~i~g-----~-~---~c 172 (497)
T PLN02177 110 DVHPETWRVF---NSFGK-RYIITASPRIMVEPFVKTFLGA----DKVLGTELEVSKSGRATGFMKK-----P-G---VL 172 (497)
T ss_pred hcCHHHHHHH---HhCCC-EEEEECCcHHHHHHHHHHcCCC----CEEEecccEECcCCEEeeeecC-----C-C---CC
Confidence 3667766554 55664 499999999999999976 785 4788988777556777653221 0 0 01
Q ss_pred CCCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccC
Q 044617 150 SNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLK 187 (265)
Q Consensus 150 ~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~ 187 (265)
.|..|...++ +.+|.+... +++||+.+|..+...
T Consensus 173 ~Ge~Kv~rl~---~~~g~~~~~-~aYgDS~sD~plL~~ 206 (497)
T PLN02177 173 VGDHKRDAVL---KEFGDALPD-LGLGDRETDHDFMSI 206 (497)
T ss_pred ccHHHHHHHH---HHhCCCCce-EEEECCccHHHHHHh
Confidence 2333555555 555544434 899999999998843
No 139
>PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming]
Probab=98.80 E-value=1.1e-07 Score=91.31 Aligned_cols=79 Identities=16% Similarity=0.210 Sum_probs=55.5
Q ss_pred ccccCCCCchHHHHHHHHHh---cCCCCceEEEEcCCCCCcccccCCCCC--C--e------eeecCCCchhhhhhcCCC
Q 044617 145 CNLCPSNLCKGFVLDHVCTS---FGCGKQRFIYLGDGRGDFCPTLKLRDC--D--F------VMPRKNYPLWDRICSNPM 211 (265)
Q Consensus 145 ~~~~~~~~~K~~~i~~~~~~---~gi~~~~~v~vGD~~~Di~~a~~~~~~--~--~------~~~~~~~~~~~~~~~~~~ 211 (265)
+++.+.+.+|+.+++.+++. .|++++.+++|||..||..|.+.++.. + + .-+..| ..++
T Consensus 754 vEV~p~gvnKG~Al~~Ll~~~~~~g~~~d~vl~~GDD~nDedMF~~~~~~~~g~~~~~~~~~~~v~VG--------~~~S 825 (854)
T PLN02205 754 VEVKPQGVSKGLVAKRLLSIMQERGMLPDFVLCIGDDRSDEDMFEVITSSMAGPSIAPRAEVFACTVG--------QKPS 825 (854)
T ss_pred EEEEeCCCCHHHHHHHHHHHHHhcCCCcccEEEEcCCccHHHHHHHhhhhccCCcccccccceeEEEC--------CCCc
Confidence 35568899999999999854 588999999999999999998665421 1 1 001111 1233
Q ss_pred eeeEEEEeCCCHHHHHHHHHHHH
Q 044617 212 LIKAKVHEWSSAEELKKILLHLI 234 (265)
Q Consensus 212 ~~~~~~~~~~~~~el~~~l~~~~ 234 (265)
.+...+ ++..|+.++|+.+.
T Consensus 826 ~A~y~L---~d~~eV~~lL~~L~ 845 (854)
T PLN02205 826 KAKYYL---DDTAEIVRLMQGLA 845 (854)
T ss_pred cCeEec---CCHHHHHHHHHHHH
Confidence 333334 99999999998876
No 140
>TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase. .
Probab=98.80 E-value=2.9e-08 Score=91.41 Aligned_cols=119 Identities=13% Similarity=0.083 Sum_probs=83.5
Q ss_pred CCCCChhHHHHHHHHHHcCC-cEEEEeCCCHHHHHHHHHhcCcccccceEEecCceecCCCceEEeeccccccCCCcccc
Q 044617 69 QCPLDSHVAAAIKSAHSLGC-DLKIVSDANQFYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRILPYHDSTLSHHGCNL 147 (265)
Q Consensus 69 ~~~~~~g~~e~l~~l~~~g~-~~~ivS~~~~~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp~~~~~ 147 (265)
...++||+.+.|++|+++|+ +++++||.....++.+++++|+.++|..+.. .
T Consensus 360 ~d~l~~~~~e~i~~L~~~Gi~~v~vvTgd~~~~a~~i~~~lgi~~~f~~~~p---------------~------------ 412 (536)
T TIGR01512 360 SDEPRPDAAEAIAELKALGIEKVVMLTGDRRAVAERVARELGIDEVHAELLP---------------E------------ 412 (536)
T ss_pred eccchHHHHHHHHHHHHcCCCcEEEEcCCCHHHHHHHHHHcCChhhhhccCc---------------H------------
Confidence 34689999999999999999 9999999999999999999999766542211 1
Q ss_pred cCCCCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccCCCCCCeeeecCCCchhhhhhcCCCeeeEEEEeCCCHHHHH
Q 044617 148 CPSNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRDCDFVMPRKNYPLWDRICSNPMLIKAKVHEWSSAEELK 227 (265)
Q Consensus 148 ~~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~ 227 (265)
.|...++++.++ .++++||||+.||+.++++ +++.++.+ +...+.... .++..+ .-+++.+|.
T Consensus 413 -----~K~~~i~~l~~~----~~~v~~vGDg~nD~~al~~---A~vgia~g-~~~~~~~~~---~ad~vl-~~~~l~~l~ 475 (536)
T TIGR01512 413 -----DKLEIVKELREK----YGPVAMVGDGINDAPALAA---ADVGIAMG-ASGSDVAIE---TADVVL-LNDDLSRLP 475 (536)
T ss_pred -----HHHHHHHHHHhc----CCEEEEEeCCHHHHHHHHh---CCEEEEeC-CCccHHHHH---hCCEEE-ECCCHHHHH
Confidence 277777776554 3799999999999999955 44555533 211222221 122332 226788877
Q ss_pred HHHH
Q 044617 228 KILL 231 (265)
Q Consensus 228 ~~l~ 231 (265)
+.+.
T Consensus 476 ~~i~ 479 (536)
T TIGR01512 476 QAIR 479 (536)
T ss_pred HHHH
Confidence 6543
No 141
>TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase. This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512.
Probab=98.80 E-value=3e-08 Score=91.83 Aligned_cols=118 Identities=15% Similarity=0.110 Sum_probs=83.4
Q ss_pred CCCCChhHHHHHHHHHHcC-CcEEEEeCCCHHHHHHHHHhcCcccccceEEecCceecCCCceEEeeccccccCCCcccc
Q 044617 69 QCPLDSHVAAAIKSAHSLG-CDLKIVSDANQFYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRILPYHDSTLSHHGCNL 147 (265)
Q Consensus 69 ~~~~~~g~~e~l~~l~~~g-~~~~ivS~~~~~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp~~~~~ 147 (265)
...++||+.++|++|+++| ++++++||.....+..+++++|+.++|..+. |.
T Consensus 382 ~d~~~~g~~e~l~~L~~~g~i~v~ivTgd~~~~a~~i~~~lgi~~~f~~~~---------------p~------------ 434 (556)
T TIGR01525 382 RDQLRPEAKEAIAALKRAGGIKLVMLTGDNRSAAEAVAAELGIDEVHAELL---------------PE------------ 434 (556)
T ss_pred cccchHhHHHHHHHHHHcCCCeEEEEeCCCHHHHHHHHHHhCCCeeeccCC---------------HH------------
Confidence 3478999999999999999 9999999999999999999999876554321 11
Q ss_pred cCCCCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccCCCCCCeeeecCCCchhhhhhcCCCeeeEEEEeCCCHHHHH
Q 044617 148 CPSNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRDCDFVMPRKNYPLWDRICSNPMLIKAKVHEWSSAEELK 227 (265)
Q Consensus 148 ~~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~ 227 (265)
.|+..++++.+ .+++++||||+.||+.+++++ ++.++.+ .+ .+.... .++..+. -+++..|.
T Consensus 435 -----~K~~~v~~l~~----~~~~v~~vGDg~nD~~al~~A---~vgia~g-~~-~~~~~~---~Ad~vi~-~~~~~~l~ 496 (556)
T TIGR01525 435 -----DKLAIVKELQE----EGGVVAMVGDGINDAPALAAA---DVGIAMG-AG-SDVAIE---AADIVLL-NDDLSSLP 496 (556)
T ss_pred -----HHHHHHHHHHH----cCCEEEEEECChhHHHHHhhC---CEeEEeC-CC-CHHHHH---hCCEEEe-CCCHHHHH
Confidence 27777777664 456999999999999999654 4555433 22 222221 2334332 25777777
Q ss_pred HHHH
Q 044617 228 KILL 231 (265)
Q Consensus 228 ~~l~ 231 (265)
+.++
T Consensus 497 ~~i~ 500 (556)
T TIGR01525 497 TAID 500 (556)
T ss_pred HHHH
Confidence 6543
No 142
>smart00775 LNS2 LNS2 domain. This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance.
Probab=98.79 E-value=3.9e-08 Score=75.81 Aligned_cols=104 Identities=11% Similarity=0.038 Sum_probs=62.1
Q ss_pred CCChhHHHHHHHHHHcCCcEEEEeCCCHHHHH---HHHHh-----cCcccccceEEec-CceecC-CCceEEeecccccc
Q 044617 71 PLDSHVAAAIKSAHSLGCDLKIVSDANQFYIE---TIMEH-----HGLLGCFSEIYTN-PTYVDE-QGRLRILPYHDSTL 140 (265)
Q Consensus 71 ~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~---~~l~~-----~gl~~~f~~i~~~-~~~~d~-~~~~~~~~~~~~~~ 140 (265)
.+.|++.+++++++++|++++++|+++...+. ..++. .++.. ..++++ ...+.+ .+. ....
T Consensus 27 ~~~~~~~~a~~~l~~~G~~ivy~TGRp~~~~~~t~~~l~~~~~~~~~lp~--g~li~~~g~~~~~~~~e-------~i~~ 97 (157)
T smart00775 27 WTHPGVAKLYRDIQNNGYKILYLTARPIGQADRTRSYLSQIKQDGHNLPH--GPVLLSPDRLFAALHRE-------VISK 97 (157)
T ss_pred cCCHHHHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHHHHHhhhccccCCC--ceEEEcCCcchhhhhcc-------cccC
Confidence 56899999999999999999999999877764 56655 22321 134433 111100 000 0001
Q ss_pred CCCcccccCCCCchHHHHHHHHHhcCCCCceE-EEEcCCCCCcccccCCCCC
Q 044617 141 SHHGCNLCPSNLCKGFVLDHVCTSFGCGKQRF-IYLGDGRGDFCPTLKLRDC 191 (265)
Q Consensus 141 kp~~~~~~~~~~~K~~~i~~~~~~~gi~~~~~-v~vGD~~~Di~~a~~~~~~ 191 (265)
.| ..-|...++.+.+.+.-.--.. ..+||+.+|+.+-.++|..
T Consensus 98 ~~--------~~~K~~~l~~i~~~~~~~~~~f~~~~gn~~~D~~~y~~~gi~ 141 (157)
T smart00775 98 KP--------EVFKIACLRDIKSLFPPQGNPFYAGFGNRITDVISYSAVGIP 141 (157)
T ss_pred CH--------HHHHHHHHHHHHHhcCCCCCCEEEEeCCCchhHHHHHHcCCC
Confidence 11 0126777887776553111234 4589999999887665553
No 143
>PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria []. SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B ....
Probab=98.78 E-value=7.7e-09 Score=85.87 Aligned_cols=52 Identities=19% Similarity=0.277 Sum_probs=40.3
Q ss_pred ccccCCCCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccCCCCCCeeeec
Q 044617 145 CNLCPSNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRDCDFVMPR 197 (265)
Q Consensus 145 ~~~~~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~~~~~~~~ 197 (265)
+++.|.+.+|..+++++++++++++++++++|||.||+.|... +..++++++
T Consensus 157 ldilP~~a~K~~Al~~L~~~~~~~~~~vl~aGDSgND~~mL~~-~~~~vvV~N 208 (247)
T PF05116_consen 157 LDILPKGASKGAALRYLMERWGIPPEQVLVAGDSGNDLEMLEG-GDHGVVVGN 208 (247)
T ss_dssp EEEEETT-SHHHHHHHHHHHHT--GGGEEEEESSGGGHHHHCC-SSEEEE-TT
T ss_pred EEEccCCCCHHHHHHHHHHHhCCCHHHEEEEeCCCCcHHHHcC-cCCEEEEcC
Confidence 4677999999999999999999999999999999999999833 434455544
No 144
>PLN02580 trehalose-phosphatase
Probab=98.77 E-value=2.3e-07 Score=80.87 Aligned_cols=82 Identities=20% Similarity=0.193 Sum_probs=56.0
Q ss_pred cccC-CCCchHHHHHHHHHhcCCCCce---EEEEcCCCCCcccccCCCC--CCeeeecCCCchhhhhhcCCCeeeEEEEe
Q 044617 146 NLCP-SNLCKGFVLDHVCTSFGCGKQR---FIYLGDGRGDFCPTLKLRD--CDFVMPRKNYPLWDRICSNPMLIKAKVHE 219 (265)
Q Consensus 146 ~~~~-~~~~K~~~i~~~~~~~gi~~~~---~v~vGD~~~Di~~a~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (265)
++.+ .+.+|+.+++.+++.++++..+ .+||||..||..|.+.+.. .++.++-.. .. ....+...
T Consensus 293 EVrP~~g~~KG~Av~~Ll~~~g~~~~d~~~pi~iGDD~TDedmF~~L~~~~~G~~I~Vgn-~~------~~t~A~y~--- 362 (384)
T PLN02580 293 EVRPVIDWNKGKAVEFLLESLGLSNCDDVLPIYIGDDRTDEDAFKVLREGNRGYGILVSS-VP------KESNAFYS--- 362 (384)
T ss_pred EEecCCCCCHHHHHHHHHHhcCCCcccceeEEEECCCchHHHHHHhhhccCCceEEEEec-CC------CCccceEE---
Confidence 4456 5999999999999999987653 3899999999998865332 233332111 00 11222333
Q ss_pred CCCHHHHHHHHHHHHHhh
Q 044617 220 WSSAEELKKILLHLIGAI 237 (265)
Q Consensus 220 ~~~~~el~~~l~~~~~~~ 237 (265)
.+++.|+.++|+.+..+.
T Consensus 363 L~dp~eV~~~L~~L~~~~ 380 (384)
T PLN02580 363 LRDPSEVMEFLKSLVTWK 380 (384)
T ss_pred cCCHHHHHHHHHHHHHhh
Confidence 499999999999987764
No 145
>PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A ....
Probab=98.76 E-value=8.6e-08 Score=68.25 Aligned_cols=49 Identities=12% Similarity=0.052 Sum_probs=34.7
Q ss_pred CCChhHHHHHHHHHHcCCcEEEEeCCCH---HHHHHHHHhcCcccccceEEe
Q 044617 71 PLDSHVAAAIKSAHSLGCDLKIVSDANQ---FYIETIMEHHGLLGCFSEIYT 119 (265)
Q Consensus 71 ~~~~g~~e~l~~l~~~g~~~~ivS~~~~---~~i~~~l~~~gl~~~f~~i~~ 119 (265)
.++||+.++|++|+++|.+++++||+.. ......++.+|+.-.-+.|++
T Consensus 14 ~~ipga~e~l~~L~~~g~~~~~lTNns~~s~~~~~~~L~~~Gi~~~~~~i~t 65 (101)
T PF13344_consen 14 EPIPGAVEALDALRERGKPVVFLTNNSSRSREEYAKKLKKLGIPVDEDEIIT 65 (101)
T ss_dssp EE-TTHHHHHHHHHHTTSEEEEEES-SSS-HHHHHHHHHHTTTT--GGGEEE
T ss_pred CcCcCHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHHHhcCcCCCcCEEEC
Confidence 4689999999999999999999999853 334445578887644444554
No 146
>PF13242 Hydrolase_like: HAD-hyrolase-like; PDB: 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A 2HX1_D 2X4D_A 3HLT_C 3L1U_B ....
Probab=98.74 E-value=5.8e-09 Score=70.14 Aligned_cols=69 Identities=14% Similarity=0.111 Sum_probs=52.5
Q ss_pred hHHHHHHHHHhcCCCCceEEEEcCC-CCCcccccCCCCCCeeeecCCCchhhhhhcCCCeeeEEEEeCCCHHHH
Q 044617 154 KGFVLDHVCTSFGCGKQRFIYLGDG-RGDFCPTLKLRDCDFVMPRKNYPLWDRICSNPMLIKAKVHEWSSAEEL 226 (265)
Q Consensus 154 K~~~i~~~~~~~gi~~~~~v~vGD~-~~Di~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el 226 (265)
++.++..++++++++++++++|||+ ..|+.+|+++|..++.+..+.+.... +......++..+ +++.|+
T Consensus 6 ~p~~~~~a~~~~~~~~~~~~~VGD~~~~Di~~a~~~G~~~ilV~tG~~~~~~-~~~~~~~pd~vv---~~l~e~ 75 (75)
T PF13242_consen 6 SPGMLEQALKRLGVDPSRCVMVGDSLETDIEAAKAAGIDTILVLTGVYSPED-LEKAEHKPDYVV---DDLKEA 75 (75)
T ss_dssp SHHHHHHHHHHHTSGGGGEEEEESSTTTHHHHHHHTTSEEEEESSSSSCCCG-HHHSSSTTSEEE---SSGGGH
T ss_pred cHHHHHHHHHHcCCCHHHEEEEcCCcHhHHHHHHHcCCcEEEECCCCCCHHH-HhccCCCCCEEE---CCHHhC
Confidence 8999999999999999999999999 99999999988877777665444333 321222445556 777664
No 147
>TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA. Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant.
Probab=98.73 E-value=3.6e-08 Score=81.35 Aligned_cols=46 Identities=9% Similarity=0.015 Sum_probs=38.7
Q ss_pred CCchHHHHHHHHHhcCCCCceE-EEEcCCC-CCcccccCCCCCCeeee
Q 044617 151 NLCKGFVLDHVCTSFGCGKQRF-IYLGDGR-GDFCPTLKLRDCDFVMP 196 (265)
Q Consensus 151 ~~~K~~~i~~~~~~~gi~~~~~-v~vGD~~-~Di~~a~~~~~~~~~~~ 196 (265)
+..++..++.++++++++++++ +||||+. +|+.+|+++|...+.+.
T Consensus 187 ~KP~~~~~~~~~~~~~~~~~~~~~~IGD~~~~Di~~A~~~G~~~i~v~ 234 (236)
T TIGR01460 187 GKPSPAIYRAALNLLQARPERRDVMVGDNLRTDILGAKNAGFDTLLVL 234 (236)
T ss_pred cCCCHHHHHHHHHHhCCCCccceEEECCCcHHHHHHHHHCCCcEEEEe
Confidence 3457799999999999988887 9999998 89999998887666553
No 148
>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)
Probab=98.64 E-value=9.8e-09 Score=85.09 Aligned_cols=97 Identities=9% Similarity=-0.044 Sum_probs=73.0
Q ss_pred ChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCcccccceE--EecCceecCCCceEEeeccccccCCCcccccCC
Q 044617 73 DSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEI--YTNPTYVDEQGRLRILPYHDSTLSHHGCNLCPS 150 (265)
Q Consensus 73 ~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~~i--~~~~~~~d~~~~~~~~~~~~~~~kp~~~~~~~~ 150 (265)
++++.++++.+.++|+++ |+||....+....+..++...+|..+ .+. . + ....||
T Consensus 140 ~~~~~~~l~~l~~~g~~~-i~tN~d~~~~~~~~~~~~~g~~~~~i~~~g~--------~----~--~~~gKP-------- 196 (242)
T TIGR01459 140 LDEFDELFAPIVARKIPN-ICANPDRGINQHGIYRYGAGYYAELIKQLGG--------K----V--IYSGKP-------- 196 (242)
T ss_pred HHHHHHHHHHHHhCCCcE-EEECCCEeccCCCceEecccHHHHHHHHhCC--------c----E--ecCCCC--------
Confidence 689999999998889997 88999887776666666665554433 221 0 1 123466
Q ss_pred CCchHHHHHHHHHhcCCC-CceEEEEcCC-CCCcccccCCCCCCeee
Q 044617 151 NLCKGFVLDHVCTSFGCG-KQRFIYLGDG-RGDFCPTLKLRDCDFVM 195 (265)
Q Consensus 151 ~~~K~~~i~~~~~~~gi~-~~~~v~vGD~-~~Di~~a~~~~~~~~~~ 195 (265)
++..++.++++++.. +++++||||+ .+|+.+|+++|...+.+
T Consensus 197 ---~~~~~~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~~G~~~i~v 240 (242)
T TIGR01459 197 ---YPAIFHKALKECSNIPKNRMLMVGDSFYTDILGANRLGIDTALV 240 (242)
T ss_pred ---CHHHHHHHHHHcCCCCcccEEEECCCcHHHHHHHHHCCCeEEEE
Confidence 899999999999864 6799999999 69999998877765554
No 149
>TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase. One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification.
Probab=98.63 E-value=2.4e-07 Score=85.85 Aligned_cols=88 Identities=14% Similarity=0.183 Sum_probs=69.8
Q ss_pred CCCCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCcccccceEEecCceecCCCceEEeeccccccCCCccccc
Q 044617 69 QCPLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRILPYHDSTLSHHGCNLC 148 (265)
Q Consensus 69 ~~~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp~~~~~~ 148 (265)
...++||+.++|++|+++|++++++|++....++.+++++|++ +++.. . |.
T Consensus 403 ~d~l~~~a~e~i~~Lk~~Gi~v~ilSgd~~~~a~~ia~~lgi~-----~~~~~---~--------p~------------- 453 (562)
T TIGR01511 403 EDQLRPEAKEVIQALKRRGIEPVMLTGDNRKTAKAVAKELGIN-----VRAEV---L--------PD------------- 453 (562)
T ss_pred cccccHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHcCCc-----EEccC---C--------hH-------------
Confidence 3468999999999999999999999999999999999999984 33310 0 11
Q ss_pred CCCCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccCCCCCCeeee
Q 044617 149 PSNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRDCDFVMP 196 (265)
Q Consensus 149 ~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~~~~~~~ 196 (265)
.|...++++.+ .+++++||||+.||+.++++ +++.++
T Consensus 454 ----~K~~~v~~l~~----~~~~v~~VGDg~nD~~al~~---A~vgia 490 (562)
T TIGR01511 454 ----DKAALIKELQE----KGRVVAMVGDGINDAPALAQ---ADVGIA 490 (562)
T ss_pred ----HHHHHHHHHHH----cCCEEEEEeCCCccHHHHhh---CCEEEE
Confidence 27888877765 45799999999999999965 445554
No 150
>COG4229 Predicted enolase-phosphatase [Energy production and conversion]
Probab=98.59 E-value=7.8e-07 Score=68.21 Aligned_cols=104 Identities=15% Similarity=0.172 Sum_probs=79.6
Q ss_pred CCCCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhc---CcccccceEEecCceecCCCceEEeeccccccCCCcc
Q 044617 69 QCPLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHH---GLLGCFSEIYTNPTYVDEQGRLRILPYHDSTLSHHGC 145 (265)
Q Consensus 69 ~~~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~---gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp~~~ 145 (265)
..+++|++.+.|++-++.|++++|-|++.....+-+..+- ++..+|+..+... . .+
T Consensus 101 kahlypDav~~ik~wk~~g~~vyiYSSGSV~AQkL~Fghs~agdL~~lfsGyfDtt-------------i-----G~--- 159 (229)
T COG4229 101 KAHLYPDAVQAIKRWKALGMRVYIYSSGSVKAQKLFFGHSDAGDLNSLFSGYFDTT-------------I-----GK--- 159 (229)
T ss_pred ccccCHhHHHHHHHHHHcCCcEEEEcCCCchhHHHhhcccccccHHhhhcceeecc-------------c-----cc---
Confidence 4588999999999999999999999999887766665543 3344444433310 0 00
Q ss_pred cccCCCCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccCCCCCCeeeecCC
Q 044617 146 NLCPSNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRDCDFVMPRKN 199 (265)
Q Consensus 146 ~~~~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~~~~~~~~~~ 199 (265)
.-...-+.++++..|++|.++++..|.++-+.+|+.+|+++....+.|
T Consensus 160 ------KrE~~SY~kIa~~iGl~p~eilFLSDn~~EL~AA~~vGl~t~l~~R~g 207 (229)
T COG4229 160 ------KRESQSYAKIAGDIGLPPAEILFLSDNPEELKAAAGVGLATGLAVRPG 207 (229)
T ss_pred ------cccchhHHHHHHhcCCCchheEEecCCHHHHHHHHhcchheeeeecCC
Confidence 113567899999999999999999999999999999899887777654
No 151
>COG4087 Soluble P-type ATPase [General function prediction only]
Probab=98.58 E-value=3.5e-07 Score=66.28 Aligned_cols=119 Identities=14% Similarity=0.164 Sum_probs=81.2
Q ss_pred CCCCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCcccccceEEecCceecCCCceEEeeccccccCCCccccc
Q 044617 69 QCPLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRILPYHDSTLSHHGCNLC 148 (265)
Q Consensus 69 ~~~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp~~~~~~ 148 (265)
..++++.+.+.|+.|++. +.++|+|+.....+...++..|+... .++.. ...
T Consensus 28 gGklf~ev~e~iqeL~d~-V~i~IASgDr~gsl~~lae~~gi~~~--rv~a~-------------a~~------------ 79 (152)
T COG4087 28 GGKLFSEVSETIQELHDM-VDIYIASGDRKGSLVQLAEFVGIPVE--RVFAG-------------ADP------------ 79 (152)
T ss_pred CcEEcHhhHHHHHHHHHh-heEEEecCCcchHHHHHHHHcCCcee--eeecc-------------cCH------------
Confidence 468899999999999999 99999999999999999999997633 34431 000
Q ss_pred CCCCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccCCCCCCeeeecCC--CchhhhhhcCCCeeeEEEEeCCCHHHH
Q 044617 149 PSNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRDCDFVMPRKN--YPLWDRICSNPMLIKAKVHEWSSAEEL 226 (265)
Q Consensus 149 ~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~el 226 (265)
..|...++.+-+ +.+.++||||+.||+.+.+ .++++++.-+ .....++. .++..+ .+..|+
T Consensus 80 ---e~K~~ii~eLkk----~~~k~vmVGnGaND~laLr---~ADlGI~tiq~e~v~~r~l~----~ADvvi---k~i~e~ 142 (152)
T COG4087 80 ---EMKAKIIRELKK----RYEKVVMVGNGANDILALR---EADLGICTIQQEGVPERLLL----TADVVL---KEIAEI 142 (152)
T ss_pred ---HHHHHHHHHhcC----CCcEEEEecCCcchHHHhh---hcccceEEeccCCcchHHHh----hchhhh---hhHHHH
Confidence 116666666665 4488999999999998884 4555544322 11111111 123344 777887
Q ss_pred HHHHHH
Q 044617 227 KKILLH 232 (265)
Q Consensus 227 ~~~l~~ 232 (265)
++++..
T Consensus 143 ldl~~~ 148 (152)
T COG4087 143 LDLLKD 148 (152)
T ss_pred HHHhhc
Confidence 777654
No 152
>TIGR02250 FCP1_euk FCP1-like phosphatase, phosphatase domain. This domain is related to domains found in the human NLI interacting factor-like phosphatases, and together both are detected by the Pfam model pfam03031.
Probab=98.53 E-value=3.3e-07 Score=70.53 Aligned_cols=51 Identities=18% Similarity=0.272 Sum_probs=44.0
Q ss_pred CCCCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCccc-cc-ceEEec
Q 044617 69 QCPLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLG-CF-SEIYTN 120 (265)
Q Consensus 69 ~~~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~-~f-~~i~~~ 120 (265)
...++||+.++|+.+++. ++++|+|++...++..+++.++... +| +.+++.
T Consensus 56 ~v~~rPgv~efL~~l~~~-yel~I~T~~~~~yA~~vl~~ldp~~~~F~~ri~~r 108 (156)
T TIGR02250 56 LTKLRPFLHEFLKEASKL-YEMHVYTMGTRAYAQAIAKLIDPDGKYFGDRIISR 108 (156)
T ss_pred EEEECCCHHHHHHHHHhh-cEEEEEeCCcHHHHHHHHHHhCcCCCeeccEEEEe
Confidence 456799999999999965 9999999999999999999999874 77 556653
No 153
>KOG2882 consensus p-Nitrophenyl phosphatase [Inorganic ion transport and metabolism]
Probab=98.53 E-value=9.1e-07 Score=73.36 Aligned_cols=56 Identities=14% Similarity=0.076 Sum_probs=46.4
Q ss_pred CCchHHHHHHHHHhcCCCCceEEEEcCCC-CCcccccCCCCCCeeeecCCCchhhhh
Q 044617 151 NLCKGFVLDHVCTSFGCGKQRFIYLGDGR-GDFCPTLKLRDCDFVMPRKNYPLWDRI 206 (265)
Q Consensus 151 ~~~K~~~i~~~~~~~gi~~~~~v~vGD~~-~Di~~a~~~~~~~~~~~~~~~~~~~~~ 206 (265)
|...+.+++.+.++++++|++++||||+. +||.-++++|..++.+..+.....+..
T Consensus 223 GKP~~~m~~~l~~~~~i~psRt~mvGDRL~TDIlFG~~~G~~TLLvltGv~~led~~ 279 (306)
T KOG2882|consen 223 GKPSTFMFEYLLEKFNIDPSRTCMVGDRLDTDILFGKNCGFKTLLVLSGVTTLEDIL 279 (306)
T ss_pred CCCCHHHHHHHHHHcCCCcceEEEEcccchhhhhHhhccCcceEEEecCcCcHHHHH
Confidence 33356889999999999999999999995 999999999999888887765555543
No 154
>COG4030 Uncharacterized protein conserved in archaea [Function unknown]
Probab=98.53 E-value=7.9e-06 Score=65.03 Aligned_cols=189 Identities=12% Similarity=0.076 Sum_probs=113.2
Q ss_pred EEEecCCCCCCCCchHHHHHHhCch-H-H------HHHH----HccCChh--HHHHHHHHHHHhCCCCHHHHHHHhcC-C
Q 044617 6 VVFDFDRTLIDDDSDNWVVTQMGLT-H-L------FNQL----RSTLPWN--SLMDRMMKELHSQGKTVEDIANCLRQ-C 70 (265)
Q Consensus 6 iifD~DGTL~ds~~~~~~~~~~~~~-~-~------~~~~----~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 70 (265)
+++||.|-+.-.+....++..+-.. . . +..+ .++-++. .-..-+...+...|.+.+.+++.... .
T Consensus 3 fvtD~EGP~sl~D~A~E~~a~~~pngrrfF~~~SeyDD~la~E~rReGYeaG~TLkLivPFL~ahGVt~~dlrr~sE~sa 82 (315)
T COG4030 3 FVTDWEGPWSLTDFALELCAAVFPNGRRFFSNLSEYDDYLAYEVRREGYEAGYTLKLIVPFLAAHGVTNRDLRRISELSA 82 (315)
T ss_pred ccccCCCCCccchhHHHHHHHHcCCHHHHHHhhhhhhhHHHHHHhccCCCCCcchhhHHHHHHHhcCcHHHHHHHHHhhc
Confidence 7899999999887655544443222 1 1 1111 1111111 01122334455668888888776654 7
Q ss_pred CCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCcccccceEEecCceecCCCceE-----------------E-
Q 044617 71 PLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLR-----------------I- 132 (265)
Q Consensus 71 ~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~-----------------~- 132 (265)
++.||+.+.++.|.++ +.-+++|.+...++.+.....|+..- .+++.+..+|+--.+. .
T Consensus 83 ~lvPgA~etm~~l~~~-~tp~v~STSY~qy~~r~a~~ig~Prg--~~~~Te~~lD~~~~PeeeR~E~L~~~~~~~~~~ge 159 (315)
T COG4030 83 KLVPGAEETMATLQER-WTPVVISTSYTQYLRRTASMIGVPRG--ELHGTEVDLDSIAVPEEEREELLSIIDVIASLSGE 159 (315)
T ss_pred ccCCChHHHHHHHhcc-CCceEEeccHHHHHHHHHHhcCCCcc--ccccccccCccccCChHHHHHHHHhcCccccccHH
Confidence 8999999999999997 77788898999999999999887422 3344333333100000 0
Q ss_pred ------eeccccccCCCcc-ccc----CC-CCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccCCCCCC-eeeecCC
Q 044617 133 ------LPYHDSTLSHHGC-NLC----PS-NLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRDCD-FVMPRKN 199 (265)
Q Consensus 133 ------~~~~~~~~kp~~~-~~~----~~-~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~~~-~~~~~~~ 199 (265)
.... ...-|... ++| .. |..|...++.+++-.+++.. +++||||.+|+.|.+.+...+ ++++..|
T Consensus 160 elfe~lDe~F-~rLip~E~gki~~~vk~VGgg~ka~i~e~~~ele~~d~s-a~~VGDSItDv~ml~~~rgrGglAvaFNG 237 (315)
T COG4030 160 ELFEKLDELF-SRLIPSEVGKIVESVKAVGGGEKAKIMEGYCELEGIDFS-AVVVGDSITDVKMLEAARGRGGLAVAFNG 237 (315)
T ss_pred HHHHHHHHHH-hhcCHHHHHHHHHhhhhccCcchhHHHHHHHhhcCCCcc-eeEecCcccchHHHHHhhccCceEEEecC
Confidence 0000 00011111 111 12 33467788888888777765 899999999999988776655 5555544
No 155
>PRK10671 copA copper exporting ATPase; Provisional
Probab=98.52 E-value=5.2e-07 Score=87.45 Aligned_cols=117 Identities=19% Similarity=0.146 Sum_probs=82.2
Q ss_pred CCCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCcccccceEEecCceecCCCceEEeeccccccCCCcccccC
Q 044617 70 CPLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRILPYHDSTLSHHGCNLCP 149 (265)
Q Consensus 70 ~~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp~~~~~~~ 149 (265)
-+++|++.+.|++|+++|++++++|+.....++.+++++|+.++ ++. .. |.
T Consensus 649 d~~r~~a~~~i~~L~~~gi~v~~~Tgd~~~~a~~ia~~lgi~~~----~~~---~~--------p~-------------- 699 (834)
T PRK10671 649 DPLRSDSVAALQRLHKAGYRLVMLTGDNPTTANAIAKEAGIDEV----IAG---VL--------PD-------------- 699 (834)
T ss_pred CcchhhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCEE----EeC---CC--------HH--------------
Confidence 36789999999999999999999999999999999999998643 331 00 11
Q ss_pred CCCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccCCCCCCeeeecCCCchhhhhhcCCCeeeEEEEeCCCHHHHHHH
Q 044617 150 SNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRDCDFVMPRKNYPLWDRICSNPMLIKAKVHEWSSAEELKKI 229 (265)
Q Consensus 150 ~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~ 229 (265)
.|...++.+. ..+++++||||+.||+.++++ +++.++-+ .+...... ..+..+ ..+++.+|...
T Consensus 700 ---~K~~~i~~l~----~~~~~v~~vGDg~nD~~al~~---Agvgia~g-~g~~~a~~----~ad~vl-~~~~~~~i~~~ 763 (834)
T PRK10671 700 ---GKAEAIKRLQ----SQGRQVAMVGDGINDAPALAQ---ADVGIAMG-GGSDVAIE----TAAITL-MRHSLMGVADA 763 (834)
T ss_pred ---HHHHHHHHHh----hcCCEEEEEeCCHHHHHHHHh---CCeeEEec-CCCHHHHH----hCCEEE-ecCCHHHHHHH
Confidence 2777666654 346799999999999999955 44455433 22222121 122322 23888888888
Q ss_pred HH
Q 044617 230 LL 231 (265)
Q Consensus 230 l~ 231 (265)
++
T Consensus 764 i~ 765 (834)
T PRK10671 764 LA 765 (834)
T ss_pred HH
Confidence 76
No 156
>COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=98.52 E-value=7.4e-07 Score=83.65 Aligned_cols=116 Identities=15% Similarity=0.143 Sum_probs=84.4
Q ss_pred CCCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCcccccceEEecCceecCCCceEEeeccccccCCCcccccC
Q 044617 70 CPLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRILPYHDSTLSHHGCNLCP 149 (265)
Q Consensus 70 ~~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp~~~~~~~ 149 (265)
-++.|++++.++.|+++|+++.++|+.....++.+.+++|+++++..+. |.
T Consensus 536 D~~R~~a~~aI~~L~~~Gi~~~mLTGDn~~~A~~iA~~lGId~v~Aell---------------Pe-------------- 586 (713)
T COG2217 536 DELRPDAKEAIAALKALGIKVVMLTGDNRRTAEAIAKELGIDEVRAELL---------------PE-------------- 586 (713)
T ss_pred CCCChhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcChHhheccCC---------------cH--------------
Confidence 3789999999999999999999999999999999999999864432211 22
Q ss_pred CCCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccCCCCCCeeeecCC-CchhhhhhcCCCeeeEEEEeCCCHHHHHH
Q 044617 150 SNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRDCDFVMPRKN-YPLWDRICSNPMLIKAKVHEWSSAEELKK 228 (265)
Q Consensus 150 ~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~el~~ 228 (265)
.|.+.++++.++. ..+.|||||.||-.+. ..+++.++-+. ..... + ..|..+.. +++..|..
T Consensus 587 ---dK~~~V~~l~~~g----~~VamVGDGINDAPAL---A~AdVGiAmG~GtDvA~--e----aADvvL~~-~dL~~v~~ 649 (713)
T COG2217 587 ---DKAEIVRELQAEG----RKVAMVGDGINDAPAL---AAADVGIAMGSGTDVAI--E----AADVVLMR-DDLSAVPE 649 (713)
T ss_pred ---HHHHHHHHHHhcC----CEEEEEeCCchhHHHH---hhcCeeEeecCCcHHHH--H----hCCEEEec-CCHHHHHH
Confidence 2999999988653 5799999999999887 56777777553 22221 1 23333322 56666666
Q ss_pred HHH
Q 044617 229 ILL 231 (265)
Q Consensus 229 ~l~ 231 (265)
.++
T Consensus 650 ai~ 652 (713)
T COG2217 650 AID 652 (713)
T ss_pred HHH
Confidence 543
No 157
>PF05822 UMPH-1: Pyrimidine 5'-nucleotidase (UMPH-1); InterPro: IPR006434 This family is a small group of metazoan sequences with sequences from Arabidopsis thaliana (Mouse-ear cress) and rice. The sequences represent pyrimidine 5-nucleotidases, apparently in reference to HSPC233, the Homo sapiens (Human) homologue []. The structure of mouse sequence has been reported []. This group of sequences was originally found during searches for members of the haloacid dehalogenase (HAD) superfamily (IPR005834 from INTERPRO). All of the conserved catalytic motifs [] are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches of that subfamily (IA-ID) as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.; GO: 0000287 magnesium ion binding, 0008253 5'-nucleotidase activity, 0005737 cytoplasm; PDB: 2BDU_B 2G07_A 2G06_A 2G0A_A 2Q4T_A 2G09_A 2G08_A 2VKQ_A 2CN1_A 2JGA_A.
