Query 044626
Match_columns 429
No_of_seqs 191 out of 2553
Neff 9.1
Searched_HMMs 29240
Date Mon Mar 25 08:39:11 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/044626.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/044626hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1yp2_A Glucose-1-phosphate ade 100.0 5.9E-59 2E-63 469.2 38.9 424 2-429 21-451 (451)
2 3brk_X Glucose-1-phosphate ade 100.0 5.3E-50 1.8E-54 400.1 34.0 355 1-393 12-390 (420)
3 3st8_A Bifunctional protein GL 100.0 2.7E-48 9.3E-53 395.9 31.8 389 2-429 13-444 (501)
4 2ggo_A 401AA long hypothetical 100.0 5.8E-46 2E-50 368.9 27.9 355 2-429 1-389 (401)
5 1hm9_A GLMU, UDP-N-acetylgluco 100.0 4.5E-45 1.5E-49 369.7 32.4 374 3-429 13-435 (468)
6 4fce_A Bifunctional protein GL 100.0 6.4E-44 2.2E-48 360.4 28.8 383 1-429 8-430 (459)
7 2v0h_A Bifunctional protein GL 100.0 1.8E-42 6.2E-47 349.5 32.0 380 1-429 5-427 (456)
8 3juk_A UDP-glucose pyrophospho 100.0 1.6E-35 5.4E-40 279.7 21.1 245 1-273 2-272 (281)
9 4ecm_A Glucose-1-phosphate thy 100.0 1.9E-33 6.3E-38 263.7 22.7 235 1-273 24-261 (269)
10 2ux8_A Glucose-1-phosphate uri 100.0 4.6E-32 1.6E-36 257.9 20.8 244 1-273 14-281 (297)
11 2e3d_A UTP--glucose-1-phosphat 100.0 9.3E-32 3.2E-36 256.5 21.2 243 2-273 9-283 (302)
12 2pa4_A UTP-glucose-1-phosphate 100.0 1.2E-31 4.1E-36 257.9 21.0 247 2-273 13-284 (323)
13 1tzf_A Glucose-1-phosphate cyt 100.0 3E-31 1E-35 247.3 22.1 237 1-273 2-252 (259)
14 4evw_A Nucleoside-diphosphate- 100.0 9.4E-32 3.2E-36 249.7 17.4 228 3-268 1-244 (255)
15 3pnn_A Conserved domain protei 100.0 1.3E-31 4.5E-36 255.1 18.7 251 1-271 5-291 (303)
16 1fxo_A Glucose-1-phosphate thy 100.0 1.1E-30 3.9E-35 247.2 23.1 233 1-270 2-240 (293)
17 1lvw_A Glucose-1-phosphate thy 100.0 1.5E-30 5E-35 246.5 23.0 233 1-270 3-241 (295)
18 1mc3_A Glucose-1-phosphate thy 100.0 8.5E-31 2.9E-35 248.2 19.2 234 1-271 3-242 (296)
19 2qh5_A PMI, ALGA, mannose-6-ph 100.0 2.4E-29 8.1E-34 240.2 17.9 241 1-269 4-282 (308)
20 2x65_A Mannose-1-phosphate gua 99.9 1.9E-27 6.6E-32 229.0 15.3 234 2-265 2-270 (336)
21 1jyk_A LICC protein, CTP:phosp 99.9 5E-27 1.7E-31 217.9 14.0 219 1-271 25-252 (254)
22 3oam_A 3-deoxy-manno-octuloson 99.9 3.9E-26 1.3E-30 211.6 18.9 238 1-272 2-250 (252)
23 2cu2_A Putative mannose-1-phos 99.9 1.1E-26 3.7E-31 223.9 13.9 232 1-266 2-266 (337)
24 3tqd_A 3-deoxy-manno-octuloson 99.9 5.8E-24 2E-28 196.6 21.2 235 1-268 9-255 (256)
25 3k8d_A 3-deoxy-manno-octuloson 99.9 1.1E-23 3.7E-28 195.6 19.6 235 1-269 18-263 (264)
26 4fcu_A 3-deoxy-manno-octuloson 99.9 2E-22 6.9E-27 186.0 20.9 236 3-272 3-251 (253)
27 2y6p_A 3-deoxy-manno-octuloson 99.9 1.7E-22 5.9E-27 185.0 19.7 225 1-269 2-231 (234)
28 1h7e_A 3-deoxy-manno-octuloson 99.9 2.4E-22 8.3E-27 185.3 17.7 229 1-271 2-239 (245)
29 1vic_A 3-deoxy-manno-octuloson 99.9 3.7E-21 1.3E-25 179.3 22.1 244 1-273 2-255 (262)
30 2xme_A CTP-inositol-1-phosphat 99.9 3.9E-22 1.3E-26 182.5 13.0 212 1-268 18-231 (232)
31 3f1c_A Putative 2-C-methyl-D-e 99.9 4.4E-21 1.5E-25 177.0 15.9 225 2-273 4-236 (246)
32 2vsh_A TARI, 2-C-methyl-D-eryt 99.9 4.8E-21 1.6E-25 175.5 15.8 223 2-270 3-234 (236)
33 2iu8_A LPXD, UDP-3-O-[3-hydrox 99.8 1.4E-21 4.8E-26 191.1 10.5 265 117-429 12-319 (374)
34 2yc3_A 2-C-methyl-D-erythritol 99.8 4.1E-20 1.4E-24 168.4 14.3 219 1-270 4-225 (228)
35 1vgw_A 4-diphosphocytidyl-2C-m 99.8 4.8E-19 1.6E-23 161.7 19.6 216 1-269 6-228 (231)
36 2xwl_A 2-C-methyl-D-erythritol 99.8 2E-19 6.9E-24 163.2 17.0 215 1-271 2-220 (223)
37 2icy_A Probable UTP-glucose-1- 99.8 3.2E-19 1.1E-23 176.9 18.6 243 1-270 79-373 (469)
38 1ezi_A CMP-N-acetylneuraminic 99.8 5.8E-19 2E-23 160.8 15.5 215 2-270 5-224 (228)
39 2dpw_A Hypothetical protein TT 99.8 1.3E-19 4.6E-24 165.6 5.4 201 1-263 2-231 (232)
40 1i52_A 4-diphosphocytidyl-2-C- 99.8 1E-17 3.6E-22 153.3 17.0 220 1-272 7-230 (236)
41 3q80_A 2-C-methyl-D-erythritol 99.7 7.1E-17 2.4E-21 146.8 19.7 216 2-269 8-229 (231)
42 2i5k_A UTP--glucose-1-phosphat 99.7 8.6E-17 3E-21 160.4 20.9 199 1-221 92-323 (488)
43 1vpa_A 2-C-methyl-D-erythritol 99.7 4.6E-17 1.6E-21 148.7 17.4 212 2-271 14-229 (234)
44 1qwj_A Cytidine monophospho-N- 99.7 1.3E-17 4.6E-22 151.9 12.9 217 1-272 3-223 (229)
45 2px7_A 2-C-methyl-D-erythritol 99.7 4E-17 1.4E-21 149.5 13.8 206 2-271 26-233 (236)
46 2waw_A MOBA relate protein; un 99.7 1.3E-16 4.4E-21 141.9 16.0 189 1-270 5-196 (199)
47 3rsb_A Adenosylcobinamide-phos 99.7 2.1E-17 7.3E-22 146.8 10.5 128 2-151 1-135 (196)
48 2wee_A MOBA-related protein; u 99.7 6.5E-17 2.2E-21 143.6 12.8 113 2-137 6-120 (197)
49 3eh0_A UDP-3-O-[3-hydroxymyris 99.6 3.8E-15 1.3E-19 143.5 17.6 175 254-428 74-290 (341)
50 3pmo_A UDP-3-O-[3-hydroxymyris 99.6 3.7E-15 1.3E-19 144.9 17.6 60 367-427 245-305 (372)
51 4eqy_A Acyl-[acyl-carrier-prot 99.6 1.3E-15 4.5E-20 143.1 13.6 150 277-429 22-194 (283)
52 3hsq_A Acyl-[acyl-carrier-prot 99.6 3.4E-15 1.2E-19 138.4 16.1 146 275-428 4-171 (259)
53 4e79_A UDP-3-O-acylglucosamine 99.6 6.2E-15 2.1E-19 142.7 17.9 60 367-427 228-288 (357)
54 3r0s_A Acyl-[acyl-carrier-prot 99.6 3.1E-15 1E-19 139.2 14.8 148 275-429 8-177 (266)
55 1j2z_A Acyl-[acyl-carrier-prot 99.6 2.1E-15 7.1E-20 140.5 13.6 147 276-429 6-173 (270)
56 3d5n_A Q97W15_sulso; NESG, SSR 99.6 1.8E-15 6.1E-20 134.5 11.7 184 1-270 2-189 (197)
57 2e8b_A Probable molybdopterin- 99.6 8.1E-16 2.8E-20 137.2 9.2 177 2-269 15-198 (201)
58 3r8y_A 2,3,4,5-tetrahydropyrid 99.6 1.7E-15 5.8E-20 138.9 10.4 138 242-413 39-195 (240)
59 1jv1_A Glcnac1P uridyltransfer 99.6 1.6E-14 5.4E-19 144.7 17.0 204 1-221 102-344 (505)
60 3t57_A UDP-N-acetylglucosamine 99.6 8.3E-15 2.8E-19 139.0 13.9 63 367-429 133-201 (305)
61 2qia_A UDP-N-acetylglucosamine 99.6 1.3E-14 4.5E-19 134.8 14.4 148 279-429 7-177 (262)
62 4e6u_A Acyl-[acyl-carrier-prot 99.6 1.6E-14 5.4E-19 134.4 14.8 147 276-429 12-179 (265)
63 3tv0_A Dynactin subunit 6; LEF 99.6 1.5E-14 5.3E-19 128.0 12.7 133 281-429 10-147 (194)
64 3ixc_A Hexapeptide transferase 99.6 1.9E-14 6.4E-19 127.2 12.3 119 278-428 28-156 (191)
65 1xhd_A Putative acetyltransfer 99.6 2.1E-14 7.3E-19 124.7 12.3 117 280-428 9-134 (173)
66 1qre_A Carbonic anhydrase; bet 99.6 1.8E-14 6E-19 132.6 12.1 137 264-429 39-207 (247)
67 3r1w_A Carbonic anhydrase; bet 99.5 3.1E-14 1.1E-18 125.5 12.6 118 280-429 16-149 (189)
68 1v3w_A Ferripyochelin binding 99.5 4.3E-14 1.5E-18 122.8 13.1 116 281-428 8-132 (173)
69 3r3r_A Ferripyochelin binding 99.5 4.7E-14 1.6E-18 124.2 13.2 117 280-428 12-144 (187)
70 4eqy_A Acyl-[acyl-carrier-prot 99.5 5E-14 1.7E-18 132.2 13.9 99 305-413 70-191 (283)
71 1e5k_A Molybdopterin-guanine d 99.5 4.3E-14 1.5E-18 125.9 12.7 109 1-137 6-116 (201)
72 3r0s_A Acyl-[acyl-carrier-prot 99.5 8.2E-14 2.8E-18 129.5 14.3 99 305-413 52-174 (266)
73 4e6u_A Acyl-[acyl-carrier-prot 99.5 1.1E-13 3.9E-18 128.6 14.5 46 368-413 130-176 (265)
74 1j2z_A Acyl-[acyl-carrier-prot 99.5 1.1E-13 3.8E-18 128.8 13.8 128 281-418 23-174 (270)
75 3mqg_A Lipopolysaccharides bio 99.5 6.6E-14 2.3E-18 123.7 11.7 65 280-344 6-74 (192)
76 1w55_A ISPD/ISPF bifunctional 99.5 3.2E-14 1.1E-18 137.8 10.4 196 1-266 3-202 (371)
77 3hsq_A Acyl-[acyl-carrier-prot 99.5 1.4E-13 4.9E-18 127.5 13.7 136 280-427 21-180 (259)
78 3ngw_A Molybdopterin-guanine d 99.5 5.6E-13 1.9E-17 119.1 16.6 115 2-147 1-117 (208)
79 3kwd_A Carbon dioxide concentr 99.5 1.9E-13 6.6E-18 122.8 13.6 114 284-429 40-178 (213)
80 3fs8_A QDTC; acetyltransferase 99.5 2.9E-13 9.8E-18 126.5 14.0 147 277-429 8-197 (273)
81 3bfp_A Acetyltransferase; LEFT 99.5 7.9E-13 2.7E-17 116.9 14.6 36 252-287 50-85 (194)
82 3tk8_A 2,3,4,5-tetrahydropyrid 99.5 2.9E-14 9.9E-19 134.7 5.6 22 231-253 74-95 (316)
83 3fs8_A QDTC; acetyltransferase 99.5 5.9E-13 2E-17 124.3 13.8 52 280-339 5-56 (273)
84 2oeg_A UTP-glucose-1-phosphate 99.5 6.9E-13 2.3E-17 132.1 15.0 204 1-221 75-323 (505)
85 4e79_A UDP-3-O-acylglucosamine 99.5 6.4E-13 2.2E-17 128.5 14.2 175 252-429 78-278 (357)
86 3eh0_A UDP-3-O-[3-hydroxymyris 99.4 8.5E-13 2.9E-17 127.1 14.5 52 367-419 241-293 (341)
87 3mqg_A Lipopolysaccharides bio 99.4 8.8E-13 3E-17 116.5 12.9 115 289-429 3-135 (192)
88 2pig_A Putative transferase; S 99.4 1.2E-12 4.1E-17 124.6 14.3 147 277-428 58-215 (334)
89 1hm9_A GLMU, UDP-N-acetylgluco 99.4 4.4E-13 1.5E-17 135.0 12.0 137 278-428 281-444 (468)
90 3pmo_A UDP-3-O-[3-hydroxymyris 99.4 1.3E-12 4.3E-17 127.0 14.4 175 253-429 95-295 (372)
91 3c8v_A Putative acetyltransfer 99.4 5.6E-13 1.9E-17 132.9 11.9 116 284-428 274-392 (496)
92 2qia_A UDP-N-acetylglucosamine 99.4 1.3E-12 4.4E-17 121.3 13.1 62 367-429 90-159 (262)
93 3vbi_A ANTD, galactoside O-ace 99.4 5.5E-13 1.9E-17 119.1 9.8 50 286-337 35-86 (205)
94 4fce_A Bifunctional protein GL 99.4 3.9E-13 1.3E-17 135.0 9.9 109 300-428 315-439 (459)
95 3gos_A 2,3,4,5-tetrahydropyrid 99.4 6.1E-13 2.1E-17 123.9 8.9 34 305-342 133-166 (276)
96 3vbi_A ANTD, galactoside O-ace 99.4 2E-12 6.9E-17 115.4 11.4 12 305-316 70-81 (205)
97 4ea9_A Perosamine N-acetyltran 99.4 5.5E-12 1.9E-16 113.8 13.9 38 253-290 75-112 (220)
98 2ggo_A 401AA long hypothetical 99.4 3E-12 1E-16 126.2 12.6 118 280-428 253-398 (401)
99 3ixc_A Hexapeptide transferase 99.3 4.6E-12 1.6E-16 111.7 11.5 101 306-429 34-145 (191)
100 3kwd_A Carbon dioxide concentr 99.3 5.6E-12 1.9E-16 113.2 12.2 111 275-413 43-175 (213)
101 2pig_A Putative transferase; S 99.3 7.8E-12 2.7E-16 119.0 13.7 148 276-429 70-252 (334)
102 3eg4_A 2,3,4,5-tetrahydropyrid 99.3 2.2E-12 7.5E-17 121.5 9.4 60 280-343 132-192 (304)
103 2v0h_A Bifunctional protein GL 99.3 3.1E-12 1.1E-16 128.3 11.1 150 276-428 270-436 (456)
104 3tv0_A Dynactin subunit 6; LEF 99.3 1.1E-11 3.9E-16 109.4 13.2 50 378-429 86-135 (194)
105 3t57_A UDP-N-acetylglucosamine 99.3 1.2E-11 3.9E-16 117.3 13.9 151 278-429 8-183 (305)
106 3oc9_A UDP-N-acetylglucosamine 99.3 3.4E-11 1.2E-15 116.3 17.0 201 1-219 35-275 (405)
107 2yqc_A UDP-N-acetylglucosamine 99.3 1.1E-11 3.7E-16 123.8 13.5 206 1-221 103-352 (486)
108 3r3r_A Ferripyochelin binding 99.3 1.1E-11 3.6E-16 109.0 11.8 101 306-429 16-133 (187)
109 2iu8_A LPXD, UDP-3-O-[3-hydrox 99.3 2.9E-11 9.9E-16 117.9 15.9 96 277-393 124-244 (374)
110 3eg4_A 2,3,4,5-tetrahydropyrid 99.3 4.7E-12 1.6E-16 119.2 9.7 16 378-393 203-218 (304)
111 1v3w_A Ferripyochelin binding 99.3 2.3E-11 7.8E-16 105.5 12.8 95 277-393 16-122 (173)
112 3r1w_A Carbonic anhydrase; bet 99.3 1.7E-11 5.7E-16 107.9 11.9 101 306-429 20-137 (189)
113 1xhd_A Putative acetyltransfer 99.3 2.9E-11 9.9E-16 104.8 13.0 95 277-393 18-124 (173)
114 3jqy_B NEUO, polysialic acid O 99.3 9.8E-12 3.4E-16 114.5 10.2 32 306-337 86-121 (252)
115 3tk8_A 2,3,4,5-tetrahydropyrid 99.3 1.7E-11 5.7E-16 115.8 11.0 96 281-393 149-246 (316)
116 3r8y_A 2,3,4,5-tetrahydropyrid 99.3 2.2E-11 7.5E-16 111.4 11.3 105 277-398 91-198 (240)
117 3gos_A 2,3,4,5-tetrahydropyrid 99.2 7.1E-11 2.4E-15 109.9 11.4 103 305-429 116-235 (276)
118 3jqy_B NEUO, polysialic acid O 99.2 7.3E-11 2.5E-15 108.7 11.1 33 306-338 106-143 (252)
119 1qre_A Carbonic anhydrase; bet 99.2 1.2E-10 4.1E-15 106.9 12.2 110 276-413 64-204 (247)
120 3c8v_A Putative acetyltransfer 99.2 7E-11 2.4E-15 117.8 10.5 96 276-393 278-380 (496)
121 3nz2_A Hexapeptide-repeat cont 99.2 1.3E-10 4.6E-15 102.5 10.6 52 286-340 59-115 (195)
122 3r5d_A Tetrahydrodipicolinate 99.1 3.3E-11 1.1E-15 112.0 6.2 48 367-423 237-293 (347)
123 3r5d_A Tetrahydrodipicolinate 99.1 1.7E-10 5.9E-15 107.2 10.8 66 305-393 214-288 (347)
124 3q1x_A Serine acetyltransferas 99.1 7.4E-11 2.5E-15 110.8 8.3 30 378-413 224-253 (313)
125 3hjj_A Maltose O-acetyltransfe 99.1 1.4E-10 4.9E-15 101.9 9.5 50 289-341 64-118 (190)
126 3st8_A Bifunctional protein GL 99.1 2.1E-10 7.2E-15 116.3 11.8 92 305-427 352-452 (501)
127 4ea9_A Perosamine N-acetyltran 99.1 7.7E-10 2.6E-14 99.7 13.6 93 276-393 104-199 (220)
128 1krr_A Galactoside O-acetyltra 99.1 4.5E-10 1.6E-14 99.4 10.8 51 286-339 58-113 (203)
129 3bfp_A Acetyltransferase; LEFT 99.1 8.9E-10 3E-14 97.2 12.4 43 291-337 77-123 (194)
130 2wlg_A Polysialic acid O-acety 99.1 6.9E-10 2.4E-14 99.6 11.8 27 306-332 59-90 (215)
131 3fsy_A Tetrahydrodipicolinate 99.1 4.3E-10 1.5E-14 103.8 10.3 15 378-392 234-248 (332)
132 2wlg_A Polysialic acid O-acety 99.1 4.1E-10 1.4E-14 101.1 9.6 102 306-429 37-170 (215)
133 3fsy_A Tetrahydrodipicolinate 99.0 1E-09 3.4E-14 101.4 10.0 26 367-393 240-265 (332)
134 3ftt_A Putative acetyltransfer 99.0 1.3E-09 4.3E-14 96.6 10.0 52 286-340 57-113 (199)
135 3hjj_A Maltose O-acetyltransfe 99.0 2E-09 6.9E-14 94.6 11.2 18 321-338 78-95 (190)
136 3srt_A Maltose O-acetyltransfe 99.0 4.9E-09 1.7E-13 91.9 12.7 51 286-339 59-114 (188)
137 3ftt_A Putative acetyltransfer 99.0 4.1E-09 1.4E-13 93.3 12.2 15 378-392 149-163 (199)
138 2rij_A Putative 2,3,4,5-tetrah 99.0 1.7E-09 5.9E-14 103.5 10.3 21 251-271 170-192 (387)
139 3srt_A Maltose O-acetyltransfe 99.0 1.9E-09 6.4E-14 94.5 9.6 18 321-338 76-93 (188)
140 3nz2_A Hexapeptide-repeat cont 99.0 3.3E-09 1.1E-13 93.5 11.2 8 406-413 155-162 (195)
141 4hur_A Virginiamycin A acetylt 98.9 1.3E-09 4.4E-14 98.2 7.8 32 376-413 118-149 (220)
142 1krr_A Galactoside O-acetyltra 98.9 4.3E-09 1.5E-13 93.0 10.5 12 402-413 150-161 (203)
143 2p2o_A Maltose transacetylase; 98.9 9.3E-09 3.2E-13 89.8 11.9 49 288-339 59-112 (185)
144 1ocx_A Maltose O-acetyltransfe 98.9 1.2E-08 4.1E-13 88.8 12.6 47 289-338 58-109 (182)
145 3mc4_A WW/RSP5/WWP domain:bact 98.9 1.5E-09 5E-14 100.4 7.0 27 367-393 223-250 (287)
146 3f1x_A Serine acetyltransferas 98.9 1.6E-09 5.4E-14 101.5 7.1 31 377-413 251-281 (310)
147 3q1x_A Serine acetyltransferas 98.9 3.9E-09 1.3E-13 99.1 8.9 27 367-393 230-257 (313)
148 4hur_A Virginiamycin A acetylt 98.9 1.1E-09 3.7E-14 98.6 4.6 27 367-393 120-147 (220)
149 3f1x_A Serine acetyltransferas 98.9 6.2E-09 2.1E-13 97.5 9.9 27 367-393 258-285 (310)
150 1yp2_A Glucose-1-phosphate ade 98.8 3.7E-09 1.3E-13 105.8 7.7 99 288-413 329-448 (451)
151 1ssq_A SAT, serine acetyltrans 98.8 1.3E-08 4.4E-13 93.4 9.7 34 106-142 13-48 (267)
152 1t3d_A SAT, serine acetyltrans 98.8 1.3E-08 4.6E-13 94.2 9.5 27 116-142 40-68 (289)
153 1ssq_A SAT, serine acetyltrans 98.8 7.2E-09 2.5E-13 95.1 7.6 27 367-393 196-223 (267)
154 2p2o_A Maltose transacetylase; 98.8 1.7E-08 5.8E-13 88.1 9.5 10 404-413 151-160 (185)
155 1ocx_A Maltose O-acetyltransfe 98.8 1.2E-08 4.2E-13 88.7 8.3 9 405-413 150-158 (182)
156 3mc4_A WW/RSP5/WWP domain:bact 98.8 1.5E-08 5.2E-13 93.6 9.0 36 305-344 170-207 (287)
157 1t3d_A SAT, serine acetyltrans 98.7 1.5E-08 5.1E-13 93.9 7.4 13 259-271 127-139 (289)
158 3brk_X Glucose-1-phosphate ade 98.6 5.3E-08 1.8E-12 96.4 9.0 72 317-419 320-391 (420)
159 2rij_A Putative 2,3,4,5-tetrah 98.6 9.7E-08 3.3E-12 91.5 9.2 14 97-110 57-70 (387)
160 3r3i_A UTP--glucose-1-phosphat 98.6 6.9E-06 2.4E-10 81.4 22.2 242 1-270 127-429 (528)
161 3eev_A Chloramphenicol acetylt 98.5 1E-07 3.5E-12 85.1 6.8 32 376-413 110-141 (212)
162 3eev_A Chloramphenicol acetylt 98.5 9E-08 3.1E-12 85.5 6.5 29 367-395 112-141 (212)
163 4e8l_A Virginiamycin A acetylt 98.5 1.3E-07 4.4E-12 84.6 5.7 32 376-413 117-148 (219)
164 4e8l_A Virginiamycin A acetylt 98.5 1.9E-07 6.5E-12 83.5 6.6 28 367-394 119-147 (219)
165 1mr7_A Streptogramin A acetylt 98.4 2.6E-07 9E-12 82.1 6.0 32 376-413 112-143 (209)
166 1mr7_A Streptogramin A acetylt 98.4 2.5E-07 8.5E-12 82.2 5.8 16 321-336 60-75 (209)
167 1xat_A Xenobiotic acetyltransf 98.3 3.6E-06 1.2E-10 74.7 10.1 40 368-413 100-140 (212)
168 1xat_A Xenobiotic acetyltransf 98.2 7.6E-07 2.6E-11 79.1 5.0 30 366-395 110-140 (212)
169 3gue_A UTP-glucose-1-phosphate 98.2 0.0019 6.5E-08 63.5 28.1 251 1-270 76-389 (484)
170 3ogz_A UDP-sugar pyrophosphory 97.2 0.012 3.9E-07 59.6 17.0 208 1-221 114-375 (630)
171 2i5e_A Hypothetical protein MM 96.9 0.0025 8.6E-08 56.2 8.2 104 1-136 3-111 (211)
172 3cgx_A Putative nucleotide-dip 87.7 1.5 5.1E-05 39.1 7.7 88 34-140 38-130 (242)
173 1qg8_A Protein (spore coat pol 83.4 17 0.00059 31.6 12.8 107 26-141 6-116 (255)
174 3bcv_A Putative glycosyltransf 81.6 9.7 0.00033 32.9 10.2 104 25-147 9-118 (240)
175 1xhb_A Polypeptide N-acetylgal 67.9 41 0.0014 32.6 11.6 105 26-144 34-145 (472)
176 2ffu_A Ppgalnact-2, polypeptid 64.6 39 0.0013 33.1 10.8 100 26-144 71-177 (501)
177 2z86_A Chondroitin synthase; G 58.5 69 0.0024 32.2 11.6 104 26-144 98-205 (625)
178 2d7i_A Polypeptide N-acetylgal 56.7 72 0.0025 31.9 11.2 102 26-142 117-225 (570)
179 2z86_A Chondroitin synthase; G 52.3 96 0.0033 31.1 11.4 101 26-142 380-483 (625)
180 4fix_A UDP-galactofuranosyl tr 47.4 76 0.0026 32.5 9.6 103 26-144 185-299 (657)
181 3ckj_A Putative uncharacterize 45.2 1.1E+02 0.0039 27.7 9.8 109 26-147 53-167 (329)
182 3f1y_A Mannosyl-3-phosphoglyce 41.1 86 0.0029 29.6 8.4 112 25-149 98-217 (387)
183 4hg6_A Cellulose synthase subu 29.1 1.6E+02 0.0055 30.8 8.8 42 97-141 224-266 (802)
No 1
>1yp2_A Glucose-1-phosphate adenylyltransferase small subunit; ADP-glucose synthase, ADP-glucose pyrophosphorylase, agpase B; HET: PMB; 2.11A {Solanum tuberosum} SCOP: b.81.1.4 c.68.1.6 PDB: 1yp3_A* 1yp4_A*
Probab=100.00 E-value=5.9e-59 Score=469.22 Aligned_cols=424 Identities=51% Similarity=0.922 Sum_probs=335.5
Q ss_pred eEEEEEcCCCCCCcccccccccccccccCCcchhHHHHHHhhHhcCCCeEEEEeecChhHHHHHHhccccCcccC---CC
Q 044626 2 VAAVVFGDGSESRLYPLTKRRSEGAIPLAANYRLVDAVVSNCINSNINKIYALTQFNSTSLNLHLSRAFSGILRG---KD 78 (429)
Q Consensus 2 m~avIla~G~gsRl~plt~~~pK~Llpi~g~~plI~~~i~~l~~~gi~~I~Iv~~~~~~~i~~~l~~~~~~~~~~---~~ 78 (429)
|+|||||||.|+||+|||..+||+|+|++|+||||+|+|++|.++|+++|+|+++++.+++.+|+.+.+. .+++ ..
T Consensus 21 ~~avILAaG~gtRl~plT~~~pK~llpi~g~~pli~~~l~~l~~~g~~~i~vv~~~~~~~i~~~~~~~~~-~~~~~~~~~ 99 (451)
T 1yp2_A 21 VLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYA-SNMGGYKNE 99 (451)
T ss_dssp EEEEEC------CCTTTTTTSCGGGCEETTTEETTHHHHHHHHHTTCCEEEEEESCCCHHHHHHHHHHCC---------C
T ss_pred eEEEEECCCCCCcccchhcCCcceeeEECCcceeHHHHHHHHHHCCCCEEEEEeccCHHHHHHHHhhhhh-ccccccccc
Confidence 7899999999999999999999999999997799999999999999999999999988889999875331 0111 11
Q ss_pred CcEEEEeccccccccCcccCcHHHHHHHHHHhhcCCCCeEEEEcCceeEeccHHHHHHHHHhcCCceEEEEEeccCCCCC
Q 044626 79 GFVEVIAAYQSLEDQDWFQGNADAIRRCLWVLEEYPVTEFLILPGHHLYKMDYQRLIEAHRNNKADITIVALNAIRDKHP 158 (429)
Q Consensus 79 ~~v~i~~~~~~~~~~~~~~Gt~~al~~~~~~i~~~~~~~~lvl~gD~i~~~~l~~~~~~~~~~~~~~ti~~~~~~~~~~~ 158 (429)
..+++++.++...+.+|++|++++++.+++++.....++|++++||++++.+|.+++++|+++++++++++.+.+.+++.
T Consensus 100 ~~v~i~~~~~~~~~~~~~~Gt~~al~~a~~~~~~~~~~~~lv~~~D~~~~~~l~~l~~~~~~~~~~~tl~~~~~~~~~~~ 179 (451)
T 1yp2_A 100 GFVEVLAAQQSPENPDWFQGTADAVRQYLWLFEEHTVLEYLILAGDHLYRMDYEKFIQAHRETDADITVAALPMDEKRAT 179 (451)
T ss_dssp CEEEEEESCSSTTSCCCCCSHHHHHHHTHHHHTTSCCSEEEEECSCEECCCCHHHHHHHHHHTTCSEEEEEEEECHHHHT
T ss_pred CcEEEecccccccccccccCcHHHHHHHHHHHHhcCCCeEEEecCcEEEcCCHHHHHHHHHHcCCcEEEEEEEcChhhcc
Confidence 23456554443223456789999999999988643348999999999888899999999999888998887765433467
Q ss_pred CccEEEEcCCCCEEEEEecCcccccccccCCCC----CCCCCCCCCCcceeeEEEEcHHHHHHHHHhhCCCCcccccccc
Q 044626 159 GFGLLRVNPVNQVIEFSMKSERETITSISGKSS----RKSDSVASGNFPSMGIYLINRDTMSRLLKEYLPEATDLGSEVI 234 (429)
Q Consensus 159 ~~g~v~~d~~~~v~~~~ek~~~~~~~~~~~~~~----~~~~~~~~~~~~~~Giy~~~~~~l~~~l~~~~~~~~~~~~d~l 234 (429)
.||++.+|++++|..|.|||..+....+..+.+ .+......++++++|+|+|++++|.+++++.++...++.++++
T Consensus 180 ~~g~v~~d~~~~v~~~~ekp~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~Giy~~~~~~l~~~l~~~~~~~~~~~~~~l 259 (451)
T 1yp2_A 180 AFGLMKIDEEGRIIEFAEKPQGEQLQAMKVDTTILGLDDKRAKEMPFIASMGIYVISKDVMLNLLRDKFPGANDFGSEVI 259 (451)
T ss_dssp TSEEEEECTTSBEEEEEESCCHHHHHHTCCCGGGGSCCHHHHHHCCEEEEEEEEEEEHHHHHHHHHTTCTTCCCTTTTHH
T ss_pred cCCEEEECCCCCEEEEEECCCchhhccccccccccccccccccCCcceEEeeEEEEcHHHHHHHHHhhcccccchHhhHH
Confidence 899999998899999999987432111100000 0000000246889999999999987677765444556777899
Q ss_pred hhcccCCceEEEEEecceEEecCCHHHHHHHhHhhhcccCCCcceeCCCCceecCCccCCCeEEeeeEeeCeEECCCcEE
Q 044626 235 PAAISIGMKVEAYLFDGYWEDMRSIEAFYHANMECIKRSNMRYNFYDRDCPVYTMPRCLPPTMIREAVIRDSVVGDGCII 314 (429)
Q Consensus 235 ~~l~~~g~~i~~~~~~~~~~~i~t~~~~~~an~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~~i~~~~i~~~~ig~~~~i 314 (429)
+.++++|.++++++++++|.|++|+++|.++++.++++..+...++++++.+++++.++|++.+.++.|.++.||++|+|
T Consensus 260 ~~~i~~g~~v~~~~~~~~w~digt~~~l~~a~~~l~~~~~~~~~~~~~~~~i~~~~~i~~~~~i~~~~I~~~~Ig~~~~I 339 (451)
T 1yp2_A 260 PGATSLGMRVQAYLYDGYWEDIGTIEAFYNANLGITKKPVPDFSFYDRSAPIYTQPRYLPPSKMLDADVTDSVIGEGCVI 339 (451)
T ss_dssp HHHHHTTCCEEEEECCSCCEECSSHHHHHHHHHGGGCSSSCSSCSCCSSSCCCCCCCCCCCEEEEEEEEEEEEECTTCEE
T ss_pred HHHHhcCCceEEEEeCCEEEECCCHHHHHHHHHHHhcccccchhccCCCCeeccCCccCCCeEEcceEEeCeEECCCCEE
Confidence 99888778999999999999999999999999999976645567889999999999999999998888889999999999
Q ss_pred cceEeeCcEEcCCcEECCCCEEecCeEECCcccccccccccCCccccCCcceeEeCCCCeecceEEecCcEECCCcEEec
Q 044626 315 NRCKIKGTVIGMRTRIGDGAVIEDSVIMGADFYQQGEDIQSSGKCINHKAIPVGIGEDTQIKKAVIDKNARIGKNVLIIN 394 (429)
Q Consensus 315 ~~~~v~~~~ig~~~~ig~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~~~i~~~~ig~~~~ig~~~~i~~ 394 (429)
+.+.+.+++||++|.||++|.|.+++++++++++...... +....+...+.||+++.|.+++||++|.||++++|.+
T Consensus 340 ~~~~i~~~~Ig~~~~Ig~~~~I~~~~~~~~~~~~~~~~~~---~~~~~g~~~~~Ig~~~~i~~~~Ig~~~~IG~~~~i~~ 416 (451)
T 1yp2_A 340 KNCKIHHSVVGLRSCISEGAIIEDSLLMGADYYETDADRK---LLAAKGSVPIGIGKNCHIKRAIIDKNARIGDNVKIIN 416 (451)
T ss_dssp EEEEEESCEECTTCEECTTCEEESCEECCCSSCCCHHHHH---HHHTTTCCCSEECTTCEEESEEECTTCEECTTCEECC
T ss_pred cceEEeccEECCCCEECCCCEEcCceEECCCCcccccccc---cccccCceeEEECCCCEEeccEeCCCcEECCCCEEeC
Confidence 8877889999999999999999999999874433211111 1112222337899999999999999999999999999
Q ss_pred CCCCCCCeeecCCeEEccCEEEEcCCCEeCCCccC
Q 044626 395 KDGVQEGDREANGYIISEGIVVIIHGAEIADGSII 429 (429)
Q Consensus 395 ~~~~~~~~~~~~~~~i~~~~~~i~~~~~i~~~~vv 429 (429)
++++.++.++|++++|++++|+||++++|++||+|
T Consensus 417 ~~~~~~~~~ig~~~~ig~~~v~Ig~~a~i~agsvv 451 (451)
T 1yp2_A 417 KDNVQEAARETDGYFIKSGIVTVIKDALIPSGIII 451 (451)
T ss_dssp SSCCSCEEEGGGTEEEETTEEEECTTCEECTTCBC
T ss_pred CcccccCceeCCCEEEcCCEEEECCCcEECCCccC
Confidence 99998888999999999998899999999999987
No 2
>3brk_X Glucose-1-phosphate adenylyltransferase; ADP-glucose pyrophosphorylase, allostery, kinetics, structure-function relationships; 2.10A {Agrobacterium tumefaciens}
Probab=100.00 E-value=5.3e-50 Score=400.06 Aligned_cols=355 Identities=29% Similarity=0.521 Sum_probs=285.0
Q ss_pred CeEEEEEcCCCCCCcccccccccccccccCCcchhHHHHHHhhHhcCCCeEEEEeecChhHHHHHHhccccCcccC---C
Q 044626 1 SVAAVVFGDGSESRLYPLTKRRSEGAIPLAANYRLVDAVVSNCINSNINKIYALTQFNSTSLNLHLSRAFSGILRG---K 77 (429)
Q Consensus 1 ~m~avIla~G~gsRl~plt~~~pK~Llpi~g~~plI~~~i~~l~~~gi~~I~Iv~~~~~~~i~~~l~~~~~~~~~~---~ 77 (429)
+|+|||||||.|+||+|||..+||+|+|++|+||||+|+|++|.++|+++|+|+++++.+++.+++.+.+ +.+ .
T Consensus 12 ~~~avILAaG~gtRl~plT~~~pK~llpi~gk~pli~~~l~~l~~~gi~~i~vv~~~~~~~i~~~~~~~~---~~~~~~~ 88 (420)
T 3brk_X 12 DAMAYVLAGGRGSRLKELTDRRAKPAVYFGGKARIIDFALSNALNSGIRRIGVATQYKAHSLIRHLQRGW---DFFRPER 88 (420)
T ss_dssp GEEEEEEECCCCGGGGGGGSSSCGGGSEETTTEETHHHHHHHHHHTTCCEEEEEECTTCHHHHHHHHHHS---CCCCGGG
T ss_pred ceEEEEEcCCCCCccchhhcCCcccccccCCCCcHHHHHHHHHHhCCCCeEEEEeCCChHHHHHHHhhhh---ccccccc
Confidence 3789999999999999999999999999999867999999999999999999999998888999997642 221 0
Q ss_pred CCcEEEEeccccccccCcccCcHHHHHHHHHHhhcCCCCeEEEEcCceeEeccHHHHHHHHHhcCCceEEEEEeccCCCC
Q 044626 78 DGFVEVIAAYQSLEDQDWFQGNADAIRRCLWVLEEYPVTEFLILPGHHLYKMDYQRLIEAHRNNKADITIVALNAIRDKH 157 (429)
Q Consensus 78 ~~~v~i~~~~~~~~~~~~~~Gt~~al~~~~~~i~~~~~~~~lvl~gD~i~~~~l~~~~~~~~~~~~~~ti~~~~~~~~~~ 157 (429)
...+.+++..+...+..|..|++++++++++++.....++|++++||++++.++.+++++|+++++++++++.+.+.+++
T Consensus 89 ~~~v~i~~~~~~~~~~~~~~Gt~~al~~a~~~l~~~~~~~~lv~~~D~~~~~~l~~l~~~~~~~~~~~tl~~~~~~~~~~ 168 (420)
T 3brk_X 89 NESFDILPASQRVSETQWYEGTADAVYQNIDIIEPYAPEYMVILAGDHIYKMDYEYMLQQHVDSGADVTIGCLEVPRMEA 168 (420)
T ss_dssp TCEEEEECCC-------CCCCHHHHHHTTHHHHHHHCCSEEEEEESSCEECBCTHHHHHHHHHTTCSEEEEEEEEETTGG
T ss_pred cCCEEEeCccccccCCccccCCHHHHHHHHHHHHhcCCCEEEEecccEEEchHHHHHHHHHHHcCCeEEEEEeecCcccc
Confidence 12244554333111233568999999999988863223789999999998889999999999988889888877654566
Q ss_pred CCccEEEEcCCCCEEEEEecCcccccccccCCCCCCCCCCCCCCcceeeEEEEcHHHHHHHHHhhCC---CCcccccccc
Q 044626 158 PGFGLLRVNPVNQVIEFSMKSERETITSISGKSSRKSDSVASGNFPSMGIYLINRDTMSRLLKEYLP---EATDLGSEVI 234 (429)
Q Consensus 158 ~~~g~v~~d~~~~v~~~~ek~~~~~~~~~~~~~~~~~~~~~~~~~~~~Giy~~~~~~l~~~l~~~~~---~~~~~~~d~l 234 (429)
..||++.+|+++++..|.|||..+... .....+++.++|+|+|++++|.+++++... ...+|..+++
T Consensus 169 ~~~g~v~~d~~g~v~~~~ekp~~~~~~----------~~~~~~~~~~~Giy~~~~~~l~~~l~~~~~~~~~~~~~~~d~l 238 (420)
T 3brk_X 169 TGFGVMHVNEKDEIIDFIEKPADPPGI----------PGNEGFALASMGIYVFHTKFLMEAVRRDAADPTSSRDFGKDII 238 (420)
T ss_dssp GGSEEEEECTTSBEEEEEESCSSCCCB----------TTBTTEEEEEEEEEEEEHHHHHHHHTSSCCC----------CT
T ss_pred CcccEEEECCCCcEEEeEeCCCccccc----------cccccceEEeeeeEEEeHHHHHHHHHHhcccCCccccchHHHH
Confidence 789999998889999999997643100 000135789999999999998667764322 1235667999
Q ss_pred hhcccCCceEEEEEe-----------cceEEecCCHHHHHHHhHhhhcccCCCcceeCCCCceecCCccCCCeEE-e---
Q 044626 235 PAAISIGMKVEAYLF-----------DGYWEDMRSIEAFYHANMECIKRSNMRYNFYDRDCPVYTMPRCLPPTMI-R--- 299 (429)
Q Consensus 235 ~~l~~~g~~i~~~~~-----------~~~~~~i~t~~~~~~an~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~~i-~--- 299 (429)
+.+++++ +++++.+ +++|.|++|+++|+++++.+++.. +......++..+...+.++|++.+ .
T Consensus 239 ~~li~~g-~v~~~~~~~~~~~~~~~~~~~~~dI~t~~d~~~a~~~ll~~~-~~~~~~~~~~~i~~~~~i~~~~~i~~~~~ 316 (420)
T 3brk_X 239 PYIVEHG-KAVAHRFADSCVRSDFEHEPYWRDVGTIDAYWQANIDLTDVV-PDLDIYDKSWPIWTYAEITPPAKFVHDDE 316 (420)
T ss_dssp THHHHHS-CEEEEEHHHHBCCCTTCSSCCEECCCSHHHHHHHHHHTTSSS-CSSCTTCCSSCCCCCCCCCCCCEEECBCS
T ss_pred HHHhhhC-cEEEEEeccccccccccCCCEEEECCCHHHHHHHHHHHhCCC-chhhcCCCCCceeeccccCCCcEEecccc
Confidence 9999886 8999999 889999999999999999999765 444455667778888899999999 4
Q ss_pred --eeEeeCeEECCCcEEcc-eEeeCcEEcCCcEECCCCEEecCeEECCcccccccccccCCccccCCcceeEeCCCCeec
Q 044626 300 --EAVIRDSVVGDGCIINR-CKIKGTVIGMRTRIGDGAVIEDSVIMGADFYQQGEDIQSSGKCINHKAIPVGIGEDTQIK 376 (429)
Q Consensus 300 --~~~i~~~~ig~~~~i~~-~~v~~~~ig~~~~ig~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~~~i~ 376 (429)
++.+.++.||++|+| . +.|.+|+||++|.||++|.|.+++++++ +.||++|.|.
T Consensus 317 ~~~~~i~~~~ig~~~~I-~~~~i~~~~ig~~~~I~~~~~i~~~~i~~~----------------------~~i~~~~~i~ 373 (420)
T 3brk_X 317 DRRGSAVSSVVSGDCII-SGAALNRSLLFTGVRANSYSRLENAVVLPS----------------------VKIGRHAQLS 373 (420)
T ss_dssp SCBCEEESCEECSSCEE-ESCEEESCEECTTCEECTTCEEEEEEECTT----------------------CEECTTCEEE
T ss_pred cCCcEecCCEECCCCEE-cCCEEeCcEEcCCCEECCCCEEcceEEcCC----------------------CEECCCCEEe
Confidence 577889999999999 6 8899999999999999999998887776 8999999999
Q ss_pred ceEEecCcEECCCcEEe
Q 044626 377 KAVIDKNARIGKNVLII 393 (429)
Q Consensus 377 ~~~ig~~~~ig~~~~i~ 393 (429)
+++||++|.||++++|.
T Consensus 374 ~~~ig~~~~i~~~~~i~ 390 (420)
T 3brk_X 374 NVVIDHGVVIPEGLIVG 390 (420)
T ss_dssp EEEECTTCEECTTCEES
T ss_pred ceEECCCCEECCCCEEe
Confidence 99999999999999997
No 3
>3st8_A Bifunctional protein GLMU; acetyltransferase, pyrophosphorylase, rossmann fold, LEFT-handed-beta-helix, cell shape; HET: COA GP1 UD1; 1.98A {Mycobacterium tuberculosis} PDB: 3spt_A* 3foq_A 3dk5_A 3d8v_A 3d98_A* 3dj4_A 2qkx_A*
Probab=100.00 E-value=2.7e-48 Score=395.89 Aligned_cols=389 Identities=16% Similarity=0.182 Sum_probs=274.4
Q ss_pred eEEEEEcCCCCCCcccccccccccccccCCcchhHHHHHHhhHhcCCCeEEEEeecChhHHHHHHhccccCcccCCCCcE
Q 044626 2 VAAVVFGDGSESRLYPLTKRRSEGAIPLAANYRLVDAVVSNCINSNINKIYALTQFNSTSLNLHLSRAFSGILRGKDGFV 81 (429)
Q Consensus 2 m~avIla~G~gsRl~plt~~~pK~Llpi~g~~plI~~~i~~l~~~gi~~I~Iv~~~~~~~i~~~l~~~~~~~~~~~~~~v 81 (429)
+.+||||||+||||+|+| ||||+||+|+ |||+|+|++|.++|+++|+|+++|+.+++++|+.+....++.+
T Consensus 13 ~~vvILAaG~GtRm~~~~---pK~l~pv~gk-p~i~~~l~~~~~~g~~~i~vv~~~~~~~i~~~~~~~~~~~~~~----- 83 (501)
T 3st8_A 13 TAVLVLAAGPGTRMRSDT---PKVLHTLAGR-SMLSHVLHAIAKLAPQRLIVVLGHDHQRIAPLVGELADTLGRT----- 83 (501)
T ss_dssp EEEEEEECSCCGGGCCSS---CGGGCEETTE-EHHHHHHHHHHHHCCSEEEEEECTTHHHHHHHHHHHHHHHTSC-----
T ss_pred ceEEEECCcCcccCCCCC---CHHHeEECCh-hHHHHHHHHHHhCCCCEEEEEeCCCHHHHHHHHHHHHHhcCCc-----
Confidence 567999999999999976 9999999999 9999999999999999999999999999999997633223332
Q ss_pred EEEeccccccccCcccCcHHHHHHHHHHhhcCCCCeEEEEcCce-eE-eccHHHHHHHHHhcCCceEEEEEeccCCCCCC
Q 044626 82 EVIAAYQSLEDQDWFQGNADAIRRCLWVLEEYPVTEFLILPGHH-LY-KMDYQRLIEAHRNNKADITIVALNAIRDKHPG 159 (429)
Q Consensus 82 ~i~~~~~~~~~~~~~~Gt~~al~~~~~~i~~~~~~~~lvl~gD~-i~-~~~l~~~~~~~~~~~~~~ti~~~~~~~~~~~~ 159 (429)
+.+..|. +++|||+|++++++++.+...+.+++++||. +. ...+..++++|+..+++++++..+.+ +|..
T Consensus 84 -i~~~~q~-----~~lGTa~Av~~a~~~l~~~~~~~~lvl~gd~~l~~~~~~~~l~~~h~~~~~~~ti~~~~~~--dp~~ 155 (501)
T 3st8_A 84 -IDVALQD-----RPLGTGHAVLCGLSALPDDYAGNVVVTSGDTPLLDADTLADLIATHRAVSAAVTVLTTTLD--DPFG 155 (501)
T ss_dssp -CEEEECS-----SCCCHHHHHHHHHTTSCTTCCSEEEEEETTCTTCCHHHHHHHHHHHHHTTCSEEEEEEECS--CCTT
T ss_pred -EEEEEcC-----CCCCcHHHHHHHHHHhccccccceeeecCcceeecHHHHHHHHHHHhhccccceEeeeccC--Cchh
Confidence 3333443 3689999999999999754457899999998 44 55679999999999999999877764 7899
Q ss_pred ccEEEEcCCCCEEEEEecCcccccccccCCCCCCCCCCCCCCcceeeEEEEcHHHHHHHHHhhCC---CCcccccccchh
Q 044626 160 FGLLRVNPVNQVIEFSMKSERETITSISGKSSRKSDSVASGNFPSMGIYLINRDTMSRLLKEYLP---EATDLGSEVIPA 236 (429)
Q Consensus 160 ~g~v~~d~~~~v~~~~ek~~~~~~~~~~~~~~~~~~~~~~~~~~~~Giy~~~~~~l~~~l~~~~~---~~~~~~~d~l~~ 236 (429)
||.+..|++|++..+.||+..+... ...+++++|+|+|+++.|+++++.... ..+.+..+++..
T Consensus 156 yG~i~~~~~g~v~~ivEk~~~~~~~-------------~~i~~in~Giy~f~~~~l~~~l~~l~~~n~~~e~yltd~i~~ 222 (501)
T 3st8_A 156 YGRILRTQDHEVMAIVEQTDATPSQ-------------REIREVNAGVYAFDIAALRSALSRLSSNNAQQELYLTDVIAI 222 (501)
T ss_dssp SCEEEECTTCCEEEEECGGGCCHHH-------------HHCCEEEEEEEEEEHHHHHHHHTTCCCCSTTCSCCTTHHHHH
T ss_pred ccccccccceeEEeeccccCCChhh-------------ccceeeeceeeeecchhHHHhhhhhcccccccccchhhHHHH
Confidence 9999999999999999997643210 135789999999999999877775422 234556788888
Q ss_pred cccCCceEEEEEecceEEe--cCCHHHHHHHhHhhhccc------------CCCcceeCCCCceecCCccCCCeEEeeeE
Q 044626 237 AISIGMKVEAYLFDGYWED--MRSIEAFYHANMECIKRS------------NMRYNFYDRDCPVYTMPRCLPPTMIREAV 302 (429)
Q Consensus 237 l~~~g~~i~~~~~~~~~~~--i~t~~~~~~an~~~l~~~------------~~~~~~~~~~~~~~~~~~i~~~~~i~~~~ 302 (429)
+...|..+..+..+..|.. +++...+.++...+..+. .+...++..+..+++++.|++++.+.
T Consensus 223 ~~~~g~~v~~~~~~~~~~~~g~n~~~~l~~~~~~~~~r~~~~~~~~gv~~~dp~~~~i~~dv~IG~dv~I~~~v~i~--- 299 (501)
T 3st8_A 223 LRSDGQTVHASHVDDSALVAGVNNRVQLAELASELNRRVVAAHQLAGVTVVDPATTWIDVDVTIGRDTVIHPGTQLL--- 299 (501)
T ss_dssp HHHTTCCEEEEECSSGGGGCCCSSHHHHHHHHHHHHHHHHHHHHHTTCEESCGGGEEECTTCEECTTCEECSSEEEE---
T ss_pred HHhcCceEEEEeccchhhhcccccHHHHHHHHHHhhhhhhhhhcccCceeeeeccccccCceEECCcceecceeeec---
Confidence 8888888888887765544 445444444433222111 13344566666677777666666653
Q ss_pred eeCeEECCCcEEcc-eEe----------------eCcEEcCCcEECCCCEEecCeEECC-cccccccccccCCccccCCc
Q 044626 303 IRDSVVGDGCIINR-CKI----------------KGTVIGMRTRIGDGAVIEDSVIMGA-DFYQQGEDIQSSGKCINHKA 364 (429)
Q Consensus 303 i~~~~ig~~~~i~~-~~v----------------~~~~ig~~~~ig~~~~i~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 364 (429)
+++.++++|++++ +.+ ..+.+++++.+|+++.+.++++++. ..+++..+.+++. .+
T Consensus 300 -g~~~Ig~~~~I~~~~~i~~~~i~~~~~i~~~~i~~~~ig~~~~ig~~~~i~~~~~i~~~v~IG~~v~ik~s~-----Ig 373 (501)
T 3st8_A 300 -GRTQIGGRCVVGPDTTLTDVAVGDGASVVRTHGSSSSIGDGAAVGPFTYLRPGTALGADGKLGAFVEVKNST-----IG 373 (501)
T ss_dssp -TTCEECTTCEECSSCEEEEEEECTTCEECSEEEEEEEECTTCEECSSEEECTTCEECTTCEEEETEEEESCE-----EC
T ss_pred -CccccccceEEeeceeecCceEecCCEEEeecccccccccccccCCceeecCCcEEccccccCCeEEEccce-----ec
Confidence 1222222222221 111 1122333333333333333333222 2222333333322 11
Q ss_pred ceeEeCCCCeecceEEecCcEECCCcEEecCCCCCCC-eeecCCeEEccCE-----EEEcCCCEeCCCccC
Q 044626 365 IPVGIGEDTQIKKAVIDKNARIGKNVLIINKDGVQEG-DREANGYIISEGI-----VVIIHGAEIADGSII 429 (429)
Q Consensus 365 ~~~~ig~~~~i~~~~ig~~~~ig~~~~i~~~~~~~~~-~~~~~~~~i~~~~-----~~i~~~~~i~~~~vv 429 (429)
..+.|++.+.+.+++||+||.||++|+++|+++..++ +++|++++||+++ +.||+++.|++||+|
T Consensus 374 ~gskI~~~~~i~d~~Ig~~v~IG~g~i~~n~dg~~~~~t~IGd~~~iG~~~~l~~~v~Ig~~~~i~ags~v 444 (501)
T 3st8_A 374 TGTKVPHLTYVGDADIGEYSNIGASSVFVNYDGTSKRRTTVGSHVRTGSDTMFVAPVTIGDGAYTGAGTVV 444 (501)
T ss_dssp TTCEEEESCEEESEEECSSCEECTTCEEECBCSSSBCCEEECTTCEECTTCEEESSEEECTTCEECTTCEE
T ss_pred CCcEEeccceecCceEcCCCEECCCEEEEcccCCcccCCEECCCcEECCCCEEcCCcEECCCCEECCCCEE
Confidence 1167788888889999999999999999999998877 6679888888764 789999999999975
No 4
>2ggo_A 401AA long hypothetical glucose-1-phosphate thymidylyltransferase; beta barrel; 1.80A {Sulfolobus tokodaii} PDB: 2ggq_A*
Probab=100.00 E-value=5.8e-46 Score=368.92 Aligned_cols=355 Identities=19% Similarity=0.281 Sum_probs=268.5
Q ss_pred eEEEEEcCCCCCCcccccccccccccccCCcchhHHHHHHhhHhcCCCeEEEEeecChhHHHHHHhccccCcccCCCCcE
Q 044626 2 VAAVVFGDGSESRLYPLTKRRSEGAIPLAANYRLVDAVVSNCINSNINKIYALTQFNSTSLNLHLSRAFSGILRGKDGFV 81 (429)
Q Consensus 2 m~avIla~G~gsRl~plt~~~pK~Llpi~g~~plI~~~i~~l~~~gi~~I~Iv~~~~~~~i~~~l~~~~~~~~~~~~~~v 81 (429)
|+|||||||.|+||+|+|...||+|+|++|+ |||+|+++.|.++++++|+|+++++ +.+++.+... .+
T Consensus 1 m~aiIlA~G~g~R~~plt~~~~K~ll~i~g~-pli~~~l~~l~~~~~~~i~vv~~~~---i~~~~~~~~~--------~i 68 (401)
T 2ggo_A 1 MKAFILAAGSGERLEPITHTRPKAFVPILSK-PLIEYQIEYLRKCGIRDITVIVSSK---NKEYFEKKLK--------EI 68 (401)
T ss_dssp CEEEEECCCCCGGGTTGGGTSCGGGCEETTE-EHHHHHHHHHHHTTCCEEEEEECGG---GHHHHHHHCT--------TC
T ss_pred CeEEEEcCcCccccCcccCCCCcceeeECCE-eHHHHHHHHHHHCCCCEEEEEeCHH---HHHHhhccCC--------cE
Confidence 8999999999999999999999999999999 9999999999999999999999876 6677765321 12
Q ss_pred EEEeccccccccCcccCcHHHHHHHHHHhhcCCCCeEEEEcCceeEe--ccHHHHHHHHHhcCCceEEEEEeccCCCCCC
Q 044626 82 EVIAAYQSLEDQDWFQGNADAIRRCLWVLEEYPVTEFLILPGHHLYK--MDYQRLIEAHRNNKADITIVALNAIRDKHPG 159 (429)
Q Consensus 82 ~i~~~~~~~~~~~~~~Gt~~al~~~~~~i~~~~~~~~lvl~gD~i~~--~~l~~~~~~~~~~~~~~ti~~~~~~~~~~~~ 159 (429)
.++. +. + |+.|++++++.+++ .++|++++||+.+. .+++.+++ .+++++++.+.. ++..
T Consensus 69 ~~~~--~~--~--~~~g~~~~l~~~~~------~~~~lv~~~D~~~~~~~~~~~l~~-----~~~~~i~~~~~~--~~~~ 129 (401)
T 2ggo_A 69 SIVT--QK--D--DIKGTGAAILSAKF------NDEALIIYGDLFFSNEKEICNIIT-----LKENAIIGVKVS--NPKD 129 (401)
T ss_dssp EEEE--CC--T--TCCBSTTTGGGCCC------SSEEEEEETTEEESCSHHHHHHTT-----CSSEEEEEEECS--CCSS
T ss_pred EEEe--CC--C--CCCChHHHHHHhcc------CCCEEEEeCccccccHHHHHHHHH-----hcCCEEEEEEcC--CCcc
Confidence 2332 21 1 24788888887643 28999999999775 56676665 356677666543 5667
Q ss_pred ccEEEEcCCCCEEEEEecCcccccccccCCCCCCCCCCCCCCcceeeEEEEcHHHHHHHHHhhCCC--Ccccccccchhc
Q 044626 160 FGLLRVNPVNQVIEFSMKSERETITSISGKSSRKSDSVASGNFPSMGIYLINRDTMSRLLKEYLPE--ATDLGSEVIPAA 237 (429)
Q Consensus 160 ~g~v~~d~~~~v~~~~ek~~~~~~~~~~~~~~~~~~~~~~~~~~~~Giy~~~~~~l~~~l~~~~~~--~~~~~~d~l~~l 237 (429)
|+.+..+++|++..+.+||..+ .+++.++|+|+|+++.|+ .+++..+. ......++++.+
T Consensus 130 ~~~v~~~~~g~v~~~~ek~~~~-----------------~~~~~~~Giy~~~~~~~~-~l~~~~~~~~~~~~~~~~~~~~ 191 (401)
T 2ggo_A 130 YGVLVLDNQNNLSKIIEKPEIP-----------------PSNLINAGIYKLNSDIFT-YLDKISISERGELELTDAINLM 191 (401)
T ss_dssp SCEEEECTTSSEEEEECSCSSC-----------------SCSEEEEEEEEEETHHHH-HHHHSCCCSSSCBCHHHHHHHH
T ss_pred eeEEEECCCCeEEEEEECCCCC-----------------CCcEEEEEEEEEcHHHHH-HhhhcCcCCCCceEHHHHHHHH
Confidence 8888888889999999987543 467899999999999986 56554221 111235777777
Q ss_pred ccCCceEEEEEecceEEecCCHHHHHHHhHhhhcccC-C-CcceeCCCCceecCCccCCCeEE-eeeEe-eCeEECCCcE
Q 044626 238 ISIGMKVEAYLFDGYWEDMRSIEAFYHANMECIKRSN-M-RYNFYDRDCPVYTMPRCLPPTMI-REAVI-RDSVVGDGCI 313 (429)
Q Consensus 238 ~~~g~~i~~~~~~~~~~~i~t~~~~~~an~~~l~~~~-~-~~~~~~~~~~~~~~~~i~~~~~i-~~~~i-~~~~ig~~~~ 313 (429)
+.+.++..++.+++|.+++||+||.++++.++++.. + ....+++.+.+.+.+.+++++.| +++.+ .++.||++|.
T Consensus 192 -~~g~~v~~~~~~~~~~dI~t~edl~~a~~~l~~~~~~~~~~~~i~~~~~i~~~~~ig~~~~I~~~~~i~~~~~Ig~~~~ 270 (401)
T 2ggo_A 192 -AKDHRVKVIEYEGYWMDIGKPWNIIDVNKWALDNLVFSQNLGNVEDNVKIKGKVIIEEDAEIKSGTYIEGPVYIGKGSE 270 (401)
T ss_dssp -HHHSCEEEEECCSCEEECCSHHHHHHHHHHHHHHTCCCEECSEECSSCEEESCEEECTTCEECTTCEEESSEEECTTCE
T ss_pred -HCCCcEEEEEecceEEcCCCHHHHHHHHHHHHHhcccccccceeCCCCEEcCCeEEcCCCEECCCCEEeCCeEECCCCE
Confidence 555789999999999999999999999999887642 1 12345666666666666666666 45554 5788888888
Q ss_pred Ecc-eEee-CcEEcCCcEECCCCEEecCeEECCcccccccccccCCccccCCcceeEeCCCCeecceEEecCcEECCCcE
Q 044626 314 INR-CKIK-GTVIGMRTRIGDGAVIEDSVIMGADFYQQGEDIQSSGKCINHKAIPVGIGEDTQIKKAVIDKNARIGKNVL 391 (429)
Q Consensus 314 i~~-~~v~-~~~ig~~~~ig~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~~~i~~~~ig~~~~ig~~~~ 391 (429)
|++ +.+. +++||++|.||++|.|.++++.++ +.|++++.+.+++||++|.||+++.
T Consensus 271 I~~~~~i~~~~~Ig~~~~ig~~~~i~~~~i~~~----------------------~~i~~~~~i~~~~Ig~~~~Ig~~~~ 328 (401)
T 2ggo_A 271 IGPNSYLRPYTILVEKNKIGASVEVKESVIMEG----------------------SKIPHLSYVGDSVIAEDVNFGAGTL 328 (401)
T ss_dssp ECSSCEECTTEEECSSCEEEETCEEESEEECTT----------------------CEEEESCEEESCEECTTCEECTTCE
T ss_pred ECCCCEEcCCcEECCCCEECCCCEEecCEEcCC----------------------cEECCCceEcceEECCCcEECCCcE
Confidence 888 7775 799999999999999977666665 7899999999999999999999999
Q ss_pred Eec------------------------CCCCCCCeeecCCeEEccCEEEEcCCCEeCCCccC
Q 044626 392 IIN------------------------KDGVQEGDREANGYIISEGIVVIIHGAEIADGSII 429 (429)
Q Consensus 392 i~~------------------------~~~~~~~~~~~~~~~i~~~~~~i~~~~~i~~~~vv 429 (429)
|.+ +..++++..+|.+++|.+| +.||++++|++||+|
T Consensus 329 i~~~~~~~~~~~~~i~~~~~~~~~~~~~v~Ig~~~~Ig~~~~I~~g-v~Ig~~~vi~~gsvv 389 (401)
T 2ggo_A 329 IANLRFDEKEVKVNVKGKRISSGRRKLGAFIGGHVRTGINVTILPG-VKIGAYARIYPGAVV 389 (401)
T ss_dssp ECCSCTTCSCCEEEETTEEEECSCSSCCCEECTTCEECTTCEECTT-CEECTTCEECTTCEE
T ss_pred EcCcccCCCceeEEECCceEEecccccCcEECCCeEECCCcEEcCC-cEECCCcEECCCCeE
Confidence 973 2333444444555555555 677777777777764
No 5
>1hm9_A GLMU, UDP-N-acetylglucosamine-1-phosphate uridyltransfe; acetyltransferase, bifunctional, drug design; HET: ACO UD1; 1.75A {Streptococcus pneumoniae} SCOP: b.81.1.4 c.68.1.5 PDB: 1hm8_A* 1hm0_A* 4ac3_A* 4aaw_A* 1g97_A* 1g95_A*
Probab=100.00 E-value=4.5e-45 Score=369.73 Aligned_cols=374 Identities=17% Similarity=0.225 Sum_probs=259.1
Q ss_pred EEEEEcCCCCCCcccccccccccccccCCcchhHHHHHHhhHhcCCCeEEEEeecChhHHHHHHhccccCcccCCCCcEE
Q 044626 3 AAVVFGDGSESRLYPLTKRRSEGAIPLAANYRLVDAVVSNCINSNINKIYALTQFNSTSLNLHLSRAFSGILRGKDGFVE 82 (429)
Q Consensus 3 ~avIla~G~gsRl~plt~~~pK~Llpi~g~~plI~~~i~~l~~~gi~~I~Iv~~~~~~~i~~~l~~~~~~~~~~~~~~v~ 82 (429)
+|||||||.|+||++ .+||+|+|++|+ |||+|+++.|.++++++|+|+++++.+++.+++.+. +.
T Consensus 13 ~~vIlAaG~g~R~~~---~~pK~l~~i~gk-pli~~~l~~l~~~g~~~iivv~~~~~~~i~~~~~~~-----------i~ 77 (468)
T 1hm9_A 13 FAIILAAGKGTRMKS---DLPKVLHKVAGI-SMLEHVFRSVGAIQPEKTVTVVGHKAELVEEVLAGQ-----------TE 77 (468)
T ss_dssp EEEEECCCCCGGGCC---SSCGGGSEETTE-EHHHHHHHHHHTTCCSEEEEEECTTHHHHHHSSSSS-----------SE
T ss_pred cEEEEcCCCCccCCC---CCCcEeeEECCc-cHHHHHHHHHHhcCCCCEEEEECCCHHHHHHHhCCC-----------cE
Confidence 799999999999984 689999999999 999999999999999999999999888787776541 12
Q ss_pred EEeccccccccCcccCcHHHHHHHHHHhhcCCCCeEEEEcCce--eEeccHHHHHHHHHhcCCceEEEEEeccCCCCCCc
Q 044626 83 VIAAYQSLEDQDWFQGNADAIRRCLWVLEEYPVTEFLILPGHH--LYKMDYQRLIEAHRNNKADITIVALNAIRDKHPGF 160 (429)
Q Consensus 83 i~~~~~~~~~~~~~~Gt~~al~~~~~~i~~~~~~~~lvl~gD~--i~~~~l~~~~~~~~~~~~~~ti~~~~~~~~~~~~~ 160 (429)
++. +. ++.|++++++.++++++.. .+.||+++||+ +...+++.++++|++.+++++++..+. +++..|
T Consensus 78 ~v~--~~-----~~~G~~~sl~~a~~~~~~~-~~~vlv~~~D~P~i~~~~i~~l~~~~~~~~~~~~i~~~~~--~~~~~~ 147 (468)
T 1hm9_A 78 FVT--QS-----EQLGTGHAVMMTEPILEGL-SGHTLVIAGDTPLITGESLKNLIDFHINHKNVATILTAET--DNPFGY 147 (468)
T ss_dssp EEE--CS-----SCCCHHHHHHTTHHHHTTC-CSEEEEEETTCTTCCHHHHHHHHHHHHHTTCSEEEEEEEC--SCCTTS
T ss_pred EEe--CC-----ccCChHHHHHHHHHHhccC-CCeEEEEeCCccccCHHHHHHHHHHHHhcCCcEEEEEecc--CCCCce
Confidence 322 21 2479999999999988621 38999999999 557789999999998888888876654 356789
Q ss_pred cEEEEcCCCCEEEEEecCcccccccccCCCCCCCCCCCCCCcceeeEEEEcHHHHHHHHHhhCCC---Ccccccccchhc
Q 044626 161 GLLRVNPVNQVIEFSMKSERETITSISGKSSRKSDSVASGNFPSMGIYLINRDTMSRLLKEYLPE---ATDLGSEVIPAA 237 (429)
Q Consensus 161 g~v~~d~~~~v~~~~ek~~~~~~~~~~~~~~~~~~~~~~~~~~~~Giy~~~~~~l~~~l~~~~~~---~~~~~~d~l~~l 237 (429)
+.+..|+++++..+.||+..... ...+++.++|+|+|+++.|.+.+++.... ...+..|+++.+
T Consensus 148 g~v~~d~~g~v~~~~ek~~~~~~-------------~~~~~~~~~Giy~f~~~~l~~~l~~~~~~~~~~~~~~~d~~~~l 214 (468)
T 1hm9_A 148 GRIVRNDNAEVLRIVEQKDATDF-------------EKQIKEINTGTYVFDNERLFEALKNINTNNAQGEYYITDVIGIF 214 (468)
T ss_dssp CEEEECTTCCEEEEECTTTCCTT-------------GGGCCEEEEEEEEEEHHHHHHHHTTCCSCSTTCSCCTTHHHHHH
T ss_pred eEEEECCCCCEEEEEECCCCChH-------------HhcCeEEEEEEEEEEHHHHHHHHHhhccccCCCeEEHHHHHHHH
Confidence 99989888999999998642100 01357899999999999776676653222 234457899999
Q ss_pred ccCCceEEEEEecceEEe--cCCHHHHHHHhHhhhccc------------CCCcceeCCCCceecCCccCCCeEEeeeEe
Q 044626 238 ISIGMKVEAYLFDGYWED--MRSIEAFYHANMECIKRS------------NMRYNFYDRDCPVYTMPRCLPPTMIREAVI 303 (429)
Q Consensus 238 ~~~g~~i~~~~~~~~~~~--i~t~~~~~~an~~~l~~~------------~~~~~~~~~~~~~~~~~~i~~~~~i~~~~i 303 (429)
+++|.+++++.++++|.+ ++|+++|..++..+..+. .+..+++++++.+++++.|+|++.+.
T Consensus 215 ~~~g~~v~~~~~~g~~~~i~i~t~~dl~~a~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~i~~~~~i~~~~~i~---- 290 (468)
T 1hm9_A 215 RETGEKVGAYTLKDFDESLGVNDRVALATAESVMRRRINHKHMVNGVSFVNPEATYIDIDVEIAPEVQIEANVILK---- 290 (468)
T ss_dssp HHHTCCEEEEECSSGGGGCCCCSHHHHHHHHHHHHHHHHHHHHHTTCEESCGGGCEECTTCEECTTCEECSSCEEE----
T ss_pred HHCCCEEEEEEcCChHHhhCCCCHHHHHHHHHHHHHHHHHHHHhcCCEEECCCeeEECCCcEECCCCEECCCcEEC----
Confidence 988889999999999977 559999999987654331 12234455555555555555555543
Q ss_pred eCeEECCCcEEcc-eEeeCc----------------EEcCCcEECCCCEEecCeEECC-cccccccccccCCccccCCcc
Q 044626 304 RDSVVGDGCIINR-CKIKGT----------------VIGMRTRIGDGAVIEDSVIMGA-DFYQQGEDIQSSGKCINHKAI 365 (429)
Q Consensus 304 ~~~~ig~~~~i~~-~~v~~~----------------~ig~~~~ig~~~~i~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 365 (429)
.++.||++|+|++ +.+.++ +||++|.||+++.|.++++++. ..++++....+
T Consensus 291 ~~~~ig~~~~I~~~~~i~~~~ig~~~~i~~~~i~~~~Ig~~~~Ig~~~~i~~~~~ig~~~~Ig~~~~i~~---------- 360 (468)
T 1hm9_A 291 GQTKIGAETVLTNGTYVVDSTIGAGAVITNSMIEESSVADGVTVGPYAHIRPNSSLGAQVHIGNFVEVKG---------- 360 (468)
T ss_dssp SSCEECTTCEECTTCEEESCEECTTCEECSCEEESCEECTTCEECSSCEECSSCEECTTCEEEEEEEEES----------
T ss_pred CCCEECCCCEECCCCEEeccEEeCCcEEEEEEEeccccCCCcEECCceEEecCcEECCccEECCCcEEee----------
Confidence 3445555555554 444444 4444445555554443333222 11222111111
Q ss_pred eeEeCCCCee------cceEEecCcEECCCcEEecCCCCCC-CeeecCCeEEccCE-----EEEcCCCEeCCCccC
Q 044626 366 PVGIGEDTQI------KKAVIDKNARIGKNVLIINKDGVQE-GDREANGYIISEGI-----VVIIHGAEIADGSII 429 (429)
Q Consensus 366 ~~~ig~~~~i------~~~~ig~~~~ig~~~~i~~~~~~~~-~~~~~~~~~i~~~~-----~~i~~~~~i~~~~vv 429 (429)
+.||+++.+ .++.||++|.||+++++.+.++..+ ..++|++++||+++ +.||+++.|++||+|
T Consensus 361 -~~Ig~~~~i~~~~~i~~~~Ig~~~~Ig~~~~i~~~~~~~~~~~~Ig~~~~Ig~~~~i~~~v~Ig~~~~i~~~s~v 435 (468)
T 1hm9_A 361 -SSIGENTKAGHLTYIGNCEVGSNVNFGAGTITVNYDGKNKYKTVIGDNVFVGSNSTIIAPVELGDNSLVGAGSTI 435 (468)
T ss_dssp -CEECTTCEEEEEEEEESEEECTTCEECTTCEEECBCSSCBCCEEECTTCEECTTCEEESSCEECTTCEECTTCEE
T ss_pred -eEEcCCcEeCCceEEccccccCCcEECCCcEEecCcCccCCCcEECCCeEECCCCEEeCCcEECCCCEECCCCEE
Confidence 234444443 4567888899999988877554443 34556666666552 567888888888764
No 6
>4fce_A Bifunctional protein GLMU; GLMU. csgid, niaid, structural genomics, national institute allergy and infectious diseases; HET: GP1; 1.96A {Yersinia pseudotuberculosis} PDB: 3fww_A 1hv9_A* 2oi5_A* 2oi6_A* 2oi7_A* 1fxj_A* 1fwy_A*
Probab=100.00 E-value=6.4e-44 Score=360.36 Aligned_cols=383 Identities=16% Similarity=0.187 Sum_probs=259.4
Q ss_pred CeEEEEEcCCCCCCcccccccccccccccCCcchhHHHHHHhhHhcCCCeEEEEeecChhHHHHHHhccccCcccCCCCc
Q 044626 1 SVAAVVFGDGSESRLYPLTKRRSEGAIPLAANYRLVDAVVSNCINSNINKIYALTQFNSTSLNLHLSRAFSGILRGKDGF 80 (429)
Q Consensus 1 ~m~avIla~G~gsRl~plt~~~pK~Llpi~g~~plI~~~i~~l~~~gi~~I~Iv~~~~~~~i~~~l~~~~~~~~~~~~~~ 80 (429)
+|.|||||||.|+||++ .+||+|+|++|+ |||+|+++.|.++++++|+|+++++.+++.+++.+. +
T Consensus 8 ~~~aiIlA~G~g~Rl~~---~~pK~l~~i~g~-pli~~~l~~l~~~~~~~i~vv~~~~~~~i~~~~~~~----~------ 73 (459)
T 4fce_A 8 SMSVVILAAGKGTRMYS---DLPKVLHPLAGK-PMVQHVIDAAMKLGAQHVHLVYGHGGELLKKTLADP----S------ 73 (459)
T ss_dssp CEEEEEEECCCCGGGCC---SSCGGGSEETTE-EHHHHHHHHHHHHTCSCEEEEESSCHHHHHHHC--------------
T ss_pred cceEEEECCCCCccCCC---CCCcccCeeCCe-eHHHHHHHHHHhCCCCcEEEEeCCCHHHHHHHhccC----C------
Confidence 47899999999999996 689999999999 999999999999999999999999888888887652 1
Q ss_pred EEEEeccccccccCcccCcHHHHHHHHHHhhcCCCCeEEEEcCce--eEeccHHHHHHHHHhcCCceEEEEEeccCCCCC
Q 044626 81 VEVIAAYQSLEDQDWFQGNADAIRRCLWVLEEYPVTEFLILPGHH--LYKMDYQRLIEAHRNNKADITIVALNAIRDKHP 158 (429)
Q Consensus 81 v~i~~~~~~~~~~~~~~Gt~~al~~~~~~i~~~~~~~~lvl~gD~--i~~~~l~~~~~~~~~~~~~~ti~~~~~~~~~~~ 158 (429)
+.++. +. +..|++++++.+++++.. .++|++++||. +....+..+++.|++ .+++++..+. +++.
T Consensus 74 ~~~v~--~~-----~~~g~~~~i~~~~~~~~~--~~~~lv~~~D~P~i~~~~i~~l~~~~~~--~~~~~~~~~~--~~~~ 140 (459)
T 4fce_A 74 LNWVL--QA-----EQLGTGHAMQQAAPHFAD--DEDILMLYGDVPLISVDTLQRLLAAKPE--GGIGLLTVKL--DNPS 140 (459)
T ss_dssp -CEEE--CS-----SCCCHHHHHHHHGGGSCT--TSEEEEEETTCTTCCHHHHHHHHHHCCT--TSEEEEEEEC--SCCT
T ss_pred cEEEe--CC-----CCCCcHHHHHHHHHhcCC--CCcEEEEeCCcccCCHHHHHHHHHHHhh--CCEEEEEEec--CCCC
Confidence 11221 21 247999999999988762 38999999999 447778999998865 4555655443 4677
Q ss_pred CccEEEEcCCCCEEEEEecCcccccccccCCCCCCCCCCCCCCcceeeEEEEcHHHHHHHHHhhCC---CCcccccccch
Q 044626 159 GFGLLRVNPVNQVIEFSMKSERETITSISGKSSRKSDSVASGNFPSMGIYLINRDTMSRLLKEYLP---EATDLGSEVIP 235 (429)
Q Consensus 159 ~~g~v~~d~~~~v~~~~ek~~~~~~~~~~~~~~~~~~~~~~~~~~~~Giy~~~~~~l~~~l~~~~~---~~~~~~~d~l~ 235 (429)
.|+.+..+ ++++..+.+|+..... ...+++.++|+|+|+++.|.++++.... ....+..++++
T Consensus 141 ~~g~v~~~-~g~v~~~~ek~~~~~~-------------~~~~~~~~~Giy~~~~~~l~~~l~~~~~~~~~~~~~~~d~~~ 206 (459)
T 4fce_A 141 GYGRIVRE-NGDVVGIVEHKDASDA-------------QREINEINTGILVANGRDLKRWLSLLDNNNAQGEFYITDIIA 206 (459)
T ss_dssp TSCEEEEE-TTEEEEEECGGGCCTT-------------GGGCCEEEEEEEEEEHHHHHHHHHTCCCCSTTCSCCTTHHHH
T ss_pred cccEEEeC-CCcEEEEEECCCCChH-------------HhhccEEEEEEEEEEHHHHHHHHHHhCccccCCcEEHHHHHH
Confidence 89988887 7899999998643210 0135789999999999988767765321 22344578899
Q ss_pred hcccCCceEEEEEecceE--EecCCHHHHHHHhHhhhccc------------CCCcceeCCCCceecCCccCCCeEEe--
Q 044626 236 AAISIGMKVEAYLFDGYW--EDMRSIEAFYHANMECIKRS------------NMRYNFYDRDCPVYTMPRCLPPTMIR-- 299 (429)
Q Consensus 236 ~l~~~g~~i~~~~~~~~~--~~i~t~~~~~~an~~~l~~~------------~~~~~~~~~~~~~~~~~~i~~~~~i~-- 299 (429)
.+.+.|.++..++.+++| ++++||+||..++..+..+. .|+..++++++.+++++.|+|.+.+.
T Consensus 207 ~~~~~g~~v~~~~~~~~~~~~~I~tp~Dl~~ae~~l~~~~~~~l~~~~~~~~~p~~~~~~~~~~ig~~~~i~~~~~i~~~ 286 (459)
T 4fce_A 207 LAHADGKKIATVHPTRLSEVEGVNNRLQLSALERVFQTEQAEKLLLAGVMLLDPSRFDLRGELTHGRDITIDTNVIIEGH 286 (459)
T ss_dssp HHHHTTCCEEEECCSSGGGGCCCSSHHHHHHHHHHHHHHHHHHHHHHTCEESCGGGEEEEEEEEECSSCEECTTEEEEEE
T ss_pred HHHHCCCeEEEEEcCCHHHhhCCCCHHHHHHHHHHHHHHHHHHHHhCCcEEeCCCeEEEeCcEEECCCcEECCCeeeccc
Confidence 988888899999998755 67999999999986654332 12233344555555555555555552
Q ss_pred -----------eeEeeCeEECCCcEEcc-eEeeCcEEcCCcEECCCCEEecCeEECC-cccccccccccCCccccCCcce
Q 044626 300 -----------EAVIRDSVVGDGCIINR-CKIKGTVIGMRTRIGDGAVIEDSVIMGA-DFYQQGEDIQSSGKCINHKAIP 366 (429)
Q Consensus 300 -----------~~~i~~~~ig~~~~i~~-~~v~~~~ig~~~~ig~~~~i~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 366 (429)
++.+.++.||++|.|++ +.+.+++||++|.||+++.|..++++++ ..++.+....++. .+..
T Consensus 287 ~~ig~~~~I~~~~~i~~~~Ig~~~~I~~~~~i~~~~Ig~~~~ig~~~~i~~~~~ig~~~~Ig~~~~i~~~~-----i~~~ 361 (459)
T 4fce_A 287 VILGDRVRIGTGCVLKNCVIGDDSEISPYTVLEDARLDANCTVGPFARLRPGAELAEGAHVGNFVEIKKAR-----LGKG 361 (459)
T ss_dssp EEECTTCEECTTCEEESCEECTTCEECSSCEEESCEECTTCEECSSEEECTTCEECTTCEEEEEEEEEEEE-----ECTT
T ss_pred eEECCCCEECCCCEEeccEECCCCEECCCcEEeCCEECCCCEECCccEECCCcEECCCcEECCCeEEeeeE-----EcCC
Confidence 23334455555555555 5555555555555555555543333332 1122222221111 0000
Q ss_pred eEeCCCCeecceEEecCcEECCCcEEecCCCCCCC-eeecCCeEEccCE-----EEEcCCCEeCCCccC
Q 044626 367 VGIGEDTQIKKAVIDKNARIGKNVLIINKDGVQEG-DREANGYIISEGI-----VVIIHGAEIADGSII 429 (429)
Q Consensus 367 ~~ig~~~~i~~~~ig~~~~ig~~~~i~~~~~~~~~-~~~~~~~~i~~~~-----~~i~~~~~i~~~~vv 429 (429)
+.|++.+.+.++.||++|.||+++++.+..++.++ .++|++++||+++ +.||++++|++||+|
T Consensus 362 ~~i~~~~~i~~~~Ig~~~~ig~~~~i~~~~~~~~~~v~Ig~~~~IG~~~~I~~gv~Ig~~~~igagsvV 430 (459)
T 4fce_A 362 SKAGHLSYLGDAEIGAGVNIGAGTITCNYDGANKFKTIIGDDVFVGSDTQLVAPVTVANGATIGAGTTV 430 (459)
T ss_dssp CEEEEEEEEEEEEECTTCEECTTCEEECBCSSCBCCEEECTTCEECTTCEEESSEEECTTCEECTTCEE
T ss_pred CEECCceEECCeEECCCCEECCCCEEeccccccCCCCEECCCeEEcCCCEEcCCcEECCCCEECCCCEE
Confidence 23333344456789999999999999886666553 4556666665553 788888888888875
No 7
>2v0h_A Bifunctional protein GLMU; cell WALL, magnesium, cell shape, transferase, peptidoglycan synthesis, associative mechanism; 1.79A {Haemophilus influenzae} PDB: 2v0i_A* 2v0j_A* 2v0k_A* 2v0l_A* 2vd4_A* 2w0v_A* 2w0w_A* 3twd_A*
Probab=100.00 E-value=1.8e-42 Score=349.47 Aligned_cols=380 Identities=17% Similarity=0.217 Sum_probs=258.4
Q ss_pred CeEEEEEcCCCCCCcccccccccccccccCCcchhHHHHHHhhHhcCCCeEEEEeecChhHHHHHHhccccCcccCCCCc
Q 044626 1 SVAAVVFGDGSESRLYPLTKRRSEGAIPLAANYRLVDAVVSNCINSNINKIYALTQFNSTSLNLHLSRAFSGILRGKDGF 80 (429)
Q Consensus 1 ~m~avIla~G~gsRl~plt~~~pK~Llpi~g~~plI~~~i~~l~~~gi~~I~Iv~~~~~~~i~~~l~~~~~~~~~~~~~~ 80 (429)
+|.|||||||.|+||++ .+||+|+|++|+ |||+|+|+.|.++++++|+|+++++.+++.+++.+. +
T Consensus 5 ~~~aiIlA~G~g~Rl~~---~~pK~l~~i~gk-pli~~~l~~l~~~~~~~iivv~~~~~~~i~~~~~~~----~------ 70 (456)
T 2v0h_A 5 ALSAVILAAGKGTRMYS---DLPKVLHTIAGK-PMVKHVIDTAHQLGSENIHLIYGHGGDLMRTHLANE----Q------ 70 (456)
T ss_dssp CEEEEEECCCCCGGGCS---SSCGGGSEETTE-EHHHHHHHHHHHTTCSCEEEEECTTHHHHHHHTTTC----C------
T ss_pred cceEEEECCCCCcccCC---CCCccccEECCc-cHHHHHHHHHHhCCCCcEEEEeCCCHHHHHHHhhcC----C------
Confidence 46899999999999984 689999999999 999999999999999999999998878888887652 1
Q ss_pred EEEEeccccccccCcccCcHHHHHHHHHHhhcCCCCeEEEEcCce--eEeccHHHHHHHHHhcCCceEEEEEeccCCCCC
Q 044626 81 VEVIAAYQSLEDQDWFQGNADAIRRCLWVLEEYPVTEFLILPGHH--LYKMDYQRLIEAHRNNKADITIVALNAIRDKHP 158 (429)
Q Consensus 81 v~i~~~~~~~~~~~~~~Gt~~al~~~~~~i~~~~~~~~lvl~gD~--i~~~~l~~~~~~~~~~~~~~ti~~~~~~~~~~~ 158 (429)
++++. +. ++.|++++++.+++++.. .+.|++++||. +...+++.+++.|++ ++++++..+.. ++.
