BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 044628
(665 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O82363|PP203_ARATH Pentatricopeptide repeat-containing protein At2g46050,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E39 PE=3
SV=1
Length = 590
Score = 546 bits (1407), Expect = e-154, Method: Compositional matrix adjust.
Identities = 272/547 (49%), Positives = 363/547 (66%), Gaps = 15/547 (2%)
Query: 71 KVSAKFGFLQQGKQLHSHIMKLGLCNKLSLQNQVLHVYVKCKAFDDMEKLFDEMRVRNIV 130
K+SA L KQ H ++K G+ N L LQN++L Y K + FDD +KLFDEM +RNIV
Sbjct: 44 KLSASLDHLSDVKQEHGFMVKQGIYNSLFLQNKLLQAYTKIREFDDADKLFDEMPLRNIV 103
Query: 131 TWNTLISGIINCGGNVTP-------YFRRMLLDNVRLDHITFNSLLRACVQADDIEVGRR 183
TWN LI G+I G+ Y R+L +V LDH++F L+R C + +++ G +
Sbjct: 104 TWNILIHGVIQRDGDTNHRAHLGFCYLSRILFTDVSLDHVSFMGLIRLCTDSTNMKAGIQ 163
Query: 184 LHSFILKVGFGLNCFVSSALVDLYGKCGFVEDARRVFDEVLCRDLVLWNVMVSCYALNCL 243
LH ++K G +CF S++LV YGKCG + +ARRVF+ VL RDLVLWN +VS Y LN +
Sbjct: 164 LHCLMVKQGLESSCFPSTSLVHFYGKCGLIVEARRVFEAVLDRDLVLWNALVSSYVLNGM 223
Query: 244 GDGAIAVFNLMRLEG--MKGDYFTFSSLVNSCGTLGSSKLGRQIHGLVIKQSFDLDVLVA 301
D A + LM + +GDYFTFSSL+++C + G+QIH ++ K S+ D+ VA
Sbjct: 224 IDEAFGLLKLMGSDKNRFRGDYFTFSSLLSACRI----EQGKQIHAILFKVSYQFDIPVA 279
Query: 302 TSLVDMYAKNGNIDDACRVFDGMTAKNVVSWNTMVVGFGQNGDGREAVKLLRDMLQGSFC 361
T+L++MYAK+ ++ DA F+ M +NVVSWN M+VGF QNG+GREA++L ML +
Sbjct: 280 TALLNMYAKSNHLSDARECFESMVVRNVVSWNAMIVGFAQNGEGREAMRLFGQMLLENLQ 339
Query: 362 PDEVTLASILSSCGSLSISCETRQVHAYAIKNGVQAFLSIENALINAYSKCGSIAGALQC 421
PDE+T AS+LSSC S E +QV A K G FLS+ N+LI++YS+ G+++ AL C
Sbjct: 340 PDELTFASVLSSCAKFSAIWEIKQVQAMVTKKGSADFLSVANSLISSYSRNGNLSEALLC 399
Query: 422 FGSVKEPDLVTWTSIIGAYAFHGLSKESIEVFEKMLSHAVRPDSIAFLEVLSACSHGGLV 481
F S++EPDLV+WTS+IGA A HG ++ES+++FE ML ++PD I FLEVLSACSHGGLV
Sbjct: 400 FHSIREPDLVSWTSVIGALASHGFAEESLQMFESML-QKLQPDKITFLEVLSACSHGGLV 458
Query: 482 SEGLRYFNLMISDYHILPDSEHYTCLTDLLGRVGLLVEAYDLLASMPIEPRSDTLGAFIG 541
EGLR F M Y I + EHYTCL DLLGR G + EA D+L SMP EP + L AF G
Sbjct: 459 QEGLRCFKRMTEFYKIEAEDEHYTCLIDLLGRAGFIDEASDVLNSMPTEPSTHALAAFTG 518
Query: 542 ACKVHGSIGLAKWAAEKLLELEPSKPVNYALVSNVYASERCWFDVARLRKMMRDNC-DHK 600
C +H KW A+KLLE+EP+KPVNY+++SN Y SE W A LRK R NC + K
Sbjct: 519 GCNIHEKRESMKWGAKKLLEIEPTKPVNYSILSNAYVSEGHWNQAALLRKRERRNCYNPK 578
Query: 601 VPGCSWI 607
PGCSW+
Sbjct: 579 TPGCSWL 585
>sp|Q9STE1|PP333_ARATH Pentatricopeptide repeat-containing protein At4g21300
OS=Arabidopsis thaliana GN=PCMP-E36 PE=3 SV=1
Length = 857
Score = 404 bits (1039), Expect = e-112, Method: Compositional matrix adjust.
Identities = 206/572 (36%), Positives = 342/572 (59%), Gaps = 3/572 (0%)
Query: 70 LKVSAKFGFLQQGKQLHSHIMKLGLCNKLSLQNQVLHVYVKCKAFDDMEKLFDEMRVRNI 129
L V A + G QLH ++ G+ + S++N +L +Y KC FDD KLF M +
Sbjct: 246 LSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMSRADT 305
Query: 130 VTWNTLISGIINCG--GNVTPYFRRMLLDNVRLDHITFNSLLRACVQADDIEVGRRLHSF 187
VTWN +ISG + G +F M+ V D ITF+SLL + + +++E +++H +
Sbjct: 306 VTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLLPSVSKFENLEYCKQIHCY 365
Query: 188 ILKVGFGLNCFVSSALVDLYGKCGFVEDARRVFDEVLCRDLVLWNVMVSCYALNCLGDGA 247
I++ L+ F++SAL+D Y KC V A+ +F + D+V++ M+S Y N L +
Sbjct: 366 IMRHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQCNSVDVVVFTAMISGYLHNGLYIDS 425
Query: 248 IAVFNLMRLEGMKGDYFTFSSLVNSCGTLGSSKLGRQIHGLVIKQSFDLDVLVATSLVDM 307
+ +F + + + T S++ G L + KLGR++HG +IK+ FD + +++DM
Sbjct: 426 LEMFRWLVKVKISPNEITLVSILPVIGILLALKLGRELHGFIIKKGFDNRCNIGCAVIDM 485
Query: 308 YAKNGNIDDACRVFDGMTAKNVVSWNTMVVGFGQNGDGREAVKLLRDMLQGSFCPDEVTL 367
YAK G ++ A +F+ ++ +++VSWN+M+ Q+ + A+ + R M C D V++
Sbjct: 486 YAKCGRMNLAYEIFERLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICYDCVSI 545
Query: 368 ASILSSCGSLSISCETRQVHAYAIKNGVQAFLSIENALINAYSKCGSIAGALQCFGSVKE 427
++ LS+C +L + +H + IK+ + + + E+ LI+ Y+KCG++ A+ F ++KE
Sbjct: 546 SAALSACANLPSESFGKAIHGFMIKHSLASDVYSESTLIDMYAKCGNLKAAMNVFKTMKE 605
Query: 428 PDLVTWTSIIGAYAFHGLSKESIEVFEKMLSHA-VRPDSIAFLEVLSACSHGGLVSEGLR 486
++V+W SII A HG K+S+ +F +M+ + +RPD I FLE++S+C H G V EG+R
Sbjct: 606 KNIVSWNSIIAACGNHGKLKDSLCLFHEMVEKSGIRPDQITFLEIISSCCHVGDVDEGVR 665
Query: 487 YFNLMISDYHILPDSEHYTCLTDLLGRVGLLVEAYDLLASMPIEPRSDTLGAFIGACKVH 546
+F M DY I P EHY C+ DL GR G L EAY+ + SMP P + G +GAC++H
Sbjct: 666 FFRSMTEDYGIQPQQEHYACVVDLFGRAGRLTEAYETVKSMPFPPDAGVWGTLLGACRLH 725
Query: 547 GSIGLAKWAAEKLLELEPSKPVNYALVSNVYASERCWFDVARLRKMMRDNCDHKVPGCSW 606
++ LA+ A+ KL++L+PS Y L+SN +A+ R W V ++R +M++ K+PG SW
Sbjct: 726 KNVELAEVASSKLMDLDPSNSGYYVLISNAHANAREWESVTKVRSLMKEREVQKIPGYSW 785
Query: 607 IEIAGEIHTFVSSDRSHPQAVHMYAMLCTVFG 638
IEI H FVS D +HP++ H+Y++L ++ G
Sbjct: 786 IEINKRTHLFVSGDVNHPESSHIYSLLNSLLG 817
Score = 213 bits (543), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 127/431 (29%), Positives = 224/431 (51%), Gaps = 6/431 (1%)
