Query 044624
Match_columns 358
No_of_seqs 158 out of 1300
Neff 9.7
Searched_HMMs 29240
Date Mon Mar 25 08:36:59 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/044624.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/044624hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3hbf_A Flavonoid 3-O-glucosylt 100.0 2.7E-56 9.1E-61 422.7 23.5 342 1-357 18-445 (454)
2 2vch_A Hydroquinone glucosyltr 100.0 6.2E-50 2.1E-54 384.5 28.2 341 1-357 11-460 (480)
3 2pq6_A UDP-glucuronosyl/UDP-gl 100.0 3E-49 1E-53 380.6 23.4 343 1-357 13-470 (482)
4 2c1x_A UDP-glucose flavonoid 3 100.0 5E-49 1.7E-53 375.9 21.8 342 1-357 12-443 (456)
5 2acv_A Triterpene UDP-glucosyl 100.0 9.2E-48 3.2E-52 368.0 26.3 337 1-357 14-454 (463)
6 4amg_A Snogd; transferase, pol 100.0 8.4E-40 2.9E-44 307.7 14.2 321 1-347 27-385 (400)
7 2iya_A OLEI, oleandomycin glyc 100.0 2.4E-36 8.1E-41 286.6 21.7 313 1-346 17-405 (424)
8 1iir_A Glycosyltransferase GTF 100.0 1.4E-33 4.6E-38 266.9 24.4 310 1-345 5-383 (415)
9 3h4t_A Glycosyltransferase GTF 100.0 2.1E-32 7.2E-37 257.8 23.5 312 1-346 5-367 (404)
10 1rrv_A Glycosyltransferase GTF 100.0 9.7E-33 3.3E-37 261.1 19.5 312 1-345 5-384 (416)
11 3rsc_A CALG2; TDP, enediyne, s 100.0 5.2E-32 1.8E-36 255.8 20.3 312 1-346 25-397 (415)
12 3ia7_A CALG4; glycosysltransfe 100.0 1E-31 3.5E-36 252.4 20.0 315 1-346 9-382 (402)
13 2yjn_A ERYCIII, glycosyltransf 100.0 2E-32 6.8E-37 260.9 14.6 321 1-346 25-419 (441)
14 2p6p_A Glycosyl transferase; X 100.0 1.8E-31 6.1E-36 249.7 20.6 318 1-347 5-364 (384)
15 2iyf_A OLED, oleandomycin glyc 100.0 1.3E-29 4.4E-34 240.6 20.4 311 1-346 12-383 (430)
16 4fzr_A SSFS6; structural genom 100.0 4.9E-30 1.7E-34 241.1 17.2 318 1-346 20-384 (398)
17 3oti_A CALG3; calicheamicin, T 100.0 6.6E-29 2.3E-33 233.4 21.6 313 1-346 25-381 (398)
18 3tsa_A SPNG, NDP-rhamnosyltran 100.0 8.9E-28 3E-32 225.0 21.0 317 1-346 6-372 (391)
19 3otg_A CALG1; calicheamicin, T 99.9 4E-25 1.4E-29 208.3 24.4 319 1-346 25-392 (412)
20 2o6l_A UDP-glucuronosyltransfe 99.9 2.1E-22 7.1E-27 166.5 12.3 146 192-346 5-170 (170)
21 3s2u_A UDP-N-acetylglucosamine 99.9 6E-21 2E-25 177.0 18.4 293 3-340 8-338 (365)
22 1f0k_A MURG, UDP-N-acetylgluco 99.6 2E-13 6.9E-18 125.9 18.8 275 3-327 13-324 (364)
23 3hbm_A UDP-sugar hydrolase; PS 98.9 7E-08 2.4E-12 85.2 17.6 232 5-305 13-274 (282)
24 2jzc_A UDP-N-acetylglucosamine 98.9 1.4E-09 4.8E-14 92.5 5.0 109 205-323 25-196 (224)
25 2jjm_A Glycosyl transferase, g 98.5 0.0001 3.5E-09 68.0 25.1 68 262-339 296-363 (394)
26 3fro_A GLGA glycogen synthase; 98.4 5.9E-05 2E-09 70.4 22.7 69 262-341 342-411 (439)
27 3c48_A Predicted glycosyltrans 98.3 9.8E-05 3.3E-09 69.1 21.0 69 262-340 337-405 (438)
28 2gek_A Phosphatidylinositol ma 97.8 0.00042 1.4E-08 63.9 15.5 54 264-327 297-350 (406)
29 3okp_A GDP-mannose-dependent a 97.8 0.00076 2.6E-08 61.8 16.7 66 263-339 292-357 (394)
30 3dzc_A UDP-N-acetylglucosamine 97.8 0.00016 5.6E-09 67.0 12.2 52 265-327 317-368 (396)
31 2x6q_A Trehalose-synthase TRET 97.8 0.0012 4E-08 61.3 17.4 66 262-339 327-392 (416)
32 4hwg_A UDP-N-acetylglucosamine 97.6 0.0021 7.3E-08 59.2 15.8 108 208-328 203-344 (385)
33 2xci_A KDO-transferase, 3-deox 97.2 0.00064 2.2E-08 62.5 7.5 77 263-348 291-367 (374)
34 2f9f_A First mannosyl transfer 96.7 0.0017 5.8E-08 52.7 5.2 66 262-341 109-174 (177)
35 1vgv_A UDP-N-acetylglucosamine 96.7 0.0031 1.1E-07 57.6 7.2 79 265-354 292-380 (384)
36 4gyw_A UDP-N-acetylglucosamine 96.4 0.0084 2.9E-07 59.9 8.7 75 207-281 521-629 (723)
37 2iw1_A Lipopolysaccharide core 96.2 0.0042 1.4E-07 56.4 5.0 72 262-342 282-353 (374)
38 2bfw_A GLGA glycogen synthase; 96.1 0.0064 2.2E-07 49.9 5.1 55 262-327 127-182 (200)
39 3q3e_A HMW1C-like glycosyltran 96.0 0.016 5.3E-07 56.2 7.7 110 209-327 441-589 (631)
40 1v4v_A UDP-N-acetylglucosamine 95.9 0.007 2.4E-07 55.1 5.0 50 267-327 286-335 (376)
41 3qhp_A Type 1 capsular polysac 95.6 0.017 5.9E-07 45.7 5.6 69 262-341 86-155 (166)
42 3ot5_A UDP-N-acetylglucosamine 95.2 0.022 7.4E-07 52.8 5.5 55 262-327 307-362 (403)
43 2r60_A Glycosyl transferase, g 94.5 0.051 1.8E-06 51.5 6.2 56 262-327 370-425 (499)
44 3rhz_A GTF3, nucleotide sugar 94.1 0.039 1.3E-06 49.7 4.2 68 265-346 255-322 (339)
45 3beo_A UDP-N-acetylglucosamine 93.8 0.051 1.8E-06 49.1 4.5 52 265-327 292-343 (375)
46 3oy2_A Glycosyltransferase B73 92.1 0.18 6E-06 46.2 5.5 54 262-327 285-356 (413)
47 2x0d_A WSAF; GT4 family, trans 92.0 0.12 4E-06 47.9 4.2 57 265-336 329-385 (413)
48 2r60_A Glycosyl transferase, g 91.9 0.28 9.5E-06 46.3 6.8 112 6-138 32-152 (499)
49 3s28_A Sucrose synthase 1; gly 91.5 0.21 7.3E-06 50.3 5.7 56 262-327 676-735 (816)
50 2vsy_A XCC0866; transferase, g 91.2 0.2 7E-06 48.1 5.2 57 262-327 464-523 (568)
51 2qzs_A Glycogen synthase; glyc 90.2 0.51 1.8E-05 44.2 6.8 56 262-327 378-445 (485)
52 1rzu_A Glycogen synthase 1; gl 89.8 0.55 1.9E-05 44.0 6.6 56 262-327 377-444 (485)
53 2iuy_A Avigt4, glycosyltransfe 89.5 0.35 1.2E-05 42.9 4.9 51 264-325 255-307 (342)
54 1vgv_A UDP-N-acetylglucosamine 88.2 1.4 4.9E-05 39.5 8.1 101 6-137 9-118 (384)
55 2hy7_A Glucuronosyltransferase 88.0 0.47 1.6E-05 43.6 4.7 50 262-327 296-353 (406)
56 1v4v_A UDP-N-acetylglucosamine 87.7 2.1 7.2E-05 38.3 8.9 39 91-136 81-122 (376)
57 3vue_A GBSS-I, granule-bound s 87.0 2.9 9.8E-05 40.0 9.7 56 265-325 416-476 (536)
58 2iw1_A Lipopolysaccharide core 86.4 1.1 3.7E-05 40.1 6.1 44 5-56 12-55 (374)
59 2iuy_A Avigt4, glycosyltransfe 86.1 0.58 2E-05 41.5 4.1 81 7-136 30-110 (342)
60 2wqk_A 5'-nucleotidase SURE; S 85.4 0.73 2.5E-05 39.3 4.1 26 13-40 17-42 (251)
61 3s28_A Sucrose synthase 1; gly 85.3 0.97 3.3E-05 45.6 5.6 109 15-138 318-439 (816)
62 3tov_A Glycosyl transferase fa 84.5 21 0.00073 31.6 16.6 97 3-134 15-115 (349)
63 2phj_A 5'-nucleotidase SURE; S 81.2 1.9 6.4E-05 36.7 4.9 26 13-40 17-42 (251)
64 3beo_A UDP-N-acetylglucosamine 80.1 9.5 0.00033 33.8 9.7 104 6-136 17-126 (375)
65 1j9j_A Stationary phase surviV 71.1 10 0.00036 32.0 6.8 27 13-41 16-42 (247)
66 1l5x_A SurviVal protein E; str 66.1 8.9 0.00031 33.1 5.4 27 13-41 16-42 (280)
67 3nb0_A Glycogen [starch] synth 65.7 3 0.0001 41.0 2.5 23 262-284 530-552 (725)
68 1psw_A ADP-heptose LPS heptosy 65.6 31 0.0011 30.1 9.3 38 4-42 8-47 (348)
69 2e6c_A 5'-nucleotidase SURE; S 62.8 18 0.00061 30.5 6.5 41 13-55 16-56 (244)
70 1uqt_A Alpha, alpha-trehalose- 62.2 18 0.00062 33.8 7.3 53 262-327 362-420 (482)
71 3t5t_A Putative glycosyltransf 59.0 14 0.00049 34.7 5.9 54 262-327 382-439 (496)
72 1kjn_A MTH0777; hypotethical p 58.4 7 0.00024 30.0 2.9 31 12-43 24-54 (157)
73 3ot5_A UDP-N-acetylglucosamine 58.2 11 0.00036 34.5 4.8 41 89-136 102-145 (403)
74 3to5_A CHEY homolog; alpha(5)b 53.6 21 0.00072 26.8 5.1 31 108-138 57-96 (134)
75 3ors_A N5-carboxyaminoimidazol 52.3 60 0.0021 25.3 7.4 79 264-349 72-156 (163)
76 2yvq_A Carbamoyl-phosphate syn 51.8 27 0.00091 26.6 5.4 87 11-135 37-131 (143)
77 2x0d_A WSAF; GT4 family, trans 51.6 5.6 0.00019 36.5 1.7 24 11-35 66-89 (413)
78 2lnd_A De novo designed protei 51.1 13 0.00043 25.0 2.9 48 273-325 50-100 (112)
79 3oow_A Phosphoribosylaminoimid 51.1 74 0.0025 24.9 7.7 77 266-350 76-159 (166)
80 1g5t_A COB(I)alamin adenosyltr 50.0 99 0.0034 24.9 8.8 32 2-34 34-65 (196)
81 2hy7_A Glucuronosyltransferase 49.9 58 0.002 29.3 8.4 19 14-34 34-52 (406)
82 2lpm_A Two-component response 49.0 10 0.00035 28.1 2.5 28 108-135 53-85 (123)
83 2qzs_A Glycogen synthase; glyc 48.0 11 0.00039 34.8 3.3 27 8-35 18-44 (485)
84 1rzu_A Glycogen synthase 1; gl 47.0 12 0.00042 34.6 3.4 28 7-35 17-44 (485)
85 3kuu_A Phosphoribosylaminoimid 46.4 71 0.0024 25.2 7.0 78 266-350 83-166 (174)
86 2xci_A KDO-transferase, 3-deox 45.1 54 0.0019 29.2 7.3 27 6-34 49-75 (374)
87 4dzz_A Plasmid partitioning pr 44.9 97 0.0033 24.3 8.3 32 5-37 11-42 (206)
88 3vue_A GBSS-I, granule-bound s 43.9 13 0.00044 35.4 3.0 22 12-34 31-52 (536)
89 1qkk_A DCTD, C4-dicarboxylate 43.0 47 0.0016 24.7 5.8 68 272-349 73-140 (155)
90 3pdi_B Nitrogenase MOFE cofact 40.9 36 0.0012 31.6 5.4 35 92-136 366-400 (458)
91 3p9x_A Phosphoribosylglycinami 40.1 34 0.0012 28.1 4.6 158 91-323 14-174 (211)
92 3trh_A Phosphoribosylaminoimid 39.1 1.4E+02 0.0047 23.4 8.1 34 311-349 126-159 (169)
93 1o97_C Electron transferring f 38.6 51 0.0018 28.0 5.7 41 91-138 102-148 (264)
94 3tqr_A Phosphoribosylglycinami 38.4 37 0.0013 27.9 4.5 157 92-323 18-176 (215)
95 1xmp_A PURE, phosphoribosylami 38.0 87 0.003 24.5 6.3 133 209-350 12-165 (170)
96 2iz6_A Molybdenum cofactor car 37.6 33 0.0011 27.2 4.0 22 262-283 116-140 (176)
97 3gl9_A Response regulator; bet 37.5 45 0.0015 23.6 4.6 31 108-138 46-85 (122)
98 3zzm_A Bifunctional purine bio 37.4 59 0.002 30.4 6.1 88 11-117 21-111 (523)
99 1u11_A PURE (N5-carboxyaminoim 36.9 1E+02 0.0036 24.4 6.7 134 208-350 21-175 (182)
100 1meo_A Phosophoribosylglycinam 36.7 45 0.0015 27.2 4.8 157 93-323 14-172 (209)
101 1hjr_A Holliday junction resol 36.5 59 0.002 25.2 5.2 46 87-139 45-105 (158)
102 4ds3_A Phosphoribosylglycinami 36.2 41 0.0014 27.5 4.5 158 91-323 19-179 (209)
103 1efv_B Electron transfer flavo 35.2 63 0.0022 27.3 5.6 41 91-138 106-152 (255)
104 3lp6_A Phosphoribosylaminoimid 35.0 1.6E+02 0.0056 23.1 8.6 73 266-348 78-157 (174)
105 1o4v_A Phosphoribosylaminoimid 34.9 1.3E+02 0.0045 23.8 7.0 16 332-347 147-162 (183)
106 1efp_B ETF, protein (electron 34.8 62 0.0021 27.2 5.6 40 92-138 104-149 (252)
107 4grd_A N5-CAIR mutase, phospho 34.5 64 0.0022 25.4 5.0 132 208-349 12-165 (173)
108 2q5c_A NTRC family transcripti 33.3 50 0.0017 26.6 4.5 120 8-142 36-173 (196)
109 4ep4_A Crossover junction endo 32.9 1.3E+02 0.0045 23.4 6.7 46 87-139 49-109 (166)
110 1pno_A NAD(P) transhydrogenase 32.8 45 0.0015 26.1 3.8 25 10-35 40-64 (180)
111 3m6m_D Sensory/regulatory prot 32.6 56 0.0019 23.9 4.6 31 108-138 58-99 (143)
112 1d4o_A NADP(H) transhydrogenas 32.3 46 0.0016 26.2 3.8 24 10-34 39-62 (184)
113 4b4o_A Epimerase family protei 31.9 27 0.00092 29.8 2.9 20 14-34 14-33 (298)
114 2gk4_A Conserved hypothetical 31.7 34 0.0012 28.5 3.3 21 14-35 33-53 (232)
115 3cg0_A Response regulator rece 31.6 95 0.0033 22.2 5.7 32 108-139 54-92 (140)
116 4ehi_A Bifunctional purine bio 31.1 53 0.0018 30.8 4.7 46 12-68 36-81 (534)
117 1qv9_A F420-dependent methylen 30.7 2.4E+02 0.008 23.6 8.6 109 202-325 24-149 (283)
118 3tl4_X Glutaminyl-tRNA synthet 30.6 22 0.00075 28.6 1.9 52 285-346 100-154 (187)
119 2q6t_A DNAB replication FORK h 30.3 1.1E+02 0.0037 28.1 6.9 37 3-39 207-243 (444)
120 3f6p_A Transcriptional regulat 30.1 84 0.0029 22.0 5.0 31 108-138 46-82 (120)
121 1jkx_A GART;, phosphoribosylgl 30.0 71 0.0024 26.0 5.0 158 92-323 13-172 (212)
122 2fsv_C NAD(P) transhydrogenase 30.0 51 0.0017 26.4 3.8 24 10-34 63-86 (203)
123 2l82_A Designed protein OR32; 29.5 1.5E+02 0.0051 21.1 5.8 36 209-248 2-37 (162)
124 1djl_A Transhydrogenase DIII; 29.2 54 0.0018 26.4 3.8 24 10-34 62-85 (207)
125 3gi1_A LBP, laminin-binding pr 28.8 2.4E+02 0.0081 24.0 8.4 30 108-137 228-259 (286)
126 3kcq_A Phosphoribosylglycinami 28.2 55 0.0019 26.8 4.0 44 91-135 20-64 (215)
127 4hn9_A Iron complex transport 27.8 44 0.0015 29.2 3.6 31 108-138 116-146 (335)
128 1tmy_A CHEY protein, TMY; chem 27.1 1.4E+02 0.0049 20.4 5.9 32 108-139 47-85 (120)
129 3c3m_A Response regulator rece 27.0 1E+02 0.0035 22.1 5.2 31 108-138 47-86 (138)
130 1p9o_A Phosphopantothenoylcyst 26.8 37 0.0013 29.7 2.9 31 3-36 60-90 (313)
131 2etv_A Iron(III) ABC transport 26.8 67 0.0023 28.2 4.7 30 108-137 96-126 (346)
132 2w36_A Endonuclease V; hypoxan 26.8 67 0.0023 26.6 4.2 43 91-138 91-140 (225)
133 3lyu_A Putative hydrogenase; t 26.1 57 0.0019 24.5 3.5 23 10-34 30-52 (142)
134 2bru_C NAD(P) transhydrogenase 25.5 53 0.0018 25.8 3.1 25 10-35 47-71 (186)
135 3da8_A Probable 5'-phosphoribo 25.4 58 0.002 26.7 3.6 157 91-323 24-182 (215)
136 3qxc_A Dethiobiotin synthetase 25.4 1.3E+02 0.0043 25.1 5.8 45 90-139 118-171 (242)
137 3md9_A Hemin-binding periplasm 24.8 64 0.0022 26.7 4.0 29 108-136 59-89 (255)
138 2gkg_A Response regulator homo 24.6 1.2E+02 0.0041 21.0 5.0 49 272-327 78-126 (127)
139 1mio_B Nitrogenase molybdenum 24.5 68 0.0023 29.6 4.4 33 93-135 377-409 (458)
140 2a9o_A Response regulator; ess 24.4 1.7E+02 0.0059 19.9 6.0 32 108-139 45-82 (120)
141 1srr_A SPO0F, sporulation resp 24.4 1.6E+02 0.0053 20.4 5.7 31 108-138 47-84 (124)
142 3u7q_A Nitrogenase molybdenum- 24.3 83 0.0028 29.4 4.9 36 91-136 407-442 (492)
143 3kkj_A Amine oxidase, flavin-c 24.2 40 0.0014 27.4 2.6 18 14-32 15-32 (336)
144 1f9y_A HPPK, protein (6-hydrox 24.1 1.2E+02 0.0041 23.5 5.0 28 210-237 2-29 (158)
145 3rg8_A Phosphoribosylaminoimid 24.0 2.5E+02 0.0086 21.7 9.4 27 220-246 40-67 (159)
146 2cob_A LCOR protein; MLR2, KIA 23.7 82 0.0028 20.7 3.3 30 308-340 11-40 (70)
147 3a10_A Response regulator; pho 23.7 1.7E+02 0.0058 19.8 5.7 31 108-138 45-82 (116)
148 3goc_A Endonuclease V; alpha-b 23.7 1E+02 0.0035 25.7 4.7 42 91-137 95-143 (237)
149 2qx0_A 7,8-dihydro-6-hydroxyme 23.5 1.5E+02 0.0052 22.9 5.5 28 210-237 3-30 (159)
150 1mb3_A Cell division response 23.1 1.6E+02 0.0055 20.3 5.5 31 108-138 45-84 (124)
151 2jk1_A HUPR, hydrogenase trans 23.1 1.8E+02 0.0062 20.7 5.9 63 273-345 71-134 (139)
152 1zgz_A Torcad operon transcrip 23.0 1.4E+02 0.0048 20.6 5.2 31 108-138 46-82 (122)
153 3mc3_A DSRE/DSRF-like family p 22.7 76 0.0026 23.6 3.6 32 7-39 29-60 (134)
154 3ip0_A 2-amino-4-hydroxy-6-hyd 22.6 1.3E+02 0.0045 23.2 5.0 27 210-236 2-28 (158)
155 3qjg_A Epidermin biosynthesis 22.5 65 0.0022 25.4 3.3 31 9-40 17-47 (175)
156 3cfy_A Putative LUXO repressor 22.5 1.8E+02 0.0062 20.7 5.8 31 108-138 48-85 (137)
157 2pju_A Propionate catabolism o 22.0 79 0.0027 26.1 3.8 41 90-137 140-180 (225)
158 3aek_B Light-independent proto 21.8 88 0.003 29.5 4.6 26 108-136 349-374 (525)
159 3hv2_A Response regulator/HD d 21.3 1.5E+02 0.0051 21.7 5.2 31 108-138 58-95 (153)
160 2xdq_B Light-independent proto 21.3 71 0.0024 30.0 3.8 35 92-136 363-397 (511)
161 3qbc_A 2-amino-4-hydroxy-6-hyd 21.2 1.5E+02 0.0051 23.0 5.0 27 210-236 6-32 (161)
162 2r7a_A Bacterial heme binding 21.1 84 0.0029 26.0 4.0 29 108-136 59-89 (256)
163 2q8p_A Iron-regulated surface 21.1 66 0.0023 26.7 3.3 30 108-137 60-90 (260)
164 1xhf_A DYE resistance, aerobic 21.0 1.9E+02 0.0063 19.9 5.5 31 108-138 47-83 (123)
165 3pdi_A Nitrogenase MOFE cofact 20.8 74 0.0025 29.7 3.8 35 92-136 392-426 (483)
166 3av3_A Phosphoribosylglycinami 20.8 1.2E+02 0.004 24.7 4.6 142 108-323 32-175 (212)
167 3auf_A Glycinamide ribonucleot 20.6 1.2E+02 0.0041 25.1 4.7 142 108-323 51-194 (229)
168 1cbk_A Protein (7,8-dihydro-6- 20.5 1.5E+02 0.005 23.0 4.8 27 210-236 3-29 (160)
169 4as2_A Phosphorylcholine phosp 20.2 72 0.0025 28.0 3.4 24 10-34 145-168 (327)
No 1
>3hbf_A Flavonoid 3-O-glucosyltransferase; glycosyltransferase, GT-B fold, GT1, phenylpropanoid metabolism; HET: UDP MYC; 2.10A {Medicago truncatula} SCOP: c.87.1.0 PDB: 3hbj_A*
Probab=100.00 E-value=2.7e-56 Score=422.72 Aligned_cols=342 Identities=24% Similarity=0.337 Sum_probs=249.2
Q ss_pred CcccCCCcChHHHHHHHHHHHhCCC--cEEEEEeCCcchhhhhhcCCC-CCCeEEEeccCCccCCCCCCCCCCCCCCCch
Q 044624 1 MLPFMAQGHVIPFLALAHHLESTKN--YTIAFVNTHLNIKKIKSSLPQ-SSPIHFLETPFNIIDHDLPPCTENTDSHPFD 77 (358)
Q Consensus 1 ~~~~p~~GH~~P~l~La~~L~~~rG--h~Vt~~t~~~~~~~~~~~~~~-~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~ 77 (358)
++|+|++||++||++||+.|++ +| |.|||++++.+...+.+.... .++++|..+| ++++++.+...+ ...
T Consensus 18 ~~P~p~~GHi~P~l~Lak~L~~-~g~~~~vT~~~t~~~~~~~~~~~~~~~~~i~~~~ip-----dglp~~~~~~~~-~~~ 90 (454)
T 3hbf_A 18 VLAFPFGTHAAPLLSLVKKIAT-EAPKVTFSFFCTTTTNDTLFSRSNEFLPNIKYYNVH-----DGLPKGYVSSGN-PRE 90 (454)
T ss_dssp EECCCSSSSHHHHHHHHHHHHH-HCTTSEEEEEECHHHHHHSCSSSSCCCTTEEEEECC-----CCCCTTCCCCSC-TTH
T ss_pred EEcCCcccHHHHHHHHHHHHHh-CCCCEEEEEEeCHHHHHhhhcccccCCCCceEEecC-----CCCCCCccccCC-hHH
Confidence 5899999999999999999999 99 999999998776665432210 1579999887 577766544332 222
Q ss_pred HHHHHHHHHhhchHHHHHHHHHHhhhcCCCCCcEEEECCCCccHHHHHHHhCCceEEEcchhHHHHHHHhhhhccCCCCC
Q 044624 78 VVRKLLEATLSFKPHFKKLIIDLIDEQNGHKPLCIITDMFFGWCKEIAQEYGIFHAIFIEGGGFGFACYYSLWVDLPHRN 157 (358)
Q Consensus 78 ~~~~~~~~~~~~~~~l~~ll~~~~~~~~~~~pd~vV~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~p~~~ 157 (358)
.+..+.. ...+.+++.++++.+.... ++||||+|.+++|+.++|+++|||++.|++++++.++.+.+.+......+
T Consensus 91 ~~~~~~~---~~~~~~~~~l~~~~~~~~~-~~~~iI~D~~~~w~~~vA~~lgIP~~~f~t~~a~~~~~~~~~~~~~~~~~ 166 (454)
T 3hbf_A 91 PIFLFIK---AMQENFKHVIDEAVAETGK-NITCLVTDAFFWFGADLAEEMHAKWVPLWTAGPHSLLTHVYTDLIREKTG 166 (454)
T ss_dssp HHHHHHH---HHHHHHHHHHHHHHHHHCC-CCCEEEEETTCTTHHHHHHHTTCEEEEEECSCHHHHHHHHTHHHHHHTCC
T ss_pred HHHHHHH---HHHHHHHHHHHHHHhhcCC-CCcEEEECCcchHHHHHHHHhCCCEEEEeCccHHHHHHHHhhHHHHhhcC
Confidence 2223332 2334445555443222122 78999999999999999999999999999999888776665322110000
Q ss_pred ----CCCCcc-ccCCCCC--------Ccc-------c--------------------------------Cccccc---CC
Q 044624 158 ----TDSDEF-LLLDFPE--------AST-------I--------------------------------HPVLRF---TG 182 (358)
Q Consensus 158 ----~~~~~~-~~p~~~~--------~~~-------~--------------------------------~p~~~~---~~ 182 (358)
...+.. .+|++|. .+. + ++..+. +|
T Consensus 167 ~~~~~~~~~~~~iPg~p~~~~~dlp~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~ns~~eLE~~~~~~~~~~~~~v~~vG 246 (454)
T 3hbf_A 167 SKEVHDVKSIDVLPGFPELKASDLPEGVIKDIDVPFATMLHKMGLELPRANAVAINSFATIHPLIENELNSKFKLLLNVG 246 (454)
T ss_dssp HHHHTTSSCBCCSTTSCCBCGGGSCTTSSSCTTSHHHHHHHHHHHHGGGSSCEEESSCGGGCHHHHHHHHTTSSCEEECC
T ss_pred CCccccccccccCCCCCCcChhhCchhhccCCchHHHHHHHHHHHhhccCCEEEECChhHhCHHHHHHHHhcCCCEEEEC
Confidence 000001 1333321 000 0 011111 13
Q ss_pred CCCC-CCCCCCCChhHHHHHhhcCCCCceEEEEeccCCCCCHHHHHHHHHHHHhCCCcEEEEecCCC------CCCC---
Q 044624 183 SKAG-AGKEHGISAELCKNWLDRKPCRSVLYVSFGSQDTIAVSQMVQLAMALEASGKNFIWIVRPPI------GFDI--- 252 (358)
Q Consensus 183 ~~~~-~~~~~~~~~~~~~~wld~~~~~~vvyvs~GS~~~~~~~~~~~~~~al~~~~~~~lw~~~~~~------~~~~--- 252 (358)
+... ........+.+|.+|||.++++|||||||||+...+.+++.+++++|+.++++|||+++... ++..
T Consensus 247 Pl~~~~~~~~~~~~~~~~~wLd~~~~~~vVyvsfGS~~~~~~~~~~el~~~l~~~~~~flw~~~~~~~~~lp~~~~~~~~ 326 (454)
T 3hbf_A 247 PFNLTTPQRKVSDEHGCLEWLDQHENSSVVYISFGSVVTPPPHELTALAESLEECGFPFIWSFRGDPKEKLPKGFLERTK 326 (454)
T ss_dssp CHHHHSCCSCCCCTTCHHHHHHTSCTTCEEEEECCSSCCCCHHHHHHHHHHHHHHCCCEEEECCSCHHHHSCTTHHHHTT
T ss_pred CcccccccccccchHHHHHHHhcCCCCceEEEecCCCCcCCHHHHHHHHHHHHhCCCeEEEEeCCcchhcCCHhHHhhcC
Confidence 3211 00111233567999999998899999999999998999999999999999999999998642 1111
Q ss_pred CCCCCcccc-----------------cCCcchhhhhhcCcceEeccccccchhhhhhhhccccceEEecccCCccccHHH
Q 044624 253 NSEFRANDA-----------------DGTQSALEALSHGVPINGWPLAAEQFYNSNLLGEEVGVCAEVARGMNCAVLKEH 315 (358)
Q Consensus 253 ~~~~~~~wl-----------------gG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~ 315 (358)
....+.+|+ |||||++||+++|||||++|+++||+.||+++++.||+|+.++. +.+++++
T Consensus 327 ~~~~vv~w~Pq~~vL~h~~v~~fvtH~G~~S~~Eal~~GvP~i~~P~~~DQ~~Na~~v~~~~g~Gv~l~~---~~~~~~~ 403 (454)
T 3hbf_A 327 TKGKIVAWAPQVEILKHSSVGVFLTHSGWNSVLECIVGGVPMISRPFFGDQGLNTILTESVLEIGVGVDN---GVLTKES 403 (454)
T ss_dssp TTEEEESSCCHHHHHHSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHTTSCSEEECGG---GSCCHHH
T ss_pred CceEEEeeCCHHHHHhhcCcCeEEecCCcchHHHHHHcCCCEecCcccccHHHHHHHHHHhhCeeEEecC---CCCCHHH
Confidence 112344665 99999999999999999999999999999999987899999986 6899999
Q ss_pred HHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHhhcc-CccccCC
Q 044624 316 IVVKIELVMNETEKGKPMRMKDLEVKEIIDNAFRN-DENLRDL 357 (358)
Q Consensus 316 l~~ai~~ll~~~~~~~~~r~~a~~l~~~~~~a~~~-gss~~~~ 357 (358)
|+++|+++|+|+ ++++||+||+++++++++|+.+ |||++||
T Consensus 404 l~~av~~ll~~~-~~~~~r~~a~~l~~~~~~a~~~gGsS~~~l 445 (454)
T 3hbf_A 404 IKKALELTMSSE-KGGIMRQKIVKLKESAFKAVEQNGTSAMDF 445 (454)
T ss_dssp HHHHHHHHHSSH-HHHHHHHHHHHHHHHHHHHTSTTSHHHHHH
T ss_pred HHHHHHHHHCCC-hHHHHHHHHHHHHHHHHHhhccCCCHHHHH
Confidence 999999999886 7889999999999999999999 9999875
No 2
>2vch_A Hydroquinone glucosyltransferase; glycosyltransferase, N-glucosyltransferase, UDP-glucose- dependent, plant glycosyltransferase; HET: UDP; 1.45A {Arabidopsis thaliana} SCOP: c.87.1.10 PDB: 2vce_A* 2vg8_A*
Probab=100.00 E-value=6.2e-50 Score=384.48 Aligned_cols=341 Identities=28% Similarity=0.410 Sum_probs=236.2
Q ss_pred CcccCCCcChHHHHHHHHHHHhCC-CcEEEEEeCCc--chhhhhhcCCC-CCCeEEEeccCCccCCCCCCCCCCCCCCCc
Q 044624 1 MLPFMAQGHVIPFLALAHHLESTK-NYTIAFVNTHL--NIKKIKSSLPQ-SSPIHFLETPFNIIDHDLPPCTENTDSHPF 76 (358)
Q Consensus 1 ~~~~p~~GH~~P~l~La~~L~~~r-Gh~Vt~~t~~~--~~~~~~~~~~~-~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~ 76 (358)
++|+|++||++||+.||++|++ | ||+|||++++. +...+.+.... ..+++|+.+|.. ..+. .. .. .
T Consensus 11 ~~p~p~~GHv~P~l~La~~L~~-r~Gh~Vt~~t~~~~~~~~~~~~~~~~~~~~i~~~~l~~~----~~~~-~~--~~-~- 80 (480)
T 2vch_A 11 IIPSPGMGHLIPLVEFAKRLVH-LHGLTVTFVIAGEGPPSKAQRTVLDSLPSSISSVFLPPV----DLTD-LS--SS-T- 80 (480)
T ss_dssp EECCSCHHHHHHHHHHHHHHHH-HHCCEEEEEECCSSSCC-CHHHHHC-CCTTEEEEECCCC----CCTT-SC--TT-C-
T ss_pred EecCcchhHHHHHHHHHHHHHh-CCCCEEEEEECCCcchhhhhhhhccccCCCceEEEcCCC----CCCC-CC--Cc-h-
Confidence 5899999999999999999999 9 99999999987 34433321000 168999988742 1111 11 11 1
Q ss_pred hHHHHHHHHHhhchHHHHHHHHHHhhhcCCCCC-cEEEECCCCccHHHHHHHhCCceEEEcchhHHHHHHHhhhhc----
Q 044624 77 DVVRKLLEATLSFKPHFKKLIIDLIDEQNGHKP-LCIITDMFFGWCKEIAQEYGIFHAIFIEGGGFGFACYYSLWV---- 151 (358)
Q Consensus 77 ~~~~~~~~~~~~~~~~l~~ll~~~~~~~~~~~p-d~vV~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~---- 151 (358)
.....+......+.+.+++++++..+ .. ++ ||||+|.++.|+..+|+++|||++.++++++.....+.+++.
T Consensus 81 ~~~~~~~~~~~~~~~~l~~ll~~~~~--~~-~~pd~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~ 157 (480)
T 2vch_A 81 RIESRISLTVTRSNPELRKVFDSFVE--GG-RLPTALVVDLFGTDAFDVAVEFHVPPYIFYPTTANVLSFFLHLPKLDET 157 (480)
T ss_dssp CHHHHHHHHHHTTHHHHHHHHHHHHH--TT-CCCSEEEECTTCGGGHHHHHHTTCCEEEEECSCHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHhhhHHHHHHHHHhcc--CC-CCCeEEEECCcchhHHHHHHHcCCCEEEEECccHHHHHHHHHHHHHHhc
Confidence 11222333445667888888887531 12 67 999999999999999999999999999998765544332110
Q ss_pred ------------cCCCCC------CC---CC---c-----------------cccCCCCCCcc-------------cCcc
Q 044624 152 ------------DLPHRN------TD---SD---E-----------------FLLLDFPEAST-------------IHPV 177 (358)
Q Consensus 152 ------------~~p~~~------~~---~~---~-----------------~~~p~~~~~~~-------------~~p~ 177 (358)
..|... .. .+ . ..+..+.. +. ..++
T Consensus 158 ~~~~~~~~~~~~~~Pg~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~nt~~e-le~~~~~~l~~~~~~~~~v 236 (480)
T 2vch_A 158 VSCEFRELTEPLMLPGCVPVAGKDFLDPAQDRKDDAYKWLLHNTKRYKEAEGILVNTFFE-LEPNAIKALQEPGLDKPPV 236 (480)
T ss_dssp CCSCGGGCSSCBCCTTCCCBCGGGSCGGGSCTTSHHHHHHHHHHHHGGGCSEEEESCCTT-TSHHHHHHHHSCCTTCCCE
T ss_pred CCCcccccCCcccCCCCCCCChHHCchhhhcCCchHHHHHHHHHHhcccCCEEEEcCHHH-HhHHHHHHHHhcccCCCcE
Confidence 001000 00 00 0 00000000 00 0011
Q ss_pred cccCCCCCCCCCCC--CCChhHHHHHhhcCCCCceEEEEeccCCCCCHHHHHHHHHHHHhCCCcEEEEecCCCC------
Q 044624 178 LRFTGSKAGAGKEH--GISAELCKNWLDRKPCRSVLYVSFGSQDTIAVSQMVQLAMALEASGKNFIWIVRPPIG------ 249 (358)
Q Consensus 178 ~~~~~~~~~~~~~~--~~~~~~~~~wld~~~~~~vvyvs~GS~~~~~~~~~~~~~~al~~~~~~~lw~~~~~~~------ 249 (358)
.+ +|+........ ...+.+|.+|||++++++||||||||+...+.+++.+++++|+.++++|||+++....
T Consensus 237 ~~-vGpl~~~~~~~~~~~~~~~~~~wLd~~~~~~vvyvs~GS~~~~~~~~~~~~~~al~~~~~~~lw~~~~~~~~~~~~~ 315 (480)
T 2vch_A 237 YP-VGPLVNIGKQEAKQTEESECLKWLDNQPLGSVLYVSFGSGGTLTCEQLNELALGLADSEQRFLWVIRSPSGIANSSY 315 (480)
T ss_dssp EE-CCCCCCCSCSCC-----CHHHHHHHTSCTTCEEEEECTTTCCCCHHHHHHHHHHHHHTTCEEEEEECCCCSSTTTTT
T ss_pred EE-EeccccccccccCccchhHHHHHhcCCCCCceEEEecccccCCCHHHHHHHHHHHHhcCCcEEEEECCccccccccc
Confidence 11 13332111110 2245689999999888899999999999889999999999999999999999986421
Q ss_pred --------CC-CCCC----------CCc-ccc-----------------cCCcchhhhhhcCcceEeccccccchhhhhh
Q 044624 250 --------FD-INSE----------FRA-NDA-----------------DGTQSALEALSHGVPINGWPLAAEQFYNSNL 292 (358)
Q Consensus 250 --------~~-~~~~----------~~~-~wl-----------------gG~~s~~eal~~GvP~l~~P~~~DQ~~na~~ 292 (358)
.. ..++ .+. +|+ |||||++||+++|||||++|+++||+.||++
T Consensus 316 ~~~~~~~~~~~~lp~~~~~~~~~~g~~v~~w~Pq~~vL~h~~v~~fvtHgG~~S~~Eal~~GvP~i~~P~~~DQ~~na~~ 395 (480)
T 2vch_A 316 FDSHSQTDPLTFLPPGFLERTKKRGFVIPFWAPQAQVLAHPSTGGFLTHCGWNSTLESVVSGIPLIAWPLYAEQKMNAVL 395 (480)
T ss_dssp TCC--CSCGGGGSCTTHHHHTTTTEEEEESCCCHHHHHHSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHH
T ss_pred cccccccchhhhcCHHHHHHhCCCeEEEeCccCHHHHhCCCCcCeEEecccchhHHHHHHcCCCEEeccccccchHHHHH
Confidence 10 1111 122 375 9999999999999999999999999999999
Q ss_pred hhccccceEEecccCCccccHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHhhcc-CccccCC
Q 044624 293 LGEEVGVCAEVARGMNCAVLKEHIVVKIELVMNETEKGKPMRMKDLEVKEIIDNAFRN-DENLRDL 357 (358)
Q Consensus 293 v~~~~G~G~~l~~~~~~~~~~~~l~~ai~~ll~~~~~~~~~r~~a~~l~~~~~~a~~~-gss~~~~ 357 (358)
+++.+|+|+.++..+++.+++++|+++|+++|+++ ++++||+||+++++++++|+++ |||..+|
T Consensus 396 l~~~~G~g~~l~~~~~~~~~~~~l~~av~~vl~~~-~~~~~r~~a~~l~~~~~~a~~~gGss~~~~ 460 (480)
T 2vch_A 396 LSEDIRAALRPRAGDDGLVRREEVARVVKGLMEGE-EGKGVRNKMKELKEAACRVLKDDGTSTKAL 460 (480)
T ss_dssp HHHTTCCEECCCCCTTSCCCHHHHHHHHHHHHTST-HHHHHHHHHHHHHHHHHHHTSTTSHHHHHH
T ss_pred HHHHhCeEEEeecccCCccCHHHHHHHHHHHhcCc-chHHHHHHHHHHHHHHHHHHhcCCCHHHHH
Confidence 86566999999763223799999999999999965 5559999999999999999999 9988764
No 3
>2pq6_A UDP-glucuronosyl/UDP-glucosyltransferase; glycosylation, isoflavonoid, uridine diphosphate glycosyltransferase; 2.10A {Medicago truncatula} SCOP: c.87.1.10
Probab=100.00 E-value=3e-49 Score=380.63 Aligned_cols=343 Identities=24% Similarity=0.422 Sum_probs=238.5
Q ss_pred CcccCCCcChHHHHHHHHHHHhCCCcEEEEEeCCcchhhhhhcCCC-----CCCeEEEeccCCccCCCCCCCCCCCCCCC
Q 044624 1 MLPFMAQGHVIPFLALAHHLESTKNYTIAFVNTHLNIKKIKSSLPQ-----SSPIHFLETPFNIIDHDLPPCTENTDSHP 75 (358)
Q Consensus 1 ~~~~p~~GH~~P~l~La~~L~~~rGh~Vt~~t~~~~~~~~~~~~~~-----~~~~~~~~~p~~~~~~~~~~~~~~~~~~~ 75 (358)
++|+|++||++||+.||++|++ |||+|||++++.+...+.+.... .++++|+.+| ++++........ .
T Consensus 13 ~~p~p~~GHi~P~l~La~~L~~-rG~~VT~v~t~~~~~~~~~~~~~~~~~~~~~i~~~~l~-----~~lp~~~~~~~~-~ 85 (482)
T 2pq6_A 13 MIPYPVQGHINPLFKLAKLLHL-RGFHITFVNTEYNHKRLLKSRGPKAFDGFTDFNFESIP-----DGLTPMEGDGDV-S 85 (482)
T ss_dssp EECCSSHHHHHHHHHHHHHHHH-TTCEEEEEEEHHHHHHHC------------CEEEEEEC-----CCCC----------
T ss_pred EecCccchhHHHHHHHHHHHHh-CCCeEEEEeCCchhhhhccccccccccCCCceEEEECC-----CCCCCcccccCc-c
Confidence 5899999999999999999999 99999999998877666442110 0379999887 344441100010 1
Q ss_pred chHHHHHHHHH-hhchHHHHHHHHHHhhhc-CCCCCcEEEECCCCccHHHHHHHhCCceEEEcchhHHHHHHHhhh----
Q 044624 76 FDVVRKLLEAT-LSFKPHFKKLIIDLIDEQ-NGHKPLCIITDMFFGWCKEIAQEYGIFHAIFIEGGGFGFACYYSL---- 149 (358)
Q Consensus 76 ~~~~~~~~~~~-~~~~~~l~~ll~~~~~~~-~~~~pd~vV~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~---- 149 (358)
.....+...+ ..+.+.++++++.+.+.. .. ++||||+|.+++|+..+|+++|||++.++++++.....+.+.
T Consensus 86 -~~~~~~~~~~~~~~~~~l~~ll~~l~~~~~~~-~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~~~ 163 (482)
T 2pq6_A 86 -QDVPTLCQSVRKNFLKPYCELLTRLNHSTNVP-PVTCLVSDCCMSFTIQAAEEFELPNVLYFSSSACSLLNVMHFRSFV 163 (482)
T ss_dssp -CCHHHHHHHHTTSSHHHHHHHHHHHHTCSSSC-CCCEEEEETTCTHHHHHHHHTTCCEEEEECSCHHHHHHHTTHHHHH
T ss_pred -hhHHHHHHHHHHHhhHHHHHHHHHHhhhccCC-CceEEEECCcchhHHHHHHHcCCCEEEEecccHHHHHHHHHHHHHH
Confidence 1123344444 567788888888764210 12 799999999999999999999999999999887665443221
Q ss_pred -hccCCCCCCC---C---Cc--cccCCCCC--------Ccc--------------------------------c------
Q 044624 150 -WVDLPHRNTD---S---DE--FLLLDFPE--------AST--------------------------------I------ 174 (358)
Q Consensus 150 -~~~~p~~~~~---~---~~--~~~p~~~~--------~~~--------------------------------~------ 174 (358)
..+.|..... . +. ..+|+++. .+. +
T Consensus 164 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~nt~~~le~~~~~ 243 (482)
T 2pq6_A 164 ERGIIPFKDESYLTNGCLETKVDWIPGLKNFRLKDIVDFIRTTNPNDIMLEFFIEVADRVNKDTTILLNTFNELESDVIN 243 (482)
T ss_dssp HTTCSSCSSGGGGTSSGGGCBCCSSTTCCSCBGGGSCGGGCCSCTTCHHHHHHHHHHHTCCTTCCEEESSCGGGGHHHHH
T ss_pred hcCCCCCccccccccccccCccccCCCCCCCchHHCchhhccCCcccHHHHHHHHHHHhhccCCEEEEcChHHHhHHHHH
Confidence 1122221100 0 00 01122110 000 0
Q ss_pred --Cccccc---CCCCCCC--CC----------CC-CCChhHHHHHhhcCCCCceEEEEeccCCCCCHHHHHHHHHHHHhC
Q 044624 175 --HPVLRF---TGSKAGA--GK----------EH-GISAELCKNWLDRKPCRSVLYVSFGSQDTIAVSQMVQLAMALEAS 236 (358)
Q Consensus 175 --~p~~~~---~~~~~~~--~~----------~~-~~~~~~~~~wld~~~~~~vvyvs~GS~~~~~~~~~~~~~~al~~~ 236 (358)
++..+. +|+.... .. .. ...+.+|.+|||+++++++|||||||+...+.+++.+++++|+.+
T Consensus 244 ~~~~~~~~v~~VGPl~~~~~~~~~~~~~~~~~~~l~~~~~~~~~wld~~~~~~vv~vs~GS~~~~~~~~~~~~~~~l~~~ 323 (482)
T 2pq6_A 244 ALSSTIPSIYPIGPLPSLLKQTPQIHQLDSLDSNLWKEDTECLDWLESKEPGSVVYVNFGSTTVMTPEQLLEFAWGLANC 323 (482)
T ss_dssp HHHTTCTTEEECCCHHHHHHTSTTGGGGCC---------CHHHHHHTTSCTTCEEEEECCSSSCCCHHHHHHHHHHHHHT
T ss_pred HHHHhCCcEEEEcCCcccccccccccccccccccccccchHHHHHHhcCCCCceEEEecCCcccCCHHHHHHHHHHHHhc
Confidence 011111 1332110 00 00 123446999999988889999999999888889999999999999
Q ss_pred CCcEEEEecCCC--C----CCC-------CCCCCcccc-----------------cCCcchhhhhhcCcceEeccccccc
Q 044624 237 GKNFIWIVRPPI--G----FDI-------NSEFRANDA-----------------DGTQSALEALSHGVPINGWPLAAEQ 286 (358)
Q Consensus 237 ~~~~lw~~~~~~--~----~~~-------~~~~~~~wl-----------------gG~~s~~eal~~GvP~l~~P~~~DQ 286 (358)
+++|||+++.+. + +.. ....+.+|+ |||||++||+++|||||++|+++||
T Consensus 324 ~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~~~pq~~~L~h~~~~~~vth~G~~s~~Eal~~GvP~i~~P~~~dQ 403 (482)
T 2pq6_A 324 KKSFLWIIRPDLVIGGSVIFSSEFTNEIADRGLIASWCPQDKVLNHPSIGGFLTHCGWNSTTESICAGVPMLCWPFFADQ 403 (482)
T ss_dssp TCEEEEECCGGGSTTTGGGSCHHHHHHHTTTEEEESCCCHHHHHTSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTH
T ss_pred CCcEEEEEcCCccccccccCcHhHHHhcCCCEEEEeecCHHHHhcCCCCCEEEecCCcchHHHHHHcCCCEEecCcccch
Confidence 999999997531 1 110 112233564 9999999999999999999999999
Q ss_pred hhhhhhhhccccceEEecccCCccccHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHhhcc-CccccCC
Q 044624 287 FYNSNLLGEEVGVCAEVARGMNCAVLKEHIVVKIELVMNETEKGKPMRMKDLEVKEIIDNAFRN-DENLRDL 357 (358)
Q Consensus 287 ~~na~~v~~~~G~G~~l~~~~~~~~~~~~l~~ai~~ll~~~~~~~~~r~~a~~l~~~~~~a~~~-gss~~~~ 357 (358)
+.||+++++.+|+|+.++. .+++++|+++|+++|+|+ ++++||+||+++++++++|+++ |||++|+
T Consensus 404 ~~na~~~~~~~G~g~~l~~----~~~~~~l~~~i~~ll~~~-~~~~~r~~a~~l~~~~~~a~~~gGss~~~l 470 (482)
T 2pq6_A 404 PTDCRFICNEWEIGMEIDT----NVKREELAKLINEVIAGD-KGKKMKQKAMELKKKAEENTRPGGCSYMNL 470 (482)
T ss_dssp HHHHHHHHHTSCCEEECCS----SCCHHHHHHHHHHHHTSH-HHHHHHHHHHHHHHHHHHHTSTTCHHHHHH
T ss_pred HHHHHHHHHHhCEEEEECC----CCCHHHHHHHHHHHHcCC-cHHHHHHHHHHHHHHHHHHHhcCCcHHHHH
Confidence 9999999855599999973 699999999999999988 5667999999999999999999 9998764
No 4
>2c1x_A UDP-glucose flavonoid 3-O glycosyltransferase; WINE, catalysis, glycosylation; HET: UDP B3P; 1.9A {Vitis vinifera} SCOP: c.87.1.10 PDB: 2c1z_A* 2c9z_A*
Probab=100.00 E-value=5e-49 Score=375.88 Aligned_cols=342 Identities=19% Similarity=0.268 Sum_probs=231.6
Q ss_pred CcccCCCcChHHHHHHHHHHHhCCCcE--EEEEeCCcchhhhhhcCCC--CCCeEEEeccCCccCCCCCCCCCCCCCCCc
Q 044624 1 MLPFMAQGHVIPFLALAHHLESTKNYT--IAFVNTHLNIKKIKSSLPQ--SSPIHFLETPFNIIDHDLPPCTENTDSHPF 76 (358)
Q Consensus 1 ~~~~p~~GH~~P~l~La~~L~~~rGh~--Vt~~t~~~~~~~~~~~~~~--~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~ 76 (358)
++|+|++||++||++||++|++ |||+ |||++++.....+.+...+ ..+++|+.++ +++++..+.. ....
T Consensus 12 ~~p~p~~GHi~P~l~la~~L~~-rGh~v~vt~~~t~~~~~~~~~~~~~~~~~~i~~~~i~-----~glp~~~~~~-~~~~ 84 (456)
T 2c1x_A 12 VLAFPFSTHAAPLLAVVRRLAA-AAPHAVFSFFSTSQSNASIFHDSMHTMQCNIKSYDIS-----DGVPEGYVFA-GRPQ 84 (456)
T ss_dssp EECCCSSSSHHHHHHHHHHHHH-HCTTSEEEEEECHHHHHHHC-------CTTEEEEECC-----CCCCTTCCCC-CCTT
T ss_pred EEcCcccchHHHHHHHHHHHHh-CCCCeEEEEEeCchhHHHhhccccccCCCceEEEeCC-----CCCCCccccc-CChH
Confidence 5899999999999999999999 8655 5889887555443321110 1578998776 4555443211 1122
Q ss_pred hHHHHHHHHHhhchHHHHHHHHHHhhhcCCCCCcEEEECCCCccHHHHHHHhCCceEEEcchhHHHHHHHhhhh------
Q 044624 77 DVVRKLLEATLSFKPHFKKLIIDLIDEQNGHKPLCIITDMFFGWCKEIAQEYGIFHAIFIEGGGFGFACYYSLW------ 150 (358)
Q Consensus 77 ~~~~~~~~~~~~~~~~l~~ll~~~~~~~~~~~pd~vV~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~------ 150 (358)
.....+. ..+.+.++++++++.+.... +|||||+|.++.|+..+|+++|||++.++++++..+..+.+..
T Consensus 85 ~~~~~~~---~~~~~~~~~~l~~l~~~~~~-~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~ 160 (456)
T 2c1x_A 85 EDIELFT---RAAPESFRQGMVMAVAETGR-PVSCLVADAFIWFAADMAAEMGVAWLPFWTAGPNSLSTHVYIDEIREKI 160 (456)
T ss_dssp HHHHHHH---HHHHHHHHHHHHHHHHHHTC-CCCEEEEETTSTTHHHHHHHHTCEEEEEECSCHHHHHHHHTHHHHHHHH
T ss_pred HHHHHHH---HHhHHHHHHHHHHHHhccCC-CceEEEECCchHhHHHHHHHhCCCEEEEeCccHHHHHHHhhhHHHHhcc
Confidence 2222222 22234455555543221112 7999999999999999999999999999998876554432211
Q ss_pred ccCCCCCCCCCc-cccCCCCC--------Cc--------------------------------cc--------Ccccc--
Q 044624 151 VDLPHRNTDSDE-FLLLDFPE--------AS--------------------------------TI--------HPVLR-- 179 (358)
Q Consensus 151 ~~~p~~~~~~~~-~~~p~~~~--------~~--------------------------------~~--------~p~~~-- 179 (358)
...+........ ..+|+++. .+ .+ ++..+
T Consensus 161 ~~~~~~~~~~~~~~~~pg~~~~~~~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~ns~~~le~~~~~~~~~~~~~~ 240 (456)
T 2c1x_A 161 GVSGIQGREDELLNFIPGMSKVRFRDLQEGIVFGNLNSLFSRMLHRMGQVLPKATAVFINSFEELDDSLTNDLKSKLKTY 240 (456)
T ss_dssp CSSCCTTCTTCBCTTSTTCTTCBGGGSCTTTSSSCTTSHHHHHHHHHHHHGGGSSCEEESSCGGGCHHHHHHHHHHSSCE
T ss_pred CCcccccccccccccCCCCCcccHHhCchhhcCCCcccHHHHHHHHHHHhhhhCCEEEECChHHHhHHHHHHHHhcCCCE
Confidence 000000000000 01222211 00 00 01111
Q ss_pred -cCCCCCCCCCCC-CCChhHHHHHhhcCCCCceEEEEeccCCCCCHHHHHHHHHHHHhCCCcEEEEecCCCC--CCC---
Q 044624 180 -FTGSKAGAGKEH-GISAELCKNWLDRKPCRSVLYVSFGSQDTIAVSQMVQLAMALEASGKNFIWIVRPPIG--FDI--- 252 (358)
Q Consensus 180 -~~~~~~~~~~~~-~~~~~~~~~wld~~~~~~vvyvs~GS~~~~~~~~~~~~~~al~~~~~~~lw~~~~~~~--~~~--- 252 (358)
.+|+........ ...+.+|.+|||.++++++|||||||....+.+++.+++++|+.++++|||+++.... +..