T Consensus 71 ~~~v~--~~-----~~~g~~~~~~~~~~~~~~--~~~vlv~~~D~P~i~~~~i~~l~~~~~~--~~~~~~~~~~~--~~~ 137 (456)
T 2v0h_A 71 VNWVL--QT-----EQLGTAHAVQQAAPFFKD--NENIVVLYGDAPLITKETLEKLIEAKPE--NGIALLTVNLD--NPT 137 (456)
T ss_dssp CEEEE--CS-----CCCCHHHHHHHHGGGCCT--TSEEEEEETTCTTCCHHHHHHHHHHCCT--TSEEEEEEECS--SCT
T ss_pred cEEEe--CC-----CCCCcHHHHHHHHHhcCC--CCeEEEEcCCcceeCHHHHHHHHHHHhc--CCEEEEEeecC--CCC
Confidence 22321 21 247999999999887752 38999999999 447788999998865 56666655543 567
Q ss_pred CccEEEEcCCCCEEEEEecCcccccccccCCCCCCCCCCCCCCcceeeEEEEcHHHHHHHHHhhCCC---Ccccccccch
Q 044626 159 GFGLLRVNPVNQVIEFSMKSERETITSISGKSSRKSDSVASGNFPSMGIYLINRDTMSRLLKEYLPE---ATDLGSEVIP 235 (429)
Q Consensus 159 ~~g~v~~d~~~~v~~~~ek~~~~~~~~~~~~~~~~~~~~~~~~~~~~Giy~~~~~~l~~~l~~~~~~---~~~~~~d~l~ 235 (429)
.|+.+..+ ++++..+.||+...... ..+.+.++|+|+|+++.|.+.++..... ...+..++++
T Consensus 138 ~~g~v~~~-~g~v~~~~ek~~~~~~~-------------~~~~~~~~Giy~~~~~~l~~~l~~~~~~~~~~~~~~~d~~~ 203 (456)
T 2v0h_A 138 GYGRIIRE-NGNVVAIVEQKDANAEQ-------------LNIKEVNTGVMVSDGASFKKWLARVGNNNAQGEYYLTDLIA 203 (456)
T ss_dssp TSCEEEEE-TTEEEEEECTTTCCHHH-------------HTCCEEEEEEEEEEHHHHHHHHTTCCCCSTTCCCCGGGHHH
T ss_pred ccceEEEc-CCcEEEEEECCCCChhH-------------hcCcEEEEEEEEEEHHHHHHHHHHhccccccccEEHHHHHH
Confidence 78888877 78999999986521100 0346889999999999876677643222 2334578888
Q ss_pred hcccCCceEEEEEecce--EEecCCHHHHHHHhHhhhccc------------CCCcceeCCCCceecCCccCCCeEEeee
Q 044626 236 AAISIGMKVEAYLFDGY--WEDMRSIEAFYHANMECIKRS------------NMRYNFYDRDCPVYTMPRCLPPTMIREA 301 (429)
Q Consensus 236 ~l~~~g~~i~~~~~~~~--~~~i~t~~~~~~an~~~l~~~------------~~~~~~~~~~~~~~~~~~i~~~~~i~~~ 301 (429)
.+.+.+.++..++.+++ |++++||+||.++++.+..+. .++.+++++.+.+++++.|++++.+.
T Consensus 204 ~~~~~g~~v~~~~~~~~~~~~~I~tpeDl~~a~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~ig~~~~I~~~~~i~-- 281 (456)
T 2v0h_A 204 LANQDNCQVVAVQATDVMEVEGANNRLQLAALERYFQNKQASKLLLEGVMIYDPARFDLRGTLEHGKDVEIDVNVIIE-- 281 (456)
T ss_dssp HHHHTTCCEEEEECSCTGGGCCCSSHHHHHHHHHHHHHHHHHHHHHTTCEESCGGGEEEEEEEEECSSCEECSSEEEE--
T ss_pred HHHHcCCEEEEEEeCCcceEEeCCCHHHHHHHHHHHHHHHHHHHHHcCCEEECCCccEEcCceEECCCCEEcCCcEEc--
Confidence 88887788999998654 578999999999988665432 11233455555566666666655553
Q ss_pred EeeCeEECCCcEEcc-eEeeCcEEcCCcEECCCCEEecCeEECCcccccccccccCCccccCCcceeE-----------e
Q 044626 302 VIRDSVVGDGCIINR-CKIKGTVIGMRTRIGDGAVIEDSVIMGADFYQQGEDIQSSGKCINHKAIPVG-----------I 369 (429)
Q Consensus 302 ~i~~~~ig~~~~i~~-~~v~~~~ig~~~~ig~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------i 369 (429)
+++.||++|.|++ +.+.+++||++|.|++++.|.++.+..+..++.+.....-.+ .+..+. |
T Consensus 282 --~~~~Ig~~~~I~~~~~i~~~~ig~~~~I~~~~~i~~~~ig~~~~I~~~~~i~~~~~----ig~~~~ig~~~~i~~~~i 355 (456)
T 2v0h_A 282 --GNVKLGDRVKIGTGCVLKNVVIGNDVEIKPYSVLEDSIVGEKAAIGPFSRLRPGAE----LAAETHVGNFVEIKKSTV 355 (456)
T ss_dssp --EEEEECTTCEECTTCEEEEEEECTTCEECSSCEEEEEEECTTCEECSSEEECTTCE----ECTTCEEEEEEEEESCEE
T ss_pred --CCcEECCCCEECCCCEEEeEEEeCCCEEcCCeEEccCcCCCCcEECCccEECCCCE----ECCCCEECCCCEEeccEE
Confidence 3566666666666 666666666666666666664433322222222111110000 000022 3
Q ss_pred CCCCee------cceEEecCcEECCCcEEecCCCCCC-CeeecCCeEEccCE-----EEEcCCCEeCCCccC
Q 044626 370 GEDTQI------KKAVIDKNARIGKNVLIINKDGVQE-GDREANGYIISEGI-----VVIIHGAEIADGSII 429 (429)
Q Consensus 370 g~~~~i------~~~~ig~~~~ig~~~~i~~~~~~~~-~~~~~~~~~i~~~~-----~~i~~~~~i~~~~vv 429 (429)
++++.+ .++.||++|.||+++++.+..+... +.++|++++||+++ +.||++++|++||+|
T Consensus 356 ~~~~~i~~~~~~~~~~Ig~~v~Ig~~~~i~~~~~~~~~~v~Ig~~~~Ig~~~~i~~~v~Ig~~~~ig~~s~v 427 (456)
T 2v0h_A 356 GKGSKVNHLTYVGDSEIGSNCNIGAGVITCNYDGANKFKTIIGDDVFVGSDTQLVAPVKVANGATIGAGTTI 427 (456)
T ss_dssp CTTCEEEEEEEEESEEECTTCEECTTCEEEECSSSSCCCEEECSSCEECTTCEEEESEEECTTCEECTTCEE
T ss_pred CCCCEeccceeecCcEECCCcEECCceEEeccccccCCCcEECCCCEECCCCEEcCCcEECCCCEECCCCEE
Confidence 333333 3468899999999999887444332 34455555555442 778888888888875
No 8
>3juk_A UDP-glucose pyrophosphorylase (GALU); transfer; HET: UPG; 2.30A {Helicobacter pylori} PDB: 3juj_A*
Probab=100.00 E-value=1.6e-35 Score=279.68 Aligned_cols=245 Identities=16% Similarity=0.237 Sum_probs=197.0
Q ss_pred CeEEEEEcCCCCCCcccccccccccccccCCcchhHHHHHHhhHhcCCCeEEEEeecChhHHHHHHhccccCcccCC--C
Q 044626 1 SVAAVVFGDGSESRLYPLTKRRSEGAIPLAANYRLVDAVVSNCINSNINKIYALTQFNSTSLNLHLSRAFSGILRGK--D 78 (429)
Q Consensus 1 ~m~avIla~G~gsRl~plt~~~pK~Llpi~g~~plI~~~i~~l~~~gi~~I~Iv~~~~~~~i~~~l~~~~~~~~~~~--~ 78 (429)
.|+|||||||.|+||+|+|..+||+|+||+|+ |||+|+|+++.++|+++|+|+++++.+++.+|+.+.+. +.... .
T Consensus 2 ~~~avIlAaG~gtRl~plt~~~pK~ll~i~gk-pli~~~l~~l~~~gi~~i~vv~~~~~~~i~~~~~~~~~-l~~~l~~~ 79 (281)
T 3juk_A 2 IKKCLFPAAGYGTRFLPITKTIPKEMLPIVDK-PLIQYAVEEAMEAGCEVMAIVTGRNKRSLEDYFDTSYE-IEHQIQGT 79 (281)
T ss_dssp CCEEEEECCSCCGGGTTGGGTSCGGGCBSSSS-BHHHHHHHHHHHHTCCEEEEEECTTHHHHHHHTSCCC---------C
T ss_pred ceEEEEECCcCCcccCccccCCCcccceECCE-EHHHHHHHHHHhCCCCEEEEEecCCHHHHHHHHhcchh-hhhhhhcc
Confidence 47999999999999999999999999999999 99999999999999999999999999999999976532 11100 0
Q ss_pred -------------CcEEEEeccccccccCcccCcHHHHHHHHHHhhcCCCCeEEEEcCceeEecc-----HHHHHHHHHh
Q 044626 79 -------------GFVEVIAAYQSLEDQDWFQGNADAIRRCLWVLEEYPVTEFLILPGHHLYKMD-----YQRLIEAHRN 140 (429)
Q Consensus 79 -------------~~v~i~~~~~~~~~~~~~~Gt~~al~~~~~~i~~~~~~~~lvl~gD~i~~~~-----l~~~~~~~~~ 140 (429)
..+.+.+..+. ++.|++++++++++++.+ ++|+|++||++++.+ +.++++.|++
T Consensus 80 ~~~~~~~~~~~~~~~~~i~~~~~~-----~~~Gt~~al~~a~~~l~~---~~~lv~~~D~~~~~~~~~~~l~~l~~~~~~ 151 (281)
T 3juk_A 80 NKENALKSIRNIIEKCCFSYVRQK-----QMKGLGHAILTGEALIGN---EPFAVILADDLCISHDHPSVLKQMTSLYQK 151 (281)
T ss_dssp CHHHHHHHHHHHHHHCEEEEEECS-----SCCCHHHHHHHTHHHHCS---SCEEEECTTEEEECTTSCCHHHHHHHHHHH
T ss_pred cchhhhhhhhccccCccEEEEecC-----CCCCcHHHHHHHHHHcCC---CCEEEEeCCeeccCccchHHHHHHHHHHHH
Confidence 01234333332 358999999999999863 899999999988887 9999999988
Q ss_pred cCCceEEEEEeccCCCCCCccEEEEcC--CC--CEEEEEecCcccccccccCCCCCCCCCCCCCCcceeeEEEEcHHHHH
Q 044626 141 NKADITIVALNAIRDKHPGFGLLRVNP--VN--QVIEFSMKSERETITSISGKSSRKSDSVASGNFPSMGIYLINRDTMS 216 (429)
Q Consensus 141 ~~~~~ti~~~~~~~~~~~~~g~v~~d~--~~--~v~~~~ek~~~~~~~~~~~~~~~~~~~~~~~~~~~~Giy~~~~~~l~ 216 (429)
.++ .++++...+.+++..||++..++ +| +|..+.|||.... ..++++++|+|+|++++|+
T Consensus 152 ~~~-~~v~~~~~~~~~~~~~g~v~~~~~~~g~~~v~~~~Ekp~~~~---------------~~~~~~~~GiYi~~~~~l~ 215 (281)
T 3juk_A 152 YQC-SIVAIEEVALEEVSKYGVIRGEWLEEGVYEIKDMVEKPNQED---------------APSNLAVIGRYILTPDIFE 215 (281)
T ss_dssp HCS-CEEEEEECCTTTGGGSEEEEEEEEETTEEEEEEEEESCCTTT---------------CSCSEEEEEEEEECTTHHH
T ss_pred cCC-CEEEEEEechhhcccCCEEEeccCCCCceEEeEEEECcCCCC---------------CCcceeEEEEEEECHHHHH
Confidence 777 66666666656788999999886 77 9999999986321 1357899999999999986
Q ss_pred HHHHhhCCC--CcccccccchhcccCCceEEEEEecceEEecCCHHHHHHHhHhhhccc
Q 044626 217 RLLKEYLPE--ATDLGSEVIPAAISIGMKVEAYLFDGYWEDMRSIEAFYHANMECIKRS 273 (429)
Q Consensus 217 ~~l~~~~~~--~~~~~~d~l~~l~~~g~~i~~~~~~~~~~~i~t~~~~~~an~~~l~~~ 273 (429)
.+++..++ ......++++.+++++ ++.+|+++++|.||+||++|.+|++.++...
T Consensus 216 -~l~~~~~~~~~e~~l~d~i~~l~~~~-~v~~~~~~g~~~dIgt~~d~~~a~~~l~~~~ 272 (281)
T 3juk_A 216 -ILSETKPGKNNEIQITDALRTQAKRK-RIIAYQFKGKRYDCGSVEGYIEASNAYYKKR 272 (281)
T ss_dssp -HHHTCCCCGGGSCCHHHHHHHHHHHS-CCEEEECCSEEEETTSHHHHHHHHHHHHHHH
T ss_pred -HHHhcCCCCCCceeHHHHHHHHHhcC-CEEEEEeCCeEEcCCCHHHHHHHHHHHHhch
Confidence 66653211 1222478999998875 8999999999999999999999999998754
No 9
>4ecm_A Glucose-1-phosphate thymidylyltransferase; HET: DAU; 2.30A {Bacillus anthracis} PDB: 3hl3_A*
Probab=100.00 E-value=1.9e-33 Score=263.69 Aligned_cols=235 Identities=19% Similarity=0.308 Sum_probs=193.5
Q ss_pred CeEEEEEcCCCCCCcccccccccccccccCCcchhHHHHHHhhHhcCCCeEEEEeecC-hhHHHHHHhccccCcccCCCC
Q 044626 1 SVAAVVFGDGSESRLYPLTKRRSEGAIPLAANYRLVDAVVSNCINSNINKIYALTQFN-STSLNLHLSRAFSGILRGKDG 79 (429)
Q Consensus 1 ~m~avIla~G~gsRl~plt~~~pK~Llpi~g~~plI~~~i~~l~~~gi~~I~Iv~~~~-~~~i~~~l~~~~~~~~~~~~~ 79 (429)
+|+|||||||.|+||+|+|..+||+|+|++|+ |||+|+|++|.++|+++|+|+++++ .+++.+++.+... |+.+
T Consensus 24 ~m~aiIlAaG~g~Rl~~lt~~~pK~ll~i~g~-pli~~~l~~l~~~g~~~iivv~~~~~~~~~~~~~~~~~~-~~~~--- 98 (269)
T 4ecm_A 24 AMKGIILAGGTGSRLYPITKVTNKHLLPVGRY-PMIYHAVYKLKQCDITDIMIITGKEHMGDVVSFLGSGQE-FGVS--- 98 (269)
T ss_dssp CEEEEEECCSCCGGGTTTTSSSCGGGSEETTE-EHHHHHHHHHHHTTCCEEEEEECTTTHHHHHHHHTTSGG-GTCE---
T ss_pred CcEEEEECCCCccccccccCCCCceecEECCE-EHHHHHHHHHHHCCCCEEEEECChhhHHHHHHHHhhccc-cCce---
Confidence 48999999999999999999999999999999 9999999999999999999999975 4678888875433 3332
Q ss_pred cEEEEeccccccccCcccCcHHHHHHHHHHhhcCCCCeEEEEcCceeEeccHHHHHHHHHhcCCceEEEEEeccCCCCCC
Q 044626 80 FVEVIAAYQSLEDQDWFQGNADAIRRCLWVLEEYPVTEFLILPGHHLYKMDYQRLIEAHRNNKADITIVALNAIRDKHPG 159 (429)
Q Consensus 80 ~v~i~~~~~~~~~~~~~~Gt~~al~~~~~~i~~~~~~~~lvl~gD~i~~~~l~~~~~~~~~~~~~~ti~~~~~~~~~~~~ 159 (429)
+.+..+. ++.|++++++.+++++. .++|++++||+++..++.++++.|+++++++++++.+.. ++..
T Consensus 99 ---i~~~~~~-----~~~G~~~al~~a~~~~~---~~~~lv~~~D~~~~~~l~~l~~~~~~~~~~~~~~~~~~~--~~~~ 165 (269)
T 4ecm_A 99 ---FTYRVQD-----KAGGIAQALGLCEDFVG---NDRMVVILGDNIFSDDIRPYVEEFTNQKEGAKVLLQSVD--DPER 165 (269)
T ss_dssp ---EEEEECS-----SCCCHHHHHHTTHHHHT---TSEEEEEETTEEESSCSHHHHHHHHTSSSSEEEEEEECS--CGGG
T ss_pred ---EEEeeCC-----ccCcHHHHHHHHHHhcC---CCcEEEEeCCccCccCHHHHHHHHHhcCCCeEEEEEECC--CCCC
Confidence 3332222 24799999999998886 389999999999898999999999988888888876654 5678
Q ss_pred ccEEEEcCCCCEEEEEecCcccccccccCCCCCCCCCCCCCCcceeeEEEEcHHHHHHHHHhhCCC-Cccc-ccccchhc
Q 044626 160 FGLLRVNPVNQVIEFSMKSERETITSISGKSSRKSDSVASGNFPSMGIYLINRDTMSRLLKEYLPE-ATDL-GSEVIPAA 237 (429)
Q Consensus 160 ~g~v~~d~~~~v~~~~ek~~~~~~~~~~~~~~~~~~~~~~~~~~~~Giy~~~~~~l~~~l~~~~~~-~~~~-~~d~l~~l 237 (429)
||++..+ +|+|..+.|||..+ .++++++|+|+|++++|+ .+++..++ ..++ ..++++.+
T Consensus 166 ~g~v~~d-~g~v~~~~ekp~~~-----------------~~~~~~~Giy~~~~~~l~-~l~~~~~~~~ge~~l~d~l~~l 226 (269)
T 4ecm_A 166 FGVANIQ-NRKIIEIEEKPKEP-----------------KSSYAVTGIYLYDSKVFS-YIKELKPSARGELEITDINNWY 226 (269)
T ss_dssp SEEEEEE-TTEEEEEEESCSSC-----------------SCSEEEEEEEEECTTHHH-HHTSCCBCTTSCBCHHHHHHHH
T ss_pred ceEEEEc-CCEEEEEEECCCCC-----------------CCcEEEEEEEEECHHHHH-hhhhcCCCCCCeeeHHHHHHHH
Confidence 9999887 48999999997543 467899999999999885 55543221 2223 47889999
Q ss_pred ccCCceEEEEEecceEEecCCHHHHHHHhHhhhccc
Q 044626 238 ISIGMKVEAYLFDGYWEDMRSIEAFYHANMECIKRS 273 (429)
Q Consensus 238 ~~~g~~i~~~~~~~~~~~i~t~~~~~~an~~~l~~~ 273 (429)
++++ ++.++..+++|.||+||++|.++++.+++..
T Consensus 227 ~~~g-~v~~~~~~~~~~dIgt~~dl~~a~~~l~~~~ 261 (269)
T 4ecm_A 227 LKRG-VLTYNEMSGWWTDAGTHVSLQRANALARDIN 261 (269)
T ss_dssp HHTT-CEEEEECCSCEEECSSHHHHHHHHHHTTTCC
T ss_pred HHcC-CEEEEEeCCEEEeCCCHHHHHHHHHHHHhcc
Confidence 8876 8999999999999999999999999988654
No 10
>2ux8_A Glucose-1-phosphate uridylyltransferase; UGPG, GALU pyrophosphorylase, nucleotidyltransferase; HET: G1P; 2.65A {Sphingomonas elodea}
Probab=100.00 E-value=4.6e-32 Score=257.94 Aligned_cols=244 Identities=18% Similarity=0.204 Sum_probs=170.8
Q ss_pred CeEEEEEcCCCCCCcccccccccccccccCCcchhHHHHHHhhHhcCCCeEEEEeecChhHHHHHHhccccC------cc
Q 044626 1 SVAAVVFGDGSESRLYPLTKRRSEGAIPLAANYRLVDAVVSNCINSNINKIYALTQFNSTSLNLHLSRAFSG------IL 74 (429)
Q Consensus 1 ~m~avIla~G~gsRl~plt~~~pK~Llpi~g~~plI~~~i~~l~~~gi~~I~Iv~~~~~~~i~~~l~~~~~~------~~ 74 (429)
.|+|||||||.|+||+|+|..+||+|+|++|+ |||+|+++++.++|+++|+|+++++.+++.+++.+.+.. .+
T Consensus 14 ~~~avIlAaG~gtRl~plt~~~pK~ll~i~gk-pli~~~l~~l~~~g~~~i~vv~~~~~~~i~~~~~~~~~l~~~l~~~~ 92 (297)
T 2ux8_A 14 LRKAVFPVAGLGTRFLPATKAMPKEMLPVVDR-PLIQYAVDEAVEAGIEQMIFVTGRGKSALEDHFDIAYELEATMAARG 92 (297)
T ss_dssp CCEEEEEECCCCGGGTTTTSSSCGGGCEETTE-EHHHHHHHHHHHTTCCEEEEEECTTCHHHHHHTSCCHHHHHHHHTTT
T ss_pred ccEEEEECCCCccccCccccCCCceeeeECCe-EHHHHHHHHHHhCCCCEEEEEeCCCHHHHHHHHhhhhhhhhhhhhcc
Confidence 47899999999999999999999999999999 999999999999999999999999888899988753200 00
Q ss_pred ---------cCCCCcEEEEeccccccccCcccCcHHHHHHHHHHhhcCCCCeEEEEcCceeEe---ccHHHHHHHHHhcC
Q 044626 75 ---------RGKDGFVEVIAAYQSLEDQDWFQGNADAIRRCLWVLEEYPVTEFLILPGHHLYK---MDYQRLIEAHRNNK 142 (429)
Q Consensus 75 ---------~~~~~~v~i~~~~~~~~~~~~~~Gt~~al~~~~~~i~~~~~~~~lvl~gD~i~~---~~l~~~~~~~~~~~ 142 (429)
...+..+.+. .+. ++.|++++++.+++++.+ ++|++++||++++ .++..+++.|++.+
T Consensus 93 ~~~~~~~~~~~~g~~i~~~--~~~-----~~~Gt~~al~~a~~~~~~---~~~lv~~~D~~~~~~~~~l~~l~~~~~~~~ 162 (297)
T 2ux8_A 93 KSLDVLDGTRLKPGNIAYV--RQQ-----EPMGLGHAVWCARDIVGD---EPFAVLLPDDFMFGQPGCLKQMVDAYNKVG 162 (297)
T ss_dssp CCGGGGTTSCCSTTSEEEE--ECC-----SCCCHHHHHHTTHHHHCS---SCEEEECTTEEEESSSCHHHHHHHHHHHHC
T ss_pred chhhhhhhcccCCCceEEE--eCC-----CCCChHHHHHHHHHHcCC---CcEEEEeCCeecCCChHHHHHHHHHHHhcC
Confidence 0000113222 221 357999999999988862 8999999999876 57899999998766
Q ss_pred CceEEEEEeccCCCCCCccEEEEcC--CC--CEEEEEecCcccccccccCCCCCCCCCCCCCCcceeeEEEEcHHHHHHH
Q 044626 143 ADITIVALNAIRDKHPGFGLLRVNP--VN--QVIEFSMKSERETITSISGKSSRKSDSVASGNFPSMGIYLINRDTMSRL 218 (429)
Q Consensus 143 ~~~ti~~~~~~~~~~~~~g~v~~d~--~~--~v~~~~ek~~~~~~~~~~~~~~~~~~~~~~~~~~~~Giy~~~~~~l~~~ 218 (429)
+ .++.+.+.+.+++..||++..++ ++ +|..|.|||.... ..+++.++|+|+|++++|+ .
T Consensus 163 ~-~~i~~~~~~~~~~~~yg~v~~~~~~~~~~~v~~~~ekp~~~~---------------~~~~~~~~Giyi~~~~~l~-~ 225 (297)
T 2ux8_A 163 G-NLICAEEVPDDQTHRYGIITPGTQDGVLTEVKGLVEKPAPGT---------------APSNLSVIGRYILQPEVMR-I 225 (297)
T ss_dssp S-EEEEEC-----------CCCCCCBCSSEEEC-----------------------------CCCEEEEEEECTHHHH-H
T ss_pred C-CEEEEEecCcccCCCCCeEEecccCCCceeEEEEEECCCCCC---------------CCccEEEEEEEEECHHHHH-H
Confidence 5 45555554434567898887653 45 8889999874211 0356889999999999885 5
Q ss_pred HHhhCCC--CcccccccchhcccCCceEEEEEecceEEecCCHHHHHHHhHhhhccc
Q 044626 219 LKEYLPE--ATDLGSEVIPAAISIGMKVEAYLFDGYWEDMRSIEAFYHANMECIKRS 273 (429)
Q Consensus 219 l~~~~~~--~~~~~~d~l~~l~~~g~~i~~~~~~~~~~~i~t~~~~~~an~~~l~~~ 273 (429)
+++..++ ......++++.+++++ ++.+++++++|.||+||++|.++++.++...
T Consensus 226 l~~~~~~~~~~~~l~d~i~~l~~~~-~v~~~~~~~~w~dIgt~~dl~~a~~~~~~~~ 281 (297)
T 2ux8_A 226 LENQGKGAGGEIQLTDAMQRMIGDQ-PFHGVTFQGTRYDCGDKAGFIQANLAVALSR 281 (297)
T ss_dssp HHHTC--------CCTTGGGGTTTS-CEEEEECSSEEEETTSHHHHHHHHHHHHHHC
T ss_pred HHhhCCCCCCeeEHHHHHHHHHhcC-CEEEEEecceEEeCCCHHHHHHHHHHHHhcC
Confidence 6554322 1223478899988875 8999999999999999999999998877544
No 11
>2e3d_A UTP--glucose-1-phosphate uridylyltransferase; UDP-glucose, carbohydrate, pyrophosphorylase; 1.95A {Escherichia coli}
Probab=100.00 E-value=9.3e-32 Score=256.47 Aligned_cols=243 Identities=20% Similarity=0.282 Sum_probs=186.4
Q ss_pred eEEEEEcCCCCCCcccccccccccccccCCcchhHHHHHHhhHhcCCCeEEEEeecChhHHHHHHhccccCc-ccCC---
Q 044626 2 VAAVVFGDGSESRLYPLTKRRSEGAIPLAANYRLVDAVVSNCINSNINKIYALTQFNSTSLNLHLSRAFSGI-LRGK--- 77 (429)
Q Consensus 2 m~avIla~G~gsRl~plt~~~pK~Llpi~g~~plI~~~i~~l~~~gi~~I~Iv~~~~~~~i~~~l~~~~~~~-~~~~--- 77 (429)
|+|||||||.|+||+|+|..+||+|+|++|+ |||+|++++|..+|+++|+|+++++.+++.+|+.+.+... .++.
T Consensus 9 ~~avIlAaG~gtRl~plt~~~pK~ll~i~gk-pli~~~l~~l~~~gi~~i~vv~~~~~~~i~~~~~~~~~l~~~l~~~~~ 87 (302)
T 2e3d_A 9 KKAVIPVAGLGTRMLPATKAIPKEMLPLVDK-PLIQYVVNECIAAGITEIVLVTHSSKNSIENHFDTSFELEAMLEKRVK 87 (302)
T ss_dssp CEEEEECCSCCGGGTTTTSSSCGGGCEETTE-EHHHHHHHHHHHTTCCEEEEEECGGGHHHHHHHSCCHHHHHHHC----
T ss_pred cEEEEECCcCcccCCccccCCCceeeEECCe-EHHHHHHHHHHHCCCCEEEEEeCCCHHHHHHHHhcchhhhhhhhhccc
Confidence 7899999999999999999999999999999 9999999999999999999999998888999987532100 0000
Q ss_pred -----------CCcEEEEeccccccccCcccCcHHHHHHHHHHhhcCCCCeEEEEcCceeEe-----c---cHHHHHHHH
Q 044626 78 -----------DGFVEVIAAYQSLEDQDWFQGNADAIRRCLWVLEEYPVTEFLILPGHHLYK-----M---DYQRLIEAH 138 (429)
Q Consensus 78 -----------~~~v~i~~~~~~~~~~~~~~Gt~~al~~~~~~i~~~~~~~~lvl~gD~i~~-----~---~l~~~~~~~ 138 (429)
...+++.+..+. ++.|++++++++++++.+ ++|++++||++++ . ++..+++.|
T Consensus 88 ~~~l~~~~~~~~~~~~i~~~~~~-----~~~Gt~~al~~a~~~~~~---~~~lv~~~D~~~~~~~~~~~~~~l~~l~~~~ 159 (302)
T 2e3d_A 88 RQLLDEVQSICPPHVTIMQVRQG-----LAKGLGHAVLCAHPVVGD---EPVAVILPDVILDEYESDLSQDNLAEMIRRF 159 (302)
T ss_dssp CHHHHHHHHTSCTTCEEEEEECS-----SCCCHHHHHHHTHHHHCS---SCEEEECTTEEECTTSSCTTTSTHHHHHHHH
T ss_pred hhhhhhhhhccccCcceEEeeCC-----ccCCHHHHHHHHHHHcCC---CcEEEEcCCccccCccccchHHHHHHHHHHH
Confidence 001223222221 357999999999998863 7999999999886 2 699999999
Q ss_pred HhcCCceEEEEEeccCCCCCCccEEEEc----CCC---CEEEEEecCcccccccccCCCCCCCCCCCCCCcceeeEEEEc
Q 044626 139 RNNKADITIVALNAIRDKHPGFGLLRVN----PVN---QVIEFSMKSERETITSISGKSSRKSDSVASGNFPSMGIYLIN 211 (429)
Q Consensus 139 ~~~~~~~ti~~~~~~~~~~~~~g~v~~d----~~~---~v~~~~ek~~~~~~~~~~~~~~~~~~~~~~~~~~~~Giy~~~ 211 (429)
++.++ +++++.+. +++..||++..+ ++| +|..|.|||.... ..+++.++|+|+|+
T Consensus 160 ~~~~~-~~i~~~~~--~~~~~yg~v~~~~~~~~~g~~~~v~~~~ekp~~~~---------------~~~~~~~~Giyi~~ 221 (302)
T 2e3d_A 160 DETGH-SQIMVEPV--ADVTAYGVVDCKGVELAPGESVPMVGVVEKPKADV---------------APSNLAIVGRYVLS 221 (302)
T ss_dssp HHHCC-EEEEEEEC--SCGGGSEEEECTTCCCCTTCEEEECEEEESCCTTT---------------CSCSEEEEEEEEEC
T ss_pred HhcCC-cEEEEEEc--cCCCCccEEEecccccCCCCceeEEEEEECCCCCc---------------cccceEEEEEEEEC
Confidence 88766 66665554 356789988764 456 8999999875211 13568999999999
Q ss_pred HHHHHHHHHhhCCC--CcccccccchhcccCCceEEEEEecceEEecCCHHHHHHHhHhhhccc
Q 044626 212 RDTMSRLLKEYLPE--ATDLGSEVIPAAISIGMKVEAYLFDGYWEDMRSIEAFYHANMECIKRS 273 (429)
Q Consensus 212 ~~~l~~~l~~~~~~--~~~~~~d~l~~l~~~g~~i~~~~~~~~~~~i~t~~~~~~an~~~l~~~ 273 (429)
+++|. .+++..++ ...+..++++.+++++ ++.+++++++|.||+||++|.++++.++...
T Consensus 222 ~~~l~-~l~~~~~~~~~~~~l~d~i~~l~~~~-~v~~~~~~~~~~DIgt~~d~~~a~~~~~~~~ 283 (302)
T 2e3d_A 222 ADIWP-LLAKTPPGAGDEIQLTDAIDMLIEKE-TVEAYHMKGKSHDCGNKLGYMQAFVEYGIRH 283 (302)
T ss_dssp TTHHH-HHTCCCC----CCCHHHHHHHHHHHS-CEEEEECCSCEEECSSHHHHHHHHHHHHHHC
T ss_pred HHHHH-HHHhhCCCCCCceehHHHHHHHHHhC-CEEEEEeCCeEEcCCCHHHHHHHHHHHHhcC
Confidence 99885 55543221 1223467888888776 8999999999999999999999997766433
No 12
>2pa4_A UTP-glucose-1-phosphate uridylyltransferase; phosphorylase, nucleotidyltransferase, metabolism; HET: GUD; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.98 E-value=1.2e-31 Score=257.87 Aligned_cols=247 Identities=16% Similarity=0.236 Sum_probs=188.2
Q ss_pred eEEEEEcCCCCCCcccccccccccccccCCcchhHHHHHHhhHhcCCCeEEEEeecChhHHHHHHhccccCccc------
Q 044626 2 VAAVVFGDGSESRLYPLTKRRSEGAIPLAANYRLVDAVVSNCINSNINKIYALTQFNSTSLNLHLSRAFSGILR------ 75 (429)
Q Consensus 2 m~avIla~G~gsRl~plt~~~pK~Llpi~g~~plI~~~i~~l~~~gi~~I~Iv~~~~~~~i~~~l~~~~~~~~~------ 75 (429)
|+|||||||.|+||+|+|..+||+|+|++|+ |||+|+++++..+|+++|+|+++++.+++.+++...+. |..
T Consensus 13 ~~aVIlAaG~gtRl~plt~~~pK~ll~i~gk-pli~~~l~~l~~~gi~~iivv~~~~~~~i~~~~~~~~~-~~~~l~~~~ 90 (323)
T 2pa4_A 13 KTVVVPAAGLGTRFLPATKTVPKELLPVVDT-PGIELIAAEAAELGATRLAIITAPNKAGVLAHFERSSE-LEETLMERG 90 (323)
T ss_dssp CEEEEECCCCCGGGTTGGGTSCGGGCEETTE-EHHHHHHHHHHHTTCCEEEEEECTTCHHHHHTTSCCHH-HHHHHHHTT
T ss_pred eEEEEECCCCccccCccccCCCceeeeECCE-EHHHHHHHHHHhCCCCEEEEEecCcHHHHHHHHhccch-hhhhhhccc
Confidence 7899999999999999999999999999999 99999999999999999999999988889988865321 100
Q ss_pred --------C-CCCcEEEEeccccccccCcccCcHHHHHHHHHHhhcCCCCeEEEEcCceeEe--ccHHHHHHHHHhcCCc
Q 044626 76 --------G-KDGFVEVIAAYQSLEDQDWFQGNADAIRRCLWVLEEYPVTEFLILPGHHLYK--MDYQRLIEAHRNNKAD 144 (429)
Q Consensus 76 --------~-~~~~v~i~~~~~~~~~~~~~~Gt~~al~~~~~~i~~~~~~~~lvl~gD~i~~--~~l~~~~~~~~~~~~~ 144 (429)
+ ....+++.+..+. ++.|++++++.+++++.+ ..+.|++++||++++ .++..++++|++.++
T Consensus 91 ~~~~~~~~~~~~~g~~i~~~~~~-----~~~Gt~~al~~a~~~l~~-~~d~~lv~~~D~~~~~~~~l~~l~~~~~~~~~- 163 (323)
T 2pa4_A 91 KTDQVEIIRRAADLIKAVPVTQD-----KPLGLGHAVGLAESVLDD-DEDVVAVMLPDDLVLPTGVMERMAQVRAEFGG- 163 (323)
T ss_dssp CHHHHHHTTHHHHHCEEEEEECS-----SCCCHHHHHHTTGGGSCS-SCCEEEEECTTEEEESSCHHHHHHHHHHTTCS-
T ss_pred hhhhhhhhhccccCcceEEEeCC-----ccCCcHHHHHHHHHHhcC-CCCeEEEEeCCcccCchHHHHHHHHHHHhcCC-
Confidence 0 0001123222221 247999999999887753 113499999999886 678999999987665
Q ss_pred eEEEEEeccCCCCCCccEEEEc----CCC--CEEEEEecCcccccccccCCCCCCCCCCCCCCcceeeEEEEcHHHHHHH
Q 044626 145 ITIVALNAIRDKHPGFGLLRVN----PVN--QVIEFSMKSERETITSISGKSSRKSDSVASGNFPSMGIYLINRDTMSRL 218 (429)
Q Consensus 145 ~ti~~~~~~~~~~~~~g~v~~d----~~~--~v~~~~ek~~~~~~~~~~~~~~~~~~~~~~~~~~~~Giy~~~~~~l~~~ 218 (429)
.++++.+.+.+++..||++.++ +++ +|..|.|||.... ..+++.++|+|+|++++|. .
T Consensus 164 ~~i~~~~~~~~~~~~yg~v~~d~~~~~~~~~~V~~~~Ekp~~~~---------------~~~~~~~~GiY~~~~~~~~-~ 227 (323)
T 2pa4_A 164 SVLCAVEVSEADVSKYGIFEIEADTKDSDVKKVKGMVEKPAIED---------------APSRLAATGRYLLDRKIFD-A 227 (323)
T ss_dssp EEEEEEECCGGGGGGSEEEEEEECCSSTTEEEEEEEEESCCTTT---------------CSCSEEEEEEEEEETHHHH-H
T ss_pred cEEEEEEecccccCCccEEEeCCcccCCCceeEEEEEECCCCcc---------------ccccEEEEEEEEECHHHHH-H
Confidence 4565555543456789998876 554 8999999974221 1356889999999999886 5
Q ss_pred HHhhCCCC-ccc-ccccchhcccCCceEEEEEecceEEecCCHHHHHHHhHhhhccc
Q 044626 219 LKEYLPEA-TDL-GSEVIPAAISIGMKVEAYLFDGYWEDMRSIEAFYHANMECIKRS 273 (429)
Q Consensus 219 l~~~~~~~-~~~-~~d~l~~l~~~g~~i~~~~~~~~~~~i~t~~~~~~an~~~l~~~ 273 (429)
+++..++. ..+ ..++++.++++|.++.+++++++|.||+||++|.++++.++...
T Consensus 228 l~~~~~~~~ge~~l~d~i~~l~~~g~~v~~~~~~g~w~DIgt~~dl~~a~~~~~~~~ 284 (323)
T 2pa4_A 228 LRRITPGAGGELQLTDAIDLLIDEGHPVHIVIHQGKRHDLGNPGGYIPACVDFGLSH 284 (323)
T ss_dssp HHHCCCCGGGCCCHHHHHHHHHHTTCCEEEEECCSEEEECSSHHHHHHHHHHHHHTC
T ss_pred HHhhCCCCCCeEeHHHHHHHHHHcCCCEEEEEeCCeEEeCCCHHHHHHHHHHHhhcC
Confidence 55432221 122 37889999887789999999999999999999999998877543
No 13
>1tzf_A Glucose-1-phosphate cytidylyltransferase; nucleotidyltransferase, mixed alpha/beta fold; HET: C5G; 2.10A {Salmonella enterica subsp} SCOP: c.68.1.13 PDB: 1wvc_A*
Probab=99.98 E-value=3e-31 Score=247.26 Aligned_cols=237 Identities=16% Similarity=0.233 Sum_probs=178.4
Q ss_pred CeEEEEEcCCCCCCcccccccccccccccCCcchhHHHHHHhhHhcCCCeEEEEeecChhHHHHHHhcccc---CcccCC
Q 044626 1 SVAAVVFGDGSESRLYPLTKRRSEGAIPLAANYRLVDAVVSNCINSNINKIYALTQFNSTSLNLHLSRAFS---GILRGK 77 (429)
Q Consensus 1 ~m~avIla~G~gsRl~plt~~~pK~Llpi~g~~plI~~~i~~l~~~gi~~I~Iv~~~~~~~i~~~l~~~~~---~~~~~~ 77 (429)
+|+|||||||.|+||+|+|..+||+|+|++|+ |||+|++++|.++|+++|+|+++++.+++.+++.+... .+....
T Consensus 2 ~~~avIlAaG~gtRl~~lt~~~pK~l~~i~gk-pli~~~l~~l~~~g~~~i~vv~~~~~~~i~~~~~~~~~~~~~~~~~~ 80 (259)
T 1tzf_A 2 ASKAVILAGGLGTRLSEETIVKPKPMVEIGGK-PILWHIMKMYSVHGIKDFIICCGYKGYVIKEYFANYFLHMSDVTFHM 80 (259)
T ss_dssp CCEEEEEECSCC--------CCCGGGCEETTE-EHHHHHHHHHHHTTCCEEEEEECTTHHHHHHHHHTHHHHHSCEEEEG
T ss_pred CcEEEEECCCCcccCCCccCCCCccccEECCE-EHHHHHHHHHHHCCCCEEEEEcccCHHHHHHHHhhcccccccccccc
Confidence 48999999999999999999999999999999 99999999999999999999999988889999976321 111000
Q ss_pred -CCcEEEE----------eccccccccCcccCcHHHHHHHHHHhhcCCCCeEEEEcCceeEeccHHHHHHHHHhcCCceE
Q 044626 78 -DGFVEVI----------AAYQSLEDQDWFQGNADAIRRCLWVLEEYPVTEFLILPGHHLYKMDYQRLIEAHRNNKADIT 146 (429)
Q Consensus 78 -~~~v~i~----------~~~~~~~~~~~~~Gt~~al~~~~~~i~~~~~~~~lvl~gD~i~~~~l~~~~~~~~~~~~~~t 146 (429)
...+++. ..++ +.+.|++++++.+++++.. .++|++++||.++..++.++++.|++.++.++
T Consensus 81 ~~~~~~~~~~~~~~~~v~~~~~-----~~~~gt~~al~~a~~~~~~--~~~~lv~~~D~~~~~~~~~~~~~~~~~~~~~t 153 (259)
T 1tzf_A 81 AENRMEVHHKRVEPWNVTLVDT-----GDSSMTGGRLKRVAEYVKD--DEAFLFTYGDGVADLDIKATIDFHKAHGKKAT 153 (259)
T ss_dssp GGTEEEETTCCCCCCEEEEEEC-----CSSCCHHHHHHHTGGGTTT--SSCEEEEETTEEECCCHHHHHHHHHHHCCSEE
T ss_pred cccceeeeeccccccceeeeec-----ccccCcHHHHHHHHHhcCC--CCcEEEEECCEecccCHHHHHHHHHHhCCeEE
Confidence 0001111 1111 1247999999999888742 37899999999988999999999988787777
Q ss_pred EEEEeccCCCCCCccEEEEcCCCCEEEEEecCcccccccccCCCCCCCCCCCCCCcceeeEEEEcHHHHHHHHHhhCCCC
Q 044626 147 IVALNAIRDKHPGFGLLRVNPVNQVIEFSMKSERETITSISGKSSRKSDSVASGNFPSMGIYLINRDTMSRLLKEYLPEA 226 (429)
Q Consensus 147 i~~~~~~~~~~~~~g~v~~d~~~~v~~~~ek~~~~~~~~~~~~~~~~~~~~~~~~~~~~Giy~~~~~~l~~~l~~~~~~~ 226 (429)
+.... .+..||++.++ +|+|..|.|||.. ..+++++|+|+|++++|+ .++. ..
T Consensus 154 ~~~~~----~~~~~g~v~~~-~g~v~~~~ekp~~------------------~~~~~~~Giy~~~~~~l~-~l~~---~~ 206 (259)
T 1tzf_A 154 LTATF----PPGRFGALDIQ-AGQVRSFQEKPKG------------------DGAMINGGFFVLNPSVID-LIDN---DA 206 (259)
T ss_dssp EEEEC----CCCCSEEEEEE-TTEEEEEEESCSC------------------CSCCEECCCEEECGGGGG-GCCS---TT
T ss_pred EEEec----CCCCccEEEEc-CCEEEEEEecCCC------------------CCceEEEEEEEeCHHHHH-hhcc---cc
Confidence 65322 46789988888 7899999998753 235789999999998874 3321 23
Q ss_pred cccccccchhcccCCceEEEEEecceEEecCCHHHHHHHhHhhhccc
Q 044626 227 TDLGSEVIPAAISIGMKVEAYLFDGYWEDMRSIEAFYHANMECIKRS 273 (429)
Q Consensus 227 ~~~~~d~l~~l~~~g~~i~~~~~~~~~~~i~t~~~~~~an~~~l~~~ 273 (429)
.++..++++.+++++ ++.+++++++|.||+|+++|.++++.+....
T Consensus 207 ~~~~~~~i~~~~~~~-~v~~~~~~~~~~dI~t~~d~~~a~~~~~~~~ 252 (259)
T 1tzf_A 207 TTWEQEPLMTLAQQG-ELMAFEHPGFWQPMDTLRDKVYLEGLWEKGK 252 (259)
T ss_dssp CCTTTHHHHHHHHTT-CEEEEEECSCEEECCSHHHHHHHHHHHHTTC
T ss_pred cccHHHHHHHHHHcC-CEEEEEeCcEEEeCCCHHHHHHHHHHHhcCC
Confidence 345577888888764 7999999999999999999999999888644
No 14
>4evw_A Nucleoside-diphosphate-sugar pyrophosphorylase; structural genomics, PSI-biology; HET: MSE; 1.90A {Vibrio cholerae}
Probab=99.98 E-value=9.4e-32 Score=249.66 Aligned_cols=228 Identities=11% Similarity=0.082 Sum_probs=173.2
Q ss_pred EEEEEcCCCCCCcccccccccccccccCCcchhHHHHHHhhHh-cCCCeEEEEeecChhHHHHHHhccccCcccCCCCcE
Q 044626 3 AAVVFGDGSESRLYPLTKRRSEGAIPLAANYRLVDAVVSNCIN-SNINKIYALTQFNSTSLNLHLSRAFSGILRGKDGFV 81 (429)
Q Consensus 3 ~avIla~G~gsRl~plt~~~pK~Llpi~g~~plI~~~i~~l~~-~gi~~I~Iv~~~~~~~i~~~l~~~~~~~~~~~~~~v 81 (429)
.+||||||.||||+|+|..+||+|+||+|+ |||+|+|++|.+ +|+++|++++++..+ +.+++.+....++.+ .+
T Consensus 1 ~~iIlAaG~GtRl~plt~~~PK~llpv~gk-pli~~~l~~l~~~~gi~~iivv~~~~~~-~~~~~~~~~~~~~~~---~~ 75 (255)
T 4evw_A 1 MIVIPMAGMSSRFFKAGYTQPKYMLEAHGQ-TLFEHSVNSFAAYFASTPFLFIVRNVYD-TAVFVREKATQLGIK---QF 75 (255)
T ss_dssp CEEEECCSCCHHHHHTTCCSCGGGCEETTE-EHHHHHHGGGGGGTTTSCEEEEEESSTT-HHHHHHHHHHHHTCS---SE
T ss_pred CEEEEcCCCCcccccCCCCCCccccEECCe-EHHHHHHHHHhccCCCceEEEEECchhh-hHHHHHHHHHHcCCC---Cc
Confidence 389999999999999999999999999999 999999999999 799999999998765 555554422112221 12
Q ss_pred EEEeccccccccCcccCcHHHHHHHHHHhhc---CCCCeEEEEcCceeE-eccHHHHHHHHHhcCCceEEEEEeccCCCC
Q 044626 82 EVIAAYQSLEDQDWFQGNADAIRRCLWVLEE---YPVTEFLILPGHHLY-KMDYQRLIEAHRNNKADITIVALNAIRDKH 157 (429)
Q Consensus 82 ~i~~~~~~~~~~~~~~Gt~~al~~~~~~i~~---~~~~~~lvl~gD~i~-~~~l~~~~~~~~~~~~~~ti~~~~~~~~~~ 157 (429)
.+... +. +++||+++++++++++.. ...++|+|++||+++ +.++..+ ..+++.++++.... ++
T Consensus 76 ~~~~~-~~-----~~~Gt~~av~~a~~~l~~~~~~~~~~~lV~~gD~l~~~~~~~~~-----~~~~~~~i~~~~~~--~p 142 (255)
T 4evw_A 76 YIAEL-HT-----ETRGQAETVTLGLEELAKQGVDYQGSITVFNIDTFRPNFVFPDI-----SQHSDGYLEVFQGG--GD 142 (255)
T ss_dssp EEEEE-SS-----CCSSHHHHHHHHHHHHHHTTCCCCSCEEECCTTEECTTCCCCGG-----GGSSSEEEEEEECC--SS
T ss_pred eEEEe-CC-----CCCCHHHHHHHHHHHHhhcccCCCCcEEEEeCCEEEecchhHHH-----hhcCCcEEEEEecC--CC
Confidence 22222 21 358999999999999831 123789999999988 5566443 24567778776654 34
Q ss_pred CCccEEEEcCCC--CEEEEEecCcccccccccCCCCCCCCCCCCCCcceeeEEEEcHH-HHHHHHHhh----CC---CCc
Q 044626 158 PGFGLLRVNPVN--QVIEFSMKSERETITSISGKSSRKSDSVASGNFPSMGIYLINRD-TMSRLLKEY----LP---EAT 227 (429)
Q Consensus 158 ~~~g~v~~d~~~--~v~~~~ek~~~~~~~~~~~~~~~~~~~~~~~~~~~~Giy~~~~~-~l~~~l~~~----~~---~~~ 227 (429)
.||++..|++| +|..|.||+. .++++++|+|+|++. .|.+.+.+. .+ ..+
T Consensus 143 -~yG~v~~d~~g~~~V~~i~EK~~-------------------~s~~~~~GiY~f~~~~~~~~~l~~~i~~~~~~~~~gE 202 (255)
T 4evw_A 143 -NWSFAKPEHAGSTKVIQTAEKNP-------------------ISDLCSTGLYHFNRKEDYLEAYREYVARPSQEWERGE 202 (255)
T ss_dssp -CSCEEEESSTTCCBEEEEESSSC-------------------SSSEEEEEEEEESCHHHHHHHHHHHHTSCGGGCSCSC
T ss_pred -ceeEEEECCCCCeEEEEEEeccC-------------------ccCcEEEeEEEECcHHHHHHHHHHHHhcccccccCCe
Confidence 89999998888 9999999943 357899999999975 343333321 11 234
Q ss_pred ccccccchhcccCCceEEEEEec-ceEEecCCHHHHHHHhHh
Q 044626 228 DLGSEVIPAAISIGMKVEAYLFD-GYWEDMRSIEAFYHANME 268 (429)
Q Consensus 228 ~~~~d~l~~l~~~g~~i~~~~~~-~~~~~i~t~~~~~~an~~ 268 (429)
.+.+|+++.++++|.++.++.++ ++|.|++||++|.++...
T Consensus 203 ~~ltd~i~~li~~g~~v~~~~~~~~~w~digt~~~l~~~~~~ 244 (255)
T 4evw_A 203 LYIAPLYNELIQKGLNIHYHLIARHEVIFCGVPDEYTDFLRQ 244 (255)
T ss_dssp CCSTTHHHHHHHTTCCEEEEECCGGGCEECCSHHHHHHHHHC
T ss_pred EehHHHHHHHHHCCCEEEEEEeccccEEECCCHHHHHHHHhc
Confidence 55689999999988899999985 999999999999988543
No 15
>3pnn_A Conserved domain protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics, MCSG; HET: MSE GOL; 1.90A {Porphyromonas gingivalis}
Probab=99.98 E-value=1.3e-31 Score=255.07 Aligned_cols=251 Identities=13% Similarity=0.126 Sum_probs=186.4
Q ss_pred CeEEEEEcCCCCCCccccccccccccccc--CCcchhHHHHHHhhHhcCCCeEEEEeecCh-hHHHHHHhccccCcccCC
Q 044626 1 SVAAVVFGDGSESRLYPLTKRRSEGAIPL--AANYRLVDAVVSNCINSNINKIYALTQFNS-TSLNLHLSRAFSGILRGK 77 (429)
Q Consensus 1 ~m~avIla~G~gsRl~plt~~~pK~Llpi--~g~~plI~~~i~~l~~~gi~~I~Iv~~~~~-~~i~~~l~~~~~~~~~~~ 77 (429)
+|+|||||||.|+||+| ||+|+|+ +|+ |||+|+++++.++|+++|+|++++.. +.+.+|+.+.+. ++.+
T Consensus 5 ~~~~vIlAaG~g~R~~~-----~K~l~~ig~~g~-pli~~~l~~~~~~~~~~i~vv~~~~~~~~~~~~~~~~~~-~~~~- 76 (303)
T 3pnn_A 5 KPTLFVLAAGMGSRYGS-----LKQLDGIGPGGD-TIMDYSVYDAIRAGFGRLVFVIRHSFEKEFREKILTKYE-GRIP- 76 (303)
T ss_dssp CCEEEEECTTCBCTTSS-----BCCCCCCSTTSC-CHHHHHHHHHHHHTCCEEEEEECGGGHHHHHHHTHHHHT-TTSC-
T ss_pred ceEEEEECCCCcccCCC-----CceEeEcCCCCe-eHHHHHHHHHHHCCCCeEEEEcCchHHHHHHHHHHHHhc-cCCc-
Confidence 46899999999999997 7999999 599 99999999999999999999999984 889999986544 3322
Q ss_pred CCcEEEEeccccc----------cccCcccCcHHHHHHHHHHhhcCCCCeEEEEcCceeEecc-HHHHHHHHHh---cCC
Q 044626 78 DGFVEVIAAYQSL----------EDQDWFQGNADAIRRCLWVLEEYPVTEFLILPGHHLYKMD-YQRLIEAHRN---NKA 143 (429)
Q Consensus 78 ~~~v~i~~~~~~~----------~~~~~~~Gt~~al~~~~~~i~~~~~~~~lvl~gD~i~~~~-l~~~~~~~~~---~~~ 143 (429)
+.+ ..+.. ....+++||++++++++++++ ++|+|++||++++.+ ++.++++|.+ .++
T Consensus 77 ---i~~--~~~~~~~~~~~~~~~~~~~~~~Gt~~al~~a~~~i~----~~~lV~~gD~l~~~~~~~~l~~~~~~~~~~~~ 147 (303)
T 3pnn_A 77 ---VEL--VFQELDRLPEGFSCPEGREKPWGTNHAVLMGRDAIR----EPFAVINADDFYGRNGFEVLARKLMTLEGKQG 147 (303)
T ss_dssp ---EEE--EECCTTCCCTTCCCCTTCCSCCCHHHHHHTTTTTCC----SCEEEEESSCBCCHHHHHHHHHHHHTTTTCSS
T ss_pred ---EEE--EecccccccccccccccccccCCcHHHHHHHHHhcC----CCEEEEECCeecCHHHHHHHHHHHHHhccccC
Confidence 222 22210 000135899999999998884 899999999988776 8999999986 567
Q ss_pred ceEEEEEeccCCCC-CCc-----cEEEEcCCCCEEEEEecCccccccc--ccCCCCCCCCCCCCCCcceeeEEEEcHHHH
Q 044626 144 DITIVALNAIRDKH-PGF-----GLLRVNPVNQVIEFSMKSERETITS--ISGKSSRKSDSVASGNFPSMGIYLINRDTM 215 (429)
Q Consensus 144 ~~ti~~~~~~~~~~-~~~-----g~v~~d~~~~v~~~~ek~~~~~~~~--~~~~~~~~~~~~~~~~~~~~Giy~~~~~~l 215 (429)
++++++.... ++ ..| |++.+|++|+|+.|.|||..+.... ...+..-.......+.++++|+|+|++++|
T Consensus 148 ~~~v~~~~~~--~~~~~~g~~~~G~v~~d~~g~v~~i~Ekp~~~~~~~~~~~~~~~g~~~~~~~~~~i~~GiY~f~~~~~ 225 (303)
T 3pnn_A 148 EYCMVGYRVG--NTLSESGGVSRGVCQVDEKHLLTGVVERTGIERTDGTISFRDETGKICTLAEDAPVSMNMWGFTPDYF 225 (303)
T ss_dssp EEEEEEEEGG--GSCBTTBCEEEEEEEECTTSBEEEEEEEEEEEEETTEEEEECTTSCEEEECTTCEEEEEEEEECTHHH
T ss_pred ceEEEEEECC--CccCccCceeeeeEeeCCCCcEEEEEECCCCccccccccccccccccccCCCCCEEEEEEEEECHHHH
Confidence 7888877664 34 555 5888888899999999986421000 000000000000136789999999999998
Q ss_pred HHHHHh--------hCC--CCcccccccchhcccCCc-eEEEEEecceEEecCCHHHHHHHhHhhhc
Q 044626 216 SRLLKE--------YLP--EATDLGSEVIPAAISIGM-KVEAYLFDGYWEDMRSIEAFYHANMECIK 271 (429)
Q Consensus 216 ~~~l~~--------~~~--~~~~~~~d~l~~l~~~g~-~i~~~~~~~~~~~i~t~~~~~~an~~~l~ 271 (429)
. .++. ... ..+.+..++++.++++|. ++.+|+++++|.+|+||++|.++++.+.+
T Consensus 226 ~-~l~~~~~~~l~~~~~~~~~e~~l~d~i~~li~~g~~~v~~~~~~g~w~dIgt~~dl~~a~~~l~~ 291 (303)
T 3pnn_A 226 D-YSEELFINFLNAHGQEPKSEFFIPFVVNDLIRSGRASVEVLDTTARWFGVTYSDDRPGVVAKLRE 291 (303)
T ss_dssp H-HHHHHHHHHHHHHTTCSSCCCCHHHHHHHHHHHTSCEEEEEECSCCCBCCSSGGGHHHHHHHHHH
T ss_pred H-HHHHHHHHHHHhcCCCcCCcEEhHHHHHHHHHcCCCcEEEEEeCCceECCCCHHHHHHHHHHHHH
Confidence 6 4432 111 223345789999998876 89999999999999999999999988765
No 16
>1fxo_A Glucose-1-phosphate thymidylyltransferase; rhamnose, nucleotidyltransferase, pyrophosphorylase, allostery; HET: TMP; 1.66A {Pseudomonas aeruginosa} SCOP: c.68.1.6 PDB: 1fzw_A 1g0r_A* 1g1l_A* 1g23_A* 1g2v_A* 1g3l_A* 1h5r_A* 1h5s_C* 1h5t_A* 1h5s_D* 1h5s_A* 1h5r_B* 1h5s_B* 1h5t_B* 1iim_A* 1iin_A* 3pkp_A* 3pkq_A* 1mp5_A* 1mp3_A* ...
Probab=99.97 E-value=1.1e-30 Score=247.21 Aligned_cols=233 Identities=16% Similarity=0.267 Sum_probs=184.3
Q ss_pred CeEEEEEcCCCCCCcccccccccccccccCCcchhHHHHHHhhHhcCCCeEEEEee-cChhHHHHHHhccccCcccCCCC
Q 044626 1 SVAAVVFGDGSESRLYPLTKRRSEGAIPLAANYRLVDAVVSNCINSNINKIYALTQ-FNSTSLNLHLSRAFSGILRGKDG 79 (429)
Q Consensus 1 ~m~avIla~G~gsRl~plt~~~pK~Llpi~g~~plI~~~i~~l~~~gi~~I~Iv~~-~~~~~i~~~l~~~~~~~~~~~~~ 79 (429)
+|+|||||||.|+||+|+|...||+|+|++|+ |||+|+++.|..+|+++|+|+++ ++.+.+.+++.+..+ |+.+
T Consensus 2 ~~~aIILAgG~gtRl~plT~~~pK~llpi~gk-pli~~~l~~l~~~gi~~I~vv~~~~~~~~i~~~l~~g~~-~g~~--- 76 (293)
T 1fxo_A 2 KRKGIILAGGSGTRLHPATLAISKQLLPVYDK-PMIYYPLSTLMLAGIREILIISTPQDTPRFQQLLGDGSN-WGLD--- 76 (293)
T ss_dssp CEEEEEECCCCCTTTTTHHHHSCGGGSEETTE-ETTHHHHHHHHHTTCCEEEEEECTTTHHHHHHHHTTSGG-GTCE---
T ss_pred CceEEEECCCCCCcCccccCCCCceeCeECCE-eHHHHHHHHHHHCCCCEEEEEeccccHHHHHHHHhcccc-cCce---
Confidence 57999999999999999999999999999999 99999999999999999998774 567788888876543 3432
Q ss_pred cEEEEeccccccccCcccCcHHHHHHHHHHhhcCCCCeEEEEcCceeE-eccHHHHHHHHHhcCCceEEEEEeccCCCCC
Q 044626 80 FVEVIAAYQSLEDQDWFQGNADAIRRCLWVLEEYPVTEFLILPGHHLY-KMDYQRLIEAHRNNKADITIVALNAIRDKHP 158 (429)
Q Consensus 80 ~v~i~~~~~~~~~~~~~~Gt~~al~~~~~~i~~~~~~~~lvl~gD~i~-~~~l~~~~~~~~~~~~~~ti~~~~~~~~~~~ 158 (429)
+.+..+. .+.|++++++.+++++.. +++++++||.++ ..++..+++.|.+.+..++++..+. .++.
T Consensus 77 ---i~~~~~~-----~~~G~~~al~~a~~~i~~---~~~~lv~gD~~~~~~~l~~~l~~~~~~~~~~~v~~~~v--~dp~ 143 (293)
T 1fxo_A 77 ---LQYAVQP-----SPDGLAQAFLIGESFIGN---DLSALVLGDNLYYGHDFHELLGSASQRQTGASVFAYHV--LDPE 143 (293)
T ss_dssp ---EEEEECS-----SCCCGGGHHHHTHHHHTT---SEEEEEETTEEEECTTHHHHHHHHHTCCSSEEEEEEEC--SCGG
T ss_pred ---EEEeeCC-----CCCCHHHHHHHHHHHhCC---CCEEEEECChhccCccHHHHHHHHHhcCCCcEEEEEEC--CCcc
Confidence 3333332 247999999999998863 788889999965 7789999999987677777766554 3577
Q ss_pred CccEEEEcCCCCEEEEEecCcccccccccCCCCCCCCCCCCCCcceeeEEEEcHHHHHHHHHhhCCC-Cccc-ccccchh
Q 044626 159 GFGLLRVNPVNQVIEFSMKSERETITSISGKSSRKSDSVASGNFPSMGIYLINRDTMSRLLKEYLPE-ATDL-GSEVIPA 236 (429)
Q Consensus 159 ~~g~v~~d~~~~v~~~~ek~~~~~~~~~~~~~~~~~~~~~~~~~~~~Giy~~~~~~l~~~l~~~~~~-~~~~-~~d~l~~ 236 (429)
.||++..|++|++..|.|||..+ .+++.++|+|+|++++|. .+++..++ ..++ .+|+++.
T Consensus 144 ~~g~v~~d~~g~v~~~~ekp~~~-----------------~s~~~~~Giy~~~~~~l~-~~~~~~~~~~ge~~~td~~~~ 205 (293)
T 1fxo_A 144 RYGVVEFDQGGKAISLEEKPLEP-----------------KSNYAVTGLYFYDQQVVD-IARDLKPSPRGELEITDVNRA 205 (293)
T ss_dssp GSEEEEECTTSCEEEEEESCSSC-----------------SSSEEEEEEEEECTTHHH-HHHHCCCCTTSSCCHHHHHHH
T ss_pred cCcEEEECCCCcEEEEEECCCCC-----------------CCCeEEEEEEEEcHHHHH-HHHhcCcccCCceeHHHHHHH
Confidence 89999999899999999997543 456899999999999986 55443221 1222 3678888
Q ss_pred cccCCceEEEEEec-c-eEEecCCHHHHHHHhHhhh
Q 044626 237 AISIGMKVEAYLFD-G-YWEDMRSIEAFYHANMECI 270 (429)
Q Consensus 237 l~~~g~~i~~~~~~-~-~~~~i~t~~~~~~an~~~l 270 (429)
+++.| ++.++... + .|.|++||++|.+++..+.
T Consensus 206 ~l~~g-~~~v~~~~~g~~w~Digt~edl~~a~~~~~ 240 (293)
T 1fxo_A 206 YLERG-QLSVEIMGRGYAWLDTGTHDSLLEAGQFIA 240 (293)
T ss_dssp HHHTT-CEEEEECCTTSEEEECCSHHHHHHHHHHHH
T ss_pred HHhcC-CeEEEEeCCCCEEEcCCCHHHHHHHHHHHH
Confidence 77764 56666664 6 4999999999999988765
No 17
>1lvw_A Glucose-1-phosphate thymidylyltransferase; protein nucleotide complex, nucleotide binding fold; HET: TYD; 1.70A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.68.1.6
Probab=99.97 E-value=1.5e-30 Score=246.45 Aligned_cols=233 Identities=17% Similarity=0.270 Sum_probs=183.4
Q ss_pred CeEEEEEcCCCCCCcccccccccccccccCCcchhHHHHHHhhHhcCCCeEEEEee-cChhHHHHHHhccccCcccCCCC
Q 044626 1 SVAAVVFGDGSESRLYPLTKRRSEGAIPLAANYRLVDAVVSNCINSNINKIYALTQ-FNSTSLNLHLSRAFSGILRGKDG 79 (429)
Q Consensus 1 ~m~avIla~G~gsRl~plt~~~pK~Llpi~g~~plI~~~i~~l~~~gi~~I~Iv~~-~~~~~i~~~l~~~~~~~~~~~~~ 79 (429)
.|+|||||||.||||+|+|...||+|+|++|+ |||+|+++.|..+|+++|+|+++ ++.+.+.+++.+..+ |+.+
T Consensus 3 ~m~aIILAgG~GtRl~plT~~~pK~llpi~gk-pli~~~l~~l~~~gi~~Iivv~~~~~~~~i~~~l~~g~~-~g~~--- 77 (295)
T 1lvw_A 3 HMKGIVLAGGSGTRLYPITRAVSKQLLPIYDK-PMIYYPLSVLMLAGIRDILIISTPRDLPLYRDLLGDGSQ-FGVR--- 77 (295)
T ss_dssp SCEEEEECCCCCSTTTTTTTSSCGGGSEETTE-ETTHHHHHHHHHTTCCEEEEEECTTTHHHHHHHHTTSGG-GTSE---
T ss_pred ceEEEEECCCCCCccccccCCCCceecEECCe-eHHHHHHHHHHHCCCCeEEEEeccchHHHHHHHhhhccc-cCce---
Confidence 48999999999999999999999999999999 99999999999999999999886 567788898876443 3432
Q ss_pred cEEEEeccccccccCcccCcHHHHHHHHHHhhcCCCCeEEEEcCceeE-eccHHHHHHHHHhcCCceEEEEEeccCCCCC
Q 044626 80 FVEVIAAYQSLEDQDWFQGNADAIRRCLWVLEEYPVTEFLILPGHHLY-KMDYQRLIEAHRNNKADITIVALNAIRDKHP 158 (429)
Q Consensus 80 ~v~i~~~~~~~~~~~~~~Gt~~al~~~~~~i~~~~~~~~lvl~gD~i~-~~~l~~~~~~~~~~~~~~ti~~~~~~~~~~~ 158 (429)
+.+..+. .+.|++++++.+++++.. ++++++.||.++ +.++.++++.|.+.+..++++..+.. ++.
T Consensus 78 ---i~~~~~~-----~~~G~~~al~~a~~~i~~---~~~~lv~gD~~~~~~~l~~~l~~~~~~~~~~~v~~~~v~--dp~ 144 (295)
T 1lvw_A 78 ---FSYRVQE-----EPRGIADAFIVGKDFIGD---SKVALVLGDNVFYGHRFSEILRRAASLEDGAVIFGYYVR--DPR 144 (295)
T ss_dssp ---EEEEECS-----SCCCGGGHHHHTHHHHTT---SCEEEEETTCCEECTTHHHHHHHHHTCCSSEEEEEEECS--CCT
T ss_pred ---EEEeeCC-----CCCChHHHHHHHHHHhCC---CcEEEEECCccccCcCHHHHHHHHHHcCCCcEEEEEECC--Ccc
Confidence 3222232 247999999999998863 778888899955 77899999999876677777665543 567
Q ss_pred CccEEEEcCCCCEEEEEecCcccccccccCCCCCCCCCCCCCCcceeeEEEEcHHHHHHHHHhhCCC-Cccc-ccccchh
Q 044626 159 GFGLLRVNPVNQVIEFSMKSERETITSISGKSSRKSDSVASGNFPSMGIYLINRDTMSRLLKEYLPE-ATDL-GSEVIPA 236 (429)
Q Consensus 159 ~~g~v~~d~~~~v~~~~ek~~~~~~~~~~~~~~~~~~~~~~~~~~~~Giy~~~~~~l~~~l~~~~~~-~~~~-~~d~l~~ 236 (429)
.||++..|+++++..|.|||..+ .+++.++|+|+|++++|+ .+++..++ ..++ .+|+++.
T Consensus 145 ~~g~v~~d~~g~v~~~~ekp~~~-----------------~s~~~~~Giy~f~~~~l~-~~~~~~~~~~ge~~~td~~~~ 206 (295)
T 1lvw_A 145 PFGVVEFDSEGRVISIEEKPSRP-----------------KSNYVVPGLYFYDNQVVE-IARRIEPSDRGELEITSVNEE 206 (295)
T ss_dssp TSEEEEECTTSBEEEEEESCSSC-----------------SCSEECCSEEEECTTHHH-HHHHCCCCTTSCCCHHHHHHH
T ss_pred cCCEEEECCCCcEEEEEECCCCC-----------------CCCEEEEEeEEEcHHHHH-HHHhcCCcccCceeHHHHHHH
Confidence 89999999899999999998543 456899999999999986 45443221 1222 3677777
Q ss_pred cccCCceEEEEEec-c-eEEecCCHHHHHHHhHhhh
Q 044626 237 AISIGMKVEAYLFD-G-YWEDMRSIEAFYHANMECI 270 (429)
Q Consensus 237 l~~~g~~i~~~~~~-~-~~~~i~t~~~~~~an~~~l 270 (429)
+++.| ++.++..+ + .|.|++|+++|.+++..+.
T Consensus 207 ~l~~g-~~~v~~~~~g~~w~Digt~edl~~a~~~~~ 241 (295)
T 1lvw_A 207 YLRMG-KLRVELMGRGMAWLDTGTHDGLLEASSFIE 241 (295)
T ss_dssp HHHTT-CEEEEEECTTCEECCCSSHHHHHHHHHHHH
T ss_pred HHHcC-CcEEEEeCCCCeEEeCCCHHHHHHHHHHHH
Confidence 77764 56666664 6 4999999999999988765
No 18
>1mc3_A Glucose-1-phosphate thymidylyltransferase; glucose-1-phosphate thymidylytransferase, RFFH; HET: TTP; 2.60A {Escherichia coli} SCOP: c.68.1.6
Probab=99.97 E-value=8.5e-31 Score=248.17 Aligned_cols=234 Identities=16% Similarity=0.233 Sum_probs=184.0
Q ss_pred CeEEEEEcCCCCCCcccccccccccccccCCcchhHHHHHHhhHhcCCCeEEEEee-cChhHHHHHHhccccCcccCCCC
Q 044626 1 SVAAVVFGDGSESRLYPLTKRRSEGAIPLAANYRLVDAVVSNCINSNINKIYALTQ-FNSTSLNLHLSRAFSGILRGKDG 79 (429)
Q Consensus 1 ~m~avIla~G~gsRl~plt~~~pK~Llpi~g~~plI~~~i~~l~~~gi~~I~Iv~~-~~~~~i~~~l~~~~~~~~~~~~~ 79 (429)
.|+|||||||.||||+|+|...||+|+|++|+ |||+|+++.|..+|+++|+|+++ ++.+.+.+++.+..+ |+.+
T Consensus 3 ~m~aIILAgG~GtRl~plT~~~pK~llpi~gk-pli~~~l~~l~~~gi~~I~vv~~~~~~~~i~~~l~~g~~-~g~~--- 77 (296)
T 1mc3_A 3 HMKGIILAGGSGTRLHPITRGVSKQLLPIYDK-PMIYYPLSVLMLAGIREILIITTPEDKGYFQRLLGDGSE-FGIQ--- 77 (296)
T ss_dssp CCEEEEECCCCCGGGHHHHTTSCGGGSEETTE-ETTHHHHHHHHHTTCCEEEEEECTTTHHHHHHHHTTSGG-GTCE---
T ss_pred ccEEEEECCCCCCcCCcccCCCCceeeEECCe-eHHHHHHHHHHhCCCCcEEEEechhHHHHHHHHHhcccc-cCce---
Confidence 48999999999999999999999999999999 99999999999999999999886 567788888876433 3332
Q ss_pred cEEEEeccccccccCcccCcHHHHHHHHHHhhcCCCCeEEEEcCceeE-eccHHHHHHHHHhcCCceEEEEEeccCCCCC
Q 044626 80 FVEVIAAYQSLEDQDWFQGNADAIRRCLWVLEEYPVTEFLILPGHHLY-KMDYQRLIEAHRNNKADITIVALNAIRDKHP 158 (429)
Q Consensus 80 ~v~i~~~~~~~~~~~~~~Gt~~al~~~~~~i~~~~~~~~lvl~gD~i~-~~~l~~~~~~~~~~~~~~ti~~~~~~~~~~~ 158 (429)
+.+..+. .+.|++++++.+++++.. ++++++.||.++ +.++..+++.|.+.+..++++..+. .++.
T Consensus 78 ---i~~~~~~-----~~~G~~~al~~a~~~i~~---~~~~lv~gD~~~~~~~l~~~l~~~~~~~~~~~v~~~~v--~dp~ 144 (296)
T 1mc3_A 78 ---LEYAEQP-----SPDGLAQAFIIGETFLNG---EPSCLVLGDNIFFGQGFSPKLRHVAARTEGATVFGYQV--MDPE 144 (296)
T ss_dssp ---EEEEECS-----SCCCSTHHHHHTHHHHTT---SCEEEEETTEEEECSSCHHHHHHHTTCCSSEEEEEEEC--SCCS
T ss_pred ---EEEeccC-----CCCCHHHHHHHHHHHhCC---CCEEEEECCccccccCHHHHHHHHHHcCCCCEEEEEEC--CCcc
Confidence 3222232 247999999999998863 678888899955 7789999999977666777766554 3577
Q ss_pred CccEEEEcCCCCEEEEEecCcccccccccCCCCCCCCCCCCCCcceeeEEEEcHHHHHHHHHhhCCC-Cccc-ccccchh
Q 044626 159 GFGLLRVNPVNQVIEFSMKSERETITSISGKSSRKSDSVASGNFPSMGIYLINRDTMSRLLKEYLPE-ATDL-GSEVIPA 236 (429)
Q Consensus 159 ~~g~v~~d~~~~v~~~~ek~~~~~~~~~~~~~~~~~~~~~~~~~~~~Giy~~~~~~l~~~l~~~~~~-~~~~-~~d~l~~ 236 (429)
.||++..|++|++..|.|||..+ .+++.++|+|+|++++++ .+++..++ ..++ .+++++.
T Consensus 145 ~yg~v~~d~~g~v~~~~ekp~~~-----------------~s~~~~~Giy~~~~~~l~-~~~~~~~~~~ge~~~td~~~~ 206 (296)
T 1mc3_A 145 RFGVVEFDDNFRAISLEEKPKQP-----------------KSNWAVTGLYFYDSKVVE-YAKQVKPSERGELEITSINQM 206 (296)
T ss_dssp SSBBCEEETTEEEEECCBSCSSC-----------------SCSEEEEEEEECCTHHHH-HHHSCCCCSSSSCCHHHHHHH
T ss_pred cCCEEEECCCCcEEEEEECCCCC-----------------CCCEEEEEEEEEcHHHHH-HHHhcCccccCCccHHHHHHH
Confidence 89999999899999999997544 456899999999999986 55543221 1222 3677777
Q ss_pred cccCCceEEEEEec-c-eEEecCCHHHHHHHhHhhhc
Q 044626 237 AISIGMKVEAYLFD-G-YWEDMRSIEAFYHANMECIK 271 (429)
Q Consensus 237 l~~~g~~i~~~~~~-~-~~~~i~t~~~~~~an~~~l~ 271 (429)
++++| ++.++..+ + .|.|++|+++|.+++..+..
T Consensus 207 ~l~~g-~~~v~~~~~g~~w~Digt~edl~~a~~~~~~ 242 (296)
T 1mc3_A 207 YLEAG-NLTVELLGRGFAWLDTGTHDSLIEASTFVQT 242 (296)
T ss_dssp HHHTT-CEEEEECCTTCEEEECCSHHHHHHHHHHHHH
T ss_pred HHhcC-CeEEEEeCCCCEEEeCCCHHHHHHHHHHHHH
Confidence 77764 56677665 6 49999999999999987653
No 19
>2qh5_A PMI, ALGA, mannose-6-phosphate isomerase; structural genomics, PSI, protein structure initi nysgrc; 2.30A {Helicobacter pylori}
Probab=99.96 E-value=2.4e-29 Score=240.24 Aligned_cols=241 Identities=14% Similarity=0.246 Sum_probs=153.4
Q ss_pred CeEEEEEcCCCCCCcccccc-ccccccccc-CCcchhHHHHHHhhHhcCCCeEEEEeecCh-hHHHHHHhccccCcccCC
Q 044626 1 SVAAVVFGDGSESRLYPLTK-RRSEGAIPL-AANYRLVDAVVSNCINSNINKIYALTQFNS-TSLNLHLSRAFSGILRGK 77 (429)
Q Consensus 1 ~m~avIla~G~gsRl~plt~-~~pK~Llpi-~g~~plI~~~i~~l~~~gi~~I~Iv~~~~~-~~i~~~l~~~~~~~~~~~ 77 (429)
+|+|||||||.|+||+|+|. ..||+|+|+ +|+ |||+|++++|.++ +++|+|+++++. +.+.+++.+. |+..
T Consensus 4 ~~~avIlAgG~gtRl~plt~~~~pK~ll~i~gg~-pli~~~l~~l~~~-~~~i~vv~~~~~~~~i~~~~~~~---~~~~- 77 (308)
T 2qh5_A 4 KIKNILLSGGSGKRLWPLSRSLYPKQFLKLFDHK-SLFELSFKRNASL-VDETLIVCNEKHYFLALEEIKNE---IKNK- 77 (308)
T ss_dssp CEEEEEECC-------------CCGGGCTTBTTB-CHHHHHHHHHHTT-CSEEEEEEEGGGHHHHHHHTTTT---CSSC-
T ss_pred ccEEEEEcCCCCccCCccCCCCCCCEEEECCCCC-CHHHHHHHHHHcc-CCCEEEEEChhHHHHHHHHHHHh---hCCC-
Confidence 58899999999999999996 799999999 598 9999999999999 999999999874 5778888653 2221
Q ss_pred CCcEEEEeccccccccCcccCcHHHHHHHHHHhhcCCCCeEEEEcCceeE-ecc-HHHHHHH---HHhcCCceEEEEEec
Q 044626 78 DGFVEVIAAYQSLEDQDWFQGNADAIRRCLWVLEEYPVTEFLILPGHHLY-KMD-YQRLIEA---HRNNKADITIVALNA 152 (429)
Q Consensus 78 ~~~v~i~~~~~~~~~~~~~~Gt~~al~~~~~~i~~~~~~~~lvl~gD~i~-~~~-l~~~~~~---~~~~~~~~ti~~~~~ 152 (429)
.+.++ .+. ++.||+++++.+++.+.. .+.|++++||+++ +.+ |.++++. |.+.++.+|+.+.+.
T Consensus 78 --~~~~i--~~~-----~~~gt~~al~~a~~~l~~--~~~~lv~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~ 146 (308)
T 2qh5_A 78 --SVGFL--LES-----LSKNTANAIALSALMSDK--EDLLIVTPSDHLIKDLQAYENAIKKAIDLAQKGFLVTFGVSID 146 (308)
T ss_dssp --EEEEE--EES-----SCCCHHHHHHHHHHTSCT--TSEEEEEESSCBCCCHHHHHHHHHHHHHHHHTTCEEEEEEECS
T ss_pred --ccEEE--eCC-----CCCChHHHHHHHHHHhCC--CCeEEEEcCCccccCHHHHHHHHHHHHHHHhcCCEEEEEEecC
Confidence 12222 221 247999999999988741 2569999999987 666 8899887 666667777776554
Q ss_pred cCCCCCCccEEEEcCCCCEEEEEecCcccccccccCCCCCCCCCCCCCCcceeeEEEEcHHHHHHHHHhhCCC-------
Q 044626 153 IRDKHPGFGLLRVNPVNQVIEFSMKSERETITSISGKSSRKSDSVASGNFPSMGIYLINRDTMSRLLKEYLPE------- 225 (429)
Q Consensus 153 ~~~~~~~~g~v~~d~~~~v~~~~ek~~~~~~~~~~~~~~~~~~~~~~~~~~~~Giy~~~~~~l~~~l~~~~~~------- 225 (429)
..+..||++..+++++|..|.|||......... ...++++++|+|+|+++.|.+.++...+.
T Consensus 147 --~~~~~~g~i~~d~~~~V~~~~Ekp~~~~~~~~~---------~~g~~~~n~Giy~~~~~~ll~~l~~~~p~~~~~~~~ 215 (308)
T 2qh5_A 147 --KPNTEFGYIESPNGLDVKRFIEKPSLDKAIEFQ---------KSGGFYFNSGMFVFQAGVFLDELKKHAPTILKGCER 215 (308)
T ss_dssp --SCCTTSEEEECSSSSBCSEEEESCCHHHHHHHH---------HHCCEEEEEEEEEEEHHHHHHHHHHHCHHHHHHHHH
T ss_pred --CCCCCceEEEECCCCEEEEEEECCChHHHHHHh---------hcCCeEEEeEEEEEEHHHHHHHHHHhChHHHHHHHH
Confidence 245679999887778999999998643100000 00246899999999998864455432111
Q ss_pred -----C------cccc---cccch--------h-cccCCceEEEEEecceEEecCCHHHHHHHhHhh
Q 044626 226 -----A------TDLG---SEVIP--------A-AISIGMKVEAYLFDGYWEDMRSIEAFYHANMEC 269 (429)
Q Consensus 226 -----~------~~~~---~d~l~--------~-l~~~g~~i~~~~~~~~~~~i~t~~~~~~an~~~ 269 (429)
. ..+. .++++ . +++++.++.+++++++|.|++||++|.+++..-
T Consensus 216 ~~~~~~~~~~~e~~~~~~~~~~~~~~~~~sid~~lle~~~~v~~~~~~~~w~digt~~~l~~~~~~~ 282 (308)
T 2qh5_A 216 AFESLENAYFFEKKIARLSEKSMQDLEDMSIDIALMQQSHKIKMVELNAKWSDLGNFNALFEEAANE 282 (308)
T ss_dssp HGGGCEEECCSSSCEEEECHHHHHTSCCCCHHHHTTTTCSCEEEEECCSCCBC--------------
T ss_pred HhhccccccccchhhhhhhHHHHhhCcccceeHHHhcCCCcEEEEECCCceeCCCCHHHHHHHhhcC
Confidence 0 1111 23333 2 566678899999999999999999999997654
No 20
>2x65_A Mannose-1-phosphate guanylyltransferase; nucleotidyltransferase; HET: M1P; 2.10A {Thermotoga maritima} PDB: 2x5z_A* 2x60_A* 2x5s_A*
Probab=99.95 E-value=1.9e-27 Score=229.03 Aligned_cols=234 Identities=15% Similarity=0.206 Sum_probs=168.4
Q ss_pred eEEEEEcCCCCCCccccc-ccccccccccCC-cchhHHHHHHhhHhc-CCCeEEEEeecC-hhHHHHHHhccccCcccCC
Q 044626 2 VAAVVFGDGSESRLYPLT-KRRSEGAIPLAA-NYRLVDAVVSNCINS-NINKIYALTQFN-STSLNLHLSRAFSGILRGK 77 (429)
Q Consensus 2 m~avIla~G~gsRl~plt-~~~pK~Llpi~g-~~plI~~~i~~l~~~-gi~~I~Iv~~~~-~~~i~~~l~~~~~~~~~~~ 77 (429)
|++||||||.||||+||| ..+||+|+|++| + |||+|++++|... |+++|+|+++++ .+.+.+++.+... +
T Consensus 2 m~~VILAgG~GtRl~Pls~~~~pK~ll~l~g~~-pli~~~l~~l~~~~~~~~iivvt~~~~~~~i~~~l~~~~~-~---- 75 (336)
T 2x65_A 2 MKALILAGGSGERFWPLSTPETPKQFLKLFGNK-SLMRWTFERVLEEMDPKDVIVVTHKDYVERTKKELPELPD-E---- 75 (336)
T ss_dssp CEEEEECCCBCGGGTTTSCTTCBGGGCCCBTTB-CHHHHHHHHHHTTCCGGGEEEEEEGGGHHHHHHHCTTSCG-G----
T ss_pred eEEEEECCCCCccCCCCcCCCCCceEEECCCCC-cHHHHHHHHHhccCCCCcEEEEcChHHHHHHHHHhhcccc-c----
Confidence 789999999999999999 679999999999 8 9999999999997 899999999986 4567777765311 1
Q ss_pred CCcEEEEeccccccccCcccCcHHHHHHHHHHhhcCCCCeEEEEcCceeEec--cHH----HHHHHHHhcCCceEEEEEe
Q 044626 78 DGFVEVIAAYQSLEDQDWFQGNADAIRRCLWVLEEYPVTEFLILPGHHLYKM--DYQ----RLIEAHRNNKADITIVALN 151 (429)
Q Consensus 78 ~~~v~i~~~~~~~~~~~~~~Gt~~al~~~~~~i~~~~~~~~lvl~gD~i~~~--~l~----~~~~~~~~~~~~~ti~~~~ 151 (429)
. ++. ++ ++.||+.++..+...+. ..+.+++++||+++.. +|. .++++|++.++.+|+.+.+
T Consensus 76 --~--ii~--e~-----~~~gta~ai~~a~~~~~--~~~~~lvl~~D~~~~~~~~~~~~l~~~~~~~~~~~~~vt~~i~p 142 (336)
T 2x65_A 76 --N--IIA--EP-----MKKNTAPACFIGTKLAD--DDEPVLVLPADHRIPDTKKFWKTVKKALDALEKYDGLFTFGIVP 142 (336)
T ss_dssp --G--EEE--ES-----SCCCHHHHHHHHHTTSC--TTCEEEEEETTCBCCCHHHHHHHHHHHHHHHHHHCSEEEEEECC
T ss_pred --e--EEe--CC-----CCCCcHHHHHHHHHhhC--CCCEEEEEcCCceeccHHHHHHHHHHHHHHHHhcCCeEEEEeec
Confidence 1 211 11 24799999998876542 2367999999997732 444 4445566656666665544
Q ss_pred ccCCCCCCccEEEEcCC-----CCEEEEEecCcccccccccCCCCCCCCCCCCCCcceeeEEEEcHHHHHHHHHhhCCC-
Q 044626 152 AIRDKHPGFGLLRVNPV-----NQVIEFSMKSERETITSISGKSSRKSDSVASGNFPSMGIYLINRDTMSRLLKEYLPE- 225 (429)
Q Consensus 152 ~~~~~~~~~g~v~~d~~-----~~v~~~~ek~~~~~~~~~~~~~~~~~~~~~~~~~~~~Giy~~~~~~l~~~l~~~~~~- 225 (429)
.. ....||++..+++ ++|..|.|||..+..... .....+++++|+|+|+++.|.+.++...+.