Query: 46 SSQLRNSGTIHESTHSAHSFYSQALKVSAKFGFLQQGKQLHSHIMKLGLCNKLSLQNQVL 105
S LRNS E T S L+ + L+QGKQ+H+ ++ + ++L
Sbjct: 20 SLPLRNSSRFLEETIPRR--LSLLLQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERIL 77
Query: 106 HVYVKCKAFDDMEKLFDEMRVR--NIVTWNTLISGIINCG--GNVTPYFRRMLLDNVRLD 161
+Y C +F D K+F + +R +I WN++IS + G ++ +ML V D
Sbjct: 78 GMYAMCGSFSDCGKMFYRLDLRRSSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPD 137
Query: 162 HITFNSLLRACVQADDIEVGRRLHSFILKVGFGLNCFVSSALVDLYGKCGFVEDARRVFD 221
TF L++ACV + + L + +G N FV+S+L+ Y + G ++ ++FD
Sbjct: 138 VSTFPCLVKACVALKNFKGIDFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFD 197
Query: 222 EVLCRDLVLWNVMVSCYALNCLGDGAIAVFNLMRLEGMKGDYFTFSSLVNSCGTLGSSKL 281
VL +D V+WNVM++ YA D I F++MR++ + + TF +++ C + L
Sbjct: 198 RVLQKDCVIWNVMLNGYAKCGALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDL 257
Query: 282 GRQIHGLVIKQSFDLDVLVATSLVDMYAKNGNIDDACRVFDGMTAKNVVSWNTMVVGFGQ 341
G Q+HGLV+ D + + SL+ MY+K G DDA ++F M+ + V+WN M+ G+ Q
Sbjct: 258 GVQLHGLVVVSGVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQ 317
Query: 342 NGDGREAVKLLRDMLQGSFCPDEVTLASILSSCGSLSISCETRQVHAYAIKNGVQAFLSI 401
+G E++ +M+ PD +T +S+L S +Q+H Y +++ + + +
Sbjct: 318 SGLMEESLTFFYEMISSGVLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFL 377
Query: 402 ENALINAYSKCGSIAGALQCFGSVKEPDLVTWTSIIGAYAFHGLSKESIEVFEKMLSHAV 461
+ALI+AY KC ++ A F D+V +T++I Y +GL +S+E+F ++ +
Sbjct: 378 TSALIDAYFKCRGVSMAQNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKI 437
Query: 462 RPDSIAFLEVL 472
P+ I + +L
Sbjct: 438 SPNEITLVSIL 448
Score = 196 bits (497), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 129/468 (27%), Positives = 234/468 (50%), Gaps = 6/468 (1%)
Query: 85 LHSHIMKLGL-CNKLSLQNQVLHVYVKCKAFDDMEKLFDEMRVRNIVTWNTLISGIINCG 143
L + LG+ CN+ + + ++ Y++ D KLFD + ++ V WN +++G CG
Sbjct: 160 LSDTVSSLGMDCNEF-VASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCG 218
Query: 144 G--NVTPYFRRMLLDNVRLDHITFNSLLRACVQADDIEVGRRLHSFILKVGFGLNCFVSS 201
+V F M +D + + +TF+ +L C I++G +LH ++ G + +
Sbjct: 219 ALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKN 278
Query: 202 ALVDLYGKCGFVEDARRVFDEVLCRDLVLWNVMVSCYALNCLGDGAIAVFNLMRLEGMKG 261
+L+ +Y KCG +DA ++F + D V WN M+S Y + L + ++ F M G+
Sbjct: 279 SLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLP 338
Query: 262 DYFTFSSLVNSCGTLGSSKLGRQIHGLVIKQSFDLDVLVATSLVDMYAKNGNIDDACRVF 321
D TFSSL+ S + + +QIH +++ S LD+ + ++L+D Y K + A +F
Sbjct: 339 DAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIF 398
Query: 322 DGMTAKNVVSWNTMVVGFGQNGDGREAVKLLRDMLQGSFCPDEVTLASILSSCGSLSISC 381
+ +VV + M+ G+ NG +++++ R +++ P+E+TL SIL G L
Sbjct: 399 SQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILLALK 458
Query: 382 ETRQVHAYAIKNGVQAFLSIENALINAYSKCGSIAGALQCFGSVKEPDLVTWTSIIGAYA 441
R++H + IK G +I A+I+ Y+KCG + A + F + + D+V+W S+I A
Sbjct: 459 LGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIVSWNSMITRCA 518
Query: 442 FHGLSKESIEVFEKMLSHAVRPDSIAFLEVLSACSHGGLVSEGLRYFNLMISDYHILPDS 501
+I++F +M + D ++ LSAC++ S G MI + + D
Sbjct: 519 QSDNPSAAIDIFRQMGVSGICYDCVSISAALSACANLPSESFGKAIHGFMIK-HSLASDV 577
Query: 502 EHYTCLTDLLGRVGLLVEAYDLLASMPIEPRSDTLGAFIGACKVHGSI 549
+ L D+ + G L A ++ +M E + + I AC HG +
Sbjct: 578 YSESTLIDMYAKCGNLKAAMNVFKTMK-EKNIVSWNSIIAACGNHGKL 624
Score = 59.7 bits (143), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 91/208 (43%), Gaps = 6/208 (2%)
Query: 67 SQALKVSAKFGFLQQGKQLHSHIMKLGLCNKLSLQNQVLHVYVKCKAFDDMEKLFDEMRV 126
S AL A GK +H ++K L + + ++ ++ +Y KC +F M+
Sbjct: 546 SAALSACANLPSESFGKAIHGFMIKHSLASDVYSESTLIDMYAKCGNLKAAMNVFKTMKE 605
Query: 127 RNIVTWNTLISGIINCG--GNVTPYFRRMLLDN-VRLDHITFNSLLRACVQADDIEVGRR 183
+NIV+WN++I+ N G + F M+ + +R D ITF ++ +C D++ G R
Sbjct: 606 KNIVSWNSIIAACGNHGKLKDSLCLFHEMVEKSGIRPDQITFLEIISSCCHVGDVDEGVR 665
Query: 184 -LHSFILKVGFGLNCFVSSALVDLYGKCGFVEDARRVFDEV-LCRDLVLWNVMV-SCYAL 240
S G + +VDL+G+ G + +A + D +W ++ +C
Sbjct: 666 FFRSMTEDYGIQPQQEHYACVVDLFGRAGRLTEAYETVKSMPFPPDAGVWGTLLGACRLH 725
Query: 241 NCLGDGAIAVFNLMRLEGMKGDYFTFSS 268
+ +A LM L+ Y+ S
Sbjct: 726 KNVELAEVASSKLMDLDPSNSGYYVLIS 753
Score = 52.4 bits (124), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 57/111 (51%), Gaps = 2/111 (1%)
Query: 367 LASILSSCGSLSISCETRQVHAYAIKNGVQAFLSIENALINAYSKCGSIAGALQCFG--S 424
L+ +L +C + ++ + +QVHA+ I N + + ++ Y+ CGS + + F
Sbjct: 38 LSLLLQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGKMFYRLD 97
Query: 425 VKEPDLVTWTSIIGAYAFHGLSKESIEVFEKMLSHAVRPDSIAFLEVLSAC 475
++ + W SII ++ +GL +++ + KML V PD F ++ AC
Sbjct: 98 LRRSSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKAC 148
>sp|Q9SN39|PP320_ARATH Pentatricopeptide repeat-containing protein At4g18750,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H45 PE=2
SV=1
Length = 871
Score = 404 bits (1038), Expect = e-111, Method: Compositional matrix adjust.