T Consensus 241 ~~vGpl~~~~~~~~~~~~~~~~~wl~~~~~~~vv~vs~GS~~~~~~~~~~~~~~~l~~~~~~~lw~~~~~~~~~l~~~~~ 320 (456)
T 2c1x_A 241 LNIGPFNLITPPPVVPNTTGCLQWLKERKPTSVVYISFGTVTTPPPAEVVALSEALEASRVPFIWSLRDKARVHLPEGFL 320 (456)
T ss_dssp EECCCHHHHC---------CHHHHHHTSCTTCEEEEECCSSCCCCHHHHHHHHHHHHHHTCCEEEECCGGGGGGSCTTHH
T ss_pred EEecCcccCcccccccchhhHHHHHhcCCCcceEEEecCccccCCHHHHHHHHHHHHhcCCeEEEEECCcchhhCCHHHH
Confidence 113221000000 1223469999999888899999999999888899999999999999999999986421 111
Q ss_pred ----CCCCCcccc-----------------cCCcchhhhhhcCcceEeccccccchhhhhhhhccccceEEecccCCccc
Q 044624 253 ----NSEFRANDA-----------------DGTQSALEALSHGVPINGWPLAAEQFYNSNLLGEEVGVCAEVARGMNCAV 311 (358)
Q Consensus 253 ----~~~~~~~wl-----------------gG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~ 311 (358)
....+.+|+ |||||++||+++|||||++|+++||+.||+++++.||+|+.++. +.+
T Consensus 321 ~~~~~~~~v~~w~pq~~vL~h~~~~~fvth~G~~S~~Eal~~GvP~i~~P~~~dQ~~Na~~l~~~~g~g~~l~~---~~~ 397 (456)
T 2c1x_A 321 EKTRGYGMVVPWAPQAEVLAHEAVGAFVTHCGWNSLWESVAGGVPLICRPFFGDQRLNGRMVEDVLEIGVRIEG---GVF 397 (456)
T ss_dssp HHHTTTEEEESCCCHHHHHTSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTSCCEEECGG---GSC
T ss_pred hhcCCceEEecCCCHHHHhcCCcCCEEEecCCcchHHHHHHhCceEEecCChhhHHHHHHHHHHHhCeEEEecC---CCc
Confidence 112233554 99999999999999999999999999999999999999999976 679
Q ss_pred cHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHhhcc-CccccCC
Q 044624 312 LKEHIVVKIELVMNETEKGKPMRMKDLEVKEIIDNAFRN-DENLRDL 357 (358)
Q Consensus 312 ~~~~l~~ai~~ll~~~~~~~~~r~~a~~l~~~~~~a~~~-gss~~~~ 357 (358)
++++|+++|+++|+|+ ++++||+||+++++++++|+++ |||++||
T Consensus 398 ~~~~l~~~i~~ll~~~-~~~~~r~~a~~l~~~~~~a~~~gGsS~~~l 443 (456)
T 2c1x_A 398 TKSGLMSCFDQILSQE-KGKKLRENLRALRETADRAVGPKGSSTENF 443 (456)
T ss_dssp CHHHHHHHHHHHHHSH-HHHHHHHHHHHHHHHHHHHTSTTCHHHHHH
T ss_pred CHHHHHHHHHHHHCCC-cHHHHHHHHHHHHHHHHHhhhcCCcHHHHH
Confidence 9999999999999988 5778999999999999999999 9998874
No 5
>2acv_A Triterpene UDP-glucosyl transferase UGT71G1; glycosyltransferase; HET: UDP; 2.00A {Medicago truncatula} SCOP: c.87.1.10 PDB: 2acw_A*
Probab=100.00 E-value=9.2e-48 Score=367.99 Aligned_cols=337 Identities=25% Similarity=0.341 Sum_probs=236.8
Q ss_pred CcccCCCcChHHHHHHHHHHHhCC--CcEEEEEeCCcch-----hhhhhcCCCCCCeEEEeccCCccCCCCCCCCCCCCC
Q 044624 1 MLPFMAQGHVIPFLALAHHLESTK--NYTIAFVNTHLNI-----KKIKSSLPQSSPIHFLETPFNIIDHDLPPCTENTDS 73 (358)
Q Consensus 1 ~~~~p~~GH~~P~l~La~~L~~~r--Gh~Vt~~t~~~~~-----~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~ 73 (358)
++|+|++||++||++||++|++ | ||+|||++++.+. +.+.+......+++|+.+|.. .++. .+....
T Consensus 14 ~~p~p~~GHi~P~l~La~~L~~-r~pG~~Vt~v~t~~~~~~~~~~~~~~~~~~~~~i~~~~lp~~----~~~~-~~~~~~ 87 (463)
T 2acv_A 14 FIPAPGIGHLASALEFAKLLTN-HDKNLYITVFCIKFPGMPFADSYIKSVLASQPQIQLIDLPEV----EPPP-QELLKS 87 (463)
T ss_dssp EECCSSTTTHHHHHHHHHHHHH-TCTTEEEEEEECCCTTCCCCHHHHHHHHCSCTTEEEEECCCC----CCCC-GGGGGS
T ss_pred EEcCcccchHHHHHHHHHHHHh-cCCCcEEEEEEcCCcchhhhhhhhhhcccCCCCceEEECCCC----CCCc-ccccCC
Confidence 5899999999999999999999 9 9999999998753 222221001158999988732 1221 110011
Q ss_pred CCchHHHHHHHHHhhchHHHHHHHHHHhhhcCCCCCcEEEECCCCccHHHHHHHhCCceEEEcchhHHHHHHHhhhhccC
Q 044624 74 HPFDVVRKLLEATLSFKPHFKKLIIDLIDEQNGHKPLCIITDMFFGWCKEIAQEYGIFHAIFIEGGGFGFACYYSLWVDL 153 (358)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~~~~~~pd~vV~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~ 153 (358)
.... +...+..+.+.+++++++.. .. +|||||+|.++.|+..+|+++|||++.++++++..+..+.+.+...
T Consensus 88 ---~~~~-~~~~~~~~~~~~~~ll~~~~---~~-~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~~~ 159 (463)
T 2acv_A 88 ---PEFY-ILTFLESLIPHVKATIKTIL---SN-KVVGLVLDFFCVSMIDVGNEFGIPSYLFLTSNVGFLSLMLSLKNRQ 159 (463)
T ss_dssp ---HHHH-HHHHHHHTHHHHHHHHHHHC---CT-TEEEEEEEGGGGGGHHHHHHTTCCEEEEESSCHHHHHHHHHGGGSC
T ss_pred ---ccHH-HHHHHHhhhHHHHHHHHhcc---CC-CCeEEEECCcchhHHHHHHHcCCCEEEEeCchHHHHHHHHHHHhhc
Confidence 1111 33444566778888888741 11 7999999999999999999999999999999887765554332211
Q ss_pred ---CCCCCCCC---ccccCCC-CCC--------c-----------------c---------c-----------------C
Q 044624 154 ---PHRNTDSD---EFLLLDF-PEA--------S-----------------T---------I-----------------H 175 (358)
Q Consensus 154 ---p~~~~~~~---~~~~p~~-~~~--------~-----------------~---------~-----------------~ 175 (358)
+... ... ...+|++ ++. + . + .
T Consensus 160 ~~~~~~~-~~~~~~~~~~pg~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~nt~~ele~~~~~~l~~~~~p~ 238 (463)
T 2acv_A 160 IEEVFDD-SDRDHQLLNIPGISNQVPSNVLPDACFNKDGGYIAYYKLAERFRDTKGIIVNTFSDLEQSSIDALYDHDEKI 238 (463)
T ss_dssp TTCCCCC-SSGGGCEECCTTCSSCEEGGGSCHHHHCTTTHHHHHHHHHHHHTTSSEEEESCCHHHHHHHHHHHHHHCTTS
T ss_pred ccCCCCC-ccccCceeECCCCCCCCChHHCchhhcCCchHHHHHHHHHHhcccCCEEEECCHHHHhHHHHHHHHhccccC
Confidence 0000 000 1122333 110 0 0 0 0
Q ss_pred -cccccCCCCCCCCC-CC-C---CChhHHHHHhhcCCCCceEEEEeccCC-CCCHHHHHHHHHHHHhCCCcEEEEecCC-
Q 044624 176 -PVLRFTGSKAGAGK-EH-G---ISAELCKNWLDRKPCRSVLYVSFGSQD-TIAVSQMVQLAMALEASGKNFIWIVRPP- 247 (358)
Q Consensus 176 -p~~~~~~~~~~~~~-~~-~---~~~~~~~~wld~~~~~~vvyvs~GS~~-~~~~~~~~~~~~al~~~~~~~lw~~~~~- 247 (358)
++.+ +|+...... .. . ..+.+|.+|||.++++++|||||||+. ..+.+++.+++++|+.++++|||+++..
T Consensus 239 ~~v~~-vGpl~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~vv~vs~GS~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~ 317 (463)
T 2acv_A 239 PPIYA-VGPLLDLKGQPNPKLDQAQHDLILKWLDEQPDKSVVFLCFGSMGVSFGPSQIREIALGLKHSGVRFLWSNSAEK 317 (463)
T ss_dssp CCEEE-CCCCCCSSCCCBTTBCHHHHHHHHHHHHTSCTTCEEEEECCSSCCCCCHHHHHHHHHHHHHHTCEEEEECCCCG
T ss_pred CcEEE-eCCCcccccccccccccccchhHHHHHhcCCCCceEEEEeccccccCCHHHHHHHHHHHHhCCCcEEEEECCCc
Confidence 0111 143321110 00 1 234679999999888899999999999 8888899999999999999999999864
Q ss_pred ----CCCC-----CCCCCCcccc-----------------cCCcchhhhhhcCcceEeccccccchhhhhhhhccccceE
Q 044624 248 ----IGFD-----INSEFRANDA-----------------DGTQSALEALSHGVPINGWPLAAEQFYNSNLLGEEVGVCA 301 (358)
Q Consensus 248 ----~~~~-----~~~~~~~~wl-----------------gG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~ 301 (358)
.++. .....+.+|+ |||||++||+++|||||++|+++||+.||+++++.+|+|+
T Consensus 318 ~~l~~~~~~~~~~~~~~~v~~w~pq~~vL~h~~~~~fvth~G~~s~~Eal~~GvP~i~~P~~~dQ~~Na~~lv~~~g~g~ 397 (463)
T 2acv_A 318 KVFPEGFLEWMELEGKGMICGWAPQVEVLAHKAIGGFVSHCGWNSILESMWFGVPILTWPIYAEQQLNAFRLVKEWGVGL 397 (463)
T ss_dssp GGSCTTHHHHHHHHCSEEEESSCCHHHHHHSTTEEEEEECCCHHHHHHHHHTTCCEEECCCSTTHHHHHHHHHHTSCCEE
T ss_pred ccCChhHHHhhccCCCEEEEccCCHHHHhCCCccCeEEecCCchhHHHHHHcCCCeeeccchhhhHHHHHHHHHHcCeEE
Confidence 1111 1112233564 9999999999999999999999999999999754559999
Q ss_pred Ee-cccCCc--cccHHHHHHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHhhcc-CccccCC
Q 044624 302 EV-ARGMNC--AVLKEHIVVKIELVMN-ETEKGKPMRMKDLEVKEIIDNAFRN-DENLRDL 357 (358)
Q Consensus 302 ~l-~~~~~~--~~~~~~l~~ai~~ll~-~~~~~~~~r~~a~~l~~~~~~a~~~-gss~~~~ 357 (358)
.+ +..+.+ .+++++|+++|+++|+ ++ +||+||+++++++++|+++ |||++||
T Consensus 398 ~l~~~~~~~~~~~~~~~l~~ai~~ll~~~~----~~r~~a~~l~~~~~~a~~~gGss~~~l 454 (463)
T 2acv_A 398 GLRVDYRKGSDVVAAEEIEKGLKDLMDKDS----IVHKKVQEMKEMSRNAVVDGGSSLISV 454 (463)
T ss_dssp ESCSSCCTTCCCCCHHHHHHHHHHHTCTTC----THHHHHHHHHHHHHHHTSTTSHHHHHH
T ss_pred EEecccCCCCccccHHHHHHHHHHHHhccH----HHHHHHHHHHHHHHHHHhcCCcHHHHH
Confidence 99 321124 6899999999999997 46 8999999999999999999 9998875
No 6
>4amg_A Snogd; transferase, polyketide biosynthesis, GT1 family, nogalamyci; HET: MLY; 2.59A {Streptomyces nogalater} PDB: 4an4_A* 4amb_A*
Probab=100.00 E-value=8.4e-40 Score=307.65 Aligned_cols=321 Identities=13% Similarity=0.094 Sum_probs=195.8
Q ss_pred CcccCCCcChHHHHHHHHHHHhCCCcEEEEEeCCcchhhhhhcCCCCCCeEEEeccCCccCCC--CCCCCCCCC-----C
Q 044624 1 MLPFMAQGHVIPFLALAHHLESTKNYTIAFVNTHLNIKKIKSSLPQSSPIHFLETPFNIIDHD--LPPCTENTD-----S 73 (358)
Q Consensus 1 ~~~~p~~GH~~P~l~La~~L~~~rGh~Vt~~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~--~~~~~~~~~-----~ 73 (358)
|+++|++||++|+++||++|++ |||+|||+|++.+....+ .++.+..+........ .+....... .
T Consensus 27 ~~~~p~~GHv~P~l~LA~~L~~-rGh~Vt~~t~~~~~~~~~------~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (400)
T 4amg_A 27 FITSPGLSHILPTVPLAQALRA-LGHEVRYATGGDIRAVAE------AGLCAVDVSPGVNYAKLFVPDDTDVTDPMHSEG 99 (400)
T ss_dssp EECCSSHHHHGGGHHHHHHHHH-TTCEEEEEECSSTHHHHT------TTCEEEESSTTCCSHHHHSCCC-----------
T ss_pred EECCCchhHHHHHHHHHHHHHH-CCCEEEEEeCcchhhHHh------cCCeeEecCCchhHhhhccccccccccccchhh
Confidence 4789999999999999999999 999999999988776443 5777776542110000 000000000 0
Q ss_pred CCchHHHHHHH-HHhhchHHHHHHHHHHhhhcCCCCCcEEEECCCCccHHHHHHHhCCceEEEcchhHHHHHHHhh----
Q 044624 74 HPFDVVRKLLE-ATLSFKPHFKKLIIDLIDEQNGHKPLCIITDMFFGWCKEIAQEYGIFHAIFIEGGGFGFACYYS---- 148 (358)
Q Consensus 74 ~~~~~~~~~~~-~~~~~~~~l~~ll~~~~~~~~~~~pd~vV~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~---- 148 (358)
........... ........+.++++++ +||+||+|.+.+++..+|+++|||++.+...+.........
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~-------~pD~Vv~d~~~~~~~~~A~~~gip~~~~~~~~~~~~~~~~~~~~~ 172 (400)
T 4amg_A 100 LGEGFFAEMFARVSAVAVDGALRTARSW-------RPDLVVHTPTQGAGPLTAAALQLPCVELPLGPADSEPGLGALIRR 172 (400)
T ss_dssp -CHHHHHHHHHHHHHHHHHHHHHHHHHH-------CCSEEEECTTCTHHHHHHHHTTCCEEECCSSTTTCCHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhc-------CCCEEEECcchHHHHHHHHHcCCCceeecccccccccchhhHHHH
Confidence 00011111111 1133445556667777 89999999999999999999999999986554221111110
Q ss_pred -hh---ccCCCCCCCCCccccCCCCCCcc-cCcccccCCCCCCCCCCCCCChhHHHHHhhcCCCCceEEEEeccCCCCCH
Q 044624 149 -LW---VDLPHRNTDSDEFLLLDFPEAST-IHPVLRFTGSKAGAGKEHGISAELCKNWLDRKPCRSVLYVSFGSQDTIAV 223 (358)
Q Consensus 149 -~~---~~~p~~~~~~~~~~~p~~~~~~~-~~p~~~~~~~~~~~~~~~~~~~~~~~~wld~~~~~~vvyvs~GS~~~~~~ 223 (358)
.. ..................+.... ..|.....................+.+|++..+++++|||||||+...+.
T Consensus 173 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~ 252 (400)
T 4amg_A 173 AMSKDYERHGVTGEPTGSVRLTTTPPSVEALLPEDRRSPGAWPMRYVPYNGGAVLPDWLPPAAGRRRIAVTLGSIDALSG 252 (400)
T ss_dssp HTHHHHHHTTCCCCCSCEEEEECCCHHHHHTSCGGGCCTTCEECCCCCCCCCEECCTTCSCCTTCCEEEECCCSCC--CC
T ss_pred HHHHHHHHhCCCcccccchhhcccCchhhccCcccccCCcccCcccccccccccCcccccccCCCcEEEEeCCcccccCc
Confidence 00 00000000000000000000000 00000000000000000111122334589888889999999999875443
Q ss_pred --HHHHHHHHHHHhCCCcEEEEecCCCC--CCCCCC--CCcccc---------------cCCcchhhhhhcCcceEeccc
Q 044624 224 --SQMVQLAMALEASGKNFIWIVRPPIG--FDINSE--FRANDA---------------DGTQSALEALSHGVPINGWPL 282 (358)
Q Consensus 224 --~~~~~~~~al~~~~~~~lw~~~~~~~--~~~~~~--~~~~wl---------------gG~~s~~eal~~GvP~l~~P~ 282 (358)
+++.+++++++..+.+++|..+.... ....++ .+.+|+ |||||++||+++|||+|++|+
T Consensus 253 ~~~~~~~~~~~l~~~~~~~v~~~~~~~~~~~~~~~~~v~~~~~~p~~~lL~~~~~~v~h~G~~s~~Eal~~GvP~v~~P~ 332 (400)
T 4amg_A 253 GIAKLAPLFSEVADVDAEFVLTLGGGDLALLGELPANVRVVEWIPLGALLETCDAIIHHGGSGTLLTALAAGVPQCVIPH 332 (400)
T ss_dssp SSSTTHHHHHHGGGSSSEEEEECCTTCCCCCCCCCTTEEEECCCCHHHHHTTCSEEEECCCHHHHHHHHHHTCCEEECCC
T ss_pred cHHHHHHHHHHhhccCceEEEEecCccccccccCCCCEEEEeecCHHHHhhhhhheeccCCccHHHHHHHhCCCEEEecC
Confidence 56788999999999999999876431 111111 223454 999999999999999999999
Q ss_pred cccchhhhhhhhccccceEEecccCCccccHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHh
Q 044624 283 AAEQFYNSNLLGEEVGVCAEVARGMNCAVLKEHIVVKIELVMNETEKGKPMRMKDLEVKEIIDNA 347 (358)
Q Consensus 283 ~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~l~~ai~~ll~~~~~~~~~r~~a~~l~~~~~~a 347 (358)
++||+.||+++++. |+|+.++. .+.+++ +|+++|+|+ +||+||+++++++++.
T Consensus 333 ~~dQ~~na~~v~~~-G~g~~l~~---~~~~~~----al~~lL~d~----~~r~~a~~l~~~~~~~ 385 (400)
T 4amg_A 333 GSYQDTNRDVLTGL-GIGFDAEA---GSLGAE----QCRRLLDDA----GLREAALRVRQEMSEM 385 (400)
T ss_dssp ---CHHHHHHHHHH-TSEEECCT---TTCSHH----HHHHHHHCH----HHHHHHHHHHHHHHTS
T ss_pred cccHHHHHHHHHHC-CCEEEcCC---CCchHH----HHHHHHcCH----HHHHHHHHHHHHHHcC
Confidence 99999999999987 99999986 556654 677889999 9999999999998763
No 7
>2iya_A OLEI, oleandomycin glycosyltransferase; carbohydrate, glycosylation, enzyme, macrolide; HET: UDP ZIO; 1.7A {Streptomyces antibioticus}
Probab=100.00 E-value=2.4e-36 Score=286.58 Aligned_cols=313 Identities=18% Similarity=0.172 Sum_probs=206.5
Q ss_pred CcccCCCcChHHHHHHHHHHHhCCCcEEEEEeCCcchhhhhhcCCCCCCeEEEeccCCccCCCCCCCCCCCCCCCch---
Q 044624 1 MLPFMAQGHVIPFLALAHHLESTKNYTIAFVNTHLNIKKIKSSLPQSSPIHFLETPFNIIDHDLPPCTENTDSHPFD--- 77 (358)
Q Consensus 1 ~~~~p~~GH~~P~l~La~~L~~~rGh~Vt~~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~--- 77 (358)
++++|++||++|++.||++|++ +||+|||++++.+.+.+++ .+++|+.++. +++............
T Consensus 17 ~~~~~~~GHv~p~l~la~~L~~-~Gh~V~~~~~~~~~~~~~~-----~g~~~~~~~~-----~~~~~~~~~~~~~~~~~~ 85 (424)
T 2iya_A 17 FFNIPGHGHVNPSLGIVQELVA-RGHRVSYAITDEFAAQVKA-----AGATPVVYDS-----ILPKESNPEESWPEDQES 85 (424)
T ss_dssp EECCSCHHHHHHHHHHHHHHHH-TTCEEEEEECGGGHHHHHH-----HTCEEEECCC-----CSCCTTCTTCCCCSSHHH
T ss_pred EEeCCCCcccchHHHHHHHHHH-CCCeEEEEeCHHHHHHHHh-----CCCEEEecCc-----cccccccchhhcchhHHH
Confidence 4689999999999999999999 9999999999988887777 6899987762 222211110001111
Q ss_pred HHHHHHHHHhhchHHHHHHHHHHhhhcCCCCCcEEEECCCCccHHHHHHHhCCceEEEcchhHHHHHHHhhh----hccC
Q 044624 78 VVRKLLEATLSFKPHFKKLIIDLIDEQNGHKPLCIITDMFFGWCKEIAQEYGIFHAIFIEGGGFGFACYYSL----WVDL 153 (358)
Q Consensus 78 ~~~~~~~~~~~~~~~l~~ll~~~~~~~~~~~pd~vV~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~----~~~~ 153 (358)
.+..+......+.+.+.+++++. +|||||+|.+.+|+..+|+++|||++.+++.+.........+ ..+.
T Consensus 86 ~~~~~~~~~~~~~~~l~~~l~~~-------~pD~VI~d~~~~~~~~~A~~lgIP~v~~~~~~~~~~~~~~~~~~~~~~~~ 158 (424)
T 2iya_A 86 AMGLFLDEAVRVLPQLEDAYADD-------RPDLIVYDIASWPAPVLGRKWDIPFVQLSPTFVAYEGFEEDVPAVQDPTA 158 (424)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTTS-------CCSEEEEETTCTHHHHHHHHHTCCEEEEESSCCCCTTHHHHSGGGSCCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHhcc-------CCCEEEEcCcccHHHHHHHhcCCCEEEEeccccccccccccccccccccc
Confidence 11111111223334455555444 899999999988999999999999999986553100000000 0000
Q ss_pred --------CC----------------------------CCCCCCc--c-ccC-----CCCCCcccC-----cccccCCCC
Q 044624 154 --------PH----------------------------RNTDSDE--F-LLL-----DFPEASTIH-----PVLRFTGSK 184 (358)
Q Consensus 154 --------p~----------------------------~~~~~~~--~-~~p-----~~~~~~~~~-----p~~~~~~~~ 184 (358)
|. .+...+. . ..+ ..+..+... +-+..+|+.
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~vGp~ 238 (424)
T 2iya_A 159 DRGEEAAAPAGTGDAEEGAEAEDGLVRFFTRLSAFLEEHGVDTPATEFLIAPNRCIVALPRTFQIKGDTVGDNYTFVGPT 238 (424)
T ss_dssp ---------------------HHHHHHHHHHHHHHHHHTTCCSCHHHHHHCCSSEEESSCTTTSTTGGGCCTTEEECCCC
T ss_pred ccccccccccccccchhhhccchhHHHHHHHHHHHHHHcCCCCCHHHhccCCCcEEEEcchhhCCCccCCCCCEEEeCCC
Confidence 00 0000000 0 000 000000000 000001111
Q ss_pred CCCCCCCCCChhHHHHHhhcCCCCceEEEEeccCCCCCHHHHHHHHHHHHhCCCcEEEEecCCCCC---CCCCC--CCcc
Q 044624 185 AGAGKEHGISAELCKNWLDRKPCRSVLYVSFGSQDTIAVSQMVQLAMALEASGKNFIWIVRPPIGF---DINSE--FRAN 259 (358)
Q Consensus 185 ~~~~~~~~~~~~~~~~wld~~~~~~vvyvs~GS~~~~~~~~~~~~~~al~~~~~~~lw~~~~~~~~---~~~~~--~~~~ 259 (358)
. .......+|++..+++++|||+|||......+.+.+++++++..+.+++|.++..... ...+. ...+
T Consensus 239 ~-------~~~~~~~~~~~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~al~~~~~~~~~~~g~~~~~~~~~~~~~~v~~~~ 311 (424)
T 2iya_A 239 Y-------GDRSHQGTWEGPGDGRPVLLIALGSAFTDHLDFYRTCLSAVDGLDWHVVLSVGRFVDPADLGEVPPNVEVHQ 311 (424)
T ss_dssp C-------CCCGGGCCCCCCCSSCCEEEEECCSSSCCCHHHHHHHHHHHTTCSSEEEEECCTTSCGGGGCSCCTTEEEES
T ss_pred C-------CCcccCCCCCccCCCCCEEEEEcCCCCcchHHHHHHHHHHHhcCCcEEEEEECCcCChHHhccCCCCeEEec
Confidence 0 0111234688766677899999999986667888999999998889999988753211 11111 1224
Q ss_pred cc---------------cCCcchhhhhhcCcceEeccccccchhhhhhhhccccceEEecccCCccccHHHHHHHHHHHh
Q 044624 260 DA---------------DGTQSALEALSHGVPINGWPLAAEQFYNSNLLGEEVGVCAEVARGMNCAVLKEHIVVKIELVM 324 (358)
Q Consensus 260 wl---------------gG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~l~~ai~~ll 324 (358)
|+ ||+||++||+++|||+|++|.+.||+.||+++++. |+|+.++. +.+++++|+++|+++|
T Consensus 312 ~~~~~~~l~~~d~~v~~~G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~~~-g~g~~~~~---~~~~~~~l~~~i~~ll 387 (424)
T 2iya_A 312 WVPQLDILTKASAFITHAGMGSTMEALSNAVPMVAVPQIAEQTMNAERIVEL-GLGRHIPR---DQVTAEKLREAVLAVA 387 (424)
T ss_dssp SCCHHHHHTTCSEEEECCCHHHHHHHHHTTCCEEECCCSHHHHHHHHHHHHT-TSEEECCG---GGCCHHHHHHHHHHHH
T ss_pred CCCHHHHHhhCCEEEECCchhHHHHHHHcCCCEEEecCccchHHHHHHHHHC-CCEEEcCc---CCCCHHHHHHHHHHHH
Confidence 43 99999999999999999999999999999999876 99999986 5789999999999999
Q ss_pred cCCCCCHHHHHHHHHHHHHHHH
Q 044624 325 NETEKGKPMRMKDLEVKEIIDN 346 (358)
Q Consensus 325 ~~~~~~~~~r~~a~~l~~~~~~ 346 (358)
+|+ +||++++++++.+++
T Consensus 388 ~~~----~~~~~~~~~~~~~~~ 405 (424)
T 2iya_A 388 SDP----GVAERLAAVRQEIRE 405 (424)
T ss_dssp HCH----HHHHHHHHHHHHHHT
T ss_pred cCH----HHHHHHHHHHHHHHh
Confidence 999 999999999988865
No 8
>1iir_A Glycosyltransferase GTFB; rossmann fold; 1.80A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=100.00 E-value=1.4e-33 Score=266.94 Aligned_cols=310 Identities=13% Similarity=0.080 Sum_probs=198.5
Q ss_pred CcccCCCcChHHHHHHHHHHHhCCCcEEEEEeCCcchhhhhhcCCCCCCeEEEeccCCccCCCCCCCCCCCCCCCchHHH
Q 044624 1 MLPFMAQGHVIPFLALAHHLESTKNYTIAFVNTHLNIKKIKSSLPQSSPIHFLETPFNIIDHDLPPCTENTDSHPFDVVR 80 (358)
Q Consensus 1 ~~~~p~~GH~~P~l~La~~L~~~rGh~Vt~~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 80 (358)
++++++.||++|+++||++|++ +||+|||++++.+.+.+.. .+++|+.++.. .......... ... .
T Consensus 5 ~~~~~~~GHv~P~l~la~~L~~-~Gh~V~~~~~~~~~~~v~~-----~g~~~~~i~~~-----~~~~~~~~~~-~~~--~ 70 (415)
T 1iir_A 5 LATCGSRGDTEPLVALAVRVRD-LGADVRMCAPPDCAERLAE-----VGVPHVPVGPS-----ARAPIQRAKP-LTA--E 70 (415)
T ss_dssp EECCSCHHHHHHHHHHHHHHHH-TTCEEEEEECGGGHHHHHH-----TTCCEEECCC------------CCSC-CCH--H
T ss_pred EEcCCCchhHHHHHHHHHHHHH-CCCeEEEEcCHHHHHHHHH-----cCCeeeeCCCC-----HHHHhhcccc-cch--H
Confidence 4688999999999999999999 9999999999987777776 78999987742 1111111111 111 1
Q ss_pred HHHHHHh-hchHHHHHHHHHHhhhcCCCCCcEEEECC-CCcc--HHHHHHHhCCceEEEcchhHHHHH------------
Q 044624 81 KLLEATL-SFKPHFKKLIIDLIDEQNGHKPLCIITDM-FFGW--CKEIAQEYGIFHAIFIEGGGFGFA------------ 144 (358)
Q Consensus 81 ~~~~~~~-~~~~~l~~ll~~~~~~~~~~~pd~vV~D~-~~~~--~~~~A~~lgiP~v~~~~~~~~~~~------------ 144 (358)
.+..... .....++++.+. .. +|||||+|. +..+ +..+|+++|||++.+++++.....
T Consensus 71 ~~~~~~~~~~~~~~~~l~~~-----~~-~pD~vi~d~~~~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~p~~~~~~~~ 144 (415)
T 1iir_A 71 DVRRFTTEAIATQFDEIPAA-----AE-GCAAVVTTGLLAAAIGVRSVAEKLGIPYFYAFHCPSYVPSPYYPPPPLGEPS 144 (415)
T ss_dssp HHHHHHHHHHHHHHHHHHHH-----TT-TCSEEEEESCHHHHHHHHHHHHHHTCCEEEEESSGGGSCCSSSCCCC-----
T ss_pred HHHHHHHHHHHHHHHHHHHH-----hc-CCCEEEECChhHhHhhHHHHHHHhCCCEEEEecCCCcCCCcccCCccCCccc
Confidence 1111111 112223333321 12 899999998 6677 889999999999998876521000
Q ss_pred ------HH------h------------hhhc-c-CCCCCCCCC----ccccCCCCCCccc--C---cccccCCCCCCCCC
Q 044624 145 ------CY------Y------------SLWV-D-LPHRNTDSD----EFLLLDFPEASTI--H---PVLRFTGSKAGAGK 189 (358)
Q Consensus 145 ------~~------~------------~~~~-~-~p~~~~~~~----~~~~p~~~~~~~~--~---p~~~~~~~~~~~~~ 189 (358)
.. . .... + .+......+ ...+-..+..+.. + ++... |+....
T Consensus 145 ~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~v-G~~~~~-- 221 (415)
T 1iir_A 145 TQDTIDIPAQWERNNQSAYQRYGGLLNSHRDAIGLPPVEDIFTFGYTDHPWVAADPVLAPLQPTDLDAVQT-GAWILP-- 221 (415)
T ss_dssp ----CHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCHHHHHHCSSCEECSCTTTSCCCCCSSCCEEC-CCCCCC--
T ss_pred cchHHHHHHHHHHHHHHHHHHhHHHHHHHHHHcCCCCCCccccccCCCCEEEeeChhhcCCCcccCCeEee-CCCccC--
Confidence 00 0 0000 0 000000000 0000000000100 0 11111 222111
Q ss_pred CCCCChhHHHHHhhcCCCCceEEEEeccCCCCCHHHHHHHHHHHHhCCCcEEEEecCCCC-CCCCCC--CCcccc-----
Q 044624 190 EHGISAELCKNWLDRKPCRSVLYVSFGSQDTIAVSQMVQLAMALEASGKNFIWIVRPPIG-FDINSE--FRANDA----- 261 (358)
Q Consensus 190 ~~~~~~~~~~~wld~~~~~~vvyvs~GS~~~~~~~~~~~~~~al~~~~~~~lw~~~~~~~-~~~~~~--~~~~wl----- 261 (358)
.....+.+|.+||+.. +++|||+|||+. ...+.++.++++|+.++.+++|+++.... ...... ...+|+
T Consensus 222 ~~~~~~~~~~~~l~~~--~~~v~v~~Gs~~-~~~~~~~~~~~al~~~~~~~v~~~g~~~~~~~~~~~~v~~~~~~~~~~~ 298 (415)
T 1iir_A 222 DERPLSPELAAFLDAG--PPPVYLGFGSLG-APADAVRVAIDAIRAHGRRVILSRGWADLVLPDDGADCFAIGEVNHQVL 298 (415)
T ss_dssp CCCCCCHHHHHHHHTS--SCCEEEECC----CCHHHHHHHHHHHHHTTCCEEECTTCTTCCCSSCGGGEEECSSCCHHHH
T ss_pred cccCCCHHHHHHHhhC--CCeEEEeCCCCC-CcHHHHHHHHHHHHHCCCeEEEEeCCCcccccCCCCCEEEeCcCChHHH
Confidence 1123467899999875 369999999997 56777788999999999999999875421 111111 122443
Q ss_pred ----------cCCcchhhhhhcCcceEeccccccchhhhhhhhccccceEEecccCCccccHHHHHHHHHHHhcCCCCCH
Q 044624 262 ----------DGTQSALEALSHGVPINGWPLAAEQFYNSNLLGEEVGVCAEVARGMNCAVLKEHIVVKIELVMNETEKGK 331 (358)
Q Consensus 262 ----------gG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~l~~ai~~ll~~~~~~~ 331 (358)
||+||++||+++|||+|++|+++||+.||+++++. |+|+.++. ..+++++|+++|+++ +|+
T Consensus 299 l~~~d~~v~~~G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~~~-g~g~~~~~---~~~~~~~l~~~i~~l-~~~---- 369 (415)
T 1iir_A 299 FGRVAAVIHHGGAGTTHVAARAGAPQILLPQMADQPYYAGRVAEL-GVGVAHDG---PIPTFDSLSAALATA-LTP---- 369 (415)
T ss_dssp GGGSSEEEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHH-TSEEECSS---SSCCHHHHHHHHHHH-TSH----
T ss_pred HhhCCEEEeCCChhHHHHHHHcCCCEEECCCCCccHHHHHHHHHC-CCcccCCc---CCCCHHHHHHHHHHH-cCH----
Confidence 99999999999999999999999999999999877 99999986 578999999999999 998
Q ss_pred HHHHHHHHHHHHHH
Q 044624 332 PMRMKDLEVKEIID 345 (358)
Q Consensus 332 ~~r~~a~~l~~~~~ 345 (358)
+|++++++++++++
T Consensus 370 ~~~~~~~~~~~~~~ 383 (415)
T 1iir_A 370 ETHARATAVAGTIR 383 (415)
T ss_dssp HHHHHHHHHHHHSC
T ss_pred HHHHHHHHHHHHHh
Confidence 99999999887764
No 9
>3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin, teicoplanin, ORF1, natural products, antibiotic; HET: UDP; 1.15A {Amycolatopsis orientalis} SCOP: c.87.1.5 PDB: 3h4i_A* 1pn3_A* 1pnv_A*
Probab=100.00 E-value=2.1e-32 Score=257.83 Aligned_cols=312 Identities=13% Similarity=0.076 Sum_probs=201.1
Q ss_pred CcccCCCcChHHHHHHHHHHHhCCCcEEEEEeCCcchhhhhhcCCCCCCeEEEeccCCccCCCCCCCCCCCCCCCchHHH
Q 044624 1 MLPFMAQGHVIPFLALAHHLESTKNYTIAFVNTHLNIKKIKSSLPQSSPIHFLETPFNIIDHDLPPCTENTDSHPFDVVR 80 (358)
Q Consensus 1 ~~~~p~~GH~~P~l~La~~L~~~rGh~Vt~~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 80 (358)
|++.++.||++|++.|+++|++ +||+|+|++++.+.+.++. .+++|..++.+.. .+ .... ... ......
T Consensus 5 i~~~gt~Ghv~p~~~La~~L~~-~Gh~V~v~~~~~~~~~v~~-----~g~~~~~l~~~~~--~~-~~~~-~~~-~~~~~~ 73 (404)
T 3h4t_A 5 ITGCGSRGDTEPLVALAARLRE-LGADARMCLPPDYVERCAE-----VGVPMVPVGRAVR--AG-AREP-GEL-PPGAAE 73 (404)
T ss_dssp EEEESSHHHHHHHHHHHHHHHH-TTCCEEEEECGGGHHHHHH-----TTCCEEECSSCSS--GG-GSCT-TCC-CTTCGG
T ss_pred EEeCCCCccHHHHHHHHHHHHH-CCCeEEEEeCHHHHHHHHH-----cCCceeecCCCHH--HH-hccc-cCC-HHHHHH
Confidence 3567899999999999999999 9999999999988888887 7899998764311 11 0000 000 000001
Q ss_pred HHHHHHhhchHHHHHHHHHHhhhcCCCCCcEEEECCCCccH---HHHHHHhCCceEEEcchhHHHHH-------------
Q 044624 81 KLLEATLSFKPHFKKLIIDLIDEQNGHKPLCIITDMFFGWC---KEIAQEYGIFHAIFIEGGGFGFA------------- 144 (358)
Q Consensus 81 ~~~~~~~~~~~~l~~ll~~~~~~~~~~~pd~vV~D~~~~~~---~~~A~~lgiP~v~~~~~~~~~~~------------- 144 (358)
.+... ....++++.+.. . +||+||+|.....+ ..+|+++|||++.+..++.....
T Consensus 74 ~~~~~---~~~~~~~l~~~~-----~-~pD~Vi~~~~~~~~~~a~~~A~~lgiP~v~~~~~p~~~~~~~~~~~~~~~~~~ 144 (404)
T 3h4t_A 74 VVTEV---VAEWFDKVPAAI-----E-GCDAVVTTGLLPAAVAVRSMAEKLGIPYRYTVLSPDHLPSEQSQAERDMYNQG 144 (404)
T ss_dssp GHHHH---HHHHHHHHHHHH-----T-TCSEEEEEECHHHHHHHHHHHHHHTCCEEEEESSGGGSGGGSCHHHHHHHHHH
T ss_pred HHHHH---HHHHHHHHHHHh-----c-CCCEEEECCchhhhhhhhhHHhhcCCCEEEEEcCCccCCChhHHHHHHHHHHH
Confidence 11111 112222222222 1 69999999776654 67899999999988766541000
Q ss_pred ------HHhh-hhc-c-C-CCCCCC----CCcc---ccCCCCCCcccCcccccCCCCCCCCCCCCCChhHHHHHhhcCCC
Q 044624 145 ------CYYS-LWV-D-L-PHRNTD----SDEF---LLLDFPEASTIHPVLRFTGSKAGAGKEHGISAELCKNWLDRKPC 207 (358)
Q Consensus 145 ------~~~~-~~~-~-~-p~~~~~----~~~~---~~p~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~wld~~~~ 207 (358)
...+ ... + . |..... .+.. ..+.+.+.....+-....|.... ......++++.+|++. .
T Consensus 145 ~~~~~~~~~~~~~~~lgl~~~~~~~~~~~~~~~l~~~~~~l~p~~~~~~~~~~~G~~~~--~~~~~~~~~l~~~l~~--~ 220 (404)
T 3h4t_A 145 ADRLFGDAVNSHRASIGLPPVEHLYDYGYTDQPWLAADPVLSPLRPTDLGTVQTGAWIL--PDQRPLSAELEGFLRA--G 220 (404)
T ss_dssp HHHHHHHHHHHHHHHTTCCCCCCHHHHHHCSSCEECSCTTTSCCCTTCCSCCBCCCCCC--CCCCCCCHHHHHHHHT--S
T ss_pred HHHHhHHHHHHHHHHcCCCCCcchhhccccCCeEEeeCcceeCCCCCCCCeEEeCcccc--CCCCCCCHHHHHHHhc--C
Confidence 0000 000 0 0 100000 0000 00000000000000111121111 1123456788899985 3
Q ss_pred CceEEEEeccCCCCCHHHHHHHHHHHHhCCCcEEEEecCCCC-CCCCCC--CCcccc---------------cCCcchhh
Q 044624 208 RSVLYVSFGSQDTIAVSQMVQLAMALEASGKNFIWIVRPPIG-FDINSE--FRANDA---------------DGTQSALE 269 (358)
Q Consensus 208 ~~vvyvs~GS~~~~~~~~~~~~~~al~~~~~~~lw~~~~~~~-~~~~~~--~~~~wl---------------gG~~s~~e 269 (358)
+++|||+|||+.. ..+.+..++++++..+.++||+.+.... ...... ...+|+ ||+||++|
T Consensus 221 ~~~Vlv~~Gs~~~-~~~~~~~~~~al~~~~~~vv~~~g~~~~~~~~~~~~v~~~~~~~~~~ll~~~d~~v~~gG~~t~~E 299 (404)
T 3h4t_A 221 SPPVYVGFGSGPA-PAEAARVAIEAVRAQGRRVVLSSGWAGLGRIDEGDDCLVVGEVNHQVLFGRVAAVVHHGGAGTTTA 299 (404)
T ss_dssp SCCEEECCTTSCC-CTTHHHHHHHHHHHTTCCEEEECTTTTCCCSSCCTTEEEESSCCHHHHGGGSSEEEECCCHHHHHH
T ss_pred CCeEEEECCCCCC-cHHHHHHHHHHHHhCCCEEEEEeCCcccccccCCCCEEEecCCCHHHHHhhCcEEEECCcHHHHHH
Confidence 5799999999987 6778899999999999999999875431 111111 122333 99999999
Q ss_pred hhhcCcceEeccccccchhhhhhhhccccceEEecccCCccccHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHH
Q 044624 270 ALSHGVPINGWPLAAEQFYNSNLLGEEVGVCAEVARGMNCAVLKEHIVVKIELVMNETEKGKPMRMKDLEVKEIIDN 346 (358)
Q Consensus 270 al~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~l~~ai~~ll~~~~~~~~~r~~a~~l~~~~~~ 346 (358)
|+++|||+|++|+++||+.||+++++. |+|+.++. ..+++++|.++|+++|+ + +|+++++++++.+++
T Consensus 300 al~~GvP~v~~p~~~dQ~~na~~~~~~-G~g~~l~~---~~~~~~~l~~ai~~ll~-~----~~~~~~~~~~~~~~~ 367 (404)
T 3h4t_A 300 VTRAGAPQVVVPQKADQPYYAGRVADL-GVGVAHDG---PTPTVESLSAALATALT-P----GIRARAAAVAGTIRT 367 (404)
T ss_dssp HHHHTCCEEECCCSTTHHHHHHHHHHH-TSEEECSS---SSCCHHHHHHHHHHHTS-H----HHHHHHHHHHTTCCC
T ss_pred HHHcCCCEEEcCCcccHHHHHHHHHHC-CCEeccCc---CCCCHHHHHHHHHHHhC-H----HHHHHHHHHHHHHhh
Confidence 999999999999999999999999988 99999986 67899999999999999 8 999999998876644
No 10
>1rrv_A Glycosyltransferase GTFD; GT-B, glycosyltransferase, rossmann fold, glycopeptide, VACO antibiotic, transferase-antibiotic complex; HET: OMZ GHP OMY 3FG TYD BGC; 2.00A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=100.00 E-value=9.7e-33 Score=261.14 Aligned_cols=312 Identities=12% Similarity=0.041 Sum_probs=198.9
Q ss_pred CcccCCCcChHHHHHHHHHHHhCCCcEEEEEeCCcchhhhhhcCCCCCCeEEEeccCCccCCCCCCCCCCCCCCCchHHH
Q 044624 1 MLPFMAQGHVIPFLALAHHLESTKNYTIAFVNTHLNIKKIKSSLPQSSPIHFLETPFNIIDHDLPPCTENTDSHPFDVVR 80 (358)
Q Consensus 1 ~~~~p~~GH~~P~l~La~~L~~~rGh~Vt~~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 80 (358)
++++++.||++|+++||++|++ +||+|||++++.+.+.++. .|++|+.++... .+.+.. . ... ... .
T Consensus 5 ~~~~~~~GH~~p~l~la~~L~~-~Gh~V~~~~~~~~~~~v~~-----~g~~~~~~~~~~-~~~~~~-~--~~~-~~~--~ 71 (416)
T 1rrv_A 5 LSVCGTRGDVEIGVALADRLKA-LGVQTRMCAPPAAEERLAE-----VGVPHVPVGLPQ-HMMLQE-G--MPP-PPP--E 71 (416)
T ss_dssp EEEESCHHHHHHHHHHHHHHHH-TTCEEEEEECGGGHHHHHH-----HTCCEEECSCCG-GGCCCT-T--SCC-CCH--H
T ss_pred EEecCCCccHHHHHHHHHHHHH-CCCeEEEEeCHHHHHHHHH-----cCCeeeecCCCH-HHHHhh-c--ccc-chh--H
Confidence 3588999999999999999999 9999999999887777777 689998776421 011111 0 001 111 0
Q ss_pred HHHHHHhhchHHHHHHHHHHhhhcCCCCCcEEEECCC-Ccc--HHHHHHHhCCceEEEcchhHHHHHHHhh---------
Q 044624 81 KLLEATLSFKPHFKKLIIDLIDEQNGHKPLCIITDMF-FGW--CKEIAQEYGIFHAIFIEGGGFGFACYYS--------- 148 (358)
Q Consensus 81 ~~~~~~~~~~~~l~~ll~~~~~~~~~~~pd~vV~D~~-~~~--~~~~A~~lgiP~v~~~~~~~~~~~~~~~--------- 148 (358)
.+..... ..+.++++.+.+. .. +||+||+|.+ .++ +..+|+++|||++.+++++......+.+
T Consensus 72 ~~~~~~~---~~~~~~~~~l~~~-~~-~pD~vi~d~~~~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~p~~~~~~~~~ 146 (416)
T 1rrv_A 72 EEQRLAA---MTVEMQFDAVPGA-AE-GCAAVVAVGDLAAATGVRSVAEKLGLPFFYSVPSPVYLASPHLPPAYDEPTTP 146 (416)
T ss_dssp HHHHHHH---HHHHHHHHHHHHH-TT-TCSEEEEEECHHHHHHHHHHHHHHTCCEEEEESSGGGSCCSSSCCCBCSCCCT
T ss_pred HHHHHHH---HHHHHHHHHHHHH-hc-CCCEEEEcCchHHHHHHHHHHHHcCCCEEEEeCCCCCCCCcccCCCCCCCCCc
Confidence 1111111 1112222322210 12 7999999974 556 7889999999999987664211000000
Q ss_pred --------------------------hhc-c-CCCCCC-----CCCccccCCCCCCccc-C---cccccCCCCCCCCCCC
Q 044624 149 --------------------------LWV-D-LPHRNT-----DSDEFLLLDFPEASTI-H---PVLRFTGSKAGAGKEH 191 (358)
Q Consensus 149 --------------------------~~~-~-~p~~~~-----~~~~~~~p~~~~~~~~-~---p~~~~~~~~~~~~~~~ 191 (358)
... + .+.... ..+ ..+-..+..+.. + ++... |+.... ..
T Consensus 147 ~r~~n~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~l~~~~~~l~~~~~~~~~~~v-G~~~~~--~~ 222 (416)
T 1rrv_A 147 GVTDIRVLWEERAARFADRYGPTLNRRRAEIGLPPVEDVFGYGHGE-RPLLAADPVLAPLQPDVDAVQT-GAWLLS--DE 222 (416)
T ss_dssp TCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCSCHHHHTTCS-SCEECSCTTTSCCCSSCCCEEC-CCCCCC--CC
T ss_pred hHHHHHHHHHHHHHHHHHHhHHHHHHHHHHcCCCCCCchhhhccCC-CeEEccCccccCCCCCCCeeeE-CCCccC--cc
Confidence 000 0 000000 000 000000000000 0 11111 222111 11
Q ss_pred CCChhHHHHHhhcCCCCceEEEEeccCCC-CCHHHHHHHHHHHHhCCCcEEEEecCCCC-CCCCCC--CCcccc------
Q 044624 192 GISAELCKNWLDRKPCRSVLYVSFGSQDT-IAVSQMVQLAMALEASGKNFIWIVRPPIG-FDINSE--FRANDA------ 261 (358)
Q Consensus 192 ~~~~~~~~~wld~~~~~~vvyvs~GS~~~-~~~~~~~~~~~al~~~~~~~lw~~~~~~~-~~~~~~--~~~~wl------ 261 (358)
...+.++.+||++. +++|||+|||... ...+.+.+++++|+.++.+++|+++.... ....+. ...+|+
T Consensus 223 ~~~~~~~~~~l~~~--~~~v~v~~Gs~~~~~~~~~~~~~~~al~~~~~~~v~~~g~~~~~~~~~~~~v~~~~~~~~~~ll 300 (416)
T 1rrv_A 223 RPLPPELEAFLAAG--SPPVHIGFGSSSGRGIADAAKVAVEAIRAQGRRVILSRGWTELVLPDDRDDCFAIDEVNFQALF 300 (416)
T ss_dssp CCCCHHHHHHHHSS--SCCEEECCTTCCSHHHHHHHHHHHHHHHHTTCCEEEECTTTTCCCSCCCTTEEEESSCCHHHHG
T ss_pred CCCCHHHHHHHhcC--CCeEEEecCCCCccChHHHHHHHHHHHHHCCCeEEEEeCCccccccCCCCCEEEeccCChHHHh
Confidence 23467899999875 3699999999864 34566788999999999999999876421 111111 122443
Q ss_pred ---------cCCcchhhhhhcCcceEeccccccchhhhhhhhccccceEEecccCCccccHHHHHHHHHHHhcCCCCCHH
Q 044624 262 ---------DGTQSALEALSHGVPINGWPLAAEQFYNSNLLGEEVGVCAEVARGMNCAVLKEHIVVKIELVMNETEKGKP 332 (358)
Q Consensus 262 ---------gG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~l~~ai~~ll~~~~~~~~ 332 (358)
||+||++||+++|||+|++|++.||+.||+++++. |+|+.++. ...++++|+++|+++ +|+ +
T Consensus 301 ~~~d~~v~~~G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~~~-g~g~~~~~---~~~~~~~l~~~i~~l-~~~----~ 371 (416)
T 1rrv_A 301 RRVAAVIHHGSAGTEHVATRAGVPQLVIPRNTDQPYFAGRVAAL-GIGVAHDG---PTPTFESLSAALTTV-LAP----E 371 (416)
T ss_dssp GGSSEEEECCCHHHHHHHHHHTCCEEECCCSBTHHHHHHHHHHH-TSEEECSS---SCCCHHHHHHHHHHH-TSH----H
T ss_pred ccCCEEEecCChhHHHHHHHcCCCEEEccCCCCcHHHHHHHHHC-CCccCCCC---CCCCHHHHHHHHHHh-hCH----H
Confidence 99999999999999999999999999999999877 99999976 578999999999999 999 9
Q ss_pred HHHHHHHHHHHHH
Q 044624 333 MRMKDLEVKEIID 345 (358)
Q Consensus 333 ~r~~a~~l~~~~~ 345 (358)
|++++++++++++
T Consensus 372 ~~~~~~~~~~~~~ 384 (416)
T 1rrv_A 372 TRARAEAVAGMVL 384 (416)
T ss_dssp HHHHHHHHTTTCC
T ss_pred HHHHHHHHHHHHh
Confidence 9999998876554
No 11
>3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A*
Probab=100.00 E-value=5.2e-32 Score=255.84 Aligned_cols=312 Identities=12% Similarity=0.073 Sum_probs=205.3
Q ss_pred CcccCCCcChHHHHHHHHHHHhCCCcEEEEEeCCcchhhhhhcCCCCCCeEEEeccCCccCCCCCCCCC---CCCCCCch
Q 044624 1 MLPFMAQGHVIPFLALAHHLESTKNYTIAFVNTHLNIKKIKSSLPQSSPIHFLETPFNIIDHDLPPCTE---NTDSHPFD 77 (358)
Q Consensus 1 ~~~~p~~GH~~P~l~La~~L~~~rGh~Vt~~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~---~~~~~~~~ 77 (358)
|+++++.||++|++.||++|++ +||+|+|++++.+.+.++. .++++..++.+ ++.... ........
T Consensus 25 ~~~~~~~GHv~p~l~La~~L~~-~Gh~V~v~~~~~~~~~~~~-----~G~~~~~~~~~-----~~~~~~~~~~~~~~~~~ 93 (415)
T 3rsc_A 25 IVNVASHGLILPTLTVVTELVR-RGHRVSYVTAGGFAEPVRA-----AGATVVPYQSE-----IIDADAAEVFGSDDLGV 93 (415)
T ss_dssp EECCSCHHHHGGGHHHHHHHHH-TTCEEEEEECGGGHHHHHH-----TTCEEEECCCS-----TTTCCHHHHHHSSSSCH
T ss_pred EEeCCCccccccHHHHHHHHHH-CCCEEEEEeCHHHHHHHHh-----cCCEEEecccc-----ccccccchhhccccHHH
Confidence 4678999999999999999999 9999999999988888887 78999977632 111100 00001111
Q ss_pred HHHH-HHHHHhhchHHHHHHHHHHhhhcCCCCCcEEEEC-CCCccHHHHHHHhCCceEEEcchhHHH--------HHH--
Q 044624 78 VVRK-LLEATLSFKPHFKKLIIDLIDEQNGHKPLCIITD-MFFGWCKEIAQEYGIFHAIFIEGGGFG--------FAC-- 145 (358)
Q Consensus 78 ~~~~-~~~~~~~~~~~l~~ll~~~~~~~~~~~pd~vV~D-~~~~~~~~~A~~lgiP~v~~~~~~~~~--------~~~-- 145 (358)
.+.. +..........+.++++++ +||+||+| ...+++..+|+++|||++.+.+..... ...
T Consensus 94 ~~~~~~~~~~~~~~~~l~~~l~~~-------~PDlVi~d~~~~~~~~~aA~~~giP~v~~~~~~~~~~~~~~~~~~~~~~ 166 (415)
T 3rsc_A 94 RPHLMYLRENVSVLRATAEALDGD-------VPDLVLYDDFPFIAGQLLAARWRRPAVRLSAAFASNEHYSFSQDMVTLA 166 (415)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHSSS-------CCSEEEEESTTHHHHHHHHHHTTCCEEEEESSCCCCSSCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcc-------CCCEEEECchhhhHHHHHHHHhCCCEEEEEecccccCcccccccccccc
Confidence 1111 2222223344555555555 89999999 777888889999999999987432100 000
Q ss_pred -------------Hh-hh-hcc-CCCCC-----CCCCccccCCCCCCcccC-cc----cccCCCCCCCCCCCCCChhHHH
Q 044624 146 -------------YY-SL-WVD-LPHRN-----TDSDEFLLLDFPEASTIH-PV----LRFTGSKAGAGKEHGISAELCK 199 (358)
Q Consensus 146 -------------~~-~~-~~~-~p~~~-----~~~~~~~~p~~~~~~~~~-p~----~~~~~~~~~~~~~~~~~~~~~~ 199 (358)
.. .. ..+ .+... ...+. .+-.++..+.+. .. +...|+.. ....+..
T Consensus 167 ~~~~p~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~l~~~~~~~~~~~~~~~~~~~~vGp~~-------~~~~~~~ 238 (415)
T 3rsc_A 167 GTIDPLDLPVFRDTLRDLLAEHGLSRSVVDCWNHVEQL-NLVFVPKAFQIAGDTFDDRFVFVGPCF-------DDRRFLG 238 (415)
T ss_dssp TCCCGGGCHHHHHHHHHHHHHTTCCCCHHHHHTCCCSE-EEESSCTTTSTTGGGCCTTEEECCCCC-------CCCGGGC
T ss_pred ccCChhhHHHHHHHHHHHHHHcCCCCChhhhhcCCCCe-EEEEcCcccCCCcccCCCceEEeCCCC-------CCcccCc
Confidence 00 00 000 00000 00000 000111111100 00 00111111 1112233
Q ss_pred HHhhcCCCCceEEEEeccCCCCCHHHHHHHHHHHHhCCCcEEEEecCCCC---CCCCCCC--Ccccc-------------
Q 044624 200 NWLDRKPCRSVLYVSFGSQDTIAVSQMVQLAMALEASGKNFIWIVRPPIG---FDINSEF--RANDA------------- 261 (358)
Q Consensus 200 ~wld~~~~~~vvyvs~GS~~~~~~~~~~~~~~al~~~~~~~lw~~~~~~~---~~~~~~~--~~~wl------------- 261 (358)
+|+...+++++|||++||......+.+..++++++..+.+++|.++.... +...... ...|+
T Consensus 239 ~~~~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~al~~~~~~~v~~~g~~~~~~~l~~~~~~v~~~~~~~~~~ll~~ad~~v 318 (415)
T 3rsc_A 239 EWTRPADDLPVVLVSLGTTFNDRPGFFRDCARAFDGQPWHVVMTLGGQVDPAALGDLPPNVEAHRWVPHVKVLEQATVCV 318 (415)
T ss_dssp CCCCCSSCCCEEEEECTTTSCCCHHHHHHHHHHHTTSSCEEEEECTTTSCGGGGCCCCTTEEEESCCCHHHHHHHEEEEE
T ss_pred CccccCCCCCEEEEECCCCCCChHHHHHHHHHHHhcCCcEEEEEeCCCCChHHhcCCCCcEEEEecCCHHHHHhhCCEEE
Confidence 46655566789999999998777778899999999989999998876421 1111111 11332
Q ss_pred --cCCcchhhhhhcCcceEeccccccchhhhhhhhccccceEEecccCCccccHHHHHHHHHHHhcCCCCCHHHHHHHHH
Q 044624 262 --DGTQSALEALSHGVPINGWPLAAEQFYNSNLLGEEVGVCAEVARGMNCAVLKEHIVVKIELVMNETEKGKPMRMKDLE 339 (358)
Q Consensus 262 --gG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~l~~ai~~ll~~~~~~~~~r~~a~~ 339 (358)
||+||++||+++|+|+|++|...||+.||+++++. |+|+.+.. +.+++++|+++|+++|+|+ +|++++++
T Consensus 319 ~~~G~~t~~Ea~~~G~P~v~~p~~~~q~~~a~~l~~~-g~g~~~~~---~~~~~~~l~~~i~~ll~~~----~~~~~~~~ 390 (415)
T 3rsc_A 319 THGGMGTLMEALYWGRPLVVVPQSFDVQPMARRVDQL-GLGAVLPG---EKADGDTLLAAVGAVAADP----ALLARVEA 390 (415)
T ss_dssp ESCCHHHHHHHHHTTCCEEECCCSGGGHHHHHHHHHH-TCEEECCG---GGCCHHHHHHHHHHHHTCH----HHHHHHHH
T ss_pred ECCcHHHHHHHHHhCCCEEEeCCcchHHHHHHHHHHc-CCEEEccc---CCCCHHHHHHHHHHHHcCH----HHHHHHHH
Confidence 99999999999999999999999999999999988 99999986 6789999999999999999 99999999
Q ss_pred HHHHHHH
Q 044624 340 VKEIIDN 346 (358)
Q Consensus 340 l~~~~~~ 346 (358)
+++.+++
T Consensus 391 ~~~~~~~ 397 (415)
T 3rsc_A 391 MRGHVRR 397 (415)
T ss_dssp HHHHHHH
T ss_pred HHHHHHh
Confidence 9988765
No 12
>3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora}
Probab=99.98 E-value=1e-31 Score=252.41 Aligned_cols=315 Identities=16% Similarity=0.115 Sum_probs=202.7
Q ss_pred CcccCCCcChHHHHHHHHHHHhCCCcEEEEEeCCcchhhhhhcCCCCCCeEEEeccCCccCCCCCCCCCCCCCCCchHHH
Q 044624 1 MLPFMAQGHVIPFLALAHHLESTKNYTIAFVNTHLNIKKIKSSLPQSSPIHFLETPFNIIDHDLPPCTENTDSHPFDVVR 80 (358)
Q Consensus 1 ~~~~p~~GH~~P~l~La~~L~~~rGh~Vt~~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 80 (358)
++++++.||++|++.|+++|++ +||+|+|++++.+.+.++. .|++|..++.... ................+.