Probab=98.48 E-value=3.3e-06 Score=68.94 Aligned_cols=121 Identities=20% Similarity=0.167 Sum_probs=75.3
Q ss_pred CCCCHHHHHHHhc--CCCCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCcccccceEEecCceecCCCceEEe
Q 044617 56 QGKTVEDIANCLR--QCPLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRIL 133 (265)
Q Consensus 56 ~~~~~~~~~~~~~--~~~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~ 133 (265)
.+...+.+.+.+. .+.+.+|+.++++.|+++++|+.|.|+|....+..++++.+....=-.|++|...+|++|.+...
T Consensus 73 ~~l~k~~i~~~V~~s~i~LRdg~~~~f~~L~~~~IP~lIFSAGlgdvI~~vL~q~~~~~~Nv~VvSN~M~Fd~~g~l~gF 152 (246)
T PF05822_consen 73 QGLTKSEIEEAVKESDIMLRDGVEEFFDKLEEHNIPLLIFSAGLGDVIEEVLRQAGVFHPNVKVVSNFMDFDEDGVLVGF 152 (246)
T ss_dssp HT-BGGGHHHHHHCS---B-BTHHHHHHHHHCTT--EEEEEEEEHHHHHHHHHHTT--BTTEEEEEE-EEE-TTSBEEEE
T ss_pred cCcCHHHHHHHHHhcchhhhcCHHHHHHHHHhcCCCEEEEeCCcHHHHHHHHHHcCCCCCCeEEEeeeEEECCcceEeec
Confidence 3555555655554 56789999999999999999999999999999999999987543323699999999988887753
Q ss_pred eccccccCCCcccccCCCCchHHHHH---HHHHhcCCCCceEEEEcCCCCCcccccCC
Q 044617 134 PYHDSTLSHHGCNLCPSNLCKGFVLD---HVCTSFGCGKQRFIYLGDGRGDFCPTLKL 188 (265)
Q Consensus 134 ~~~~~~~kp~~~~~~~~~~~K~~~i~---~~~~~~gi~~~~~v~vGD~~~Di~~a~~~ 188 (265)
..+.. |. .+|-.... ...+++. ...+++..||+..|+.|+..+
T Consensus 153 ~~~lI----H~-------~NKn~~~l~~~~~~~~~~-~R~NvlLlGDslgD~~Ma~G~ 198 (246)
T PF05822_consen 153 KGPLI----HT-------FNKNESALEDSPYFKQLK-KRTNVLLLGDSLGDLHMADGV 198 (246)
T ss_dssp -SS-------T-------T-HHHHHHTTHHHHHCTT-T--EEEEEESSSGGGGTTTT-
T ss_pred CCCce----EE-------eeCCcccccCchHHHHhc-cCCcEEEecCccCChHhhcCC
Confidence 21110 10 12443222 2223322 346899999999999999644
No 158
>PLN03017 trehalose-phosphatase
Probab=98.47 E-value=1.3e-05 Score=69.49 Aligned_cols=79 Identities=23% Similarity=0.206 Sum_probs=53.1
Q ss_pred CCCchHHHHHHHHHhcCCCC---ceEEEEcCCCCCcccccCCCC--CCeeeecCCCchhhhhhcCCCeeeEEEEeCCCHH
Q 044617 150 SNLCKGFVLDHVCTSFGCGK---QRFIYLGDGRGDFCPTLKLRD--CDFVMPRKNYPLWDRICSNPMLIKAKVHEWSSAE 224 (265)
Q Consensus 150 ~~~~K~~~i~~~~~~~gi~~---~~~v~vGD~~~Di~~a~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (265)
.+.+|+.+++.+++.++... .-.+|+||-.+|-.+-+.+.. .++.+.-+ .. ..+..+... .+++.
T Consensus 280 ~~~dKG~Av~~LL~~l~~~~~~~~~pvyiGDD~TDEDaF~~L~~~~~G~gI~VG-~~------~k~T~A~y~---L~dp~ 349 (366)
T PLN03017 280 IEWDKGKALEFLLESLGFGNTNNVFPVYIGDDRTDEDAFKMLRDRGEGFGILVS-KF------PKDTDASYS---LQDPS 349 (366)
T ss_pred CCCCHHHHHHHHHHhcccccCCCceEEEeCCCCccHHHHHHHhhcCCceEEEEC-CC------CCCCcceEe---CCCHH
Confidence 47889999999999987542 358999999999988765432 12332211 10 011222333 39999
Q ss_pred HHHHHHHHHHHhhc
Q 044617 225 ELKKILLHLIGAIS 238 (265)
Q Consensus 225 el~~~l~~~~~~~~ 238 (265)
|+.++|+.+..+..
T Consensus 350 eV~~fL~~L~~~~~ 363 (366)
T PLN03017 350 EVMDFLARLVEWKQ 363 (366)
T ss_pred HHHHHHHHHHHHHh
Confidence 99999999987643
No 159
>KOG3040 consensus Predicted sugar phosphatase (HAD superfamily) [General function prediction only]
Probab=98.44 E-value=1.7e-06 Score=67.81 Aligned_cols=78 Identities=9% Similarity=0.151 Sum_probs=56.3
Q ss_pred CCchHHHHHHHHHhcCCCCceEEEEcCCC-CCcccccCCCCCCeeeecCCCchhhhhhcCCCeeeEEEEeCCCHHHHHHH
Q 044617 151 NLCKGFVLDHVCTSFGCGKQRFIYLGDGR-GDFCPTLKLRDCDFVMPRKNYPLWDRICSNPMLIKAKVHEWSSAEELKKI 229 (265)
Q Consensus 151 ~~~K~~~i~~~~~~~gi~~~~~v~vGD~~-~Di~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~ 229 (265)
|...+..++.+++.+|++|++++||||-. .|+-.|.++|+.++.+-.+-|...+..+. +..++... ++|.|-.++
T Consensus 180 GKP~~~fFe~al~~~gv~p~~aVMIGDD~~dDvgGAq~~GMrgilVkTGK~rpsDe~k~-~~~p~~~~---d~f~~AVd~ 255 (262)
T KOG3040|consen 180 GKPSPFFFESALQALGVDPEEAVMIGDDLNDDVGGAQACGMRGILVKTGKFRPSDEEKP-PVPPDLTA---DNFADAVDL 255 (262)
T ss_pred cCCCHHHHHHHHHhcCCChHHheEEccccccchhhHhhhcceeEEeeccccCCcccccC-CCCcchhh---hhHHHHHHH
Confidence 34467889999999999999999999985 78889999999999988776665443321 11233334 777775555
Q ss_pred HHH
Q 044617 230 LLH 232 (265)
Q Consensus 230 l~~ 232 (265)
|-+
T Consensus 256 I~q 258 (262)
T KOG3040|consen 256 IIQ 258 (262)
T ss_pred HHh
Confidence 443
No 160
>TIGR01675 plant-AP plant acid phosphatase. This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases.
Probab=98.44 E-value=5.3e-06 Score=67.40 Aligned_cols=45 Identities=13% Similarity=0.096 Sum_probs=38.3
Q ss_pred CCCCChhHHHHHHHHHHcCCcEEEEeCCCHHH---HHHHHHhcCcccc
Q 044617 69 QCPLDSHVAAAIKSAHSLGCDLKIVSDANQFY---IETIMEHHGLLGC 113 (265)
Q Consensus 69 ~~~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~---i~~~l~~~gl~~~ 113 (265)
..+..|+++++++.++++|++++++|++.... +...|...|+..+
T Consensus 118 ~apaip~al~l~~~l~~~G~~Vf~lTGR~e~~r~~T~~nL~~~G~~~~ 165 (229)
T TIGR01675 118 AAPALPEGLKLYQKIIELGIKIFLLSGRWEELRNATLDNLINAGFTGW 165 (229)
T ss_pred CCCCCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHHcCCCCc
Confidence 56789999999999999999999999998665 6666778887654
No 161
>TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase. Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology.
Probab=98.39 E-value=1.7e-06 Score=63.80 Aligned_cols=48 Identities=23% Similarity=0.312 Sum_probs=36.8
Q ss_pred CCCChhHHHHHHHHHHcCCcEEEEeCCCHHH---------------HHHHHHhcCcccccceEEe
Q 044617 70 CPLDSHVAAAIKSAHSLGCDLKIVSDANQFY---------------IETIMEHHGLLGCFSEIYT 119 (265)
Q Consensus 70 ~~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~---------------i~~~l~~~gl~~~f~~i~~ 119 (265)
..+.+++.+.|+.++++|+.++++|++.... +...++..++. ++.++-
T Consensus 23 ~~~~~~~ie~L~~l~~~G~~IiiaTGR~~~~~~~n~~~i~~~~~~~t~~wL~k~~ip--Yd~l~~ 85 (126)
T TIGR01689 23 VAPILAVIEKLRHYKALGFEIVISSSRNMRTYEGNVGKINIHTLPIIILWLNQHNVP--YDEIYV 85 (126)
T ss_pred cccCHHHHHHHHHHHHCCCEEEEECCCCchhhhccccccchhhHHHHHHHHHHcCCC--CceEEe
Confidence 3578999999999999999999999986653 45566677765 455554
No 162
>PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25). The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A ....
Probab=98.37 E-value=1.3e-06 Score=71.58 Aligned_cols=90 Identities=16% Similarity=0.189 Sum_probs=57.8
Q ss_pred CCCChhHHHHHHHHHHcCCcEEEEeCCCHH---HHHHHHHhcCcccccceEEecCceecCCCceEEeeccccccCCCccc
Q 044617 70 CPLDSHVAAAIKSAHSLGCDLKIVSDANQF---YIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRILPYHDSTLSHHGCN 146 (265)
Q Consensus 70 ~~~~~g~~e~l~~l~~~g~~~~ivS~~~~~---~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp~~~~ 146 (265)
.+..||+.++++.++++|+.++++||+... ....-|+..|+..+ +.++-. +.... .+.
T Consensus 114 ~~aip~a~~l~~~~~~~G~~V~~iT~R~~~~r~~T~~nL~~~G~~~~-~~l~lr-------------~~~~~-~~~---- 174 (229)
T PF03767_consen 114 APAIPGALELYNYARSRGVKVFFITGRPESQREATEKNLKKAGFPGW-DHLILR-------------PDKDP-SKK---- 174 (229)
T ss_dssp GEEETTHHHHHHHHHHTTEEEEEEEEEETTCHHHHHHHHHHHTTSTB-SCGEEE-------------EESST-SS-----
T ss_pred CcccHHHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHHcCCCcc-chhccc-------------ccccc-ccc----
Confidence 367899999999999999999999997654 44455677786543 222211 00000 000
Q ss_pred ccCCCCchHHHHHHHHHh-cCCCCceEEEEcCCCCCccc
Q 044617 147 LCPSNLCKGFVLDHVCTS-FGCGKQRFIYLGDGRGDFCP 184 (265)
Q Consensus 147 ~~~~~~~K~~~i~~~~~~-~gi~~~~~v~vGD~~~Di~~ 184 (265)
.....|......+.++ +.| +.+|||..+|+..
T Consensus 175 --~~~~yK~~~r~~i~~~Gy~I----i~~iGD~~~D~~~ 207 (229)
T PF03767_consen 175 --SAVEYKSERRKEIEKKGYRI----IANIGDQLSDFSG 207 (229)
T ss_dssp -------SHHHHHHHHHTTEEE----EEEEESSGGGCHC
T ss_pred --cccccchHHHHHHHHcCCcE----EEEeCCCHHHhhc
Confidence 0112267777777776 433 7799999999987
No 163
>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458. This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.
Probab=98.37 E-value=2.1e-06 Score=71.76 Aligned_cols=49 Identities=12% Similarity=0.139 Sum_probs=38.0
Q ss_pred CCChhHHHHHHHHHHcCCcEEEEeCCCHH---HHHHHHHhcCcccccceEEe
Q 044617 71 PLDSHVAAAIKSAHSLGCDLKIVSDANQF---YIETIMEHHGLLGCFSEIYT 119 (265)
Q Consensus 71 ~~~~g~~e~l~~l~~~g~~~~ivS~~~~~---~i~~~l~~~gl~~~f~~i~~ 119 (265)
.+.|++.+.|+.|+++|++++++||+... .+...++.+|+.--.+.+++
T Consensus 21 ~~~~~a~~al~~l~~~G~~~~~~Tn~~~~~~~~~~~~l~~~g~~~~~~~i~t 72 (257)
T TIGR01458 21 VAVPGSQEAVKRLRGASVKVRFVTNTTKESKQDLLERLQRLGFDISEDEVFT 72 (257)
T ss_pred CcCCCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHcCCCCCHHHeEc
Confidence 37899999999999999999999997554 46666777887533445555
No 164
>TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116.
Probab=98.34 E-value=3.8e-06 Score=81.89 Aligned_cols=136 Identities=13% Similarity=0.050 Sum_probs=84.6
Q ss_pred CCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCcccccceEEecCceecCCC---------ceEEeeccccccC
Q 044617 71 PLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTNPTYVDEQG---------RLRILPYHDSTLS 141 (265)
Q Consensus 71 ~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~---------~~~~~~~~~~~~k 141 (265)
+++|++++.++.|++.|+++.++||.....+..+.+.+|+...+..+++.... +.-. ...+.... .
T Consensus 528 p~r~~~~~~i~~l~~~Gi~v~miTGD~~~tA~~ia~~~Gi~~~~~~~v~g~~l-~~~~~~~l~~~~~~~~Vfar~----~ 602 (884)
T TIGR01522 528 PPRPGVKEAVTTLITGGVRIIMITGDSQETAVSIARRLGMPSKTSQSVSGEKL-DAMDDQQLSQIVPKVAVFARA----S 602 (884)
T ss_pred cchhHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCCceeEhHHh-HhCCHHHHHHHhhcCeEEEEC----C
Confidence 67999999999999999999999999999999999999997665544332110 0000 00000000 0
Q ss_pred CCcccccCCCCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccCCCCCCeeeecCCCchhhhhhcCCCeeeEEEEeCC
Q 044617 142 HHGCNLCPSNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRDCDFVMPRKNYPLWDRICSNPMLIKAKVHEWS 221 (265)
Q Consensus 142 p~~~~~~~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (265)
| ..|...++.+.+ . .+.+.|+|||.||..|+++ ++++++-+ ....+..++ .++..+. -+
T Consensus 603 P---------~~K~~iv~~lq~-~---g~~v~mvGDGvND~pAl~~---AdVGia~g-~~g~~va~~---aaDivl~-dd 661 (884)
T TIGR01522 603 P---------EHKMKIVKALQK-R---GDVVAMTGDGVNDAPALKL---ADIGVAMG-QTGTDVAKE---AADMILT-DD 661 (884)
T ss_pred H---------HHHHHHHHHHHH-C---CCEEEEECCCcccHHHHHh---CCeeEecC-CCcCHHHHH---hcCEEEc-CC
Confidence 1 126566655443 2 3689999999999999954 55666542 211222221 1234332 26
Q ss_pred CHHHHHHHHHH
Q 044617 222 SAEELKKILLH 232 (265)
Q Consensus 222 ~~~el~~~l~~ 232 (265)
++..|...++.
T Consensus 662 ~~~~i~~~i~~ 672 (884)
T TIGR01522 662 DFATILSAIEE 672 (884)
T ss_pred CHHHHHHHHHH
Confidence 68887776543
No 165
>TIGR01497 kdpB K+-transporting ATPase, B subunit. One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR.
Probab=98.34 E-value=2.6e-06 Score=79.71 Aligned_cols=115 Identities=11% Similarity=0.089 Sum_probs=82.6
Q ss_pred CCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCcccccceEEecCceecCCCceEEeeccccccCCCcccccCC
Q 044617 71 PLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRILPYHDSTLSHHGCNLCPS 150 (265)
Q Consensus 71 ~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp~~~~~~~~ 150 (265)
++.|++++.+++|++.|+++.++|+.....+..+.+++|+.+ +++. .. |.
T Consensus 446 ~~Rp~a~eaI~~l~~~Gi~v~miTGD~~~ta~~iA~~lGI~~----v~a~---~~--------Pe--------------- 495 (675)
T TIGR01497 446 IVKGGIKERFAQLRKMGIKTIMITGDNRLTAAAIAAEAGVDD----FIAE---AT--------PE--------------- 495 (675)
T ss_pred cchhHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCE----EEcC---CC--------HH---------------
Confidence 688999999999999999999999999999999999999853 3442 00 22
Q ss_pred CCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccCCCCCCeeeecC-CCchhhhhhcCCCeeeEEEEeCCCHHHHHHH
Q 044617 151 NLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRDCDFVMPRK-NYPLWDRICSNPMLIKAKVHEWSSAEELKKI 229 (265)
Q Consensus 151 ~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~ 229 (265)
+|...++.+.++- ..+.|+||+.||..+. ..++++++-. |... .++. .+... --+||..|.+.
T Consensus 496 --dK~~~v~~lq~~g----~~VamvGDG~NDapAL---~~AdvGiAm~~gt~~---akea---adivL-ldd~~s~Iv~a 559 (675)
T TIGR01497 496 --DKIALIRQEQAEG----KLVAMTGDGTNDAPAL---AQADVGVAMNSGTQA---AKEA---ANMVD-LDSDPTKLIEV 559 (675)
T ss_pred --HHHHHHHHHHHcC----CeEEEECCCcchHHHH---HhCCEeEEeCCCCHH---HHHh---CCEEE-CCCCHHHHHHH
Confidence 2888998886653 4699999999999888 4566666643 2222 2221 12322 23677777665
Q ss_pred HH
Q 044617 230 LL 231 (265)
Q Consensus 230 l~ 231 (265)
++
T Consensus 560 v~ 561 (675)
T TIGR01497 560 VH 561 (675)
T ss_pred HH
Confidence 54
No 166
>PRK01122 potassium-transporting ATPase subunit B; Provisional
Probab=98.33 E-value=3.2e-06 Score=79.26 Aligned_cols=116 Identities=11% Similarity=0.064 Sum_probs=83.5
Q ss_pred CCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCcccccceEEecCceecCCCceEEeeccccccCCCcccccCC
Q 044617 71 PLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRILPYHDSTLSHHGCNLCPS 150 (265)
Q Consensus 71 ~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp~~~~~~~~ 150 (265)
++.||+++.+++|++.|+++.++|+.+...+..+.+++|+++ +++.- .|.
T Consensus 445 ~~R~~~~eai~~Lr~~GI~vvMiTGDn~~TA~aIA~elGId~----v~A~~-----------~Pe--------------- 494 (679)
T PRK01122 445 IVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAEAGVDD----FLAEA-----------TPE--------------- 494 (679)
T ss_pred cCchhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCcE----EEccC-----------CHH---------------
Confidence 678999999999999999999999999999999999999853 44420 022
Q ss_pred CCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccCCCCCCeeeecC-CCchhhhhhcCCCeeeEEEEeCCCHHHHHHH
Q 044617 151 NLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRDCDFVMPRK-NYPLWDRICSNPMLIKAKVHEWSSAEELKKI 229 (265)
Q Consensus 151 ~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~ 229 (265)
.|...++.+.++- +-+.|+|||.||..+. ..++++++-+ |....+ + ..+... .-+||.-|.+.
T Consensus 495 --dK~~iV~~lQ~~G----~~VaMtGDGvNDAPAL---a~ADVGIAMgsGTdvAk---e---AADiVL-ldd~~s~Iv~a 558 (679)
T PRK01122 495 --DKLALIRQEQAEG----RLVAMTGDGTNDAPAL---AQADVGVAMNSGTQAAK---E---AGNMVD-LDSNPTKLIEV 558 (679)
T ss_pred --HHHHHHHHHHHcC----CeEEEECCCcchHHHH---HhCCEeEEeCCCCHHHH---H---hCCEEE-eCCCHHHHHHH
Confidence 2888888877642 4588999999999888 4566666644 322222 2 123333 23678777776
Q ss_pred HHH
Q 044617 230 LLH 232 (265)
Q Consensus 230 l~~ 232 (265)
++.
T Consensus 559 v~~ 561 (679)
T PRK01122 559 VEI 561 (679)
T ss_pred HHH
Confidence 543
No 167
>PLN02151 trehalose-phosphatase
Probab=98.33 E-value=2e-05 Score=68.14 Aligned_cols=79 Identities=22% Similarity=0.186 Sum_probs=52.0
Q ss_pred CCCchHHHHHHHHHhcCCCCc---eEEEEcCCCCCcccccCCCC--CCeeeecCCCchhhhhhcCCCeeeEEEEeCCCHH
Q 044617 150 SNLCKGFVLDHVCTSFGCGKQ---RFIYLGDGRGDFCPTLKLRD--CDFVMPRKNYPLWDRICSNPMLIKAKVHEWSSAE 224 (265)
Q Consensus 150 ~~~~K~~~i~~~~~~~gi~~~---~~v~vGD~~~Di~~a~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (265)
.+.+|+.+++.++++++..-. -.+|+||-.+|-.+-+.+.. .++.+.-. .. ..+..+...+ .++.
T Consensus 266 ~~~dKG~Av~~Ll~~~~~~~~~~~~pvyiGDD~TDEDaF~~L~~~~~G~gI~Vg-~~------~k~T~A~y~L---~dp~ 335 (354)
T PLN02151 266 IKWDKGKALEFLLESLGYANCTDVFPIYIGDDRTDEDAFKILRDKKQGLGILVS-KY------AKETNASYSL---QEPD 335 (354)
T ss_pred CCCCHHHHHHHHHHhcccccCCCCeEEEEcCCCcHHHHHHHHhhcCCCccEEec-cC------CCCCcceEeC---CCHH
Confidence 478999999999999875422 38999999999887654432 12222211 00 0122233334 9999
Q ss_pred HHHHHHHHHHHhhc
Q 044617 225 ELKKILLHLIGAIS 238 (265)
Q Consensus 225 el~~~l~~~~~~~~ 238 (265)
|+.++|..+..+..
T Consensus 336 eV~~~L~~L~~~~~ 349 (354)
T PLN02151 336 EVMEFLERLVEWKQ 349 (354)
T ss_pred HHHHHHHHHHHhhh
Confidence 99999999887643
No 168
>PRK14010 potassium-transporting ATPase subunit B; Provisional
Probab=98.33 E-value=2.9e-06 Score=79.45 Aligned_cols=115 Identities=13% Similarity=0.121 Sum_probs=82.3
Q ss_pred CCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCcccccceEEecCceecCCCceEEeeccccccCCCcccccCC
Q 044617 71 PLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRILPYHDSTLSHHGCNLCPS 150 (265)
Q Consensus 71 ~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp~~~~~~~~ 150 (265)
++.|++++.+++|++.|+++.++|+.+...+..+.+++|+.+ +++. . .|.+
T Consensus 441 p~R~~a~e~I~~Lr~~GI~vvMiTGDn~~TA~aIA~elGI~~----v~A~---~--------~Ped-------------- 491 (673)
T PRK14010 441 VIKDGLVERFRELREMGIETVMCTGDNELTAATIAKEAGVDR----FVAE---C--------KPED-------------- 491 (673)
T ss_pred CCcHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCce----EEcC---C--------CHHH--------------
Confidence 789999999999999999999999999999999999999864 3442 0 0222
Q ss_pred CCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccCCCCCCeeeecC-CCchhhhhhcCCCeeeEEEEeCCCHHHHHHH
Q 044617 151 NLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRDCDFVMPRK-NYPLWDRICSNPMLIKAKVHEWSSAEELKKI 229 (265)
Q Consensus 151 ~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~ 229 (265)
|...++.+.++ -+.+.|+|||.||..+. ..++++++-+ |.... ++. .+... .-+|+..|.+.
T Consensus 492 ---K~~iV~~lQ~~----G~~VaMtGDGvNDAPAL---a~ADVGIAMgsGTdvA---keA---ADiVL-ldd~ls~Iv~a 554 (673)
T PRK14010 492 ---KINVIREEQAK----GHIVAMTGDGTNDAPAL---AEANVGLAMNSGTMSA---KEA---ANLID-LDSNPTKLMEV 554 (673)
T ss_pred ---HHHHHHHHHhC----CCEEEEECCChhhHHHH---HhCCEEEEeCCCCHHH---HHh---CCEEE-cCCCHHHHHHH
Confidence 88888887654 24688999999999888 4567666654 32222 221 22332 22667776665
Q ss_pred HH
Q 044617 230 LL 231 (265)
Q Consensus 230 l~ 231 (265)
++
T Consensus 555 v~ 556 (673)
T PRK14010 555 VL 556 (673)
T ss_pred HH
Confidence 54
No 169
>PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional
Probab=98.29 E-value=2e-06 Score=82.18 Aligned_cols=115 Identities=14% Similarity=0.069 Sum_probs=80.1
Q ss_pred CCCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCcccccceEEecCceecCCCceEEeeccccccCCCcccccC
Q 044617 70 CPLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRILPYHDSTLSHHGCNLCP 149 (265)
Q Consensus 70 ~~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp~~~~~~~ 149 (265)
-+++|++.+.|++|+++|++++++|+.....+..+.+++|+..+ .. .. |.
T Consensus 567 d~~r~~a~~~i~~L~~~gi~~~llTGd~~~~a~~ia~~lgi~~~-----~~---~~--------p~-------------- 616 (741)
T PRK11033 567 DTLRADARQAISELKALGIKGVMLTGDNPRAAAAIAGELGIDFR-----AG---LL--------PE-------------- 616 (741)
T ss_pred cCCchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCee-----cC---CC--------HH--------------
Confidence 37899999999999999999999999999999999999998521 11 00 11
Q ss_pred CCCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccCCCCCCeeeecCCCchhhhhhcCCCeeeEEEEeCCCHHHHHHH
Q 044617 150 SNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRDCDFVMPRKNYPLWDRICSNPMLIKAKVHEWSSAEELKKI 229 (265)
Q Consensus 150 ~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~ 229 (265)
.|+..++.+.+. .+++||||+.||..++++ +++.++-++ +... ..+ ..++.+ ..+++.+|...
T Consensus 617 ---~K~~~v~~l~~~-----~~v~mvGDgiNDapAl~~---A~vgia~g~-~~~~-a~~---~adivl-~~~~l~~l~~~ 679 (741)
T PRK11033 617 ---DKVKAVTELNQH-----APLAMVGDGINDAPAMKA---ASIGIAMGS-GTDV-ALE---TADAAL-THNRLRGLAQM 679 (741)
T ss_pred ---HHHHHHHHHhcC-----CCEEEEECCHHhHHHHHh---CCeeEEecC-CCHH-HHH---hCCEEE-ecCCHHHHHHH
Confidence 288888877532 579999999999999854 445555432 2221 211 123333 23777777755
Q ss_pred HH
Q 044617 230 LL 231 (265)
Q Consensus 230 l~ 231 (265)
+.
T Consensus 680 i~ 681 (741)
T PRK11033 680 IE 681 (741)
T ss_pred HH
Confidence 43
No 170
>PF05152 DUF705: Protein of unknown function (DUF705); InterPro: IPR007827 This family contains uncharacterised baculoviral proteins.
Probab=98.26 E-value=1.5e-05 Score=65.73 Aligned_cols=111 Identities=17% Similarity=0.113 Sum_probs=73.6
Q ss_pred CChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCcccccceEEecCceecCCC-ceEEe--eccccccCCCccccc
Q 044617 72 LDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTNPTYVDEQG-RLRIL--PYHDSTLSHHGCNLC 148 (265)
Q Consensus 72 ~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~-~~~~~--~~~~~~~kp~~~~~~ 148 (265)
..|.+.+.|..|+++|..+++=|-|..+.+...++.+++..+|+.+++.+-...+.. ..... ....-..+|+-.+.-
T Consensus 143 r~~~v~~sL~~Lk~~g~vLvLWSyG~~eHV~~sl~~~~L~~~Fd~ii~~G~~~~~~~~~~~~d~~~~~~f~~~~FylDv~ 222 (297)
T PF05152_consen 143 RDPAVYDSLRELKEQGCVLVLWSYGNREHVRHSLKELKLEGYFDIIICGGNKAGEYNSRVIVDRQYKVIFVSKPFYLDVT 222 (297)
T ss_pred CChHHHHHHHHHHHcCCEEEEecCCCHHHHHHHHHHhCCccccEEEEeCCccCCcCCccceeecccceEEeccceEEeCC
Confidence 368899999999999999999999999999999999999999999998643322111 10000 000001123222221
Q ss_pred CC-CCch-HHHHHHHHHhcCCCCc-eEEEEcCCC-CCc
Q 044617 149 PS-NLCK-GFVLDHVCTSFGCGKQ-RFIYLGDGR-GDF 182 (265)
Q Consensus 149 ~~-~~~K-~~~i~~~~~~~gi~~~-~~v~vGD~~-~Di 182 (265)
.. +..| |.++...+++.|+..- -+..|.|=. ||+
T Consensus 223 ~~~~LPKSPrVVL~yL~k~gvny~KtiTLVDDL~~Nn~ 260 (297)
T PF05152_consen 223 NVNNLPKSPRVVLWYLRKKGVNYFKTITLVDDLKSNNY 260 (297)
T ss_pred cCCCCCCCCeehHHHHHHcCCceeeeEEEeccCcccCc
Confidence 11 1334 6899999999998864 455777753 555
No 171
>PF03031 NIF: NLI interacting factor-like phosphatase; InterPro: IPR004274 The function of this domain is unclear. It is found in proteins of diverse function including phosphatases some of which may be active in active in ternary elongation complexes and a number of NLI interacting factors. In the phospatases this domain is often present N-terminal to the BRCT domain (IPR001357 from INTERPRO).; GO: 0005515 protein binding; PDB: 3L0Y_A 2GHQ_A 3PGL_A 3L0C_B 1TA0_A 2GHT_A 3L0B_B 1T9Z_A 3QLE_A 2Q5E_E ....
Probab=98.18 E-value=7.5e-06 Score=63.26 Aligned_cols=85 Identities=12% Similarity=0.163 Sum_probs=55.4
Q ss_pred CCCCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCc-ccccceEEecCceecCCCceEEeeccccccCCCcccc
Q 044617 69 QCPLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGL-LGCFSEIYTNPTYVDEQGRLRILPYHDSTLSHHGCNL 147 (265)
Q Consensus 69 ~~~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl-~~~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp~~~~~ 147 (265)
.+.+.||+.++|+.+.+. +.++|.|++...++..+++.++- ..+|..+++........+.
T Consensus 34 ~v~~RP~l~~FL~~l~~~-~ev~i~T~~~~~ya~~v~~~ldp~~~~~~~~~~r~~~~~~~~~------------------ 94 (159)
T PF03031_consen 34 YVKLRPGLDEFLEELSKH-YEVVIWTSASEEYAEPVLDALDPNGKLFSRRLYRDDCTFDKGS------------------ 94 (159)
T ss_dssp EEEE-TTHHHHHHHHHHH-CEEEEE-SS-HHHHHHHHHHHTTTTSSEEEEEEGGGSEEETTE------------------
T ss_pred eEeeCchHHHHHHHHHHh-ceEEEEEeehhhhhhHHHHhhhhhccccccccccccccccccc------------------
Confidence 356789999999999775 99999999999999999999886 4567777764211000000
Q ss_pred cCCCCchHHHHHHHHHhcCCCCceEEEEcCCCCCc
Q 044617 148 CPSNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDF 182 (265)
Q Consensus 148 ~~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di 182 (265)
. + +-++..|-+++++++|.|++.-.
T Consensus 95 ------~---~-KdL~~l~~~~~~vvivDD~~~~~ 119 (159)
T PF03031_consen 95 ------Y---I-KDLSKLGRDLDNVVIVDDSPRKW 119 (159)
T ss_dssp ------E---E---GGGSSS-GGGEEEEES-GGGG
T ss_pred ------c---c-cchHHHhhccccEEEEeCCHHHe
Confidence 0 0 22444466789999999997644
No 172
>TIGR01680 Veg_Stor_Prot vegetative storage protein. The proteins represented by this model are close relatives of the plant acid phosphatases (TIGR01675), are limited to members of the Phaseoleae including Glycine max (soybean) and Phaseolus vulgaris (kidney bean). These proteins are highly expressed in the leaves of repeatedly depodded plants. VSP differs most strinkingly from the acid phosphatases in the lack of the conserved nucleophilic aspartate residue in the N-terminus, thus, they should be inactive as phosphatases. This issue was confused by the publication in 1992 of an article claiming activity for the Glycine max VSP. In 1994 this assertion was refuted by the separation of the activity from the VSP.
Probab=98.17 E-value=4e-05 Score=63.48 Aligned_cols=45 Identities=16% Similarity=0.130 Sum_probs=35.6
Q ss_pred CCCCChhHHHHHHHHHHcCCcEEEEeCCCHHH---HHHHHHhcCcccc
Q 044617 69 QCPLDSHVAAAIKSAHSLGCDLKIVSDANQFY---IETIMEHHGLLGC 113 (265)
Q Consensus 69 ~~~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~---i~~~l~~~gl~~~ 113 (265)
..+..|+++++++.++++|++++++||+.... ...-|+..|+..+
T Consensus 143 ~ApAlp~al~ly~~l~~~G~kIf~VSgR~e~~r~aT~~NL~kaGy~~~ 190 (275)
T TIGR01680 143 EAPALPETLKNYNKLVSLGFKIIFLSGRLKDKQAVTEANLKKAGYHTW 190 (275)
T ss_pred cCCCChHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHHcCCCCc
Confidence 56778999999999999999999999997543 4444566777543
No 173
>KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=98.10 E-value=2.8e-05 Score=73.28 Aligned_cols=116 Identities=14% Similarity=0.166 Sum_probs=83.8
Q ss_pred CCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCcccccceEEecCceecCCCceEEeeccccccCCCcccccCC
Q 044617 71 PLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRILPYHDSTLSHHGCNLCPS 150 (265)
Q Consensus 71 ~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp~~~~~~~~ 150 (265)
.+.|++...+..|+++|++++++|+.....++.+.++.| ++.|++.- .|.
T Consensus 723 ~vr~~a~~av~~Lk~~Gi~v~mLTGDn~~aA~svA~~VG----i~~V~aev-----------~P~--------------- 772 (951)
T KOG0207|consen 723 QVRPDAALAVAELKSMGIKVVMLTGDNDAAARSVAQQVG----IDNVYAEV-----------LPE--------------- 772 (951)
T ss_pred ccchhHHHHHHHHHhcCceEEEEcCCCHHHHHHHHHhhC----cceEEecc-----------Cch---------------
Confidence 678999999999999999999999999999999999999 55777731 022
Q ss_pred CCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccCCCCCCeeeecC-CCchhhhhhcCCCeeeEEEEeCCCHHHHHHH
Q 044617 151 NLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRDCDFVMPRK-NYPLWDRICSNPMLIKAKVHEWSSAEELKKI 229 (265)
Q Consensus 151 ~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~ 229 (265)
.|.+.++.+.+.- ..+.|||||.||-.+. ..++++++-. |.... .+ ..+... --++..++...
T Consensus 773 --~K~~~Ik~lq~~~----~~VaMVGDGINDaPAL---A~AdVGIaig~gs~vA--ie----aADIVL-mrn~L~~v~~a 836 (951)
T KOG0207|consen 773 --QKAEKIKEIQKNG----GPVAMVGDGINDAPAL---AQADVGIAIGAGSDVA--IE----AADIVL-MRNDLRDVPFA 836 (951)
T ss_pred --hhHHHHHHHHhcC----CcEEEEeCCCCccHHH---HhhccceeeccccHHH--Hh----hCCEEE-EccchhhhHHH
Confidence 2888999888764 5699999999999777 4566555543 22221 11 122222 22667777776
Q ss_pred HHH
Q 044617 230 LLH 232 (265)
Q Consensus 230 l~~ 232 (265)
+.-
T Consensus 837 i~L 839 (951)
T KOG0207|consen 837 IDL 839 (951)
T ss_pred HHH
Confidence 653
No 174
>PRK15122 magnesium-transporting ATPase; Provisional
Probab=98.09 E-value=1.7e-05 Score=77.44 Aligned_cols=133 Identities=20% Similarity=0.215 Sum_probs=83.2
Q ss_pred CCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCcccccceEEec-Cce-ecCC------CceEEeeccccccCC
Q 044617 71 PLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTN-PTY-VDEQ------GRLRILPYHDSTLSH 142 (265)
Q Consensus 71 ~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~~i~~~-~~~-~d~~------~~~~~~~~~~~~~kp 142 (265)
++.|++++.++.|++.|+++.++|+.....+..+.+++|+.. +.+++. +.. .++. ....+... ..|
T Consensus 550 p~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~aIA~~lGI~~--~~vi~G~el~~~~~~el~~~v~~~~VfAr----~sP 623 (903)
T PRK15122 550 PPKESAAPAIAALRENGVAVKVLTGDNPIVTAKICREVGLEP--GEPLLGTEIEAMDDAALAREVEERTVFAK----LTP 623 (903)
T ss_pred ccHHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCC--CCccchHhhhhCCHHHHHHHhhhCCEEEE----eCH
Confidence 678999999999999999999999999999999999999852 122211 100 0000 00000000 011
Q ss_pred CcccccCCCCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccCCCCCCeeeecC-CCchhhhhhcCCCeeeEEEEeCC
Q 044617 143 HGCNLCPSNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRDCDFVMPRK-NYPLWDRICSNPMLIKAKVHEWS 221 (265)
Q Consensus 143 ~~~~~~~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 221 (265)
..|...++.+.++ -+.+.|+|||.||..+. +.++++++-+ |....+ + ..+.... -+
T Consensus 624 ---------e~K~~iV~~Lq~~----G~vVamtGDGvNDaPAL---k~ADVGIAmg~gtdvAk---e---aADiVLl-dd 680 (903)
T PRK15122 624 ---------LQKSRVLKALQAN----GHTVGFLGDGINDAPAL---RDADVGISVDSGADIAK---E---SADIILL-EK 680 (903)
T ss_pred ---------HHHHHHHHHHHhC----CCEEEEECCCchhHHHH---HhCCEEEEeCcccHHHH---H---hcCEEEe-cC
Confidence 2288888877654 25688999999999888 4566666644 332222 1 2334332 26
Q ss_pred CHHHHHHHHHH
Q 044617 222 SAEELKKILLH 232 (265)
Q Consensus 222 ~~~el~~~l~~ 232 (265)
|+..|...++.
T Consensus 681 ~f~~Iv~ai~~ 691 (903)
T PRK15122 681 SLMVLEEGVIK 691 (903)
T ss_pred ChHHHHHHHHH
Confidence 77776665543
No 175
>TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase. The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis.