Identities = 209/581 (35%), Positives = 331/581 (56%), Gaps = 6/581 (1%)
Query: 72 VSAKFGFLQQ---GKQLHSHIMKLGLCNKLSLQNQVLHVYVKCKAFDDMEKLFDEMRVRN 128
VS F L+ G+QLH I+K G + S+ N ++ Y+K + D K+FDEM R+
Sbjct: 201 VSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERD 260
Query: 129 IVTWNTLISGIINCG--GNVTPYFRRMLLDNVRLDHITFNSLLRACVQADDIEVGRRLHS 186
+++WN++I+G ++ G F +ML+ + +D T S+ C + I +GR +HS
Sbjct: 261 VISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHS 320
Query: 187 FILKVGFGLNCFVSSALVDLYGKCGFVEDARRVFDEVLCRDLVLWNVMVSCYALNCLGDG 246
+K F + L+D+Y KCG ++ A+ VF E+ R +V + M++ YA L
Sbjct: 321 IGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGE 380
Query: 247 AIAVFNLMRLEGMKGDYFTFSSLVNSCGTLGSSKLGRQIHGLVIKQSFDLDVLVATSLVD 306
A+ +F M EG+ D +T ++++N C G+++H + + D+ V+ +L+D
Sbjct: 381 AVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMD 440
Query: 307 MYAKNGNIDDACRVFDGMTAKNVVSWNTMVVGFGQNGDGREAVKLLRDMLQ-GSFCPDEV 365
MYAK G++ +A VF M K+++SWNT++ G+ +N EA+ L +L+ F PDE
Sbjct: 441 MYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDER 500
Query: 366 TLASILSSCGSLSISCETRQVHAYAIKNGVQAFLSIENALINAYSKCGSIAGALQCFGSV 425
T+A +L +C SLS + R++H Y ++NG + + N+L++ Y+KCG++ A F +
Sbjct: 501 TVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDI 560
Query: 426 KEPDLVTWTSIIGAYAFHGLSKESIEVFEKMLSHAVRPDSIAFLEVLSACSHGGLVSEGL 485
DLV+WT +I Y HG KE+I +F +M + D I+F+ +L ACSH GLV EG
Sbjct: 561 ASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGW 620
Query: 486 RYFNLMISDYHILPDSEHYTCLTDLLGRVGLLVEAYDLLASMPIEPRSDTLGAFIGACKV 545
R+FN+M + I P EHY C+ D+L R G L++AY + +MPI P + GA + C++
Sbjct: 621 RFFNIMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRI 680
Query: 546 HGSIGLAKWAAEKLLELEPSKPVNYALVSNVYASERCWFDVARLRKMMRDNCDHKVPGCS 605
H + LA+ AEK+ ELEP Y L++N+YA W V RLRK + K PGCS
Sbjct: 681 HHDVKLAEKVAEKVFELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCS 740
Query: 606 WIEIAGEIHTFVSSDRSHPQAVHMYAMLCTVFGLMEENNVS 646
WIEI G ++ FV+ D S+P+ ++ A L V M E S
Sbjct: 741 WIEIKGRVNIFVAGDSSNPETENIEAFLRKVRARMIEEGYS 781
Score = 219 bits (559), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 131/458 (28%), Positives = 237/458 (51%), Gaps = 4/458 (0%)
Query: 70 LKVSAKFGFLQQGKQLHSHIMKLGLCNKLSLQNQVLHVYVKCKAFDDMEKLFDEMRVRNI 129
L++ A L+ GK++ + I G +L +++ +Y C + ++FDE+++
Sbjct: 101 LQLCADSKSLKDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEVKIEKA 160
Query: 130 VTWNTLISGIINCG--GNVTPYFRRMLLDNVRLDHITFNSLLRACVQADDIEVGRRLHSF 187
+ WN L++ + G F++M+ V +D TF+ + ++ + G +LH F
Sbjct: 161 LFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGF 220
Query: 188 ILKVGFGLNCFVSSALVDLYGKCGFVEDARRVFDEVLCRDLVLWNVMVSCYALNCLGDGA 247
ILK GFG V ++LV Y K V+ AR+VFDE+ RD++ WN +++ Y N L +
Sbjct: 221 ILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKG 280
Query: 248 IAVFNLMRLEGMKGDYFTFSSLVNSCGTLGSSKLGRQIHGLVIKQSFDLDVLVATSLVDM 307
++VF M + G++ D T S+ C LGR +H + +K F + +L+DM
Sbjct: 281 LSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDM 340
Query: 308 YAKNGNIDDACRVFDGMTAKNVVSWNTMVVGFGQNGDGREAVKLLRDMLQGSFCPDEVTL 367
Y+K G++D A VF M+ ++VVS+ +M+ G+ + G EAVKL +M + PD T+
Sbjct: 341 YSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTV 400
Query: 368 ASILSSCGSLSISCETRQVHAYAIKNGVQAFLSIENALINAYSKCGSIAGALQCFGSVKE 427
++L+ C + E ++VH + +N + + + NAL++ Y+KCGS+ A F ++
Sbjct: 401 TAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRV 460
Query: 428 PDLVTWTSIIGAYAFHGLSKESIEVFEKMLSHA-VRPDSIAFLEVLSACSHGGLVSEGLR 486
D+++W +IIG Y+ + + E++ +F +L PD VL AC+ +G
Sbjct: 461 KDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGRE 520
Query: 487 YFNLMISDYHILPDSEHYTCLTDLLGRVGLLVEAYDLL 524
++ + + D L D+ + G L+ A+ L
Sbjct: 521 IHGYIMRNGY-FSDRHVANSLVDMYAKCGALLLAHMLF 557
Score = 187 bits (475), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 116/375 (30%), Positives = 194/375 (51%), Gaps = 9/375 (2%)
Query: 160 LDHITFNSLLRACVQADDIEVGRRLHSFILKVGFGLNCFVSSALVDLYGKCGFVEDARRV 219
+D T S+L+ C + ++ G+ + +FI GF ++ + S L +Y CG +++A RV
Sbjct: 92 IDPRTLCSVLQLCADSKSLKDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRV 151