T Consensus 9 ~~~~~~~Ghv~~~~~La~~L~~-~GheV~v~~~~~~~~~~~~-----~G~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~ 80 (402)
T 3ia7_A 9 FANVQGHGHVYPSLGLVSELAR-RGHRITYVTTPLFADEVKA-----AGAEVVLYKSEFD--TFHVPEVVKQEDAETQLH 80 (402)
T ss_dssp EECCSSHHHHHHHHHHHHHHHH-TTCEEEEEECHHHHHHHHH-----TTCEEEECCCGGG--TSSSSSSSCCTTHHHHHH
T ss_pred EEeCCCCcccccHHHHHHHHHh-CCCEEEEEcCHHHHHHHHH-----cCCEEEecccccc--cccccccccccchHHHHH
Confidence 4678999999999999999999 9999999999888888877 7899997764211 000000001111111111
Q ss_pred H-HHHHHhhchHHHHHHHHHHhhhcCCCCCcEEEEC-CCCccHHHHHHHhCCceEEEcchhHHHH--------HH-----
Q 044624 81 K-LLEATLSFKPHFKKLIIDLIDEQNGHKPLCIITD-MFFGWCKEIAQEYGIFHAIFIEGGGFGF--------AC----- 145 (358)
Q Consensus 81 ~-~~~~~~~~~~~l~~ll~~~~~~~~~~~pd~vV~D-~~~~~~~~~A~~lgiP~v~~~~~~~~~~--------~~----- 145 (358)
. +..........+.++++++ +||+||+| .+.+++..+|+++|||++.+.+...... ..
T Consensus 81 ~~~~~~~~~~~~~l~~~l~~~-------~pD~Vi~d~~~~~~~~~aA~~~giP~v~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (402)
T 3ia7_A 81 LVYVRENVAILRAAEEALGDN-------PPDLVVYDVFPFIAGRLLAARWDRPAVRLTGGFAANEHYSLFKELWKSNGQR 153 (402)
T ss_dssp HHHHHHHHHHHHHHHHHHTTC-------CCSEEEEESTTHHHHHHHHHHHTCCEEEEESSCCCBTTBCHHHHHHHHHTCC
T ss_pred HHHHHHHHHHHHHHHHHHhcc-------CCCEEEECchHHHHHHHHHHhhCCCEEEEecccccCcccccccccccccccc
Confidence 1 1122223334455555554 89999999 7778888999999999999864321000 00
Q ss_pred --------HhhhhccCCCCCCCC----------CccccCCCCCCcccC-cc----cccCCCCCCCCCCCCCChhHHHHHh
Q 044624 146 --------YYSLWVDLPHRNTDS----------DEFLLLDFPEASTIH-PV----LRFTGSKAGAGKEHGISAELCKNWL 202 (358)
Q Consensus 146 --------~~~~~~~~p~~~~~~----------~~~~~p~~~~~~~~~-p~----~~~~~~~~~~~~~~~~~~~~~~~wl 202 (358)
...........+... +. .+-.++..+... .. +...|+.. .......+|+
T Consensus 154 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~l~~~~~~~~~~~~~~~~~~~~vGp~~-------~~~~~~~~~~ 225 (402)
T 3ia7_A 154 HPADVEAVHSVLVDLLGKYGVDTPVKEYWDEIEGL-TIVFLPKSFQPFAETFDERFAFVGPTL-------TGRDGQPGWQ 225 (402)
T ss_dssp CGGGSHHHHHHHHHHHHTTTCCSCHHHHHTCCCSC-EEESSCGGGSTTGGGCCTTEEECCCCC-------CC----CCCC
T ss_pred ChhhHHHHHHHHHHHHHHcCCCCChhhhhcCCCCe-EEEEcChHhCCccccCCCCeEEeCCCC-------CCcccCCCCc
Confidence 000000000000000 00 000111111100 00 00111111 1112233466
Q ss_pred hcCCCCceEEEEeccCCCCCHHHHHHHHHHHHhCCCcEEEEecCCCC---CCCCCCC--Ccccc---------------c
Q 044624 203 DRKPCRSVLYVSFGSQDTIAVSQMVQLAMALEASGKNFIWIVRPPIG---FDINSEF--RANDA---------------D 262 (358)
Q Consensus 203 d~~~~~~vvyvs~GS~~~~~~~~~~~~~~al~~~~~~~lw~~~~~~~---~~~~~~~--~~~wl---------------g 262 (358)
...+++++|||++||......+.+..++++++..+.+++|..+.... +...... ...|+ |
T Consensus 226 ~~~~~~~~v~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~v~~~~~~~~~~ll~~ad~~v~~~ 305 (402)
T 3ia7_A 226 PPRPDAPVLLVSLGNQFNEHPEFFRACAQAFADTPWHVVMAIGGFLDPAVLGPLPPNVEAHQWIPFHSVLAHARACLTHG 305 (402)
T ss_dssp CSSTTCCEEEEECCSCSSCCHHHHHHHHHHHTTSSCEEEEECCTTSCGGGGCSCCTTEEEESCCCHHHHHTTEEEEEECC
T ss_pred ccCCCCCEEEEECCCCCcchHHHHHHHHHHHhcCCcEEEEEeCCcCChhhhCCCCCcEEEecCCCHHHHHhhCCEEEECC
Confidence 55566789999999998777778899999999989999998876421 1111111 11222 9
Q ss_pred CCcchhhhhhcCcceEeccc-cccchhhhhhhhccccceEEecccCCccccHHHHHHHHHHHhcCCCCCHHHHHHHHHHH
Q 044624 263 GTQSALEALSHGVPINGWPL-AAEQFYNSNLLGEEVGVCAEVARGMNCAVLKEHIVVKIELVMNETEKGKPMRMKDLEVK 341 (358)
Q Consensus 263 G~~s~~eal~~GvP~l~~P~-~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~l~~ai~~ll~~~~~~~~~r~~a~~l~ 341 (358)
|+||++||+++|+|+|++|. ..||+.|+.++++. |+|+.+.. +.++++.|.++|+++|+|+ ++++++++++
T Consensus 306 G~~t~~Ea~~~G~P~v~~p~~~~~q~~~a~~~~~~-g~g~~~~~---~~~~~~~l~~~~~~ll~~~----~~~~~~~~~~ 377 (402)
T 3ia7_A 306 TTGAVLEAFAAGVPLVLVPHFATEAAPSAERVIEL-GLGSVLRP---DQLEPASIREAVERLAADS----AVRERVRRMQ 377 (402)
T ss_dssp CHHHHHHHHHTTCCEEECGGGCGGGHHHHHHHHHT-TSEEECCG---GGCSHHHHHHHHHHHHHCH----HHHHHHHHHH
T ss_pred CHHHHHHHHHhCCCEEEeCCCcccHHHHHHHHHHc-CCEEEccC---CCCCHHHHHHHHHHHHcCH----HHHHHHHHHH
Confidence 99999999999999999999 99999999999988 99999986 6789999999999999999 9999999998
Q ss_pred HHHHH
Q 044624 342 EIIDN 346 (358)
Q Consensus 342 ~~~~~ 346 (358)
+.+.+
T Consensus 378 ~~~~~ 382 (402)
T 3ia7_A 378 RDILS 382 (402)
T ss_dssp HHHHT
T ss_pred HHHhh
Confidence 88754
No 13
>2yjn_A ERYCIII, glycosyltransferase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea}
Probab=99.98 E-value=2e-32 Score=260.95 Aligned_cols=321 Identities=12% Similarity=0.111 Sum_probs=198.5
Q ss_pred CcccCCCcChHHHHHHHHHHHhCCCcEEEEEeCCcchhhhhhcCCCCCCeEEEeccCCccCCCCCCCC--CC------CC
Q 044624 1 MLPFMAQGHVIPFLALAHHLESTKNYTIAFVNTHLNIKKIKSSLPQSSPIHFLETPFNIIDHDLPPCT--EN------TD 72 (358)
Q Consensus 1 ~~~~p~~GH~~P~l~La~~L~~~rGh~Vt~~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~--~~------~~ 72 (358)
+++.++.||++|+++||++|++ +||+|+|++++.+.+.++. .|++|+.++...+.+++.... .. .+
T Consensus 25 ~~~~~~~GHv~p~l~la~~L~~-~GheV~~~~~~~~~~~v~~-----~G~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (441)
T 2yjn_A 25 FSSMASKSHLFGLVPLAWAFRA-AGHEVRVVASPALTEDITA-----AGLTAVPVGTDVDLVDFMTHAGHDIIDYVRSLD 98 (441)
T ss_dssp EECCSCHHHHTTTHHHHHHHHH-TTCEEEEEECGGGHHHHHT-----TTCCEEECSCCCCHHHHHHHTTHHHHHHHTTCC
T ss_pred EEcCCCcchHhHHHHHHHHHHH-CCCeEEEEeCchhHHHHHh-----CCCceeecCCccchHHHhhhhhccccccccccc
Confidence 3578899999999999999999 9999999999888777777 789999776421000000000 00 00
Q ss_pred -----CC--CchHHHHHHHHH----h-----h-chHHHHHHHHHHhhhcCCCCCcEEEECCCCccHHHHHHHhCCceEEE
Q 044624 73 -----SH--PFDVVRKLLEAT----L-----S-FKPHFKKLIIDLIDEQNGHKPLCIITDMFFGWCKEIAQEYGIFHAIF 135 (358)
Q Consensus 73 -----~~--~~~~~~~~~~~~----~-----~-~~~~l~~ll~~~~~~~~~~~pd~vV~D~~~~~~~~~A~~lgiP~v~~ 135 (358)
.. ....+....... . . ....+.++++++ +||+||+|.+++++..+|+++|||++.+
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-------~pDlVv~d~~~~~~~~aA~~lgiP~v~~ 171 (441)
T 2yjn_A 99 FSERDPATLTWEHLLGMQTVLTPTFYALMSPDTLIEGMVSFCRKW-------RPDLVIWEPLTFAAPIAAAVTGTPHARL 171 (441)
T ss_dssp CTTCCGGGGSHHHHHHHHHHHHHHTTTTSSCHHHHHHHHHHHHHH-------CCSEEEECTTCTHHHHHHHHHTCCEEEE
T ss_pred ccccCcchhhhhhhhhHHHHHHHHHHhhcchHHHHHHHHHHHHhc-------CCCEEEecCcchhHHHHHHHcCCCEEEE
Confidence 00 000111111111 1 1 233444555566 8999999998888899999999999998
Q ss_pred cchhHHHHHH---HhhhhccCCCC-----------------CC-CC------CccccCCCCCCcccCcccccCCCCCCCC
Q 044624 136 IEGGGFGFAC---YYSLWVDLPHR-----------------NT-DS------DEFLLLDFPEASTIHPVLRFTGSKAGAG 188 (358)
Q Consensus 136 ~~~~~~~~~~---~~~~~~~~p~~-----------------~~-~~------~~~~~p~~~~~~~~~p~~~~~~~~~~~~ 188 (358)
...+...... +.....+.+.. +. .. ....+..++..+....-.+.. +....
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~-~~~~~- 249 (441)
T 2yjn_A 172 LWGPDITTRARQNFLGLLPDQPEEHREDPLAEWLTWTLEKYGGPAFDEEVVVGQWTIDPAPAAIRLDTGLKTV-GMRYV- 249 (441)
T ss_dssp CSSCCHHHHHHHHHHHHGGGSCTTTCCCHHHHHHHHHHHHTTCCCCCGGGTSCSSEEECSCGGGSCCCCCCEE-ECCCC-
T ss_pred ecCCCcchhhhhhhhhhccccccccccchHHHHHHHHHHHcCCCCCCccccCCCeEEEecCccccCCCCCCCC-ceeee-
Confidence 6543221100 00000011100 00 00 000011111111100000000 00000
Q ss_pred CCCCCChhHHHHHhhcCCCCceEEEEeccCCCC---CHHHHHHHHHHHHhCCCcEEEEecCCCC--CCCCCC--CCcccc
Q 044624 189 KEHGISAELCKNWLDRKPCRSVLYVSFGSQDTI---AVSQMVQLAMALEASGKNFIWIVRPPIG--FDINSE--FRANDA 261 (358)
Q Consensus 189 ~~~~~~~~~~~~wld~~~~~~vvyvs~GS~~~~---~~~~~~~~~~al~~~~~~~lw~~~~~~~--~~~~~~--~~~~wl 261 (358)
....+.++.+|++..+++++|||++||+... ..+.+..++++++..+.+++|+.+.... +..... ...+|+
T Consensus 250 --~~~~~~~~~~~l~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~~~~al~~~~~~~v~~~g~~~~~~l~~~~~~v~~~~~~ 327 (441)
T 2yjn_A 250 --DYNGPSVVPEWLHDEPERRRVCLTLGISSRENSIGQVSIEELLGAVGDVDAEIIATFDAQQLEGVANIPDNVRTVGFV 327 (441)
T ss_dssp --CCCSSCCCCGGGSSCCSSCEEEEEC----------CCSTTTTHHHHHTSSSEEEECCCTTTTSSCSSCCSSEEECCSC
T ss_pred --CCCCCcccchHhhcCCCCCEEEEECCCCcccccChHHHHHHHHHHHHcCCCEEEEEECCcchhhhccCCCCEEEecCC
Confidence 0011234557998766778999999998753 3355678889999999999998875421 111111 122333
Q ss_pred ---------------cCCcchhhhhhcCcceEeccccccchhhhhhhhccccceEEecccCCccccHHHHHHHHHHHhcC
Q 044624 262 ---------------DGTQSALEALSHGVPINGWPLAAEQFYNSNLLGEEVGVCAEVARGMNCAVLKEHIVVKIELVMNE 326 (358)
Q Consensus 262 ---------------gG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~l~~ai~~ll~~ 326 (358)
||+||++||+++|||+|++|+..||+.||+++++. |+|+.++. +.+++++|+++|+++|+|
T Consensus 328 ~~~~ll~~ad~~V~~~G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~~~-g~g~~~~~---~~~~~~~l~~~i~~ll~~ 403 (441)
T 2yjn_A 328 PMHALLPTCAATVHHGGPGSWHTAAIHGVPQVILPDGWDTGVRAQRTQEF-GAGIALPV---PELTPDQLRESVKRVLDD 403 (441)
T ss_dssp CHHHHGGGCSEEEECCCHHHHHHHHHTTCCEEECCCSHHHHHHHHHHHHH-TSEEECCT---TTCCHHHHHHHHHHHHHC
T ss_pred CHHHHHhhCCEEEECCCHHHHHHHHHhCCCEEEeCCcccHHHHHHHHHHc-CCEEEccc---ccCCHHHHHHHHHHHhcC
Confidence 99999999999999999999999999999999988 99999986 678999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHH
Q 044624 327 TEKGKPMRMKDLEVKEIIDN 346 (358)
Q Consensus 327 ~~~~~~~r~~a~~l~~~~~~ 346 (358)
+ +|+++++++++.+++
T Consensus 404 ~----~~~~~~~~~~~~~~~ 419 (441)
T 2yjn_A 404 P----AHRAGAARMRDDMLA 419 (441)
T ss_dssp H----HHHHHHHHHHHHHHT
T ss_pred H----HHHHHHHHHHHHHHc
Confidence 9 999999999988764
No 14
>2p6p_A Glycosyl transferase; X-RAY-diffraction,urdamycina-biosynthesis; 1.88A {Streptomyces fradiae}
Probab=99.98 E-value=1.8e-31 Score=249.69 Aligned_cols=318 Identities=13% Similarity=0.031 Sum_probs=203.1
Q ss_pred CcccCCCcChHHHHHHHHHHHhCCCcEEEEEeCCcchhhhhhcCCCCCCeEEEeccCCccCCCCCCCCCCC-CCC-Cc-h
Q 044624 1 MLPFMAQGHVIPFLALAHHLESTKNYTIAFVNTHLNIKKIKSSLPQSSPIHFLETPFNIIDHDLPPCTENT-DSH-PF-D 77 (358)
Q Consensus 1 ~~~~p~~GH~~P~l~La~~L~~~rGh~Vt~~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~-~~~-~~-~ 77 (358)
+++.++.||++|++.|+++|++ +||+|+|++++...+.+.. .++++..++.......+....... ... .. .
T Consensus 5 ~~~~~~~Gh~~p~~~la~~L~~-~Gh~V~~~~~~~~~~~~~~-----~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (384)
T 2p6p_A 5 FVAAGSPATVFALAPLATAARN-AGHQVVMAANQDMGPVVTG-----VGLPAVATTDLPIRHFITTDREGRPEAIPSDPV 78 (384)
T ss_dssp EECCSSHHHHHHHHHHHHHHHH-TTCEEEEEECGGGHHHHHH-----TTCCEEESCSSCHHHHHHBCTTSCBCCCCCSHH
T ss_pred EEeCCccchHhHHHHHHHHHHH-CCCEEEEEeCHHHHHHHHh-----CCCEEEEeCCcchHHHHhhhcccCccccCcchH
Confidence 3578899999999999999999 9999999999877766666 788888766321000000000000 000 10 1
Q ss_pred HHHHH----HH-HHhhchHHHHHHHHHHhhhcCCCCCcEEEECCCCccHHHHHHHhCCceEEEcchhHH-----H-HHHH
Q 044624 78 VVRKL----LE-ATLSFKPHFKKLIIDLIDEQNGHKPLCIITDMFFGWCKEIAQEYGIFHAIFIEGGGF-----G-FACY 146 (358)
Q Consensus 78 ~~~~~----~~-~~~~~~~~l~~ll~~~~~~~~~~~pd~vV~D~~~~~~~~~A~~lgiP~v~~~~~~~~-----~-~~~~ 146 (358)
....+ .. ........+.+++++. +||+||+|.+.+++..+|+.+|||++.+...+.. . ....
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~-------~pD~Vi~~~~~~~~~~~a~~~giP~v~~~~~~~~~~~~~~~~~~~ 151 (384)
T 2p6p_A 79 AQARFTGRWFARMAASSLPRMLDFSRAW-------RPDLIVGGTMSYVAPLLALHLGVPHARQTWDAVDADGIHPGADAE 151 (384)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH-------CCSEEEEETTCTHHHHHHHHHTCCEEEECCSSCCCTTTHHHHHHH
T ss_pred HHHHHHHHHHHhhHHHHHHHHHHHHhcc-------CCcEEEECcchhhHHHHHHhcCCCEEEeccCCcccchhhHHHHHH
Confidence 11111 11 1122344555666666 8999999998888888999999999988754310 0 0000
Q ss_pred h-hh-hcc-CCCCCCCCCccccCCCCCCcccC-cccccCCCCCCCCCCCCCChhHHHHHhhcCCCCceEEEEeccCCCC-
Q 044624 147 Y-SL-WVD-LPHRNTDSDEFLLLDFPEASTIH-PVLRFTGSKAGAGKEHGISAELCKNWLDRKPCRSVLYVSFGSQDTI- 221 (358)
Q Consensus 147 ~-~~-~~~-~p~~~~~~~~~~~p~~~~~~~~~-p~~~~~~~~~~~~~~~~~~~~~~~~wld~~~~~~vvyvs~GS~~~~- 221 (358)
. .. ..+ .+... ..+. .+-..+..+... +. +.. +.... ....+.++.+|++..+++++|||++||....
T Consensus 152 ~~~~~~~~g~~~~~-~~~~-~l~~~~~~~~~~~~~-~~~-~~~~~---~~~~~~~~~~~l~~~~~~~~v~v~~Gs~~~~~ 224 (384)
T 2p6p_A 152 LRPELSELGLERLP-APDL-FIDICPPSLRPANAA-PAR-MMRHV---ATSRQCPLEPWMYTRDTRQRVLVTSGSRVAKE 224 (384)
T ss_dssp THHHHHHTTCSSCC-CCSE-EEECSCGGGSCTTSC-CCE-ECCCC---CCCCCCBCCHHHHCCCSSCEEEEECSSSSSCC
T ss_pred HHHHHHHcCCCCCC-CCCe-EEEECCHHHCCCCCC-CCC-ceEec---CCCCCCCCCchhhcCCCCCEEEEECCCCCccc
Confidence 0 00 000 01000 0000 010111101100 00 000 00000 0011234557988755678999999999764
Q ss_pred ----CHHHHHHHHHHHHhCCCcEEEEecCCC--CCC--CCCCCCcccc---------------cCCcchhhhhhcCcceE
Q 044624 222 ----AVSQMVQLAMALEASGKNFIWIVRPPI--GFD--INSEFRANDA---------------DGTQSALEALSHGVPIN 278 (358)
Q Consensus 222 ----~~~~~~~~~~al~~~~~~~lw~~~~~~--~~~--~~~~~~~~wl---------------gG~~s~~eal~~GvP~l 278 (358)
..+.+.+++++|+..+.+++|+.+... .+. ...... .|+ ||+||++||+++|+|+|
T Consensus 225 ~~~~~~~~~~~~~~al~~~~~~~~~~~g~~~~~~l~~~~~~v~~-~~~~~~~~l~~~d~~v~~~G~~t~~Ea~~~G~P~v 303 (384)
T 2p6p_A 225 SYDRNFDFLRGLAKDLVRWDVELIVAAPDTVAEALRAEVPQARV-GWTPLDVVAPTCDLLVHHAGGVSTLTGLSAGVPQL 303 (384)
T ss_dssp SSCCCCTTHHHHHHHHHTTTCEEEEECCHHHHHHHHHHCTTSEE-ECCCHHHHGGGCSEEEECSCTTHHHHHHHTTCCEE
T ss_pred cccccHHHHHHHHHHHhcCCcEEEEEeCCCCHHhhCCCCCceEE-cCCCHHHHHhhCCEEEeCCcHHHHHHHHHhCCCEE
Confidence 456788999999999999999876421 000 011122 343 99999999999999999
Q ss_pred eccccccchhhhhhhhccccceEEecccCCccccHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHh
Q 044624 279 GWPLAAEQFYNSNLLGEEVGVCAEVARGMNCAVLKEHIVVKIELVMNETEKGKPMRMKDLEVKEIIDNA 347 (358)
Q Consensus 279 ~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~l~~ai~~ll~~~~~~~~~r~~a~~l~~~~~~a 347 (358)
++|...||+.|+.++++. |+|+.++. +.+++++|+++|+++|+|+ +|+++++++++++++.
T Consensus 304 ~~p~~~dq~~~a~~~~~~-g~g~~~~~---~~~~~~~l~~~i~~ll~~~----~~~~~~~~~~~~~~~~ 364 (384)
T 2p6p_A 304 LIPKGSVLEAPARRVADY-GAAIALLP---GEDSTEAIADSCQELQAKD----TYARRAQDLSREISGM 364 (384)
T ss_dssp ECCCSHHHHHHHHHHHHH-TSEEECCT---TCCCHHHHHHHHHHHHHCH----HHHHHHHHHHHHHHTS
T ss_pred EccCcccchHHHHHHHHC-CCeEecCc---CCCCHHHHHHHHHHHHcCH----HHHHHHHHHHHHHHhC
Confidence 999999999999999877 99999876 5689999999999999999 9999999999988753
No 15
>2iyf_A OLED, oleandomycin glycosyltransferase; antibiotic resistance, glycosylation, enzyme, macrolide, carbohydrate; HET: ERY UDP; 1.7A {Streptomyces antibioticus}
Probab=99.97 E-value=1.3e-29 Score=240.61 Aligned_cols=311 Identities=16% Similarity=0.175 Sum_probs=195.7
Q ss_pred CcccCCCcChHHHHHHHHHHHhCCCcEEEEEeCCcchhhhhhcCCCCCCeEEEeccCCccCCCCCCCCCC---CCCCCch
Q 044624 1 MLPFMAQGHVIPFLALAHHLESTKNYTIAFVNTHLNIKKIKSSLPQSSPIHFLETPFNIIDHDLPPCTEN---TDSHPFD 77 (358)
Q Consensus 1 ~~~~p~~GH~~P~l~La~~L~~~rGh~Vt~~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~---~~~~~~~ 77 (358)
++++++.||++|++.|+++|++ +||+|++++++...+.+.. .+++++.++.. .+..... .......
T Consensus 12 ~~~~~~~Gh~~p~~~la~~L~~-~G~~V~~~~~~~~~~~~~~-----~g~~~~~~~~~-----~~~~~~~~~~~~~~~~~ 80 (430)
T 2iyf_A 12 MFSIAAHGHVNPSLEVIRELVA-RGHRVTYAIPPVFADKVAA-----TGPRPVLYHST-----LPGPDADPEAWGSTLLD 80 (430)
T ss_dssp EECCSCHHHHGGGHHHHHHHHH-TTCEEEEEECGGGHHHHHT-----TSCEEEECCCC-----SCCTTSCGGGGCSSHHH
T ss_pred EEeCCCCccccchHHHHHHHHH-CCCeEEEEeCHHHHHHHHh-----CCCEEEEcCCc-----CccccccccccchhhHH
Confidence 3578899999999999999999 9999999999887766666 78999876631 1111110 0000001
Q ss_pred HHHHHHHHHhhchHHHHHHHHHHhhhcCCCCCcEEEECCCCccHHHHHHHhCCceEEEcchhH----HHH----------
Q 044624 78 VVRKLLEATLSFKPHFKKLIIDLIDEQNGHKPLCIITDMFFGWCKEIAQEYGIFHAIFIEGGG----FGF---------- 143 (358)
Q Consensus 78 ~~~~~~~~~~~~~~~l~~ll~~~~~~~~~~~pd~vV~D~~~~~~~~~A~~lgiP~v~~~~~~~----~~~---------- 143 (358)
....+..........+.+++++. +||+||+|.+.+++..+|+++|||++.+++... ...
T Consensus 81 ~~~~~~~~~~~~~~~l~~~l~~~-------~pD~Vi~d~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~~~~~ 153 (430)
T 2iyf_A 81 NVEPFLNDAIQALPQLADAYADD-------IPDLVLHDITSYPARVLARRWGVPAVSLSPNLVAWKGYEEEVAEPMWREP 153 (430)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTS-------CCSEEEEETTCHHHHHHHHHHTCCEEEEESSCCCCTTHHHHTHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhhcc-------CCCEEEECCccHHHHHHHHHcCCCEEEEecccccccccccccccchhhhh
Confidence 11111111223344455555554 899999999878888999999999999875432 000
Q ss_pred ---HHH----hhhhccCCCCCCC---------CCccccCCCCCCcc-----cC-c-ccccCCCCCCCCCCCCCChhHHHH
Q 044624 144 ---ACY----YSLWVDLPHRNTD---------SDEFLLLDFPEAST-----IH-P-VLRFTGSKAGAGKEHGISAELCKN 200 (358)
Q Consensus 144 ---~~~----~~~~~~~p~~~~~---------~~~~~~p~~~~~~~-----~~-p-~~~~~~~~~~~~~~~~~~~~~~~~ 200 (358)
... ..........+.. .+....+ .+..+. +. . +... |+... ...+..+
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~v~~v-G~~~~-------~~~~~~~ 224 (430)
T 2iyf_A 154 RQTERGRAYYARFEAWLKENGITEHPDTFASHPPRSLVL-IPKALQPHADRVDEDVYTFV-GACQG-------DRAEEGG 224 (430)
T ss_dssp HHSHHHHHHHHHHHHHHHHTTCCSCHHHHHHCCSSEEEC-SCGGGSTTGGGSCTTTEEEC-CCCC------------CCC
T ss_pred ccchHHHHHHHHHHHHHHHhCCCCCHHHHhcCCCcEEEe-CcHHhCCCcccCCCccEEEe-CCcCC-------CCCCCCC
Confidence 000 0000000000000 0000000 000000 00 0 1111 21110 0001124
Q ss_pred HhhcCCCCceEEEEeccCCCCCHHHHHHHHHHHHhC-CCcEEEEecCCCC---CCCCCC--CCcccc-------------
Q 044624 201 WLDRKPCRSVLYVSFGSQDTIAVSQMVQLAMALEAS-GKNFIWIVRPPIG---FDINSE--FRANDA------------- 261 (358)
Q Consensus 201 wld~~~~~~vvyvs~GS~~~~~~~~~~~~~~al~~~-~~~~lw~~~~~~~---~~~~~~--~~~~wl------------- 261 (358)
|.+..+++++||+++||......+.+.+++++++.. +.+++|+++.... +..... ....|+
T Consensus 225 ~~~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~~l~~~~~~~~~~~~G~~~~~~~l~~~~~~v~~~~~~~~~~~l~~ad~~v 304 (430)
T 2iyf_A 225 WQRPAGAEKVVLVSLGSAFTKQPAFYRECVRAFGNLPGWHLVLQIGRKVTPAELGELPDNVEVHDWVPQLAILRQADLFV 304 (430)
T ss_dssp CCCCTTCSEEEEEECTTTCC-CHHHHHHHHHHHTTCTTEEEEEECC---CGGGGCSCCTTEEEESSCCHHHHHTTCSEEE
T ss_pred CccccCCCCeEEEEcCCCCCCcHHHHHHHHHHHhcCCCeEEEEEeCCCCChHHhccCCCCeEEEecCCHHHHhhccCEEE
Confidence 665555678999999999855567788999999886 7889888875321 111111 112332
Q ss_pred --cCCcchhhhhhcCcceEeccccccchhhhhhhhccccceEEecccCCccccHHHHHHHHHHHhcCCCCCHHHHHHHHH
Q 044624 262 --DGTQSALEALSHGVPINGWPLAAEQFYNSNLLGEEVGVCAEVARGMNCAVLKEHIVVKIELVMNETEKGKPMRMKDLE 339 (358)
Q Consensus 262 --gG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~l~~ai~~ll~~~~~~~~~r~~a~~ 339 (358)
||+||++||+++|+|+|++|..+||..|++++++. |+|+.+.. +.+++++|+++|+++|+|+ ++++++++
T Consensus 305 ~~~G~~t~~Ea~~~G~P~i~~p~~~~q~~~a~~~~~~-g~g~~~~~---~~~~~~~l~~~i~~ll~~~----~~~~~~~~ 376 (430)
T 2iyf_A 305 THAGAGGSQEGLATATPMIAVPQAVDQFGNADMLQGL-GVARKLAT---EEATADLLRETALALVDDP----EVARRLRR 376 (430)
T ss_dssp ECCCHHHHHHHHHTTCCEEECCCSHHHHHHHHHHHHT-TSEEECCC---C-CCHHHHHHHHHHHHHCH----HHHHHHHH
T ss_pred ECCCccHHHHHHHhCCCEEECCCccchHHHHHHHHHc-CCEEEcCC---CCCCHHHHHHHHHHHHcCH----HHHHHHHH
Confidence 99999999999999999999999999999999887 99999976 5689999999999999999 89998888
Q ss_pred HHHHHHH
Q 044624 340 VKEIIDN 346 (358)
Q Consensus 340 l~~~~~~ 346 (358)
+++.+++
T Consensus 377 ~~~~~~~ 383 (430)
T 2iyf_A 377 IQAEMAQ 383 (430)
T ss_dssp HHHHHHH
T ss_pred HHHHHHh
Confidence 8877654
No 16
>4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A*
Probab=99.97 E-value=4.9e-30 Score=241.08 Aligned_cols=318 Identities=14% Similarity=0.121 Sum_probs=190.7
Q ss_pred CcccCCCcChHHHHHHHHHHHhCCCcEEEEEeCCcchhhhhhcCCCCCCeEEEeccCCccCCCCC--CCCCCCCCCCc--
Q 044624 1 MLPFMAQGHVIPFLALAHHLESTKNYTIAFVNTHLNIKKIKSSLPQSSPIHFLETPFNIIDHDLP--PCTENTDSHPF-- 76 (358)
Q Consensus 1 ~~~~p~~GH~~P~l~La~~L~~~rGh~Vt~~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~--~~~~~~~~~~~-- 76 (358)
|++.++.||++|++.|+++|++ +||+|++++++.+.+.+.. .++.+..++.......+. ...........
T Consensus 20 ~~~~~~~gh~~~~~~La~~L~~-~GheV~v~~~~~~~~~~~~-----~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (398)
T 4fzr_A 20 VIAGCSEGFVMPLVPLSWALRA-AGHEVLVAASENMGPTVTG-----AGLPFAPTCPSLDMPEVLSWDREGNRTTMPREE 93 (398)
T ss_dssp EECCSSHHHHGGGHHHHHHHHH-TTCEEEEEEEGGGHHHHHH-----TTCCEEEEESSCCHHHHHSBCTTSCBCCCCSSH
T ss_pred EEcCCCcchHHHHHHHHHHHHH-CCCEEEEEcCHHHHHHHHh-----CCCeeEecCCccchHhhhhhhccCcccccccch
Confidence 3567899999999999999999 9999999999888888877 788888776310000000 00000000110
Q ss_pred -hHHHHH---HH-HHhhchHHHHHHHHHHhhhcCCCCCcEEEECCCCccHHHHHHHhCCceEEEcchhHHHH------HH
Q 044624 77 -DVVRKL---LE-ATLSFKPHFKKLIIDLIDEQNGHKPLCIITDMFFGWCKEIAQEYGIFHAIFIEGGGFGF------AC 145 (358)
Q Consensus 77 -~~~~~~---~~-~~~~~~~~l~~ll~~~~~~~~~~~pd~vV~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~------~~ 145 (358)
...... .. ....+...+.++++++ +||+||+|...+++..+|+.+|||++.+........ ..
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-------~pDlVv~d~~~~~~~~~a~~~giP~v~~~~~~~~~~~~~~~~~~ 166 (398)
T 4fzr_A 94 KPLLEHIGRGYGRLVLRMRDEALALAERW-------KPDLVLTETYSLTGPLVAATLGIPWIEQSIRLASPELIKSAGVG 166 (398)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------CCSEEEEETTCTHHHHHHHHHTCCEEEECCSSCCCHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHhC-------CCCEEEECccccHHHHHHHhhCCCEEEeccCCCCchhhhHHHHH
Confidence 111111 11 1123445667777777 899999999888888999999999998765421100 00
Q ss_pred Hh--hhhccCCCCCCCCCccccCCCCCCcccC---cccccCCCCCCCCCCCCCChhHHHHHhhcCCCCceEEEEeccCCC
Q 044624 146 YY--SLWVDLPHRNTDSDEFLLLDFPEASTIH---PVLRFTGSKAGAGKEHGISAELCKNWLDRKPCRSVLYVSFGSQDT 220 (358)
Q Consensus 146 ~~--~~~~~~p~~~~~~~~~~~p~~~~~~~~~---p~~~~~~~~~~~~~~~~~~~~~~~~wld~~~~~~vvyvs~GS~~~ 220 (358)
.. ....+. ..........+-..+..+... +..+. ... .......++.+|+...+++++|||++||+..
T Consensus 167 ~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~--~~~~~~~~~~~~~~~~~~~~~v~v~~G~~~~ 239 (398)
T 4fzr_A 167 ELAPELAELG-LTDFPDPLLSIDVCPPSMEAQPKPGTTKM----RYV--PYNGRNDQVPSWVFEERKQPRLCLTFGTRVP 239 (398)
T ss_dssp HTHHHHHTTT-CSSCCCCSEEEECSCGGGC----CCCEEC----CCC--CCCCSSCCCCHHHHSCCSSCEEECC------
T ss_pred HHHHHHHHcC-CCCCCCCCeEEEeCChhhCCCCCCCCCCe----eee--CCCCCCCCCchhhhcCCCCCEEEEEccCccc
Confidence 00 000110 000000001111111111100 00000 000 0000122344577766667899999999964
Q ss_pred C--------CHHHHHHHHHHHHhCCCcEEEEecCCC--CCCCCCCC--Ccccc---------------cCCcchhhhhhc
Q 044624 221 I--------AVSQMVQLAMALEASGKNFIWIVRPPI--GFDINSEF--RANDA---------------DGTQSALEALSH 273 (358)
Q Consensus 221 ~--------~~~~~~~~~~al~~~~~~~lw~~~~~~--~~~~~~~~--~~~wl---------------gG~~s~~eal~~ 273 (358)
. ..+.+..++++++..+.+++|+.+... .+...... ..+|+ ||.||++||+++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~al~~~~~~~v~~~~~~~~~~l~~~~~~v~~~~~~~~~~ll~~ad~~v~~gG~~t~~Ea~~~ 319 (398)
T 4fzr_A 240 LPNTNTIPGGLSLLQALSQELPKLGFEVVVAVSDKLAQTLQPLPEGVLAAGQFPLSAIMPACDVVVHHGGHGTTLTCLSE 319 (398)
T ss_dssp ----------CCSHHHHHHHGGGGTCEEEECCCC--------CCTTEEEESCCCHHHHGGGCSEEEECCCHHHHHHHHHT
T ss_pred ccccccccchHHHHHHHHHHHHhCCCEEEEEeCCcchhhhccCCCcEEEeCcCCHHHHHhhCCEEEecCCHHHHHHHHHh
Confidence 3 234578899999999999999887542 11111111 11222 999999999999
Q ss_pred CcceEeccccccchhhhhhhhccccceEEecccCCccccHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHH
Q 044624 274 GVPINGWPLAAEQFYNSNLLGEEVGVCAEVARGMNCAVLKEHIVVKIELVMNETEKGKPMRMKDLEVKEIIDN 346 (358)
Q Consensus 274 GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~l~~ai~~ll~~~~~~~~~r~~a~~l~~~~~~ 346 (358)
|+|+|++|...||+.|+.++++. |+|+.++. +.+++++|+++|+++|+|+ .|++++++.++.+++
T Consensus 320 G~P~v~~p~~~~q~~~a~~~~~~-g~g~~~~~---~~~~~~~l~~ai~~ll~~~----~~~~~~~~~~~~~~~ 384 (398)
T 4fzr_A 320 GVPQVSVPVIAEVWDSARLLHAA-GAGVEVPW---EQAGVESVLAACARIRDDS----SYVGNARRLAAEMAT 384 (398)
T ss_dssp TCCEEECCCSGGGHHHHHHHHHT-TSEEECC----------CHHHHHHHHHHCT----HHHHHHHHHHHHHTT
T ss_pred CCCEEecCCchhHHHHHHHHHHc-CCEEecCc---ccCCHHHHHHHHHHHHhCH----HHHHHHHHHHHHHHc
Confidence 99999999999999999999988 99999986 6789999999999999999 999999999888755
No 17
>3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A*
Probab=99.96 E-value=6.6e-29 Score=233.41 Aligned_cols=313 Identities=11% Similarity=0.079 Sum_probs=200.4
Q ss_pred CcccCCCcChHHHHHHHHHHHhCCCcEEEEEeCCcchhhhhhcCCCCCCeEEEeccCCccCCCC--------C---CCCC
Q 044624 1 MLPFMAQGHVIPFLALAHHLESTKNYTIAFVNTHLNIKKIKSSLPQSSPIHFLETPFNIIDHDL--------P---PCTE 69 (358)
Q Consensus 1 ~~~~p~~GH~~P~l~La~~L~~~rGh~Vt~~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~--------~---~~~~ 69 (358)
|++.++.||++|++.|+++|++ +||+|+++++ .+.+.++. .|+++..++...+.... + ....
T Consensus 25 ~~~~~~~Ghv~~~~~La~~L~~-~GheV~v~~~-~~~~~~~~-----~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (398)
T 3oti_A 25 FVSSPGIGHLFPLIQLAWGFRT-AGHDVLIAVA-EHADRAAA-----AGLEVVDVAPDYSAVKVFEQVAKDNPRFAETVA 97 (398)
T ss_dssp EECCSSHHHHGGGHHHHHHHHH-TTCEEEEEES-SCHHHHHT-----TTCEEEESSTTCCHHHHHHHHHHHCHHHHHTGG
T ss_pred EEcCCCcchHhHHHHHHHHHHH-CCCEEEEecc-chHHHHHh-----CCCeeEecCCccCHHHHhhhcccCCcccccccc
Confidence 3567899999999999999999 9999999999 77777777 79999977632000000 0 0000
Q ss_pred -CCCCCCchHHHHH-HHHHhhchHHHHHHHHHHhhhcCCCCCcEEEECCCCccHHHHHHHhCCceEEEcchhHHHH----
Q 044624 70 -NTDSHPFDVVRKL-LEATLSFKPHFKKLIIDLIDEQNGHKPLCIITDMFFGWCKEIAQEYGIFHAIFIEGGGFGF---- 143 (358)
Q Consensus 70 -~~~~~~~~~~~~~-~~~~~~~~~~l~~ll~~~~~~~~~~~pd~vV~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~---- 143 (358)
..... ......+ ......+...+.++++++ +||+||+|...+++..+|+.+|||++.+........
T Consensus 98 ~~~~~~-~~~~~~~~~~~~~~~~~~l~~~l~~~-------~pDlVv~d~~~~~~~~aA~~~giP~v~~~~~~~~~~~~~~ 169 (398)
T 3oti_A 98 TRPAID-LEEWGVQIAAVNRPLVDGTMALVDDY-------RPDLVVYEQGATVGLLAADRAGVPAVQRNQSAWRTRGMHR 169 (398)
T ss_dssp GSCCCS-GGGGHHHHHHHHGGGHHHHHHHHHHH-------CCSEEEEETTCHHHHHHHHHHTCCEEEECCTTCCCTTHHH
T ss_pred CChhhh-HHHHHHHHHHHHHHHHHHHHHHHHHc-------CCCEEEECchhhHHHHHHHHcCCCEEEEeccCCCccchhh
Confidence 00000 1111222 222345667788888888 899999998888888999999999998764421100
Q ss_pred --HHHh--hhhccCCCCCCCCCccccCCCCCCcccCcccccCCCCCCCCCCCCCChhHHHHHhhcCCCCceEEEEeccCC
Q 044624 144 --ACYY--SLWVDLPHRNTDSDEFLLLDFPEASTIHPVLRFTGSKAGAGKEHGISAELCKNWLDRKPCRSVLYVSFGSQD 219 (358)
Q Consensus 144 --~~~~--~~~~~~p~~~~~~~~~~~p~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~wld~~~~~~vvyvs~GS~~ 219 (358)
.... ....+. .. .......+-..+..+.... .....+.... .........+|+...+++++|||++||+.
T Consensus 170 ~~~~~l~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~v~v~~G~~~ 243 (398)
T 3oti_A 170 SIASFLTDLMDKHQ-VS-LPEPVATIESFPPSLLLEA-EPEGWFMRWV---PYGGGAVLGDRLPPVPARPEVAITMGTIE 243 (398)
T ss_dssp HHHTTCHHHHHHTT-CC-CCCCSEEECSSCGGGGTTS-CCCSBCCCCC---CCCCCEECCSSCCCCCSSCEEEECCTTTH
T ss_pred HHHHHHHHHHHHcC-CC-CCCCCeEEEeCCHHHCCCC-CCCCCCcccc---CCCCCcCCchhhhcCCCCCEEEEEcCCCc
Confidence 0000 000010 00 0000011111221111100 0000000000 00112223346665566789999999996
Q ss_pred CC--CHHHHHHHHHHHHhCCCcEEEEecCCCC--CCCCCCC--Ccccc---------------cCCcchhhhhhcCcceE
Q 044624 220 TI--AVSQMVQLAMALEASGKNFIWIVRPPIG--FDINSEF--RANDA---------------DGTQSALEALSHGVPIN 278 (358)
Q Consensus 220 ~~--~~~~~~~~~~al~~~~~~~lw~~~~~~~--~~~~~~~--~~~wl---------------gG~~s~~eal~~GvP~l 278 (358)
.. ..+.+.+++++|+..+.+++|+.+.... +.....+ ...|+ ||.||++||+++|+|+|
T Consensus 244 ~~~~~~~~~~~~~~~l~~~~~~~v~~~g~~~~~~l~~~~~~v~~~~~~~~~~ll~~ad~~v~~~G~~t~~Eal~~G~P~v 323 (398)
T 3oti_A 244 LQAFGIGAVEPIIAAAGEVDADFVLALGDLDISPLGTLPRNVRAVGWTPLHTLLRTCTAVVHHGGGGTVMTAIDAGIPQL 323 (398)
T ss_dssp HHHHCGGGHHHHHHHHHTSSSEEEEECTTSCCGGGCSCCTTEEEESSCCHHHHHTTCSEEEECCCHHHHHHHHHHTCCEE
T ss_pred cccCcHHHHHHHHHHHHcCCCEEEEEECCcChhhhccCCCcEEEEccCCHHHHHhhCCEEEECCCHHHHHHHHHhCCCEE
Confidence 43 5567888999999999999999876531 1111111 11222 99999999999999999
Q ss_pred eccccccchhhh--hhhhccccceEEecccCCccccHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHH
Q 044624 279 GWPLAAEQFYNS--NLLGEEVGVCAEVARGMNCAVLKEHIVVKIELVMNETEKGKPMRMKDLEVKEIIDN 346 (358)
Q Consensus 279 ~~P~~~DQ~~na--~~v~~~~G~G~~l~~~~~~~~~~~~l~~ai~~ll~~~~~~~~~r~~a~~l~~~~~~ 346 (358)
++|+..||..|+ .++++. |+|+.++. +..+++.|+ ++|+|+ .|+++++++++++++
T Consensus 324 ~~p~~~dq~~~a~~~~~~~~-g~g~~~~~---~~~~~~~l~----~ll~~~----~~~~~~~~~~~~~~~ 381 (398)
T 3oti_A 324 LAPDPRDQFQHTAREAVSRR-GIGLVSTS---DKVDADLLR----RLIGDE----SLRTAAREVREEMVA 381 (398)
T ss_dssp ECCCTTCCSSCTTHHHHHHH-TSEEECCG---GGCCHHHHH----HHHHCH----HHHHHHHHHHHHHHT
T ss_pred EcCCCchhHHHHHHHHHHHC-CCEEeeCC---CCCCHHHHH----HHHcCH----HHHHHHHHHHHHHHh
Confidence 999999999999 999987 99999986 567888777 888999 999999999988765
No 18
>3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A*
Probab=99.96 E-value=8.9e-28 Score=225.04 Aligned_cols=317 Identities=12% Similarity=0.084 Sum_probs=196.6
Q ss_pred CcccCCCcChHHHHHHHHHHHhCCCcEEEEEeCCcchhhhhhcCCCCCCeEEEec-cCCccCCCC-----CCCCCCCCCC
Q 044624 1 MLPFMAQGHVIPFLALAHHLESTKNYTIAFVNTHLNIKKIKSSLPQSSPIHFLET-PFNIIDHDL-----PPCTENTDSH 74 (358)
Q Consensus 1 ~~~~p~~GH~~P~l~La~~L~~~rGh~Vt~~t~~~~~~~~~~~~~~~~~~~~~~~-p~~~~~~~~-----~~~~~~~~~~ 74 (358)
|++.++.||++|++.|+++|++ +||+|++++++...+.+.. .++++..+ +.+...+.. +.........
T Consensus 6 ~~~~~~~gh~~~~~~la~~L~~-~GheV~v~~~~~~~~~~~~-----~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (391)
T 3tsa_A 6 VVPLPYPTHLMAMVPLCWALQA-SGHEVLIAAPPELQATAHG-----AGLTTAGIRGNDRTGDTGGTTQLRFPNPAFGQR 79 (391)
T ss_dssp EECCSCHHHHHTTHHHHHHHHH-TTCEEEEEECHHHHHHHHH-----BTCEEEEC--------------CCSCCGGGGCT
T ss_pred EEcCCCcchhhhHHHHHHHHHH-CCCEEEEecChhhHHHHHh-----CCCceeeecCCccchhhhhhhcccccccccccc
Confidence 3567899999999999999999 9999999999877777777 78888877 321100000 0000000001
Q ss_pred CchHHHHHHHH-Hhhc-------hHHHHHHHHHHhhhcCCCCCcEEEECCCCccHHHHHHHhCCceEEEcchhHH-----
Q 044624 75 PFDVVRKLLEA-TLSF-------KPHFKKLIIDLIDEQNGHKPLCIITDMFFGWCKEIAQEYGIFHAIFIEGGGF----- 141 (358)
Q Consensus 75 ~~~~~~~~~~~-~~~~-------~~~l~~ll~~~~~~~~~~~pd~vV~D~~~~~~~~~A~~lgiP~v~~~~~~~~----- 141 (358)
........+.. ...+ ...+.++++++ +||+||+|...+++..+|+.+|||++.+......
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-------~PD~Vv~~~~~~~~~~aa~~~giP~v~~~~~~~~~~~~~ 152 (391)
T 3tsa_A 80 DTEAGRQLWEQTASNVAQSSLDQLPEYLRLAEAW-------RPSVLLVDVCALIGRVLGGLLDLPVVLHRWGVDPTAGPF 152 (391)
T ss_dssp TSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------CCSEEEEETTCHHHHHHHHHTTCCEEEECCSCCCTTTHH
T ss_pred cchhHHHHHHHHHHHHhhcchhhHHHHHHHHHhc-------CCCEEEeCcchhHHHHHHHHhCCCEEEEecCCccccccc
Confidence 11111222211 1233 56667777777 8999999987777888999999999998543210
Q ss_pred --HHHHHh--hhhcc-CCCCCCCCCccccCCCCCCcccC---cccccCCCCCCCCCCCCCChhHHHHHhhcCCCCceEEE
Q 044624 142 --GFACYY--SLWVD-LPHRNTDSDEFLLLDFPEASTIH---PVLRFTGSKAGAGKEHGISAELCKNWLDRKPCRSVLYV 213 (358)
Q Consensus 142 --~~~~~~--~~~~~-~p~~~~~~~~~~~p~~~~~~~~~---p~~~~~~~~~~~~~~~~~~~~~~~~wld~~~~~~vvyv 213 (358)
...... ....+ .+... ..+ ..+-..+..+.+. ...+. ... ..........|+...+++++||+
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~----~~~---p~~~~~~~~~~~~~~~~~~~vlv 223 (391)
T 3tsa_A 153 SDRAHELLDPVCRHHGLTGLP-TPE-LILDPCPPSLQASDAPQGAPV----QYV---PYNGSGAFPAWGAARTSARRVCI 223 (391)
T ss_dssp HHHHHHHHHHHHHHTTSSSSC-CCS-EEEECSCGGGSCTTSCCCEEC----CCC---CCCCCEECCGGGSSCCSSEEEEE
T ss_pred cchHHHHHHHHHHHcCCCCCC-CCc-eEEEecChhhcCCCCCccCCe----eee---cCCCCcCCCchhhcCCCCCEEEE
Confidence 000000 00111 01000 000 0011111111100 00000 000 00111223357776566789999
Q ss_pred EeccCCC---CCHHHHHHHHHHHHhC-CCcEEEEecCCC--CCCCCCCC--Ccccc---------------cCCcchhhh
Q 044624 214 SFGSQDT---IAVSQMVQLAMALEAS-GKNFIWIVRPPI--GFDINSEF--RANDA---------------DGTQSALEA 270 (358)
Q Consensus 214 s~GS~~~---~~~~~~~~~~~al~~~-~~~~lw~~~~~~--~~~~~~~~--~~~wl---------------gG~~s~~ea 270 (358)
++||... ...+.+..++++ +.. +.+++|+.+... .+...... ..+|+ ||.||++||
T Consensus 224 ~~G~~~~~~~~~~~~~~~~~~~-~~~p~~~~v~~~~~~~~~~l~~~~~~v~~~~~~~~~~ll~~ad~~v~~~G~~t~~Ea 302 (391)
T 3tsa_A 224 CMGRMVLNATGPAPLLRAVAAA-TELPGVEAVIAVPPEHRALLTDLPDNARIAESVPLNLFLRTCELVICAGGSGTAFTA 302 (391)
T ss_dssp ECCHHHHHHHCSHHHHHHHHHH-HTSTTEEEEEECCGGGGGGCTTCCTTEEECCSCCGGGTGGGCSEEEECCCHHHHHHH
T ss_pred EcCCCCCcccchHHHHHHHHHh-ccCCCeEEEEEECCcchhhcccCCCCEEEeccCCHHHHHhhCCEEEeCCCHHHHHHH
Confidence 9999853 236677888888 877 788998876532 11111111 11221 999999999
Q ss_pred hhcCcceEeccccccchhhhhhhhccccceEEecccCCccccHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHH
Q 044624 271 LSHGVPINGWPLAAEQFYNSNLLGEEVGVCAEVARGMNCAVLKEHIVVKIELVMNETEKGKPMRMKDLEVKEIIDN 346 (358)
Q Consensus 271 l~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~l~~ai~~ll~~~~~~~~~r~~a~~l~~~~~~ 346 (358)
+++|+|+|++|+..||+.|+.++++. |+|+.+... ....+++.|.++|+++|+|+ +|+++++++++.+.+
T Consensus 303 ~~~G~P~v~~p~~~~q~~~a~~~~~~-g~g~~~~~~-~~~~~~~~l~~ai~~ll~~~----~~~~~~~~~~~~~~~ 372 (391)
T 3tsa_A 303 TRLGIPQLVLPQYFDQFDYARNLAAA-GAGICLPDE-QAQSDHEQFTDSIATVLGDT----GFAAAAIKLSDEITA 372 (391)
T ss_dssp HHTTCCEEECCCSTTHHHHHHHHHHT-TSEEECCSH-HHHTCHHHHHHHHHHHHTCT----HHHHHHHHHHHHHHT
T ss_pred HHhCCCEEecCCcccHHHHHHHHHHc-CCEEecCcc-cccCCHHHHHHHHHHHHcCH----HHHHHHHHHHHHHHc
Confidence 99999999999999999999999988 999988620 01378999999999999999 999999998888754
No 19
>3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A*
Probab=99.94 E-value=4e-25 Score=208.26 Aligned_cols=319 Identities=14% Similarity=0.127 Sum_probs=198.8
Q ss_pred CcccCCCcChHHHHHHHHHHHhCCCcEEEEEeCCcchhhhhhcCCCCCCeEEEeccCCccCCCC--------CCCCCCCC
Q 044624 1 MLPFMAQGHVIPFLALAHHLESTKNYTIAFVNTHLNIKKIKSSLPQSSPIHFLETPFNIIDHDL--------PPCTENTD 72 (358)
Q Consensus 1 ~~~~p~~GH~~P~l~La~~L~~~rGh~Vt~~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~--------~~~~~~~~ 72 (358)
+++.++.||++|++.|+++|++ +||+|++++++...+.+.. .++++..++... ..++ ........
T Consensus 25 ~~~~~~~Gh~~~~~~la~~L~~-~GheV~v~~~~~~~~~~~~-----~g~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 97 (412)
T 3otg_A 25 FASLGTHGHTYPLLPLATAARA-AGHEVTFATGEGFAGTLRK-----LGFEPVATGMPV-FDGFLAALRIRFDTDSPEGL 97 (412)
T ss_dssp EECCSSHHHHGGGHHHHHHHHH-TTCEEEEEECGGGHHHHHH-----TTCEEEECCCCH-HHHHHHHHHHHHSCSCCTTC
T ss_pred EEcCCCcccHHHHHHHHHHHHH-CCCEEEEEccHHHHHHHHh-----cCCceeecCccc-ccchhhhhhhhhcccCCccC
Confidence 3567889999999999999999 9999999999877666766 789998776200 0000 00000000
Q ss_pred CCCch---HHHHHHH-H-HhhchHHHHHHHHHHhhhcCCCCCcEEEECCCCccHHHHHHHhCCceEEEcchhHH---HHH
Q 044624 73 SHPFD---VVRKLLE-A-TLSFKPHFKKLIIDLIDEQNGHKPLCIITDMFFGWCKEIAQEYGIFHAIFIEGGGF---GFA 144 (358)
Q Consensus 73 ~~~~~---~~~~~~~-~-~~~~~~~l~~ll~~~~~~~~~~~pd~vV~D~~~~~~~~~A~~lgiP~v~~~~~~~~---~~~ 144 (358)
. ... ....+.. . ...+...+.+++++. +||+||+|...+++..+|+.+|||++.+...... ...