Probab=98.09 E-value=2.1e-05 Score=76.55 Aligned_cols=132 Identities=16% Similarity=0.212 Sum_probs=83.1
Q ss_pred CCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCcccccceEEec-Cce-ecCC------CceEEeeccccccCC
Q 044617 71 PLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTN-PTY-VDEQ------GRLRILPYHDSTLSH 142 (265)
Q Consensus 71 ~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~~i~~~-~~~-~d~~------~~~~~~~~~~~~~kp 142 (265)
++.|++++.++.|++.|+++.++|+.....+..+.+++|+..- .++.. +.. .++. ....+... ..|
T Consensus 515 p~R~~~~~aI~~l~~aGI~vvmiTGD~~~tA~aIA~~lGI~~~--~v~~g~~l~~~~~~el~~~~~~~~vfAr----~~P 588 (867)
T TIGR01524 515 PPKESTKEAIAALFKNGINVKVLTGDNEIVTARICQEVGIDAN--DFLLGADIEELSDEELARELRKYHIFAR----LTP 588 (867)
T ss_pred CCchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCC--CeeecHhhhhCCHHHHHHHhhhCeEEEE----CCH
Confidence 6789999999999999999999999999999999999998521 22221 100 0000 00001000 011
Q ss_pred CcccccCCCCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccCCCCCCeeeecC-CCchhhhhhcCCCeeeEEEEeCC
Q 044617 143 HGCNLCPSNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRDCDFVMPRK-NYPLWDRICSNPMLIKAKVHEWS 221 (265)
Q Consensus 143 ~~~~~~~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 221 (265)
..|...++.+.++ | +.+.|+|||.||..+. +.++++++-+ |.... ++ ..+.... -+
T Consensus 589 ---------e~K~~iV~~lq~~-G---~vVam~GDGvNDapAL---k~AdVGIAmg~gtdvA---k~---aADiVLl-dd 645 (867)
T TIGR01524 589 ---------MQKSRIIGLLKKA-G---HTVGFLGDGINDAPAL---RKADVGISVDTAADIA---KE---ASDIILL-EK 645 (867)
T ss_pred ---------HHHHHHHHHHHhC-C---CEEEEECCCcccHHHH---HhCCEEEEeCCccHHH---HH---hCCEEEe-cC
Confidence 2388888877654 2 5788999999999888 4566666644 22222 21 2234332 26
Q ss_pred CHHHHHHHHH
Q 044617 222 SAEELKKILL 231 (265)
Q Consensus 222 ~~~el~~~l~ 231 (265)
++..|...++
T Consensus 646 ~~~~I~~ai~ 655 (867)
T TIGR01524 646 SLMVLEEGVI 655 (867)
T ss_pred ChHHHHHHHH
Confidence 7777766554
No 176
>PRK10517 magnesium-transporting ATPase MgtA; Provisional
Probab=98.06 E-value=2.2e-05 Score=76.54 Aligned_cols=133 Identities=17% Similarity=0.235 Sum_probs=83.1
Q ss_pred CCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCcccccceEEec-Cce-ecCC------CceEEeeccccccCC
Q 044617 71 PLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTN-PTY-VDEQ------GRLRILPYHDSTLSH 142 (265)
Q Consensus 71 ~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~~i~~~-~~~-~d~~------~~~~~~~~~~~~~kp 142 (265)
++.|++++.++.|++.|+++.++|+.+...+..+.+++|+.. +.+++. +.. .++. ....+... ..|
T Consensus 550 p~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~IA~~lGI~~--~~v~~G~el~~l~~~el~~~~~~~~VfAr----~sP 623 (902)
T PRK10517 550 PPKETTAPALKALKASGVTVKILTGDSELVAAKVCHEVGLDA--GEVLIGSDIETLSDDELANLAERTTLFAR----LTP 623 (902)
T ss_pred cchhhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCc--cCceeHHHHHhCCHHHHHHHHhhCcEEEE----cCH
Confidence 678999999999999999999999999999999999999852 122221 100 0000 00000000 011
Q ss_pred CcccccCCCCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccCCCCCCeeeecC-CCchhhhhhcCCCeeeEEEEeCC
Q 044617 143 HGCNLCPSNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRDCDFVMPRK-NYPLWDRICSNPMLIKAKVHEWS 221 (265)
Q Consensus 143 ~~~~~~~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 221 (265)
..|...++.+.++ | +.+.|+|||.||..+. ..++++++-+ |... .++ ..+.... -+
T Consensus 624 ---------e~K~~IV~~Lq~~-G---~vVam~GDGvNDaPAL---k~ADVGIAmg~gtdv---Ake---aADiVLl-dd 680 (902)
T PRK10517 624 ---------MHKERIVTLLKRE-G---HVVGFMGDGINDAPAL---RAADIGISVDGAVDI---ARE---AADIILL-EK 680 (902)
T ss_pred ---------HHHHHHHHHHHHC-C---CEEEEECCCcchHHHH---HhCCEEEEeCCcCHH---HHH---hCCEEEe-cC
Confidence 2388888877653 2 5688999999999888 4566666654 2222 221 2234332 26
Q ss_pred CHHHHHHHHHH
Q 044617 222 SAEELKKILLH 232 (265)
Q Consensus 222 ~~~el~~~l~~ 232 (265)
|+..|.+.++.
T Consensus 681 ~~~~I~~ai~~ 691 (902)
T PRK10517 681 SLMVLEEGVIE 691 (902)
T ss_pred ChHHHHHHHHH
Confidence 77776665543
No 177
>COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=98.05 E-value=5.9e-05 Score=59.92 Aligned_cols=44 Identities=25% Similarity=0.297 Sum_probs=30.0
Q ss_pred CchHHHHHHHHHhcC-CCCce-EEEEcCCCCCcccccCCCCCCeeeecC
Q 044617 152 LCKGFVLDHVCTSFG-CGKQR-FIYLGDGRGDFCPTLKLRDCDFVMPRK 198 (265)
Q Consensus 152 ~~K~~~i~~~~~~~g-i~~~~-~v~vGD~~~Di~~a~~~~~~~~~~~~~ 198 (265)
.+|..+.+.+++.+. ....+ ++.+|||.||+.+. ...+.+|.-.
T Consensus 190 ~gKg~Aa~~ll~~y~rl~~~r~t~~~GDg~nD~Pl~---ev~d~AfiV~ 235 (274)
T COG3769 190 AGKGQAANWLLETYRRLGGARTTLGLGDGPNDAPLL---EVMDYAFIVK 235 (274)
T ss_pred cCccHHHHHHHHHHHhcCceeEEEecCCCCCcccHH---Hhhhhheeec
Confidence 347777777777664 44445 89999999999888 3445455433
No 178
>TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522.
Probab=98.04 E-value=4.3e-05 Score=74.88 Aligned_cols=134 Identities=14% Similarity=0.130 Sum_probs=80.0
Q ss_pred CCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCcccccc----eEEecCceecCC---------CceEEeeccc
Q 044617 71 PLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFS----EIYTNPTYVDEQ---------GRLRILPYHD 137 (265)
Q Consensus 71 ~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~----~i~~~~~~~d~~---------~~~~~~~~~~ 137 (265)
++++++.+.|+.|++.|+++.++|+.....+..+.+..|+...-. ..++.. .++.- ....+...
T Consensus 537 plr~~v~e~I~~l~~aGI~v~miTGD~~~tA~~ia~~~gi~~~~~~v~~~~~~g~-~l~~~~~~~~~~~~~~~~v~ar-- 613 (917)
T TIGR01116 537 PPRPEVADAIEKCRTAGIRVIMITGDNKETAEAICRRIGIFSPDEDVTFKSFTGR-EFDEMGPAKQRAACRSAVLFSR-- 613 (917)
T ss_pred CCchhHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHcCCCCCCccccceeeeHH-HHhhCCHHHHHHhhhcCeEEEe--
Confidence 679999999999999999999999999999999999999853111 111110 00000 00000000
Q ss_pred cccCCCcccccCCCCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccCCCCCCeeeecCCCchhhhhhcCCCeeeEEE
Q 044617 138 STLSHHGCNLCPSNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRDCDFVMPRKNYPLWDRICSNPMLIKAKV 217 (265)
Q Consensus 138 ~~~kp~~~~~~~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (265)
..| ..|...++.+. +. .+.+.|+|||.||+.|.+ .++++++-+ .+. +..++ .++..+
T Consensus 614 --~~P---------~~K~~iV~~lq-~~---g~~va~iGDG~ND~~alk---~AdVGia~g-~g~-~~ak~---aAD~vl 670 (917)
T TIGR01116 614 --VEP---------SHKSELVELLQ-EQ---GEIVAMTGDGVNDAPALK---KADIGIAMG-SGT-EVAKE---ASDMVL 670 (917)
T ss_pred --cCH---------HHHHHHHHHHH-hc---CCeEEEecCCcchHHHHH---hCCeeEECC-CCc-HHHHH---hcCeEE
Confidence 001 12666666443 32 467889999999999995 455565543 221 21221 233444
Q ss_pred EeCCCHHHHHHHHH
Q 044617 218 HEWSSAEELKKILL 231 (265)
Q Consensus 218 ~~~~~~~el~~~l~ 231 (265)
.. +||..|.+.+.
T Consensus 671 ~d-d~f~~i~~~i~ 683 (917)
T TIGR01116 671 AD-DNFATIVAAVE 683 (917)
T ss_pred cc-CCHHHHHHHHH
Confidence 22 56888777654
No 179
>TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase. This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast.
Probab=98.03 E-value=3.7e-05 Score=73.76 Aligned_cols=131 Identities=16% Similarity=0.132 Sum_probs=80.9
Q ss_pred CCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCcccccceEEecCceecCCCc--------------eEEeecc
Q 044617 71 PLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTNPTYVDEQGR--------------LRILPYH 136 (265)
Q Consensus 71 ~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~--------------~~~~~~~ 136 (265)
++.|++++.++.|++.|+++.++|+.....+..+.+++|+.+. +++.+........ ..+...
T Consensus 442 p~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~IA~~lGI~~~---~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfAr- 517 (755)
T TIGR01647 442 PPRHDTKETIERARHLGVEVKMVTGDHLAIAKETARRLGLGTN---IYTADVLLKGDNRDDLPSGELGEMVEDADGFAE- 517 (755)
T ss_pred CChhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCC---CcCHHHhcCCcchhhCCHHHHHHHHHhCCEEEe-
Confidence 6789999999999999999999999999999999999998541 1111100000000 000000
Q ss_pred ccccCCCcccccCCCCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccCCCCCCeeeecC-CCchhhhhhcCCCeeeE
Q 044617 137 DSTLSHHGCNLCPSNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRDCDFVMPRK-NYPLWDRICSNPMLIKA 215 (265)
Q Consensus 137 ~~~~kp~~~~~~~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 215 (265)
..| ..|...++.+.++ .+.+.|+|||.||..+. ..++++++-+ |... .++ ..+.
T Consensus 518 ---~~P---------e~K~~iV~~lq~~----G~~VamvGDGvNDapAL---~~AdVGIAm~~gtdv---Ake---aADi 572 (755)
T TIGR01647 518 ---VFP---------EHKYEIVEILQKR----GHLVGMTGDGVNDAPAL---KKADVGIAVAGATDA---ARS---AADI 572 (755)
T ss_pred ---cCH---------HHHHHHHHHHHhc----CCEEEEEcCCcccHHHH---HhCCeeEEecCCcHH---HHH---hCCE
Confidence 011 2377888776543 25689999999999888 4466666543 2222 221 1233
Q ss_pred EEEeCCCHHHHHHHHH
Q 044617 216 KVHEWSSAEELKKILL 231 (265)
Q Consensus 216 ~~~~~~~~~el~~~l~ 231 (265)
... -+++..|...++
T Consensus 573 vLl-~d~l~~I~~ai~ 587 (755)
T TIGR01647 573 VLT-EPGLSVIVDAIL 587 (755)
T ss_pred EEE-cCChHHHHHHHH
Confidence 332 266766665544
No 180
>PF11019 DUF2608: Protein of unknown function (DUF2608); InterPro: IPR022565 This family is conserved in Bacteria. The function is not known.
Probab=98.03 E-value=7e-05 Score=62.24 Aligned_cols=124 Identities=15% Similarity=0.178 Sum_probs=76.7
Q ss_pred CCCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHH---HHHhcCcccccceEEecCceecCCCceEEeeccccccCCCcc-
Q 044617 70 CPLDSHVAAAIKSAHSLGCDLKIVSDANQFYIET---IMEHHGLLGCFSEIYTNPTYVDEQGRLRILPYHDSTLSHHGC- 145 (265)
Q Consensus 70 ~~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~---~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp~~~- 145 (265)
..+.+.+.++|+.++++|+++..+|.....+... .|+.+|++ |..-- +..++.+...............
T Consensus 80 ~lie~~~~~~i~~lq~~~~~v~alT~~~~~~~~~t~~~Lk~~gi~--fs~~~-----~~~~~~~~~~~~~~~~~~~~~~~ 152 (252)
T PF11019_consen 80 ELIESDVPNIINSLQNKGIPVIALTARGPNMEDWTLRELKSLGID--FSSSS-----FPEDGIISFPVFDSALSRAPSFY 152 (252)
T ss_pred EEcchhHHHHHHHHHHCCCcEEEEcCCChhhHHHHHHHHHHCCCC--ccccc-----cccCcceecccccCCCCCCceee
Confidence 4557899999999999999999999987665444 44556764 33221 1111111100000000000011
Q ss_pred --cccCCCCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccC-CCCCCeeeecCCC
Q 044617 146 --NLCPSNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLK-LRDCDFVMPRKNY 200 (265)
Q Consensus 146 --~~~~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~-~~~~~~~~~~~~~ 200 (265)
-++..|.+|+.++..++.+.|..|+.+|||.|+...+..+.+ +...++.|.+.-|
T Consensus 153 ~GIlft~~~~KG~~L~~fL~~~~~~pk~IIfIDD~~~nl~sv~~a~k~~~I~f~G~~Y 210 (252)
T PF11019_consen 153 DGILFTGGQDKGEVLKYFLDKINQSPKKIIFIDDNKENLKSVEKACKKSGIDFIGFHY 210 (252)
T ss_pred cCeEEeCCCccHHHHHHHHHHcCCCCCeEEEEeCCHHHHHHHHHHHhhCCCcEEEEEE
Confidence 134667889999999999999999999999999877754433 2334555554433
No 181
>COG2503 Predicted secreted acid phosphatase [General function prediction only]
Probab=97.99 E-value=6.4e-05 Score=60.57 Aligned_cols=123 Identities=18% Similarity=0.232 Sum_probs=77.1
Q ss_pred ceEEEEecCCCCCCCCch--HHHHHHhCchHHHHHHHccCChhHHHHHHHHHHHhCCCCHHHHHHHh--cCCCCChhHHH
Q 044617 3 DVVVVFDFDRTLIDDDSD--NWVVTQMGLTHLFNQLRSTLPWNSLMDRMMKELHSQGKTVEDIANCL--RQCPLDSHVAA 78 (265)
Q Consensus 3 ~k~iifD~DGTL~ds~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~g~~e 78 (265)
.++|+.|+|-|++|.... ..+... .+.+.+.+..++ ......||+.+
T Consensus 79 ~~aVvlDlDETvLdNs~Yqgy~v~nn-----------------------------k~f~pe~Wd~wV~a~~sk~vpGA~e 129 (274)
T COG2503 79 KKAVVLDLDETVLDNSAYQGYQVLNN-----------------------------KGFTPETWDKWVQAKKSKAVPGAVE 129 (274)
T ss_pred CceEEEecchHhhcCccccchhhhcC-----------------------------CCCCccchHHHHhhcccccCccHHH
Confidence 468999999999998541 111111 122223333333 24678899999
Q ss_pred HHHHHHHcCCcEEEEeCCCHHH----HHHHHHhcCcccccceEEecCceecCCCceEEeeccccccCCCcccccCCCCch
Q 044617 79 AIKSAHSLGCDLKIVSDANQFY----IETIMEHHGLLGCFSEIYTNPTYVDEQGRLRILPYHDSTLSHHGCNLCPSNLCK 154 (265)
Q Consensus 79 ~l~~l~~~g~~~~ivS~~~~~~----i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp~~~~~~~~~~~K 154 (265)
++.+..++|..++.+||+.... ...-+...|+...-..- ..+. .. ..+|
T Consensus 130 Fl~Yvn~~Gg~ifyiSNR~~~~~~~~T~~nLk~~g~~~~~~~~----~llk------------k~-----------~k~K 182 (274)
T COG2503 130 FLNYVNSNGGKIFYISNRDQENEKDGTIENLKSEGLPQVLESH----LLLK------------KD-----------KKSK 182 (274)
T ss_pred HHHHHHhcCcEEEEEeccchhcccchhHHHHHHcCcccccccc----eEEe------------eC-----------CCcH
Confidence 9999999999999999987664 33445667765331110 0000 01 1226
Q ss_pred HHHHHHHHHhcCCCCceEEEEcCCCCCcccc
Q 044617 155 GFVLDHVCTSFGCGKQRFIYLGDGRGDFCPT 185 (265)
Q Consensus 155 ~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a 185 (265)
....+.+.+.+ +-++.|||...|....
T Consensus 183 e~R~~~v~k~~----~iVm~vGDNl~DF~d~ 209 (274)
T COG2503 183 EVRRQAVEKDY----KIVMLVGDNLDDFGDN 209 (274)
T ss_pred HHHHHHHhhcc----ceeeEecCchhhhcch
Confidence 66666666644 5588999999888544
No 182
>TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others.
Probab=97.97 E-value=7e-05 Score=73.66 Aligned_cols=132 Identities=16% Similarity=0.144 Sum_probs=82.6
Q ss_pred CCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCcccccceEEecCceecCC---------CceEEeeccccccC
Q 044617 71 PLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTNPTYVDEQ---------GRLRILPYHDSTLS 141 (265)
Q Consensus 71 ~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~~i~~~~~~~d~~---------~~~~~~~~~~~~~k 141 (265)
++.|++++.++.|++.|+++.++|+.....+..+.+..|+...-..+++... ++.- .+..+... ..
T Consensus 579 plr~~~~~aI~~l~~aGI~v~miTGD~~~tA~~iA~~~GI~~~~~~vi~G~~-~~~l~~~el~~~i~~~~Vfar----~s 653 (941)
T TIGR01517 579 PLRPGVREAVQECQRAGITVRMVTGDNIDTAKAIARNCGILTFGGLAMEGKE-FRRLVYEEMDPILPKLRVLAR----SS 653 (941)
T ss_pred CCchhHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHcCCCCCCceEeeHHH-hhhCCHHHHHHHhccCeEEEE----CC
Confidence 6789999999999999999999999999999999999998532112222110 0000 00000000 01
Q ss_pred CCcccccCCCCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccCCCCCCeeeecC--CCchhhhhhcCCCeeeEEEEe
Q 044617 142 HHGCNLCPSNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRDCDFVMPRK--NYPLWDRICSNPMLIKAKVHE 219 (265)
Q Consensus 142 p~~~~~~~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 219 (265)
| ..|...++.+.++ .+.+.|+|||.||..|. +.++++++-+ |..... + .++..+.
T Consensus 654 P---------e~K~~iV~~lq~~----g~vVam~GDGvNDapAL---k~AdVGIAmg~~gtdvAk---~---aADivL~- 710 (941)
T TIGR01517 654 P---------LDKQLLVLMLKDM----GEVVAVTGDGTNDAPAL---KLADVGFSMGISGTEVAK---E---ASDIILL- 710 (941)
T ss_pred H---------HHHHHHHHHHHHC----CCEEEEECCCCchHHHH---HhCCcceecCCCccHHHH---H---hCCEEEe-
Confidence 1 2388888887654 24789999999999888 4466666543 333222 1 2234432
Q ss_pred CCCHHHHHHHH
Q 044617 220 WSSAEELKKIL 230 (265)
Q Consensus 220 ~~~~~el~~~l 230 (265)
-+++.-|...+
T Consensus 711 dd~f~~I~~~i 721 (941)
T TIGR01517 711 DDNFASIVRAV 721 (941)
T ss_pred cCCHHHHHHHH
Confidence 25777776665
No 183
>PF08235 LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 This domain is found in Saccharomyces cerevisiae (Baker's yeast) protein SMP2, proteins with an N-terminal lipin domain (IPR007651 from INTERPRO) and phosphatidylinositol transfer proteins []. SMP2 is involved in plasmid maintenance and respiration []. Lipin proteins are involved in adipose tissue development and insulin resistance [].
Probab=97.93 E-value=6.1e-05 Score=57.44 Aligned_cols=106 Identities=10% Similarity=0.012 Sum_probs=60.0
Q ss_pred CCChhHHHHHHHHHHcCCcEEEEeCCCHHH---HHHHHHhc-----CcccccceEEecCceecCCCceEEeeccccccCC
Q 044617 71 PLDSHVAAAIKSAHSLGCDLKIVSDANQFY---IETIMEHH-----GLLGCFSEIYTNPTYVDEQGRLRILPYHDSTLSH 142 (265)
Q Consensus 71 ~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~---i~~~l~~~-----gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp 142 (265)
..++|+.+++...+++||++.-+|+++.-. .+..+... ++..= .++.+.. +.+.........++|
T Consensus 27 ~~h~g~~~l~~~i~~~GY~ilYlTaRp~~qa~~Tr~~L~~~~q~~~~lP~G--pv~~sP~-----~l~~al~rEvi~~~p 99 (157)
T PF08235_consen 27 WTHPGAAELYRKIADNGYKILYLTARPIGQANRTRSWLAQHQQQGHNLPDG--PVLLSPD-----SLFSALHREVISKDP 99 (157)
T ss_pred hhhhcHHHHHHHHHHCCeEEEEECcCcHHHHHHHHHHHHHHHhCCccCCCC--CEEECCc-----chhhhhhccccccCh
Confidence 568999999999999999999999986443 33444443 33211 2333210 000000000001112
Q ss_pred CcccccCCCCchHHHHHHHHHhcCCCCc-eEEEEcCCCCCcccccCCCCC
Q 044617 143 HGCNLCPSNLCKGFVLDHVCTSFGCGKQ-RFIYLGDGRGDFCPTLKLRDC 191 (265)
Q Consensus 143 ~~~~~~~~~~~K~~~i~~~~~~~gi~~~-~~v~vGD~~~Di~~a~~~~~~ 191 (265)
..-|...++.+...+.-... =...+|.+.+|+.+-+++|..
T Consensus 100 --------~~fK~~~L~~l~~~f~~~~~pf~agfGN~~tDv~aY~~vGip 141 (157)
T PF08235_consen 100 --------EEFKIACLRDLRALFPPDGNPFYAGFGNRSTDVIAYKAVGIP 141 (157)
T ss_pred --------HHHHHHHHHHHHHhcCCCCCeEEEecCCcHHHHHHHHHcCCC
Confidence 12267777777776541222 245789999999887665653
No 184
>TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type. The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump.
Probab=97.88 E-value=0.0001 Score=73.06 Aligned_cols=140 Identities=13% Similarity=0.119 Sum_probs=81.9
Q ss_pred CCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCccccc----------ceEEecCceecCCCceEEeecccccc
Q 044617 71 PLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCF----------SEIYTNPTYVDEQGRLRILPYHDSTL 140 (265)
Q Consensus 71 ~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f----------~~i~~~~~~~d~~~~~~~~~~~~~~~ 140 (265)
++.|++.+.|+.|++.|+++.++|+.....+..+.+..|+.... ..+++.. .++.-..- .... .
T Consensus 646 p~r~~v~~aI~~l~~aGIkv~MiTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~vitG~-~l~~l~~~---~l~~-~- 719 (1053)
T TIGR01523 646 PPRNESAGAVEKCHQAGINVHMLTGDFPETAKAIAQEVGIIPPNFIHDRDEIMDSMVMTGS-QFDALSDE---EVDD-L- 719 (1053)
T ss_pred CCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCccccccccccccceeeehH-HhhhcCHH---HHHH-H-
Confidence 77899999999999999999999999999999999999984310 0111110 00000000 0000 0
Q ss_pred CCCccc-cc-CCCCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccCCCCCCeeeec--CCCchhhhhhcCCCeeeEE
Q 044617 141 SHHGCN-LC-PSNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRDCDFVMPR--KNYPLWDRICSNPMLIKAK 216 (265)
Q Consensus 141 kp~~~~-~~-~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~ 216 (265)
...+. .+ .....|...++.+.++ .+.+.|+|||.||..|. ..++++++- .|....+ + ..+..
T Consensus 720 -~~~~~V~ar~sP~~K~~iV~~lq~~----g~~Vam~GDGvNDapaL---k~AdVGIAmg~~gt~vak---~---aADiv 785 (1053)
T TIGR01523 720 -KALCLVIARCAPQTKVKMIEALHRR----KAFCAMTGDGVNDSPSL---KMANVGIAMGINGSDVAK---D---ASDIV 785 (1053)
T ss_pred -hhcCeEEEecCHHHHHHHHHHHHhc----CCeeEEeCCCcchHHHH---HhCCccEecCCCccHHHH---H---hcCEE
Confidence 00000 00 0012377777777654 25688999999999888 456666653 2333222 1 22343
Q ss_pred EEeCCCHHHHHHHHH
Q 044617 217 VHEWSSAEELKKILL 231 (265)
Q Consensus 217 ~~~~~~~~el~~~l~ 231 (265)
+. -++|..|...+.
T Consensus 786 l~-dd~f~~I~~~i~ 799 (1053)
T TIGR01523 786 LS-DDNFASILNAIE 799 (1053)
T ss_pred Ee-cCCHHHHHHHHH
Confidence 32 256777766553
No 185
>COG3700 AphA Acid phosphatase (class B) [General function prediction only]
Probab=97.87 E-value=1.3e-05 Score=61.46 Aligned_cols=94 Identities=13% Similarity=0.083 Sum_probs=57.4
Q ss_pred ChhHHHHHHHHHHcCCcEEEEeCCCHHHHHH----HHHhcCcccccceEEecCceecCCCceEEeeccccccCCCccccc
Q 044617 73 DSHVAAAIKSAHSLGCDLKIVSDANQFYIET----IMEHHGLLGCFSEIYTNPTYVDEQGRLRILPYHDSTLSHHGCNLC 148 (265)
Q Consensus 73 ~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~----~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp~~~~~~ 148 (265)
.+-++++|.-.+++|-.++.+|++..-.++. +.+.+.+......++.. | + .||.
T Consensus 116 KevA~qLI~MHq~RGD~i~FvTGRt~gk~d~vsk~Lak~F~i~~m~pv~f~G----d---k----------~k~~----- 173 (237)
T COG3700 116 KEVARQLIDMHQRRGDAIYFVTGRTPGKTDTVSKTLAKNFHITNMNPVIFAG----D---K----------PKPG----- 173 (237)
T ss_pred HHHHHHHHHHHHhcCCeEEEEecCCCCcccccchhHHhhcccCCCcceeecc----C---C----------CCcc-----
Confidence 4557778899999999999999876543333 22345554332222221 0 0 0111
Q ss_pred CCCCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccCCCCCCeeeecC
Q 044617 149 PSNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRDCDFVMPRK 198 (265)
Q Consensus 149 ~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~~~~~~~~~ 198 (265)
...|... ++.. .--+++|||.+|+-+|+.+|..++-+.+.
T Consensus 174 --qy~Kt~~----i~~~----~~~IhYGDSD~Di~AAkeaG~RgIRilRA 213 (237)
T COG3700 174 --QYTKTQW----IQDK----NIRIHYGDSDNDITAAKEAGARGIRILRA 213 (237)
T ss_pred --cccccHH----HHhc----CceEEecCCchhhhHHHhcCccceeEEec
Confidence 1123322 2222 23678899999999999999988877764
No 186
>TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5. The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog.
Probab=97.82 E-value=7.6e-05 Score=64.49 Aligned_cols=40 Identities=10% Similarity=0.037 Sum_probs=31.5
Q ss_pred CChhHHHHHHHHHHc----CCcEEEEeCCC---HH-HHHHHHHhcCcc
Q 044617 72 LDSHVAAAIKSAHSL----GCDLKIVSDAN---QF-YIETIMEHHGLL 111 (265)
Q Consensus 72 ~~~g~~e~l~~l~~~----g~~~~ivS~~~---~~-~i~~~l~~~gl~ 111 (265)
+.|++.++++.|+.+ |+++.++||.. .. .++.+.+.+|+.
T Consensus 17 ~i~ga~eal~~L~~~~~~~g~~~~flTNn~g~s~~~~~~~l~~~lG~~ 64 (321)
T TIGR01456 17 PIAGASDALRRLNRNQGQLKIPYIFLTNGGGFSERARAEEISSLLGVD 64 (321)
T ss_pred ccHHHHHHHHHHhccccccCCCEEEEecCCCCCHHHHHHHHHHHcCCC
Confidence 489999999999998 99999999885 33 344444778864
No 187
>PLN02499 glycerol-3-phosphate acyltransferase
Probab=97.72 E-value=0.0015 Score=58.64 Aligned_cols=158 Identities=16% Similarity=0.133 Sum_probs=88.5
Q ss_pred ceEEEEecCCCCCCCCc-hHHHH----HHhCchHHHHHHHccC---------C-hhHHHHHHHHHHHhCCCCHHHHHHHh
Q 044617 3 DVVVVFDFDRTLIDDDS-DNWVV----TQMGLTHLFNQLRSTL---------P-WNSLMDRMMKELHSQGKTVEDIANCL 67 (265)
Q Consensus 3 ~k~iifD~DGTL~ds~~-~~~~~----~~~~~~~~~~~~~~~~---------~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 67 (265)
...++||+||||+.|.+ ..+.+ +..|..... .++... . -....+. +....-.|...+++....
T Consensus 8 ~~~~~fD~DGTLlrs~ssFpyFmlva~eagG~~R~~-~LL~l~P~l~ll~~~~~~~~~lK~-mi~v~f~Gl~~~die~va 85 (498)
T PLN02499 8 SYSVVSELEGTLLKDADPFSYFMLVAFEASGLIRFA-LLLFLWPIIRLLDMLGMGDAALKL-MIFVATAGVHESEIESVA 85 (498)
T ss_pred cceEEEecccceecCCCccHHHHHHHHHhccHHHHH-HHHHHhHHHHHHHhcCCchHHHHH-HHHHHhCCCCHHHHHHHH
Confidence 46899999999999544 22222 233333221 111110 1 1111111 333334566666664322
Q ss_pred c----C---CCCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHh-cCcccccceEEecCceecCCCceEEeeccccc
Q 044617 68 R----Q---CPLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEH-HGLLGCFSEIYTNPTYVDEQGRLRILPYHDST 139 (265)
Q Consensus 68 ~----~---~~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~-~gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~ 139 (265)
. . -.+.++ .++..++.| +.+++|..+..+++..+++ +| ++.|++.+..+.+.|.+++.-..
T Consensus 86 Ravlpkf~~~dv~~e---~~~~~~~~g-~~vVVTAsPrvmVEpFake~LG----~D~VvGTEL~v~~~G~~TG~~~G--- 154 (498)
T PLN02499 86 RAVLPKFYMDDVDME---AWKVFSSCD-KRVVVTRMPRVMVERFAKEHLR----ADEVIGSELVVNRFGFATGFIRG--- 154 (498)
T ss_pred HHHhhHHHHhhCCHH---HHHHHHcCC-eEEEEeCCHHHHHHHHHHHhcC----CceEEeeeEEEeeccEEEEEEec---
Confidence 1 1 123344 455567777 9999999999999999998 88 45888888777755666642111
Q ss_pred cCCCcccccCCCCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccc
Q 044617 140 LSHHGCNLCPSNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPT 185 (265)
Q Consensus 140 ~kp~~~~~~~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a 185 (265)
.+ +.....+++.+.+| +....+=+||+..|-.-+
T Consensus 155 ----------~n-~~ek~~~rl~~~~g-~~~~~vg~~~~~~~~~f~ 188 (498)
T PLN02499 155 ----------TD-VDQSVANRVANLFV-DERPQLGLGRISASSSFL 188 (498)
T ss_pred ----------Cc-cHHHHHHHHHHHhC-ccCceecccCCcccchhh
Confidence 01 11222445555555 223477788888777655
No 188
>TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit. Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps.
Probab=97.72 E-value=0.00036 Score=69.09 Aligned_cols=41 Identities=20% Similarity=0.348 Sum_probs=38.7
Q ss_pred CCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCcc
Q 044617 71 PLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLL 111 (265)
Q Consensus 71 ~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~ 111 (265)
++.|++++.|+.+++.|+++.++|+.....+..+.+.+|+.
T Consensus 568 plr~~v~~aI~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~ 608 (997)
T TIGR01106 568 PPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKGVGII 608 (997)
T ss_pred CChHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCC
Confidence 67899999999999999999999999999999999999983
No 189
>KOG0202 consensus Ca2+ transporting ATPase [Inorganic ion transport and metabolism]
Probab=97.72 E-value=0.0005 Score=64.62 Aligned_cols=136 Identities=15% Similarity=0.117 Sum_probs=85.3
Q ss_pred CCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCcccccce----EEecCceecC---------CCceEEeeccc
Q 044617 71 PLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSE----IYTNPTYVDE---------QGRLRILPYHD 137 (265)
Q Consensus 71 ~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~~----i~~~~~~~d~---------~~~~~~~~~~~ 137 (265)
++.+++.+.++.+++.|+++..+|+.....+..+.++.|+...-+. .++ ...+|+ -....++.-
T Consensus 584 PPR~ev~~ai~~c~~aGIrV~mITGD~~~TA~AI~r~iGi~~~~ed~~~~~~T-G~efD~ls~~~~~~~~~~~~vFaR-- 660 (972)
T KOG0202|consen 584 PPRPEVADAIELCRQAGIRVIMITGDNKETAEAIAREIGIFSEDEDVSSMALT-GSEFDDLSDEELDDAVRRVLVFAR-- 660 (972)
T ss_pred CCchhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHhCCCcCCccccccccc-hhhhhcCCHHHHHHHhhcceEEEe--
Confidence 6789999999999999999999999999999999999997544332 111 111221 000001000
Q ss_pred cccCCCcccccCCCCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccCCCCCCeeeecCCCchhhhhhcCCCeeeEEE
Q 044617 138 STLSHHGCNLCPSNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRDCDFVMPRKNYPLWDRICSNPMLIKAKV 217 (265)
Q Consensus 138 ~~~kp~~~~~~~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (265)
..| ..|..+++.+.+.- +=+.|-|||.||-.+.|. ...++++...|....+.. .+..
T Consensus 661 --~~P---------~HK~kIVeaLq~~g----eivAMTGDGVNDApALK~-AdIGIAMG~~GTdVaKeA------sDMV- 717 (972)
T KOG0202|consen 661 --AEP---------QHKLKIVEALQSRG----EVVAMTGDGVNDAPALKK-ADIGIAMGISGTDVAKEA------SDMV- 717 (972)
T ss_pred --cCc---------hhHHHHHHHHHhcC----CEEEecCCCccchhhhhh-cccceeecCCccHhhHhh------hhcE-
Confidence 001 22777777666542 457799999999988854 223344444455544422 2333
Q ss_pred EeCCCHHHHHHHHHH
Q 044617 218 HEWSSAEELKKILLH 232 (265)
Q Consensus 218 ~~~~~~~el~~~l~~ 232 (265)
..-+||+-|...+++
T Consensus 718 L~DDnFstIvaAVEE 732 (972)
T KOG0202|consen 718 LADDNFSTIVAAVEE 732 (972)
T ss_pred EecCcHHHHHHHHHH
Confidence 334888887776654
No 190
>COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=97.71 E-value=0.00026 Score=69.35 Aligned_cols=105 Identities=16% Similarity=0.172 Sum_probs=73.5
Q ss_pred CCCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCcccccc--eEE-ecCce-ecC---------CCc-eEEeec
Q 044617 70 CPLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFS--EIY-TNPTY-VDE---------QGR-LRILPY 135 (265)
Q Consensus 70 ~~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~--~i~-~~~~~-~d~---------~~~-~~~~~~ 135 (265)
-++.+++++.++.|++.|+++..+|+.+...+..+.++.|+..--. .++ +.+.. ..+ ... ..+.|.
T Consensus 546 Dppr~~v~~aI~~l~~AGI~v~MiTGD~~~TA~aIa~~~Gi~~~~~~~~vi~G~el~~l~~~el~~~~~~~~VfARvsP~ 625 (917)
T COG0474 546 DPPREDVKEAIEELREAGIKVWMITGDHVETAIAIAKECGIEAEAESALVIDGAELDALSDEELAELVEELSVFARVSPE 625 (917)
T ss_pred CCCCccHHHHHHHHHHCCCcEEEECCCCHHHHHHHHHHcCCCCCCCceeEeehHHhhhcCHHHHHHHhhhCcEEEEcCHH
Confidence 4789999999999999999999999999999999999999754422 122 22110 000 000 001122
Q ss_pred cccccCCCcccccCCCCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccCCCCCCeeeecC
Q 044617 136 HDSTLSHHGCNLCPSNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRDCDFVMPRK 198 (265)
Q Consensus 136 ~~~~~kp~~~~~~~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~~~~~~~~~ 198 (265)
.|..+++.+.+. | +-+.|.|||.||..|. +.++++++-+
T Consensus 626 -----------------qK~~IV~~lq~~-g---~vVamtGDGvNDapAL---k~ADVGIamg 664 (917)
T COG0474 626 -----------------QKARIVEALQKS-G---HVVAMTGDGVNDAPAL---KAADVGIAMG 664 (917)
T ss_pred -----------------HHHHHHHHHHhC-C---CEEEEeCCCchhHHHH---HhcCccEEec
Confidence 288888877776 3 5788999999999888 4566666544
No 191
>KOG3128 consensus Uncharacterized conserved protein [Function unknown]
Probab=97.60 E-value=7.4e-05 Score=60.50 Aligned_cols=119 Identities=21% Similarity=0.166 Sum_probs=80.1
Q ss_pred CCCHHHHHHHhc--CCCCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCcccccceEEecCceecCCCceEEee
Q 044617 57 GKTVEDIANCLR--QCPLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRILP 134 (265)
Q Consensus 57 ~~~~~~~~~~~~--~~~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~~ 134 (265)
+.+...+.+.+. .+.+.+|..++++.|+++++++.|.|.+.-..++.++++......+..+.++-..++.+|.+..