Query: 220 FDEVLCRDLVLWNVMVSCYALNCLGDGAIAVFNLMRLEGMKGDYFTFSSLVNSCGTLGSS 279
FDEV + WN++++ A + G+I +F M G++ D +TFS + S +L S
Sbjct: 152 FDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSV 211
Query: 280 KLGRQIHGLVIKQSFDLDVLVATSLVDMYAKNGNIDDACRVFDGMTAKNVVSWNTMVVGF 339
G Q+HG ++K F V SLV Y KN +D A +VFD MT ++V+SWN+++ G+
Sbjct: 212 HGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGY 271
Query: 340 GQNGDGREAVKLLRDMLQGSFCPDEVTLASILSSCGSLSISCETRQVHAYAIKNGVQAFL 399
NG + + + ML D T+ S+ + C + R VH+ GV+A
Sbjct: 272 VSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSI----GVKACF 327
Query: 400 SIE----NALINAYSKCGSIAGALQCFGSVKEPDLVTWTSIIGAYAFHGLSKESIEVFEK 455
S E N L++ YSKCG + A F + + +V++TS+I YA GL+ E++++FE+
Sbjct: 328 SREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEE 387
Query: 456 MLSHAVRPDSIAFLEVLSACSHGGLVSEGLRYFNLMISDYHILPDSEHYTCLTDLLGRVG 515
M + PD VL+ C+ L+ EG R I + + D L D+ + G
Sbjct: 388 MEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHE-WIKENDLGFDIFVSNALMDMYAKCG 446
Query: 516 LLVEAYDLLASMPIE 530
+ EA + + M ++
Sbjct: 447 SMQEAELVFSEMRVK 461
Score = 54.3 bits (129), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 76/169 (44%), Gaps = 11/169 (6%)
Query: 316 DACRVFDGMTAKNVVSWNTMVVGFGQNGDGREAVKLLRDMLQGSFCPDEVTLASILSSCG 375
D+ FD ++V NT + F ++G+ AVKLL + G + D TL S+L C
Sbjct: 52 DSITTFD----RSVTDANTQLRRFCESGNLENAVKLL--CVSGKWDIDPRTLCSVLQLCA 105
Query: 376 SLSISCETRQVHAYAIKNGVQAFLSIENALINAYSKCGSIAGALQCFGSVKEPDLVTWTS 435
+ ++V + NG ++ + L Y+ CG + A + F VK + W
Sbjct: 106 DSKSLKDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEVKIEKALFWNI 165
Query: 436 IIGAYAFHGLSKESIEVFEKMLSHAVRPDSIAFLEVLSACS-----HGG 479
++ A G SI +F+KM+S V DS F V + S HGG
Sbjct: 166 LMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGG 214
>sp|Q9SIT7|PP151_ARATH Pentatricopeptide repeat-containing protein At2g13600
OS=Arabidopsis thaliana GN=PCMP-E76 PE=3 SV=1
Length = 697
Score = 404 bits (1037), Expect = e-111, Method: Compositional matrix adjust.
Identities = 224/655 (34%), Positives = 351/655 (53%), Gaps = 76/655 (11%)
Query: 83 KQLHSHIMKLGLCNKLSLQNQVLHVYVKCKAFDDMEKLFDEMRVRNIVTWNTLISGIINC 142
+ +H+ ++K G N++ +QN+++ Y KC + +D ++FD+M RNI TWN++++G+
Sbjct: 40 RYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKL 99
Query: 143 G---------------------------------GNVTPYFRRMLLDNVRLDHITFNSLL 169
G YF M + L+ +F S+L
Sbjct: 100 GFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVL 159
Query: 170 RACVQADDIEVGRRLHSFILKVGFGLNCFVSSALVDLYGKCGFVEDARRVFDEVLCRDLV 229
AC +D+ G ++HS I K F + ++ SALVD+Y KCG V DA+RVFDE+ R++V
Sbjct: 160 SACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVV 219
Query: 230 LWNVMVSCYALNCLGDGAIAVFNLMRLEGMKGDYFTFSSLVNSCGTLGSSKLGRQIHGLV 289
WN +++C+ N A+ VF +M ++ D T +S++++C +L + K+G+++HG V
Sbjct: 220 SWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRV 279
Query: 290 IKQ-SFDLDVLVATSLVDMYAKNGNIDDACRVFDGM------------------------ 324
+K D++++ + VDMYAK I +A +FD M
Sbjct: 280 VKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAA 339
Query: 325 -------TAKNVVSWNTMVVGFGQNGDGREAVKLLRDMLQGSFCPDEVTLASILSSCGSL 377
+NVVSWN ++ G+ QNG+ EA+ L + + S CP + A+IL +C L
Sbjct: 340 RLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACADL 399
Query: 378 SISCETRQVHAYAIKNGVQAFLSIE-------NALINAYSKCGSIAGALQCFGSVKEPDL 430
+ Q H + +K+G + F S E N+LI+ Y KCG + F + E D
Sbjct: 400 AELHLGMQAHVHVLKHGFK-FQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDC 458
Query: 431 VTWTSIIGAYAFHGLSKESIEVFEKMLSHAVRPDSIAFLEVLSACSHGGLVSEGLRYFNL 490
V+W ++I +A +G E++E+F +ML +PD I + VLSAC H G V EG YF+
Sbjct: 459 VSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHITMIGVLSACGHAGFVEEGRHYFSS 518
Query: 491 MISDYHILPDSEHYTCLTDLLGRVGLLVEAYDLLASMPIEPRSDTLGAFIGACKVHGSIG 550
M D+ + P +HYTC+ DLLGR G L EA ++ MP++P S G+ + ACKVH +I
Sbjct: 519 MTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEMPMQPDSVIWGSLLAACKVHRNIT 578
Query: 551 LAKWAAEKLLELEPSKPVNYALVSNVYASERCWFDVARLRKMMRDNCDHKVPGCSWIEIA 610
L K+ AEKLLE+EPS Y L+SN+YA W DV +RK MR K PGCSWI+I