T Consensus 98 ~-~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-------~pDvVv~~~~~~~~~~aa~~~giP~v~~~~~~~~~~~~~~ 169 (412)
T 3otg_A 98 T-PEQLSELPQIVFGRVIPQRVFDELQPVIERL-------RPDLVVQEISNYGAGLAALKAGIPTICHGVGRDTPDDLTR 169 (412)
T ss_dssp C-HHHHTTSHHHHHHTHHHHHHHHHHHHHHHHH-------CCSEEEEETTCHHHHHHHHHHTCCEEEECCSCCCCSHHHH
T ss_pred C-hhHhhHHHHHHHhccchHHHHHHHHHHHHhc-------CCCEEEECchhhHHHHHHHHcCCCEEEecccccCchhhhH
Confidence 0 000 0111111 1 122345667777777 8999999987777888999999999987544210 000
Q ss_pred H---Hhh--hhcc-CCCC-C---CCCCccccCCCCCCcccC--cccccCCCCCCCCCCCCCChhHHHHH-hhcCCCCceE
Q 044624 145 C---YYS--LWVD-LPHR-N---TDSDEFLLLDFPEASTIH--PVLRFTGSKAGAGKEHGISAELCKNW-LDRKPCRSVL 211 (358)
Q Consensus 145 ~---~~~--~~~~-~p~~-~---~~~~~~~~p~~~~~~~~~--p~~~~~~~~~~~~~~~~~~~~~~~~w-ld~~~~~~vv 211 (358)
. ... ...+ .+.. . ...+. .+-..+..+.+. .+.....+....+ ........+| ....+++++|
T Consensus 170 ~~~~~~~~~~~~~g~~~~~~~~~~~~d~-~i~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~v 245 (412)
T 3otg_A 170 SIEEEVRGLAQRLGLDLPPGRIDGFGNP-FIDIFPPSLQEPEFRARPRRHELRPVP---FAEQGDLPAWLSSRDTARPLV 245 (412)
T ss_dssp HHHHHHHHHHHHTTCCCCSSCCGGGGCC-EEECSCGGGSCHHHHTCTTEEECCCCC---CCCCCCCCGGGGGSCTTSCEE
T ss_pred HHHHHHHHHHHHcCCCCCcccccCCCCe-EEeeCCHHhcCCcccCCCCcceeeccC---CCCCCCCCCccccccCCCCEE
Confidence 0 000 0000 0000 0 00000 011111111100 0000000000000 0011122345 3333456899
Q ss_pred EEEeccCCCCCHHHHHHHHHHHHhCCCcEEEEecCCC---CCCCCCCC--Ccccc---------------cCCcchhhhh
Q 044624 212 YVSFGSQDTIAVSQMVQLAMALEASGKNFIWIVRPPI---GFDINSEF--RANDA---------------DGTQSALEAL 271 (358)
Q Consensus 212 yvs~GS~~~~~~~~~~~~~~al~~~~~~~lw~~~~~~---~~~~~~~~--~~~wl---------------gG~~s~~eal 271 (358)
|+++||......+.+.+++++++..+.+++|+.+... .+...... ...|+ ||+||++||+
T Consensus 246 lv~~G~~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~~~~~l~~~~~~v~~~~~~~~~~~l~~ad~~v~~~g~~t~~Ea~ 325 (412)
T 3otg_A 246 YLTLGTSSGGTVEVLRAAIDGLAGLDADVLVASGPSLDVSGLGEVPANVRLESWVPQAALLPHVDLVVHHGGSGTTLGAL 325 (412)
T ss_dssp EEECTTTTCSCHHHHHHHHHHHHTSSSEEEEECCSSCCCTTCCCCCTTEEEESCCCHHHHGGGCSEEEESCCHHHHHHHH
T ss_pred EEEcCCCCcCcHHHHHHHHHHHHcCCCEEEEEECCCCChhhhccCCCcEEEeCCCCHHHHHhcCcEEEECCchHHHHHHH
Confidence 9999999755667888999999998999999987643 11111111 11221 9999999999
Q ss_pred hcCcceEeccccccchhhhhhhhccccceEEecccCCccccHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHH
Q 044624 272 SHGVPINGWPLAAEQFYNSNLLGEEVGVCAEVARGMNCAVLKEHIVVKIELVMNETEKGKPMRMKDLEVKEIIDN 346 (358)
Q Consensus 272 ~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~l~~ai~~ll~~~~~~~~~r~~a~~l~~~~~~ 346 (358)
++|+|+|++|...||..|+.++++. |+|+.+.. +.+++++|+++|.++|+|+ ++++++++.++.+.+
T Consensus 326 a~G~P~v~~p~~~~q~~~~~~v~~~-g~g~~~~~---~~~~~~~l~~ai~~ll~~~----~~~~~~~~~~~~~~~ 392 (412)
T 3otg_A 326 GAGVPQLSFPWAGDSFANAQAVAQA-GAGDHLLP---DNISPDSVSGAAKRLLAEE----SYRAGARAVAAEIAA 392 (412)
T ss_dssp HHTCCEEECCCSTTHHHHHHHHHHH-TSEEECCG---GGCCHHHHHHHHHHHHHCH----HHHHHHHHHHHHHHH
T ss_pred HhCCCEEecCCchhHHHHHHHHHHc-CCEEecCc---ccCCHHHHHHHHHHHHhCH----HHHHHHHHHHHHHhc
Confidence 9999999999999999999999988 99999986 5689999999999999999 999999888877654
No 20
>2o6l_A UDP-glucuronosyltransferase 2B7; drug metabolism, rossman, MAD, enzyme, nucleotide binding, sugar,UDP-glucuronosyltransferase, UGT; 1.80A {Homo sapiens}
Probab=99.88 E-value=2.1e-22 Score=166.49 Aligned_cols=146 Identities=17% Similarity=0.249 Sum_probs=118.2
Q ss_pred CCChhHHHHHhhcCCCCceEEEEeccCC-CCCHHHHHHHHHHHHhCCCcEEEEecCCC--CCCCCCCCCcccc-------
Q 044624 192 GISAELCKNWLDRKPCRSVLYVSFGSQD-TIAVSQMVQLAMALEASGKNFIWIVRPPI--GFDINSEFRANDA------- 261 (358)
Q Consensus 192 ~~~~~~~~~wld~~~~~~vvyvs~GS~~-~~~~~~~~~~~~al~~~~~~~lw~~~~~~--~~~~~~~~~~~wl------- 261 (358)
.+.+.++.+|++..+++++|||+|||.. ......+..++++|+..+.+++|+.+... .... +.....|+
T Consensus 5 ~~l~~~~~~~l~~~~~~~~vlv~~Gs~~~~~~~~~~~~~~~al~~~~~~~~~~~g~~~~~~~~~-~v~~~~~~~~~~~l~ 83 (170)
T 2o6l_A 5 KPLPKEMEDFVQSSGENGVVVFSLGSMVSNMTEERANVIASALAQIPQKVLWRFDGNKPDTLGL-NTRLYKWIPQNDLLG 83 (170)
T ss_dssp CCCCHHHHHHHHTTTTTCEEEEECCSCCTTCCHHHHHHHHHHHTTSSSEEEEECCSSCCTTCCT-TEEEESSCCHHHHHT
T ss_pred CCCCHHHHHHHHcCCCCCEEEEECCCCcccCCHHHHHHHHHHHHhCCCeEEEEECCcCcccCCC-cEEEecCCCHHHHhc
Confidence 3567889999998767789999999986 44667788999999988999999987542 1111 10111221
Q ss_pred ----------cCCcchhhhhhcCcceEeccccccchhhhhhhhccccceEEecccCCccccHHHHHHHHHHHhcCCCCCH
Q 044624 262 ----------DGTQSALEALSHGVPINGWPLAAEQFYNSNLLGEEVGVCAEVARGMNCAVLKEHIVVKIELVMNETEKGK 331 (358)
Q Consensus 262 ----------gG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~l~~ai~~ll~~~~~~~ 331 (358)
||+||++||+++|+|+|++|...||..||.++++. |+|+.++. +.++.++|.++|+++++|+
T Consensus 84 ~~~ad~~I~~~G~~t~~Ea~~~G~P~i~~p~~~~Q~~na~~l~~~-g~g~~~~~---~~~~~~~l~~~i~~ll~~~---- 155 (170)
T 2o6l_A 84 HPKTRAFITHGGANGIYEAIYHGIPMVGIPLFADQPDNIAHMKAR-GAAVRVDF---NTMSSTDLLNALKRVINDP---- 155 (170)
T ss_dssp STTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHTT-TSEEECCT---TTCCHHHHHHHHHHHHHCH----
T ss_pred CCCcCEEEEcCCccHHHHHHHcCCCEEeccchhhHHHHHHHHHHc-CCeEEecc---ccCCHHHHHHHHHHHHcCH----
Confidence 99999999999999999999999999999999987 99999986 6789999999999999999
Q ss_pred HHHHHHHHHHHHHHH
Q 044624 332 PMRMKDLEVKEIIDN 346 (358)
Q Consensus 332 ~~r~~a~~l~~~~~~ 346 (358)
+||++++++++.+++
T Consensus 156 ~~~~~a~~~~~~~~~ 170 (170)
T 2o6l_A 156 SYKENVMKLSRIQHD 170 (170)
T ss_dssp HHHHHHHHHC-----
T ss_pred HHHHHHHHHHHHhhC
Confidence 999999999998864
No 21
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=99.86 E-value=6e-21 Score=177.02 Aligned_cols=293 Identities=17% Similarity=0.124 Sum_probs=161.2
Q ss_pred ccCC-CcChHHHHHHHHHHHhCCCcEEEEEeCCcchh--hhhhcCCCCCCeEEEeccCCccCCCCCCCCCCCCCCCchHH
Q 044624 3 PFMA-QGHVIPFLALAHHLESTKNYTIAFVNTHLNIK--KIKSSLPQSSPIHFLETPFNIIDHDLPPCTENTDSHPFDVV 79 (358)
Q Consensus 3 ~~p~-~GH~~P~l~La~~L~~~rGh~Vt~~t~~~~~~--~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ 79 (358)
+.++ .||++|.+.||++|++ +||+|+|+++....+ .++. .++++..++.. +++... ...... ..
T Consensus 8 ~~GGTgGHi~palala~~L~~-~g~~V~~vg~~~g~e~~~v~~-----~g~~~~~i~~~----~~~~~~-~~~~~~--~~ 74 (365)
T 3s2u_A 8 MAGGTGGHVFPALACAREFQA-RGYAVHWLGTPRGIENDLVPK-----AGLPLHLIQVS----GLRGKG-LKSLVK--AP 74 (365)
T ss_dssp ECCSSHHHHHHHHHHHHHHHH-TTCEEEEEECSSSTHHHHTGG-----GTCCEEECC---------------------CH
T ss_pred EcCCCHHHHHHHHHHHHHHHh-CCCEEEEEECCchHhhchhhh-----cCCcEEEEECC----CcCCCC-HHHHHH--HH
Confidence 3444 4999999999999999 999999999876432 3444 67888877632 222110 000000 01
Q ss_pred HHHHHHHhhchHHHHHHHHHHhhhcCCCCCcEEEECCCCccH--HHHHHHhCCceEEEcchhHHHHHHHhhhhccCCCCC
Q 044624 80 RKLLEATLSFKPHFKKLIIDLIDEQNGHKPLCIITDMFFGWC--KEIAQEYGIFHAIFIEGGGFGFACYYSLWVDLPHRN 157 (358)
Q Consensus 80 ~~~~~~~~~~~~~l~~ll~~~~~~~~~~~pd~vV~D~~~~~~--~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~p~~~ 157 (358)
..+... ......++++. +||+||.+..+... ..+|+.+|||++..-............. .+.
T Consensus 75 ~~~~~~----~~~~~~~l~~~-------~PDvVi~~g~~~s~p~~laA~~~~iP~vihe~n~~~G~~nr~l~-~~a---- 138 (365)
T 3s2u_A 75 LELLKS----LFQALRVIRQL-------RPVCVLGLGGYVTGPGGLAARLNGVPLVIHEQNAVAGTANRSLA-PIA---- 138 (365)
T ss_dssp HHHHHH----HHHHHHHHHHH-------CCSEEEECSSSTHHHHHHHHHHTTCCEEEEECSSSCCHHHHHHG-GGC----
T ss_pred HHHHHH----HHHHHHHHHhc-------CCCEEEEcCCcchHHHHHHHHHcCCCEEEEecchhhhhHHHhhc-ccc----
Confidence 111111 12345677877 99999999876653 4578889999997642211000100000 000
Q ss_pred CCCCccccCCCCCCcccC-cccccCCCCCCCCCCCCCChhHHHHHhhcCCCCceEEEEeccCCCCCHHHHHHHHHHHHhC
Q 044624 158 TDSDEFLLLDFPEASTIH-PVLRFTGSKAGAGKEHGISAELCKNWLDRKPCRSVLYVSFGSQDTIAVSQMVQLAMALEAS 236 (358)
Q Consensus 158 ~~~~~~~~p~~~~~~~~~-p~~~~~~~~~~~~~~~~~~~~~~~~wld~~~~~~vvyvs~GS~~~~~~~~~~~~~~al~~~ 236 (358)
+ .....++...... ..... |.... ......... ...++ +.+++++|..||..... ..+.+.++++.+
T Consensus 139 ---~-~v~~~~~~~~~~~~k~~~~-g~pvr-~~~~~~~~~--~~~~~--~~~~~ilv~gGs~g~~~--~~~~~~~al~~l 206 (365)
T 3s2u_A 139 ---R-RVCEAFPDTFPASDKRLTT-GNPVR-GELFLDAHA--RAPLT--GRRVNLLVLGGSLGAEP--LNKLLPEALAQV 206 (365)
T ss_dssp ---S-EEEESSTTSSCC---CEEC-CCCCC-GGGCCCTTS--SCCCT--TSCCEEEECCTTTTCSH--HHHHHHHHHHTS
T ss_pred ---c-eeeecccccccCcCcEEEE-CCCCc-hhhccchhh--hcccC--CCCcEEEEECCcCCccc--cchhhHHHHHhc
Confidence 0 0001111100000 00000 00000 000000000 00122 24568898889875432 223455666654
Q ss_pred ----CCcEEEEecCCCC---------CCCCC---CCCc---ccc---------cCCcchhhhhhcCcceEecccc----c
Q 044624 237 ----GKNFIWIVRPPIG---------FDINS---EFRA---NDA---------DGTQSALEALSHGVPINGWPLA----A 284 (358)
Q Consensus 237 ----~~~~lw~~~~~~~---------~~~~~---~~~~---~wl---------gG~~s~~eal~~GvP~l~~P~~----~ 284 (358)
+..++|..+.... ..... ++.. +++ +|.+|+.|++++|+|+|.+|+- .
T Consensus 207 ~~~~~~~vi~~~G~~~~~~~~~~~~~~~~~~~v~~f~~dm~~~l~~aDlvI~raG~~Tv~E~~a~G~P~Ilip~p~~~~~ 286 (365)
T 3s2u_A 207 PLEIRPAIRHQAGRQHAEITAERYRTVAVEADVAPFISDMAAAYAWADLVICRAGALTVSELTAAGLPAFLVPLPHAIDD 286 (365)
T ss_dssp CTTTCCEEEEECCTTTHHHHHHHHHHTTCCCEEESCCSCHHHHHHHCSEEEECCCHHHHHHHHHHTCCEEECC-----CC
T ss_pred ccccceEEEEecCccccccccceecccccccccccchhhhhhhhccceEEEecCCcchHHHHHHhCCCeEEeccCCCCCc
Confidence 3456676664320 00000 1111 111 8999999999999999999863 5
Q ss_pred cchhhhhhhhccccceEEecccCCccccHHHHHHHHHHHhcCCCCCHHHHHHHHHH
Q 044624 285 EQFYNSNLLGEEVGVCAEVARGMNCAVLKEHIVVKIELVMNETEKGKPMRMKDLEV 340 (358)
Q Consensus 285 DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~l~~ai~~ll~~~~~~~~~r~~a~~l 340 (358)
+|..||+.+++. |+|+.+.. ..++++.|.++|.++|+|++.-++|+++|+++
T Consensus 287 ~Q~~NA~~l~~~-G~a~~l~~---~~~~~~~L~~~i~~ll~d~~~~~~m~~~a~~~ 338 (365)
T 3s2u_A 287 HQTRNAEFLVRS-GAGRLLPQ---KSTGAAELAAQLSEVLMHPETLRSMADQARSL 338 (365)
T ss_dssp HHHHHHHHHHTT-TSEEECCT---TTCCHHHHHHHHHHHHHCTHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHC-CCEEEeec---CCCCHHHHHHHHHHHHCCHHHHHHHHHHHHhc
Confidence 899999999999 99999986 67899999999999999993333455555543
No 22
>1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A*
Probab=99.55 E-value=2e-13 Score=125.86 Aligned_cols=275 Identities=15% Similarity=0.123 Sum_probs=152.9
Q ss_pred ccCCCcChHHHHHHHHHHHhCCCcEEEEEeCCcch--hhhhhcCCCCCCeEEEeccCCccCCCCCCCCCCCCCCCchHHH
Q 044624 3 PFMAQGHVIPFLALAHHLESTKNYTIAFVNTHLNI--KKIKSSLPQSSPIHFLETPFNIIDHDLPPCTENTDSHPFDVVR 80 (358)
Q Consensus 3 ~~p~~GH~~P~l~La~~L~~~rGh~Vt~~t~~~~~--~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 80 (358)
+.+..||..+++.|+++|++ +||+|++++..... ..+.. .++++..++.. .+... . ......
T Consensus 13 ~~~~gG~~~~~~~la~~L~~-~G~~V~v~~~~~~~~~~~~~~-----~g~~~~~~~~~----~~~~~-----~-~~~~~~ 76 (364)
T 1f0k_A 13 AGGTGGHVFPGLAVAHHLMA-QGWQVRWLGTADRMEADLVPK-----HGIEIDFIRIS----GLRGK-----G-IKALIA 76 (364)
T ss_dssp CCSSHHHHHHHHHHHHHHHT-TTCEEEEEECTTSTHHHHGGG-----GTCEEEECCCC----CCTTC-----C-HHHHHT
T ss_pred eCCCccchhHHHHHHHHHHH-cCCEEEEEecCCcchhhhccc-----cCCceEEecCC----ccCcC-----c-cHHHHH
Confidence 34445999999999999999 99999999986532 23333 57887766532 11110 0 000000
Q ss_pred HHHHHHhhchHHHHHHHHHHhhhcCCCCCcEEEECCCCc--cHHHHHHHhCCceEEEcchhHHHHHHHhhhhccCCCCCC
Q 044624 81 KLLEATLSFKPHFKKLIIDLIDEQNGHKPLCIITDMFFG--WCKEIAQEYGIFHAIFIEGGGFGFACYYSLWVDLPHRNT 158 (358)
Q Consensus 81 ~~~~~~~~~~~~l~~ll~~~~~~~~~~~pd~vV~D~~~~--~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~p~~~~ 158 (358)
.... .......+.+++++. +||+|+++.... .+..+++.+|+|++.............. . ...
T Consensus 77 ~~~~-~~~~~~~l~~~l~~~-------~pDvv~~~~~~~~~~~~~~~~~~~~p~v~~~~~~~~~~~~~~-~---~~~--- 141 (364)
T 1f0k_A 77 APLR-IFNAWRQARAIMKAY-------KPDVVLGMGGYVSGPGGLAAWSLGIPVVLHEQNGIAGLTNKW-L---AKI--- 141 (364)
T ss_dssp CHHH-HHHHHHHHHHHHHHH-------CCSEEEECSSTTHHHHHHHHHHTTCCEEEEECSSSCCHHHHH-H---TTT---
T ss_pred HHHH-HHHHHHHHHHHHHhc-------CCCEEEEeCCcCchHHHHHHHHcCCCEEEEecCCCCcHHHHH-H---HHh---
Confidence 0001 111233456667766 899999987542 3456778889999875432110000000 0 000
Q ss_pred CCCccccC--C-CCCCcccCcccccCCCCCCCCCCCCCChhHHHHHhhcCCCCceEEEEeccCCCCCHHHHHHHHHHHHh
Q 044624 159 DSDEFLLL--D-FPEASTIHPVLRFTGSKAGAGKEHGISAELCKNWLDRKPCRSVLYVSFGSQDTIAVSQMVQLAMALEA 235 (358)
Q Consensus 159 ~~~~~~~p--~-~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~wld~~~~~~vvyvs~GS~~~~~~~~~~~~~~al~~ 235 (358)
.+..... . ++. .. ++++ +.... ...... ....+...++++++++..|+... ......++++++.
T Consensus 142 -~d~v~~~~~~~~~~-~~---~i~n-~v~~~---~~~~~~--~~~~~~~~~~~~~il~~~g~~~~--~k~~~~li~a~~~ 208 (364)
T 1f0k_A 142 -ATKVMQAFPGAFPN-AE---VVGN-PVRTD---VLALPL--PQQRLAGREGPVRVLVVGGSQGA--RILNQTMPQVAAK 208 (364)
T ss_dssp -CSEEEESSTTSSSS-CE---ECCC-CCCHH---HHTSCC--HHHHHTTCCSSEEEEEECTTTCC--HHHHHHHHHHHHH
T ss_pred -CCEEEecChhhcCC-ce---EeCC-ccchh---hcccch--hhhhcccCCCCcEEEEEcCchHh--HHHHHHHHHHHHH
Confidence 0000000 0 110 00 1111 00000 000000 11122222344577777778743 3333445566655
Q ss_pred C--CCcEEEEecCCCC---------CC-CCC---CCCc---ccc---------cCCcchhhhhhcCcceEecccc---cc
Q 044624 236 S--GKNFIWIVRPPIG---------FD-INS---EFRA---NDA---------DGTQSALEALSHGVPINGWPLA---AE 285 (358)
Q Consensus 236 ~--~~~~lw~~~~~~~---------~~-~~~---~~~~---~wl---------gG~~s~~eal~~GvP~l~~P~~---~D 285 (358)
+ +.++++++++... .. ... +... +++ +|.++++||+++|+|+|+.|.. .|
T Consensus 209 l~~~~~~l~i~G~~~~~~l~~~~~~~~~~~v~~~g~~~~~~~~~~~ad~~v~~sg~~~~~EAma~G~Pvi~~~~~g~~~~ 288 (364)
T 1f0k_A 209 LGDSVTIWHQSGKGSQQSVEQAYAEAGQPQHKVTEFIDDMAAAYAWADVVVCRSGALTVSEIAAAGLPALFVPFQHKDRQ 288 (364)
T ss_dssp HGGGEEEEEECCTTCHHHHHHHHHHTTCTTSEEESCCSCHHHHHHHCSEEEECCCHHHHHHHHHHTCCEEECCCCCTTCH
T ss_pred hcCCcEEEEEcCCchHHHHHHHHhhcCCCceEEecchhhHHHHHHhCCEEEECCchHHHHHHHHhCCCEEEeeCCCCchh
Confidence 4 4566777765430 00 000 1111 111 6788999999999999999987 79
Q ss_pred chhhhhhhhccccceEEecccCCccccHHHHHHHHHHHhcCC
Q 044624 286 QFYNSNLLGEEVGVCAEVARGMNCAVLKEHIVVKIELVMNET 327 (358)
Q Consensus 286 Q~~na~~v~~~~G~G~~l~~~~~~~~~~~~l~~ai~~ll~~~ 327 (358)
|..|+..+++. |.|+.++. ++.+.++++++|.++ |+
T Consensus 289 q~~~~~~~~~~-g~g~~~~~---~d~~~~~la~~i~~l--~~ 324 (364)
T 1f0k_A 289 QYWNALPLEKA-GAAKIIEQ---PQLSVDAVANTLAGW--SR 324 (364)
T ss_dssp HHHHHHHHHHT-TSEEECCG---GGCCHHHHHHHHHTC--CH
T ss_pred HHHHHHHHHhC-CcEEEecc---ccCCHHHHHHHHHhc--CH
Confidence 99999999988 99998876 556799999999999 66
No 23
>3hbm_A UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter jejuni subsp} PDB: 3hbn_A*
Probab=98.91 E-value=7e-08 Score=85.24 Aligned_cols=232 Identities=17% Similarity=0.089 Sum_probs=128.4
Q ss_pred CCCcChHHHHHHHHHHHhCCCcEEEEEeCCcchhhhhhcCCCCCCeEEEeccCCccCCCCCCCCCCCCCCCchHHHHHHH
Q 044624 5 MAQGHVIPFLALAHHLESTKNYTIAFVNTHLNIKKIKSSLPQSSPIHFLETPFNIIDHDLPPCTENTDSHPFDVVRKLLE 84 (358)
Q Consensus 5 p~~GH~~P~l~La~~L~~~rGh~Vt~~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (358)
-+.||++=.+.||++|+ +|+|++.......+.. -++.+..++. .+
T Consensus 13 IG~GHvmRcl~LA~~l~-----~v~F~~~~~~~~~~~~-----~g~~v~~l~~--------------~d----------- 57 (282)
T 3hbm_A 13 IGFGHIKRDLVLAKQYS-----DVSFACLPLEGSLIDE-----IPYPVYELSS--------------ES----------- 57 (282)
T ss_dssp TBSHHHHHHHHHHTTCS-----SEEEEECCCTTCCGGG-----CCSCEEECSS--------------SC-----------
T ss_pred ccccHHHHHHHHHHHHH-----hCEEEEecCcHhHHHH-----CCCeEEEcCc--------------cC-----------
Confidence 36899999999999887 6899987543333333 3444443320 00
Q ss_pred HHhhchHHHHHHHHHHhhhcCCCCCcEEEECCCCccHH---HHHHHhCCceEEEcchhHHHHHHHhhhhccCCCCCCCCC
Q 044624 85 ATLSFKPHFKKLIIDLIDEQNGHKPLCIITDMFFGWCK---EIAQEYGIFHAIFIEGGGFGFACYYSLWVDLPHRNTDSD 161 (358)
Q Consensus 85 ~~~~~~~~l~~ll~~~~~~~~~~~pd~vV~D~~~~~~~---~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~p~~~~~~~ 161 (358)
...+.+++++. ++|+||.|.+..... .+.+..+++.+.+--.. ..+. .|
T Consensus 58 -----~~~~~~~l~~~-------~~d~lIvD~Y~~~~~~~~~lk~~~~~~i~~iDD~~------~~~~----------~D 109 (282)
T 3hbm_A 58 -----IYELINLIKEE-------KFELLIIDHYGISVDDEKLIKLETGVKILSFDDEI------KPHH----------CD 109 (282)
T ss_dssp -----HHHHHHHHHHH-------TCSEEEEECTTCCHHHHHHHHHHHCCEEEEECSSC------CCCC----------CS
T ss_pred -----HHHHHHHHHhC-------CCCEEEEECCCCCHHHHHHHHHhcCcEEEEEecCC------Cccc----------CC
Confidence 12344556666 899999999887543 23333588888774321 0000 00
Q ss_pred ccccCCCC-CCcccCcccccCCCCCCCCCCCCCChhHHHHHhhc-CCCCceEEEEeccCCCCCHHHHHHHHHHHHhCCCc
Q 044624 162 EFLLLDFP-EASTIHPVLRFTGSKAGAGKEHGISAELCKNWLDR-KPCRSVLYVSFGSQDTIAVSQMVQLAMALEASGKN 239 (358)
Q Consensus 162 ~~~~p~~~-~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~wld~-~~~~~vvyvs~GS~~~~~~~~~~~~~~al~~~~~~ 239 (358)
-..-+.+. ....|...+|.... ...|.......++..+.-.. .+..+.|+|++|..... +....++++|.... +
T Consensus 110 llin~~~~~~~~~Y~~~~p~~~~-~l~G~~Y~~lR~eF~~~~~~~r~~~~~ILv~~GG~d~~--~l~~~vl~~L~~~~-~ 185 (282)
T 3hbm_A 110 ILLNVNAYAKASDYEGLVPFKCE-VRCGFSYALIREEFYQEAKENRKKKYDFFICMGGTDIK--NLSLQIASELPKTK-I 185 (282)
T ss_dssp EEEECSTTCCGGGGTTTCC-CCE-EEESGGGCCCCHHHHHHTTCCCCCCEEEEEECCSCCTT--CHHHHHHHHSCTTS-C
T ss_pred EEEeCCcccchhhccccCCCCCe-EeeCCcccccCHHHHHhhhhccccCCeEEEEECCCchh--hHHHHHHHHhhcCC-C
Confidence 00000000 00111111111000 00011112334443332111 12345799999975432 34556777776644 5
Q ss_pred EEEEecCCCCCC--------CCCC-----CCc---ccc---------cCCcchhhhhhcCcceEeccccccchhhhhhhh
Q 044624 240 FIWIVRPPIGFD--------INSE-----FRA---NDA---------DGTQSALEALSHGVPINGWPLAAEQFYNSNLLG 294 (358)
Q Consensus 240 ~lw~~~~~~~~~--------~~~~-----~~~---~wl---------gG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~ 294 (358)
+.++.+...... .... +.. ++. || +|+.|+++.|+|+|.+|...+|..||+.++
T Consensus 186 i~vv~G~~~~~~~~l~~~~~~~~~v~v~~~~~~m~~~m~~aDlvI~~gG-~T~~E~~~~g~P~i~ip~~~~Q~~nA~~l~ 264 (282)
T 3hbm_A 186 ISIATSSSNPNLKKLQKFAKLHNNIRLFIDHENIAKLMNESNKLIISAS-SLVNEALLLKANFKAICYVKNQESTATWLA 264 (282)
T ss_dssp EEEEECTTCTTHHHHHHHHHTCSSEEEEESCSCHHHHHHTEEEEEEESS-HHHHHHHHTTCCEEEECCSGGGHHHHHHHH
T ss_pred EEEEECCCchHHHHHHHHHhhCCCEEEEeCHHHHHHHHHHCCEEEECCc-HHHHHHHHcCCCEEEEeCCCCHHHHHHHHH
Confidence 666666543210 0000 111 111 77 899999999999999999999999999999
Q ss_pred ccccceEEecc
Q 044624 295 EEVGVCAEVAR 305 (358)
Q Consensus 295 ~~~G~G~~l~~ 305 (358)
+. |.++.+..
T Consensus 265 ~~-G~~~~~~~ 274 (282)
T 3hbm_A 265 KK-GYEVEYKY 274 (282)
T ss_dssp HT-TCEEECGG
T ss_pred HC-CCEEEcch
Confidence 98 99998864
No 24
>2jzc_A UDP-N-acetylglucosamine transferase subunit ALG13; rossmann-like fold, endoplasmic reticulum, glycosyltransferase, structural genomics; NMR {Saccharomyces cerevisiae} PDB: 2ks6_A
Probab=98.87 E-value=1.4e-09 Score=92.47 Aligned_cols=109 Identities=17% Similarity=0.106 Sum_probs=76.5
Q ss_pred CCCCceEEEEeccCCCCCHHHHHHH-----HHHHHhCC-CcEEEEecCCCC--CC---------------C---------
Q 044624 205 KPCRSVLYVSFGSQDTIAVSQMVQL-----AMALEASG-KNFIWIVRPPIG--FD---------------I--------- 252 (358)
Q Consensus 205 ~~~~~vvyvs~GS~~~~~~~~~~~~-----~~al~~~~-~~~lw~~~~~~~--~~---------------~--------- 252 (358)
.+++++|||+.||... -.+.+..+ +++|...+ .+++|.++.... .. .
T Consensus 25 ~~~~~~VlVtgGS~~~-~n~li~~vl~~~~l~~L~~~~~~~vv~q~G~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~ 103 (224)
T 2jzc_A 25 IIEEKALFVTCGATVP-FPKLVSCVLSDEFCQELIQYGFVRLIIQFGRNYSSEFEHLVQERGGQRESQKIPIDQFGCGDT 103 (224)
T ss_dssp CCCSCCEEEECCSCCS-CHHHHHHHTSHHHHHHHHTTTCCCEEECCCSSSCCCCCSHHHHHTCEECSCCCSSCTTCTTCS
T ss_pred CCCCCEEEEEcCCchH-HHHHHHHHHHHHHHHHHhcCCCeEEEEEECCCchhhHHHHHHhhhcccccccccccccccccc
Confidence 3456899999999732 23333333 48888877 788888875431 11 0
Q ss_pred --------CC------CCCc------c-cc------cCCcchhhhhhcCcceEecccc----ccchhhhhhhhccccceE
Q 044624 253 --------NS------EFRA------N-DA------DGTQSALEALSHGVPINGWPLA----AEQFYNSNLLGEEVGVCA 301 (358)
Q Consensus 253 --------~~------~~~~------~-wl------gG~~s~~eal~~GvP~l~~P~~----~DQ~~na~~v~~~~G~G~ 301 (358)
.. .+.. . +. ||.||++|++++|+|+|++|.- .||..||+++++. |+++
T Consensus 104 ~~~~~~~~~~~~v~v~~f~~~m~~~l~~~AdlvIshaGagTv~Eal~~G~P~IvVP~~~~~~~HQ~~nA~~l~~~-G~~~ 182 (224)
T 2jzc_A 104 ARQYVLMNGKLKVIGFDFSTKMQSIIRDYSDLVISHAGTGSILDSLRLNKPLIVCVNDSLMDNHQQQIADKFVEL-GYVW 182 (224)
T ss_dssp CEEEESTTTSSEEEECCSSSSHHHHHHHHCSCEEESSCHHHHHHHHHTTCCCCEECCSSCCCCHHHHHHHHHHHH-SCCC
T ss_pred ccccccccCCceEEEeeccchHHHHHHhcCCEEEECCcHHHHHHHHHhCCCEEEEcCcccccchHHHHHHHHHHC-CCEE
Confidence 00 0101 3 33 9999999999999999999974 3699999999988 9986
Q ss_pred EecccCCccccHHHHHHHHHHH
Q 044624 302 EVARGMNCAVLKEHIVVKIELV 323 (358)
Q Consensus 302 ~l~~~~~~~~~~~~l~~ai~~l 323 (358)
.+ +++.|+++|+++
T Consensus 183 ~~--------~~~~L~~~i~~l 196 (224)
T 2jzc_A 183 SC--------APTETGLIAGLR 196 (224)
T ss_dssp EE--------CSCTTTHHHHHH
T ss_pred Ec--------CHHHHHHHHHHH
Confidence 55 346677777777
No 25
>2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A*
Probab=98.45 E-value=0.0001 Score=67.98 Aligned_cols=68 Identities=15% Similarity=0.066 Sum_probs=47.4
Q ss_pred cCCcchhhhhhcCcceEeccccccchhhhhhhhccccceEEecccCCccccHHHHHHHHHHHhcCCCCCHHHHHHHHH
Q 044624 262 DGTQSALEALSHGVPINGWPLAAEQFYNSNLLGEEVGVCAEVARGMNCAVLKEHIVVKIELVMNETEKGKPMRMKDLE 339 (358)
Q Consensus 262 gG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~l~~ai~~ll~~~~~~~~~r~~a~~ 339 (358)
|.-++++||+++|+|+|+.+.. .+...+.+. +.|+.++. -+.++++++|.++++|++..+.+.+++++
T Consensus 296 ~~~~~~~EAma~G~PvI~~~~~----~~~e~v~~~-~~g~~~~~-----~d~~~la~~i~~l~~~~~~~~~~~~~~~~ 363 (394)
T 2jjm_A 296 SFGLVLLEAMACGVPCIGTRVG----GIPEVIQHG-DTGYLCEV-----GDTTGVADQAIQLLKDEELHRNMGERARE 363 (394)
T ss_dssp SCCHHHHHHHHTTCCEEEECCT----TSTTTCCBT-TTEEEECT-----TCHHHHHHHHHHHHHCHHHHHHHHHHHHH
T ss_pred CCchHHHHHHhcCCCEEEecCC----ChHHHhhcC-CceEEeCC-----CCHHHHHHHHHHHHcCHHHHHHHHHHHHH
Confidence 5567899999999999997643 333444433 57887764 46899999999999987222234444443
No 26
>3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A*
Probab=98.41 E-value=5.9e-05 Score=70.37 Aligned_cols=69 Identities=12% Similarity=-0.113 Sum_probs=51.2
Q ss_pred cCCcchhhhhhcCcceEeccccccchhhhhhhhccccceEEecccCCccccHHHHHHHHHHHhc-CCCCCHHHHHHHHHH
Q 044624 262 DGTQSALEALSHGVPINGWPLAAEQFYNSNLLGEEVGVCAEVARGMNCAVLKEHIVVKIELVMN-ETEKGKPMRMKDLEV 340 (358)
Q Consensus 262 gG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~l~~ai~~ll~-~~~~~~~~r~~a~~l 340 (358)
|--++++||+++|+|+|+-.. ..... +.+. |.|+.++. -+.++++++|.++++ |++..+.+.+++++.
T Consensus 342 ~~~~~~~EAma~G~Pvi~s~~----~~~~e-~~~~-~~g~~~~~-----~d~~~la~~i~~ll~~~~~~~~~~~~~~~~~ 410 (439)
T 3fro_A 342 PFGLVALEAMCLGAIPIASAV----GGLRD-IITN-ETGILVKA-----GDPGELANAILKALELSRSDLSKFRENCKKR 410 (439)
T ss_dssp SSCHHHHHHHHTTCEEEEESS----THHHH-HCCT-TTCEEECT-----TCHHHHHHHHHHHHHHTTTTTHHHHHHHHHH
T ss_pred CccHHHHHHHHCCCCeEEcCC----CCcce-eEEc-CceEEeCC-----CCHHHHHHHHHHHHhcCHHHHHHHHHHHHHH
Confidence 445789999999999999753 33333 3346 78888864 578999999999999 775566677776654
Q ss_pred H
Q 044624 341 K 341 (358)
Q Consensus 341 ~ 341 (358)
.
T Consensus 411 ~ 411 (439)
T 3fro_A 411 A 411 (439)
T ss_dssp H
T ss_pred H
Confidence 3
No 27
>3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A*
Probab=98.29 E-value=9.8e-05 Score=69.11 Aligned_cols=69 Identities=14% Similarity=0.024 Sum_probs=48.4
Q ss_pred cCCcchhhhhhcCcceEeccccccchhhhhhhhccccceEEecccCCccccHHHHHHHHHHHhcCCCCCHHHHHHHHHH
Q 044624 262 DGTQSALEALSHGVPINGWPLAAEQFYNSNLLGEEVGVCAEVARGMNCAVLKEHIVVKIELVMNETEKGKPMRMKDLEV 340 (358)
Q Consensus 262 gG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~l~~ai~~ll~~~~~~~~~r~~a~~l 340 (358)
|.-++++||+++|+|+|+.+. ......+.+. +.|+.++. -+.++++++|.++++|++..+.+.+++++.
T Consensus 337 ~~~~~~~Eama~G~PvI~~~~----~~~~e~i~~~-~~g~~~~~-----~d~~~la~~i~~l~~~~~~~~~~~~~~~~~ 405 (438)
T 3c48_A 337 SFGLVAMEAQASGTPVIAARV----GGLPIAVAEG-ETGLLVDG-----HSPHAWADALATLLDDDETRIRMGEDAVEH 405 (438)
T ss_dssp SSCHHHHHHHHTTCCEEEESC----TTHHHHSCBT-TTEEEESS-----CCHHHHHHHHHHHHHCHHHHHHHHHHHHHH
T ss_pred CCchHHHHHHHcCCCEEecCC----CChhHHhhCC-CcEEECCC-----CCHHHHHHHHHHHHcCHHHHHHHHHHHHHH
Confidence 445689999999999999754 3444555444 67888864 478999999999999872233344444443
No 28
>2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A*
Probab=97.84 E-value=0.00042 Score=63.86 Aligned_cols=54 Identities=11% Similarity=0.067 Sum_probs=42.1
Q ss_pred CcchhhhhhcCcceEeccccccchhhhhhhhccccceEEecccCCccccHHHHHHHHHHHhcCC
Q 044624 264 TQSALEALSHGVPINGWPLAAEQFYNSNLLGEEVGVCAEVARGMNCAVLKEHIVVKIELVMNET 327 (358)
Q Consensus 264 ~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~l~~ai~~ll~~~ 327 (358)
-++++||+++|+|+|+.+. ..+...+.+. +.|+.++. -+.+++.++|.++++|+
T Consensus 297 ~~~~~Ea~a~G~PvI~~~~----~~~~e~i~~~-~~g~~~~~-----~d~~~l~~~i~~l~~~~ 350 (406)
T 2gek_A 297 GIVLVEAMAAGTAVVASDL----DAFRRVLADG-DAGRLVPV-----DDADGMAAALIGILEDD 350 (406)
T ss_dssp CHHHHHHHHHTCEEEECCC----HHHHHHHTTT-TSSEECCT-----TCHHHHHHHHHHHHHCH
T ss_pred chHHHHHHHcCCCEEEecC----CcHHHHhcCC-CceEEeCC-----CCHHHHHHHHHHHHcCH
Confidence 4489999999999999765 4455555544 67777754 46899999999999987
No 29
>3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A*
Probab=97.81 E-value=0.00076 Score=61.79 Aligned_cols=66 Identities=12% Similarity=0.005 Sum_probs=45.5
Q ss_pred CCcchhhhhhcCcceEeccccccchhhhhhhhccccceEEecccCCccccHHHHHHHHHHHhcCCCCCHHHHHHHHH
Q 044624 263 GTQSALEALSHGVPINGWPLAAEQFYNSNLLGEEVGVCAEVARGMNCAVLKEHIVVKIELVMNETEKGKPMRMKDLE 339 (358)
Q Consensus 263 G~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~l~~ai~~ll~~~~~~~~~r~~a~~ 339 (358)
.-++++||+++|+|+|+.+.. .+.. +.+. |.|+.++. -+.+++.++|.++++|++..+.+.+++++
T Consensus 292 ~~~~~~Ea~a~G~PvI~~~~~----~~~e-~i~~-~~g~~~~~-----~d~~~l~~~i~~l~~~~~~~~~~~~~~~~ 357 (394)
T 3okp_A 292 LGIVYLEAQACGVPVIAGTSG----GAPE-TVTP-ATGLVVEG-----SDVDKLSELLIELLDDPIRRAAMGAAGRA 357 (394)
T ss_dssp SCHHHHHHHHTTCCEEECSST----TGGG-GCCT-TTEEECCT-----TCHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred cCcHHHHHHHcCCCEEEeCCC----ChHH-HHhc-CCceEeCC-----CCHHHHHHHHHHHHhCHHHHHHHHHHHHH
Confidence 345889999999999997642 2333 3345 67777764 46899999999999987223334444443
No 30
>3dzc_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, in diseases, isomerase, center for structural genomics of INFE diseases, csgid; 2.35A {Vibrio cholerae}
Probab=97.81 E-value=0.00016 Score=67.04 Aligned_cols=52 Identities=19% Similarity=0.145 Sum_probs=39.2
Q ss_pred cchhhhhhcCcceEeccccccchhhhhhhhccccceEEecccCCccccHHHHHHHHHHHhcCC
Q 044624 265 QSALEALSHGVPINGWPLAAEQFYNSNLLGEEVGVCAEVARGMNCAVLKEHIVVKIELVMNET 327 (358)
Q Consensus 265 ~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~l~~ai~~ll~~~ 327 (358)
|.+.||.++|+|+|+..-..+++ .+++. |.++.+. .++++|.+++.++++|+
T Consensus 317 g~~~EA~a~G~PvV~~~~~~~~~----e~v~~-G~~~lv~------~d~~~l~~ai~~ll~d~ 368 (396)
T 3dzc_A 317 GIQEEAPSLGKPVLVMRETTERP----EAVAA-GTVKLVG------TNQQQICDALSLLLTDP 368 (396)
T ss_dssp GGGTTGGGGTCCEEECCSSCSCH----HHHHH-TSEEECT------TCHHHHHHHHHHHHHCH
T ss_pred cHHHHHHHcCCCEEEccCCCcch----HHHHc-CceEEcC------CCHHHHHHHHHHHHcCH
Confidence 34469999999999976555553 24566 8775553 25899999999999988
No 31
>2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A*
Probab=97.77 E-value=0.0012 Score=61.31 Aligned_cols=66 Identities=18% Similarity=0.064 Sum_probs=46.5
Q ss_pred cCCcchhhhhhcCcceEeccccccchhhhhhhhccccceEEecccCCccccHHHHHHHHHHHhcCCCCCHHHHHHHHH
Q 044624 262 DGTQSALEALSHGVPINGWPLAAEQFYNSNLLGEEVGVCAEVARGMNCAVLKEHIVVKIELVMNETEKGKPMRMKDLE 339 (358)
Q Consensus 262 gG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~l~~ai~~ll~~~~~~~~~r~~a~~ 339 (358)
|.-++++||+++|+|+|+.+. ..+...+.+. +.|+.++ +.++++++|.++++|++..+.+.+++++
T Consensus 327 ~~~~~~lEAma~G~PvI~~~~----~g~~e~i~~~-~~g~l~~-------d~~~la~~i~~ll~~~~~~~~~~~~a~~ 392 (416)
T 2x6q_A 327 GFGLTVTEAMWKGKPVIGRAV----GGIKFQIVDG-ETGFLVR-------DANEAVEVVLYLLKHPEVSKEMGAKAKE 392 (416)
T ss_dssp SSCHHHHHHHHTTCCEEEESC----HHHHHHCCBT-TTEEEES-------SHHHHHHHHHHHHHCHHHHHHHHHHHHH
T ss_pred CCccHHHHHHHcCCCEEEccC----CCChhheecC-CCeEEEC-------CHHHHHHHHHHHHhCHHHHHHHHHHHHH
Confidence 556789999999999999764 3455555444 5677663 6899999999999988222234444443
No 32
>4hwg_A UDP-N-acetylglucosamine 2-epimerase; ssgcid, structural genomics, seattle structural genomics center for infectious disease, isomerase; 2.00A {Rickettsia bellii}
Probab=97.58 E-value=0.0021 Score=59.20 Aligned_cols=108 Identities=12% Similarity=0.076 Sum_probs=65.7
Q ss_pred CceEEEEeccCCCCC-HHHHHHHHHHHHhC----CCcEEEEecCCC-----CC---CCCCCC--C---ccc-----c---
Q 044624 208 RSVLYVSFGSQDTIA-VSQMVQLAMALEAS----GKNFIWIVRPPI-----GF---DINSEF--R---AND-----A--- 261 (358)
Q Consensus 208 ~~vvyvs~GS~~~~~-~~~~~~~~~al~~~----~~~~lw~~~~~~-----~~---~~~~~~--~---~~w-----l--- 261 (358)
++.++++.|...... ...+..+++++..+ +..+|+...+.. .. ...... . .++ +
T Consensus 203 ~~~iLvt~hr~e~~~~~~~l~~ll~al~~l~~~~~~~vv~p~~p~~~~~l~~~~~~~~~~~~v~l~~~lg~~~~~~l~~~ 282 (385)
T 4hwg_A 203 KQYFLISSHREENVDVKNNLKELLNSLQMLIKEYNFLIIFSTHPRTKKRLEDLEGFKELGDKIRFLPAFSFTDYVKLQMN 282 (385)
T ss_dssp TSEEEEEECCC-----CHHHHHHHHHHHHHHHHHCCEEEEEECHHHHHHHHTSGGGGGTGGGEEECCCCCHHHHHHHHHH
T ss_pred CCEEEEEeCCchhcCcHHHHHHHHHHHHHHHhcCCeEEEEECChHHHHHHHHHHHHhcCCCCEEEEcCCCHHHHHHHHHh
Confidence 568888888765433 24566777776653 567777654311 11 110111 0 011 1
Q ss_pred --------cCCcchhhhhhcCcceEeccccccchhhhhhhhccccceEEecccCCccccHHHHHHHHHHHhcCCC
Q 044624 262 --------DGTQSALEALSHGVPINGWPLAAEQFYNSNLLGEEVGVCAEVARGMNCAVLKEHIVVKIELVMNETE 328 (358)
Q Consensus 262 --------gG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~l~~ai~~ll~~~~ 328 (358)
|| .+.||.+.|+|+|+++...+-+. .++. |.++.+. .++++|.+++.++++|+.
T Consensus 283 adlvvt~SGg--v~~EA~alG~Pvv~~~~~ter~e----~v~~-G~~~lv~------~d~~~i~~ai~~ll~d~~ 344 (385)
T 4hwg_A 283 AFCILSDSGT--ITEEASILNLPALNIREAHERPE----GMDA-GTLIMSG------FKAERVLQAVKTITEEHD 344 (385)
T ss_dssp CSEEEECCTT--HHHHHHHTTCCEEECSSSCSCTH----HHHH-TCCEECC------SSHHHHHHHHHHHHTTCB
T ss_pred CcEEEECCcc--HHHHHHHcCCCEEEcCCCccchh----hhhc-CceEEcC------CCHHHHHHHHHHHHhChH
Confidence 44 36899999999999986544222 2456 8776653 368999999999999873
No 33
>2xci_A KDO-transferase, 3-deoxy-D-manno-2-octulosonic acid transferase; KDTA, GSEA, glycosyltransferase superfamily B,; HET: PG4; 2.00A {Aquifex aeolicus} PDB: 2xcu_A*
Probab=97.21 E-value=0.00064 Score=62.49 Aligned_cols=77 Identities=22% Similarity=0.260 Sum_probs=60.0
Q ss_pred CCcchhhhhhcCcceEeccccccchhhhhhhhccccceEEecccCCccccHHHHHHHHHHHhcCCCCCHHHHHHHHHHHH
Q 044624 263 GTQSALEALSHGVPINGWPLAAEQFYNSNLLGEEVGVCAEVARGMNCAVLKEHIVVKIELVMNETEKGKPMRMKDLEVKE 342 (358)
Q Consensus 263 G~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~l~~ai~~ll~~~~~~~~~r~~a~~l~~ 342 (358)
|.++++||+++|+|+|+-|..++.......+.+. |.++.++ +.++++++|.++++| +..+.|.+++++..+
T Consensus 291 gg~~~lEAmA~G~PVI~~~~~~~~~e~~~~~~~~-G~l~~~~-------d~~~La~ai~~ll~d-~~r~~mg~~ar~~~~ 361 (374)
T 2xci_A 291 GGHNLLEPTCWGIPVIYGPYTHKVNDLKEFLEKE-GAGFEVK-------NETELVTKLTELLSV-KKEIKVEEKSREIKG 361 (374)
T ss_dssp CCCCCHHHHTTTCCEEECSCCTTSHHHHHHHHHT-TCEEECC-------SHHHHHHHHHHHHHS-CCCCCHHHHHHHHHH
T ss_pred CCcCHHHHHHhCCCEEECCCccChHHHHHHHHHC-CCEEEeC-------CHHHHHHHHHHHHhH-HHHHHHHHHHHHHHH
Confidence 4478999999999999877777777766665555 7766553 478999999999998 677789999988776
Q ss_pred HHHHhh
Q 044624 343 IIDNAF 348 (358)
Q Consensus 343 ~~~~a~ 348 (358)
.-..+.
T Consensus 362 ~~~ga~ 367 (374)
T 2xci_A 362 CYLEKL 367 (374)
T ss_dssp HHHHHH
T ss_pred hcccHH
Confidence 654443
No 34
>2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8
Probab=96.73 E-value=0.0017 Score=52.67 Aligned_cols=66 Identities=14% Similarity=0.053 Sum_probs=46.9
Q ss_pred cCCcchhhhhhcCcceEeccccccchhhhhhhhccccceEEecccCCccccHHHHHHHHHHHhcCCCCCHHHHHHHHHHH
Q 044624 262 DGTQSALEALSHGVPINGWPLAAEQFYNSNLLGEEVGVCAEVARGMNCAVLKEHIVVKIELVMNETEKGKPMRMKDLEVK 341 (358)
Q Consensus 262 gG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~l~~ai~~ll~~~~~~~~~r~~a~~l~ 341 (358)
|.-++++||+++|+|+|+... ..+...+.+. +.|+.+ . -+.++++++|.++++|++ .+++++++.+
T Consensus 109 ~~~~~~~Eama~G~PvI~~~~----~~~~e~i~~~-~~g~~~-~-----~d~~~l~~~i~~l~~~~~---~~~~~~~~~a 174 (177)
T 2f9f_A 109 DFGLTPIEAMASGKPVIAVNE----GGFKETVINE-KTGYLV-N-----ADVNEIIDAMKKVSKNPD---KFKKDCFRRA 174 (177)
T ss_dssp CSCHHHHHHHHTTCCEEEESS----HHHHHHCCBT-TTEEEE-C-----SCHHHHHHHHHHHHHCTT---TTHHHHHHHH
T ss_pred CCChHHHHHHHcCCcEEEeCC----CCHHHHhcCC-CccEEe-C-----CCHHHHHHHHHHHHhCHH---HHHHHHHHHH
Confidence 333589999999999999753 4555555544 678777 4 468999999999999882 2255554443
No 35
>1vgv_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, isomerase; HET: UD1; 2.31A {Escherichia coli} SCOP: c.87.1.3 PDB: 1f6d_A*
Probab=96.68 E-value=0.0031 Score=57.58 Aligned_cols=79 Identities=18% Similarity=0.103 Sum_probs=51.8
Q ss_pred cchhhhhhcCcceEeccccccchhhhhhhhccccceEEecccCCccccHHHHHHHHHHHhcCCCCCHHHHH---------
Q 044624 265 QSALEALSHGVPINGWPLAAEQFYNSNLLGEEVGVCAEVARGMNCAVLKEHIVVKIELVMNETEKGKPMRM--------- 335 (358)
Q Consensus 265 ~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~l~~ai~~ll~~~~~~~~~r~--------- 335 (358)
+.++||+++|+|+|+.+..++.. .+++. |.|+.++ . ++++++++|.++++|++..+++.+
T Consensus 292 ~~~lEA~a~G~PvI~~~~~~~~~----e~v~~-g~g~lv~-----~-d~~~la~~i~~ll~d~~~~~~~~~~~~~~~~~~ 360 (384)
T 1vgv_A 292 GIQEEAPSLGKPVLVMRDTTERP----EAVTA-GTVRLVG-----T-DKQRIVEEVTRLLKDENEYQAMSRAHNPYGDGQ 360 (384)
T ss_dssp TGGGTGGGGTCCEEEESSCCSCH----HHHHH-TSEEEEC-----S-SHHHHHHHHHHHHHCHHHHHHHHSSCCTTCCSC
T ss_pred chHHHHHHcCCCEEEccCCCCcc----hhhhC-CceEEeC-----C-CHHHHHHHHHHHHhChHHHhhhhhccCCCcCCC
Confidence 34889999999999998755443 34566 8888775 2 789999999999998721112222
Q ss_pred HHHHHHHHHHHhhcc-Cccc
Q 044624 336 KDLEVKEIIDNAFRN-DENL 354 (358)
Q Consensus 336 ~a~~l~~~~~~a~~~-gss~ 354 (358)
.++++.+.+.+...+ ||++
T Consensus 361 ~~~~i~~~~~~~~~~~~~~~ 380 (384)
T 1vgv_A 361 ACSRILEALKNNRISLGSHH 380 (384)
T ss_dssp HHHHHHHHHHHTCCCC----
T ss_pred HHHHHHHHHHHHHHhhcccc
Confidence 234555666666666 6654
No 36
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=96.40 E-value=0.0084 Score=59.93 Aligned_cols=75 Identities=20% Similarity=0.387 Sum_probs=55.8
Q ss_pred CCceEEEEeccCCCCCHHHHHHHHHHHHhCCCcEEEEecCCCC-------------CCC-CCCC---Cc--ccc------
Q 044624 207 CRSVLYVSFGSQDTIAVSQMVQLAMALEASGKNFIWIVRPPIG-------------FDI-NSEF---RA--NDA------ 261 (358)
Q Consensus 207 ~~~vvyvs~GS~~~~~~~~~~~~~~al~~~~~~~lw~~~~~~~-------------~~~-~~~~---~~--~wl------ 261 (358)
...++|.||-+..-++++.+...++-|++.+...+|.++.+.. ... +..+ .. +++
T Consensus 521 ~~~v~f~~fN~~~Ki~p~~~~~W~~IL~~vP~S~L~Ll~~~~~~~~~l~~~~~~~gi~~~r~~f~~~~~~~~~l~~~~~~ 600 (723)
T 4gyw_A 521 EDAIVYCNFNQLYKIDPSTLQMWANILKRVPNSVLWLLRFPAVGEPNIQQYAQNMGLPQNRIIFSPVAPKEEHVRRGQLA 600 (723)
T ss_dssp TTSEEEECCSCGGGCCHHHHHHHHHHHHHCSSEEEEEEETTGGGHHHHHHHHHHTTCCGGGEEEEECCCHHHHHHHGGGC
T ss_pred CCCEEEEeCCccccCCHHHHHHHHHHHHhCCCCeEEEEeCcHHHHHHHHHHHHhcCCCcCeEEECCCCCHHHHHHHhCCC
Confidence 3458888888888889999999999999999999999875431 100 0000 00 111
Q ss_pred ---------cCCcchhhhhhcCcceEecc
Q 044624 262 ---------DGTQSALEALSHGVPINGWP 281 (358)
Q Consensus 262 ---------gG~~s~~eal~~GvP~l~~P 281 (358)
+|.+|++|||.+|||+|.+|
T Consensus 601 Di~LDt~p~~g~tT~~eal~~GvPvvt~~ 629 (723)
T 4gyw_A 601 DVCLDTPLCNGHTTGMDVLWAGTPMVTMP 629 (723)
T ss_dssp SEEECCSSSCCSHHHHHHHHTTCCEEBCC
T ss_pred eEEeCCCCcCCHHHHHHHHHcCCCEEEcc
Confidence 99999999999999999998
No 37
>2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A*
Probab=96.22 E-value=0.0042 Score=56.38 Aligned_cols=72 Identities=10% Similarity=0.132 Sum_probs=51.9
Q ss_pred cCCcchhhhhhcCcceEeccccccchhhhhhhhccccceEEecccCCccccHHHHHHHHHHHhcCCCCCHHHHHHHHHHH
Q 044624 262 DGTQSALEALSHGVPINGWPLAAEQFYNSNLLGEEVGVCAEVARGMNCAVLKEHIVVKIELVMNETEKGKPMRMKDLEVK 341 (358)
Q Consensus 262 gG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~l~~ai~~ll~~~~~~~~~r~~a~~l~ 341 (358)
|.-++++||+++|+|+|+... ..+...+.+. +.|+.+.. .-+.++++++|.++++|++..+.+.+++++..