T Consensus 122 ~f~k~~I~~~Va~s~i~lReg~~~ff~~L~~~~IP~~iFSAGigdiiEev~~q~~~~~pn~k~vSN~~~F~edg~l~g-- 199 (298)
T KOG3128|consen 122 GFSKNAIDDIVAESNIALREGYEEFFEALQAHEIPLLIFSAGIGDIIEEVTRQKLVLHPNVKFVSNYMDFDEDGNLCG-- 199 (298)
T ss_pred CcCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCceEEEecchHHHHHHHHHHHhccCccHHhhhhhhhhcccchhhh--
Confidence 445666666554 4567899999999999999999999999999999998876554556667777666665554331
Q ss_pred ccccccCCCcccccCCCCch-HHHHHHHHHhcC--CCCceEEEEcCCCCCccccc
Q 044617 135 YHDSTLSHHGCNLCPSNLCK-GFVLDHVCTSFG--CGKQRFIYLGDGRGDFCPTL 186 (265)
Q Consensus 135 ~~~~~~kp~~~~~~~~~~~K-~~~i~~~~~~~g--i~~~~~v~vGD~~~Di~~a~ 186 (265)
+.+|-... .+| ...++...+.+. -+..++++-||+..|+.||.
T Consensus 200 ----F~~~Liht-----fnkn~~v~~~~s~yf~~~~~~~nVillGdsigdl~ma~ 245 (298)
T KOG3128|consen 200 ----FSQPLIHT-----FNKNSSVLQNESEYFHQLAGRVNVILLGDSIGDLHMAD 245 (298)
T ss_pred ----hhHHHHHH-----HccchHHHHhhhHHHhhccCCceEEEeccccccchhhc
Confidence 11110000 012 233444344443 34578999999999999984
No 192
>TIGR02245 HAD_IIID1 HAD-superfamily subfamily IIID hydrolase, TIGR02245. This family of sequences appears to belong to the Haloacid Dehalogenase (HAD) superfamily of enzymes by virtue of the presence of three catalytic domains, in this case: LLVLD(ILV)D(YH)T, I(VMG)IWS, and (DN)(VC)K(PA)Lx{15-17}T(IL)(MH)(FV)DD(IL)(GRS)(RK)N. Since this family has no large "cap" domain between motifs 1 and 2 or between 2 and 3, it is formally a "class III" HAD.
Probab=97.59 E-value=0.00038 Score=55.37 Aligned_cols=40 Identities=25% Similarity=0.273 Sum_probs=36.3
Q ss_pred CCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCcc
Q 044617 71 PLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLL 111 (265)
Q Consensus 71 ~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~ 111 (265)
...|++.++|+.+.+ .+.++|-|++...++..++..+++.
T Consensus 45 ~kRP~l~eFL~~~~~-~feIvVwTAa~~~ya~~~l~~l~~~ 84 (195)
T TIGR02245 45 LMRPYLHEFLTSAYE-DYDIVIWSATSMKWIEIKMTELGVL 84 (195)
T ss_pred EeCCCHHHHHHHHHh-CCEEEEEecCCHHHHHHHHHHhccc
Confidence 458999999999999 5999999999999999999998763
No 193
>PF06941 NT5C: 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C); InterPro: IPR010708 This family consists of several 5' nucleotidase, deoxy (Pyrimidine), and cytosolic type C (NT5C) proteins. 5'(3')-deoxyribonucleotidase is a ubiquitous enzyme in mammalian cells whose physiological function is not known [].; GO: 0016791 phosphatase activity; PDB: 1Z4M_A 1Q92_A 1Q91_A 1Z4J_A 1Z4I_A 1Z4Q_A 1Z4K_A 2JAW_A 1MH9_A 1Z4L_A ....
Probab=97.56 E-value=0.00014 Score=57.94 Aligned_cols=32 Identities=16% Similarity=0.249 Sum_probs=23.2
Q ss_pred hcCCCCChhHHHHHHHHHHcCCcEEEEeCCCH
Q 044617 67 LRQCPLDSHVAAAIKSAHSLGCDLKIVSDANQ 98 (265)
Q Consensus 67 ~~~~~~~~g~~e~l~~l~~~g~~~~ivS~~~~ 98 (265)
....++.||+.++|+.|.+.|+.++++|++..
T Consensus 69 f~~l~p~~gA~e~l~~L~~~g~~~~~Itar~~ 100 (191)
T PF06941_consen 69 FSNLPPIPGAVEALKKLRDKGHEIVIITARPP 100 (191)
T ss_dssp TTT--B-TTHHHHHHHHHTSTTEEEEEEE-SS
T ss_pred hcCCCccHHHHHHHHHHHHcCCcEEEEEecCc
Confidence 34678899999999999999987877776643
No 194
>COG3882 FkbH Predicted enzyme involved in methoxymalonyl-ACP biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=97.46 E-value=0.0004 Score=61.39 Aligned_cols=92 Identities=11% Similarity=0.142 Sum_probs=66.7
Q ss_pred CCCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCcccccceEEecCceecCCCceEEeeccccccCCCcccccC
Q 044617 70 CPLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRILPYHDSTLSHHGCNLCP 149 (265)
Q Consensus 70 ~~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp~~~~~~~ 149 (265)
...+....++|..|+.+|.-++|+|-....-+..+.+.+.- .++.-+. +. ... ..+.
T Consensus 254 G~~fk~fQ~~Ik~l~kqGVlLav~SKN~~~da~evF~khp~-----MiLkeed-fa---~~~-iNW~------------- 310 (574)
T COG3882 254 GEAFKTFQNFIKGLKKQGVLLAVCSKNTEKDAKEVFRKHPD-----MILKEED-FA---VFQ-INWD------------- 310 (574)
T ss_pred chhHHHHHHHHHHHHhccEEEEEecCCchhhHHHHHhhCCC-----eEeeHhh-hh---hhe-ecCC-------------
Confidence 35566778899999999999999998888888888776542 2332110 00 000 0122
Q ss_pred CCCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccC
Q 044617 150 SNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLK 187 (265)
Q Consensus 150 ~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~ 187 (265)
+|.+-++.+++++++..+-.+|+.|++-..+-.++
T Consensus 311 ---~K~eNirkIAkklNlg~dSmvFiDD~p~ErE~vk~ 345 (574)
T COG3882 311 ---PKAENIRKIAKKLNLGLDSMVFIDDNPAERELVKR 345 (574)
T ss_pred ---cchhhHHHHHHHhCCCccceEEecCCHHHHHHHHh
Confidence 29999999999999999999999999877766654
No 195
>PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=97.44 E-value=0.0081 Score=58.19 Aligned_cols=39 Identities=10% Similarity=0.103 Sum_probs=31.3
Q ss_pred CCCChhHHHHHHHHHHc-CCcEEEEeCCCHHHHHHHHHhc
Q 044617 70 CPLDSHVAAAIKSAHSL-GCDLKIVSDANQFYIETIMEHH 108 (265)
Q Consensus 70 ~~~~~g~~e~l~~l~~~-g~~~~ivS~~~~~~i~~~l~~~ 108 (265)
..+.|++.++|..|.+. +..++|+|+.....++..+...
T Consensus 531 a~p~~~l~~~L~~L~~d~~~~V~IvSGR~~~~L~~~~~~~ 570 (797)
T PLN03063 531 LGLHPELKETLKALCSDPKTTVVVLSRSGKDILDKNFGEY 570 (797)
T ss_pred CCCCHHHHHHHHHHHcCCCCEEEEEeCCCHHHHHHHhCCC
Confidence 45678899999888775 5689999999988888887653
No 196
>COG1877 OtsB Trehalose-6-phosphatase [Carbohydrate transport and metabolism]
Probab=97.35 E-value=0.0028 Score=52.87 Aligned_cols=41 Identities=17% Similarity=0.219 Sum_probs=33.6
Q ss_pred CCCCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccCCC
Q 044617 149 PSNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLR 189 (265)
Q Consensus 149 ~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~ 189 (265)
|.+.+|+.++++++++......-+++.||-..|-.+-..+.
T Consensus 178 p~~~~KG~a~~~i~~~~~~~~~~~~~aGDD~TDE~~F~~v~ 218 (266)
T COG1877 178 PPGVSKGAAIKYIMDELPFDGRFPIFAGDDLTDEDAFAAVN 218 (266)
T ss_pred eCCcchHHHHHHHHhcCCCCCCcceecCCCCccHHHHHhhc
Confidence 67888999999999998766556999999999987765434
No 197
>TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5. The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog.
Probab=97.32 E-value=0.00046 Score=59.62 Aligned_cols=75 Identities=11% Similarity=0.040 Sum_probs=50.3
Q ss_pred CCchHHHHHHHHHhc--------CC-----CCceEEEEcCCC-CCcccccCCCCCCeeeecCCCchhhhhhcCCCeeeEE
Q 044617 151 NLCKGFVLDHVCTSF--------GC-----GKQRFIYLGDGR-GDFCPTLKLRDCDFVMPRKNYPLWDRICSNPMLIKAK 216 (265)
Q Consensus 151 ~~~K~~~i~~~~~~~--------gi-----~~~~~v~vGD~~-~Di~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (265)
|...+.+++.+++.+ ++ ++++++||||+. +|+.+|+++|+.++.+..+.+...+.. ....++..
T Consensus 232 GKP~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~mIGD~~~tDI~ga~~~G~~silV~tG~~~~~~~~--~~~~p~~v 309 (321)
T TIGR01456 232 GKPTKLTYDFAEDVLIDWEKRLSGTKPSTSPFHALYMVGDNPASDIIGAQNYGWFSCLVKTGVYNGGDDL--KECKPTLI 309 (321)
T ss_pred CCCChHHHHHHHHHHHHHHhhhccccccCCChheEEEEcCChhhhhhhHHhCCceEEEecccccCCCCCC--CCCCCCEE
Confidence 333678888877766 33 457999999997 999999998888777765434332211 11123445
Q ss_pred EEeCCCHHHHHHHH
Q 044617 217 VHEWSSAEELKKIL 230 (265)
Q Consensus 217 ~~~~~~~~el~~~l 230 (265)
+ +++.|+...|
T Consensus 310 v---~~l~e~~~~i 320 (321)
T TIGR01456 310 V---NDVFDAVTKI 320 (321)
T ss_pred E---CCHHHHHHHh
Confidence 5 8888887764
No 198
>PF05761 5_nucleotid: 5' nucleotidase family; InterPro: IPR008380 This family includes a 5'-nucleotidase, 3.1.3.5 from EC, specific for purines (IMP and GMP) []. These enzymes are members of the Haloacid Dehalogenase (HAD) superfamily. HAD members are recognised by three short motifs {hhhhDxDx(T/V)}, {hhhh(T/S)}, and either {hhhh(D/E)(D/E)x(3-4)(G/N)} or {hhhh(G/N)(D/E)x(3-4)(D/E)} (where "h" stands for a hydrophobic residue). Crystal structures of many HAD enzymes has verified PSI-PRED predictions of secondary structural elements which show each of the "hhhh" sequences of the motifs as part of beta sheets. This subfamily of enzymes is part of "Subfamily I" of the HAD superfamily by virtue of a "cap" domain in between motifs 1 and 2. This subfamily's cap domain has a different predicted secondary structure than all other known HAD enzymes and thus has been designated "subfamily IG", the domain appears to consist of a mixed alpha/beta fold.; PDB: 2BDE_A 2XCW_A 2XCX_A 2XCV_A 2XJB_A 2JCM_A 2XJE_A 2J2C_A 2XJF_A 2XJD_A ....
Probab=97.29 E-value=0.00065 Score=60.93 Aligned_cols=124 Identities=17% Similarity=0.206 Sum_probs=68.7
Q ss_pred CChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhc---------CcccccceEEecC---ceecCCCceEEeeccccc
Q 044617 72 LDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHH---------GLLGCFSEIYTNP---TYVDEQGRLRILPYHDST 139 (265)
Q Consensus 72 ~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~---------gl~~~f~~i~~~~---~~~d~~~~~~~~~~~~~~ 139 (265)
..|....+|+.|++.|.+++++||+.-.++..++..+ .+.++||.|+... ..+.+ +.. ........
T Consensus 184 k~~~l~~~L~~lr~~GKklFLiTNS~~~yt~~~M~yl~g~~~~~~~dW~dlFDvVIv~A~KP~FF~~-~~p-fr~vd~~~ 261 (448)
T PF05761_consen 184 KDPKLPPWLERLRSAGKKLFLITNSPFDYTNAVMSYLLGPFLGEDPDWRDLFDVVIVDARKPGFFTE-GRP-FREVDTET 261 (448)
T ss_dssp --CHHHHHHHHHHCCT-EEEEE-SS-HHHHHHHHHHHCGCCSSTTT-GGGCECEEEES--CCHHHCT-----EEEEETTT
T ss_pred CCchHHHHHHHHHhcCceEEEecCCCCchhhhhhhhccCCCCCCCCChhhheeEEEEcCCCCcccCC-CCc-eEEEECCC
Confidence 3678999999999999999999999999999999864 4677899888642 11211 110 00000001
Q ss_pred cCCCccc-ccCCC---CchHHHHHHHHHhcCCCCceEEEEcCCC-CCcccccCC-CCCCeeeec
Q 044617 140 LSHHGCN-LCPSN---LCKGFVLDHVCTSFGCGKQRFIYLGDGR-GDFCPTLKL-RDCDFVMPR 197 (265)
Q Consensus 140 ~kp~~~~-~~~~~---~~K~~~i~~~~~~~gi~~~~~v~vGD~~-~Di~~a~~~-~~~~~~~~~ 197 (265)
.+..+.. ..+.. +=...-+..+.+-+|....+++||||+. .|+..+++. |+.+.+++.
T Consensus 262 g~l~~~~~~~~l~~g~vY~gGn~~~l~~ll~~~g~~VLY~GDhi~~Di~~~k~~~gWrT~~Ii~ 325 (448)
T PF05761_consen 262 GKLKWGKYVGPLEKGKVYSGGNWDQLHKLLGWRGKEVLYFGDHIYGDILKSKKRHGWRTAAIIP 325 (448)
T ss_dssp SSEECS---SS--TC-EEEE--HHHHHHHCT--GGGEEEEESSTTTTHHHHHHHH-SEEEEE-T
T ss_pred CccccccccccccCCCEeecCCHHHHHHHHccCCCeEEEECCchhhhhhhhccccceEEEEEeh
Confidence 1111100 00001 1123445666677777788999999995 999766554 666666663
No 199
>PF02358 Trehalose_PPase: Trehalose-phosphatase; InterPro: IPR003337 Trehalose-phosphatases 3.1.3.12 from EC catalyse the de-phosphorylation of trehalose-6-phosphate to trehalose and orthophosphate. Trehalose is a common disaccharide of bacteria, fungi and invertebrates that appears to play a major role in desiccation tolerance. A pathway for trehalose biosynthesis may also exist in plants []. The trehalose-phosphatase signature is found in the C terminus of trehalose-6-phosphate synthase 2.4.1.15 from EC adjacent to the trehalose-6-phosphate synthase domain (see IPR001830 from INTERPRO). It would appear that the two equivalent genes in the Escherichia coli otsBA operon: otsA, the trehalose-6-phosphate synthase and otsB, trehalose-phosphatase (this family) have undergone gene fusion in most eukaryotes [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1U02_A.
Probab=97.23 E-value=0.00088 Score=55.19 Aligned_cols=45 Identities=22% Similarity=0.344 Sum_probs=30.8
Q ss_pred ccCCCCchHHHHHHHHHhcCCC---CceEEEEcCCCCCcccccCCCCC
Q 044617 147 LCPSNLCKGFVLDHVCTSFGCG---KQRFIYLGDGRGDFCPTLKLRDC 191 (265)
Q Consensus 147 ~~~~~~~K~~~i~~~~~~~gi~---~~~~v~vGD~~~Di~~a~~~~~~ 191 (265)
..+.+.+|+.+++.++++++.. +.-++|+||..+|-.+-..+...
T Consensus 159 vrp~~~~KG~av~~ll~~~~~~~~~~~~~l~~GDD~tDE~~f~~~~~~ 206 (235)
T PF02358_consen 159 VRPPGVNKGSAVRRLLEELPFAGPKPDFVLYIGDDRTDEDAFRALREL 206 (235)
T ss_dssp EE-TT--HHHHHHHHHTTS---------EEEEESSHHHHHHHHTTTTS
T ss_pred EEeCCCChHHHHHHHHHhcCccccccceeEEecCCCCCHHHHHHHHhc
Confidence 3477888999999999999765 66799999999999887665554
No 200
>TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase. This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes.
Probab=97.11 E-value=0.0024 Score=63.89 Aligned_cols=41 Identities=17% Similarity=0.118 Sum_probs=38.2
Q ss_pred CCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCcc
Q 044617 71 PLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLL 111 (265)
Q Consensus 71 ~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~ 111 (265)
++.+|+.+.|+.|++.|+++.++|+.....+..+.+..|+-
T Consensus 631 ~lq~~v~etI~~L~~AGIkv~mlTGD~~~TA~~IA~~~~ii 671 (1057)
T TIGR01652 631 KLQEGVPETIELLRQAGIKIWVLTGDKVETAINIGYSCRLL 671 (1057)
T ss_pred hhhhccHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHhCCC
Confidence 78899999999999999999999999999999999888874
No 201
>TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC. The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily.
Probab=97.09 E-value=0.0013 Score=60.31 Aligned_cols=86 Identities=19% Similarity=0.310 Sum_probs=66.7
Q ss_pred CCCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCcccccceEEecCceecCCCceEEeeccccccCCCcccccC
Q 044617 70 CPLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRILPYHDSTLSHHGCNLCP 149 (265)
Q Consensus 70 ~~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp~~~~~~~ 149 (265)
-++.+++.+.++.|++.|+++.++|+.....+..+.+.+|+ ++. .. |..
T Consensus 346 d~lr~~~~~~i~~l~~~gi~~~~ltGD~~~~a~~ia~~lgi-------~~~---~~--------p~~------------- 394 (499)
T TIGR01494 346 DPLRDDAKETISELREAGIRVIMLTGDNVLTAKAIAKELGI-------FAR---VT--------PEE------------- 394 (499)
T ss_pred CCCchhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCc-------eec---cC--------HHH-------------
Confidence 37899999999999999999999999999999999999986 221 00 222
Q ss_pred CCCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccCCCCCCeeeec
Q 044617 150 SNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRDCDFVMPR 197 (265)
Q Consensus 150 ~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~~~~~~~~ 197 (265)
|...++.+.++ | ..+.|+||+.||..+.+ .++++++-
T Consensus 395 ----K~~~v~~l~~~-g---~~v~~vGDg~nD~~al~---~Advgia~ 431 (499)
T TIGR01494 395 ----KAALVEALQKK-G---RVVAMTGDGVNDAPALK---KADVGIAM 431 (499)
T ss_pred ----HHHHHHHHHHC-C---CEEEEECCChhhHHHHH---hCCCcccc
Confidence 78888877543 2 67999999999998884 44444443
No 202
>TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V). These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in.
Probab=97.06 E-value=0.0017 Score=64.77 Aligned_cols=42 Identities=14% Similarity=0.263 Sum_probs=39.6
Q ss_pred CCCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCcc
Q 044617 70 CPLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLL 111 (265)
Q Consensus 70 ~~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~ 111 (265)
-++.|++.+.|+.|++.|+++.++|+.....+..+.+..|+-
T Consensus 655 d~lr~~~~~~I~~l~~agi~v~miTGD~~~TA~~iA~~~gii 696 (1054)
T TIGR01657 655 NPLKPDTKEVIKELKRASIRTVMITGDNPLTAVHVARECGIV 696 (1054)
T ss_pred cCCCccHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCC
Confidence 378999999999999999999999999999999999999984
No 203
>COG2216 KdpB High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism]
Probab=96.87 E-value=0.0031 Score=56.47 Aligned_cols=87 Identities=13% Similarity=0.141 Sum_probs=65.4
Q ss_pred CCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCcccccceEEecCceecCCCceEEeeccccccCCCcccccCC
Q 044617 71 PLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRILPYHDSTLSHHGCNLCPS 150 (265)
Q Consensus 71 ~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp~~~~~~~~ 150 (265)
.+.||++|.+.+||+.|++.+.+|+...-....+..+.|++++... + . |
T Consensus 447 ivK~Gi~ERf~elR~MgIkTvM~TGDN~~TAa~IA~EAGVDdfiAe--a---------------t------P-------- 495 (681)
T COG2216 447 IVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAEAGVDDFIAE--A---------------T------P-------- 495 (681)
T ss_pred hcchhHHHHHHHHHhcCCeEEEEeCCCHHHHHHHHHHhCchhhhhc--C---------------C------h--------
Confidence 4679999999999999999999999999999999999998755321 0 0 1
Q ss_pred CCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccCCCCCCeeee
Q 044617 151 NLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRDCDFVMP 196 (265)
Q Consensus 151 ~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~~~~~~~ 196 (265)
..|-..+++-..+ -.=+.|.||+-||-.+. ..++++++
T Consensus 496 -EdK~~~I~~eQ~~----grlVAMtGDGTNDAPAL---AqAdVg~A 533 (681)
T COG2216 496 -EDKLALIRQEQAE----GRLVAMTGDGTNDAPAL---AQADVGVA 533 (681)
T ss_pred -HHHHHHHHHHHhc----CcEEEEcCCCCCcchhh---hhcchhhh
Confidence 1255555544433 34577999999999877 55666665
No 204
>KOG2134 consensus Polynucleotide kinase 3' phosphatase [Replication, recombination and repair]
Probab=96.82 E-value=0.0025 Score=54.98 Aligned_cols=83 Identities=16% Similarity=0.166 Sum_probs=51.9
Q ss_pred CCCChhHHHHHHHHHHcCCcEEEEeCCCHH------------HHHHHHHhcCcccccceEEecCceecCCCceEEeeccc
Q 044617 70 CPLDSHVAAAIKSAHSLGCDLKIVSDANQF------------YIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRILPYHD 137 (265)
Q Consensus 70 ~~~~~g~~e~l~~l~~~g~~~~ivS~~~~~------------~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~~~~~ 137 (265)
..+++.+..=|+.|.+.||.++|.||.... -++.++..+++. |. ++++ .+..
T Consensus 103 ~~l~~~vp~Klktl~~~g~~l~iftnq~~i~r~~~~~~~f~~Ki~~i~anl~vP--i~-~~~A-------------~~~~ 166 (422)
T KOG2134|consen 103 RILFPEVPSKLKTLYQDGIKLFIFTNQNGIARGKLELEEFKKKIKAIVANLGVP--IQ-LLAA-------------IIKG 166 (422)
T ss_pred eeeccccchhhhhhccCCeEEEEEecccccccCcchHHHHHHHHHHHHHhcCCc--eE-Eeee-------------ccCC
Confidence 356788888999999999999999985322 244455555543 21 2221 1233
Q ss_pred cccCCCcccccCCCCchHHHHHHHHHhcC----CCCceEEEEcCCC
Q 044617 138 STLSHHGCNLCPSNLCKGFVLDHVCTSFG----CGKQRFIYLGDGR 179 (265)
Q Consensus 138 ~~~kp~~~~~~~~~~~K~~~i~~~~~~~g----i~~~~~v~vGD~~ 179 (265)
.++|| --.+.+.+.+.++ |....++++||..
T Consensus 167 ~yRKP-----------~tGMwe~~~~~~nd~~~Isek~s~fvgdaa 201 (422)
T KOG2134|consen 167 KYRKP-----------STGMWEFLKRLENDSVEISEKASIFVGDAA 201 (422)
T ss_pred cccCc-----------chhHHHHHHHHhhccceeeechhhhhhhhc
Confidence 45566 3456666665554 5556677999964
No 205
>PLN03190 aminophospholipid translocase; Provisional
Probab=96.81 E-value=0.0081 Score=60.40 Aligned_cols=41 Identities=22% Similarity=0.161 Sum_probs=36.7
Q ss_pred CCCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCc
Q 044617 70 CPLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGL 110 (265)
Q Consensus 70 ~~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl 110 (265)
-++.+|+.+.++.|++.|+++.++|+.....+..+....++
T Consensus 725 D~lr~~v~~~I~~l~~agi~v~mlTGD~~~tAi~IA~s~~L 765 (1178)
T PLN03190 725 DKLQQGVPEAIESLRTAGIKVWVLTGDKQETAISIGYSSKL 765 (1178)
T ss_pred cCCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHhCC
Confidence 37899999999999999999999999998888888776665
No 206
>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family. This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.
Probab=96.67 E-value=0.013 Score=49.66 Aligned_cols=50 Identities=8% Similarity=0.097 Sum_probs=36.3
Q ss_pred CCCChhHHHHHHHHHHcCCcEEEEeCCC---HHHHHHHHHhcCcccccceEEe
Q 044617 70 CPLDSHVAAAIKSAHSLGCDLKIVSDAN---QFYIETIMEHHGLLGCFSEIYT 119 (265)
Q Consensus 70 ~~~~~g~~e~l~~l~~~g~~~~ivS~~~---~~~i~~~l~~~gl~~~f~~i~~ 119 (265)
...+||+.++|++|+++|++++++||+. .......++.+|+....+.+++
T Consensus 17 ~~~~~ga~e~l~~L~~~g~~~~~~Tnns~~~~~~~~~~l~~~G~~~~~~~i~t 69 (279)
T TIGR01452 17 ERVVPGAPELLDRLARAGKAALFVTNNSTKSRAEYALKFARLGFNGLAEQLFS 69 (279)
T ss_pred CeeCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCChhhEec
Confidence 4578999999999999999999999964 3333345677887533334443
No 207
>KOG2116 consensus Protein involved in plasmid maintenance/nuclear protein involved in lipid metabolism [Cell motility; Lipid transport and metabolism]
Probab=96.54 E-value=0.032 Score=51.41 Aligned_cols=134 Identities=16% Similarity=0.092 Sum_probs=73.3
Q ss_pred ceEEEEecCCCCCCCCchHHHHHHhCchHHHHHHHccCChhHHHHHHHHHHHhCCCCHHHHHHHhcCCCCChhHHHHHHH
Q 044617 3 DVVVVFDFDRTLIDDDSDNWVVTQMGLTHLFNQLRSTLPWNSLMDRMMKELHSQGKTVEDIANCLRQCPLDSHVAAAIKS 82 (265)
Q Consensus 3 ~k~iifD~DGTL~ds~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~e~l~~ 82 (265)
.++||.|+||||+.|+..-.++ ...| .-.-+.|+..+...
T Consensus 530 ~kIVISDIDGTITKSDvLGh~l-----------------------------p~iG-----------kDWTh~GVAkLyt~ 569 (738)
T KOG2116|consen 530 DKIVISDIDGTITKSDVLGHVL-----------------------------PMIG-----------KDWTHTGVAKLYTK 569 (738)
T ss_pred CcEEEecCCCceEhhhhhhhhh-----------------------------hhhc-----------CcchhhhHHHHHHH
Confidence 3789999999999996511111 1111 22346799999999
Q ss_pred HHHcCCcEEEEeCCC---HHHHHHHHHhcCcccc-c---ceEEecCceecCCCceEEeeccccccCCCcccccCCCCchH
Q 044617 83 AHSLGCDLKIVSDAN---QFYIETIMEHHGLLGC-F---SEIYTNPTYVDEQGRLRILPYHDSTLSHHGCNLCPSNLCKG 155 (265)
Q Consensus 83 l~~~g~~~~ivS~~~---~~~i~~~l~~~gl~~~-f---~~i~~~~~~~d~~~~~~~~~~~~~~~kp~~~~~~~~~~~K~ 155 (265)
.+++||++..+|.+. ....+..|+.+.=+.+ . ..+++- ++.+.-.--..+.++|+ .-|-
T Consensus 570 Ik~NGYk~lyLSARaIgQA~~TR~yL~nv~QdG~~LPdGPViLSP------d~lf~Al~REVI~RkPe--------~FKI 635 (738)
T KOG2116|consen 570 IKENGYKILYLSARAIGQADSTRQYLKNVEQDGKKLPDGPVILSP------DSLFAALHREVIERKPE--------VFKI 635 (738)
T ss_pred HHhCCeeEEEEehhhhhhhHHHHHHHHHHhhcCccCCCCCEEeCC------CcchHHHHHHHHHcCch--------hhhH
Confidence 999999999999863 2233333332211000 0 012221 11110000112233442 2255
Q ss_pred HHHHHHHHhcCCCCceEE-EEcCCCCCcccccCCCC
Q 044617 156 FVLDHVCTSFGCGKQRFI-YLGDGRGDFCPTLKLRD 190 (265)
Q Consensus 156 ~~i~~~~~~~gi~~~~~v-~vGD~~~Di~~a~~~~~ 190 (265)
.-+..+.+-+.-.....+ .||...+|+..-+++|.
T Consensus 636 AcL~DIk~LF~p~~nPFYAgFGNR~TDviSY~~VgV 671 (738)
T KOG2116|consen 636 ACLTDIKNLFPPSGNPFYAGFGNRITDVISYRQVGV 671 (738)
T ss_pred HHHHHHHHhcCCCCCceeeecCCCcccceeeeeecC
Confidence 666666666652333333 68888999988766555
No 208
>TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant. Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein.
Probab=96.13 E-value=0.03 Score=55.18 Aligned_cols=77 Identities=16% Similarity=0.250 Sum_probs=52.7
Q ss_pred HHHHHHHHHhcCcccccceEEecCceecCCCceEEeeccccccCCCcccccCCCCchHHHHHHHHHhcCCCCceE-EEEc
Q 044617 98 QFYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRILPYHDSTLSHHGCNLCPSNLCKGFVLDHVCTSFGCGKQRF-IYLG 176 (265)
Q Consensus 98 ~~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp~~~~~~~~~~~K~~~i~~~~~~~gi~~~~~-v~vG 176 (265)
...++..|+..++.-. .+++.. ... .++.|...+|+.+++++..++|++.+++ |++|
T Consensus 923 v~elr~~Lr~~gLr~~--~iys~~-----~~~---------------LDVlP~~ASKgqAlRyL~~rwgi~l~~v~VfaG 980 (1050)
T TIGR02468 923 VKELRKLLRIQGLRCH--AVYCRN-----GTR---------------LNVIPLLASRSQALRYLFVRWGIELANMAVFVG 980 (1050)
T ss_pred HHHHHHHHHhCCCceE--EEeecC-----CcE---------------eeeeeCCCCHHHHHHHHHHHcCCChHHeEEEec
Confidence 4567777888887632 556531 011 1234667889999999999999999999 5699
Q ss_pred CCCC-CcccccCCCCCCeeeec
Q 044617 177 DGRG-DFCPTLKLRDCDFVMPR 197 (265)
Q Consensus 177 D~~~-Di~~a~~~~~~~~~~~~ 197 (265)
|+-| |++.+.. |..-.++.+
T Consensus 981 dSGntD~e~Ll~-G~~~tvi~~ 1001 (1050)
T TIGR02468 981 ESGDTDYEGLLG-GLHKTVILK 1001 (1050)
T ss_pred cCCCCCHHHHhC-CceeEEEEe
Confidence 9999 9775544 443333333
No 209
>KOG2961 consensus Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=95.89 E-value=0.12 Score=39.00 Aligned_cols=44 Identities=14% Similarity=0.209 Sum_probs=31.6
Q ss_pred chHHHHHHHHHhcC-CCCceEEEEcCCC-CCcccccCCCCCCeeee
Q 044617 153 CKGFVLDHVCTSFG-CGKQRFIYLGDGR-GDFCPTLKLRDCDFVMP 196 (265)
Q Consensus 153 ~K~~~i~~~~~~~g-i~~~~~v~vGD~~-~Di~~a~~~~~~~~~~~ 196 (265)
|..+.+.+...... ..+++++||||.. .|+-+|.++|.-+++.-
T Consensus 122 ct~E~~~y~~~Nshv~~~se~~~vGDRlfTDI~~aN~mGs~gVw~~ 167 (190)
T KOG2961|consen 122 CTAEEVEYHFGNSHVCTSSELIMVGDRLFTDIVYANRMGSLGVWTE 167 (190)
T ss_pred ccHHHHHHHhCCcccCChhHeEEEccchhhhHhhhhhccceeEEec
Confidence 35667776665443 5689999999995 99999977665555443
No 210
>COG4502 5'(3')-deoxyribonucleotidase [Nucleotide transport and metabolism]
Probab=95.55 E-value=0.039 Score=40.97 Aligned_cols=53 Identities=15% Similarity=0.206 Sum_probs=36.4
Q ss_pred HhcCCCCChhHHHHHHHHHHcCCcEEEEeCCC--HHHHH----HHHHhcCcccccceEEe
Q 044617 66 CLRQCPLDSHVAAAIKSAHSLGCDLKIVSDAN--QFYIE----TIMEHHGLLGCFSEIYT 119 (265)
Q Consensus 66 ~~~~~~~~~g~~e~l~~l~~~g~~~~ivS~~~--~~~i~----~~l~~~gl~~~f~~i~~ 119 (265)
+.++..+.|++.++++.|-+. +.++|+|... ....+ =+.+.+.+-.+-..|+|
T Consensus 63 fFRnL~V~p~aq~v~keLt~~-y~vYivtaamdhp~s~~dK~eWl~E~FPFi~~qn~vfC 121 (180)
T COG4502 63 FFRNLGVQPFAQTVLKELTSI-YNVYIVTAAMDHPKSCEDKGEWLKEKFPFISYQNIVFC 121 (180)
T ss_pred hhhhcCccccHHHHHHHHHhh-heEEEEEeccCCchhHHHHHHHHHHHCCCCChhhEEEe
Confidence 445778899999999999997 9999999872 22222 23345555555445555
No 211
>KOG0204 consensus Calcium transporting ATPase [Inorganic ion transport and metabolism]
Probab=95.14 E-value=0.15 Score=48.73 Aligned_cols=137 Identities=15% Similarity=0.154 Sum_probs=82.9
Q ss_pred CCCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCcccccceEEec-CceecC---CCceEEeecc--ccccCCC
Q 044617 70 CPLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTN-PTYVDE---QGRLRILPYH--DSTLSHH 143 (265)
Q Consensus 70 ~~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~~i~~~-~~~~d~---~~~~~~~~~~--~~~~kp~ 143 (265)
-+..||+++.++.+++.|+.+-.||+..-..++.+..+.|+-..=....+. ...|.+ .....++|.. ...+.|
T Consensus 646 DPvRPgV~~AV~~Cq~AGItVRMVTGDNI~TAkAIA~eCGILt~~~d~~~lEG~eFr~~s~ee~~~i~pkl~VlARSSP- 724 (1034)
T KOG0204|consen 646 DPVRPGVPEAVQLCQRAGITVRMVTGDNINTAKAIARECGILTPGGDFLALEGKEFRELSQEERDKIWPKLRVLARSSP- 724 (1034)
T ss_pred CCCCCCcHHHHHHHHHcCcEEEEEeCCcHHHHHHHHHHcccccCCCccceecchhhhhcCHHHHHhhhhhheeeecCCC-
Confidence 367999999999999999999999999999999999999874332211111 001110 0000011110 001122
Q ss_pred cccccCCCCchHHHHHHHHHhcCCCCceEE-EEcCCCCCcccccCCCCCCeeeecC--CCchhhhhhcCCCeeeEEEEeC
Q 044617 144 GCNLCPSNLCKGFVLDHVCTSFGCGKQRFI-YLGDGRGDFCPTLKLRDCDFVMPRK--NYPLWDRICSNPMLIKAKVHEW 220 (265)
Q Consensus 144 ~~~~~~~~~~K~~~i~~~~~~~gi~~~~~v-~vGD~~~Di~~a~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 220 (265)
.+|...++.+.+. .+++ .-|||-||-.+. ..++++++-+ |....+ +. .|..+. -
T Consensus 725 --------~DK~lLVk~L~~~-----g~VVAVTGDGTNDaPAL---keADVGlAMGIaGTeVAK---Ea---SDIIi~-D 781 (1034)
T KOG0204|consen 725 --------NDKHLLVKGLIKQ-----GEVVAVTGDGTNDAPAL---KEADVGLAMGIAGTEVAK---EA---SDIIIL-D 781 (1034)
T ss_pred --------chHHHHHHHHHhc-----CcEEEEecCCCCCchhh---hhcccchhccccchhhhh---hh---CCeEEE-c
Confidence 3477777777643 3444 669999999888 4577777654 333322 22 244443 3
Q ss_pred CCHHHHHHHH
Q 044617 221 SSAEELKKIL 230 (265)
Q Consensus 221 ~~~~el~~~l 230 (265)
+||.-|...+
T Consensus 782 DNFssIVk~v 791 (1034)
T KOG0204|consen 782 DNFSSIVKAV 791 (1034)
T ss_pred CchHHHHHHH
Confidence 8888776654
No 212
>PLN03064 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=95.02 E-value=0.068 Score=52.36 Aligned_cols=40 Identities=8% Similarity=0.154 Sum_probs=33.1
Q ss_pred CCCChhHHHHHHHHHHc-CCcEEEEeCCCHHHHHHHHHhcC
Q 044617 70 CPLDSHVAAAIKSAHSL-GCDLKIVSDANQFYIETIMEHHG 109 (265)
Q Consensus 70 ~~~~~g~~e~l~~l~~~-g~~~~ivS~~~~~~i~~~l~~~g 109 (265)
..+.|++.++|+.|.+. +..++|+|+.....++..+...+
T Consensus 621 a~p~p~l~~~L~~L~~dp~n~VaIVSGR~~~~Le~~fg~~~ 661 (934)
T PLN03064 621 LRLHPELKEPLRALCSDPKTTIVVLSGSDRSVLDENFGEFD 661 (934)
T ss_pred cCCCHHHHHHHHHHHhCCCCeEEEEeCCCHHHHHHHhCCCC
Confidence 45778999999999875 56899999999999999886543
No 213
>KOG3189 consensus Phosphomannomutase [Lipid transport and metabolism]
Probab=95.00 E-value=0.064 Score=42.31 Aligned_cols=14 Identities=36% Similarity=0.563 Sum_probs=12.4
Q ss_pred eEEEEecCCCCCCC
Q 044617 4 VVVVFDFDRTLIDD 17 (265)
Q Consensus 4 k~iifD~DGTL~ds 17 (265)
-++.||+||||+..
T Consensus 12 ~l~lfdvdgtLt~~ 25 (252)
T KOG3189|consen 12 TLCLFDVDGTLTPP 25 (252)
T ss_pred eEEEEecCCccccc
Confidence 47889999999877
No 214
>KOG2630 consensus Enolase-phosphatase E-1 [Amino acid transport and metabolism]
Probab=94.92 E-value=0.16 Score=41.12 Aligned_cols=99 Identities=13% Similarity=0.078 Sum_probs=73.2
Q ss_pred CCCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcC---cccc----cceEEecCceecCCCceEEeeccccccCC
Q 044617 70 CPLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHG---LLGC----FSEIYTNPTYVDEQGRLRILPYHDSTLSH 142 (265)
Q Consensus 70 ~~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~g---l~~~----f~~i~~~~~~~d~~~~~~~~~~~~~~~kp 142 (265)
..+++++...++.-++.|++++|-|++.....+.+..+-+ +..+ ||.-++.