T Consensus 143 ~~--~~~~yG~I~~~~~~~~~~~~V~~f~EKp~~~~a~~~---------~~~g~y~~n~Giy~~~~~~ll~~l~~~~p~~ 211 (336)
T 2x65_A 143 TR--PETGYGYIEIGEELEEGVHKVAQFREKPDLETAKKF---------VESGRFLWNSGMFLWKAREFIEEVKVCEPSI 211 (336)
T ss_dssp CS--CCSSSEEEEEEEEEETTEEEEEEEEESCCHHHHHHH---------HHHTCEEEEEEEEEEEHHHHHHHHHHHCHHH
T ss_pred cc--CCCCceEEEECCccCCCccEEEEEEECCChHHHHHH---------HhcCCeEEEeeeEEEEHHHHHHHHHHHCHHH
Confidence 32 2368999987654 789999999875421000 000246889999999999875455443211
Q ss_pred ----------Ccccccccchh---------cccCCceEEEEEecceEEecCCHHHHHHH
Q 044626 226 ----------ATDLGSEVIPA---------AISIGMKVEAYLFDGYWEDMRSIEAFYHA 265 (429)
Q Consensus 226 ----------~~~~~~d~l~~---------l~~~g~~i~~~~~~~~~~~i~t~~~~~~a 265 (429)
..+|..++++. +++++.++.+++++++|.|++|+++|+++
T Consensus 212 ~~~~~~~~~~~e~~~~~~~~~~~~~sidy~vme~~~~v~v~~~~~~W~DiGt~~~l~~~ 270 (336)
T 2x65_A 212 YENLKDVDPRNFEELKKAYEKVPSISVDYAVMEKSKKVRVVKADFEWSDLGNWSSVREI 270 (336)
T ss_dssp HHHHTTCCTTCHHHHHHHHHHSCCCCHHHHTTTTCSCEEEEECSSCCBCCCSHHHHHHH
T ss_pred HHHHHHhhhhhhhHHHHHHHhCccccHHHHHhcCCCeEEEEEecCCCcCCCCHHHHHhh
Confidence 00233455554 45556789999999999999999999998
No 21
>1jyk_A LICC protein, CTP:phosphocholine cytidylytransferase; 3D structure, CTP:phosphocholine cytidylyltransferase; 1.50A {Streptococcus pneumoniae} SCOP: c.68.1.13 PDB: 1jyl_A*
Probab=99.94 E-value=5e-27 Score=217.90 Aligned_cols=219 Identities=11% Similarity=0.113 Sum_probs=157.3
Q ss_pred CeEEEEEcCCCCCCcccccccccccccccCCcchhHHHHHHhhHhcCCCeEEEEeecChhHHHHHHhccccCcccCCCCc
Q 044626 1 SVAAVVFGDGSESRLYPLTKRRSEGAIPLAANYRLVDAVVSNCINSNINKIYALTQFNSTSLNLHLSRAFSGILRGKDGF 80 (429)
Q Consensus 1 ~m~avIla~G~gsRl~plt~~~pK~Llpi~g~~plI~~~i~~l~~~gi~~I~Iv~~~~~~~i~~~l~~~~~~~~~~~~~~ 80 (429)
+|+|||||||.|+||+|+|..+||+|+|++|+ |||+|++++|.++|+++|+|++++..+++.+.+.. ++
T Consensus 25 ~~~aiIlAaG~gtRl~plt~~~pK~l~~i~gk-pli~~~l~~l~~~g~~~i~vv~~~~~~~i~~~~~~----~~------ 93 (254)
T 1jyk_A 25 RVKAIILAAGLGTRLRPLTENTPKALVQVNQK-PLIEYQIEFLKEKGINDIIIIVGYLKEQFDYLKEK----YG------ 93 (254)
T ss_dssp CCEEEEEECSCCGGGTTTTSSSCGGGCEETTE-EHHHHHHHHHHHTTCCCEEEEECTTGGGGTHHHHH----HC------
T ss_pred CceEEEECCCCcccCCcccCCCCCEEeeECCE-EHHHHHHHHHHHCCCCeEEEEeCCcHHHHHHHHHh----CC------
Confidence 47899999999999999999999999999999 99999999999999999999999877766544432 22
Q ss_pred EEEEeccccccccCcccCcHHHHHHHHHHhhcCCCCeEEEEcCceeEeccH-HHHHHHHHhcCCceEEEEEeccCCCC-C
Q 044626 81 VEVIAAYQSLEDQDWFQGNADAIRRCLWVLEEYPVTEFLILPGHHLYKMDY-QRLIEAHRNNKADITIVALNAIRDKH-P 158 (429)
Q Consensus 81 v~i~~~~~~~~~~~~~~Gt~~al~~~~~~i~~~~~~~~lvl~gD~i~~~~l-~~~~~~~~~~~~~~ti~~~~~~~~~~-~ 158 (429)
+.++...+. . ..|++++++.+++.++ ++++++||+++..++ ..++ +.++.+++ ... ++ .
T Consensus 94 ~~iv~~~~~--~---~~g~~~al~~a~~~~~-----~~lv~~~D~~~~~~~~~~~~----~~~~~~t~---~~~--~~~~ 154 (254)
T 1jyk_A 94 VRLVFNDKY--A---DYNNFYSLYLVKEELA-----NSYVIDADNYLFKNMFRNDL----TRSTYFSV---YRE--DCTN 154 (254)
T ss_dssp CEEEECTTT--T---TSCTHHHHHTTGGGCT-----TEEEEETTEEESSCCCCSCC----CSEEEEEC---EES--SCSS
T ss_pred cEEEECCCc--c---CCCcHHHHHHHHHHCC-----CEEEEeCCcccCHHHHHHHH----hCCceEEE---Ecc--cCCC
Confidence 223322211 1 3699999998876663 488999999874443 3222 22222222 111 23 3
Q ss_pred CccEEEEcCCCCEEEEEecCcccccccccCCCCCCCCCCCCCCcceeeEEEEcHHHH---HHHHHhhCCC---Ccccccc
Q 044626 159 GFGLLRVNPVNQVIEFSMKSERETITSISGKSSRKSDSVASGNFPSMGIYLINRDTM---SRLLKEYLPE---ATDLGSE 232 (429)
Q Consensus 159 ~~g~v~~d~~~~v~~~~ek~~~~~~~~~~~~~~~~~~~~~~~~~~~~Giy~~~~~~l---~~~l~~~~~~---~~~~~~d 232 (429)
.|+++ +|++|+|..+.|++. ..++++|+|+|+++.+ .+++++.... .+.+..+
T Consensus 155 ~~~v~-~d~~g~v~~~~e~~~--------------------~~~~~~Giy~~~~~~~~~l~~~l~~~~~~~~~~e~~~~d 213 (254)
T 1jyk_A 155 EWFLV-YGDDYKVQDIIVDSK--------------------AGRILSGVSFWDAPTAEKIVSFIDKAYVSGEFVDLYWDN 213 (254)
T ss_dssp CCEEE-ECTTCBEEEEECCCS--------------------SEEBCCSEEEECHHHHHHHHHHHHHHHTTTCCTTCCTTH
T ss_pred CeEEE-ECCCCeEEEEEECCC--------------------CCcEEEEEEEEcHHHHHHHHHHHHHHHhcCCccccCHHH
Confidence 57754 788899999999642 3478999999998744 3344432221 2334567
Q ss_pred cchhcccCCceEEEEEec-ceEEecCCHHHHHHHhHhhhc
Q 044626 233 VIPAAISIGMKVEAYLFD-GYWEDMRSIEAFYHANMECIK 271 (429)
Q Consensus 233 ~l~~l~~~g~~i~~~~~~-~~~~~i~t~~~~~~an~~~l~ 271 (429)
+++.+.+ +.++.++.++ ++|.+|+|+++|.++++.+.+
T Consensus 214 ~~~~l~~-~~~v~~~~~~~~~~~~Idt~edl~~a~~~l~~ 252 (254)
T 1jyk_A 214 MVKDNIK-ELDVYVEELEGNSIYEIDSVQDYRKLEEILKN 252 (254)
T ss_dssp HHHTTGG-GCCEEEEECCTTSEEECCSHHHHHHHHHHHC-
T ss_pred HHHHHHh-hCCeEEEEecCCeEEEcCCHHHHHHHHHHhhh
Confidence 7777655 4789999887 799999999999999887653
No 22
>3oam_A 3-deoxy-manno-octulosonate cytidylyltransferase; center for structural genomics of infectious diseases; 1.75A {Vibrio cholerae o1 biovar el tor} SCOP: c.68.1.13
Probab=99.94 E-value=3.9e-26 Score=211.64 Aligned_cols=238 Identities=11% Similarity=0.089 Sum_probs=171.7
Q ss_pred CeEEEEEcCCCCCCcccccccccccccccCCcchhHHHHHHhhHhcCCCeEEEEeecChhHHHHHHhccccCcccCCCCc
Q 044626 1 SVAAVVFGDGSESRLYPLTKRRSEGAIPLAANYRLVDAVVSNCINSNINKIYALTQFNSTSLNLHLSRAFSGILRGKDGF 80 (429)
Q Consensus 1 ~m~avIla~G~gsRl~plt~~~pK~Llpi~g~~plI~~~i~~l~~~gi~~I~Iv~~~~~~~i~~~l~~~~~~~~~~~~~~ 80 (429)
|+.|||||||.||||. ||+|+|++|+ |||+|+++.|..+|+++|+|+++ .+.+.+++.+ ++.
T Consensus 2 ~~~aiIlA~G~stRlp------~K~L~~i~Gk-Pli~~~l~~l~~~~~~~ivVv~~--~~~i~~~~~~----~g~----- 63 (252)
T 3oam_A 2 SFTVVIPARYQSTRLP------GKPLADIGGK-PMIQWVYEQAMQAGADRVIIATD--DERVEQAVQA----FGG----- 63 (252)
T ss_dssp CEEEEEECCCCCSSST------TGGGCEETTE-EHHHHHHHHHHHTTCSEEEEEES--CHHHHHHHHH----TTC-----
T ss_pred ceEEEEecCcCCCCCC------CcceeeECCE-EHHHHHHHHHHhCCCCeEEEECC--HHHHHHHHHH----cCC-----
Confidence 5689999999999994 8999999999 99999999999999999999885 4778888865 232
Q ss_pred EEEEeccccccccCcccCcHHHHHHHHHHhhcCCCCeEEEEcCce-eE-eccHHHHHHHHHhcCCceEEEEEeccCCCCC
Q 044626 81 VEVIAAYQSLEDQDWFQGNADAIRRCLWVLEEYPVTEFLILPGHH-LY-KMDYQRLIEAHRNNKADITIVALNAIRDKHP 158 (429)
Q Consensus 81 v~i~~~~~~~~~~~~~~Gt~~al~~~~~~i~~~~~~~~lvl~gD~-i~-~~~l~~~~~~~~~~~~~~ti~~~~~~~~~~~ 158 (429)
++.+..++ ++.||++ +..+.+.+.....+.|++++||. +. ...+..+++.|.+.++++++++.+.. ++.
T Consensus 64 -~v~~~~~~-----~~~Gt~~-~~~~~~~l~~~~~d~vlv~~gD~Pli~~~~i~~l~~~~~~~~~~~~~~~~~v~--~~~ 134 (252)
T 3oam_A 64 -VVCMTSPN-----HQSGTER-LAEVVAKMAIPADHIVVNVQGDEPLIPPAIIRQVADNLAACSAPMATLAVEIE--DEA 134 (252)
T ss_dssp -EEEECCTT-----CCSHHHH-HHHHHHHTTCCTTSEEEECCTTCTTCCHHHHHHHHHHHHHSSCSEEEEEEEEC--CHH
T ss_pred -EEEEcCCC-----CCCcHHH-HHHHHHhcCcCCCCEEEEEeCCeeecCHHHHHHHHHHHHhcCCCEEEEeeecC--CHH
Confidence 24332221 2479877 55666666311248999999998 44 67789999999888888888877764 334
Q ss_pred Cc-----cEEEEcCCCCEEEEEecCcccccccccCCCCCC-CCCCCCCCcceeeEEEEcHHHHHHHHHhhCCCCcccccc
Q 044626 159 GF-----GLLRVNPVNQVIEFSMKSERETITSISGKSSRK-SDSVASGNFPSMGIYLINRDTMSRLLKEYLPEATDLGSE 232 (429)
Q Consensus 159 ~~-----g~v~~d~~~~v~~~~ek~~~~~~~~~~~~~~~~-~~~~~~~~~~~~Giy~~~~~~l~~~l~~~~~~~~~~~~d 232 (429)
.| |.+..|++|+++.|.++|..... +.+.. ......+++.++|+|.|++++|+++.+.. ++..+. .+
T Consensus 135 ~~~~p~~g~vv~d~~g~v~~fsr~~i~~~~-----~~~~~~~~~~~~~~~~n~GiY~~~~~~l~~~~~~~-~~~~e~-~E 207 (252)
T 3oam_A 135 EVFNPNAVKVITDKSGYALYFSRATIPWDR-----DNFAKADKAIVQPLLRHIGIYAYRAGFINTYLDWQ-PSQLEK-IE 207 (252)
T ss_dssp HHTCTTSCEEEECTTSBEEEEESSCSSCCH-----HHHHSSSCCCCSCEEEEEEEEEEETTHHHHHHHSC-CCHHHH-HH
T ss_pred HhhCCCceEEEECCCCeEEEEeCCCCCCCC-----CccccccccccccceEEEEEEEcCHHHHHHHHcCC-CCcccc-cc
Confidence 44 88999999999999998753210 00000 00001357899999999999998655432 222222 12
Q ss_pred cchhc--ccCCceEEEEEe-cceEEecCCHHHHHHHhHhhhcc
Q 044626 233 VIPAA--ISIGMKVEAYLF-DGYWEDMRSIEAFYHANMECIKR 272 (429)
Q Consensus 233 ~l~~l--~~~g~~i~~~~~-~~~~~~i~t~~~~~~an~~~l~~ 272 (429)
.+.+| +++|.++.++.. +..|.+|+||+||.++++.+.++
T Consensus 208 ~le~lr~l~~G~~i~~~~~~~~~~~~idt~~dl~~a~~~~~~r 250 (252)
T 3oam_A 208 CLEQLRVLWHGEKIHVAVALEAPPAGVDTPEDLEVVRRIVAER 250 (252)
T ss_dssp TCTTHHHHHTTCCEEEEECSSCCCCCCCSHHHHHHHHHHHHHT
T ss_pred hhHHHHHHHCCCeEEEEEecCCCCCCCCCHHHHHHHHHHHHhh
Confidence 33333 456889999866 45789999999999999887654
No 23
>2cu2_A Putative mannose-1-phosphate guanylyl transferase; mannose-1-phosphate geranyltransferase, thermus thermophilus structural genomics; 2.20A {Thermus thermophilus} SCOP: b.81.4.1 c.68.1.20
Probab=99.94 E-value=1.1e-26 Score=223.90 Aligned_cols=232 Identities=17% Similarity=0.210 Sum_probs=162.9
Q ss_pred CeEEEEEcCCCCCCccccc-ccccccccccCC-cchhHHHHHHhhHhc-CCCeEEEEeecCh-hHHHHHHhccccCcccC
Q 044626 1 SVAAVVFGDGSESRLYPLT-KRRSEGAIPLAA-NYRLVDAVVSNCINS-NINKIYALTQFNS-TSLNLHLSRAFSGILRG 76 (429)
Q Consensus 1 ~m~avIla~G~gsRl~plt-~~~pK~Llpi~g-~~plI~~~i~~l~~~-gi~~I~Iv~~~~~-~~i~~~l~~~~~~~~~~ 76 (429)
+|.+||||||.|+||+||| ..+||+|+|++| + |||+|+++++..+ |+++++|+++++. +.+.+++.+.
T Consensus 2 ~m~~VILAgG~GtRl~Pls~~~~pK~ll~l~G~~-pli~~~l~~l~~~~~~~~iiVvt~~~~~~~i~~~l~~~------- 73 (337)
T 2cu2_A 2 KTYALVMAGGRGERLWPLSREDRPKPFLPLFEGK-TLLEATLERLAPLVPPERTLLAVRRDQEAVARPYADGI------- 73 (337)
T ss_dssp CEEEEEECCCCCGGGTTTCBTTBCGGGCBCGGGC-BHHHHHHHHHTTTSCGGGEEEEEEGGGHHHHGGGCSSS-------
T ss_pred CeEEEEEcCCCcccCCccCCCCCCceEEEcCCCC-hHHHHHHHHHhCcCCCCCEEEEcChHHHHHHHHHhccC-------
Confidence 4789999999999999999 589999999999 8 9999999999988 8999999998863 4455554321
Q ss_pred CCCcEEEEeccccccccCcccCcHHHHHHHHHHhhcC-CCCeEEEEcCceeEe--ccHHHHHH----HHHhcCCceEEEE
Q 044626 77 KDGFVEVIAAYQSLEDQDWFQGNADAIRRCLWVLEEY-PVTEFLILPGHHLYK--MDYQRLIE----AHRNNKADITIVA 149 (429)
Q Consensus 77 ~~~~v~i~~~~~~~~~~~~~~Gt~~al~~~~~~i~~~-~~~~~lvl~gD~i~~--~~l~~~~~----~~~~~~~~~ti~~ 149 (429)
.+ +. ++ ++.||+.++..+.. +... ..+.+++++||+++. ..|..+++ +|++ ++.+|+..
T Consensus 74 ---~~-i~---e~-----~~~gta~ai~~a~~-l~~~~~~~~~lvl~~D~~~~~~~~~~~~l~~~~~~~~~-~~~vt~~i 139 (337)
T 2cu2_A 74 ---RL-LL---EP-----LGRDTAGAVLLGVA-EALKEGAERLLVLPADHYVGDDEAYREALATMLEAAEE-GFVVALGL 139 (337)
T ss_dssp ---EE-EE---ES-----SCCHHHHHHHHHHH-HHHHHTCSEEEEEESSCEESCHHHHHHHHHHHHHHCCT-TCEEEEEE
T ss_pred ---ce-Ee---cC-----CCCCcHHHHHHHHH-HhccCCCCEEEEEECCccCCCHHHHHHHHHHHHHHHHc-CCeEEEee
Confidence 11 21 11 24799999998877 5321 237899999999773 24555444 3433 45566655
Q ss_pred EeccCCCCCCccEEEEcCC----CCEEEEEecCcccccccccCCCCCCCCCCCCCCcceeeEEEEcHHHHHHHHHhhCCC
Q 044626 150 LNAIRDKHPGFGLLRVNPV----NQVIEFSMKSERETITSISGKSSRKSDSVASGNFPSMGIYLINRDTMSRLLKEYLPE 225 (429)
Q Consensus 150 ~~~~~~~~~~~g~v~~d~~----~~v~~~~ek~~~~~~~~~~~~~~~~~~~~~~~~~~~~Giy~~~~~~l~~~l~~~~~~ 225 (429)
.+.. .+..||++..+++ ++|..|.|||..+....+ .... +++++|+|+|+++.|.+.++...++
T Consensus 140 ~p~~--~~t~yG~I~~~~~~~~~~~V~~f~EKp~~~~a~~~---------~~~g-~~~n~Giy~f~~~~ll~~l~~~~p~ 207 (337)
T 2cu2_A 140 RPTR--PETEYGYIRLGPREGAWYRGEGFVEKPSYAEALEY---------IRKG-YVWNGGVFAFAPATMAELFRRHLPS 207 (337)
T ss_dssp CCSS--CCSSSCEEEEEEEETTEEEEEEEECCCCHHHHHHH---------HHTT-CEEEEEEEEECHHHHHHHHHHHCHH
T ss_pred ccCC--CCCCceEEEECCcccccCeEEEEEeCCChHHHHHH---------hhcC-CEEEEEEEEEeHHHHHHHHHHHCHH
Confidence 4432 3468999988765 789999999874321000 0002 6899999999999885455543221
Q ss_pred C-ccc--------ccccchh---------cccCCceEEEEEecceEEecCCHHHHHHHh
Q 044626 226 A-TDL--------GSEVIPA---------AISIGMKVEAYLFDGYWEDMRSIEAFYHAN 266 (429)
Q Consensus 226 ~-~~~--------~~d~l~~---------l~~~g~~i~~~~~~~~~~~i~t~~~~~~an 266 (429)
. ..+ ..+.++. +++++.++.+++++++|.|++|+++|+++.
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~sidy~vme~~~~v~v~~~~~~W~DvGt~~~l~~~~ 266 (337)
T 2cu2_A 208 HHEALERLLAGASLEEVYAGLPKISIDYGVMEKAERVRVVLGRFPWDDVGNWRALERVF 266 (337)
T ss_dssp HHHHHHHHHTTCCHHHHHHTSCCCCHHHHTGGGCSSEEEEEECSCEECCCSTTHHHHHH
T ss_pred HHHHHHHHhcCCcHHHHHhhCccchHHHHHhhCCCcEEEEEeCCcEEcCCCHHHHHHHh
Confidence 0 000 1223333 455567899999999999999999999984
No 24
>3tqd_A 3-deoxy-manno-octulosonate cytidylyltransferase; cell envelope; 1.80A {Coxiella burnetii} SCOP: c.68.1.0
Probab=99.92 E-value=5.8e-24 Score=196.57 Aligned_cols=235 Identities=12% Similarity=0.106 Sum_probs=161.4
Q ss_pred CeEEEEEcCCCCCCcccccccccccccccCCcchhHHHHHHhhHhcCCCeEEEEeecChhHHHHHHhccccCcccCCCCc
Q 044626 1 SVAAVVFGDGSESRLYPLTKRRSEGAIPLAANYRLVDAVVSNCINSNINKIYALTQFNSTSLNLHLSRAFSGILRGKDGF 80 (429)
Q Consensus 1 ~m~avIla~G~gsRl~plt~~~pK~Llpi~g~~plI~~~i~~l~~~gi~~I~Iv~~~~~~~i~~~l~~~~~~~~~~~~~~ 80 (429)
++.|||||+|.||||+ ||+|+|++|+ |||+|+++.+.++|+++|+|+++ .+.+.+++.+ ++.
T Consensus 9 ~~~aIIlA~G~stRl~------~K~L~~i~Gk-Pli~~~l~~l~~~~i~~VvVvt~--~~~i~~~~~~----~g~----- 70 (256)
T 3tqd_A 9 EFRVIIPARFDSTRLP------GKALVDIAGK-PMIQHVYESAIKSGAEEVVIATD--DKRIRQVAED----FGA----- 70 (256)
T ss_dssp CCEEEEECCCC---CT------TGGGCEETTE-EHHHHHHHHHHHTTCSEEEEEES--CHHHHHHHHH----TTC-----
T ss_pred CceEEEEcCCCCCCCC------CCCeeeECCc-hHHHHHHHHHHhCCCCEEEEECC--HHHHHHHHHH----cCC-----
Confidence 3579999999999996 8999999999 99999999999999999999885 4677777764 232
Q ss_pred EEEEeccccccccCcccCcHHHHHHHHHHhhcCCCCeEEEEcCce-eE-eccHHHHHHHHHhc-CCceEEEEEeccC---
Q 044626 81 VEVIAAYQSLEDQDWFQGNADAIRRCLWVLEEYPVTEFLILPGHH-LY-KMDYQRLIEAHRNN-KADITIVALNAIR--- 154 (429)
Q Consensus 81 v~i~~~~~~~~~~~~~~Gt~~al~~~~~~i~~~~~~~~lvl~gD~-i~-~~~l~~~~~~~~~~-~~~~ti~~~~~~~--- 154 (429)
+++...+ +++.|++. +..+++.+.....+.+++++||. +. ...+..+++.+++. ++++++++.+...
T Consensus 71 -~v~~~~~-----~~~~Gt~~-i~~a~~~l~~~~~d~vlv~~gD~Pli~~~~i~~li~~~~~~~~~~~a~l~~~v~~~~~ 143 (256)
T 3tqd_A 71 -VVCMTSS-----DHQSGTER-IAEAAVALGFEDDEIIVCLQGDEPLIPPDAIRKLAEDLDEHDNVKVASLCTPITEVDE 143 (256)
T ss_dssp -EEEECCT-----TCCSHHHH-HHHHHHHTTCCTTCEEEEECTTCCCCCHHHHHHHHHHHHHCC--CEEEEEEECCCHHH
T ss_pred -eEEEeCC-----CCCCcHHH-HHHHHHHhCcCCCCEEEEEeCCcccCCHHHHHHHHHHHHhCCCCCEEEEeeEcCCHHH
Confidence 2332222 13478865 77787777421248999999999 44 66789999999874 5567666666432
Q ss_pred -CCCCCccEEEEcCCCCEEEEEecCcccccccccCCCCC--CCCCCCCCCcceeeEEEEcHHHHHHHHHhhCCCCccccc
Q 044626 155 -DKHPGFGLLRVNPVNQVIEFSMKSERETITSISGKSSR--KSDSVASGNFPSMGIYLINRDTMSRLLKEYLPEATDLGS 231 (429)
Q Consensus 155 -~~~~~~g~v~~d~~~~v~~~~ek~~~~~~~~~~~~~~~--~~~~~~~~~~~~~Giy~~~~~~l~~~l~~~~~~~~~~~~ 231 (429)
.++..++ |.+|++|+++.|.++|.... .+... .......+++...|+|.|++++|+++.+ ..++..+. .
T Consensus 144 ~~~p~~vk-vv~d~~g~~l~fsr~pip~~-----r~~~~~~~~~~~~~~~~~~~GiY~y~~~~l~~~~~-l~~s~lE~-~ 215 (256)
T 3tqd_A 144 LFNPHSTK-VVLNRRNYALYFSHAPIPWG-----RDTFSDKENLQLNGSHYRHVGIYAYRVGFLEEYLS-WDACPAEK-M 215 (256)
T ss_dssp HTCTTSCE-EEECTTSBEEEEESSCSSCC-----TTTTTCGGGCCCSSCCEEEEEEEEEEHHHHHHHHH-SCCCHHHH-H
T ss_pred hhCCCccE-EEECCCCEEeEEecCCCCCC-----CcccccccccccCCcceEEEEEEEcCHHHHHHHHh-CCCCcccc-h
Confidence 2444444 56888999999999976321 11000 0000013578999999999999985443 21222111 2
Q ss_pred ccchhc--ccCCceEEEEEecce-EEecCCHHHHHHHhHh
Q 044626 232 EVIPAA--ISIGMKVEAYLFDGY-WEDMRSIEAFYHANME 268 (429)
Q Consensus 232 d~l~~l--~~~g~~i~~~~~~~~-~~~i~t~~~~~~an~~ 268 (429)
+.+++| +++|.++.++..+++ |.+|+||+||.++++.
T Consensus 216 e~leqlr~le~G~~i~~~~~~~~~~~~idtpeDl~~a~~~ 255 (256)
T 3tqd_A 216 EALEQLRILWHGGRIHMVVAKSKCPPGVDTEEDLERVRAY 255 (256)
T ss_dssp HTCTTHHHHHTTCCCEEEECSSCCCCCCSSHHHHHHHHTT
T ss_pred hhhHHHHHHHCCCeEEEEEeCCCCCCCcCCHHHHHHHHHh
Confidence 334433 567899999999875 8999999999998754
No 25
>3k8d_A 3-deoxy-manno-octulosonate cytidylyltransferase; KDSB synthetase KDO complex, lipopolysaccharide biosynthesis magnesium, nucleotidyltransferase; HET: KDO CTP; 1.90A {Escherichia coli} SCOP: c.68.1.13 PDB: 3k8e_C 1vh1_A 3jtj_A*
Probab=99.91 E-value=1.1e-23 Score=195.65 Aligned_cols=235 Identities=12% Similarity=0.119 Sum_probs=165.8
Q ss_pred CeEEEEEcCCCCCCcccccccccccccccCCcchhHHHHHHhhHhcCCCeEEEEeecChhHHHHHHhccccCcccCCCCc
Q 044626 1 SVAAVVFGDGSESRLYPLTKRRSEGAIPLAANYRLVDAVVSNCINSNINKIYALTQFNSTSLNLHLSRAFSGILRGKDGF 80 (429)
Q Consensus 1 ~m~avIla~G~gsRl~plt~~~pK~Llpi~g~~plI~~~i~~l~~~gi~~I~Iv~~~~~~~i~~~l~~~~~~~~~~~~~~ 80 (429)
++.|||||||.||||. +|+|+|++|+ |||+|+++.+.++|+++|+|+++ .+.+.+++.+ ++.
T Consensus 18 ~~~aIIlA~G~stRlp------~K~L~~i~Gk-Pmi~~~l~~l~~~~i~~IvV~t~--~~~i~~~~~~----~g~----- 79 (264)
T 3k8d_A 18 SFVVIIPARYASTRLP------GKPLVDINGK-PMIVHVLERARESGAERIIVATD--HEDVARAVEA----AGG----- 79 (264)
T ss_dssp CCEEEEECCSCCSSST------TGGGCEETTE-EHHHHHHHHHHHTTCSEEEEEES--CHHHHHHHHH----TTC-----
T ss_pred ceEEEEEcCCCCCCCC------CcceeeECCe-EHHHHHHHHHHhCCCCEEEEECC--HHHHHHHHHH----cCC-----
Confidence 3579999999999994 6999999999 99999999999999999999884 4667777764 222
Q ss_pred EEEEeccccccccCcccCcHHHHHHHHHHhhcCCCCeEEEEcCce-eE-eccHHHHHHHHHhcCCceEEEEEeccC----
Q 044626 81 VEVIAAYQSLEDQDWFQGNADAIRRCLWVLEEYPVTEFLILPGHH-LY-KMDYQRLIEAHRNNKADITIVALNAIR---- 154 (429)
Q Consensus 81 v~i~~~~~~~~~~~~~~Gt~~al~~~~~~i~~~~~~~~lvl~gD~-i~-~~~l~~~~~~~~~~~~~~ti~~~~~~~---- 154 (429)
++....+ +++.|++. +..+.+.+.....+.+++++||. +. ...+..+++.+.+.++++++++.+...
T Consensus 80 -~v~~~~~-----~~~~Gt~~-i~~~~~~l~~~~~d~vlv~~gD~Pli~~~~i~~li~~~~~~~~~~~~~~~~v~d~~~~ 152 (264)
T 3k8d_A 80 -EVCMTRA-----DHQSGTER-LAEVVEKCAFSDDTVIVNVQGDEPMIPATIIRQVADNLAQRQVGMATLAVPIHNAEEA 152 (264)
T ss_dssp -EEEECCT-----TCCSHHHH-HHHHHHHHTCCTTCEEEEECTTCTTCCHHHHHHHHHHHHTSSCSEEEEEEECCSHHHH
T ss_pred -EEEEecC-----CCCCCHHH-HHHHHHHhccCCCCEEEEEcCCcccCCHHHHHHHHHHHhhcCCCEEEEEEEcCCHHHc
Confidence 2332222 13478866 77777777422248999999999 44 667899999998888888888877643
Q ss_pred CCCCCccEEEEcCCCCEEEEEecCcc-cccccccCCCCCCCCCCCCCCcceeeEEEEcHHHHHHHHHhhCCCCcccc-cc
Q 044626 155 DKHPGFGLLRVNPVNQVIEFSMKSER-ETITSISGKSSRKSDSVASGNFPSMGIYLINRDTMSRLLKEYLPEATDLG-SE 232 (429)
Q Consensus 155 ~~~~~~g~v~~d~~~~v~~~~ek~~~-~~~~~~~~~~~~~~~~~~~~~~~~~Giy~~~~~~l~~~l~~~~~~~~~~~-~d 232 (429)
.++... .+..|++|+++.|.++|.. +... ...+. .+ ...+++.+.|+|.|++++|.++... .++. ++ .+
T Consensus 153 ~~p~~v-kVv~d~~g~~l~fsr~~ip~~r~~-~~~~~--~~--~~~~~~~~~GiY~y~~~~l~~~~~~-~~~~--lE~~e 223 (264)
T 3k8d_A 153 FNPNAV-KVVLDAEGYALYFSRATIPWDRDR-FAEGL--ET--VGDNFLRHLGIYGYRAGFIRRYVNW-QPSP--LEHIE 223 (264)
T ss_dssp TCTTSC-EEEECTTSBEEEEESSCCSCCHHH-HHHCS--SC--CCSCCEEECSEEEEEHHHHHHHHHS-CCCH--HHHHH
T ss_pred cCCCce-EEEECCCCeEEEEecCCCCCCCcc-ccccc--cc--cCCcceEEEEEEEECHHHHHHHHhC-CCCh--hhhHH
Confidence 123333 3557889999999999752 2100 00000 00 0135789999999999999865542 1221 21 23
Q ss_pred cchhc--ccCCceEEEEEe-cceEEecCCHHHHHHHhHhh
Q 044626 233 VIPAA--ISIGMKVEAYLF-DGYWEDMRSIEAFYHANMEC 269 (429)
Q Consensus 233 ~l~~l--~~~g~~i~~~~~-~~~~~~i~t~~~~~~an~~~ 269 (429)
.+++| +++|.++.++.. +.+|.+|+||+||.+++..+
T Consensus 224 ~leqlr~le~G~~I~~~~~~~~~~~~IdtpeDl~~a~~~l 263 (264)
T 3k8d_A 224 MLEQLRVLWYGEKIHVAVAQEVPGTGVDTPEDLERVRAEM 263 (264)
T ss_dssp TCTTHHHHHTTCCEEEEECSCCCSCCCCSHHHHHHHHHHC
T ss_pred HHHHHHHHHCCCceEEEEeCCCCCCCCCCHHHHHHHHHHh
Confidence 34433 466899999865 55789999999999998654
No 26
>4fcu_A 3-deoxy-manno-octulosonate cytidylyltransferase; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.90A {Acinetobacter baumannii} PDB: 3pol_A
Probab=99.90 E-value=2e-22 Score=186.00 Aligned_cols=236 Identities=10% Similarity=0.083 Sum_probs=166.1
Q ss_pred EEEEEcCCCCCCcccccccccccccccCCcchhHHHHH-HhhHhcCCCeEEEEeecChhHHHHHHhccccCcccCCCCcE
Q 044626 3 AAVVFGDGSESRLYPLTKRRSEGAIPLAANYRLVDAVV-SNCINSNINKIYALTQFNSTSLNLHLSRAFSGILRGKDGFV 81 (429)
Q Consensus 3 ~avIla~G~gsRl~plt~~~pK~Llpi~g~~plI~~~i-~~l~~~gi~~I~Iv~~~~~~~i~~~l~~~~~~~~~~~~~~v 81 (429)
.|||||+|.|+||+ +|+|+|++|+ |||+|++ +.+.++++++|+|++++ +.+.+++.+ ++.+
T Consensus 3 ~aiIlA~G~stR~~------~K~L~~i~Gk-Pli~~~i~~~~~~~~~~~vvVvt~~--~~i~~~~~~----~g~~----- 64 (253)
T 4fcu_A 3 HIVIPARFSSSRLP------GKPLLLIHDR-PMILRVVDQAKKVEGFDDLCVATDD--ERIAEICRA----EGVD----- 64 (253)
T ss_dssp EEEEECCSCCTTST------TGGGSEETTE-EHHHHHHHHHHTCTTCCEEEEEESC--HHHHHHHHT----TTCC-----
T ss_pred EEEEEeCCCCCCCC------CCceeeECCe-EhHHHHHHHHHHhcCCCEEEEECCH--HHHHHHHHH----cCCe-----
Confidence 59999999999998 5999999999 9999999 99998899999999863 667777754 2322
Q ss_pred EEEeccccccccCcccCcHHHHHHHHHHhhcCCCCeEEEEcCce-eE-eccHHHHHHHHHhc-CCceEEEEEecc----C
Q 044626 82 EVIAAYQSLEDQDWFQGNADAIRRCLWVLEEYPVTEFLILPGHH-LY-KMDYQRLIEAHRNN-KADITIVALNAI----R 154 (429)
Q Consensus 82 ~i~~~~~~~~~~~~~~Gt~~al~~~~~~i~~~~~~~~lvl~gD~-i~-~~~l~~~~~~~~~~-~~~~ti~~~~~~----~ 154 (429)
+....+. ++.|+ +++..+++.+.....+.+++++||. +. ...+..+++.+++. +..+..++.+.. .
T Consensus 65 -v~~~~~~-----~~~Gt-~~i~~a~~~~~~~~~d~vlv~~gD~Pli~~~~i~~li~~~~~~~~~~~at~~~~~~~~~~~ 137 (253)
T 4fcu_A 65 -VVLTSAD-----HPSGT-DRLSEVARIKGWDADDIIVNVQGDEPLLPAQLVQQVAKLLVDKPNCSMSTLCEPIHALDEF 137 (253)
T ss_dssp -EEECCTT-----CCCHH-HHHHHHHHHHTCCTTCEEEECCTTCTTCCHHHHHHHHHHHHHCTTCSEEEEEEECCCHHHH
T ss_pred -EEEeCCC-----CCChH-HHHHHHHHhcCcCCCCEEEEEeCCcccCCHHHHHHHHHHHHhCCCCCEEEEeEEcCCHHHc
Confidence 3221111 23577 5788888877532248999999999 55 56789999999876 344444434432 1
Q ss_pred CCCCCccEEEEcCCCCEEEEEecCcccccccccCCCCCC-CCCCCCCCcceeeEEEEcHHHHHHHHHhhCCCCccc-ccc
Q 044626 155 DKHPGFGLLRVNPVNQVIEFSMKSERETITSISGKSSRK-SDSVASGNFPSMGIYLINRDTMSRLLKEYLPEATDL-GSE 232 (429)
Q Consensus 155 ~~~~~~g~v~~d~~~~v~~~~ek~~~~~~~~~~~~~~~~-~~~~~~~~~~~~Giy~~~~~~l~~~l~~~~~~~~~~-~~d 232 (429)
.+|..+ .+..|++|+++.|.+++.... .+.... +.......+.+.|+|.|++++|.++.+ . + ...+ ..|
T Consensus 138 ~~p~~~-kvv~d~~g~~l~fsr~~ip~~-----r~~~~~~~~~~~~~~~~~~GiY~f~~~~l~~~~~-~-~-~~~le~~e 208 (253)
T 4fcu_A 138 QRDSIV-KVVMSKQNEALYFSRATIPYD-----RDGAKRDEPTLHTQAFRHLGLYAYRVSLLQEYVT-W-E-MGKLEKLE 208 (253)
T ss_dssp HCTTSC-EEEECTTSBEEEEESSCCSCC-----TTTSSSSSCCCCSCCEEEEEEEEEEHHHHHHHTT-S-C-CCHHHHHH
T ss_pred cCCCcc-EEEECCCCeEEEecCCCCCCC-----CCcccccccccccceeEEEEEEEeCHHHHHHHHh-C-C-CCcccchh
Confidence 345554 456888999999999875321 111100 000013467899999999999986542 1 1 2222 245
Q ss_pred cchhc--ccCCceEEEEEecce-EEecCCHHHHHHHhHhhhcc
Q 044626 233 VIPAA--ISIGMKVEAYLFDGY-WEDMRSIEAFYHANMECIKR 272 (429)
Q Consensus 233 ~l~~l--~~~g~~i~~~~~~~~-~~~i~t~~~~~~an~~~l~~ 272 (429)
.+++| +++|.++.++..+++ |.+|+||+||.++++.+.++
T Consensus 209 ~le~lr~l~~G~~I~~~~~~~~~~~~IdtpeDL~~a~~~l~~r 251 (253)
T 4fcu_A 209 SLEQLRVLENGHRIAIAVAEANLPPGVDTQADLDRLNNMPVES 251 (253)
T ss_dssp TCTTHHHHHTTCCEEEEECSSCCCCCCCSHHHHHHHHTSCGGG
T ss_pred HHHHHHHHHCCCceEEEEeCCCCCCCCCCHHHHHHHHHHHHhh
Confidence 55554 467899999999999 99999999999998776543
No 27
>2y6p_A 3-deoxy-manno-octulosonate cytidylyltransferase; lipid A; HET: CTP; 2.10A {Aquifex aeolicus}
Probab=99.90 E-value=1.7e-22 Score=184.96 Aligned_cols=225 Identities=13% Similarity=0.158 Sum_probs=154.6
Q ss_pred CeEEEEEcCCCCCCcccccccccccccccCCcchhHHHHHHhhHhcCCCeEEEEeecChhHHHHHHhccccCcccCCCCc
Q 044626 1 SVAAVVFGDGSESRLYPLTKRRSEGAIPLAANYRLVDAVVSNCINSNINKIYALTQFNSTSLNLHLSRAFSGILRGKDGF 80 (429)
Q Consensus 1 ~m~avIla~G~gsRl~plt~~~pK~Llpi~g~~plI~~~i~~l~~~gi~~I~Iv~~~~~~~i~~~l~~~~~~~~~~~~~~ 80 (429)
++.|||||||.|+||+ ||+|+|++|+ |||+|+++.+.++ +++|+|++++ +++.+++.+. .
T Consensus 2 ~~~aiIlA~G~g~R~~------~K~l~~i~g~-pli~~~l~~~~~~-~~~i~v~~~~--~~i~~~~~~~-----~----- 61 (234)
T 2y6p_A 2 RRAVIIPARLGSTRLK------EKPLKNLLGK-PLIRWVVEGLVKT-GERVILATDS--ERVKEVVEDL-----C----- 61 (234)
T ss_dssp CEEEEEECCSCCTTTT------TGGGCEETTE-EHHHHHHHHHHTT-TSCEEEEESC--HHHHHHHTTT-----S-----
T ss_pred ceEEEEEcCCCCCCCC------CCcceeECCE-EHHHHHHHHHHHh-CCEEEEECCh--HHHHHHHHhc-----e-----
Confidence 4789999999999998 9999999999 9999999999999 9999999876 5677777642 1
Q ss_pred EEEEeccccccccCcccCcHHHHHHHHHHhhcCCCCeEEEEcCce-eEe-ccHHHHHHHHHhcCCceEEEEEec-cCCCC
Q 044626 81 VEVIAAYQSLEDQDWFQGNADAIRRCLWVLEEYPVTEFLILPGHH-LYK-MDYQRLIEAHRNNKADITIVALNA-IRDKH 157 (429)
Q Consensus 81 v~i~~~~~~~~~~~~~~Gt~~al~~~~~~i~~~~~~~~lvl~gD~-i~~-~~l~~~~~~~~~~~~~~ti~~~~~-~~~~~ 157 (429)
.+....+. ++.|+++++ .+++.+. .+.+++++||. +++ .++..+++.|.+.+..++++.... ...++
T Consensus 62 -~~~~~~~~-----~~~g~~~~~-~~~~~~~---~~~vlv~~~D~P~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~ 131 (234)
T 2y6p_A 62 -EVFLTPSD-----LPSGSDRVL-YVVRDLD---VDLIINYQGDEPFVYEEDIKLIFRELEKGERVVTLARKDKEAYERP 131 (234)
T ss_dssp -EEEECCTT-----CCSHHHHHH-HHHTTCC---CSEEEECCTTCCCCCHHHHHHHHHHHHHTCSEEEEEEECSGGGGCT
T ss_pred -EEEECCcc-----cccchHHHH-HHHHhCC---CCEEEEecCCcCcCCHHHHHHHHHHHHhCCCeEEEecCCHHHhcCC
Confidence 13222111 235787765 4444443 47999999999 775 778999999987664344443321 11133
Q ss_pred CCccEEEEcCCCCEEEEEecCcccccccccCCCCCCCCCCCCCCcceeeEEEEcHHHHHHHHHhhCCCCcccccccch--
Q 044626 158 PGFGLLRVNPVNQVIEFSMKSERETITSISGKSSRKSDSVASGNFPSMGIYLINRDTMSRLLKEYLPEATDLGSEVIP-- 235 (429)
Q Consensus 158 ~~~g~v~~d~~~~v~~~~ek~~~~~~~~~~~~~~~~~~~~~~~~~~~~Giy~~~~~~l~~~l~~~~~~~~~~~~d~l~-- 235 (429)
..++ +..+++|++..+.+++.... .+ +. . .+.+.++|+|+|+++.|.++.+.. ...... .+.+.
T Consensus 132 ~~~~-~~~~~~g~v~~~~e~~~~~~-----~~----~~-~-~~~~~~~giy~~~~~~l~~~~~~~-~~~~~~-~d~~~~~ 197 (234)
T 2y6p_A 132 EDVK-VVLDREGYALYFSRSPIPYF-----RK----ND-T-FYPLKHVGIYGFRKETLMEFGAMP-PSKLEQ-IEGLEQL 197 (234)
T ss_dssp TSCE-EEECTTSBEEEEESSCCSCC-----SS----CC-S-SCCEEEEEEEEEEHHHHHHHHHSC-CCHHHH-HHTCTHH
T ss_pred CceE-EEEcCCCCEeeeecCCCCcc-----cc----cc-c-ceeeEEEEEEEcCHHHHHHHHhCC-CCccch-hhHHHHH
Confidence 3444 34577899999999864210 00 00 0 135679999999999987655421 111111 11222
Q ss_pred hcccCCceEEEEEecceEEecCCHHHHHHHhHhh
Q 044626 236 AAISIGMKVEAYLFDGYWEDMRSIEAFYHANMEC 269 (429)
Q Consensus 236 ~l~~~g~~i~~~~~~~~~~~i~t~~~~~~an~~~ 269 (429)
.++.+|.++.+++.+++|.+|+||+||..+++.+
T Consensus 198 ~~~~~g~~v~~~~~~~~~~dI~t~~dl~~a~~~~ 231 (234)
T 2y6p_A 198 RLLENGIKIKVLITENYYHGVDTEEDLKIVEEKL 231 (234)
T ss_dssp HHHHTTCCCEEEECCSCCCCCCSHHHHHHHHHHC
T ss_pred HHHHCCCeEEEEEeCCcccCCCCHHHHHHHHHHH
Confidence 1344468899999999999999999999998764
No 28
>1h7e_A 3-deoxy-manno-octulosonate cytidylyltransferase; nucleotidyltransferase, CMP-KDO synthetase, nucleoside monophosphate glycosides; 1.83A {Escherichia coli} SCOP: c.68.1.13 PDB: 1gqc_A* 1gq9_A 1h6j_A 1h7f_A* 1h7g_A* 1h7h_A* 1h7t_A*
Probab=99.89 E-value=2.4e-22 Score=185.33 Aligned_cols=229 Identities=13% Similarity=0.195 Sum_probs=158.6
Q ss_pred CeEEEEEcCCCCCCcccccccccccccccCCcchhHHHHHHhhHhcCC-CeEEEEeecChhHHHHHHhccccCcccCCCC
Q 044626 1 SVAAVVFGDGSESRLYPLTKRRSEGAIPLAANYRLVDAVVSNCINSNI-NKIYALTQFNSTSLNLHLSRAFSGILRGKDG 79 (429)
Q Consensus 1 ~m~avIla~G~gsRl~plt~~~pK~Llpi~g~~plI~~~i~~l~~~gi-~~I~Iv~~~~~~~i~~~l~~~~~~~~~~~~~ 79 (429)
++.|||||||.|+|| | ||+|+|++|+ |||+|+++.+..+++ ++|+|++++ +.+.+++.+ ++
T Consensus 2 ~~~aiIlA~G~~~R~-~-----~K~l~~i~g~-pli~~~i~~~~~~~~~~~ivvv~~~--~~i~~~~~~----~~----- 63 (245)
T 1h7e_A 2 KAVIVIPARYGSSRL-P-----GKPLLDIVGK-PMIQHVYERALQVAGVAEVWVATDD--PRVEQAVQA----FG----- 63 (245)
T ss_dssp CEEEEEECCSCCSSS-T-----TGGGCEETTE-EHHHHHHHHHHTCTTCCEEEEEESC--HHHHHHHHH----TT-----
T ss_pred CeEEEEEcCCcCCCC-C-----CCcccccCCc-hHHHHHHHHHHhCCCCCeEEEECCc--HHHHHHHHH----cC-----
Confidence 578999999999999 4 9999999999 999999999999996 999999976 667777764 22
Q ss_pred cEEEEeccccccccCcccCcHHHHHHHHHHhhcCCCCeEEEEcCce-eE-eccHHHHHHHHHhc-CCceEEEEEeccC--
Q 044626 80 FVEVIAAYQSLEDQDWFQGNADAIRRCLWVLEEYPVTEFLILPGHH-LY-KMDYQRLIEAHRNN-KADITIVALNAIR-- 154 (429)
Q Consensus 80 ~v~i~~~~~~~~~~~~~~Gt~~al~~~~~~i~~~~~~~~lvl~gD~-i~-~~~l~~~~~~~~~~-~~~~ti~~~~~~~-- 154 (429)
++++...+ +++.|+++++ .+...+. .+.+++++||. +. ...+..+++.|++. ++++++++.+...
T Consensus 64 -~~~~~~~~-----~~~~g~~~~~-~~~~~~~---~~~~lv~~~D~P~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~ 133 (245)
T 1h7e_A 64 -GKAIMTRN-----DHESGTDRLV-EVMHKVE---ADIYINLQGDEPMIRPRDVETLLQGMRDDPALPVATLCHAISAAE 133 (245)
T ss_dssp -CEEEECCS-----CCSSHHHHHH-HHHHHSC---CSEEEECCTTCTTCCHHHHHHHHHHHHHCTTCCEEEEEEEECHHH
T ss_pred -CeEEeCCC-----ccCCcHHHHH-HHHHhCC---CCEEEEEcCCcCcCCHHHHHHHHHHHHhCCCCCEEEEeecCCHHH
Confidence 22332211 1236776554 4444453 38899999999 43 66789999999887 6777666655410
Q ss_pred -CCCCCccEEEEcCCCCEEEEEecCcccccccccCCCCCCCCCCCCCCcceeeEEEEcHHHHHHHHHhhCCCCccccccc
Q 044626 155 -DKHPGFGLLRVNPVNQVIEFSMKSERETITSISGKSSRKSDSVASGNFPSMGIYLINRDTMSRLLKEYLPEATDLGSEV 233 (429)
Q Consensus 155 -~~~~~~g~v~~d~~~~v~~~~ek~~~~~~~~~~~~~~~~~~~~~~~~~~~~Giy~~~~~~l~~~l~~~~~~~~~~~~d~ 233 (429)
.++... .+..+++|++..|.+++.... . .. ...+.+.++|+|+|+++.|.+++ .. ........|.
T Consensus 134 ~~~~~~~-~~~~~~~g~~~~~~~~~~~~~-r---------~~-~~~~~~~~~g~y~~~~~~l~~~~-~~-~~~~~~~td~ 199 (245)
T 1h7e_A 134 AAEPSTV-KVVVNTRQDALYFSRSPIPYP-R---------NA-EKARYLKHVGIYAYRRDVLQNYS-QL-PESMPEQAES 199 (245)
T ss_dssp HTCTTSC-EEEECTTCBEEEEESSCSSCC-T---------TG-GGCCEEEEEEEEEEEHHHHHHGG-GS-CCCHHHHHHT
T ss_pred hcCCCCc-EEEECCCCcEEEeecCCCCCC-c---------cc-ccCceeEEEEEEEcCHHHHHHHH-hC-CCCccccchh
Confidence 112222 223367889999988643210 0 00 00124679999999999886555 21 2121123456
Q ss_pred chhcc--cCCceEEEEEecceEEecCCHHHHHHHhHhhhc
Q 044626 234 IPAAI--SIGMKVEAYLFDGYWEDMRSIEAFYHANMECIK 271 (429)
Q Consensus 234 l~~l~--~~g~~i~~~~~~~~~~~i~t~~~~~~an~~~l~ 271 (429)
++.+. +.|.++.+++.++.|.||+||+||..++..+.+
T Consensus 200 ~~~~~~~~~g~~v~~~~~~~~~~dIdtp~Dl~~a~~~l~~ 239 (245)
T 1h7e_A 200 LEQLRLMNAGINIRTFEVAATGPGVDTPACLEKVRALMAQ 239 (245)
T ss_dssp CTTHHHHHTTCCEEEEECCCCCCCSSSHHHHHHHHHHHHH
T ss_pred hHHHHHHHCCCeEEEEEeCCCCCCCCCHHHHHHHHHHHHH
Confidence 65543 557899999999999999999999999877654
No 29
>1vic_A 3-deoxy-manno-octulosonate cytidylyltransferase; structural genomics; 1.80A {Haemophilus influenzae} SCOP: c.68.1.13 PDB: 1vh3_A 3duv_A*
Probab=99.88 E-value=3.7e-21 Score=179.27 Aligned_cols=244 Identities=11% Similarity=0.085 Sum_probs=161.6
Q ss_pred CeEEEEEcCCCCCCcccccccccccccccCCcchhHHHHHHhhHhcCCCeEEEEeecChhHHHHHHhccccCcccCCCCc
Q 044626 1 SVAAVVFGDGSESRLYPLTKRRSEGAIPLAANYRLVDAVVSNCINSNINKIYALTQFNSTSLNLHLSRAFSGILRGKDGF 80 (429)
Q Consensus 1 ~m~avIla~G~gsRl~plt~~~pK~Llpi~g~~plI~~~i~~l~~~gi~~I~Iv~~~~~~~i~~~l~~~~~~~~~~~~~~ 80 (429)
+|.|||||||.|+||+ +|+|+|++|+ |||+|+++.|..+++++|+|++++ +.+.+++.+ ++
T Consensus 2 ~~~aiIlA~G~g~R~~------~K~l~~~~gk-pli~~~l~~l~~~~~~~ivvv~~~--~~i~~~~~~----~~------ 62 (262)
T 1vic_A 2 SFTVIIPARFASSRLP------GKPLADIKGK-PMIQHVFEKALQSGASRVIIATDN--ENVADVAKS----FG------ 62 (262)
T ss_dssp CCEEEEECCCCCSSST------TGGGCEETTE-EHHHHHHHHHHHTTCSEEEEEESC--HHHHHHHHH----TT------
T ss_pred CcEEEEEcCCCCCCCC------CCccccCCCe-EHHHHHHHHHHhCCCceEEEECCc--HHHHHHHHh----cC------
Confidence 5789999999999996 4999999999 999999999999999999999875 457777654 22
Q ss_pred EEEEeccccccccCcccCcHHHHHHHHHHhhcCCCCeEEEEcCce-eE-eccHHHHHHHHHhcCCceEEEEEeccCC---
Q 044626 81 VEVIAAYQSLEDQDWFQGNADAIRRCLWVLEEYPVTEFLILPGHH-LY-KMDYQRLIEAHRNNKADITIVALNAIRD--- 155 (429)
Q Consensus 81 v~i~~~~~~~~~~~~~~Gt~~al~~~~~~i~~~~~~~~lvl~gD~-i~-~~~l~~~~~~~~~~~~~~ti~~~~~~~~--- 155 (429)
++++...+ .++.|++ .+..+++.+.....+.+++++||. +. ...+..+++.+.+.++++++++.+....
T Consensus 63 ~~~~~~~~-----~~~~g~~-~~~~~~~~l~~~~~~~vlv~~~D~P~i~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~ 136 (262)
T 1vic_A 63 AEVCMTSV-----NHNSGTE-RLAEVVEKLAIPDNEIIVNIQGDEPLIPPVIVRQVADNLAKFNVNMASLAVKIHDAEEL 136 (262)
T ss_dssp CEEEECCC-----SSCCHHH-HHHHHHHHTTCCTTCEEEECCTTCTTCCHHHHHHHHHHHHHHTCSEEEEEEECCCHHHH
T ss_pred CEEEECCc-----cccCChH-HHHHHHHHhccCCCCEEEEEeCCcCccCHHHHHHHHHHHHhcCCCEEEEEEecCCHHHh
Confidence 22322111 1235775 566666666432347899999998 44 6778999999988777777766654321
Q ss_pred CCCCccEEEEcCCCCEEEEEecCcc-cccccccCC-CCCCCCCCCCCCcceeeEEEEcHHHHHHHHHhhCCCCccccccc
Q 044626 156 KHPGFGLLRVNPVNQVIEFSMKSER-ETITSISGK-SSRKSDSVASGNFPSMGIYLINRDTMSRLLKEYLPEATDLGSEV 233 (429)
Q Consensus 156 ~~~~~g~v~~d~~~~v~~~~ek~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~Giy~~~~~~l~~~l~~~~~~~~~~~~d~ 233 (429)
....+..+..+++|++..|.+++.. .... ...+ .. .........+.++|+|+|+++.|..+.... +...+. .++
T Consensus 137 ~~~~~~~~~~~~~g~v~~f~~~~~~~~r~~-~~~~~~~-~~~~~p~~~~~~~giy~~~~~~l~~~~~~~-~~~~~~-~e~ 212 (262)
T 1vic_A 137 FNPNAVKVLTDKDGYVLYFSRSVIPYDRDQ-FMNLQDV-QKVQLSDAYLRHIGIYAYRAGFIKQYVQWA-PTQLEN-LEK 212 (262)
T ss_dssp TCTTSCEEEECTTSBEEEEESSCSSCCHHH-HTTCSCG-GGCCCCTTCEEEEEEEEEEHHHHHHHHHSC-CCHHHH-HHT
T ss_pred cCCCceEEEECCCCCEeeeecCCCCcCCcc-ccccccc-cccccccceEEEEEEEEeeHHHHHHHHhCC-CCchhh-hhh
Confidence 0133454555778899999887521 1000 0000 00 000000235789999999999887543321 111111 112
Q ss_pred ch--hcccCCceEEEEEec-ceEEecCCHHHHHHHhHhhhccc
Q 044626 234 IP--AAISIGMKVEAYLFD-GYWEDMRSIEAFYHANMECIKRS 273 (429)
Q Consensus 234 l~--~l~~~g~~i~~~~~~-~~~~~i~t~~~~~~an~~~l~~~ 273 (429)
++ .+++.|.++.+++.+ ++|.+|+||+||..++..+....
T Consensus 213 ~~~~~~l~~g~~v~~~~~~~~~~~dI~tpeDl~~a~~~l~~~~ 255 (262)
T 1vic_A 213 LEQLRVLYNGERIHVELAKEVPAVGVDTAEDLEKVRAILAANG 255 (262)
T ss_dssp CTTHHHHHTTCCEEEEECSSCCCCCCCSHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHCCCeEEEEEeCCCCCCCCCCHHHHHHHHHHHHhcC
Confidence 22 244457899999998 79999999999999998877544
No 30
>2xme_A CTP-inositol-1-phosphate cytidylyltransferase; CDP-inositol, DI-MYO-inositol phosphate; 1.89A {Archaeoglobus fulgidus} PDB: 2xmh_A*
Probab=99.87 E-value=3.9e-22 Score=182.47 Aligned_cols=212 Identities=11% Similarity=0.155 Sum_probs=132.6
Q ss_pred CeEEEEEcCCCCCCcccccccccccccccCCcchhHHHHHHhhHhcCCCeEEEEeecChhHHHHHHhccccCcccCCCCc
Q 044626 1 SVAAVVFGDGSESRLYPLTKRRSEGAIPLAANYRLVDAVVSNCINSNINKIYALTQFNSTSLNLHLSRAFSGILRGKDGF 80 (429)
Q Consensus 1 ~m~avIla~G~gsRl~plt~~~pK~Llpi~g~~plI~~~i~~l~~~gi~~I~Iv~~~~~~~i~~~l~~~~~~~~~~~~~~ 80 (429)
+|.|||||||.|+||+|+ ||+|+|++|+ |||+|+++.|..+ +++|+|++ ++.+++.+++.+. ++.+
T Consensus 18 ~~~~iIlA~G~g~R~~~~----~K~l~~i~g~-pli~~~l~~l~~~-~~~i~vv~-~~~~~~~~~~~~~---~~~~---- 83 (232)
T 2xme_A 18 LMKAVILAAGLGTRLGGV----PKPLVRVGGC-EIILRTMKLLSPH-VSEFIIVA-SRYADDIDAFLKD---KGFN---- 83 (232)
T ss_dssp CEEEEEEECC------CC----CGGGCEETTE-EHHHHHHHHHGGG-EEEEEEEE-STTHHHHHHHHTT---SCCC----
T ss_pred cceEEEECCcCcCcCCCC----CcEEeEECCE-EHHHHHHHHHHHh-CCEEEEEe-CChHHHHHHHHHh---cCCc----
Confidence 378999999999999976 9999999999 9999999999988 99999999 7777787876432 2221
Q ss_pred EEEEeccccccccCcccCcHHHHHHHHHHhhcCCCCeEEEEcCceeEeccH-HHHHHHHHhcCCceEEEEEeccCCCCCC
Q 044626 81 VEVIAAYQSLEDQDWFQGNADAIRRCLWVLEEYPVTEFLILPGHHLYKMDY-QRLIEAHRNNKADITIVALNAIRDKHPG 159 (429)
Q Consensus 81 v~i~~~~~~~~~~~~~~Gt~~al~~~~~~i~~~~~~~~lvl~gD~i~~~~l-~~~~~~~~~~~~~~ti~~~~~~~~~~~~ 159 (429)
+.++. +. .+..|++++++.+++.++ +++++++||..++.++ +.+++. . . +++........+..
T Consensus 84 ~~~v~--~~----~~~~g~~~~i~~a~~~~~----~~~lv~~~D~p~~~~~~~~l~~~----~-~-~~~~~~~~~~~~~~ 147 (232)
T 2xme_A 84 YKIVR--HD----RPEKGNGYSLLVAKNHVE----DRFILTMGDHVYSQQFIEKAVRG----E-G-VIADREPRFVDIGE 147 (232)
T ss_dssp EEEEE--CS----CGGGCHHHHHHTTGGGCC----SSEEEEETTEEECHHHHHHHTTC----C-E-EEEESSCSSSCTTT
T ss_pred EEEEE--CC----CCCCCcHHHHHHHHHHCC----CCEEEEcCCcccCHHHHHHHHhC----C-C-cEEEccccccCCCc
Confidence 33332 11 122699999999887765 6799999999775543 444432 1 1 22221111123345
Q ss_pred ccEEEEcCCCCEEEEEecCcccccccccCCCCCCCCCCCCCCcceeeEEEEcHHHHHHHHHhhCCCCcccccccchhccc
Q 044626 160 FGLLRVNPVNQVIEFSMKSERETITSISGKSSRKSDSVASGNFPSMGIYLINRDTMSRLLKEYLPEATDLGSEVIPAAIS 239 (429)
Q Consensus 160 ~g~v~~d~~~~v~~~~ek~~~~~~~~~~~~~~~~~~~~~~~~~~~~Giy~~~~~~l~~~l~~~~~~~~~~~~d~l~~l~~ 239 (429)
++.+..+ +|++..+.+++. .+++.++|+|+++++.|. .+++....... -+..+++
T Consensus 148 ~~~v~~~-~g~v~~~~~~~~-------------------~~~~~~~g~~~~~~~~~~-~l~~~~~~g~~----~l~~ll~ 202 (232)
T 2xme_A 148 ATKIRVE-DGRVAKIGKDLR-------------------EFDCVDTGFFVLDDSIFE-HAEKLRDREEI----PLSEIVK 202 (232)
T ss_dssp SCEEEEE-TTEEEEEETTCS-------------------SCSEEEEEEEEECTTHHH-HHGGGTTSSCC----CHHHHHH
T ss_pred ceEEEEc-CCEEEEeecCCC-------------------CcceEEEEEEEECHHHHH-HHHHHHhcChh----HHHHHHH
Confidence 6666665 688999988753 245678999999999987 55543211111 1233343
Q ss_pred CCceEEEEEec-ceEEecCCHHHHHHHhHh
Q 044626 240 IGMKVEAYLFD-GYWEDMRSIEAFYHANME 268 (429)
Q Consensus 240 ~g~~i~~~~~~-~~~~~i~t~~~~~~an~~ 268 (429)
+ .++..+.++ ++|.+|+||+||.++++.
T Consensus 203 ~-~~v~~~~~~~~~~~dI~tpeDl~~a~~~ 231 (232)
T 2xme_A 203 L-ARLPVTYVDGELWMDVDTKEDVRRANRA 231 (232)
T ss_dssp H-HTCBEEECCSCCEEEEECC---------
T ss_pred c-CCEEEEEECCCCEEeCCCHHHHHHHHhh
Confidence 3 245566664 689999999999988754
No 31
>3f1c_A Putative 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 2; structural genomics, PSI-2, protein structure initiative; 2.30A {Listeria monocytogenes str} SCOP: c.68.1.0
Probab=99.86 E-value=4.4e-21 Score=176.97 Aligned_cols=225 Identities=12% Similarity=0.101 Sum_probs=154.7
Q ss_pred eEEEEEcCCCCCCcccccccccccccccCCcchhHHHHHHhhHhcC-CCeEEEEeecChhH-HHHHHhccccCcccCCCC
Q 044626 2 VAAVVFGDGSESRLYPLTKRRSEGAIPLAANYRLVDAVVSNCINSN-INKIYALTQFNSTS-LNLHLSRAFSGILRGKDG 79 (429)
Q Consensus 2 m~avIla~G~gsRl~plt~~~pK~Llpi~g~~plI~~~i~~l~~~g-i~~I~Iv~~~~~~~-i~~~l~~~~~~~~~~~~~ 79 (429)
+.|||||||.|+||++ ..+||+|+|++|+ |||+|+|+.|.+++ +++|+|++++.... +.+.+.+. . +. .
T Consensus 4 ~~aIIlAaG~g~Rm~~--~~~pK~l~~l~Gk-pll~~~l~~~~~~~~~~~ivvv~~~~~~~~~~~~~~~~-~-~~----~ 74 (246)
T 3f1c_A 4 IYAQILAGGKGTRMGN--VSMPKQFLPLNGK-PIIVHTVEKFILNTRFDKILISSPKEWMNHAEDNIKKY-I-SD----D 74 (246)
T ss_dssp EEEEEECC-----C-C--SSCCGGGSEETTE-EHHHHHHHHHHTCTTCSEEEEEECGGGHHHHHHHHHHH-C-CC----T
T ss_pred cEEEEECCccccccCC--CCCCCeEEEECCe-eHHHHHHHHHHcCCCCCEEEEEeCHHHHHHHHHHHHHh-C-CC----C
Confidence 5799999999999986 4689999999999 99999999999997 99999999876543 44444432 1 11 1
Q ss_pred cEEEEeccccccccCcccCcHHHHHHHHHHhhc----CCCCeEEEEcCce-eE-eccHHHHHHHHHhcCCceEEEEEecc
Q 044626 80 FVEVIAAYQSLEDQDWFQGNADAIRRCLWVLEE----YPVTEFLILPGHH-LY-KMDYQRLIEAHRNNKADITIVALNAI 153 (429)
Q Consensus 80 ~v~i~~~~~~~~~~~~~~Gt~~al~~~~~~i~~----~~~~~~lvl~gD~-i~-~~~l~~~~~~~~~~~~~~ti~~~~~~ 153 (429)
.+.+... ..+..++++.+++.+.. ...+.+++++||. +. ...+..+++.+.+.++.++. .+..
T Consensus 75 ~~~~~~~---------~~~~~~sv~~al~~l~~~~~~~~~~~vlv~~~d~Pli~~~~i~~li~~~~~~~a~i~~--~~~~ 143 (246)
T 3f1c_A 75 RIVVIEG---------GEDRNETIMNGIRFVEKTYGLTDDDIIVTHDAVRPFLTHRIIEENIDAALETGAVDTV--IEAL 143 (246)
T ss_dssp TEEEEEC---------CSSHHHHHHHHHHHHHHHTCCCTTCEEEEEETTCTTCCHHHHHHHHHHHHHTSEEEEE--EECS
T ss_pred CEEEECC---------CCchHHHHHHHHHHHhhhhcCCCCCEEEEecCcccCCCHHHHHHHHHHHHhcCCEEEE--Eecc
Confidence 1333321 13667899999988864 1247999999998 44 66789999999887654433 3332
Q ss_pred CCCCCCccEEEEcCCCCEEEEEecCcccccccccCCCCCCCCCCCCCCcceeeEEEEcHHHHHHHHHhhCCCCccccccc
Q 044626 154 RDKHPGFGLLRVNPVNQVIEFSMKSERETITSISGKSSRKSDSVASGNFPSMGIYLINRDTMSRLLKEYLPEATDLGSEV 233 (429)
Q Consensus 154 ~~~~~~~g~v~~d~~~~v~~~~ek~~~~~~~~~~~~~~~~~~~~~~~~~~~~Giy~~~~~~l~~~l~~~~~~~~~~~~d~ 233 (429)
+ .++..++++.+..+.+|+.. +..-..+.|+.+.|.+.++..........+|.
T Consensus 144 --d----~i~~~~~~~~v~~~~~r~~l---------------------~~~qtpq~f~~~~L~~a~~~~~~~~~~~~TD~ 196 (246)
T 3f1c_A 144 --D----TIVESSNHEVITDIPVRDHM---------------------YQGQTPQSFNMKKVFNHYQNLTPEKKQILTDA 196 (246)
T ss_dssp --S----CEEECSSSSBCCBCCCGGGE---------------------EEEEEEEEEEHHHHHHHHHTSCHHHHHHCCCH
T ss_pred --c----eEEEecCCCeEEEecChHHh---------------------hhhcCCceeEHHHHHHHHHHHHHcCCCccCcH
Confidence 1 34444445555555554321 11224569998888777765311122345777
Q ss_pred chhcccCCceEEEEEecceEEecCCHHHHHHHhHhhhccc
Q 044626 234 IPAAISIGMKVEAYLFDGYWEDMRSIEAFYHANMECIKRS 273 (429)
Q Consensus 234 l~~l~~~g~~i~~~~~~~~~~~i~t~~~~~~an~~~l~~~ 273 (429)
...+...|.++..++.+.+|++|+||+||..++..+.++.
T Consensus 197 ~~~~~~~g~~v~~v~~~~~~~~Itt~~Dl~~ae~~l~~~~ 236 (246)
T 3f1c_A 197 CKICLLAGDDVKLVKGEIFNIKITTPYDLKVANAIIQERI 236 (246)
T ss_dssp HHHHHHTTCCCEEEECCTTCCCCCSHHHHHHHHHHHHHHC
T ss_pred HHHHHHcCCCEEEEeCCCCccCcCCHHHHHHHHHHHhccc
Confidence 7777777899999999999999999999999998887665
No 32
>2vsh_A TARI, 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; nucleotidyltransferase; HET: 1PE PG4 P6G; 2.00A {Streptococcus pneumoniae} PDB: 2vsi_A*
Probab=99.86 E-value=4.8e-21 Score=175.45 Aligned_cols=223 Identities=9% Similarity=0.049 Sum_probs=141.5
Q ss_pred eEEEEEcCCCCCCcccccccccccccccCCcchhHHHHHHhhHhc-CCCeEEEEeecCh-hHHHHHHhccccCcccCCCC
Q 044626 2 VAAVVFGDGSESRLYPLTKRRSEGAIPLAANYRLVDAVVSNCINS-NINKIYALTQFNS-TSLNLHLSRAFSGILRGKDG 79 (429)
Q Consensus 2 m~avIla~G~gsRl~plt~~~pK~Llpi~g~~plI~~~i~~l~~~-gi~~I~Iv~~~~~-~~i~~~l~~~~~~~~~~~~~ 79 (429)
|.|||||||.|+||++ ..+||+|+|++|+ |||+|+++.|.++ ++++|+|+++++. +.+.+++.+ ++.+...
T Consensus 3 ~~~iIlA~G~g~R~~~--~~~~K~l~~i~g~-pli~~~l~~l~~~~~~~~i~vv~~~~~~~~~~~~~~~----~~~~~~~ 75 (236)
T 2vsh_A 3 IYAGILAGGTGTRMGI--SNLPKQFLELGDR-PILIHTIEKFVLEPSIEKIVVGVHGDWVSHAEDLVDK----YLPLYKE 75 (236)
T ss_dssp EEEEEEEC-------------CGGGSEETTE-EHHHHHHHHHHTCTTCCCEEEEECGGGHHHHHHHHHH----HCGGGGG
T ss_pred eEEEEeCCccccccCC--CCCCCeeeeeCCc-cHHHHHHHHHHcCCCCCeEEEEeCHHHHHHHHHHHHh----ccccccC
Confidence 5799999999999997 5689999999999 9999999999998 4999999999876 556666654 2211100
Q ss_pred cEEEEeccccccccCcccCcHHHHHHHHHHhhc--C--CCCeEEEEcCce-eE-eccHHHHHHHHHhcCCceEEEEEecc
Q 044626 80 FVEVIAAYQSLEDQDWFQGNADAIRRCLWVLEE--Y--PVTEFLILPGHH-LY-KMDYQRLIEAHRNNKADITIVALNAI 153 (429)
Q Consensus 80 ~v~i~~~~~~~~~~~~~~Gt~~al~~~~~~i~~--~--~~~~~lvl~gD~-i~-~~~l~~~~~~~~~~~~~~ti~~~~~~ 153 (429)
.++.. .. ..|+.++++.+++.+.. . ..+.+++++||+ +. ...+..+++.|++.++ . +++.+..
T Consensus 76 ~~~~~---~~------~~~~~~~i~~~l~~~~~~~~~~~~~~vlv~~~D~P~~~~~~i~~l~~~~~~~~~-~-~~~~~~~ 144 (236)
T 2vsh_A 76 RIIIT---KG------GADRNTSIKNIIEAIDAYRPLTPEDIVVTHDSVRPFITLRMIQDNIQLAQNHDA-V-DTVVEAV 144 (236)
T ss_dssp GEEEE---EC------CSSHHHHHHHHHHHHHHHSCCCTTCEEEEEETTCTTCCHHHHHHHHHHHHHSSE-E-EEEEECC
T ss_pred ceEEE---CC------CCchHHHHHHHHHHHHhhccCCCCCEEEEecCCcccCCHHHHHHHHHHHHhcCc-E-EEEEecc
Confidence 11111 10 14788999999888742 1 136799999999 55 6678999999887654 2 3333332
Q ss_pred CCCCCCccEEEEcCCC-CEEEEEecCcccccccccCCCCCCCCCCCCCCcceeeEEEEcHHHHHHHHHhhCCCCcccccc
Q 044626 154 RDKHPGFGLLRVNPVN-QVIEFSMKSERETITSISGKSSRKSDSVASGNFPSMGIYLINRDTMSRLLKEYLPEATDLGSE 232 (429)
Q Consensus 154 ~~~~~~~g~v~~d~~~-~v~~~~ek~~~~~~~~~~~~~~~~~~~~~~~~~~~~Giy~~~~~~l~~~l~~~~~~~~~~~~d 232 (429)
++ +..+++| ++..+.+++.. ......++|+++.|.+.++...........+
T Consensus 145 --~~-----~~~~~~g~~~~~~~~~~~~---------------------~~~~~p~~f~~~~l~~~~~~~~~~g~~~~~~ 196 (236)
T 2vsh_A 145 --DT-----IVESTNGQFITDIPNRAHL---------------------YQGQTPQTFRCKDFMDLYGSLSDEEKEILTD 196 (236)
T ss_dssp --SC-----EEECSSSSBCCBCCCGGGE---------------------EEEEEEEEEEHHHHHHHHHTCCHHHHHHCCS
T ss_pred --cc-----EEEeCCCCeeeeecChHHh---------------------eeecCCcEecHHHHHHHHHHHHhcCCCcCCC
Confidence 22 2223456 66666554321 1112478899988876665421111110344
Q ss_pred cchhcccCCceEEEEEecceEEecCCHHHHHHHhHhhh
Q 044626 233 VIPAAISIGMKVEAYLFDGYWEDMRSIEAFYHANMECI 270 (429)
Q Consensus 233 ~l~~l~~~g~~i~~~~~~~~~~~i~t~~~~~~an~~~l 270 (429)
.+..+...+.++..++.+++|.||+||+||..++..+.
T Consensus 197 ~~~~l~~~~~~v~~~~~~~~~~dIdtpeDl~~a~~~~~ 234 (236)
T 2vsh_A 197 ACKIFVIKGKDVALAKGEYSNLKITTVTDLKIAKSMIE 234 (236)
T ss_dssp HHHHHHHTTCCEEEEECCTTCCCCCSHHHHHHHHHHTC
T ss_pred HHHHHHHcCCCEEEEECCccccCcCCHHHHHHHHHHhh
Confidence 44555555678988888889999999999999987653
No 33
>2iu8_A LPXD, UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; UDP-3- O-acyl-glucosamine N-acyltransferase, lipid A biosynthesis; HET: PLM UD1; 2.2A {Chlamydia trachomatis} PDB: 2iu9_A* 2iua_A*
Probab=99.85 E-value=1.4e-21 Score=191.11 Aligned_cols=265 Identities=15% Similarity=0.150 Sum_probs=136.6
Q ss_pred eEEEEcCceeEec--cHHHHHHHHHhcCCceEEEEEeccCCCCCCccEEEEcC--CCCEEEEEecCcccccccccCCCCC
Q 044626 117 EFLILPGHHLYKM--DYQRLIEAHRNNKADITIVALNAIRDKHPGFGLLRVNP--VNQVIEFSMKSERETITSISGKSSR 192 (429)
Q Consensus 117 ~~lvl~gD~i~~~--~l~~~~~~~~~~~~~~ti~~~~~~~~~~~~~g~v~~d~--~~~v~~~~ek~~~~~~~~~~~~~~~ 192 (429)
.=|+-.+|+++.. +|++++++|. +++.. .+++..+|+..+++ ++++ .|.|||..+.
T Consensus 12 ~~~~~~~dhiy~m~~~l~~i~~~h~-----~tl~g----~~~~~~~Gv~~ld~a~~g~I-~F~ekPk~~~---------- 71 (374)
T 2iu8_A 12 SGLVPRGSHMSQSTYSLEQLADFLK-----VEFQG----NGATLLSGVEEIEEAKTAHI-TFLDNEKYAK---------- 71 (374)
T ss_dssp ---------CCSCCEEHHHHHHHTT-----CEEES----CTTCEECEECCTTTCCTTEE-EECCSSSTHH----------
T ss_pred cCcccCccccccCcCcHHHHHHhhC-----CEEEC----CCcceEEEEeccccCCCCeE-EEEeCchhhh----------
Confidence 3456689999976 9999999885 34532 34567788877764 4566 9999987532
Q ss_pred CCCCCCCCCcceeeEEEEcHHHHHHHHHhhCCCCcccccccchhcccCCceEEEEEecceEEec--CCHHHHHHHhHhhh
Q 044626 193 KSDSVASGNFPSMGIYLINRDTMSRLLKEYLPEATDLGSEVIPAAISIGMKVEAYLFDGYWEDM--RSIEAFYHANMECI 270 (429)
Q Consensus 193 ~~~~~~~~~~~~~Giy~~~~~~l~~~l~~~~~~~~~~~~d~l~~l~~~g~~i~~~~~~~~~~~i--~t~~~~~~an~~~l 270 (429)
...+.++|+|+|+++++.++ . .| .+.++ ++.++ +...|....+|++. .++
T Consensus 72 ------~~~~~~aGiyI~~~~~l~~~-~-------~~-~~~~p-l~~~~-~~~a~~~~~~~~~~~i~~~----------- 123 (374)
T 2iu8_A 72 ------HLKSSEAGAIIISRTQFQKY-R-------DL-NKNFL-ITSES-PSLVFQKCLELFITPVDSG----------- 123 (374)
T ss_dssp ------HHHTCCCSEEEEEHHHHHTS-T-------TS-CSCEE-EESSC-HHHHHHHHHTTTSCCCCCS-----------
T ss_pred ------hhhcCCcEEEEeChhHhhhc-c-------cc-ccceE-EEeCC-HHHHHHHHHHHhccccccc-----------
Confidence 12456899999999877421 1 13 45666 55442 33222222334332 111
Q ss_pred cccCCCcceeCCCCceecCCccCCCeEEe-eeEe------e-CeEECCCcEEcc-eEee-CcEEcCCcEECCCCEEecCe
Q 044626 271 KRSNMRYNFYDRDCPVYTMPRCLPPTMIR-EAVI------R-DSVVGDGCIINR-CKIK-GTVIGMRTRIGDGAVIEDSV 340 (429)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~i~~~~~i~-~~~i------~-~~~ig~~~~i~~-~~v~-~~~ig~~~~ig~~~~i~~~~ 340 (429)
....++.+++++++.+++++.|+|+++|. ++.| . ++.|+++|.|++ +.+. +++|+.+++||++|.|+.++
T Consensus 124 ~~~i~~~~~i~~~a~Ig~~~~I~~~~~I~~~~~IG~~~~I~~~~~Ig~~~~IG~~~~I~~~~~I~~~~~IG~~~~I~~~~ 203 (374)
T 2iu8_A 124 FPGIHPTAVIHPTAIIEDHVCIEPYAVVCQHAHVGSACHIGSGSVIGAYSTVGEHSYIHPRVVIRERVSIGKRVIIQPGA 203 (374)
T ss_dssp CCSBCTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECSSEEECTTCEECTTC
T ss_pred cCccCCCCEECCCcEECCCCEECCCCEECCCCEECCCCEECCCcEECCCcEECCceeeCCCcEEcccceECCCCEECCCC
Confidence 11223456666666666666666666663 2222 1 222333333333 2222 33333333333333333333
Q ss_pred EECCccccccccc-ccCCccccCC----cceeEeCCCCe----------------e-cceEEecCcEECCCcEEecCCCC
Q 044626 341 IMGADFYQQGEDI-QSSGKCINHK----AIPVGIGEDTQ----------------I-KKAVIDKNARIGKNVLIINKDGV 398 (429)
Q Consensus 341 ~~~~~~~~~~~~~-~~~~~~~~~~----~~~~~ig~~~~----------------i-~~~~ig~~~~ig~~~~i~~~~~~ 398 (429)
+++.+.++..... .++.++.+.+ +..|.||.++. | ..+.|+++|+||++|.|.++..+
T Consensus 204 ~Ig~~~~~~~~~~~~~~~~i~~~g~v~Ig~~v~IG~~~~I~~~~~~~t~ig~~~~i~~~v~I~~~v~IG~~~~i~~~~~v 283 (374)
T 2iu8_A 204 VIGSCGFGYVTSAFGQHKHLKHLGKVIIEDDVEIGANTTIDRGRFKHSVVREGSKIDNLVQIAHQVEVGQHSMIVAQAGI 283 (374)
T ss_dssp EEEEECSCEEEETTTEEEECCCCCCEEECTTCEECTTCEEEECSSSCEEECTTCEECTTCEECTTCEECTTCEECTTCEE
T ss_pred EECcCCcccccccCCceeEeeeeccEEECCCCEECCCcEEccCcccceeECCCcEECCccccCCccEECCCCEEccCccc
Confidence 3322111110000 0000110000 11133333333 3 23567889999999999999999
Q ss_pred CCCeeecCCeEEccCE-----EEEcCCCEeCCCccC
Q 044626 399 QEGDREANGYIISEGI-----VVIIHGAEIADGSII 429 (429)
Q Consensus 399 ~~~~~~~~~~~i~~~~-----~~i~~~~~i~~~~vv 429 (429)
.++.++|++|+|++++ +.||++++|+++|+|
T Consensus 284 ~~~~~Ig~~~~Ig~~~~i~~~v~Ig~~~~I~a~s~V 319 (374)
T 2iu8_A 284 AGSTKIGNHVIIGGQAGITGHICIADHVIMMAQTGV 319 (374)
T ss_dssp CTTCEECSSCEECTTCEECSSCEECTTEEECTTCEE
T ss_pred CCCcEECCCeEEecCcEECCCcccCCCcEEccCcee
Confidence 9999999999998873 566667777777654
No 34
>2yc3_A 2-C-methyl-D-erythritol 4-phosphate cytidylyltran chloroplastic; transferase, non-mevalonate-pathway, herbicide, allosteric P; HET: MW5; 1.40A {Arabidopsis thaliana} PDB: 2yc5_A* 1w77_A* 2ycm_A*
Probab=99.83 E-value=4.1e-20 Score=168.44 Aligned_cols=219 Identities=10% Similarity=0.025 Sum_probs=142.4
Q ss_pred CeEEEEEcCCCCCCcccccccccccccccCCcchhHHHHHHhhHhc-CCCeEEEEeecChhHHHHHHhccccCcccCCCC
Q 044626 1 SVAAVVFGDGSESRLYPLTKRRSEGAIPLAANYRLVDAVVSNCINS-NINKIYALTQFNSTSLNLHLSRAFSGILRGKDG 79 (429)
Q Consensus 1 ~m~avIla~G~gsRl~plt~~~pK~Llpi~g~~plI~~~i~~l~~~-gi~~I~Iv~~~~~~~i~~~l~~~~~~~~~~~~~ 79 (429)
+|.|||||||.|+||+ ...||+|+|++|+ |||+|+++.+.++ ++++|+|++++..+++.+++...+ +.
T Consensus 4 ~~~aiIlAaG~g~R~~---~~~~K~l~~i~g~-pli~~~l~~l~~~~~~~~ivvv~~~~~~~~~~~~~~~~---~~---- 72 (228)
T 2yc3_A 4 SVSVILLAGGQGKRMK---MSMPKQYIPLLGQ-PIALYSFFTFSRMPEVKEIVVVCDPFFRDIFEEYEESI---DV---- 72 (228)
T ss_dssp CEEEEEECCCCC----------CGGGSEETTE-EHHHHHHHHHHHCTTEEEEEEECCGGGHHHHHTTTTTS---SS----
T ss_pred ceEEEEECCccccccC---CCCCccEeEECCE-EHHHHHHHHHHcCCCCCeEEEEEChHHHHHHHHHHHhC---CC----
Confidence 4689999999999998 4579999999999 9999999999998 799999999987766766665422 11
Q ss_pred cEEEEeccccccccCcccCcHHHHHHHHHHhhcCCCCeEEEEcCce-eE-eccHHHHHHHHHhcCCceEEEEEeccCCCC
Q 044626 80 FVEVIAAYQSLEDQDWFQGNADAIRRCLWVLEEYPVTEFLILPGHH-LY-KMDYQRLIEAHRNNKADITIVALNAIRDKH 157 (429)
Q Consensus 80 ~v~i~~~~~~~~~~~~~~Gt~~al~~~~~~i~~~~~~~~lvl~gD~-i~-~~~l~~~~~~~~~~~~~~ti~~~~~~~~~~ 157 (429)
.+.+. .. + .|..++++.+++.+.. ..+.+++++||. +. ...+..+++.|++.++ +++..+...
T Consensus 73 ~v~~~--~~---~----~~~~~sv~~al~~~~~-~~~~vl~~d~d~P~~~~~~i~~l~~~~~~~~~--~i~~~~~~~--- 137 (228)
T 2yc3_A 73 DLSFA--IP---G----KERQDSVYSGLQEIDV-NSELVCIHDSARPLVNTEDVEKVLKDGSAVGA--AVLGVPAKA--- 137 (228)
T ss_dssp EEEEE--CC---C----SSHHHHHHHHHTTSCT-TCSEEEEEETTCTTCCHHHHHHHHHHHHHHSE--EEEEEECCS---
T ss_pred cEEEE--CC---C----CCHHHHHHHHHHhhcc-CCCEEEEecCCCccCCHHHHHHHHHHHHhcCc--eEEEEeccc---
Confidence 12222 21 1 4788999999887753 236889999997 44 5678999998876653 333333221
Q ss_pred CCccEEEEcCCCCEEEEEecCcccccccccCCCCCCCCCCCCCCcceeeEEEEcHHHHHHHHHhhCCCCcccccccchhc
Q 044626 158 PGFGLLRVNPVNQVIEFSMKSERETITSISGKSSRKSDSVASGNFPSMGIYLINRDTMSRLLKEYLPEATDLGSEVIPAA 237 (429)
Q Consensus 158 ~~~g~v~~d~~~~v~~~~ek~~~~~~~~~~~~~~~~~~~~~~~~~~~~Giy~~~~~~l~~~l~~~~~~~~~~~~d~l~~l 237 (429)
.+..+++++.+..+.+++ ..+.....|.|+++.|.+.++....+ ..+..+.+..+
T Consensus 138 ---~~~~~~~~~~v~~~~~~~---------------------~~~~~~~~~~f~~~~l~~~~~~~~~~-~~~~~~~~~~l 192 (228)
T 2yc3_A 138 ---TIKEVNSDSLVVKTLDRK---------------------TLWEMQTPQVIKPELLKKGFELVKSE-GLEVTDDVSIV 192 (228)
T ss_dssp ---CCCCBCTTSCBCCCCSCC---------------------CCEEEEEEEEECHHHHHHHHHHHHHH-TCCCCSTTHHH
T ss_pred ---eEEEEcCCCceEEecCcc---------------------ceEEEeCCcEEEHHHHHHHHHHHHhc-CCCcccHHHHH
Confidence 111234344443221111 11223348999988776665432111 12345666666
Q ss_pred ccCCceEEEEEecceEEecCCHHHHHHHhHhhh
Q 044626 238 ISIGMKVEAYLFDGYWEDMRSIEAFYHANMECI 270 (429)
Q Consensus 238 ~~~g~~i~~~~~~~~~~~i~t~~~~~~an~~~l 270 (429)
.+.|.++..++.+..|.+|+||+||..++..+.