Sbjct: 579 LGKYVAEKLLEVEPSNSGPYVLLSNMYAELGKWEDVMNVRKSMRKEGVTKQPGCSWIKIQ 638
Query: 611 GEIHTFVSSDRSHPQAVHMYAMLCTVFGLME-ENNVSGHCNVLDKEMDECT--LW 662
G H F+ D+SHP+ ++++L + M E + + ++ +EMD + LW
Sbjct: 639 GHDHVFMVKDKSHPRKKQIHSLLDILIAEMRPEQDHTEIGSLSSEEMDYSSNLLW 693
Score = 197 bits (500), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 124/422 (29%), Positives = 211/422 (50%), Gaps = 44/422 (10%)
Query: 66 YSQALKVSAKFGF--LQQGKQLHSHIMKLGLCNKLSLQNQVLHVYVKCKAFDDMEKLFDE 123
YS A +SA G + +G Q+HS I K + + + + ++ +Y KC +D +++FDE
Sbjct: 153 YSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDE 212
Query: 124 MRVRNIVTWNTLISGIINCGGNVTPY--FRRMLLDNVRLDHITFNSLLRACVQADDIEVG 181
M RN+V+WN+LI+ G V F+ ML V D +T S++ AC I+VG
Sbjct: 213 MGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVG 272
Query: 182 RRLHSFILKVGFGLN-CFVSSALVDLYGKCGFVEDARRVFD------------------- 221
+ +H ++K N +S+A VD+Y KC +++AR +FD
Sbjct: 273 QEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAM 332
Query: 222 ------------EVLCRDLVLWNVMVSCYALNCLGDGAIAVFNLMRLEGMKGDYFTFSSL 269
++ R++V WN +++ Y N + A+++F L++ E + +++F+++
Sbjct: 333 AASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANI 392
Query: 270 VNSCGTLGSSKLGRQIHGLVIKQSFDL------DVLVATSLVDMYAKNGNIDDACRVFDG 323
+ +C L LG Q H V+K F D+ V SL+DMY K G +++ VF
Sbjct: 393 LKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRK 452
Query: 324 MTAKNVVSWNTMVVGFGQNGDGREAVKLLRDMLQGSFCPDEVTLASILSSCGSLSISCET 383
M ++ VSWN M++GF QNG G EA++L R+ML+ PD +T+ +LS+CG E
Sbjct: 453 MMERDCVSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHITMIGVLSACGHAGFVEEG 512
Query: 384 RQVHAYAIKN-GVQAFLSIENALINAYSKCGSIAGALQCFGSVK-EPDLVTWTSIIGAYA 441
R + ++ GV +++ + G + A + +PD V W S++ A
Sbjct: 513 RHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEMPMQPDSVIWGSLLAACK 572
Query: 442 FH 443
H
Sbjct: 573 VH 574
Score = 128 bits (321), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 81/300 (27%), Positives = 144/300 (48%), Gaps = 32/300 (10%)
Query: 262 DYFTFSSLVNSC-GTLGSSKLGRQIHGLVIKQSFDLDVLVATSLVDMYAKNGNIDDACRV 320
D F+ L++SC + S+ R +H VIK F ++ + L+D Y+K G+++D +V
Sbjct: 18 DSSPFAKLLDSCIKSKLSAIYVRYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQV 77
Query: 321 FDGMTAKNVVSWNTMVVGFGQNGDGREAVKLLRDMLQGSFCP------------------ 362
FD M +N+ +WN++V G + G EA L R M + C
Sbjct: 78 FDKMPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEAL 137
Query: 363 -------------DEVTLASILSSCGSLSISCETRQVHAYAIKNGVQAFLSIENALINAY 409
+E + AS+LS+C L+ + QVH+ K+ + + I +AL++ Y
Sbjct: 138 CYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMY 197
Query: 410 SKCGSIAGALQCFGSVKEPDLVTWTSIIGAYAFHGLSKESIEVFEKMLSHAVRPDSIAFL 469
SKCG++ A + F + + ++V+W S+I + +G + E+++VF+ ML V PD +
Sbjct: 198 SKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLA 257
Query: 470 EVLSACSHGGLVSEGLRYFNLMISDYHILPDSEHYTCLTDLLGRVGLLVEAYDLLASMPI 529
V+SAC+ + G ++ + + D D+ + + EA + SMPI
Sbjct: 258 SVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPI 317
Score = 85.5 bits (210), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 110/231 (47%), Gaps = 14/231 (6%)
Query: 57 ESTHSAHSFYSQALKVSAKFGFLQQGKQLHSHIMKLGLC------NKLSLQNQVLHVYVK 110
ES H ++ LK A L G Q H H++K G + + + N ++ +YVK
Sbjct: 380 ESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVK 439
Query: 111 CKAFDDMEKLFDEMRVRNIVTWNTLISGIINCG-GN-VTPYFRRMLLDNVRLDHITFNSL 168
C ++ +F +M R+ V+WN +I G G GN FR ML + DHIT +
Sbjct: 440 CGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHITMIGV 499
Query: 169 LRACVQADDIEVGRRLHSFILKVGFGLNCFVS--SALVDLYGKCGFVEDARRVFDEV-LC 225
L AC A +E GR S + + FG+ + +VDL G+ GF+E+A+ + +E+ +
Sbjct: 500 LSACGHAGFVEEGRHYFSSMTR-DFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEMPMQ 558
Query: 226 RDLVLW-NVMVSCYALNCLGDGAIAVFNLMRLE-GMKGDYFTFSSLVNSCG 274
D V+W +++ +C + G L+ +E G Y S++ G
Sbjct: 559 PDSVIWGSLLAACKVHRNITLGKYVAEKLLEVEPSNSGPYVLLSNMYAELG 609
>sp|Q9ZUW3|PP172_ARATH Pentatricopeptide repeat-containing protein At2g27610
OS=Arabidopsis thaliana GN=PCMP-H60 PE=2 SV=1
Length = 868
Score = 383 bits (984), Expect = e-105, Method: Compositional matrix adjust.