T Consensus 122 ~~v~aDv~~a~e~w~~~g~~vyIYSSgsv~AqKllfg~s~~gdl~~y~~gyfDt~iG~---------------------- 179 (254)
T KOG2630|consen 122 AHVYADVLPAIERWSGEGVRVYIYSSGSVAAQKLLFGYSDAGDLRKYISGYFDTTIGL---------------------- 179 (254)
T ss_pred ccccchhHHHHHHHhhcCceEEEEcCCcHHHHHHHHcccCcchHHHHhhhhhhccccc----------------------
Confidence 4789999999999999999999999998877776654432 2222 2221110
Q ss_pred CcccccCCCCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccCCCCCCeeeecCC
Q 044617 143 HGCNLCPSNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRDCDFVMPRKN 199 (265)
Q Consensus 143 ~~~~~~~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~~~~~~~~~~ 199 (265)
..-...+..+.+..|.++.++++.-|-..-..+|+.+|.......+.|
T Consensus 180 ---------K~e~~sy~~I~~~Ig~s~~eiLfLTd~~~Ea~aa~~aGl~a~l~~rPg 227 (254)
T KOG2630|consen 180 ---------KVESQSYKKIGHLIGKSPREILFLTDVPREAAAARKAGLQAGLVSRPG 227 (254)
T ss_pred ---------eehhHHHHHHHHHhCCChhheEEeccChHHHHHHHhcccceeeeecCC
Confidence 013577889999999999999999999999989977776655555554
No 215
>KOG2470 consensus Similar to IMP-GMP specific 5'-nucleotidase [Nucleotide transport and metabolism]
Probab=94.71 E-value=0.07 Score=45.73 Aligned_cols=104 Identities=12% Similarity=0.140 Sum_probs=63.8
Q ss_pred ChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhc---CcccccceEEecCceecCCCceEEeeccccccCCCcc-c--
Q 044617 73 DSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHH---GLLGCFSEIYTNPTYVDEQGRLRILPYHDSTLSHHGC-N-- 146 (265)
Q Consensus 73 ~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~---gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp~~~-~-- 146 (265)
-|....+++.|+++|-+++++||++..++..-++.+ .+.+.||.|+.. .+++++ ....++|+.+ +
T Consensus 242 ~~ql~~fl~kL~~~GKklFLiTNSPysFVd~GM~flvG~~WRdlFDVVIvq------A~KP~F---ftde~rPfR~~dek 312 (510)
T KOG2470|consen 242 NPQLLAFLRKLKDHGKKLFLITNSPYSFVDKGMRFLVGDDWRDLFDVVIVQ------ANKPEF---FTDERRPFRKYDEK 312 (510)
T ss_pred cHHHHHHHHHHHHhcCcEEEEeCCchhhhhcCceeeeCccHHhhhheeEEe------cCCCcc---cccccCcchhhccc
Confidence 457788999999999999999999999988877654 455678776642 111110 0111122221 1
Q ss_pred -------cc-CCCCc---hHHHHHHHHHhcCCCCceEEEEcCCC-CCcccc
Q 044617 147 -------LC-PSNLC---KGFVLDHVCTSFGCGKQRFIYLGDGR-GDFCPT 185 (265)
Q Consensus 147 -------~~-~~~~~---K~~~i~~~~~~~gi~~~~~v~vGD~~-~Di~~a 185 (265)
.+ ....+ +..-+..+++--|....+++|+||.. +|+.-.
T Consensus 313 ~~sl~wdkv~klekgkiYy~G~l~~flelt~WrG~~VlYFGDHlySDLad~ 363 (510)
T KOG2470|consen 313 RGSLLWDKVDKLEKGKIYYQGNLKSFLELTGWRGPRVLYFGDHLYSDLADL 363 (510)
T ss_pred ccchhhhhhhhcccCceeeeccHHHHHHHhccCCCeeEEecCcchhhhhhh
Confidence 00 00111 22345566666666667999999996 888443
No 216
>KOG1618 consensus Predicted phosphatase [General function prediction only]
Probab=94.69 E-value=0.11 Score=43.97 Aligned_cols=41 Identities=5% Similarity=-0.001 Sum_probs=29.7
Q ss_pred CCChhHHHHHHHHHHc----CCcEEEEeCCCHH----HHHHHHHhcCcc
Q 044617 71 PLDSHVAAAIKSAHSL----GCDLKIVSDANQF----YIETIMEHHGLL 111 (265)
Q Consensus 71 ~~~~g~~e~l~~l~~~----g~~~~ivS~~~~~----~i~~~l~~~gl~ 111 (265)
...+++.+.++.|..+ .++++++||+.-. -++.+-+.+|++
T Consensus 51 ~~i~~~~~Alr~L~~~~g~lkIP~vfLTNGGg~~E~~rA~~lS~~Lgv~ 99 (389)
T KOG1618|consen 51 RPIPGALKALRRLVDNQGQLKIPFVFLTNGGGILESSRAQELSALLGVE 99 (389)
T ss_pred CCCcchHHHHHHHHhcCCCeeccEEEEeCCCCcchhhHHHHHHHhhCCc
Confidence 5578999999999887 7999999997432 344444556653
No 217
>KOG1605 consensus TFIIF-interacting CTD phosphatase, including NLI-interacting factor (involved in RNA polymerase II regulation) [Transcription]
Probab=94.50 E-value=0.012 Score=48.96 Aligned_cols=40 Identities=10% Similarity=0.220 Sum_probs=34.9
Q ss_pred CCCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCc
Q 044617 70 CPLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGL 110 (265)
Q Consensus 70 ~~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl 110 (265)
+.-+|++.++|....+. +.+++.|++...+...++..++-
T Consensus 130 V~kRP~vdeFL~~~s~~-~e~v~FTAs~~~Ya~~v~D~LD~ 169 (262)
T KOG1605|consen 130 VRKRPHVDEFLSRVSKW-YELVLFTASLEVYADPLLDILDP 169 (262)
T ss_pred EEcCCCHHHHHHHhHHH-HHHHHHHhhhHHHHHHHHHHccC
Confidence 34589999999999886 89999999999999999988764
No 218
>KOG0206 consensus P-type ATPase [General function prediction only]
Probab=94.25 E-value=0.19 Score=50.15 Aligned_cols=40 Identities=18% Similarity=0.118 Sum_probs=34.7
Q ss_pred CCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCc
Q 044617 71 PLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGL 110 (265)
Q Consensus 71 ~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl 110 (265)
++.+|+.+.|+.|++.|+++-++|+...+.+-.+.-..++
T Consensus 651 kLQdgVPetI~~L~~AGIKIWVLTGDK~ETAiNIg~sC~L 690 (1151)
T KOG0206|consen 651 KLQDGVPETIAKLAQAGIKIWVLTGDKQETAINIGYSCRL 690 (1151)
T ss_pred hhccCchHHHHHHHHcCCEEEEEcCcHHHHHHHHHHhhcC
Confidence 6788999999999999999999999988887777665544
No 219
>COG4850 Uncharacterized conserved protein [Function unknown]
Probab=93.98 E-value=0.61 Score=39.76 Aligned_cols=95 Identities=17% Similarity=0.163 Sum_probs=55.6
Q ss_pred CCCCChhHHHHHHHHHHcC-CcEEEEeCCCHHHHHH---HHHhcCcccccceEEecCceecCCCceEEeeccccccCCCc
Q 044617 69 QCPLDSHVAAAIKSAHSLG-CDLKIVSDANQFYIET---IMEHHGLLGCFSEIYTNPTYVDEQGRLRILPYHDSTLSHHG 144 (265)
Q Consensus 69 ~~~~~~g~~e~l~~l~~~g-~~~~ivS~~~~~~i~~---~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp~~ 144 (265)
.-.++||+..+++.|.+.| .+++.+||++-..-.. .+...++.. -..++-+ . .+.+.. +
T Consensus 194 tr~~ipGV~~~yr~l~~~~~apvfYvSnSPw~~f~~L~efi~~~~~P~-GPl~L~~---~--g~~~~~---------i-- 256 (373)
T COG4850 194 TRQVIPGVSAWYRALTNLGDAPVFYVSNSPWQLFPTLQEFITNRNFPY-GPLLLRR---W--GGVLDN---------I-- 256 (373)
T ss_pred ccCCCCCHHHHHHHHHhcCCCCeEEecCChhHhHHHHHHHHhcCCCCC-CchhHhh---c--CCcccc---------c--
Confidence 4578999999999999988 8999999997554333 222222210 0001100 0 000000 0
Q ss_pred ccccCCCCchHHHHHHHHHhcCCCCceEEEEcCC-CCCccc
Q 044617 145 CNLCPSNLCKGFVLDHVCTSFGCGKQRFIYLGDG-RGDFCP 184 (265)
Q Consensus 145 ~~~~~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~-~~Di~~ 184 (265)
+-+....|...+..++.++ +-.+.+.|||+ +-|.+.
T Consensus 257 --~~sga~rK~~~l~nil~~~--p~~kfvLVGDsGE~DpeI 293 (373)
T COG4850 257 --IESGAARKGQSLRNILRRY--PDRKFVLVGDSGEHDPEI 293 (373)
T ss_pred --ccchhhhcccHHHHHHHhC--CCceEEEecCCCCcCHHH
Confidence 0012233778888888887 34689999998 678754
No 220
>COG5610 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=93.73 E-value=0.36 Score=43.02 Aligned_cols=100 Identities=16% Similarity=0.143 Sum_probs=72.7
Q ss_pred CCCCCh--hHHHHHHHHHHcCCcEEEEeCC--CHHHHHHHHHhcCcccccceEEecCceecCCCceEEeeccccccCCCc
Q 044617 69 QCPLDS--HVAAAIKSAHSLGCDLKIVSDA--NQFYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRILPYHDSTLSHHG 144 (265)
Q Consensus 69 ~~~~~~--g~~e~l~~l~~~g~~~~ivS~~--~~~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp~~ 144 (265)
...++| ...++.+.+.+.|.+++++|.- +...++.++...|.+-.--.++.+ +... ..|
T Consensus 95 KevLypn~~~~eL~e~ai~n~krVIlISDMYlps~Il~~~L~s~g~d~~nipiY~S-------~e~r-------l~K--- 157 (635)
T COG5610 95 KEVLYPNKKNIELVEEAIKNEKRVILISDMYLPSSILRTFLNSFGPDFNNIPIYMS-------SEFR-------LKK--- 157 (635)
T ss_pred eeEeeccccchHHHHHHHhCCCeEEEEecccCcHHHHHHHHHhcCCCccCceeeec-------ceee-------hhc---
Confidence 334555 5668999999999999999986 455688888888875332224442 1110 111
Q ss_pred ccccCCCCchHHHHHHHHHhcCCCCceEEEEcCCC-CCcccccCCCCCCe
Q 044617 145 CNLCPSNLCKGFVLDHVCTSFGCGKQRFIYLGDGR-GDFCPTLKLRDCDF 193 (265)
Q Consensus 145 ~~~~~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~-~Di~~a~~~~~~~~ 193 (265)
..+..+..+++..++++...+.+||.. .|..+++++|.++.
T Consensus 158 --------nSg~LFk~Vlk~EnVd~~~w~H~GDN~~aD~l~pk~LgI~Tl 199 (635)
T COG5610 158 --------NSGNLFKAVLKLENVDPKKWIHCGDNWVADYLKPKNLGISTL 199 (635)
T ss_pred --------ccchHHHHHHhhcCCChhheEEecCchhhhhcCccccchhHH
Confidence 256789999999999999999999995 89999988887653
No 221
>KOG0210 consensus P-type ATPase [Inorganic ion transport and metabolism]
Probab=93.73 E-value=0.27 Score=46.10 Aligned_cols=96 Identities=13% Similarity=0.098 Sum_probs=60.7
Q ss_pred CCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHh--cCcccccceEEecCceecCCCceEEeeccccccCCCccccc
Q 044617 71 PLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEH--HGLLGCFSEIYTNPTYVDEQGRLRILPYHDSTLSHHGCNLC 148 (265)
Q Consensus 71 ~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~--~gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp~~~~~~ 148 (265)
.-..++..-|..|+.++.-..++++......-...+. ..+......+++++.. |.
T Consensus 711 ~sr~dah~eL~~lR~k~~~aLvi~G~Sl~~cl~yye~Ef~el~~~~~aVv~CRct----------Pt------------- 767 (1051)
T KOG0210|consen 711 TSRGDAHNELNNLRRKTDCALVIDGESLEFCLKYYEDEFIELVCELPAVVCCRCT----------PT------------- 767 (1051)
T ss_pred CCchHHHHHHHHhhcCCCcEEEEcCchHHHHHHHHHHHHHHHHHhcCcEEEEecC----------hh-------------
Confidence 4456888889999998766667777665544443332 1211122345554210 22
Q ss_pred CCCCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccCCCCCCeeeec
Q 044617 149 PSNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRDCDFVMPR 197 (265)
Q Consensus 149 ~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~~~~~~~~ 197 (265)
.|++++..+.++-| .++-+||||-||+.|-.. ..+++++.+
T Consensus 768 ----QKA~v~~llq~~t~---krvc~IGDGGNDVsMIq~-A~~GiGI~g 808 (1051)
T KOG0210|consen 768 ----QKAQVVRLLQKKTG---KRVCAIGDGGNDVSMIQA-ADVGIGIVG 808 (1051)
T ss_pred ----HHHHHHHHHHHhhC---ceEEEEcCCCccchheee-cccceeeec
Confidence 28888888887765 689999999999998854 334555543
No 222
>TIGR01658 EYA-cons_domain eyes absent protein conserved domain. This domain is common to all eyes absent (EYA) homologs. Metazoan EYA's also contain a variable N-terminal domain consisting largely of low-complexity sequences.
Probab=91.40 E-value=0.39 Score=39.35 Aligned_cols=39 Identities=23% Similarity=0.352 Sum_probs=33.0
Q ss_pred CCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccCCC
Q 044617 151 NLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLR 189 (265)
Q Consensus 151 ~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~ 189 (265)
..+|..-++++.+++|-+.-..++||||..--.+|+.++
T Consensus 212 kvGK~~cFe~I~~Rfg~p~~~f~~IGDG~eEe~aAk~l~ 250 (274)
T TIGR01658 212 KVGKLQCFKWIKERFGHPKVRFCAIGDGWEECTAAQAMN 250 (274)
T ss_pred hcchHHHHHHHHHHhCCCCceEEEeCCChhHHHHHHhcC
Confidence 356999999999999987788999999998888885533
No 223
>COG5083 SMP2 Uncharacterized protein involved in plasmid maintenance [General function prediction only]
Probab=91.06 E-value=0.3 Score=43.23 Aligned_cols=17 Identities=35% Similarity=0.526 Sum_probs=15.2
Q ss_pred ceEEEEecCCCCCCCCc
Q 044617 3 DVVVVFDFDRTLIDDDS 19 (265)
Q Consensus 3 ~k~iifD~DGTL~ds~~ 19 (265)
.++|++|+||||+.++.
T Consensus 375 ~kiVVsDiDGTITkSD~ 391 (580)
T COG5083 375 KKIVVSDIDGTITKSDA 391 (580)
T ss_pred CcEEEEecCCcEEehhh
Confidence 57899999999999965
No 224
>COG5663 Uncharacterized conserved protein [Function unknown]
Probab=88.11 E-value=0.94 Score=34.89 Aligned_cols=34 Identities=12% Similarity=0.025 Sum_probs=24.8
Q ss_pred CCCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHH
Q 044617 70 CPLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETI 104 (265)
Q Consensus 70 ~~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~ 104 (265)
..+..++...|..++++ .+++.+|+......+.-
T Consensus 71 ~l~~q~v~~~L~~~~e~-~~L~~itar~~dl~~iT 104 (194)
T COG5663 71 ALLAQLVKQVLPSLKEE-HRLIYITARKADLTRIT 104 (194)
T ss_pred HHHHHHHHHHhHHHHhh-ceeeeeehhhHHHHHHH
Confidence 44567888899998886 68888888766654443
No 225
>KOG0209 consensus P-type ATPase [Inorganic ion transport and metabolism]
Probab=87.31 E-value=2.6 Score=40.70 Aligned_cols=43 Identities=16% Similarity=0.375 Sum_probs=38.7
Q ss_pred CCCCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCcc
Q 044617 69 QCPLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLL 111 (265)
Q Consensus 69 ~~~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~ 111 (265)
..++.+++++.|+.|++.+++++.+|+...-.+-.+.+++|+-
T Consensus 673 ~CPlK~Ds~~~I~el~~SSH~vvMITGDnpLTAchVak~v~iv 715 (1160)
T KOG0209|consen 673 SCPLKPDSKKTIKELNNSSHRVVMITGDNPLTACHVAKEVGIV 715 (1160)
T ss_pred eCCCCccHHHHHHHHhccCceEEEEeCCCccchheehheeeee
Confidence 5688999999999999999999999999888888888888874
No 226
>KOG0203 consensus Na+/K+ ATPase, alpha subunit [Inorganic ion transport and metabolism]
Probab=84.16 E-value=2.2 Score=41.14 Aligned_cols=40 Identities=20% Similarity=0.343 Sum_probs=35.6
Q ss_pred CCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCc
Q 044617 71 PLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGL 110 (265)
Q Consensus 71 ~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl 110 (265)
++...+.+.+..+++.|++++.||+.+....+.+.+..|+
T Consensus 590 PPR~~vP~Av~~CrsAGIkvimVTgdhpiTAkAiA~~vgI 629 (1019)
T KOG0203|consen 590 PPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKSVGI 629 (1019)
T ss_pred CCcccCchhhhhhhhhCceEEEEecCccchhhhhhhheee
Confidence 4567888999999999999999999999999998888885
No 227
>PF06437 ISN1: IMP-specific 5'-nucleotidase; InterPro: IPR009453 The Saccharomyces cerevisiae ISN1 (YOR155c) gene encodes an IMP-specific 5'-nucleotidase, which catalyses degradation of IMP to inosine as part of the purine salvage pathway.; GO: 0000287 magnesium ion binding, 0016791 phosphatase activity, 0009117 nucleotide metabolic process
Probab=83.05 E-value=3.6 Score=36.10 Aligned_cols=34 Identities=26% Similarity=0.167 Sum_probs=21.1
Q ss_pred ChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHH
Q 044617 73 DSHVAAAIKSAHSLGCDLKIVSDANQFYIETIME 106 (265)
Q Consensus 73 ~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~ 106 (265)
...+...|-.|-++|+.++|||..-........+
T Consensus 168 d~pvi~~ii~LL~~gv~VgIVTAAGY~~a~kY~~ 201 (408)
T PF06437_consen 168 DNPVIPRIIKLLRRGVKVGIVTAAGYPGAEKYEE 201 (408)
T ss_pred CchHHHHHHHHHhcCCeEEEEeCCCCCChHHHHH
Confidence 3445555555566699999999865544444333
No 228
>KOG4549 consensus Magnesium-dependent phosphatase [General function prediction only]
Probab=80.58 E-value=8.4 Score=28.32 Aligned_cols=92 Identities=8% Similarity=-0.002 Sum_probs=59.8
Q ss_pred CCCCChhHHHHHHHHHHcCCcEEEEeCCC-HHHHHHHHHhcCcccccceEEecCceecCCCceEEeeccccccCCCcccc
Q 044617 69 QCPLDSHVAAAIKSAHSLGCDLKIVSDAN-QFYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRILPYHDSTLSHHGCNL 147 (265)
Q Consensus 69 ~~~~~~g~~e~l~~l~~~g~~~~ivS~~~-~~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp~~~~~ 147 (265)
...+|++++..|..|+++|+.++++|++. ..++...|+.+.+... .+..... . +. ++. .
T Consensus 42 e~~fY~Di~rIL~dLk~~GVtl~~ASRt~ap~iA~q~L~~fkvk~~--Gvlkps~--e--~f----t~~------~---- 101 (144)
T KOG4549|consen 42 EMIFYDDIRRILVDLKKLGVTLIHASRTMAPQIASQGLETFKVKQT--GVLKPSL--E--EF----TFE------A---- 101 (144)
T ss_pred eeeeccchhHHHHHHHhcCcEEEEecCCCCHHHHHHHHHHhccCcc--cccchhh--h--cC----cee------e----
Confidence 56789999999999999999999999875 5567778887766433 2221100 0 00 000 0
Q ss_pred cCCCCchHHHHHHHHHhcCCCCceEEEEcCCCCC
Q 044617 148 CPSNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGD 181 (265)
Q Consensus 148 ~~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~D 181 (265)
--..+|-..+..+-...++...+..++.|-...
T Consensus 102 -~g~gsklghfke~~n~s~~~~k~~~~fdDesrn 134 (144)
T KOG4549|consen 102 -VGDGSKLGHFKEFTNNSNSIEKNKQVFDDESRN 134 (144)
T ss_pred -ecCcccchhHHHHhhccCcchhceeeecccccC
Confidence 001236666777777777777788888876543
No 229
>PF06189 5-nucleotidase: 5'-nucleotidase; InterPro: IPR010394 This family consists of both eukaryotic and prokaryotic 5'-nucleotidase sequences (3.1.3.5 from EC).; GO: 0000166 nucleotide binding, 0000287 magnesium ion binding, 0008253 5'-nucleotidase activity, 0009117 nucleotide metabolic process, 0005737 cytoplasm
Probab=80.08 E-value=3 Score=34.64 Aligned_cols=74 Identities=16% Similarity=0.198 Sum_probs=43.4
Q ss_pred hhHHHHHHHHHHc------CCcEEEEeCCCHHHHHHH---HHhcCcccccceEEecCceecCCCceEEeeccccccCCCc
Q 044617 74 SHVAAAIKSAHSL------GCDLKIVSDANQFYIETI---MEHHGLLGCFSEIYTNPTYVDEQGRLRILPYHDSTLSHHG 144 (265)
Q Consensus 74 ~g~~e~l~~l~~~------g~~~~ivS~~~~~~i~~~---l~~~gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp~~ 144 (265)
......|.+++++ -++++|||.+....-+++ |+..|+. +|..+..
T Consensus 167 ~~fl~~L~~lQ~~~~~~~~piRtalVTAR~apah~RvI~TLr~Wgv~--vDEafFL------------------------ 220 (264)
T PF06189_consen 167 KDFLKKLSKLQKKFPPENSPIRTALVTARSAPAHERVIRTLRSWGVR--VDEAFFL------------------------ 220 (264)
T ss_pred HHHHHHHHHHHHhcCCCCCceEEEEEEcCCCchhHHHHHHHHHcCCc--HhHHHHh------------------------
Confidence 3444455555544 378999998765544444 4555654 3332221
Q ss_pred ccccCCCCchHHHHHHHHHhcCCCCceEEEEcCCCCCccccc
Q 044617 145 CNLCPSNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTL 186 (265)
Q Consensus 145 ~~~~~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~ 186 (265)
.|..|..+++.+. .=+++.|...-++.|.
T Consensus 221 -----gG~~K~~vL~~~~--------phIFFDDQ~~H~~~a~ 249 (264)
T PF06189_consen 221 -----GGLPKGPVLKAFR--------PHIFFDDQDGHLESAS 249 (264)
T ss_pred -----CCCchhHHHHhhC--------CCEeecCchhhhhHhh
Confidence 1344776666543 3578899988887773
No 230
>KOG0208 consensus Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=74.18 E-value=20 Score=35.56 Aligned_cols=51 Identities=8% Similarity=0.115 Sum_probs=43.2
Q ss_pred CCCCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCcccccceEEe
Q 044617 69 QCPLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYT 119 (265)
Q Consensus 69 ~~~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~~i~~ 119 (265)
..++.+..+.+|+.|++.+++.+.+|+......-.+.++.|+-.....++-
T Consensus 703 eNkLK~~T~~VI~eL~~AnIRtVMcTGDNllTaisVakeCgmi~p~~~v~~ 753 (1140)
T KOG0208|consen 703 ENKLKEETKRVIDELNRANIRTVMCTGDNLLTAISVAKECGMIEPQVKVII 753 (1140)
T ss_pred ecccccccHHHHHHHHhhcceEEEEcCCchheeeehhhcccccCCCCeEEE
Confidence 457889999999999999999999999998888888888888666655543
No 231
>KOG0205 consensus Plasma membrane H+-transporting ATPase [Inorganic ion transport and metabolism]
Probab=73.58 E-value=8.3 Score=36.45 Aligned_cols=95 Identities=16% Similarity=0.115 Sum_probs=60.5
Q ss_pred CChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCcccccce---EEecC------------ceecCCCceEEeecc
Q 044617 72 LDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSE---IYTNP------------TYVDEQGRLRILPYH 136 (265)
Q Consensus 72 ~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~~---i~~~~------------~~~d~~~~~~~~~~~ 136 (265)
+..+..+.+++....|..+-.+|+.........-+++|+..-+.. .++.. .....+|...++|.
T Consensus 493 prhdsa~tirral~lGv~VkmitgdqlaI~keTgrrlgmgtnmypss~llG~~~~~~~~~~~v~elie~adgfAgVfpe- 571 (942)
T KOG0205|consen 493 PRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGLGKDGSMPGSPVDELIEKADGFAGVFPE- 571 (942)
T ss_pred CccchHHHHHHHHhccceeeeecchHHHHHHhhhhhhccccCcCCchhhccCCCCCCCCCCcHHHHhhhccCccccCHH-
Confidence 456788899999999999999999888888877788876432111 11110 00000111111222
Q ss_pred ccccCCCcccccCCCCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccC
Q 044617 137 DSTLSHHGCNLCPSNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLK 187 (265)
Q Consensus 137 ~~~~kp~~~~~~~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~ 187 (265)
.|.+.++.+.++- ..|-+.||+.||..+.++
T Consensus 572 ----------------hKy~iV~~Lq~r~----hi~gmtgdgvndapaLKk 602 (942)
T KOG0205|consen 572 ----------------HKYEIVKILQERK----HIVGMTGDGVNDAPALKK 602 (942)
T ss_pred ----------------HHHHHHHHHhhcC----ceecccCCCcccchhhcc
Confidence 2677777766653 467899999999988865
No 232
>COG0731 Fe-S oxidoreductases [Energy production and conversion]
Probab=72.84 E-value=6.4 Score=33.51 Aligned_cols=35 Identities=11% Similarity=0.080 Sum_probs=30.0
Q ss_pred CCCCChhHHHHHHHHHHcC-CcEEEEeCCCHHHHHH
Q 044617 69 QCPLDSHVAAAIKSAHSLG-CDLKIVSDANQFYIET 103 (265)
Q Consensus 69 ~~~~~~g~~e~l~~l~~~g-~~~~ivS~~~~~~i~~ 103 (265)
..+++|...++|+.+++.| ++++|+||+..+.+..
T Consensus 90 EPTLy~~L~elI~~~k~~g~~~tflvTNgslpdv~~ 125 (296)
T COG0731 90 EPTLYPNLGELIEEIKKRGKKTTFLVTNGSLPDVLE 125 (296)
T ss_pred CcccccCHHHHHHHHHhcCCceEEEEeCCChHHHHH
Confidence 4688999999999999999 7999999999844444
No 233
>KOG2469 consensus IMP-GMP specific 5'-nucleotidase [Nucleotide transport and metabolism]
Probab=70.73 E-value=16 Score=32.44 Aligned_cols=117 Identities=15% Similarity=0.192 Sum_probs=64.5
Q ss_pred hHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhc---CcccccceEEecC---ceecCCCc--eEEee-----ccccccC
Q 044617 75 HVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHH---GLLGCFSEIYTNP---TYVDEQGR--LRILP-----YHDSTLS 141 (265)
Q Consensus 75 g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~---gl~~~f~~i~~~~---~~~d~~~~--~~~~~-----~~~~~~k 141 (265)
....++..+++.|-++.++||+.-.+....+..+ ++..+|+.++... ..+. .+. ..+.+ ......+
T Consensus 202 ~~v~~l~~~r~sGKk~fl~Tns~~~ytd~~mt~~~~~dW~~yfd~v~~~a~Kp~ff~-e~~vlreV~t~~g~l~~g~~~~ 280 (424)
T KOG2469|consen 202 TIVPLLSMLRDSGKKTFLHTNSDWDYTDIFMAFHYGFDWETYFDLVETRAAKPGFFH-EGTVLREVEPQEGLLKNGDNTG 280 (424)
T ss_pred ccccchHHHHhhccceEEeeccccchhhHHHHHHhCCCcceeEEEEEEeccCCcccc-ccceeeeeccccccccccccCC
Confidence 3444889999999999999999888888877653 5677787655431 1111 110 00000 0111112
Q ss_pred CCcccccCCCCchHHHHHHHHHhcCCCCceEEEEcCCC-CCccccc-CCCCCCeeee
Q 044617 142 HHGCNLCPSNLCKGFVLDHVCTSFGCGKQRFIYLGDGR-GDFCPTL-KLRDCDFVMP 196 (265)
Q Consensus 142 p~~~~~~~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~-~Di~~a~-~~~~~~~~~~ 196 (265)
|... .+.-.+.....+++.++.-..+++++||.. .|+.-.+ +.+..++.++
T Consensus 281 p~e~----~~~ySggs~~~~~~~l~~~g~diLy~gdHi~~dvl~skk~~~wrt~lv~ 333 (424)
T KOG2469|consen 281 PLEQ----GGVYSGGSLKTVETSMKVKGKDILYGGDHIWGDVLVSKKRRGWRTVLVA 333 (424)
T ss_pred cchh----cccCCcchHHHHHHHhcccccceeecccceeeeEEecceecceEEEEEe
Confidence 2111 112223334444555555557999999995 7775443 3344445555
No 234
>PF04312 DUF460: Protein of unknown function (DUF460); InterPro: IPR007408 This is an archaeal protein of unknown function.
Probab=69.69 E-value=17 Score=27.15 Aligned_cols=36 Identities=11% Similarity=0.118 Sum_probs=27.6
Q ss_pred hHHHHHHHHHHcCCcEEEEeCC--CHHHHHHHHHhcCc
Q 044617 75 HVAAAIKSAHSLGCDLKIVSDA--NQFYIETIMEHHGL 110 (265)
Q Consensus 75 g~~e~l~~l~~~g~~~~ivS~~--~~~~i~~~l~~~gl 110 (265)
...++++++.+.|.++.|+|.- ....++.+...++-
T Consensus 64 ~~~evi~~I~~~G~PviVAtDV~p~P~~V~Kia~~f~A 101 (138)
T PF04312_consen 64 SRSEVIEWISEYGKPVIVATDVSPPPETVKKIARSFNA 101 (138)
T ss_pred CHHHHHHHHHHcCCEEEEEecCCCCcHHHHHHHHHhCC
Confidence 3456788889999999999864 56678887777664
No 235
>PF06014 DUF910: Bacterial protein of unknown function (DUF910); InterPro: IPR009256 This family consists of several short bacterial proteins of unknown function.; PDB: 2NN4_A.
Probab=68.78 E-value=0.63 Score=29.48 Aligned_cols=25 Identities=28% Similarity=0.434 Sum_probs=16.5
Q ss_pred HHHHHHHhcCCCCceEEEEcCCCCCcccc
Q 044617 157 VLDHVCTSFGCGKQRFIYLGDGRGDFCPT 185 (265)
Q Consensus 157 ~i~~~~~~~gi~~~~~v~vGD~~~Di~~a 185 (265)
-+..+++++|+ .+|+||...|++++
T Consensus 6 DVqQLLK~fG~----~IY~gdr~~DielM 30 (62)
T PF06014_consen 6 DVQQLLKKFGI----IIYVGDRLWDIELM 30 (62)
T ss_dssp HHHHHHHTTS---------S-HHHHHHHH
T ss_pred HHHHHHHHCCE----EEEeCChHHHHHHH
Confidence 37789999985 89999999999887
No 236
>KOG1359 consensus Glycine C-acetyltransferase/2-amino-3-ketobutyrate-CoA ligase [Amino acid transport and metabolism]
Probab=68.34 E-value=18 Score=30.84 Aligned_cols=132 Identities=10% Similarity=0.068 Sum_probs=75.9
Q ss_pred CCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHH-HHhcCcccccceEEecCceecCCCceEEeeccccccCCCcccccC
Q 044617 71 PLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETI-MEHHGLLGCFSEIYTNPTYVDEQGRLRILPYHDSTLSHHGCNLCP 149 (265)
Q Consensus 71 ~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~-l~~~gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp~~~~~~~ 149 (265)
-...|-++++..|++++ +-++.||...+.+-.. .+.+.+ +..+...+. ...
T Consensus 271 Gyttgp~~li~llrqr~-RpylFSnslppavV~~a~ka~dl------lm~s~~~i~--------~~~------------- 322 (417)
T KOG1359|consen 271 GYTTGPKPLISLLRQRS-RPYLFSNSLPPAVVGMAAKAYDL------LMVSSKEIQ--------SRQ------------- 322 (417)
T ss_pred CCccCChhHHHHHHhcC-CceeecCCCChhhhhhhHHHHHH------HHhhHHHHH--------HHH-------------
Confidence 34567788999999986 6677888866544332 223222 111100000 000
Q ss_pred CCCchHHHHHHHHHhcCCC------CceEEEEcCCCCCcccccCCCCCCeeeecCCCchhhhhhcCCCeeeEEEEeCCCH
Q 044617 150 SNLCKGFVLDHVCTSFGCG------KQRFIYLGDGRGDFCPTLKLRDCDFVMPRKNYPLWDRICSNPMLIKAKVHEWSSA 223 (265)
Q Consensus 150 ~~~~K~~~i~~~~~~~gi~------~~~~v~vGD~~~Di~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (265)
.+.+.++..++..|++ |---+++||..--..||..+--.++.+....|+.. +++...+...+..-.+.
T Consensus 323 ---a~~qrfr~~me~aGftIsg~~hPI~pv~lGda~lA~~~ad~lLk~Gi~Vigfs~PvV---P~gkariRVqiSAaHt~ 396 (417)
T KOG1359|consen 323 ---ANTQRFREFMEAAGFTISGASHPICPVMLGDARLASKMADELLKRGIYVIGFSYPVV---PKGKARIRVQISAAHTE 396 (417)
T ss_pred ---HHHHHHHHHHHhcCceecCCCCCccceecccHHHHHHHHHHHHhcCceEEeecCCcC---CCCceEEEEEEehhcCH
Confidence 1456677777777743 44578999987666666544445555655545442 22222344445555788
Q ss_pred HHHHHHHHHHHHh
Q 044617 224 EELKKILLHLIGA 236 (265)
Q Consensus 224 ~el~~~l~~~~~~ 236 (265)
+||..+++.+.+-
T Consensus 397 edid~~i~Af~~v 409 (417)
T KOG1359|consen 397 EDIDRLIEAFSEV 409 (417)
T ss_pred HHHHHHHHHHHHH
Confidence 8898888877654
No 237
>PRK13717 conjugal transfer protein TrbI; Provisional
Probab=68.11 E-value=9.3 Score=27.96 Aligned_cols=12 Identities=25% Similarity=0.556 Sum_probs=8.8
Q ss_pred ceEEEEecCCCC
Q 044617 3 DVVVVFDFDRTL 14 (265)
Q Consensus 3 ~k~iifD~DGTL 14 (265)
+..|.|||.+||
T Consensus 45 P~iV~FDmK~Tl 56 (128)
T PRK13717 45 PVTAAFNMKQTV 56 (128)
T ss_pred CeEEEEehHHHH
Confidence 566777777777
No 238
>KOG0323 consensus TFIIF-interacting CTD phosphatases, including NLI-interacting factor [Transcription]
Probab=66.87 E-value=11 Score=35.65 Aligned_cols=51 Identities=20% Similarity=0.252 Sum_probs=41.3
Q ss_pred CCCCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCccc-ccc-eEEec
Q 044617 69 QCPLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLG-CFS-EIYTN 120 (265)
Q Consensus 69 ~~~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~-~f~-~i~~~ 120 (265)
.+++.|++.++|+.+.+. +.++|.|-+.+.|+..+++-+.-.. +|. .|++.
T Consensus 199 ~vKlRP~~~efL~~~skl-femhVyTmg~R~YA~~i~~liDP~~~lF~dRIisr 251 (635)
T KOG0323|consen 199 LVKLRPFVHEFLKEANKL-FEMHVYTMGTRDYALEIAKLIDPEGKYFGDRIISR 251 (635)
T ss_pred EEEeCccHHHHHHHHHhh-ceeEEEeccchHHHHHHHHHhCCCCccccceEEEe
Confidence 457899999999999986 9999999999999999998876542 444 35553
No 239
>KOG3107 consensus Predicted haloacid dehalogenase-like hydrolase (eyes absent) [General function prediction only]
Probab=65.45 E-value=12 Score=32.98 Aligned_cols=37 Identities=22% Similarity=0.388 Sum_probs=29.9
Q ss_pred CchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccCCC
Q 044617 152 LCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLR 189 (265)
Q Consensus 152 ~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~ 189 (265)
.+|..-++++.+++|- .-..++||||.---.+||++.
T Consensus 408 iGKescFerI~~RFg~-K~~yvvIgdG~eee~aAK~ln 444 (468)
T KOG3107|consen 408 IGKESCFERIQSRFGR-KVVYVVIGDGVEEEQAAKALN 444 (468)
T ss_pred ccHHHHHHHHHHHhCC-ceEEEEecCcHHHHHHHHhhC
Confidence 4599999999999996 347789999987777886643
No 240
>PLN02588 glycerol-3-phosphate acyltransferase
Probab=63.45 E-value=84 Score=29.11 Aligned_cols=52 Identities=13% Similarity=0.068 Sum_probs=32.5
Q ss_pred CChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHh-cCcccccceEEecCceecCCCceEE
Q 044617 72 LDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEH-HGLLGCFSEIYTNPTYVDEQGRLRI 132 (265)
Q Consensus 72 ~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~-~gl~~~f~~i~~~~~~~d~~~~~~~ 132 (265)
+.+++-+++ ++-+ +-+++|..++-.++..+++ +| .|.|++.+..+ -.|..++
T Consensus 134 v~~e~~~v~---~~~~-~~~vv~~~PrvMve~Flkeyl~----~d~V~g~El~~-~~g~~tG 186 (525)
T PLN02588 134 VGLEMFQVL---KRGG-KRVGVSDLPQVMIDVFLRDYLE----IEVVVGRDMKM-VGGYYLG 186 (525)
T ss_pred cCHHHHHHH---hhcC-cEEEEecCCHHHHHHHHHHhcC----cceEeeeeEEE-eeeEEEE
Confidence 344444444 3323 5666777999999999987 46 45788877655 2455443
No 241
>PRK13762 tRNA-modifying enzyme; Provisional
Probab=59.23 E-value=19 Score=31.19 Aligned_cols=31 Identities=16% Similarity=0.172 Sum_probs=26.8
Q ss_pred CCCCChhHHHHHHHHHHcCCcEEEEeCCCHH
Q 044617 69 QCPLDSHVAAAIKSAHSLGCDLKIVSDANQF 99 (265)
Q Consensus 69 ~~~~~~g~~e~l~~l~~~g~~~~ivS~~~~~ 99 (265)
...++|.+.++++.++++|+.+.|+||+...