T Consensus 193 ~~~g~~v~~~~~~~~~~dIdtpeDl~~a~~~l~ 225 (228)
T 2yc3_A 193 EYLKHPVYVSQGSYTNIKVTTPDDLLLAERILS 225 (228)
T ss_dssp HHSSSCCEEEECCTTCCCCCSHHHHHHHHHHHT
T ss_pred HHcCCceEEEeCCccccCcCCHHHHHHHHHHHh
Confidence 666778876666678999999999999977654
No 35
>1vgw_A 4-diphosphocytidyl-2C-methyl-D-erythritol synthas; structural genomics, transferase; 2.35A {Neisseria gonorrhoeae} SCOP: c.68.1.13 PDB: 1vgz_A
Probab=99.82 E-value=4.8e-19 Score=161.65 Aligned_cols=216 Identities=13% Similarity=0.089 Sum_probs=132.9
Q ss_pred CeEEEEEcCCCCCCcccccccccccccccCCcchhHHHHHHhhHhcC-CCeEEEEeecChhHHHHHHhccccCcccCCCC
Q 044626 1 SVAAVVFGDGSESRLYPLTKRRSEGAIPLAANYRLVDAVVSNCINSN-INKIYALTQFNSTSLNLHLSRAFSGILRGKDG 79 (429)
Q Consensus 1 ~m~avIla~G~gsRl~plt~~~pK~Llpi~g~~plI~~~i~~l~~~g-i~~I~Iv~~~~~~~i~~~l~~~~~~~~~~~~~ 79 (429)
+|.|||||||.|+||++ ..||+|+|++|+ |||+|+++.|..++ +++|+|+++++.+.+.+ +.+. +..
T Consensus 6 ~~~aiIlA~G~g~R~~~---~~~K~l~~~~gk-pli~~~l~~l~~~~~~~~ivvv~~~~~~~~~~-~~~~----~~~--- 73 (231)
T 1vgw_A 6 KNIALIPAAGIGVRFGA---DKPKQYVEIGSK-TVLEHVLGIFERHEAVDLTVVVVSPEDTFADK-VQTA----FPQ--- 73 (231)
T ss_dssp CEEEEEECC-------------CCSCCEETTE-EHHHHHHHHHHTCTTCCEEEEECCTTCSTHHH-HHHH----CTT---
T ss_pred ceEEEEEcccccccCCC---CCCceEeEECCe-EHHHHHHHHHHcCCCCCeEEEEECccHHHHHH-HHhc----CCC---
Confidence 47899999999999995 579999999999 99999999999886 99999999887666665 5431 110
Q ss_pred cEEEEeccccccccCcccCcHHHHHHHHHHhhcC----CCCeEEEEcCce-eE-eccHHHHHHHHHhcCCceEEEEEecc
Q 044626 80 FVEVIAAYQSLEDQDWFQGNADAIRRCLWVLEEY----PVTEFLILPGHH-LY-KMDYQRLIEAHRNNKADITIVALNAI 153 (429)
Q Consensus 80 ~v~i~~~~~~~~~~~~~~Gt~~al~~~~~~i~~~----~~~~~lvl~gD~-i~-~~~l~~~~~~~~~~~~~~ti~~~~~~ 153 (429)
.+.+. .. ..|++++++.+++.+... ..+.+++++||. +. ...+..+++.+.+.+..+ +++.+..
T Consensus 74 ~i~~~--~~-------~~~~~~si~~~l~~~~~~~~~~~~~~vlv~~~D~p~~~~~~i~~l~~~~~~~~~~~-~~~~~~~ 143 (231)
T 1vgw_A 74 VRVWK--NG-------GQTRAETVRNGVAKLLETGLAAETDNILVHDAARCCLPSEALARLIEQAGNAAEGG-ILAVPVA 143 (231)
T ss_dssp SEEEC--CC-------CSSHHHHHHHHHHHHHHHSSSCTTSEEEECCTTCTTCCHHHHHHHHHHHTTCTTCE-EEEEECC
T ss_pred ceEEE--cC-------CCcHHHHHHHHHHHHhhhccCCCCCEEEEEcCCcccCCHHHHHHHHHHHhhcCCeE-EEEeecc
Confidence 13222 11 158999999998887420 237899999998 44 556789999887654223 3333322
Q ss_pred CCCCCCccEEEEcCCCCEEEEEecCcccccccccCCCCCCCCCCCCCCcceeeEEEEcHHHHHHHHHhhCCCCccccccc
Q 044626 154 RDKHPGFGLLRVNPVNQVIEFSMKSERETITSISGKSSRKSDSVASGNFPSMGIYLINRDTMSRLLKEYLPEATDLGSEV 233 (429)
Q Consensus 154 ~~~~~~~g~v~~d~~~~v~~~~ek~~~~~~~~~~~~~~~~~~~~~~~~~~~~Giy~~~~~~l~~~l~~~~~~~~~~~~d~ 233 (429)
+. . ...++|++....++ . ..+...+.++|+++.|.+.++...... ..+.
T Consensus 144 --~~----~-~~~~~g~i~~~~~~---~------------------~~~~~~~p~~f~~~~l~~~~~~~~~~g---~~~~ 192 (231)
T 1vgw_A 144 --DT----L-KRAESGQISATVDR---S------------------GLWQAQTPQLFQAGLLHRALAAENLGG---ITDE 192 (231)
T ss_dssp --SC----E-EEESSSBEEEEECC---T------------------TEEEEEEEEEEEHHHHHHHHHC----C---CCSH
T ss_pred --cc----e-EEeCCCceEecCCh---H------------------HheeeeCCcEecHHHHHHHHHHHhhcC---CCcH
Confidence 11 1 11234554432221 0 111233588999988876665421111 1222
Q ss_pred chhcccCCceEEEEEecceEEecCCHHHHHHHhHhh
Q 044626 234 IPAAISIGMKVEAYLFDGYWEDMRSIEAFYHANMEC 269 (429)
Q Consensus 234 l~~l~~~g~~i~~~~~~~~~~~i~t~~~~~~an~~~ 269 (429)
...+...+.++..++.++.|.||+||+||..++..+
T Consensus 193 ~~~~~~~~~~v~~v~~~~~~~dIdtpeDl~~a~~~l 228 (231)
T 1vgw_A 193 ASAVEKLGVRPLLIQGDARNLKLTQPQDAYIVRLLL 228 (231)
T ss_dssp HHHHHTTTCCCEEEECCTTCCCCCSHHHHHHHHHHC
T ss_pred HHHHHHcCCCEEEEECCccccCcCCHHHHHHHHHHH
Confidence 222222346788888778999999999999987654
No 36
>2xwl_A 2-C-methyl-D-erythritol 4-phosphate cytidylyltran; transferase, MEP pathway; HET: CTP; 1.49A {Mycobacterium smegmatis} PDB: 2xwm_A*
Probab=99.82 E-value=2e-19 Score=163.18 Aligned_cols=215 Identities=14% Similarity=0.071 Sum_probs=148.5
Q ss_pred CeEEEEEcCCCCCCcccccccccccccccCCcchhHHHHHHhhHhcC-CCeEEEEeecChh-HHHHHHhccccCcccCCC
Q 044626 1 SVAAVVFGDGSESRLYPLTKRRSEGAIPLAANYRLVDAVVSNCINSN-INKIYALTQFNST-SLNLHLSRAFSGILRGKD 78 (429)
Q Consensus 1 ~m~avIla~G~gsRl~plt~~~pK~Llpi~g~~plI~~~i~~l~~~g-i~~I~Iv~~~~~~-~i~~~l~~~~~~~~~~~~ 78 (429)
+|.|||||||.|+||+ ...||+|+|++|+ |||+|+++.+..++ +++|+|++++... .+.+++.. .
T Consensus 2 ~~~~vIlA~G~g~R~~---~~~~K~l~~~~g~-pli~~~l~~l~~~~~~~~i~vv~~~~~~~~~~~~~~~-~-------- 68 (223)
T 2xwl_A 2 ATVAVVPAAGSGERLR---AGRPKAFVTLGGT-PLLEHALSGLRASGVIDRIVIAVPPALTDESKLVFGG-E-------- 68 (223)
T ss_dssp CEEEEEECCCCCGGGT---SSSCGGGSEETTE-EHHHHHHHHHHHHSCCSEEEEEECGGGHHHHHHHTCB-T--------
T ss_pred ceEEEEECCccCcccC---CCCCCeeeEECCe-EHHHHHHHHHhcCCCCCeEEEEEcccHHHHHHHHhcc-C--------
Confidence 5789999999999998 4679999999999 99999999999988 9999999988653 35444421 0
Q ss_pred CcEEEEeccccccccCcccCcHHHHHHHHHHhhcCCCCeEEEEcCce-eE-eccHHHHHHHHHhcCCceEEEEEeccCCC
Q 044626 79 GFVEVIAAYQSLEDQDWFQGNADAIRRCLWVLEEYPVTEFLILPGHH-LY-KMDYQRLIEAHRNNKADITIVALNAIRDK 156 (429)
Q Consensus 79 ~~v~i~~~~~~~~~~~~~~Gt~~al~~~~~~i~~~~~~~~lvl~gD~-i~-~~~l~~~~~~~~~~~~~~ti~~~~~~~~~ 156 (429)
.+.+.. +. .+.+++++.+++.++ ..+.+++++||. +. ...+..+++.+. .+.+.++.+.+.. +
T Consensus 69 -~v~~~~--~~-------~~~~~~i~~al~~~~--~~~~vlv~~~D~P~~~~~~i~~l~~~~~-~~~~~~i~~~~~~--d 133 (223)
T 2xwl_A 69 -DSVIVS--GG-------VDRTESVALALEAAG--DAEFVLVHDAARALTPPALIARVVAALK-EGHSAVVPGLAPA--D 133 (223)
T ss_dssp -TEEEEE--CC-------SSHHHHHHHHHTTCT--TCSEEEECCTTCTTCCHHHHHHHHHHHH-HTCSEEEEEECCS--S
T ss_pred -CeEEEc--CC-------CCHHHHHHHHHHhcC--CCCEEEEEcCCcccCCHHHHHHHHHHHh-hcCCeEEEEEecc--c
Confidence 132321 11 356889999987772 237899999998 44 557899999883 2345555444432 2
Q ss_pred CCCccEEEEcCCCCEEEEEecCcccccccccCCCCCCCCCCCCCCcceeeEEEEcHHHHHHHHHhhCCCCcccccccchh
Q 044626 157 HPGFGLLRVNPVNQVIEFSMKSERETITSISGKSSRKSDSVASGNFPSMGIYLINRDTMSRLLKEYLPEATDLGSEVIPA 236 (429)
Q Consensus 157 ~~~~g~v~~d~~~~v~~~~ek~~~~~~~~~~~~~~~~~~~~~~~~~~~~Giy~~~~~~l~~~l~~~~~~~~~~~~d~l~~ 236 (429)
+.. ..+++|++..+.+++.. ......++|+++.+...++.. ...+..+....
T Consensus 134 ~~~----~~~~~g~~~~~~e~~~l---------------------~~~~~p~~f~~~~l~~~~~~~---~~~~~~~~~~~ 185 (223)
T 2xwl_A 134 TIK----AVDANGAVLGTPERAGL---------------------RAVQTPQGFHADVLRRAYARA---TAGGVTDDASL 185 (223)
T ss_dssp CEE----EECTTSBEEECCCGGGE---------------------EEECSCEEEEHHHHHHHHTTC---CSCCCCCHHHH
T ss_pred ceE----EEcCCCcEEeecChHHh---------------------eeeeCCcccCHHHHHHHHHHh---hCCCCccHHHH
Confidence 211 23667888877776421 111235788988876555432 12233444444
Q ss_pred cccCCceEEEEEecceEEecCCHHHHHHHhHhhhc
Q 044626 237 AISIGMKVEAYLFDGYWEDMRSIEAFYHANMECIK 271 (429)
Q Consensus 237 l~~~g~~i~~~~~~~~~~~i~t~~~~~~an~~~l~ 271 (429)
+...+.++..++.++.|.||+||+||..++..+.+
T Consensus 186 ~~~~~~~v~~~~~~~~~~dIdtpeDl~~a~~~l~~ 220 (223)
T 2xwl_A 186 VEQLGTPVQIVDGDPLAFKITTPLDLVLAEAVLAH 220 (223)
T ss_dssp HHTTTCCCEEEECCGGGCCCCSHHHHHHHHHHHHH
T ss_pred HHHcCCCEEEEECCcccccccCHHHHHHHHHHHhh
Confidence 44445678888888899999999999999776543
No 37
>2icy_A Probable UTP-glucose-1-phosphate uridylyltransferase 2; AT3G03250, UDP, putative UDP-glucose pyrophosphorylase; HET: UPG U5P; 1.64A {Arabidopsis thaliana} SCOP: b.81.1.4 c.68.1.5 PDB: 2icx_A* 1z90_A 2q4j_A
Probab=99.82 E-value=3.2e-19 Score=176.88 Aligned_cols=243 Identities=8% Similarity=0.015 Sum_probs=159.7
Q ss_pred CeEEEEEcCCCCCCcccccccccccccccC-CcchhHHHHHHhhHhc----C--CCeEEEEeecChhHHHHHHhccccCc
Q 044626 1 SVAAVVFGDGSESRLYPLTKRRSEGAIPLA-ANYRLVDAVVSNCINS----N--INKIYALTQFNSTSLNLHLSRAFSGI 73 (429)
Q Consensus 1 ~m~avIla~G~gsRl~plt~~~pK~Llpi~-g~~plI~~~i~~l~~~----g--i~~I~Iv~~~~~~~i~~~l~~~~~~~ 73 (429)
+|.+||||||.||||+ ...||+|+||. |+ |+|++.++++.+. | +..+++...+..+.+.+|+++... +
T Consensus 79 k~~vviLAGGlGTRLg---~~~PK~llpv~~gk-p~Le~~i~~l~~~~~~~G~~ip~vimts~~t~e~t~~~f~~~~~-f 153 (469)
T 2icy_A 79 KLVVLKLNGGLGTTMG---CTGPKSVIEVRDGL-TFLDLIVIQIENLNNKYGCKVPLVLMNSFNTHDDTHKIVEKYTN-S 153 (469)
T ss_dssp TEEEEEEECCBSGGGT---CCSBGGGSEEETTE-EHHHHHHHHHHHHHHHHSCCCCEEEEECTTTHHHHHHHHGGGTT-S
T ss_pred cceEEEEcCCccccCC---CCCCccccccCCCC-CHHHHHHHHHHHHHHhcCCCccEEEEeCCCCHHHHHHHHHhccc-C
Confidence 5889999999999996 67899999999 99 9999999999887 5 554444444558899999987433 4
Q ss_pred ccCCCCcEEEEeccccc------------------c-ccCcccCcHHHHHHH-----HHHhhcCCCCeEEEEcCceeEec
Q 044626 74 LRGKDGFVEVIAAYQSL------------------E-DQDWFQGNADAIRRC-----LWVLEEYPVTEFLILPGHHLYKM 129 (429)
Q Consensus 74 ~~~~~~~v~i~~~~~~~------------------~-~~~~~~Gt~~al~~~-----~~~i~~~~~~~~lvl~gD~i~~~ 129 (429)
+++ +.+..|.. . ....|.|+|+.+... ++.+.....++++|.++|+++..
T Consensus 154 G~~------I~~f~Q~~~P~i~~e~~~~l~~~~~~~~~e~~P~GtGG~~~~L~~sGll~~l~~~G~e~~~V~n~DnL~~~ 227 (469)
T 2icy_A 154 NVD------IHTFNQSKYPRVVADEFVPWPSKGKTDKEGWYPPGHGDVFPALMNSGKLDTFLSQGKEYVFVANSDNLGAI 227 (469)
T ss_dssp SSC------EEEEECCCEECEETTTTEEGGGGTCCSGGGEECCCGGGHHHHHHHHSHHHHHHTTTCCEEEEEETTBTTCC
T ss_pred Cce------EEEEEecceeeEccccCccccCCCCCccccCCcCCchHHHHHHHhcCcHHHHHhcCCCEEEEEECCcCCcc
Confidence 543 33222210 0 011378999998764 23333223489999999998754
Q ss_pred cHHHHHHHHHhcCCceEEEEEeccCCCC-CCccEEEEcCCCC--EEEEEecCcccccccccCCCCCCCCCCCCCCcceee
Q 044626 130 DYQRLIEAHRNNKADITIVALNAIRDKH-PGFGLLRVNPVNQ--VIEFSMKSERETITSISGKSSRKSDSVASGNFPSMG 206 (429)
Q Consensus 130 ~l~~~~~~~~~~~~~~ti~~~~~~~~~~-~~~g~v~~d~~~~--v~~~~ek~~~~~~~~~~~~~~~~~~~~~~~~~~~~G 206 (429)
....++.+|.++++++++.+.+.. ++ ..+|++... +|+ +.++.|+|...... . ++. ....+.++|
T Consensus 228 ~d~~ll~~~~~~~a~~t~~v~~k~--~~~~~~Gvl~~~-dg~~~vvE~~e~p~~~~~e-~-k~~-------~~~~~~N~g 295 (469)
T 2icy_A 228 VDLTILKHLIQNKNEYCMEVTPKT--LADVKGGTLISY-EGKVQLLEIAQVPDEHVNE-F-KSI-------EKFKIFNTN 295 (469)
T ss_dssp CCHHHHHHHHHHTCSEEEEEEECC--TTCCSSCEEEEE-TTEEEEECGGGSCGGGHHH-H-HSS-------SSCCEEEEE
T ss_pred cCHHHHHHHHHcCCCeeEEEEEec--cCCCceeEEEEE-CCEEEEEEEeccChhhhhh-h-ccc-------cccceeeEE
Confidence 434788999999999999876643 34 468887753 354 44455554421000 0 000 133567999
Q ss_pred EEEEcHHHHHHHHHhhCCC-----------------CcccccccchhcccCCceEEEEEe-cceEEecCCHHHHHHHhHh
Q 044626 207 IYLINRDTMSRLLKEYLPE-----------------ATDLGSEVIPAAISIGMKVEAYLF-DGYWEDMRSIEAFYHANME 268 (429)
Q Consensus 207 iy~~~~~~l~~~l~~~~~~-----------------~~~~~~d~l~~l~~~g~~i~~~~~-~~~~~~i~t~~~~~~an~~ 268 (429)
+|+|++++|+++.+..... .+.+..|+++.. .+..++.+ ..+|.++.++.+++.+...
T Consensus 296 ~y~~~~~~L~~i~~~~~~~lp~~v~~K~id~~~~~klE~~~~D~~~~~----~~~~~~~V~R~~F~PvKn~~dll~~~s~ 371 (469)
T 2icy_A 296 NLWVNLKAIKKLVEADALKMEIIPNPKEVDGVKVLQLETAAGAAIRFF----DNAIGVNVPRSRFLPVKASSDLLLVQSD 371 (469)
T ss_dssp EEEEEHHHHHHHHHTTCCCCCCBCCEEEETTEEEECCBCCGGGGGGGS----TTCEEEECCGGGCCBCCSHHHHHHHHST
T ss_pred EEEEcHHHHHHHHhcccCCchhhccceecCCCceEeehHhhHHHHHhc----CCeEEEEechhHcCcCCCHHHHHHHHHH
Confidence 9999999999887752110 111222333332 22444443 3579999999999998887
Q ss_pred hh
Q 044626 269 CI 270 (429)
Q Consensus 269 ~l 270 (429)
+.
T Consensus 372 l~ 373 (469)
T 2icy_A 372 LY 373 (469)
T ss_dssp TE
T ss_pred HH
Confidence 44
No 38
>1ezi_A CMP-N-acetylneuraminic acid synthetase; homodimer, alpha-beta-alpha, transferase; 2.00A {Neisseria meningitidis} SCOP: c.68.1.13 PDB: 1eyr_A
Probab=99.80 E-value=5.8e-19 Score=160.83 Aligned_cols=215 Identities=10% Similarity=0.021 Sum_probs=142.6
Q ss_pred eEEEEEcCCCCCCcccccccccccccccCCcchhHHHHHHhhHhcC-CCeEEEEeecChhHHHHHHhccccCcccCCCCc
Q 044626 2 VAAVVFGDGSESRLYPLTKRRSEGAIPLAANYRLVDAVVSNCINSN-INKIYALTQFNSTSLNLHLSRAFSGILRGKDGF 80 (429)
Q Consensus 2 m~avIla~G~gsRl~plt~~~pK~Llpi~g~~plI~~~i~~l~~~g-i~~I~Iv~~~~~~~i~~~l~~~~~~~~~~~~~~ 80 (429)
+.|||||||.|+||+ ||+|+|++|+ |||+|+++.|.+++ +++|+|++++ +.+.+++.+ ++.
T Consensus 5 ~~aiIlA~G~g~R~~------~K~l~~i~gk-pll~~~l~~~~~~~~~~~ivvv~~~--~~i~~~~~~----~~~----- 66 (228)
T 1ezi_A 5 NIAVILARQNSKGLP------LKNLRKMNGI-SLLGHTINAAISSKCFDRIIVSTDG--GLIAEEAKN----FGV----- 66 (228)
T ss_dssp EEEEEECCSSCSSST------TTTTCEETTE-EHHHHHHHHHHHHCCCSEEEEEESC--HHHHHHHHH----TTC-----
T ss_pred eEEEEecCCCCCCCC------CcccceeCCc-CHHHHHHHHHHhCCCCCEEEEECCC--HHHHHHHHH----cCC-----
Confidence 459999999999998 8999999999 99999999999988 8999999864 456666644 222
Q ss_pred EEEEeccccccccCcccCcHHHHHHHHHHhhcCCCCeEEEEcCce-eE-eccHHHHHHHHHhcCCceEEEEEeccCCCCC
Q 044626 81 VEVIAAYQSLEDQDWFQGNADAIRRCLWVLEEYPVTEFLILPGHH-LY-KMDYQRLIEAHRNNKADITIVALNAIRDKHP 158 (429)
Q Consensus 81 v~i~~~~~~~~~~~~~~Gt~~al~~~~~~i~~~~~~~~lvl~gD~-i~-~~~l~~~~~~~~~~~~~~ti~~~~~~~~~~~ 158 (429)
++.. ..... .....|++++++.+++.+.. ..+.+++++||. +. ...+..+++.+++.++++++...+... .|.
T Consensus 67 -~~~~-~~~~~-~~~~~g~~~sv~~~l~~~~~-~~d~vlv~~~D~P~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~-~p~ 141 (228)
T 1ezi_A 67 -EVVL-RPAEL-ASDTASSISGVIHALETIGS-NSGTVTLLQPTSPLRTGAHIREAFSLFDEKIKGSVVSACPMEH-HPL 141 (228)
T ss_dssp -EEEE-CCC-------CHHHHHHHHHHHHHTC-CSEEEEECCTTCTTCCHHHHHHHHTTCCTTTCCCEEEEEECSS-CTT
T ss_pred -EEEe-CchHH-cCCCCChHHHHHHHHHHhCC-CCCEEEEEcCCCCcCCHHHHHHHHHHHHhcCCCEEEEEEecCC-Ccc
Confidence 1211 11000 00125788999999988842 237899999998 44 567899998887766777776655432 132
Q ss_pred CccEEEEcCCCCEEEEEecCc-ccccccccCCCCCCCCCCCCCCcceeeEEEEcHHHHHHHHHhhCCCCcccccccchhc
Q 044626 159 GFGLLRVNPVNQVIEFSMKSE-RETITSISGKSSRKSDSVASGNFPSMGIYLINRDTMSRLLKEYLPEATDLGSEVIPAA 237 (429)
Q Consensus 159 ~~g~v~~d~~~~v~~~~ek~~-~~~~~~~~~~~~~~~~~~~~~~~~~~Giy~~~~~~l~~~l~~~~~~~~~~~~d~l~~l 237 (429)
+...++++|++..+.++.. .+.. .. .......+.|+|++++..|.+.+ .+
T Consensus 142 --~~~~~~~~g~~~~~~~~~~~~~~~----------~~-~~~~~~~~~giy~~~~~~l~~~~------------~~---- 192 (228)
T 1ezi_A 142 --KTLLQINNGEYAPMRHLSDLEQPR----------QQ-LPQAFRPNGAIYINDTASLIANN------------CF---- 192 (228)
T ss_dssp --SCEEECC--CEEESSCHHHHTCCG----------GG-SCCEEEEEEEEEEEEHHHHHHHT------------SS----
T ss_pred --eeeEEcCCCcEeeccccccccCCc----------cc-CchhheeeeEEEEEeHHHHhhCC------------cc----
Confidence 2233467788888766211 0000 00 00123457899999998775321 01
Q ss_pred ccCCceEEEEEec-ceEEecCCHHHHHHHhHhhh
Q 044626 238 ISIGMKVEAYLFD-GYWEDMRSIEAFYHANMECI 270 (429)
Q Consensus 238 ~~~g~~i~~~~~~-~~~~~i~t~~~~~~an~~~l 270 (429)
. |.++..+..+ ..|.||+||+||..++..+.
T Consensus 193 ~--g~~v~~~~~~~~~~~dIdtpeDl~~a~~~l~ 224 (228)
T 1ezi_A 193 F--IAPTKLYIMSHQDSIDIDTELDLQQAENILN 224 (228)
T ss_dssp C--CSSCEEEECCTGGGCCCCSHHHHHHHHHHHC
T ss_pred c--CCceEEEEeCcccccCCCCHHHHHHHHHHHH
Confidence 1 3566667665 58999999999999977654
No 39
>2dpw_A Hypothetical protein TTHA0179; transferase, structural genomics, NPPSFA, national project O structural and functional analyses; 2.90A {Thermus thermophilus} SCOP: c.68.1.19
Probab=99.77 E-value=1.3e-19 Score=165.56 Aligned_cols=201 Identities=14% Similarity=0.125 Sum_probs=135.1
Q ss_pred CeEEEEEcCCCCCCcccccccccccccccCCcchhHHHHHHhhHhcCCCeEEEEeecChhHHHHHHhccccCcccCCCCc
Q 044626 1 SVAAVVFGDGSESRLYPLTKRRSEGAIPLAANYRLVDAVVSNCINSNINKIYALTQFNSTSLNLHLSRAFSGILRGKDGF 80 (429)
Q Consensus 1 ~m~avIla~G~gsRl~plt~~~pK~Llpi~g~~plI~~~i~~l~~~gi~~I~Iv~~~~~~~i~~~l~~~~~~~~~~~~~~ 80 (429)
+|.|||||||. |||++.+...||+|+|++|+ |||+|+++.+..+++ +|+|++. . +.+.+++ +
T Consensus 2 ~~~~vIlAaG~-tRl~~r~~~~~K~l~~i~g~-pll~~~l~~l~~~~~-~ivvv~~-~-~~i~~~~-------~------ 63 (232)
T 2dpw_A 2 RPSAIVLAGGK-EAWAERFGVGSKALVPYRGR-PMVEWVLEALYAAGL-SPVYVGE-N-PGLVPAP-------A------ 63 (232)
T ss_dssp CCEEEEECCCB-CSGGGTTTCSBGGGSEETTE-ETHHHHHHHHHHTTC-EEEEESC-C-SSCSSCC-------S------
T ss_pred ceeEEEECCCC-CccccccCCCCceeeEECCE-EHHHHHHHHHHhcCC-EEEEEeC-h-HHHhhhc-------C------
Confidence 57899999999 77766655689999999999 999999999999998 8888754 3 3232222 1
Q ss_pred EEEEeccccccccCcccCcHHHHHHHHHHhhcCCCCeEEEEcCce--eEeccHHHHHHHHHhcCCceEEEEEeccCCCCC
Q 044626 81 VEVIAAYQSLEDQDWFQGNADAIRRCLWVLEEYPVTEFLILPGHH--LYKMDYQRLIEAHRNNKADITIVALNAIRDKHP 158 (429)
Q Consensus 81 v~i~~~~~~~~~~~~~~Gt~~al~~~~~~i~~~~~~~~lvl~gD~--i~~~~l~~~~~~~~~~~~~~ti~~~~~~~~~~~ 158 (429)
+++ . +..|++++++.+++.+. +.+++++||+ +....+..+++ | ..++++++...+.... ..
T Consensus 64 ~~~---~-------~~~g~~~~i~~a~~~~~----~~~lv~~~D~P~~~~~~i~~l~~-~-~~~~~~~~~~~~~~~~-~~ 126 (232)
T 2dpw_A 64 LTL---P-------DRGGLLENLEQALEHVE----GRVLVATGDIPHLTEEAVRFVLD-K-APEAALVYPIVPKEAV-EA 126 (232)
T ss_dssp EEE---C-------CCSSHHHHHHHHHHTCC----SEEEEEETTCTTCCHHHHHHHHH-H-CCSCSEEEEEEEHHHH-HH
T ss_pred eEe---c-------CCCCHHHHHHHHHHHcC----CCEEEEeCCcccCCHHHHHHHHh-c-CCCCCEEEEEeeccch-hh
Confidence 223 1 13699999999987774 8999999999 44667888988 6 5566666655442110 01
Q ss_pred CccEEEEcCCCCEEEEEecCcccccccccCCCCCCCCCCCCCCcceeeEEEEcHHHHHHHHHh---h--CC-C-------
Q 044626 159 GFGLLRVNPVNQVIEFSMKSERETITSISGKSSRKSDSVASGNFPSMGIYLINRDTMSRLLKE---Y--LP-E------- 225 (429)
Q Consensus 159 ~~g~v~~d~~~~v~~~~ek~~~~~~~~~~~~~~~~~~~~~~~~~~~~Giy~~~~~~l~~~l~~---~--~~-~------- 225 (429)
.|+.+ ..++..+.||+ ..++|+|+|+++.|..+.+. . .+ +
T Consensus 127 ~~~~~----~~~v~~~~ek~-----------------------~~~~g~~~~~~~~l~~~~~~~~~~~~~~~~P~~~~~~ 179 (232)
T 2dpw_A 127 RFPRT----KRTYARLREGT-----------------------FTGGNLLLLDKSLFRKALPLARRVVALRKRPLALARL 179 (232)
T ss_dssp HCTTC----CCCCEEETTEE-----------------------EEECSEEEEEHHHHTTTHHHHHHHHHTTTCHHHHHHH
T ss_pred hCCCc----ceeEEEEecCc-----------------------eeeeeEEEEcHHHHHHHHHHHHHHHHhccCHHHHHHH
Confidence 22221 12355555542 35899999999987543321 1 01 0
Q ss_pred -----------Ccccccccchhccc-CCceEEEEEe--cceEEecCCHHHHH
Q 044626 226 -----------ATDLGSEVIPAAIS-IGMKVEAYLF--DGYWEDMRSIEAFY 263 (429)
Q Consensus 226 -----------~~~~~~d~l~~l~~-~g~~i~~~~~--~~~~~~i~t~~~~~ 263 (429)
.+...+++++.+.. .|.++..+.+ ++.|.||+||+||.
T Consensus 180 ~~~~~l~~~~~ge~~l~~~~~~~~~~~g~~v~~v~~~~~~~~~dIdtpeDl~ 231 (232)
T 2dpw_A 180 VGWDVLLKLLLGRLSLAEVEARAQRILGVEARALVTPYPEVGVDVDREEDLV 231 (232)
T ss_dssp HCHHHHHHHHHTCCCHHHHHHHHHHHHSSCEEEEECSCGGGTCCCCSHHHHC
T ss_pred HCHHHHHHHHhccCCHHHHHHHHHHHhCcEEEEEecCChhhccCCCChhhcc
Confidence 12223556655542 3567888887 45799999999984
No 40
>1i52_A 4-diphosphocytidyl-2-C-methylerythritol synthase; cytidylyltransferase, deoxyxylulose-5-phosphate pathway (DXP isoprenoid biosynthesys, MEP; HET: CTP; 1.50A {Escherichia coli} SCOP: c.68.1.13 PDB: 1ini_A* 1inj_A 1vgt_A 1vgu_A 3n9w_A 1h3m_A
Probab=99.76 E-value=1e-17 Score=153.32 Aligned_cols=220 Identities=14% Similarity=0.129 Sum_probs=140.3
Q ss_pred CeEEEEEcCCCCCCcccccccccccccccCCcchhHHHHHHhhHhcC-CCeEEEEeecChhHHHHHHhccccCcccCCCC
Q 044626 1 SVAAVVFGDGSESRLYPLTKRRSEGAIPLAANYRLVDAVVSNCINSN-INKIYALTQFNSTSLNLHLSRAFSGILRGKDG 79 (429)
Q Consensus 1 ~m~avIla~G~gsRl~plt~~~pK~Llpi~g~~plI~~~i~~l~~~g-i~~I~Iv~~~~~~~i~~~l~~~~~~~~~~~~~ 79 (429)
+|.|||||||.|+||+ ...||+|+|++|+ |||+|+++.+..++ +++|+|+++++.+.+.+ +.. ++..
T Consensus 7 ~~~~iIlA~G~g~R~~---~~~~K~l~~i~g~-pll~~~i~~l~~~~~~~~ivvv~~~~~~~~~~-~~~----~~~~--- 74 (236)
T 1i52_A 7 DVCAVVPAAGFGRRMQ---TECPKQYLSIGNQ-TILEHSVHALLAHPRVKRVVIAISPGDSRFAQ-LPL----ANHP--- 74 (236)
T ss_dssp CEEEEEEECCCCGGGC---CSSCGGGSEETTE-EHHHHHHHHHHTSTTEEEEEEEECTTCCSGGG-SGG----GGCT---
T ss_pred ceeEEEECCcCccccC---CCCCcceeeECCE-EHHHHHHHHHHhCCCCCeEEEEeCccHHHHHH-HHh----cCCC---
Confidence 4789999999999998 4579999999999 99999999999887 89999999876554443 322 1110
Q ss_pred cEEEEeccccccccCcccCcHHHHHHHHHHhhcCCCCeEEEEcCce-eE-eccHHHHHHHHHhcCCceEEEEEeccCCCC
Q 044626 80 FVEVIAAYQSLEDQDWFQGNADAIRRCLWVLEEYPVTEFLILPGHH-LY-KMDYQRLIEAHRNNKADITIVALNAIRDKH 157 (429)
Q Consensus 80 ~v~i~~~~~~~~~~~~~~Gt~~al~~~~~~i~~~~~~~~lvl~gD~-i~-~~~l~~~~~~~~~~~~~~ti~~~~~~~~~~ 157 (429)
.+.+. ... .|..++++.+++.+.. .+.+++++||. +. ...+..+++.+.+.++.. +++.+.. +
T Consensus 75 ~v~~~--~~~-------~g~~~~i~~al~~~~~--~~~~lv~~~D~P~~~~~~i~~l~~~~~~~~~~~-~~~~~~~--~- 139 (236)
T 1i52_A 75 QITVV--DGG-------DERADSVLAGLKAAGD--AQWVLVHDAARPCLHQDDLARLLALSETSRTGG-ILAAPVR--D- 139 (236)
T ss_dssp TEEEE--ECC-------SSHHHHHHHHHHTSTT--CSEEEECCTTCTTCCHHHHHHHHGGGGTCSSCE-EEEEECC--S-
T ss_pred CEEEE--CCC-------CCHHHHHHHHHHhcCC--CCEEEEEcCccccCCHHHHHHHHHHHHhcCCeE-EEEEecc--c-
Confidence 13332 111 3788899999887742 37899999998 44 445788888776654233 3222321 1
Q ss_pred CCccEEEEcCC-CCEEEEEecCcccccccccCCCCCCCCCCCCCCcceeeEEEEcHHHHHHHHHhhCCCCcccccccchh
Q 044626 158 PGFGLLRVNPV-NQVIEFSMKSERETITSISGKSSRKSDSVASGNFPSMGIYLINRDTMSRLLKEYLPEATDLGSEVIPA 236 (429)
Q Consensus 158 ~~~g~v~~d~~-~~v~~~~ek~~~~~~~~~~~~~~~~~~~~~~~~~~~~Giy~~~~~~l~~~l~~~~~~~~~~~~d~l~~ 236 (429)
++...+++ |.+....+. ..-+..-+.++|+.+.|.+.++........ ..+....
T Consensus 140 ---~~~~~~~~~~~i~~~~~~---------------------~~i~~~~~p~~f~~~~l~~~~~~~~~~g~~-~td~~~~ 194 (236)
T 1i52_A 140 ---TMKRAEPGKNAIAHTVDR---------------------NGLWHALTPQFFPRELLHDCLTRALNEGAT-ITDEASA 194 (236)
T ss_dssp ---CEEEECTTSSSEEEEECC---------------------TTCEEEEEEEEEEHHHHHHHHHHHHHTTCC-CCSHHHH
T ss_pred ---cEEEEcCCCCceeeccCh---------------------HhheeeeCCceecHHHHHHHHHHHHhcCCC-cccHHHH
Confidence 11122333 454432211 111222266788887776666543111111 2222233
Q ss_pred cccCCceEEEEEecceEEecCCHHHHHHHhHhhhcc
Q 044626 237 AISIGMKVEAYLFDGYWEDMRSIEAFYHANMECIKR 272 (429)
Q Consensus 237 l~~~g~~i~~~~~~~~~~~i~t~~~~~~an~~~l~~ 272 (429)
+...+.++..++.++.|.||+||+||..++..+.++
T Consensus 195 ~~~~~~~v~~v~~~~~~~dIdtpeDl~~a~~~~~~~ 230 (236)
T 1i52_A 195 LEYCGFHPQLVEGRADNIKVTRPEDLALAEFYLTRT 230 (236)
T ss_dssp HHHTTCCCEEEECCTTCCCCCSHHHHHHHHHHHCC-
T ss_pred HHHcCCCEEEEecCccccccCCHHHHHHHHHHHHHh
Confidence 323356788888888999999999999998876543
No 41
>3q80_A 2-C-methyl-D-erythritol 4-phosphate cytidyltransf; TB structural genomics consortium, TBSGC, rossman fold; HET: CDM; 2.00A {Mycobacterium tuberculosis} SCOP: c.68.1.0 PDB: 3q7u_A* 3okr_A 2xwn_A*
Probab=99.75 E-value=7.1e-17 Score=146.76 Aligned_cols=216 Identities=15% Similarity=0.095 Sum_probs=149.4
Q ss_pred eEEEEEcCCCCCCcccccccccccccccCCcchhHHHHHHhhHhcC-CCeEEEEeecCh-hHHHHHHhccccCcccCCCC
Q 044626 2 VAAVVFGDGSESRLYPLTKRRSEGAIPLAANYRLVDAVVSNCINSN-INKIYALTQFNS-TSLNLHLSRAFSGILRGKDG 79 (429)
Q Consensus 2 m~avIla~G~gsRl~plt~~~pK~Llpi~g~~plI~~~i~~l~~~g-i~~I~Iv~~~~~-~~i~~~l~~~~~~~~~~~~~ 79 (429)
+.|||||||.|+||+ ...||+|+|++|+ |||+|+++.|.+++ +++|+|++++.. +.+.+.+.. .
T Consensus 8 ~~aIIlAaG~g~Rmg---~~~~K~l~~l~Gk-pll~~~l~~~~~~~~~~~ivVv~~~~~~~~~~~~~~~--~-------- 73 (231)
T 3q80_A 8 VVAIVPAAGSGERLA---VGVPKAFYQLDGQ-TLIERAVDGLLDSGVVDTVVVAVPADRTDEARQILGH--R-------- 73 (231)
T ss_dssp EEEEEECCCCCTTTC---SSSCGGGCEETTE-EHHHHHHHHHHHTSCCCEEEEEECGGGHHHHHHHHGG--G--------
T ss_pred eEEEEECCCCCccCC---CCCCceEEEECCe-EHHHHHHHHHHhCCCCCeEEEECChHHHHHHHHHhcC--C--------
Confidence 679999999999998 4679999999999 99999999999875 999999998765 455555543 1
Q ss_pred cEEEEeccccccccCcccCcHHHHHHHHHHhhcC-CCCeEEEEcCce-eE-eccHHHHHHHHHhcCCceEEEEEeccCCC
Q 044626 80 FVEVIAAYQSLEDQDWFQGNADAIRRCLWVLEEY-PVTEFLILPGHH-LY-KMDYQRLIEAHRNNKADITIVALNAIRDK 156 (429)
Q Consensus 80 ~v~i~~~~~~~~~~~~~~Gt~~al~~~~~~i~~~-~~~~~lvl~gD~-i~-~~~l~~~~~~~~~~~~~~ti~~~~~~~~~ 156 (429)
+.+.... .+..++++++++.+... ..+.+|++.||. +. ...+..+++.+++ +.+..+...+.. +
T Consensus 74 -v~~v~gg---------~~r~~sv~~gl~~~~~~~~~d~Vlv~~~d~Pli~~~~i~~li~~~~~-~~~~~i~~~p~~--d 140 (231)
T 3q80_A 74 -AMIVAGG---------SNRTDTVNLALTVLSGTAEPEFVLVHDAARALTPPALVARVVEALRD-GYAAVVPVLPLS--D 140 (231)
T ss_dssp -CEEEECC---------SSHHHHHHHHHGGGC---CCSEEEECCTTCTTCCHHHHHHHHHHHHT-TCSEEEEEECCS--S
T ss_pred -eEEEcCC---------CchHHHHHHHHHHhhhcCCCCEEEEEcCCcCCCCHHHHHHHHHHHhh-cCCeEEEEEecc--C
Confidence 2233211 23468899998887642 137899999999 55 5567889988875 234445544443 2
Q ss_pred CCCccEEEEcCCCCEEEEEecCcccccccccCCCCCCCCCCCCCCcceeeEEEEcHHHHHHHHHhhCCC-Ccccccccch
Q 044626 157 HPGFGLLRVNPVNQVIEFSMKSERETITSISGKSSRKSDSVASGNFPSMGIYLINRDTMSRLLKEYLPE-ATDLGSEVIP 235 (429)
Q Consensus 157 ~~~~g~v~~d~~~~v~~~~ek~~~~~~~~~~~~~~~~~~~~~~~~~~~~Giy~~~~~~l~~~l~~~~~~-~~~~~~d~l~ 235 (429)
+ +...+++|.+..+.++.. -..+.+ .+.|+.+.|.+.++....+ .....+|...
T Consensus 141 t----~~~~~~~g~v~~~~~r~~--------------------l~~~qT-Pq~F~~~~L~~a~~~~~~~n~~~~~TD~~~ 195 (231)
T 3q80_A 141 T----IKAVDANGVVLGTPERAG--------------------LRAVQT-PQGFTTDLLLRSYQRGSLDLPAAEYTDDAS 195 (231)
T ss_dssp C----EEEECTTSBEEECCCGGG--------------------EEEECS-CEEEEHHHHHHHHHHHTC-----CCSSSHH
T ss_pred C----EEEEcCCCcEEEecchhh--------------------eEEEcC-CcEEEHHHHHHHHHHHHhhcCCCCCCcHHH
Confidence 2 222466777766644311 112233 4899999988777764322 1233466666
Q ss_pred hcccCCceEEEEEecceEEecCCHHHHHHHhHhh
Q 044626 236 AAISIGMKVEAYLFDGYWEDMRSIEAFYHANMEC 269 (429)
Q Consensus 236 ~l~~~g~~i~~~~~~~~~~~i~t~~~~~~an~~~ 269 (429)
.+...|.++..++.+..++.|++|+|+..++..+
T Consensus 196 ~~~~~g~~v~~v~g~~~n~kIt~p~Dl~~ae~~l 229 (231)
T 3q80_A 196 LVEHIGGQVQVVDGDPLAFKITTKLDLLLAQAIV 229 (231)
T ss_dssp HHHHTTCCCEEEECCGGGCCCCSHHHHHHHHHHH
T ss_pred HHHHcCCcEEEEECCccccCcCCHHHHHHHHHHh
Confidence 6666688899888877889999999999987654
No 42
>2i5k_A UTP--glucose-1-phosphate uridylyltransferase; LEFT-handed beta-helix, SGC domain; 3.10A {Saccharomyces cerevisiae}
Probab=99.74 E-value=8.6e-17 Score=160.43 Aligned_cols=199 Identities=13% Similarity=0.070 Sum_probs=133.4
Q ss_pred CeEEEEEcCCCCCCcccccccccccccccC-CcchhHHHHHHhhHhc----CCC-eEEEEee-cChhHHHHHHhccccCc
Q 044626 1 SVAAVVFGDGSESRLYPLTKRRSEGAIPLA-ANYRLVDAVVSNCINS----NIN-KIYALTQ-FNSTSLNLHLSRAFSGI 73 (429)
Q Consensus 1 ~m~avIla~G~gsRl~plt~~~pK~Llpi~-g~~plI~~~i~~l~~~----gi~-~I~Iv~~-~~~~~i~~~l~~~~~~~ 73 (429)
|+.+||||||.||||+ ...||+|+||+ |+ |||+++++.+... |+. .++|+++ +..+.+++++.+... +
T Consensus 92 k~avViLAGG~GTRmg---s~~PK~l~~V~~gk-~~Le~~i~~i~~l~~~~G~~Ip~vImts~~t~e~t~~~~~~~~~-f 166 (488)
T 2i5k_A 92 KLAVLKLNGGLGTSMG---CVGPKSVIEVREGN-TFLDLSVRQIEYLNRQYDSDVPLLLMNSFNTDKDTEHLIKKYSA-N 166 (488)
T ss_dssp GEEEEEECCCBSGGGT---CCSBSTTSCCBTTB-CHHHHHHHHHHHHHHHHTCCCEEEEECCTTTHHHHHHHHGGGCS-S
T ss_pred CceEEEEcCCCcccCC---CCCCccccccCCCC-cHHHHHHHHHHHhHHhcCCCccEEEEECCCCHHHHHHHHHhccc-c
Confidence 4678999999999998 67899999999 99 9999999999876 532 3566666 778889999987322 3
Q ss_pred ccCCCCcEEEEecccc---------------c----cccCcccCcHHHHHHH-----HHHhhcCCCCeEEEEcCceeE-e
Q 044626 74 LRGKDGFVEVIAAYQS---------------L----EDQDWFQGNADAIRRC-----LWVLEEYPVTEFLILPGHHLY-K 128 (429)
Q Consensus 74 ~~~~~~~v~i~~~~~~---------------~----~~~~~~~Gt~~al~~~-----~~~i~~~~~~~~lvl~gD~i~-~ 128 (429)
+. ++.+..|. . .....|.||++++... ++.+.....++++|+++|++. .
T Consensus 167 g~------~i~~f~Q~~~P~i~~d~~~~l~~~~~~~~~~~~P~GtGga~~~L~~sg~l~~l~~~g~~~v~V~ngDnL~~~ 240 (488)
T 2i5k_A 167 RI------RIRSFNQSRFPRVYKDSLLPVPTEYDSPLDAWYPPGHGDLFESLHVSGELDALIAQGREILFVSNGDNLGAT 240 (488)
T ss_dssp SC------EEEEECCCCEECEETTTCCBSCSSSSSCTTSEECCCGGGHHHHHHHHTHHHHHHHTTCCEEEEECTTBSSCC
T ss_pred Cc------eEEEEEeCccceEccccceeeccCCCCCceeeecCCCchhhhhhhhcCcHHHHHhcCCCEEEEEeCCcCCCc
Confidence 33 23333332 0 0011368999999843 455532234899999999966 4
Q ss_pred ccHHHHHHHHHhcCCceEEEEEeccCCCCC-CccEEEEcCCCCEEEEEecCcccccccccCCCCCCCCCCCCCCcceeeE
Q 044626 129 MDYQRLIEAHRNNKADITIVALNAIRDKHP-GFGLLRVNPVNQVIEFSMKSERETITSISGKSSRKSDSVASGNFPSMGI 207 (429)
Q Consensus 129 ~~l~~~~~~~~~~~~~~ti~~~~~~~~~~~-~~g~v~~d~~~~v~~~~ek~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi 207 (429)
.++. ++.+|..+++++++.+.... ++. .||.+..+ +|+ ..+.|-.+.+....-..+ ....-...++|+
T Consensus 241 ~d~~-~L~~~~~~~a~~t~~v~~~~--~p~~~yG~Iv~~-dG~-~~iVE~~e~~~e~~~~~~------~~~~~~~~Ntgi 309 (488)
T 2i5k_A 241 VDLK-ILNHMIETGAEYIMELTDKT--RADVKGGTLISY-DGQ-VRLLEVAQVPKEHIDEFK------NIRKFTNFNTNN 309 (488)
T ss_dssp CCHH-HHHHHHHSCCSEEEEEEECC--GGGSSSCEEEEE-TTE-EEEECGGGSCTTSHHHHT------CTTTCCEEEEEE
T ss_pred ccHH-HHHHHHhcCCcEEEEEEEec--CCCCceeEEEEE-CCc-EEEEEeccCCHHHHhhcc------cccccCEEEEEE
Confidence 5775 66889899999988766542 454 48987664 565 444442221110000000 001234679999
Q ss_pred EEEcHHHHHHHHHh
Q 044626 208 YLINRDTMSRLLKE 221 (429)
Q Consensus 208 y~~~~~~l~~~l~~ 221 (429)
|+|+.+.|+++++.
T Consensus 310 ~~f~~~~L~~~l~~ 323 (488)
T 2i5k_A 310 LWINLKAVKRLIES 323 (488)
T ss_dssp EEEEHHHHHHHHHT
T ss_pred EEEeHHHHHHHHhh
Confidence 99999999988885
No 43
>1vpa_A 2-C-methyl-D-erythritol 4-phosphate cytidylyltran; TM1393, JCSG, joint center for structural GENO PSI, protein structure initiative; HET: CTP; 2.67A {Thermotoga maritima} SCOP: c.68.1.13
Probab=99.74 E-value=4.6e-17 Score=148.74 Aligned_cols=212 Identities=13% Similarity=0.165 Sum_probs=135.5
Q ss_pred eEEEEEcCCCCCCcccccccccccccccCCcchhHHHHHHhhHhcC-CCeEEEEeecChhHH-HHHHhccccCcccCCCC
Q 044626 2 VAAVVFGDGSESRLYPLTKRRSEGAIPLAANYRLVDAVVSNCINSN-INKIYALTQFNSTSL-NLHLSRAFSGILRGKDG 79 (429)
Q Consensus 2 m~avIla~G~gsRl~plt~~~pK~Llpi~g~~plI~~~i~~l~~~g-i~~I~Iv~~~~~~~i-~~~l~~~~~~~~~~~~~ 79 (429)
|.|||||||.|+||+ ...||+|+|++|+ |||+|+++.|..++ +++|+|+++++.... .+++. +..
T Consensus 14 ~~aiILAaG~s~Rm~---~~~~K~l~~i~Gk-pli~~~i~~l~~~~~~~~ivVv~~~~~~~~~~~~~~-----~~~---- 80 (234)
T 1vpa_A 14 NVAILLAAGKGERMS---ENVPKQFLEIEGR-MLFEYPLSTFLKSEAIDGVVIVTRREWFEVVEKRVF-----HEK---- 80 (234)
T ss_dssp EEEEEEECCCCGGGC---CSSCGGGCEETTE-ETTHHHHHHHHHCTTCSEEEEEECGGGHHHHHTTCC-----CTT----
T ss_pred CeEEEEcCcchhhcC---CCCCceEEEECCe-EHHHHHHHHHHcCCCCCeEEEEEChHHHHHHHHHhc-----cCC----
Confidence 679999999999998 3469999999999 99999999999988 999999998765433 33221 110
Q ss_pred cEEEEeccccccccCcccCcHHHHHHHHHHhhcCCCCeEEEEcCce-eE-eccHHHHHHHHHhcCCceEEEEEeccCCCC
Q 044626 80 FVEVIAAYQSLEDQDWFQGNADAIRRCLWVLEEYPVTEFLILPGHH-LY-KMDYQRLIEAHRNNKADITIVALNAIRDKH 157 (429)
Q Consensus 80 ~v~i~~~~~~~~~~~~~~Gt~~al~~~~~~i~~~~~~~~lvl~gD~-i~-~~~l~~~~~~~~~~~~~~ti~~~~~~~~~~ 157 (429)
.+.. ... . .+..++++.+++.+.....+.+++++||. +. ...+..+++.+...++ .+++.+.. +
T Consensus 81 ~~~~--~~g---g----~~~~~sv~~al~~~~~~~~~~vlv~~~D~Pli~~~~i~~l~~~~~~~~~--~i~~~~~~--~- 146 (234)
T 1vpa_A 81 VLGI--VEG---G----DTRSQSVRSALEFLEKFSPSYVLVHDSARPFLRKKHVSEVLRRARETGA--ATLALKNS--D- 146 (234)
T ss_dssp EEEE--EEC---C----SSHHHHHHHHHHHHGGGCCSEEEEEETTSCCCCHHHHHHHHHHHHHHSE--EEEEEECC--S-
T ss_pred ceEE--eCC---C----CcHHHHHHHHHHHhhhcCCCEEEEecCcccCCCHHHHHHHHHHHHhcCC--EEEEEecC--C-
Confidence 1111 110 0 23678899988887431126788889998 55 5567889988876543 23222321 1
Q ss_pred CCccEEEEcCCCCEEEEEecCcccccccccCCCCCCCCCCCCCCcceeeEEEEcHHHHHHHHHhhCCCCcccccccchhc
Q 044626 158 PGFGLLRVNPVNQVIEFSMKSERETITSISGKSSRKSDSVASGNFPSMGIYLINRDTMSRLLKEYLPEATDLGSEVIPAA 237 (429)
Q Consensus 158 ~~~g~v~~d~~~~v~~~~ek~~~~~~~~~~~~~~~~~~~~~~~~~~~~Giy~~~~~~l~~~l~~~~~~~~~~~~d~l~~l 237 (429)
++..++++| + .+.++.. -+..-...+|+++.|.++++.. ....+....+
T Consensus 147 ---~~~~~~~~g-v-~~~~r~~---------------------~~~~~~p~~f~~~~l~~~~~~~-----~~~~~~~~~~ 195 (234)
T 1vpa_A 147 ---ALVRVENDR-I-EYIPRKG---------------------VYRILTPQAFSYEILKKAHENG-----GEWADDTEPV 195 (234)
T ss_dssp ---EEEEEETTE-E-EEECCTT---------------------EEEEEEEEEEEHHHHHHHHTTC-----CCCSSSHHHH
T ss_pred ---cEEEECCCC-c-ccCChhH---------------------eeeecCCccccHHHHHHHHHhc-----CCCCcHHHHH
Confidence 122335556 5 4443210 0111234588888887665431 1122222222
Q ss_pred ccCCceEEEEEecceEEecCCHHHHHHHhHhhhc
Q 044626 238 ISIGMKVEAYLFDGYWEDMRSIEAFYHANMECIK 271 (429)
Q Consensus 238 ~~~g~~i~~~~~~~~~~~i~t~~~~~~an~~~l~ 271 (429)
...+.++..++.++.|.||+||+||..++..+.+
T Consensus 196 ~~~g~~v~~v~~~~~~~dIdtpeDl~~a~~~l~~ 229 (234)
T 1vpa_A 196 QKLGVKIALVEGDPLCFKVTFKEDLELARIIARE 229 (234)
T ss_dssp HTTTCCCEEEECCGGGCCCCSTTHHHHHHHHHHH
T ss_pred HHcCCcEEEEECCchhcCCCCHHHHHHHHHHHhc
Confidence 2335667777777789999999999999876544
No 44
>1qwj_A Cytidine monophospho-N-acetylneuraminic acid synthetase; CMP-5-N-acetylneuraminic acid synthetase, CMP-NEU5AC, sialic acid, glycosylation; HET: NCC; 2.80A {Mus musculus} SCOP: c.68.1.13
Probab=99.74 E-value=1.3e-17 Score=151.89 Aligned_cols=217 Identities=14% Similarity=0.118 Sum_probs=135.0
Q ss_pred CeEEEEEcCCCCCCcccccccccccccccCCcchhHHHHHHhhHhcC-CCeEEEEeecChhHHHHHHhccccCcccCCCC
Q 044626 1 SVAAVVFGDGSESRLYPLTKRRSEGAIPLAANYRLVDAVVSNCINSN-INKIYALTQFNSTSLNLHLSRAFSGILRGKDG 79 (429)
Q Consensus 1 ~m~avIla~G~gsRl~plt~~~pK~Llpi~g~~plI~~~i~~l~~~g-i~~I~Iv~~~~~~~i~~~l~~~~~~~~~~~~~ 79 (429)
++.|||||||.|+||. +|+|+|++|+ |||+|+++.+.+++ +++|+|++. .+.+.+++.+ ++.
T Consensus 3 ~~~aiIlA~G~s~R~~------~K~l~~i~Gk-pli~~~i~~~~~~~~~~~ivv~~~--~~~i~~~~~~----~g~---- 65 (229)
T 1qwj_A 3 HLAALVLARGGSKGIP------LKNIKRLAGV-PLIGWVLRAALDAGVFQSVWVSTD--HDEIENVAKQ----FGA---- 65 (229)
T ss_dssp CEEEEEECCSCCSSSS------CTTTSEETTE-EHHHHHHHHHHHHTCCSEEEEEES--CHHHHHHHHH----TTC----
T ss_pred cEEEEEEcCCCCCCCC------CcccceECCE-EHHHHHHHHHHhCCCcCEEEEECC--hHHHHHHHHH----cCC----
Confidence 4679999999999996 5999999999 99999999999998 699998883 4567777654 222
Q ss_pred cEEEEeccccccccCcccCcHHHHHHHHHHhhcCCCCeEEEEcCce-eE-eccHHHHHHHHHhcCCceEEEEEeccCCCC
Q 044626 80 FVEVIAAYQSLEDQDWFQGNADAIRRCLWVLEEYPVTEFLILPGHH-LY-KMDYQRLIEAHRNNKADITIVALNAIRDKH 157 (429)
Q Consensus 80 ~v~i~~~~~~~~~~~~~~Gt~~al~~~~~~i~~~~~~~~lvl~gD~-i~-~~~l~~~~~~~~~~~~~~ti~~~~~~~~~~ 157 (429)
++...... ...+ ..+..++++.+++.+. ..+.+++++||. +. ...+..+++.|.+.+++.++.+... .+|
T Consensus 66 --~~~~~~~~-~~~~-~~~~~~~v~~al~~~~--~~d~vlv~~~D~Pli~~~~i~~l~~~~~~~~~~~~~~~~~~--~~p 137 (229)
T 1qwj_A 66 --QVHRRSSE-TSKD-SSTSLDAIVEFLNYHN--EVDIVGNIQATSPCLHPTDLQKVAEMIREEGYDSVFSVVRR--HQF 137 (229)
T ss_dssp --EEEECCGG-GSST-TCCHHHHHHHHHTTCT--TCSEEEEECTTCTTCCHHHHHHHHHHHHSSCCSEEEEEEEE--CCC
T ss_pred --EEEeChhh-hcCC-CCcHHHHHHHHHHhcC--CCCEEEEecCCCCcCCHHHHHHHHHHHHhCCCCEEEEEeec--cCh
Confidence 23211100 0001 1244478888887763 237899999999 44 5678999999988777655444322 233
Q ss_pred CCccEEEEcCCCCEEEEEecCcccccccccCCCCCCCCCCCCCCcceeeEEEEcHHHHHHHHHhhCCCCcccccccchhc
Q 044626 158 PGFGLLRVNPVNQVIEFSMKSERETITSISGKSSRKSDSVASGNFPSMGIYLINRDTMSRLLKEYLPEATDLGSEVIPAA 237 (429)
Q Consensus 158 ~~~g~v~~d~~~~v~~~~ek~~~~~~~~~~~~~~~~~~~~~~~~~~~~Giy~~~~~~l~~~l~~~~~~~~~~~~d~l~~l 237 (429)
..+++ .+ + +..+.++..... ..++. .+. ....+..++|+|+|+++.| +. .
T Consensus 138 ~~~~v--~~--~-~~~~~~~~~~~~---~~~~~--~~~-~~~~~~~n~giY~~~~~~l---~~---------------~- 187 (229)
T 1qwj_A 138 RWSEI--QK--G-VREVTEPLNLNP---AKRPR--RQD-WDGELYENGSFYFAKRHLI---EM---------------G- 187 (229)
T ss_dssp EECCC--CS--S-TTCCCCBSSSBT---TBCCC--TTT-SCCEEEEEEEEEEEEHHHH---HT---------------T-
T ss_pred hHhhc--cc--c-cccccccccccc---ccccC--CCC-CCceEEEeeEEEEEEHHHh---cc---------------c-
Confidence 33322 12 2 111221110000 00000 000 0023467999999999887 11 1
Q ss_pred ccCCceEEEEEec-ceEEecCCHHHHHHHhHhhhcc
Q 044626 238 ISIGMKVEAYLFD-GYWEDMRSIEAFYHANMECIKR 272 (429)
Q Consensus 238 ~~~g~~i~~~~~~-~~~~~i~t~~~~~~an~~~l~~ 272 (429)
+..|..+..+..+ ++|.||+||+||..++..+.+.
T Consensus 188 ~~~g~~~~~~~~~~~~~~dIdt~~Dl~~a~~~~~~~ 223 (229)
T 1qwj_A 188 YLQGGKMAYYEMRAEHSVDIDVDIDWPIAEQRVLRF 223 (229)
T ss_dssp CSSCSSEEEEECCGGGCCCHHHHCSHHHHHHHHHHH
T ss_pred cccCCeEEEEECCcccccCCCCHHHHHHHHHHHHHh
Confidence 1224455432444 6899999999999998876543
No 45
>2px7_A 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; TTHA0171, ISPD_THET8, ISPD, structural genomics PSI; 2.20A {Thermus thermophilus HB8}
Probab=99.72 E-value=4e-17 Score=149.46 Aligned_cols=206 Identities=9% Similarity=-0.041 Sum_probs=125.7
Q ss_pred eEEEEEcCCCCCCcccccccccccccccCCcchhHHHHHHhhHhcCCCeEEEEeecChhHHHHHHhccccCcccCCCCcE
Q 044626 2 VAAVVFGDGSESRLYPLTKRRSEGAIPLAANYRLVDAVVSNCINSNINKIYALTQFNSTSLNLHLSRAFSGILRGKDGFV 81 (429)
Q Consensus 2 m~avIla~G~gsRl~plt~~~pK~Llpi~g~~plI~~~i~~l~~~gi~~I~Iv~~~~~~~i~~~l~~~~~~~~~~~~~~v 81 (429)
+.|||||||.|+||++ . ||+|+|++|+ |||+|+++. ..++++|+|++++. +.+ +.. ..+
T Consensus 26 ~~aiILAgG~s~Rm~~---~-~K~l~~i~gk-pli~~~l~~--~~~~~~ivvv~~~~---~~~-~~~----------~~v 84 (236)
T 2px7_A 26 VSVLIPAAGNGLRLGR---G-PKAFLQVGGR-TLLEWTLAA--FRDAAEVLVALPPG---AEP-PKG----------LGA 84 (236)
T ss_dssp CEEEEECCC----------C-CGGGCBCSSS-BHHHHHHHH--TTTCSEEEEEECTT---CCC-CTT----------CSC
T ss_pred eEEEEEcCCCCccCCC---C-CCeEEEECCE-EHHHHHHHh--cCCCCeEEEEeCHH---HHH-hhc----------CCc
Confidence 3499999999999984 3 9999999999 999999999 66899999999751 111 111 012
Q ss_pred EEEeccccccccCcccCcHHHHHHHHHHhhcCCCCeEEEEcCce-eE-eccHHHHHHHHHhcCCceEEEEEeccCCCCCC
Q 044626 82 EVIAAYQSLEDQDWFQGNADAIRRCLWVLEEYPVTEFLILPGHH-LY-KMDYQRLIEAHRNNKADITIVALNAIRDKHPG 159 (429)
Q Consensus 82 ~i~~~~~~~~~~~~~~Gt~~al~~~~~~i~~~~~~~~lvl~gD~-i~-~~~l~~~~~~~~~~~~~~ti~~~~~~~~~~~~ 159 (429)
++.. . ..|..++++.+++.+. .+.+++++||. +. ...+..+++.+.+.++ .+.+.+.. ++
T Consensus 85 ~~~~--~-------~~~~~~~i~~al~~~~---~~~vlv~~~D~P~~~~~~i~~l~~~~~~~~~--~i~~~~~~--~~-- 146 (236)
T 2px7_A 85 VFLE--G-------GATRQASVARLLEAAS---LPLVLVHDVARPFVSRGLVARVLEAAQRSGA--AVPVLPVP--DT-- 146 (236)
T ss_dssp EEEE--C-------CSSHHHHHHHHHHHCC---SSEEEECCTTCCCCCHHHHHHHHHHHHHHSE--EEEEEECC--SE--
T ss_pred EEEe--C-------CCchHHHHHHHHHHcC---CCeEEEecCccccCCHHHHHHHHHHHHhcCC--eEEEEecC--Cc--
Confidence 2321 1 1367889999988775 37899999998 54 4557889988876543 23222321 11
Q ss_pred ccEEEEcCCCCEEEEEecCcccccccccCCCCCCCCCCCCCCcceeeEEEEcHHHHHHHHHhhCCCCcccccccchhccc
Q 044626 160 FGLLRVNPVNQVIEFSMKSERETITSISGKSSRKSDSVASGNFPSMGIYLINRDTMSRLLKEYLPEATDLGSEVIPAAIS 239 (429)
Q Consensus 160 ~g~v~~d~~~~v~~~~ek~~~~~~~~~~~~~~~~~~~~~~~~~~~~Giy~~~~~~l~~~l~~~~~~~~~~~~d~l~~l~~ 239 (429)
....+ +|++..+.++.. .+.....++|+++.|.++++...... ....+....+..
T Consensus 147 --~~~~~-~G~v~~~~~~~~---------------------~~~~~~~~~f~~~~l~~~~~~~~~~g-~~~~d~~~ll~~ 201 (236)
T 2px7_A 147 --LMAPE-GEAYGRVVPREA---------------------FRLVQTPQGFFTALLREAHAYARRKG-LEASDDAQLVQA 201 (236)
T ss_dssp --EEEEC-SSSCEEEECGGG---------------------CEEECSCEEEEHHHHHHHHHHHHHHT-CCCSSHHHHHHH
T ss_pred --EEEec-CCeEEecCChHh---------------------hccccCCeEEcHHHHHHHHHHHHhcC-CCchhHHHHHHH
Confidence 11123 677765544311 01111356788887765655321111 112232222223
Q ss_pred CCceEEEEEecceEEecCCHHHHHHHhHhhhc
Q 044626 240 IGMKVEAYLFDGYWEDMRSIEAFYHANMECIK 271 (429)
Q Consensus 240 ~g~~i~~~~~~~~~~~i~t~~~~~~an~~~l~ 271 (429)
.+.++..+..++.|.||+||+||..++..+.+
T Consensus 202 ~~~~v~~v~~~~~~~dIdtpeDl~~a~~~l~~ 233 (236)
T 2px7_A 202 LGYPVALVEGEATAFKITHPQDLVLAEALARV 233 (236)
T ss_dssp TTCCCEEEECCTTCCCCCSHHHHHHHHHHHTC
T ss_pred cCCcEEEEECCccccCCCCHHHHHHHHHHHHh
Confidence 35678888888899999999999999776543
No 46
>2waw_A MOBA relate protein; unknown function; HET: PGE; 1.60A {Mycobacterium SP}
Probab=99.72 E-value=1.3e-16 Score=141.85 Aligned_cols=189 Identities=13% Similarity=0.142 Sum_probs=128.1
Q ss_pred CeEEEEEcCCCCCCcccccccccccccccCCcchhHHHHHHhhHhcCCCeEEEEeecChhHHHHHHhccccCcccCCCCc
Q 044626 1 SVAAVVFGDGSESRLYPLTKRRSEGAIPLAANYRLVDAVVSNCINSNINKIYALTQFNSTSLNLHLSRAFSGILRGKDGF 80 (429)
Q Consensus 1 ~m~avIla~G~gsRl~plt~~~pK~Llpi~g~~plI~~~i~~l~~~gi~~I~Iv~~~~~~~i~~~l~~~~~~~~~~~~~~ 80 (429)
+|.|||||||.|+||+ .||+|+|++|+ |||+|+++.+..+++++|+|+++++.+++.+++.+ .+
T Consensus 5 ~~~~iIlA~G~~~R~g-----~~K~l~~~~g~-pli~~~l~~l~~~~~~~i~vv~~~~~~~~~~~~~~----~~------ 68 (199)
T 2waw_A 5 RVTGVVLAAGYSRRLG-----TPKQLLPLGDT-TLLGATLAMARRCPFDQLIVTLGGAADEVLEKVEL----DG------ 68 (199)
T ss_dssp CEEEEEEESSCCTTTT-----SCGGGCEETTE-EHHHHHHHHHHTSSCSEEEEEECTTHHHHHHHSCC----TT------
T ss_pred ceEEEEECCCCCCCCC-----CCEEeCEeCcc-CHHHHHHHHHHhCCCCcEEEEeCCCHHHHHHHhcc----CC------
Confidence 4789999999999997 69999999999 99999999999999999999998877777776654 12
Q ss_pred EEEEeccccccccCcccCcHHHHHHHHHHhhcCCCCeEEEEcCcee-E-eccHHHHHHHHHhcCCceEEEEEeccCCCCC
Q 044626 81 VEVIAAYQSLEDQDWFQGNADAIRRCLWVLEEYPVTEFLILPGHHL-Y-KMDYQRLIEAHRNNKADITIVALNAIRDKHP 158 (429)
Q Consensus 81 v~i~~~~~~~~~~~~~~Gt~~al~~~~~~i~~~~~~~~lvl~gD~i-~-~~~l~~~~~~~~~~~~~~ti~~~~~~~~~~~ 158 (429)
+.++.. +. +..|++++++.+++.+.. ..+.+++++||.. . ...+..+++. +.++++++...
T Consensus 69 ~~~~~~-~~-----~~~g~~~~i~~al~~~~~-~~~~vlv~~~D~P~~~~~~i~~l~~~--~~~~~~~~~~~-------- 131 (199)
T 2waw_A 69 LDIVLV-DD-----AGLGCSSSLKSALTWVDP-TAEGIVLMLGDQPGITASAVASLIAG--GRGATIAVCEY-------- 131 (199)
T ss_dssp SEEEEC-CC-----CCTTCCCHHHHHHHTSCT-TCSEEEEEETTCTTCCHHHHHHHHHH--HTTCSEEEEEE--------
T ss_pred CEEEEC-CC-----cccCHHHHHHHHHHhhhc-cCCeEEEEeCCcccCCHHHHHHHHhh--cCCCCEEEEec--------
Confidence 223321 11 236888999999988731 1388999999993 3 6667888877 34444332110
Q ss_pred CccEEEEcCCCCEEEEEecCcccccccccCCCCCCCCCCCCCCcceeeEEEEcHHHHHHHHHhhCCCCcccccccchhcc
Q 044626 159 GFGLLRVNPVNQVIEFSMKSERETITSISGKSSRKSDSVASGNFPSMGIYLINRDTMSRLLKEYLPEATDLGSEVIPAAI 238 (429)
Q Consensus 159 ~~g~v~~d~~~~v~~~~ek~~~~~~~~~~~~~~~~~~~~~~~~~~~~Giy~~~~~~l~~~l~~~~~~~~~~~~d~l~~l~ 238 (429)
+++ +. .-++|+++.|..+.+ . ..... ...++.
T Consensus 132 ---------~g~-------~~--------------------------~P~~~~~~~l~~~~~-~-~~~~~-~~~~l~--- 163 (199)
T 2waw_A 132 ---------ANG-------IG--------------------------HPFWVSRGVFGDLAE-L-HGDKG-VWRLIE--- 163 (199)
T ss_dssp ---------TTE-------EE--------------------------EEEEEEGGGHHHHHT-C-SSTTC-HHHHHH---
T ss_pred ---------CCc-------cc--------------------------CCEEEcHHHHHHHHh-c-CCCHH-HHHHHH---
Confidence 010 00 013677777764442 1 11110 112222
Q ss_pred cCCceEEEEEe-cceEEecCCHHHHHHHhHhhh
Q 044626 239 SIGMKVEAYLF-DGYWEDMRSIEAFYHANMECI 270 (429)
Q Consensus 239 ~~g~~i~~~~~-~~~~~~i~t~~~~~~an~~~l 270 (429)
+.+.++..++. ++.|.||+||+||..++..+.
T Consensus 164 ~~~~~v~~~~~~~~~~~dIdtpeDl~~~~~~~~ 196 (199)
T 2waw_A 164 SGRHGVRRIRVDADVPLDVDTWDDYERLLASVV 196 (199)
T ss_dssp SSSSCEEEEECSSCCCCCCSSHHHHHHHHHHHH
T ss_pred hCcccEEEEEcCcccccCCCCHHHHHHHHHHHh
Confidence 22356777776 458999999999999877643
No 47
>3rsb_A Adenosylcobinamide-phosphate guanylyltransferase; pyrophosphorylase binding motif, pyrophosphorylase; HET: GTP; 2.80A {Methanocaldococcus jannaschii}
Probab=99.71 E-value=2.1e-17 Score=146.76 Aligned_cols=128 Identities=20% Similarity=0.286 Sum_probs=92.1
Q ss_pred eEEEEEcCCCCCCcccccccccccccccCCcchhHHHHHHhhHhcCCCeEEEEeecChhHHHHHHhccccCcccCCCCcE
Q 044626 2 VAAVVFGDGSESRLYPLTKRRSEGAIPLAANYRLVDAVVSNCINSNINKIYALTQFNSTSLNLHLSRAFSGILRGKDGFV 81 (429)
Q Consensus 2 m~avIla~G~gsRl~plt~~~pK~Llpi~g~~plI~~~i~~l~~~gi~~I~Iv~~~~~~~i~~~l~~~~~~~~~~~~~~v 81 (429)
|+|||||||.|+||+| .||+|+|++|+ |||+|+++.+.++++++|+|+++++.+.+.+++.+.+. +.. .+
T Consensus 1 m~aiIlA~G~s~R~~~----~~K~l~~~~g~-pli~~~l~~l~~~~~~~v~vv~~~~~~~i~~~~~~~~~-~~~----~~ 70 (196)
T 3rsb_A 1 MDALIMAGGKGTRMGG----VEKPLIKLCGR-CLIDYVVSPLLKSKVNNIFIATSPNTPKTKEYINSAYK-DYK----NI 70 (196)
T ss_dssp CEEEEEC----CGGGG----SCGGGCEETTE-EHHHHHHHHHHSSSCCCEEEECCTTCHHHHHHHHHHTT-TTT----EE
T ss_pred CEEEEECCCCCCcCCC----CCccEEEECCE-EHHHHHHHHHHHCCCCEEEEEeCCChHHHHHHHHhhcc-CCC----CE
Confidence 7899999999999997 79999999999 99999999999999999999999888888888877433 110 12
Q ss_pred EEEeccccccccCcccCcHHHHHHHHHHhhcCCCCeEEEEcCce--eEeccHHHHHHHHHh-----cCCceEEEEEe
Q 044626 82 EVIAAYQSLEDQDWFQGNADAIRRCLWVLEEYPVTEFLILPGHH--LYKMDYQRLIEAHRN-----NKADITIVALN 151 (429)
Q Consensus 82 ~i~~~~~~~~~~~~~~Gt~~al~~~~~~i~~~~~~~~lvl~gD~--i~~~~l~~~~~~~~~-----~~~~~ti~~~~ 151 (429)
.++ ... ..|++++++.+++.+ .+.+++++||. +....+..+++.|.+ .+.+..+++.+
T Consensus 71 ~~~--~~~------~~g~~~si~~al~~~----~~~vlv~~~D~P~i~~~~i~~l~~~~~~~~~~~~~~~~~~~~~p 135 (196)
T 3rsb_A 71 VVI--DTS------GKGYIEDLNECIGYF----SEPFLVVSSDLINLKSKIINSIVDYFYCIKAKTPDVEALAVMIP 135 (196)
T ss_dssp EE----------------CCCCCTTTTTC----SSCEEEEETTEESCCHHHHHHHHHHHHHHHTTCC--CEEEEEEE
T ss_pred EEE--ECC------CCCcHHHHHHHHHhC----CCCEEEEeCCcccCCHHHHHHHHHHHHhhhcccCCCceEEEEEE
Confidence 222 111 257777888887666 28999999999 346778999999986 55555554444
No 48
>2wee_A MOBA-related protein; unknown function; 1.65A {Mycobacterium tuberculosis H37RV} PDB: 2we9_A 2yes_A
Probab=99.71 E-value=6.5e-17 Score=143.60 Aligned_cols=113 Identities=15% Similarity=0.257 Sum_probs=88.0
Q ss_pred eEEEEEcCCCCCCcccccccccccccccCCcchhHHHHHHhhHhcCCCeEEEEeecChhHHHHHHhccccCcccCCCCcE
Q 044626 2 VAAVVFGDGSESRLYPLTKRRSEGAIPLAANYRLVDAVVSNCINSNINKIYALTQFNSTSLNLHLSRAFSGILRGKDGFV 81 (429)
Q Consensus 2 m~avIla~G~gsRl~plt~~~pK~Llpi~g~~plI~~~i~~l~~~gi~~I~Iv~~~~~~~i~~~l~~~~~~~~~~~~~~v 81 (429)
|.+||||||.|+||+ .||+|+|++|+ |||+|+++.+..+++++|+|++++..+.+.+++.+ .+ +
T Consensus 6 ~~~iIlA~G~~~R~g-----~~K~l~~~~g~-pll~~~l~~l~~~~~~~i~vv~~~~~~~~~~~~~~----~~------~ 69 (197)
T 2wee_A 6 ITGVVLAAGRSNRLG-----TPKQLLPYRDT-TVLGATLDVARQAGFDQLILTLGGAASAVRAAMAL----DG------T 69 (197)
T ss_dssp EEEEEEECCCCTTTS-----SCGGGSEETTE-EHHHHHHHHHHHTTCSEEEEEECTTHHHHHHHSCC----TT------S
T ss_pred eEEEEECCCCcccCC-----CCeEcCeeCCc-cHHHHHHHHHHhcCCCcEEEEeCCCHHHHHHHhcc----CC------C
Confidence 679999999999996 69999999999 99999999999999999999999887777776654 12 2
Q ss_pred EEEeccccccccCcccCcHHHHHHHHHHhhcCCCCeEEEEcCce-eE-eccHHHHHHH
Q 044626 82 EVIAAYQSLEDQDWFQGNADAIRRCLWVLEEYPVTEFLILPGHH-LY-KMDYQRLIEA 137 (429)
Q Consensus 82 ~i~~~~~~~~~~~~~~Gt~~al~~~~~~i~~~~~~~~lvl~gD~-i~-~~~l~~~~~~ 137 (429)
.++.. + .+..|++++++.+++.+.. ..+.+++++||. +. ...+..+++.
T Consensus 70 ~~~~~-~-----~~~~g~~~~i~~al~~~~~-~~~~vlv~~~D~P~~~~~~i~~l~~~ 120 (197)
T 2wee_A 70 DVVVV-E-----DVERGCAASLRVALARVHP-RATGIVLMLGDQPQVAPATLRRIIDV 120 (197)
T ss_dssp EEEEC-C---------CCHHHHHHHHTTSCT-TEEEEEEEETTCTTCCHHHHHHHHHH
T ss_pred EEEEC-C-----CcccCHHHHHHHHHHHhcc-cCCeEEEEeCCcCCCCHHHHHHHHhh
Confidence 23321 1 1236999999999887731 137899999999 44 5667888877
No 49
>3eh0_A UDP-3-O-[3-hydroxymyristoyl] glucosamine N- acyltransferase; LPXD, LEFT-handed parallel beta helix, acyl carrier protein, antibiotic resistance; 2.60A {Escherichia coli}
Probab=99.64 E-value=3.8e-15 Score=143.50 Aligned_cols=175 Identities=17% Similarity=0.152 Sum_probs=91.9
Q ss_pred EecCCHHHHHHHhHhhhcccCCCcceeCCCCceecCCccCCCeEE-eeeEe-eCeEECCCcEEcc-eEe-eCcEEcCCcE
Q 044626 254 EDMRSIEAFYHANMECIKRSNMRYNFYDRDCPVYTMPRCLPPTMI-REAVI-RDSVVGDGCIINR-CKI-KGTVIGMRTR 329 (429)
Q Consensus 254 ~~i~t~~~~~~an~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~~i-~~~~i-~~~~ig~~~~i~~-~~v-~~~~ig~~~~ 329 (429)
+-+.+|...+.....++.+...+.+.+++++.+.+++.+++++.| +++.| .++.||++|+|++ +.+ .++.||++|.
T Consensus 74 ~~~~~p~~~~~~~~~~~~~~~~~~~~i~~~a~i~~~a~ig~~~~I~~~~~I~~~v~IG~~~~I~~~~~Ig~~~~IG~~~~ 153 (341)
T 3eh0_A 74 LVVKNPYLTYARMAQILDTTPQPAQNIAPSAVIDATAKLGNNVSIGANAVIESGVELGDNVIIGAGCFVGKNSKIGAGSR 153 (341)
T ss_dssp EECSCHHHHHHHHHHHHCCCCCSCCSBCTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCE
T ss_pred EEeCCHHHHHHHHHHHhcccCCccCccCCCcEECCCcEECCCCEECCCcEECCCcEECCCcEECCCcEECCCCEECCCcE
Confidence 446778776666566665443344455666665555555555555 34444 2555555555555 444 3455554444
Q ss_pred ECCCCEEecCeEECC-cccccccccc-----------cCCccccCC----c----------------ceeEeCCCCee-c
Q 044626 330 IGDGAVIEDSVIMGA-DFYQQGEDIQ-----------SSGKCINHK----A----------------IPVGIGEDTQI-K 376 (429)
Q Consensus 330 ig~~~~i~~~~~~~~-~~~~~~~~~~-----------~~~~~~~~~----~----------------~~~~ig~~~~i-~ 376 (429)
|+++++|...+.+++ ..++.+..+. .+.++++.+ + ..+.||+++.| .
T Consensus 154 I~~~~~I~~~~~IG~~~~I~~g~~I~~~~fg~~~~~~~~~~i~~~g~v~IGd~v~Ig~~~~I~~~~~~~~~Ig~~~~I~~ 233 (341)
T 3eh0_A 154 LWANVTIYHEIQIGQNCLIQSGTVVGADGFGYANDRGNWVKIPQIGRVIIGDRVEIGACTTIDRGALDDTIIGNGVIIDN 233 (341)
T ss_dssp ECSSCEECTTCEECSSCEECTTCEEEECCSCEEEETTEEEECCCCCCEEECSSCEECTTCEEECCSSSCEEECTTCEECT
T ss_pred ECCCcEECCCCEECCccEEcCCcEECCccccccccCCccccccccCcEEECCCcEECCccEeeccccCceEeccceEECC
Confidence 444444422222222 1111111110 000111100 0 01344444444 4
Q ss_pred ceEEecCcEECCCcEEecCCCCCCCeeecCCeEEccCE-----EEEcCCCEeCCCcc
Q 044626 377 KAVIDKNARIGKNVLIINKDGVQEGDREANGYIISEGI-----VVIIHGAEIADGSI 428 (429)
Q Consensus 377 ~~~ig~~~~ig~~~~i~~~~~~~~~~~~~~~~~i~~~~-----~~i~~~~~i~~~~v 428 (429)
++.|+++|.||++|.|+.+..+.++.++|++++|++++ +.|+++++|+++++
T Consensus 234 ~v~I~~~v~IG~~~~i~~~~~i~g~v~IG~~~~Ig~~s~V~~~v~Ig~~~vv~a~s~ 290 (341)
T 3eh0_A 234 QCQIAHNVVIGDNTAVAGGVIMAGSLKIGRYCMIGGASVINGHMEICDKVTVTGMGM 290 (341)
T ss_dssp TCEECTTCEECTTCEECTTCEECTTEEECTTCEECTTCEECSSEEECSSEEECTTCE
T ss_pred CCEEeCCcEECCCCEECCCCEECCCcEECCCcEEcCCCEECCCCEECCCCEEeeCCE
Confidence 55667788888888888888888888888888888773 45555666666654
No 50
>3pmo_A UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltr; lipid A biosynthesis pathway, transferase; 1.30A {Pseudomonas aeruginosa}
Probab=99.64 E-value=3.7e-15 Score=144.93 Aligned_cols=60 Identities=20% Similarity=0.368 Sum_probs=41.0
Q ss_pred eEeCCCCee-cceEEecCcEECCCcEEecCCCCCCCeeecCCeEEccCEEEEcCCCEeCCCc
Q 044626 367 VGIGEDTQI-KKAVIDKNARIGKNVLIINKDGVQEGDREANGYIISEGIVVIIHGAEIADGS 427 (429)
Q Consensus 367 ~~ig~~~~i-~~~~ig~~~~ig~~~~i~~~~~~~~~~~~~~~~~i~~~~~~i~~~~~i~~~~ 427 (429)
+.||+++.| .++.|+++|+||++|.|.++..+.++.++|++|+|+++ +.|.+++.|++++
T Consensus 245 t~IG~~~~I~~~v~I~~~v~IG~~~~I~~~~~I~~~v~IG~~~~Ig~~-a~V~~~v~Ig~~~ 305 (372)
T 3pmo_A 245 TLIGNGVKLDNQIMIAHNVQIGDHTAMAACVGISGSAKIGRHCMLAGG-VGLVGHIEICDNV 305 (372)
T ss_dssp EEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECSSCEECTT-CEECSSCEECSSE
T ss_pred eEECCCCEECCCCEECCCCEECCCCEECCCCEECCCCEECCCeEEeCC-CEECCCCEECCCC
Confidence 445555555 45667778888888888888888888888888888888 4444444444433
No 51
>4eqy_A Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosam acyltransferase; ssgcid, beta helix, structural genomics, seattle structural center for infectious disease, transferase; 1.80A {Burkholderia thailandensis}
Probab=99.64 E-value=1.3e-15 Score=143.07 Aligned_cols=150 Identities=17% Similarity=0.201 Sum_probs=91.6
Q ss_pred cceeCCCCceecCCccCCCeEE-eeeEe-eCeEECCCcEEcc-eEee-CcEEcCCcEECCCCEEec------------Ce
Q 044626 277 YNFYDRDCPVYTMPRCLPPTMI-REAVI-RDSVVGDGCIINR-CKIK-GTVIGMRTRIGDGAVIED------------SV 340 (429)
Q Consensus 277 ~~~~~~~~~~~~~~~i~~~~~i-~~~~i-~~~~ig~~~~i~~-~~v~-~~~ig~~~~ig~~~~i~~------------~~ 340 (429)
.+.++|++.+.+++.+++++.| +++.| .++.||++|+|++ +.+. +++||++|.|+++|.|.. .+
T Consensus 22 ~~~I~p~a~I~~~a~ig~~v~Ig~~~~I~~~v~IG~~~~I~~~~~I~~~~~IG~~~~I~~~a~Ig~~~~~~~~~g~~~~v 101 (283)
T 4eqy_A 22 MSRIHPTAIIEPGAQLHETVEVGPYAIVGSNVTIGARTTIGSHSVIEGHTTIGEDNRIGHYASVGGRPQDMKYKDEPTRL 101 (283)
T ss_dssp -CCBCTTCEECTTCEECTTCEECTTCEECTTEEECTTCEECTTCEECSEEEECSSCEECTTEEEEECCCCTTCCCCCCEE
T ss_pred CcccCCCCEECCCCEECCCCEECCCCEECCCCEECCCCEECCCCEECCCcEECCCcEEcCCcEECCCCccccccCCCceE
Confidence 3445666666555555555555 44554 5788888888888 7775 688888888888888732 23
Q ss_pred EECC-cccccccccccCCccccCCcceeEeCCCCee-cceEEecCcEECCCcEEecCCCCCCCeeecCCeEEccCE----
Q 044626 341 IMGA-DFYQQGEDIQSSGKCINHKAIPVGIGEDTQI-KKAVIDKNARIGKNVLIINKDGVQEGDREANGYIISEGI---- 414 (429)
Q Consensus 341 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ig~~~~i-~~~~ig~~~~ig~~~~i~~~~~~~~~~~~~~~~~i~~~~---- 414 (429)
++++ ..++.+..+.+.. ..+...+.||+++.| .++.|+++|+||+++.++++..+.++.++|++++|++++
T Consensus 102 ~IG~~~~Ig~~~~I~~g~---~~~~~~~~IG~~~~I~~~~~I~~~~~IG~~v~i~~~~~i~~~v~Igd~~~Ig~~a~V~~ 178 (283)
T 4eqy_A 102 VIGDRNTIREFTTIHTGT---VQDAGVTTLGDDNWIMAYVHIGHDCRVGSHVVLSSNAQMAGHVEIGDWAIVGGMSGVHQ 178 (283)
T ss_dssp EECSSCEECTTEEEECCC---TTTTSEEEECSSCEECTTCEECTTCEECSSCEECTTCEECTTCEECTTCEECTTCEECT
T ss_pred EECCCcccCcceeEccce---ecCCCceEECCCcEECceeEEcCCcEECCCcEECCCceEcCCcEECCCeEEecCCEEcC
Confidence 3333 2233322222211 011122677777777 567777777777777777777777777777777777662
Q ss_pred -EEEcCCCEeCCCccC
Q 044626 415 -VVIIHGAEIADGSII 429 (429)
Q Consensus 415 -~~i~~~~~i~~~~vv 429 (429)
++||++++|+++++|
T Consensus 179 ~v~Ig~~~vvg~~s~V 194 (283)
T 4eqy_A 179 YVRIGAHSMLGGASAL 194 (283)
T ss_dssp TCEECTTCEECTTCEE
T ss_pred CeEECCCcEECCCCeE
Confidence 555666666666653
No 52
>3hsq_A Acyl-[acyl-carrier-protein]--UDP-N- acetylglucosamine O-acyltransferase; L.interrogans LPXA, LPXA, LPXA acyltransferase; 2.10A {Leptospira interrogans} SCOP: b.81.1.0 PDB: 3i3a_A* 3i3x_A*
Probab=99.64 E-value=3.4e-15 Score=138.43 Aligned_cols=146 Identities=18% Similarity=0.248 Sum_probs=100.4
Q ss_pred CCcceeCCCCceecCCccCCCeEEeeeEeeCeEECCCcEEcc-eEee-CcEEcCCcEECCCCEE-------------ecC
Q 044626 275 MRYNFYDRDCPVYTMPRCLPPTMIREAVIRDSVVGDGCIINR-CKIK-GTVIGMRTRIGDGAVI-------------EDS 339 (429)
Q Consensus 275 ~~~~~~~~~~~~~~~~~i~~~~~i~~~~i~~~~ig~~~~i~~-~~v~-~~~ig~~~~ig~~~~i-------------~~~ 339 (429)
.+.+++++++.+++++.|+|.+++. .++.||++|+|++ +.+. +++||++|.|++++.| ...