T Consensus 282 ~~~~~~~Ea~a~G~Pvi~~~~----~~~~e~i~~~-~~g~~~~~----~~~~~~l~~~i~~l~~~~~~~~~~~~~~~~~~ 352 (374)
T 2iw1_A 282 AAGIVLLEAITAGLPVLTTAV----CGYAHYIADA-NCGTVIAE----PFSQEQLNEVLRKALTQSPLRMAWAENARHYA 352 (374)
T ss_dssp SSCHHHHHHHHHTCCEEEETT----STTTHHHHHH-TCEEEECS----SCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHH
T ss_pred CcccHHHHHHHCCCCEEEecC----CCchhhhccC-CceEEeCC----CCCHHHHHHHHHHHHcChHHHHHHHHHHHHHH
Confidence 666789999999999999765 3455566655 78888851 35789999999999998722334445555444
Q ss_pred H
Q 044624 342 E 342 (358)
Q Consensus 342 ~ 342 (358)
+
T Consensus 353 ~ 353 (374)
T 2iw1_A 353 D 353 (374)
T ss_dssp H
T ss_pred H
Confidence 3
No 38
>2bfw_A GLGA glycogen synthase; glycosyltransferase family 5 UDP/ADP-glucose-glycogen syntha rossman folds, transferase; 1.8A {Pyrococcus abyssi} SCOP: c.87.1.8
Probab=96.10 E-value=0.0064 Score=49.95 Aligned_cols=55 Identities=13% Similarity=-0.065 Sum_probs=42.3
Q ss_pred cCCcchhhhhhcCcceEeccccccchhhhhhhhccccceEEecccCCccccHHHHHHHHHHHhc-CC
Q 044624 262 DGTQSALEALSHGVPINGWPLAAEQFYNSNLLGEEVGVCAEVARGMNCAVLKEHIVVKIELVMN-ET 327 (358)
Q Consensus 262 gG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~l~~ai~~ll~-~~ 327 (358)
|.-++++||+++|+|+|+... ..+...+ +. +.|+.++. -+.+++.++|.++++ |+
T Consensus 127 ~~~~~~~Ea~a~G~PvI~~~~----~~~~e~~-~~-~~g~~~~~-----~~~~~l~~~i~~l~~~~~ 182 (200)
T 2bfw_A 127 PFGLVALEAMCLGAIPIASAV----GGLRDII-TN-ETGILVKA-----GDPGELANAILKALELSR 182 (200)
T ss_dssp SSCHHHHHHHHTTCEEEEESC----HHHHHHC-CT-TTCEEECT-----TCHHHHHHHHHHHHHCCH
T ss_pred CccHHHHHHHHCCCCEEEeCC----CChHHHc-CC-CceEEecC-----CCHHHHHHHHHHHHhcCH
Confidence 445688999999999998754 3444445 44 67887764 478999999999999 88
No 39
>3q3e_A HMW1C-like glycosyltransferase; N-glycosylation; 2.10A {Actinobacillus pleuropneumoniae serovaorganism_taxid} PDB: 3q3h_A* 3q3i_A
Probab=95.96 E-value=0.016 Score=56.20 Aligned_cols=110 Identities=8% Similarity=0.006 Sum_probs=67.6
Q ss_pred ceEEEEeccCCCCCHHHHHHHHHHHHhCCCcEEEEe--cCCCCC-------------CCCC---CCCc--ccc-------
Q 044624 209 SVLYVSFGSQDTIAVSQMVQLAMALEASGKNFIWIV--RPPIGF-------------DINS---EFRA--NDA------- 261 (358)
Q Consensus 209 ~vvyvs~GS~~~~~~~~~~~~~~al~~~~~~~lw~~--~~~~~~-------------~~~~---~~~~--~wl------- 261 (358)
.++|.||++..-..++.++.+++-+++.+..++|.. +...+. .++. +... +++
T Consensus 441 ~v~Fg~fn~~~Ki~p~~l~~WarIL~~vP~s~L~l~~~g~~~g~~~~~~~~~~~~GI~~Rv~F~g~~p~~e~la~y~~aD 520 (631)
T 3q3e_A 441 VVNIGIASTTMKLNPYFLEALKAIRDRAKVKVHFHFALGQSNGITHPYVERFIKSYLGDSATAHPHSPYHQYLRILHNCD 520 (631)
T ss_dssp EEEEEEEECSTTCCHHHHHHHHHHHHHCSSEEEEEEEESSCCGGGHHHHHHHHHHHHGGGEEEECCCCHHHHHHHHHTCS
T ss_pred eEEEEECCccccCCHHHHHHHHHHHHhCCCcEEEEEecCCCchhhHHHHHHHHHcCCCccEEEcCCCCHHHHHHHHhcCc
Confidence 588888888877788888888888888777777743 322111 0000 0000 111
Q ss_pred --------cCCcchhhhhhcCcceEeccccccchh---hhhhhhccccceEE-ecccCCccccHHHHHHHHHHHhcCC
Q 044624 262 --------DGTQSALEALSHGVPINGWPLAAEQFY---NSNLLGEEVGVCAE-VARGMNCAVLKEHIVVKIELVMNET 327 (358)
Q Consensus 262 --------gG~~s~~eal~~GvP~l~~P~~~DQ~~---na~~v~~~~G~G~~-l~~~~~~~~~~~~l~~ai~~ll~~~ 327 (358)
+|..|++||+++|||+|+++ ++++. -+..+... |+.-. +. -+.++..+...++.+|+
T Consensus 521 IfLDpfpy~GgtTtlEALwmGVPVVTl~--G~~~asRvgaSlL~~~-GLpE~LIA------~d~eeYv~~Av~La~D~ 589 (631)
T 3q3e_A 521 MMVNPFPFGNTNGIIDMVTLGLVGVCKT--GAEVHEHIDEGLFKRL-GLPEWLIA------NTVDEYVERAVRLAENH 589 (631)
T ss_dssp EEECCSSSCCSHHHHHHHHTTCCEEEEC--CSSHHHHHHHHHHHHT-TCCGGGEE------SSHHHHHHHHHHHHHCH
T ss_pred EEEeCCcccCChHHHHHHHcCCCEEecc--CCcHHHHhHHHHHHhc-CCCcceec------CCHHHHHHHHHHHhCCH
Confidence 88899999999999999987 33221 11112212 43211 21 35677777777888888
No 40
>1v4v_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, two domains, homodimer, riken structural genomics/proteomics initiative, RSGI; HET: MSE; 1.80A {Thermus thermophilus} SCOP: c.87.1.3
Probab=95.91 E-value=0.007 Score=55.12 Aligned_cols=50 Identities=14% Similarity=0.096 Sum_probs=41.0
Q ss_pred hhhhhhcCcceEeccccccchhhhhhhhccccceEEecccCCccccHHHHHHHHHHHhcCC
Q 044624 267 ALEALSHGVPINGWPLAAEQFYNSNLLGEEVGVCAEVARGMNCAVLKEHIVVKIELVMNET 327 (358)
Q Consensus 267 ~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~l~~ai~~ll~~~ 327 (358)
++||+++|+|+|+.+..+++... ++. |.|+.+. .++++++++|.++++|+
T Consensus 286 ~lEA~a~G~PvI~~~~~~~~~~~----~~~-g~g~lv~------~d~~~la~~i~~ll~d~ 335 (376)
T 1v4v_A 286 QEEGAALGVPVVVLRNVTERPEG----LKA-GILKLAG------TDPEGVYRVVKGLLENP 335 (376)
T ss_dssp HHHHHHTTCCEEECSSSCSCHHH----HHH-TSEEECC------SCHHHHHHHHHHHHTCH
T ss_pred HHHHHHcCCCEEeccCCCcchhh----hcC-CceEECC------CCHHHHHHHHHHHHhCh
Confidence 55999999999999877777663 456 7887663 37899999999999987
No 41
>3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori}
Probab=95.62 E-value=0.017 Score=45.70 Aligned_cols=69 Identities=14% Similarity=0.129 Sum_probs=42.3
Q ss_pred cCCcchhhhhhcCc-ceEeccccccchhhhhhhhccccceEEecccCCccccHHHHHHHHHHHhcCCCCCHHHHHHHHHH
Q 044624 262 DGTQSALEALSHGV-PINGWPLAAEQFYNSNLLGEEVGVCAEVARGMNCAVLKEHIVVKIELVMNETEKGKPMRMKDLEV 340 (358)
Q Consensus 262 gG~~s~~eal~~Gv-P~l~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~l~~ai~~ll~~~~~~~~~r~~a~~l 340 (358)
|.-++++||+++|+ |+|+.... ......+.+. +. .+. .-+.+++.++|.++++|++..+.+.+++++.
T Consensus 86 ~~~~~~~Eama~G~vPvi~~~~~---~~~~~~~~~~-~~--~~~-----~~~~~~l~~~i~~l~~~~~~~~~~~~~~~~~ 154 (166)
T 3qhp_A 86 SEAIACLEAISVGIVPVIANSPL---SATRQFALDE-RS--LFE-----PNNAKDLSAKIDWWLENKLERERMQNEYAKS 154 (166)
T ss_dssp CCCHHHHHHHHTTCCEEEECCTT---CGGGGGCSSG-GG--EEC-----TTCHHHHHHHHHHHHHCHHHHHHHHHHHHHH
T ss_pred CccHHHHHHHhcCCCcEEeeCCC---CchhhhccCC-ce--EEc-----CCCHHHHHHHHHHHHhCHHHHHHHHHHHHHH
Confidence 44469999999996 99994322 2222223222 33 333 2478999999999999882233344444443
Q ss_pred H
Q 044624 341 K 341 (358)
Q Consensus 341 ~ 341 (358)
.
T Consensus 155 ~ 155 (166)
T 3qhp_A 155 A 155 (166)
T ss_dssp H
T ss_pred H
Confidence 3
No 42
>3ot5_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta; HET: PGE; 2.20A {Listeria monocytogenes}
Probab=95.18 E-value=0.022 Score=52.77 Aligned_cols=55 Identities=18% Similarity=0.126 Sum_probs=43.1
Q ss_pred cCCcch-hhhhhcCcceEeccccccchhhhhhhhccccceEEecccCCccccHHHHHHHHHHHhcCC
Q 044624 262 DGTQSA-LEALSHGVPINGWPLAAEQFYNSNLLGEEVGVCAEVARGMNCAVLKEHIVVKIELVMNET 327 (358)
Q Consensus 262 gG~~s~-~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~l~~ai~~ll~~~ 327 (358)
+..|++ .||.++|+|+|+.|-.++++. +++. |.|+.+. .++++|.+++.++++|+
T Consensus 307 ~~SGg~~~EA~a~g~PvV~~~~~~~~~e----~v~~-g~~~lv~------~d~~~l~~ai~~ll~~~ 362 (403)
T 3ot5_A 307 TDSGGVQEEAPGMGVPVLVLRDTTERPE----GIEA-GTLKLIG------TNKENLIKEALDLLDNK 362 (403)
T ss_dssp ECCHHHHHHGGGTTCCEEECCSSCSCHH----HHHH-TSEEECC------SCHHHHHHHHHHHHHCH
T ss_pred ECCccHHHHHHHhCCCEEEecCCCcchh----heeC-CcEEEcC------CCHHHHHHHHHHHHcCH
Confidence 444555 599999999999987777665 2456 8776664 27899999999999988
No 43
>2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A*
Probab=94.47 E-value=0.051 Score=51.46 Aligned_cols=56 Identities=14% Similarity=-0.008 Sum_probs=42.1
Q ss_pred cCCcchhhhhhcCcceEeccccccchhhhhhhhccccceEEecccCCccccHHHHHHHHHHHhcCC
Q 044624 262 DGTQSALEALSHGVPINGWPLAAEQFYNSNLLGEEVGVCAEVARGMNCAVLKEHIVVKIELVMNET 327 (358)
Q Consensus 262 gG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~l~~ai~~ll~~~ 327 (358)
|--++++||+++|+|+|+... ......+.+. ..|+.++. -+.++++++|.++++|+
T Consensus 370 g~~~~~lEAma~G~PvI~s~~----~g~~e~v~~~-~~g~l~~~-----~d~~~la~~i~~ll~~~ 425 (499)
T 2r60_A 370 PFGLAPVEAMASGLPAVVTRN----GGPAEILDGG-KYGVLVDP-----EDPEDIARGLLKAFESE 425 (499)
T ss_dssp CCCSHHHHHHHTTCCEEEESS----BHHHHHTGGG-TSSEEECT-----TCHHHHHHHHHHHHSCH
T ss_pred CCCcHHHHHHHcCCCEEEecC----CCHHHHhcCC-ceEEEeCC-----CCHHHHHHHHHHHHhCH
Confidence 334688999999999999753 3344444433 47888864 56899999999999987
No 44
>3rhz_A GTF3, nucleotide sugar synthetase-like protein; glycosyltransferase, transferase; HET: UDP; 1.90A {Streptococcus parasanguinis} PDB: 3qkw_A*
Probab=94.07 E-value=0.039 Score=49.73 Aligned_cols=68 Identities=16% Similarity=0.148 Sum_probs=51.7
Q ss_pred cchhhhhhcCcceEeccccccchhhhhhhhccccceEEecccCCccccHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHH
Q 044624 265 QSALEALSHGVPINGWPLAAEQFYNSNLLGEEVGVCAEVARGMNCAVLKEHIVVKIELVMNETEKGKPMRMKDLEVKEII 344 (358)
Q Consensus 265 ~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~l~~ai~~ll~~~~~~~~~r~~a~~l~~~~ 344 (358)
+-+.|++++|+|+|+.+ ...++..+.+. |+|+.++. .+++.+++.++.. + +.+.|++|+++.++.+
T Consensus 255 ~Kl~eymA~G~PVI~~~----~~~~~~~v~~~-~~G~~~~~-------~~e~~~~i~~l~~-~-~~~~m~~na~~~a~~~ 320 (339)
T 3rhz_A 255 YKLGSFLAAGIPVIVQE----GIANQELIENN-GLGWIVKD-------VEEAIMKVKNVNE-D-EYIELVKNVRSFNPIL 320 (339)
T ss_dssp HHHHHHHHHTCCEEEET----TCTTTHHHHHH-TCEEEESS-------HHHHHHHHHHCCH-H-HHHHHHHHHHHHTHHH
T ss_pred HHHHHHHHcCCCEEEcc----ChhHHHHHHhC-CeEEEeCC-------HHHHHHHHHHhCH-H-HHHHHHHHHHHHHHHh
Confidence 34789999999999865 45677778777 99998852 5788888888643 3 4557888998887776
Q ss_pred HH
Q 044624 345 DN 346 (358)
Q Consensus 345 ~~ 346 (358)
+.
T Consensus 321 ~~ 322 (339)
T 3rhz_A 321 RK 322 (339)
T ss_dssp HT
T ss_pred hc
Confidence 64
No 45
>3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A
Probab=93.81 E-value=0.051 Score=49.12 Aligned_cols=52 Identities=21% Similarity=0.112 Sum_probs=40.2
Q ss_pred cchhhhhhcCcceEeccccccchhhhhhhhccccceEEecccCCccccHHHHHHHHHHHhcCC
Q 044624 265 QSALEALSHGVPINGWPLAAEQFYNSNLLGEEVGVCAEVARGMNCAVLKEHIVVKIELVMNET 327 (358)
Q Consensus 265 ~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~l~~ai~~ll~~~ 327 (358)
+.++||+++|+|+|+....+.. ..+.+. |.|+.++ . ++++++++|.++++|+
T Consensus 292 ~~~lEA~a~G~Pvi~~~~~~~~----~e~v~~-g~g~~v~-----~-d~~~la~~i~~ll~~~ 343 (375)
T 3beo_A 292 GVQEEAPSLGVPVLVLRDTTER----PEGIEA-GTLKLAG-----T-DEETIFSLADELLSDK 343 (375)
T ss_dssp HHHHHHHHHTCCEEECSSCCSC----HHHHHT-TSEEECC-----S-CHHHHHHHHHHHHHCH
T ss_pred ChHHHHHhcCCCEEEecCCCCC----ceeecC-CceEEcC-----C-CHHHHHHHHHHHHhCh
Confidence 3488999999999998654443 234556 8787764 2 7899999999999988
No 46
>3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A*
Probab=92.09 E-value=0.18 Score=46.24 Aligned_cols=54 Identities=7% Similarity=-0.002 Sum_probs=38.1
Q ss_pred cCCcchhhhhhcCcceEeccccccchhhhhhhhccccc----------------eE--EecccCCccccHHHHHHHHHHH
Q 044624 262 DGTQSALEALSHGVPINGWPLAAEQFYNSNLLGEEVGV----------------CA--EVARGMNCAVLKEHIVVKIELV 323 (358)
Q Consensus 262 gG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~----------------G~--~l~~~~~~~~~~~~l~~ai~~l 323 (358)
|.-++++||+++|+|+|+.... .+...+ +. |. |+ .+.. -+.++++++| ++
T Consensus 285 ~~~~~~lEAma~G~PvI~s~~~----g~~e~v-~~-~~~~~i~~~~~~~~~~~~G~~gl~~~-----~d~~~la~~i-~l 352 (413)
T 3oy2_A 285 GFGLCSAEGAVLGKPLIISAVG----GADDYF-SG-DCVYKIKPSAWISVDDRDGIGGIEGI-----IDVDDLVEAF-TF 352 (413)
T ss_dssp SSCHHHHHHHTTTCCEEEECCH----HHHHHS-CT-TTSEEECCCEEEECTTTCSSCCEEEE-----CCHHHHHHHH-HH
T ss_pred CCCcHHHHHHHcCCCEEEcCCC----ChHHHH-cc-CcccccccccccccccccCcceeeCC-----CCHHHHHHHH-HH
Confidence 5556899999999999996542 233333 22 32 44 4443 4789999999 99
Q ss_pred hcCC
Q 044624 324 MNET 327 (358)
Q Consensus 324 l~~~ 327 (358)
++|+
T Consensus 353 ~~~~ 356 (413)
T 3oy2_A 353 FKDE 356 (413)
T ss_dssp TTSH
T ss_pred hcCH
Confidence 9987
No 47
>2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A*
Probab=92.00 E-value=0.12 Score=47.91 Aligned_cols=57 Identities=14% Similarity=0.050 Sum_probs=39.1
Q ss_pred cchhhhhhcCcceEeccccccchhhhhhhhccccceEEecccCCccccHHHHHHHHHHHhcCCCCCHHHHHH
Q 044624 265 QSALEALSHGVPINGWPLAAEQFYNSNLLGEEVGVCAEVARGMNCAVLKEHIVVKIELVMNETEKGKPMRMK 336 (358)
Q Consensus 265 ~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~l~~ai~~ll~~~~~~~~~r~~ 336 (358)
++++||+++|+|+|+ -..+ ....+.+. ..|+.++. -++++++++|.++++|+ ..+++
T Consensus 329 ~~~lEAmA~G~PVV~-~~~g----~~e~v~~~-~~G~lv~~-----~d~~~la~ai~~ll~~~----~~~~~ 385 (413)
T 2x0d_A 329 YPPLEMAHFGLRVIT-NKYE----NKDLSNWH-SNIVSLEQ-----LNPENIAETLVELCMSF----NNRDV 385 (413)
T ss_dssp SHHHHHHHTTCEEEE-ECBT----TBCGGGTB-TTEEEESS-----CSHHHHHHHHHHHHHHT----C----
T ss_pred cHHHHHHhCCCcEEE-eCCC----cchhhhcC-CCEEEeCC-----CCHHHHHHHHHHHHcCH----HHHHH
Confidence 567999999999998 3322 22333333 46887764 57899999999999998 55554
No 48
>2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A*
Probab=91.91 E-value=0.28 Score=46.31 Aligned_cols=112 Identities=8% Similarity=0.077 Sum_probs=61.2
Q ss_pred CCcChHHHHHHHHHHHhCCCcEEEEEeCCcchh---h----hhhcCCCCCCeEEEeccCCccCCCCCCCCCCCCCCCchH
Q 044624 6 AQGHVIPFLALAHHLESTKNYTIAFVNTHLNIK---K----IKSSLPQSSPIHFLETPFNIIDHDLPPCTENTDSHPFDV 78 (358)
Q Consensus 6 ~~GH~~P~l~La~~L~~~rGh~Vt~~t~~~~~~---~----~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 78 (358)
..|.-..+..|+++|++ +||+|++++...... . +.. .....++++..++.. ......... ....
T Consensus 32 ~GG~~~~~~~la~~L~~-~G~~V~v~~~~~~~~~~~~~~~~~~~-~~~~~gv~v~~~~~~------~~~~~~~~~-~~~~ 102 (499)
T 2r60_A 32 FGGQLVYVKEVSLALAE-MGVQVDIITRRIKDENWPEFSGEIDY-YQETNKVRIVRIPFG------GDKFLPKEE-LWPY 102 (499)
T ss_dssp BSHHHHHHHHHHHHHHH-TTCEEEEEEECCCBTTBGGGCCSEEE-CTTCSSEEEEEECCS------CSSCCCGGG-CGGG
T ss_pred CCCeeehHHHHHHHHHh-cCCeEEEEeCCCCcccccchhhhHHh-ccCCCCeEEEEecCC------CcCCcCHHH-HHHH
Confidence 35677889999999999 999999998753321 1 111 000157888776632 100000000 0000
Q ss_pred HHHHHHHHhhchHHHHHHHHHHhhhcCCCCCcEEEECCCCcc--HHHHHHHhCCceEEEcch
Q 044624 79 VRKLLEATLSFKPHFKKLIIDLIDEQNGHKPLCIITDMFFGW--CKEIAQEYGIFHAIFIEG 138 (358)
Q Consensus 79 ~~~~~~~~~~~~~~l~~ll~~~~~~~~~~~pd~vV~D~~~~~--~~~~A~~lgiP~v~~~~~ 138 (358)
. ......+..+++... . +||+|.+...... +..++..+|+|+|.....
T Consensus 103 ~-------~~~~~~l~~~l~~~~----~-~~Divh~~~~~~~~~~~~~~~~~~~p~v~~~H~ 152 (499)
T 2r60_A 103 L-------HEYVNKIINFYREEG----K-FPQVVTTHYGDGGLAGVLLKNIKGLPFTFTGHS 152 (499)
T ss_dssp H-------HHHHHHHHHHHHHHT----C-CCSEEEEEHHHHHHHHHHHHHHHCCCEEEECSS
T ss_pred H-------HHHHHHHHHHHHhcC----C-CCCEEEEcCCcchHHHHHHHHhcCCcEEEEccC
Confidence 0 111123445555420 1 7999988764322 234677889999876544
No 49
>3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A*
Probab=91.54 E-value=0.21 Score=50.31 Aligned_cols=56 Identities=7% Similarity=0.016 Sum_probs=41.3
Q ss_pred cCCcchhhhhhcCcceEeccccccchhhhhhhhccccceEEecccCCccccHHHHHHHHHHHh----cCC
Q 044624 262 DGTQSALEALSHGVPINGWPLAAEQFYNSNLLGEEVGVCAEVARGMNCAVLKEHIVVKIELVM----NET 327 (358)
Q Consensus 262 gG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~l~~ai~~ll----~~~ 327 (358)
|--.+++||+++|+|+|+- |.......+.+. +.|+.++. -+.++++++|.+++ .|+
T Consensus 676 gfglvllEAMA~G~PVIas----d~GG~~EiV~dg-~~Gllv~p-----~D~e~LA~aI~~lL~~Ll~d~ 735 (816)
T 3s28_A 676 AFGLTVVEAMTCGLPTFAT----CKGGPAEIIVHG-KSGFHIDP-----YHGDQAADTLADFFTKCKEDP 735 (816)
T ss_dssp SSCHHHHHHHHTTCCEEEE----SSBTHHHHCCBT-TTBEEECT-----TSHHHHHHHHHHHHHHHHHCT
T ss_pred CccHHHHHHHHcCCCEEEe----CCCChHHHHccC-CcEEEeCC-----CCHHHHHHHHHHHHHHhccCH
Confidence 4446899999999999996 444455555444 67888875 46788888887666 788
No 50
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=91.24 E-value=0.2 Score=48.10 Aligned_cols=57 Identities=19% Similarity=0.163 Sum_probs=38.6
Q ss_pred cCCcchhhhhhcCcceEecccc---ccchhhhhhhhccccceEEecccCCccccHHHHHHHHHHHhcCC
Q 044624 262 DGTQSALEALSHGVPINGWPLA---AEQFYNSNLLGEEVGVCAEVARGMNCAVLKEHIVVKIELVMNET 327 (358)
Q Consensus 262 gG~~s~~eal~~GvP~l~~P~~---~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~l~~ai~~ll~~~ 327 (358)
|+-++++||+++|+|+|++|-. .|. .+..+.+. |+.-.+. -+.+++.+++.++++|+
T Consensus 464 ~~g~~~lEAma~G~Pvv~~~g~~~~s~~--~~~~l~~~-g~~e~v~------~~~~~la~~i~~l~~~~ 523 (568)
T 2vsy_A 464 NAHTTASDALWTGCPVLTTPGETFAARV--AGSLNHHL-GLDEMNV------ADDAAFVAKAVALASDP 523 (568)
T ss_dssp CCSHHHHHHHHTTCCEEBCCCSSGGGSH--HHHHHHHH-TCGGGBC------SSHHHHHHHHHHHHHCH
T ss_pred CCcHHHHHHHhCCCCEEeccCCCchHHH--HHHHHHHC-CChhhhc------CCHHHHHHHHHHHhcCH
Confidence 7778999999999999997632 111 12222222 4332222 17899999999999988
No 51
>2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A
Probab=90.22 E-value=0.51 Score=44.20 Aligned_cols=56 Identities=7% Similarity=-0.131 Sum_probs=40.7
Q ss_pred cCCcchhhhhhcCcceEeccccccchhhhhhhhccc---------cceEEecccCCccccHHHHHHHHHHHh---cCC
Q 044624 262 DGTQSALEALSHGVPINGWPLAAEQFYNSNLLGEEV---------GVCAEVARGMNCAVLKEHIVVKIELVM---NET 327 (358)
Q Consensus 262 gG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~---------G~G~~l~~~~~~~~~~~~l~~ai~~ll---~~~ 327 (358)
|--++++||+++|+|+|+... ..+...+ ..- +.|+.++. -+.++++++|.+++ +|+
T Consensus 378 ~~g~~~lEAma~G~PvI~s~~----gg~~e~v-~~~~~~~~~~~~~~G~l~~~-----~d~~~la~~i~~ll~~~~~~ 445 (485)
T 2qzs_A 378 PCGLTQLYGLKYGTLPLVRRT----GGLADTV-SDCSLENLADGVASGFVFED-----SNAWSLLRAIRRAFVLWSRP 445 (485)
T ss_dssp SSCSHHHHHHHHTCEEEEESS----HHHHHHC-CBCCHHHHHTTCCCBEEECS-----SSHHHHHHHHHHHHHHHTSH
T ss_pred CCcHHHHHHHHCCCCEEECCC----CCcccee-ccCccccccccccceEEECC-----CCHHHHHHHHHHHHHHcCCH
Confidence 555788999999999999754 2333333 341 36777764 46899999999999 676
No 52
>1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A
Probab=89.76 E-value=0.55 Score=43.99 Aligned_cols=56 Identities=11% Similarity=-0.045 Sum_probs=40.8
Q ss_pred cCCcchhhhhhcCcceEeccccccchhhhhhhhccc---------cceEEecccCCccccHHHHHHHHHHHh---cCC
Q 044624 262 DGTQSALEALSHGVPINGWPLAAEQFYNSNLLGEEV---------GVCAEVARGMNCAVLKEHIVVKIELVM---NET 327 (358)
Q Consensus 262 gG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~---------G~G~~l~~~~~~~~~~~~l~~ai~~ll---~~~ 327 (358)
|--++++||+++|+|+|+... ..+...+ +.- +.|+.++. -+.++++++|.+++ +|+
T Consensus 377 ~~~~~~lEAma~G~PvI~s~~----gg~~e~v-~~~~~~~~~~~~~~G~l~~~-----~d~~~la~~i~~ll~~~~~~ 444 (485)
T 1rzu_A 377 PCGLTQLYALRYGCIPVVART----GGLADTV-IDANHAALASKAATGVQFSP-----VTLDGLKQAIRRTVRYYHDP 444 (485)
T ss_dssp SSCSHHHHHHHHTCEEEEESS----HHHHHHC-CBCCHHHHHTTCCCBEEESS-----CSHHHHHHHHHHHHHHHTCH
T ss_pred CCCHHHHHHHHCCCCEEEeCC----CChhhee-cccccccccccCCcceEeCC-----CCHHHHHHHHHHHHHHhCCH
Confidence 555789999999999999764 2333333 341 36777764 46899999999999 676
No 53
>2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A*
Probab=89.50 E-value=0.35 Score=42.92 Aligned_cols=51 Identities=14% Similarity=0.049 Sum_probs=38.1
Q ss_pred CcchhhhhhcCcceEeccccccchhhhhhhhc--cccceEEecccCCccccHHHHHHHHHHHhc
Q 044624 264 TQSALEALSHGVPINGWPLAAEQFYNSNLLGE--EVGVCAEVARGMNCAVLKEHIVVKIELVMN 325 (358)
Q Consensus 264 ~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~--~~G~G~~l~~~~~~~~~~~~l~~ai~~ll~ 325 (358)
-++++||+++|+|+|+.... .+...+.+ . +.|+.++ . +.++++++|.++++
T Consensus 255 ~~~~~EAma~G~PvI~s~~~----~~~e~~~~~~~-~~g~~~~-----~-d~~~l~~~i~~l~~ 307 (342)
T 2iuy_A 255 ATVVSEAAVSGTPVVGTGNG----CLAEIVPSVGE-VVGYGTD-----F-APDEARRTLAGLPA 307 (342)
T ss_dssp CHHHHHHHHTTCCEEECCTT----THHHHGGGGEE-ECCSSSC-----C-CHHHHHHHHHTSCC
T ss_pred cHHHHHHHhcCCCEEEcCCC----ChHHHhcccCC-CceEEcC-----C-CHHHHHHHHHHHHH
Confidence 46799999999999998753 35555544 3 4565553 4 88999999999986
No 54
>1vgv_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, isomerase; HET: UD1; 2.31A {Escherichia coli} SCOP: c.87.1.3 PDB: 1f6d_A*
Probab=88.22 E-value=1.4 Score=39.53 Aligned_cols=101 Identities=13% Similarity=0.043 Sum_probs=54.7
Q ss_pred CCcChHHHHHHHHHHHhCCCc-EEEEEeCCcch---h-hhhhcCCCCCCeEE-EeccCCccCCCCCCCCCCCCCCCchHH
Q 044624 6 AQGHVIPFLALAHHLESTKNY-TIAFVNTHLNI---K-KIKSSLPQSSPIHF-LETPFNIIDHDLPPCTENTDSHPFDVV 79 (358)
Q Consensus 6 ~~GH~~P~l~La~~L~~~rGh-~Vt~~t~~~~~---~-~~~~~~~~~~~~~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~ 79 (358)
..++...+.+|+++|++ +|+ +|.++.+.... . .... .++.+ ..++.. + . .. . .
T Consensus 9 ~~~~~~~~~~l~~~L~~-~g~~~~~v~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~----~---~----~~-~---~ 67 (384)
T 1vgv_A 9 TRPEAIKMAPLVHALAK-DPFFEAKVCVTAQHREMLDQVLKL-----FSIVPDYDLNIM----Q---P----GQ-G---L 67 (384)
T ss_dssp SHHHHHHHHHHHHHHHH-STTCEEEEEECCSSGGGGHHHHHH-----HTCCCSEECCCC----S---T----TS-C---H
T ss_pred ccHHHHHHHHHHHHHHh-CCCCceEEEEcCCCHHHHHHHHHH-----cCCCCCcceecC----C---C----Cc-c---H
Confidence 34567778899999999 995 77765443221 1 1222 12322 222110 0 0 00 0 1
Q ss_pred HHHHHHHhhchHHHHHHHHHHhhhcCCCCCcEEEECCC--Ccc-HHHHHHHhCCceEEEcc
Q 044624 80 RKLLEATLSFKPHFKKLIIDLIDEQNGHKPLCIITDMF--FGW-CKEIAQEYGIFHAIFIE 137 (358)
Q Consensus 80 ~~~~~~~~~~~~~l~~ll~~~~~~~~~~~pd~vV~D~~--~~~-~~~~A~~lgiP~v~~~~ 137 (358)
.. ........+.+++++. +||+|++-.. ..+ +..+|..+|+|++....
T Consensus 68 ~~---~~~~~~~~l~~~l~~~-------~pDvv~~~~~~~~~~~~~~~a~~~~ip~v~~~~ 118 (384)
T 1vgv_A 68 TE---ITCRILEGLKPILAEF-------KPDVVLVHGDTTTTLATSLAAFYQRIPVGHVEA 118 (384)
T ss_dssp HH---HHHHHHHHHHHHHHHH-------CCSEEEEETTCHHHHHHHHHHHTTTCCEEEESC
T ss_pred HH---HHHHHHHHHHHHHHHh-------CCCEEEEeCCchHHHHHHHHHHHHCCCEEEEec
Confidence 11 1112234566777877 8999998532 222 34567788999887643
No 55
>2hy7_A Glucuronosyltransferase GUMK; glycosyltransferases, xanthan, membrane-associated proteins; 1.90A {Xanthomonas campestris} PDB: 2q6v_A* 3cv3_A* 3cuy_A*
Probab=87.98 E-value=0.47 Score=43.63 Aligned_cols=50 Identities=6% Similarity=-0.076 Sum_probs=39.7
Q ss_pred cCCcchhhhh-------hcCcceEeccccccchhhhhhhhccccceEE-ecccCCccccHHHHHHHHHHHhcCC
Q 044624 262 DGTQSALEAL-------SHGVPINGWPLAAEQFYNSNLLGEEVGVCAE-VARGMNCAVLKEHIVVKIELVMNET 327 (358)
Q Consensus 262 gG~~s~~eal-------~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~-l~~~~~~~~~~~~l~~ai~~ll~~~ 327 (358)
|--++++||+ ++|+|+|+-.. +.+. ..|+. +.. -+.++++++|.++++|+
T Consensus 296 ~~~~~~lEAm~Kl~eYla~G~PVIas~~----------v~~~-~~G~l~v~~-----~d~~~la~ai~~ll~~~ 353 (406)
T 2hy7_A 296 QVPVYLADSSMKLLQYDFFGLPAVCPNA----------VVGP-YKSRFGYTP-----GNADSVIAAITQALEAP 353 (406)
T ss_dssp CCCTTHHHHCHHHHHHHHHTCCEEEEGG----------GTCS-CSSEEEECT-----TCHHHHHHHHHHHHHCC
T ss_pred cCchHHHHHHHHHHHHhhCCCcEEEehh----------cccC-cceEEEeCC-----CCHHHHHHHHHHHHhCc
Confidence 5556789999 99999999865 4444 55776 654 46899999999999988
No 56
>1v4v_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, two domains, homodimer, riken structural genomics/proteomics initiative, RSGI; HET: MSE; 1.80A {Thermus thermophilus} SCOP: c.87.1.3
Probab=87.74 E-value=2.1 Score=38.31 Aligned_cols=39 Identities=10% Similarity=-0.028 Sum_probs=26.6
Q ss_pred HHHHHHHHHHhhhcCCCCCcEEEECCC--Ccc-HHHHHHHhCCceEEEc
Q 044624 91 PHFKKLIIDLIDEQNGHKPLCIITDMF--FGW-CKEIAQEYGIFHAIFI 136 (358)
Q Consensus 91 ~~l~~ll~~~~~~~~~~~pd~vV~D~~--~~~-~~~~A~~lgiP~v~~~ 136 (358)
..+.+++++. +||+|++-.. ..+ +..+|+.+|||++.+.
T Consensus 81 ~~l~~~l~~~-------~pDvv~~~~~~~~~~~~~~~a~~~~ip~v~~~ 122 (376)
T 1v4v_A 81 PQAARALKEM-------GADYVLVHGDTLTTFAVAWAAFLEGIPVGHVE 122 (376)
T ss_dssp HHHHHHHHHT-------TCSEEEEESSCHHHHHHHHHHHHTTCCEEEET
T ss_pred HHHHHHHHHc-------CCCEEEEeCChHHHHHHHHHHHHhCCCEEEEe
Confidence 4456677776 8999998432 223 3567888999987653
No 57
>3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A*
Probab=87.00 E-value=2.9 Score=39.99 Aligned_cols=56 Identities=9% Similarity=-0.019 Sum_probs=35.8
Q ss_pred cchhhhhhcCcceEeccccccchhhhhhhhccccceEEecccC-C----ccccHHHHHHHHHHHhc
Q 044624 265 QSALEALSHGVPINGWPLAAEQFYNSNLLGEEVGVCAEVARGM-N----CAVLKEHIVVKIELVMN 325 (358)
Q Consensus 265 ~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~~~~-~----~~~~~~~l~~ai~~ll~ 325 (358)
.+++||+++|+|+|+-.. ......+.+. ..|....... + ...+.+++.++|++++.
T Consensus 416 l~~lEAma~G~PvI~s~~----gG~~e~V~dg-~~G~~~~~~~~~g~l~~~~d~~~la~ai~ral~ 476 (536)
T 3vue_A 416 LIQLQGMRYGTPCACAST----GGLVDTVIEG-KTGFHMGRLSVDCKVVEPSDVKKVAATLKRAIK 476 (536)
T ss_dssp SHHHHHHHTTCCEEECSC----THHHHHCCBT-TTEEECCCCCSCTTCCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCEEEcCC----CCchheeeCC-CCccccccCCCceeEECCCCHHHHHHHHHHHHH
Confidence 589999999999998654 3334444433 4455443210 0 12457889999988775
No 58
>2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A*
Probab=86.41 E-value=1.1 Score=40.05 Aligned_cols=44 Identities=9% Similarity=0.178 Sum_probs=32.1
Q ss_pred CCCcChHHHHHHHHHHHhCCCcEEEEEeCCcchhhhhhcCCCCCCeEEEecc
Q 044624 5 MAQGHVIPFLALAHHLESTKNYTIAFVNTHLNIKKIKSSLPQSSPIHFLETP 56 (358)
Q Consensus 5 p~~GH~~P~l~La~~L~~~rGh~Vt~~t~~~~~~~~~~~~~~~~~~~~~~~p 56 (358)
|..|.-.-+..|+++|++ +||+|++++....... . .++++..++
T Consensus 12 ~~gG~~~~~~~l~~~L~~-~G~~V~v~~~~~~~~~--~-----~~~~v~~~~ 55 (374)
T 2iw1_A 12 PFGGLQRDFMRIASTVAA-RGHHVRVYTQSWEGDC--P-----KAFELIQVP 55 (374)
T ss_dssp TTCHHHHHHHHHHHHHHH-TTCCEEEEESEECSCC--C-----TTCEEEECC
T ss_pred CCcchhhHHHHHHHHHHh-CCCeEEEEecCCCCCC--C-----CCcEEEEEc
Confidence 456777789999999999 9999999997532211 1 467776555
No 59
>2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A*
Probab=86.09 E-value=0.58 Score=41.48 Aligned_cols=81 Identities=7% Similarity=-0.122 Sum_probs=51.7
Q ss_pred CcChHHHHHHHHHHHhCCCcEEEEEeCCcchhhhhhcCCCCCCeEEEeccCCccCCCCCCCCCCCCCCCchHHHHHHHHH
Q 044624 7 QGHVIPFLALAHHLESTKNYTIAFVNTHLNIKKIKSSLPQSSPIHFLETPFNIIDHDLPPCTENTDSHPFDVVRKLLEAT 86 (358)
Q Consensus 7 ~GH~~P~l~La~~L~~~rGh~Vt~~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (358)
.|.-.-...|+++|++ +||+|++++....... . .++++. +. .. .
T Consensus 30 gG~~~~~~~l~~~L~~-~G~~v~v~~~~~~~~~--~-----~~~~~~--~~-----------------~~--~------- 73 (342)
T 2iuy_A 30 GGIQWVVANLMDGLLE-LGHEVFLLGAPGSPAG--R-----PGLTVV--PA-----------------GE--P------- 73 (342)
T ss_dssp CHHHHHHHHHHHHHHH-TTCEEEEESCTTSCCC--S-----TTEEEC--SC-----------------CS--H-------
T ss_pred ChHHHHHHHHHHHHHH-cCCeEEEEecCCCCCC--C-----Ccceec--cC-----------------Cc--H-------
Confidence 5667788999999999 9999999998643211 1 233322 10 00 0
Q ss_pred hhchHHHHHHHHHHhhhcCCCCCcEEEECCCCccHHHHHHHhCCceEEEc
Q 044624 87 LSFKPHFKKLIIDLIDEQNGHKPLCIITDMFFGWCKEIAQEYGIFHAIFI 136 (358)
Q Consensus 87 ~~~~~~l~~ll~~~~~~~~~~~pd~vV~D~~~~~~~~~A~~lgiP~v~~~ 136 (358)
..+.+++++. +||+|++........ ++...++| +...
T Consensus 74 ----~~l~~~l~~~-------~~Dvi~~~~~~~~~~-~~~~~~~p-v~~~ 110 (342)
T 2iuy_A 74 ----EEIERWLRTA-------DVDVVHDHSGGVIGP-AGLPPGTA-FISS 110 (342)
T ss_dssp ----HHHHHHHHHC-------CCSEEEECSSSSSCS-TTCCTTCE-EEEE
T ss_pred ----HHHHHHHHhc-------CCCEEEECCchhhHH-HHhhcCCC-EEEe
Confidence 0445666665 899999987554322 26678999 6543
No 60
>2wqk_A 5'-nucleotidase SURE; SURE protein, putative acid phosphatase, structural genomics, 3-D structure, mixed alpha/beta protein, NPPSFA; 1.50A {Aquifex aeolicus}
Probab=85.36 E-value=0.73 Score=39.33 Aligned_cols=26 Identities=23% Similarity=0.287 Sum_probs=20.4
Q ss_pred HHHHHHHHHhCCCcEEEEEeCCcchhhh
Q 044624 13 FLALAHHLESTKNYTIAFVNTHLNIKKI 40 (358)
Q Consensus 13 ~l~La~~L~~~rGh~Vt~~t~~~~~~~~ 40 (358)
+..|+++|.+ .| +|+++.+...+.-.
T Consensus 17 i~~L~~~l~~-~g-~V~VvAP~~~~Sg~ 42 (251)
T 2wqk_A 17 INALREALKS-LG-RVVVVAPDRNLSGV 42 (251)
T ss_dssp HHHHHHHHTT-TS-EEEEEEESSCCTTS
T ss_pred HHHHHHHHHh-CC-CEEEEeeCCCCccc
Confidence 5679999999 88 59999887766543
No 61
>3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A*
Probab=85.30 E-value=0.97 Score=45.56 Aligned_cols=109 Identities=16% Similarity=0.188 Sum_probs=54.7
Q ss_pred HHHHHHHhCCCcEEE----EEeCCcchh-------hhhhcCCCCCCeEEEeccCCccCCCCCCCCCCCCCCCchHHHHHH
Q 044624 15 ALAHHLESTKNYTIA----FVNTHLNIK-------KIKSSLPQSSPIHFLETPFNIIDHDLPPCTENTDSHPFDVVRKLL 83 (358)
Q Consensus 15 ~La~~L~~~rGh~Vt----~~t~~~~~~-------~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (358)
.||++|++ +||+|+ ++|...... ..+.. ...+++++..+|+... ++.-...-..... ...+..+
T Consensus 318 ela~~L~~-~G~~V~~~V~v~Tr~~~~~~g~~y~~~~e~i-~~~~gv~I~RvP~~~~-~g~l~~~l~k~~L-~~~L~~F- 392 (816)
T 3s28_A 318 EMLQRIKQ-QGLNIKPRILILTRLLPDAVGTTCGERLERV-YDSEYCDILRVPFRTE-KGIVRKWISRFEV-WPYLETY- 392 (816)
T ss_dssp HHHHHHHH-TTCCCCCEEEEEEECCTTCTTSSTTSSEEEC-TTCSSEEEEEECEEET-TEEECSCCCTTTC-GGGHHHH-
T ss_pred HHHHHHHH-CCCccceeeEEEeCCCCCCCCCccCCcceee-cCcCCeEEEEecCCCc-cccccccccHHHH-HHHHHHH-
Confidence 48888999 999998 887643221 11111 0015788888875311 1100111001111 1111111
Q ss_pred HHHhhchHHHHHHHHHHhhhcCCCCCcEEEECCCCc--cHHHHHHHhCCceEEEcch
Q 044624 84 EATLSFKPHFKKLIIDLIDEQNGHKPLCIITDMFFG--WCKEIAQEYGIFHAIFIEG 138 (358)
Q Consensus 84 ~~~~~~~~~l~~ll~~~~~~~~~~~pd~vV~D~~~~--~~~~~A~~lgiP~v~~~~~ 138 (358)
....+..++... .+ +||+|.+..... .+..+++.+|||.|....+
T Consensus 393 -----~~~~l~~il~~~----~~-~PDVIHsH~~~sglva~llar~~gvP~V~T~Hs 439 (816)
T 3s28_A 393 -----TEDAAVELSKEL----NG-KPDLIIGNYSDGNLVASLLAHKLGVTQCTIAHA 439 (816)
T ss_dssp -----HHHHHHHHHHHC----SS-CCSEEEEEHHHHHHHHHHHHHHHTCCEEEECSC
T ss_pred -----HHHHHHHHHHhc----CC-CCeEEEeCCchHHHHHHHHHHHcCCCEEEEEec
Confidence 112233344332 23 799998864322 2456888999999876543
No 62
>3tov_A Glycosyl transferase family 9; structural genomics, PSI-BIOL protein structure initiative, midwest center for structural genomics, MCSG; 2.98A {Veillonella parvula}
Probab=84.48 E-value=21 Score=31.63 Aligned_cols=97 Identities=11% Similarity=-0.030 Sum_probs=60.6
Q ss_pred ccCCCcChHHHHHHHHHHHhCC--CcEEEEEeCCcchhhhhhcCCCCCCeE-EEeccCCccCCCCCCCCCCCCCCCchHH
Q 044624 3 PFMAQGHVIPFLALAHHLESTK--NYTIAFVNTHLNIKKIKSSLPQSSPIH-FLETPFNIIDHDLPPCTENTDSHPFDVV 79 (358)
Q Consensus 3 ~~p~~GH~~P~l~La~~L~~~r--Gh~Vt~~t~~~~~~~~~~~~~~~~~~~-~~~~p~~~~~~~~~~~~~~~~~~~~~~~ 79 (358)
-..+.|++.-..++.++|++ + +.+|++++.+.+.+.++.. +.++ ++.++. . .. .
T Consensus 15 ~~~~lGD~i~~~P~l~~L~~-~~P~a~I~~l~~~~~~~l~~~~----p~vd~vi~~~~---------~-------~~--~ 71 (349)
T 3tov_A 15 FLMHLGDVILTTPFLEVLRK-AAPHSHITYVIDEKLQQVMEYN----PNIDELIVVDK---------K-------GR--H 71 (349)
T ss_dssp CCCCHHHHHTTHHHHHHHHH-HCTTSEEEEEEEGGGGGGTSSC----TTCSEEEEECC---------S-------SH--H
T ss_pred ecCcccHHHHHHHHHHHHHH-HCCCCEEEEEECcchhHHHhcC----CCccEEEEeCc---------c-------cc--c
Confidence 34567888889999999998 6 9999999999888777653 5554 443321 0 00 0
Q ss_pred HHHHHHHhhchHHHHHHHHHHhhhcCCCCC-cEEEECCCCccHHHHHHHhCCceEE
Q 044624 80 RKLLEATLSFKPHFKKLIIDLIDEQNGHKP-LCIITDMFFGWCKEIAQEYGIFHAI 134 (358)
Q Consensus 80 ~~~~~~~~~~~~~l~~ll~~~~~~~~~~~p-d~vV~D~~~~~~~~~A~~lgiP~v~ 134 (358)
..+.. .. .+...++.. ++ |++|.=....-...++...|+|...
T Consensus 72 ~~~~~----~~-~l~~~Lr~~-------~y~D~vidl~~~~rs~~l~~~~~a~~ri 115 (349)
T 3tov_A 72 NSISG----LN-EVAREINAK-------GKTDIVINLHPNERTSYLAWKIHAPITT 115 (349)
T ss_dssp HHHHH----HH-HHHHHHHHH-------CCCCEEEECCCSHHHHHHHHHHCCSEEE
T ss_pred ccHHH----HH-HHHHHHhhC-------CCCeEEEECCCChHHHHHHHHhCCCeEE
Confidence 11110 11 112223333 79 9998655555556678888999654
No 63
>2phj_A 5'-nucleotidase SURE; SURE protein, putative acid phosphatase, structural genomics, 3-D structure, mixed alpha/beta protein, NPPSFA; 1.50A {Aquifex aeolicus VF5} PDB: 2wqk_A
Probab=81.15 E-value=1.9 Score=36.66 Aligned_cols=26 Identities=23% Similarity=0.287 Sum_probs=21.5
Q ss_pred HHHHHHHHHhCCCcEEEEEeCCcchhhh
Q 044624 13 FLALAHHLESTKNYTIAFVNTHLNIKKI 40 (358)
Q Consensus 13 ~l~La~~L~~~rGh~Vt~~t~~~~~~~~ 40 (358)
+..|+++|.+ .| +|+++.+...+.-.
T Consensus 17 i~aL~~~l~~-~g-~V~VVAP~~~~Sg~ 42 (251)
T 2phj_A 17 INALREALKS-LG-RVVVVAPDRNLSGV 42 (251)
T ss_dssp HHHHHHHHTT-TS-EEEEEEESSCCTTS
T ss_pred HHHHHHHHHh-cC-CEEEEecCCCccCC
Confidence 5679999999 88 99999998776544
No 64
>3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A
Probab=80.10 E-value=9.5 Score=33.76 Aligned_cols=104 Identities=12% Similarity=0.008 Sum_probs=54.2
Q ss_pred CCcChHHHHHHHHHHHhCC-C-cEEEEEeCCcchhhhhhcCCCCCCeEE-EeccCCccCCCCCCCCCCCCCCCchHHHHH
Q 044624 6 AQGHVIPFLALAHHLESTK-N-YTIAFVNTHLNIKKIKSSLPQSSPIHF-LETPFNIIDHDLPPCTENTDSHPFDVVRKL 82 (358)
Q Consensus 6 ~~GH~~P~l~La~~L~~~r-G-h~Vt~~t~~~~~~~~~~~~~~~~~~~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (358)
..++......|+++|++ + | |+|.++++....+....... ..++.. ..++. ... ... ....
T Consensus 17 ~~~~~~~~~~l~~~L~~-~~~~~~v~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~------~~~------~~~--~~~~- 79 (375)
T 3beo_A 17 TRPEAIKMAPLVLELQK-HPEKIESIVTVTAQHRQMLDQVLS-IFGITPDFDLNI------MKD------RQT--LIDI- 79 (375)
T ss_dssp SHHHHHHHHHHHHHHTT-CTTTEEEEEEECCSSSHHHHHHHH-HHTCCCSEECCC------CCT------TCC--HHHH-
T ss_pred CcHHHHHHHHHHHHHHh-CCCCCCeEEEEcCCCHHHHHHHHH-HcCCCCcccccc------CCC------ccc--HHHH-
Confidence 34566778899999998 7 5 88887776543322111000 011211 11110 000 000 0111
Q ss_pred HHHHhhchHHHHHHHHHHhhhcCCCCCcEEEECCCCcc---HHHHHHHhCCceEEEc
Q 044624 83 LEATLSFKPHFKKLIIDLIDEQNGHKPLCIITDMFFGW---CKEIAQEYGIFHAIFI 136 (358)
Q Consensus 83 ~~~~~~~~~~l~~ll~~~~~~~~~~~pd~vV~D~~~~~---~~~~A~~lgiP~v~~~ 136 (358)
.......+.+++++. +||+|++....+. +..+|...|+|++.+.
T Consensus 80 ---~~~~~~~l~~~l~~~-------~pDvv~~~~~~~~~~~~~~~~~~~~ip~v~~~ 126 (375)
T 3beo_A 80 ---TTRGLEGLDKVMKEA-------KPDIVLVHGDTTTTFIASLAAFYNQIPVGHVE 126 (375)
T ss_dssp ---HHHHHHHHHHHHHHH-------CCSEEEEETTSHHHHHHHHHHHHTTCCEEEES
T ss_pred ---HHHHHHHHHHHHHHh-------CCCEEEEeCCchHHHHHHHHHHHHCCCEEEEe
Confidence 112233456777777 8999999543222 2356788899998654
No 65
>1j9j_A Stationary phase surviVal protein; SURE protein, unknown function; 1.90A {Thermotoga maritima} SCOP: c.106.1.1 PDB: 1ilv_A 1j9k_A* 1j9l_A*
Probab=71.08 E-value=10 Score=31.98 Aligned_cols=27 Identities=15% Similarity=0.180 Sum_probs=21.9
Q ss_pred HHHHHHHHHhCCCcEEEEEeCCcchhhhh
Q 044624 13 FLALAHHLESTKNYTIAFVNTHLNIKKIK 41 (358)
Q Consensus 13 ~l~La~~L~~~rGh~Vt~~t~~~~~~~~~ 41 (358)
+..|+++|++ .| +|+++.+...+.-..
T Consensus 16 i~aL~~~l~~-~g-~V~VVAP~~~~Sg~g 42 (247)
T 1j9j_A 16 IIVLAELLSE-EH-EVFVVAPDKERSATG 42 (247)
T ss_dssp HHHHHHHHTT-TS-EEEEEEESSCCTTCT
T ss_pred HHHHHHHHHh-CC-CEEEEecCCCCcCCc
Confidence 5679999999 88 899999987765443
No 66
>1l5x_A SurviVal protein E; structural genomics, putative acid phosphatase, mixed alpha/ protein, N-terminal rossmann-fold like; 2.00A {Pyrobaculum aerophilum} SCOP: c.106.1.1
Probab=66.06 E-value=8.9 Score=33.08 Aligned_cols=27 Identities=11% Similarity=-0.030 Sum_probs=22.0
Q ss_pred HHHHHHHHHhCCCcEEEEEeCCcchhhhh
Q 044624 13 FLALAHHLESTKNYTIAFVNTHLNIKKIK 41 (358)
Q Consensus 13 ~l~La~~L~~~rGh~Vt~~t~~~~~~~~~ 41 (358)
+..|+++|++ .| +|+++.+...+.-..
T Consensus 16 i~aL~~aL~~-~g-~V~VVAP~~~qSg~g 42 (280)
T 1l5x_A 16 LRLLYQFALS-LG-DVDVVAPESPKSATG 42 (280)
T ss_dssp HHHHHHHHGG-GS-EEEEEEESSCTTTSC
T ss_pred HHHHHHHHHh-CC-CEEEEecCCCCcCCc
Confidence 6679999999 88 999999987765443
No 67
>3nb0_A Glycogen [starch] synthase isoform 2; glycogen synthase, glucose-6-phosphate, yeast, allosteric AC transferase; HET: G6P; 2.41A {Saccharomyces cerevisiae} PDB: 3rt1_A* 3nch_A 3naz_A 3o3c_A* 3rsz_A*
Probab=65.72 E-value=3 Score=40.97 Aligned_cols=23 Identities=17% Similarity=0.068 Sum_probs=17.8
Q ss_pred cCCcchhhhhhcCcceEeccccc
Q 044624 262 DGTQSALEALSHGVPINGWPLAA 284 (358)
Q Consensus 262 gG~~s~~eal~~GvP~l~~P~~~ 284 (358)
|--.+.+||+++|+|+|+--..+
T Consensus 530 gfGl~~LEAmA~G~PvI~s~~gG 552 (725)
T 3nb0_A 530 PWGYTPAECTVMGVPSITTNVSG 552 (725)
T ss_dssp SSCHHHHHHHHTTCCEEEETTBH
T ss_pred CCCHHHHHHHHcCCCEEEeCCCC
Confidence 44458899999999999865533
No 68
>1psw_A ADP-heptose LPS heptosyltransferase II; structural genomics, NYSGXRC, LPS biosynthetic pathway, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.87.1.7
Probab=65.56 E-value=31 Score=30.11 Aligned_cols=38 Identities=11% Similarity=0.038 Sum_probs=31.3
Q ss_pred cCCCcChHHHHHHHHHHHhCC--CcEEEEEeCCcchhhhhh
Q 044624 4 FMAQGHVIPFLALAHHLESTK--NYTIAFVNTHLNIKKIKS 42 (358)
Q Consensus 4 ~p~~GH~~P~l~La~~L~~~r--Gh~Vt~~t~~~~~~~~~~ 42 (358)
..+.|++.-..++.++|++ + +.+|++++.+.+.+.++.