T Consensus 140 EPlL~p~l~eli~~~k~~Gi~~~L~TNG~~~ 170 (322)
T PRK13762 140 EPTLYPYLPELIEEFHKRGFTTFLVTNGTRP 170 (322)
T ss_pred cccchhhHHHHHHHHHHcCCCEEEECCCCCH
Confidence 3456889999999999999999999999653
No 242
>PF04413 Glycos_transf_N: 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase); InterPro: IPR007507 This is a domain found in proteins that transfer activated sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. Proteins bearing this domain transfer UDP, ADP, GDP or CMP linked sugars. This region is flanked at the N terminus by a signal peptide and at the C terminus by a glycosyl transferase group 1 domain (IPR001296 from INTERPRO). The eukaryotic glycogen synthases may be distant members of this bacterial family [].; GO: 0005529 sugar binding, 0016740 transferase activity, 0005975 carbohydrate metabolic process; PDB: 2XCI_A 2XCU_B.
Probab=57.97 E-value=14 Score=29.19 Aligned_cols=71 Identities=15% Similarity=0.097 Sum_probs=26.9
Q ss_pred HHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcC-----cccccceEEecCceecCCCceEEeeccccccCCCcccccCCCC
Q 044617 78 AAIKSAHSLGCDLKIVSDANQFYIETIMEHHG-----LLGCFSEIYTNPTYVDEQGRLRILPYHDSTLSHHGCNLCPSNL 152 (265)
Q Consensus 78 e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~g-----l~~~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp~~~~~~~~~~ 152 (265)
.+|..++++|++++++.+......-.....+. +-..|+.|+..
T Consensus 109 nll~~a~~~~ip~~LvNarls~~s~~~~~~~~~~~r~~l~~f~~i~aq-------------------------------- 156 (186)
T PF04413_consen 109 NLLREAKRRGIPVVLVNARLSERSFRRYRRFPFLFRPLLSRFDRILAQ-------------------------------- 156 (186)
T ss_dssp HHHHH-----S-EEEEEE--------------HHHHHHGGG-SEEEES--------------------------------
T ss_pred HHHHHHhhcCCCEEEEeeeeccccchhhhhhHHHHHHHHHhCCEEEEC--------------------------------
Confidence 57888899999999997765443222222111 11235555552
Q ss_pred chHHHHHHHHHhcCCCCceEEEEcCCCCCc
Q 044617 153 CKGFVLDHVCTSFGCGKQRFIYLGDGRGDF 182 (265)
Q Consensus 153 ~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di 182 (265)
.+.-.+-+.++|++++++...|+--.|.
T Consensus 157 --s~~da~r~~~lG~~~~~v~v~GnlKfd~ 184 (186)
T PF04413_consen 157 --SEADAERFRKLGAPPERVHVTGNLKFDQ 184 (186)
T ss_dssp --SHHHHHHHHTTT-S--SEEE---GGG--
T ss_pred --CHHHHHHHHHcCCCcceEEEeCcchhcc
Confidence 1223344667899999999999876665
No 243
>PF03332 PMM: Eukaryotic phosphomannomutase; InterPro: IPR005002 This enzyme (5.4.2.8 from EC) is involved in the synthesis of the GDP-mannose and dolichol-phosphate-mannose required for a number of critical mannosyl transfer reactions.; GO: 0004615 phosphomannomutase activity, 0019307 mannose biosynthetic process, 0005737 cytoplasm; PDB: 2I55_B 2I54_C 3F9R_A 2FUE_A 2FUC_A 2AMY_A 2Q4R_A.
Probab=52.14 E-value=10 Score=30.70 Aligned_cols=62 Identities=24% Similarity=0.289 Sum_probs=35.5
Q ss_pred CCCCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccCCCCCCeeeecCCCchhhhhhcCCCeeeEEEEeCCCHHHHHH
Q 044617 149 PSNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRDCDFVMPRKNYPLWDRICSNPMLIKAKVHEWSSAEELKK 228 (265)
Q Consensus 149 ~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~ 228 (265)
|.|.+|...++++.+.. .++++||||... . |+.|+.+... +...-..+ .+|+|=.+
T Consensus 158 p~GwDKty~Lr~l~~~~---~~~I~FfGDkt~------p-GGNDyei~~~-----------~rt~g~~V---~~p~DT~~ 213 (220)
T PF03332_consen 158 PKGWDKTYCLRHLEDEG---FDEIHFFGDKTF------P-GGNDYEIFED-----------PRTIGHTV---TSPEDTIK 213 (220)
T ss_dssp ETT-SGGGGGGGTTTTT----SEEEEEESS-S------T-TSTTHHHHHS-----------TTSEEEE----SSHHHHHH
T ss_pred cCCccHHHHHHHHHhcc---cceEEEEehhcc------C-CCCCceeeec-----------CCccEEEe---CCHHHHHH
Confidence 45667888888876643 589999999631 0 2222222111 11122345 88999888
Q ss_pred HHHHHH
Q 044617 229 ILLHLI 234 (265)
Q Consensus 229 ~l~~~~ 234 (265)
.|++++
T Consensus 214 ~l~~l~ 219 (220)
T PF03332_consen 214 QLKELF 219 (220)
T ss_dssp HHHHHH
T ss_pred HHHHHh
Confidence 888876
No 244
>PF03193 DUF258: Protein of unknown function, DUF258; InterPro: IPR004881 This entry contains Escherichia coli (strain K12) RsgA, which may play a role in 30S ribosomal subunit biogenesis. RsgA is an unusual circulary permuted GTPase that catalyzes rapid hydrolysis of GTP with a slow catalytic turnover. It is dispensible for viability, but important for overall fitness. The intrinsic GTPase activity is stimulated by the presence of 30S (160-fold increase in kcat) or 70S (96 fold increase in kcat) ribosomes []. The GTPase is inhibited by aminoglycoside antibiotics such as neomycin and paromycin [] streptomycin and spectinomycin []. This inhibition is not due to competition for binding sites on the 30S or 70S ribosome []. ; GO: 0003924 GTPase activity, 0005525 GTP binding; PDB: 2YKR_W 2YV5_A 1T9H_A 2RCN_A 4A2I_V 1U0L_B.
Probab=50.44 E-value=76 Score=24.45 Aligned_cols=58 Identities=16% Similarity=0.086 Sum_probs=41.1
Q ss_pred HHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCcccccceEEecCceecCCCceEEeeccccccCCCcccccCCCCchHH
Q 044617 77 AAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRILPYHDSTLSHHGCNLCPSNLCKGF 156 (265)
Q Consensus 77 ~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp~~~~~~~~~~~K~~ 156 (265)
.+.++..++.|++++.+|......++.+.+.+.=. ...+.+ +.|++|..
T Consensus 2 ~~~~~~y~~~gy~v~~~S~~~~~g~~~l~~~l~~k--~~vl~G-----------------------------~SGvGKSS 50 (161)
T PF03193_consen 2 EELLEQYEKLGYPVFFISAKTGEGIEELKELLKGK--TSVLLG-----------------------------QSGVGKSS 50 (161)
T ss_dssp HHHHHHHHHTTSEEEE-BTTTTTTHHHHHHHHTTS--EEEEEC-----------------------------STTSSHHH
T ss_pred HHHHHHHHHcCCcEEEEeCCCCcCHHHHHHHhcCC--EEEEEC-----------------------------CCCCCHHH
Confidence 46788889999999999998777777776665421 112222 34778999
Q ss_pred HHHHHHHhc
Q 044617 157 VLDHVCTSF 165 (265)
Q Consensus 157 ~i~~~~~~~ 165 (265)
.++.+....
T Consensus 51 LiN~L~~~~ 59 (161)
T PF03193_consen 51 LINALLPEA 59 (161)
T ss_dssp HHHHHHTSS
T ss_pred HHHHHHhhc
Confidence 999999764
No 245
>PF03332 PMM: Eukaryotic phosphomannomutase; InterPro: IPR005002 This enzyme (5.4.2.8 from EC) is involved in the synthesis of the GDP-mannose and dolichol-phosphate-mannose required for a number of critical mannosyl transfer reactions.; GO: 0004615 phosphomannomutase activity, 0019307 mannose biosynthetic process, 0005737 cytoplasm; PDB: 2I55_B 2I54_C 3F9R_A 2FUE_A 2FUC_A 2AMY_A 2Q4R_A.
Probab=50.28 E-value=26 Score=28.49 Aligned_cols=43 Identities=12% Similarity=0.230 Sum_probs=29.6
Q ss_pred HHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCcccccceEEe
Q 044617 76 VAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYT 119 (265)
Q Consensus 76 ~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~~i~~ 119 (265)
+.++|..|+++ +.+++||++...-+...+....+...|+.+++
T Consensus 1 M~~~L~~L~~~-~~vgvVgGsd~~k~~eQl~~~~~~~~fdy~f~ 43 (220)
T PF03332_consen 1 MAELLQKLRKK-VPVGVVGGSDLPKIQEQLGGDDVLDNFDYVFP 43 (220)
T ss_dssp HHHHHHHHHTT-SEEEEEESS-HHHHHHHHSTTTHHHH-SEEEE
T ss_pred CHHHHHHHHhc-CeEEEEcchhHHHHHHHHcccchHhhCCeeec
Confidence 46889999985 99999999988877766642233445666665
No 246
>PRK10076 pyruvate formate lyase II activase; Provisional
Probab=48.50 E-value=45 Score=26.97 Aligned_cols=37 Identities=5% Similarity=0.074 Sum_probs=27.4
Q ss_pred CCChh-HHHHHHHHHHcCCcEEEEeCCCHH--HHHHHHHh
Q 044617 71 PLDSH-VAAAIKSAHSLGCDLKIVSDANQF--YIETIMEH 107 (265)
Q Consensus 71 ~~~~g-~~e~l~~l~~~g~~~~ivS~~~~~--~i~~~l~~ 107 (265)
.+.++ +.++++.++++|+.+++.||+... ....++..
T Consensus 50 llq~~fl~~l~~~~k~~gi~~~leTnG~~~~~~~~~l~~~ 89 (213)
T PRK10076 50 LMQAEFATRFLQRLRLWGVSCAIETAGDAPASKLLPLAKL 89 (213)
T ss_pred HcCHHHHHHHHHHHHHcCCCEEEECCCCCCHHHHHHHHHh
Confidence 35666 579999999999999999999543 44444443
No 247
>TIGR02495 NrdG2 anaerobic ribonucleoside-triphosphate reductase activating protein. This enzyme is a member of the radical-SAM family (pfam04055). It is often gene clustered with the class III (anaerobic) ribonucleotide triphosphate reductase (NrdD, TIGR02487) and presumably fulfills the identical function as NrdG which utilizes S-adenosyl methionine, an iron-sulfur cluster and a reductant (dihydroflavodoxin) to produce a glycine-centered radical in NrdD.
Probab=47.19 E-value=47 Score=25.90 Aligned_cols=30 Identities=13% Similarity=0.301 Sum_probs=25.2
Q ss_pred CCCChhHHHHHHHHHHcCCcEEEEeCCCHH
Q 044617 70 CPLDSHVAAAIKSAHSLGCDLKIVSDANQF 99 (265)
Q Consensus 70 ~~~~~g~~e~l~~l~~~g~~~~ivS~~~~~ 99 (265)
..+++.+.++++.+++.|+.+.+.||+...
T Consensus 73 Pll~~~l~~li~~~~~~g~~v~i~TNg~~~ 102 (191)
T TIGR02495 73 PTLQAGLPDFLRKVRELGFEVKLDTNGSNP 102 (191)
T ss_pred ccCcHhHHHHHHHHHHCCCeEEEEeCCCCH
Confidence 345678889999999999999999999743
No 248
>TIGR03365 Bsubt_queE 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE. This uncharacterized enzyme, designated QueE, participates in the biosynthesis, from GTP, of 7-cyano-7-deazaguanosine, also called preQ0 because in many species it is a precursor of queuosine. In most Archaea, it is instead the precursor of a different tRNA modified base, archaeosine.
Probab=46.49 E-value=23 Score=29.19 Aligned_cols=28 Identities=11% Similarity=0.260 Sum_probs=25.0
Q ss_pred CChhHHHHHHHHHHcCCcEEEEeCCCHH
Q 044617 72 LDSHVAAAIKSAHSLGCDLKIVSDANQF 99 (265)
Q Consensus 72 ~~~g~~e~l~~l~~~g~~~~ivS~~~~~ 99 (265)
++++..++++.+++.|+++.|.||+...
T Consensus 85 l~~~l~~li~~l~~~g~~v~leTNGtl~ 112 (238)
T TIGR03365 85 LQKPLGELIDLGKAKGYRFALETQGSVW 112 (238)
T ss_pred hhHhHHHHHHHHHHCCCCEEEECCCCCc
Confidence 4578999999999999999999999764
No 249
>PF00875 DNA_photolyase: DNA photolyase from Prosite.; InterPro: IPR006050 DNA photolyases are enzymes that bind to DNA containing pyrimidine dimers: on absorption of visible light, they catalyse dimer splitting into the constituent monomers, a process called photoreactivation []. This is a DNA repair mechanism, repairing mismatched pyrimidine dimers induced by exposure to ultra-violet light []. The precise mechanisms involved in substrate binding, conversion of light energy to the mechanical energy needed to rupture the cyclobutane ring, and subsequent release of the product are uncertain []. Analysis of DNA lyases has revealed the presence of an intrinsic chromophore, all monomers containing a reduced FAD moiety, and, in addition, either a reduced pterin or 8-hydroxy-5-diazaflavin as a second chromophore [, ]. Either chromophore may act as the primary photon acceptor, peak absorptions occurring in the blue region of the spectrum and in the UV-B region, at a wavelength around 290nm []. This domain binds a light harvesting cofactor.; GO: 0003913 DNA photolyase activity, 0006281 DNA repair; PDB: 3UMV_A 2J07_A 1IQU_A 2J09_A 2J08_A 1IQR_A 1DNP_A 3FY4_B 2VTB_A 2J4D_B ....
Probab=45.82 E-value=36 Score=25.95 Aligned_cols=44 Identities=18% Similarity=0.237 Sum_probs=35.9
Q ss_pred ChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCcccccceEEec
Q 044617 73 DSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTN 120 (265)
Q Consensus 73 ~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~~i~~~ 120 (265)
.++..++=+.|++.|+++.+..+.....+..+++.+++. .|+++
T Consensus 52 ~~sL~~L~~~L~~~g~~L~v~~g~~~~~l~~l~~~~~~~----~V~~~ 95 (165)
T PF00875_consen 52 LESLADLQESLRKLGIPLLVLRGDPEEVLPELAKEYGAT----AVYFN 95 (165)
T ss_dssp HHHHHHHHHHHHHTTS-EEEEESSHHHHHHHHHHHHTES----EEEEE
T ss_pred HHHHHHHHHHHHhcCcceEEEecchHHHHHHHHHhcCcC----eeEec
Confidence 466777778899999999999999999999999998854 67765
No 250
>PF02593 dTMP_synthase: Thymidylate synthase; InterPro: IPR003745 This entry describes proteins of unknown function.
Probab=44.64 E-value=1.1e+02 Score=24.92 Aligned_cols=87 Identities=15% Similarity=0.106 Sum_probs=58.8
Q ss_pred CCCChhHH-HHHHHHHHcCCcEEEEeCCCHH-----HHHHHHHhcCcccccceEEecCceecCCCceEEeeccccccCCC
Q 044617 70 CPLDSHVA-AAIKSAHSLGCDLKIVSDANQF-----YIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRILPYHDSTLSHH 143 (265)
Q Consensus 70 ~~~~~g~~-e~l~~l~~~g~~~~ivS~~~~~-----~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp~ 143 (265)
..++|+.. ++.+.+++.|++.+|+...... .++..++.+|+.-.|...+++
T Consensus 58 y~lHPDl~~~l~~~~~e~g~kavIvp~~~~~~g~~~~lk~~~e~~gi~~~~P~~~Cs----------------------- 114 (217)
T PF02593_consen 58 YGLHPDLTYELPEIAKEAGVKAVIVPSESPKPGLRRQLKKQLEEFGIEVEFPKPFCS----------------------- 114 (217)
T ss_pred eccCchhHHHHHHHHHHcCCCEEEEecCCCccchHHHHHHHHHhcCceeecCccccc-----------------------
Confidence 46778766 6678888899999999766555 788888888876555555553
Q ss_pred cccccCCCCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccc
Q 044617 144 GCNLCPSNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPT 185 (265)
Q Consensus 144 ~~~~~~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a 185 (265)
....+-..+..+++.+|-+.=++..=+|...|+.-.
T Consensus 115 ------L~~~~~p~i~~F~~~fGkP~~ei~v~~~~I~~V~Vl 150 (217)
T PF02593_consen 115 ------LEENGNPQIDEFAEYFGKPKVEIEVENGKIKDVKVL 150 (217)
T ss_pred ------cCCCCChhHHHHHHHhCCceEEEEecCCcEEEEEEE
Confidence 111244568888888986654444434456676655
No 251
>PF06437 ISN1: IMP-specific 5'-nucleotidase; InterPro: IPR009453 The Saccharomyces cerevisiae ISN1 (YOR155c) gene encodes an IMP-specific 5'-nucleotidase, which catalyses degradation of IMP to inosine as part of the purine salvage pathway.; GO: 0000287 magnesium ion binding, 0016791 phosphatase activity, 0009117 nucleotide metabolic process
Probab=44.47 E-value=29 Score=30.62 Aligned_cols=32 Identities=22% Similarity=0.327 Sum_probs=26.1
Q ss_pred hHHHHHHHHHhc----CCCCceEEEEcCC-----CCCcccc
Q 044617 154 KGFVLDHVCTSF----GCGKQRFIYLGDG-----RGDFCPT 185 (265)
Q Consensus 154 K~~~i~~~~~~~----gi~~~~~v~vGD~-----~~Di~~a 185 (265)
|..++..+.+-+ ++.+++++.|||- .||..+-
T Consensus 350 Ks~GV~~lQ~y~~~~~~i~~~~tLHVGDQF~s~GaNDfkaR 390 (408)
T PF06437_consen 350 KSLGVRALQKYFDPEGGIKPSETLHVGDQFLSAGANDFKAR 390 (408)
T ss_pred cHHhHHHHHHHHHhccCCCccceeeehhhhhccCCcchhhh
Confidence 788888777777 7999999999994 4888554
No 252
>COG4483 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=43.64 E-value=6.3 Score=25.10 Aligned_cols=26 Identities=19% Similarity=0.333 Sum_probs=22.2
Q ss_pred HHHHHHHhcCCCCceEEEEcCCCCCccccc
Q 044617 157 VLDHVCTSFGCGKQRFIYLGDGRGDFCPTL 186 (265)
Q Consensus 157 ~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~ 186 (265)
-++.+++++|+ ++++||...|+++++
T Consensus 6 DVqQlLK~~G~----ivyfg~r~~~iemm~ 31 (68)
T COG4483 6 DVQQLLKKFGI----IVYFGKRLYDIEMMQ 31 (68)
T ss_pred HHHHHHHHCCe----eeecCCHHHHHHHHH
Confidence 37788999975 899999999999883
No 253
>TIGR02744 TrbI_Ftype type-F conjugative transfer system protein TrbI. This protein is an essential component of the F-type conjugative transfer sytem for plasmid DNA transfer and has been shown to be localized to the periplasm.
Probab=42.74 E-value=79 Score=22.76 Aligned_cols=11 Identities=55% Similarity=0.869 Sum_probs=6.9
Q ss_pred eEEEEecCCCC
Q 044617 4 VVVVFDFDRTL 14 (265)
Q Consensus 4 k~iifD~DGTL 14 (265)
..|.|||.+||
T Consensus 33 ~iV~fdmk~tl 43 (112)
T TIGR02744 33 VTVAFDMKQTL 43 (112)
T ss_pred eEEEEecHHHH
Confidence 45567776666
No 254
>TIGR02826 RNR_activ_nrdG3 anaerobic ribonucleoside-triphosphate reductase activating protein. Members of this family represent a set of proteins related to, yet architecturally different from, the activating protein for the glycine radical-containing, oxygen-sensitive ribonucleoside-triphosphate reductase (RNR) as described in model TIGR02491. Members of this family are found paired with members of a similarly divergent set of anaerobic ribonucleoside-triphosphate reductases. Identification of this protein as an RNR activitating protein is partly from pairing with a candidate RNR. It is further supported by our finding that upstream of these operons are examples of a conserved regulatory element (described Rodionov and Gelfand) that is found in nearly all bacteria and that occurs specifically upstream of operons for all three classes of RNR genes.
Probab=41.50 E-value=72 Score=24.11 Aligned_cols=26 Identities=8% Similarity=0.060 Sum_probs=22.7
Q ss_pred ChhHHHHHHHHHHcCCcEEEEeCCCH
Q 044617 73 DSHVAAAIKSAHSLGCDLKIVSDANQ 98 (265)
Q Consensus 73 ~~g~~e~l~~l~~~g~~~~ivS~~~~ 98 (265)
.+.+.++++.++++|+++.+.||...
T Consensus 74 ~~~l~~ll~~lk~~Gl~i~l~Tg~~~ 99 (147)
T TIGR02826 74 REALLSLLKIFKEKGLKTCLYTGLEP 99 (147)
T ss_pred HHHHHHHHHHHHHCCCCEEEECCCCC
Confidence 46788999999999999999998754
No 255
>PF04123 DUF373: Domain of unknown function (DUF373); InterPro: IPR007254 This archaeal family of unknown function is predicted to be an integral membrane protein with six transmembrane regions.
Probab=41.43 E-value=99 Score=27.11 Aligned_cols=28 Identities=29% Similarity=0.271 Sum_probs=21.3
Q ss_pred HHHHHHHHhcCCCCceEEEEcCCCCCcccc
Q 044617 156 FVLDHVCTSFGCGKQRFIYLGDGRGDFCPT 185 (265)
Q Consensus 156 ~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a 185 (265)
+.+..+++++ +|+.++.|.||..|-...
T Consensus 88 ~qld~vl~~~--~~~~~i~VsDGaeDE~vl 115 (344)
T PF04123_consen 88 EQLDEVLSKF--DPDSAIVVSDGAEDERVL 115 (344)
T ss_pred HHHHHHHHhC--CCCEEEEEecChhhhhhh
Confidence 4466666665 567999999999998655
No 256
>TIGR00221 nagA N-acetylglucosamine-6-phosphate deacetylase.
Probab=40.10 E-value=1.2e+02 Score=26.90 Aligned_cols=34 Identities=9% Similarity=0.077 Sum_probs=27.4
Q ss_pred ChhHHHHHHHHHHcCCcEEEE-eCCCHHHHHHHHH
Q 044617 73 DSHVAAAIKSAHSLGCDLKIV-SDANQFYIETIME 106 (265)
Q Consensus 73 ~~g~~e~l~~l~~~g~~~~iv-S~~~~~~i~~~l~ 106 (265)
.++..+++++|+++|+.+.+- |+...+.+...++
T Consensus 176 ~~~~~~~i~~l~~~gi~vs~GHs~A~~~~~~~a~~ 210 (380)
T TIGR00221 176 EDQHFELIRHLKDAGIIVSAGHTNATYELAKAAFK 210 (380)
T ss_pred CCChHHHHHHHHHCCeEEEeeCCCCCHHHHHHHHH
Confidence 568999999999999998887 7777776666544
No 257
>cd05008 SIS_GlmS_GlmD_1 SIS (Sugar ISomerase) domain repeat 1 found in Glucosamine 6-phosphate synthase (GlmS) and Glucosamine-6-phosphate deaminase (GlmD). The SIS domain is found in many phosphosugar isomerases and phosphosugar binding proteins. GlmS contains a N-terminal glutaminase domain and two C-terminal SIS domains and catalyzes the first step in hexosamine metabolism, converting fructose 6-phosphate into glucosamine 6-phosphate using glutamine as nitrogen source. The glutaminase domain hydrolyzes glutamine to glutamate and ammonia. Ammonia is transferred through a channel to the isomerase domain for glucosamine 6-phosphate synthesis. The end product of the pathway is N-acetylglucosamine, which plays multiple roles in eukaryotic cells including being a building block of bacterial and fungal cell walls. In the absence of glutamine, GlmS catalyzes the isomerization of fructose 6-phosphate into glucose 6- phosphate (PGI-like activity). Glucosamine-6-phosphate deaminase (GlmD) cont
Probab=38.58 E-value=52 Score=23.52 Aligned_cols=32 Identities=13% Similarity=0.129 Sum_probs=25.4
Q ss_pred CChhHHHHHHHHHHcCCcEEEEeCCCHHHHHH
Q 044617 72 LDSHVAAAIKSAHSLGCDLKIVSDANQFYIET 103 (265)
Q Consensus 72 ~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~ 103 (265)
-.+++.+.++.++++|.+++.+|+.....+..
T Consensus 58 ~t~e~~~~~~~a~~~g~~vi~iT~~~~s~la~ 89 (126)
T cd05008 58 ETADTLAALRLAKEKGAKTVAITNVVGSTLAR 89 (126)
T ss_pred CCHHHHHHHHHHHHcCCeEEEEECCCCChHHH
Confidence 35678899999999999999999876544443
No 258
>cd05014 SIS_Kpsf KpsF-like protein. KpsF is an arabinose-5-phosphate isomerase which contains SIS (Sugar ISomerase) domains. SIS domains are found in many phosphosugar isomerases and phosphosugar binding proteins. KpsF catalyzes the reversible reaction of ribulose 5-phosphate to arabinose 5-phosphate. This is the second step in the CMP-Kdo biosynthesis pathway.
Probab=38.52 E-value=42 Score=24.09 Aligned_cols=32 Identities=3% Similarity=0.053 Sum_probs=25.9
Q ss_pred CChhHHHHHHHHHHcCCcEEEEeCCCHHHHHH
Q 044617 72 LDSHVAAAIKSAHSLGCDLKIVSDANQFYIET 103 (265)
Q Consensus 72 ~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~ 103 (265)
-.+.+.+.++.++++|.+++.+|+.....+..
T Consensus 59 ~t~~~~~~~~~a~~~g~~vi~iT~~~~s~la~ 90 (128)
T cd05014 59 ETDELLNLLPHLKRRGAPIIAITGNPNSTLAK 90 (128)
T ss_pred CCHHHHHHHHHHHHCCCeEEEEeCCCCCchhh
Confidence 45789999999999999999999876554444
No 259
>PF13911 AhpC-TSA_2: AhpC/TSA antioxidant enzyme
Probab=37.35 E-value=1.1e+02 Score=21.59 Aligned_cols=39 Identities=21% Similarity=0.301 Sum_probs=29.9
Q ss_pred HHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCcccccceEEe
Q 044617 78 AAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYT 119 (265)
Q Consensus 78 e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~~i~~ 119 (265)
+....+++.|+++++|+-+....++...+..++. ++ +++
T Consensus 4 ~~~~~l~~~gv~lv~I~~g~~~~~~~f~~~~~~p--~~-ly~ 42 (115)
T PF13911_consen 4 RRKPELEAAGVKLVVIGCGSPEGIEKFCELTGFP--FP-LYV 42 (115)
T ss_pred HhHHHHHHcCCeEEEEEcCCHHHHHHHHhccCCC--Cc-EEE
Confidence 4567788899999999988886688888776664 44 554
No 260
>PF09269 DUF1967: Domain of unknown function (DUF1967); InterPro: IPR015349 The Obg family comprises a group of ancient P-loop small G proteins (GTPases) belonging to the TRAFAC (for translation factors) class and can be subdivided into several distinct protein subfamilies []. OBG GTPases have been found in both prokaryotes and eukaryotes []. The structure of the OBG GTPase from Thermus thermophilus has been determined []. This entry represents a C-terminal domain found in certain OBG GTPases. This domain contains a four-stranded beta sheet and three alpha helices flanked by an additional beta strand. It is predominantly found in the bacterial GTP-binding protein Obg, and is functionally uncharacterised. ; GO: 0000166 nucleotide binding; PDB: 1UDX_A.
Probab=37.30 E-value=33 Score=22.20 Aligned_cols=25 Identities=16% Similarity=0.226 Sum_probs=18.7
Q ss_pred hHHHHHHHHHhcCCCCceEEEEcCC
Q 044617 154 KGFVLDHVCTSFGCGKQRFIYLGDG 178 (265)
Q Consensus 154 K~~~i~~~~~~~gi~~~~~v~vGD~ 178 (265)
+...+..++++.|+..-++|.|||-
T Consensus 41 ~~~Gv~~~L~~~G~~~GD~V~Ig~~ 65 (69)
T PF09269_consen 41 KKMGVEKALRKAGAKEGDTVRIGDY 65 (69)
T ss_dssp HHTTHHHHHHTTT--TT-EEEETTE
T ss_pred HHCCHHHHHHHcCCCCCCEEEEcCE
Confidence 5677888889999999999999984
No 261
>PF10307 DUF2410: Hypothetical protein (DUF2410); InterPro: IPR018812 This entry represents a family of proteins conserved in fungi whose function is not known. There are two characteristic sequence motifs, GGWW and TGR.
Probab=37.24 E-value=2.2e+02 Score=22.83 Aligned_cols=89 Identities=11% Similarity=0.188 Sum_probs=57.0
Q ss_pred ChhHHHHHHHH-HHcCCcEEEEeCCCH----HHHHHHHHhcCcccccceEEecCceecCCCceEEeeccccccCCCcccc
Q 044617 73 DSHVAAAIKSA-HSLGCDLKIVSDANQ----FYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRILPYHDSTLSHHGCNL 147 (265)
Q Consensus 73 ~~g~~e~l~~l-~~~g~~~~ivS~~~~----~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp~~~~~ 147 (265)
.+.+.++.+.- ++.+.-.+++||+.. ..+.++++..++. |+.|.-... ++...
T Consensus 56 Ne~Iv~la~~S~~~~dtltVLLTGR~e~~F~~lI~~ml~s~~L~--Fd~v~LKp~----~~~~~---------------- 113 (197)
T PF10307_consen 56 NENIVELARLSMQDPDTLTVLLTGRRESKFSSLIERMLASKGLE--FDAVCLKPE----NQRFS---------------- 113 (197)
T ss_pred hHHHHHHHHHhhcCCCeeEEEEeCCCchhHHHHHHHHHhcCCCC--ccEEEeCcc----cccCc----------------
Confidence 45677766444 344455677798764 4577777777877 777665321 01100
Q ss_pred cCCCCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccc
Q 044617 148 CPSNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPT 185 (265)
Q Consensus 148 ~~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a 185 (265)
+.=.-|-..+..+++.|. ..+++.++.|...=+..-
T Consensus 114 -sTm~fK~~~l~~ll~~Y~-~~~eI~IYeDR~~hvk~F 149 (197)
T PF10307_consen 114 -STMDFKQAFLEDLLHTYK-NAEEIRIYEDRPKHVKGF 149 (197)
T ss_pred -cccHHHHHHHHHHHHhcC-CCCEEEEEcCCHHHHHHH
Confidence 000118889999999987 778999999997666544
No 262
>PF09949 DUF2183: Uncharacterized conserved protein (DUF2183); InterPro: IPR019236 This domain, found in various bacterial and fungal proteins, has no known function.
Probab=36.64 E-value=46 Score=23.38 Aligned_cols=31 Identities=23% Similarity=0.345 Sum_probs=24.4
Q ss_pred chHHHHHHHHHhcCCCCceEEEEcCC-CCCcccc
Q 044617 153 CKGFVLDHVCTSFGCGKQRFIYLGDG-RGDFCPT 185 (265)
Q Consensus 153 ~K~~~i~~~~~~~gi~~~~~v~vGD~-~~Di~~a 185 (265)
.|-..++++++.+ +..+.|.|||+ ..|.+.-
T Consensus 50 ~K~~~i~~i~~~f--P~~kfiLIGDsgq~DpeiY 81 (100)
T PF09949_consen 50 HKRDNIERILRDF--PERKFILIGDSGQHDPEIY 81 (100)
T ss_pred HHHHHHHHHHHHC--CCCcEEEEeeCCCcCHHHH
Confidence 4889999999886 55689999998 5776443
No 263
>PF14336 DUF4392: Domain of unknown function (DUF4392)
Probab=35.75 E-value=2.8e+02 Score=23.66 Aligned_cols=38 Identities=24% Similarity=0.351 Sum_probs=27.8
Q ss_pred ChhHHHHHHHHHHcCCcEEEEeCCCHH-HHHHHHHhcCc
Q 044617 73 DSHVAAAIKSAHSLGCDLKIVSDANQF-YIETIMEHHGL 110 (265)
Q Consensus 73 ~~g~~e~l~~l~~~g~~~~ivS~~~~~-~i~~~l~~~gl 110 (265)
.+|+..+-+.|+..|.++.|+|..... .+...++..+.
T Consensus 62 P~GA~aLa~aL~~lG~~~~ivtd~~~~~~~~~~~~~~~~ 100 (291)
T PF14336_consen 62 PPGAAALARALQALGKEVVIVTDERCAPVVKAAVRAAGL 100 (291)
T ss_pred hHHHHHHHHHHHHcCCeEEEEECHHHHHHHHHHHHHHhh
Confidence 469999999999999999999986533 34444444443
No 264
>PF08444 Gly_acyl_tr_C: Aralkyl acyl-CoA:amino acid N-acyltransferase, C-terminal region; InterPro: IPR013652 This entry represents mammalian-specific glycine N-acyltransferase (also called aralkyl acyl-CoA:amino acid N-acyltransferase; 2.3.1.13 from EC). Mitochondrial acyltransferases catalyse the transfer of an acyl group from acyl-CoA to the N terminus of glycine to produce N-acylglycine. These enzymes can conjugate a multitude of substrates to form a variety of N-acylglycines. The CoA derivatives of a number of aliphatic and aromatic acids, but not phenylacetyl-CoA or (indol-3-yl)acetyl-CoA, can act as donor [, ].
Probab=35.64 E-value=80 Score=21.70 Aligned_cols=35 Identities=14% Similarity=0.125 Sum_probs=29.4
Q ss_pred HHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCc
Q 044617 76 VAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGL 110 (265)
Q Consensus 76 ~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl 110 (265)
+..+++.|+++|++++.-.......+.+.++.+|+
T Consensus 41 ~~~~~~~L~~~g~P~Y~hv~~~N~~~~r~~~~lg~ 75 (89)
T PF08444_consen 41 MYHLAQYLHKLGFPFYGHVDEDNEASQRLSKSLGF 75 (89)
T ss_pred HHHHHHHHHHCCCCeEeehHhccHHHHHHHHHCCC
Confidence 34577899999999999888888888888888885
No 265
>PLN00135 malate dehydrogenase
Probab=35.47 E-value=1.7e+02 Score=25.19 Aligned_cols=64 Identities=16% Similarity=0.200 Sum_probs=38.1
Q ss_pred CCcEEEEeCCCHHHHHHHHHhcCcccccceEEecCceecCCCceEEeeccccccCCCcccccCCCCchHHHHHHHHHhcC
Q 044617 87 GCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRILPYHDSTLSHHGCNLCPSNLCKGFVLDHVCTSFG 166 (265)
Q Consensus 87 g~~~~ivS~~~~~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp~~~~~~~~~~~K~~~i~~~~~~~g 166 (265)
+..+.++||--.-......+..|+... .+++....+| -...-..+.++++
T Consensus 101 ~aivivvsNPvDv~t~~~~~~sg~~~~--~vig~gt~LD----------------------------saR~r~~la~~l~ 150 (309)
T PLN00135 101 DCKVLVVANPANTNALILKEFAPSIPE--KNITCLTRLD----------------------------HNRALGQISERLG 150 (309)
T ss_pred CeEEEEeCCcHHHHHHHHHHHcCCCCc--cEEEeeehHH----------------------------HHHHHHHHHHHhC
Confidence 346777786555555555566676543 5666433222 3344445667889
Q ss_pred CCCceE---EEEcCCCC
Q 044617 167 CGKQRF---IYLGDGRG 180 (265)
Q Consensus 167 i~~~~~---v~vGD~~~ 180 (265)
++++++ +++|-.-.
T Consensus 151 v~~~~V~~~~VlGeHG~ 167 (309)
T PLN00135 151 VPVSDVKNVIIWGNHSS 167 (309)
T ss_pred cChhhceeeEEEEcCCC
Confidence 998776 67785433
No 266
>TIGR02244 HAD-IG-Ncltidse HAD superfamily (subfamily IG) hydrolase, 5'-nucleotidase. A TIGRFAMs model (TIGR01993) represents a (putative) family of _pyrimidine_ 5'-nucleotidases which are also subfamily I HAD's, which should not be confused with the current model.
Probab=35.13 E-value=33 Score=30.00 Aligned_cols=17 Identities=41% Similarity=0.347 Sum_probs=14.8
Q ss_pred ceEEEEecCCCCCCCCc
Q 044617 3 DVVVVFDFDRTLIDDDS 19 (265)
Q Consensus 3 ~k~iifD~DGTL~ds~~ 19 (265)
+++|-||||.||+.-..
T Consensus 12 i~~~GFDmDyTLa~Y~~ 28 (343)
T TIGR02244 12 IQVFGFDMDYTLAQYKS 28 (343)
T ss_pred CCEEEECccccccccCh
Confidence 68899999999998754
No 267
>cd02071 MM_CoA_mut_B12_BD methylmalonyl CoA mutase B12 binding domain. This domain binds to B12 (adenosylcobamide), which initiates the conversion of succinyl CoA and methylmalonyl CoA by forming an adenosyl radical, which then undergoes a rearrangement exchanging a hydrogen atom with a group attached to a neighboring carbon atom. This family is present in both mammals and bacteria. Bacterial members are heterodimers and involved in the fermentation of pyruvate to propionate. Mammalian members are homodimers and responsible for the conversion of odd-chain fatty acids and branched-chain amino acids via propionyl CoA to succinyl CoA for further degradation.
Probab=35.09 E-value=1.1e+02 Score=22.08 Aligned_cols=41 Identities=12% Similarity=0.094 Sum_probs=23.9
Q ss_pred ChhHHHHHHHHHHcCC-cE-EEEeCCCHHHHHHHHHhcCcccc
Q 044617 73 DSHVAAAIKSAHSLGC-DL-KIVSDANQFYIETIMEHHGLLGC 113 (265)
Q Consensus 73 ~~g~~e~l~~l~~~g~-~~-~ivS~~~~~~i~~~l~~~gl~~~ 113 (265)
.+.+.++++.|++.|. .+ +++.+.........+...|++..