T Consensus 4 ~p~a~I~~~a~ig~~v~I~~~~~I~----~~v~IG~~~~I~~~~~I~~~~~IG~~~~I~~~a~Ig~~~~~~~~~g~~~~~ 79 (259)
T 3hsq_A 4 HPTAIIDPKAELHESVEVGPYSIIE----GNVSIQEGTIIEGHVKICAGSEIGKFNRFHQGAVIGVMPQDLGFNQQLLTK 79 (259)
T ss_dssp CTTCEECTTCEECTTCEECTTCEEC----SSCEECTTCEECTTCEECTTEEECSSCEECTTCEEEECCSCTTCCTTSCCC
T ss_pred CCCcEECCCCEECCCCEECCCCEEC----CCCEECCCCEEcCCcEEcCCcEECCCcEECCCCEECCCcccccccCccCCc
Confidence 4567777788888888888877774 5777888888887 7775 5888888888888888 455
Q ss_pred eEECC-cccccccccccCCccccCCcceeEeCCCCee-cceEEecCcEECCCcEEecCCCCCCCeeecCCeEEccCE---
Q 044626 340 VIMGA-DFYQQGEDIQSSGKCINHKAIPVGIGEDTQI-KKAVIDKNARIGKNVLIINKDGVQEGDREANGYIISEGI--- 414 (429)
Q Consensus 340 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ig~~~~i-~~~~ig~~~~ig~~~~i~~~~~~~~~~~~~~~~~i~~~~--- 414 (429)
+++++ ..++.+....+.. .++..+.||+++.| .++.|+++|.||+++.++++..+.++.++|++++|++++
T Consensus 80 v~IG~~~~Ig~~~~I~~~~----~~~~~~~IG~~~~I~~~~~I~~~~~IG~~~~i~~~~~i~~~v~Igd~~~Ig~~a~V~ 155 (259)
T 3hsq_A 80 TVIGDHNIFREYSNIHKGT----KEDSPTVIGNKNYFMGNSHVGHDCILGNNNILTHGAVLAGHVTLGNFAFISGLVAVH 155 (259)
T ss_dssp EEECSSCEECTTCEEECCS----BTTBCEEECSSCEECTTCEECTTCEECSSCEECTTCEECTTCEECSSCEECSSEEEC
T ss_pred EEECCCcEECCCCEECCCc----cCCCcEEECCCcEEcCCcEECCCcEECCccEEcCCceECCccEECCCcEEeCCCEEC
Confidence 55554 2233222222111 02223778888888 678888888888888888888888888888888888773
Q ss_pred --EEEcCCCEeCCCcc
Q 044626 415 --VVIIHGAEIADGSI 428 (429)
Q Consensus 415 --~~i~~~~~i~~~~v 428 (429)
+.||++++|+++|+
T Consensus 156 ~~v~Ig~~~~Vg~~s~ 171 (259)
T 3hsq_A 156 QFCFVGDYSMVAGLAK 171 (259)
T ss_dssp TTCEECTTCEECSSEE
T ss_pred CCCEECCCCEECCCCE
Confidence 44455555555554
No 53
>4e79_A UDP-3-O-acylglucosamine N-acyltransferase; lipopolysaccaride synthesis; 2.66A {Acinetobacter baumannii} PDB: 4e75_A
Probab=99.63 E-value=6.2e-15 Score=142.68 Aligned_cols=60 Identities=22% Similarity=0.270 Sum_probs=39.7
Q ss_pred eEeCCCCee-cceEEecCcEECCCcEEecCCCCCCCeeecCCeEEccCEEEEcCCCEeCCCc
Q 044626 367 VGIGEDTQI-KKAVIDKNARIGKNVLIINKDGVQEGDREANGYIISEGIVVIIHGAEIADGS 427 (429)
Q Consensus 367 ~~ig~~~~i-~~~~ig~~~~ig~~~~i~~~~~~~~~~~~~~~~~i~~~~~~i~~~~~i~~~~ 427 (429)
+.||+++.| .++.|+++|+||++|.|.++..+.++.++|++|+|+++ +.|.++..|++++
T Consensus 228 t~Ig~~~~I~~~v~I~~~v~IG~~~~i~~~~~i~~~v~IG~~~~Ig~~-s~V~~~~~Ig~~~ 288 (357)
T 4e79_A 228 TILEDGVIIDNLVQIAHNVHIGSNTAIAAKCGIAGSTKIGKNCILAGA-CGVAGHLSIADNV 288 (357)
T ss_dssp EEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECTT-CEECSSCEECSSE
T ss_pred ccccCCcccCCCcccCCCeEECCCCEECCCCEECCCcEECCCCEECcC-CEECCCeEECCCC
Confidence 334444444 34556777888888888888888888888888888887 4544444444444
No 54
>3r0s_A Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosam acyltransferase; structural genomics; 2.30A {Campylobacter jejuni subsp} SCOP: b.81.1.0
Probab=99.63 E-value=3.1e-15 Score=139.24 Aligned_cols=148 Identities=17% Similarity=0.219 Sum_probs=98.0
Q ss_pred CCcceeCCCCceecCCccCCCeEEeeeEeeCeEECCCcEEcc-eEee-CcEEcCCcEECCCCEEe-------------cC
Q 044626 275 MRYNFYDRDCPVYTMPRCLPPTMIREAVIRDSVVGDGCIINR-CKIK-GTVIGMRTRIGDGAVIE-------------DS 339 (429)
Q Consensus 275 ~~~~~~~~~~~~~~~~~i~~~~~i~~~~i~~~~ig~~~~i~~-~~v~-~~~ig~~~~ig~~~~i~-------------~~ 339 (429)
.+.+++++++.+++++.|+|+++|. +++.||++|+|++ +.+. +++||++|.|++++.|. ..
T Consensus 8 ~p~a~I~~~a~Ig~~v~I~~~~~I~----~~v~IG~~~~I~~~~~I~g~~~IG~~~~I~~~a~I~~~~~~~~~~g~~~~~ 83 (266)
T 3r0s_A 8 HPSAVIEEGAQLGDDVVIEAYAYVS----KDAKIGNNVVIKQGARILSDTTIGDHSRVFSYAIVGDIPQDISYKEEQKSG 83 (266)
T ss_dssp CTTCEECTTCEECTTCEECTTCEEC----TTCEECTTCEECTTCEECSSCEECTTCEECTTCEEEECCSCSCCC----CE
T ss_pred CCCCEECCCCEECCCCEECCCCEEC----CCCEECCCCEEcCCeEEeCCcEECCCcEEccCceeccCCccccccCCcCce
Confidence 4566777777777777777777775 5778888888888 7775 78888888888888884 34
Q ss_pred eEECC-cccccccccccCCccccCCcceeEeCCCCee-cceEEecCcEECCCcEEecCCCCCCCeeecCCeEEccCE---
Q 044626 340 VIMGA-DFYQQGEDIQSSGKCINHKAIPVGIGEDTQI-KKAVIDKNARIGKNVLIINKDGVQEGDREANGYIISEGI--- 414 (429)
Q Consensus 340 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ig~~~~i-~~~~ig~~~~ig~~~~i~~~~~~~~~~~~~~~~~i~~~~--- 414 (429)
+.+++ ..++.+....+.. ..+...+.||+++.| .++.|+++|+||+++.++++..+.++.++|++++|++++
T Consensus 84 v~IG~~~~Ig~~~~I~~~~---~~~~~~~~IG~~~~I~~~~~I~~~~~IG~~~~i~~~~~i~~~v~Igd~~~Ig~~a~V~ 160 (266)
T 3r0s_A 84 VVIGKNATIREFATINSGT---AKGDGFTRIGDNAFIMAYCHIAHDCLLGNNIILANNATLAGHVELGDFTVVGGLTPIH 160 (266)
T ss_dssp EEECTTCEECTTCEEECCC---TTTTSEEEECTTCEECTTCEECTTCEECSSCEECTTCEECTTCEECTTCEECTTCEEC
T ss_pred EEECCCCEECCceEecCCc---ccCCccEEECCCceeCCcceEccccccCCCeEECCCceecCCeEECCCcEEccCCEEC
Confidence 44443 2233322222211 011122677777777 677777777777777777777777777777777777662
Q ss_pred --EEEcCCCEeCCCccC
Q 044626 415 --VVIIHGAEIADGSII 429 (429)
Q Consensus 415 --~~i~~~~~i~~~~vv 429 (429)
++||++++|+++++|
T Consensus 161 ~~v~Ig~~a~Vg~~s~V 177 (266)
T 3r0s_A 161 QFVKVGEGCMIAGASAL 177 (266)
T ss_dssp TTCEECTTCEECSSCBB
T ss_pred CCcEECCCCEEccCCeE
Confidence 556666666666654
No 55
>1j2z_A Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosam acyltransferase; UDP-N-acetylglucosamine acyltransferase, LPXA, LEFT-handed B structure; HET: SOG TLA; 2.10A {Helicobacter pylori} SCOP: b.81.1.1
Probab=99.63 E-value=2.1e-15 Score=140.55 Aligned_cols=147 Identities=16% Similarity=0.146 Sum_probs=97.6
Q ss_pred CcceeCCCCceecCCccCCCeEEeeeEeeCeEECCCcEEcc-eEee-CcEEcCCcEECCCCEEe------------cCeE
Q 044626 276 RYNFYDRDCPVYTMPRCLPPTMIREAVIRDSVVGDGCIINR-CKIK-GTVIGMRTRIGDGAVIE------------DSVI 341 (429)
Q Consensus 276 ~~~~~~~~~~~~~~~~i~~~~~i~~~~i~~~~ig~~~~i~~-~~v~-~~~ig~~~~ig~~~~i~------------~~~~ 341 (429)
+.+++++++.+++++.|+|.++|. +++.||++|+|++ +.|. +++||++|.|+++|+|. ..++
T Consensus 6 p~a~I~~~a~Ig~~~~Ig~~~~I~----~~v~IG~~~~I~~~~~I~g~~~IG~~~~I~~~~~Ig~~~~~~~~~g~~~~~~ 81 (270)
T 1j2z_A 6 KTAIISPKAEINKGVEIGEFCVIG----DGVKLDEGVKLHNNVTLQGHTFVGKNTEIFPFAVLGTQPQDLKYKGEYSELI 81 (270)
T ss_dssp TTCEECTTSEECTTCEECTTCEEC----TTCEECTTCEECTTCEECSEEEECTTCEECTTCEESCCCSCSSCCSCCCEEE
T ss_pred CCCEECCCCEECCCCEECCCCEEC----CCCEECCCCEEcCCcEEeCCeEEcCCCEEEeeeEECcCCccccccCCccceE
Confidence 445566666666666666655554 4788888888888 7776 78888888888888884 2333
Q ss_pred ECC-cccccccccccCCccccCCcceeEeCCCCee-cceEEecCcEECCCcEEecCCCCCCCeeecCCeEEccCE-----
Q 044626 342 MGA-DFYQQGEDIQSSGKCINHKAIPVGIGEDTQI-KKAVIDKNARIGKNVLIINKDGVQEGDREANGYIISEGI----- 414 (429)
Q Consensus 342 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~ig~~~~i-~~~~ig~~~~ig~~~~i~~~~~~~~~~~~~~~~~i~~~~----- 414 (429)
+++ ..++.+..+.... ..+...+.||+++.| .++.|+++|.||+++.|.++..+.++.++|++++|++++
T Consensus 82 IG~~~~I~~~~~I~~~~---~~~~~~~~IG~~~~I~~~~~I~~~~~IG~~~~I~~~~~i~~~v~Igd~~~Ig~~a~V~~~ 158 (270)
T 1j2z_A 82 IGEDNLIREFCMINPGT---EGGIKKTLIGDKNLLMAYVHVAHDCVIGSHCILANGVTLAGHIEIGDYVNIGGLTAIHQF 158 (270)
T ss_dssp ECSSCEECTTCEECCCC---TTTTSEEEECSSCEECTTCEECTTCEECSSCEECTTCEECTTCEECSSCEECTTCEECTT
T ss_pred ECCCCEECCCeEEcCCe---ecCCccEEECCCcEECcccccCCCcEECCCcEEcCCccccCccEECCCeEEecCCEECCC
Confidence 333 2233222222111 001123788888888 678888888888888888888887888888888887763
Q ss_pred EEEcCCCEeCCCccC
Q 044626 415 VVIIHGAEIADGSII 429 (429)
Q Consensus 415 ~~i~~~~~i~~~~vv 429 (429)
+.||++++|+++|+|
T Consensus 159 v~IG~~a~Ig~~s~V 173 (270)
T 1j2z_A 159 VRIAKGCMIAGKSAL 173 (270)
T ss_dssp CEECTTCEECTTCEE
T ss_pred cEeCCceEEecCcEe
Confidence 556667777776653
No 56
>3d5n_A Q97W15_sulso; NESG, SSR125, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.80A {Sulfolobus solfataricus}
Probab=99.62 E-value=1.8e-15 Score=134.46 Aligned_cols=184 Identities=11% Similarity=0.123 Sum_probs=113.0
Q ss_pred CeEEEEEcCCCCCCcccccccccccccccCCcchhHHHHHHhhHhcCCCeEEEEeecChhHHHHHHhccccCcccCCCCc
Q 044626 1 SVAAVVFGDGSESRLYPLTKRRSEGAIPLAANYRLVDAVVSNCINSNINKIYALTQFNSTSLNLHLSRAFSGILRGKDGF 80 (429)
Q Consensus 1 ~m~avIla~G~gsRl~plt~~~pK~Llpi~g~~plI~~~i~~l~~~gi~~I~Iv~~~~~~~i~~~l~~~~~~~~~~~~~~ 80 (429)
+|.|||||||.|+||+ .||+|+|++|+ |||+|+++.|... +++|++++..+.+.+++.. .
T Consensus 2 ~~~~iIlAgG~g~Rmg-----~~K~l~~i~g~-pll~~~l~~l~~~---~ivvv~~~~~~~~~~~~~~-----------~ 61 (197)
T 3d5n_A 2 NIGVIILAAGEGKRFG-----GDKLLAKIDNT-PIIMRTIRIYGDL---EKIIIVGKYVNEMLPLLMD-----------Q 61 (197)
T ss_dssp CEEEEEECSCCTTCCC-----SSGGGSBSSSS-BHHHHHHHHTTTS---BCCEEECTTHHHHGGGCTT-----------S
T ss_pred ceEEEEECCcCcccCC-----CCeeeCEeCce-EHHHHHHHHHHhC---CEEEEECCCHHHHHHHhcC-----------C
Confidence 4789999999999998 49999999999 9999999999876 8888888875555444331 1
Q ss_pred EEEEeccccccccCcccCcHHHHHHHHHHhhcCCCCeEEEEcCce-eE-eccHHHHHHHHHhcCCceEEEEEeccCCCCC
Q 044626 81 VEVIAAYQSLEDQDWFQGNADAIRRCLWVLEEYPVTEFLILPGHH-LY-KMDYQRLIEAHRNNKADITIVALNAIRDKHP 158 (429)
Q Consensus 81 v~i~~~~~~~~~~~~~~Gt~~al~~~~~~i~~~~~~~~lvl~gD~-i~-~~~l~~~~~~~~~~~~~~ti~~~~~~~~~~~ 158 (429)
+ ++. .. .|..|++++++.+++.+.. .+.+++++||. +. ...+..+++.+ +.++++++...
T Consensus 62 ~-~v~-~~-----~~~~G~~~si~~al~~~~~--~~~vlv~~~D~P~i~~~~i~~l~~~~-~~~~~~~~~~~-------- 123 (197)
T 3d5n_A 62 I-VIY-NP-----FWNEGISTSLKLGLRFFKD--YDAVLVALGDMPFVTKEDVNKIINTF-KPNCKAVIPTH-------- 123 (197)
T ss_dssp C-EEE-CT-----TGGGCHHHHHHHHHHHTTT--SSEEEEEETTCCCSCHHHHHHHHHTC-CTTCSEEEEEE--------
T ss_pred E-EEE-CC-----CCCCCHHHHHHHHHHhhcc--CCcEEEEeCCccccCHHHHHHHHHHh-cCCCcEEEEEe--------
Confidence 2 221 11 1236999999999988863 27899999999 54 45568888776 44444333110
Q ss_pred CccEEEEcCCCCEEEEEecCcccccccccCCCCCCCCCCCCCCcceeeEEEEcHHHHHHHHHhhCCCCcccccccchhcc
Q 044626 159 GFGLLRVNPVNQVIEFSMKSERETITSISGKSSRKSDSVASGNFPSMGIYLINRDTMSRLLKEYLPEATDLGSEVIPAAI 238 (429)
Q Consensus 159 ~~g~v~~d~~~~v~~~~ek~~~~~~~~~~~~~~~~~~~~~~~~~~~~Giy~~~~~~l~~~l~~~~~~~~~~~~d~l~~l~ 238 (429)
+| +...+ .+|+++.|..+. .. ... .++-..+.
T Consensus 124 ---------~g-------~~~~P--------------------------~~~~~~~l~~l~-~l-~g~----~~~~~~l~ 155 (197)
T 3d5n_A 124 ---------KG-------ERGNP--------------------------VLISKSLFNEIE-KL-RGD----VGARVILN 155 (197)
T ss_dssp ---------TT-------EECSC--------------------------EEEEHHHHHHHH-HC-CTT----CCTHHHHT
T ss_pred ---------CC-------cccCC--------------------------EEECHHHHHHHH-cc-CCC----ccHHHHHH
Confidence 01 00111 278888887554 22 211 12222222
Q ss_pred cCCceEEEEEec--ceEEecCCHHHHHHHhHhhh
Q 044626 239 SIGMKVEAYLFD--GYWEDMRSIEAFYHANMECI 270 (429)
Q Consensus 239 ~~g~~i~~~~~~--~~~~~i~t~~~~~~an~~~l 270 (429)
+.+.++..++.+ +.|.+|+||+||..++..+.
T Consensus 156 ~~~~~v~~v~~~~~~~~~dIdTpeDl~~~~~~~~ 189 (197)
T 3d5n_A 156 KIKIEELCFIECSEGVLIDIDKKEDLMRLRDFHP 189 (197)
T ss_dssp TSCGGGEEEEECCGGGTCCTTTC-----------
T ss_pred hCccCeEEEEcCCCCcccCCCCHHHHHHHHHhhc
Confidence 223456666654 57899999999988866544
No 57
>2e8b_A Probable molybdopterin-guanine dinucleotide biosy protein A; putative protein, molybdenum cofactor, structural G NPPSFA; 1.61A {Aquifex aeolicus}
Probab=99.62 E-value=8.1e-16 Score=137.15 Aligned_cols=177 Identities=9% Similarity=0.076 Sum_probs=109.6
Q ss_pred eEEEEEcCCCCCCcccccccccccccccCCcchhHHHHHHhhHhcCCCeEEEEeecChhHHHHHHhccccCcccCCCCcE
Q 044626 2 VAAVVFGDGSESRLYPLTKRRSEGAIPLAANYRLVDAVVSNCINSNINKIYALTQFNSTSLNLHLSRAFSGILRGKDGFV 81 (429)
Q Consensus 2 m~avIla~G~gsRl~plt~~~pK~Llpi~g~~plI~~~i~~l~~~gi~~I~Iv~~~~~~~i~~~l~~~~~~~~~~~~~~v 81 (429)
+.|||||||.|+||+ .||+|+|++|+ |||+|+++.+..+ +++|+|++++... +++. + +
T Consensus 15 ~~~iILA~G~g~Rmg-----~~K~ll~i~g~-pll~~~l~~l~~~-~~~i~vv~~~~~~---~~~~------~------~ 72 (201)
T 2e8b_A 15 NTCYVLAGGKSKRFG-----EDKLLYEIKGK-KVIERVYETAKSV-FKEVYIVAKDREK---FSFL------N------A 72 (201)
T ss_dssp CEEEEEEESSCCCCS-----TTHHHHHHHHH-HHHHHHHHHHHTT-CSEEEEEESCSGG---GGGG------T------C
T ss_pred ceEEEECCCCCccCC-----CCcccceECce-EHHHHHHHHHHHh-CCEEEEEeCcHHH---hhcC------C------c
Confidence 579999999999998 79999999999 9999999999988 9999999987654 2222 1 1
Q ss_pred EEEeccccccccCcccCcHHHHHHHHHHhhcCCCCeEEEEcCce-eEec-cHHH-HHHHHHhcCCceEEEEEeccCCCCC
Q 044626 82 EVIAAYQSLEDQDWFQGNADAIRRCLWVLEEYPVTEFLILPGHH-LYKM-DYQR-LIEAHRNNKADITIVALNAIRDKHP 158 (429)
Q Consensus 82 ~i~~~~~~~~~~~~~~Gt~~al~~~~~~i~~~~~~~~lvl~gD~-i~~~-~l~~-~~~~~~~~~~~~ti~~~~~~~~~~~ 158 (429)
.++.... +..|++++++.+++.+. .+.+++++||+ +.+. .+.. ++ +.++++.
T Consensus 73 ~~v~~~~------~~~g~~~~i~~al~~~~---~~~~lv~~~D~P~i~~~~i~~~l~------~~~~~v~---------- 127 (201)
T 2e8b_A 73 PVVLDEF------EESASIIGLYTALKHAK---EENVFVLSGDLPLMKKETVLYVLE------NFKEPVS---------- 127 (201)
T ss_dssp CEEECCC------SSCCHHHHHHHHHHHCS---SSEEEEEETTCTTCCHHHHHHHHH------TCCSSEE----------
T ss_pred eEEecCC------CCCCcHHHHHHHHHHcC---CCCEEEEeCCcCcCCHHHHHHHHh------cCCEEEE----------
Confidence 1322111 23699999999998875 38999999999 3343 3555 55 1222110
Q ss_pred CccEEEEcCCCCEEEEEecCcccccccccCCCCCCCCCCCCCCcceeeEEEEcHHHHHHHHHhhCCCCcccccccchhcc
Q 044626 159 GFGLLRVNPVNQVIEFSMKSERETITSISGKSSRKSDSVASGNFPSMGIYLINRDTMSRLLKEYLPEATDLGSEVIPAAI 238 (429)
Q Consensus 159 ~~g~v~~d~~~~v~~~~ek~~~~~~~~~~~~~~~~~~~~~~~~~~~~Giy~~~~~~l~~~l~~~~~~~~~~~~d~l~~l~ 238 (429)
.. +| ......|+| |+++.+.. +++..........++++.
T Consensus 128 ------~~-~g------------------------------~~~p~~giy-~~~~~~~~-l~~~~~~g~~~~~~~l~~-- 166 (201)
T 2e8b_A 128 ------VA-KT------------------------------EKLHTLVGV-YSKKLLEK-IEERIKKGDYRIWALLKD-- 166 (201)
T ss_dssp ------EE-ES------------------------------SSEEEEEEE-EEGGGHHH-HHHHHHTTCCCHHHHHHH--
T ss_pred ------ec-CC------------------------------ceeeEEEEE-eChhHHHH-HHHHHHcCCchHHHHHHH--
Confidence 00 01 013467999 99887763 332111111122344433
Q ss_pred cCCceEEEEEec--ceEE--ecCCHHHHHHHhHhh
Q 044626 239 SIGMKVEAYLFD--GYWE--DMRSIEAFYHANMEC 269 (429)
Q Consensus 239 ~~g~~i~~~~~~--~~~~--~i~t~~~~~~an~~~ 269 (429)
.++..+.++ +.|. ||+||++|.++...+
T Consensus 167 ---~~~~~~~~~~~~~~~~~dintpedl~~~~~~~ 198 (201)
T 2e8b_A 167 ---VGYNEVEIPEELRYTLLNMNTKEDLKRILAIE 198 (201)
T ss_dssp ---HCCEEEECCGGGGGGGCCSCCC----------
T ss_pred ---CCeEEeccccccchhhcCCCCHHHHHHHHHHh
Confidence 235555553 5789 999999998886543
No 58
>3r8y_A 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N- acetyltransferase; structural genomics, csgid; 1.70A {Bacillus anthracis} PDB: 3cj8_A*
Probab=99.61 E-value=1.7e-15 Score=138.91 Aligned_cols=138 Identities=21% Similarity=0.354 Sum_probs=73.3
Q ss_pred ceEEEEEecce----EEecCCHHHHHHHhHhhhcccCCC----cceeCCCCceecCCccCCCeEEeeeEeeCeEECCCcE
Q 044626 242 MKVEAYLFDGY----WEDMRSIEAFYHANMECIKRSNMR----YNFYDRDCPVYTMPRCLPPTMIREAVIRDSVVGDGCI 313 (429)
Q Consensus 242 ~~i~~~~~~~~----~~~i~t~~~~~~an~~~l~~~~~~----~~~~~~~~~~~~~~~i~~~~~i~~~~i~~~~ig~~~~ 313 (429)
.+++.+...++ |.|+++ ++++|+.++...... ...+......+.++.|+|++.+. +++.||++|.
T Consensus 39 ~~~~~~~~~~~~~g~w~di~~---~l~~n~~~l~~~~~~~~~~~~~~~~~~~~~~~~~I~~~a~I~----~~v~Ig~~~~ 111 (240)
T 3r8y_A 39 VQAFVNKKSGVLFGEWSEIKT---ILDENSKYIVDYVVENDRRNSAIPMLDLKGIKARIEPGAIIR----DHVEIGDNAV 111 (240)
T ss_dssp SEEEECSSEEEEEEEHHHHHH---HHHHTTTTEEEEEEEECCBSBCSCBCCCTTCSSEECTTCEEB----SSCEECTTCE
T ss_pred ceEEEcCCCeEEEccHHHHHH---HHHhccceechhhhhhhhhhhccchhhccCCCCEECCCCEEC----CCcEECCCCE
Confidence 56777666555 777766 888888877543110 00010001112233444444443 3455555555
Q ss_pred Ecc-eEe-eCcEEcCCcEECCCCEEecCeEECCcccccccccccCCccccCCcceeEeCCCCeecc---------eEEec
Q 044626 314 INR-CKI-KGTVIGMRTRIGDGAVIEDSVIMGADFYQQGEDIQSSGKCINHKAIPVGIGEDTQIKK---------AVIDK 382 (429)
Q Consensus 314 i~~-~~v-~~~~ig~~~~ig~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~~~i~~---------~~ig~ 382 (429)
|+. +.+ .+++||++|.|+.++.|.+.++++.. |.|++++.+.+ ++||+
T Consensus 112 I~~~s~I~~~~~IG~~~~I~~~~~I~~~~~IG~~---------------------~~I~~~~~i~~~~~~~~~~~~~Ig~ 170 (240)
T 3r8y_A 112 IMMNATINIGAVIGEGSMIDMNAVLGGRATVGKN---------------------CHVGAGAVLAGVIEPPSAKPVIVED 170 (240)
T ss_dssp ECTTCEECTTCEECTTCEECTTCEECTTCEECTT---------------------CEECTTCEECCCCSCTTSCCCEECT
T ss_pred ECCCCEECCCCEECCCCEECCCCEECCCCEECCC---------------------cEECCCcEECCCccCCCCCCcEECC
Confidence 555 444 25666666666666666544444432 56666666644 66666
Q ss_pred CcEECCCcEEecCCCCCCCeeecCCeEEccC
Q 044626 383 NARIGKNVLIINKDGVQEGDREANGYIISEG 413 (429)
Q Consensus 383 ~~~ig~~~~i~~~~~~~~~~~~~~~~~i~~~ 413 (429)
+|.||.+|+|. .++++|++++|+++
T Consensus 171 ~~~IG~~~~I~------~~~~Ig~~~~I~~g 195 (240)
T 3r8y_A 171 DVVIGANVVVL------EGVTVGKGAVVAAG 195 (240)
T ss_dssp TCEECTTCEEC------TTCEECTTCEECTT
T ss_pred CCEECCCCEEC------CCcEECCCCEECCC
Confidence 66666666665 34444555555555
No 59
>1jv1_A Glcnac1P uridyltransferase isoform 1: AGX1; nucleotidyltransferase, alternative splicing; HET: UD1; 1.90A {Homo sapiens} SCOP: c.68.1.5 PDB: 1jv3_A* 1jvg_A* 1jvd_A* 1vm8_A*
Probab=99.60 E-value=1.6e-14 Score=144.72 Aligned_cols=204 Identities=14% Similarity=0.065 Sum_probs=137.6
Q ss_pred CeEEEEEcCCCCCCccccccccccccccc---CCcchhHHHHHHhhHh--------cC----CCeEEEEeecChhHHHHH
Q 044626 1 SVAAVVFGDGSESRLYPLTKRRSEGAIPL---AANYRLVDAVVSNCIN--------SN----INKIYALTQFNSTSLNLH 65 (429)
Q Consensus 1 ~m~avIla~G~gsRl~plt~~~pK~Llpi---~g~~plI~~~i~~l~~--------~g----i~~I~Iv~~~~~~~i~~~ 65 (429)
||.+||||||.||||+ ...||+|+|| .|+ |+|++.++.+.+ .| +..+++...+..+.+.++
T Consensus 102 kvavViLAGG~GTRLg---~~~PK~l~pv~~~~gk-~~le~~~e~l~~lq~la~~~~G~~~~ip~vImtS~~t~e~t~~~ 177 (505)
T 1jv1_A 102 KVAVLLLAGGQGTRLG---VAYPKGMYDVGLPSRK-TLFQIQAERILKLQQVAEKYYGNKCIIPWYIMTSGRTMESTKEF 177 (505)
T ss_dssp CEEEEEECCCCCCTTS---CSSCGGGCCCCCTTCC-CHHHHHHHHHHHHHHHHHHHHSSCCCCCEEEEECTTTHHHHHHH
T ss_pred ceEEEEEcCCccccCC---CCCCCccceeecCCCC-cHHHHHHHHHHHHHHHHHHhcCCCccceEEEEecCCCHHHHHHH
Confidence 6889999999999996 5789999999 799 999999999876 35 666666666668899999
Q ss_pred HhccccCcccCCCCcEEEEeccccc---------------c-ccCcccCcHHHHHHHHH-----HhhcCCCCeEEEEcCc
Q 044626 66 LSRAFSGILRGKDGFVEVIAAYQSL---------------E-DQDWFQGNADAIRRCLW-----VLEEYPVTEFLILPGH 124 (429)
Q Consensus 66 l~~~~~~~~~~~~~~v~i~~~~~~~---------------~-~~~~~~Gt~~al~~~~~-----~i~~~~~~~~lvl~gD 124 (429)
+.+... ++++.+ . +.+..|.. . -...|.|+++.+..+.. .+.....+.|+|+++|
T Consensus 178 f~~~~~-fGl~~~-~--I~~f~Q~~~P~i~~~g~~~l~~~~~~e~~P~GtGG~~~~L~~sg~L~~l~~~g~e~~~V~n~D 253 (505)
T 1jv1_A 178 FTKHKY-FGLKKE-N--VIFFQQGMLPAMSFDGKIILEEKNKVSMAPDGNGGLYRALAAQNIVEDMEQRGIWSIHVYCVD 253 (505)
T ss_dssp HHHTGG-GGSCGG-G--EEEEECCEEECEETTSCBCEEETTEECEEECCGGGHHHHHHHTTHHHHHHHTTCCEEEEEETT
T ss_pred HHhhhh-cCCCcC-c--eEEEEecceEEEcCCCcccccCCcccccCCCCchHHHHHHHHcCcHHHHHhcCCCEEEEEECC
Confidence 987433 454310 1 21112110 0 01126899998876542 2322234899999999
Q ss_pred ee-EeccHHHHHHHHHhcCCceEEEEEeccCCCCCCccEEEEcCCCC--EEEEEecCcccccccccCCCCCCCCCCCCCC
Q 044626 125 HL-YKMDYQRLIEAHRNNKADITIVALNAIRDKHPGFGLLRVNPVNQ--VIEFSMKSERETITSISGKSSRKSDSVASGN 201 (429)
Q Consensus 125 ~i-~~~~l~~~~~~~~~~~~~~ti~~~~~~~~~~~~~g~v~~d~~~~--v~~~~ek~~~~~~~~~~~~~~~~~~~~~~~~ 201 (429)
++ +......++.+|..+++++++.+.+.. ..+..+|++..+ +|+ +.++.++|..... ..+.. .....+
T Consensus 254 n~L~~~~d~~~lg~~~~~~~~~~~~v~~k~-~~~e~~Gvl~~~-dg~~~vvEy~E~p~~~~~---~~~~~----g~~~~~ 324 (505)
T 1jv1_A 254 NILVKVADPRFIGFCIQKGADCGAKVVEKT-NPTEPVGVVCRV-DGVYQVVEYSEISLATAQ---KRSSD----GRLLFN 324 (505)
T ss_dssp BTTCCTTCHHHHHHHHHTTCSEEEEEEECC-STTCSCCEEEEE-TTEEEEECGGGSCHHHHH---CBCTT----SSBSSC
T ss_pred ccccccchHHHHHHHHHcCCCEEEEEEEcc-CCccCcceEEEE-CCeEEEEEEeeCCHHHhh---hcccc----cccccc
Confidence 95 667777899999999999988766422 245788988764 454 3445555442210 00000 011346
Q ss_pred cceeeEEEEcHHHHHHHHHh
Q 044626 202 FPSMGIYLINRDTMSRLLKE 221 (429)
Q Consensus 202 ~~~~Giy~~~~~~l~~~l~~ 221 (429)
..++|+|+|+.++|+++.++
T Consensus 325 ~~N~~~~~f~l~~L~~i~~~ 344 (505)
T 1jv1_A 325 AGNIANHFFTVPFLRDVVNV 344 (505)
T ss_dssp EEEEEEEEEEHHHHHHHHHT
T ss_pred eeeEEEEEecHHHHHHHHHh
Confidence 78999999999999877764
No 60
>3t57_A UDP-N-acetylglucosamine O-acyltransferase domain- protein; LEFT-handed parallel beta helix, lipid A biosynthesis, lipid synthesis; 2.10A {Arabidopsis thaliana}
Probab=99.59 E-value=8.3e-15 Score=139.00 Aligned_cols=63 Identities=19% Similarity=0.184 Sum_probs=51.1
Q ss_pred eEeCCCCee-cceEEecCcEECCCcEEecCCCCCCCeeecCCeEEccCE-----EEEcCCCEeCCCccC
Q 044626 367 VGIGEDTQI-KKAVIDKNARIGKNVLIINKDGVQEGDREANGYIISEGI-----VVIIHGAEIADGSII 429 (429)
Q Consensus 367 ~~ig~~~~i-~~~~ig~~~~ig~~~~i~~~~~~~~~~~~~~~~~i~~~~-----~~i~~~~~i~~~~vv 429 (429)
+.||+++.| .++.|+++|+||++|.+.++..+.++.++|++++|+.++ ++||++++|++||+|
T Consensus 133 ~~IG~~~~I~~~~~I~~~~~IG~~~~i~~~~~i~g~v~Igd~~~Ig~~~~V~~~v~IG~~a~ig~gs~V 201 (305)
T 3t57_A 133 TVIGDNNLIMGSCHIAHDCKIGDRNIFANNTLLAGHVVVEDNTHTAGASVVHQFCHIGSFAFIGGGSVV 201 (305)
T ss_dssp EEECSSCEECTTCEECTTCEECSSCEECTTCEECTTCEECSSCEECTTCEECTTCEECTTCEECTTCEE
T ss_pred cEEccCccccceEEEeCceEeCCceEECCCcccCCCCEECCceEEcCCCEEcCCeEECCCCEEcCCCeE
Confidence 678888888 788889999999999998888888888888888888773 567777777777764
No 61
>2qia_A UDP-N-acetylglucosamine acyltransferase; LEFT-handed parallel beta helix; HET: U20; 1.74A {Escherichia coli K12} SCOP: b.81.1.1 PDB: 1lxa_A 2jf3_A* 2aq9_A* 2qiv_X* 2jf2_A
Probab=99.59 E-value=1.3e-14 Score=134.79 Aligned_cols=148 Identities=16% Similarity=0.168 Sum_probs=87.1
Q ss_pred eeCCCCceecCCccCCCeEE-eeeEe-eCeEECCCcEEcc-eEee-CcEEcCCcEECCCCEEec------------CeEE
Q 044626 279 FYDRDCPVYTMPRCLPPTMI-REAVI-RDSVVGDGCIINR-CKIK-GTVIGMRTRIGDGAVIED------------SVIM 342 (429)
Q Consensus 279 ~~~~~~~~~~~~~i~~~~~i-~~~~i-~~~~ig~~~~i~~-~~v~-~~~ig~~~~ig~~~~i~~------------~~~~ 342 (429)
.++|.+.+.+++.+++++.| +++.+ .++.||++|+|++ +.+. +++||++|.|+++++|.. .+++
T Consensus 7 ~I~p~a~I~~~a~Ig~~v~I~~~~~I~~~v~IG~~~~I~~~~~I~~~~~IG~~~~I~~~~~I~~~~~~~~~~g~~~~~~I 86 (262)
T 2qia_A 7 FVHPTAIVEEGASIGANAHIGPFCIVGPHVEIGEGTVLKSHVVVNGHTKIGRDNEIYQFASIGEVNQDLKYAGEPTRVEI 86 (262)
T ss_dssp EECTTCEECTTCEECTTCEECTTCEECTTEEECTTCEECSSCEECSEEEECSSCEECTTCEEEECCSCTTCCSCCCEEEE
T ss_pred eECCCCEECCCCEECCCCEECCCCEECCCCEECCCcEECCCCEECCCcEECCCCEEecceEECcCCccccccCCccceEE
Confidence 34444444444444444444 33333 4778888888888 7665 688888888888887753 2333
Q ss_pred CC-cccccccccccCCccccCCcceeEeCCCCee-cceEEecCcEECCCcEEecCCCCCCCeeecCCeEEccCE-----E
Q 044626 343 GA-DFYQQGEDIQSSGKCINHKAIPVGIGEDTQI-KKAVIDKNARIGKNVLIINKDGVQEGDREANGYIISEGI-----V 415 (429)
Q Consensus 343 ~~-~~~~~~~~~~~~~~~~~~~~~~~~ig~~~~i-~~~~ig~~~~ig~~~~i~~~~~~~~~~~~~~~~~i~~~~-----~ 415 (429)
++ ..++.+..+.... ..+...+.||+++.| .++.|+++|.||+++.+.++..+.++.++|++++|++++ +
T Consensus 87 G~~~~Ig~~~~I~~~~---~~~~~~~~IG~~~~Ig~~~~I~~~~~Ig~~~~i~~~~~i~~~v~Ig~~~~Ig~~~~I~~~v 163 (262)
T 2qia_A 87 GDRNRIRESVTIHRGT---VQGGGLTKVGSDNLLMINAHIAHDCTVGNRCILANNATLAGHVSVDDFAIIGGMTAVHQFC 163 (262)
T ss_dssp CSSCEECTTCEEECCC---TTTTSEEEECSSCEECTTCEECTTCEECSSCEECTTCEECTTCEECTTCEECTTCEECTTC
T ss_pred CCCceeCCCCEEcCCc---cCCCCcCEECCCcEEeeeeEECCCCEECCCeEECCcccccCCcEECCCcEEccCCEECCCC
Confidence 33 2222222222111 001123677777777 566677777777777777776666666666666666652 5
Q ss_pred EEcCCCEeCCCccC
Q 044626 416 VIIHGAEIADGSII 429 (429)
Q Consensus 416 ~i~~~~~i~~~~vv 429 (429)
.||++++|+++|+|
T Consensus 164 ~Ig~~~~ig~~s~V 177 (262)
T 2qia_A 164 IIGAHVMVGGCSGV 177 (262)
T ss_dssp EECTTCEECSSCEE
T ss_pred EECCCCEEccCCEE
Confidence 67777777777754
No 62
>4e6u_A Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosam acyltransferase; lipopolysaccaride synthesis; 1.41A {Acinetobacter baumannii} PDB: 4e6t_A*
Probab=99.59 E-value=1.6e-14 Score=134.43 Aligned_cols=147 Identities=16% Similarity=0.172 Sum_probs=86.6
Q ss_pred CcceeCCCCceecCCccCCCeEEeeeEeeCeEECCCcEEcc-eEee-CcEEcCCcEECCCCEEe------------cCeE
Q 044626 276 RYNFYDRDCPVYTMPRCLPPTMIREAVIRDSVVGDGCIINR-CKIK-GTVIGMRTRIGDGAVIE------------DSVI 341 (429)
Q Consensus 276 ~~~~~~~~~~~~~~~~i~~~~~i~~~~i~~~~ig~~~~i~~-~~v~-~~~ig~~~~ig~~~~i~------------~~~~ 341 (429)
+.+.+++++.+++++.|+|.+++. .++.||++|+|++ +.+. +++||++|.|++++.|. ..++
T Consensus 12 p~a~i~~~a~Ig~~v~Ig~~~~I~----~~v~IG~~~~I~~~~~I~~~~~IG~~~~I~~~a~Ig~~~~~~~~~g~~~~~~ 87 (265)
T 4e6u_A 12 STAIIDPSAVIASDVQIGPYCIIG----PQVTIGAGTKLHSHVVVGGFTRIGQNNEIFQFASVGEVCQDLKYKGEETWLE 87 (265)
T ss_dssp TTCEECTTCEECTTCEECTTCEEC----TTEEECTTCEECSSCEECSSEEECSSCEECTTCEEEECCCCTTCCSCCCEEE
T ss_pred CCCEECCCCEECCCCEECCCeEEC----CCCEECCCCEEcCCcEEeCCcEECCCCEEcCCcEECCccccccccCCCCeEE
Confidence 344455555555555555555553 5777888888877 6665 68888888888888773 2334
Q ss_pred ECC-cccccccccccCCccccCCcceeEeCCCCee-cceEEecCcEECCCcEEecCCCCCCCeeecCCeEEccCE-----
Q 044626 342 MGA-DFYQQGEDIQSSGKCINHKAIPVGIGEDTQI-KKAVIDKNARIGKNVLIINKDGVQEGDREANGYIISEGI----- 414 (429)
Q Consensus 342 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~ig~~~~i-~~~~ig~~~~ig~~~~i~~~~~~~~~~~~~~~~~i~~~~----- 414 (429)
+++ ..++.+..+.+.. ..+...+.||+++.| .++.|+++|.||+++.+.++..+.++.++|++++|++++
T Consensus 88 IG~~~~Ig~~~~I~~g~---~~~~~~~~IG~~~~I~~~~~I~~~~~Ig~~~~i~~~~~i~~~v~Igd~~~Ig~~a~V~~~ 164 (265)
T 4e6u_A 88 IGNNNLIREHCSLHRGT---VQDNALTKIGSHNLLMVNTHIAHDCIVGDHNIFANNVGVAGHVHIGDHVIVGGNSGIHQF 164 (265)
T ss_dssp ECSSCEECTTCEEECCC---TTTTSEEEECSSCEECTTCEECTTCEECSSCEECTTCEECTTCEECSSCEECTTCEECTT
T ss_pred ECCCeEECCceEECccc---ccCCCceEEccCcEEeeeeEEcccEEECCCcEEcCCcEECCCcEECCCeEEcCCCEECCC
Confidence 443 2222222221110 001112667777776 566666777777777776666666666666666666662
Q ss_pred EEEcCCCEeCCCccC
Q 044626 415 VVIIHGAEIADGSII 429 (429)
Q Consensus 415 ~~i~~~~~i~~~~vv 429 (429)
+.|+++++|+++++|
T Consensus 165 v~Ig~~~~i~~~svV 179 (265)
T 4e6u_A 165 CKIDSYSMIGGASLI 179 (265)
T ss_dssp CEECTTCEECTTCEE
T ss_pred cEECCCCEEcCCCEE
Confidence 556666666666653
No 63
>3tv0_A Dynactin subunit 6; LEFT-handed beta-helix, ARP11, cytosol, structural; 2.15A {Homo sapiens}
Probab=99.57 E-value=1.5e-14 Score=128.05 Aligned_cols=133 Identities=14% Similarity=0.087 Sum_probs=82.6
Q ss_pred CCCCceecCCccCCCeEEeeeEeeCeEECCCcEEcc-eEee----CcEEcCCcEECCCCEEecCeEECCccccccccccc
Q 044626 281 DRDCPVYTMPRCLPPTMIREAVIRDSVVGDGCIINR-CKIK----GTVIGMRTRIGDGAVIEDSVIMGADFYQQGEDIQS 355 (429)
Q Consensus 281 ~~~~~~~~~~~i~~~~~i~~~~i~~~~ig~~~~i~~-~~v~----~~~ig~~~~ig~~~~i~~~~~~~~~~~~~~~~~~~ 355 (429)
+++..|++++.|++.+.|. +++.||++|+|++ +.+. +++||++|.|++++.|.++........... ...
T Consensus 10 ~~~v~I~~~a~I~~~a~I~----g~V~IG~~~~I~~~~~I~~~~g~i~IG~~~~I~~~~~I~~~~~~~~~~~~~~--~~~ 83 (194)
T 3tv0_A 10 QKSVKIAPGAVVCVESEIR----GDVTIGPRTVIHPKARIIAEAGPIVIGEGNLIEEQALIINAYPDNITPDTED--PEP 83 (194)
T ss_dssp --CEEECTTCEECTTSEEE----SSEEECTTCEECTTCEEEESSSCEEECTTCEECTTCEEEECCCSCC-----------
T ss_pred CCCCEECCCCEEcCCCEEe----CCCEECCCCEECCCCEEccCCCCeEECCCccccCCccccccccccccccccc--CcC
Confidence 4455666666666766665 5788899999988 7774 478999999999998876543221000000 000
Q ss_pred CCccccCCcceeEeCCCCeecceEEecCcEECCCcEEecCCCCCCCeeecCCeEEccCEEEEcCCCEeCCCccC
Q 044626 356 SGKCINHKAIPVGIGEDTQIKKAVIDKNARIGKNVLIINKDGVQEGDREANGYIISEGIVVIIHGAEIADGSII 429 (429)
Q Consensus 356 ~~~~~~~~~~~~~ig~~~~i~~~~ig~~~~ig~~~~i~~~~~~~~~~~~~~~~~i~~~~~~i~~~~~i~~~~vv 429 (429)
.. ...+..+.|+.++.+.++.||++|.||++++|. .+.++|++|+|+++ ++|.+++.|+++++|
T Consensus 84 ~~---~~Ig~~~~i~~~~~i~~~~Ig~~~~Ig~~~~I~------~gv~IG~~~~Igag-svV~~~~~Ip~~svv 147 (194)
T 3tv0_A 84 KP---MIIGTNNVFEVGCYSQAMKMGDNNVIESKAYVG------RNVILTSGCIIGAC-CNLNTFEVIPENTVI 147 (194)
T ss_dssp CC---EEECSSCEECTTCEECCSEECSSCEECTTCEEC------TTEEECSSCEECTT-CEECCCEEECTTEEE
T ss_pred Cc---eEECCcceEecceeEeeeeecccceecceeeEC------CeEEECCCCEECCC-CEECCCcEECCCCEE
Confidence 00 001111455666666666677777777777776 56777788888888 677777777777654
No 64
>3ixc_A Hexapeptide transferase family protein; niaid, ssgcid, seattle structural genomics center for infect disease, GRAM-negative bacteria; 1.61A {Anaplasma phagocytophilum}
Probab=99.56 E-value=1.9e-14 Score=127.17 Aligned_cols=119 Identities=18% Similarity=0.307 Sum_probs=92.8
Q ss_pred ceeCCCCceecCCccCCCeEEeeeEeeCeEECCCcEEcc-eEee----CcEEcCCcEECCCCEEec-----CeEECCccc
Q 044626 278 NFYDRDCPVYTMPRCLPPTMIREAVIRDSVVGDGCIINR-CKIK----GTVIGMRTRIGDGAVIED-----SVIMGADFY 347 (429)
Q Consensus 278 ~~~~~~~~~~~~~~i~~~~~i~~~~i~~~~ig~~~~i~~-~~v~----~~~ig~~~~ig~~~~i~~-----~~~~~~~~~ 347 (429)
+++++.+.+++++.|+|++.+. +++.||++|.|++ +.+. +++||++|.|+++|.|.. .+++++.
T Consensus 28 ~~~~~~~~ig~~~~I~~~~~i~----~~v~IG~~~~I~~~~~I~~~~~~i~IG~~~~I~~~~~I~~~~~~g~~~Ig~~-- 101 (191)
T 3ixc_A 28 PYAGVSPSVDSTAFIAGNARII----GDVCIGKNASIWYGTVLRGDVDKIEVGEGTNIQDNTVVHTDSMHGDTVIGKF-- 101 (191)
T ss_dssp CBTTBCCEECTTSEECTTCEEE----EEEEECTTCEECTTCEEEEEEEEEEECTTCEECTTCEECC----CCEEECTT--
T ss_pred cccCCCCEECCCCEECCCCEEe----CCcEECCCCEECCCCEEecCCCCeEECCCCEECCCCEEeecCCcCCeEECCC--
Confidence 4556677788888888888885 4567778888877 7765 459999999999999973 4445542
Q ss_pred ccccccccCCccccCCcceeEeCCCCeecceEEecCcEECCCcEEecCCCCCCCeeecCCeEEccCEEEEcCCCEeCCCc
Q 044626 348 QQGEDIQSSGKCINHKAIPVGIGEDTQIKKAVIDKNARIGKNVLIINKDGVQEGDREANGYIISEGIVVIIHGAEIADGS 427 (429)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~~ig~~~~i~~~~ig~~~~ig~~~~i~~~~~~~~~~~~~~~~~i~~~~~~i~~~~~i~~~~ 427 (429)
+.||+++.+.+++||++|.||+++.|. .+.++|++++|+++ ++|.++..|++++
T Consensus 102 -------------------~~Ig~~~~i~~~~Ig~~~~Ig~~~~I~------~~~~Ig~~~~Ig~g-svV~~~~~i~~~~ 155 (191)
T 3ixc_A 102 -------------------VTIGHSCILHACTLGNNAFVGMGSIVM------DRAVMEEGSMLAAG-SLLTRGKIVKSGE 155 (191)
T ss_dssp -------------------CEECTTCEECSCEECTTCEECTTCEEC------TTCEECTTCEECTT-CEECTTCEECTTE
T ss_pred -------------------CEECCCCEEECCEECCCCEECCCCEEe------CCeEECCCCEECCC-CEECCCcCcCCCe
Confidence 889999999999999999999999997 45667777777777 6777777777776
Q ss_pred c
Q 044626 428 I 428 (429)
Q Consensus 428 v 428 (429)
+
T Consensus 156 ~ 156 (191)
T 3ixc_A 156 L 156 (191)
T ss_dssp E
T ss_pred E
Confidence 5
No 65
>1xhd_A Putative acetyltransferase/acyltransferase; structural genomics, protein structure initiative, medwest C structural genomics, MCSG; 1.90A {Bacillus cereus} SCOP: b.81.1.5 PDB: 3vnp_A 2eg0_A
Probab=99.56 E-value=2.1e-14 Score=124.72 Aligned_cols=117 Identities=24% Similarity=0.405 Sum_probs=90.4
Q ss_pred eCCCCceecCCccCCCeEEeeeEeeCeEECCCcEEcc-eEeeC----cEEcCCcEECCCCEEec----CeEECCcccccc
Q 044626 280 YDRDCPVYTMPRCLPPTMIREAVIRDSVVGDGCIINR-CKIKG----TVIGMRTRIGDGAVIED----SVIMGADFYQQG 350 (429)
Q Consensus 280 ~~~~~~~~~~~~i~~~~~i~~~~i~~~~ig~~~~i~~-~~v~~----~~ig~~~~ig~~~~i~~----~~~~~~~~~~~~ 350 (429)
.++.+.+++++.|+|++.+. +++.||++|.|++ +.+.. ++||++|.|+++|.|.. .+++++.
T Consensus 9 ~~~~~~ig~~~~I~~~~~i~----~~v~IG~~~~I~~~~~i~~~~~~v~IG~~~~I~~~~~I~~~~~~~~~Ig~~----- 79 (173)
T 1xhd_A 9 KEKKPKIASSAFIADYVTIT----GDVYVGEESSIWFNTVIRGDVSPTIIGDRVNVQDQCTLHQSPQYPLILEDD----- 79 (173)
T ss_dssp TTBCCEECTTCEECTTCEEE----EEEEECTTCEECTTCEEEEEEEEEEECTTCEECTTCEEECCTTCCEEECTT-----
T ss_pred CCCCCEECCCcEECCCCEEE----CCEEECCCcEEcCCcEEecCCCeEEECCCCEECCCCEEEeCCCCCeEECCC-----
Confidence 34566777777888888775 4678888888888 77753 89999999999999983 4555542
Q ss_pred cccccCCccccCCcceeEeCCCCeecceEEecCcEECCCcEEecCCCCCCCeeecCCeEEccCEEEEcCCCEeCCCcc
Q 044626 351 EDIQSSGKCINHKAIPVGIGEDTQIKKAVIDKNARIGKNVLIINKDGVQEGDREANGYIISEGIVVIIHGAEIADGSI 428 (429)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~ig~~~~i~~~~ig~~~~ig~~~~i~~~~~~~~~~~~~~~~~i~~~~~~i~~~~~i~~~~v 428 (429)
+.|++++.|.+++||++|.||+++.|. .+.++|++++|+++ ++|.++..|+++++
T Consensus 80 ----------------~~Ig~~~~i~~~~Ig~~~~Ig~~~~i~------~~~~Ig~~~~Ig~~-s~V~~~~~i~~~~v 134 (173)
T 1xhd_A 80 ----------------VTVGHQVILHSCHIKKDALIGMGSIIL------DGAEIGEGAFIGAG-SLVSQGKKIPPNTL 134 (173)
T ss_dssp ----------------CEECTTCEEESCEECTTCEECTTCEEC------TTCEECTTCEECTT-CEECTTCEECTTEE
T ss_pred ----------------CEECCCCEEeCCEECCCCEEcCCCEEc------CCCEECCCCEECCC-CEECCCcEeCCCCE
Confidence 889999999999999999999999987 45666777777777 56666666666654
No 66
>1qre_A Carbonic anhydrase; beta-helix, lyase; 1.46A {Methanosarcina thermophila} SCOP: b.81.1.5 PDB: 1qq0_A 1qrf_A 1qrg_A 1qrm_A 1qrl_A 1thj_A 3otm_A 3ow5_A 3ou9_A 3otz_A 3oup_A
Probab=99.56 E-value=1.8e-14 Score=132.60 Aligned_cols=137 Identities=18% Similarity=0.296 Sum_probs=90.8
Q ss_pred HHhHhhhcccCCC--cceeCCCCceecCCccCCCeEEeeeEeeCeEECCCcEEcc-eEee-C----cEEcCCcEECCCCE
Q 044626 264 HANMECIKRSNMR--YNFYDRDCPVYTMPRCLPPTMIREAVIRDSVVGDGCIINR-CKIK-G----TVIGMRTRIGDGAV 335 (429)
Q Consensus 264 ~an~~~l~~~~~~--~~~~~~~~~~~~~~~i~~~~~i~~~~i~~~~ig~~~~i~~-~~v~-~----~~ig~~~~ig~~~~ 335 (429)
++|..++.+. ++ ....+....+++++.|+|++.+. +++.||++|.|++ +.+. + ++||++|.|+++|.
T Consensus 39 ~~~~~~~~~~-p~~~~~~~~~~~~I~~~~~I~~~a~I~----g~v~IG~~~~I~~~~~I~~~~~~~i~IG~~~~Ig~~~~ 113 (247)
T 1qre_A 39 VDEFSNIREN-PVTPWNPEPSAPVIDPTAYIDPQASVI----GEVTIGANVMVSPMASIRSDEGMPIFVGDRSNVQDGVV 113 (247)
T ss_dssp CCCCCSEECC-CCBTTBSSCCCCEECTTCEECTTCEEE----ESEEECTTCEECTTCEEEESSSCCEEECTTCEECTTCE
T ss_pred hhhhhhccCC-CCccccccCCCcEECCCcEECCCCEEe----CCcEECCCCEECCCcEEecCCCCCEEECCCCEECCCeE
Confidence 3444444433 22 33445666777888888887775 5677888888887 7664 2 38999999999999
Q ss_pred EecC-----------------------eEECCcccccccccccCCccccCCcceeEeCCCCeecc-eEEecCcEECCCcE
Q 044626 336 IEDS-----------------------VIMGADFYQQGEDIQSSGKCINHKAIPVGIGEDTQIKK-AVIDKNARIGKNVL 391 (429)
Q Consensus 336 i~~~-----------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~~~i~~-~~ig~~~~ig~~~~ 391 (429)
|... ++++++ +.||++|.|.+ ++||++|.||++++
T Consensus 114 I~~~~~~~~~g~~~~~~~~~~~~~~~~v~IG~~---------------------v~Ig~~~~I~~~~~Ig~~v~IG~~a~ 172 (247)
T 1qre_A 114 LHALETINEEGEPIEDNIVEVDGKEYAVYIGNN---------------------VSLAHQSQVHGPAAVGDDTFIGMQAF 172 (247)
T ss_dssp EEECCSBCTTSCBCGGGCEEETTEEESEEECTT---------------------CEECTTCEEEEEEEECTTCEECTTCE
T ss_pred EEecccccccCcccccceeeccCccCceEECCC---------------------CEECCCCEEcCCcEECCCCEECCCCE
Confidence 9754 334332 67888888866 88999999999998
Q ss_pred EecCCCCCCCeeecCCeEEccCEEEEcCCCEeCCCccC
Q 044626 392 IINKDGVQEGDREANGYIISEGIVVIIHGAEIADGSII 429 (429)
Q Consensus 392 i~~~~~~~~~~~~~~~~~i~~~~~~i~~~~~i~~~~vv 429 (429)
|.+ ..+++++.+|.+++| .+ +.|++++.++++++|
T Consensus 173 I~~-v~Ig~~~~IgagsvV-~~-~~I~~~~~v~~g~vv 207 (247)
T 1qre_A 173 VFK-SKVGNNCVLEPRSAA-IG-VTIPDGRYIPAGMVV 207 (247)
T ss_dssp EEE-EEECTTCEECTTCEE-ES-CEECTTBEECTTCEE
T ss_pred Eec-eEECCCCEECCCCEE-CC-eEeCCCCEECCCCEE
Confidence 874 333444444444444 33 345777777777653
No 67
>3r1w_A Carbonic anhydrase; beta-helix, lyase; 1.73A {Unidentified}
Probab=99.55 E-value=3.1e-14 Score=125.51 Aligned_cols=118 Identities=24% Similarity=0.382 Sum_probs=91.1
Q ss_pred eCCCCceecCCccCCCeEEeeeEeeCeEECCCcEEcc-eEee----CcEEcCCcEECCCCEEecC-----------eEEC
Q 044626 280 YDRDCPVYTMPRCLPPTMIREAVIRDSVVGDGCIINR-CKIK----GTVIGMRTRIGDGAVIEDS-----------VIMG 343 (429)
Q Consensus 280 ~~~~~~~~~~~~i~~~~~i~~~~i~~~~ig~~~~i~~-~~v~----~~~ig~~~~ig~~~~i~~~-----------~~~~ 343 (429)
....+.+++++.|+|++.+. .++.||++|.|++ +.+. +++||++|.|++++.|..+ ++++
T Consensus 16 ~~~~~~ig~~~~I~~~~~i~----~~v~IG~~~~I~~~~~i~~~~~~i~IG~~~~I~~~~~I~~~~~~~~~~~~~~~~Ig 91 (189)
T 3r1w_A 16 QGISPKLGERVFVDRSSVII----GDVELGDDCSVWPLAVIRGDMHHIRIGARTSVQDGSVLHITHASDYNPGGYPLIIG 91 (189)
T ss_dssp TTBCCEECTTCEECTTCEEE----EEEEECTTCEECTTCEEEEEEEEEEECTTCEECTTCEEECBCCSSSSTTCBCEEEC
T ss_pred cCcCCEECCCcEECCCCEEe----eeeEECCCCEECCCCEEecCCCceEECCCCEECCCCEEecCCcccCCCCCCCeEEC
Confidence 34556778888888888885 4677888888887 7764 3599999999999999774 4455
Q ss_pred CcccccccccccCCccccCCcceeEeCCCCeecceEEecCcEECCCcEEecCCCCCCCeeecCCeEEccCEEEEcCCCEe
Q 044626 344 ADFYQQGEDIQSSGKCINHKAIPVGIGEDTQIKKAVIDKNARIGKNVLIINKDGVQEGDREANGYIISEGIVVIIHGAEI 423 (429)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~~~~~~~~ig~~~~i~~~~ig~~~~ig~~~~i~~~~~~~~~~~~~~~~~i~~~~~~i~~~~~i 423 (429)
+. +.||+++.|.+++||++|.||++++|. .+.++|++++|+++ ++|.++..|
T Consensus 92 ~~---------------------~~Ig~~~~i~~~~Ig~~~~Ig~~~~i~------~~v~Ig~~~~Ig~~-s~V~~g~~i 143 (189)
T 3r1w_A 92 DD---------------------VTIGHQAMLHGCTIGNRVLIGMKSMIM------DGAIVEDEVIVAAG-ATVSPGKVL 143 (189)
T ss_dssp SS---------------------EEECTTCEEESCEECSSEEECTTCEEC------TTCEECSSCEECTT-CEECTTCEE
T ss_pred CC---------------------CEECCCCEEeCcEECCCcEECCCCEEc------CCCEECCCCEEccC-CEECCCCEe
Confidence 42 889999999889999999999999987 55667777777777 677777777
Q ss_pred CCCccC
Q 044626 424 ADGSII 429 (429)
Q Consensus 424 ~~~~vv 429 (429)
++++++
T Consensus 144 ~~~~vv 149 (189)
T 3r1w_A 144 ESGFVY 149 (189)
T ss_dssp CTTEEE
T ss_pred CCCCEE
Confidence 777653
No 68
>1v3w_A Ferripyochelin binding protein; beta-helix, carbonic anhydrase, structural genomics, riken S genomics/proteomics initiative, RSGI, lyase; 1.50A {Pyrococcus horikoshii} SCOP: b.81.1.5 PDB: 1v67_A 2fko_A
Probab=99.55 E-value=4.3e-14 Score=122.75 Aligned_cols=116 Identities=21% Similarity=0.313 Sum_probs=86.1
Q ss_pred CCCCceecCCccCCCeEEeeeEeeCeEECCCcEEcc-eEeeC----cEEcCCcEECCCCEEecC----eEECCccccccc
Q 044626 281 DRDCPVYTMPRCLPPTMIREAVIRDSVVGDGCIINR-CKIKG----TVIGMRTRIGDGAVIEDS----VIMGADFYQQGE 351 (429)
Q Consensus 281 ~~~~~~~~~~~i~~~~~i~~~~i~~~~ig~~~~i~~-~~v~~----~~ig~~~~ig~~~~i~~~----~~~~~~~~~~~~ 351 (429)
++.+.+++++.++|++.+. +++.||++|.|++ +.+.. ++||++|.|+++|.|... +++++.
T Consensus 8 ~~~~~i~~~~~I~~~a~i~----g~v~IG~~~~I~~~~~i~~~~~~~~IG~~~~I~~~~~I~~~~~~~~~Ig~~------ 77 (173)
T 1v3w_A 8 GKKPRIHPSAFVDENAVVI----GDVVLEEKTSVWPSAVLRGDIEQIYVGKYSNVQDNVSIHTSHGYPTEIGEY------ 77 (173)
T ss_dssp TBCCEECTTCEECTTSEEE----EEEEECTTCEECTTCEEEEEEEEEEECTTCEECTTCEEECBTTBCEEECSS------
T ss_pred CCCCEECCCCEECCCCEEe----CCEEECCCCEECCCeEEecCCceEEECCCCEECCCcEEEecCCCCeEECCC------
Confidence 3455677777777887775 4667888888877 77753 899999999999999853 556543
Q ss_pred ccccCCccccCCcceeEeCCCCeecceEEecCcEECCCcEEecCCCCCCCeeecCCeEEccCEEEEcCCCEeCCCcc
Q 044626 352 DIQSSGKCINHKAIPVGIGEDTQIKKAVIDKNARIGKNVLIINKDGVQEGDREANGYIISEGIVVIIHGAEIADGSI 428 (429)
Q Consensus 352 ~~~~~~~~~~~~~~~~~ig~~~~i~~~~ig~~~~ig~~~~i~~~~~~~~~~~~~~~~~i~~~~~~i~~~~~i~~~~v 428 (429)
+.|++++.|.+++||++|.||+++.|.+ +.++|++++|+++ ++|.++..|+++++
T Consensus 78 ---------------~~I~~~~~i~~~~Ig~~~~Ig~~~~i~~------~~~Ig~~~~Ig~~-s~V~~~~~i~~~~~ 132 (173)
T 1v3w_A 78 ---------------VTIGHNAMVHGAKVGNYVIIGISSVILD------GAKIGDHVIIGAG-AVVPPNKEIPDYSL 132 (173)
T ss_dssp ---------------CEECTTCEEESCEECSSEEECTTCEECT------TCEECSSEEECTT-CEECTTCEECTTEE
T ss_pred ---------------CEECCCCEECCCEECCCCEECCCCEEeC------CCEECCCCEECCC-CEECCCcEeCCCcE
Confidence 8899999999999999999999999874 4555666666666 45555555555544
No 69
>3r3r_A Ferripyochelin binding protein; structural genomics, csgid, center for structural genomics O infectious diseases, all beta protein; 1.20A {Salmonella enterica subsp} SCOP: b.81.1.0 PDB: 3tio_A 3tis_A
Probab=99.54 E-value=4.7e-14 Score=124.16 Aligned_cols=117 Identities=20% Similarity=0.332 Sum_probs=90.2
Q ss_pred eCCCCceecCCccCCCeEEeeeEeeCeEECCCcEEcc-eEee-C---cEEcCCcEECCCCEEe-----------cCeEEC
Q 044626 280 YDRDCPVYTMPRCLPPTMIREAVIRDSVVGDGCIINR-CKIK-G---TVIGMRTRIGDGAVIE-----------DSVIMG 343 (429)
Q Consensus 280 ~~~~~~~~~~~~i~~~~~i~~~~i~~~~ig~~~~i~~-~~v~-~---~~ig~~~~ig~~~~i~-----------~~~~~~ 343 (429)
..+.+.+++++.|+|++.+. +++.||++|.|++ +.+. + ++||++|.|+++|.|. ..++++
T Consensus 12 ~~~~~~ig~~~~I~~~~~i~----~~v~IG~~~~I~~~~~i~~~~~~i~IG~~~~I~~~~~I~~~~~~~~~~~~~~~~Ig 87 (187)
T 3r3r_A 12 KNLFPGIGQRVMIDTSSVVI----GDVRLADDVGIWPLVVIRGDVNYVAIGARTNIQDGSVLHVTHKSSSNPHGNPLIIG 87 (187)
T ss_dssp TTBCCEECTTCEECTTCEEE----EEEEECTTCEECTTCEEEEEEEEEEECTTCEECTTCEEECBCCBTTBC-CBCEEEC
T ss_pred cccCcccCCCeEECCCCEEE----CceEECCCCEECCCcEEEcCCccEEECCCCEECCCCEEecCCccccCCCCCCeEEC
Confidence 34556777888888888775 4667788888877 7665 3 5999999999999993 445555
Q ss_pred CcccccccccccCCccccCCcceeEeCCCCeecceEEecCcEECCCcEEecCCCCCCCeeecCCeEEccCEEEEcCCCEe
Q 044626 344 ADFYQQGEDIQSSGKCINHKAIPVGIGEDTQIKKAVIDKNARIGKNVLIINKDGVQEGDREANGYIISEGIVVIIHGAEI 423 (429)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~~~~~~~~ig~~~~i~~~~ig~~~~ig~~~~i~~~~~~~~~~~~~~~~~i~~~~~~i~~~~~i 423 (429)
+. +.||+++.|.+++||++|.||++++|. .+.++|++++|+++ ++|.++..|
T Consensus 88 ~~---------------------~~Ig~~~~i~~~~Ig~~~~Ig~~~~I~------~~~~Ig~~~~Ig~~-s~V~~~~~i 139 (187)
T 3r3r_A 88 ED---------------------VTVGHKVMLHGCTIGNRVLVGMGSIVL------DGAIIEDDVMIGAG-SLVPQHKRL 139 (187)
T ss_dssp SS---------------------CEECTTCEEESCEECSSEEECTTCEEC------TTCEECSSEEECTT-CEECTTCEE
T ss_pred CC---------------------CEECCCCEEeCcEECCCCEECCCCEEC------CCCEECCCCEECCC-CEECCCcCc
Confidence 42 789999999999999999999999997 45667777777777 677777777
Q ss_pred CCCcc
Q 044626 424 ADGSI 428 (429)
Q Consensus 424 ~~~~v 428 (429)
+++++
T Consensus 140 ~~~~v 144 (187)
T 3r3r_A 140 ESGYL 144 (187)
T ss_dssp CTTEE
T ss_pred CCCcE
Confidence 77765
No 70
>4eqy_A Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosam acyltransferase; ssgcid, beta helix, structural genomics, seattle structural center for infectious disease, transferase; 1.80A {Burkholderia thailandensis}
Probab=99.54 E-value=5e-14 Score=132.23 Aligned_cols=99 Identities=19% Similarity=0.306 Sum_probs=52.0
Q ss_pred CeEECCCcEEcc-eEe-------------eCcEEcCCcEECCCCEEecC-------eEECCc-ccccccccccCCccccC
Q 044626 305 DSVVGDGCIINR-CKI-------------KGTVIGMRTRIGDGAVIEDS-------VIMGAD-FYQQGEDIQSSGKCINH 362 (429)
Q Consensus 305 ~~~ig~~~~i~~-~~v-------------~~~~ig~~~~ig~~~~i~~~-------~~~~~~-~~~~~~~~~~~~~~~~~ 362 (429)
++.||++|.|++ +.+ .+++||++|.|+++|.|..+ ++++++ .+..+..+. +
T Consensus 70 ~~~IG~~~~I~~~a~Ig~~~~~~~~~g~~~~v~IG~~~~Ig~~~~I~~g~~~~~~~~~IG~~~~I~~~~~I~-------~ 142 (283)
T 4eqy_A 70 HTTIGEDNRIGHYASVGGRPQDMKYKDEPTRLVIGDRNTIREFTTIHTGTVQDAGVTTLGDDNWIMAYVHIG-------H 142 (283)
T ss_dssp EEEECSSCEECTTEEEEECCCCTTCCCCCCEEEECSSCEECTTEEEECCCTTTTSEEEECSSCEECTTCEEC-------T
T ss_pred CcEECCCcEEcCCcEECCCCccccccCCCceEEECCCcccCcceeEccceecCCCceEECCCcEECceeEEc-------C
Confidence 466666666666 555 24666666666666666542 333321 111111100 1
Q ss_pred CcceeEeCCCCee-cceEEecCcEECCCcEEecCCCCCCCeeecCCeEEccC
Q 044626 363 KAIPVGIGEDTQI-KKAVIDKNARIGKNVLIINKDGVQEGDREANGYIISEG 413 (429)
Q Consensus 363 ~~~~~~ig~~~~i-~~~~ig~~~~ig~~~~i~~~~~~~~~~~~~~~~~i~~~ 413 (429)
.+.||+++.| .++.+..+++||++|.|+.+..+..+.++|++++|+++
T Consensus 143 ---~~~IG~~v~i~~~~~i~~~v~Igd~~~Ig~~a~V~~~v~Ig~~~vvg~~ 191 (283)
T 4eqy_A 143 ---DCRVGSHVVLSSNAQMAGHVEIGDWAIVGGMSGVHQYVRIGAHSMLGGA 191 (283)
T ss_dssp ---TCEECSSCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECTT
T ss_pred ---CcEECCCcEECCCceEcCCcEECCCeEEecCCEEcCCeEECCCcEECCC
Confidence 1455555555 44555555555555555555555566666666666666
No 71
>1e5k_A Molybdopterin-guanine dinucleotide biosynthesis protein A; molybdopterin nucleotidyl-transferase,; HET: CIT; 1.35A {Escherichia coli} SCOP: c.68.1.8 PDB: 1h4e_A* 1hjl_A* 1hjj_A* 1h4c_A* 1h4d_A* 1fr9_A 1frw_A*
Probab=99.54 E-value=4.3e-14 Score=125.89 Aligned_cols=109 Identities=16% Similarity=0.172 Sum_probs=82.1
Q ss_pred CeEEEEEcCCCCCCcccccccccccccccCCcchhHHHHHHhhHhcCCCeEEEEeecChhHHHHHHhccccCcccCCCCc
Q 044626 1 SVAAVVFGDGSESRLYPLTKRRSEGAIPLAANYRLVDAVVSNCINSNINKIYALTQFNSTSLNLHLSRAFSGILRGKDGF 80 (429)
Q Consensus 1 ~m~avIla~G~gsRl~plt~~~pK~Llpi~g~~plI~~~i~~l~~~gi~~I~Iv~~~~~~~i~~~l~~~~~~~~~~~~~~ 80 (429)
+|.|||||||.|+||+ ..||+|+|++|+ |||+|+++.+.. ++++|+|+++++.+.+. + ++.
T Consensus 6 ~~~~iILAgG~s~Rmg----~~~K~ll~i~G~-pli~~~l~~l~~-~~~~ivvv~~~~~~~~~----~----~~~----- 66 (201)
T 1e5k_A 6 TITGVVLAGGKARRMG----GVDKGLLELNGK-PLWQHVADALMT-QLSHVVVNANRHQEIYQ----A----SGL----- 66 (201)
T ss_dssp SEEEEEECCCCCSSSC----SSCGGGSEETTE-EHHHHHHHHHHH-HCSCEEEECSSSHHHHH----T----TSC-----
T ss_pred cceEEEEcCCCCCcCC----CCCCceeeECce-eHHHHHHHHHHh-hCCEEEEEcCCcHHHHh----h----cCC-----
Confidence 4689999999999997 379999999999 999999999985 58999999987654331 1 122
Q ss_pred EEEEeccccccccCcccCcHHHHHHHHHHhhcCCCCeEEEEcCce-eE-eccHHHHHHH
Q 044626 81 VEVIAAYQSLEDQDWFQGNADAIRRCLWVLEEYPVTEFLILPGHH-LY-KMDYQRLIEA 137 (429)
Q Consensus 81 v~i~~~~~~~~~~~~~~Gt~~al~~~~~~i~~~~~~~~lvl~gD~-i~-~~~l~~~~~~ 137 (429)
.++..... + ..|+.++++.+++.+. .+.+++++||+ +. ...+..+++.
T Consensus 67 -~~v~~~~~--~---~~G~~~si~~~l~~~~---~~~vlv~~~D~P~i~~~~i~~l~~~ 116 (201)
T 1e5k_A 67 -KVIEDSLA--D---YPGPLAGMLSVMQQEA---GEWFLFCPCDTPYIPPDLAARLNHQ 116 (201)
T ss_dssp -CEECCCTT--C---CCSHHHHHHHHHHHCC---SSEEEEEETTCTTCCTTHHHHHHHT
T ss_pred -eEEecCCC--C---CCCHHHHHHHHHHhCC---CCcEEEEeCCcCcCCHHHHHHHHhh
Confidence 13211110 0 1599999999998875 38899999999 55 5556777765
No 72
>3r0s_A Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosam acyltransferase; structural genomics; 2.30A {Campylobacter jejuni subsp} SCOP: b.81.1.0
Probab=99.53 E-value=8.2e-14 Score=129.55 Aligned_cols=99 Identities=19% Similarity=0.324 Sum_probs=53.9
Q ss_pred CeEECCCcEEcc-eEe--------------eCcEEcCCcEECCCCEEecC-------eEECCc-ccccccccccCCcccc
Q 044626 305 DSVVGDGCIINR-CKI--------------KGTVIGMRTRIGDGAVIEDS-------VIMGAD-FYQQGEDIQSSGKCIN 361 (429)
Q Consensus 305 ~~~ig~~~~i~~-~~v--------------~~~~ig~~~~ig~~~~i~~~-------~~~~~~-~~~~~~~~~~~~~~~~ 361 (429)
++.||++|.|++ +.+ .+++||++|.|++++.|..+ +.+++. +++.+..+ .
T Consensus 52 ~~~IG~~~~I~~~a~I~~~~~~~~~~g~~~~~v~IG~~~~Ig~~~~I~~~~~~~~~~~~IG~~~~I~~~~~I-------~ 124 (266)
T 3r0s_A 52 DTTIGDHSRVFSYAIVGDIPQDISYKEEQKSGVVIGKNATIREFATINSGTAKGDGFTRIGDNAFIMAYCHI-------A 124 (266)
T ss_dssp SCEECTTCEECTTCEEEECCSCSCCC----CEEEECTTCEECTTCEEECCCTTTTSEEEECTTCEECTTCEE-------C
T ss_pred CcEECCCcEEccCceeccCCccccccCCcCceEEECCCCEECCceEecCCcccCCccEEECCCceeCCcceE-------c
Confidence 677777777777 666 46777777777777777643 333331 11111100 0
Q ss_pred CCcceeEeCCCCee-cceEEecCcEECCCcEEecCCCCCCCeeecCCeEEccC
Q 044626 362 HKAIPVGIGEDTQI-KKAVIDKNARIGKNVLIINKDGVQEGDREANGYIISEG 413 (429)
Q Consensus 362 ~~~~~~~ig~~~~i-~~~~ig~~~~ig~~~~i~~~~~~~~~~~~~~~~~i~~~ 413 (429)
+ .+.||+++.+ .++.++.+++||++|.|+.+..+..+.++|++++|+++
T Consensus 125 ~---~~~IG~~~~i~~~~~i~~~v~Igd~~~Ig~~a~V~~~v~Ig~~a~Vg~~ 174 (266)
T 3r0s_A 125 H---DCLLGNNIILANNATLAGHVELGDFTVVGGLTPIHQFVKVGEGCMIAGA 174 (266)
T ss_dssp T---TCEECSSCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECSS
T ss_pred c---ccccCCCeEECCCceecCCeEECCCcEEccCCEECCCcEECCCCEEccC
Confidence 1 1445555555 44455555555555555555555555666666666666
No 73
>4e6u_A Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosam acyltransferase; lipopolysaccaride synthesis; 1.41A {Acinetobacter baumannii} PDB: 4e6t_A*
Probab=99.52 E-value=1.1e-13 Score=128.63 Aligned_cols=46 Identities=13% Similarity=0.250 Sum_probs=21.3
Q ss_pred EeCCCCee-cceEEecCcEECCCcEEecCCCCCCCeeecCCeEEccC
Q 044626 368 GIGEDTQI-KKAVIDKNARIGKNVLIINKDGVQEGDREANGYIISEG 413 (429)
Q Consensus 368 ~ig~~~~i-~~~~ig~~~~ig~~~~i~~~~~~~~~~~~~~~~~i~~~ 413 (429)
.||+++.| .++.+..+++||++|.|+.+..+..+.++|++++|+++
T Consensus 130 ~Ig~~~~i~~~~~i~~~v~Igd~~~Ig~~a~V~~~v~Ig~~~~i~~~ 176 (265)
T 4e6u_A 130 IVGDHNIFANNVGVAGHVHIGDHVIVGGNSGIHQFCKIDSYSMIGGA 176 (265)
T ss_dssp EECSSCEECTTCEECTTCEECSSCEECTTCEECTTCEECTTCEECTT
T ss_pred EECCCcEEcCCcEECCCcEECCCeEEcCCCEECCCcEECCCCEEcCC
Confidence 34444444 33444444444444444444444444555555555555
No 74
>1j2z_A Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosam acyltransferase; UDP-N-acetylglucosamine acyltransferase, LPXA, LEFT-handed B structure; HET: SOG TLA; 2.10A {Helicobacter pylori} SCOP: b.81.1.1
Probab=99.52 E-value=1.1e-13 Score=128.80 Aligned_cols=128 Identities=16% Similarity=0.189 Sum_probs=76.8
Q ss_pred CCCCceecCCccCCCeEE-eeeEee-CeEECCCcEEcc-eEe-------------eCcEEcCCcEECCCCEEecC-----
Q 044626 281 DRDCPVYTMPRCLPPTMI-REAVIR-DSVVGDGCIINR-CKI-------------KGTVIGMRTRIGDGAVIEDS----- 339 (429)
Q Consensus 281 ~~~~~~~~~~~i~~~~~i-~~~~i~-~~~ig~~~~i~~-~~v-------------~~~~ig~~~~ig~~~~i~~~----- 339 (429)
++.+.+++++.|+++++| .++.|. ++.||++|.|++ +.+ .+++||++|.|++++.|..+
T Consensus 23 g~~~~I~~~v~IG~~~~I~~~~~I~g~~~IG~~~~I~~~~~Ig~~~~~~~~~g~~~~~~IG~~~~I~~~~~I~~~~~~~~ 102 (270)
T 1j2z_A 23 GEFCVIGDGVKLDEGVKLHNNVTLQGHTFVGKNTEIFPFAVLGTQPQDLKYKGEYSELIIGEDNLIREFCMINPGTEGGI 102 (270)
T ss_dssp CTTCEECTTCEECTTCEECTTCEECSEEEECTTCEECTTCEESCCCSCSSCCSCCCEEEECSSCEECTTCEECCCCTTTT
T ss_pred CCCCEECCCCEECCCCEEcCCcEEeCCeEEcCCCEEEeeeEECcCCccccccCCccceEECCCCEECCCeEEcCCeecCC
Confidence 333333334444444444 344443 678888888887 766 35777888888888877643
Q ss_pred --eEECCcccccccccccCCccccCCcceeEeCCCCee-cceEEecCcEECCCcEEecCCCCCCCeeecCCeEEccCEEE
Q 044626 340 --VIMGADFYQQGEDIQSSGKCINHKAIPVGIGEDTQI-KKAVIDKNARIGKNVLIINKDGVQEGDREANGYIISEGIVV 416 (429)
Q Consensus 340 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~~~i-~~~~ig~~~~ig~~~~i~~~~~~~~~~~~~~~~~i~~~~~~ 416 (429)
+.+++ +.....-. .+.++ +.||+++.| .++.++.+++||+++.|+.+..+..+.++|++++|+++ ++
T Consensus 103 ~~~~IG~-----~~~I~~~~-~I~~~---~~IG~~~~I~~~~~i~~~v~Igd~~~Ig~~a~V~~~v~IG~~a~Ig~~-s~ 172 (270)
T 1j2z_A 103 KKTLIGD-----KNLLMAYV-HVAHD---CVIGSHCILANGVTLAGHIEIGDYVNIGGLTAIHQFVRIAKGCMIAGK-SA 172 (270)
T ss_dssp SEEEECS-----SCEECTTC-EECTT---CEECSSCEECTTCEECTTCEECSSCEECTTCEECTTCEECTTCEECTT-CE
T ss_pred ccEEECC-----CcEECccc-ccCCC---cEECCCcEEcCCccccCccEECCCeEEecCCEECCCcEeCCceEEecC-cE
Confidence 33332 11111110 01111 567777777 56667777777777777777777777788888888877 44
Q ss_pred Ec
Q 044626 417 II 418 (429)
Q Consensus 417 i~ 418 (429)
|.