T Consensus 8 ~~~~GD~i~~~p~l~~Lk~-~~P~~~i~~l~~~~~~~l~~~ 47 (348)
T 1psw_A 8 PSWVGDMMMSQSLYRTLQA-RYPQAIIDVMAPAWCRPLLSR 47 (348)
T ss_dssp CSSHHHHHHHHHHHHHHHH-HSTTCEEEEEECGGGHHHHTT
T ss_pred ccccCHHHHHHHHHHHHHH-HCCCCEEEEEECcchhHHHhc
Confidence 3455888888999999998 6 999999999877776654
No 69
>2e6c_A 5'-nucleotidase SURE; SURE protein, cowith manganese ION and AMP hydrolase; 2.05A {Thermus thermophilus} PDB: 2e6b_A 2e69_A 2e6e_A 2e6g_A 2e6h_A
Probab=62.76 E-value=18 Score=30.51 Aligned_cols=41 Identities=10% Similarity=0.113 Sum_probs=26.9
Q ss_pred HHHHHHHHHhCCCcEEEEEeCCcchhhhhhcCCCCCCeEEEec
Q 044624 13 FLALAHHLESTKNYTIAFVNTHLNIKKIKSSLPQSSPIHFLET 55 (358)
Q Consensus 13 ~l~La~~L~~~rGh~Vt~~t~~~~~~~~~~~~~~~~~~~~~~~ 55 (358)
+..|+++|++ .| +|+++.+...+.-......-...+++..+
T Consensus 16 i~aL~~~l~~-~g-~V~VVAP~~~~Sg~g~siTl~~pl~~~~~ 56 (244)
T 2e6c_A 16 LWALAEAASQ-FG-EVFVAAPDTEQSAAGHAITIAHPVRAYPH 56 (244)
T ss_dssp HHHHHHHHTT-TS-EEEEEEECSSCCCCCSSCCCSSCBEEEEC
T ss_pred HHHHHHHHHh-CC-CEEEEecCCCCcCCcccccCCCCeEEEEe
Confidence 5679999999 88 89999998776543332111144555544
No 70
>1uqt_A Alpha, alpha-trehalose-phosphate synthase; glycosyltransferase, transferase; HET: U2F; 2.0A {Escherichia coli} SCOP: c.87.1.6 PDB: 1uqu_A* 2wtx_A* 1gz5_A*
Probab=62.23 E-value=18 Score=33.85 Aligned_cols=53 Identities=15% Similarity=0.118 Sum_probs=36.3
Q ss_pred cCCc-chhhhhhcCc-----ceEeccccccchhhhhhhhccccceEEecccCCccccHHHHHHHHHHHhcCC
Q 044624 262 DGTQ-SALEALSHGV-----PINGWPLAAEQFYNSNLLGEEVGVCAEVARGMNCAVLKEHIVVKIELVMNET 327 (358)
Q Consensus 262 gG~~-s~~eal~~Gv-----P~l~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~l~~ai~~ll~~~ 327 (358)
=|+| +.+||+++|+ |+|+--+.+ .+..+ .-|+.++. -+.++++++|.++|+++
T Consensus 362 EGfgLv~lEAmA~g~~~~~gpvV~S~~~G----~~~~l----~~g~lv~p-----~d~~~lA~ai~~lL~~~ 420 (482)
T 1uqt_A 362 DGMNLVAKEYVAAQDPANPGVLVLSQFAG----AANEL----TSALIVNP-----YDRDEVAAALDRALTMS 420 (482)
T ss_dssp BSCCHHHHHHHHHSCTTSCCEEEEETTBG----GGGTC----TTSEEECT-----TCHHHHHHHHHHHHTCC
T ss_pred ccCCchHHHHHHhCCCCCCCCEEEECCCC----CHHHh----CCeEEECC-----CCHHHHHHHHHHHHcCC
Confidence 5555 7899999998 665543322 22222 23667764 56899999999999875
No 71
>3t5t_A Putative glycosyltransferase; GTB fold, pseudoglycosyltransferase; 1.70A {Streptomyces hygroscopicus} PDB: 4f97_A* 4f96_B* 4f9f_A* 3t7d_A*
Probab=59.04 E-value=14 Score=34.71 Aligned_cols=54 Identities=17% Similarity=0.138 Sum_probs=36.8
Q ss_pred cCCcc-hhhhhhcC---cceEeccccccchhhhhhhhccccceEEecccCCccccHHHHHHHHHHHhcCC
Q 044624 262 DGTQS-ALEALSHG---VPINGWPLAAEQFYNSNLLGEEVGVCAEVARGMNCAVLKEHIVVKIELVMNET 327 (358)
Q Consensus 262 gG~~s-~~eal~~G---vP~l~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~l~~ai~~ll~~~ 327 (358)
-|+|- .+||+++| .|+|.--+.+ .+..+. .-|+.+++ -+.++++++|.++|+++
T Consensus 382 EGfgLv~~EamA~~~~~g~lVlSe~aG----a~~~l~---~~allVnP-----~D~~~lA~AI~~aL~m~ 439 (496)
T 3t5t_A 382 DGQNLSTFEAPLVNERDADVILSETCG----AAEVLG---EYCRSVNP-----FDLVEQAEAISAALAAG 439 (496)
T ss_dssp BSCCSHHHHHHHHCSSCCEEEEETTBT----THHHHG---GGSEEECT-----TBHHHHHHHHHHHHHCC
T ss_pred ccCChhHHHHHHhCCCCCCEEEeCCCC----CHHHhC---CCEEEECC-----CCHHHHHHHHHHHHcCC
Confidence 78885 48999996 5554433222 222231 24788875 67899999999999877
No 72
>1kjn_A MTH0777; hypotethical protein, structural genomics, PSI, protein structure initiative; 2.20A {Methanothermobacterthermautotrophicus} SCOP: c.115.1.1
Probab=58.43 E-value=7 Score=30.04 Aligned_cols=31 Identities=10% Similarity=0.278 Sum_probs=26.8
Q ss_pred HHHHHHHHHHhCCCcEEEEEeCCcchhhhhhc
Q 044624 12 PFLALAHHLESTKNYTIAFVNTHLNIKKIKSS 43 (358)
Q Consensus 12 P~l~La~~L~~~rGh~Vt~~t~~~~~~~~~~~ 43 (358)
-.+-|+..|.+ +||+|+++.++...+.++-+
T Consensus 24 ~~lYl~~~Lk~-~G~~v~VA~npAAlkLleva 54 (157)
T 1kjn_A 24 LAIYTSHKLKK-KGFRVTVTANPAALRLVQVA 54 (157)
T ss_dssp HHHHHHHHHHH-TTCEEEEEECHHHHHHHHHH
T ss_pred HHHHHHHHHHh-cCCeeEEecCHHHHhheecc
Confidence 46789999999 99999999999888877653
No 73
>3ot5_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta; HET: PGE; 2.20A {Listeria monocytogenes}
Probab=58.17 E-value=11 Score=34.45 Aligned_cols=41 Identities=5% Similarity=-0.108 Sum_probs=29.0
Q ss_pred chHHHHHHHHHHhhhcCCCCCcEEEECCC--Ccc-HHHHHHHhCCceEEEc
Q 044624 89 FKPHFKKLIIDLIDEQNGHKPLCIITDMF--FGW-CKEIAQEYGIFHAIFI 136 (358)
Q Consensus 89 ~~~~l~~ll~~~~~~~~~~~pd~vV~D~~--~~~-~~~~A~~lgiP~v~~~ 136 (358)
....+.+++++. +||+|++-.. ..+ +..+|..+|||++.+.
T Consensus 102 ~~~~l~~~l~~~-------kPD~Vi~~gd~~~~l~~~laA~~~~IPv~h~~ 145 (403)
T 3ot5_A 102 VMNGINEVIAAE-------NPDIVLVHGDTTTSFAAGLATFYQQKMLGHVE 145 (403)
T ss_dssp HHHHHHHHHHHH-------CCSEEEEETTCHHHHHHHHHHHHTTCEEEEES
T ss_pred HHHHHHHHHHHc-------CCCEEEEECCchhHHHHHHHHHHhCCCEEEEE
Confidence 445667888888 9999987332 223 4568889999987654
No 74
>3to5_A CHEY homolog; alpha(5)beta(5), chemotaxis, FLIM, phosphorylation, motor AC signaling protein; 1.65A {Vibrio cholerae}
Probab=53.61 E-value=21 Score=26.77 Aligned_cols=31 Identities=6% Similarity=-0.045 Sum_probs=24.1
Q ss_pred CCcEEEECCCCcc--HHHHHHHh-------CCceEEEcch
Q 044624 108 KPLCIITDMFFGW--CKEIAQEY-------GIFHAIFIEG 138 (358)
Q Consensus 108 ~pd~vV~D~~~~~--~~~~A~~l-------giP~v~~~~~ 138 (358)
+||+||.|...+. +..+++++ .+|++.++..
T Consensus 57 ~~DlillD~~MP~mdG~el~~~ir~~~~~~~ipvI~lTa~ 96 (134)
T 3to5_A 57 DFDFVVTDWNMPGMQGIDLLKNIRADEELKHLPVLMITAE 96 (134)
T ss_dssp CCSEEEEESCCSSSCHHHHHHHHHHSTTTTTCCEEEEESS
T ss_pred CCCEEEEcCCCCCCCHHHHHHHHHhCCCCCCCeEEEEECC
Confidence 8999999999985 66777654 5888877654
No 75
>3ors_A N5-carboxyaminoimidazole ribonucleotide mutase; isomerase, isomerase,biosynthetic protein; 1.45A {Staphylococcus aureus subsp}
Probab=52.33 E-value=60 Score=25.29 Aligned_cols=79 Identities=13% Similarity=0.136 Sum_probs=44.4
Q ss_pred CcchhhhhhcCcceEeccccccch-----hhhhhhhccccceEEe-cccCCccccHHHHHHHHHHHhcCCCCCHHHHHHH
Q 044624 264 TQSALEALSHGVPINGWPLAAEQF-----YNSNLLGEEVGVCAEV-ARGMNCAVLKEHIVVKIELVMNETEKGKPMRMKD 337 (358)
Q Consensus 264 ~~s~~eal~~GvP~l~~P~~~DQ~-----~na~~v~~~~G~G~~l-~~~~~~~~~~~~l~~ai~~ll~~~~~~~~~r~~a 337 (358)
.-++..++ .-+|+|.+|....-. ..+..-.-. |+.+.. ..++.+-.++.-++..|-.+ .|+ .++++.
T Consensus 72 LpgvvA~~-t~~PVIgVP~~~~~l~G~dsLlS~vqmp~-GvPVatV~I~~a~~~nAa~lAa~Il~~-~d~----~l~~kl 144 (163)
T 3ors_A 72 LPGMVASL-TTLPVIGVPIETKSLKGIDSLLSIVQMPG-GIPVATTAIGAAGAKNAGILAARMLSI-QNP----SLVEKL 144 (163)
T ss_dssp HHHHHHHH-CSSCEEEEEECCTTTTTHHHHHHHHTCCT-TSCCEECCSTHHHHHHHHHHHHHHHHT-TCT----HHHHHH
T ss_pred hHHHHHhc-cCCCEEEeeCCCCCCCCHHHHHHHhhCCC-CCceEEEEcCCcccHHHHHHHHHHHhC-CCH----HHHHHH
Confidence 33455444 568999999754321 111111223 553332 22111245566666666544 678 899999
Q ss_pred HHHHHHHHHhhc
Q 044624 338 LEVKEIIDNAFR 349 (358)
Q Consensus 338 ~~l~~~~~~a~~ 349 (358)
+..++..++.+.
T Consensus 145 ~~~r~~~~~~v~ 156 (163)
T 3ors_A 145 NQYESSLIQKVE 156 (163)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 999988887664
No 76
>2yvq_A Carbamoyl-phosphate synthase; conserved hypothetical protein, structural genomics, NPPSFA; 1.98A {Homo sapiens}
Probab=51.79 E-value=27 Score=26.59 Aligned_cols=87 Identities=15% Similarity=0.089 Sum_probs=52.9
Q ss_pred HHHHHHHHHHHhCCCcEEEEEeCCcchhhhhhcCCCCCCeEEEeccCCccCCCCCCCCCCCCCCCchHHHHHHHHHhhch
Q 044624 11 IPFLALAHHLESTKNYTIAFVNTHLNIKKIKSSLPQSSPIHFLETPFNIIDHDLPPCTENTDSHPFDVVRKLLEATLSFK 90 (358)
Q Consensus 11 ~P~l~La~~L~~~rGh~Vt~~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (358)
.-++.+++.|.+ .||+ ++++....+.++. .|+....+... +++.. . ...
T Consensus 37 ~~l~~~a~~l~~-lGf~--i~AT~GTa~~L~~-----~Gi~v~~v~k~------~egg~--~---------------~~~ 85 (143)
T 2yvq_A 37 PRFLGVAEQLHN-EGFK--LFATEATSDWLNA-----NNVPATPVAWP------SQEGQ--N---------------PSL 85 (143)
T ss_dssp HHHHHHHHHHHT-TTCE--EEEEHHHHHHHHH-----TTCCCEEECCG------GGC----------------------C
T ss_pred HHHHHHHHHHHH-CCCE--EEECchHHHHHHH-----cCCeEEEEEec------cCCCc--c---------------ccc
Confidence 348889999999 9996 4444455667766 66666654311 11000 0 011
Q ss_pred HHHHHHHHHHhhhcCCCCCcEEEECCCC--------ccHHHHHHHhCCceEEE
Q 044624 91 PHFKKLIIDLIDEQNGHKPLCIITDMFF--------GWCKEIAQEYGIFHAIF 135 (358)
Q Consensus 91 ~~l~~ll~~~~~~~~~~~pd~vV~D~~~--------~~~~~~A~~lgiP~v~~ 135 (358)
+++.+++++- +.|+||.-..- +.....|-.+|||++.-
T Consensus 86 ~~i~d~i~~g-------~i~lVInt~~~~~~~~~d~~~iRR~Av~~~IP~~T~ 131 (143)
T 2yvq_A 86 SSIRKLIRDG-------SIDLVINLPNNNTKFVHDNYVIRRTAVDSGIPLLTN 131 (143)
T ss_dssp BCHHHHHHTT-------SCCEEEECCCCCGGGHHHHHHHHHHHHHTTCCEECS
T ss_pred ccHHHHHHCC-------CceEEEECCCCCCcCCccHHHHHHHHHHhCCCeEcC
Confidence 3455666654 89999996643 12345788999998763
No 77
>2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A*
Probab=51.61 E-value=5.6 Score=36.47 Aligned_cols=24 Identities=17% Similarity=0.249 Sum_probs=21.4
Q ss_pred HHHHHHHHHHHhCCCcEEEEEeCCc
Q 044624 11 IPFLALAHHLESTKNYTIAFVNTHL 35 (358)
Q Consensus 11 ~P~l~La~~L~~~rGh~Vt~~t~~~ 35 (358)
+.+..|+++|++ +||+|++++...
T Consensus 66 ~~v~~la~~L~~-~GheV~Vvt~~~ 89 (413)
T 2x0d_A 66 STALKLFEQFDN-KKFKKRIILTDA 89 (413)
T ss_dssp HHHHHHHTTSCT-TTCEEEEEESSC
T ss_pred HHHHHHHHHHHH-cCCceEEEEecC
Confidence 458899999999 999999999863
No 78
>2lnd_A De novo designed protein, PFK fold; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Artificial gene}
Probab=51.06 E-value=13 Score=25.04 Aligned_cols=48 Identities=19% Similarity=0.234 Sum_probs=31.3
Q ss_pred cCcceEeccccccchhhhh---hhhccccceEEecccCCccccHHHHHHHHHHHhc
Q 044624 273 HGVPINGWPLAAEQFYNSN---LLGEEVGVCAEVARGMNCAVLKEHIVVKIELVMN 325 (358)
Q Consensus 273 ~GvP~l~~P~~~DQ~~na~---~v~~~~G~G~~l~~~~~~~~~~~~l~~ai~~ll~ 325 (358)
+|+|++++--.+.|.+... ...+. |+...+-+ ..+++++.+.+++.|.
T Consensus 50 ngkplvvfvngasqndvnefqneakke-gvsydvlk----stdpeeltqrvreflk 100 (112)
T 2lnd_A 50 NGKPLVVFVNGASQNDVNEFQNEAKKE-GVSYDVLK----STDPEELTQRVREFLK 100 (112)
T ss_dssp CCSCEEEEECSCCHHHHHHHHHHHHHH-TCEEEEEE----CCCHHHHHHHHHHHHH
T ss_pred cCCeEEEEecCcccccHHHHHHHHHhc-Ccchhhhc----cCCHHHHHHHHHHHHH
Confidence 5777777766666654332 23334 66555543 6789999999998874
No 79
>3oow_A Phosphoribosylaminoimidazole carboxylase,catalyic; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE; 1.75A {Francisella tularensis subsp} SCOP: c.23.8.1 PDB: 3opq_A*
Probab=51.06 E-value=74 Score=24.87 Aligned_cols=77 Identities=14% Similarity=0.129 Sum_probs=44.5
Q ss_pred chhhhhhcCcceEeccccccch------hhhhhhhccccceEEe-cccCCccccHHHHHHHHHHHhcCCCCCHHHHHHHH
Q 044624 266 SALEALSHGVPINGWPLAAEQF------YNSNLLGEEVGVCAEV-ARGMNCAVLKEHIVVKIELVMNETEKGKPMRMKDL 338 (358)
Q Consensus 266 s~~eal~~GvP~l~~P~~~DQ~------~na~~v~~~~G~G~~l-~~~~~~~~~~~~l~~ai~~ll~~~~~~~~~r~~a~ 338 (358)
++..++. -+|+|.+|...-.. .-...+. . |+++.. ..++.+-.++.-++..|-.+ .|+ .++++.+
T Consensus 76 gvvA~~t-~~PVIgVP~~~~~l~G~dsLlS~vqmp-~-gvpVatV~I~~ag~~nAa~lAa~Il~~-~d~----~l~~kl~ 147 (166)
T 3oow_A 76 GMVAAKT-TLPVLGVPVKSSTLNGQDSLLSIVQMP-A-GIPVATFAIGMAGAKNAALFAASILQH-TDI----NIAKALA 147 (166)
T ss_dssp HHHHHTC-SSCEEEEECCCTTTTTHHHHHHHHTCC-T-TSCCEECCSTHHHHHHHHHHHHHHHGG-GCH----HHHHHHH
T ss_pred HHHHhcc-CCCEEEeecCcCCCCCHHHHHHHhcCC-C-CCceEEEecCCccchHHHHHHHHHHcC-CCH----HHHHHHH
Confidence 4444433 58999999844211 1112232 3 555543 22111234556666555444 678 8999999
Q ss_pred HHHHHHHHhhcc
Q 044624 339 EVKEIIDNAFRN 350 (358)
Q Consensus 339 ~l~~~~~~a~~~ 350 (358)
..++..++.+.+
T Consensus 148 ~~r~~~~~~v~~ 159 (166)
T 3oow_A 148 EFRAEQTRFVLE 159 (166)
T ss_dssp HHHHHHHHHHHT
T ss_pred HHHHHHHHHHHh
Confidence 999998887754
No 80
>1g5t_A COB(I)alamin adenosyltransferase; P-loop protein, cobalamin biosynthesis, RECA fold; HET: ATP; 1.80A {Salmonella typhimurium} SCOP: c.37.1.11 PDB: 1g5r_A* 1g64_A*
Probab=50.05 E-value=99 Score=24.89 Aligned_cols=32 Identities=9% Similarity=0.052 Sum_probs=25.7
Q ss_pred cccCCCcChHHHHHHHHHHHhCCCcEEEEEeCC
Q 044624 2 LPFMAQGHVIPFLALAHHLESTKNYTIAFVNTH 34 (358)
Q Consensus 2 ~~~p~~GH~~P~l~La~~L~~~rGh~Vt~~t~~ 34 (358)
++-++.|-..-.+.+|.+.+. +|+.|.|+.--
T Consensus 34 ~tG~GkGKTTaA~GlalRA~g-~G~rV~~vQF~ 65 (196)
T 1g5t_A 34 FTGNGKGKTTAAFGTAARAVG-HGKNVGVVQFI 65 (196)
T ss_dssp EESSSSCHHHHHHHHHHHHHH-TTCCEEEEESS
T ss_pred ECCCCCCHHHHHHHHHHHHHH-CCCeEEEEEee
Confidence 455677878888888888899 99999999543
No 81
>2hy7_A Glucuronosyltransferase GUMK; glycosyltransferases, xanthan, membrane-associated proteins; 1.90A {Xanthomonas campestris} PDB: 2q6v_A* 3cv3_A* 3cuy_A*
Probab=49.89 E-value=58 Score=29.33 Aligned_cols=19 Identities=16% Similarity=0.254 Sum_probs=15.7
Q ss_pred HHHHHHHHhCCCcEEEEEeCC
Q 044624 14 LALAHHLESTKNYTIAFVNTH 34 (358)
Q Consensus 14 l~La~~L~~~rGh~Vt~~t~~ 34 (358)
..+++.|++ +| +|++++..
T Consensus 34 ~~l~~~l~~-~G-~V~vi~~~ 52 (406)
T 2hy7_A 34 HFITDQLAL-RG-TTRFFSLR 52 (406)
T ss_dssp HHHHHHHHH-HS-CEEEEECS
T ss_pred hHHHHHHHh-CC-ceEEEEec
Confidence 457889999 99 99999654
No 82
>2lpm_A Two-component response regulator; transcription regulator; NMR {Sinorhizobium meliloti}
Probab=49.00 E-value=10 Score=28.14 Aligned_cols=28 Identities=11% Similarity=-0.076 Sum_probs=20.6
Q ss_pred CCcEEEECCCCcc--HHHHHHH---hCCceEEE
Q 044624 108 KPLCIITDMFFGW--CKEIAQE---YGIFHAIF 135 (358)
Q Consensus 108 ~pd~vV~D~~~~~--~~~~A~~---lgiP~v~~ 135 (358)
+||+||.|...+. +..++++ .++|.+.+
T Consensus 53 ~~DlvllDi~mP~~~G~el~~~lr~~~ipvI~l 85 (123)
T 2lpm_A 53 QFDIAIIDVNLDGEPSYPVADILAERNVPFIFA 85 (123)
T ss_dssp CSSEEEECSSSSSCCSHHHHHHHHHTCCSSCCB
T ss_pred CCCEEEEecCCCCCCHHHHHHHHHcCCCCEEEE
Confidence 8999999999874 4556554 47786554
No 83
>2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A
Probab=48.04 E-value=11 Score=34.79 Aligned_cols=27 Identities=11% Similarity=-0.043 Sum_probs=22.1
Q ss_pred cChHHHHHHHHHHHhCCCcEEEEEeCCc
Q 044624 8 GHVIPFLALAHHLESTKNYTIAFVNTHL 35 (358)
Q Consensus 8 GH~~P~l~La~~L~~~rGh~Vt~~t~~~ 35 (358)
|=-.-+..|+++|++ +||+|+++++..
T Consensus 18 G~~~~~~~la~~L~~-~G~~V~vi~~~~ 44 (485)
T 2qzs_A 18 GLADVIGALPAAQIA-DGVDARVLLPAF 44 (485)
T ss_dssp HHHHHHHHHHHHHHH-TTCEEEEEEECC
T ss_pred cHHHHHHHHHHHHHH-cCCEEEEEecCc
Confidence 334557789999999 999999999754
No 84
>1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A
Probab=46.98 E-value=12 Score=34.56 Aligned_cols=28 Identities=18% Similarity=0.006 Sum_probs=22.9
Q ss_pred CcChHHHHHHHHHHHhCCCcEEEEEeCCc
Q 044624 7 QGHVIPFLALAHHLESTKNYTIAFVNTHL 35 (358)
Q Consensus 7 ~GH~~P~l~La~~L~~~rGh~Vt~~t~~~ 35 (358)
.|=-.-+..|+++|++ +||+|+++++..
T Consensus 17 GG~~~~~~~la~~L~~-~G~~V~vi~~~~ 44 (485)
T 1rzu_A 17 GGLADVVGALPIALEA-HGVRTRTLIPGY 44 (485)
T ss_dssp SHHHHHHHHHHHHHHT-TTCEEEEEEECC
T ss_pred ccHHHHHHHHHHHHHH-cCCeEEEEeccc
Confidence 3444567889999999 999999999754
No 85
>3kuu_A Phosphoribosylaminoimidazole carboxylase catalyti PURE; 3-layer (ABA) sandwich, rossmann fold, csgid, lyase, structu genomics; 1.41A {Yersinia pestis} SCOP: c.23.8.1 PDB: 1d7a_A* 1qcz_A 2ate_A* 2nsl_A* 2nsh_A* 2nsj_A*
Probab=46.43 E-value=71 Score=25.15 Aligned_cols=78 Identities=17% Similarity=0.176 Sum_probs=42.9
Q ss_pred chhhhhhcCcceEeccccccch-hhhhhh--h--ccccceEE-ecccCCccccHHHHHHHHHHHhcCCCCCHHHHHHHHH
Q 044624 266 SALEALSHGVPINGWPLAAEQF-YNSNLL--G--EEVGVCAE-VARGMNCAVLKEHIVVKIELVMNETEKGKPMRMKDLE 339 (358)
Q Consensus 266 s~~eal~~GvP~l~~P~~~DQ~-~na~~v--~--~~~G~G~~-l~~~~~~~~~~~~l~~ai~~ll~~~~~~~~~r~~a~~ 339 (358)
++..++. -+|+|.+|...--. .....+ + -. |+.+. +..++.+-.++.-++..|-.+ .|+ .++++.+.
T Consensus 83 gvvA~~t-~~PVIgVP~~~~~l~G~dsLlS~vqmP~-GvPVatV~I~~a~~~nAa~lAa~ILa~-~d~----~l~~kl~~ 155 (174)
T 3kuu_A 83 GMLAAKT-LVPVLGVPVQSAALSGVDSLYSIVQMPR-GIPVGTLAIGKAGAANAALLAAQILAL-HDT----ELAGRLAH 155 (174)
T ss_dssp HHHHHTC-SSCEEEEEECCTTTTTHHHHHHHHTCCT-TSCCEECCSSHHHHHHHHHHHHHHHHT-TCH----HHHHHHHH
T ss_pred HHHHhcc-CCCEEEeeCCCCCCCCHHHHHHhhhCCC-CCeeEEEEeCCccchHHHHHHHHHHcC-CCH----HHHHHHHH
Confidence 4444433 57999999754211 111111 1 23 54333 222111234556666655444 677 89999999
Q ss_pred HHHHHHHhhcc
Q 044624 340 VKEIIDNAFRN 350 (358)
Q Consensus 340 l~~~~~~a~~~ 350 (358)
.++..++.+.+
T Consensus 156 ~r~~~~~~v~~ 166 (174)
T 3kuu_A 156 WRQSQTDDVLD 166 (174)
T ss_dssp HHHHHHHHHHT
T ss_pred HHHHHHHHHHh
Confidence 99998887754
No 86
>2xci_A KDO-transferase, 3-deoxy-D-manno-2-octulosonic acid transferase; KDTA, GSEA, glycosyltransferase superfamily B,; HET: PG4; 2.00A {Aquifex aeolicus} PDB: 2xcu_A*
Probab=45.09 E-value=54 Score=29.16 Aligned_cols=27 Identities=19% Similarity=0.319 Sum_probs=21.4
Q ss_pred CCcChHHHHHHHHHHHhCCCcEEEEEeCC
Q 044624 6 AQGHVIPFLALAHHLESTKNYTIAFVNTH 34 (358)
Q Consensus 6 ~~GH~~P~l~La~~L~~~rGh~Vt~~t~~ 34 (358)
+.|-..-..+|+++|.+ +| +|.+.+..
T Consensus 49 s~G~~~~~~~L~~~L~~-~~-~v~v~~~~ 75 (374)
T 2xci_A 49 SIGEFNTFLPILKELKR-EH-RILLTYFS 75 (374)
T ss_dssp SHHHHHHHHHHHHHHHH-HS-CEEEEESC
T ss_pred CHHHHHHHHHHHHHHHh-cC-CEEEEEcC
Confidence 44667778899999999 99 88877654
No 87
>4dzz_A Plasmid partitioning protein PARF; deviant walker BOX, DNA segregation, unknown function; HET: ADP; 1.80A {Escherichia coli} PDB: 4e03_A* 4e07_A* 4e09_A*
Probab=44.94 E-value=97 Score=24.28 Aligned_cols=32 Identities=25% Similarity=0.413 Sum_probs=26.0
Q ss_pred CCCcChHHHHHHHHHHHhCCCcEEEEEeCCcch
Q 044624 5 MAQGHVIPFLALAHHLESTKNYTIAFVNTHLNI 37 (358)
Q Consensus 5 p~~GH~~P~l~La~~L~~~rGh~Vt~~t~~~~~ 37 (358)
++.|=-.-...||..|++ +|++|.++-.....
T Consensus 11 gG~GKTt~a~~la~~la~-~g~~vlliD~D~~~ 42 (206)
T 4dzz_A 11 GGSGKTTAVINIATALSR-SGYNIAVVDTDPQM 42 (206)
T ss_dssp TTSSHHHHHHHHHHHHHH-TTCCEEEEECCTTC
T ss_pred CCccHHHHHHHHHHHHHH-CCCeEEEEECCCCC
Confidence 456667778899999999 99999999876443
No 88
>3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A*
Probab=43.90 E-value=13 Score=35.37 Aligned_cols=22 Identities=5% Similarity=0.132 Sum_probs=19.1
Q ss_pred HHHHHHHHHHhCCCcEEEEEeCC
Q 044624 12 PFLALAHHLESTKNYTIAFVNTH 34 (358)
Q Consensus 12 P~l~La~~L~~~rGh~Vt~~t~~ 34 (358)
-+-.|+++|++ +||+|+++++.
T Consensus 31 vv~~L~~aL~~-~G~~V~Vi~P~ 52 (536)
T 3vue_A 31 VLGGLPPAMAA-NGHRVMVISPR 52 (536)
T ss_dssp HHHHHHHHHHT-TTCEEEEEEEC
T ss_pred HHHHHHHHHHH-cCCeEEEEecC
Confidence 35679999999 99999999964
No 89
>1qkk_A DCTD, C4-dicarboxylate transport transcriptional regulatory protein; receiver domain, 2-component signal transduction; 1.7A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1l5z_A 1l5y_A
Probab=43.00 E-value=47 Score=24.68 Aligned_cols=68 Identities=9% Similarity=0.069 Sum_probs=42.5
Q ss_pred hcCcceEeccccccchhhhhhhhccccceEEecccCCccccHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHhhc
Q 044624 272 SHGVPINGWPLAAEQFYNSNLLGEEVGVCAEVARGMNCAVLKEHIVVKIELVMNETEKGKPMRMKDLEVKEIIDNAFR 349 (358)
Q Consensus 272 ~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~l~~ai~~ll~~~~~~~~~r~~a~~l~~~~~~a~~ 349 (358)
...+|+|++--..|.. ......+. |+--.+.+ .++.++|..+|+.++... .++...+++++...++..
T Consensus 73 ~~~~pii~ls~~~~~~-~~~~~~~~-g~~~~l~k----P~~~~~L~~~i~~~~~~~----~~~~~~~~~~~~~~~~~~ 140 (155)
T 1qkk_A 73 DPDLPMILVTGHGDIP-MAVQAIQD-GAYDFIAK----PFAADRLVQSARRAEEKR----RLVMENRSLRRAAEAASE 140 (155)
T ss_dssp CTTSCEEEEECGGGHH-HHHHHHHT-TCCEEEES----SCCHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCChH-HHHHHHhc-CCCeEEeC----CCCHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHH
Confidence 3478988886544433 33333344 65444443 689999999999999766 565555555555555443
No 90
>3pdi_B Nitrogenase MOFE cofactor biosynthesis protein NI; nitrogenase cofactor maturation, NIFB, nifdk, NIFH; HET: CZL; 2.40A {Azotobacter vinelandii}
Probab=40.90 E-value=36 Score=31.61 Aligned_cols=35 Identities=9% Similarity=-0.045 Sum_probs=27.6
Q ss_pred HHHHHHHHHhhhcCCCCCcEEEECCCCccHHHHHHHhCCceEEEc
Q 044624 92 HFKKLIIDLIDEQNGHKPLCIITDMFFGWCKEIAQEYGIFHAIFI 136 (358)
Q Consensus 92 ~l~~ll~~~~~~~~~~~pd~vV~D~~~~~~~~~A~~lgiP~v~~~ 136 (358)
.+++++++. +||++|.... ...+|+++|||++.++
T Consensus 366 ~le~~i~~~-------~pDllig~~~---~~~~a~k~gip~~~~g 400 (458)
T 3pdi_B 366 DLEHAARAG-------QAQLVIGNSH---ALASARRLGVPLLRAG 400 (458)
T ss_dssp HHHHHHHHH-------TCSEEEECTT---HHHHHHHTTCCEEECS
T ss_pred HHHHHHHhc-------CCCEEEEChh---HHHHHHHcCCCEEEec
Confidence 355667776 8999999865 5679999999998763
No 91
>3p9x_A Phosphoribosylglycinamide formyltransferase; structural genomics, PSI-biology, protein STRU initiative; 1.90A {Bacillus halodurans}
Probab=40.15 E-value=34 Score=28.06 Aligned_cols=158 Identities=15% Similarity=0.110 Sum_probs=87.4
Q ss_pred HHHHHHHHHHhhh-cCCCCCcEEEECCCCccHHHHHHHhCCceEEEcchhHHHHHHHhhhhccCCCCCCCCCccccCCCC
Q 044624 91 PHFKKLIIDLIDE-QNGHKPLCIITDMFFGWCKEIAQEYGIFHAIFIEGGGFGFACYYSLWVDLPHRNTDSDEFLLLDFP 169 (358)
Q Consensus 91 ~~l~~ll~~~~~~-~~~~~pd~vV~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~p~~~ 169 (358)
..++++++...+. .+. +..+||+|.-.......|+++|||+..+.+.. +.
T Consensus 14 snl~ali~~~~~~~l~~-eI~~Visn~~~a~v~~~A~~~gIp~~~~~~~~----------------------------~~ 64 (211)
T 3p9x_A 14 TNAEAIIQSQKAGQLPC-EVALLITDKPGAKVVERVKVHEIPVCALDPKT----------------------------YP 64 (211)
T ss_dssp HHHHHHHHHHHTTCCSS-EEEEEEESCSSSHHHHHHHTTTCCEEECCGGG----------------------------SS
T ss_pred hHHHHHHHHHHcCCCCc-EEEEEEECCCCcHHHHHHHHcCCCEEEeChhh----------------------------cC
Confidence 3466676655321 112 45789998765567789999999987753311 00
Q ss_pred CCcccCcccccCCCCCCCCCCCCCChhHHHHHhhcCCCCceEEEEeccCCCCCHHHHHHHHHHHHhCCCcEEEEecCCCC
Q 044624 170 EASTIHPVLRFTGSKAGAGKEHGISAELCKNWLDRKPCRSVLYVSFGSQDTIAVSQMVQLAMALEASGKNFIWIVRPPIG 249 (358)
Q Consensus 170 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~wld~~~~~~vvyvs~GS~~~~~~~~~~~~~~al~~~~~~~lw~~~~~~~ 249 (358)
+ ...-+.++.++|.+..+. +.|+.|-+.-++++.+ +... .++| -+.+
T Consensus 65 ~--------------------r~~~d~~~~~~l~~~~~D--liv~agy~~Il~~~~l----~~~~---~~~i-NiHp--- 111 (211)
T 3p9x_A 65 S--------------------KEAYEIEVVQQLKEKQID--FVVLAGYMRLVGPTLL----GAYE---GRIV-NIHP--- 111 (211)
T ss_dssp S--------------------HHHHHHHHHHHHHHTTCC--EEEESSCCSCCCHHHH----HHHT---TSEE-EEES---
T ss_pred c--------------------hhhhHHHHHHHHHhcCCC--EEEEeCchhhcCHHHH----hhcc---CCeE-EECC---
Confidence 0 001134566677765444 4445555555554443 3332 2322 2222
Q ss_pred CCCCCCCCcccccCCcchhhhhhcCcceEeccccc--cchhhhhhhhccccceEEecccCCccccHHHHHHHHHHH
Q 044624 250 FDINSEFRANDADGTQSALEALSHGVPINGWPLAA--EQFYNSNLLGEEVGVCAEVARGMNCAVLKEHIVVKIELV 323 (358)
Q Consensus 250 ~~~~~~~~~~wlgG~~s~~eal~~GvP~l~~P~~~--DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~l~~ai~~l 323 (358)
+..+.| .|...+..|+.+|+..-++-+.. +..+...-+..+ -+.+. ..-|.++|.+.+.++
T Consensus 112 -----SLLP~y-rG~~pi~~Ai~~G~~~tGvTvh~v~~~~D~G~Ii~Q~---~v~I~----~~dt~~~L~~rl~~~ 174 (211)
T 3p9x_A 112 -----SLLPAF-PGLHAIEQAIRANVKVTGVTIHYVDEGMDTGPIIAQE---AVSIE----EEDTLETLTTKIQAV 174 (211)
T ss_dssp -----SCTTSS-CSSCHHHHHHHTTCSEEEEEEEECCSSSSCSCEEEEE---EEECC----TTCCHHHHHHHHHHH
T ss_pred -----ccCCCC-CCccHHHHHHHcCCCeEEEEEEEEcCCCCCCCEEEEE---EEecC----CCCCHHHHHHHHHHH
Confidence 234556 89999999999999987776432 333333333222 23343 245777777776654
No 92
>3trh_A Phosphoribosylaminoimidazole carboxylase carboxyltransferase subunit; purines, pyrimidines, nucleosides, nucleotides, lyase; 2.20A {Coxiella burnetii}
Probab=39.05 E-value=1.4e+02 Score=23.40 Aligned_cols=34 Identities=6% Similarity=0.107 Sum_probs=21.3
Q ss_pred ccHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHhhc
Q 044624 311 VLKEHIVVKIELVMNETEKGKPMRMKDLEVKEIIDNAFR 349 (358)
Q Consensus 311 ~~~~~l~~ai~~ll~~~~~~~~~r~~a~~l~~~~~~a~~ 349 (358)
.++.-++..|-.+ .|+ .++++.+..++..++.+.
T Consensus 126 ~nAa~lAa~Il~~-~d~----~l~~kl~~~r~~~~~~v~ 159 (169)
T 3trh_A 126 KNAAILAAQIIAL-QDK----SIAQKLVQQRTAKRETLK 159 (169)
T ss_dssp HHHHHHHHHHHHT-TCH----HHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHcC-CCH----HHHHHHHHHHHHHHHHHH
Confidence 3455555555443 666 788888877777766553
No 93
>1o97_C Electron transferring flavoprotein beta-subunit; FAD binding; HET: AMP FAD; 1.6A {Methylophilus methylotrophus} SCOP: c.26.2.3 PDB: 1o95_C* 1o96_A* 1o94_C* 3clr_C* 3cls_C* 3clt_C* 3clu_C*
Probab=38.57 E-value=51 Score=27.98 Aligned_cols=41 Identities=12% Similarity=0.056 Sum_probs=31.4
Q ss_pred HHHHHHHHHHhhhcCCCCCcEEEECCCCc------cHHHHHHHhCCceEEEcch
Q 044624 91 PHFKKLIIDLIDEQNGHKPLCIITDMFFG------WCKEIAQEYGIFHAIFIEG 138 (358)
Q Consensus 91 ~~l~~ll~~~~~~~~~~~pd~vV~D~~~~------~~~~~A~~lgiP~v~~~~~ 138 (358)
..+.++++.. +||+|++..... -+..+|+.||+|.+...+.
T Consensus 102 ~~La~~i~~~-------~~dlVl~G~~s~d~~~~~v~p~lA~~L~~~~vt~v~~ 148 (264)
T 1o97_C 102 RILTEVIKKE-------APDMVFAGVQSSDQAYASTGISVASYLNWPHAAVVAD 148 (264)
T ss_dssp HHHHHHHHHH-------CCSEEEEESCCTTTCCCCHHHHHHHHHTCCEEEEEEE
T ss_pred HHHHHHHHhc-------CCCEEEEcCCccCCchhhHHHHHHHHhCCCcccceEE
Confidence 3445666666 799999988764 4678999999999987643
No 94
>3tqr_A Phosphoribosylglycinamide formyltransferase; purines, pyrimidines, nucleosides, nucleotides; HET: NHE; 1.97A {Coxiella burnetii} SCOP: c.65.1.0
Probab=38.39 E-value=37 Score=27.93 Aligned_cols=157 Identities=14% Similarity=0.130 Sum_probs=86.0
Q ss_pred HHHHHHHHHhhhcCCCCCcEEEECCCCccHHHHHHHhCCceEEEcchhHHHHHHHhhhhccCCCCCCCCCccccCCCCCC
Q 044624 92 HFKKLIIDLIDEQNGHKPLCIITDMFFGWCKEIAQEYGIFHAIFIEGGGFGFACYYSLWVDLPHRNTDSDEFLLLDFPEA 171 (358)
Q Consensus 92 ~l~~ll~~~~~~~~~~~pd~vV~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~p~~~~~ 171 (358)
.++++++...+..+. +..+||+|.--..+...|+++|||+..+.+.. +++
T Consensus 18 nl~all~~~~~~~~~-eI~~Vis~~~~a~~~~~A~~~gIp~~~~~~~~----------------------------~~~- 67 (215)
T 3tqr_A 18 NLQAIIGAIQKGLAI-EIRAVISNRADAYGLKRAQQADIPTHIIPHEE----------------------------FPS- 67 (215)
T ss_dssp HHHHHHHHHHTTCSE-EEEEEEESCTTCHHHHHHHHTTCCEEECCGGG----------------------------SSS-
T ss_pred HHHHHHHHHHcCCCC-EEEEEEeCCcchHHHHHHHHcCCCEEEeCccc----------------------------cCc-
Confidence 455666654321111 46789998766667789999999988763311 110
Q ss_pred cccCcccccCCCCCCCCCCCCCChhHHHHHhhcCCCCceEEEEeccCCCCCHHHHHHHHHHHHhCCCcEEEEecCCCCCC
Q 044624 172 STIHPVLRFTGSKAGAGKEHGISAELCKNWLDRKPCRSVLYVSFGSQDTIAVSQMVQLAMALEASGKNFIWIVRPPIGFD 251 (358)
Q Consensus 172 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~wld~~~~~~vvyvs~GS~~~~~~~~~~~~~~al~~~~~~~lw~~~~~~~~~ 251 (358)
...-+.++.++|.+..+. +.|+.|-+.-++++.++ .. ..++| -+.+
T Consensus 68 -------------------r~~~d~~~~~~l~~~~~D--liv~agy~~il~~~~l~----~~---~~~~i-NiHp----- 113 (215)
T 3tqr_A 68 -------------------RTDFESTLQKTIDHYDPK--LIVLAGFMRKLGKAFVS----HY---SGRMI-NIHP----- 113 (215)
T ss_dssp -------------------HHHHHHHHHHHHHTTCCS--EEEESSCCSCCCHHHHH----HT---TTSEE-EEES-----
T ss_pred -------------------hhHhHHHHHHHHHhcCCC--EEEEccchhhCCHHHHh----hc---cCCeE-EeCc-----
Confidence 001134566777765554 44445544445544433 22 22322 2222
Q ss_pred CCCCCCcccccCCcchhhhhhcCcceEeccccc--cchhhhhhhhccccceEEecccCCccccHHHHHHHHHHH
Q 044624 252 INSEFRANDADGTQSALEALSHGVPINGWPLAA--EQFYNSNLLGEEVGVCAEVARGMNCAVLKEHIVVKIELV 323 (358)
Q Consensus 252 ~~~~~~~~wlgG~~s~~eal~~GvP~l~~P~~~--DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~l~~ai~~l 323 (358)
+..+.| .|...+..|+.+|+...++-++. +..+...-+..+ -+.+. ..-|.++|.+.+.++
T Consensus 114 ---SLLP~y-rG~~pi~~Ai~~G~~~tGvTvh~v~~~~D~G~Ii~Q~---~v~I~----~~dt~~~L~~rl~~~ 176 (215)
T 3tqr_A 114 ---SLLPKY-TGLNTHERALAAGETEHGVSVHYVTEDLDAGPLICQA---RLSIT----PQDTPETLKTRVHAL 176 (215)
T ss_dssp ---SSTTTT-CSSCHHHHHHHTTCSEEEEEEEECC-CTTCSCEEEEE---EEECC----TTCCHHHHHHHHHHH
T ss_pred ---ccCCCC-CChhHHHHHHHcCCCeEEEEEEEEcCCCCCCCEEEEE---EEecC----CCCCHHHHHHHHHHH
Confidence 234455 88899999999999887776432 223333323222 23343 245777777777654
No 95
>1xmp_A PURE, phosphoribosylaminoimidazole carboxylase; purine biosynthesis, spine, lyase; 1.80A {Bacillus anthracis} SCOP: c.23.8.1
Probab=38.01 E-value=87 Score=24.55 Aligned_cols=133 Identities=17% Similarity=0.081 Sum_probs=66.3
Q ss_pred ceEEEEeccCCCCCHHHHHHHHHHHHhCCCcEEEEecCCCCCCCCC--------CCCcccc----cCCc---chhhhhhc
Q 044624 209 SVLYVSFGSQDTIAVSQMVQLAMALEASGKNFIWIVRPPIGFDINS--------EFRANDA----DGTQ---SALEALSH 273 (358)
Q Consensus 209 ~vvyvs~GS~~~~~~~~~~~~~~al~~~~~~~lw~~~~~~~~~~~~--------~~~~~wl----gG~~---s~~eal~~ 273 (358)
|.|-|-+||.. +-...++.+..|+..|.++-..+-..-...+.. ....+-+ ||.+ ++..++ .
T Consensus 12 ~~V~IimGS~S--D~~v~~~a~~~L~~~Gi~~dv~V~SaHR~p~~l~~~~~~a~~~g~~ViIa~AG~aa~LpgvvA~~-t 88 (170)
T 1xmp_A 12 SLVGVIMGSTS--DWETMKYACDILDELNIPYEKKVVSAHRTPDYMFEYAETARERGLKVIIAGAGGAAHLPGMVAAK-T 88 (170)
T ss_dssp CSEEEEESSGG--GHHHHHHHHHHHHHTTCCEEEEECCTTTSHHHHHHHHHHTTTTTCCEEEEEEESSCCHHHHHHTT-C
T ss_pred CcEEEEECcHH--HHHHHHHHHHHHHHcCCCEEEEEEeccCCHHHHHHHHHHHHhCCCcEEEEECCchhhhHHHHHhc-c
Confidence 45666666653 233445566666666766544443221110000 0000111 3333 444443 3
Q ss_pred CcceEeccccccc--hhhhh-hhhc--cccceEE-ecccCCccccHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHh
Q 044624 274 GVPINGWPLAAEQ--FYNSN-LLGE--EVGVCAE-VARGMNCAVLKEHIVVKIELVMNETEKGKPMRMKDLEVKEIIDNA 347 (358)
Q Consensus 274 GvP~l~~P~~~DQ--~~na~-~v~~--~~G~G~~-l~~~~~~~~~~~~l~~ai~~ll~~~~~~~~~r~~a~~l~~~~~~a 347 (358)
-+|+|.+|..... -..+. -++. . |+.+. +..++.+-.++.-++..|.. +.|+ .++++.+..++..++.
T Consensus 89 ~~PVIgVP~~~~~l~G~daLlSivqmP~-GvpVatV~I~~a~~~nAallAaqIla-~~d~----~l~~kl~~~r~~~~~~ 162 (170)
T 1xmp_A 89 NLPVIGVPVQSKALNGLDSLLSIVQMPG-GVPVATVAIGKAGSTNAGLLAAQILG-SFHD----DIHDALELRREAIEKD 162 (170)
T ss_dssp CSCEEEEEECCTTTTTHHHHHHHHCCCT-TCCCEECCSSHHHHHHHHHHHHHHHH-TTCH----HHHHHHHHHHHHHHHH
T ss_pred CCCEEEeeCCCCCCCcHHHHHHHhcCCC-CCeeEEEecCCcchHHHHHHHHHHHc-cCCH----HHHHHHHHHHHHHHHH
Confidence 6799999985421 11111 1122 4 55432 22211123566666666653 4677 8999999999888877
Q ss_pred hcc
Q 044624 348 FRN 350 (358)
Q Consensus 348 ~~~ 350 (358)
+.+
T Consensus 163 v~~ 165 (170)
T 1xmp_A 163 VRE 165 (170)
T ss_dssp HHC
T ss_pred HHh
Confidence 653
No 96
>2iz6_A Molybdenum cofactor carrier protein; metal transport; 1.60A {Chlamydomonas reinhardtii} PDB: 2iz5_A 2iz7_A
Probab=37.62 E-value=33 Score=27.21 Aligned_cols=22 Identities=27% Similarity=0.187 Sum_probs=18.2
Q ss_pred cCCcchhh---hhhcCcceEecccc
Q 044624 262 DGTQSALE---ALSHGVPINGWPLA 283 (358)
Q Consensus 262 gG~~s~~e---al~~GvP~l~~P~~ 283 (358)
||+||+.| ++.+++|++.+|.+
T Consensus 116 Gg~GTL~E~~~al~~~kpV~~l~~~ 140 (176)
T 2iz6_A 116 MGPGTAAEVALALKAKKPVVLLGTQ 140 (176)
T ss_dssp CCHHHHHHHHHHHHTTCCEEEESCC
T ss_pred CCccHHHHHHHHHHhCCcEEEEcCc
Confidence 88888655 57799999999983
No 97
>3gl9_A Response regulator; beta-sheet, surrounded by alpha helices, BOTH sides, signaling protein; HET: BFD; 1.80A {Thermotoga maritima} SCOP: c.23.1.0 PDB: 3dgf_C 3dge_C
Probab=37.54 E-value=45 Score=23.64 Aligned_cols=31 Identities=10% Similarity=0.099 Sum_probs=23.0
Q ss_pred CCcEEEECCCCcc--HHHHHHHh-------CCceEEEcch
Q 044624 108 KPLCIITDMFFGW--CKEIAQEY-------GIFHAIFIEG 138 (358)
Q Consensus 108 ~pd~vV~D~~~~~--~~~~A~~l-------giP~v~~~~~ 138 (358)
+||+||.|...+. +..+.+++ ++|.+.++..