T Consensus 64 ~~~~~~~~~~L~~~~~~~i~i~~GG~~~~~~~~~~~~~G~d~~ 106 (122)
T cd02071 64 MTLFPEVIELLRELGAGDILVVGGGIIPPEDYELLKEMGVAEI 106 (122)
T ss_pred HHHHHHHHHHHHhcCCCCCEEEEECCCCHHHHHHHHHCCCCEE
Confidence 4567788888888865 33 33444333333445667885533
No 268
>cd05017 SIS_PGI_PMI_1 The members of this protein family contain the SIS (Sugar ISomerase) domain and have both the phosphoglucose isomerase (PGI) and the phosphomannose isomerase (PMI) functions. These functions catalyze the reversible reactions of glucose 6-phosphate to fructose 6-phosphate, and mannose 6-phosphate to fructose 6-phosphate, respectively at an equal rate. This protein contains two SIS domains. This alignment is based on the first SIS domain.
Probab=34.58 E-value=1.1e+02 Score=21.86 Aligned_cols=36 Identities=14% Similarity=0.334 Sum_probs=26.4
Q ss_pred CChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcC
Q 044617 72 LDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHG 109 (265)
Q Consensus 72 ~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~g 109 (265)
-.+++.+.++.++++|.+++.+|+... +....++.+
T Consensus 55 ~t~e~i~~~~~a~~~g~~iI~IT~~~~--l~~~~~~~~ 90 (119)
T cd05017 55 NTEETLSAVEQAKERGAKIVAITSGGK--LLEMAREHG 90 (119)
T ss_pred CCHHHHHHHHHHHHCCCEEEEEeCCch--HHHHHHHcC
Confidence 356889999999999999999996542 444444444
No 269
>COG4943 Predicted signal transduction protein containing sensor and EAL domains [Signal transduction mechanisms]
Probab=33.77 E-value=1e+02 Score=28.28 Aligned_cols=102 Identities=15% Similarity=0.120 Sum_probs=54.5
Q ss_pred ecCCCCCCCCchHHHHHHhCchHHHHH-----HHccC---------------------ChhHHHHHHHHHHHhCCCCHHH
Q 044617 9 DFDRTLIDDDSDNWVVTQMGLTHLFNQ-----LRSTL---------------------PWNSLMDRMMKELHSQGKTVED 62 (265)
Q Consensus 9 D~DGTL~ds~~~~~~~~~~~~~~~~~~-----~~~~~---------------------~~~~~~~~~~~~~~~~~~~~~~ 62 (265)
+=|||.+.-+....++++.|.-+.+.. .+..+ .-..++..+.+.+...++..++
T Consensus 308 ~~dG~~vsPd~FIplAE~sG~ie~iT~~Vi~~~~~dlG~~L~~~~~l~VsINl~a~Dl~s~rli~~~~~~l~~~~v~pqQ 387 (524)
T COG4943 308 QEDGTVVSPDVFIPLAEESGMIEQITDYVIRNVFRDLGDLLRQHRDLHVSINLSASDLASPRLIDRLNRKLAQYQVRPQQ 387 (524)
T ss_pred ccCCCccChHHhhhHHhhcCchHHHHHHHHHHHHHHhHHHHHhCcceEEEEeeeehhhcCchHHHHHHHHHHhcCcChHH
Confidence 347888877766677777776532211 11111 0123444555555555555555
Q ss_pred HHHHhc--CCCCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCc
Q 044617 63 IANCLR--QCPLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGL 110 (265)
Q Consensus 63 ~~~~~~--~~~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl 110 (265)
+.-.+. ...-.+-+.+.|.++++.|++++|=-=+.-+.--..+..+.+
T Consensus 388 I~lElTER~f~D~~~~~~iI~r~ReaG~~IyIDDFGTGYSnL~YLq~L~V 437 (524)
T COG4943 388 IALELTERTFADPKKMTPIILRLREAGHEIYIDDFGTGYSNLHYLQSLPV 437 (524)
T ss_pred heeehhhhhhcCchhhhHHHHHHHhcCCeEEEccCcCcchhHHHHhhCCc
Confidence 432222 222234577789999999999998632222223333444443
No 270
>TIGR02109 PQQ_syn_pqqE coenzyme PQQ biosynthesis protein E. This model describes coenzyme PQQ biosynthesis protein E, a gene required for the biosynthesis of pyrrolo-quinoline-quinone (coenzyme PQQ). PQQ is required for some glucose dehydrogenases and alcohol dehydrogenases.
Probab=33.01 E-value=85 Score=27.37 Aligned_cols=40 Identities=13% Similarity=0.218 Sum_probs=29.6
Q ss_pred CCCChhHHHHHHHHHHcCCcEEEEeCCCH---HHHHHHHHhcCc
Q 044617 70 CPLDSHVAAAIKSAHSLGCDLKIVSDANQ---FYIETIMEHHGL 110 (265)
Q Consensus 70 ~~~~~g~~e~l~~l~~~g~~~~ivS~~~~---~~i~~~l~~~gl 110 (265)
..++|++.++++.++++|+.+.+.||+.. ..++. +...|+
T Consensus 64 Pll~~~~~~ii~~~~~~g~~~~l~TNG~ll~~e~~~~-L~~~g~ 106 (358)
T TIGR02109 64 PLARPDLVELVAHARRLGLYTNLITSGVGLTEARLDA-LADAGL 106 (358)
T ss_pred ccccccHHHHHHHHHHcCCeEEEEeCCccCCHHHHHH-HHhCCC
Confidence 44578999999999999999999999853 33433 334454
No 271
>PRK05301 pyrroloquinoline quinone biosynthesis protein PqqE; Provisional
Probab=32.42 E-value=90 Score=27.50 Aligned_cols=41 Identities=15% Similarity=0.256 Sum_probs=29.9
Q ss_pred CCCCChhHHHHHHHHHHcCCcEEEEeCCCH---HHHHHHHHhcCc
Q 044617 69 QCPLDSHVAAAIKSAHSLGCDLKIVSDANQ---FYIETIMEHHGL 110 (265)
Q Consensus 69 ~~~~~~g~~e~l~~l~~~g~~~~ivS~~~~---~~i~~~l~~~gl 110 (265)
...+++++.++++.++++|+.+.+.||+.. ..++. +...|+
T Consensus 72 EPll~~~~~~il~~~~~~g~~~~i~TNG~ll~~~~~~~-L~~~g~ 115 (378)
T PRK05301 72 EPLLRKDLEELVAHARELGLYTNLITSGVGLTEARLAA-LKDAGL 115 (378)
T ss_pred ccCCchhHHHHHHHHHHcCCcEEEECCCccCCHHHHHH-HHHcCC
Confidence 345578999999999999999999999853 33333 444554
No 272
>PF01380 SIS: SIS domain SIS domain web page.; InterPro: IPR001347 The SIS (Sugar ISomerase) domain is a phosphosugar-binding domain [] found in many phosphosugar isomerases and phosphosugar binding proteins. SIS domains are also found in proteins that regulate the expression of genes involved in synthesis of phosphosugars possibly by binding to the end-product of the pathway.; GO: 0005529 sugar binding, 0005975 carbohydrate metabolic process; PDB: 3TBF_C 2V4M_A 2ZJ4_A 2ZJ3_A 3FKJ_A 3ODP_A 3EUA_H 1VIV_A 1M3S_B 1TZB_A ....
Probab=32.26 E-value=81 Score=22.48 Aligned_cols=32 Identities=6% Similarity=0.147 Sum_probs=25.7
Q ss_pred CChhHHHHHHHHHHcCCcEEEEeCCCHHHHHH
Q 044617 72 LDSHVAAAIKSAHSLGCDLKIVSDANQFYIET 103 (265)
Q Consensus 72 ~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~ 103 (265)
-..+..+.++.++++|.+++.+|+.....+..
T Consensus 65 ~~~~~~~~~~~ak~~g~~vi~iT~~~~~~l~~ 96 (131)
T PF01380_consen 65 ETRELIELLRFAKERGAPVILITSNSESPLAR 96 (131)
T ss_dssp TTHHHHHHHHHHHHTTSEEEEEESSTTSHHHH
T ss_pred cchhhhhhhHHHHhcCCeEEEEeCCCCCchhh
Confidence 35688899999999999999999876655544
No 273
>cd01766 Ufm1 Urm1-like ubiquitin domain. Ufm1 (ubiquitin-fold modifier 1) is a post-translational UBL (ubiquitin-like) modifier with a tertiary structure similar to that of ubiquitin. Ufm1 is initially expressed as a precursor which undergoes C-terminal cleavage to expose a conserved glycine residue that is required for the conjugation reactions involving Ufm1.
Probab=31.92 E-value=1.5e+02 Score=19.48 Aligned_cols=47 Identities=11% Similarity=0.020 Sum_probs=33.9
Q ss_pred CchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccCCCCCCeeeecCCCc
Q 044617 152 LCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRDCDFVMPRKNYP 201 (265)
Q Consensus 152 ~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~~~~~~~~~~~~ 201 (265)
..-..+++.+++++++++..+..|-+.-..+..++ .++-+|..+|..
T Consensus 26 aPftAvlkfaAEeFkv~~~TsAiiTndGvGINP~q---tAGnvflkhgse 72 (82)
T cd01766 26 TPFTAVLKFAAEEFKVPAATSAIITNDGIGINPAQ---TAGNVFLKHGSE 72 (82)
T ss_pred CchHHHHHHHHHhcCCCccceeEEecCccccChhh---cccceeeecCCE
Confidence 33567899999999999988887776666676663 345577776543
No 274
>cd05710 SIS_1 A subgroup of the SIS domain. SIS (Sugar ISomerase) domains are found in many phosphosugar isomerases and phosphosugar binding proteins. SIS domains are also found in proteins that regulate the expression of genes involved in synthesis of phosphosugars.
Probab=31.66 E-value=74 Score=22.79 Aligned_cols=31 Identities=19% Similarity=0.129 Sum_probs=24.8
Q ss_pred CChhHHHHHHHHHHcCCcEEEEeCCCHHHHH
Q 044617 72 LDSHVAAAIKSAHSLGCDLKIVSDANQFYIE 102 (265)
Q Consensus 72 ~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~ 102 (265)
-.+++.+.++.++++|.+++.+|+.....+.
T Consensus 59 ~t~~~~~~~~~a~~~g~~vi~iT~~~~s~la 89 (120)
T cd05710 59 NTKETVAAAKFAKEKGATVIGLTDDEDSPLA 89 (120)
T ss_pred CChHHHHHHHHHHHcCCeEEEEECCCCCcHH
Confidence 3578889999999999999999987654433
No 275
>TIGR03470 HpnH hopanoid biosynthesis associated radical SAM protein HpnH. The sequences represented by this model are members of the radical SAM superfamily of enzymes (pfam04055). These enzymes utilize an iron-sulfur redox cluster and S-adenosylmethionine to carry out diverse radical mediated reactions. The members of this clade are frequently found in the same locus as squalene-hopene cyclase (SHC, TIGR01507) and other genes associated with the biosynthesis of hopanoid natural products. The linkage between SHC and this radical SAM enzyme is strong; one is nearly always observed in the same genome where the other is found. A hopanoid biosynthesis locus was described in Zymomonas mobilis consisting of the genes HpnA-E and SHC (HpnF). Continuing past SHC are found a phosphorylase enzyme (ZMO0873, i.e. HpnG, TIGR03468) and this radical SAM enzyme (ZMO0874) which we name here HpnH. Granted, in Z. mobilis, HpnH is in a convergent orientation with respect to HpnA-G, but one gene beyond HpnH
Probab=31.56 E-value=48 Score=28.60 Aligned_cols=29 Identities=7% Similarity=-0.006 Sum_probs=25.5
Q ss_pred CCCChhHHHHHHHHHHcCCcEEEEeCCCH
Q 044617 70 CPLDSHVAAAIKSAHSLGCDLKIVSDANQ 98 (265)
Q Consensus 70 ~~~~~g~~e~l~~l~~~g~~~~ivS~~~~ 98 (265)
..++|++.++++.++++|..+.++||+..
T Consensus 83 PLL~pdl~eiv~~~~~~g~~v~l~TNG~l 111 (318)
T TIGR03470 83 PLLHPEIDEIVRGLVARKKFVYLCTNALL 111 (318)
T ss_pred ccccccHHHHHHHHHHcCCeEEEecCcee
Confidence 45678999999999999999999999964
No 276
>TIGR02493 PFLA pyruvate formate-lyase 1-activating enzyme. An iron-sulfur protein with a radical-SAM domain (pfam04055). A single glycine residue in EC 2.3.1.54, formate C-acetyltransferase (formate-pyruvate lyase), is oxidized to the corresponding radical by transfer of H from its CH2 to AdoMet with concomitant cleavage of the latter. The reaction requires Fe2+. The first stage is reduction of the AdoMet to give methionine and the 5'-deoxyadenosin-5-yl radical, which then abstracts a hydrogen radical from the glycine residue.
Probab=29.82 E-value=1.3e+02 Score=24.22 Aligned_cols=38 Identities=13% Similarity=0.131 Sum_probs=27.5
Q ss_pred CCCChhH-HHHHHHHHHcCCcEEEEeCCC----HHHHHHHHHh
Q 044617 70 CPLDSHV-AAAIKSAHSLGCDLKIVSDAN----QFYIETIMEH 107 (265)
Q Consensus 70 ~~~~~g~-~e~l~~l~~~g~~~~ivS~~~----~~~i~~~l~~ 107 (265)
..+.++. .++++.+++.|+++.+.||+. ...+...++.
T Consensus 76 Pll~~~~~~~li~~~~~~g~~~~i~TNG~~~~~~~~~~~ll~~ 118 (235)
T TIGR02493 76 PLLQPEFLSELFKACKELGIHTCLDTSGFLGGCTEAADELLEY 118 (235)
T ss_pred cccCHHHHHHHHHHHHHCCCCEEEEcCCCCCccHHHHHHHHHh
Confidence 3456774 589999999999999999994 3344444443
No 277
>TIGR02494 PFLE_PFLC glycyl-radical enzyme activating protein family. This subset of the radical-SAM family (pfam04055) includes a number of probable activating proteins acting on different enzymes all requiring an amino-acid-centered radical. The closest relatives to this family are the pyruvate-formate lyase activating enzyme (PflA, 1.97.1.4, TIGR02493) and the anaerobic ribonucleotide reductase activating enzyme (TIGR02491). Included within this subfamily are activators of hydroxyphenyl acetate decarboxylase (HdpA, ), benzylsuccinate synthase (BssD, ), gycerol dehydratase (DhaB2, ) as well as enzymes annotated in E. coli as activators of different isozymes of pyruvate-formate lyase (PFLC and PFLE) however, these appear to lack characterization and may activate enzymes with distinctive functions. Most of the sequence-level variability between these forms is concentrated within an N-terminal domain which follows a conserved group of three cysteines and contains a variable pattern of 0
Probab=29.38 E-value=1.1e+02 Score=25.77 Aligned_cols=28 Identities=14% Similarity=0.219 Sum_probs=23.6
Q ss_pred CCChhH-HHHHHHHHHcCCcEEEEeCCCH
Q 044617 71 PLDSHV-AAAIKSAHSLGCDLKIVSDANQ 98 (265)
Q Consensus 71 ~~~~g~-~e~l~~l~~~g~~~~ivS~~~~ 98 (265)
.+.++. .++++.++++|+.+.+.||+..
T Consensus 137 ll~~~~l~~l~~~~k~~g~~~~i~TnG~~ 165 (295)
T TIGR02494 137 LLQPEFALALLQACHERGIHTAVETSGFT 165 (295)
T ss_pred hchHHHHHHHHHHHHHcCCcEeeeCCCCC
Confidence 456775 6899999999999999999964
No 278
>TIGR02765 crypto_DASH cryptochrome, DASH family. Photolyases and cryptochromes are related flavoproteins. Photolyases harness the energy of blue light to repair DNA damage by removing pyrimidine dimers. Cryptochromes do not repair DNA and are presumed to act instead in some other (possibly unknown) process such as entraining circadian rhythms. This model describes the cryptochrome DASH subfamily, one of at least five major subfamilies, which is found in plants, animals, marine bacteria, etc. Members of this family bind both folate and FAD. They may show weak photolyase activity in vitro but have not been shown to affect DNA repair in vivo. Rather, DASH family cryptochromes have been shown to bind RNA (Vibrio cholerae VC1814), or DNA, and seem likely to act in light-responsive regulatory processes.
Probab=29.11 E-value=1.1e+02 Score=27.42 Aligned_cols=39 Identities=18% Similarity=0.209 Sum_probs=28.9
Q ss_pred ChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCcc
Q 044617 73 DSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLL 111 (265)
Q Consensus 73 ~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~ 111 (265)
.++..++=+.|++.|+++.+..+.....+..+++.+++.
T Consensus 60 ~esL~~L~~~L~~~g~~L~v~~G~~~~vl~~L~~~~~~~ 98 (429)
T TIGR02765 60 LESLKDLRTSLRKLGSDLLVRSGKPEDVLPELIKELGVR 98 (429)
T ss_pred HHHHHHHHHHHHHcCCCeEEEeCCHHHHHHHHHHHhCCC
Confidence 455666667778888888888887777777777777754
No 279
>TIGR03595 Obg_CgtA_exten Obg family GTPase CgtA, C-terminal extension. CgtA (see model TIGR02729) is a broadly conserved member of the obg family of GTPases associated with ribosome maturation. This model represents a unique C-terminal domain found in some but not all sequences of CgtA. This region is preceded, and may be followed, by a region of low-complexity sequence.
Probab=29.07 E-value=56 Score=21.15 Aligned_cols=26 Identities=15% Similarity=0.201 Sum_probs=21.7
Q ss_pred hHHHHHHHHHhcCCCCceEEEEcCCC
Q 044617 154 KGFVLDHVCTSFGCGKQRFIYLGDGR 179 (265)
Q Consensus 154 K~~~i~~~~~~~gi~~~~~v~vGD~~ 179 (265)
+...+..++++.|+.+-++|.|||-.
T Consensus 41 ~~~Gv~~~L~~~G~~~GD~V~Ig~~e 66 (69)
T TIGR03595 41 KKLGVEDALRKAGAKDGDTVRIGDFE 66 (69)
T ss_pred HHCCHHHHHHHcCCCCCCEEEEccEE
Confidence 56678888999999999999999843
No 280
>PRK11867 2-oxoglutarate ferredoxin oxidoreductase subunit beta; Reviewed
Probab=29.06 E-value=74 Score=27.07 Aligned_cols=24 Identities=8% Similarity=0.090 Sum_probs=18.3
Q ss_pred HHHHHHHHhcCCCCceEEEEcCCC
Q 044617 156 FVLDHVCTSFGCGKQRFIYLGDGR 179 (265)
Q Consensus 156 ~~i~~~~~~~gi~~~~~v~vGD~~ 179 (265)
..+.+++.+++++++++++|+|.-
T Consensus 30 ~~l~~al~~l~~~p~d~vvvsdiG 53 (286)
T PRK11867 30 AALQRALAELGLDPENVAVVSGIG 53 (286)
T ss_pred HHHHHHHHHhCCCCCcEEEEeCCc
Confidence 556666777789999988888763
No 281
>PF00578 AhpC-TSA: AhpC/TSA family; InterPro: IPR000866 Peroxiredoxins (Prxs) are a ubiquitous family of antioxidant enzymes that also control cytokine-induced peroxide levels which mediate signal transduction in mammalian cells. Prxs can be regulated by changes to phosphorylation, redox and possibly oligomerisation states. Prxs are divided into three classes: typical 2-Cys Prxs; atypical 2-Cys Prxs; and 1-Cys Prxs. All Prxs share the same basic catalytic mechanism, in which an active-site cysteine (the peroxidatic cysteine) is oxidised to a sulphenic acid by the peroxide substrate. The recycling of the sulphenic acid back to a thiol is what distinguishes the three enzyme classes. Using crystal structures, a detailed catalytic cycle has been derived for typical 2-Cys Prxs, including a model for the redox-regulated oligomeric state proposed to control enzyme activity []. Alkyl hydroperoxide reductase (AhpC) is responsible for directly reducing organic hyperoxides in its reduced dithiol form. Thiol specific antioxidant (TSA) is a physiologically important antioxidant which constitutes an enzymatic defence against sulphur-containing radicals. This family contains AhpC and TSA, as well as related proteins.; GO: 0016209 antioxidant activity, 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1QMV_A 1PRX_B 3HJP_C 3HA9_A 2V41_G 2V32_C 2V2G_C 3LWA_A 3IA1_B 1ZYE_G ....
Probab=29.02 E-value=1.2e+02 Score=21.20 Aligned_cols=37 Identities=19% Similarity=0.227 Sum_probs=30.0
Q ss_pred hhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCc
Q 044617 74 SHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGL 110 (265)
Q Consensus 74 ~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl 110 (265)
+...++...+++.|+.++.+|......+....+..++
T Consensus 46 ~~l~~~~~~~~~~~~~vi~is~d~~~~~~~~~~~~~~ 82 (124)
T PF00578_consen 46 PELNELYKKYKDKGVQVIGISTDDPEEIKQFLEEYGL 82 (124)
T ss_dssp HHHHHHHHHHHTTTEEEEEEESSSHHHHHHHHHHHTC
T ss_pred hHHHHHhhhhccceEEeeecccccccchhhhhhhhcc
Confidence 4556677777888999999999888888888888774
No 282
>PRK11866 2-oxoacid ferredoxin oxidoreductase subunit beta; Provisional
Probab=28.31 E-value=85 Score=26.60 Aligned_cols=28 Identities=7% Similarity=0.012 Sum_probs=21.9
Q ss_pred CCchH---HHHHHHHHhcCCCCceEEEEcCC
Q 044617 151 NLCKG---FVLDHVCTSFGCGKQRFIYLGDG 178 (265)
Q Consensus 151 ~~~K~---~~i~~~~~~~gi~~~~~v~vGD~ 178 (265)
|++.. ..++.++..++++++++++++|-
T Consensus 12 GCg~~~il~al~~al~~l~~~~~~~ivvsdi 42 (279)
T PRK11866 12 GCGNYGILEALRKALAELGIPPENVVVVSGI 42 (279)
T ss_pred CCCChHHHHHHHHHHHHhcCCCCCEEEEECC
Confidence 44566 67778888889999999988874
No 283
>TIGR03127 RuMP_HxlB 6-phospho 3-hexuloisomerase. Members of this protein family are 6-phospho 3-hexuloisomerase (PHI), or the PHI domain of a fusion protein. This enzyme is part of the ribulose monophosphate (RuMP) pathway, which in one direction removes the toxic metabolite formaldehyde by assimilation into fructose-6-phosphate. In the other direction, in species lacking a complete pentose phosphate pathway, the RuMP pathway yields ribulose-5-phosphate, necessary for nucleotide biosynthesis, at the cost of also yielding formaldehyde. These latter species tend usually have a formaldehyde-activating enzyme to attach formaldehyde to the C1 carrier tetrahydromethanopterin.
Probab=28.28 E-value=85 Score=24.21 Aligned_cols=32 Identities=9% Similarity=0.195 Sum_probs=25.7
Q ss_pred CChhHHHHHHHHHHcCCcEEEEeCCCHHHHHH
Q 044617 72 LDSHVAAAIKSAHSLGCDLKIVSDANQFYIET 103 (265)
Q Consensus 72 ~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~ 103 (265)
-.+.+.+.++.++++|.+++.+|+.....+..
T Consensus 84 ~t~~~i~~~~~ak~~g~~ii~IT~~~~s~la~ 115 (179)
T TIGR03127 84 ETESLVTVAKKAKEIGATVAAITTNPESTLGK 115 (179)
T ss_pred CcHHHHHHHHHHHHCCCeEEEEECCCCCchHH
Confidence 35678889999999999999999876655544
No 284
>cd04728 ThiG Thiazole synthase (ThiG) is the tetrameric enzyme that is involved in the formation of the thiazole moiety of thiamin pyrophosphate, an essential ubiquitous cofactor that plays an important role in carbohydrate and amino acid metabolism. ThiG catalyzes the formation of thiazole from 1-deoxy-D-xylulose 5-phosphate (DXP) and dehydroglycine, with the help of the sulfur carrier protein ThiS that carries the sulfur needed for thiazole assembly on its carboxy terminus (ThiS-COSH).
Probab=27.97 E-value=2.7e+02 Score=23.17 Aligned_cols=119 Identities=13% Similarity=0.135 Sum_probs=69.5
Q ss_pred CCCCChhHHHHHHHHHHc---CCcEEEEeCCCHHHHHHHHHhcCcccccceEEecCceecCCCceEEeeccccccCCCcc
Q 044617 69 QCPLDSHVAAAIKSAHSL---GCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRILPYHDSTLSHHGC 145 (265)
Q Consensus 69 ~~~~~~g~~e~l~~l~~~---g~~~~ivS~~~~~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp~~~ 145 (265)
...+.|+..+.++..+.. |+.+.-+++.+....+.+ ..+|..-. ...+. |-+.
T Consensus 102 ~~~Llpd~~~tv~aa~~L~~~Gf~vlpyc~dd~~~ar~l-~~~G~~~v--mPlg~---------------------pIGs 157 (248)
T cd04728 102 DKTLLPDPIETLKAAEILVKEGFTVLPYCTDDPVLAKRL-EDAGCAAV--MPLGS---------------------PIGS 157 (248)
T ss_pred ccccccCHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHH-HHcCCCEe--CCCCc---------------------CCCC
Confidence 457789999999888888 998885555556666664 45565321 11110 1110
Q ss_pred cccCCCCchHHHHHHHHHhcCCCCceEEEEcC---CCCCcccccCCCCCCeeeecCCCchhhhhhcCCCeeeEEEEeCCC
Q 044617 146 NLCPSNLCKGFVLDHVCTSFGCGKQRFIYLGD---GRGDFCPTLKLRDCDFVMPRKNYPLWDRICSNPMLIKAKVHEWSS 222 (265)
Q Consensus 146 ~~~~~~~~K~~~i~~~~~~~gi~~~~~v~vGD---~~~Di~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (265)
..|..+++.++.+.+..++ -++++= +..|+..+..+|..++.++.. +. .- .|
T Consensus 158 ---g~Gi~~~~~I~~I~e~~~v----pVI~egGI~tpeda~~AmelGAdgVlV~SA-------It--------~a---~d 212 (248)
T cd04728 158 ---GQGLLNPYNLRIIIERADV----PVIVDAGIGTPSDAAQAMELGADAVLLNTA-------IA--------KA---KD 212 (248)
T ss_pred ---CCCCCCHHHHHHHHHhCCC----cEEEeCCCCCHHHHHHHHHcCCCEEEEChH-------hc--------CC---CC
Confidence 1245568888888876432 244443 357777776667665555532 10 01 56
Q ss_pred HHHHHHHHHHHHHh
Q 044617 223 AEELKKILLHLIGA 236 (265)
Q Consensus 223 ~~el~~~l~~~~~~ 236 (265)
+..+.+.+...++.
T Consensus 213 P~~ma~af~~Av~a 226 (248)
T cd04728 213 PVAMARAFKLAVEA 226 (248)
T ss_pred HHHHHHHHHHHHHH
Confidence 76777766666654
No 285
>cd05013 SIS_RpiR RpiR-like protein. RpiR contains a SIS (Sugar ISomerase) domain, which is found in many phosphosugar isomerases and phosphosugar binding proteins. In E. coli, rpiR negatively regulates the expression of rpiB gene. Both rpiB and rpiA are ribose phosphate isomerases that catalyze the reversible reactions of ribose 5-phosphate into ribulose 5-phosphate.
Probab=27.92 E-value=89 Score=22.36 Aligned_cols=30 Identities=13% Similarity=0.189 Sum_probs=22.9
Q ss_pred ChhHHHHHHHHHHcCCcEEEEeCCCHHHHH
Q 044617 73 DSHVAAAIKSAHSLGCDLKIVSDANQFYIE 102 (265)
Q Consensus 73 ~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~ 102 (265)
.+.+.++++.++++|.+++++|+.....+.
T Consensus 73 ~~~~~~~~~~a~~~g~~iv~iT~~~~~~l~ 102 (139)
T cd05013 73 TKETVEAAEIAKERGAKVIAITDSANSPLA 102 (139)
T ss_pred CHHHHHHHHHHHHcCCeEEEEcCCCCChhH
Confidence 456788889999999999999887554333
No 286
>PF05673 DUF815: Protein of unknown function (DUF815); InterPro: IPR008533 This domain consists of several bacterial proteins of unknown function.
Probab=27.88 E-value=3.2e+02 Score=22.77 Aligned_cols=51 Identities=12% Similarity=0.014 Sum_probs=33.5
Q ss_pred hHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCcccccceEEecCceec
Q 044617 75 HVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTNPTYVD 125 (265)
Q Consensus 75 g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~~i~~~~~~~d 125 (265)
=++.++......|.+++=++......+..+++.+.-..+-..+++.+..|+
T Consensus 68 lVkall~~y~~~GLRlIev~k~~L~~l~~l~~~l~~~~~kFIlf~DDLsFe 118 (249)
T PF05673_consen 68 LVKALLNEYADQGLRLIEVSKEDLGDLPELLDLLRDRPYKFILFCDDLSFE 118 (249)
T ss_pred HHHHHHHHHhhcCceEEEECHHHhccHHHHHHHHhcCCCCEEEEecCCCCC
Confidence 467788888888999988888777777777776542222224555444443
No 287
>TIGR00640 acid_CoA_mut_C methylmalonyl-CoA mutase C-terminal domain. Methylmalonyl-CoA mutase (EC 5.4.99.2) catalyzes a reversible isomerization between L-methylmalonyl-CoA and succinyl-CoA. The enzyme uses an adenosylcobalamin cofactor. It may be a homodimer, as in mitochondrion, or a heterodimer with partially homologous beta chain that does not bind the adenosylcobalamin cofactor, as in Propionibacterium freudenreichii. The most similar archaeal sequences are separate chains, such as AF2215 and AF2219 of Archaeoglobus fulgidus, that correspond roughly to the first 500 and last 130 residues, respectively of known methylmalonyl-CoA mutases. This model describes the C-terminal domain subfamily. In a neighbor-joining tree (methylaspartate mutase S chain as the outgroup), AF2219 branches with a coenzyme B12-dependent enzyme known not to be 5.4.99.2.
Probab=27.87 E-value=1.6e+02 Score=21.73 Aligned_cols=38 Identities=21% Similarity=0.156 Sum_probs=21.2
Q ss_pred hhHHHHHHHHHHcCC-cE-EEEeCCCHHHHHHHHHhcCcc
Q 044617 74 SHVAAAIKSAHSLGC-DL-KIVSDANQFYIETIMEHHGLL 111 (265)
Q Consensus 74 ~g~~e~l~~l~~~g~-~~-~ivS~~~~~~i~~~l~~~gl~ 111 (265)
+.++++++.|+++|. .+ +++-+.....-...+++.|++
T Consensus 68 ~~~~~~~~~L~~~g~~~i~vivGG~~~~~~~~~l~~~Gvd 107 (132)
T TIGR00640 68 TLVPALRKELDKLGRPDILVVVGGVIPPQDFDELKEMGVA 107 (132)
T ss_pred HHHHHHHHHHHhcCCCCCEEEEeCCCChHhHHHHHHCCCC
Confidence 456777777877764 23 333333333334446777764
No 288
>PRK11145 pflA pyruvate formate lyase-activating enzyme 1; Provisional
Probab=27.38 E-value=86 Score=25.64 Aligned_cols=28 Identities=7% Similarity=0.049 Sum_probs=23.4
Q ss_pred CCChhH-HHHHHHHHHcCCcEEEEeCCCH
Q 044617 71 PLDSHV-AAAIKSAHSLGCDLKIVSDANQ 98 (265)
Q Consensus 71 ~~~~g~-~e~l~~l~~~g~~~~ivS~~~~ 98 (265)
.+.++. .++++.+++.|+++.+.||+..
T Consensus 82 ll~~~~~~~l~~~~k~~g~~i~l~TNG~~ 110 (246)
T PRK11145 82 ILQAEFVRDWFRACKKEGIHTCLDTNGFV 110 (246)
T ss_pred hcCHHHHHHHHHHHHHcCCCEEEECCCCC
Confidence 346674 5899999999999999999974
No 289
>KOG0541 consensus Alkyl hydroperoxide reductase/peroxiredoxin [Posttranslational modification, protein turnover, chaperones]
Probab=26.58 E-value=1.7e+02 Score=22.53 Aligned_cols=41 Identities=20% Similarity=0.132 Sum_probs=32.7
Q ss_pred ChhHHHHHHHHHHcCCcEEE-EeCCCHHHHHHHHHhcCcccc
Q 044617 73 DSHVAAAIKSAHSLGCDLKI-VSDANQFYIETIMEHHGLLGC 113 (265)
Q Consensus 73 ~~g~~e~l~~l~~~g~~~~i-vS~~~~~~i~~~l~~~gl~~~ 113 (265)
.||..+-.+.|+++|+..+| +|-...+.+....+.+|....
T Consensus 64 vPGyi~~a~elksKGVd~iicvSVnDpFv~~aW~k~~g~~~~ 105 (171)
T KOG0541|consen 64 VPGYIEKADELKSKGVDEIICVSVNDPFVMKAWAKSLGANDH 105 (171)
T ss_pred CchHHHHHHHHHhcCCcEEEEEecCcHHHHHHHHhhcCccce
Confidence 58999999999999996555 587888888888888876443
No 290
>smart00497 IENR1 Intron encoded nuclease repeat motif. Repeat of unknown function, but possibly DNA-binding via helix-turn-helix motif (Ponting, unpublished).
Probab=26.40 E-value=73 Score=18.77 Aligned_cols=28 Identities=29% Similarity=0.404 Sum_probs=21.2
Q ss_pred ceEEEEecCCCCC-CCCchHHHHHHhCch
Q 044617 3 DVVVVFDFDRTLI-DDDSDNWVVTQMGLT 30 (265)
Q Consensus 3 ~k~iifD~DGTL~-ds~~~~~~~~~~~~~ 30 (265)
..+..+|.+|+++ ...+..++.+.++..
T Consensus 2 k~V~~~d~~~~~i~~f~S~~eAa~~lg~~ 30 (53)
T smart00497 2 KPVYVYDLDGNLIGEFSSIREAAKYLGIS 30 (53)
T ss_pred ccEEEEeCCCCEEEEecCHHHHHHHhCCC
Confidence 3577899999998 456667777777774
No 291
>PF07453 NUMOD1: NUMOD1 domain; InterPro: IPR010896 This helix-turn-helix-containing DNA-binding domain is found associated in homing nucleases [].
Probab=25.90 E-value=86 Score=17.11 Aligned_cols=29 Identities=28% Similarity=0.438 Sum_probs=20.4
Q ss_pred ceEEEEecCCCCCCC-CchHHHHHHhCchH
Q 044617 3 DVVVVFDFDRTLIDD-DSDNWVVTQMGLTH 31 (265)
Q Consensus 3 ~k~iifD~DGTL~ds-~~~~~~~~~~~~~~ 31 (265)
+++.++|++|..+.. .+..++.+.++...
T Consensus 1 k~V~~yd~~~~~i~~F~Si~eAa~~l~i~~ 30 (37)
T PF07453_consen 1 KPVYVYDLNTNEIKSFDSIREAARYLGISH 30 (37)
T ss_pred CeEEEEECCCCeEEEEcCHHHHHHHhCCCH
Confidence 367889999998654 45566777766653
No 292
>TIGR03278 methan_mark_10 putative methanogenesis marker protein 10. Members of this protein family, to date, are found in a completed prokaryotic genome if and only if the species is one of the archaeal methanogens. The presence of motifs with seven invariant Cys residues in the N-terminal 50 residues, including three instances of CXXC, would be consistent with function as an oxidoreductase with FeS clusters. The exact function is unknown, but likely is linked to methanogenesis. In most genomes, the member of this family is encoded by a gene next to, and divergently transcribed from, the methyl coenzyme M reductase operon.
Probab=25.60 E-value=1.5e+02 Score=26.70 Aligned_cols=28 Identities=11% Similarity=0.171 Sum_probs=24.0
Q ss_pred CCCChhHHHHHHHHHHcCCcEEEE-eCCC
Q 044617 70 CPLDSHVAAAIKSAHSLGCDLKIV-SDAN 97 (265)
Q Consensus 70 ~~~~~g~~e~l~~l~~~g~~~~iv-S~~~ 97 (265)
...+|.+.++++.++++|+++++. ||+.
T Consensus 85 pl~~~~l~eLl~~lk~~gi~taI~~TnG~ 113 (404)
T TIGR03278 85 VSCYPELEELTKGLSDLGLPIHLGYTSGK 113 (404)
T ss_pred cccCHHHHHHHHHHHhCCCCEEEeCCCCc
Confidence 345799999999999999999986 8864
No 293
>PF06901 FrpC: RTX iron-regulated protein FrpC; InterPro: IPR010692 This family consists of several RTX iron-regulated FrpC proteins which appear to be found exclusively in Neisseria meningitidis. FrpC has been shown to be related to the RTX family of bacterial cytotoxins. FrpC is found in the meningococcal outer membrane. The function of this family is unknown although it is thought to be a virulence factor [].
Probab=25.46 E-value=39 Score=26.79 Aligned_cols=15 Identities=33% Similarity=0.421 Sum_probs=12.3
Q ss_pred ceEEEEecCCCCCCC
Q 044617 3 DVVVVFDFDRTLIDD 17 (265)
Q Consensus 3 ~k~iifD~DGTL~ds 17 (265)
.+.|-||+|||++--
T Consensus 58 E~~v~~D~~GT~m~i 72 (271)
T PF06901_consen 58 EHTVTFDFQGTKMVI 72 (271)
T ss_pred eeeEEEeccceEEEe
Confidence 367899999999754
No 294
>TIGR01758 MDH_euk_cyt malate dehydrogenase, NAD-dependent. This model represents the NAD-dependent cytosolic malate dehydrogenase from eukaryotes. The enzyme from pig has been studied by X-ray crystallography
Probab=25.17 E-value=3.6e+02 Score=23.38 Aligned_cols=23 Identities=17% Similarity=0.303 Sum_probs=15.5
Q ss_pred HHHHHHHHHhcCCCCceE--EEE-cC
Q 044617 155 GFVLDHVCTSFGCGKQRF--IYL-GD 177 (265)
Q Consensus 155 ~~~i~~~~~~~gi~~~~~--v~v-GD 177 (265)
...=..+.++++++++++ ++| |-
T Consensus 156 ~R~r~~la~~l~v~~~~V~~~~V~Ge 181 (324)
T TIGR01758 156 NRALAQVAERAGVPVSDVKNVIIWGN 181 (324)
T ss_pred HHHHHHHHHHhCCChhhceEeEEEEC
Confidence 444456778899999877 344 64
No 295
>PF15614 WHIM3: WSTF, HB1, Itc1p, MBD9 motif 3
Probab=25.07 E-value=19 Score=21.32 Aligned_cols=41 Identities=17% Similarity=0.148 Sum_probs=21.9
Q ss_pred CCCHHHHHHHHHHH-HHhhccccccccccccCCCcccccccC
Q 044617 220 WSSAEELKKILLHL-IGAISIKEDVDSTVSSQPNSSECRSQT 260 (265)
Q Consensus 220 ~~~~~el~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (265)
++++.+|.+++..+ .....++..--....++-+...|.|-|
T Consensus 4 ~~~~e~ld~L~~aL~~prG~RE~~L~~~L~~~~k~~~~~s~~ 45 (46)
T PF15614_consen 4 YDDPEELDELLKALENPRGKRESKLKKELDKHRKGPLEISVT 45 (46)
T ss_pred ccCHHHHHHHHHHHcCcccHhHHHHHHHHHHHhcchhhhhcc
Confidence 36777777777666 333333322222333555666666654
No 296
>smart00266 CAD Domains present in proteins implicated in post-mortem DNA fragmentation.