T Consensus 173 V~ 174 (270)
T 1j2z_A 173 LG 174 (270)
T ss_dssp EC
T ss_pred ec
Confidence 43
No 75
>3mqg_A Lipopolysaccharides biosynthesis acetyltransferas; beta helix, acetyl transferase, transferase; HET: ACO U5P UDP PE4; 1.43A {Bordetella petrii} PDB: 3mqh_A*
Probab=99.51 E-value=6.6e-14 Score=123.74 Aligned_cols=65 Identities=20% Similarity=0.282 Sum_probs=31.0
Q ss_pred eCCCCceecCCccCCCeEE-eeeEe-eCeEECCCcEEcc-eEee-CcEEcCCcEECCCCEEecCeEECC
Q 044626 280 YDRDCPVYTMPRCLPPTMI-REAVI-RDSVVGDGCIINR-CKIK-GTVIGMRTRIGDGAVIEDSVIMGA 344 (429)
Q Consensus 280 ~~~~~~~~~~~~i~~~~~i-~~~~i-~~~~ig~~~~i~~-~~v~-~~~ig~~~~ig~~~~i~~~~~~~~ 344 (429)
++|++.+.+++.|++++.| +++.+ .++.||++|.|++ +.+. +++||++|.|++++.|.+++.+++
T Consensus 6 I~p~a~I~~~~~Ig~~~~I~~~~~I~~~~~IG~~~~Ig~~~~I~~~~~IG~~~~I~~~~~I~~~~~Ig~ 74 (192)
T 3mqg_A 6 IHPTAIVDEGARIGAHSRIWHWVHICGGAEIGEGCSLGQNVFVGNRVRIGNRVKIQNNVSVYDNVFLED 74 (192)
T ss_dssp ECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECSSCEECSSCEECTTCEECTTEEECT
T ss_pred ECCCcEECCCCEECCCCEECCCCEECCCcEECCCCEECCCEEECCceEECCCcEEcCCcEEeCCCEECC
Confidence 3444444444444443333 22332 3556666666655 4443 355555555555555554444443
No 76
>1w55_A ISPD/ISPF bifunctional enzyme; biosynthetic pathway, isoprenoids, nonmevalonate, transferase; HET: C GPP; 2.3A {Campylobacter jejuni} SCOP: c.68.1.13 d.79.5.1 PDB: 1w57_A*
Probab=99.51 E-value=3.2e-14 Score=137.76 Aligned_cols=196 Identities=14% Similarity=0.118 Sum_probs=126.7
Q ss_pred CeEEEEEcCCCCCCcccccccccccccccCCcchhHHHHHHhhHh-cCCCeEEEEeecChhHHHHHHhccccCcccCCCC
Q 044626 1 SVAAVVFGDGSESRLYPLTKRRSEGAIPLAANYRLVDAVVSNCIN-SNINKIYALTQFNSTSLNLHLSRAFSGILRGKDG 79 (429)
Q Consensus 1 ~m~avIla~G~gsRl~plt~~~pK~Llpi~g~~plI~~~i~~l~~-~gi~~I~Iv~~~~~~~i~~~l~~~~~~~~~~~~~ 79 (429)
+|.|||||||.|+||+ ...||+|+|++|+ |||+|+++.|.+ .++++|+|+++ ..+.+.+++.+
T Consensus 3 ki~aIILAaG~ssRmg---~~~pK~ll~l~Gk-PLi~~~l~~l~~~~~~~~IvVvt~-~~~~i~~~~~~----------- 66 (371)
T 1w55_A 3 EMSLIMLAAGNSTRFN---TKVKKQFLRLGND-PLWLYATKNLSSFYPFKKIVVTSS-NITYMKKFTKN----------- 66 (371)
T ss_dssp CEEEEEECCSCCTTTC---SSSCGGGCEEBTE-EHHHHHHHHHHTTSCCSCEEEEES-CHHHHHTTCSS-----------
T ss_pred ccEEEEECCCCCccCC---CCCCcceEEECCe-EHHHHHHHHHHccCCCCeEEEEcC-CHHHHHHHhCC-----------
Confidence 4679999999999998 3579999999999 999999999988 57999999998 54444433321
Q ss_pred cEEEEeccccccccCcccCcHHHHHHHHHHhhcCCCCeEEEEcCce-eE-eccHHHHHHHHHhcCCceEEEEEeccCCCC
Q 044626 80 FVEVIAAYQSLEDQDWFQGNADAIRRCLWVLEEYPVTEFLILPGHH-LY-KMDYQRLIEAHRNNKADITIVALNAIRDKH 157 (429)
Q Consensus 80 ~v~i~~~~~~~~~~~~~~Gt~~al~~~~~~i~~~~~~~~lvl~gD~-i~-~~~l~~~~~~~~~~~~~~ti~~~~~~~~~~ 157 (429)
+.++ .. ..|..++++.+++.+. .+.+++++||. +. ...+..+++.+.+.+ ..+...+.. +.
T Consensus 67 -v~~v--~~-------g~g~~~sv~~aL~~l~---~d~vlv~~~D~Pli~~~~i~~li~~~~~~~--a~i~~~~~~--d~ 129 (371)
T 1w55_A 67 -YEFI--EG-------GDTRAESLKKALELID---SEFVMVSDVARVLVSKNLFDRLIENLDKAD--CITPALKVA--DT 129 (371)
T ss_dssp -SEEE--EC-------CSSHHHHHHHHHTTCC---SSEEEEEETTCTTCCHHHHHHHHTTGGGCS--EEEEEECCC--SC
T ss_pred -CEEE--eC-------CCChHHHHHHHHHhcC---CCeEEEEeCCcccCCHHHHHHHHHHHHhcC--CEEEEEEee--cC
Confidence 2232 11 1477789999887764 38999999999 54 556788888776543 333333321 11
Q ss_pred CCccEEEEcCCCCEEEEEecCcccccccccCCCCCCCCCCCCCCcce-eeEEEEcHHHHHHHHHhhCCCCcccccccchh
Q 044626 158 PGFGLLRVNPVNQVIEFSMKSERETITSISGKSSRKSDSVASGNFPS-MGIYLINRDTMSRLLKEYLPEATDLGSEVIPA 236 (429)
Q Consensus 158 ~~~g~v~~d~~~~v~~~~ek~~~~~~~~~~~~~~~~~~~~~~~~~~~-~Giy~~~~~~l~~~l~~~~~~~~~~~~d~l~~ 236 (429)
+... .+.+.. +.+.. ..-+.|+++.|.+.++.. . . ..+....
T Consensus 130 ----vk~v---------~~t~~r-------------------~~l~~~~~P~~f~~~~l~~~~~~~---~-~-~td~~~l 172 (371)
T 1w55_A 130 ----TLFD---------NEALQR-------------------EKIKLIQTPQISKTKLLKKALDQN---L-E-FTDDSTA 172 (371)
T ss_dssp ----EEET---------TEEECG-------------------GGCCEECSCEEEEHHHHHHHTSSC---C-C-CSSHHHH
T ss_pred ----eeee---------eeecCc-------------------cceeecCCcceecHHHHHHHHHhc---c-c-ccCHHHH
Confidence 0000 000010 01111 112468887776555321 1 1 2232233
Q ss_pred cccCCceEEEEEecceEEecCCHHHHHHHh
Q 044626 237 AISIGMKVEAYLFDGYWEDMRSIEAFYHAN 266 (429)
Q Consensus 237 l~~~g~~i~~~~~~~~~~~i~t~~~~~~an 266 (429)
+...+.++..++.++.|.+|+||+||..++
T Consensus 173 l~~~g~~V~~v~~~~~~~dIdTpeDL~~Ae 202 (371)
T 1w55_A 173 IAAMGGKIWFVEGEENARKLTFKEDLKKLD 202 (371)
T ss_dssp HHTTTCCEEEEECCGGGCCCCSGGGGGGSC
T ss_pred HHhCCCcEEEEECCccccCCCCHHHHHHHH
Confidence 333456788888788999999999998887
No 77
>3hsq_A Acyl-[acyl-carrier-protein]--UDP-N- acetylglucosamine O-acyltransferase; L.interrogans LPXA, LPXA, LPXA acyltransferase; 2.10A {Leptospira interrogans} SCOP: b.81.1.0 PDB: 3i3a_A* 3i3x_A*
Probab=99.51 E-value=1.4e-13 Score=127.45 Aligned_cols=136 Identities=14% Similarity=0.125 Sum_probs=78.7
Q ss_pred eCCCCceecCCccCCCeEE-eeeEe-eCeEECCCcEEcc-eEe--------------eCcEEcCCcEECCCCEEec----
Q 044626 280 YDRDCPVYTMPRCLPPTMI-REAVI-RDSVVGDGCIINR-CKI--------------KGTVIGMRTRIGDGAVIED---- 338 (429)
Q Consensus 280 ~~~~~~~~~~~~i~~~~~i-~~~~i-~~~~ig~~~~i~~-~~v--------------~~~~ig~~~~ig~~~~i~~---- 338 (429)
+++.+.++.++.|++++.| .++.+ .++.||++|.|++ +.+ .+++||++|.|++++.|..
T Consensus 21 I~~~~~I~~~v~IG~~~~I~~~~~I~~~~~IG~~~~I~~~a~Ig~~~~~~~~~g~~~~~v~IG~~~~Ig~~~~I~~~~~~ 100 (259)
T 3hsq_A 21 VGPYSIIEGNVSIQEGTIIEGHVKICAGSEIGKFNRFHQGAVIGVMPQDLGFNQQLLTKTVIGDHNIFREYSNIHKGTKE 100 (259)
T ss_dssp ECTTCEECSSCEECTTCEECTTCEECTTEEECSSCEECTTCEEEECCSCTTCCTTSCCCEEECSSCEECTTCEEECCSBT
T ss_pred ECCCCEECCCCEECCCCEEcCCcEEcCCcEECCCcEECCCCEECCCcccccccCccCCcEEECCCcEECCCCEECCCccC
Confidence 3333333334444444444 34444 3578888888888 776 3678888888888888863
Q ss_pred --CeEECCcccccccccccCCccccCCcceeEeCCCCee-cceEEecCcEECCCcEEecCCCCCCCeeecCCeEEccCEE
Q 044626 339 --SVIMGADFYQQGEDIQSSGKCINHKAIPVGIGEDTQI-KKAVIDKNARIGKNVLIINKDGVQEGDREANGYIISEGIV 415 (429)
Q Consensus 339 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~~~i-~~~~ig~~~~ig~~~~i~~~~~~~~~~~~~~~~~i~~~~~ 415 (429)
.+.+++ +.....-. .+ +..+.||+++.+ .++.++++++||++|.|+.+..+..+.++|++++|+++ +
T Consensus 101 ~~~~~IG~-----~~~I~~~~-~I---~~~~~IG~~~~i~~~~~i~~~v~Igd~~~Ig~~a~V~~~v~Ig~~~~Vg~~-s 170 (259)
T 3hsq_A 101 DSPTVIGN-----KNYFMGNS-HV---GHDCILGNNNILTHGAVLAGHVTLGNFAFISGLVAVHQFCFVGDYSMVAGL-A 170 (259)
T ss_dssp TBCEEECS-----SCEECTTC-EE---CTTCEECSSCEECTTCEECTTCEECSSCEECSSEEECTTCEECTTCEECSS-E
T ss_pred CCcEEECC-----CcEEcCCc-EE---CCCcEECCccEEcCCceECCccEECCCcEEeCCCEECCCCEECCCCEECCC-C
Confidence 233332 11111100 00 111566666666 56666667777777777776666777788888888888 4
Q ss_pred EEcCCCEeCCCc
Q 044626 416 VIIHGAEIADGS 427 (429)
Q Consensus 416 ~i~~~~~i~~~~ 427 (429)
+|.+ .|++++
T Consensus 171 ~V~~--dvp~~~ 180 (259)
T 3hsq_A 171 KVVQ--DVPPYS 180 (259)
T ss_dssp EECS--BBCTTE
T ss_pred EEcc--cCCCCc
Confidence 5543 245544
No 78
>3ngw_A Molybdopterin-guanine dinucleotide biosynthesis P (MOBA); alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.31A {Archaeoglobus fulgidus}
Probab=99.50 E-value=5.6e-13 Score=119.09 Aligned_cols=115 Identities=15% Similarity=0.114 Sum_probs=84.3
Q ss_pred eEEEEEcCCCCCCcccccccccccccccCCcchhHHHHHHhhHhcCCCeEEEEeecChhHHHHHHhccccCcccCCCCcE
Q 044626 2 VAAVVFGDGSESRLYPLTKRRSEGAIPLAANYRLVDAVVSNCINSNINKIYALTQFNSTSLNLHLSRAFSGILRGKDGFV 81 (429)
Q Consensus 2 m~avIla~G~gsRl~plt~~~pK~Llpi~g~~plI~~~i~~l~~~gi~~I~Iv~~~~~~~i~~~l~~~~~~~~~~~~~~v 81 (429)
|.|||||||.|+||+ .||+|+|++|+ |||+|+++.+... +|+|++++ .+.+. .+.+. ++.
T Consensus 1 m~aiILAgG~s~Rmg-----~~K~ll~~~G~-pli~~~~~~l~~~---~vvvv~~~-~~~~~-~~~~~---~~~------ 60 (208)
T 3ngw_A 1 MKVAVLVGGVGRRIG-----MEKTEVMLCGK-KLIEWVLEKYSPF---QTVFVCRD-EKQAE-KLSSR---YEA------ 60 (208)
T ss_dssp CEEEEECCCCCTTTT-----SCGGGCEETTE-EHHHHHHHHHTTS---EEEEECSS-HHHHH-HHHTT---SCS------
T ss_pred CEEEEECCCchhhCC-----CCCcccEECCe-eHHHHHHHHhcCC---CEEEEECC-HHHHH-HHHHh---cCC------
Confidence 789999999999998 69999999999 9999999999876 89888864 33333 33321 122
Q ss_pred EEEeccccccccCcccCcHHHHHHHHHHhhcCCCCeEEEEcCce-eEe-ccHHHHHHHHHhcCCceEE
Q 044626 82 EVIAAYQSLEDQDWFQGNADAIRRCLWVLEEYPVTEFLILPGHH-LYK-MDYQRLIEAHRNNKADITI 147 (429)
Q Consensus 82 ~i~~~~~~~~~~~~~~Gt~~al~~~~~~i~~~~~~~~lvl~gD~-i~~-~~l~~~~~~~~~~~~~~ti 147 (429)
.++.... +..|..++++.+++.+ . +.+ ++.||+ +.+ ..+..+++.+.+.++++++
T Consensus 61 ~~v~d~~------~~~G~~~si~~gl~~~-~---~~v-v~~~D~P~i~~~~i~~l~~~~~~~~~~~v~ 117 (208)
T 3ngw_A 61 EFIWDLH------KGVGSIAGIHAALRHF-G---SCV-VAAIDMPFVKPEVLEHLYKEGEKAGCDALI 117 (208)
T ss_dssp CEECCTT------CCCSHHHHHHHHHHHH-S---SEE-EEETTCTTCCHHHHHHHHHHHHHHTCSEEE
T ss_pred eEEecCC------CCCChHHHHHHHHHHc-C---CCE-EEECCccCCCHHHHHHHHHHhhcCCCCEEE
Confidence 1332111 1258889999999888 2 788 999999 554 4568888887765555544
No 79
>3kwd_A Carbon dioxide concentrating mechanism protein; LEFT-handed beta helix, gamma carbonic anhydrase, disulfide dependent activity; 1.10A {Thermosynechococcus elongatus} PDB: 3kwe_A 3kwc_A
Probab=99.50 E-value=1.9e-13 Score=122.79 Aligned_cols=114 Identities=27% Similarity=0.312 Sum_probs=77.7
Q ss_pred CceecCCccCCCeEEeeeEeeCeEECCCcEEcc-eEee-----CcEEcCCcEECCCCEEec--------------CeEEC
Q 044626 284 CPVYTMPRCLPPTMIREAVIRDSVVGDGCIINR-CKIK-----GTVIGMRTRIGDGAVIED--------------SVIMG 343 (429)
Q Consensus 284 ~~~~~~~~i~~~~~i~~~~i~~~~ig~~~~i~~-~~v~-----~~~ig~~~~ig~~~~i~~--------------~~~~~ 343 (429)
..+++++.+++.+.+. +++.||++|.|++ +.+. +++||++|.|+++|.|.. .++++
T Consensus 40 ~~i~~~~~I~~~a~i~----~~v~IG~~~~I~~~~~I~~~~~~~v~IG~~~~Ig~~~~I~~~~~~~~ig~~~~~~~~~IG 115 (213)
T 3kwd_A 40 PEIAPTAYVHSFSNLI----GDVRIKDYVHIAPGTSIRADEGTPFHIGSRTNIQDGVVIHGLQQGRVIGDDGQEYSVWIG 115 (213)
T ss_dssp CEECTTCEECTTSEEE----ESEEECTTCEECTTCEEEESSSCCEEECTTCEECTTCEEEECSSCCEECTTSCEESEEEC
T ss_pred CcCCCCCEECCCCEEe----CceEECCCCEEcCCcEEecCCCCceEECCCCEECCCCEEEecCCCceeccCCcccceEEC
Confidence 4455566666666664 4677888888887 7773 478999999999998875 13333
Q ss_pred CcccccccccccCCccccCCcceeEeCCCCeecc-eEEecCcEECCCcEEecCCCCCCCeeecCCeEEccCE----EEEc
Q 044626 344 ADFYQQGEDIQSSGKCINHKAIPVGIGEDTQIKK-AVIDKNARIGKNVLIINKDGVQEGDREANGYIISEGI----VVII 418 (429)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~~~~~~~~ig~~~~i~~-~~ig~~~~ig~~~~i~~~~~~~~~~~~~~~~~i~~~~----~~i~ 418 (429)
+. +.|++++.|.+ +.||++|.||++++|.+ .++|++++|++++ ++|+
T Consensus 116 ~~---------------------v~Ig~~~~I~~~v~Ig~~v~IG~~a~I~~-------~~Ig~~~~Igags~V~~~~i~ 167 (213)
T 3kwd_A 116 DN---------------------VSITHMALIHGPAYIGDGCFIGFRSTVFN-------ARVGAGCVVMMHVLIQDVEIP 167 (213)
T ss_dssp TT---------------------CEECTTCEEEEEEEECTTCEECTTCEEEE-------EEECTTCEECSSCEEESCEEC
T ss_pred CC---------------------cEECCCcEEcCCCEECCCCEECCCCEEeC-------cEECCCCEEcCCCEECCcEeC
Confidence 21 66777777754 88888888888888863 4455555555552 3457
Q ss_pred CCCEeCCCccC
Q 044626 419 HGAEIADGSII 429 (429)
Q Consensus 419 ~~~~i~~~~vv 429 (429)
+++.|+++++|
T Consensus 168 ~~~~v~~~~vv 178 (213)
T 3kwd_A 168 PGKYVPSGMVI 178 (213)
T ss_dssp TTBEECTTCEE
T ss_pred CCCEECCCcEE
Confidence 78888888764
No 80
>3fs8_A QDTC; acetyltransferase, natural product, deoxysugar; HET: ACO; 1.70A {Thermoanaerobacteriumthermosaccharolyticum} PDB: 3fsb_A* 3fsc_A*
Probab=99.48 E-value=2.9e-13 Score=126.48 Aligned_cols=147 Identities=18% Similarity=0.179 Sum_probs=72.3
Q ss_pred cceeCCCCceecCCccCCCeEE-eeeEe-eCeEECCCcEEcc-eEee-C--------------cEEcCCcEECCCCEEec
Q 044626 277 YNFYDRDCPVYTMPRCLPPTMI-REAVI-RDSVVGDGCIINR-CKIK-G--------------TVIGMRTRIGDGAVIED 338 (429)
Q Consensus 277 ~~~~~~~~~~~~~~~i~~~~~i-~~~~i-~~~~ig~~~~i~~-~~v~-~--------------~~ig~~~~ig~~~~i~~ 338 (429)
.+++++++.+++++.|++++.| +++.| .++.||++|.|++ +.+. + ++||++|.|++++.|..
T Consensus 8 ~~~I~~~a~I~~~~~Ig~~~~Ig~~~~I~~~v~Ig~~~~I~~~~~I~~~~~~~~~~~~~~~~~~~Ig~~~~I~~~~~i~~ 87 (273)
T 3fs8_A 8 SAIIKEGVIIGENVTIEDNVYIDYGCIIRDNVHIKKGSFIGARSILGEYLVDFYNDRINKKHPLIIGENALIRTENVIYG 87 (273)
T ss_dssp TCEECTTCEECSSEEECTTCEECTTCEECSSEEECTTCEECTTCEEEECCTTHHHHTCCCCCCEEECTTCEECTTCEEES
T ss_pred CeEECCCcEECCCCEECCCcEECCCCEECCCCEECCCcEECCCcEeCCccccccccccccccceEECCCCEECCCCEEeC
Confidence 3445555555555555555555 34444 4566666666666 5553 2 66666666666666644
Q ss_pred CeEECC-cccccccccc-cCCccccCCcceeEeCCCCee-cceEEecCcEECCCcEEecCCCCC----------------
Q 044626 339 SVIMGA-DFYQQGEDIQ-SSGKCINHKAIPVGIGEDTQI-KKAVIDKNARIGKNVLIINKDGVQ---------------- 399 (429)
Q Consensus 339 ~~~~~~-~~~~~~~~~~-~~~~~~~~~~~~~~ig~~~~i-~~~~ig~~~~ig~~~~i~~~~~~~---------------- 399 (429)
.++++. ..++.+..+. .+. .+..+.|+.++.+ .++.||++|.|++++.|.....+.
T Consensus 88 ~~~Ig~~~~Ig~~~~I~~~~~-----Ig~~~~Ig~~~~i~~~~~IG~~~~I~~~~~I~~~~~ig~~~~i~~~~~i~~~~~ 162 (273)
T 3fs8_A 88 DTIIGDNFQTGHKVTIRENTK-----IGNNVKIGTLSDIQHHVYIGNYVNIHSNVFVGEKSIIKDFVWLFPHVVLTNDPT 162 (273)
T ss_dssp SCEECTTCEECSSCEECSSCE-----ECSSCEECTTCEECSSCEECSSCEECTTCEECTTCEECTTCEECTTCEECCCSS
T ss_pred CCEECCCCEECCceEECCCCE-----ECCCCEECccceeCCceEECCceEECCCCEECCCceeCCceeecCceEecCCCC
Confidence 443332 1122111111 100 0000233333333 233344444444444433222221
Q ss_pred ------CCeeecCCeEEccCEEEEcCCCEeCCCccC
Q 044626 400 ------EGDREANGYIISEGIVVIIHGAEIADGSII 429 (429)
Q Consensus 400 ------~~~~~~~~~~i~~~~~~i~~~~~i~~~~vv 429 (429)
.+.++|++++||.+ ++|.+++.|+++++|
T Consensus 163 ~~~~~~~~v~Ig~~~~IG~~-~~I~~g~~IG~~~~I 197 (273)
T 3fs8_A 163 PPSNELLGVTIELFAVIAAR-SVVLPGIHINEDALV 197 (273)
T ss_dssp SSCSCCCCCEECTTCEECTT-CEECTTCEECTTCEE
T ss_pred CcccccCCcEECCCeEEcCC-CEEcCCCEECCCCEE
Confidence 14667888888888 888888888888764
No 81
>3bfp_A Acetyltransferase; LEFT-handed beta helix, COA binding protein, N-glycan biosynthesis, bacillosamine, structural genomics, MKBSGI; HET: FLC; 1.75A {Campylobacter jejuni} SCOP: b.81.1.8 PDB: 2vhe_A* 3bsw_A* 3bss_A* 3bsy_A* 2npo_A
Probab=99.46 E-value=7.9e-13 Score=116.93 Aligned_cols=36 Identities=6% Similarity=0.007 Sum_probs=19.7
Q ss_pred eEEecCCHHHHHHHhHhhhcccCCCcceeCCCCcee
Q 044626 252 YWEDMRSIEAFYHANMECIKRSNMRYNFYDRDCPVY 287 (429)
Q Consensus 252 ~~~~i~t~~~~~~an~~~l~~~~~~~~~~~~~~~~~ 287 (429)
....++++....+....+++.......++++++.+.
T Consensus 50 ~~iaig~~~~r~~~~~~l~~~~~~~~~~i~~~a~i~ 85 (194)
T 3bfp_A 50 FFIAIGNNEIRKKIYQKISENGFKIVNLIHKSALIS 85 (194)
T ss_dssp EEECCCCHHHHHHHHHHHHTTTCCBCCEECTTCEEC
T ss_pred EEEEeCCHHHHHHHHHHHHHcCCccccccCCeEEEC
Confidence 456778888777776666553312223444444443
No 82
>3tk8_A 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N- succinyltransferase; ssgcid; 1.80A {Burkholderia pseudomallei}
Probab=99.46 E-value=2.9e-14 Score=134.68 Aligned_cols=22 Identities=23% Similarity=0.407 Sum_probs=12.7
Q ss_pred cccchhcccCCceEEEEEecceE
Q 044626 231 SEVIPAAISIGMKVEAYLFDGYW 253 (429)
Q Consensus 231 ~d~l~~l~~~g~~i~~~~~~~~~ 253 (429)
.+++..|-+.+.++..+ .++.|
T Consensus 74 ~~~~~~l~~~~~rva~~-~~~~~ 95 (316)
T 3tk8_A 74 AHAIEQLDRGALRVAEK-IDGAW 95 (316)
T ss_dssp HHHHHHHHTTSSCSEEE-ETTEE
T ss_pred HHHHHHHHhCCCEEeee-ccchH
Confidence 56666666655666665 33434
No 83
>3fs8_A QDTC; acetyltransferase, natural product, deoxysugar; HET: ACO; 1.70A {Thermoanaerobacteriumthermosaccharolyticum} PDB: 3fsb_A* 3fsc_A*
Probab=99.46 E-value=5.9e-13 Score=124.34 Aligned_cols=52 Identities=15% Similarity=0.199 Sum_probs=28.2
Q ss_pred eCCCCceecCCccCCCeEEeeeEeeCeEECCCcEEcceEeeCcEEcCCcEECCCCEEecC
Q 044626 280 YDRDCPVYTMPRCLPPTMIREAVIRDSVVGDGCIINRCKIKGTVIGMRTRIGDGAVIEDS 339 (429)
Q Consensus 280 ~~~~~~~~~~~~i~~~~~i~~~~i~~~~ig~~~~i~~~~v~~~~ig~~~~ig~~~~i~~~ 339 (429)
+++++.+++++.|++++.|. +++.|+++|+|++ +++||++|.|+++|.|++.
T Consensus 5 i~~~~~I~~~a~I~~~~~Ig----~~~~Ig~~~~I~~----~v~Ig~~~~I~~~~~I~~~ 56 (273)
T 3fs8_A 5 ISKSAIIKEGVIIGENVTIE----DNVYIDYGCIIRD----NVHIKKGSFIGARSILGEY 56 (273)
T ss_dssp ECTTCEECTTCEECSSEEEC----TTCEECTTCEECS----SEEECTTCEECTTCEEEEC
T ss_pred cCCCeEECCCcEECCCCEEC----CCcEECCCCEECC----CCEECCCcEECCCcEeCCc
Confidence 44444444444444444332 3555555555555 6666666666666666554
No 84
>2oeg_A UTP-glucose-1-phosphate uridylyltransferase 2, putative; rossmann-fold, beta-helix, pyrophosphorylase; HET: UPG; 2.30A {Leishmania major} PDB: 2oef_A*
Probab=99.46 E-value=6.9e-13 Score=132.11 Aligned_cols=204 Identities=14% Similarity=0.097 Sum_probs=131.2
Q ss_pred CeEEEEEcCCCCCCcccccccccccccccC-CcchhHHHHHHhhHhcCCC-----eEEEEee-cChhHHHHHHh-ccccC
Q 044626 1 SVAAVVFGDGSESRLYPLTKRRSEGAIPLA-ANYRLVDAVVSNCINSNIN-----KIYALTQ-FNSTSLNLHLS-RAFSG 72 (429)
Q Consensus 1 ~m~avIla~G~gsRl~plt~~~pK~Llpi~-g~~plI~~~i~~l~~~gi~-----~I~Iv~~-~~~~~i~~~l~-~~~~~ 72 (429)
++.+||||||.||||+ ...||+|+||+ |+ |+|++.++++.+.+.. .++|.++ +..+.+.+|++ +...
T Consensus 75 k~avViLAGGlGTRLg---~~~PK~llpV~~gk-~fLe~~ie~l~~~~~~~g~~ip~viMtS~~t~e~t~~~f~~~~~~- 149 (505)
T 2oeg_A 75 STVVLKLNGGLGTGMG---LCDAKTLLEVKDGK-TFLDFTALQVQYLRQHCSEHLRFMLMDSFNTSASTKSFLKARYPW- 149 (505)
T ss_dssp TEEEEEEECCCCGGGT---CCSCGGGSEEETTE-EHHHHHHHHHHHHHHHTCTTCEEEEEECHHHHHHHHHHHHHHCHH-
T ss_pred cceEEEEcCCcccccC---CCCCCcccccCCCC-cHHHHHHHHHHHHHHhcCCCcCEEEEeCCCCHHHHHHHHhhhhhc-
Confidence 5789999999999999 67899999999 99 9999999999887532 4555554 45788999998 5322
Q ss_pred cccCCCCcEEE----Eec----------c-ccccccCcccCcHHHHHHH-----HHHhhcCCCCeEEEEcCceeE-eccH
Q 044626 73 ILRGKDGFVEV----IAA----------Y-QSLEDQDWFQGNADAIRRC-----LWVLEEYPVTEFLILPGHHLY-KMDY 131 (429)
Q Consensus 73 ~~~~~~~~v~i----~~~----------~-~~~~~~~~~~Gt~~al~~~-----~~~i~~~~~~~~lvl~gD~i~-~~~l 131 (429)
++++.+....+ .+. . ........|.|+++.+... ++.+.....++++|.++|+++ ..++
T Consensus 150 fGl~~~~I~~f~Q~~~P~~~~~~~~~i~~~~~~~~e~~P~G~Gg~~~aL~~sGlL~~l~~~G~e~i~V~N~DNL~~~~D~ 229 (505)
T 2oeg_A 150 LYQVFDSEVELMQNQVPKILQDTLEPAAWAENPAYEWAPPGHGDIYTALYGSGKLQELVEQGYRYMFVSNGDNLGATIDK 229 (505)
T ss_dssp HHTTCCCCCEEECCCEECEETTTCCBCCCTTCGGGGEECCCTTHHHHHHHHTTHHHHHHHTTCCEEEEECTTCTTCCCCH
T ss_pred cCCCccceEEEEEcCEEeEecCCCceeecCCCCccccCcCCchHHHHHHHhcChHHHHHhcCCCEEEEEECCccccccCH
Confidence 44421000000 000 0 0000111267999998754 343332234899999999987 5567
Q ss_pred HHHHHHHHhcCCceEEEEEeccCCCC-CCccEEEEc------CCCC-------E--EEEEecCcccccccccCCCCCCCC
Q 044626 132 QRLIEAHRNNKADITIVALNAIRDKH-PGFGLLRVN------PVNQ-------V--IEFSMKSERETITSISGKSSRKSD 195 (429)
Q Consensus 132 ~~~~~~~~~~~~~~ti~~~~~~~~~~-~~~g~v~~d------~~~~-------v--~~~~ek~~~~~~~~~~~~~~~~~~ 195 (429)
.++.+|.++++++++.+.+.. .+ ..+|++..+ .+|+ + .++.+-|...... ..
T Consensus 230 -~llg~~~~~~ad~~~~v~~k~--~~d~~~Gvl~~~~~~~~~~dg~~nvEyn~~~llEyse~p~e~~~~---------~~ 297 (505)
T 2oeg_A 230 -RVLAYMEKEKIDFLMEVCRRT--ESDKKGGHLARQTVYVKGKDGQPDAEKRVLLLRESAQCPKADMES---------FQ 297 (505)
T ss_dssp -HHHHHHHHHTCSEEEEEEECC--TTCCSSEEEEEEEEEECCSSSCCCEEEEEEEEEEGGGSCGGGHHH---------HH
T ss_pred -HHHHHHHhcCCcEEEEEEEec--CCccceeEEEEecccccccCCccccccCceeEEEeccCChhhhhc---------cc
Confidence 889999999999998876643 33 457877662 4566 3 2222222211000 00
Q ss_pred CCCCCCcceeeEEEEcHHHHHHHHHh
Q 044626 196 SVASGNFPSMGIYLINRDTMSRLLKE 221 (429)
Q Consensus 196 ~~~~~~~~~~Giy~~~~~~l~~~l~~ 221 (429)
....-.+.++...+|+-+.++++++.
T Consensus 298 g~~~f~~~Ninn~~~~l~~l~~~~~~ 323 (505)
T 2oeg_A 298 DINKYSFFNTNNLWIRLPVLLETMQE 323 (505)
T ss_dssp CTTTTCEEEEEEEEEEHHHHHHHHHH
T ss_pred CccccCeeEEEEEEEEHHHHHHHHhh
Confidence 00122346899999999999888876
No 85
>4e79_A UDP-3-O-acylglucosamine N-acyltransferase; lipopolysaccaride synthesis; 2.66A {Acinetobacter baumannii} PDB: 4e75_A
Probab=99.45 E-value=6.4e-13 Score=128.53 Aligned_cols=175 Identities=16% Similarity=0.149 Sum_probs=86.0
Q ss_pred eEEecCCHHHHHHHhHhhhcccCCCcceeCCCCceecCCccCCCeEE-eeeEe-eCeEECCCcEEcc-eEee-CcEEcCC
Q 044626 252 YWEDMRSIEAFYHANMECIKRSNMRYNFYDRDCPVYTMPRCLPPTMI-REAVI-RDSVVGDGCIINR-CKIK-GTVIGMR 327 (429)
Q Consensus 252 ~~~~i~t~~~~~~an~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~~i-~~~~i-~~~~ig~~~~i~~-~~v~-~~~ig~~ 327 (429)
.+.-+.+|...+.....++.+.... +.++|.+.+.+++.+++++.| +++.| .++.||++|+|++ +.+. +++||++
T Consensus 78 ~~i~~~~p~~~~~~~~~~~~~~~~~-~~i~p~a~I~~~a~ig~~~~I~~~~~I~~~~~IG~~~~I~~~~~I~~~~~IG~~ 156 (357)
T 4e79_A 78 NFIIVDNPYLAFAILTHVFDKKISS-TGIESTARIHPSAVISETAYIGHYVVIGENCVVGDNTVIQSHTKLDDNVEVGKD 156 (357)
T ss_dssp EEEECSCHHHHHHHHHTTSSCCCCC-CEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECSS
T ss_pred cEEEECCHHHHHHHHHHHhcccccc-CeeCCCCEECCCCEECCCCEECCCCEECCCCEECCCCEECCCCEECCCCEECCC
Confidence 3556777876665555555443222 455555555555555444444 33333 2455555555554 4442 4444444
Q ss_pred cEECCCCEE------------ecCeEECCcccccccccccCCccccCCcceeEeCCCCee-cceEEe----cCcEECCCc
Q 044626 328 TRIGDGAVI------------EDSVIMGADFYQQGEDIQSSGKCINHKAIPVGIGEDTQI-KKAVID----KNARIGKNV 390 (429)
Q Consensus 328 ~~ig~~~~i------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~~~i-~~~~ig----~~~~ig~~~ 390 (429)
|.|+++++| +.+++++.+.++.......+.++++.+. +.||+++.| .+++|. +++.||+++
T Consensus 157 ~~I~~~~~I~~~~~IG~~~~I~~g~~Ig~dgfg~~~~~g~~~~i~~~g~--v~IGd~v~IG~~~~I~~g~~~~t~Ig~~~ 234 (357)
T 4e79_A 157 CFIDSYVTITGSSKLRDRVRIHSSTVIGGEGFGFAPYQGKWHRIAQLGS--VLIGNDVRIGSNCSIDRGALDNTILEDGV 234 (357)
T ss_dssp CEECTTCEECTTCEECSSCEECTTCEESCCCCCEEEETTEEEECCCCCC--EEECTTCEECTTCEECCCSSSCEEECTTC
T ss_pred CEECCCcEEecccEEEeEeeccCCeEECcccCcccccCCceeeccccCc--EEEcCCcEEccccEEeccccCCccccCCc
Confidence 444444444 3333333221121111112223322222 566666666 455554 455555555
Q ss_pred EEecCCCCCCCeeecCCeEEccCE-----EEEcCCCEeCCCccC
Q 044626 391 LIINKDGVQEGDREANGYIISEGI-----VVIIHGAEIADGSII 429 (429)
Q Consensus 391 ~i~~~~~~~~~~~~~~~~~i~~~~-----~~i~~~~~i~~~~vv 429 (429)
.|.++..++.+.++|+++.|++++ ++||+++.|+++++|
T Consensus 235 ~I~~~v~I~~~v~IG~~~~i~~~~~i~~~v~IG~~~~Ig~~s~V 278 (357)
T 4e79_A 235 IIDNLVQIAHNVHIGSNTAIAAKCGIAGSTKIGKNCILAGACGV 278 (357)
T ss_dssp EECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEE
T ss_pred ccCCCcccCCCeEECCCCEECCCCEECCCcEECCCCEECcCCEE
Confidence 555555555555555555555442 677777777777754
No 86
>3eh0_A UDP-3-O-[3-hydroxymyristoyl] glucosamine N- acyltransferase; LPXD, LEFT-handed parallel beta helix, acyl carrier protein, antibiotic resistance; 2.60A {Escherichia coli}
Probab=99.45 E-value=8.5e-13 Score=127.05 Aligned_cols=52 Identities=13% Similarity=0.245 Sum_probs=36.5
Q ss_pred eEeCCCCee-cceEEecCcEECCCcEEecCCCCCCCeeecCCeEEccCEEEEcC
Q 044626 367 VGIGEDTQI-KKAVIDKNARIGKNVLIINKDGVQEGDREANGYIISEGIVVIIH 419 (429)
Q Consensus 367 ~~ig~~~~i-~~~~ig~~~~ig~~~~i~~~~~~~~~~~~~~~~~i~~~~~~i~~ 419 (429)
+.||++|.| .++.+..+++||++|.|+.+..+.++.++|++++|+++ ..|-.
T Consensus 241 v~IG~~~~i~~~~~i~g~v~IG~~~~Ig~~s~V~~~v~Ig~~~vv~a~-s~V~~ 293 (341)
T 3eh0_A 241 VVIGDNTAVAGGVIMAGSLKIGRYCMIGGASVINGHMEICDKVTVTGM-GMVMR 293 (341)
T ss_dssp CEECTTCEECTTCEECTTEEECTTCEECTTCEECSSEEECSSEEECTT-CEECS
T ss_pred cEECCCCEECCCCEECCCcEECCCcEEcCCCEECCCCEECCCCEEeeC-CEECC
Confidence 456666666 45556667777777777777777788888888888887 34443
No 87
>3mqg_A Lipopolysaccharides biosynthesis acetyltransferas; beta helix, acetyl transferase, transferase; HET: ACO U5P UDP PE4; 1.43A {Bordetella petrii} PDB: 3mqh_A*
Probab=99.44 E-value=8.8e-13 Score=116.48 Aligned_cols=115 Identities=18% Similarity=0.328 Sum_probs=72.4
Q ss_pred CCccCCCeEEeeeEeeCeEECCCcEEcc-eEee-CcEEcCCcEECCCCEEecCeEECCcccccccccccCCccccCCcce
Q 044626 289 MPRCLPPTMIREAVIRDSVVGDGCIINR-CKIK-GTVIGMRTRIGDGAVIEDSVIMGADFYQQGEDIQSSGKCINHKAIP 366 (429)
Q Consensus 289 ~~~i~~~~~i~~~~i~~~~ig~~~~i~~-~~v~-~~~ig~~~~ig~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 366 (429)
++.|+|.+.+. +++.||++|.|++ +.+. +++||++|.|++++.|.+.+.+++.
T Consensus 3 ~~~I~p~a~I~----~~~~Ig~~~~I~~~~~I~~~~~IG~~~~Ig~~~~I~~~~~IG~~--------------------- 57 (192)
T 3mqg_A 3 MATIHPTAIVD----EGARIGAHSRIWHWVHICGGAEIGEGCSLGQNVFVGNRVRIGNR--------------------- 57 (192)
T ss_dssp CCEECTTCEEC----TTCEECTTCEECTTCEECTTCEECTTCEECTTCEECSSCEECSS---------------------
T ss_pred CCEECCCcEEC----CCCEECCCCEECCCCEECCCcEECCCCEECCCEEECCceEECCC---------------------
Confidence 34455555553 3445555555555 4442 6778888888888877776666653
Q ss_pred eEeCCCCee-cceEEecCcEECCCcEEecC---------------CCCCCCeeecCCeEEccCEEEEcCCCEeCCCccC
Q 044626 367 VGIGEDTQI-KKAVIDKNARIGKNVLIINK---------------DGVQEGDREANGYIISEGIVVIIHGAEIADGSII 429 (429)
Q Consensus 367 ~~ig~~~~i-~~~~ig~~~~ig~~~~i~~~---------------~~~~~~~~~~~~~~i~~~~~~i~~~~~i~~~~vv 429 (429)
+.|++++.| .++.||++|.||+++.+.+. ..++++..+|.++.|.++ ++||++++|++||+|
T Consensus 58 ~~I~~~~~I~~~~~Ig~~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~Ig~~v~IG~~~~I~~g-~~Ig~~~~IgagsvV 135 (192)
T 3mqg_A 58 VKIQNNVSVYDNVFLEDDVFCGPSMVFTNVYNPRAAIERKSEYRDTIVRQGATLGANCTVVCG-ATIGRYAFVGAGAVV 135 (192)
T ss_dssp CEECTTCEECTTEEECTTCEECTTCBCCSCSSCBTTBCCGGGCCCEEECTTCEECTTCEECTT-CEECTTCEECTTCEE
T ss_pred cEEcCCcEEeCCCEECCCCEECCceEEecccCCccccccccccCCcEECCCcEECCCCEECCC-CEECCCCEEcCCCEE
Confidence 677777777 67777777777777666531 122344445555556666 677777777777764
No 88
>2pig_A Putative transferase; SCR6, NESG, YDCK, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.38A {Salmonella paratyphi} PDB: 2f9c_A
Probab=99.43 E-value=1.2e-12 Score=124.61 Aligned_cols=147 Identities=14% Similarity=0.081 Sum_probs=100.7
Q ss_pred cceeCC-CCceecCCccCCCeEEeeeEeeCeEECCCcEEcc-eEeeCcEEcCCcEECCCCEEecCeEECCcc-ccccccc
Q 044626 277 YNFYDR-DCPVYTMPRCLPPTMIREAVIRDSVVGDGCIINR-CKIKGTVIGMRTRIGDGAVIEDSVIMGADF-YQQGEDI 353 (429)
Q Consensus 277 ~~~~~~-~~~~~~~~~i~~~~~i~~~~i~~~~ig~~~~i~~-~~v~~~~ig~~~~ig~~~~i~~~~~~~~~~-~~~~~~~ 353 (429)
..|+.+ ++.+++++.|++++.|. +++.||++|.|++ +.|.+|+|+++++|+++++|+++++.++.. ++++...
T Consensus 58 ~~~I~~~~a~I~~~a~I~~~~~I~----g~~~Ig~~~~Ig~~~~I~~~~Ig~~~~I~~~s~I~~s~I~~~~~I~~~~~i~ 133 (334)
T 2pig_A 58 DCWIYDENAMAFAGTEITGNARIT----QPCTLYNNVRIGDNVWIDRADISDGARISDNVTIQSSSVREECAIYGDARVL 133 (334)
T ss_dssp SCEECCTTCEEETTCEECTTCEEE----SSCEEESSCEECTTCEEESCEEESSCEECTTCEEESCEEESSEEECTTCEEE
T ss_pred ceEEcCCCeEEcCCcEECCCcEEe----eeeeECCCcEECCCCEEEeEEEcCCCEEeCCcEEeccEEcCCeEEecCCEEe
Confidence 346666 67777777777777665 5678888888888 888888888888888888888887666533 2223233
Q ss_pred ccCCc-----cccCCcceeEeCCCCeecceEEecCcEECCCcEEecCCCCCCCeeecCCeEEccCE---EEEcCCCEeCC
Q 044626 354 QSSGK-----CINHKAIPVGIGEDTQIKKAVIDKNARIGKNVLIINKDGVQEGDREANGYIISEGI---VVIIHGAEIAD 425 (429)
Q Consensus 354 ~~~~~-----~~~~~~~~~~ig~~~~i~~~~ig~~~~ig~~~~i~~~~~~~~~~~~~~~~~i~~~~---~~i~~~~~i~~ 425 (429)
.++.. ......+++.|++++.|.++.|+++|+|+.+|.|+ +..+..+.++++++.+.++. +.|++++.|+.
T Consensus 134 ~~s~I~~~~~~~~~~~~g~~I~~~a~I~~s~I~~g~~I~~~a~I~-~svI~~~a~I~~~a~V~~~~~~~v~I~~~~~I~g 212 (334)
T 2pig_A 134 NQSEILAIQGLTHEHAQILQIYDRATVNHSRIVHQVQLYGNATIT-HAFIEHRAEVFDFALIEGDKDNNVWICDCAKVYG 212 (334)
T ss_dssp SSCEEEC--------CCCEEECTTCEEESCEEETTCEECTTCEEE-SEEECTTCEECTTCEEECCSSCCEEECTTCEECT
T ss_pred CCEEEeecceeecccCCCeEECCCCEEeccEEcCCCEEcCCeEEe-CcEEcCCCEECCCcEECCceeccEEECCCcEEee
Confidence 22221 11122344789999999999999999999999997 56666777777777776552 34666666666
Q ss_pred Ccc
Q 044626 426 GSI 428 (429)
Q Consensus 426 ~~v 428 (429)
++.
T Consensus 213 ~a~ 215 (334)
T 2pig_A 213 HAR 215 (334)
T ss_dssp TCE
T ss_pred eEE
Confidence 543
No 89
>1hm9_A GLMU, UDP-N-acetylglucosamine-1-phosphate uridyltransfe; acetyltransferase, bifunctional, drug design; HET: ACO UD1; 1.75A {Streptococcus pneumoniae} SCOP: b.81.1.4 c.68.1.5 PDB: 1hm8_A* 1hm0_A* 4ac3_A* 4aaw_A* 1g97_A* 1g95_A*
Probab=99.43 E-value=4.4e-13 Score=135.00 Aligned_cols=137 Identities=20% Similarity=0.250 Sum_probs=65.9
Q ss_pred ceeCCCCceecCCccCCCeEE-eeeEeeC----------------eEECCCcEEcc-eEee-CcEEcCCcEECCCCEEec
Q 044626 278 NFYDRDCPVYTMPRCLPPTMI-REAVIRD----------------SVVGDGCIINR-CKIK-GTVIGMRTRIGDGAVIED 338 (429)
Q Consensus 278 ~~~~~~~~~~~~~~i~~~~~i-~~~~i~~----------------~~ig~~~~i~~-~~v~-~~~ig~~~~ig~~~~i~~ 338 (429)
+.+++.+.+..++.|++++.| .++.+++ +.||++|.|++ +.+. +++||++|.||+++.|.+
T Consensus 281 ~~i~~~~~i~~~~~ig~~~~I~~~~~i~~~~ig~~~~i~~~~i~~~~Ig~~~~Ig~~~~i~~~~~ig~~~~Ig~~~~i~~ 360 (468)
T 1hm9_A 281 VQIEANVILKGQTKIGAETVLTNGTYVVDSTIGAGAVITNSMIEESSVADGVTVGPYAHIRPNSSLGAQVHIGNFVEVKG 360 (468)
T ss_dssp CEECSSCEEESSCEECTTCEECTTCEEESCEECTTCEECSCEEESCEECTTCEECSSCEECSSCEECTTCEEEEEEEEES
T ss_pred CEECCCcEECCCCEECCCCEECCCCEEeccEEeCCcEEEEEEEeccccCCCcEECCceEEecCcEECCccEECCCcEEee
Confidence 344444545555555555555 3444433 44555555555 4444 455555555555555544
Q ss_pred CeEECCcccccccccccCCccccCCcceeEeCCCCeec--------ceEEecCcEECCCcEEecCCCCCCCeeecCCeEE
Q 044626 339 SVIMGADFYQQGEDIQSSGKCINHKAIPVGIGEDTQIK--------KAVIDKNARIGKNVLIINKDGVQEGDREANGYII 410 (429)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~~~i~--------~~~ig~~~~ig~~~~i~~~~~~~~~~~~~~~~~i 410 (429)
+.+..+..+.+....... ..+..+.||.++.+. .++||++|.||++|.|. .+.++|++++|
T Consensus 361 ~~Ig~~~~i~~~~~i~~~-----~Ig~~~~Ig~~~~i~~~~~~~~~~~~Ig~~~~Ig~~~~i~------~~v~Ig~~~~i 429 (468)
T 1hm9_A 361 SSIGENTKAGHLTYIGNC-----EVGSNVNFGAGTITVNYDGKNKYKTVIGDNVFVGSNSTII------APVELGDNSLV 429 (468)
T ss_dssp CEECTTCEEEEEEEEESE-----EECTTCEECTTCEEECBCSSCBCCEEECTTCEECTTCEEE------SSCEECTTCEE
T ss_pred eEEcCCcEeCCceEEccc-----cccCCcEECCCcEEecCcCccCCCcEECCCeEECCCCEEe------CCcEECCCCEE
Confidence 433332111111000000 011113444444442 35566666666666665 66777888888
Q ss_pred ccCEEEEcCCCEeCCCcc
Q 044626 411 SEGIVVIIHGAEIADGSI 428 (429)
Q Consensus 411 ~~~~~~i~~~~~i~~~~v 428 (429)
+++ ++|.+ .|+++++
T Consensus 430 ~~~-s~v~~--~v~~~~~ 444 (468)
T 1hm9_A 430 GAG-STITK--DVPADAI 444 (468)
T ss_dssp CTT-CEECS--CBCTTCE
T ss_pred CCC-CEECC--CCCCCCE
Confidence 888 45544 3455543
No 90
>3pmo_A UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltr; lipid A biosynthesis pathway, transferase; 1.30A {Pseudomonas aeruginosa}
Probab=99.43 E-value=1.3e-12 Score=127.04 Aligned_cols=175 Identities=19% Similarity=0.210 Sum_probs=75.7
Q ss_pred EEecCCHHHHHHHhHhhhcccCCCcceeCCCCceecCCccCCCeEE-eeeEe-eCeEECCCcEEcc-eEee-CcEEc---
Q 044626 253 WEDMRSIEAFYHANMECIKRSNMRYNFYDRDCPVYTMPRCLPPTMI-REAVI-RDSVVGDGCIINR-CKIK-GTVIG--- 325 (429)
Q Consensus 253 ~~~i~t~~~~~~an~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~~i-~~~~i-~~~~ig~~~~i~~-~~v~-~~~ig--- 325 (429)
++-+.+|+..+.....++.+.....+.+++.+.+.+++.+++++.| +++.| .++.||++|+|++ +.|. ++.||
T Consensus 95 ~l~~~~p~~~~~~~~~~~~~~~~~~~~i~p~a~i~~~a~Ig~~~~I~~~~~I~~~v~IG~~~~I~~~~~Ig~~v~IG~~~ 174 (372)
T 3pmo_A 95 ALVVANPYLAYASLSHLFDRKPKAAAGIHPTAIVAADAEVDPSASVGAYAVIESGARIGAGVSIGAHCVIGARSVIGEGG 174 (372)
T ss_dssp EEECSCHHHHHHHHHGGGCCCCCCCSEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTC
T ss_pred EEEECCHHHHHHHHHHHhccccccccccCCCCEECCCCEECCCCEECCCCEECCCCEECCCCEECCCCEECCCCEECCCc
Confidence 4446667766655555554432233445555555544444444444 33333 2444444444444 3332 33333
Q ss_pred ---------CCcEECCCCEEecCeEECCcccccccccccCCccccCCcceeEeCCCCee-cceEEe----cCcEECCCcE
Q 044626 326 ---------MRTRIGDGAVIEDSVIMGADFYQQGEDIQSSGKCINHKAIPVGIGEDTQI-KKAVID----KNARIGKNVL 391 (429)
Q Consensus 326 ---------~~~~ig~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~~~i-~~~~ig----~~~~ig~~~~ 391 (429)
++|+||++|.|..+++++.+.++.......+.++++.+. +.||+++.| .+++|. ++++||+++.
T Consensus 175 ~I~~~~~I~~~~~IG~~v~I~~g~~Ig~dgfg~~~~~g~~~~i~~~g~--v~IGd~v~IGa~~~I~~g~~~~t~IG~~~~ 252 (372)
T 3pmo_A 175 WLAPRVTLYHDVTIGARVSIQSGAVIGGEGFGFANEKGVWQKIAQIGG--VTIGDDVEIGANTTIDRGALSDTLIGNGVK 252 (372)
T ss_dssp EECTTCEECTTEEECTTCEECTTCEEEECCCCEEEETTEEEECCCCCC--EEECSSCEECTTCEEECCSSSCEEECTTCE
T ss_pred ccCCCcEEEeeeEECceeeccCCcEEecCcccccccCCcceeccccCC--eEECCCCEECCCcEEccCcccceEECCCCE
Confidence 334444444444333332221111111112223333222 445555554 333333 3344444444
Q ss_pred EecCCCCCCCeeecCCeEEccCE-----EEEcCCCEeCCCccC
Q 044626 392 IINKDGVQEGDREANGYIISEGI-----VVIIHGAEIADGSII 429 (429)
Q Consensus 392 i~~~~~~~~~~~~~~~~~i~~~~-----~~i~~~~~i~~~~vv 429 (429)
|.++..+..+.++|+++.|++++ ++||++++|+++++|
T Consensus 253 I~~~v~I~~~v~IG~~~~I~~~~~I~~~v~IG~~~~Ig~~a~V 295 (372)
T 3pmo_A 253 LDNQIMIAHNVQIGDHTAMAACVGISGSAKIGRHCMLAGGVGL 295 (372)
T ss_dssp ECTTCEECTTCEECTTCEECTTCEECTTCEECSSCEECTTCEE
T ss_pred ECCCCEECCCCEECCCCEECCCCEECCCCEECCCeEEeCCCEE
Confidence 44444444444444444444331 666666666666653
No 91
>3c8v_A Putative acetyltransferase; YP_390128.1, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; 2.28A {Desulfovibrio desulfuricans subsp}
Probab=99.42 E-value=5.6e-13 Score=132.93 Aligned_cols=116 Identities=14% Similarity=0.208 Sum_probs=89.5
Q ss_pred CceecCCccCCCeEEeeeEeeCeEECCCcEEcc-eEeeCcEEcCCcEECCCCEEecCeEECCcccccccccccCCccccC
Q 044626 284 CPVYTMPRCLPPTMIREAVIRDSVVGDGCIINR-CKIKGTVIGMRTRIGDGAVIEDSVIMGADFYQQGEDIQSSGKCINH 362 (429)
Q Consensus 284 ~~~~~~~~i~~~~~i~~~~i~~~~ig~~~~i~~-~~v~~~~ig~~~~ig~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 362 (429)
..+++++.+.|.+.+. +++.||++|.|++ +.|.+++||++|.|+++|+|.++++..+
T Consensus 274 ~~I~~~a~I~p~a~i~----g~v~IG~~~~I~~~a~I~~v~IG~~~~I~~~~~I~~~vIG~~------------------ 331 (496)
T 3c8v_A 274 AGSASGASVSGYAVIK----GDTVIGENVLVSQRAYLDNAWMGKGSNAQENCYIINSRLERN------------------ 331 (496)
T ss_dssp --CCTTCEECTTSEEE----SSCEECTTCEECTTCEEEEEEECTTCEECTTCEEEEEEEEES------------------
T ss_pred cccCCCcEECCCcEEe----CCeEECCCCEECCCcEEeceEecCCCEECCCceEeceEeCCC------------------
Confidence 3344455555655553 5788899999988 8888999999999999999998887776
Q ss_pred CcceeEeCCCCeecceEEecCcEECCCcEEecCCCCCCCeeecCCeEEccCEEEEc--CCCEeCCCcc
Q 044626 363 KAIPVGIGEDTQIKKAVIDKNARIGKNVLIINKDGVQEGDREANGYIISEGIVVII--HGAEIADGSI 428 (429)
Q Consensus 363 ~~~~~~ig~~~~i~~~~ig~~~~ig~~~~i~~~~~~~~~~~~~~~~~i~~~~~~i~--~~~~i~~~~v 428 (429)
+.||+++.+.+++||++|.||++|+|..+. ....++|++++||++ ++|. +++.|+++++
T Consensus 332 ----~~Ig~~a~I~gv~IGd~v~IG~~a~I~~~~--~~~v~IG~~a~IGag-svV~~~~~~~I~~~s~ 392 (496)
T 3c8v_A 332 ----CVTAHGGKIINAHLGDMIFTGFNSFLQGSE--SSPLKIGDGCVVMPH-TIIDLEEPLEIPAGHL 392 (496)
T ss_dssp ----CEECTTCEEESEEEEETCEECTTCEEECCS--SSCEEECTTCEECTT-CEEECSSCEEECSSEE
T ss_pred ----CEECCCcEEcCceECCCcEECCCCEEeCCC--CcceEECCCCEECCC-CEEecCCCcEeCCCCE
Confidence 899999999999999999999999998551 123666777777777 5665 6666666654
No 92
>2qia_A UDP-N-acetylglucosamine acyltransferase; LEFT-handed parallel beta helix; HET: U20; 1.74A {Escherichia coli K12} SCOP: b.81.1.1 PDB: 1lxa_A 2jf3_A* 2aq9_A* 2qiv_X* 2jf2_A
Probab=99.42 E-value=1.3e-12 Score=121.25 Aligned_cols=62 Identities=18% Similarity=0.051 Sum_probs=37.0
Q ss_pred eEeCCCCeec--------ceEEecCcEECCCcEEecCCCCCCCeeecCCeEEccCEEEEcCCCEeCCCccC
Q 044626 367 VGIGEDTQIK--------KAVIDKNARIGKNVLIINKDGVQEGDREANGYIISEGIVVIIHGAEIADGSII 429 (429)
Q Consensus 367 ~~ig~~~~i~--------~~~ig~~~~ig~~~~i~~~~~~~~~~~~~~~~~i~~~~~~i~~~~~i~~~~vv 429 (429)
+.|++++.|. .+.||++|.|++++.|.+...++++..++.++.+..+ +.|++++.|+++++|
T Consensus 90 ~~Ig~~~~I~~~~~~~~~~~~IG~~~~Ig~~~~I~~~~~Ig~~~~i~~~~~i~~~-v~Ig~~~~Ig~~~~I 159 (262)
T 2qia_A 90 NRIRESVTIHRGTVQGGGLTKVGSDNLLMINAHIAHDCTVGNRCILANNATLAGH-VSVDDFAIIGGMTAV 159 (262)
T ss_dssp CEECTTCEEECCCTTTTSEEEECSSCEECTTCEECTTCEECSSCEECTTCEECTT-CEECTTCEECTTCEE
T ss_pred ceeCCCCEEcCCccCCCCcCEECCCcEEeeeeEECCCCEECCCeEECCcccccCC-cEECCCcEEccCCEE
Confidence 4555555553 2666677777766666555555555555555555555 667777776666643
No 93
>3vbi_A ANTD, galactoside O-acetyltransferase; anthrose, acylated sugar, LEFT-handed beta helix, sugar N-AC transferase; HET: COA 0FX; 1.80A {Bacillus cereus} PDB: 3vbj_A* 3vbm_A* 3vbk_A* 3vbp_A* 3vbl_A* 3vbn_A*
Probab=99.41 E-value=5.5e-13 Score=119.10 Aligned_cols=50 Identities=16% Similarity=0.151 Sum_probs=27.5
Q ss_pred eecCCccCCCeEEeeeEeeCeEECCCcEEcc-eEee-CcEEcCCcEECCCCEEe
Q 044626 286 VYTMPRCLPPTMIREAVIRDSVVGDGCIINR-CKIK-GTVIGMRTRIGDGAVIE 337 (429)
Q Consensus 286 ~~~~~~i~~~~~i~~~~i~~~~ig~~~~i~~-~~v~-~~~ig~~~~ig~~~~i~ 337 (429)
+++++.|++++.+.+. .++.||++|.|++ +.+. +++||++|.|++++.|.
T Consensus 35 ig~~~~I~~~~~i~~~--~~v~IG~~~~I~~~~~I~~~v~IG~~~~I~~~~~I~ 86 (205)
T 3vbi_A 35 VGKNVLISKKASIYNP--GVISIGNNVRIDDFCILSGKVTIGSYSHIAAYTALY 86 (205)
T ss_dssp ECSSEEEBTTSEEESG--GGEEECSSEEECTTCEEEEEEEECSSEEECTTCEEE
T ss_pred ECCCCEECCCeEEccC--CeeEECCCCEECCCCEEccceEECCCCEECCCeEEE
Confidence 3444444455544210 1445555555555 5553 67777777777777774
No 94
>4fce_A Bifunctional protein GLMU; GLMU. csgid, niaid, structural genomics, national institute allergy and infectious diseases; HET: GP1; 1.96A {Yersinia pseudotuberculosis} PDB: 3fww_A 1hv9_A* 2oi5_A* 2oi6_A* 2oi7_A* 1fxj_A* 1fwy_A*
Probab=99.41 E-value=3.9e-13 Score=135.03 Aligned_cols=109 Identities=16% Similarity=0.317 Sum_probs=60.4
Q ss_pred eeEeeCeEECCCcEEcc-eEee-CcEEcCCcEECCCCEEecCeEECCcccccccccccCCccccCCcceeEeCCCCee-c
Q 044626 300 EAVIRDSVVGDGCIINR-CKIK-GTVIGMRTRIGDGAVIEDSVIMGADFYQQGEDIQSSGKCINHKAIPVGIGEDTQI-K 376 (429)
Q Consensus 300 ~~~i~~~~ig~~~~i~~-~~v~-~~~ig~~~~ig~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~~~i-~ 376 (429)
++.+.++.||++|.|++ +.+. +++||++|.||+++.|.++.+..+..++...... .+.||++|.| .
T Consensus 315 ~~~i~~~~Ig~~~~ig~~~~i~~~~~ig~~~~Ig~~~~i~~~~i~~~~~i~~~~~i~-----------~~~Ig~~~~ig~ 383 (459)
T 4fce_A 315 YTVLEDARLDANCTVGPFARLRPGAELAEGAHVGNFVEIKKARLGKGSKAGHLSYLG-----------DAEIGAGVNIGA 383 (459)
T ss_dssp SCEEESCEECTTCEECSSEEECTTCEECTTCEEEEEEEEEEEEECTTCEEEEEEEEE-----------EEEECTTCEECT
T ss_pred CcEEeCCEECCCCEECCccEECCCcEECCCcEECCCeEEeeeEEcCCCEECCceEEC-----------CeEECCCCEECC
Confidence 34445566777777777 6664 6667777777776666654444432211111111 1345555554 2
Q ss_pred c-------------eEEecCcEECCCcEEecCCCCCCCeeecCCeEEccCEEEEcCCCEeCCCcc
Q 044626 377 K-------------AVIDKNARIGKNVLIINKDGVQEGDREANGYIISEGIVVIIHGAEIADGSI 428 (429)
Q Consensus 377 ~-------------~~ig~~~~ig~~~~i~~~~~~~~~~~~~~~~~i~~~~~~i~~~~~i~~~~v 428 (429)
+ +.||++|.||.+++|. .+.++|++++|++| ++|-+. |+++++
T Consensus 384 ~~~i~~~~~~~~~~v~Ig~~~~IG~~~~I~------~gv~Ig~~~~igag-svV~~~--v~~~~~ 439 (459)
T 4fce_A 384 GTITCNYDGANKFKTIIGDDVFVGSDTQLV------APVTVANGATIGAG-TTVTRD--VAENEL 439 (459)
T ss_dssp TCEEECBCSSCBCCEEECTTCEECTTCEEE------SSEEECTTCEECTT-CEECSC--BCTTCE
T ss_pred CCEEeccccccCCCCEECCCeEEcCCCEEc------CCcEECCCCEECCC-CEEccc--cCCCCE
Confidence 2 4555555555555554 67788888888888 455443 455543
No 95
>3gos_A 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N- succinyltransferase; 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransfera acyltransferase; 1.80A {Yersinia pestis} SCOP: b.81.1.2 PDB: 1kgq_A* 1kgt_A* 2tdt_A* 3tdt_A* 3bxy_A 1tdt_A
Probab=99.39 E-value=6.1e-13 Score=123.92 Aligned_cols=34 Identities=18% Similarity=0.398 Sum_probs=16.0
Q ss_pred CeEECCCcEEcceEeeCcEEcCCcEECCCCEEecCeEE
Q 044626 305 DSVVGDGCIINRCKIKGTVIGMRTRIGDGAVIEDSVIM 342 (429)
Q Consensus 305 ~~~ig~~~~i~~~~v~~~~ig~~~~ig~~~~i~~~~~~ 342 (429)
++.||++|.|+. +++|+++|.||++|.|..++.+
T Consensus 133 ~~~IG~~~~I~~----~~~Ig~~~~IG~~v~I~~~~~i 166 (276)
T 3gos_A 133 GAFVDEGTMVDT----WATVGSCAQIGKNVHLSGGVGI 166 (276)
T ss_dssp TCEECTTCEECT----TEEECTTCEECTTCEECTTCEE
T ss_pred CeEECCCCEECC----CCEECCCCEECCCCEECCCCEE
Confidence 444444444444 4444444444444444444444
No 96
>3vbi_A ANTD, galactoside O-acetyltransferase; anthrose, acylated sugar, LEFT-handed beta helix, sugar N-AC transferase; HET: COA 0FX; 1.80A {Bacillus cereus} PDB: 3vbj_A* 3vbm_A* 3vbk_A* 3vbp_A* 3vbl_A* 3vbn_A*
Probab=99.38 E-value=2e-12 Score=115.39 Aligned_cols=12 Identities=17% Similarity=0.188 Sum_probs=6.0
Q ss_pred CeEECCCcEEcc
Q 044626 305 DSVVGDGCIINR 316 (429)
Q Consensus 305 ~~~ig~~~~i~~ 316 (429)
++.||++|.|++
T Consensus 70 ~v~IG~~~~I~~ 81 (205)
T 3vbi_A 70 KVTIGSYSHIAA 81 (205)
T ss_dssp EEEECSSEEECT
T ss_pred ceEECCCCEECC
Confidence 444555555555
No 97
>4ea9_A Perosamine N-acetyltransferase; beta helix, acetyl coenzyme A, GDP-perosa transferase; HET: JBT; 0.90A {Caulobacter vibrioides} PDB: 4ea8_A* 4ea7_A* 4eaa_A* 4eab_A*
Probab=99.37 E-value=5.5e-12 Score=113.81 Aligned_cols=38 Identities=5% Similarity=-0.138 Sum_probs=19.0
Q ss_pred EEecCCHHHHHHHhHhhhcccCCCcceeCCCCceecCC
Q 044626 253 WEDMRSIEAFYHANMECIKRSNMRYNFYDRDCPVYTMP 290 (429)
Q Consensus 253 ~~~i~t~~~~~~an~~~l~~~~~~~~~~~~~~~~~~~~ 290 (429)
+..++++....+....+.+.......++++.+.+..++
T Consensus 75 ~iAIg~~~~R~~i~~~l~~~g~~~~~~i~~~a~i~~~v 112 (220)
T 4ea9_A 75 FVAIGDNRLRQKLGRKARDHGFSLVNAIHPSAVVSPSV 112 (220)
T ss_dssp EECCCCHHHHHHHHHHHHHTTCEECCEECTTCEECTTC
T ss_pred EEecCCHHHHHHHHHHHHhcCCCcCCcCCCCCEECCCC
Confidence 44566766666666665553322233445444444333
No 98
>2ggo_A 401AA long hypothetical glucose-1-phosphate thymidylyltransferase; beta barrel; 1.80A {Sulfolobus tokodaii} PDB: 2ggq_A*
Probab=99.36 E-value=3e-12 Score=126.24 Aligned_cols=118 Identities=22% Similarity=0.212 Sum_probs=81.2
Q ss_pred eCCCCceecCCccCCCeEE-eeeEe-eCeEECCCcEEcc-eEeeCcEEcCCcEECCCCEEecCeEECCcccccccccccC
Q 044626 280 YDRDCPVYTMPRCLPPTMI-REAVI-RDSVVGDGCIINR-CKIKGTVIGMRTRIGDGAVIEDSVIMGADFYQQGEDIQSS 356 (429)
Q Consensus 280 ~~~~~~~~~~~~i~~~~~i-~~~~i-~~~~ig~~~~i~~-~~v~~~~ig~~~~ig~~~~i~~~~~~~~~~~~~~~~~~~~ 356 (429)
+++.+.+..++.|++++.| .++.| .++.||++|.|++ +.+.+++|++++.|++++.|+++++.++
T Consensus 253 I~~~~~i~~~~~Ig~~~~I~~~~~i~~~~~Ig~~~~ig~~~~i~~~~i~~~~~i~~~~~i~~~~Ig~~------------ 320 (401)
T 2ggo_A 253 IKSGTYIEGPVYIGKGSEIGPNSYLRPYTILVEKNKIGASVEVKESVIMEGSKIPHLSYVGDSVIAED------------ 320 (401)
T ss_dssp ECTTCEEESSEEECTTCEECSSCEECTTEEECSSCEEEETCEEESEEECTTCEEEESCEEESCEECTT------------
T ss_pred ECCCCEEeCCeEECCCCEECCCCEEcCCcEECCCCEECCCCEEecCEEcCCcEECCCceEcceEECCC------------
Confidence 3344444444445555555 45555 4789999999999 8888999999999999998887666555
Q ss_pred CccccCCcceeEeCCCCeec-------------------------ceEEecCcEECCCcEEecCCCCCCCeeecCCeEEc
Q 044626 357 GKCINHKAIPVGIGEDTQIK-------------------------KAVIDKNARIGKNVLIINKDGVQEGDREANGYIIS 411 (429)
Q Consensus 357 ~~~~~~~~~~~~ig~~~~i~-------------------------~~~ig~~~~ig~~~~i~~~~~~~~~~~~~~~~~i~ 411 (429)
+.||.++.|. +++||++|.||++++|. .+.++|++++|+
T Consensus 321 ----------~~Ig~~~~i~~~~~~~~~~~~~i~~~~~~~~~~~~~v~Ig~~~~Ig~~~~I~------~gv~Ig~~~vi~ 384 (401)
T 2ggo_A 321 ----------VNFGAGTLIANLRFDEKEVKVNVKGKRISSGRRKLGAFIGGHVRTGINVTIL------PGVKIGAYARIY 384 (401)
T ss_dssp ----------CEECTTCEECCSCTTCSCCEEEETTEEEECSCSSCCCEECTTCEECTTCEEC------TTCEECTTCEEC
T ss_pred ----------cEECCCcEEcCcccCCCceeEEECCceEEecccccCcEECCCeEECCCcEEc------CCcEECCCcEEC
Confidence 5666666664 45566666666666555 677788888888
Q ss_pred cCEEEEcCCCEeCCCcc
Q 044626 412 EGIVVIIHGAEIADGSI 428 (429)
Q Consensus 412 ~~~~~i~~~~~i~~~~v 428 (429)
++ ++|.+. ++++++
T Consensus 385 ~g-svv~~~--vp~~~~ 398 (401)
T 2ggo_A 385 PG-AVVNRD--VGYGEF 398 (401)
T ss_dssp TT-CEECSC--BCTTCE
T ss_pred CC-CeEccc--cCCCcE
Confidence 88 566543 567665
No 99
>3ixc_A Hexapeptide transferase family protein; niaid, ssgcid, seattle structural genomics center for infect disease, GRAM-negative bacteria; 1.61A {Anaplasma phagocytophilum}
Probab=99.35 E-value=4.6e-12 Score=111.72 Aligned_cols=101 Identities=23% Similarity=0.365 Sum_probs=62.5
Q ss_pred eEECCCcEEcc-eEee-CcEEcCCcEECCCCEEecC---eEECCcccccccccccCCccccCCcceeEeCCCCeec----
Q 044626 306 SVVGDGCIINR-CKIK-GTVIGMRTRIGDGAVIEDS---VIMGADFYQQGEDIQSSGKCINHKAIPVGIGEDTQIK---- 376 (429)
Q Consensus 306 ~~ig~~~~i~~-~~v~-~~~ig~~~~ig~~~~i~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~~~i~---- 376 (429)
+.||++|.|++ +.+. ++.||++|.|+++|.|.++ +++++. +.|+++|.|.
T Consensus 34 ~~ig~~~~I~~~~~i~~~v~IG~~~~I~~~~~I~~~~~~i~IG~~---------------------~~I~~~~~I~~~~~ 92 (191)
T 3ixc_A 34 PSVDSTAFIAGNARIIGDVCIGKNASIWYGTVLRGDVDKIEVGEG---------------------TNIQDNTVVHTDSM 92 (191)
T ss_dssp CEECTTSEECTTCEEEEEEEECTTCEECTTCEEEEEEEEEEECTT---------------------CEECTTCEECC---
T ss_pred CEECCCCEECCCCEEeCCcEECCCCEECCCCEEecCCCCeEECCC---------------------CEECCCCEEeecCC
Confidence 34444444444 4442 6777777777777777643 244442 6777777775
Q ss_pred --ceEEecCcEECCCcEEecCCCCCCCeeecCCeEEccCEEEEcCCCEeCCCccC
Q 044626 377 --KAVIDKNARIGKNVLIINKDGVQEGDREANGYIISEGIVVIIHGAEIADGSII 429 (429)
Q Consensus 377 --~~~ig~~~~ig~~~~i~~~~~~~~~~~~~~~~~i~~~~~~i~~~~~i~~~~vv 429 (429)
+++||++|.||+++.+. +..++++..+|.++.|.++ +.|+++++|++|++|
T Consensus 93 ~g~~~Ig~~~~Ig~~~~i~-~~~Ig~~~~Ig~~~~I~~~-~~Ig~~~~Ig~gsvV 145 (191)
T 3ixc_A 93 HGDTVIGKFVTIGHSCILH-ACTLGNNAFVGMGSIVMDR-AVMEEGSMLAAGSLL 145 (191)
T ss_dssp -CCEEECTTCEECTTCEEC-SCEECTTCEECTTCEECTT-CEECTTCEECTTCEE
T ss_pred cCCeEECCCCEECCCCEEE-CCEECCCCEECCCCEEeCC-eEECCCCEECCCCEE
Confidence 67777777777777664 3455555666666666666 666666676666653
No 100
>3kwd_A Carbon dioxide concentrating mechanism protein; LEFT-handed beta helix, gamma carbonic anhydrase, disulfide dependent activity; 1.10A {Thermosynechococcus elongatus} PDB: 3kwe_A 3kwc_A
Probab=99.35 E-value=5.6e-12 Score=113.21 Aligned_cols=111 Identities=19% Similarity=0.157 Sum_probs=86.3
Q ss_pred CCcceeCCCCceecCCccCCCeEE-eeeEe-----eCeEECCCcEEcc-eEeeC---------------cEEcCCcEECC
Q 044626 275 MRYNFYDRDCPVYTMPRCLPPTMI-REAVI-----RDSVVGDGCIINR-CKIKG---------------TVIGMRTRIGD 332 (429)
Q Consensus 275 ~~~~~~~~~~~~~~~~~i~~~~~i-~~~~i-----~~~~ig~~~~i~~-~~v~~---------------~~ig~~~~ig~ 332 (429)
.+.+++++.+.+..++.|++++.| .++.+ .++.||++|.|++ +.+.. ++||++|.|++
T Consensus 43 ~~~~~I~~~a~i~~~v~IG~~~~I~~~~~I~~~~~~~v~IG~~~~Ig~~~~I~~~~~~~~ig~~~~~~~~~IG~~v~Ig~ 122 (213)
T 3kwd_A 43 APTAYVHSFSNLIGDVRIKDYVHIAPGTSIRADEGTPFHIGSRTNIQDGVVIHGLQQGRVIGDDGQEYSVWIGDNVSITH 122 (213)
T ss_dssp CTTCEECTTSEEEESEEECTTCEECTTCEEEESSSCCEEECTTCEECTTCEEEECSSCCEECTTSCEESEEECTTCEECT
T ss_pred CCCCEECCCCEEeCceEECCCCEEcCCcEEecCCCCceEECCCCEECCCCEEEecCCCceeccCCcccceEECCCcEECC
Confidence 345667777777777777777777 56666 2589999999999 88863 89999999999
Q ss_pred CCEEecCeEECCcccccccccccCCccccCCcceeEeCCCCeecceEEecCcEECCCcEEecCCCCCCCeeecCCeEEcc
Q 044626 333 GAVIEDSVIMGADFYQQGEDIQSSGKCINHKAIPVGIGEDTQIKKAVIDKNARIGKNVLIINKDGVQEGDREANGYIISE 412 (429)
Q Consensus 333 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~~~i~~~~ig~~~~ig~~~~i~~~~~~~~~~~~~~~~~i~~ 412 (429)
++.|.+.++++++ +.||.++.|.+++||++|.||+++++. +.++++++.|.+
T Consensus 123 ~~~I~~~v~Ig~~---------------------v~IG~~a~I~~~~Ig~~~~Igags~V~-------~~~i~~~~~v~~ 174 (213)
T 3kwd_A 123 MALIHGPAYIGDG---------------------CFIGFRSTVFNARVGAGCVVMMHVLIQ-------DVEIPPGKYVPS 174 (213)
T ss_dssp TCEEEEEEEECTT---------------------CEECTTCEEEEEEECTTCEECSSCEEE-------SCEECTTBEECT
T ss_pred CcEEcCCCEECCC---------------------CEECCCCEEeCcEECCCCEEcCCCEEC-------CcEeCCCCEECC
Confidence 9999987777763 899999999889999999999999994 234444444444
Q ss_pred C
Q 044626 413 G 413 (429)
Q Consensus 413 ~ 413 (429)
+
T Consensus 175 ~ 175 (213)
T 3kwd_A 175 G 175 (213)
T ss_dssp T
T ss_pred C
Confidence 4
No 101
>2pig_A Putative transferase; SCR6, NESG, YDCK, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.38A {Salmonella paratyphi} PDB: 2f9c_A
Probab=99.34 E-value=7.8e-12 Score=118.97 Aligned_cols=148 Identities=14% Similarity=0.114 Sum_probs=100.5
Q ss_pred CcceeCCCCceecCCccCCCeEE-eeeEeeCeEECCCcEEcc-eEeeCcEEcCCcEECCCCEEecCeEE-CC--------
Q 044626 276 RYNFYDRDCPVYTMPRCLPPTMI-REAVIRDSVVGDGCIINR-CKIKGTVIGMRTRIGDGAVIEDSVIM-GA-------- 344 (429)
Q Consensus 276 ~~~~~~~~~~~~~~~~i~~~~~i-~~~~i~~~~ig~~~~i~~-~~v~~~~ig~~~~ig~~~~i~~~~~~-~~-------- 344 (429)
+.+.+.+++.++.++.|+++++| +++.|.++.|++++.|++ +.+.+++|+++|.|+.++++.+.+.+ .+
T Consensus 70 ~~a~I~~~~~I~g~~~Ig~~~~Ig~~~~I~~~~Ig~~~~I~~~s~I~~s~I~~~~~I~~~~~i~~~s~I~~~~~~~~~~~ 149 (334)
T 2pig_A 70 AGTEITGNARITQPCTLYNNVRIGDNVWIDRADISDGARISDNVTIQSSSVREECAIYGDARVLNQSEILAIQGLTHEHA 149 (334)
T ss_dssp TTCEECTTCEEESSCEEESSCEECTTCEEESCEEESSCEECTTCEEESCEEESSEEECTTCEEESSCEEEC--------C
T ss_pred CCcEECCCcEEeeeeeECCCcEECCCCEEEeEEEcCCCEEeCCcEEeccEEcCCeEEecCCEEeCCEEEeecceeecccC
Confidence 34556677777777777777777 678888999999999998 99999999999998888877665443 22
Q ss_pred --cccccccccccCCccccCCcceeEeCCCCeecceEEecCcEECCCcEEecCCC----CCCCeee--------------
Q 044626 345 --DFYQQGEDIQSSGKCINHKAIPVGIGEDTQIKKAVIDKNARIGKNVLIINKDG----VQEGDRE-------------- 404 (429)
Q Consensus 345 --~~~~~~~~~~~~~~~~~~~~~~~~ig~~~~i~~~~ig~~~~ig~~~~i~~~~~----~~~~~~~-------------- 404 (429)
.+++.+..+..+. +.+. |.|+.++.|.+++|++++.|++++.+.++.. +.....+
T Consensus 150 ~g~~I~~~a~I~~s~--I~~g---~~I~~~a~I~~svI~~~a~I~~~a~V~~~~~~~v~I~~~~~I~g~a~V~R~~~~~E 224 (334)
T 2pig_A 150 QILQIYDRATVNHSR--IVHQ---VQLYGNATITHAFIEHRAEVFDFALIEGDKDNNVWICDCAKVYGHARVIAGTEEDA 224 (334)
T ss_dssp CCEEECTTCEEESCE--EETT---CEECTTCEEESEEECTTCEECTTCEEECCSSCCEEECTTCEECTTCEEECCSSTTC
T ss_pred CCeEECCCCEEeccE--EcCC---CEEcCCeEEeCcEEcCCCEECCCcEECCceeccEEECCCcEEeeeEEEeccCCHHH
Confidence 1233333333222 2222 7888888888899999999999999865530 1222222
Q ss_pred ----cCCeEEccCEEEEcCCCEeCCCccC
Q 044626 405 ----ANGYIISEGIVVIIHGAEIADGSII 429 (429)
Q Consensus 405 ----~~~~~i~~~~~~i~~~~~i~~~~vv 429 (429)
...+.|+++ +.|+++++|+.+++|
T Consensus 225 i~~i~~~a~I~~~-a~I~~nv~Ig~nv~I 252 (334)
T 2pig_A 225 IPTLRYSSQVAEH-ALIEGNCVLKHHVLV 252 (334)
T ss_dssp CCEECTTCEECTT-CEEESSEEECTTEEE
T ss_pred hhhhhhcceecCC-EEECCCCEEcCCCEE
Confidence 124555566 677777777777653
No 102
>3eg4_A 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N- succinyltransferase; ssgcid, beta helix, acyltransferase, amino-acid biosynthesis, cytoplasm; 1.87A {Brucella suis}
Probab=99.34 E-value=2.2e-12 Score=121.47 Aligned_cols=60 Identities=18% Similarity=0.331 Sum_probs=33.1
Q ss_pred eCCCCceecCCccCCCeEEeeeEe-eCeEECCCcEEcceEeeCcEEcCCcEECCCCEEecCeEEC
Q 044626 280 YDRDCPVYTMPRCLPPTMIREAVI-RDSVVGDGCIINRCKIKGTVIGMRTRIGDGAVIEDSVIMG 343 (429)
Q Consensus 280 ~~~~~~~~~~~~i~~~~~i~~~~i-~~~~ig~~~~i~~~~v~~~~ig~~~~ig~~~~i~~~~~~~ 343 (429)
+++.+.+..++.|++++.|....+ .++.||++|.|+. +++||++|.||++|.|..++.++
T Consensus 132 I~p~a~I~~~v~Ig~g~~I~~~~I~~~~~IG~~~~I~~----~~~Ig~~~~IG~~v~I~~~~~i~ 192 (304)
T 3eg4_A 132 AVPNCIVRHSAYIAPNAILMPSFVNLGAYVDKGAMIDT----WATVGSCAQIGKNVHLSGGVGIG 192 (304)
T ss_dssp ECTTCEEBTTCEECTTCEECSEEECTTCEECTTCEECT----TEEECTTCEECTTCEECTTCEEC
T ss_pred EcCCEEECCCcEECCCCEEeCCEECCCCEECCCcEEcC----CcEECCCCccCCCcEECCCCEEC
Confidence 344555555555555555521122 4666777777766 45666666666666665555444
No 103
>2v0h_A Bifunctional protein GLMU; cell WALL, magnesium, cell shape, transferase, peptidoglycan synthesis, associative mechanism; 1.79A {Haemophilus influenzae} PDB: 2v0i_A* 2v0j_A* 2v0k_A* 2v0l_A* 2vd4_A* 2w0v_A* 2w0w_A* 3twd_A*
Probab=99.34 E-value=3.1e-12 Score=128.31 Aligned_cols=150 Identities=17% Similarity=0.223 Sum_probs=91.2
Q ss_pred CcceeCCCCceecCCccCCCeEE-eeeEeeCeEECCCcEEcc-eEeeCcEEcCCcEECCCCEEecCeEECC-cccccccc
Q 044626 276 RYNFYDRDCPVYTMPRCLPPTMI-REAVIRDSVVGDGCIINR-CKIKGTVIGMRTRIGDGAVIEDSVIMGA-DFYQQGED 352 (429)
Q Consensus 276 ~~~~~~~~~~~~~~~~i~~~~~i-~~~~i~~~~ig~~~~i~~-~~v~~~~ig~~~~ig~~~~i~~~~~~~~-~~~~~~~~ 352 (429)
+...+++.+.+..++.|++++.| .++.|.++.||++|.|++ +.+.+++||++|.||+++.|..++.+++ ..++++..
T Consensus 270 ~~~~I~~~~~i~~~~~Ig~~~~I~~~~~i~~~~ig~~~~I~~~~~i~~~~ig~~~~I~~~~~i~~~~~ig~~~~ig~~~~ 349 (456)
T 2v0h_A 270 KDVEIDVNVIIEGNVKLGDRVKIGTGCVLKNVVIGNDVEIKPYSVLEDSIVGEKAAIGPFSRLRPGAELAAETHVGNFVE 349 (456)
T ss_dssp SSCEECSSEEEEEEEEECTTCEECTTCEEEEEEECTTCEECSSCEEEEEEECTTCEECSSEEECTTCEECTTCEEEEEEE
T ss_pred CCCEEcCCcEEcCCcEECCCCEECCCCEEEeEEEeCCCEEcCCeEEccCcCCCCcEECCccEECCCCEECCCCEECCCCE
Confidence 34455666666666667777777 577778889999999998 8888888898888888888876555553 33444433
Q ss_pred cccCC-----ccccCC-cceeEeCCCCee-cceEEec-------CcEECCCcEEecCCCCCCCeeecCCeEEccCEEEEc
Q 044626 353 IQSSG-----KCINHK-AIPVGIGEDTQI-KKAVIDK-------NARIGKNVLIINKDGVQEGDREANGYIISEGIVVII 418 (429)
Q Consensus 353 ~~~~~-----~~~~~~-~~~~~ig~~~~i-~~~~ig~-------~~~ig~~~~i~~~~~~~~~~~~~~~~~i~~~~~~i~ 418 (429)
+.++. ++.... -..+.||++|.| .++++.. +++||++|.|+.+..+..+.++|++++|+++ ++|.