T Consensus 46 ~~dlvllD~~~p~~~g~~~~~~l~~~~~~~~~pii~~s~~ 85 (122)
T 3gl9_A 46 TPDLIVLXIMMPVMDGFTVLKKLQEKEEWKRIPVIVLTAK 85 (122)
T ss_dssp CCSEEEECSCCSSSCHHHHHHHHHTSTTTTTSCEEEEESC
T ss_pred CCCEEEEeccCCCCcHHHHHHHHHhcccccCCCEEEEecC
Confidence 7999999998764 55666654 5788887654
No 98
>3zzm_A Bifunctional purine biosynthesis protein PURH; transferase, hydrolase; HET: JLN; 2.20A {Mycobacterium tuberculosis} PDB: 4a1o_A*
Probab=37.40 E-value=59 Score=30.45 Aligned_cols=88 Identities=14% Similarity=0.076 Sum_probs=49.8
Q ss_pred HHHHHHHHHHHhCCCcEEEEEeCCcchhhhhhcCCCCCCeEEEeccCCccCCCCCCCCCCCCCCCchHHHHHHHHH---h
Q 044624 11 IPFLALAHHLESTKNYTIAFVNTHLNIKKIKSSLPQSSPIHFLETPFNIIDHDLPPCTENTDSHPFDVVRKLLEAT---L 87 (358)
Q Consensus 11 ~P~l~La~~L~~~rGh~Vt~~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~ 87 (358)
.-++.+|+.|.+ .|+++. +|....+.++. .|+.+..+.- ..++|+-.+.+-.-.. ..+...+ +
T Consensus 21 ~glvelAk~L~~-lGfeI~--ATgGTak~L~e-----~GI~v~~V~~---vTgfPEil~GRVKTLH---P~ihgGiLa~r 86 (523)
T 3zzm_A 21 TGLVDLAQGLSA-AGVEII--STGSTAKTIAD-----TGIPVTPVEQ---LTGFPEVLDGRVKTLH---PRVHAGLLADL 86 (523)
T ss_dssp TTHHHHHHHHHH-TTCEEE--ECHHHHHHHHT-----TTCCCEEHHH---HHSCCCCTTTTSSSCS---HHHHHHHHCCT
T ss_pred ccHHHHHHHHHH-CCCEEE--EcchHHHHHHH-----cCCceeeccc---cCCCchhhCCccccCC---chhhhhhccCC
Confidence 347899999999 898764 56667777777 7787766541 2355554433221111 2223222 2
Q ss_pred hchHHHHHHHHHHhhhcCCCCCcEEEECCC
Q 044624 88 SFKPHFKKLIIDLIDEQNGHKPLCIITDMF 117 (358)
Q Consensus 88 ~~~~~l~~ll~~~~~~~~~~~pd~vV~D~~ 117 (358)
....+++++-+.- -.+.|+||++.+
T Consensus 87 ~~~~h~~~l~~~~-----i~~iDlVvvNLY 111 (523)
T 3zzm_A 87 RKSEHAAALEQLG-----IEAFELVVVNLY 111 (523)
T ss_dssp TSHHHHHHHHHHT-----CCCCSEEEEECC
T ss_pred CCHHHHHHHHHCC-----CCceeEEEEeCC
Confidence 2334444443321 115799999984
No 99
>1u11_A PURE (N5-carboxyaminoimidazole ribonucleotide MUT; acidophIle, protein stability, lyase; HET: CIT; 1.55A {Acetobacter aceti} SCOP: c.23.8.1 PDB: 2fwj_A* 2fw1_A* 2fwb_A 2fwa_A 2fw9_A 2fw7_A 2fw6_A 2fwp_A* 2fwi_A* 2fw8_A
Probab=36.94 E-value=1e+02 Score=24.41 Aligned_cols=134 Identities=16% Similarity=0.096 Sum_probs=72.7
Q ss_pred CceEEEEeccCCCCCHHHHHHHHHHHHhCCCcEEEEecCCCCCCCCC--------CCCcccc----cCC---cchhhhhh
Q 044624 208 RSVLYVSFGSQDTIAVSQMVQLAMALEASGKNFIWIVRPPIGFDINS--------EFRANDA----DGT---QSALEALS 272 (358)
Q Consensus 208 ~~vvyvs~GS~~~~~~~~~~~~~~al~~~~~~~lw~~~~~~~~~~~~--------~~~~~wl----gG~---~s~~eal~ 272 (358)
.+.|-|-+||.. +-...++.+..|+..|.++-..+-......+.. ....+-+ ||. -++..++
T Consensus 21 ~~~V~IimGS~S--D~~v~~~a~~~L~~~Gi~~dv~V~SaHR~p~~l~~~~~~a~~~g~~ViIa~AG~aa~LpgvvA~~- 97 (182)
T 1u11_A 21 APVVGIIMGSQS--DWETMRHADALLTELEIPHETLIVSAHRTPDRLADYARTAAERGLNVIIAGAGGAAHLPGMCAAW- 97 (182)
T ss_dssp CCSEEEEESSGG--GHHHHHHHHHHHHHTTCCEEEEECCTTTCHHHHHHHHHHTTTTTCCEEEEEEESSCCHHHHHHHH-
T ss_pred CCEEEEEECcHH--HHHHHHHHHHHHHHcCCCeEEEEEcccCCHHHHHHHHHHHHhCCCcEEEEecCchhhhHHHHHhc-
Confidence 345777777764 334456777778888887655544321111000 0001111 333 3455554
Q ss_pred cCcceEeccccccc--hhhhh-hhhc--cccceEE-ecccCCccccHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHH
Q 044624 273 HGVPINGWPLAAEQ--FYNSN-LLGE--EVGVCAE-VARGMNCAVLKEHIVVKIELVMNETEKGKPMRMKDLEVKEIIDN 346 (358)
Q Consensus 273 ~GvP~l~~P~~~DQ--~~na~-~v~~--~~G~G~~-l~~~~~~~~~~~~l~~ai~~ll~~~~~~~~~r~~a~~l~~~~~~ 346 (358)
.-+|+|.+|..... -..+. -++. . |+.+. +..++.+-.++.-++..|. -+.|+ .++++.+..++..++
T Consensus 98 t~~PVIgVP~~~~~l~G~dsLlSivqmP~-GvpVatV~I~~a~~~nAallAaqIl-a~~d~----~l~~kL~~~r~~~~~ 171 (182)
T 1u11_A 98 TRLPVLGVPVESRALKGMDSLLSIVQMPG-GVPVGTLAIGASGAKNAALLAASIL-ALYNP----ALAARLETWRALQTA 171 (182)
T ss_dssp CSSCEEEEEECCTTTTTHHHHHHHHCCCT-TSCCEECCSSHHHHHHHHHHHHHHH-GGGCH----HHHHHHHHHHHHHHH
T ss_pred cCCCEEEeeCCCCCCCcHHHHHHHhcCCC-CCceEEEecCCccchHHHHHHHHHH-ccCCH----HHHHHHHHHHHHHHH
Confidence 47899999985431 11111 1222 4 66542 2331112356666666665 34788 899999999998888
Q ss_pred hhcc
Q 044624 347 AFRN 350 (358)
Q Consensus 347 a~~~ 350 (358)
.+.+
T Consensus 172 ~v~~ 175 (182)
T 1u11_A 172 SVPN 175 (182)
T ss_dssp HSCS
T ss_pred HHHH
Confidence 7654
No 100
>1meo_A Phosophoribosylglycinamide formyltransferase; purine biosynthesis; 1.72A {Homo sapiens} SCOP: c.65.1.1 PDB: 1njs_A* 1rbm_A* 1rbq_A* 1rby_A* 1rbz_A* 1rc0_A* 1rc1_A* 1zly_A* 1zlx_A* 1mej_B 1men_A*
Probab=36.66 E-value=45 Score=27.20 Aligned_cols=157 Identities=12% Similarity=0.105 Sum_probs=83.5
Q ss_pred HHHHHHHHhhhcCCCCCcEEEECCCCccHHHHHHHhCCceEEEcchhHHHHHHHhhhhccCCCCCCCCCccccCCCCCCc
Q 044624 93 FKKLIIDLIDEQNGHKPLCIITDMFFGWCKEIAQEYGIFHAIFIEGGGFGFACYYSLWVDLPHRNTDSDEFLLLDFPEAS 172 (358)
Q Consensus 93 l~~ll~~~~~~~~~~~pd~vV~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~p~~~~~~ 172 (358)
++++++...+...+.+.-+||++.--..+...|+++|||+..+.+.. +.+
T Consensus 14 L~aLi~~~~~~~~~~~I~~Vvs~~~~~~~~~~A~~~gIp~~~~~~~~----------------------------~~~-- 63 (209)
T 1meo_A 14 LQALIDSTREPNSSAQIDIVISNKAAVAGLDKAERAGIPTRVINHKL----------------------------YKN-- 63 (209)
T ss_dssp HHHHHHHHHSTTCSCEEEEEEESSTTCHHHHHHHHTTCCEEECCGGG----------------------------SSS--
T ss_pred HHHHHHHHhcCCCCcEEEEEEeCCCChHHHHHHHHcCCCEEEECccc----------------------------cCc--
Confidence 45555554221101145689999877778889999999987753321 000
Q ss_pred ccCcccccCCCCCCCCCCCCCChhHHHHHhhcCCCCceEEEEeccCCCCCHHHHHHHHHHHHhCCCcEEEEecCCCCCCC
Q 044624 173 TIHPVLRFTGSKAGAGKEHGISAELCKNWLDRKPCRSVLYVSFGSQDTIAVSQMVQLAMALEASGKNFIWIVRPPIGFDI 252 (358)
Q Consensus 173 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~wld~~~~~~vvyvs~GS~~~~~~~~~~~~~~al~~~~~~~lw~~~~~~~~~~ 252 (358)
...-+.++.++|.+..+. +.|+.|-+.-++++. ++.+ ..++| -+.+
T Consensus 64 ------------------r~~~~~~~~~~l~~~~~D--liv~a~y~~il~~~~----l~~~---~~~~i-NiHp------ 109 (209)
T 1meo_A 64 ------------------RVEFDSAIDLVLEEFSID--IVCLAGFMRILSGPF----VQKW---NGKML-NIHP------ 109 (209)
T ss_dssp ------------------HHHHHHHHHHHHHHTTCC--EEEEESCCSCCCHHH----HHHT---TTSEE-EEES------
T ss_pred ------------------hhhhhHHHHHHHHhcCCC--EEEEcchhhhCCHHH----Hhhh---cCCEE-EEcc------
Confidence 000123455566654444 333444444445443 3332 23333 2322
Q ss_pred CCCCCcccccCCcchhhhhhcCcceEecccc-c-cchhhhhhhhccccceEEecccCCccccHHHHHHHHHHH
Q 044624 253 NSEFRANDADGTQSALEALSHGVPINGWPLA-A-EQFYNSNLLGEEVGVCAEVARGMNCAVLKEHIVVKIELV 323 (358)
Q Consensus 253 ~~~~~~~wlgG~~s~~eal~~GvP~l~~P~~-~-DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~l~~ai~~l 323 (358)
+..+.| .|.+.+..|+.+|+..-++-+. . +..+...-+... -+.+. ..-|.++|.+.+.++
T Consensus 110 --SLLP~y-rG~~pi~~Ai~~G~~~tGvTvh~v~~~~D~G~Ii~Q~---~v~I~----~~dt~~~L~~rl~~~ 172 (209)
T 1meo_A 110 --SLLPSF-KGSNAHEQALETGVTVTGCTVHFVAEDVDAGQIILQE---AVPVK----RGDTVATLSERVKLA 172 (209)
T ss_dssp --SSTTSS-CSSCHHHHHHHHTCSEEEEEEEECCC---CCCEEEEE---EEECC----TTCCHHHHHHHHHHH
T ss_pred --CcCcCC-CCccHHHHHHHcCCCcEEEEEEEECCCCcCCCEEEEE---EEecC----CCCCHHHHHHHHHHH
Confidence 234456 8899999999999998777643 2 333333333222 23343 245778888777655
No 101
>1hjr_A Holliday junction resolvase (RUVC); site-specific recombinase; 2.50A {Escherichia coli} SCOP: c.55.3.6
Probab=36.55 E-value=59 Score=25.20 Aligned_cols=46 Identities=9% Similarity=-0.026 Sum_probs=32.4
Q ss_pred hhchHHHHHHHHHHhhhcCCCCCcEEEECCCCccH---------------HHHHHHhCCceEEEcchh
Q 044624 87 LSFKPHFKKLIIDLIDEQNGHKPLCIITDMFFGWC---------------KEIAQEYGIFHAIFIEGG 139 (358)
Q Consensus 87 ~~~~~~l~~ll~~~~~~~~~~~pd~vV~D~~~~~~---------------~~~A~~lgiP~v~~~~~~ 139 (358)
......+.+++++. +||.+..+..++.- ..++.+.|||+..+.+.-
T Consensus 45 ~~i~~~l~~~i~~~-------~Pd~vaiE~vf~~~n~~s~~~lgqarGv~~~a~~~~~ipv~eytp~~ 105 (158)
T 1hjr_A 45 KLIYAGVTEIITQF-------QPDYFAIEQVFMAKNADSALKLGQARGVAIVAAVNQELPVFEYAARQ 105 (158)
T ss_dssp HHHHHHHHHHHHHH-------CCSEEEEEECCCCCCTTTHHHHHHHHHHHHHHHHTTTCCEEEEEHHH
T ss_pred HHHHHHHHHHHHHc-------CCCEEEEeecccccChHHHHHHHHHHHHHHHHHHHcCCCEEEECHHH
Confidence 34566778888888 89988888765421 245667789988876643
No 102
>4ds3_A Phosphoribosylglycinamide formyltransferase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.85A {Brucella melitensis BV}
Probab=36.20 E-value=41 Score=27.51 Aligned_cols=158 Identities=12% Similarity=0.106 Sum_probs=85.9
Q ss_pred HHHHHHHHHHhhhc-CCCCCcEEEECCCCccHHHHHHHhCCceEEEcchhHHHHHHHhhhhccCCCCCCCCCccccCCCC
Q 044624 91 PHFKKLIIDLIDEQ-NGHKPLCIITDMFFGWCKEIAQEYGIFHAIFIEGGGFGFACYYSLWVDLPHRNTDSDEFLLLDFP 169 (358)
Q Consensus 91 ~~l~~ll~~~~~~~-~~~~pd~vV~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~p~~~ 169 (358)
..++++++...+.. +. +..+||+|.-...+...|+++|||+..+.... +.
T Consensus 19 snl~all~~~~~~~l~~-~I~~Visn~~~a~~l~~A~~~gIp~~~~~~~~----------------------------~~ 69 (209)
T 4ds3_A 19 SNMEALIRAAQAPGFPA-EIVAVFSDKAEAGGLAKAEAAGIATQVFKRKD----------------------------FA 69 (209)
T ss_dssp HHHHHHHHHHTSTTCSE-EEEEEEESCTTCTHHHHHHHTTCCEEECCGGG----------------------------SS
T ss_pred HHHHHHHHHHHcCCCCc-EEEEEEECCcccHHHHHHHHcCCCEEEeCccc----------------------------cC
Confidence 34566666653210 11 45789998655567789999999987753210 00
Q ss_pred CCcccCcccccCCCCCCCCCCCCCChhHHHHHhhcCCCCceEEEEeccCCCCCHHHHHHHHHHHHhCCCcEEEEecCCCC
Q 044624 170 EASTIHPVLRFTGSKAGAGKEHGISAELCKNWLDRKPCRSVLYVSFGSQDTIAVSQMVQLAMALEASGKNFIWIVRPPIG 249 (358)
Q Consensus 170 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~wld~~~~~~vvyvs~GS~~~~~~~~~~~~~~al~~~~~~~lw~~~~~~~ 249 (358)
+ ...-+.++.++|.+..+. +.|+.|-+.-++++.++. + ..++| -+.
T Consensus 70 ~--------------------r~~~d~~~~~~l~~~~~D--liv~agy~~il~~~~l~~----~---~~~~i-NiH---- 115 (209)
T 4ds3_A 70 S--------------------KEAHEDAILAALDVLKPD--IICLAGYMRLLSGRFIAP----Y---EGRIL-NIH---- 115 (209)
T ss_dssp S--------------------HHHHHHHHHHHHHHHCCS--EEEESSCCSCCCHHHHGG----G---TTCEE-EEE----
T ss_pred C--------------------HHHHHHHHHHHHHhcCCC--EEEEeccccCcCHHHHhh----c---cCCeE-EEC----
Confidence 0 001134566677665444 444555555555544332 2 22322 222
Q ss_pred CCCCCCCCcccccCCcchhhhhhcCcceEeccccc-c-chhhhhhhhccccceEEecccCCccccHHHHHHHHHHH
Q 044624 250 FDINSEFRANDADGTQSALEALSHGVPINGWPLAA-E-QFYNSNLLGEEVGVCAEVARGMNCAVLKEHIVVKIELV 323 (358)
Q Consensus 250 ~~~~~~~~~~wlgG~~s~~eal~~GvP~l~~P~~~-D-Q~~na~~v~~~~G~G~~l~~~~~~~~~~~~l~~ai~~l 323 (358)
++..+.| .|.+.+..|+.+|+...++-++. | ..+...-+... -+.+. ..-|.++|.+.+.++
T Consensus 116 ----pSLLP~y-rG~~pi~~Ai~~G~~~tGvTvh~v~~~~D~G~Ii~Q~---~v~I~----~~dt~~~L~~r~~~~ 179 (209)
T 4ds3_A 116 ----PSLLPLF-PGLHTHQRALDAGMKLAGCTVHLVTEGMDEGPILAQA---AVPVL----DGDTAETLAARVLKA 179 (209)
T ss_dssp ----SSCTTSS-CSSCHHHHHHHTTCSEEEEEEEECCC--CCCCEEEEE---EEECC----TTCCHHHHHHHHHHH
T ss_pred ----CccccCC-CChhHHHHHHHcCCCeEEEEEEEEcCCCCCCCeEEEE---EEecC----CCCCHHHHHHHHHHH
Confidence 2334566 89999999999999987776432 2 22333322222 23343 245677777776554
No 103
>1efv_B Electron transfer flavoprotein; electron transport, glutaric acidemia type II; HET: FAD AMP; 2.10A {Homo sapiens} SCOP: c.26.2.3 PDB: 1t9g_S* 2a1u_B* 2a1t_S*
Probab=35.16 E-value=63 Score=27.26 Aligned_cols=41 Identities=12% Similarity=-0.145 Sum_probs=30.6
Q ss_pred HHHHHHHHHHhhhcCCCCCcEEEECCCCc------cHHHHHHHhCCceEEEcch
Q 044624 91 PHFKKLIIDLIDEQNGHKPLCIITDMFFG------WCKEIAQEYGIFHAIFIEG 138 (358)
Q Consensus 91 ~~l~~ll~~~~~~~~~~~pd~vV~D~~~~------~~~~~A~~lgiP~v~~~~~ 138 (358)
..+.++++.. +||+|++..... -+..+|+.||+|.+...+.
T Consensus 106 ~~La~~i~~~-------~~dlVl~G~~s~d~d~~~v~p~lA~~L~~~~vt~v~~ 152 (255)
T 1efv_B 106 RVLAKLAEKE-------KVDLVLLGKQAIDDDCNQTGQMTAGFLDWPQGTFASQ 152 (255)
T ss_dssp HHHHHHHHHH-------TCSEEEEESCCTTTCCCCHHHHHHHHHTCCEEEEEEE
T ss_pred HHHHHHHHhc-------CCCEEEEeCcccCCchhhHHHHHHHHhCCCcccceEE
Confidence 3445555555 799999988764 3678999999999987653
No 104
>3lp6_A Phosphoribosylaminoimidazole carboxylase catalyti; alpha and beta protein, structural genomics, PSI-2, protein initiative; 1.70A {Mycobacterium tuberculosis} SCOP: c.23.8.0
Probab=34.97 E-value=1.6e+02 Score=23.08 Aligned_cols=73 Identities=12% Similarity=0.178 Sum_probs=38.4
Q ss_pred chhhhhhcCcceEeccccccch--h----hhhhhhccccceEEe-cccCCccccHHHHHHHHHHHhcCCCCCHHHHHHHH
Q 044624 266 SALEALSHGVPINGWPLAAEQF--Y----NSNLLGEEVGVCAEV-ARGMNCAVLKEHIVVKIELVMNETEKGKPMRMKDL 338 (358)
Q Consensus 266 s~~eal~~GvP~l~~P~~~DQ~--~----na~~v~~~~G~G~~l-~~~~~~~~~~~~l~~ai~~ll~~~~~~~~~r~~a~ 338 (358)
++..++ .-+|+|.+|...-.. . -...+. . |+.+.. .. ++-.++.-++..|-.+ .|+ .++++.+
T Consensus 78 gvvA~~-t~~PVIgVP~~~~~l~G~daLlS~vqmp-~-GvpVatV~I--~~~~nAa~lAa~Il~~-~d~----~l~~kl~ 147 (174)
T 3lp6_A 78 GMVAAA-TPLPVIGVPVPLGRLDGLDSLLSIVQMP-A-GVPVATVSI--GGAGNAGLLAVRMLGA-ANP----QLRARIV 147 (174)
T ss_dssp HHHHHH-CSSCEEEEEECCSSGGGHHHHHHHHCCC-T-TCCCEECCT--TCHHHHHHHHHHHHHT-TCH----HHHHHHH
T ss_pred HHHHhc-cCCCEEEeeCCCCCCCCHHHHHHHhhCC-C-CCeeEEEEc--CcchHHHHHHHHHHhC-CCH----HHHHHHH
Confidence 444443 457888888753211 1 111122 3 543332 22 1345566666666444 566 7777777
Q ss_pred HHHHHHHHhh
Q 044624 339 EVKEIIDNAF 348 (358)
Q Consensus 339 ~l~~~~~~a~ 348 (358)
..+++.++.+
T Consensus 148 ~~r~~~~~~v 157 (174)
T 3lp6_A 148 AFQDRLADVV 157 (174)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 7777666554
No 105
>1o4v_A Phosphoribosylaminoimidazole mutase PURE; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; 1.77A {Thermotoga maritima} SCOP: c.23.8.1
Probab=34.94 E-value=1.3e+02 Score=23.84 Aligned_cols=16 Identities=25% Similarity=0.171 Sum_probs=7.5
Q ss_pred HHHHHHHHHHHHHHHh
Q 044624 332 PMRMKDLEVKEIIDNA 347 (358)
Q Consensus 332 ~~r~~a~~l~~~~~~a 347 (358)
.++++.+..++..++.
T Consensus 147 ~l~~kL~~~r~~~~~~ 162 (183)
T 1o4v_A 147 EIARKVKEYKERMKRE 162 (183)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH
Confidence 4555555444444433
No 106
>1efp_B ETF, protein (electron transfer flavoprotein); electron transport, glutaric acidemia type II; HET: FAD AMP; 2.60A {Paracoccus denitrificans} SCOP: c.26.2.3
Probab=34.76 E-value=62 Score=27.22 Aligned_cols=40 Identities=15% Similarity=-0.046 Sum_probs=30.2
Q ss_pred HHHHHHHHHhhhcCCCCCcEEEECCCCc------cHHHHHHHhCCceEEEcch
Q 044624 92 HFKKLIIDLIDEQNGHKPLCIITDMFFG------WCKEIAQEYGIFHAIFIEG 138 (358)
Q Consensus 92 ~l~~ll~~~~~~~~~~~pd~vV~D~~~~------~~~~~A~~lgiP~v~~~~~ 138 (358)
.+.++++.. +||+|++..... -+..+|+.||+|.+...+.
T Consensus 104 ~La~~i~~~-------~~dlVl~G~~s~d~~~~~v~p~lA~~L~~~~vt~v~~ 149 (252)
T 1efp_B 104 ILAAVARAE-------GTELIIAGKQAIDNDMNATGQMLAAILGWAQATFASK 149 (252)
T ss_dssp HHHHHHHHH-------TCSEEEEESCCTTTCCCCHHHHHHHHHTCEEEEEEEE
T ss_pred HHHHHHHhc-------CCCEEEEcCCccCCchhhHHHHHHHHhCCCccccEEE
Confidence 344555555 799999988764 4678999999999987653
No 107
>4grd_A N5-CAIR mutase, phosphoribosylaminoimidazole carboxylase catalyti; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures; 1.85A {Burkholderia cenocepacia}
Probab=34.51 E-value=64 Score=25.39 Aligned_cols=132 Identities=18% Similarity=0.114 Sum_probs=65.3
Q ss_pred CceEEEEeccCCCCCHHHHHHHHHHHHhCCCcEEEEecCCCCCCCCC--------CCCcccc----cCCc---chhhhhh
Q 044624 208 RSVLYVSFGSQDTIAVSQMVQLAMALEASGKNFIWIVRPPIGFDINS--------EFRANDA----DGTQ---SALEALS 272 (358)
Q Consensus 208 ~~vvyvs~GS~~~~~~~~~~~~~~al~~~~~~~lw~~~~~~~~~~~~--------~~~~~wl----gG~~---s~~eal~ 272 (358)
.|.|-|-+||... -...++.+..|+..|.++-..+-......++- ....+-+ ||.+ ++..+ .
T Consensus 12 ~P~V~IimGS~SD--~~v~~~a~~~l~~~gi~~ev~V~saHR~p~~l~~~~~~a~~~g~~ViIa~AG~aahLpgvvA~-~ 88 (173)
T 4grd_A 12 APLVGVLMGSSSD--WDVMKHAVAILQEFGVPYEAKVVSAHRMPDEMFDYAEKARERGLRAIIAGAGGAAHLPGMLAA-K 88 (173)
T ss_dssp SCSEEEEESSGGG--HHHHHHHHHHHHHTTCCEEEEECCTTTSHHHHHHHHHHHTTTTCSEEEEEEESSCCHHHHHHH-H
T ss_pred CCeEEEEeCcHhH--HHHHHHHHHHHHHcCCCEEEEEEccccCHHHHHHHHHHHHhcCCeEEEEeccccccchhhhee-c
Confidence 4567777777542 33446666777777777654443321110000 0000111 3333 44444 4
Q ss_pred cCcceEeccccccchh------hhhhhhccccceEEec-ccCCccccHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHH
Q 044624 273 HGVPINGWPLAAEQFY------NSNLLGEEVGVCAEVA-RGMNCAVLKEHIVVKIELVMNETEKGKPMRMKDLEVKEIID 345 (358)
Q Consensus 273 ~GvP~l~~P~~~DQ~~------na~~v~~~~G~G~~l~-~~~~~~~~~~~l~~ai~~ll~~~~~~~~~r~~a~~l~~~~~ 345 (358)
.-+|+|++|....-.. -...+ =. |+.+..- .++++-.++.-++..|-. +.|+ .++++.++.+++.+
T Consensus 89 t~~PVIgVPv~~~~l~G~dsLlSivqM-P~-Gvpvatv~i~~~~a~NAallA~~ILa-~~d~----~l~~kl~~~r~~~~ 161 (173)
T 4grd_A 89 TTVPVLGVPVASKYLKGVDSLHSIVQM-PK-GVPVATFAIGEAGAANAALFAVSILS-GNSV----DYANRLAAFRVRQN 161 (173)
T ss_dssp CCSCEEEEEECCTTTTTHHHHHHHHCC-CT-TSCCEECCSSHHHHHHHHHHHHHHHT-TSCH----HHHHHHHHHHHHHH
T ss_pred CCCCEEEEEcCCCCCCchhHHHHHHhC-CC-CCCceEEecCCcchHHHHHHHHHHHc-CCCH----HHHHHHHHHHHHHH
Confidence 4789999997543211 11111 12 4443321 111123445555555533 3677 89999988888887
Q ss_pred Hhhc
Q 044624 346 NAFR 349 (358)
Q Consensus 346 ~a~~ 349 (358)
+.+.
T Consensus 162 ~~v~ 165 (173)
T 4grd_A 162 EAAH 165 (173)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 7654
No 108
>2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824}
Probab=33.33 E-value=50 Score=26.57 Aligned_cols=120 Identities=12% Similarity=0.031 Sum_probs=66.0
Q ss_pred cChHHHHHHHHHHHhCCCcEEEEEeCCcchhhhhhcCCCCCCeEEEeccCCccC--------CCCCCCCC--CCCCCCch
Q 044624 8 GHVIPFLALAHHLESTKNYTIAFVNTHLNIKKIKSSLPQSSPIHFLETPFNIID--------HDLPPCTE--NTDSHPFD 77 (358)
Q Consensus 8 GH~~P~l~La~~L~~~rGh~Vt~~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~--------~~~~~~~~--~~~~~~~~ 77 (358)
|.+.=.+.+++.+ . .|.+|.+... .....+++. .++.++.++....+ ........ ...... .
T Consensus 36 ~~l~~~v~~a~~~-~-~~~dVIISRG-gta~~lr~~----~~iPVV~I~~s~~Dil~al~~a~~~~~kIavvg~~~~~-~ 107 (196)
T 2q5c_A 36 ASLTRASKIAFGL-Q-DEVDAIISRG-ATSDYIKKS----VSIPSISIKVTRFDTMRAVYNAKRFGNELALIAYKHSI-V 107 (196)
T ss_dssp CCHHHHHHHHHHH-T-TTCSEEEEEH-HHHHHHHTT----CSSCEEEECCCHHHHHHHHHHHGGGCSEEEEEEESSCS-S
T ss_pred CCHHHHHHHHHHh-c-CCCeEEEECC-hHHHHHHHh----CCCCEEEEcCCHhHHHHHHHHHHhhCCcEEEEeCcchh-h
Confidence 4555567888888 8 8888655544 455566553 45666665532100 00000000 000001 1
Q ss_pred HHHHHHHHHh--------hchHHHHHHHHHHhhhcCCCCCcEEEECCCCccHHHHHHHhCCceEEEcchhHHH
Q 044624 78 VVRKLLEATL--------SFKPHFKKLIIDLIDEQNGHKPLCIITDMFFGWCKEIAQEYGIFHAIFIEGGGFG 142 (358)
Q Consensus 78 ~~~~~~~~~~--------~~~~~l~~ll~~~~~~~~~~~pd~vV~D~~~~~~~~~A~~lgiP~v~~~~~~~~~ 142 (358)
....+...+. .....+++.++...+. ..++||.|.. ...+|+++|+|.+.+.+...+.
T Consensus 108 ~~~~~~~ll~~~i~~~~~~~~~e~~~~i~~l~~~----G~~vvVG~~~---~~~~A~~~Gl~~vli~sg~eSI 173 (196)
T 2q5c_A 108 DKHEIEAMLGVKIKEFLFSSEDEITTLISKVKTE----NIKIVVSGKT---VTDEAIKQGLYGETINSGEESL 173 (196)
T ss_dssp CHHHHHHHHTCEEEEEEECSGGGHHHHHHHHHHT----TCCEEEECHH---HHHHHHHTTCEEEECCCCHHHH
T ss_pred HHHHHHHHhCCceEEEEeCCHHHHHHHHHHHHHC----CCeEEECCHH---HHHHHHHcCCcEEEEecCHHHH
Confidence 1222333221 1234566666666443 6899999875 4689999999999988755443
No 109
>4ep4_A Crossover junction endodeoxyribonuclease RUVC; resolvase, hydrolase; 1.28A {Thermus thermophilus} PDB: 4ep5_A
Probab=32.91 E-value=1.3e+02 Score=23.45 Aligned_cols=46 Identities=11% Similarity=0.063 Sum_probs=33.0
Q ss_pred hhchHHHHHHHHHHhhhcCCCCCcEEEECCCCcc---------------HHHHHHHhCCceEEEcchh
Q 044624 87 LSFKPHFKKLIIDLIDEQNGHKPLCIITDMFFGW---------------CKEIAQEYGIFHAIFIEGG 139 (358)
Q Consensus 87 ~~~~~~l~~ll~~~~~~~~~~~pd~vV~D~~~~~---------------~~~~A~~lgiP~v~~~~~~ 139 (358)
......+.+++++. +||.+..+..++. +..++.+.|+|+.-+.+.-
T Consensus 49 ~~I~~~l~~~i~~~-------~Pd~vaiE~~F~~~n~~sal~lgqarGv~~la~~~~glpv~eytP~~ 109 (166)
T 4ep4_A 49 GRIHARVLEVLHRF-------RPEAVAVEEQFFYRQNELAYKVGWALGAVLVAAFEAGVPVYAYGPMQ 109 (166)
T ss_dssp HHHHHHHHHHHHHH-------CCSEEEEECCCCSSCSHHHHHHHHHHHHHHHHHHHHTCCEEEECHHH
T ss_pred HHHHHHHHHHHHHh-------CCCEEEEeehhhccChHHHHHHHHHHHHHHHHHHHcCCCEEEECHHH
Confidence 44667888999988 8998888876531 1235567899988887654
No 110
>1pno_A NAD(P) transhydrogenase subunit beta; nucleotide binding fold, oxidoreductase; HET: NAP; 2.10A {Rhodospirillum rubrum} SCOP: c.31.1.4 PDB: 1pnq_A* 1xlt_C* 2oor_C* 1ptj_C* 2oo5_C*
Probab=32.82 E-value=45 Score=26.13 Aligned_cols=25 Identities=8% Similarity=0.171 Sum_probs=21.8
Q ss_pred hHHHHHHHHHHHhCCCcEEEEEeCCc
Q 044624 10 VIPFLALAHHLESTKNYTIAFVNTHL 35 (358)
Q Consensus 10 ~~P~l~La~~L~~~rGh~Vt~~t~~~ 35 (358)
.++.-.|++.|.+ +|.+|.|..++-
T Consensus 40 Q~~v~el~~~L~~-~G~~V~faIHPV 64 (180)
T 1pno_A 40 QHALREMADVLKK-EGVEVSYAIHPV 64 (180)
T ss_dssp HHHHHHHHHHHHH-TTCEEEEEECTT
T ss_pred HHHHHHHHHHHHH-CCCeEEEEeccc
Confidence 3578899999999 999999998863
No 111
>3m6m_D Sensory/regulatory protein RPFC; RPFF, REC, enoyl-COA hydratase, lyase-transferase COMP; 2.50A {Xanthomonas campestris PV}
Probab=32.64 E-value=56 Score=23.95 Aligned_cols=31 Identities=6% Similarity=0.009 Sum_probs=22.1
Q ss_pred CCcEEEECCCCcc--HHHHHHHh---------CCceEEEcch
Q 044624 108 KPLCIITDMFFGW--CKEIAQEY---------GIFHAIFIEG 138 (358)
Q Consensus 108 ~pd~vV~D~~~~~--~~~~A~~l---------giP~v~~~~~ 138 (358)
+||+||.|...+. +..+.+++ .+|.+.++..
T Consensus 58 ~~dlvl~D~~mp~~~g~~~~~~lr~~~~~~~~~~pii~~s~~ 99 (143)
T 3m6m_D 58 DYDAVIVDLHMPGMNGLDMLKQLRVMQASGMRYTPVVVLSAD 99 (143)
T ss_dssp CCSEEEEESCCSSSCHHHHHHHHHHHHHTTCCCCCEEEEESC
T ss_pred CCCEEEEeCCCCCCCHHHHHHHHHhchhccCCCCeEEEEeCC
Confidence 7999999998764 55555544 2788777654
No 112
>1d4o_A NADP(H) transhydrogenase; nucleotide-binding fold, protein-NADP(H) complex, inverted binding of NADP(H), oxidoreductase; HET: NAP; 1.21A {Bos taurus} SCOP: c.31.1.4
Probab=32.28 E-value=46 Score=26.16 Aligned_cols=24 Identities=17% Similarity=0.205 Sum_probs=21.5
Q ss_pred hHHHHHHHHHHHhCCCcEEEEEeCC
Q 044624 10 VIPFLALAHHLESTKNYTIAFVNTH 34 (358)
Q Consensus 10 ~~P~l~La~~L~~~rGh~Vt~~t~~ 34 (358)
.++.-.|++.|.+ +|.+|.|..+|
T Consensus 39 Q~~v~el~~~L~~-~G~~V~faIHP 62 (184)
T 1d4o_A 39 QYPIADLVKMLSE-QGKKVRFGIHP 62 (184)
T ss_dssp HHHHHHHHHHHHH-TTCEEEEEECT
T ss_pred HHHHHHHHHHHHH-CCCeEEEEecc
Confidence 3578899999999 99999999886
No 113
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=31.86 E-value=27 Score=29.81 Aligned_cols=20 Identities=20% Similarity=0.371 Sum_probs=17.0
Q ss_pred HHHHHHHHhCCCcEEEEEeCC
Q 044624 14 LALAHHLESTKNYTIAFVNTH 34 (358)
Q Consensus 14 l~La~~L~~~rGh~Vt~~t~~ 34 (358)
-.|+++|.+ +||+|+.++-.
T Consensus 14 ~~L~~~L~~-~G~~V~~l~R~ 33 (298)
T 4b4o_A 14 TALTQLLNA-RGHEVTLVSRK 33 (298)
T ss_dssp HHHHHHHHH-TTCEEEEEESS
T ss_pred HHHHHHHHH-CCCEEEEEECC
Confidence 358999999 99999999753
No 114
>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}
Probab=31.67 E-value=34 Score=28.50 Aligned_cols=21 Identities=19% Similarity=0.347 Sum_probs=18.2
Q ss_pred HHHHHHHHhCCCcEEEEEeCCc
Q 044624 14 LALAHHLESTKNYTIAFVNTHL 35 (358)
Q Consensus 14 l~La~~L~~~rGh~Vt~~t~~~ 35 (358)
..+|++|++ +|++|++++.+.
T Consensus 33 ~aiA~~~~~-~Ga~V~lv~~~~ 53 (232)
T 2gk4_A 33 KIITETLLS-AGYEVCLITTKR 53 (232)
T ss_dssp HHHHHHHHH-TTCEEEEEECTT
T ss_pred HHHHHHHHH-CCCEEEEEeCCc
Confidence 468999999 999999998764
No 115
>3cg0_A Response regulator receiver modulated diguanylate with PAS/PAC sensor; signal receiver domain, diguanylate cyclase; 2.15A {Desulfovibrio desulfuricans subsp}
Probab=31.61 E-value=95 Score=22.18 Aligned_cols=32 Identities=13% Similarity=0.102 Sum_probs=22.0
Q ss_pred CCcEEEECCCCc---cHHHHHHH----hCCceEEEcchh
Q 044624 108 KPLCIITDMFFG---WCKEIAQE----YGIFHAIFIEGG 139 (358)
Q Consensus 108 ~pd~vV~D~~~~---~~~~~A~~----lgiP~v~~~~~~ 139 (358)
+||+||.|.... .+..+.++ .++|++.++...
T Consensus 54 ~~dlii~d~~~~~~~~g~~~~~~l~~~~~~~ii~ls~~~ 92 (140)
T 3cg0_A 54 RPDIALVDIMLCGALDGVETAARLAAGCNLPIIFITSSQ 92 (140)
T ss_dssp CCSEEEEESSCCSSSCHHHHHHHHHHHSCCCEEEEECCC
T ss_pred CCCEEEEecCCCCCCCHHHHHHHHHhCCCCCEEEEecCC
Confidence 799999998764 24444444 378888876543
No 116
>4ehi_A Bifunctional purine biosynthesis protein PURH; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE BTB; 2.28A {Campylobacter jejuni subsp}
Probab=31.08 E-value=53 Score=30.80 Aligned_cols=46 Identities=20% Similarity=0.212 Sum_probs=29.4
Q ss_pred HHHHHHHHHHhCCCcEEEEEeCCcchhhhhhcCCCCCCeEEEeccCCccCCCCCCCC
Q 044624 12 PFLALAHHLESTKNYTIAFVNTHLNIKKIKSSLPQSSPIHFLETPFNIIDHDLPPCT 68 (358)
Q Consensus 12 P~l~La~~L~~~rGh~Vt~~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 68 (358)
-++.+|+.|.+ .|+++. +|....+.++. .|+.+..+.- ..++|+-.
T Consensus 36 glv~~Ak~L~~-lGfeI~--ATgGTak~L~e-----~GI~v~~V~k---vTgfPEil 81 (534)
T 4ehi_A 36 GIVEFGKELEN-LGFEIL--STGGTFKLLKE-----NGIKVIEVSD---FTKSPELF 81 (534)
T ss_dssp THHHHHHHHHH-TTCEEE--ECHHHHHHHHH-----TTCCCEECBC---CC------
T ss_pred cHHHHHHHHHH-CCCEEE--EccHHHHHHHH-----CCCceeehhh---ccCCchhh
Confidence 47899999999 998764 56667777777 7787776542 24555443
No 117
>1qv9_A F420-dependent methylenetetrahydromethanopterin dehydrogenase; monomer: alpha/beta domain, helix bundle, trimer of dimers, oxidoreductase; HET: MSE; 1.54A {Methanopyrus kandleri} SCOP: c.127.1.1 PDB: 1u6i_A 1u6j_A 1u6k_A* 3iqe_A* 3iqf_A* 3iqz_A*
Probab=30.71 E-value=2.4e+02 Score=23.57 Aligned_cols=109 Identities=15% Similarity=0.066 Sum_probs=67.4
Q ss_pred hhcCCCC-ceEEEEeccCCCCCHHHHHHHHHHH----HhCCCcEEEEecCCCCCCCCCCCCcccccCCcchhhhh-hcCc
Q 044624 202 LDRKPCR-SVLYVSFGSQDTIAVSQMVQLAMAL----EASGKNFIWIVRPPIGFDINSEFRANDADGTQSALEAL-SHGV 275 (358)
Q Consensus 202 ld~~~~~-~vvyvs~GS~~~~~~~~~~~~~~al----~~~~~~~lw~~~~~~~~~~~~~~~~~wlgG~~s~~eal-~~Gv 275 (358)
||+..+| .+-...+||-.-+.+++..+...-+ ++.+-.|+.++.++...+. --..-|.+ ..|+
T Consensus 24 LDErAdRedI~vrv~gsGaKm~pe~~~~~~~~~~~~~~~~~pDfvI~isPN~a~PG-----------P~~ARE~l~~~~i 92 (283)
T 1qv9_A 24 LDERADREDVEFRVVGTSVKMDPECVEAAVEMALDIAEDFEPDFIVYGGPNPAAPG-----------PSKAREMLADSEY 92 (283)
T ss_dssp GSTTSCCSSEEEEEEECTTCCSHHHHHHHHHHHHHHHHHHCCSEEEEECSCTTSHH-----------HHHHHHHHHTSSS
T ss_pred HHhhhccCCceEEEeccCCCCCHHHHHHHHHHhhhhhhhcCCCEEEEECCCCCCCC-----------chHHHHHHHhCCC
Confidence 5665555 4666688999999998887755554 5668899989988753321 12233333 4799
Q ss_pred ceEeccccccchhh--hhhhhccccceEEecc-c-----CCccccHHHH---HHHHHHHhc
Q 044624 276 PINGWPLAAEQFYN--SNLLGEEVGVCAEVAR-G-----MNCAVLKEHI---VVKIELVMN 325 (358)
Q Consensus 276 P~l~~P~~~DQ~~n--a~~v~~~~G~G~~l~~-~-----~~~~~~~~~l---~~ai~~ll~ 325 (358)
|.+++ +|-+.- -..+.+. |.|.-+-+ | ....+++.++ ..-+-++|.
T Consensus 93 P~IvI---~D~p~~K~kd~l~~~-g~GYIivk~DpMIGArREFLDP~EMa~fNaDv~kVLa 149 (283)
T 1qv9_A 93 PAVII---GDAPGLKVKDEMEEQ-GLGYILVKPDAMLGARREFLDPVEMAIYNADLMKVLA 149 (283)
T ss_dssp CEEEE---EEGGGGGGHHHHHHT-TCEEEEETTSCCCCCCTTTCCHHHHHHHHHHHHHHHH
T ss_pred CEEEE---cCCcchhhHHHHHhc-CCcEEEEecCccccchhhccCHHHHHHhhhhHHHHHH
Confidence 99998 454422 2446666 99988754 1 2345666544 344455554
No 118
>3tl4_X Glutaminyl-tRNA synthetase; glutamine, appended domain, hinge, tRNA LIG amidotransferase, ligase; 2.30A {Saccharomyces cerevisiae}
Probab=30.65 E-value=22 Score=28.58 Aligned_cols=52 Identities=12% Similarity=0.098 Sum_probs=32.9
Q ss_pred cchhhhhhhhccccceEEecccCCccccHHHHHHHHHHHhcCCC---CCHHHHHHHHHHHHHHHH
Q 044624 285 EQFYNSNLLGEEVGVCAEVARGMNCAVLKEHIVVKIELVMNETE---KGKPMRMKDLEVKEIIDN 346 (358)
Q Consensus 285 DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~l~~ai~~ll~~~~---~~~~~r~~a~~l~~~~~~ 346 (358)
+.+..+.+=.+. |+|+.+ |+|++.++|.+.++... ..++|+ +.-.+-..+|+
T Consensus 100 ~~id~~~Fe~~c-GVGV~V--------T~EqI~~~V~~~i~~~k~~i~~~RY~-~~g~ll~~vr~ 154 (187)
T 3tl4_X 100 EASTKMGMNENS-GVGIEI--------TEDQVRNYVMQYIQENKERILTERYK-LVPGIFADVKN 154 (187)
T ss_dssp GGCCHHHHHHTT-TTTCCC--------CHHHHHHHHHHHHHHTHHHHHHHGGG-GHHHHHHHHHT
T ss_pred CCCCHHHHHHHC-CCCeEe--------CHHHHHHHHHHHHHHhHHHHHHhccc-cHHHHHHHHhc
Confidence 334444444444 888765 68999999999996531 123566 66666666665
No 119
>2q6t_A DNAB replication FORK helicase; hydrolase; 2.90A {Thermus aquaticus}
Probab=30.30 E-value=1.1e+02 Score=28.05 Aligned_cols=37 Identities=11% Similarity=0.097 Sum_probs=28.7
Q ss_pred ccCCCcChHHHHHHHHHHHhCCCcEEEEEeCCcchhh
Q 044624 3 PFMAQGHVIPFLALAHHLESTKNYTIAFVNTHLNIKK 39 (358)
Q Consensus 3 ~~p~~GH~~P~l~La~~L~~~rGh~Vt~~t~~~~~~~ 39 (358)
.-|+.|--.-.+.+|...+...|..|.+++.+.....
T Consensus 207 G~pg~GKT~lal~ia~~~a~~~g~~vl~~slE~~~~~ 243 (444)
T 2q6t_A 207 ARPAMGKTAFALTIAQNAALKEGVGVGIYSLEMPAAQ 243 (444)
T ss_dssp ECTTSCHHHHHHHHHHHHHHTTCCCEEEEESSSCHHH
T ss_pred eCCCCCHHHHHHHHHHHHHHhCCCeEEEEECCCCHHH
Confidence 3477888888899999888614899999999876543
No 120
>3f6p_A Transcriptional regulatory protein YYCF; unphosphorelated, receiver domain, cytoplasm, DNA-binding, phosphoprotein, transcription regulation; 1.95A {Bacillus subtilis} SCOP: c.23.1.1 PDB: 2zwm_A
Probab=30.09 E-value=84 Score=21.98 Aligned_cols=31 Identities=19% Similarity=0.321 Sum_probs=22.0
Q ss_pred CCcEEEECCCCcc--HHHHHHH----hCCceEEEcch
Q 044624 108 KPLCIITDMFFGW--CKEIAQE----YGIFHAIFIEG 138 (358)
Q Consensus 108 ~pd~vV~D~~~~~--~~~~A~~----lgiP~v~~~~~ 138 (358)
+||+||.|...+. +..+.++ .++|.+.++..
T Consensus 46 ~~dlii~D~~~p~~~g~~~~~~lr~~~~~~ii~~t~~ 82 (120)
T 3f6p_A 46 QPDLILLDIMLPNKDGVEVCREVRKKYDMPIIMLTAK 82 (120)
T ss_dssp CCSEEEEETTSTTTHHHHHHHHHHTTCCSCEEEEEES
T ss_pred CCCEEEEeCCCCCCCHHHHHHHHHhcCCCCEEEEECC
Confidence 7999999998774 4444443 36888777654
No 121
>1jkx_A GART;, phosphoribosylglycinamide formyltransferase; purine biosynthesis, anti-cancer agent; HET: 138; 1.60A {Escherichia coli} SCOP: c.65.1.1 PDB: 1cdd_A 1cde_A* 1c2t_A* 1grc_A 1gar_A* 2gar_A 3gar_A 1c3e_A*
Probab=30.05 E-value=71 Score=26.05 Aligned_cols=158 Identities=11% Similarity=0.113 Sum_probs=83.6
Q ss_pred HHHHHHHHHhhhcCCCCCcEEEECCCCccHHHHHHHhCCceEEEcchhHHHHHHHhhhhccCCCCCCCCCccccCCCCCC
Q 044624 92 HFKKLIIDLIDEQNGHKPLCIITDMFFGWCKEIAQEYGIFHAIFIEGGGFGFACYYSLWVDLPHRNTDSDEFLLLDFPEA 171 (358)
Q Consensus 92 ~l~~ll~~~~~~~~~~~pd~vV~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~p~~~~~ 171 (358)
.++++++...+..-..+..+||++.--..+...|+++|||++.+.+.. +.+
T Consensus 13 nl~ali~~~~~~~~~~~i~~Vis~~~~~~~~~~A~~~gIp~~~~~~~~----------------------------~~~- 63 (212)
T 1jkx_A 13 NLQAIIDACKTNKIKGTVRAVFSNKADAFGLERARQAGIATHTLIASA----------------------------FDS- 63 (212)
T ss_dssp HHHHHHHHHHTTSSSSEEEEEEESCTTCHHHHHHHHTTCEEEECCGGG----------------------------CSS-
T ss_pred HHHHHHHHHHcCCCCceEEEEEeCCCchHHHHHHHHcCCcEEEeCccc----------------------------ccc-
Confidence 456666654322101135688998766667889999999987753211 000
Q ss_pred cccCcccccCCCCCCCCCCCCCChhHHHHHhhcCCCCceEEEEeccCCCCCHHHHHHHHHHHHhCCCcEEEEecCCCCCC
Q 044624 172 STIHPVLRFTGSKAGAGKEHGISAELCKNWLDRKPCRSVLYVSFGSQDTIAVSQMVQLAMALEASGKNFIWIVRPPIGFD 251 (358)
Q Consensus 172 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~wld~~~~~~vvyvs~GS~~~~~~~~~~~~~~al~~~~~~~lw~~~~~~~~~ 251 (358)
...-+.++.++|.+..+. +.|+.|-+.-++++.+ +.+ ..+++ -+.+
T Consensus 64 -------------------r~~~~~~~~~~l~~~~~D--liv~agy~~il~~~~l----~~~---~~~~i-NiHp----- 109 (212)
T 1jkx_A 64 -------------------REAYDRELIHEIDMYAPD--VVVLAGFMRILSPAFV----SHY---AGRLL-NIHP----- 109 (212)
T ss_dssp -------------------HHHHHHHHHHHHGGGCCS--EEEESSCCSCCCHHHH----HHT---TTSEE-EEES-----
T ss_pred -------------------hhhccHHHHHHHHhcCCC--EEEEeChhhhCCHHHH----hhc---cCCEE-EEcc-----
Confidence 000123455566654443 4444454444554443 322 23332 2222
Q ss_pred CCCCCCcccccCCcchhhhhhcCcceEeccccc--cchhhhhhhhccccceEEecccCCccccHHHHHHHHHHH
Q 044624 252 INSEFRANDADGTQSALEALSHGVPINGWPLAA--EQFYNSNLLGEEVGVCAEVARGMNCAVLKEHIVVKIELV 323 (358)
Q Consensus 252 ~~~~~~~~wlgG~~s~~eal~~GvP~l~~P~~~--DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~l~~ai~~l 323 (358)
+..+.| .|.+.+..|+.+|...-++-++. +..+...-+... -+.+. ..-|.++|.+.+.++
T Consensus 110 ---SlLP~y-rG~~pi~~ai~~G~~~tGvTvh~v~~~~D~G~Ii~Q~---~v~I~----~~dt~~~L~~rl~~~ 172 (212)
T 1jkx_A 110 ---SLLPKY-PGLHTHRQALENGDEEHGTSVHFVTDELDGGPVILQA---KVPVF----AGDSEDDITARVQTQ 172 (212)
T ss_dssp ---SCTTSC-CSSCHHHHHHHTTCSEEEEEEEECCSSTTCSCEEEEE---EEECC----TTCCHHHHHHHHHHH
T ss_pred ---CcccCC-CCccHHHHHHHcCCCceEEEEEEEcccccCCCEEEEE---EEEcC----CCCCHHHHHHHHHHH
Confidence 234455 88888999999998887776432 333333333222 23333 245677777776554
No 122
>2fsv_C NAD(P) transhydrogenase subunit beta; NAD(P) transhydrogenase subunits, oxidoreductas; HET: NAD NAP; 2.30A {Rhodospirillum rubrum} SCOP: c.31.1.4 PDB: 1e3t_A* 1hzz_C* 1nm5_C* 1u28_C* 1u2d_C* 1u2g_C* 2fr8_C* 2frd_C*
Probab=30.01 E-value=51 Score=26.41 Aligned_cols=24 Identities=8% Similarity=0.153 Sum_probs=21.3
Q ss_pred hHHHHHHHHHHHhCCCcEEEEEeCC
Q 044624 10 VIPFLALAHHLESTKNYTIAFVNTH 34 (358)
Q Consensus 10 ~~P~l~La~~L~~~rGh~Vt~~t~~ 34 (358)
.+++-.|++.|.+ +|.+|.|..+|
T Consensus 63 Q~~v~el~~~L~~-~G~~V~faIHP 86 (203)
T 2fsv_C 63 QHALREMADVLKK-EGVEVSYAIHP 86 (203)
T ss_dssp HHHHHHHHHHHHH-TTCEEEEEECT
T ss_pred HHHHHHHHHHHHH-cCCeEEEEecc
Confidence 3578899999999 99999999886
No 123
>2l82_A Designed protein OR32; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, de novo protein; NMR {Artificial gene}
Probab=29.48 E-value=1.5e+02 Score=21.14 Aligned_cols=36 Identities=14% Similarity=0.269 Sum_probs=28.6
Q ss_pred ceEEEEeccCCCCCHHHHHHHHHHHHhCCCcEEEEecCCC
Q 044624 209 SVLYVSFGSQDTIAVSQMVQLAMALEASGKNFIWIVRPPI 248 (358)
Q Consensus 209 ~vvyvs~GS~~~~~~~~~~~~~~al~~~~~~~lw~~~~~~ 248 (358)
+.|||-|.| +++.+.++.+-+...|.+++..+.+..
T Consensus 2 sqifvvfss----dpeilkeivreikrqgvrvvllysdqd 37 (162)
T 2l82_A 2 SQIFVVFSS----DPEILKEIVREIKRQGVRVVLLYSDQD 37 (162)
T ss_dssp CEEEEEEES----CHHHHHHHHHHHHHTTCEEEEEECCSC
T ss_pred ceEEEEecC----CHHHHHHHHHHHHhCCeEEEEEecCch
Confidence 357777644 688889999999999999998887643
No 124
>1djl_A Transhydrogenase DIII; rossmann fold dinucleotide binding fold reverse binding of N oxidoreductase; HET: NAP; 2.00A {Homo sapiens} SCOP: c.31.1.4 PDB: 1pt9_A* 1u31_A*
Probab=29.17 E-value=54 Score=26.38 Aligned_cols=24 Identities=17% Similarity=0.200 Sum_probs=21.3
Q ss_pred hHHHHHHHHHHHhCCCcEEEEEeCC
Q 044624 10 VIPFLALAHHLESTKNYTIAFVNTH 34 (358)
Q Consensus 10 ~~P~l~La~~L~~~rGh~Vt~~t~~ 34 (358)
.++.-.|++.|.+ +|.+|.|..+|
T Consensus 62 Q~~v~el~~~L~~-~G~~V~faIHP 85 (207)
T 1djl_A 62 QYPIADLVKMLTE-QGKKVRFGIHP 85 (207)
T ss_dssp HHHHHHHHHHHHH-TTCEEEEEECT
T ss_pred hHHHHHHHHHHHH-CCCeEEEEeCc
Confidence 3577899999999 99999999886
No 125
>3gi1_A LBP, laminin-binding protein of group A streptococci; zinc-binding receptor, metal-binding, helical backbone, alpha/beta domains; 2.45A {Streptococcus pyogenes} PDB: 3hjt_A
Probab=28.75 E-value=2.4e+02 Score=24.00 Aligned_cols=30 Identities=13% Similarity=-0.027 Sum_probs=24.5
Q ss_pred CCcEEEECCCCccH--HHHHHHhCCceEEEcc
Q 044624 108 KPLCIITDMFFGWC--KEIAQEYGIFHAIFIE 137 (358)
Q Consensus 108 ~pd~vV~D~~~~~~--~~~A~~lgiP~v~~~~ 137 (358)
+..||+++...... -.+|++.|++.+.+.+
T Consensus 228 ~v~~if~e~~~~~~~~~~la~~~g~~v~~l~p 259 (286)
T 3gi1_A 228 NVKTIFAEDNVNPKIAHAIAKSTGAKVKTLSP 259 (286)
T ss_dssp TCCEEEECTTSCTHHHHHHHHTTTCEEEECCC
T ss_pred CCCEEEEeCCCChHHHHHHHHHhCCeEEEecc
Confidence 78999999987743 4689999999987654
No 126
>3kcq_A Phosphoribosylglycinamide formyltransferase; structural genomics, niaid, seattle structural center for infectious disease, ssgcid; 2.20A {Anaplasma phagocytophilum} SCOP: c.65.1.0
Probab=28.21 E-value=55 Score=26.84 Aligned_cols=44 Identities=23% Similarity=0.246 Sum_probs=28.8
Q ss_pred HHHHHHHHHHhhhc-CCCCCcEEEECCCCccHHHHHHHhCCceEEE
Q 044624 91 PHFKKLIIDLIDEQ-NGHKPLCIITDMFFGWCKEIAQEYGIFHAIF 135 (358)
Q Consensus 91 ~~l~~ll~~~~~~~-~~~~pd~vV~D~~~~~~~~~A~~lgiP~v~~ 135 (358)
..++++++...+.. +. +.-+||+|.-...+...|+++|||+..+
T Consensus 20 snl~all~~~~~~~~~~-~I~~Vis~~~~a~~l~~A~~~gIp~~~~ 64 (215)
T 3kcq_A 20 SNLEALAKAFSTEESSV-VISCVISNNAEARGLLIAQSYGIPTFVV 64 (215)
T ss_dssp HHHHHHHHHTCCC-CSE-EEEEEEESCTTCTHHHHHHHTTCCEEEC
T ss_pred HHHHHHHHHHHcCCCCc-EEEEEEeCCcchHHHHHHHHcCCCEEEe
Confidence 34566666653210 11 4578999865555778999999998775
No 127
>4hn9_A Iron complex transport system substrate-binding P; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.85A {Eubacterium eligens}
Probab=27.78 E-value=44 Score=29.23 Aligned_cols=31 Identities=13% Similarity=0.129 Sum_probs=21.4
Q ss_pred CCcEEEECCCCccHHHHHHHhCCceEEEcch
Q 044624 108 KPLCIITDMFFGWCKEIAQEYGIFHAIFIEG 138 (358)
Q Consensus 108 ~pd~vV~D~~~~~~~~~A~~lgiP~v~~~~~ 138 (358)
+||+||..........--++.|||++.+...
T Consensus 116 ~PDLIi~~~~~~~~~~~L~~~gipvv~~~~~ 146 (335)
T 4hn9_A 116 TPDVVFLPMKLKKTADTLESLGIKAVVVNPE 146 (335)
T ss_dssp CCSEEEEEGGGHHHHHHHHHTTCCEEEECCC
T ss_pred CCCEEEEeCcchhHHHHHHHcCCCEEEEcCC
Confidence 8999998764322334446779999998643
No 128
>1tmy_A CHEY protein, TMY; chemotaxis, phosphoryl transfer, signal transduction; 1.90A {Thermotoga maritima} SCOP: c.23.1.1 PDB: 2tmy_A 3tmy_A 4tmy_A 1u0s_Y
Probab=27.13 E-value=1.4e+02 Score=20.42 Aligned_cols=32 Identities=16% Similarity=0.071 Sum_probs=22.1
Q ss_pred CCcEEEECCCCcc--HHHHHHHh-----CCceEEEcchh
Q 044624 108 KPLCIITDMFFGW--CKEIAQEY-----GIFHAIFIEGG 139 (358)
Q Consensus 108 ~pd~vV~D~~~~~--~~~~A~~l-----giP~v~~~~~~ 139 (358)
+||+||.|...+. +..+.+++ ++|.+.++...
T Consensus 47 ~~dlil~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~~ 85 (120)
T 1tmy_A 47 KPDIVTMDITMPEMNGIDAIKEIMKIDPNAKIIVCSAMG 85 (120)
T ss_dssp CCSEEEEECSCGGGCHHHHHHHHHHHCTTCCEEEEECTT
T ss_pred CCCEEEEeCCCCCCcHHHHHHHHHhhCCCCeEEEEeCCC
Confidence 7999999998763 44444433 57887776543
No 129
>3c3m_A Response regulator receiver protein; structural genomics, unknown function, PSI-2, protein struct initiative; HET: MSE; 1.70A {Methanoculleus marisnigri JR1}
Probab=27.05 E-value=1e+02 Score=22.14 Aligned_cols=31 Identities=13% Similarity=0.092 Sum_probs=21.4
Q ss_pred CCcEEEECCCCcc--HHHHHHHh-------CCceEEEcch
Q 044624 108 KPLCIITDMFFGW--CKEIAQEY-------GIFHAIFIEG 138 (358)
Q Consensus 108 ~pd~vV~D~~~~~--~~~~A~~l-------giP~v~~~~~ 138 (358)
+||+||.|...+. +..+.+++ .+|.+.++..
T Consensus 47 ~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~~~ii~ls~~ 86 (138)
T 3c3m_A 47 PPDLVLLDIMMEPMDGWETLERIKTDPATRDIPVLMLTAK 86 (138)
T ss_dssp CCSEEEEESCCSSSCHHHHHHHHHHSTTTTTSCEEEEESS
T ss_pred CCCEEEEeCCCCCCCHHHHHHHHHcCcccCCCCEEEEECC
Confidence 7999999998763 45555443 5777776543
No 130
>1p9o_A Phosphopantothenoylcysteine synthetase; ligase; 2.30A {Homo sapiens} SCOP: c.72.3.1
Probab=26.80 E-value=37 Score=29.69 Aligned_cols=31 Identities=13% Similarity=0.143 Sum_probs=22.3
Q ss_pred ccCCCcChHHHHHHHHHHHhCCCcEEEEEeCCcc
Q 044624 3 PFMAQGHVIPFLALAHHLESTKNYTIAFVNTHLN 36 (358)
Q Consensus 3 ~~p~~GH~~P~l~La~~L~~~rGh~Vt~~t~~~~ 36 (358)
+..+.|.+- ..+|+++.+ +|++|||++.+..
T Consensus 60 tN~SSGkmG--~aiAe~~~~-~Ga~V~lv~g~~s 90 (313)
T 1p9o_A 60 DNFSSGRRG--ATSAEAFLA-AGYGVLFLYRARS 90 (313)
T ss_dssp EECCCCHHH--HHHHHHHHH-TTCEEEEEEETTS
T ss_pred cCCCCcHHH--HHHHHHHHH-CCCEEEEEecCCC
Confidence 334445443 357899999 9999999997643
No 131
>2etv_A Iron(III) ABC transporter, periplasmic iron-bindi protein, putative; periplasmic iron-binding protein, structural genomics; HET: MLY; 1.70A {Thermotoga maritima} SCOP: c.92.2.4
Probab=26.78 E-value=67 Score=28.22 Aligned_cols=30 Identities=13% Similarity=0.145 Sum_probs=21.0
Q ss_pred CCcEEEECCCCcc-HHHHHHHhCCceEEEcc
Q 044624 108 KPLCIITDMFFGW-CKEIAQEYGIFHAIFIE 137 (358)
Q Consensus 108 ~pd~vV~D~~~~~-~~~~A~~lgiP~v~~~~ 137 (358)
+||+||....... .....+++|||++.+..