Identities = 193/582 (33%), Positives = 340/582 (58%), Gaps = 8/582 (1%)
Query: 56 HESTHSAHSFYSQALKVSAKFGFLQQGKQLHSHIMKLGLCNKLSLQNQVLHVYVKCKAFD 115
+E T ++ AL V A+ G +G Q+H+ ++K GL + + N ++++Y+KC
Sbjct: 187 NEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVR 246
Query: 116 DMEKLFDEMRVRNIVTWNTLISGIINCGGNVTP--YFRRMLLDNVRLDHITFNSLLRACV 173
LFD+ V+++VTWN++ISG G ++ F M L+ VRL +F S+++ C
Sbjct: 247 KARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCA 306
Query: 174 QADDIEVGRRLHSFILKVGFGLNCFVSSALVDLYGKCGFVEDARRVFDEVLC-RDLVLWN 232
++ +LH ++K GF + + +AL+ Y KC + DA R+F E+ C ++V W
Sbjct: 307 NLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWT 366
Query: 233 VMVSCYALNCLGDGAIAVFNLMRLEGMKGDYFTFSSLVNSCGTLGSSKLGRQIHGLVIKQ 292
M+S + N + A+ +F+ M+ +G++ + FT+S ++ + + S ++H V+K
Sbjct: 367 AMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALPVISPS----EVHAQVVKT 422
Query: 293 SFDLDVLVATSLVDMYAKNGNIDDACRVFDGMTAKNVVSWNTMVVGFGQNGDGREAVKLL 352
+++ V T+L+D Y K G +++A +VF G+ K++V+W+ M+ G+ Q G+ A+K+
Sbjct: 423 NYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMF 482
Query: 353 RDMLQGSFCPDEVTLASILSSCGSLSISC-ETRQVHAYAIKNGVQAFLSIENALINAYSK 411
++ +G P+E T +SIL+ C + + S + +Q H +AIK+ + + L + +AL+ Y+K
Sbjct: 483 GELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAK 542
Query: 412 CGSIAGALQCFGSVKEPDLVTWTSIIGAYAFHGLSKESIEVFEKMLSHAVRPDSIAFLEV 471
G+I A + F +E DLV+W S+I YA HG + ++++VF++M V+ D + F+ V
Sbjct: 543 KGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDGVTFIGV 602
Query: 472 LSACSHGGLVSEGLRYFNLMISDYHILPDSEHYTCLTDLLGRVGLLVEAYDLLASMPIEP 531
+AC+H GLV EG +YF++M+ D I P EH +C+ DL R G L +A ++ +MP
Sbjct: 603 FAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVIENMPNPA 662
Query: 532 RSDTLGAFIGACKVHGSIGLAKWAAEKLLELEPSKPVNYALVSNVYASERCWFDVARLRK 591
S + AC+VH L + AAEK++ ++P Y L+SN+YA W + A++RK
Sbjct: 663 GSTIWRTILAACRVHKKTELGRLAAEKIIAMKPEDSAAYVLLSNMYAESGDWQERAKVRK 722
Query: 592 MMRDNCDHKVPGCSWIEIAGEIHTFVSSDRSHPQAVHMYAML 633
+M + K PG SWIE+ + ++F++ DRSHP +Y L
Sbjct: 723 LMNERNVKKEPGYSWIEVKNKTYSFLAGDRSHPLKDQIYMKL 764
Score = 230 bits (586), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 136/416 (32%), Positives = 222/416 (53%), Gaps = 7/416 (1%)
Query: 64 SFYSQALKVSAKFGFLQQGKQLHSHIMKLGLCNKLSLQNQVLHVYVKCKAFDDMEKLFDE 123
S +S LKVSA G+QLH +K G + +S+ ++ Y+K F D K+FDE
Sbjct: 94 SIFSSVLKVSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDE 153
Query: 124 MRVRNIVTWNTLISGIINCGGN--VTPYFRRMLLDNVRLDHITFNSLLRACVQADDIEVG 181
M+ RN+VTW TLISG N V F RM + + + TF + L + G
Sbjct: 154 MKERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRG 213
Query: 182 RRLHSFILKVGFGLNCFVSSALVDLYGKCGFVEDARRVFDEVLCRDLVLWNVMVSCYALN 241
++H+ ++K G VS++L++LY KCG V AR +FD+ + +V WN M+S YA N
Sbjct: 214 LQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAAN 273
Query: 242 CLGDGAIAVFNLMRLEGMKGDYFTFSSLVNSCGTLGSSKLGRQIHGLVIKQSFDLDVLVA 301
L A+ +F MRL ++ +F+S++ C L + Q+H V+K F D +
Sbjct: 274 GLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIR 333
Query: 302 TSLVDMYAKNGNIDDACRVFDGMT-AKNVVSWNTMVVGFGQNGDGREAVKLLRDMLQGSF 360
T+L+ Y+K + DA R+F + NVVSW M+ GF QN EAV L +M +
Sbjct: 334 TALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGV 393
Query: 361 CPDEVTLASILSSCGSLSISCETRQVHAYAIKNGVQAFLSIENALINAYSKCGSIAGALQ 420
P+E T + IL++ +S S +VHA +K + ++ AL++AY K G + A +
Sbjct: 394 RPNEFTYSVILTALPVISPS----EVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAK 449
Query: 421 CFGSVKEPDLVTWTSIIGAYAFHGLSKESIEVFEKMLSHAVRPDSIAFLEVLSACS 476
F + + D+V W++++ YA G ++ +I++F ++ ++P+ F +L+ C+
Sbjct: 450 VFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCA 505
Score = 180 bits (457), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 113/360 (31%), Positives = 192/360 (53%), Gaps = 7/360 (1%)
Query: 120 LFDEMRVRNIVTWNTLISGIINCGGNVTPYFRRMLLDNVRL----DHITFNSLLRACVQA 175
LFD+ R+ ++ +L+ G G T +R+ L+ RL D F+S+L+
Sbjct: 49 LFDKSPGRDRESYISLLFGFSRDGR--TQEAKRLFLNIHRLGMEMDCSIFSSVLKVSATL 106
Query: 176 DDIEVGRRLHSFILKVGFGLNCFVSSALVDLYGKCGFVEDARRVFDEVLCRDLVLWNVMV 235
D GR+LH +K GF + V ++LVD Y K +D R+VFDE+ R++V W ++
Sbjct: 107 CDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTTLI 166
Query: 236 SCYALNCLGDGAIAVFNLMRLEGMKGDYFTFSSLVNSCGTLGSSKLGRQIHGLVIKQSFD 295
S YA N + D + +F M+ EG + + FTF++ + G G Q+H +V+K D
Sbjct: 167 SGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLD 226
Query: 296 LDVLVATSLVDMYAKNGNIDDACRVFDGMTAKNVVSWNTMVVGFGQNGDGREAVKLLRDM 355
+ V+ SL+++Y K GN+ A +FD K+VV+WN+M+ G+ NG EA+ + M
Sbjct: 227 KTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSM 286
Query: 356 LQGSFCPDEVTLASILSSCGSLSISCETRQVHAYAIKNGVQAFLSIENALINAYSKCGSI 415
E + AS++ C +L T Q+H +K G +I AL+ AYSKC ++
Sbjct: 287 RLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAM 346
Query: 416 AGALQCFGSVK-EPDLVTWTSIIGAYAFHGLSKESIEVFEKMLSHAVRPDSIAFLEVLSA 474
AL+ F + ++V+WT++I + + +E++++F +M VRP+ + +L+A
Sbjct: 347 LDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTA 406
Score = 141 bits (355), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 88/264 (33%), Positives = 133/264 (50%), Gaps = 2/264 (0%)
Query: 215 DARRVFDEVLCRDLVLWNVMVSCYALNCLGDGAIAVF-NLMRLEGMKGDYFTFSSLVNSC 273
+A +FD+ RD + ++ ++ + A +F N+ RL GM+ D FSS++
Sbjct: 45 NAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRL-GMEMDCSIFSSVLKVS 103
Query: 274 GTLGSSKLGRQIHGLVIKQSFDLDVLVATSLVDMYAKNGNIDDACRVFDGMTAKNVVSWN 333
TL GRQ+H IK F DV V TSLVD Y K N D +VFD M +NVV+W
Sbjct: 104 ATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWT 163
Query: 334 TMVVGFGQNGDGREAVKLLRDMLQGSFCPDEVTLASILSSCGSLSISCETRQVHAYAIKN 393
T++ G+ +N E + L M P+ T A+ L + QVH +KN
Sbjct: 164 TLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKN 223
Query: 394 GVQAFLSIENALINAYSKCGSIAGALQCFGSVKEPDLVTWTSIIGAYAFHGLSKESIEVF 453
G+ + + N+LIN Y KCG++ A F + +VTW S+I YA +GL E++ +F
Sbjct: 224 GLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMF 283
Query: 454 EKMLSHAVRPDSIAFLEVLSACSH 477
M + VR +F V+ C++
Sbjct: 284 YSMRLNYVRLSESSFASVIKLCAN 307
Score = 78.2 bits (191), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 91/179 (50%)
Query: 316 DACRVFDGMTAKNVVSWNTMVVGFGQNGDGREAVKLLRDMLQGSFCPDEVTLASILSSCG 375
+A +FD ++ S+ +++ GF ++G +EA +L ++ + D +S+L
Sbjct: 45 NAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLKVSA 104
Query: 376 SLSISCETRQVHAYAIKNGVQAFLSIENALINAYSKCGSIAGALQCFGSVKEPDLVTWTS 435
+L RQ+H IK G +S+ +L++ Y K + + F +KE ++VTWT+
Sbjct: 105 TLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTT 164
Query: 436 IIGAYAFHGLSKESIEVFEKMLSHAVRPDSIAFLEVLSACSHGGLVSEGLRYFNLMISD 494
+I YA + ++ E + +F +M + +P+S F L + G+ GL+ +++ +
Sbjct: 165 LISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKN 223
>sp|Q7Y211|PP285_ARATH Pentatricopeptide repeat-containing protein At3g57430,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H81 PE=2
SV=2
Length = 890
Score = 382 bits (982), Expect = e-105, Method: Compositional matrix adjust.