T Consensus 350 i~~~~i~~~~~i~~~~~~~~~~Ig~~v~Ig~~~~i~~~~~~~~~~v~Ig~~~~Ig~~~~i~~~v~Ig~~~~ig~~-s~v~ 428 (456)
T 2v0h_A 350 IKKSTVGKGSKVNHLTYVGDSEIGSNCNIGAGVITCNYDGANKFKTIIGDDVFVGSDTQLVAPVKVANGATIGAG-TTIT 428 (456)
T ss_dssp EESCEECTTCEEEEEEEEESEEECTTCEECTTCEEEECSSSSCCCEEECSSCEECTTCEEEESEEECTTCEECTT-CEEC
T ss_pred EeccEECCCCEeccceeecCcEECCCcEECCceEEeccccccCCCcEECCCCEECCCCEEcCCcEECCCCEECCC-CEEC
Confidence 33221 000000 011456666665 3443332 4444444444444444477788888888888 5554
Q ss_pred CCCEeCCCcc
Q 044626 419 HGAEIADGSI 428 (429)
Q Consensus 419 ~~~~i~~~~v 428 (429)
+. ++++++
T Consensus 429 ~~--v~~~~~ 436 (456)
T 2v0h_A 429 RD--VGENEL 436 (456)
T ss_dssp SC--BCTTCE
T ss_pred CC--cCCCCE
Confidence 43 455543
No 104
>3tv0_A Dynactin subunit 6; LEFT-handed beta-helix, ARP11, cytosol, structural; 2.15A {Homo sapiens}
Probab=99.33 E-value=1.1e-11 Score=109.44 Aligned_cols=50 Identities=10% Similarity=0.112 Sum_probs=32.4
Q ss_pred eEEecCcEECCCcEEecCCCCCCCeeecCCeEEccCEEEEcCCCEeCCCccC
Q 044626 378 AVIDKNARIGKNVLIINKDGVQEGDREANGYIISEGIVVIIHGAEIADGSII 429 (429)
Q Consensus 378 ~~ig~~~~ig~~~~i~~~~~~~~~~~~~~~~~i~~~~~~i~~~~~i~~~~vv 429 (429)
+.||+++.|+.++.+. ...++.+..++.++.|+.+ +.||++|+|++||+|
T Consensus 86 ~~Ig~~~~i~~~~~i~-~~~Ig~~~~Ig~~~~I~~g-v~IG~~~~IgagsvV 135 (194)
T 3tv0_A 86 MIIGTNNVFEVGCYSQ-AMKMGDNNVIESKAYVGRN-VILTSGCIIGACCNL 135 (194)
T ss_dssp EEECSSCEECTTCEEC-CSEECSSCEECTTCEECTT-EEECSSCEECTTCEE
T ss_pred eEECCcceEecceeEe-eeeecccceecceeeECCe-EEECCCCEECCCCEE
Confidence 4566666666666663 3345556666677777777 677777777777764
No 105
>3t57_A UDP-N-acetylglucosamine O-acyltransferase domain- protein; LEFT-handed parallel beta helix, lipid A biosynthesis, lipid synthesis; 2.10A {Arabidopsis thaliana}
Probab=99.33 E-value=1.2e-11 Score=117.29 Aligned_cols=151 Identities=19% Similarity=0.215 Sum_probs=79.3
Q ss_pred ceeCCCCceecCCccCCCeEE-eeeEe-eCeEECCCcEEcc-eEee-CcEEcCCcEECCCCEEec----CeEECC-cccc
Q 044626 278 NFYDRDCPVYTMPRCLPPTMI-REAVI-RDSVVGDGCIINR-CKIK-GTVIGMRTRIGDGAVIED----SVIMGA-DFYQ 348 (429)
Q Consensus 278 ~~~~~~~~~~~~~~i~~~~~i-~~~~i-~~~~ig~~~~i~~-~~v~-~~~ig~~~~ig~~~~i~~----~~~~~~-~~~~ 348 (429)
++++|++.+.+++.|++++.| +++.| .++.||++|+|++ +.+. +++||++|.|+++++|.. .++++. ..++
T Consensus 8 ~~I~p~A~I~~~a~Ig~~v~Ig~~~~I~~~v~IG~~~~I~~~~~I~g~~~IG~~~~I~~~a~I~~d~~g~~~IG~~~~Ig 87 (305)
T 3t57_A 8 VLIHPSAVVHPNAVIGKGVSVGPYCTIGSSVKLGNGCKLYPSSHVFGNTELGESCVLMTGAVVGDELPGYTFIGCNNIIG 87 (305)
T ss_dssp -CBCTTSEECTTSEECTTCEECTTCEECTTEEECTTCEECTTCEECSSEEECTTCEECTTCEECCSSSEEEEECSSCEEC
T ss_pred CeECCCCEECCCCEECCCCEECCCCEECCCCEECCCCEECCCcEECCCcEECCCcEEccCcEeccCCCCceEECCceEEC
Confidence 445555555555555555555 44554 4888888888888 7775 788888888888887753 233332 2222
Q ss_pred cccccccC---------CccccCCcceeEeCCCCeec-------ceEEecCcEECCCcEEecCCCCCCCeeecCCeEEcc
Q 044626 349 QGEDIQSS---------GKCINHKAIPVGIGEDTQIK-------KAVIDKNARIGKNVLIINKDGVQEGDREANGYIISE 412 (429)
Q Consensus 349 ~~~~~~~~---------~~~~~~~~~~~~ig~~~~i~-------~~~ig~~~~ig~~~~i~~~~~~~~~~~~~~~~~i~~ 412 (429)
.+...... .......+..+.|++++.|. .+.||++|.|++++.|.+...++.+..++.++.++.
T Consensus 88 ~~a~Ig~~~q~~~~~~~~~~~i~IG~~~~I~~~~~I~~g~~~~~~~~IG~~~~I~~~~~I~~~~~IG~~~~i~~~~~i~g 167 (305)
T 3t57_A 88 HHAVVGVKCQDLKYKHGDECFLCIGNNNEIREFCSIHRSSKPSDKTVIGDNNLIMGSCHIAHDCKIGDRNIFANNTLLAG 167 (305)
T ss_dssp TTCEEEECCCCTTCCTTCCEEEEECSSCEECTTCEEECCSSTTCCEEECSSCEECTTCEECTTCEECSSCEECTTCEECT
T ss_pred CccEeCccccccceecCCCceEEECCCcccCceEEEeecccccCccEEccCccccceEEEeCceEeCCceEECCCcccCC
Confidence 22111100 00001111113344444441 234555555555555554444444444444455555
Q ss_pred CEEEEcCCCEeCCCccC
Q 044626 413 GIVVIIHGAEIADGSII 429 (429)
Q Consensus 413 ~~~~i~~~~~i~~~~vv 429 (429)
+ +.||++++|+++++|
T Consensus 168 ~-v~Igd~~~Ig~~~~V 183 (305)
T 3t57_A 168 H-VVVEDNTHTAGASVV 183 (305)
T ss_dssp T-CEECSSCEECTTCEE
T ss_pred C-CEECCceEEcCCCEE
Confidence 5 677777777766653
No 106
>3oc9_A UDP-N-acetylglucosamine pyrophosphorylase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.80A {Entamoeba histolytica}
Probab=99.33 E-value=3.4e-11 Score=116.29 Aligned_cols=201 Identities=12% Similarity=0.025 Sum_probs=133.8
Q ss_pred CeEEEEEcCCCCCCccccccccccccccc---CCcchhHHHHHHhhHh-------------cCCCeEEEEeecChhHHHH
Q 044626 1 SVAAVVFGDGSESRLYPLTKRRSEGAIPL---AANYRLVDAVVSNCIN-------------SNINKIYALTQFNSTSLNL 64 (429)
Q Consensus 1 ~m~avIla~G~gsRl~plt~~~pK~Llpi---~g~~plI~~~i~~l~~-------------~gi~~I~Iv~~~~~~~i~~ 64 (429)
|+.+|+||||.||||+ ...||+|+|| .|+ |++++.++.+.+ .++.-++....+..+.+.+
T Consensus 35 kvavvlLAGG~GTRLG---~~~PK~~~~Vgl~~gk-s~lq~~~e~i~~lq~l~~~~~~~~~~~Ip~~IMtS~~t~e~t~~ 110 (405)
T 3oc9_A 35 KTALITPAGGQGSRLG---FEHPKGMFVLPFEIPK-SIFQMTSERLLRLQELASEYSHQKNVMIHWFLMTNEETIEEINN 110 (405)
T ss_dssp CEEEEEECCSBCTTTT---CCSBGGGCEECSSSCE-EHHHHHHHHHHHHHHHHHHHHCCSCCCCEEEEEECTTTHHHHHH
T ss_pred ceEEEEecCCCccccc---CCCCCccccccCCCCC-cHHHHHHHHHHHHHHHHhhhccccCCCCCEEEEeCCccHHHHHH
Confidence 4678999999999996 5789999999 899 999999998853 4677555555666888999
Q ss_pred HHhccccCcccCCCCcEEEEecccc----------------ccccCcccCcHHHHHHHH-----HHhhcCCCCeEEEEcC
Q 044626 65 HLSRAFSGILRGKDGFVEVIAAYQS----------------LEDQDWFQGNADAIRRCL-----WVLEEYPVTEFLILPG 123 (429)
Q Consensus 65 ~l~~~~~~~~~~~~~~v~i~~~~~~----------------~~~~~~~~Gt~~al~~~~-----~~i~~~~~~~~lvl~g 123 (429)
++.+... ++++... +.+..|. ..-...|.|+++.+.... +.+.....+.+++.+.
T Consensus 111 ~f~~~~~-fGl~~~~---i~~f~Q~~~P~i~~dg~i~l~~~~~i~~~P~GhGgi~~aL~~sG~Ld~l~~~Gieyi~v~nv 186 (405)
T 3oc9_A 111 YFKEHQY-FGLSSEQ---IHCFPQGMLPVVDFNGKILYEKKDKPYMAPNGHGGLFKALKDNGILEFMNEKGIKYSVAHNV 186 (405)
T ss_dssp HHHHTGG-GGSCTTS---EEEEECCEEECBCTTSCBCEEETTEECEEECCGGGHHHHHHHTTHHHHHHHHTCCEEEEECT
T ss_pred HHHhCcc-cCCCccc---eEEEeeCceeEEecCCCeecCCCCccccccCCChHHHHHHHHCCcHHHHHhcCCEEEEEEeC
Confidence 9987433 4554211 1211110 000112679988777533 2233223479999999
Q ss_pred ce-eEeccHHHHHHHHHhcCCceEEEEEeccCCCC-CCccEEEE-cCCCCEEEEEecCcccccccccCCCCCCCCCCCCC
Q 044626 124 HH-LYKMDYQRLIEAHRNNKADITIVALNAIRDKH-PGFGLLRV-NPVNQVIEFSMKSERETITSISGKSSRKSDSVASG 200 (429)
Q Consensus 124 D~-i~~~~l~~~~~~~~~~~~~~ti~~~~~~~~~~-~~~g~v~~-d~~~~v~~~~ek~~~~~~~~~~~~~~~~~~~~~~~ 200 (429)
|+ +.......++.+|.++++++++-+.+.. .+ ...|++.. |..-+|.++.+.+.. ... .+. .-...-
T Consensus 187 DN~L~~~~Dp~~lg~~~~~~~d~~~kvv~k~--~~dek~Gvl~~~dg~~~vvEysei~~e-~e~---~~~----~g~l~f 256 (405)
T 3oc9_A 187 DNILCKDVDPNMIGYMDLLQSEICIKIVKKG--FKEEKVGVLVKEQERIKVVEYTELTDE-LNK---QLS----NGEFIY 256 (405)
T ss_dssp TBTTCCSSCHHHHHHHHHTTCSEEEEEEECC--STTCSCCEEEEETTEEEEECGGGCCTT-TTC---BCT----TSCBSS
T ss_pred CCcccccCCHHHHHHHHHcCCCEEEEEEECC--CCCCccceEEEECCeeEEEEEeeCCHH-Hhh---cCC----CCceee
Confidence 99 7777777899999999999888665533 34 56787764 433467777765553 111 000 000123
Q ss_pred CcceeeEEEEcHHHHHHHH
Q 044626 201 NFPSMGIYLINRDTMSRLL 219 (429)
Q Consensus 201 ~~~~~Giy~~~~~~l~~~l 219 (429)
+..+.++++|+.++|+++.
T Consensus 257 n~~Ni~~h~fs~~fL~~i~ 275 (405)
T 3oc9_A 257 NCGHISINGYSTSFLEKAA 275 (405)
T ss_dssp CEEEEEEEEEEHHHHHHHT
T ss_pred ccceeEeeecCHHHHHHhh
Confidence 4568889999999998776
No 107
>2yqc_A UDP-N-acetylglucosamine pyrophosphorylase; uridine-diphospho-N- acetylglucosamine, N-acetylglucosamine-1-phosphate, transferase; 1.90A {Candida albicans} PDB: 2yqh_A* 2yqj_A* 2yqs_A*
Probab=99.32 E-value=1.1e-11 Score=123.81 Aligned_cols=206 Identities=14% Similarity=0.093 Sum_probs=134.0
Q ss_pred CeEEEEEcCCCCCCcccccccccccccccC---CcchhHHHHHHhhHhc--------C------CCeEEEEeecChhHHH
Q 044626 1 SVAAVVFGDGSESRLYPLTKRRSEGAIPLA---ANYRLVDAVVSNCINS--------N------INKIYALTQFNSTSLN 63 (429)
Q Consensus 1 ~m~avIla~G~gsRl~plt~~~pK~Llpi~---g~~plI~~~i~~l~~~--------g------i~~I~Iv~~~~~~~i~ 63 (429)
||.+|+||||.||||+ ...||+|+||+ |+ |+|++.++.+.+. | +..++...++..+.+.
T Consensus 103 kvavvlLaGG~GTRLg---~~~PK~l~~v~l~~gk-~~l~~~~e~l~~~~~~~~~~~G~~~~~~ip~~ImtS~~t~~~t~ 178 (486)
T 2yqc_A 103 EVAVLLMAGGQGTRLG---SSAPKGCFNIELPSQK-SLFQIQAEKILKIEQLAQQYLKSTKKPIINWYIMTSGPTRNATE 178 (486)
T ss_dssp CEEEEEEEESBCGGGT---CSSBGGGCBCCCTTCC-BHHHHHHHHHHHHHHHHHHHHTCSSCCCCEEEEEECGGGHHHHH
T ss_pred CeEEEEEcCCccccCC---CCCCCccceecCCCCC-cHHHHHHHHHHHHHHHhhhhcCCCcCCccCEEEEECCCCHHHHH
Confidence 5889999999999995 67899999999 99 9999999999876 6 7777777777788899
Q ss_pred HHHhccccCcccCCCCcEEEEecccc------ccc-----------cCcccCcHHHHHHHH-----HHhhcCCCCeEEEE
Q 044626 64 LHLSRAFSGILRGKDGFVEVIAAYQS------LED-----------QDWFQGNADAIRRCL-----WVLEEYPVTEFLIL 121 (429)
Q Consensus 64 ~~l~~~~~~~~~~~~~~v~i~~~~~~------~~~-----------~~~~~Gt~~al~~~~-----~~i~~~~~~~~lvl 121 (429)
+++.+... ++++.. . +....|. .+. ...|.|+++.+.... +.+.....+.+.+.
T Consensus 179 ~~~~~~~~-fgl~~~-~--v~~f~Q~~~P~i~~dg~~i~l~~~~~i~~~P~G~Ggi~~aL~~sG~Ld~l~~~G~~yi~v~ 254 (486)
T 2yqc_A 179 SFFIENNY-FGLNSH-Q--VIFFNQGTLPCFNLQGNKILLELKNSICQSPDGNGGLYKALKDNGILDDLNSKGIKHIHMY 254 (486)
T ss_dssp HHHHHTGG-GGSCGG-G--EEEEECCEEECBCTTSSSBCEEETTEECEEECCGGGHHHHHHHTTHHHHHHHHTCCEEEEE
T ss_pred HHHhhccc-cCCCcc-e--EEEEecccceeEcCCCCccccCCCCccccCcCCchHHHHHHHHcCcHHHHHhcCCeEEEEE
Confidence 99987432 454321 1 1111111 000 012679988876543 23322234788899
Q ss_pred cCceeE--eccHHHHHHHHHhcCCceEEEEEeccCCCCCCccEEEEcC-CC--CEEEEEecCcccccccccCCCCCCCCC
Q 044626 122 PGHHLY--KMDYQRLIEAHRNNKADITIVALNAIRDKHPGFGLLRVNP-VN--QVIEFSMKSERETITSISGKSSRKSDS 196 (429)
Q Consensus 122 ~gD~i~--~~~l~~~~~~~~~~~~~~ti~~~~~~~~~~~~~g~v~~d~-~~--~v~~~~ek~~~~~~~~~~~~~~~~~~~ 196 (429)
+.|.+. ..| -.++.+|..+++++++.+.+... .....|++.... +| +|.+|.+++...... .+...+.
T Consensus 255 ~vDN~l~~~~D-p~~lg~~~~~~~~~~~~vv~k~~-~~e~~Gvl~~~~~dg~~~vvEy~E~~~~~~~~---~~~~~~~-- 327 (486)
T 2yqc_A 255 CVDNCLVKVAD-PIFIGFAIAKKFDLATKVVRKRD-ANESVGLIVLDQDNQKPCVIEYSEISQELANK---KDPQDSS-- 327 (486)
T ss_dssp ETTBTTCCTTC-HHHHHHHHHHTCSEEEEEEECCS-TTCCCCEEEEETTTTEEEEECGGGSCHHHHHC---EETTEEE--
T ss_pred CCCCceeeccC-HHHHHHHHHcCCCEEEEEEEcCC-CCCceeEEEEEecCCCEEEEEEecCCHHHhhc---ccccccc--
Confidence 999844 334 35788898999998886654321 125668776431 44 477777776532100 0000000
Q ss_pred CCCCCcceeeEEEEcHHHHHHHHHh
Q 044626 197 VASGNFPSMGIYLINRDTMSRLLKE 221 (429)
Q Consensus 197 ~~~~~~~~~Giy~~~~~~l~~~l~~ 221 (429)
.......++|+|+|+.++|++.+.+
T Consensus 328 ~~~~~~~Ni~~~~~~l~~L~~~l~~ 352 (486)
T 2yqc_A 328 KLFLRAANIVNHYYSVEFLNKMIPK 352 (486)
T ss_dssp EESSCEEEEEEEEEEHHHHHHHHHH
T ss_pred cccccceeEEEEEEeHHHHHHHHHh
Confidence 0123577999999999999875654
No 108
>3r3r_A Ferripyochelin binding protein; structural genomics, csgid, center for structural genomics O infectious diseases, all beta protein; 1.20A {Salmonella enterica subsp} SCOP: b.81.1.0 PDB: 3tio_A 3tis_A
Probab=99.31 E-value=1.1e-11 Score=108.99 Aligned_cols=101 Identities=19% Similarity=0.312 Sum_probs=78.3
Q ss_pred eEECCCcEEcc-eEee-CcEEcCCcEECCCCEEecCe---EECCcccccccccccCCccccCCcceeEeCCCCee-----
Q 044626 306 SVVGDGCIINR-CKIK-GTVIGMRTRIGDGAVIEDSV---IMGADFYQQGEDIQSSGKCINHKAIPVGIGEDTQI----- 375 (429)
Q Consensus 306 ~~ig~~~~i~~-~~v~-~~~ig~~~~ig~~~~i~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~~~i----- 375 (429)
..||+++.|++ +.+. ++.||++|.|++++.|..+. .++++ +.|++++.|
T Consensus 16 ~~ig~~~~I~~~~~i~~~v~IG~~~~I~~~~~i~~~~~~i~IG~~---------------------~~I~~~~~I~~~~~ 74 (187)
T 3r3r_A 16 PGIGQRVMIDTSSVVIGDVRLADDVGIWPLVVIRGDVNYVAIGAR---------------------TNIQDGSVLHVTHK 74 (187)
T ss_dssp CEECTTCEECTTCEEEEEEEECTTCEECTTCEEEEEEEEEEECTT---------------------CEECTTCEEECBCC
T ss_pred cccCCCeEECCCCEEECceEECCCCEECCCcEEEcCCccEEECCC---------------------CEECCCCEEecCCc
Confidence 45666666666 5552 79999999999999998643 66653 788999888
Q ss_pred -------cceEEecCcEECCCcEEecCCCCCCCeeecCCeEEccCEEEEcCCCEeCCCccC
Q 044626 376 -------KKAVIDKNARIGKNVLIINKDGVQEGDREANGYIISEGIVVIIHGAEIADGSII 429 (429)
Q Consensus 376 -------~~~~ig~~~~ig~~~~i~~~~~~~~~~~~~~~~~i~~~~~~i~~~~~i~~~~vv 429 (429)
.+++||++|.||+++.|. +..++++..+|.+++|..+ +.||++++|+++++|
T Consensus 75 ~~~~~~~~~~~Ig~~~~Ig~~~~i~-~~~Ig~~~~Ig~~~~I~~~-~~Ig~~~~Ig~~s~V 133 (187)
T 3r3r_A 75 SSSNPHGNPLIIGEDVTVGHKVMLH-GCTIGNRVLVGMGSIVLDG-AIIEDDVMIGAGSLV 133 (187)
T ss_dssp BTTBC-CBCEEECSSCEECTTCEEE-SCEECSSEEECTTCEECTT-CEECSSEEECTTCEE
T ss_pred cccCCCCCCeEECCCCEECCCCEEe-CcEECCCCEECCCCEECCC-CEECCCCEECCCCEE
Confidence 778999999999999885 3666777777777777777 788888888888864
No 109
>2iu8_A LPXD, UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; UDP-3- O-acyl-glucosamine N-acyltransferase, lipid A biosynthesis; HET: PLM UD1; 2.2A {Chlamydia trachomatis} PDB: 2iu9_A* 2iua_A*
Probab=99.31 E-value=2.9e-11 Score=117.91 Aligned_cols=96 Identities=24% Similarity=0.282 Sum_probs=67.2
Q ss_pred cceeCCCCceecCCccCCCeEE-eeeEee-CeEECCCcEEcc-eEe-eCcEEcCCcEECCCCEEecCeEECCcccccccc
Q 044626 277 YNFYDRDCPVYTMPRCLPPTMI-REAVIR-DSVVGDGCIINR-CKI-KGTVIGMRTRIGDGAVIEDSVIMGADFYQQGED 352 (429)
Q Consensus 277 ~~~~~~~~~~~~~~~i~~~~~i-~~~~i~-~~~ig~~~~i~~-~~v-~~~~ig~~~~ig~~~~i~~~~~~~~~~~~~~~~ 352 (429)
...+++.+.+.+++.|++++.| +++.|. ++.||++|+|++ +.+ .+++||++|.|+++++|...+.+++.
T Consensus 124 ~~~i~~~~~i~~~a~Ig~~~~I~~~~~I~~~~~IG~~~~I~~~~~Ig~~~~IG~~~~I~~~~~I~~~~~IG~~------- 196 (374)
T 2iu8_A 124 FPGIHPTAVIHPTAIIEDHVCIEPYAVVCQHAHVGSACHIGSGSVIGAYSTVGEHSYIHPRVVIRERVSIGKR------- 196 (374)
T ss_dssp CCSBCTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECSSEEECTT-------
T ss_pred cCccCCCCEECCCcEECCCCEECCCCEECCCCEECCCCEECCCcEECCCcEECCceeeCCCcEEcccceECCC-------
Confidence 4567888888888888888888 667774 788888888887 555 45666666666666666555555542
Q ss_pred cccCCccccCCcceeEeCCCCeec---------------------ceEEecCcEECCCcEEe
Q 044626 353 IQSSGKCINHKAIPVGIGEDTQIK---------------------KAVIDKNARIGKNVLII 393 (429)
Q Consensus 353 ~~~~~~~~~~~~~~~~ig~~~~i~---------------------~~~ig~~~~ig~~~~i~ 393 (429)
+.|++++.|. .++||++|.||++++|.
T Consensus 197 --------------~~I~~~~~Ig~~~~~~~~~~~~~~~~i~~~g~v~Ig~~v~IG~~~~I~ 244 (374)
T 2iu8_A 197 --------------VIIQPGAVIGSCGFGYVTSAFGQHKHLKHLGKVIIEDDVEIGANTTID 244 (374)
T ss_dssp --------------CEECTTCEEEEECSCEEEETTTEEEECCCCCCEEECTTCEECTTCEEE
T ss_pred --------------CEECCCCEECcCCcccccccCCceeEeeeeccEEECCCCEECCCcEEc
Confidence 5666666652 36677777777777764
No 110
>3eg4_A 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N- succinyltransferase; ssgcid, beta helix, acyltransferase, amino-acid biosynthesis, cytoplasm; 1.87A {Brucella suis}
Probab=99.31 E-value=4.7e-12 Score=119.21 Aligned_cols=16 Identities=25% Similarity=0.520 Sum_probs=6.6
Q ss_pred eEEecCcEECCCcEEe
Q 044626 378 AVIDKNARIGKNVLII 393 (429)
Q Consensus 378 ~~ig~~~~ig~~~~i~ 393 (429)
++||++|.||++|+|.
T Consensus 203 v~IGd~v~IG~~a~I~ 218 (304)
T 3eg4_A 203 TIIEDNCFIGARSEVV 218 (304)
T ss_dssp CEECTTCEECTTCEEC
T ss_pred eEEcCCCEECCCCEEc
Confidence 3344444444444443
No 111
>1v3w_A Ferripyochelin binding protein; beta-helix, carbonic anhydrase, structural genomics, riken S genomics/proteomics initiative, RSGI, lyase; 1.50A {Pyrococcus horikoshii} SCOP: b.81.1.5 PDB: 1v67_A 2fko_A
Probab=99.30 E-value=2.3e-11 Score=105.47 Aligned_cols=95 Identities=25% Similarity=0.267 Sum_probs=72.6
Q ss_pred cceeCCCCceecCCccCCCeEE-eeeEee----CeEECCCcEEcc-eEee-----CcEEcCCcEECCCCEEecCeEECCc
Q 044626 277 YNFYDRDCPVYTMPRCLPPTMI-REAVIR----DSVVGDGCIINR-CKIK-----GTVIGMRTRIGDGAVIEDSVIMGAD 345 (429)
Q Consensus 277 ~~~~~~~~~~~~~~~i~~~~~i-~~~~i~----~~~ig~~~~i~~-~~v~-----~~~ig~~~~ig~~~~i~~~~~~~~~ 345 (429)
.+++++.+.+..++.|++++.+ +++.+. ++.||++|.|++ +.+. +++||++|.|++++.|.++.+.++
T Consensus 16 ~~~I~~~a~i~g~v~IG~~~~I~~~~~i~~~~~~~~IG~~~~I~~~~~I~~~~~~~~~Ig~~~~I~~~~~i~~~~Ig~~- 94 (173)
T 1v3w_A 16 SAFVDENAVVIGDVVLEEKTSVWPSAVLRGDIEQIYVGKYSNVQDNVSIHTSHGYPTEIGEYVTIGHNAMVHGAKVGNY- 94 (173)
T ss_dssp TCEECTTSEEEEEEEECTTCEECTTCEEEEEEEEEEECTTCEECTTCEEECBTTBCEEECSSCEECTTCEEESCEECSS-
T ss_pred CCEECCCCEEeCCEEECCCCEECCCeEEecCCceEEECCCCEECCCcEEEecCCCCeEECCCCEECCCCEECCCEECCC-
Confidence 3455666665555556666666 455553 389999999999 8886 589999999999999987666554
Q ss_pred ccccccccccCCccccCCcceeEeCCCCee-cceEEecCcEECCCcEEe
Q 044626 346 FYQQGEDIQSSGKCINHKAIPVGIGEDTQI-KKAVIDKNARIGKNVLII 393 (429)
Q Consensus 346 ~~~~~~~~~~~~~~~~~~~~~~~ig~~~~i-~~~~ig~~~~ig~~~~i~ 393 (429)
+.||.++.| .++.||++|.||+++++.
T Consensus 95 ---------------------~~Ig~~~~i~~~~~Ig~~~~Ig~~s~V~ 122 (173)
T 1v3w_A 95 ---------------------VIIGISSVILDGAKIGDHVIIGAGAVVP 122 (173)
T ss_dssp ---------------------EEECTTCEECTTCEECSSEEECTTCEEC
T ss_pred ---------------------CEECCCCEEeCCCEECCCCEECCCCEEC
Confidence 888988887 678888888888888886
No 112
>3r1w_A Carbonic anhydrase; beta-helix, lyase; 1.73A {Unidentified}
Probab=99.29 E-value=1.7e-11 Score=107.87 Aligned_cols=101 Identities=16% Similarity=0.295 Sum_probs=77.8
Q ss_pred eEECCCcEEcc-eEee-CcEEcCCcEECCCCEEecC---eEECCcccccccccccCCccccCCcceeEeCCCCeecce--
Q 044626 306 SVVGDGCIINR-CKIK-GTVIGMRTRIGDGAVIEDS---VIMGADFYQQGEDIQSSGKCINHKAIPVGIGEDTQIKKA-- 378 (429)
Q Consensus 306 ~~ig~~~~i~~-~~v~-~~~ig~~~~ig~~~~i~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~~~i~~~-- 378 (429)
..||+++.|++ +.+. ++.||++|.|++++.|..+ +.++++ |.|++++.|..+
T Consensus 20 ~~ig~~~~I~~~~~i~~~v~IG~~~~I~~~~~i~~~~~~i~IG~~---------------------~~I~~~~~I~~~~~ 78 (189)
T 3r1w_A 20 PKLGERVFVDRSSVIIGDVELGDDCSVWPLAVIRGDMHHIRIGAR---------------------TSVQDGSVLHITHA 78 (189)
T ss_dssp CEECTTCEECTTCEEEEEEEECTTCEECTTCEEEEEEEEEEECTT---------------------CEECTTCEEECBCC
T ss_pred CEECCCcEECCCCEEeeeeEECCCCEECCCCEEecCCCceEECCC---------------------CEECCCCEEecCCc
Confidence 35566666666 5552 8999999999999999743 466653 789999988554
Q ss_pred ----------EEecCcEECCCcEEecCCCCCCCeeecCCeEEccCEEEEcCCCEeCCCccC
Q 044626 379 ----------VIDKNARIGKNVLIINKDGVQEGDREANGYIISEGIVVIIHGAEIADGSII 429 (429)
Q Consensus 379 ----------~ig~~~~ig~~~~i~~~~~~~~~~~~~~~~~i~~~~~~i~~~~~i~~~~vv 429 (429)
+||++|.||++|.|.+ ..++++..+|.+++|..+ +.||++++|++|++|
T Consensus 79 ~~~~~~~~~~~Ig~~~~Ig~~~~i~~-~~Ig~~~~Ig~~~~i~~~-v~Ig~~~~Ig~~s~V 137 (189)
T 3r1w_A 79 SDYNPGGYPLIIGDDVTIGHQAMLHG-CTIGNRVLIGMKSMIMDG-AIVEDEVIVAAGATV 137 (189)
T ss_dssp SSSSTTCBCEEECSSEEECTTCEEES-CEECSSEEECTTCEECTT-CEECSSCEECTTCEE
T ss_pred ccCCCCCCCeEECCCCEECCCCEEeC-cEECCCcEECCCCEEcCC-CEECCCCEEccCCEE
Confidence 8999999999999864 667777777778888777 788888888888875
No 113
>1xhd_A Putative acetyltransferase/acyltransferase; structural genomics, protein structure initiative, medwest C structural genomics, MCSG; 1.90A {Bacillus cereus} SCOP: b.81.1.5 PDB: 3vnp_A 2eg0_A
Probab=99.29 E-value=2.9e-11 Score=104.80 Aligned_cols=95 Identities=20% Similarity=0.278 Sum_probs=68.7
Q ss_pred cceeCCCCceecCCccCCCeEE-eeeEeeC----eEECCCcEEcc-eEee-----CcEEcCCcEECCCCEEecCeEECCc
Q 044626 277 YNFYDRDCPVYTMPRCLPPTMI-REAVIRD----SVVGDGCIINR-CKIK-----GTVIGMRTRIGDGAVIEDSVIMGAD 345 (429)
Q Consensus 277 ~~~~~~~~~~~~~~~i~~~~~i-~~~~i~~----~~ig~~~~i~~-~~v~-----~~~ig~~~~ig~~~~i~~~~~~~~~ 345 (429)
.+++++.+.+..++.|++++.+ .++.+.. +.||++|.|++ +.+. +++||++|.|++++.|.++.+.++
T Consensus 18 ~~~I~~~~~i~~~v~IG~~~~I~~~~~i~~~~~~v~IG~~~~I~~~~~I~~~~~~~~~Ig~~~~Ig~~~~i~~~~Ig~~- 96 (173)
T 1xhd_A 18 SAFIADYVTITGDVYVGEESSIWFNTVIRGDVSPTIIGDRVNVQDQCTLHQSPQYPLILEDDVTVGHQVILHSCHIKKD- 96 (173)
T ss_dssp TCEECTTCEEEEEEEECTTCEECTTCEEEEEEEEEEECTTCEECTTCEEECCTTCCEEECTTCEECTTCEEESCEECTT-
T ss_pred CcEECCCCEEECCEEECCCcEEcCCcEEecCCCeEEECCCCEECCCCEEEeCCCCCeEECCCCEECCCCEEeCCEECCC-
Confidence 3455555555555556666666 4555532 78999999998 8886 788999999999998877665544
Q ss_pred ccccccccccCCccccCCcceeEeCCCCee-cceEEecCcEECCCcEEe
Q 044626 346 FYQQGEDIQSSGKCINHKAIPVGIGEDTQI-KKAVIDKNARIGKNVLII 393 (429)
Q Consensus 346 ~~~~~~~~~~~~~~~~~~~~~~~ig~~~~i-~~~~ig~~~~ig~~~~i~ 393 (429)
+.||.++.| .++.||++|.|++++++.
T Consensus 97 ---------------------~~Ig~~~~i~~~~~Ig~~~~Ig~~s~V~ 124 (173)
T 1xhd_A 97 ---------------------ALIGMGSIILDGAEIGEGAFIGAGSLVS 124 (173)
T ss_dssp ---------------------CEECTTCEECTTCEECTTCEECTTCEEC
T ss_pred ---------------------CEEcCCCEEcCCCEECCCCEECCCCEEC
Confidence 778888877 467777777777777775
No 114
>3jqy_B NEUO, polysialic acid O-acetyltransferase; LEFT-handed beta-helix polysia; HET: PEG; 1.70A {Escherichia coli}
Probab=99.28 E-value=9.8e-12 Score=114.52 Aligned_cols=32 Identities=25% Similarity=0.311 Sum_probs=15.4
Q ss_pred eEECCCcEEcc-eEee---CcEEcCCcEECCCCEEe
Q 044626 306 SVVGDGCIINR-CKIK---GTVIGMRTRIGDGAVIE 337 (429)
Q Consensus 306 ~~ig~~~~i~~-~~v~---~~~ig~~~~ig~~~~i~ 337 (429)
+.||++|.|.+ +.+. +++||++|.|++++.|.
T Consensus 86 v~Ig~~~~I~~~~~i~~g~~v~IG~~~~Ig~~~~I~ 121 (252)
T 3jqy_B 86 VRIHKNSKIKGDIVATKGSKVIIGRRTTIGAGFEVV 121 (252)
T ss_dssp EEECTTCEEEEEEEEESSCEEEECTTCEECTTCEEE
T ss_pred EEECCCCEECCceEEccCCEEEECCCCEECCCcEEE
Confidence 34555555554 4442 34455555555555444
No 115
>3tk8_A 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N- succinyltransferase; ssgcid; 1.80A {Burkholderia pseudomallei}
Probab=99.27 E-value=1.7e-11 Score=115.78 Aligned_cols=96 Identities=15% Similarity=0.189 Sum_probs=51.7
Q ss_pred CCCCceecCCccCCCeEEeeeEe-eCeEECCCcEEcceEeeCcEEcCCcEECCCCEEecCeEECCcccccccccccCCcc
Q 044626 281 DRDCPVYTMPRCLPPTMIREAVI-RDSVVGDGCIINRCKIKGTVIGMRTRIGDGAVIEDSVIMGADFYQQGEDIQSSGKC 359 (429)
Q Consensus 281 ~~~~~~~~~~~i~~~~~i~~~~i-~~~~ig~~~~i~~~~v~~~~ig~~~~ig~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 359 (429)
.+.+.+..++.|++++.|....+ .++.||++|.|+. +++||++|.||++|.|..++.+++.... .
T Consensus 149 ~p~a~I~~~~~IG~g~~I~~~~I~~g~~IG~~~~I~~----~~~Ig~~~~IG~~v~I~~~~~I~~~~~~----~------ 214 (316)
T 3tk8_A 149 VPPAIARRGSFIAKNVVLMPSYTNIGAYVDEGTMVDT----WATVGSCAQIGKNVHLSGGVGIGGVLEP----L------ 214 (316)
T ss_dssp CTTCEEBTTCEECTTCEECSEEECTTCEECTTCEECT----TEEECTTCEECTTCEECTTCEECCCCSS----T------
T ss_pred eCCeEEeCCcEEcCCCEECCCEEeCCCEECCCCEEcc----ceEECCCCEECCCCEEcCCCEECCCccc----c------
Confidence 34444444445555554421122 3566677777766 5666777777777776666555541000 0
Q ss_pred ccCCcceeEeCCCCee-cceEEecCcEECCCcEEe
Q 044626 360 INHKAIPVGIGEDTQI-KKAVIDKNARIGKNVLII 393 (429)
Q Consensus 360 ~~~~~~~~~ig~~~~i-~~~~ig~~~~ig~~~~i~ 393 (429)
...++.||++|.| .+|+|+++++||++|+|+
T Consensus 215 ---~~~~v~IGd~v~IG~~a~I~~gv~IG~g~vIg 246 (316)
T 3tk8_A 215 ---QANPVIIEDNCFIGARSEVVEGVIVEENSVIS 246 (316)
T ss_dssp ---TSCCCEECTTCEECTTCEECTTCEECTTCEEC
T ss_pred ---cCCCcEECCCCEECCCCEEcCCCEECCCCEEc
Confidence 0112566666666 566666666666666665
No 116
>3r8y_A 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N- acetyltransferase; structural genomics, csgid; 1.70A {Bacillus anthracis} PDB: 3cj8_A*
Probab=99.26 E-value=2.2e-11 Score=111.38 Aligned_cols=105 Identities=19% Similarity=0.303 Sum_probs=67.1
Q ss_pred cceeCCCCceecCCccCCCeEE-eeeEe-eCeEECCCcEEcceEeeCcEEcCCcEECCCCEEecCeEECCcccccccccc
Q 044626 277 YNFYDRDCPVYTMPRCLPPTMI-REAVI-RDSVVGDGCIINRCKIKGTVIGMRTRIGDGAVIEDSVIMGADFYQQGEDIQ 354 (429)
Q Consensus 277 ~~~~~~~~~~~~~~~i~~~~~i-~~~~i-~~~~ig~~~~i~~~~v~~~~ig~~~~ig~~~~i~~~~~~~~~~~~~~~~~~ 354 (429)
.+.+++.+.+.+++.|++++.| .++.| .++.||++|.|+. +++|+.++.||++|.|+.++++.+.. . ..
T Consensus 91 ~~~I~~~a~I~~~v~Ig~~~~I~~~s~I~~~~~IG~~~~I~~----~~~I~~~~~IG~~~~I~~~~~i~~~~-~---~~- 161 (240)
T 3r8y_A 91 KARIEPGAIIRDHVEIGDNAVIMMNATINIGAVIGEGSMIDM----NAVLGGRATVGKNCHVGAGAVLAGVI-E---PP- 161 (240)
T ss_dssp SSEECTTCEEBSSCEECTTCEECTTCEECTTCEECTTCEECT----TCEECTTCEECTTCEECTTCEECCCC-S---CT-
T ss_pred CCEECCCCEECCCcEECCCCEECCCCEECCCCEECCCCEECC----CCEECCCCEECCCcEECCCcEECCCc-c---CC-
Confidence 4556666777777777777776 45555 4666677777766 66666666666666666666665411 0 00
Q ss_pred cCCccccCCcceeEeCCCCee-cceEEecCcEECCCcEEecCCCC
Q 044626 355 SSGKCINHKAIPVGIGEDTQI-KKAVIDKNARIGKNVLIINKDGV 398 (429)
Q Consensus 355 ~~~~~~~~~~~~~~ig~~~~i-~~~~ig~~~~ig~~~~i~~~~~~ 398 (429)
...++.||++|.| .+++|.++++||++|+|+.+..+
T Consensus 162 --------~~~~~~Ig~~~~IG~~~~I~~~~~Ig~~~~I~~gsvV 198 (240)
T 3r8y_A 162 --------SAKPVIVEDDVVIGANVVVLEGVTVGKGAVVAAGAVV 198 (240)
T ss_dssp --------TSCCCEECTTCEECTTCEECTTCEECTTCEECTTCEE
T ss_pred --------CCCCcEECCCCEECCCCEECCCcEECCCCEECCCCEE
Confidence 0112678888888 67888888888888888744333
No 117
>3gos_A 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N- succinyltransferase; 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransfera acyltransferase; 1.80A {Yersinia pestis} SCOP: b.81.1.2 PDB: 1kgq_A* 1kgt_A* 2tdt_A* 3tdt_A* 3bxy_A 1tdt_A
Probab=99.20 E-value=7.1e-11 Score=109.92 Aligned_cols=103 Identities=17% Similarity=0.301 Sum_probs=54.8
Q ss_pred CeEECCCcEEcceEe-eCcEEcCCcEECCCCEEecCeEECCcccccccccccCCccccCCcceeEeCCCCeec-------
Q 044626 305 DSVVGDGCIINRCKI-KGTVIGMRTRIGDGAVIEDSVIMGADFYQQGEDIQSSGKCINHKAIPVGIGEDTQIK------- 376 (429)
Q Consensus 305 ~~~ig~~~~i~~~~v-~~~~ig~~~~ig~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~~~i~------- 376 (429)
++.||++|.|++..+ .+++||++|.|++++.|.+++.++.. |.|+.++.|.
T Consensus 116 ~~~Ig~g~~I~~~~i~~~~~IG~~~~I~~~~~Ig~~~~IG~~---------------------v~I~~~~~i~g~~~~~~ 174 (276)
T 3gos_A 116 GAFIARNTVLMPSYVNIGAFVDEGTMVDTWATVGSCAQIGKN---------------------VHLSGGVGIGGVLEPLQ 174 (276)
T ss_dssp TCEECTTCEECSEEECTTCEECTTCEECTTEEECTTCEECTT---------------------CEECTTCEECCCCSSTT
T ss_pred CCEECCCCEEcCCEEcCCeEECCCCEECCCCEECCCCEECCC---------------------CEECCCCEECCccccCC
Confidence 445555555544111 15555555555555555554444432 5566666553
Q ss_pred --ceEEecCcEECCCcEEecCCCCCCCeeecCCeEEccCEEEEcCCC-------EeCCCccC
Q 044626 377 --KAVIDKNARIGKNVLIINKDGVQEGDREANGYIISEGIVVIIHGA-------EIADGSII 429 (429)
Q Consensus 377 --~~~ig~~~~ig~~~~i~~~~~~~~~~~~~~~~~i~~~~~~i~~~~-------~i~~~~vv 429 (429)
.++||++|.||++|+|..+..+++++.+|.+++|..+ +.|++.+ .|+++++|
T Consensus 175 ~~~v~IGd~v~IG~~a~I~~gv~IG~~avIgagsvV~~~-~~I~~~~~~~~~~g~Vp~~svv 235 (276)
T 3gos_A 175 ANPTIIEDNCFVGARSEVVEGVIVEEGSVISMGVFIGQS-TRIYDRETGEVHYGRVPAGSVV 235 (276)
T ss_dssp SCCCEECTTCEECTTCEECTTCEECTTCEECTTCEECTT-CCEEETTTCCEECSEECTTEEE
T ss_pred CCCeEECCCCEECCCCEECCCCEECCCCEECCCCEECCC-cEEccccccceeccccCCCcEE
Confidence 3667777777777766644444444444455555544 4444444 66666653
No 118
>3jqy_B NEUO, polysialic acid O-acetyltransferase; LEFT-handed beta-helix polysia; HET: PEG; 1.70A {Escherichia coli}
Probab=99.19 E-value=7.3e-11 Score=108.65 Aligned_cols=33 Identities=15% Similarity=0.331 Sum_probs=16.2
Q ss_pred eEECCCcEEcc-eEee----CcEEcCCcEECCCCEEec
Q 044626 306 SVVGDGCIINR-CKIK----GTVIGMRTRIGDGAVIED 338 (429)
Q Consensus 306 ~~ig~~~~i~~-~~v~----~~~ig~~~~ig~~~~i~~ 338 (429)
+.||++|.|++ +.+. +++||++|.||++|.|.+
T Consensus 106 v~IG~~~~Ig~~~~I~~~~~~~~IG~~~~Ig~~~~I~~ 143 (252)
T 3jqy_B 106 VIIGRRTTIGAGFEVVTDKCNVTIGHDCMIARDVILRA 143 (252)
T ss_dssp EEECTTCEECTTCEEECSSSEEEECTTCEECSSEEEEC
T ss_pred EEECCCCEECCCcEEEeCCCCeEECCCCEEcCCcEEec
Confidence 44555555555 4443 445555555555554443
No 119
>1qre_A Carbonic anhydrase; beta-helix, lyase; 1.46A {Methanosarcina thermophila} SCOP: b.81.1.5 PDB: 1qq0_A 1qrf_A 1qrg_A 1qrm_A 1qrl_A 1thj_A 3otm_A 3ow5_A 3ou9_A 3otz_A 3oup_A
Probab=99.19 E-value=1.2e-10 Score=106.87 Aligned_cols=110 Identities=18% Similarity=0.216 Sum_probs=75.6
Q ss_pred CcceeCCCCceecCCccCCCeEE-eeeEee-----CeEECCCcEEcc-eEee------------------------CcEE
Q 044626 276 RYNFYDRDCPVYTMPRCLPPTMI-REAVIR-----DSVVGDGCIINR-CKIK------------------------GTVI 324 (429)
Q Consensus 276 ~~~~~~~~~~~~~~~~i~~~~~i-~~~~i~-----~~~ig~~~~i~~-~~v~------------------------~~~i 324 (429)
+.+++++.+.+..++.|++++.| +++.+. ++.||++|.|++ +.+. +++|
T Consensus 64 ~~~~I~~~a~I~g~v~IG~~~~I~~~~~I~~~~~~~i~IG~~~~Ig~~~~I~~~~~~~~~g~~~~~~~~~~~~~~~~v~I 143 (247)
T 1qre_A 64 PTAYIDPQASVIGEVTIGANVMVSPMASIRSDEGMPIFVGDRSNVQDGVVLHALETINEEGEPIEDNIVEVDGKEYAVYI 143 (247)
T ss_dssp TTCEECTTCEEEESEEECTTCEECTTCEEEESSSCCEEECTTCEECTTCEEEECCSBCTTSCBCGGGCEEETTEEESEEE
T ss_pred CCcEECCCCEEeCCcEECCCCEECCCcEEecCCCCCEEECCCCEECCCeEEEecccccccCcccccceeeccCccCceEE
Confidence 34455555555444445555555 344431 347888888887 7764 3899
Q ss_pred cCCcEECCCCEEecCeEECCcccccccccccCCccccCCcceeEeCCCCeecceEEecCcEECCCcEEecCCCCCCCeee
Q 044626 325 GMRTRIGDGAVIEDSVIMGADFYQQGEDIQSSGKCINHKAIPVGIGEDTQIKKAVIDKNARIGKNVLIINKDGVQEGDRE 404 (429)
Q Consensus 325 g~~~~ig~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~~~i~~~~ig~~~~ig~~~~i~~~~~~~~~~~~ 404 (429)
|++|.||++|.|.++++++++ +.||.++.|.++.||++|.||+++++ .+ .++
T Consensus 144 G~~v~Ig~~~~I~~~~~Ig~~---------------------v~IG~~a~I~~v~Ig~~~~IgagsvV-~~------~~I 195 (247)
T 1qre_A 144 GNNVSLAHQSQVHGPAAVGDD---------------------TFIGMQAFVFKSKVGNNCVLEPRSAA-IG------VTI 195 (247)
T ss_dssp CTTCEECTTCEEEEEEEECTT---------------------CEECTTCEEEEEEECTTCEECTTCEE-ES------CEE
T ss_pred CCCCEECCCCEEcCCcEECCC---------------------CEECCCCEEeceEECCCCEECCCCEE-CC------eEe
Confidence 999999999999986766653 88999999866889999999999988 33 334
Q ss_pred cCCeEEccC
Q 044626 405 ANGYIISEG 413 (429)
Q Consensus 405 ~~~~~i~~~ 413 (429)
+++++++++
T Consensus 196 ~~~~~v~~g 204 (247)
T 1qre_A 196 PDGRYIPAG 204 (247)
T ss_dssp CTTBEECTT
T ss_pred CCCCEECCC
Confidence 445555444
No 120
>3c8v_A Putative acetyltransferase; YP_390128.1, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; 2.28A {Desulfovibrio desulfuricans subsp}
Probab=99.17 E-value=7e-11 Score=117.84 Aligned_cols=96 Identities=10% Similarity=0.092 Sum_probs=81.9
Q ss_pred CcceeCCCCceecCCccCCCeEE-eeeEeeCeEECCCcEEcc-eEeeCcEEcCCcEECCCCEEecCeEECCccccccccc
Q 044626 276 RYNFYDRDCPVYTMPRCLPPTMI-REAVIRDSVVGDGCIINR-CKIKGTVIGMRTRIGDGAVIEDSVIMGADFYQQGEDI 353 (429)
Q Consensus 276 ~~~~~~~~~~~~~~~~i~~~~~i-~~~~i~~~~ig~~~~i~~-~~v~~~~ig~~~~ig~~~~i~~~~~~~~~~~~~~~~~ 353 (429)
+.+++++.+.+..++.|++++.| +++.|.++.||++|.|++ +.+.+++||++|.|++++.|.++++.++
T Consensus 278 ~~a~I~p~a~i~g~v~IG~~~~I~~~a~I~~v~IG~~~~I~~~~~I~~~vIG~~~~Ig~~a~I~gv~IGd~--------- 348 (496)
T 3c8v_A 278 SGASVSGYAVIKGDTVIGENVLVSQRAYLDNAWMGKGSNAQENCYIINSRLERNCVTAHGGKIINAHLGDM--------- 348 (496)
T ss_dssp TTCEECTTSEEESSCEECTTCEECTTCEEEEEEECTTCEECTTCEEEEEEEEESCEECTTCEEESEEEEET---------
T ss_pred CCcEECCCcEEeCCeEECCCCEECCCcEEeceEecCCCEECCCceEeceEeCCCCEECCCcEEcCceECCC---------
Confidence 44677777777777888888888 678888999999999999 9999999999999999999998666555
Q ss_pred ccCCccccCCcceeEeCCCCeec-c----eEEecCcEECCCcEEe
Q 044626 354 QSSGKCINHKAIPVGIGEDTQIK-K----AVIDKNARIGKNVLII 393 (429)
Q Consensus 354 ~~~~~~~~~~~~~~~ig~~~~i~-~----~~ig~~~~ig~~~~i~ 393 (429)
+.||.++.|. + ++||++|.||.++++.
T Consensus 349 -------------v~IG~~a~I~~~~~~~v~IG~~a~IGagsvV~ 380 (496)
T 3c8v_A 349 -------------IFTGFNSFLQGSESSPLKIGDGCVVMPHTIID 380 (496)
T ss_dssp -------------CEECTTCEEECCSSSCEEECTTCEECTTCEEE
T ss_pred -------------cEECCCCEEeCCCCcceEECCCCEECCCCEEe
Confidence 8999999994 4 5899999999888886
No 121
>3nz2_A Hexapeptide-repeat containing-acetyltransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: ACO; 2.35A {Vibrio cholerae o1 biovar eltor} SCOP: b.81.1.0 PDB: 3ect_A*
Probab=99.16 E-value=1.3e-10 Score=102.54 Aligned_cols=52 Identities=19% Similarity=0.182 Sum_probs=35.9
Q ss_pred eecCCccCCCeEE-eeeEeeCeEECCCcEEcc-eEee---CcEEcCCcEECCCCEEecCe
Q 044626 286 VYTMPRCLPPTMI-REAVIRDSVVGDGCIINR-CKIK---GTVIGMRTRIGDGAVIEDSV 340 (429)
Q Consensus 286 ~~~~~~i~~~~~i-~~~~i~~~~ig~~~~i~~-~~v~---~~~ig~~~~ig~~~~i~~~~ 340 (429)
++.++.|.+|... .+ .++.||++|+|+. +.+. .++||++|.||++|.|.++.
T Consensus 59 ig~~~~I~~p~~~~ig---~~v~IG~~~~I~~~~~i~~~~~i~IG~~~~Ig~~~~I~~~~ 115 (195)
T 3nz2_A 59 LGHKSCVQPPFHCEFG---KTIRIGDHTFINMNVVMLDGAPITIGDHVLIGPSTQFYTAS 115 (195)
T ss_dssp ECTTCEECSSEEESCS---TTEEECTTCEECTTEEEECSSCEEECTTCEECTTCEEECEE
T ss_pred cCCCcEEcCCeEEEeC---CCeEECCCcEECcCCEEecCceEEECCCCEECCCCEEecCC
Confidence 4455566666543 11 4678888888888 6663 35888888888888887654
No 122
>3r5d_A Tetrahydrodipicolinate N-succinyletransferase; 1.80A {Pseudomonas aeruginosa} PDB: 3r5b_A* 3r5c_A* 3r5a_A
Probab=99.15 E-value=3.3e-11 Score=112.04 Aligned_cols=48 Identities=19% Similarity=0.278 Sum_probs=27.8
Q ss_pred eEeCCCCeecc---------eEEecCcEECCCcEEecCCCCCCCeeecCCeEEccCEEEEcCCCEe
Q 044626 367 VGIGEDTQIKK---------AVIDKNARIGKNVLIINKDGVQEGDREANGYIISEGIVVIIHGAEI 423 (429)
Q Consensus 367 ~~ig~~~~i~~---------~~ig~~~~ig~~~~i~~~~~~~~~~~~~~~~~i~~~~~~i~~~~~i 423 (429)
|.|++++.|.+ ++||++|.||++++| + .++|++|+|++| ++|.+++.|
T Consensus 237 v~IgpGa~IgG~~~~~~~~~V~IGdnv~IGAnAtI--G------VtIGd~~iIGAG-SVVtkdt~I 293 (347)
T 3r5d_A 237 SDLGGGCSTMGTLSGGGNIVISVGEGCLIGANAGI--G------IPLGDRNIVEAG-LYITAGTKV 293 (347)
T ss_dssp EEECTTCEECC------CCCCEECTTCEECTTCEE--C------SCBCTTCEECTT-CEECTTCEE
T ss_pred CEECCCCEEccccCCCCccceEECCCCEECCCCEE--e------eEECCCCEECCC-CEECCCCEE
Confidence 55555555533 677777777777777 2 344555555555 455554444
No 123
>3r5d_A Tetrahydrodipicolinate N-succinyletransferase; 1.80A {Pseudomonas aeruginosa} PDB: 3r5b_A* 3r5c_A* 3r5a_A
Probab=99.14 E-value=1.7e-10 Score=107.25 Aligned_cols=66 Identities=15% Similarity=0.293 Sum_probs=35.8
Q ss_pred CeEECCCcEEcc-eEeeCcEEcCCcEECCCCEEecC--------eEECCcccccccccccCCccccCCcceeEeCCCCee
Q 044626 305 DSVVGDGCIINR-CKIKGTVIGMRTRIGDGAVIEDS--------VIMGADFYQQGEDIQSSGKCINHKAIPVGIGEDTQI 375 (429)
Q Consensus 305 ~~~ig~~~~i~~-~~v~~~~ig~~~~ig~~~~i~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~~~i 375 (429)
++.||++|.|.. +.+ .++||++|.|+++|.|.+. ++++++ |.||.++.|
T Consensus 214 na~IGdg~iI~~~a~i-gv~IGdnv~IgpGa~IgG~~~~~~~~~V~IGdn---------------------v~IGAnAtI 271 (347)
T 3r5d_A 214 NAGTEGPGMIEGRVSA-GVFVGKGSDLGGGCSTMGTLSGGGNIVISVGEG---------------------CLIGANAGI 271 (347)
T ss_dssp TEEESSSEEECSEECT-TCEECTTEEECTTCEECC------CCCCEECTT---------------------CEECTTCEE
T ss_pred CCEECCCcEEcCCceE-eEEECCCCEECCCCEEccccCCCCccceEECCC---------------------CEECCCCEE
Confidence 445555555554 333 3666666666666666553 333321 555555555
Q ss_pred cceEEecCcEECCCcEEe
Q 044626 376 KKAVIDKNARIGKNVLII 393 (429)
Q Consensus 376 ~~~~ig~~~~ig~~~~i~ 393 (429)
++.||++|+||+|++|.
T Consensus 272 -GVtIGd~~iIGAGSVVt 288 (347)
T 3r5d_A 272 -GIPLGDRNIVEAGLYIT 288 (347)
T ss_dssp -CSCBCTTCEECTTCEEC
T ss_pred -eeEECCCCEECCCCEEC
Confidence 55555555555555555
No 124
>3q1x_A Serine acetyltransferase; cysteine biosynthesis, LEFT handed helix, OASS; 1.59A {Entamoeba histolytica} PDB: 3p47_A 3p1b_A
Probab=99.14 E-value=7.4e-11 Score=110.79 Aligned_cols=30 Identities=10% Similarity=0.117 Sum_probs=16.9
Q ss_pred eEEecCcEECCCcEEecCCCCCCCeeecCCeEEccC
Q 044626 378 AVIDKNARIGKNVLIINKDGVQEGDREANGYIISEG 413 (429)
Q Consensus 378 ~~ig~~~~ig~~~~i~~~~~~~~~~~~~~~~~i~~~ 413 (429)
++||++|.||++|+|. ++.+||++++||+|
T Consensus 224 ~~IGd~v~IGaga~Il------ggv~IG~~a~IGag 253 (313)
T 3q1x_A 224 PTVGDYVTIGTGAKVL------GNIIVGSHVRIGAN 253 (313)
T ss_dssp CEECSSCEECTTCEEE------SSCEECSSEEECTT
T ss_pred CEECCCCEECCCCEEC------CCcEECCCCEECCC
Confidence 4666666666666665 33444444444444
No 125
>3hjj_A Maltose O-acetyltransferase; LEFT-handed beta-helix, acyltransferase, struct genomics; 2.15A {Bacillus anthracis} SCOP: b.81.1.0 PDB: 3igj_A*
Probab=99.13 E-value=1.4e-10 Score=101.94 Aligned_cols=50 Identities=20% Similarity=0.160 Sum_probs=35.4
Q ss_pred CCccCCCeEE-eeeEeeCeEECCCcEEcc-eEee---CcEEcCCcEECCCCEEecCeE
Q 044626 289 MPRCLPPTMI-REAVIRDSVVGDGCIINR-CKIK---GTVIGMRTRIGDGAVIEDSVI 341 (429)
Q Consensus 289 ~~~i~~~~~i-~~~~i~~~~ig~~~~i~~-~~v~---~~~ig~~~~ig~~~~i~~~~~ 341 (429)
++.|.|++.+ .+ .++.||++++|++ +.+. +++||++|.||++|.|.++..
T Consensus 64 ~~~I~~~~~~~~g---~~v~IG~~~~I~~~~~i~~~~~v~IG~~~~Ig~~~~I~~~~~ 118 (190)
T 3hjj_A 64 KAQINPDFRCDYG---YNIHVGKSFFANFNCVILDVCEVRIGDHCMFAPGVHIYTATH 118 (190)
T ss_dssp CCEECSSCEESSS---TTEEECTTCEECTTCEEECSSCEEECTTCEECTTCEEECEEC
T ss_pred CcEECCCEEEEeC---CceEECCceeeCCCeEEEeCCCeEECCceEEcCCcEEecCCc
Confidence 5556666655 21 4678888888888 6664 568888888888888876543
No 126
>3st8_A Bifunctional protein GLMU; acetyltransferase, pyrophosphorylase, rossmann fold, LEFT-handed-beta-helix, cell shape; HET: COA GP1 UD1; 1.98A {Mycobacterium tuberculosis} PDB: 3spt_A* 3foq_A 3dk5_A 3d8v_A 3d98_A* 3dj4_A 2qkx_A*
Probab=99.13 E-value=2.1e-10 Score=116.31 Aligned_cols=92 Identities=16% Similarity=0.326 Sum_probs=55.8
Q ss_pred CeEECCCcEEcc-eEeeCcEEcCCcEECCCCEEecCeEECCcccccccccccCCccccCCcceeEeCCCCeec-------
Q 044626 305 DSVVGDGCIINR-CKIKGTVIGMRTRIGDGAVIEDSVIMGADFYQQGEDIQSSGKCINHKAIPVGIGEDTQIK------- 376 (429)
Q Consensus 305 ~~~ig~~~~i~~-~~v~~~~ig~~~~ig~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~~~i~------- 376 (429)
++.|+++|.|+. +.+++++||++|.|++.+.+.++.|..+ |.||.+|.+.
T Consensus 352 ~~~i~~~v~IG~~v~ik~s~Ig~gskI~~~~~i~d~~Ig~~----------------------v~IG~g~i~~n~dg~~~ 409 (501)
T 3st8_A 352 GTALGADGKLGAFVEVKNSTIGTGTKVPHLTYVGDADIGEY----------------------SNIGASSVFVNYDGTSK 409 (501)
T ss_dssp TCEECTTCEEEETEEEESCEECTTCEEEESCEEESEEECSS----------------------CEECTTCEEECBCSSSB
T ss_pred CcEEccccccCCeEEEccceecCCcEEeccceecCceEcCC----------------------CEECCCEEEEcccCCcc
Confidence 445555555555 5555555555555555555555444443 6777776652
Q ss_pred -ceEEecCcEECCCcEEecCCCCCCCeeecCCeEEccCEEEEcCCCEeCCCc
Q 044626 377 -KAVIDKNARIGKNVLIINKDGVQEGDREANGYIISEGIVVIIHGAEIADGS 427 (429)
Q Consensus 377 -~~~ig~~~~ig~~~~i~~~~~~~~~~~~~~~~~i~~~~~~i~~~~~i~~~~ 427 (429)
+++||++|.||.++.|. .+.+||++++|++| ++|.+. |++++
T Consensus 410 ~~t~IGd~~~iG~~~~l~------~~v~Ig~~~~i~ag-s~v~~d--vp~~~ 452 (501)
T 3st8_A 410 RRTTVGSHVRTGSDTMFV------APVTIGDGAYTGAG-TVVRED--VPPGA 452 (501)
T ss_dssp CCEEECTTCEECTTCEEE------SSEEECTTCEECTT-CEECSC--BCTTC
T ss_pred cCCEECCCcEECCCCEEc------CCcEECCCCEECCC-CEECcc--cCCCC
Confidence 26666666666666665 67888888888888 566553 35554
No 127
>4ea9_A Perosamine N-acetyltransferase; beta helix, acetyl coenzyme A, GDP-perosa transferase; HET: JBT; 0.90A {Caulobacter vibrioides} PDB: 4ea8_A* 4ea7_A* 4eaa_A* 4eab_A*
Probab=99.11 E-value=7.7e-10 Score=99.67 Aligned_cols=93 Identities=16% Similarity=0.266 Sum_probs=53.4
Q ss_pred CcceeCCCCceecCCccCCCeEEeeeEeeCeEECCCcEEcc-eEee-CcEEcCCcEECCCCEEecCeEECCccccccccc
Q 044626 276 RYNFYDRDCPVYTMPRCLPPTMIREAVIRDSVVGDGCIINR-CKIK-GTVIGMRTRIGDGAVIEDSVIMGADFYQQGEDI 353 (429)
Q Consensus 276 ~~~~~~~~~~~~~~~~i~~~~~i~~~~i~~~~ig~~~~i~~-~~v~-~~~ig~~~~ig~~~~i~~~~~~~~~~~~~~~~~ 353 (429)
+.+.+++.+.+++++.|++++++. .++.||++|.|+. +.+. +++||++|.|++++.|.+++++++.
T Consensus 104 ~~a~i~~~v~IG~g~~I~~~~~i~----~~~~IG~~~~I~~~~~I~~~~~Ig~~~~i~~~~~i~~~v~Ig~~-------- 171 (220)
T 4ea9_A 104 PSAVVSPSVRLGEGVAVMAGVAIN----ADSWIGDLAIINTGAVVDHDCRLGAACHLGPASALAGGVSVGER-------- 171 (220)
T ss_dssp TTCEECTTCEECSSCEECTTCEEC----TTCEECTTCEECTTCEECTTCEECTTCEECTTCEECSSCEECTT--------
T ss_pred CCCEECCCCEECCCCEEcCCCEEC----CCCEECCCCEECCCCEECCCCEECCCCEECCCCEEcCCCEECCC--------
Confidence 445566777777777777777664 4566777777776 4442 4555555555555555554444432
Q ss_pred ccCCccccCCcceeEeCCCCee-cceEEecCcEECCCcEEe
Q 044626 354 QSSGKCINHKAIPVGIGEDTQI-KKAVIDKNARIGKNVLII 393 (429)
Q Consensus 354 ~~~~~~~~~~~~~~~ig~~~~i-~~~~ig~~~~ig~~~~i~ 393 (429)
+.||.++.| .++.||++|+||+++++.
T Consensus 172 -------------~~Ig~~~~i~~~~~Ig~~~~igagsvv~ 199 (220)
T 4ea9_A 172 -------------AFLGVGARVIPGVTIGADTIVGAGGVVV 199 (220)
T ss_dssp -------------CEECTTCEECTTCEECTTCEECTTCEEC
T ss_pred -------------CEECCCCEEcCCcEECCCCEECCCCEEc
Confidence 455555555 445555555555555553
No 128
>1krr_A Galactoside O-acetyltransferase; LEFT-handed parallel beta helix; HET: ACO; 2.50A {Escherichia coli} SCOP: b.81.1.3 PDB: 1kqa_A* 1kru_A* 1krv_A*
Probab=99.09 E-value=4.5e-10 Score=99.36 Aligned_cols=51 Identities=18% Similarity=0.167 Sum_probs=37.9
Q ss_pred eecCCccCCCeEE-eeeEeeCeEECCCcEEcc-eEeeC---cEEcCCcEECCCCEEecC
Q 044626 286 VYTMPRCLPPTMI-REAVIRDSVVGDGCIINR-CKIKG---TVIGMRTRIGDGAVIEDS 339 (429)
Q Consensus 286 ~~~~~~i~~~~~i-~~~~i~~~~ig~~~~i~~-~~v~~---~~ig~~~~ig~~~~i~~~ 339 (429)
++.++.|.|++.+ .+ .++.||++|+|+. +.+.+ ++||++|.||++|.|...
T Consensus 58 ig~~~~I~~~~~~~~g---~~i~IG~~~~I~~~~~i~~~~~i~IG~~v~Ig~~v~I~~~ 113 (203)
T 1krr_A 58 VGENAWVEPPVYFSYG---SNIHIGRNFYANFNLTIVDDYTVTIGDNVLIAPNVTLSVT 113 (203)
T ss_dssp CCSSCEECSCEEESCS---TTEEECSSCEECSCEEEECSSCEEECSSCEECSSCEEESE
T ss_pred cCCCcEEcCCeEEEeC---CCeEECCeeEECCccEEecccceEECCCCEECCCCEEecC
Confidence 4556667777654 21 5788999999998 77753 789999999999888654
No 129
>3bfp_A Acetyltransferase; LEFT-handed beta helix, COA binding protein, N-glycan biosynthesis, bacillosamine, structural genomics, MKBSGI; HET: FLC; 1.75A {Campylobacter jejuni} SCOP: b.81.1.8 PDB: 2vhe_A* 3bsw_A* 3bss_A* 3bsy_A* 2npo_A
Probab=99.08 E-value=8.9e-10 Score=97.20 Aligned_cols=43 Identities=21% Similarity=0.251 Sum_probs=21.3
Q ss_pred ccCCCeEEeeeEeeCeEEC--CCcEEcc-eEee-CcEEcCCcEECCCCEEe
Q 044626 291 RCLPPTMIREAVIRDSVVG--DGCIINR-CKIK-GTVIGMRTRIGDGAVIE 337 (429)
Q Consensus 291 ~i~~~~~i~~~~i~~~~ig--~~~~i~~-~~v~-~~~ig~~~~ig~~~~i~ 337 (429)
.++|++.+. +++.|| ++|+|++ +.+. +++||++|.|++++.|+
T Consensus 77 ~i~~~a~i~----~~~~Ig~~~g~~I~~~~~I~~~~~IG~~~~I~~~~~i~ 123 (194)
T 3bfp_A 77 LIHKSALIS----PSAIVEENAGILIMPYVVINAKAKIEKGVILNTSSVIE 123 (194)
T ss_dssp EECTTCEEC----TTCEECTTSCCEECTTCEECTTCEECTTCEECTTCEEC
T ss_pred ccCCeEEEC----CCceeCCCCCcEEcCCCEECCCCEECCCCEECCCCEEc
Confidence 355555553 456667 6777766 3221 34444444444444443
No 130
>2wlg_A Polysialic acid O-acetyltransferase; enzyme, LEFT-handed beta HEL; HET: SOP; 1.90A {Neisseria meningitidis serogroup Y} PDB: 2wld_A 2wle_A* 2wlf_A* 2wlc_A*
Probab=99.08 E-value=6.9e-10 Score=99.59 Aligned_cols=27 Identities=19% Similarity=0.153 Sum_probs=13.6
Q ss_pred eEECCCcEEcc-eEeeC----cEEcCCcEECC
Q 044626 306 SVVGDGCIINR-CKIKG----TVIGMRTRIGD 332 (429)
Q Consensus 306 ~~ig~~~~i~~-~~v~~----~~ig~~~~ig~ 332 (429)
+.||++|.|++ +.+.. ++||++|.|++
T Consensus 59 v~IG~~~~I~~~~~i~~~~~~~~IG~~~~Ig~ 90 (215)
T 2wlg_A 59 LFIADDVEIMGLVCSLHSDCSLQIQAKTTMGN 90 (215)
T ss_dssp EEECTTCEEESEEEEECTTCEEEECTTCEECS
T ss_pred EEECCCCEECCCeEEEcCCceEEEcCCCEECC
Confidence 45555555555 44432 45555555554
No 131
>3fsy_A Tetrahydrodipicolinate N-succinyltransferase; beta helix, L beta H domain, acyltransferase; HET: SCA; 1.97A {Mycobacterium tuberculosis} PDB: 3fsx_A*
Probab=99.08 E-value=4.3e-10 Score=103.83 Aligned_cols=15 Identities=27% Similarity=0.319 Sum_probs=7.0
Q ss_pred eEEecCcEECCCcEE
Q 044626 378 AVIDKNARIGKNVLI 392 (429)
Q Consensus 378 ~~ig~~~~ig~~~~i 392 (429)
+.||++|.||++++|
T Consensus 234 V~IGDnv~IGanAtI 248 (332)
T 3fsy_A 234 ISIGKRCLLGANSGL 248 (332)
T ss_dssp CEECTTCEECTTCEE
T ss_pred eEECCCCEECCCCEE
Confidence 444444444444444
No 132
>2wlg_A Polysialic acid O-acetyltransferase; enzyme, LEFT-handed beta HEL; HET: SOP; 1.90A {Neisseria meningitidis serogroup Y} PDB: 2wld_A 2wle_A* 2wlf_A* 2wlc_A*
Probab=99.06 E-value=4.1e-10 Score=101.08 Aligned_cols=102 Identities=20% Similarity=0.243 Sum_probs=54.0
Q ss_pred eEECCCcEEcc--eEeeC----cEEcCCcEECCCCEEec---CeEECCcccccccccccCCccccCCcceeEeCCCCee-
Q 044626 306 SVVGDGCIINR--CKIKG----TVIGMRTRIGDGAVIED---SVIMGADFYQQGEDIQSSGKCINHKAIPVGIGEDTQI- 375 (429)
Q Consensus 306 ~~ig~~~~i~~--~~v~~----~~ig~~~~ig~~~~i~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~~~i- 375 (429)
+.|+++|.|.+ +.+.. ++||++|.|++++.|.. .+.++.. +.|++.+.+
T Consensus 37 v~Ig~~~~I~~~~~~i~g~~~~v~IG~~~~I~~~~~i~~~~~~~~IG~~---------------------~~Ig~~~ii~ 95 (215)
T 2wlg_A 37 VYIGNNCKIVSSNIRLKGNNITLFIADDVEIMGLVCSLHSDCSLQIQAK---------------------TTMGNGEITI 95 (215)
T ss_dssp EEECTTCEEESCEEEEESSSCEEEECTTCEEESEEEEECTTCEEEECTT---------------------CEECSEEEEE
T ss_pred EEECCCCEEeCceEEEEcCCCEEEECCCCEECCCeEEEcCCceEEEcCC---------------------CEECCEEEEE
Confidence 56666666655 23322 56666666666666543 2444432 455553333
Q ss_pred ---cceEEecCcEECCCcEEecCC-------------------CCCCCeeecCCeEEccCEEEEcCCCEeCCCccC
Q 044626 376 ---KKAVIDKNARIGKNVLIINKD-------------------GVQEGDREANGYIISEGIVVIIHGAEIADGSII 429 (429)
Q Consensus 376 ---~~~~ig~~~~ig~~~~i~~~~-------------------~~~~~~~~~~~~~i~~~~~~i~~~~~i~~~~vv 429 (429)
.++.||++|.|+++|.|.+.. .++++..+|.++.|.+| ++||++++|+++|+|
T Consensus 96 ~~~~~i~IG~~~~Ig~~~~I~~~~~h~~~~~~~~~~~~~~~~v~Igd~v~IG~~~~I~~g-v~Ig~~~vIgagsvV 170 (215)
T 2wlg_A 96 AEKGKISIGKDCMLAHGYEIRNTDMHPIYSLENGERINHGKDVIIGNHVWLGRNVTILKG-VCIPNNVVVGSHTVL 170 (215)
T ss_dssp CTTCEEEECTTCEECTTEEEESCCSSCEEETTTCBBCCCCCCEEECTTCEECTTCEECTT-CEECSSCEECTTCEE
T ss_pred eCCCCEEECCCCEEcCCEEEECCCCcccccccccccccCCCCeEECCCcEECCCCEECCC-CEECCCCEECCCCEE
Confidence 456677777777777776431 22233333444444444 566666666666653
No 133
>3fsy_A Tetrahydrodipicolinate N-succinyltransferase; beta helix, L beta H domain, acyltransferase; HET: SCA; 1.97A {Mycobacterium tuberculosis} PDB: 3fsx_A*
Probab=99.01 E-value=1e-09 Score=101.39 Aligned_cols=26 Identities=4% Similarity=0.236 Sum_probs=13.7
Q ss_pred eEeCCCCeecceEEecCcEECCCcEEe
Q 044626 367 VGIGEDTQIKKAVIDKNARIGKNVLII 393 (429)
Q Consensus 367 ~~ig~~~~i~~~~ig~~~~ig~~~~i~ 393 (429)
|.||.++.| ++.||++|+||+|++|.
T Consensus 240 v~IGanAtI-gVtIGd~~iIGAGSVVt 265 (332)
T 3fsy_A 240 CLLGANSGL-GISLGDDCVVEAGLYVT 265 (332)
T ss_dssp CEECTTCEE-CSCBCSSCEECTTCEEC
T ss_pred CEECCCCEE-eeEECCCCEECCCCEEC
Confidence 455555555 55555555555555554
No 134
>3ftt_A Putative acetyltransferase sacol2570; galactoside O-acetyltransferase, enzyme, structural genomics, acyltransferase; 1.60A {Staphylococcus aureus subsp} PDB: 3v4e_A* 4dcl_A 4egg_A
Probab=99.00 E-value=1.3e-09 Score=96.59 Aligned_cols=52 Identities=15% Similarity=0.127 Sum_probs=35.9
Q ss_pred eecCCccCCCeEE-eeeEeeCeEECCCcEEcc-eEee---CcEEcCCcEECCCCEEecCe
Q 044626 286 VYTMPRCLPPTMI-REAVIRDSVVGDGCIINR-CKIK---GTVIGMRTRIGDGAVIEDSV 340 (429)
Q Consensus 286 ~~~~~~i~~~~~i-~~~~i~~~~ig~~~~i~~-~~v~---~~~ig~~~~ig~~~~i~~~~ 340 (429)
++.++.|.+++.+ .+ .++.||++|+|++ +.+. .++||++|.||++|.|..+.
T Consensus 57 ~g~~~~i~~~~~~~~g---~~~~IG~~~~I~~~~~i~~~~~v~IG~~v~Ig~~~~I~~~~ 113 (199)
T 3ftt_A 57 TTDNVSISIPFDTDYG---WNVKLGKNVYVNTNCYFMDGGQITIGDNVFIGPNCGFYTAT 113 (199)
T ss_dssp CCSSEEECSSEEESSS---TTEEECSSEEECTTEEEECSSCEEECSSEEECTTCEEECEE
T ss_pred cCCCeEEeCCEEEEec---CCcEECCCeEECCCeEEecCCEEEECCCCEECCCCEEecCC
Confidence 3445556666655 11 4677888888887 6663 36899999999999886544
No 135
>3hjj_A Maltose O-acetyltransferase; LEFT-handed beta-helix, acyltransferase, struct genomics; 2.15A {Bacillus anthracis} SCOP: b.81.1.0 PDB: 3igj_A*
Probab=99.00 E-value=2e-09 Score=94.57 Aligned_cols=18 Identities=22% Similarity=0.109 Sum_probs=9.9
Q ss_pred CcEEcCCcEECCCCEEec
Q 044626 321 GTVIGMRTRIGDGAVIED 338 (429)
Q Consensus 321 ~~~ig~~~~ig~~~~i~~ 338 (429)
++.||++|.|+++|+|.+
T Consensus 78 ~v~IG~~~~I~~~~~i~~ 95 (190)
T 3hjj_A 78 NIHVGKSFFANFNCVILD 95 (190)
T ss_dssp TEEECTTCEECTTCEEEC
T ss_pred ceEECCceeeCCCeEEEe
Confidence 455555555555555543
No 136
>3srt_A Maltose O-acetyltransferase; structural genomics, the center structural genomics of infectious diseases, csgid; 2.50A {Clostridium difficile} PDB: 4ebh_A*
Probab=98.98 E-value=4.9e-09 Score=91.86 Aligned_cols=51 Identities=16% Similarity=0.083 Sum_probs=35.9
Q ss_pred eecCCccCCCeEE-eeeEeeCeEECCCcEEcc-eEee---CcEEcCCcEECCCCEEecC
Q 044626 286 VYTMPRCLPPTMI-REAVIRDSVVGDGCIINR-CKIK---GTVIGMRTRIGDGAVIEDS 339 (429)
Q Consensus 286 ~~~~~~i~~~~~i-~~~~i~~~~ig~~~~i~~-~~v~---~~~ig~~~~ig~~~~i~~~ 339 (429)
++.++.|.+++.+ .+ .++.||++++|+. +.+. ..+||++|.||++|.|...
T Consensus 59 ig~~~~I~~~~~~~~g---~~~~IG~~~~i~~~~~i~~~~~i~IG~~~~Ig~~v~I~~~ 114 (188)
T 3srt_A 59 VGKQINVEQNIRCDYG---YNIHVGENFFANYDCIFLDVCKIEIGDNVMLAPNVQIYTA 114 (188)
T ss_dssp CCSCEEECSCEEESSS---TTEEECTTEEECTTEEEECSSCEEECSSCEECTTCEEECE
T ss_pred cCCCCEEcCCEEEEeC---CCeEECCcccccCceEEecCCceEECCeeEECCCcEEeeC
Confidence 4455566677666 22 4678888888888 6665 3488888888888888543
No 137
>3ftt_A Putative acetyltransferase sacol2570; galactoside O-acetyltransferase, enzyme, structural genomics, acyltransferase; 1.60A {Staphylococcus aureus subsp} PDB: 3v4e_A* 4dcl_A 4egg_A
Probab=98.97 E-value=4.1e-09 Score=93.25 Aligned_cols=15 Identities=20% Similarity=0.432 Sum_probs=5.5
Q ss_pred eEEecCcEECCCcEE
Q 044626 378 AVIDKNARIGKNVLI 392 (429)
Q Consensus 378 ~~ig~~~~ig~~~~i 392 (429)
+.||++|+||+++++
T Consensus 149 v~IG~~~vIgagsvV 163 (199)
T 3ftt_A 149 VTIGEGSVIGAGSVV 163 (199)
T ss_dssp CEECTTCEECTTCEE
T ss_pred CEECCCCEECCCCEE
Confidence 333333333333333
No 138
>2rij_A Putative 2,3,4,5-tetrahydropyridine-2-carboxylate succinyltransferase; structural genomics, joint center for structural genomics; HET: MSE CIT; 1.90A {Campylobacter jejuni}
Probab=98.97 E-value=1.7e-09 Score=103.55 Aligned_cols=21 Identities=19% Similarity=0.281 Sum_probs=16.0
Q ss_pred ceEEecCC--HHHHHHHhHhhhc
Q 044626 251 GYWEDMRS--IEAFYHANMECIK 271 (429)
Q Consensus 251 ~~~~~i~t--~~~~~~an~~~l~ 271 (429)
.+|.+.+. |+.|......+..
T Consensus 170 ~~Wt~~G~~~~~~f~~~~~~l~~ 192 (387)
T 2rij_A 170 VAWSDDKPIELEYLRANEMRLKM 192 (387)
T ss_dssp EEEETTEEECHHHHHHHHHHHHH
T ss_pred eeeccCcccCHHHHHHHHHHHHh
Confidence 47998888 6788777777663
No 139
>3srt_A Maltose O-acetyltransferase; structural genomics, the center structural genomics of infectious diseases, csgid; 2.50A {Clostridium difficile} PDB: 4ebh_A*
Probab=98.97 E-value=1.9e-09 Score=94.55 Aligned_cols=18 Identities=11% Similarity=0.073 Sum_probs=10.1
Q ss_pred CcEEcCCcEECCCCEEec
Q 044626 321 GTVIGMRTRIGDGAVIED 338 (429)
Q Consensus 321 ~~~ig~~~~ig~~~~i~~ 338 (429)
++.||+++.|+.+|.|.+
T Consensus 76 ~~~IG~~~~i~~~~~i~~ 93 (188)
T 3srt_A 76 NIHVGENFFANYDCIFLD 93 (188)
T ss_dssp TEEECTTEEECTTEEEEC
T ss_pred CeEECCcccccCceEEec
Confidence 455555555555555543
No 140
>3nz2_A Hexapeptide-repeat containing-acetyltransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: ACO; 2.35A {Vibrio cholerae o1 biovar eltor} SCOP: b.81.1.0 PDB: 3ect_A*
Probab=98.97 E-value=3.3e-09 Score=93.52 Aligned_cols=8 Identities=0% Similarity=0.189 Sum_probs=2.9
Q ss_pred CCeEEccC
Q 044626 406 NGYIISEG 413 (429)
Q Consensus 406 ~~~~i~~~ 413 (429)
++++|++|
T Consensus 155 ~~~vIgag 162 (195)
T 3nz2_A 155 ARSVVAAN 162 (195)
T ss_dssp TTCEECTT
T ss_pred CCCEECCC
Confidence 33333333
No 141
>4hur_A Virginiamycin A acetyltransferase; structural genomics, antibiotic resistance, center for struc genomics of infectious diseases (csgid); HET: ACO; 2.15A {Staphylococcus aureus} PDB: 4hus_A* 4e8l_A
Probab=98.94 E-value=1.3e-09 Score=98.15 Aligned_cols=32 Identities=28% Similarity=0.470 Sum_probs=16.3
Q ss_pred cceEEecCcEECCCcEEecCCCCCCCeeecCCeEEccC
Q 044626 376 KKAVIDKNARIGKNVLIINKDGVQEGDREANGYIISEG 413 (429)
Q Consensus 376 ~~~~ig~~~~ig~~~~i~~~~~~~~~~~~~~~~~i~~~ 413 (429)
..++||++|.||++|+|. .+.++|++++|+++
T Consensus 118 g~v~IG~~v~IG~~a~I~------~gv~IG~gavIgag 149 (220)
T 4hur_A 118 GDIEIGNDVWIGRDVTIM------PGVKIGDGAIIAAE 149 (220)
T ss_dssp CCEEECSSCEECTTCEEC------TTCEECTTCEECTT
T ss_pred CCeEECCCcEECCCCEEe------CCCEECCCCEEcCC
Confidence 345555555555555555 23344444444444
No 142
>1krr_A Galactoside O-acetyltransferase; LEFT-handed parallel beta helix; HET: ACO; 2.50A {Escherichia coli} SCOP: b.81.1.3 PDB: 1kqa_A* 1kru_A* 1krv_A*
Probab=98.93 E-value=4.3e-09 Score=93.04 Aligned_cols=12 Identities=17% Similarity=0.266 Sum_probs=4.8
Q ss_pred eeecCCeEEccC
Q 044626 402 DREANGYIISEG 413 (429)
Q Consensus 402 ~~~~~~~~i~~~ 413 (429)
.++|++++|++|
T Consensus 150 v~IG~~~vIgag 161 (203)
T 1krr_A 150 VTIGDNSVIGAG 161 (203)
T ss_dssp CEECTTCEECTT
T ss_pred eEECCCCEECCC
Confidence 333344444444
No 143
>2p2o_A Maltose transacetylase; GK1921, GKA001001921.1, geobacillus kaustophilus structural genomics, PSI; 1.74A {Geobacillus kaustophilus} PDB: 2ic7_A
Probab=98.91 E-value=9.3e-09 Score=89.75 Aligned_cols=49 Identities=22% Similarity=0.118 Sum_probs=33.8
Q ss_pred cCCccCCCeEE-eeeEeeCeEECCCcEEcc-eEe---eCcEEcCCcEECCCCEEecC
Q 044626 288 TMPRCLPPTMI-REAVIRDSVVGDGCIINR-CKI---KGTVIGMRTRIGDGAVIEDS 339 (429)
Q Consensus 288 ~~~~i~~~~~i-~~~~i~~~~ig~~~~i~~-~~v---~~~~ig~~~~ig~~~~i~~~ 339 (429)
.++.|.++... .+ .++.||++++|+. +.+ .+++||++|.|+++|.|...
T Consensus 59 ~~~~I~~p~~~~~g---~~v~IG~~~~i~~~~~i~~~~~i~IG~~v~Ig~~v~I~~~ 112 (185)
T 2p2o_A 59 ERLFIEPNFRCDYG---YNIHVGENFFMNFDGVILDVCEVRIGDHCFIGPGVHIYTA 112 (185)
T ss_dssp SCEEECSCEEESCS---TTEEECTTEEECSSEEEECSSCEEECTTCEECTTCEEECE
T ss_pred CCcEEeccEEEEec---CCEEECCeeEEcCCeEEEeccceEECCCcEEeCCCEEEcC
Confidence 34445555433 11 4678888888887 666 36889999999999988653
No 144
>1ocx_A Maltose O-acetyltransferase; LEFT-handed parallel beta-helix; 2.15A {Escherichia coli} SCOP: b.81.1.3
Probab=98.91 E-value=1.2e-08 Score=88.80 Aligned_cols=47 Identities=17% Similarity=0.163 Sum_probs=33.1
Q ss_pred CCccCCCeEE-eeeEeeCeEECCCcEEcc-eEee---CcEEcCCcEECCCCEEec
Q 044626 289 MPRCLPPTMI-REAVIRDSVVGDGCIINR-CKIK---GTVIGMRTRIGDGAVIED 338 (429)
Q Consensus 289 ~~~i~~~~~i-~~~~i~~~~ig~~~~i~~-~~v~---~~~ig~~~~ig~~~~i~~ 338 (429)
++.|+|++.. .+ .++.||++|+|++ +.+. .++||++|.|+++|.|..