Probab=24.94 E-value=42 Score=22.17 Aligned_cols=16 Identities=38% Similarity=0.704 Sum_probs=12.9
Q ss_pred eEEEEecCCCCCCCCc
Q 044617 4 VVVVFDFDRTLIDDDS 19 (265)
Q Consensus 4 k~iifD~DGTL~ds~~ 19 (265)
-.|+++-|||.++++.
T Consensus 39 ~~l~L~eDGT~VddEe 54 (74)
T smart00266 39 VTLVLEEDGTIVDDEE 54 (74)
T ss_pred cEEEEecCCcEEccHH
Confidence 3578999999998843
No 297
>PF08620 RPAP1_C: RPAP1-like, C-terminal; InterPro: IPR013929 Inhibition of RNA polymerase II-associated protein 1 (RPAP1) synthesis in Saccharomyces cerevisiae (Baker's yeast) results in changes in global gene expression that are similar to those caused by the loss of the RNAPII subunit Rpb11 []. This entry represents the C-terminal region that contains the motif GLHHH. This region is conserved from yeast to humans.
Probab=24.60 E-value=26 Score=23.09 Aligned_cols=9 Identities=56% Similarity=1.025 Sum_probs=8.2
Q ss_pred EEecCCCCC
Q 044617 7 VFDFDRTLI 15 (265)
Q Consensus 7 ifD~DGTL~ 15 (265)
=|||+|.|+
T Consensus 4 RFdf~G~l~ 12 (73)
T PF08620_consen 4 RFDFDGNLL 12 (73)
T ss_pred cccCCCCEe
Confidence 399999999
No 298
>cd04795 SIS SIS domain. SIS (Sugar ISomerase) domains are found in many phosphosugar isomerases and phosphosugar binding proteins. SIS domains are also found in proteins that regulate the expression of genes involved in synthesis of phosphosugars.
Probab=24.58 E-value=1e+02 Score=20.04 Aligned_cols=23 Identities=22% Similarity=0.313 Sum_probs=20.3
Q ss_pred CChhHHHHHHHHHHcCCcEEEEe
Q 044617 72 LDSHVAAAIKSAHSLGCDLKIVS 94 (265)
Q Consensus 72 ~~~g~~e~l~~l~~~g~~~~ivS 94 (265)
-.+.+.++++.++++|.+++.+|
T Consensus 59 ~t~~~~~~~~~a~~~g~~ii~it 81 (87)
T cd04795 59 RTEELLAALEIAKELGIPVIAIT 81 (87)
T ss_pred CCHHHHHHHHHHHHcCCeEEEEe
Confidence 35789999999999999999888
No 299
>cd06537 CIDE_N_B CIDE_N domain of CIDE-B proteins. The CIDE_N (cell death-inducing DFF45-like effector, N-terminal) domain is found at the N-terminus of the CIDE (cell death-inducing DFF45-like effector) proteins. These proteins are associated with the chromatin condensation and DNA fragmentation events of apoptosis; the CIDE_N domain is thought to regulate the activity of the CAD/DFF40, ICAD/DFF45 and CIDE nucleases during apoptosis. The CIDE protein family includes 3 members: CIDE-A, CIDE-B, and FSP27(CIDE-C). Based on sequence similarity with DFF40 and DFF45, CIDE proteins were initially characterized as mitochondrial activators of apoptosis. However, strong metabolic phenotypes of mice lacking CIDE-A and CIDE-B indicated that this family may play critical roles in energy balance.
Probab=24.48 E-value=39 Score=22.71 Aligned_cols=16 Identities=25% Similarity=0.507 Sum_probs=13.1
Q ss_pred eEEEEecCCCCCCCCc
Q 044617 4 VVVVFDFDRTLIDDDS 19 (265)
Q Consensus 4 k~iifD~DGTL~ds~~ 19 (265)
-.|+.+-|||.+|++.
T Consensus 40 ~~lvLeeDGT~Vd~Ee 55 (81)
T cd06537 40 LTLVLEEDGTAVDSED 55 (81)
T ss_pred eEEEEecCCCEEccHH
Confidence 3588999999998843
No 300
>cd06539 CIDE_N_A CIDE_N domain of CIDE-A proteins. The CIDE_N (cell death-inducing DFF45-like effector, N-terminal) domain is found at the N-terminus of the CIDE (cell death-inducing DFF45-like effector) proteins. These proteins are associated with the chromatin condensation and DNA fragmentation events of apoptosis; the CIDE_N domain is thought to regulate the activity of the CAD/DFF40, ICAD/DFF45, and CIDE nucleases during apoptosis. The CIDE protein family includes 3 members: CIDE-A, CIDE-B, and FSP27(CIDE-C). Based on sequence similarity with DFF40 and DFF45, the CIDE proteins were initially characterized as mitochondrial activators of apoptosis. However, strong metabolic phenotypes of mice lacking CIDE-A and CIDE-B indicated that this family may play critical roles in energy balance.
Probab=24.36 E-value=41 Score=22.48 Aligned_cols=16 Identities=31% Similarity=0.586 Sum_probs=12.9
Q ss_pred eEEEEecCCCCCCCCc
Q 044617 4 VVVVFDFDRTLIDDDS 19 (265)
Q Consensus 4 k~iifD~DGTL~ds~~ 19 (265)
-.++.+-|||.+|++.
T Consensus 41 ~~lvL~eDGT~Vd~Ee 56 (78)
T cd06539 41 VTLVLEEDGTVVDTEE 56 (78)
T ss_pred cEEEEeCCCCEEccHH
Confidence 3578899999998843
No 301
>cd05006 SIS_GmhA Phosphoheptose isomerase is a member of the SIS (Sugar ISomerase) superfamily. Phosphoheptose isomerase catalyzes the isomerization of sedoheptulose 7-phosphate into D-glycero-D-mannoheptose 7-phosphate. This is the first step of the biosynthesis of gram-negative bacteria inner core lipopolysaccharide precursor, L-glycero-D-mannoheptose (Gmh).
Probab=23.94 E-value=1e+02 Score=23.78 Aligned_cols=28 Identities=14% Similarity=0.124 Sum_probs=22.2
Q ss_pred CChhHHHHHHHHHHcCCcEEEEeCCCHH
Q 044617 72 LDSHVAAAIKSAHSLGCDLKIVSDANQF 99 (265)
Q Consensus 72 ~~~g~~e~l~~l~~~g~~~~ivS~~~~~ 99 (265)
-.+.+.+.++.++++|.+++.+|+....
T Consensus 113 ~t~~~i~~~~~ak~~Ga~vI~IT~~~~s 140 (177)
T cd05006 113 NSPNVLKALEAAKERGMKTIALTGRDGG 140 (177)
T ss_pred CCHHHHHHHHHHHHCCCEEEEEeCCCCC
Confidence 4578888889999999998888876443
No 302
>PF01976 DUF116: Protein of unknown function DUF116; InterPro: IPR002829 These archaeal and bacterial proteins have no known function. Members of this family contain seven conserved cysteines and may also be an integral membrane protein.
Probab=23.56 E-value=2.4e+02 Score=21.65 Aligned_cols=34 Identities=15% Similarity=0.179 Sum_probs=26.8
Q ss_pred hHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCc
Q 044617 75 HVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGL 110 (265)
Q Consensus 75 g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl 110 (265)
.+.++++..++.|++++|+|+++. +..+++....
T Consensus 74 ~Ig~l~~lae~~g~~v~i~~Ggt~--ar~~ik~~~p 107 (158)
T PF01976_consen 74 DIGDLKKLAEKYGYKVYIATGGTL--ARKIIKEYRP 107 (158)
T ss_pred chhHHHHHHHHcCCEEEEEcChHH--HHHHHHHhCC
Confidence 577888999999999999999844 6666666554
No 303
>KOG2832 consensus TFIIF-interacting CTD phosphatase, including NLI-interacting factor (involved in RNA polymerase II regulation) [Transcription]
Probab=23.45 E-value=1.9e+02 Score=25.53 Aligned_cols=42 Identities=7% Similarity=0.037 Sum_probs=35.0
Q ss_pred CCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCcccc
Q 044617 71 PLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGC 113 (265)
Q Consensus 71 ~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~ 113 (265)
.-.||+.-+|..+.. .+++++.|+...-++..+++.++-..+
T Consensus 214 ~kRPgvD~FL~~~a~-~yEIVi~sse~gmt~~pl~d~lDP~g~ 255 (393)
T KOG2832|consen 214 KKRPGVDYFLGHLAK-YYEIVVYSSEQGMTVFPLLDALDPKGY 255 (393)
T ss_pred ccCchHHHHHHhhcc-cceEEEEecCCccchhhhHhhcCCcce
Confidence 457999999999984 699999999988888888888765444
No 304
>COG1180 PflA Pyruvate-formate lyase-activating enzyme [Posttranslational modification, protein turnover, chaperones]
Probab=23.18 E-value=1e+02 Score=25.80 Aligned_cols=27 Identities=7% Similarity=0.092 Sum_probs=23.6
Q ss_pred ChhHHHHHHHHHHcCCcEEEEeCCCHH
Q 044617 73 DSHVAAAIKSAHSLGCDLKIVSDANQF 99 (265)
Q Consensus 73 ~~g~~e~l~~l~~~g~~~~ivS~~~~~ 99 (265)
.+.+.++++.++++|+.+++.||+...
T Consensus 98 ~e~~~~~~~~ake~Gl~~~l~TnG~~~ 124 (260)
T COG1180 98 AEFALDLLRAAKERGLHVALDTNGFLP 124 (260)
T ss_pred HHHHHHHHHHHHHCCCcEEEEcCCCCC
Confidence 567889999999999999999999543
No 305
>PRK13937 phosphoheptose isomerase; Provisional
Probab=23.05 E-value=1.2e+02 Score=23.77 Aligned_cols=31 Identities=19% Similarity=0.175 Sum_probs=22.4
Q ss_pred CChhHHHHHHHHHHcCCcEEEEeCCCHHHHH
Q 044617 72 LDSHVAAAIKSAHSLGCDLKIVSDANQFYIE 102 (265)
Q Consensus 72 ~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~ 102 (265)
-.+.+.+.++.++++|.+++.+|+.....+.
T Consensus 118 ~t~~~~~~~~~ak~~g~~~I~iT~~~~s~L~ 148 (188)
T PRK13937 118 NSPNVLAALEKARELGMKTIGLTGRDGGKMK 148 (188)
T ss_pred CcHHHHHHHHHHHHCCCeEEEEeCCCCChhH
Confidence 3567888888888888888888876544333
No 306
>PLN00112 malate dehydrogenase (NADP); Provisional
Probab=22.93 E-value=3.2e+02 Score=24.98 Aligned_cols=72 Identities=10% Similarity=0.056 Sum_probs=41.8
Q ss_pred HHHHHHHHH---cCCcEEEEeCCCHHHHHHHHHhcCcccccceEEecCceecCCCceEEeeccccccCCCcccccCCCCc
Q 044617 77 AAAIKSAHS---LGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRILPYHDSTLSHHGCNLCPSNLC 153 (265)
Q Consensus 77 ~e~l~~l~~---~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp~~~~~~~~~~~ 153 (265)
+++...+.+ .+..+.++||--.-......+..|+.. ..+++....+|
T Consensus 206 k~i~~~I~~~a~p~~ivIVVsNPvDv~t~v~~k~sg~~~--~rViGtgT~LD---------------------------- 255 (444)
T PLN00112 206 AEQGKALNEVASRNVKVIVVGNPCNTNALICLKNAPNIP--AKNFHALTRLD---------------------------- 255 (444)
T ss_pred HHHHHHHHHhcCCCeEEEEcCCcHHHHHHHHHHHcCCCC--cceEEeeccHH----------------------------
Confidence 344444444 234666777654444444455566654 26777543333
Q ss_pred hHHHHHHHHHhcCCCCceE---EEEcCC
Q 044617 154 KGFVLDHVCTSFGCGKQRF---IYLGDG 178 (265)
Q Consensus 154 K~~~i~~~~~~~gi~~~~~---v~vGD~ 178 (265)
-...-..+.+++|++++++ +.+|-.
T Consensus 256 saR~r~~LA~~l~V~~~~V~~~~V~GeH 283 (444)
T PLN00112 256 ENRAKCQLALKAGVFYDKVSNVTIWGNH 283 (444)
T ss_pred HHHHHHHHHHHhCcCHHHcccceEEecC
Confidence 3445556778899999876 677854
No 307
>smart00540 LEM in nuclear membrane-associated proteins. LEM, domain in nuclear membrane-associated proteins, including lamino-associated polypeptide 2 and emerin.
Probab=22.61 E-value=98 Score=18.15 Aligned_cols=31 Identities=13% Similarity=0.109 Sum_probs=21.8
Q ss_pred HHHHHHHHHcCCcEEEEeCCCHHHHHHHHHh
Q 044617 77 AAAIKSAHSLGCDLKIVSDANQFYIETIMEH 107 (265)
Q Consensus 77 ~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~ 107 (265)
.++.+.|++.|++.+=+|...+......+..
T Consensus 9 ~eL~~~L~~~G~~~gPIt~sTR~vy~kkL~~ 39 (44)
T smart00540 9 AELRAELKQYGLPPGPITDTTRKLYEKKLRK 39 (44)
T ss_pred HHHHHHHHHcCCCCCCcCcchHHHHHHHHHH
Confidence 3667788888888887777766665555543
No 308
>PF00072 Response_reg: Response regulator receiver domain; InterPro: IPR001789 Two-component signal transduction systems enable bacteria to sense, respond, and adapt to a wide range of environments, stressors, and growth conditions []. Some bacteria can contain up to as many as 200 two-component systems that need tight regulation to prevent unwanted cross-talk []. These pathways have been adapted to response to a wide variety of stimuli, including nutrients, cellular redox state, changes in osmolarity, quorum signals, antibiotics, and more []. Two-component systems are comprised of a sensor histidine kinase (HK) and its cognate response regulator (RR) []. The HK catalyses its own auto-phosphorylation followed by the transfer of the phosphoryl group to the receiver domain on RR; phosphorylation of the RR usually activates an attached output domain, which can then effect changes in cellular physiology, often by regulating gene expression. Some HK are bifunctional, catalysing both the phosphorylation and dephosphorylation of their cognate RR. The input stimuli can regulate either the kinase or phosphatase activity of the bifunctional HK. A variant of the two-component system is the phospho-relay system. Here a hybrid HK auto-phosphorylates and then transfers the phosphoryl group to an internal receiver domain, rather than to a separate RR protein. The phosphoryl group is then shuttled to histidine phosphotransferase (HPT) and subsequently to a terminal RR, which can evoke the desired response [, ]. Bipartite response regulator proteins are involved in a two-component signal transduction system in bacteria, and certain eukaryotes like protozoa, that functions to detect and respond to environmental changes []. These systems have been detected during host invasion, drug resistance, motility, phosphate uptake, osmoregulation, and nitrogen fixation, amongst others []. The two-component system consists of a histidine protein kinase environmental sensor that phosphorylates the receiver domain of a response regulator protein; phosphorylation induces a conformational change in the response regulator, which activates the effector domain, triggering the cellular response []. The domains of the two-component proteins are highly modular, but the core structures and activities are maintained. The response regulators act as phosphorylation-activated switches to affect a cellular response, usually by transcriptional regulation. Most of these proteins consist of two domains, an N-terminal response regulator receiver domain, and a variable C-terminal effector domain with DNA-binding activity. This entry represents the response regulator receiver domain, which belongs to the CheY family, and receives the signal from the sensor partner in the two-component system.; GO: 0000156 two-component response regulator activity, 0000160 two-component signal transduction system (phosphorelay), 0006355 regulation of transcription, DNA-dependent; PDB: 2QR3_A 2QXY_A 1I3C_A 1JLK_A 2PKX_A 2PL1_A 3H1F_A 3H1E_A 3GWG_A 3H1G_A ....
Probab=22.33 E-value=1.7e+02 Score=19.75 Aligned_cols=37 Identities=8% Similarity=0.017 Sum_probs=24.3
Q ss_pred hHHHHHHHHHHcC--CcEEEEeCCCHHHHHHHHHhcCcc
Q 044617 75 HVAAAIKSAHSLG--CDLKIVSDANQFYIETIMEHHGLL 111 (265)
Q Consensus 75 g~~e~l~~l~~~g--~~~~ivS~~~~~~i~~~l~~~gl~ 111 (265)
...++++++++.+ .+++++|+.........+-+.|..
T Consensus 57 ~~~~~~~~i~~~~~~~~ii~~t~~~~~~~~~~~~~~g~~ 95 (112)
T PF00072_consen 57 DGLELLEQIRQINPSIPIIVVTDEDDSDEVQEALRAGAD 95 (112)
T ss_dssp BHHHHHHHHHHHTTTSEEEEEESSTSHHHHHHHHHTTES
T ss_pred cccccccccccccccccEEEecCCCCHHHHHHHHHCCCC
Confidence 4557777777754 788888876654444444477754
No 309
>PRK00208 thiG thiazole synthase; Reviewed
Probab=22.29 E-value=4.5e+02 Score=21.91 Aligned_cols=119 Identities=13% Similarity=0.127 Sum_probs=68.1
Q ss_pred CCCCChhHHHHHHHHHHc---CCcEEEEeCCCHHHHHHHHHhcCcccccceEEecCceecCCCceEEeeccccccCCCcc
Q 044617 69 QCPLDSHVAAAIKSAHSL---GCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRILPYHDSTLSHHGC 145 (265)
Q Consensus 69 ~~~~~~g~~e~l~~l~~~---g~~~~ivS~~~~~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp~~~ 145 (265)
...+.|+..+.++..++. |+.+.-+++.+....+.+ ..+|..-. ...+. |-+.
T Consensus 102 ~~~llpd~~~tv~aa~~L~~~Gf~vlpyc~~d~~~ak~l-~~~G~~~v--mPlg~---------------------pIGs 157 (250)
T PRK00208 102 DKTLLPDPIETLKAAEILVKEGFVVLPYCTDDPVLAKRL-EEAGCAAV--MPLGA---------------------PIGS 157 (250)
T ss_pred CCCCCcCHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHH-HHcCCCEe--CCCCc---------------------CCCC
Confidence 346788999999888887 998884555555555554 45565321 11110 1110
Q ss_pred cccCCCCchHHHHHHHHHhcCCCCceEEEEcCC---CCCcccccCCCCCCeeeecCCCchhhhhhcCCCeeeEEEEeCCC
Q 044617 146 NLCPSNLCKGFVLDHVCTSFGCGKQRFIYLGDG---RGDFCPTLKLRDCDFVMPRKNYPLWDRICSNPMLIKAKVHEWSS 222 (265)
Q Consensus 146 ~~~~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~---~~Di~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (265)
..+..+++.++.+.+..++ -+.++=+ ..|+..+..+|..++.++.. +. .- .|
T Consensus 158 ---g~gi~~~~~i~~i~e~~~v----pVIveaGI~tpeda~~AmelGAdgVlV~SA-------It--------ka---~d 212 (250)
T PRK00208 158 ---GLGLLNPYNLRIIIEQADV----PVIVDAGIGTPSDAAQAMELGADAVLLNTA-------IA--------VA---GD 212 (250)
T ss_pred ---CCCCCCHHHHHHHHHhcCC----eEEEeCCCCCHHHHHHHHHcCCCEEEEChH-------hh--------CC---CC
Confidence 1244468888888876433 2444433 57777776666655555532 11 01 56
Q ss_pred HHHHHHHHHHHHHh
Q 044617 223 AEELKKILLHLIGA 236 (265)
Q Consensus 223 ~~el~~~l~~~~~~ 236 (265)
+..+.+.+...++.
T Consensus 213 P~~ma~af~~Av~a 226 (250)
T PRK00208 213 PVAMARAFKLAVEA 226 (250)
T ss_pred HHHHHHHHHHHHHH
Confidence 77777766666644
No 310
>PF02142 MGS: MGS-like domain This is a subfamily of this family; InterPro: IPR011607 This domain composes the whole protein of methylglyoxal synthetase and the domain is also found in carbamoyl phosphate synthetase (CPS) where it forms a regulatory domain that binds to the allosteric effector ornithine. The known structures in this domain show a common phosphate binding site []. ; PDB: 4A1O_A 3ZZM_A 1ZCZ_A 1M6V_C 1CS0_C 1C30_E 1C3O_G 1BXR_A 1T36_E 1A9X_A ....
Probab=21.60 E-value=85 Score=21.45 Aligned_cols=21 Identities=14% Similarity=0.336 Sum_probs=12.6
Q ss_pred hHHHHHHHHHHcCCcEEEEeCC
Q 044617 75 HVAAAIKSAHSLGCDLKIVSDA 96 (265)
Q Consensus 75 g~~e~l~~l~~~g~~~~ivS~~ 96 (265)
|+.++.+.|.+.|++++ +|.+
T Consensus 1 e~~~~a~~l~~lG~~i~-AT~g 21 (95)
T PF02142_consen 1 EIVPLAKRLAELGFEIY-ATEG 21 (95)
T ss_dssp THHHHHHHHHHTTSEEE-EEHH
T ss_pred CHHHHHHHHHHCCCEEE-EChH
Confidence 34566677777776555 4544
No 311
>PF08328 ASL_C: Adenylosuccinate lyase C-terminal; InterPro: IPR013539 This domain is found at the C terminus of adenylosuccinate lyase(ASL; PurB in Escherichia coli). It has been identified in bacteria, eukaryotes and archaea and is found together with the lyase domain IPR000362 from INTERPRO. ASL catalyses the cleavage of succinylaminoimidazole carboxamide ribotide to aminoimidazole carboxamide ribotide and fumarate and the cleavage of adenylosuccinate to adenylate and fumarate []. ; GO: 0004018 N6-(1,2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity, 0006188 IMP biosynthetic process; PDB: 2HVG_A 2QGA_C 2PTS_A 2PTR_A 2PTQ_B 3BHG_A 3GZH_A.
Probab=21.59 E-value=2.7e+02 Score=20.18 Aligned_cols=31 Identities=13% Similarity=0.159 Sum_probs=18.4
Q ss_pred CCCCHHHHHHHhcCCCCChhHHHHHHHHHHc
Q 044617 56 QGKTVEDIANCLRQCPLDSHVAAAIKSAHSL 86 (265)
Q Consensus 56 ~~~~~~~~~~~~~~~~~~~g~~e~l~~l~~~ 86 (265)
..++.+.+..++....+.+++++-|..|.-.
T Consensus 82 ~~it~~~l~~fI~~L~ip~~~k~~L~~ltP~ 112 (115)
T PF08328_consen 82 KKITKEDLREFIESLDIPEEAKARLLALTPA 112 (115)
T ss_dssp S---HHHHHHHHHTSSS-HHHHHHHHH--CC
T ss_pred CCCCHHHHHHHHHhCCCCHHHHHHHHhcCcc
Confidence 3456677777888888888888877766543
No 312
>TIGR00441 gmhA phosphoheptose isomerase. Involved in lipopolysaccharide biosynthesis it may have a role in virulence in Haemophilus ducreyi.
Probab=21.37 E-value=1.3e+02 Score=22.70 Aligned_cols=29 Identities=17% Similarity=0.110 Sum_probs=23.1
Q ss_pred CChhHHHHHHHHHHcCCcEEEEeCCCHHH
Q 044617 72 LDSHVAAAIKSAHSLGCDLKIVSDANQFY 100 (265)
Q Consensus 72 ~~~g~~e~l~~l~~~g~~~~ivS~~~~~~ 100 (265)
-.+.+.+.++.++++|.+++.+|+.....
T Consensus 91 ~t~~~~~~~~~a~~~g~~ii~iT~~~~s~ 119 (154)
T TIGR00441 91 NSKNVLKAIEAAKDKGMKTITLAGKDGGK 119 (154)
T ss_pred CCHHHHHHHHHHHHCCCEEEEEeCCCCCc
Confidence 45788889999999999999998865443
No 313
>COG0602 NrdG Organic radical activating enzymes [Posttranslational modification, protein turnover, chaperones]
Probab=21.34 E-value=1e+02 Score=24.92 Aligned_cols=27 Identities=7% Similarity=0.185 Sum_probs=23.3
Q ss_pred ChhHHHHHHHHHHcCCcEEEEeCCCHH
Q 044617 73 DSHVAAAIKSAHSLGCDLKIVSDANQF 99 (265)
Q Consensus 73 ~~g~~e~l~~l~~~g~~~~ivS~~~~~ 99 (265)
.++..++++.++++|+++.+=||+...
T Consensus 85 ~~~l~~Ll~~l~~~g~~~~lETngti~ 111 (212)
T COG0602 85 QPNLLELLELLKRLGFRIALETNGTIP 111 (212)
T ss_pred cccHHHHHHHHHhCCceEEecCCCCcc
Confidence 458999999999999999999988543
No 314
>cd05005 SIS_PHI Hexulose-6-phosphate isomerase (PHI). PHI is a member of the SIS (Sugar ISomerase domain) superfamily. In the ribulose monophosphate pathway of formaldehyde fixation, hexulose-6-phosphate synthase catalyzes the condensation of ribulose-5-phosphate with formadelhyde to become hexulose-6-phosphate, which is then isomerized to fructose-6-phosphate by PHI.
Probab=21.28 E-value=1.3e+02 Score=23.13 Aligned_cols=32 Identities=16% Similarity=0.205 Sum_probs=25.1
Q ss_pred CChhHHHHHHHHHHcCCcEEEEeCCCHHHHHH
Q 044617 72 LDSHVAAAIKSAHSLGCDLKIVSDANQFYIET 103 (265)
Q Consensus 72 ~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~ 103 (265)
-.+.+.++++.++++|.+++.+|+.....+..
T Consensus 87 ~t~~~i~~~~~ak~~g~~iI~IT~~~~s~la~ 118 (179)
T cd05005 87 ETSSVVNAAEKAKKAGAKVVLITSNPDSPLAK 118 (179)
T ss_pred CcHHHHHHHHHHHHCCCeEEEEECCCCCchHH
Confidence 35678889999999999999999876554443
No 315
>PRK01018 50S ribosomal protein L30e; Reviewed
Probab=21.27 E-value=2.9e+02 Score=19.15 Aligned_cols=38 Identities=16% Similarity=-0.011 Sum_probs=27.1
Q ss_pred cCCCCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHH
Q 044617 68 RQCPLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIM 105 (265)
Q Consensus 68 ~~~~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l 105 (265)
....+.-|..+.++.+++...+++|+++.....+...+
T Consensus 13 ragkl~~G~~~v~kai~~gkaklViiA~D~~~~~~~~i 50 (99)
T PRK01018 13 DTGKVILGSKRTIKAIKLGKAKLVIVASNCPKDIKEDI 50 (99)
T ss_pred HcCCEEEcHHHHHHHHHcCCceEEEEeCCCCHHHHHHH
Confidence 45678899999999999877888777655444433333
No 316
>PTZ00325 malate dehydrogenase; Provisional
Probab=21.27 E-value=4.9e+02 Score=22.51 Aligned_cols=74 Identities=11% Similarity=-0.005 Sum_probs=43.2
Q ss_pred hHHHHHHHHHHcCC-cEEEEeCCCHHHHHHHH-----HhcCcccccceEEecCceecCCCceEEeeccccccCCCccccc
Q 044617 75 HVAAAIKSAHSLGC-DLKIVSDANQFYIETIM-----EHHGLLGCFSEIYTNPTYVDEQGRLRILPYHDSTLSHHGCNLC 148 (265)
Q Consensus 75 g~~e~l~~l~~~g~-~~~ivS~~~~~~i~~~l-----~~~gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp~~~~~~ 148 (265)
.+++++..+++.|. .++++++.+...+-.+. +..++..- .+++... +|
T Consensus 104 i~~~i~~~i~~~~~~~iviv~SNPvdv~~~~~~~~~~~~sg~p~~--~viG~g~-LD----------------------- 157 (321)
T PTZ00325 104 IVRDLVAAVASSAPKAIVGIVSNPVNSTVPIAAETLKKAGVYDPR--KLFGVTT-LD----------------------- 157 (321)
T ss_pred HHHHHHHHHHHHCCCeEEEEecCcHHHHHHHHHhhhhhccCCChh--heeechh-HH-----------------------
Confidence 57778888888885 45555655555555544 33444422 4666421 21
Q ss_pred CCCCchHHHHHHHHHhcCCCCce--EEEEcCCC
Q 044617 149 PSNLCKGFVLDHVCTSFGCGKQR--FIYLGDGR 179 (265)
Q Consensus 149 ~~~~~K~~~i~~~~~~~gi~~~~--~v~vGD~~ 179 (265)
-...-..+.+++++++++ ++++|-.-
T Consensus 158 -----s~R~r~~la~~l~v~~~~V~~~VlGeHG 185 (321)
T PTZ00325 158 -----VVRARKFVAEALGMNPYDVNVPVVGGHS 185 (321)
T ss_pred -----HHHHHHHHHHHhCcChhheEEEEEeecC
Confidence 344445667778888754 56788443
No 317
>cd03018 PRX_AhpE_like Peroxiredoxin (PRX) family, AhpE-like subfamily; composed of proteins similar to Mycobacterium tuberculosis AhpE. AhpE is described as a 1-cys PRX because of the absence of a resolving cysteine. The structure and sequence of AhpE, however, show greater similarity to 2-cys PRXs than 1-cys PRXs. PRXs are thiol-specific antioxidant (TSA) proteins that confer a protective role in cells through their peroxidase activity in which hydrogen peroxide, peroxynitrate, and organic hydroperoxides are reduced and detoxified using reducing equivalents derived from either thioredoxin, glutathione, trypanothione and AhpF. The first step of catalysis is the nucleophilic attack by the peroxidatic cysteine on the peroxide leading to the formation of a cysteine sulfenic acid intermediate. The absence of a resolving cysteine suggests that functional AhpE is regenerated by an external reductant. The solution behavior and crystal structure of AhpE show that it forms dimers and octamers.
Probab=21.23 E-value=2.5e+02 Score=20.41 Aligned_cols=37 Identities=16% Similarity=0.283 Sum_probs=27.3
Q ss_pred hhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCc
Q 044617 74 SHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGL 110 (265)
Q Consensus 74 ~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl 110 (265)
+...++.+.+++.|+.++.+|......++..++..++
T Consensus 49 ~~l~~~~~~~~~~~v~vi~vs~d~~~~~~~~~~~~~~ 85 (149)
T cd03018 49 CALRDSLELFEAAGAEVLGISVDSPFSLRAWAEENGL 85 (149)
T ss_pred HHHHHHHHHHHhCCCEEEEecCCCHHHHHHHHHhcCC
Confidence 4555666777777888888887777777777777765
No 318
>COG0263 ProB Glutamate 5-kinase [Amino acid transport and metabolism]
Probab=20.60 E-value=1.1e+02 Score=26.88 Aligned_cols=23 Identities=17% Similarity=0.388 Sum_probs=19.8
Q ss_pred hhHHHHHHHHHHcCCcEEEEeCC
Q 044617 74 SHVAAAIKSAHSLGCDLKIVSDA 96 (265)
Q Consensus 74 ~g~~e~l~~l~~~g~~~~ivS~~ 96 (265)
....+.+..|++.|++++|||++
T Consensus 31 ~~l~~~ia~L~~~G~eVilVSSG 53 (369)
T COG0263 31 EELVRQVAALHKAGHEVVLVSSG 53 (369)
T ss_pred HHHHHHHHHHHhCCCEEEEEccc
Confidence 45667889999999999999986
No 319
>cd01615 CIDE_N CIDE_N domain, found at the N-terminus of the CIDE (cell death-inducing DFF45-like effector) proteins, as well as CAD nuclease (caspase-activated DNase/DNA fragmentation factor, DFF40) and its inhibitor, ICAD(DFF45). These proteins are associated with the chromatin condensation and DNA fragmentation events of apoptosis; the CIDE_N domain is thought to regulate the activity of ICAD/DFF45, and the CAD/DFF40 and CIDE nucleases during apoptosis. The CIDE-N domain is also found in the FSP27/CIDE-C protein.
Probab=20.53 E-value=58 Score=21.77 Aligned_cols=16 Identities=38% Similarity=0.588 Sum_probs=12.9
Q ss_pred eEEEEecCCCCCCCCc
Q 044617 4 VVVVFDFDRTLIDDDS 19 (265)
Q Consensus 4 k~iifD~DGTL~ds~~ 19 (265)
-.|+++-|||.++++.
T Consensus 41 ~~lvL~eDGTeVddEe 56 (78)
T cd01615 41 VTLVLEEDGTEVDDEE 56 (78)
T ss_pred eEEEEeCCCcEEccHH
Confidence 3588999999998843
No 320
>PF00696 AA_kinase: Amino acid kinase family Match to Glutamate-5-kinases, C-terminal end of the alignment Match to Aspartate kinases; InterPro: IPR001048 This entry contains proteins with various specificities and includes the aspartate, glutamate and uridylate kinase families. In prokaryotes and plants the synthesis of the essential amino acids lysine and threonine is predominantly regulated by feed-back inhibition of aspartate kinase (AK) and dihydrodipicolinate synthase (DHPS). In Escherichia coli, thrA, metLM, and lysC encode aspartokinase isozymes that show feedback inhibition by threonine, methionine, and lysine, respectively []. The lysine-sensitive isoenzyme of aspartate kinase from spinach leaves has a subunit composition of 4 large and 4 small subunits []. In plants although the control of carbon fixation and nitrogen assimilation has been studied in detail, relatively little is known about the regulation of carbon and nitrogen flow into amino acids. The metabolic regulation of expression of an Arabidopsis thaliana aspartate kinase/homoserine dehydrogenase (AK/HSD) gene, which encodes two linked key enzymes in the biosynthetic pathway of aspartate family amino acids has been studied []. The conversion of aspartate into either the storage amino acid asparagine or aspartate family amino acids may be subject to a coordinated, reciprocal metabolic control, and this biochemical branch point is a part of a larger, coordinated regulatory mechanism of nitrogen and carbon storage and utilization.; GO: 0008652 cellular amino acid biosynthetic process; PDB: 2X2W_B 2WXB_B 1B7B_C 2J4L_F 2J4K_E 2J4J_F 2OGX_B 3QUO_A 3D40_A 3D41_A ....
Probab=20.33 E-value=2.4e+02 Score=22.72 Aligned_cols=38 Identities=18% Similarity=0.326 Sum_probs=27.7
Q ss_pred hhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCccc
Q 044617 74 SHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLG 112 (265)
Q Consensus 74 ~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~ 112 (265)
..+.+.|..+++.|++++||+++ ...+...++.+++..
T Consensus 20 ~~~~~~i~~l~~~g~~vvvV~g~-g~~~~~~~~~~~~~~ 57 (242)
T PF00696_consen 20 RELADDIALLSQLGIKVVVVHGG-GSFTDELLEKYGIEP 57 (242)
T ss_dssp HHHHHHHHHHHHTTSEEEEEESS-HHHHHHHHHHCTHTT
T ss_pred HHHHHHHHHHHhCCCeEEEEECC-hhhcCchHHhccCCc
Confidence 45556667777889999999976 456777777776543
No 321
>cd02072 Glm_B12_BD B12 binding domain of glutamate mutase (Glm). Glutamate mutase catalysis the conversion of (S)-glutamate with (2S,3S)-3-methylaspartate. The rearrangement reaction is initiated by the extraction of a hydrogen from the protein-bound substrate by a 5'-desoxyadenosyl radical, which is generated by the homolytic cleavage of the organometallic bond of the cofactor B12. Glm is a heterotetrameric molecule consisting of two alpha and two epsilon polypeptide chains.
Probab=20.27 E-value=1.9e+02 Score=21.35 Aligned_cols=43 Identities=12% Similarity=0.229 Sum_probs=27.2
Q ss_pred ChhHHHHHHHHHHcCC-cEEE-EeCCCH------HHHHHHHHhcCcccccceEEe
Q 044617 73 DSHVAAAIKSAHSLGC-DLKI-VSDANQ------FYIETIMEHHGLLGCFSEIYT 119 (265)
Q Consensus 73 ~~g~~e~l~~l~~~g~-~~~i-vS~~~~------~~i~~~l~~~gl~~~f~~i~~ 119 (265)
.+.++++++.|+++|. .+-+ +-+... ......++.+|+ +.+|+
T Consensus 64 ~~~~~~~~~~l~~~gl~~v~vivGG~~~i~~~d~~~~~~~L~~~Gv----~~vf~ 114 (128)
T cd02072 64 EIDCKGLREKCDEAGLKDILLYVGGNLVVGKQDFEDVEKRFKEMGF----DRVFA 114 (128)
T ss_pred HHHHHHHHHHHHHCCCCCCeEEEECCCCCChhhhHHHHHHHHHcCC----CEEEC
Confidence 5678888888988876 4433 343321 335566888885 46665
No 322
>TIGR03556 photolyase_8HDF deoxyribodipyrimidine photo-lyase, 8-HDF type. This model describes a narrow clade of cyanobacterial deoxyribodipyrimidine photo-lyase. This group, in contrast to several closely related proteins, uses a chromophore that, in other lineages is modified further to become coenzyme F420. This chromophore is called 8-HDF in most articles on the DNA photolyase and FO in most literature on coenzyme F420.
Probab=20.00 E-value=1.5e+02 Score=27.20 Aligned_cols=39 Identities=13% Similarity=0.116 Sum_probs=29.5
Q ss_pred ChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCcc
Q 044617 73 DSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLL 111 (265)
Q Consensus 73 ~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~ 111 (265)
.++..++=+.|++.|+++.+..+.....+..+++..++.
T Consensus 54 ~esL~~L~~~L~~~G~~L~v~~G~p~~vl~~l~~~~~~~ 92 (471)
T TIGR03556 54 IGCLQELQQRYQQAGSQLLILQGDPVQLIPQLAQQLGAK 92 (471)
T ss_pred HHHHHHHHHHHHHCCCCeEEEECCHHHHHHHHHHHcCCC
Confidence 456666667788888888888887777777777777754
Done!