Identities = 207/605 (34%), Positives = 338/605 (55%), Gaps = 19/605 (3%)
Query: 79 LQQGKQLHSHIMKLGLCNKLSLQNQVLHVYVKCKAFDDMEKLFDEMRVRNIVTWNTLISG 138
L GKQ+H++ ++ G N + N ++ +Y K + L R++VTWNT++S
Sbjct: 218 LMMGKQVHAYGLRKGELNSFII-NTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSS 276
Query: 139 IINCGG--NVTPYFRRMLLDNVRLDHITFNSLLRACVQADDIEVGRRLHSFILKVG-FGL 195
+ Y R M+L+ V D T +S+L AC + + G+ LH++ LK G
Sbjct: 277 LCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDE 336
Query: 196 NCFVSSALVDLYGKCGFVEDARRVFDEVLCRDLVLWNVMVSCYALNCLGDGAIAVF-NLM 254
N FV SALVD+Y C V RRVFD + R + LWN M++ Y+ N A+ +F +
Sbjct: 337 NSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGME 396
Query: 255 RLEGMKGDYFTFSSLVNSCGTLGSSKLGRQIHGLVIKQSFDLDVLVATSLVDMYAKNGNI 314
G+ + T + +V +C G+ IHG V+K+ D D V +L+DMY++ G I
Sbjct: 397 ESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKI 456
Query: 315 DDACRVFDGMTAKNVVSWNTMVVGFGQNGDGREAVKLLRDML-----------QGSFCPD 363
D A R+F M +++V+WNTM+ G+ + +A+ LL M + S P+
Sbjct: 457 DIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPN 516
Query: 364 EVTLASILSSCGSLSISCETRQVHAYAIKNGVQAFLSIENALINAYSKCGSIAGALQCFG 423
+TL +IL SC +LS + +++HAYAIKN + +++ +AL++ Y+KCG + + + F
Sbjct: 517 SITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFD 576
Query: 424 SVKEPDLVTWTSIIGAYAFHGLSKESIEVFEKMLSHAVRPDSIAFLEVLSACSHGGLVSE 483
+ + +++TW II AY HG +E+I++ M+ V+P+ + F+ V +ACSH G+V E
Sbjct: 577 QIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDE 636
Query: 484 GLRYFNLMISDYHILPDSEHYTCLTDLLGRVGLLVEAYDLLASMPIE-PRSDTLGAFIGA 542
GLR F +M DY + P S+HY C+ DLLGR G + EAY L+ MP + ++ + +GA
Sbjct: 637 GLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGA 696
Query: 543 CKVHGSIGLAKWAAEKLLELEPSKPVNYALVSNVYASERCWFDVARLRKMMRDNCDHKVP 602
++H ++ + + AA+ L++LEP+ +Y L++N+Y+S W +R+ M++ K P
Sbjct: 697 SRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSSAGLWDKATEVRRNMKEQGVRKEP 756
Query: 603 GCSWIEIAGEIHTFVSSDRSHPQAVHMYAMLCTVFGLMEENNV--SGHCNVLDKEMDECT 660
GCSWIE E+H FV+ D SHPQ+ + L T++ M + C + + E DE
Sbjct: 757 GCSWIEHGDEVHKFVAGDSSHPQSEKLSGYLETLWERMRKEGYVPDTSCVLHNVEEDEKE 816
Query: 661 LWLPG 665
+ L G
Sbjct: 817 ILLCG 821
Score = 213 bits (541), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 139/502 (27%), Positives = 253/502 (50%), Gaps = 22/502 (4%)
Query: 66 YSQALKVSAKFGFLQQGKQLHSHIMKLGL-CNKLSLQNQVLHVYVKCKAFDDMEKLFDEM 124
+ LK A ++ GKQ+H+H+ K G + +++ N ++++Y KC F + K+FD +
Sbjct: 100 FPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRI 159
Query: 125 RVRNIVTWNTLISGI--INCGGNVTPYFRRMLLDNVRLDHITFNSLLRACVQ---ADDIE 179
RN V+WN+LIS + FR ML +NV T S++ AC + +
Sbjct: 160 SERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLM 219
Query: 180 VGRRLHSFILKVGFGLNCFVSSALVDLYGKCGFVEDARRVFDEVLCRDLVLWNVMVSCYA 239
+G+++H++ L+ G LN F+ + LV +YGK G + ++ + RDLV WN ++S
Sbjct: 220 MGKQVHAYGLRKG-ELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLC 278
Query: 240 LNCLGDGAIAVFNLMRLEGMKGDYFTFSSLVNSCGTLGSSKLGRQIHGLVIKQ-SFDLDV 298
N A+ M LEG++ D FT SS++ +C L + G+++H +K S D +
Sbjct: 279 QNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENS 338
Query: 299 LVATSLVDMYAKNGNIDDACRVFDGMTAKNVVSWNTMVVGFGQNGDGREAVKLLRDMLQG 358
V ++LVDMY + RVFDGM + + WN M+ G+ QN +EA+ L M +
Sbjct: 339 FVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEES 398
Query: 359 S-FCPDEVTLASILSSCGSLSISCETRQVHAYAIKNGVQAFLSIENALINAYSKCGSIAG 417
+ + T+A ++ +C +H + +K G+ ++N L++ YS+ G I
Sbjct: 399 AGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDI 458
Query: 418 ALQCFGSVKEPDLVTWTSIIGAYAFHGLSKESIEVFEKMLSH-----------AVRPDSI 466
A++ FG +++ DLVTW ++I Y F ++++ + KM + +++P+SI
Sbjct: 459 AMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSI 518
Query: 467 AFLEVLSACSHGGLVSEGLRYFNLMISDYHILPDSEHYTCLTDLLGRVGLLVEAYDLLAS 526
+ +L +C+ +++G I + ++ D + L D+ + G L + +
Sbjct: 519 TLMTILPSCAALSALAKGKEIHAYAIKN-NLATDVAVGSALVDMYAKCGCLQMSRKVFDQ 577
Query: 527 MPIEPRSDTLGAFIGACKVHGS 548
+P + T I A +HG+
Sbjct: 578 IP-QKNVITWNVIIMAYGMHGN 598
Score = 167 bits (424), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 112/401 (27%), Positives = 199/401 (49%), Gaps = 30/401 (7%)
Query: 67 SQALKVSAKFGFLQQGKQLHSHIMKLGLCNKLSLQNQVL-HVYVKCKAFDDMEKLFDEMR 125
S L + L+ GK+LH++ +K G ++ S L +Y CK ++FD M
Sbjct: 306 SSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMF 365
Query: 126 VRNIVTWNTLISGIINCGGNVTPYFRRMLLDNVRLDH--------ITFNSLLRACVQADD 177
R I WN +I+G + + + LL + ++ T ++ ACV++