T Consensus 58 ~~~I~~~~~~~~g---~~v~IG~~~~I~~~~~i~~~~~i~IG~~v~Ig~~v~I~~ 109 (182)
T 1ocx_A 58 EAYIEPTFRCDYG---YNIFLGNNFFANFDCVMLDVCPIRIGDNCMLAPGVHIYT 109 (182)
T ss_dssp SEEECSCEEESSS---TTEEECSSEEECSSEEEECSSCEEECTTCEECTTCEEEC
T ss_pred CEEEeCCEEEEeC---CCEEECCCcEEeCCeEEEeccceEEcCCcEEeCCcEEEe
Confidence 4456666543 11 4678888888887 6663 578888888888888864
No 145
>3mc4_A WW/RSP5/WWP domain:bacterial transferase hexapept repeat:serine O-acetyltransferase...; ssgcid, structural genomics; 1.95A {Brucella melitensis biovar abortus}
Probab=98.91 E-value=1.5e-09 Score=100.40 Aligned_cols=27 Identities=19% Similarity=0.385 Sum_probs=12.6
Q ss_pred eEeCCCCee-cceEEecCcEECCCcEEe
Q 044626 367 VGIGEDTQI-KKAVIDKNARIGKNVLII 393 (429)
Q Consensus 367 ~~ig~~~~i-~~~~ig~~~~ig~~~~i~ 393 (429)
|.||.++.| .++.||++|+||++++|.
T Consensus 223 v~IGaga~Il~gv~IG~~a~IGagsvV~ 250 (287)
T 3mc4_A 223 VLIGAGAKILGNIQVGQCSKIAAGSVVL 250 (287)
T ss_dssp CEECTTCEEESSCEECTTCEECTTCEEC
T ss_pred CEECCCCEECCCcEECCCCEECCCCEEc
Confidence 444444444 344444555555544443
No 146
>3f1x_A Serine acetyltransferase; NESG X-RAY BVR62 A6KZB9 A6KZB9_BACV8, structural genomics, P protein structure initiative; 2.00A {Bacteroides vulgatus atcc 8482}
Probab=98.91 E-value=1.6e-09 Score=101.53 Aligned_cols=31 Identities=10% Similarity=0.207 Sum_probs=15.9
Q ss_pred ceEEecCcEECCCcEEecCCCCCCCeeecCCeEEccC
Q 044626 377 KAVIDKNARIGKNVLIINKDGVQEGDREANGYIISEG 413 (429)
Q Consensus 377 ~~~ig~~~~ig~~~~i~~~~~~~~~~~~~~~~~i~~~ 413 (429)
+++||++|.||++|+|. ++.+||++++||+|
T Consensus 251 ~~~IGd~V~IGaga~Il------~gv~IGd~a~IGag 281 (310)
T 3f1x_A 251 HPILEDDVIVYSNATIL------GRVTIGKGATVGGN 281 (310)
T ss_dssp SCEECTTCEECTTCEEE------SSCEECTTCEECSS
T ss_pred CCEECCCcEEcCCCEEC------CCcEECCCCEECCC
Confidence 34555555555555555 33444444444444
No 147
>3q1x_A Serine acetyltransferase; cysteine biosynthesis, LEFT handed helix, OASS; 1.59A {Entamoeba histolytica} PDB: 3p47_A 3p1b_A
Probab=98.88 E-value=3.9e-09 Score=99.10 Aligned_cols=27 Identities=30% Similarity=0.530 Sum_probs=16.6
Q ss_pred eEeCCCCee-cceEEecCcEECCCcEEe
Q 044626 367 VGIGEDTQI-KKAVIDKNARIGKNVLII 393 (429)
Q Consensus 367 ~~ig~~~~i-~~~~ig~~~~ig~~~~i~ 393 (429)
|.||.++.| .++.||++|.||++++|.
T Consensus 230 v~IGaga~Ilggv~IG~~a~IGagsvV~ 257 (313)
T 3q1x_A 230 VTIGTGAKVLGNIIVGSHVRIGANCWID 257 (313)
T ss_dssp CEECTTCEEESSCEECSSEEECTTCEEC
T ss_pred CEECCCCEECCCcEECCCCEECCCCEEC
Confidence 556666655 456666666666666664
No 148
>4hur_A Virginiamycin A acetyltransferase; structural genomics, antibiotic resistance, center for struc genomics of infectious diseases (csgid); HET: ACO; 2.15A {Staphylococcus aureus} PDB: 4hus_A* 4e8l_A
Probab=98.87 E-value=1.1e-09 Score=98.63 Aligned_cols=27 Identities=30% Similarity=0.548 Sum_probs=14.7
Q ss_pred eEeCCCCee-cceEEecCcEECCCcEEe
Q 044626 367 VGIGEDTQI-KKAVIDKNARIGKNVLII 393 (429)
Q Consensus 367 ~~ig~~~~i-~~~~ig~~~~ig~~~~i~ 393 (429)
+.||++|.| .+|+|..+++||++|+|+
T Consensus 120 v~IG~~v~IG~~a~I~~gv~IG~gavIg 147 (220)
T 4hur_A 120 IEIGNDVWIGRDVTIMPGVKIGDGAIIA 147 (220)
T ss_dssp EEECSSCEECTTCEECTTCEECTTCEEC
T ss_pred eEECCCcEECCCCEEeCCCEECCCCEEc
Confidence 555555555 455555555555555554
No 149
>3f1x_A Serine acetyltransferase; NESG X-RAY BVR62 A6KZB9 A6KZB9_BACV8, structural genomics, P protein structure initiative; 2.00A {Bacteroides vulgatus atcc 8482}
Probab=98.87 E-value=6.2e-09 Score=97.50 Aligned_cols=27 Identities=26% Similarity=0.420 Sum_probs=13.9
Q ss_pred eEeCCCCee-cceEEecCcEECCCcEEe
Q 044626 367 VGIGEDTQI-KKAVIDKNARIGKNVLII 393 (429)
Q Consensus 367 ~~ig~~~~i-~~~~ig~~~~ig~~~~i~ 393 (429)
|.||.++.| .++.||++|+||+|++|.
T Consensus 258 V~IGaga~Il~gv~IGd~a~IGagsvV~ 285 (310)
T 3f1x_A 258 VIVYSNATILGRVTIGKGATVGGNIWVT 285 (310)
T ss_dssp CEECTTCEEESSCEECTTCEECSSCEEC
T ss_pred cEEcCCCEECCCcEECCCCEECCCCEEC
Confidence 445555554 355555555555555553
No 150
>1yp2_A Glucose-1-phosphate adenylyltransferase small subunit; ADP-glucose synthase, ADP-glucose pyrophosphorylase, agpase B; HET: PMB; 2.11A {Solanum tuberosum} SCOP: b.81.1.4 c.68.1.6 PDB: 1yp3_A* 1yp4_A*
Probab=98.84 E-value=3.7e-09 Score=105.76 Aligned_cols=99 Identities=21% Similarity=0.231 Sum_probs=72.3
Q ss_pred cCCccCCCeEEeeeEeeCeEECCCcEEcc-eEeeCcEEcCC-------------------cEECCCCEEecCeEECCccc
Q 044626 288 TMPRCLPPTMIREAVIRDSVVGDGCIINR-CKIKGTVIGMR-------------------TRIGDGAVIEDSVIMGADFY 347 (429)
Q Consensus 288 ~~~~i~~~~~i~~~~i~~~~ig~~~~i~~-~~v~~~~ig~~-------------------~~ig~~~~i~~~~~~~~~~~ 347 (429)
.++.|++++.|.++.+.++.||++|.|++ +.|.++++..+ +.||++|.|+++++.++
T Consensus 329 ~~~~Ig~~~~I~~~~i~~~~Ig~~~~Ig~~~~I~~~~~~~~~~~~~~~~~~~~~~~g~~~~~Ig~~~~i~~~~Ig~~--- 405 (451)
T 1yp2_A 329 TDSVIGEGCVIKNCKIHHSVVGLRSCISEGAIIEDSLLMGADYYETDADRKLLAAKGSVPIGIGKNCHIKRAIIDKN--- 405 (451)
T ss_dssp EEEEECTTCEEEEEEEESCEECTTCEECTTCEEESCEECCCSSCCCHHHHHHHHTTTCCCSEECTTCEEESEEECTT---
T ss_pred eCeEECCCCEEcceEEeccEECCCCEECCCCEEcCceEECCCCcccccccccccccCceeEEECCCCEEeccEeCCC---
Confidence 34677888888557788999999999999 99988777666 99999999987655554
Q ss_pred ccccccccCCccccCCcceeEeCCCCeecc-eEEecCcEECCCcEEecCCCCCCCeeecCCeEEccC
Q 044626 348 QQGEDIQSSGKCINHKAIPVGIGEDTQIKK-AVIDKNARIGKNVLIINKDGVQEGDREANGYIISEG 413 (429)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~~ig~~~~i~~-~~ig~~~~ig~~~~i~~~~~~~~~~~~~~~~~i~~~ 413 (429)
|.||+++.|.+ +.++.+++||+++.|+.+. .++|++++|++|
T Consensus 406 -------------------~~IG~~~~i~~~~~~~~~~~ig~~~~ig~~~-----v~Ig~~a~i~ag 448 (451)
T 1yp2_A 406 -------------------ARIGDNVKIINKDNVQEAARETDGYFIKSGI-----VTVIKDALIPSG 448 (451)
T ss_dssp -------------------CEECTTCEECCSSCCSCEEEGGGTEEEETTE-----EEECTTCEECTT
T ss_pred -------------------cEECCCCEEeCCcccccCceeCCCEEEcCCE-----EEECCCcEECCC
Confidence 88999998854 4444444666666665321 345677777766
No 151
>1ssq_A SAT, serine acetyltransferase; LEFT-handed parallel beta helix; 1.85A {Haemophilus influenzae} SCOP: b.81.1.6 PDB: 1sst_A* 1s80_A 1ssm_A 3gvd_A*
Probab=98.81 E-value=1.3e-08 Score=93.44 Aligned_cols=34 Identities=15% Similarity=0.080 Sum_probs=27.0
Q ss_pred HHHHhhcCCCCeEE--EEcCceeEeccHHHHHHHHHhcC
Q 044626 106 CLWVLEEYPVTEFL--ILPGHHLYKMDYQRLIEAHRNNK 142 (429)
Q Consensus 106 ~~~~i~~~~~~~~l--vl~gD~i~~~~l~~~~~~~~~~~ 142 (429)
|+..++. +++| ++++|++...+|.+++.+|...+
T Consensus 13 a~~~~~~---EP~L~~~l~~~IL~~~~l~~aLa~~la~k 48 (267)
T 1ssq_A 13 AKELAEN---EPMLASFFHSTILKHQNLGGALSYLLANK 48 (267)
T ss_dssp HHHHHHH---CHHHHHHHHHHTTTSSSHHHHHHHHHHHH
T ss_pred HHHHHhc---CCHHHHHhcccccCCCCHHHHHHHHHhcc
Confidence 4444543 8999 99999999999999999887754
No 152
>1t3d_A SAT, serine acetyltransferase; LEFT-handed-beta-helix, dimer of trimers; 2.20A {Escherichia coli} SCOP: b.81.1.6
Probab=98.80 E-value=1.3e-08 Score=94.17 Aligned_cols=27 Identities=15% Similarity=0.095 Sum_probs=24.1
Q ss_pred CeEE--EEcCceeEeccHHHHHHHHHhcC
Q 044626 116 TEFL--ILPGHHLYKMDYQRLIEAHRNNK 142 (429)
Q Consensus 116 ~~~l--vl~gD~i~~~~l~~~~~~~~~~~ 142 (429)
+++| ++++|++...+|.+++.+|...+
T Consensus 40 EP~L~~~l~~~IL~~~~l~~aLa~~La~k 68 (289)
T 1t3d_A 40 EPMLASFYHATLLKHENLGSALSYMLANK 68 (289)
T ss_dssp CGGGHHHHHHHTTTCSSHHHHHHHHHHHH
T ss_pred CCHHHHHhcccccCCCCHHHHHHHHHhcc
Confidence 8999 99999999999999999987754
No 153
>1ssq_A SAT, serine acetyltransferase; LEFT-handed parallel beta helix; 1.85A {Haemophilus influenzae} SCOP: b.81.1.6 PDB: 1sst_A* 1s80_A 1ssm_A 3gvd_A*
Probab=98.80 E-value=7.2e-09 Score=95.14 Aligned_cols=27 Identities=33% Similarity=0.550 Sum_probs=12.9
Q ss_pred eEeCCCCee-cceEEecCcEECCCcEEe
Q 044626 367 VGIGEDTQI-KKAVIDKNARIGKNVLII 393 (429)
Q Consensus 367 ~~ig~~~~i-~~~~ig~~~~ig~~~~i~ 393 (429)
|.||.++.| .+++||++|+||+++++.
T Consensus 196 v~IGaga~Il~gv~IG~~a~IGagsvV~ 223 (267)
T 1ssq_A 196 VMIGAGAKILGNIEVGKYAKIGANSVVL 223 (267)
T ss_dssp CEECTTCEEESSCEECTTCEECTTCEEC
T ss_pred eEEcCCCEEeCCcEECCCCEECCCCEEc
Confidence 444444444 344455555555555443
No 154
>2p2o_A Maltose transacetylase; GK1921, GKA001001921.1, geobacillus kaustophilus structural genomics, PSI; 1.74A {Geobacillus kaustophilus} PDB: 2ic7_A
Probab=98.80 E-value=1.7e-08 Score=88.07 Aligned_cols=10 Identities=20% Similarity=0.441 Sum_probs=3.8
Q ss_pred ecCCeEEccC
Q 044626 404 EANGYIISEG 413 (429)
Q Consensus 404 ~~~~~~i~~~ 413 (429)
+|++++|++|
T Consensus 151 IG~~~vIgag 160 (185)
T 2p2o_A 151 IGDNAVIASG 160 (185)
T ss_dssp ECTTCEECTT
T ss_pred ECCCCEECCC
Confidence 3333333333
No 155
>1ocx_A Maltose O-acetyltransferase; LEFT-handed parallel beta-helix; 2.15A {Escherichia coli} SCOP: b.81.1.3
Probab=98.79 E-value=1.2e-08 Score=88.71 Aligned_cols=9 Identities=11% Similarity=0.597 Sum_probs=3.4
Q ss_pred cCCeEEccC
Q 044626 405 ANGYIISEG 413 (429)
Q Consensus 405 ~~~~~i~~~ 413 (429)
|++++|++|
T Consensus 150 G~~~vIgag 158 (182)
T 1ocx_A 150 GDNVVVASG 158 (182)
T ss_dssp CTTCEECTT
T ss_pred CCCCEECCC
Confidence 333333333
No 156
>3mc4_A WW/RSP5/WWP domain:bacterial transferase hexapept repeat:serine O-acetyltransferase...; ssgcid, structural genomics; 1.95A {Brucella melitensis biovar abortus}
Probab=98.78 E-value=1.5e-08 Score=93.62 Aligned_cols=36 Identities=25% Similarity=0.506 Sum_probs=21.6
Q ss_pred CeEECCCcEEc--ceEeeCcEEcCCcEECCCCEEecCeEECC
Q 044626 305 DSVVGDGCIIN--RCKIKGTVIGMRTRIGDGAVIEDSVIMGA 344 (429)
Q Consensus 305 ~~~ig~~~~i~--~~~v~~~~ig~~~~ig~~~~i~~~~~~~~ 344 (429)
++.||++|.|+ . +++||++|+||++|.|..++.+++
T Consensus 170 ~a~IG~~v~I~hg~----gvvIG~~~~IGd~v~I~~gvtIg~ 207 (287)
T 3mc4_A 170 AARLGSGLFLDHAT----GLVVGETAVVEDNVSILHGVTLGG 207 (287)
T ss_dssp TCEECSSCEEESCT----TCEECTTCEECSSCEEETTCEEEC
T ss_pred CCEECCCeEEccCC----CeEECCCeEECCCCEEcCCCEEcC
Confidence 34556666665 3 566666666666666666555544
No 157
>1t3d_A SAT, serine acetyltransferase; LEFT-handed-beta-helix, dimer of trimers; 2.20A {Escherichia coli} SCOP: b.81.1.6
Probab=98.73 E-value=1.5e-08 Score=93.85 Aligned_cols=13 Identities=8% Similarity=0.094 Sum_probs=6.7
Q ss_pred HHHHHHHhHhhhc
Q 044626 259 IEAFYHANMECIK 271 (429)
Q Consensus 259 ~~~~~~an~~~l~ 271 (429)
+..|+.++..+.+
T Consensus 127 l~~yR~ah~l~~~ 139 (289)
T 1t3d_A 127 LQAYRIGHWLWNQ 139 (289)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHc
Confidence 4555555554443
No 158
>3brk_X Glucose-1-phosphate adenylyltransferase; ADP-glucose pyrophosphorylase, allostery, kinetics, structure-function relationships; 2.10A {Agrobacterium tumefaciens}
Probab=98.65 E-value=5.3e-08 Score=96.36 Aligned_cols=72 Identities=19% Similarity=0.337 Sum_probs=57.0
Q ss_pred eEeeCcEEcCCcEECCCCEEecCeEECCcccccccccccCCccccCCcceeEeCCCCeecceEEecCcEECCCcEEecCC
Q 044626 317 CKIKGTVIGMRTRIGDGAVIEDSVIMGADFYQQGEDIQSSGKCINHKAIPVGIGEDTQIKKAVIDKNARIGKNVLIINKD 396 (429)
Q Consensus 317 ~~v~~~~ig~~~~ig~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~~~i~~~~ig~~~~ig~~~~i~~~~ 396 (429)
+.++++.||++|.| +++.|.++++..+ |.||++|.|.+|+||++|.||++|.|.
T Consensus 320 ~~i~~~~ig~~~~I-~~~~i~~~~ig~~----------------------~~I~~~~~i~~~~i~~~~~i~~~~~i~--- 373 (420)
T 3brk_X 320 GSAVSSVVSGDCII-SGAALNRSLLFTG----------------------VRANSYSRLENAVVLPSVKIGRHAQLS--- 373 (420)
T ss_dssp CEEESCEECSSCEE-ESCEEESCEECTT----------------------CEECTTCEEEEEEECTTCEECTTCEEE---
T ss_pred cEecCCEECCCCEE-cCCEEeCcEEcCC----------------------CEECCCCEEcceEEcCCCEECCCCEEe---
Confidence 45568999999999 8999988666655 899999999999999999999999996
Q ss_pred CCCCCeeecCCeEEccCEEEEcC
Q 044626 397 GVQEGDREANGYIISEGIVVIIH 419 (429)
Q Consensus 397 ~~~~~~~~~~~~~i~~~~~~i~~ 419 (429)
++.+|++++|++| ++|+.
T Consensus 374 ----~~~ig~~~~i~~~-~~i~~ 391 (420)
T 3brk_X 374 ----NVVIDHGVVIPEG-LIVGE 391 (420)
T ss_dssp ----EEEECTTCEECTT-CEESS
T ss_pred ----ceEECCCCEECCC-CEEeC
Confidence 2455566666666 34443
No 159
>2rij_A Putative 2,3,4,5-tetrahydropyridine-2-carboxylate succinyltransferase; structural genomics, joint center for structural genomics; HET: MSE CIT; 1.90A {Campylobacter jejuni}
Probab=98.61 E-value=9.7e-08 Score=91.47 Aligned_cols=14 Identities=14% Similarity=0.114 Sum_probs=8.3
Q ss_pred cCcHHHHHHHHHHh
Q 044626 97 QGNADAIRRCLWVL 110 (429)
Q Consensus 97 ~Gt~~al~~~~~~i 110 (429)
.|++..+..++...
T Consensus 57 ~~~~~~~~~~~~~~ 70 (387)
T 2rij_A 57 FGSAAIMLEAFMQR 70 (387)
T ss_dssp HHHHHHHHHHHHHT
T ss_pred cchHHHHHHHHHhh
Confidence 46666666666443
No 160
>3r3i_A UTP--glucose-1-phosphate uridylyltransferase; rossmann fold, beta barrel, nucleotidyltransferase; 3.57A {Homo sapiens} PDB: 3r2w_A
Probab=98.59 E-value=6.9e-06 Score=81.39 Aligned_cols=242 Identities=12% Similarity=0.081 Sum_probs=135.9
Q ss_pred CeEEEEEcCCCCCCcccccccccccccccC-CcchhHHHHHHhhHhc----CC-CeEEEEeecC-hhHHHHHHhccccCc
Q 044626 1 SVAAVVFGDGSESRLYPLTKRRSEGAIPLA-ANYRLVDAVVSNCINS----NI-NKIYALTQFN-STSLNLHLSRAFSGI 73 (429)
Q Consensus 1 ~m~avIla~G~gsRl~plt~~~pK~Llpi~-g~~plI~~~i~~l~~~----gi-~~I~Iv~~~~-~~~i~~~l~~~~~~~ 73 (429)
|+-+|+||||.||||+ ...||.++|+. |+ ++++..++.+... |. =-.+|-++.. .+...+++.+... +
T Consensus 127 kvavvlLaGGlGTRLG---~~~PK~~i~V~sgk-tflql~~eqI~~l~~~~g~~IPl~IMTS~~T~~~T~~~f~k~~~-f 201 (528)
T 3r3i_A 127 KLVVVKLNGGLGTSMG---CKGPKSLIGVRNEN-TFLDLTVQQIEHLNKTYNTDVPLVLMNSFNTDEDTKKILQKYNH-C 201 (528)
T ss_dssp TEEEEEECCCBCTTTT---CSSBGGGSEEETTE-EHHHHHHHHHHHHHHHHTCCCCEEEEECTTTHHHHHSSCGGGTT-S
T ss_pred ceEEEEeCCCCccccC---CCCCccceecCCCC-cHHHHHHHHHHHHHHHhCCCCCEEEEeccchhHHHHHHHHhcCc-c
Confidence 4678999999999997 67899999997 88 9999999998764 42 1345555554 6778888876432 3
Q ss_pred ccCCCCcEEEEeccccc---------------------cccC-cccCcHHHHHHH-----HHHhhcCCCCeEEEEcCcee
Q 044626 74 LRGKDGFVEVIAAYQSL---------------------EDQD-WFQGNADAIRRC-----LWVLEEYPVTEFLILPGHHL 126 (429)
Q Consensus 74 ~~~~~~~v~i~~~~~~~---------------------~~~~-~~~Gt~~al~~~-----~~~i~~~~~~~~lvl~gD~i 126 (429)
+.+ +....|.. .... .|-|.++..... ++.+....-+.+.+.+.|++
T Consensus 202 g~~------V~~F~Q~~~P~i~~dg~l~l~~~~~~~~~~~~~~~P~GhGdiy~aL~~sGlLd~l~~~Gieyi~v~nvDNl 275 (528)
T 3r3i_A 202 RVK------IYTFNQSRYPRINKESLLPVAKDVSYSGENTEAWYPPGHGDIYASFYNSGLLDTFIGEGKEYIFVSNIDNL 275 (528)
T ss_dssp SCC------EEEEECCCBCCEETTTCCCC-------------CBCCBTTTHHHHHHHHSHHHHHHHTTCCEEEEEETTBT
T ss_pred CCC------eEEEEeCCeeeEecCCceecccccccCCCcceeeCcCCChHHHHHHHHCChHHHHHhcCCEEEEEEccCCc
Confidence 321 12222210 0001 246775544332 23343344589999999996
Q ss_pred E-eccHHHHHHHHHhc----CCceEEEEEeccCCCCCC-ccEEEEcCCCC--EEEEEecCcccccccccCCCCCCCCCCC
Q 044626 127 Y-KMDYQRLIEAHRNN----KADITIVALNAIRDKHPG-FGLLRVNPVNQ--VIEFSMKSERETITSISGKSSRKSDSVA 198 (429)
Q Consensus 127 ~-~~~l~~~~~~~~~~----~~~~ti~~~~~~~~~~~~-~g~v~~d~~~~--v~~~~ek~~~~~~~~~~~~~~~~~~~~~ 198 (429)
. ..|. .++.++..+ ++++.+=+.+ ...+.. -|++.. .+|+ +.++.+-+.... +. .....
T Consensus 276 ga~vDp-~~Lg~~~~~~~~~~~d~~~kVv~--Kt~~dek~Gvl~~-~dGk~~vvEyseip~e~~------~~---~~g~~ 342 (528)
T 3r3i_A 276 GATVDL-YILNHLMNPPNGKRCEFVMEVTN--KTRADVKGGTLTQ-YEGKLRLVEIAQVPKAHV------DE---FKSVS 342 (528)
T ss_dssp TCCCCH-HHHHHHSSCSSSCCCSEEEEECC--CCTTCCSSCEEEC-SSSSCEEECTTSSCGGGT------TT---SSCSS
T ss_pred ccccCH-HHHHHHHhcccccCCcEEEEEeE--ccccCCcccEEEE-ECCeEEEEEecCCChhHh------hc---cCCcc
Confidence 5 4444 356666665 6676553332 222322 254433 3453 444444332211 00 01011
Q ss_pred CCCcceeeEEEEcHHHHHHHHHhhCCCC------------------cccccccchhcccCCceEEEEEe-cceEEecCCH
Q 044626 199 SGNFPSMGIYLINRDTMSRLLKEYLPEA------------------TDLGSEVIPAAISIGMKVEAYLF-DGYWEDMRSI 259 (429)
Q Consensus 199 ~~~~~~~Giy~~~~~~l~~~l~~~~~~~------------------~~~~~d~l~~l~~~g~~i~~~~~-~~~~~~i~t~ 259 (429)
.-.+.++...+|+-++++++++...... +.+..++++..- +..++.+ ...+..+.+.
T Consensus 343 ~f~~~Ntnnlw~~L~~L~~v~~~~~l~Lp~ivn~K~vd~~~~viqlEt~igd~i~~f~----~~~~i~VpR~rF~PvKn~ 418 (528)
T 3r3i_A 343 KFKIFNTNNLWISLAAVKRLQEQNAIDMEIIVNAKTLDGGLNVIQLETAVGAAIKSFE----NSLGINVPRSRFLPVKTT 418 (528)
T ss_dssp SCCCCEEEEEEEEHHHHHHHHHTTCCCCCCEEEEECCSSSSCEEEEEBCSTTCSTTSS----SCCCEECCGGGCCBCCSH
T ss_pred cCCeEEEEEEEEEHHHHHHHHHhCCCCCCceecCcccCCCCCEEEeHHHHHHHHHhcc----CcEEEEEehHHcccccch
Confidence 2345689999999999998888641100 112223333321 1222333 2348889999
Q ss_pred HHHHHHhHhhh
Q 044626 260 EAFYHANMECI 270 (429)
Q Consensus 260 ~~~~~an~~~l 270 (429)
.|++....++.
T Consensus 419 sdLll~~Sdly 429 (528)
T 3r3i_A 419 SDLLLVMSNLY 429 (528)
T ss_dssp HHHHHHHSTTS
T ss_pred HHHHHHhccee
Confidence 99986654443
No 161
>3eev_A Chloramphenicol acetyltransferase; beta-helix, structural genomics, center for STR genomics of infectious diseases, csgid; 2.61A {Vibrio cholerae o1 biovar el tor} SCOP: b.81.1.3
Probab=98.54 E-value=1e-07 Score=85.13 Aligned_cols=32 Identities=25% Similarity=0.492 Sum_probs=17.8
Q ss_pred cceEEecCcEECCCcEEecCCCCCCCeeecCCeEEccC
Q 044626 376 KKAVIDKNARIGKNVLIINKDGVQEGDREANGYIISEG 413 (429)
Q Consensus 376 ~~~~ig~~~~ig~~~~i~~~~~~~~~~~~~~~~~i~~~ 413 (429)
..++||++|.||.+|+|. .+.++|++|+|+++
T Consensus 110 g~v~IG~~v~IG~~a~I~------~gv~IG~~~iIgag 141 (212)
T 3eev_A 110 GDTIIGHDVWIGTEAMIM------PGVKIGHGAIIASR 141 (212)
T ss_dssp CCEEECSSCEECTTCEEC------TTCEECTTCEECTT
T ss_pred CCeEECCCCEECCCCEEc------CCCEECCCCEECCC
Confidence 345566666666666555 44455555555555
No 162
>3eev_A Chloramphenicol acetyltransferase; beta-helix, structural genomics, center for STR genomics of infectious diseases, csgid; 2.61A {Vibrio cholerae o1 biovar el tor} SCOP: b.81.1.3
Probab=98.54 E-value=9e-08 Score=85.48 Aligned_cols=29 Identities=31% Similarity=0.492 Sum_probs=19.5
Q ss_pred eEeCCCCee-cceEEecCcEECCCcEEecC
Q 044626 367 VGIGEDTQI-KKAVIDKNARIGKNVLIINK 395 (429)
Q Consensus 367 ~~ig~~~~i-~~~~ig~~~~ig~~~~i~~~ 395 (429)
+.||++|.| .+|+|..+++||++|+|+.+
T Consensus 112 v~IG~~v~IG~~a~I~~gv~IG~~~iIgag 141 (212)
T 3eev_A 112 TIIGHDVWIGTEAMIMPGVKIGHGAIIASR 141 (212)
T ss_dssp EEECSSCEECTTCEECTTCEECTTCEECTT
T ss_pred eEECCCCEECCCCEEcCCCEECCCCEECCC
Confidence 677777777 56666666666666666633
No 163
>4e8l_A Virginiamycin A acetyltransferase; structural genomics, antibiotic resistance, center for struc genomics of infectious diseases (csgid); 2.70A {Staphylococcus aureus}
Probab=98.47 E-value=1.3e-07 Score=84.57 Aligned_cols=32 Identities=28% Similarity=0.470 Sum_probs=19.8
Q ss_pred cceEEecCcEECCCcEEecCCCCCCCeeecCCeEEccC
Q 044626 376 KKAVIDKNARIGKNVLIINKDGVQEGDREANGYIISEG 413 (429)
Q Consensus 376 ~~~~ig~~~~ig~~~~i~~~~~~~~~~~~~~~~~i~~~ 413 (429)
.+++||++|.||.+++|. .+.++|++++|+++
T Consensus 117 g~v~Igd~v~IG~~a~I~------~gv~IG~~~~Igag 148 (219)
T 4e8l_A 117 GDIEIGNDVWIGRDVTIM------PGVKIGDGAIIAAE 148 (219)
T ss_dssp CCEEECSSCEECTTCEEC------TTCEECTTCEECTT
T ss_pred CCcEECCCeEECCCCEEc------CCCEECCCCEECCC
Confidence 456666666666666665 34555566666666
No 164
>4e8l_A Virginiamycin A acetyltransferase; structural genomics, antibiotic resistance, center for struc genomics of infectious diseases (csgid); 2.70A {Staphylococcus aureus}
Probab=98.47 E-value=1.9e-07 Score=83.48 Aligned_cols=28 Identities=29% Similarity=0.525 Sum_probs=17.1
Q ss_pred eEeCCCCee-cceEEecCcEECCCcEEec
Q 044626 367 VGIGEDTQI-KKAVIDKNARIGKNVLIIN 394 (429)
Q Consensus 367 ~~ig~~~~i-~~~~ig~~~~ig~~~~i~~ 394 (429)
+.||++|.| .+++|..+++||++|+|+.
T Consensus 119 v~Igd~v~IG~~a~I~~gv~IG~~~~Iga 147 (219)
T 4e8l_A 119 IEIGNDVWIGRDVTIMPGVKIGDGAIIAA 147 (219)
T ss_dssp EEECSSCEECTTCEECTTCEECTTCEECT
T ss_pred cEECCCeEECCCCEEcCCCEECCCCEECC
Confidence 566666666 5566666666666666653
No 165
>1mr7_A Streptogramin A acetyltransferase; LEFT-handed parallel beta-helix domain; 1.80A {Enterococcus faecium} SCOP: b.81.1.3 PDB: 1khr_A* 1kk5_A 1kk4_A 1kk6_A 1mr9_A* 1mrl_A* 3dho_A*
Probab=98.41 E-value=2.6e-07 Score=82.05 Aligned_cols=32 Identities=28% Similarity=0.577 Sum_probs=18.8
Q ss_pred cceEEecCcEECCCcEEecCCCCCCCeeecCCeEEccC
Q 044626 376 KKAVIDKNARIGKNVLIINKDGVQEGDREANGYIISEG 413 (429)
Q Consensus 376 ~~~~ig~~~~ig~~~~i~~~~~~~~~~~~~~~~~i~~~ 413 (429)
..++||++|.||.++.|. .+.++|++++|+++
T Consensus 112 ~~v~Ig~~v~IG~~a~I~------~gv~Ig~~~~Igag 143 (209)
T 1mr7_A 112 GDTIIGNDVWIGKDVVIM------PGVKIGDGAIVAAN 143 (209)
T ss_dssp CCEEECSSCEECTTCEEC------TTCEECTTCEECTT
T ss_pred CCcEECCCCEEcCCCEEc------CCCEECCCCEEcCC
Confidence 445566666666666665 34555566666666
No 166
>1mr7_A Streptogramin A acetyltransferase; LEFT-handed parallel beta-helix domain; 1.80A {Enterococcus faecium} SCOP: b.81.1.3 PDB: 1khr_A* 1kk5_A 1kk4_A 1kk6_A 1mr9_A* 1mrl_A* 3dho_A*
Probab=98.41 E-value=2.5e-07 Score=82.21 Aligned_cols=16 Identities=38% Similarity=0.455 Sum_probs=12.3
Q ss_pred CcEEcCCcEECCCCEE
Q 044626 321 GTVIGMRTRIGDGAVI 336 (429)
Q Consensus 321 ~~~ig~~~~ig~~~~i 336 (429)
+++||++|.|++++.|
T Consensus 60 ~v~IG~~~~Ig~gv~I 75 (209)
T 1mr7_A 60 KLKIGKFCSIGPGVTI 75 (209)
T ss_dssp CEEECSSCEECTTCEE
T ss_pred CEEECCCCEEcCCCEE
Confidence 5777888888888776
No 167
>1xat_A Xenobiotic acetyltransferase; chloramphenicol, LEFT-handed helix; 3.20A {Pseudomonas aeruginosa} SCOP: b.81.1.3 PDB: 2xat_A*
Probab=98.27 E-value=3.6e-06 Score=74.72 Aligned_cols=40 Identities=25% Similarity=0.379 Sum_probs=23.4
Q ss_pred EeCCCCee-cceEEecCcEECCCcEEecCCCCCCCeeecCCeEEccC
Q 044626 368 GIGEDTQI-KKAVIDKNARIGKNVLIINKDGVQEGDREANGYIISEG 413 (429)
Q Consensus 368 ~ig~~~~i-~~~~ig~~~~ig~~~~i~~~~~~~~~~~~~~~~~i~~~ 413 (429)
.+++++.+ ..++||++|.||.+|+|. .+.++|++++|+++
T Consensus 100 ~i~~~~~~~~~v~IG~~v~IG~~a~I~------~gv~Ig~~~~Igag 140 (212)
T 1xat_A 100 GAVNGYQPAGDTLIGHEVWIGTEAMFM------PGVRVGHGAIIGSR 140 (212)
T ss_dssp GCCCCCCCCCCEEECTTCEECTTCEEC------TTCEECTTCEECTT
T ss_pred ccccCceecCCeEECCCCEECCCCEEe------CCCEECCCCEECCC
Confidence 34555555 346677777777777666 34455555555555
No 168
>1xat_A Xenobiotic acetyltransferase; chloramphenicol, LEFT-handed helix; 3.20A {Pseudomonas aeruginosa} SCOP: b.81.1.3 PDB: 2xat_A*
Probab=98.24 E-value=7.6e-07 Score=79.11 Aligned_cols=30 Identities=23% Similarity=0.385 Sum_probs=20.0
Q ss_pred eeEeCCCCee-cceEEecCcEECCCcEEecC
Q 044626 366 PVGIGEDTQI-KKAVIDKNARIGKNVLIINK 395 (429)
Q Consensus 366 ~~~ig~~~~i-~~~~ig~~~~ig~~~~i~~~ 395 (429)
++.||++|.| .+++|..+++||++|+|+.+
T Consensus 110 ~v~IG~~v~IG~~a~I~~gv~Ig~~~~Igag 140 (212)
T 1xat_A 110 DTLIGHEVWIGTEAMFMPGVRVGHGAIIGSR 140 (212)
T ss_dssp CEEECTTCEECTTCEECTTCEECTTCEECTT
T ss_pred CeEECCCCEECCCCEEeCCCEECCCCEECCC
Confidence 3677777777 56666666666666666643
No 169
>3gue_A UTP-glucose-1-phosphate uridylyltransferase 2; phosphatase, UDP, structural GE structural genomics consortium, SGC; HET: UPG PG4; 1.92A {Trypanosoma brucei}
Probab=98.19 E-value=0.0019 Score=63.54 Aligned_cols=251 Identities=12% Similarity=0.077 Sum_probs=139.2
Q ss_pred CeEEEEEcCCCCCCccccccccccccccc-CCcchhHHHHHHhhHhc----CC-CeEEEEeecC-hhHHHHHHhccccCc
Q 044626 1 SVAAVVFGDGSESRLYPLTKRRSEGAIPL-AANYRLVDAVVSNCINS----NI-NKIYALTQFN-STSLNLHLSRAFSGI 73 (429)
Q Consensus 1 ~m~avIla~G~gsRl~plt~~~pK~Llpi-~g~~plI~~~i~~l~~~----gi-~~I~Iv~~~~-~~~i~~~l~~~~~~~ 73 (429)
|+-.|+||||.||||+ ...||.++|+ .|+ ++++..++.+... +. =-.+|-++.. .+...+++.+... +
T Consensus 76 kvavvlLaGGlGTRLG---~~~pKg~~~v~sgk-sflql~~eqI~~l~~~~~~~iPl~IMTS~~T~~~T~~~~~k~~~-F 150 (484)
T 3gue_A 76 QAVVLKLNGGLGTGMG---LNGPKSLLQVKNGQ-TFLDFTALQLEHFRQVRNCNVPFMLMNSFSTSGETKNFLRKYPT-L 150 (484)
T ss_dssp TEEEEEEECCCCGGGT---CSSCGGGSEEETTE-EHHHHHHHHHHHHHHHHTCCCCEEEEECTTTHHHHHHHGGGCHH-H
T ss_pred hcEEEEEcCCcccccC---CCCCceeeecCCCC-cHHHHHHHHHHHHHHHcCCCceEEEECCcchhHHHHHHHHhCcc-c
Confidence 4568899999999997 6789999999 677 9999999998653 32 2346666654 6778889887422 3
Q ss_pred ccCC-------CCcEEEEeccc-------cccccCc-ccCcHHHHHHH-----HHHhhcCCCCeEEEEcCceeEeccHHH
Q 044626 74 LRGK-------DGFVEVIAAYQ-------SLEDQDW-FQGNADAIRRC-----LWVLEEYPVTEFLILPGHHLYKMDYQR 133 (429)
Q Consensus 74 ~~~~-------~~~v~i~~~~~-------~~~~~~~-~~Gt~~al~~~-----~~~i~~~~~~~~lvl~gD~i~~~~l~~ 133 (429)
++.. +..+--+..+. ......| |-|.++..... ++.+....-+.+.+.+.|++....--.
T Consensus 151 gl~~~~v~~F~Q~~~P~i~~dg~~~i~~~~~~~i~~~P~GhGdiy~aL~~sGiLd~l~~~Gieyi~v~~vDNL~a~~Dp~ 230 (484)
T 3gue_A 151 YEVFDSDIELMQNRVPKIRQDNFFPVTYEADPTCEWVPPGHGDVYTVLYSSGKLDYLLGKGYRYMFISNGDNLGATLDVR 230 (484)
T ss_dssp HTTCCCCCEEECCCEECEETTTCCBCCCTTCGGGGEECCCGGGHHHHHHHHSHHHHHHHTTCCEEEEEETTCTTCCCCHH
T ss_pred CCCccceEEEEeCceeeEecCCCceeecCCCCceeeccCCchHHHHHHHhCCcHHHHHHcCCEEEEEEcCCCcccccCHH
Confidence 4321 11110000000 0000012 56776644432 233433345899999999955322245
Q ss_pred HHHHHHhcCCceEEEEEeccCCCCCCccEEEEc---------CCCCE--EEEEecCcccccccccCCCCCCCCCCCCCCc
Q 044626 134 LIEAHRNNKADITIVALNAIRDKHPGFGLLRVN---------PVNQV--IEFSMKSERETITSISGKSSRKSDSVASGNF 202 (429)
Q Consensus 134 ~~~~~~~~~~~~ti~~~~~~~~~~~~~g~v~~d---------~~~~v--~~~~ek~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (429)
++-++.++++++.+-+.+-...+ ..=|++... .+|+. .++.+-|..... .. .+. ....+
T Consensus 231 ~lG~~~~~~~d~~~kvv~Kt~~d-ekgG~l~~~~~~~~~~~~~dG~~~vvEyseip~e~~~-~f-~~~-------~g~~~ 300 (484)
T 3gue_A 231 LLDYMHEKQLGFLMEVCRRTESD-KKGGHLAYKDVIDETTGQTRRRFVLRESAQCPKEDED-SF-QNI-------AKHCF 300 (484)
T ss_dssp HHHHHHHTTCSEEEEEEECCTTC-CSSEEEEEEC--------CCCEEEEEEGGGSCGGGHH-HH-TCT-------TTSCE
T ss_pred HHHHHHhcCCCEEEEEEECCCCC-CceeEEEEEccccccccCCCCCEEEEEeccCCHHHHh-hh-cCC-------CCceE
Confidence 67888888888876554432211 222544321 24543 333333221100 00 000 12234
Q ss_pred ceeeEEEEcHHHHHHHHHhh--CCCC----------------------cccccccchhcccCCceEEEEEe-cceEEecC
Q 044626 203 PSMGIYLINRDTMSRLLKEY--LPEA----------------------TDLGSEVIPAAISIGMKVEAYLF-DGYWEDMR 257 (429)
Q Consensus 203 ~~~Giy~~~~~~l~~~l~~~--~~~~----------------------~~~~~d~l~~l~~~g~~i~~~~~-~~~~~~i~ 257 (429)
.+++-.+++-..++++++.. .... +.|..|+++.+ .+..++.+ ...+..+.
T Consensus 301 FNtnNi~~~l~~l~~~l~~~~g~~~Lp~~vn~K~id~~k~~~~~~iqlE~~~~d~~~~~----~~~~~ieV~R~rF~PvK 376 (484)
T 3gue_A 301 FNTNNIWINLMELKKMMDEQLGVLRLPVMRNPKTVNPQDSQSTKVYQLEVAMGAAISLF----DRSEAVVVPRERFAPVK 376 (484)
T ss_dssp EEEEEEEEEHHHHHHHHHHTTTCCCCCCEEEEEESSTTCTTSCEEEEEECCGGGGGTTS----SSEEEEECCGGGCCCCS
T ss_pred eEeeeEEEEHHHHHHHHHhccCcCCCCcEeccceecCCCCCCCCEeehHHHHHHHHHhC----CccEEEEEChhhccccc
Confidence 58899999998887788763 1000 11122333332 23444444 24678888
Q ss_pred CHHHHHHHhHhhh
Q 044626 258 SIEAFYHANMECI 270 (429)
Q Consensus 258 t~~~~~~an~~~l 270 (429)
+..|++....++.
T Consensus 377 n~sdLl~~~Sdly 389 (484)
T 3gue_A 377 TCSDLLALRSDAY 389 (484)
T ss_dssp SHHHHHHHHSTTE
T ss_pred cchHHHHHhhhce
Confidence 9998877755544
No 170
>3ogz_A UDP-sugar pyrophosphorylase; LEFT handed beta helix, rossmann fold, UDP sugar pyrophospho transferase; 2.03A {Leishmania major} PDB: 3oh3_A* 3oh1_A* 3oh0_A* 3oh2_A* 3oh4_A*
Probab=97.21 E-value=0.012 Score=59.63 Aligned_cols=208 Identities=9% Similarity=-0.001 Sum_probs=114.5
Q ss_pred CeEEEEEcCCCCCCcccccccccccccccC---CcchhHHHHHHhhHhc-CC-CeEEEEeecC-hhHHHHHHhccccCcc
Q 044626 1 SVAAVVFGDGSESRLYPLTKRRSEGAIPLA---ANYRLVDAVVSNCINS-NI-NKIYALTQFN-STSLNLHLSRAFSGIL 74 (429)
Q Consensus 1 ~m~avIla~G~gsRl~plt~~~pK~Llpi~---g~~plI~~~i~~l~~~-gi-~~I~Iv~~~~-~~~i~~~l~~~~~~~~ 74 (429)
|+-.|+||||.||||+ ...||.++|++ |+ +++++.++++.+. |. =-.+|-++.. .+...++|.+ | +
T Consensus 114 kvavvllaGGlGTRLG---~~~pK~~lpv~~~s~k-s~lql~~e~i~~~~g~~iPl~IMTS~~T~~~T~~~~~~-f---g 185 (630)
T 3ogz_A 114 KTVFVLVAGGLGERLG---YSSIKVSLPVETATNT-TYLAYYLRWAQRVGGKEVPFVIMTSDDTHDRTLQLLRE-L---Q 185 (630)
T ss_dssp GEEEEEECCCEEGGGT---EEEEGGGSBSCTTTCC-BHHHHHHHHHHHHHCTTCCEEEEECTTTHHHHHHHHHH-T---T
T ss_pred hceEEEecCCcccccC---CCCCcccceecCCCCC-cHHHHHHHHHHHHhCCCCcEEEEecccchHHHHHHHHH-h---C
Confidence 4568899999999998 67899999997 88 9999999998753 42 2245556554 6778888887 3 3
Q ss_pred cCCCCcEEEEeccccc----------------cccC-cccCcHHHHHHH-----------------------HHHhhcCC
Q 044626 75 RGKDGFVEVIAAYQSL----------------EDQD-WFQGNADAIRRC-----------------------LWVLEEYP 114 (429)
Q Consensus 75 ~~~~~~v~i~~~~~~~----------------~~~~-~~~Gt~~al~~~-----------------------~~~i~~~~ 114 (429)
++.. . +....|.. ..-. .|-|.++..... ++.+....
T Consensus 186 l~~~-~--V~~F~Q~~~P~i~~~~g~l~l~~~~~i~~~P~GhGdv~~aL~~sG~~~~~~~~~~~~~~~~~~lLd~l~~~G 262 (630)
T 3ogz_A 186 LEVP-N--LHVLKQGQVFCFADSAAHLALDETGKLLRKPHGHGDVHSLIYNATVKRDVVPDSGDGTATAQPLVNDWLAAG 262 (630)
T ss_dssp CCCT-T--EEEEECCCEECBSSTTCCBCBCTTSSBCEECCCTTHHHHHHHHCBC--------------CCBHHHHHHHTT
T ss_pred CCcc-c--EEEEEcCCEEEEecCCCceeecCCCcccCCCCCCHHHHHHHHHcCCCcccccccccccccHHHHHHHHHHcC
Confidence 3211 0 11111110 0001 256776644432 23333334
Q ss_pred CCeEEEEcCceeE-eccHHHHHHHHHhcCCceEEEEEeccCCCCCCccEEEE--cCCCCE-E-EEEecCcccccccccCC
Q 044626 115 VTEFLILPGHHLY-KMDYQRLIEAHRNNKADITIVALNAIRDKHPGFGLLRV--NPVNQV-I-EFSMKSERETITSISGK 189 (429)
Q Consensus 115 ~~~~lvl~gD~i~-~~~l~~~~~~~~~~~~~~ti~~~~~~~~~~~~~g~v~~--d~~~~v-~-~~~ek~~~~~~~~~~~~ 189 (429)
-+.+.+.+.|++. ...--.++-++..+++++.+-+.+.. ....-|.+.. +.+|+. . ...|=.+.+....-..+
T Consensus 263 ieyi~v~~vDN~L~~~~DP~~lG~~~~~~~d~~~kvv~r~--p~E~vG~l~~~~~~dGk~~~v~vVEYsei~~~~~~~~~ 340 (630)
T 3ogz_A 263 YESIVFIQDTNAGATITIPISLALSAEHSLDMNFTCIPRV--PKEPIGLLCRTKKNSGDPWLVANVEYNVFAEVSRALNK 340 (630)
T ss_dssp CCEEEEECTTBTTHHHHHHHHHHHHHHTTCSEEEEEECCC--SSCSSCEEEEEESSTTSCCEEEEECHHHHHHHHHHC--
T ss_pred CEEEEEEccCCccccccCHHHhHHHHhcCCCEEEEEEECC--CCcceeeEEEEecCCCceeeeeEEEeccCCHhHhhccC
Confidence 5899999999943 33333467788888888876554422 1233455543 245554 1 22331110000000000
Q ss_pred C--C-CCCCCCCCCCcceeeEEEEcHHHHHHHHHh
Q 044626 190 S--S-RKSDSVASGNFPSMGIYLINRDTMSRLLKE 221 (429)
Q Consensus 190 ~--~-~~~~~~~~~~~~~~Giy~~~~~~l~~~l~~ 221 (429)
. . ...........-++...+|+-+.+.+.++.
T Consensus 341 ~~g~~~~~~~~~~~f~GNtNnl~~~L~a~~~~l~~ 375 (630)
T 3ogz_A 341 DGGDEVSDPTGFSPFPGSVNTLVFKLSSYVDRLRE 375 (630)
T ss_dssp ----------CCCSSCEEEEEEEEEHHHHHHHHHH
T ss_pred CCccccccccccccccccceeeeEEHHHHHHHHHh
Confidence 0 0 000000122234889999999877667765
No 171
>2i5e_A Hypothetical protein MM_2497; APC86122, methanosarcina mazei GO1, hypothetic protein, STRU genomics, PSI-2, protein structure initiative; 2.10A {Methanosarcina mazei} SCOP: c.68.1.21
Probab=96.91 E-value=0.0025 Score=56.22 Aligned_cols=104 Identities=18% Similarity=0.208 Sum_probs=70.0
Q ss_pred CeEEEEEc--CCCCCCcccccccccccccccCCcchhHHHHHHhhHhcCCCeE-EEEeecChhHHHHHHhccccCcccCC
Q 044626 1 SVAAVVFG--DGSESRLYPLTKRRSEGAIPLAANYRLVDAVVSNCINSNINKI-YALTQFNSTSLNLHLSRAFSGILRGK 77 (429)
Q Consensus 1 ~m~avIla--~G~gsRl~plt~~~pK~Llpi~g~~plI~~~i~~l~~~gi~~I-~Iv~~~~~~~i~~~l~~~~~~~~~~~ 77 (429)
+|.+||++ +...|||.|. .........++ ||++|+++.+..++++.+ ++++++... . . + ++
T Consensus 3 ~~~~vip~k~g~~KtRL~~~---l~~~~~~~l~~-~ll~~vl~~l~~~~~~~v~vvv~~~~~~--~----~-~--~~--- 66 (211)
T 2i5e_A 3 AMRAVIPYKKAGAKSRLSPV---LSLQEREEFVE-LMLNQVISSLKGAGIEQVDILSPSVYGL--E----E-M--TE--- 66 (211)
T ss_dssp CCEEEEECCCTTTTGGGTTT---SCHHHHHHHHH-HHHHHHHHHHHHTTCSEEEEEESSCTTC--S----S-C--CS---
T ss_pred ceEEEEEeCCCCCccccCcc---CCHHHHHHHHH-HHHHHHHHHHHHcCCceEEEEEcCcHHH--H----h-h--cC---
Confidence 47899999 7778888731 11222225568 999999999999888998 888865421 1 1 0 11
Q ss_pred CCcEEEEeccccccccCcccCcHHHHHHHHHHhhcCCCCeEEEEcCce-eE-eccHHHHHH
Q 044626 78 DGFVEVIAAYQSLEDQDWFQGNADAIRRCLWVLEEYPVTEFLILPGHH-LY-KMDYQRLIE 136 (429)
Q Consensus 78 ~~~v~i~~~~~~~~~~~~~~Gt~~al~~~~~~i~~~~~~~~lvl~gD~-i~-~~~l~~~~~ 136 (429)
+.++ .+. .|.++++..+.+.+. +.++++.||+ +. ...+..+++
T Consensus 67 ---~~~v--~~~-------~gl~~sl~~a~~~~~----~~vlvi~~D~P~l~~~~i~~l~~ 111 (211)
T 2i5e_A 67 ---ARVL--LDE-------KDLNEALNRYLKEAE----EPVLIVMADLPLLSPEHIKEISS 111 (211)
T ss_dssp ---SEEE--ECC-------SCHHHHHHHHHHHCC----SCEEEECSCCTTCCHHHHHHHTT
T ss_pred ---CEEE--ECC-------CCHHHHHHHHHHhcC----CCEEEEcCCcCCCCHHHHHHHHc
Confidence 2232 121 378889998877662 7899999999 44 555666665
No 172
>3cgx_A Putative nucleotide-diphospho-sugar transferase; YP_389115.1, joint center for structural genomics; 1.90A {Desulfovibrio desulfuricans subsp}
Probab=87.73 E-value=1.5 Score=39.12 Aligned_cols=88 Identities=5% Similarity=-0.048 Sum_probs=58.7
Q ss_pred hhHHHHHHhhHhcCCCeEEEEeecChhHH---HHHHhccccCcccCCCCcEEEEeccccccccCcccCcHHHHHHHHHHh
Q 044626 34 RLVDAVVSNCINSNINKIYALTQFNSTSL---NLHLSRAFSGILRGKDGFVEVIAAYQSLEDQDWFQGNADAIRRCLWVL 110 (429)
Q Consensus 34 plI~~~i~~l~~~gi~~I~Iv~~~~~~~i---~~~l~~~~~~~~~~~~~~v~i~~~~~~~~~~~~~~Gt~~al~~~~~~i 110 (429)
+|+.++++.+...+.+.++++++.....+ ...+.. . +.+. .|. ..|.+.++.++...+
T Consensus 38 ~ll~~tl~~~~~~~~~~vvvvt~~~~~~~~~~~~~~~~--~---------~~~~--~q~------~~gLg~rl~~a~~~~ 98 (242)
T 3cgx_A 38 HFVQDMLQGLARLHADLHICYVPGDADLPEKFKAWLGP--Q---------HMFA--AQQ------GLDLGERMKHAMQKA 98 (242)
T ss_dssp HHHHHHHHHHTTSSSEEEEEECCCCTTHHHHHHHHHCT--T---------SEEE--ECC------SSSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCCEEEEEcCCchhhhhhhhhhccC--C---------cEEe--cCC------CCCHHHHHHHHHHHH
Confidence 89999999999988877777766554443 322211 1 1122 232 258889999988776
Q ss_pred hcCCCCeEEEEcCce--eEeccHHHHHHHHHh
Q 044626 111 EEYPVTEFLILPGHH--LYKMDYQRLIEAHRN 140 (429)
Q Consensus 111 ~~~~~~~~lvl~gD~--i~~~~l~~~~~~~~~ 140 (429)
.....+.++++.+|+ +....+..+++....
T Consensus 99 ~~~~~~~vliigaD~P~L~~~~l~~a~~~l~~ 130 (242)
T 3cgx_A 99 FDDGYDRVVLMGSDIPDYPCELVQKALNDLQH 130 (242)
T ss_dssp HHTTCSEEEEECSSCTTCCHHHHHHHHHHTTT
T ss_pred HhCCCCeEEEEcCCCCCCCHHHHHHHHHHhcc
Confidence 322237899999999 557778888776543
No 173
>1qg8_A Protein (spore coat polysaccharide biosynthesis P SPSA); glycosyltransferase, transferase; 1.50A {Bacillus subtilis} SCOP: c.68.1.1 PDB: 1h7q_A* 1h7l_A 1qgq_A* 1qgs_A*
Probab=83.39 E-value=17 Score=31.58 Aligned_cols=107 Identities=9% Similarity=0.090 Sum_probs=62.1
Q ss_pred ccccCCcchhHHHHHHhhHhcCCC--eEEEEeecChhHHHHHHhccccCcccCCCCcEEEEecccccc-ccCcccCcHHH
Q 044626 26 AIPLAANYRLVDAVVSNCINSNIN--KIYALTQFNSTSLNLHLSRAFSGILRGKDGFVEVIAAYQSLE-DQDWFQGNADA 102 (429)
Q Consensus 26 Llpi~g~~plI~~~i~~l~~~gi~--~I~Iv~~~~~~~i~~~l~~~~~~~~~~~~~~v~i~~~~~~~~-~~~~~~Gt~~a 102 (429)
.+|.-|+...|..+|+.+.+.... +|+|+-....+...+.+.+... ...+.++....... ......|.+.+
T Consensus 6 iIp~yn~~~~l~~~l~Sl~~q~~~~~eiivvDd~S~d~t~~~~~~~~~------~~~i~~i~~~~~~~~~~~~n~G~~~a 79 (255)
T 1qg8_A 6 IMTSYNKSDYVAKSISSILSQTFSDFELFIMDDNSNEETLNVIRPFLN------DNRVRFYQSDISGVKERTEKTRYAAL 79 (255)
T ss_dssp EEEESSCTTTHHHHHHHHHTCSCCCEEEEEEECSCCHHHHHHHGGGGG------STTEEEEECCCCSHHHHHSSCHHHHH
T ss_pred EEEcCCCHHHHHHHHHHHHhccCCceEEEEEECCCCchHHHHHHHHhh------cCCEEEEecccccccccccccCHHHH
Confidence 456656547899999998875543 4555543333444455544211 11244443220000 00001577788
Q ss_pred HHHHHHHhhcCCCCeEEEEcCceeEecc-HHHHHHHHHhc
Q 044626 103 IRRCLWVLEEYPVTEFLILPGHHLYKMD-YQRLIEAHRNN 141 (429)
Q Consensus 103 l~~~~~~i~~~~~~~~lvl~gD~i~~~~-l~~~~~~~~~~ 141 (429)
.-.+.+..+. +.++++.+|.+...+ +..+++.+.+.
T Consensus 80 ~N~gi~~a~g---~~i~~lD~Dd~~~~~~l~~~~~~~~~~ 116 (255)
T 1qg8_A 80 INQAIEMAEG---EYITYATDDNIYMPDRLLKMVRELDTH 116 (255)
T ss_dssp HHHHHHHCCC---SEEEEEETTEEECTTHHHHHHHHHHHC
T ss_pred HHHHHHHcCC---CEEEEeCCCCccChHHHHHHHHHHHhC
Confidence 7777776653 899999999988554 68888887765
No 174
>3bcv_A Putative glycosyltransferase protein; protein structure initiative II, PSI-II NYSGXRC, structural genomics; 2.35A {Bacteroides fragilis}
Probab=81.56 E-value=9.7 Score=32.88 Aligned_cols=104 Identities=13% Similarity=0.157 Sum_probs=64.1
Q ss_pred cccccCCcchhHHHHHHhhHhcCCC--eEEEEeecCh---hHHHHHHhccccCcccCCCCcEEEEeccccccccCcccCc
Q 044626 25 GAIPLAANYRLVDAVVSNCINSNIN--KIYALTQFNS---TSLNLHLSRAFSGILRGKDGFVEVIAAYQSLEDQDWFQGN 99 (429)
Q Consensus 25 ~Llpi~g~~plI~~~i~~l~~~gi~--~I~Iv~~~~~---~~i~~~l~~~~~~~~~~~~~~v~i~~~~~~~~~~~~~~Gt 99 (429)
-.+|.-|....|..+|+.+.+.... +|+|+-.... .++.+.+.+..+ .+.++. +. ..|.
T Consensus 9 ViIp~yn~~~~l~~~l~Sl~~q~~~~~eiIvvDd~S~d~t~~~~~~~~~~~~--------~i~~i~--~~------n~G~ 72 (240)
T 3bcv_A 9 VIVPIYNVEKYLDQCVQALLAQTLSDIEIILIDDESPDNCPKICDDYAAQYP--------NIKVIH--KK------NAGL 72 (240)
T ss_dssp EEEEESSCTTTHHHHHHHHHTCSSSSEEEEEEECCCSSSHHHHHHHHHHHCS--------SEEEEE--CC------CCCH
T ss_pred EEEecCCCHHHHHHHHHHHHhCcCCCeEEEEEECCCCcCHHHHHHHHHhhCC--------CEEEEE--CC------CCCh
Confidence 3566666547899999999875443 4555533222 223222222111 143442 21 1588
Q ss_pred HHHHHHHHHHhhcCCCCeEEEEcCceeEecc-HHHHHHHHHhcCCceEE
Q 044626 100 ADAIRRCLWVLEEYPVTEFLILPGHHLYKMD-YQRLIEAHRNNKADITI 147 (429)
Q Consensus 100 ~~al~~~~~~i~~~~~~~~lvl~gD~i~~~~-l~~~~~~~~~~~~~~ti 147 (429)
+.+.-.+++..+. +.++++.+|.+...+ +..+++.+.+.+.++.+
T Consensus 73 ~~a~N~g~~~a~g---~~i~~lD~Dd~~~~~~l~~l~~~~~~~~~~~v~ 118 (240)
T 3bcv_A 73 GMACNSGLDVATG---EYVAFCDSDDYVDSDMYMTMYNVAQKYTCDAVF 118 (240)
T ss_dssp HHHHHHHHHHCCS---SEEEECCTTCCCCTTHHHHHHHHHHHHTCSEEE
T ss_pred HHHHHHHHHHcCC---CEEEEECCCCcCCHHHHHHHHHHHHhcCCCEEE
Confidence 8888888877753 899999999977555 68888887776666543
No 175
>1xhb_A Polypeptide N-acetylgalactosaminyltransferase 1; glycosyltransferase-A (GT-A); HET: NAG BMA; 2.50A {Mus musculus} SCOP: b.42.2.1 c.68.1.17
Probab=67.86 E-value=41 Score=32.55 Aligned_cols=105 Identities=16% Similarity=0.086 Sum_probs=63.3
Q ss_pred ccccCCcc-hhHHHHHHhhHhcCC----CeEEEEeecChh-HHHHHHhccccCcccCCCCcEEEEeccccccccCcccCc
Q 044626 26 AIPLAANY-RLVDAVVSNCINSNI----NKIYALTQFNST-SLNLHLSRAFSGILRGKDGFVEVIAAYQSLEDQDWFQGN 99 (429)
Q Consensus 26 Llpi~g~~-plI~~~i~~l~~~gi----~~I~Iv~~~~~~-~i~~~l~~~~~~~~~~~~~~v~i~~~~~~~~~~~~~~Gt 99 (429)
.+|.-|.. ..|..+|+.+.+.-. .+|+||-....+ ...+.+++...... ..+.++.... ..|-
T Consensus 34 IIp~yN~~~~~l~~~l~Sl~~q~~~~~~~EIIvVDd~S~d~~t~~~l~~~~~~~~----~~v~vi~~~~-------n~G~ 102 (472)
T 1xhb_A 34 VIVFHNEAWSTLLRTVHSVINRSPRHMIEEIVLVDDASERDFLKRPLESYVKKLK----VPVHVIRMEQ-------RSGL 102 (472)
T ss_dssp EEEESSCCHHHHHHHHHHHHHSSCGGGEEEEEEEECSCCCGGGTHHHHHHHHSSS----SCEEEEECSS-------CCCH
T ss_pred EEEeCCCCHHHHHHHHHHHHhcCcHhHceEEEEEECCCCcHHHHHHHHHHHHHCC----CcEEEEECCC-------CCCh
Confidence 56777874 589999999877542 267666532221 12222322100011 0244443222 1588
Q ss_pred HHHHHHHHHHhhcCCCCeEEEEcCceeEecc-HHHHHHHHHhcCCc
Q 044626 100 ADAIRRCLWVLEEYPVTEFLILPGHHLYKMD-YQRLIEAHRNNKAD 144 (429)
Q Consensus 100 ~~al~~~~~~i~~~~~~~~lvl~gD~i~~~~-l~~~~~~~~~~~~~ 144 (429)
+.+...+++.... +.++++.+|.....+ +..+++.+.+....
T Consensus 103 ~~a~N~g~~~A~g---d~i~flD~D~~~~p~~L~~ll~~~~~~~~~ 145 (472)
T 1xhb_A 103 IRARLKGAAVSRG---QVITFLDAHCECTAGWLEPLLARIKHDRRT 145 (472)
T ss_dssp HHHHHHHHHHCCS---SEEEEEESSEEECTTCHHHHHHHHHHCTTE
T ss_pred HHHHHHHHHhccC---CeEEEECCCeEeCccHHHHHHHHHHhCCCE
Confidence 8888888777653 899999999987444 68888887765543
No 176
>2ffu_A Ppgalnact-2, polypeptide N-acetylgalactosaminyltransferase 2, protein-UDP; ppgalnact, mucin, glycosyltransferase; HET: UDP; 1.64A {Homo sapiens} PDB: 2ffv_A*
Probab=64.60 E-value=39 Score=33.07 Aligned_cols=100 Identities=13% Similarity=0.127 Sum_probs=62.8
Q ss_pred ccccCCcch-hHHHHHHhhHhcCC-C---eEEEEeecC-hhHHHHHHhccccCcccCCCCcEEEEeccccccccCcccCc
Q 044626 26 AIPLAANYR-LVDAVVSNCINSNI-N---KIYALTQFN-STSLNLHLSRAFSGILRGKDGFVEVIAAYQSLEDQDWFQGN 99 (429)
Q Consensus 26 Llpi~g~~p-lI~~~i~~l~~~gi-~---~I~Iv~~~~-~~~i~~~l~~~~~~~~~~~~~~v~i~~~~~~~~~~~~~~Gt 99 (429)
.+|.-|... .|..+|+.+.+.-. . +|+||-... ...+.+.+.+ .+ .+.++.... ..|.
T Consensus 71 IIp~yN~~~~~L~~~l~Sl~~q~~~~~~~EIIvVDDgS~D~t~~~~~~~-~~--------~v~vi~~~~-------n~G~ 134 (501)
T 2ffu_A 71 VITFHNEARSALLRTVVSVLKKSPPHLIKEIILVDDYSNDPEDGALLGK-IE--------KVRVLRNDR-------REGL 134 (501)
T ss_dssp EEEESSCCHHHHHHHHHHHHHHSCGGGEEEEEEEECSCSCTHHHHGGGG-BT--------TEEEEECSS-------CCHH
T ss_pred EEEeCcCcHHHHHHHHHHHHhhCchhhceeEEEEECCCCchHHHHHHhc-CC--------CEEEEECCC-------CcCH
Confidence 466677633 79999999876432 2 676664322 2233344332 11 244443222 1588
Q ss_pred HHHHHHHHHHhhcCCCCeEEEEcCceeEec-cHHHHHHHHHhcCCc
Q 044626 100 ADAIRRCLWVLEEYPVTEFLILPGHHLYKM-DYQRLIEAHRNNKAD 144 (429)
Q Consensus 100 ~~al~~~~~~i~~~~~~~~lvl~gD~i~~~-~l~~~~~~~~~~~~~ 144 (429)
+.++..+++.... +.++++.+|..... -|..+++.+.+....
T Consensus 135 ~~A~N~G~~~A~g---d~i~flD~D~~~~p~~L~~ll~~~~~~~~~ 177 (501)
T 2ffu_A 135 MRSRVRGADAAQA---KVLTFLDSHCECNEHWLEPLLERVAEDRTR 177 (501)
T ss_dssp HHHHHHHHHHCCS---SEEEECCSSEEECTTCHHHHHHHHHHCTTE
T ss_pred HHHHHHHHHhcCC---CEEEEECCCcccCccHHHHHHHHHHhCCCe
Confidence 8888888877753 89999999997744 478888888775543
No 177
>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A*
Probab=58.48 E-value=69 Score=32.24 Aligned_cols=104 Identities=9% Similarity=-0.080 Sum_probs=63.2
Q ss_pred ccccCCcchhHHHHHHhhHhcC---CCeEEEEeecChhHHHHHHhccccCcccCCCCcEEEEeccccccccCcccCcHHH
Q 044626 26 AIPLAANYRLVDAVVSNCINSN---INKIYALTQFNSTSLNLHLSRAFSGILRGKDGFVEVIAAYQSLEDQDWFQGNADA 102 (429)
Q Consensus 26 Llpi~g~~plI~~~i~~l~~~g---i~~I~Iv~~~~~~~i~~~l~~~~~~~~~~~~~~v~i~~~~~~~~~~~~~~Gt~~a 102 (429)
++|.-|....|..+|+.+.... --+|+|+-....+...+.+.+.... ..+.++..... ..|.+.+
T Consensus 98 iIp~~n~~~~l~~~l~sl~~q~~~~~~eiivvDd~s~d~t~~~~~~~~~~------~~i~~i~~~~~------~~g~~~a 165 (625)
T 2z86_A 98 VIPTYNRAKILAITLACLCNQKTIYDYEVIVADDGSKENIEEIVREFESL------LNIKYVRQKDY------GYQLCAV 165 (625)
T ss_dssp EEEESSCHHHHHHHHHHHHTCCCSSCEEEEEEEESCSSCHHHHHHTTTTT------SCEEEEEECCC------SCCHHHH
T ss_pred EEecCCcHHHHHHHHHHHHhhccCCCeEEEEEeCCCchhHHHHHHHhhhc------CCeEEEEeCCC------CcchhHH
Confidence 4666776468999999997653 3456666543333344444442110 12333322110 1357778
Q ss_pred HHHHHHHhhcCCCCeEEEEcCceeEecc-HHHHHHHHHhcCCc
Q 044626 103 IRRCLWVLEEYPVTEFLILPGHHLYKMD-YQRLIEAHRNNKAD 144 (429)
Q Consensus 103 l~~~~~~i~~~~~~~~lvl~gD~i~~~~-l~~~~~~~~~~~~~ 144 (429)
+-.+++... .+.++++.+|.+...+ +..+++.+.+....
T Consensus 166 ~N~g~~~a~---g~~v~~lD~D~~~~~~~l~~~~~~~~~~~~~ 205 (625)
T 2z86_A 166 RNLGLRAAK---YNYVAILDCDMAPNPLWVQSYMELLAVDDNV 205 (625)
T ss_dssp HHHHHHHCC---SSEEEEECTTEEECTTHHHHHHHHHHHCTTE
T ss_pred HHHHHHhCC---cCEEEEECCCCCCCHHHHHHHHHHHhcCCce
Confidence 777877665 3899999999988555 58888877765443
No 178
>2d7i_A Polypeptide N-acetylgalactosaminyltransferase 10; beta trefoil, rossmann fold; HET: NAG NGA UDP; 2.50A {Homo sapiens} PDB: 2d7r_A*
Probab=56.67 E-value=72 Score=31.89 Aligned_cols=102 Identities=15% Similarity=0.142 Sum_probs=61.4
Q ss_pred ccccCCcc-hhHHHHHHhhHhcCC-C---eEEEEeecCh-hHHHHHHhccccCcccCCCCcEEEEeccccccccCcccCc
Q 044626 26 AIPLAANY-RLVDAVVSNCINSNI-N---KIYALTQFNS-TSLNLHLSRAFSGILRGKDGFVEVIAAYQSLEDQDWFQGN 99 (429)
Q Consensus 26 Llpi~g~~-plI~~~i~~l~~~gi-~---~I~Iv~~~~~-~~i~~~l~~~~~~~~~~~~~~v~i~~~~~~~~~~~~~~Gt 99 (429)
.+|.-|.. ..|..+|+.+.+... . +|+||-.... ..+.+.+.+..... ..+.++.... ..|-
T Consensus 117 IIp~yNe~~~~L~~~L~Sll~qt~~~~~~EIIVVDDgS~D~tl~~~l~~~~~~~-----~~v~vi~~~~-------n~G~ 184 (570)
T 2d7i_A 117 IIPFHNEGWSSLLRTVHSVLNRSPPELVAEIVLVDDFSDREHLKKPLEDYMALF-----PSVRILRTKK-------REGL 184 (570)
T ss_dssp EEEESSCCHHHHHHHHHHHHHHSCGGGEEEEEEEECSCCCGGGTHHHHHHHTTS-----TTEEEEECSS-------CCCH
T ss_pred EEEECCCCHHHHHHHHHHHHhcCCccCcEEEEEEECCCCcHHHHHHHHHHHHhC-----CeEEEEECCC-------CCCH
Confidence 46677873 488899999876432 2 6766643221 11123332211101 1244443221 1588
Q ss_pred HHHHHHHHHHhhcCCCCeEEEEcCceeEecc-HHHHHHHHHhcC
Q 044626 100 ADAIRRCLWVLEEYPVTEFLILPGHHLYKMD-YQRLIEAHRNNK 142 (429)
Q Consensus 100 ~~al~~~~~~i~~~~~~~~lvl~gD~i~~~~-l~~~~~~~~~~~ 142 (429)
+.+...+++.... +.++++.+|.....+ |..+++.+.+..
T Consensus 185 ~~A~N~G~~~A~g---d~i~fLD~D~~~~p~~L~~ll~~l~~~~ 225 (570)
T 2d7i_A 185 IRTRMLGASVATG---DVITFLDSHCEANVNWLPPLLDRIARNR 225 (570)
T ss_dssp HHHHHHHHHHCCS---SEEEECCSSEEECTTCSHHHHHHHHHCT
T ss_pred HHHHHHHHHhcCC---CEEEEEcCCccccccHHHHHHHHHHhCC
Confidence 8888888877653 899999999988554 688888877644
No 179
>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A*
Probab=52.26 E-value=96 Score=31.14 Aligned_cols=101 Identities=14% Similarity=0.134 Sum_probs=60.3
Q ss_pred ccccCCcchhHHHHHHhhHhcCCC--eEEEEeecChhHHHHHHhccccCcccCCCCcEEEEeccccccccCcccCcHHHH
Q 044626 26 AIPLAANYRLVDAVVSNCINSNIN--KIYALTQFNSTSLNLHLSRAFSGILRGKDGFVEVIAAYQSLEDQDWFQGNADAI 103 (429)
Q Consensus 26 Llpi~g~~plI~~~i~~l~~~gi~--~I~Iv~~~~~~~i~~~l~~~~~~~~~~~~~~v~i~~~~~~~~~~~~~~Gt~~al 103 (429)
++|..|....|..+|+.+...... +|+|+-....+...+.+.+..... ..+.++. +. -.|.+.++
T Consensus 380 ii~~yn~~~~l~~~l~s~~~q~~~~~eiivvdd~S~d~t~~~~~~~~~~~-----~~i~~~~--~~------n~G~~~a~ 446 (625)
T 2z86_A 380 YIPAYNCSKYIVRCVESALNQTITDLEVCICDDGSTDDTLRILQEHYANH-----PRVRFIS--QK------NKGIGSAS 446 (625)
T ss_dssp EEEESSCTTTHHHHHHHHHSSSCCSEEEEEEEESCSSSHHHHHHHHHTTC-----TTEEEEE--EC------CCCHHHHH
T ss_pred EEeCCCCHHHHHHHHHHHHhCcCCCeEEEEEECcCChhHHHHHHHHHhhC-----CcEEEEe--CC------CCCHHHHH
Confidence 455556547999999998765432 555554332222333333211100 1244442 21 15888888
Q ss_pred HHHHHHhhcCCCCeEEEEcCceeEecc-HHHHHHHHHhcC
Q 044626 104 RRCLWVLEEYPVTEFLILPGHHLYKMD-YQRLIEAHRNNK 142 (429)
Q Consensus 104 ~~~~~~i~~~~~~~~lvl~gD~i~~~~-l~~~~~~~~~~~ 142 (429)
-.+++.... +.++++.+|.+...+ +..+++.+.+..
T Consensus 447 n~g~~~a~g---~~i~~ld~D~~~~~~~l~~~~~~~~~~~ 483 (625)
T 2z86_A 447 NTAVRLCRG---FYIGQLDSDDFLEPDAVELCLDEFRKDL 483 (625)
T ss_dssp HHHHHHCCS---SEEEECCTTCEECTTHHHHHHHHHHHCT
T ss_pred HHHHHhcCC---CEEEEECCCcccChhHHHHHHHHHHhCC
Confidence 888876653 899999999988554 678887776543
No 180
>4fix_A UDP-galactofuranosyl transferase GLFT2; CAZY GT-2 family, glycosyltrans carbohydrate binding, membrane; 2.45A {Mycobacterium tuberculosis} PDB: 4fiy_A*
Probab=47.36 E-value=76 Score=32.48 Aligned_cols=103 Identities=15% Similarity=0.118 Sum_probs=62.2
Q ss_pred ccccCCcchhHHHHHHhhHhc-----CCCeEEEEeecCh-----hHHHHHHhccccCcccCCCCcEEEEeccccccccCc
Q 044626 26 AIPLAANYRLVDAVVSNCINS-----NINKIYALTQFNS-----TSLNLHLSRAFSGILRGKDGFVEVIAAYQSLEDQDW 95 (429)
Q Consensus 26 Llpi~g~~plI~~~i~~l~~~-----gi~~I~Iv~~~~~-----~~i~~~l~~~~~~~~~~~~~~v~i~~~~~~~~~~~~ 95 (429)
.+|.-|+...|...|+.|.+. ...+|+||=+... ..+.+.+....+ .+.++... +
T Consensus 185 VIptYN~~~~L~~~L~SL~~qt~~~~~~~EIIVVDNgStD~s~~~~~~e~~~~~~~--------~I~vI~~~----N--- 249 (657)
T 4fix_A 185 GIPTFNRPADCVNALRELTADPLVDQVIGAVIVPDQGERKVRDHPDFPAAAARLGS--------RLSIHDQP----N--- 249 (657)
T ss_dssp ECCBSSCHHHHHHHHHHHTTSHHHHTTEEEEEEEECSSSCGGGSTTHHHHHHHHGG--------GEEEEECC----C---
T ss_pred EEEecCCHHHHHHHHHHHHcCccccCCCCEEEEEECcCCCccchHHHHHHHHhcCC--------CEEEEECC----C---
Confidence 355556547899999998764 2346666643221 134444443221 24444221 1
Q ss_pred ccCcHHHHHHHHHHhhcC-CCCeEEEEcCceeEecc-HHHHHHHHHhcCCc
Q 044626 96 FQGNADAIRRCLWVLEEY-PVTEFLILPGHHLYKMD-YQRLIEAHRNNKAD 144 (429)
Q Consensus 96 ~~Gt~~al~~~~~~i~~~-~~~~~lvl~gD~i~~~~-l~~~~~~~~~~~~~ 144 (429)
.|-+.+.-.++...... ..+.+++++.|.+...+ +..+++.+......
T Consensus 250 -~G~a~a~N~Gl~~A~g~~~~dyIlfLD~D~~~~pd~L~~ll~~l~~~~~~ 299 (657)
T 4fix_A 250 -LGGSGGYSRVMYEALKNTDCQQILFMDDDIRLEPDSILRVLAMHRFAKAP 299 (657)
T ss_dssp -CHHHHHHHHHHHHHHHHCCCSEEEEECSSEEECTHHHHHHHHHHHHBSSC
T ss_pred -CCHHHHHHHHHHHHHhcCCCCEEEEECCCCccChhHHHHHHHHHHhCCCc
Confidence 57778877777666421 23799999999988554 68888888775444
No 181
>3ckj_A Putative uncharacterized protein; mycobacteria, unknown function; HET: CIT; 1.80A {Mycobacterium paratuberculosis} PDB: 3ckn_A* 3cko_A* 3ckq_A* 3ckv_A* 3e26_A 3e25_A
Probab=45.20 E-value=1.1e+02 Score=27.74 Aligned_cols=109 Identities=8% Similarity=0.064 Sum_probs=61.6
Q ss_pred ccccCCcchhHHHHHHhhHhc--C-CCeEEEEeecChhHHHHHHhccccCcccCCCCcEEEEeccccccccCcccCcHHH
Q 044626 26 AIPLAANYRLVDAVVSNCINS--N-INKIYALTQFNSTSLNLHLSRAFSGILRGKDGFVEVIAAYQSLEDQDWFQGNADA 102 (429)
Q Consensus 26 Llpi~g~~plI~~~i~~l~~~--g-i~~I~Iv~~~~~~~i~~~l~~~~~~~~~~~~~~v~i~~~~~~~~~~~~~~Gt~~a 102 (429)
.+|..|....|..+|+.+.+. . ..+|+|+-....+...+.+.+... +....+.++.... . ..|.+.+
T Consensus 53 iIp~yN~~~~l~~~l~sl~~q~~~~~~eiivVDdgS~D~t~~~~~~~~~----~~~~~~~~~~~~~--~----n~G~~~a 122 (329)
T 3ckj_A 53 VLPALDEEDTIGSVIDSISPLVDGLVDELIVLDSGSTDDTEIRAVAAGA----RVVSREQALPEVP--I----RPGKGEA 122 (329)
T ss_dssp EEEESSCTTTHHHHHHHHGGGBTTTBSEEEEEECSCCSSHHHHHHHTTC----EEEEHHHHCTTSC--C----CCSHHHH
T ss_pred EEeeCCCHHHHHHHHHHHHHhhCCCCcEEEEEeCCCCchHHHHHHHhhh----hhccceeeeccCC--C----CCCHHHH
Confidence 466666547889999998765 2 256777653322333333433111 0000000100011 1 2688899
Q ss_pred HHHHHHHhhcCCCCeEEEEcCcee-Eecc-HHHHHHHHHhc-CCceEE
Q 044626 103 IRRCLWVLEEYPVTEFLILPGHHL-YKMD-YQRLIEAHRNN-KADITI 147 (429)
Q Consensus 103 l~~~~~~i~~~~~~~~lvl~gD~i-~~~~-l~~~~~~~~~~-~~~~ti 147 (429)
+..+++.... +.++++.+|.+ ...+ +..+++...+. +.+++.
T Consensus 123 ~n~g~~~a~g---d~i~~lD~D~~~~~p~~l~~l~~~l~~~~~~~~v~ 167 (329)
T 3ckj_A 123 LWRSLAASRG---DIVVFVDSDLINPHPMFVPWLVGPLLTGDGVHLVK 167 (329)
T ss_dssp HHHHHHHCCC---SEEEECCTTEESCCTTHHHHHHHHHHSCSSCCEEE
T ss_pred HHHHHHhCCC---CEEEEECCCCCCcChHHHHHHHHHHHhCCCccEEE
Confidence 9888876653 89999999998 6544 68888775443 444433
No 182
>3f1y_A Mannosyl-3-phosphoglycerate synthase; GT-A type glycosyltransferase, GT-81, mannosyl-3-phosphoglyc synthase, GDP-mannose, transferas; 2.20A {Rubrobacter xylanophilus} PDB: 3kia_A* 3o3p_A*
Probab=41.14 E-value=86 Score=29.65 Aligned_cols=112 Identities=13% Similarity=0.069 Sum_probs=62.6
Q ss_pred cccccCCcchhHHHHHHhhHh----c-CCCeEEEEeecChhHHHHHHhccccCcccCCCCcEEEEeccccccccCcccCc
Q 044626 25 GAIPLAANYRLVDAVVSNCIN----S-NINKIYALTQFNSTSLNLHLSRAFSGILRGKDGFVEVIAAYQSLEDQDWFQGN 99 (429)
Q Consensus 25 ~Llpi~g~~plI~~~i~~l~~----~-gi~~I~Iv~~~~~~~i~~~l~~~~~~~~~~~~~~v~i~~~~~~~~~~~~~~Gt 99 (429)
-.+|..|....|..+|+.+.. . ...+|+||-....+...+.+.+. +. ++..........+...|.
T Consensus 98 VVIP~yNe~~~l~~~l~sl~~~l~~~~~~~EIIVVDDgStD~T~~i~~~~----~~------~v~~~~~~~i~~~~n~G~ 167 (387)
T 3f1y_A 98 AVLPSRNVADTVGGIIDEIHALNERAPLIDQILVVDADSEDGTAGVAASH----GA------EVYSENELMSGYGDAHGK 167 (387)
T ss_dssp EEEEESSCTTTHHHHHHHHHHHHHHSCCCSEEEEEECSCSSSHHHHHHHT----TC------EEEEGGGTTGGGCSCCSH
T ss_pred EEEEcCCCHHHHHHHHHHHHHHHhcCCCCeEEEEEcCcCCccHHHHHHHh----Cc------hhcccceeEecCCccCCH
Confidence 366777764678888887754 2 24567666543323333333331 11 111100000000002688
Q ss_pred HHHHHHHHHHhhcCCCCeEEEEcCcee-Eec-cHHHHHHHHHhc-CCceEEEE
Q 044626 100 ADAIRRCLWVLEEYPVTEFLILPGHHL-YKM-DYQRLIEAHRNN-KADITIVA 149 (429)
Q Consensus 100 ~~al~~~~~~i~~~~~~~~lvl~gD~i-~~~-~l~~~~~~~~~~-~~~~ti~~ 149 (429)
+.++..+.+... .+.++++.+|.. ... .+..+++...+. +.+++...
T Consensus 168 g~A~n~G~~~A~---gd~i~~lDaD~~~~~p~~L~~l~~~l~~~p~~d~v~G~ 217 (387)
T 3f1y_A 168 GDAMWRALSVTR---GDLVLYIDADTRDFRPQLAYGVLGPVLEVPGVRFVKAA 217 (387)
T ss_dssp HHHHHHHTTTCC---SSEEEECCTTCSSCCTHHHHTTHHHHHHSTTCCEEEEE
T ss_pred HHHHHHHHHhcC---CCEEEEEcCCCCcCCHHHHHHHHHHHHHCCCceEEEEe
Confidence 899988876654 388899999998 644 468888877664 56665543
No 183
>4hg6_A Cellulose synthase subunit A; membrane translocation, cellulose synthesis, UDP-GLC binding membrane, transferase; HET: BGC UDP LDA; 3.25A {Rhodobacter sphaeroides}
Probab=29.14 E-value=1.6e+02 Score=30.81 Aligned_cols=42 Identities=14% Similarity=0.204 Sum_probs=32.4
Q ss_pred cCcHHHHHHHHHHhhcCCCCeEEEEcCceeEecc-HHHHHHHHHhc
Q 044626 97 QGNADAIRRCLWVLEEYPVTEFLILPGHHLYKMD-YQRLIEAHRNN 141 (429)
Q Consensus 97 ~Gt~~al~~~~~~i~~~~~~~~lvl~gD~i~~~~-l~~~~~~~~~~ 141 (429)
.|.++++..+.+..+. +.++++.+|.....+ +..+++.+.+.
T Consensus 224 ~GKa~alN~gl~~a~g---d~Il~lDaD~~~~pd~L~~lv~~~~~d 266 (802)
T 4hg6_A 224 HAKAGNMSAALERLKG---ELVVVFDADHVPSRDFLARTVGYFVED 266 (802)
T ss_dssp SHHHHHHHHHHHHCCC---SEEEECCTTEEECTTHHHHHHHHHHHS
T ss_pred CcchHHHHHHHHhcCC---CEEEEECCCCCcChHHHHHHHHHHhcC
Confidence 4777888888776653 899999999988555 68888887553
Done!