T Consensus 96 ~PDLIi~~~~~~~~~~~~~~~~GiPvv~~~~ 126 (346)
T 2etv_A 96 QPDVVFITYVDRXTAXDIQEXTGIPVVVLSY 126 (346)
T ss_dssp CCSEEEEESCCHHHHHHHHHHHTSCEEEECC
T ss_pred CCCEEEEeCCccchHHHHHHhcCCcEEEEec
Confidence 8999998754321 22356788999999853
No 132
>2w36_A Endonuclease V; hypoxanthine, endonuclease, endonucleasev, hydrolase, inosine, DNA damage, DNA repair; HET: BRU; 2.10A {Thermotoga maritima} PDB: 2w35_A 3hd0_A
Probab=26.76 E-value=67 Score=26.55 Aligned_cols=43 Identities=19% Similarity=-0.015 Sum_probs=28.2
Q ss_pred HHHHHHHHHHhhhcCCCCCcEEEECCCCcc-------HHHHHHHhCCceEEEcch
Q 044624 91 PHFKKLIIDLIDEQNGHKPLCIITDMFFGW-------CKEIAQEYGIFHAIFIEG 138 (358)
Q Consensus 91 ~~l~~ll~~~~~~~~~~~pd~vV~D~~~~~-------~~~~A~~lgiP~v~~~~~ 138 (358)
+.+.++++.+. . +||+|++|.+... |..+...+|+|+|.+.=+
T Consensus 91 P~~l~al~~L~----~-~PdlllvDG~Gi~HpR~~GlA~HlGv~l~~PtIGVAK~ 140 (225)
T 2w36_A 91 PLFLKAWEKLR----T-KPDVVVFDGQGLAHPRKLGIASHMGLFIEIPTIGVAKS 140 (225)
T ss_dssp HHHHHHHTTCC----S-CCSEEEEESCSSSSTTSCCHHHHHHHHHTSCEEEEESS
T ss_pred HHHHHHHHhcC----C-CCCEEEEeCeEEEcCCCCCchhhhhhhhCCCEEEEEec
Confidence 34445555542 1 6999999997654 233566779999987543
No 133
>3lyu_A Putative hydrogenase; the C-terminal has AN alpha-beta fold, structural genomics, PSI-2, protein structure initiative; 2.30A {Pyrococcus furiosus}
Probab=26.12 E-value=57 Score=24.51 Aligned_cols=23 Identities=4% Similarity=0.150 Sum_probs=20.9
Q ss_pred hHHHHHHHHHHHhCCCcEEEEEeCC
Q 044624 10 VIPFLALAHHLESTKNYTIAFVNTH 34 (358)
Q Consensus 10 ~~P~l~La~~L~~~rGh~Vt~~t~~ 34 (358)
+-|++.+++.|.+ +|.+|+++ ..
T Consensus 30 iaPl~sm~~~l~~-~~~~v~l~-g~ 52 (142)
T 3lyu_A 30 IVEVYPIAKAWQE-IGNDVTTL-HV 52 (142)
T ss_dssp HHHHHHHHHHHHH-TTCEEEEE-EE
T ss_pred HHHHHHHHHHHHh-cCCcEEEE-Ee
Confidence 7899999999999 99999998 53
No 134
>2bru_C NAD(P) transhydrogenase subunit beta; paramagnetic transhydrogenase, inner membrane, membrane, oxidoreductase, transmembrane; HET: NAD NAP; NMR {Escherichia coli}
Probab=25.48 E-value=53 Score=25.81 Aligned_cols=25 Identities=12% Similarity=0.280 Sum_probs=21.9
Q ss_pred hHHHHHHHHHHHhCCCcEEEEEeCCc
Q 044624 10 VIPFLALAHHLESTKNYTIAFVNTHL 35 (358)
Q Consensus 10 ~~P~l~La~~L~~~rGh~Vt~~t~~~ 35 (358)
.++.-.|++.|.+ +|.+|.|..+|-
T Consensus 47 Q~~v~el~~~L~~-~G~~V~faIHPV 71 (186)
T 2bru_C 47 QYPVAEITEKLRA-RGINVRFGIHPV 71 (186)
T ss_dssp HHHHHHHHHHHHH-HCCEEEEEECSS
T ss_pred HHHHHHHHHHHHH-CCCeEEEEeccc
Confidence 3578899999999 999999999863
No 135
>3da8_A Probable 5'-phosphoribosylglycinamide formyltransferase PURN; glycinamide ribonucleotide transformylase, structure; 1.30A {Mycobacterium tuberculosis} PDB: 3dcj_A*
Probab=25.45 E-value=58 Score=26.70 Aligned_cols=157 Identities=13% Similarity=0.085 Sum_probs=86.6
Q ss_pred HHHHHHHHHHhhhcCCCCCcEEEECCCCccHHHHHHHhCCceEEEcchhHHHHHHHhhhhccCCCCCCCCCccccCCCCC
Q 044624 91 PHFKKLIIDLIDEQNGHKPLCIITDMFFGWCKEIAQEYGIFHAIFIEGGGFGFACYYSLWVDLPHRNTDSDEFLLLDFPE 170 (358)
Q Consensus 91 ~~l~~ll~~~~~~~~~~~pd~vV~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~p~~~~ 170 (358)
..++++++...+..+. +.-+||++.- ..+...|+++|||+..+... ..++
T Consensus 24 snl~all~~~~~~~~~-eI~~Vis~~~-a~~~~~A~~~gIp~~~~~~~----------------------------~~~~ 73 (215)
T 3da8_A 24 SLLRSLLDAAVGDYPA-RVVAVGVDRE-CRAAEIAAEASVPVFTVRLA----------------------------DHPS 73 (215)
T ss_dssp HHHHHHHHHSSTTCSE-EEEEEEESSC-CHHHHHHHHTTCCEEECCGG----------------------------GSSS
T ss_pred HHHHHHHHHHhccCCC-eEEEEEeCCc-hHHHHHHHHcCCCEEEeCcc----------------------------cccc
Confidence 3455666654211111 3568899885 34567899999998775210 0000
Q ss_pred CcccCcccccCCCCCCCCCCCCCChhHHHHHhhcCCCCceEEEEeccCCCCCHHHHHHHHHHHHhCCCcEEEEecCCCCC
Q 044624 171 ASTIHPVLRFTGSKAGAGKEHGISAELCKNWLDRKPCRSVLYVSFGSQDTIAVSQMVQLAMALEASGKNFIWIVRPPIGF 250 (358)
Q Consensus 171 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~wld~~~~~~vvyvs~GS~~~~~~~~~~~~~~al~~~~~~~lw~~~~~~~~ 250 (358)
...-+.++.++|.+..+.=+|.++||. -++++.+ +.+. .++| -+.
T Consensus 74 --------------------r~~~d~~~~~~l~~~~~Dlivlagy~~--iL~~~~l----~~~~---~~~i-NiH----- 118 (215)
T 3da8_A 74 --------------------RDAWDVAITAATAAHEPDLVVSAGFMR--ILGPQFL----SRFY---GRTL-NTH----- 118 (215)
T ss_dssp --------------------HHHHHHHHHHHHHTTCCSEEEEEECCS--CCCHHHH----HHHT---TTEE-EEE-----
T ss_pred --------------------hhhhhHHHHHHHHhhCCCEEEEcCchh--hCCHHHH----hhcc---CCeE-EeC-----
Confidence 001144567778776555445555544 4454443 3332 2322 222
Q ss_pred CCCCCCCcccccCCcchhhhhhcCcceEeccccc--cchhhhhhhhccccceEEecccCCccccHHHHHHHHHHH
Q 044624 251 DINSEFRANDADGTQSALEALSHGVPINGWPLAA--EQFYNSNLLGEEVGVCAEVARGMNCAVLKEHIVVKIELV 323 (358)
Q Consensus 251 ~~~~~~~~~wlgG~~s~~eal~~GvP~l~~P~~~--DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~l~~ai~~l 323 (358)
++..+.| .|.+.+..|+.+|+...++-++. +..+...-+..+ -+.+. ..-|.++|.+.+.++
T Consensus 119 ---pSLLP~y-rG~~pi~~Ai~~G~~~tGvTvh~v~~~lD~G~Ii~Q~---~v~I~----~~dt~~~L~~rl~~~ 182 (215)
T 3da8_A 119 ---PALLPAF-PGTHGVADALAYGVKVTGATVHLVDAGTDTGPILAQQ---PVPVL----DGDDEETLHERIKVT 182 (215)
T ss_dssp ---SSCTTSS-CSTTHHHHHHHHTCSEEEEEEEECCSSSSCSCEEEEE---EEECC----TTCCHHHHHHHHHHH
T ss_pred ---cccccCC-CCchHHHHHHHcCCCeEEEEEEEEcCCCCCCCEEEEE---EeecC----CCCCHHHHHHHHHHH
Confidence 2334566 89999999999999988776432 333333333222 23343 245788888877655
No 136
>3qxc_A Dethiobiotin synthetase; DTBS, structural genomics, ATP BIND biology, protein structure initiative, midwest center for S genomics, MCSG; HET: ATP; 1.34A {Helicobacter pylori} PDB: 3mle_A* 3qxh_A* 3qxj_A* 3qxs_A* 3qxx_A* 3qy0_A* 2qmo_A
Probab=25.44 E-value=1.3e+02 Score=25.10 Aligned_cols=45 Identities=4% Similarity=-0.068 Sum_probs=31.4
Q ss_pred hHHHHHHHHHHhhhcCCCCCcEEEECCCC---------ccHHHHHHHhCCceEEEcchh
Q 044624 90 KPHFKKLIIDLIDEQNGHKPLCIITDMFF---------GWCKEIAQEYGIFHAIFIEGG 139 (358)
Q Consensus 90 ~~~l~~ll~~~~~~~~~~~pd~vV~D~~~---------~~~~~~A~~lgiP~v~~~~~~ 139 (358)
.+.+.+.++.+.+ +.|+||+|.-. ....++|+.++.|++.+....
T Consensus 118 ~~~I~~~~~~l~~-----~~D~vlIEGagGl~~pl~~~~~~adlA~~l~~pVILV~~~~ 171 (242)
T 3qxc_A 118 TDNLTQRLHNFTK-----TYDLVIVEGAGGLCVPITLEENMLDFALKLKAKMLLISHDN 171 (242)
T ss_dssp HHHHHHHHHHGGG-----TCSEEEEECCSCTTCBSSSSCBHHHHHHHHTCEEEEEECCS
T ss_pred HHHHHHHHHHHHh-----cCCEEEEECCCCccccccccchHHHHHHHcCCCEEEEEcCC
Confidence 3455666665421 68999998731 234789999999999987654
No 137
>3md9_A Hemin-binding periplasmic protein HMUT; transport protein, alpha beta protein, rigid helical backbon substrate-free, heme transport; 1.50A {Yersinia pestis} PDB: 3nu1_A*
Probab=24.79 E-value=64 Score=26.72 Aligned_cols=29 Identities=10% Similarity=0.066 Sum_probs=21.3
Q ss_pred CCcEEEECCCCc--cHHHHHHHhCCceEEEc
Q 044624 108 KPLCIITDMFFG--WCKEIAQEYGIFHAIFI 136 (358)
Q Consensus 108 ~pd~vV~D~~~~--~~~~~A~~lgiP~v~~~ 136 (358)
+||+||...... ....--++.|||++.+.
T Consensus 59 ~PDlIi~~~~~~~~~~~~~L~~~gipvv~~~ 89 (255)
T 3md9_A 59 KPTMLLVSELAQPSLVLTQIASSGVNVVTVP 89 (255)
T ss_dssp CCSEEEEETTCSCHHHHHHHHHTTCEEEEEC
T ss_pred CCCEEEEcCCcCchhHHHHHHHcCCcEEEeC
Confidence 899999987653 23344467899999885
No 138
>2gkg_A Response regulator homolog; social motility, receiver domain, signalling, high resolutio signaling protein; 1.00A {Myxococcus xanthus} PDB: 2i6f_A 2nt4_A 2nt3_A
Probab=24.58 E-value=1.2e+02 Score=21.01 Aligned_cols=49 Identities=14% Similarity=0.031 Sum_probs=32.6
Q ss_pred hcCcceEeccccccchhhhhhhhccccceEEecccCCccccHHHHHHHHHHHhcCC
Q 044624 272 SHGVPINGWPLAAEQFYNSNLLGEEVGVCAEVARGMNCAVLKEHIVVKIELVMNET 327 (358)
Q Consensus 272 ~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~l~~ai~~ll~~~ 327 (358)
...+|++++ - .+.........+. |+--.+.+ .++.+++...|++++..+
T Consensus 78 ~~~~~ii~~-~-~~~~~~~~~~~~~-g~~~~l~k----p~~~~~l~~~i~~~~~~~ 126 (127)
T 2gkg_A 78 LKNVPIVII-G-NPDGFAQHRKLKA-HADEYVAK----PVDADQLVERAGALIGFP 126 (127)
T ss_dssp TTTSCEEEE-E-CGGGHHHHHHSTT-CCSEEEES----SCCHHHHHHHHHHHHCCC
T ss_pred ccCCCEEEE-e-cCCchhHHHHHHh-CcchheeC----CCCHHHHHHHHHHHHcCC
Confidence 357899998 3 3344444444445 66444543 689999999999998654
No 139
>1mio_B Nitrogenase molybdenum iron protein (beta chain); HET: HCA CFM CLP; 3.00A {Clostridium pasteurianum} SCOP: c.92.2.3
Probab=24.53 E-value=68 Score=29.65 Aligned_cols=33 Identities=24% Similarity=0.211 Sum_probs=25.5
Q ss_pred HHHHHHHHhhhcCCCCCcEEEECCCCccHHHHHHHhCCceEEE
Q 044624 93 FKKLIIDLIDEQNGHKPLCIITDMFFGWCKEIAQEYGIFHAIF 135 (358)
Q Consensus 93 l~~ll~~~~~~~~~~~pd~vV~D~~~~~~~~~A~~lgiP~v~~ 135 (358)
+++++++. +||++|.+.. ...+|+++|||.+.+
T Consensus 377 l~~~i~~~-------~pDl~ig~~~---~~~~a~k~gip~~~~ 409 (458)
T 1mio_B 377 VHQWIKNE-------GVDLLISNTY---GKFIAREENIPFVRF 409 (458)
T ss_dssp HHHHHHHS-------CCSEEEESGG---GHHHHHHHTCCEEEC
T ss_pred HHHHHHhc-------CCCEEEeCcc---hHHHHHHcCCCEEEe
Confidence 45555555 8999998874 567899999999876
No 140
>2a9o_A Response regulator; essential protein, YYCF/YYCG homolog, signaling protein; 1.65A {Streptococcus pneumoniae} SCOP: c.23.1.1 PDB: 1nxo_A 1nxs_A 1nxv_A 1nxw_A 1nxx_A 1nxp_A 2a9p_A 2a9q_A 1nxt_A* 2a9r_A*
Probab=24.45 E-value=1.7e+02 Score=19.91 Aligned_cols=32 Identities=19% Similarity=0.194 Sum_probs=21.9
Q ss_pred CCcEEEECCCCcc--HHHHHHH----hCCceEEEcchh
Q 044624 108 KPLCIITDMFFGW--CKEIAQE----YGIFHAIFIEGG 139 (358)
Q Consensus 108 ~pd~vV~D~~~~~--~~~~A~~----lgiP~v~~~~~~ 139 (358)
+||+||.|...+. +..+.++ -.+|.+.++...
T Consensus 45 ~~dlvl~D~~l~~~~g~~~~~~l~~~~~~~ii~~s~~~ 82 (120)
T 2a9o_A 45 QPDIIILDLMLPEIDGLEVAKTIRKTSSVPILMLSAKD 82 (120)
T ss_dssp CCSEEEECSSCSSSCHHHHHHHHHHHCCCCEEEEESCC
T ss_pred CCCEEEEeccCCCCCHHHHHHHHHhCCCCCEEEEecCC
Confidence 7999999987753 4444443 368888776543
No 141
>1srr_A SPO0F, sporulation response regulatory protein; aspartate pocket, two component system; 1.90A {Bacillus subtilis} SCOP: c.23.1.1 PDB: 1pey_A 3q15_C 2ftk_E* 1fsp_A 1nat_A 1pux_A 2fsp_A 2jvj_A 2jvk_A 2jvi_A 1f51_E
Probab=24.41 E-value=1.6e+02 Score=20.44 Aligned_cols=31 Identities=23% Similarity=0.151 Sum_probs=21.4
Q ss_pred CCcEEEECCCCcc--HHHHHHHh-----CCceEEEcch
Q 044624 108 KPLCIITDMFFGW--CKEIAQEY-----GIFHAIFIEG 138 (358)
Q Consensus 108 ~pd~vV~D~~~~~--~~~~A~~l-----giP~v~~~~~ 138 (358)
+||+||.|...+. +..+.+++ .+|.+.++..
T Consensus 47 ~~dlvl~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~ 84 (124)
T 1srr_A 47 RPDLVLLDMKIPGMDGIEILKRMKVIDENIRVIIMTAY 84 (124)
T ss_dssp CCSEEEEESCCTTCCHHHHHHHHHHHCTTCEEEEEESS
T ss_pred CCCEEEEecCCCCCCHHHHHHHHHHhCCCCCEEEEEcc
Confidence 7999999987753 44444433 5788777654
No 142
>3u7q_A Nitrogenase molybdenum-iron protein alpha chain; multiple rossmann fold domains, reductase, nitrogen fixing, oxidoreductase; HET: HCA ICS 1CL CLF; 1.00A {Azotobacter vinelandii} SCOP: c.92.2.3 PDB: 1g21_A* 1g20_A* 1fp4_A* 1m1n_A* 1l5h_A* 1m1y_A* 1m34_A* 1n2c_A* 2afh_A* 2afi_A* 2afk_A* 2min_A* 3min_A* 3k1a_A* 1h1l_A* 1qgu_A* 1qh1_A* 1qh8_A*
Probab=24.27 E-value=83 Score=29.43 Aligned_cols=36 Identities=25% Similarity=0.206 Sum_probs=27.4
Q ss_pred HHHHHHHHHHhhhcCCCCCcEEEECCCCccHHHHHHHhCCceEEEc
Q 044624 91 PHFKKLIIDLIDEQNGHKPLCIITDMFFGWCKEIAQEYGIFHAIFI 136 (358)
Q Consensus 91 ~~l~~ll~~~~~~~~~~~pd~vV~D~~~~~~~~~A~~lgiP~v~~~ 136 (358)
..+.+++++. +||++|... ....+|+++|||++.+.
T Consensus 407 ~el~~~i~~~-------~pDL~ig~~---~~~~ia~k~gIP~~~~~ 442 (492)
T 3u7q_A 407 YEFEEFVKRI-------KPDLIGSGI---KEKFIFQKMGIPFREMH 442 (492)
T ss_dssp HHHHHHHHHH-------CCSEEEECH---HHHHHHHHTTCCEEESS
T ss_pred HHHHHHHHhc-------CCcEEEeCc---chhHHHHHcCCCEEecc
Confidence 3456666666 899999965 34678999999998643
No 143
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=24.24 E-value=40 Score=27.39 Aligned_cols=18 Identities=17% Similarity=0.300 Sum_probs=15.9
Q ss_pred HHHHHHHHhCCCcEEEEEe
Q 044624 14 LALAHHLESTKNYTIAFVN 32 (358)
Q Consensus 14 l~La~~L~~~rGh~Vt~~t 32 (358)
+.+|..|++ +||+|+++=
T Consensus 15 L~aA~~La~-~G~~V~v~E 32 (336)
T 3kkj_A 15 LSAAQALTA-AGHQVHLFD 32 (336)
T ss_dssp HHHHHHHHH-TTCCEEEEC
T ss_pred HHHHHHHHH-CCCCEEEEE
Confidence 568999999 999999983
No 144
>1f9y_A HPPK, protein (6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase); pyrophosphoryl transfer, catalytic mechanism, folate, ternary complex; HET: APC HHR; 0.89A {Escherichia coli} PDB: 1eq0_A 1dy3_A* 1ex8_A* 1eqm_A* 1hka_A 1q0n_A* 1rao_A* 1rb0_A* 2f63_A 2f65_A 3h4a_A* 3ip0_A* 3ud5_A* 3ude_A* 3udv_A* 4f7v_A* 3kue_A 3hd2_A* 1f9h_A* 1g4c_A ...
Probab=24.12 E-value=1.2e+02 Score=23.46 Aligned_cols=28 Identities=25% Similarity=0.261 Sum_probs=22.4
Q ss_pred eEEEEeccCCCCCHHHHHHHHHHHHhCC
Q 044624 210 VLYVSFGSQDTIAVSQMVQLAMALEASG 237 (358)
Q Consensus 210 vvyvs~GS~~~~~~~~~~~~~~al~~~~ 237 (358)
.+|+++||-.......++..+++|.+.+
T Consensus 2 ~~~i~LGSNlGd~~~~l~~A~~~L~~~~ 29 (158)
T 1f9y_A 2 VAYIAIGSNLASPLEQVNAALKALGDIP 29 (158)
T ss_dssp EEEEEEEECSSCHHHHHHHHHHHHHTST
T ss_pred EEEEEEecCccCHHHHHHHHHHHHhcCC
Confidence 5899999998766777788888888753
No 145
>3rg8_A Phosphoribosylaminoimidazole carboxylase, PURE PR; purine biosynthesis, lyase; 1.74A {Treponema denticola} SCOP: c.23.8.0 PDB: 3rgg_A*
Probab=23.98 E-value=2.5e+02 Score=21.67 Aligned_cols=27 Identities=11% Similarity=0.101 Sum_probs=14.0
Q ss_pred CCCHHHHHHHHHHHHhC-CCcEEEEecC
Q 044624 220 TIAVSQMVQLAMALEAS-GKNFIWIVRP 246 (358)
Q Consensus 220 ~~~~~~~~~~~~al~~~-~~~~lw~~~~ 246 (358)
...++.+.++++..+.. +.+++.+...
T Consensus 40 HR~p~~~~~~~~~a~~~~~~~ViIa~AG 67 (159)
T 3rg8_A 40 HKTAEHVVSMLKEYEALDRPKLYITIAG 67 (159)
T ss_dssp TTCHHHHHHHHHHHHTSCSCEEEEEECC
T ss_pred cCCHHHHHHHHHHhhhcCCCcEEEEECC
Confidence 44555555555555543 3555555443
No 146
>2cob_A LCOR protein; MLR2, KIAA1795, helix-turn-helix, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: a.4.1.15
Probab=23.74 E-value=82 Score=20.67 Aligned_cols=30 Identities=13% Similarity=-0.001 Sum_probs=23.1
Q ss_pred CccccHHHHHHHHHHHhcCCCCCHHHHHHHHHH
Q 044624 308 NCAVLKEHIVVKIELVMNETEKGKPMRMKDLEV 340 (358)
Q Consensus 308 ~~~~~~~~l~~ai~~ll~~~~~~~~~r~~a~~l 340 (358)
....|+++|..||..|.++. .++++.|+..
T Consensus 11 yr~Yte~~L~~Ai~aVr~g~---mS~~~Aak~y 40 (70)
T 2cob_A 11 YRQYNSEILEEAISVVMSGK---MSVSKAQSIY 40 (70)
T ss_dssp SCCCCHHHHHHHHHHHHTTS---SCHHHHHHHH
T ss_pred ccccCHHHHHHHHHHHHcCC---ccHHHHHHHh
Confidence 36799999999999998873 1677777643
No 147
>3a10_A Response regulator; phosphoacceptor, signaling protein; HET: MSE PG4; 1.63A {Thermotoga maritima} PDB: 3a0r_B* 3a0u_A*
Probab=23.67 E-value=1.7e+02 Score=19.84 Aligned_cols=31 Identities=16% Similarity=-0.025 Sum_probs=20.7
Q ss_pred CCcEEEECCCCcc--HHHHHHHh-----CCceEEEcch
Q 044624 108 KPLCIITDMFFGW--CKEIAQEY-----GIFHAIFIEG 138 (358)
Q Consensus 108 ~pd~vV~D~~~~~--~~~~A~~l-----giP~v~~~~~ 138 (358)
+||+||.|...+. +..+.+++ .+|.+.++..
T Consensus 45 ~~dlvl~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~ 82 (116)
T 3a10_A 45 NYDLVILDIEMPGISGLEVAGEIRKKKKDAKIILLTAY 82 (116)
T ss_dssp CCSEEEECSCCSSSCHHHHHHHHHHHCTTCCEEEEESC
T ss_pred CCCEEEEECCCCCCCHHHHHHHHHccCCCCeEEEEECC
Confidence 7999999997753 44444433 5777776543
No 148
>3goc_A Endonuclease V; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: YES; 1.60A {Streptomyces avermitilis}
Probab=23.66 E-value=1e+02 Score=25.65 Aligned_cols=42 Identities=14% Similarity=0.021 Sum_probs=28.9
Q ss_pred HHHHHHHHHHhhhcCCCCCcEEEECCCCcc-------HHHHHHHhCCceEEEcc
Q 044624 91 PHFKKLIIDLIDEQNGHKPLCIITDMFFGW-------CKEIAQEYGIFHAIFIE 137 (358)
Q Consensus 91 ~~l~~ll~~~~~~~~~~~pd~vV~D~~~~~-------~~~~A~~lgiP~v~~~~ 137 (358)
+.+.++++.+. . +||+|++|.+-.. |..++-.+|+|.|.+.=
T Consensus 95 P~ll~al~~L~----~-~PdlllvDG~GiaHPRr~GlAsHlGv~l~~PtIGVAK 143 (237)
T 3goc_A 95 PTVLAALDALP----C-PPGLIVCDGYGVAHPRRFGLASHLGVLTGLPTIGVAK 143 (237)
T ss_dssp HHHHHHHHTSS----S-CCSEEEEESCSSCSTTSCCHHHHHHHHHCSCEEEEES
T ss_pred HHHHHHHHhcC----C-CCCEEEEeCceeecCCCcchhheeeeecCCCEEeeec
Confidence 55556666652 2 7999999997542 33466788999998754
No 149
>2qx0_A 7,8-dihydro-6-hydroxymethylpterin- pyrophosphokinase; 3-layered alpha-BATA-alpha fold, homodimer, ternary complex, transferase; HET: APC PH2; 1.80A {Yersinia pestis}
Probab=23.49 E-value=1.5e+02 Score=22.89 Aligned_cols=28 Identities=21% Similarity=0.310 Sum_probs=23.4
Q ss_pred eEEEEeccCCCCCHHHHHHHHHHHHhCC
Q 044624 210 VLYVSFGSQDTIAVSQMVQLAMALEASG 237 (358)
Q Consensus 210 vvyvs~GS~~~~~~~~~~~~~~al~~~~ 237 (358)
.+|+++||-.......++...+.|++.+
T Consensus 3 ~~~i~LGSNlGd~~~~l~~A~~~L~~~~ 30 (159)
T 2qx0_A 3 RVYIALGSNLAMPLQQVSAAREALAHLP 30 (159)
T ss_dssp EEEEEEEECSSSCHHHHHHHHHHHHTCT
T ss_pred EEEEEEeCchhhHHHHHHHHHHHHhcCC
Confidence 4899999998778888888888888753
No 150
>1mb3_A Cell division response regulator DIVK; signal transduction protein, structural proteomics in europe, spine, structural genomics; 1.41A {Caulobacter vibrioides} SCOP: c.23.1.1 PDB: 1m5u_A 1mav_A 1mb0_A 1m5t_A
Probab=23.14 E-value=1.6e+02 Score=20.29 Aligned_cols=31 Identities=19% Similarity=0.035 Sum_probs=20.0
Q ss_pred CCcEEEECCCCcc--HHHHHHHh-------CCceEEEcch
Q 044624 108 KPLCIITDMFFGW--CKEIAQEY-------GIFHAIFIEG 138 (358)
Q Consensus 108 ~pd~vV~D~~~~~--~~~~A~~l-------giP~v~~~~~ 138 (358)
+||+||.|...+. +..+.+++ .+|.+.++..
T Consensus 45 ~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~~~ii~~s~~ 84 (124)
T 1mb3_A 45 KPDLILMDIQLPEISGLEVTKWLKEDDDLAHIPVVAVTAF 84 (124)
T ss_dssp CCSEEEEESBCSSSBHHHHHHHHHHSTTTTTSCEEEEC--
T ss_pred CCCEEEEeCCCCCCCHHHHHHHHHcCccccCCcEEEEECC
Confidence 7999999987753 45544433 5677776543
No 151
>2jk1_A HUPR, hydrogenase transcriptional regulatory protein HU; nucleotide-binding, transcription regulation; 2.10A {Rhodobacter capsulatus} PDB: 2vui_B 2vuh_B
Probab=23.12 E-value=1.8e+02 Score=20.70 Aligned_cols=63 Identities=3% Similarity=-0.123 Sum_probs=35.4
Q ss_pred cCcceEeccccccchhhhhhhhccccc-eEEecccCCccccHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHH
Q 044624 273 HGVPINGWPLAAEQFYNSNLLGEEVGV-CAEVARGMNCAVLKEHIVVKIELVMNETEKGKPMRMKDLEVKEIID 345 (358)
Q Consensus 273 ~GvP~l~~P~~~DQ~~na~~v~~~~G~-G~~l~~~~~~~~~~~~l~~ai~~ll~~~~~~~~~r~~a~~l~~~~~ 345 (358)
..+|++++--..|.......+... |+ +.-.+ .++.++|..+|++++... ......+++.+..+
T Consensus 71 ~~~~ii~~s~~~~~~~~~~~~~~~-ga~~~l~K-----P~~~~~L~~~i~~~~~~~----~~~~~~~~~~~~~~ 134 (139)
T 2jk1_A 71 PETVRIIITGYTDSASMMAAINDA-GIHQFLTK-----PWHPEQLLSSARNAARMF----TLARENERLSLEMR 134 (139)
T ss_dssp TTSEEEEEESCTTCHHHHHHHHHT-TCCEEEES-----SCCHHHHHHHHHHHHHHH----HHHHHHHHHHHHHH
T ss_pred CCCcEEEEeCCCChHHHHHHHHhh-chhhhccC-----CCCHHHHHHHHHHHHHHH----HHHHHHHHHHHHHH
Confidence 457777765444433333333222 34 43333 589999999999998654 44444444444433
No 152
>1zgz_A Torcad operon transcriptional regulatory protein; two-component system, gene regulation, transcription factor, respiratory system; 1.80A {Escherichia coli} SCOP: c.23.1.1
Probab=23.03 E-value=1.4e+02 Score=20.57 Aligned_cols=31 Identities=6% Similarity=-0.097 Sum_probs=21.6
Q ss_pred CCcEEEECCCCcc--HHHHHHHh----CCceEEEcch
Q 044624 108 KPLCIITDMFFGW--CKEIAQEY----GIFHAIFIEG 138 (358)
Q Consensus 108 ~pd~vV~D~~~~~--~~~~A~~l----giP~v~~~~~ 138 (358)
+||+||.|...+. +..+.+++ .+|.+.++..
T Consensus 46 ~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~ii~~s~~ 82 (122)
T 1zgz_A 46 SVDLILLDINLPDENGLMLTRALRERSTVGIILVTGR 82 (122)
T ss_dssp CCSEEEEESCCSSSCHHHHHHHHHTTCCCEEEEEESS
T ss_pred CCCEEEEeCCCCCCChHHHHHHHHhcCCCCEEEEECC
Confidence 7999999987763 45555554 5777776544
No 153
>3mc3_A DSRE/DSRF-like family protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MLY MSE; 1.49A {Sulfolobus solfataricus}
Probab=22.66 E-value=76 Score=23.56 Aligned_cols=32 Identities=13% Similarity=-0.038 Sum_probs=24.1
Q ss_pred CcChHHHHHHHHHHHhCCCcEEEEEeCCcchhh
Q 044624 7 QGHVIPFLALAHHLESTKNYTIAFVNTHLNIKK 39 (358)
Q Consensus 7 ~GH~~P~l~La~~L~~~rGh~Vt~~t~~~~~~~ 39 (358)
......-+.||...++ .||+|+++-+.+....
T Consensus 29 ~~~~~~al~lA~~A~a-~g~eV~vFf~~dGV~~ 60 (134)
T 3mc3_A 29 LDRTYAPLFMASISAS-MEYETSVFFMIXGPXL 60 (134)
T ss_dssp THHHHHHHHHHHHHHH-TTCEEEEEECTTGGGG
T ss_pred HHHHHHHHHHHHHHHH-CCCCEEEEEEeCcHHH
Confidence 3455677888998899 9999998887655433
No 154
>3ip0_A 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; alpha beta, ATP-binding, folate biosynthesis, nucleotide-binding; HET: APC HHR HHS; 0.89A {Escherichia coli} PDB: 1eq0_A 1dy3_A* 1ex8_A* 1hka_A 1eqm_A* 1rao_A* 1rb0_A* 2f63_A 2f65_A 1q0n_A* 3ud5_A* 3ude_A* 3udv_A* 4f7v_A* 3kue_A 3hd2_A* 1f9h_A* 1g4c_A 1kbr_A 1hq2_A* ...
Probab=22.61 E-value=1.3e+02 Score=23.19 Aligned_cols=27 Identities=26% Similarity=0.290 Sum_probs=21.0
Q ss_pred eEEEEeccCCCCCHHHHHHHHHHHHhC
Q 044624 210 VLYVSFGSQDTIAVSQMVQLAMALEAS 236 (358)
Q Consensus 210 vvyvs~GS~~~~~~~~~~~~~~al~~~ 236 (358)
+.|+++||-...+...++..+..|.+.
T Consensus 2 iAyi~lGSNlGd~~~~l~~A~~~L~~~ 28 (158)
T 3ip0_A 2 VAYIAIGSNLASPLEQVNAALKALGDI 28 (158)
T ss_dssp EEEEEEEECSSCHHHHHHHHHHHHHTS
T ss_pred EEEEEEecchhhHHHHHHHHHHHHHcC
Confidence 679999999765666777777778764
No 155
>3qjg_A Epidermin biosynthesis protein EPID; structural genomics, center for structural genomics of infec diseases, csgid, oxidoreductase; HET: FMN; 2.04A {Staphylococcus aureus} SCOP: c.34.1.0
Probab=22.48 E-value=65 Score=25.44 Aligned_cols=31 Identities=19% Similarity=0.101 Sum_probs=25.0
Q ss_pred ChHHHHHHHHHHHhCCCcEEEEEeCCcchhhh
Q 044624 9 HVIPFLALAHHLESTKNYTIAFVNTHLNIKKI 40 (358)
Q Consensus 9 H~~P~l~La~~L~~~rGh~Vt~~t~~~~~~~~ 40 (358)
...=...|.+.|++ +|++|.++.++.-.+.+
T Consensus 17 aa~k~~~ll~~L~~-~g~~V~vv~T~~A~~fi 47 (175)
T 3qjg_A 17 NSINISHYIIELKS-KFDEVNVIASTNGRKFI 47 (175)
T ss_dssp GGGGHHHHHHHHTT-TCSEEEEEECTGGGGGS
T ss_pred HHHHHHHHHHHHHH-CCCEEEEEECcCHHHHh
Confidence 34447889999999 99999999998766544
No 156
>3cfy_A Putative LUXO repressor protein; structural genomics, unknown function, uncharacterized protein, signal receiver domain; 2.50A {Vibrio parahaemolyticus rimd 2210633}
Probab=22.48 E-value=1.8e+02 Score=20.72 Aligned_cols=31 Identities=19% Similarity=0.061 Sum_probs=20.9
Q ss_pred CCcEEEECCCCcc--HHHHHHHh-----CCceEEEcch
Q 044624 108 KPLCIITDMFFGW--CKEIAQEY-----GIFHAIFIEG 138 (358)
Q Consensus 108 ~pd~vV~D~~~~~--~~~~A~~l-----giP~v~~~~~ 138 (358)
+||+||.|...+. +..+.+.+ .+|.+.++..
T Consensus 48 ~~dlvllD~~l~~~~g~~l~~~l~~~~~~~~ii~ls~~ 85 (137)
T 3cfy_A 48 KPQLIILDLKLPDMSGEDVLDWINQNDIPTSVIIATAH 85 (137)
T ss_dssp CCSEEEECSBCSSSBHHHHHHHHHHTTCCCEEEEEESS
T ss_pred CCCEEEEecCCCCCCHHHHHHHHHhcCCCCCEEEEEec
Confidence 7999999987753 45554443 4677776543
No 157
>2pju_A Propionate catabolism operon regulatory protein; structural genomics, PRPR, transcriptional regulation, PSI- 2, protein structure initiative; 2.10A {Escherichia coli} SCOP: c.92.3.1
Probab=22.03 E-value=79 Score=26.09 Aligned_cols=41 Identities=12% Similarity=0.176 Sum_probs=32.0
Q ss_pred hHHHHHHHHHHhhhcCCCCCcEEEECCCCccHHHHHHHhCCceEEEcc
Q 044624 90 KPHFKKLIIDLIDEQNGHKPLCIITDMFFGWCKEIAQEYGIFHAIFIE 137 (358)
Q Consensus 90 ~~~l~~ll~~~~~~~~~~~pd~vV~D~~~~~~~~~A~~lgiP~v~~~~ 137 (358)
.+.+++.++...+. ..++||.|.. ...+|+++|+|.+.+.+
T Consensus 140 ~ee~~~~i~~l~~~----G~~vVVG~~~---~~~~A~~~Gl~~vlI~s 180 (225)
T 2pju_A 140 EEDARGQINELKAN----GTEAVVGAGL---ITDLAEEAGMTGIFIYS 180 (225)
T ss_dssp HHHHHHHHHHHHHT----TCCEEEESHH---HHHHHHHTTSEEEESSC
T ss_pred HHHHHHHHHHHHHC----CCCEEECCHH---HHHHHHHcCCcEEEECC
Confidence 45667777776544 6899999875 46899999999999884
No 158
>3aek_B Light-independent protochlorophyllide reductase S; iron/sulfur cluster, oxidoreductase, bacteriochlorophyll biosynthesis; HET: PMR; 2.30A {Rhodobacter capsulatus} PDB: 3aeq_B* 3aer_B 3aes_B* 3aeu_B 3aet_B
Probab=21.84 E-value=88 Score=29.54 Aligned_cols=26 Identities=23% Similarity=0.326 Sum_probs=20.7
Q ss_pred CCcEEEECCCCccHHHHHHHhCCceEEEc
Q 044624 108 KPLCIITDMFFGWCKEIAQEYGIFHAIFI 136 (358)
Q Consensus 108 ~pd~vV~D~~~~~~~~~A~~lgiP~v~~~ 136 (358)
+||++|.+. ....+|+++|||++.+.
T Consensus 349 ~pDL~ig~~---~~~~~a~~~giP~~~i~ 374 (525)
T 3aek_B 349 APELILGTQ---MERNIAKKLGLPCAVIS 374 (525)
T ss_dssp CCSEEEECH---HHHHHHHHHTCCEEECS
T ss_pred CCCEEEecc---hhHHHHHHcCCCEEEec
Confidence 799999765 35678899999998743
No 159
>3hv2_A Response regulator/HD domain protein; PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.50A {Pseudomonas fluorescens pf-5}
Probab=21.33 E-value=1.5e+02 Score=21.69 Aligned_cols=31 Identities=3% Similarity=-0.015 Sum_probs=21.4
Q ss_pred CCcEEEECCCCcc--HHHHHHHh-----CCceEEEcch
Q 044624 108 KPLCIITDMFFGW--CKEIAQEY-----GIFHAIFIEG 138 (358)
Q Consensus 108 ~pd~vV~D~~~~~--~~~~A~~l-----giP~v~~~~~ 138 (358)
+||+||.|..... +..+.+++ ++|++.++..
T Consensus 58 ~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~ 95 (153)
T 3hv2_A 58 EVDLVISAAHLPQMDGPTLLARIHQQYPSTTRILLTGD 95 (153)
T ss_dssp CCSEEEEESCCSSSCHHHHHHHHHHHCTTSEEEEECCC
T ss_pred CCCEEEEeCCCCcCcHHHHHHHHHhHCCCCeEEEEECC
Confidence 7999999998764 44444432 5788777654
No 160
>2xdq_B Light-independent protochlorophyllide reductase S; oxidoreductase, DPOR, (bacterio)chlorophyll biosynthesis, photosynthesis; 2.40A {Thermosynechococcus elongatus}
Probab=21.32 E-value=71 Score=30.04 Aligned_cols=35 Identities=11% Similarity=0.214 Sum_probs=25.2
Q ss_pred HHHHHHHHHhhhcCCCCCcEEEECCCCccHHHHHHHhCCceEEEc
Q 044624 92 HFKKLIIDLIDEQNGHKPLCIITDMFFGWCKEIAQEYGIFHAIFI 136 (358)
Q Consensus 92 ~l~~ll~~~~~~~~~~~pd~vV~D~~~~~~~~~A~~lgiP~v~~~ 136 (358)
.+.+++++. +||++|.+.. ...+|+++|||++.+.
T Consensus 363 el~~~i~~~-------~pDl~ig~~~---~r~~a~k~gip~~~i~ 397 (511)
T 2xdq_B 363 VVGDAIARV-------EPAAIFGTQM---ERHVGKRLNIPCGVIA 397 (511)
T ss_dssp HHHHHHHHH-------CCSEEEECHH---HHHHHHHHTCCEEECS
T ss_pred HHHHHHHhc-------CCCEEEeccc---hHHHHHhcCCCeEecc
Confidence 345555555 7999987653 5567899999988754
No 161
>3qbc_A 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; protein-inhibitor complex, ferredoxin-like fold; HET: B55; 1.65A {Staphylococcus aureus}
Probab=21.18 E-value=1.5e+02 Score=23.00 Aligned_cols=27 Identities=22% Similarity=0.160 Sum_probs=21.9
Q ss_pred eEEEEeccCCCCCHHHHHHHHHHHHhC
Q 044624 210 VLYVSFGSQDTIAVSQMVQLAMALEAS 236 (358)
Q Consensus 210 vvyvs~GS~~~~~~~~~~~~~~al~~~ 236 (358)
.+|+++||-.......++..++.|.+.
T Consensus 6 ~v~i~LGSNlGd~~~~l~~A~~~L~~~ 32 (161)
T 3qbc_A 6 QAYLGLGSNIGDRESQLNDAIKILNEY 32 (161)
T ss_dssp EEEEEEEECSSSHHHHHHHHHHHHHHS
T ss_pred EEEEEEecCccCHHHHHHHHHHHHhcC
Confidence 699999999876667777778888774
No 162
>2r7a_A Bacterial heme binding protein; periplasmic binding protein, heme transport, transport protein; HET: HEM; 2.05A {Shigella dysenteriae} PDB: 2rg7_A
Probab=21.08 E-value=84 Score=25.98 Aligned_cols=29 Identities=14% Similarity=0.013 Sum_probs=20.2
Q ss_pred CCcEEEECCCCc--cHHHHHHHhCCceEEEc
Q 044624 108 KPLCIITDMFFG--WCKEIAQEYGIFHAIFI 136 (358)
Q Consensus 108 ~pd~vV~D~~~~--~~~~~A~~lgiP~v~~~ 136 (358)
+||+||...... ....--++.|||++.+.
T Consensus 59 ~PDLIi~~~~~~~~~~~~~L~~~gipvv~~~ 89 (256)
T 2r7a_A 59 RPDSVITWQDAGPQIVLDQLRAQKVNVVTLP 89 (256)
T ss_dssp CCSEEEEETTCSCHHHHHHHHHTTCEEEEEC
T ss_pred CCCEEEEcCCCCCHHHHHHHHHcCCcEEEec
Confidence 899999876432 23344467899998874
No 163
>2q8p_A Iron-regulated surface determinant E; helical backbone metal receptor superfamily, metal transport; HET: HEM; 1.95A {Staphylococcus aureus subsp} PDB: 2q8q_A*
Probab=21.08 E-value=66 Score=26.67 Aligned_cols=30 Identities=7% Similarity=0.016 Sum_probs=20.3
Q ss_pred CCcEEEECCCCc-cHHHHHHHhCCceEEEcc
Q 044624 108 KPLCIITDMFFG-WCKEIAQEYGIFHAIFIE 137 (358)
Q Consensus 108 ~pd~vV~D~~~~-~~~~~A~~lgiP~v~~~~ 137 (358)
+||+||...... .....-++.|||++.+..
T Consensus 60 ~PDLIi~~~~~~~~~~~~L~~~gipvv~~~~ 90 (260)
T 2q8p_A 60 KPTHVLSVSTIKDEMQPFYKQLNMKGYFYDF 90 (260)
T ss_dssp CCSEEEEEGGGHHHHHHHHHHHTSCCEEECC
T ss_pred CCCEEEecCccCHHHHHHHHHcCCcEEEecC
Confidence 899999865322 123445678999988754
No 164
>1xhf_A DYE resistance, aerobic respiration control protein ARCA; two-component system, gene regulation, transcription factor, anoxic redox control; 2.15A {Escherichia coli} SCOP: c.23.1.1 PDB: 1xhe_A
Probab=20.97 E-value=1.9e+02 Score=19.92 Aligned_cols=31 Identities=13% Similarity=0.035 Sum_probs=21.2
Q ss_pred CCcEEEECCCCcc--HHHHHHHh----CCceEEEcch
Q 044624 108 KPLCIITDMFFGW--CKEIAQEY----GIFHAIFIEG 138 (358)
Q Consensus 108 ~pd~vV~D~~~~~--~~~~A~~l----giP~v~~~~~ 138 (358)
+||+||.|...+. +..+.+++ .+|.+.++..
T Consensus 47 ~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~ii~~s~~ 83 (123)
T 1xhf_A 47 DINLVIMDINLPGKNGLLLARELREQANVALMFLTGR 83 (123)
T ss_dssp CCSEEEECSSCSSSCHHHHHHHHHHHCCCEEEEEESC
T ss_pred CCCEEEEcCCCCCCCHHHHHHHHHhCCCCcEEEEECC
Confidence 7999999987753 44444443 6777776654
No 165
>3pdi_A Nitrogenase MOFE cofactor biosynthesis protein NI; nitrogenase cofactor maturation, NIFB, nifdk, NIFH; HET: CZL; 2.40A {Azotobacter vinelandii}
Probab=20.80 E-value=74 Score=29.67 Aligned_cols=35 Identities=9% Similarity=-0.166 Sum_probs=26.1
Q ss_pred HHHHHHHHHhhhcCCCCCcEEEECCCCccHHHHHHHhCCceEEEc
Q 044624 92 HFKKLIIDLIDEQNGHKPLCIITDMFFGWCKEIAQEYGIFHAIFI 136 (358)
Q Consensus 92 ~l~~ll~~~~~~~~~~~pd~vV~D~~~~~~~~~A~~lgiP~v~~~ 136 (358)
.+.+++++. +||++|.... ...+|+++|||.+.+.
T Consensus 392 el~~~i~~~-------~pDL~ig~~~---~~~~a~k~gIP~~~~~ 426 (483)
T 3pdi_A 392 VLLKTVDEY-------QADILIAGGR---NMYTALKGRVPFLDIN 426 (483)
T ss_dssp HHHHHHHHT-------TCSEEECCGG---GHHHHHHTTCCBCCCC
T ss_pred HHHHHHHhc-------CCCEEEECCc---hhHHHHHcCCCEEEec
Confidence 445666665 8999998653 5578999999987653
No 166
>3av3_A Phosphoribosylglycinamide formyltransferase; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; HET: MSE; 1.70A {Geobacillus kaustophilus}
Probab=20.79 E-value=1.2e+02 Score=24.68 Aligned_cols=142 Identities=13% Similarity=0.101 Sum_probs=76.5
Q ss_pred CCcEEEECCCCccHHHHHHHhCCceEEEcchhHHHHHHHhhhhccCCCCCCCCCccccCCCCCCcccCcccccCCCCCCC
Q 044624 108 KPLCIITDMFFGWCKEIAQEYGIFHAIFIEGGGFGFACYYSLWVDLPHRNTDSDEFLLLDFPEASTIHPVLRFTGSKAGA 187 (358)
Q Consensus 108 ~pd~vV~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~p~~~~~~~~~p~~~~~~~~~~~ 187 (358)
..-+||++.--......|+++|||+..+.+.. +.+
T Consensus 32 ~I~~Vit~~~~~~v~~~A~~~gIp~~~~~~~~----------------------------~~~----------------- 66 (212)
T 3av3_A 32 RVALLVCDRPGAKVIERAARENVPAFVFSPKD----------------------------YPS----------------- 66 (212)
T ss_dssp EEEEEEESSTTCHHHHHHHHTTCCEEECCGGG----------------------------SSS-----------------
T ss_pred eEEEEEeCCCCcHHHHHHHHcCCCEEEeCccc----------------------------ccc-----------------
Confidence 34678888655566788999999987653211 000
Q ss_pred CCCCCCChhHHHHHhhcCCCCceEEEEeccCCCCCHHHHHHHHHHHHhCCCcEEEEecCCCCCCCCCCCCcccccCCcch
Q 044624 188 GKEHGISAELCKNWLDRKPCRSVLYVSFGSQDTIAVSQMVQLAMALEASGKNFIWIVRPPIGFDINSEFRANDADGTQSA 267 (358)
Q Consensus 188 ~~~~~~~~~~~~~wld~~~~~~vvyvs~GS~~~~~~~~~~~~~~al~~~~~~~lw~~~~~~~~~~~~~~~~~wlgG~~s~ 267 (358)
...-+.++.++|.+..+. +.|..|=+.-++++.+ +.+ +.++| -+.+ +..+.| .|.+.+
T Consensus 67 ---~~~~~~~~~~~l~~~~~D--liv~a~y~~il~~~~l----~~~---~~~~i-NiHp--------SLLP~y-rG~~pi 124 (212)
T 3av3_A 67 ---KAAFESEILRELKGRQID--WIALAGYMRLIGPTLL----SAY---EGKIV-NIHP--------SLLPAF-PGKDAI 124 (212)
T ss_dssp ---HHHHHHHHHHHHHHTTCC--EEEESSCCSCCCHHHH----HHT---TTCEE-EEES--------SCTTSS-CSTTHH
T ss_pred ---hhhhHHHHHHHHHhcCCC--EEEEchhhhhCCHHHH----hhh---cCCEE-EEec--------CcCCCC-CCcCHH
Confidence 000123455566654444 3334444444454443 332 23332 2322 234566 889999
Q ss_pred hhhhhcCcceEeccccc--cchhhhhhhhccccceEEecccCCccccHHHHHHHHHHH
Q 044624 268 LEALSHGVPINGWPLAA--EQFYNSNLLGEEVGVCAEVARGMNCAVLKEHIVVKIELV 323 (358)
Q Consensus 268 ~eal~~GvP~l~~P~~~--DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~l~~ai~~l 323 (358)
..|+.+|+..-++-++. +..+...-+... -+.+. ..-|.++|.+.+.++
T Consensus 125 ~~Ai~~G~~~tGvTvh~v~~~~D~G~Ii~Q~---~v~I~----~~dt~~~L~~r~~~~ 175 (212)
T 3av3_A 125 GQAYRAGVSETGVTVHYVDEGMDTGPVIAQR---VVPIV----PGEPIEALEERIHQV 175 (212)
T ss_dssp HHHHHHTCSEEEEEEEECCSSSSCSCEEEEE---EEECC----TTCCHHHHHHHHHHH
T ss_pred HHHHHcCCCeEEEEEEEECCCCCCCCEEEEE---EEecC----CCCCHHHHHHHHHHH
Confidence 99999999888776432 333333333222 23343 245677777666544
No 167
>3auf_A Glycinamide ribonucleotide transformylase 1; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; 2.07A {Symbiobacterium toebii}
Probab=20.62 E-value=1.2e+02 Score=25.06 Aligned_cols=142 Identities=15% Similarity=0.140 Sum_probs=78.1
Q ss_pred CCcEEEECCCCccHHHHHHHhCCceEEEcchhHHHHHHHhhhhccCCCCCCCCCccccCCCCCCcccCcccccCCCCCCC
Q 044624 108 KPLCIITDMFFGWCKEIAQEYGIFHAIFIEGGGFGFACYYSLWVDLPHRNTDSDEFLLLDFPEASTIHPVLRFTGSKAGA 187 (358)
Q Consensus 108 ~pd~vV~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~p~~~~~~~~~p~~~~~~~~~~~ 187 (358)
+..+||++.--..+...|+++|||++.+.+.. +..
T Consensus 51 ~I~~Vvt~~~~~~~~~~A~~~gIp~~~~~~~~----------------------------~~~----------------- 85 (229)
T 3auf_A 51 RVAVVISDRADAYGLERARRAGVDALHMDPAA----------------------------YPS----------------- 85 (229)
T ss_dssp EEEEEEESSTTCHHHHHHHHTTCEEEECCGGG----------------------------SSS-----------------
T ss_pred eEEEEEcCCCchHHHHHHHHcCCCEEEECccc----------------------------ccc-----------------
Confidence 35678888655556788999999987653311 000
Q ss_pred CCCCCCChhHHHHHhhcCCCCceEEEEeccCCCCCHHHHHHHHHHHHhCCCcEEEEecCCCCCCCCCCCCcccccCCcch
Q 044624 188 GKEHGISAELCKNWLDRKPCRSVLYVSFGSQDTIAVSQMVQLAMALEASGKNFIWIVRPPIGFDINSEFRANDADGTQSA 267 (358)
Q Consensus 188 ~~~~~~~~~~~~~wld~~~~~~vvyvs~GS~~~~~~~~~~~~~~al~~~~~~~lw~~~~~~~~~~~~~~~~~wlgG~~s~ 267 (358)
...-+.++.++|.+..+. +.|..|-+.-++++.+ +.+ ..++| -+.+ +..+.| .|.+.+
T Consensus 86 ---r~~~~~~~~~~l~~~~~D--liv~agy~~IL~~~~l----~~~---~~~~i-NiHp--------SLLP~y-rG~~pi 143 (229)
T 3auf_A 86 ---RTAFDAALAERLQAYGVD--LVCLAGYMRLVRGPML----TAF---PNRIL-NIHP--------SLLPAF-PGLEAQ 143 (229)
T ss_dssp ---HHHHHHHHHHHHHHTTCS--EEEESSCCSCCCHHHH----HHS---TTCEE-EEES--------SCTTSS-CSSCHH
T ss_pred ---hhhccHHHHHHHHhcCCC--EEEEcChhHhCCHHHH----hhc---cCCEE-EEcc--------CcCcCC-CCcCHH
Confidence 000123455666655444 4444444444554443 322 23333 2222 234456 889999
Q ss_pred hhhhhcCcceEeccccc--cchhhhhhhhccccceEEecccCCccccHHHHHHHHHHH
Q 044624 268 LEALSHGVPINGWPLAA--EQFYNSNLLGEEVGVCAEVARGMNCAVLKEHIVVKIELV 323 (358)
Q Consensus 268 ~eal~~GvP~l~~P~~~--DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~l~~ai~~l 323 (358)
..|+.+|+..-++-++. +..+...-+... -+.+. ..-|.++|.+.+.++
T Consensus 144 ~~Ai~~G~~~tGvTvh~v~~~~D~G~Ii~Q~---~v~I~----~~dt~~~L~~rl~~~ 194 (229)
T 3auf_A 144 RQALEHGVKVAGCTVHFVTAGVDEGPIILQA---AVPVL----EGDTVEDLRRRILAE 194 (229)
T ss_dssp HHHHHHTCSEEEEEEEECCSSTTCSCEEEEE---EEECC----TTCCHHHHHHHHHHH
T ss_pred HHHHHcCCCeEEEEEEEECCCCcCCCEEEEE---EEecC----CCCCHHHHHHHHHHH
Confidence 99999999887776432 333333333222 23343 245777777777654
No 168
>1cbk_A Protein (7,8-dihydro-6-hydroxymethylpterin- pyrophosphokinase); transferase; HET: ROI; 2.02A {Haemophilus influenzae} SCOP: d.58.30.1
Probab=20.45 E-value=1.5e+02 Score=23.01 Aligned_cols=27 Identities=22% Similarity=0.306 Sum_probs=21.9
Q ss_pred eEEEEeccCCCCCHHHHHHHHHHHHhC
Q 044624 210 VLYVSFGSQDTIAVSQMVQLAMALEAS 236 (358)
Q Consensus 210 vvyvs~GS~~~~~~~~~~~~~~al~~~ 236 (358)
.+|+++||-.......++...+.|++.
T Consensus 3 ~~~i~LGSNlGd~~~~l~~A~~~L~~~ 29 (160)
T 1cbk_A 3 TAYIALGSNLNTPVEQLHAALKAISQL 29 (160)
T ss_dssp EEEEEEEECSSCHHHHHHHHHHHHHTS
T ss_pred EEEEEEeccchHHHHHHHHHHHHHhhC
Confidence 489999999876667778888888875
No 169
>4as2_A Phosphorylcholine phosphatase; hydrolase, HAD superfamily, alkylammonium compounds; HET: BTB; 2.12A {Pseudomonas aeruginosa} PDB: 4as3_A*
Probab=20.21 E-value=72 Score=28.01 Aligned_cols=24 Identities=8% Similarity=0.043 Sum_probs=21.4
Q ss_pred hHHHHHHHHHHHhCCCcEEEEEeCC
Q 044624 10 VIPFLALAHHLESTKNYTIAFVNTH 34 (358)
Q Consensus 10 ~~P~l~La~~L~~~rGh~Vt~~t~~ 34 (358)
..+|+.|.+.|++ +|++|.++|..
T Consensus 145 ~~~~~~l~~~l~~-~G~~v~ivSas 168 (327)
T 4as2_A 145 FSGQRELYNKLME-NGIEVYVISAA 168 (327)
T ss_dssp CHHHHHHHHHHHH-TTCEEEEEEEE
T ss_pred CHHHHHHHHHHHH-CCCEEEEEeCC
Confidence 3569999999999 99999999974
Done!