Sbjct: 366 DRKIGLWNAMIAGY-----SQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGA 420
Query: 178 IEVGRRLHSFILKVGFGLNCFVSSALVDLYGKCGFVEDARRVFDEVLCRDLVLWNVMVSC 237
+H F++K G + FV + L+D+Y + G ++ A R+F ++ RDLV WN M++
Sbjct: 421 FSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITG 480
Query: 238 YALNCLGDGAIAVFNLMR-LE----------GMKGDYFTFSSLVNSCGTLGSSKLGRQIH 286
Y + + A+ + + M+ LE +K + T +++ SC L + G++IH
Sbjct: 481 YVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIH 540
Query: 287 GLVIKQSFDLDVLVATSLVDMYAKNGNIDDACRVFDGMTAKNVVSWNTMVVGFGQNGDGR 346
IK + DV V ++LVDMYAK G + + +VFD + KNV++WN +++ +G +G+G+
Sbjct: 541 AYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQ 600
Query: 347 EAVKLLRDMLQGSFCPDEVTLASILSSCGSLSISCETRQVHAYAIKN--GVQAFLSIENA 404
EA+ LLR M+ P+EVT S+ ++C + E ++ Y +K GV+
Sbjct: 601 EAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIF-YVMKPDYGVEPSSDHYAC 659
Query: 405 LINAYSKCGSIAGALQCFGSVKEP--DLVTWTSIIGAYAFH 443
+++ + G I A Q + W+S++GA H
Sbjct: 660 VVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGASRIH 700
Score = 154 bits (389), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 94/336 (27%), Positives = 178/336 (52%), Gaps = 7/336 (2%)
Query: 153 MLLDNVRLDHITFNSLLRACVQADDIEVGRRLHSFILKVGFGLNCF-VSSALVDLYGKCG 211
M++ ++ D+ F +LL+A D+E+G+++H+ + K G+G++ V++ LV+LY KCG
Sbjct: 88 MIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCG 147
Query: 212 FVEDARRVFDEVLCRDLVLWNVMVSCYALNCLGDGAIAVFNLMRLEGMKGDYFTFSSLVN 271
+VFD + R+ V WN ++S + A+ F M E ++ FT S+V
Sbjct: 148 DFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVT 207
Query: 272 SCGTLGSSK---LGRQIHGLVIKQSFDLDVLVATSLVDMYAKNGNIDDACRVFDGMTAKN 328
+C L + +G+Q+H +++ +L+ + +LV MY K G + + + ++
Sbjct: 208 ACSNLPMPEGLMMGKQVHAYGLRKG-ELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRD 266
Query: 329 VVSWNTMVVGFGQNGDGREAVKLLRDMLQGSFCPDEVTLASILSSCGSLSISCETRQVHA 388
+V+WNT++ QN EA++ LR+M+ PDE T++S+L +C L + +++HA
Sbjct: 267 LVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHA 326
Query: 389 YAIKNG-VQAFLSIENALINAYSKCGSIAGALQCFGSVKEPDLVTWTSIIGAYAFHGLSK 447
YA+KNG + + +AL++ Y C + + F + + + W ++I Y+ + K
Sbjct: 327 YALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDK 386
Query: 448 ESIEVFEKMLSHA-VRPDSIAFLEVLSACSHGGLVS 482
E++ +F M A + +S V+ AC G S
Sbjct: 387 EALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFS 422
Score = 123 bits (308), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 77/249 (30%), Positives = 130/249 (52%), Gaps = 8/249 (3%)
Query: 241 NCLGDGAIAVFNLMRLEGMKGDYFTFSSLVNSCGTLGSSKLGRQIHGLVIKQSFDLD-VL 299
N L + + +++ L G+K D + F +L+ + L +LG+QIH V K + +D V
Sbjct: 76 NLLREAVLTYVDMIVL-GIKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVT 134
Query: 300 VATSLVDMYAKNGNIDDACRVFDGMTAKNVVSWNTMVVGFGQNGDGREAVKLLRDMLQGS 359
VA +LV++Y K G+ +VFD ++ +N VSWN+++ A++ R ML +
Sbjct: 135 VANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDEN 194
Query: 360 FCPDEVTLASILSSCGSLSIS---CETRQVHAYAIKNG-VQAFLSIENALINAYSKCGSI 415
P TL S++++C +L + +QVHAY ++ G + +F I N L+ Y K G +
Sbjct: 195 VEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGELNSF--IINTLVAMYGKLGKL 252
Query: 416 AGALQCFGSVKEPDLVTWTSIIGAYAFHGLSKESIEVFEKMLSHAVRPDSIAFLEVLSAC 475
A + GS DLVTW +++ + + E++E +M+ V PD VL AC
Sbjct: 253 ASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPAC 312
Query: 476 SHGGLVSEG 484
SH ++ G
Sbjct: 313 SHLEMLRTG 321
Score = 115 bits (287), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 81/332 (24%), Positives = 164/332 (49%), Gaps = 28/332 (8%)
Query: 77 GFLQQGKQLHSHIMKLGLCNKLSLQNQVLHVYVKCKAFDDMEKLFDEMRVRNIVTWNTLI 136
G + + +H ++K GL +QN ++ +Y + D ++F +M R++VTWNT+I
Sbjct: 419 GAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMI 478
Query: 137 SGII----------------NCGGNVTPYFRRMLLDNVRLDHITFNSLLRACVQADDIEV 180
+G + N V+ R+ +++ + IT ++L +C +
Sbjct: 479 TGYVFSEHHEDALLLLHKMQNLERKVSKGASRV---SLKPNSITLMTILPSCAALSALAK 535
Query: 181 GRRLHSFILKVGFGLNCFVSSALVDLYGKCGFVEDARRVFDEVLCRDLVLWNVMVSCYAL 240
G+ +H++ +K + V SALVD+Y KCG ++ +R+VFD++ ++++ WNV++ Y +
Sbjct: 536 GKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGM 595
Query: 241 NCLGDGAIAVFNLMRLEGMKGDYFTFSSLVNSCGTLGSSKLGRQIHGLVIKQSFDLDVLV 300
+ G AI + +M ++G+K + TF S+ +C G G +I V+K + ++
Sbjct: 596 HGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIF-YVMKPDYGVEPSS 654
Query: 301 --ATSLVDMYAKNGNIDDACRVFDGMTA--KNVVSWNTMVVGFGQNGDGREAVKLLRD-- 354
+VD+ + G I +A ++ + M +W+++ +G + + E ++
Sbjct: 655 DHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSL-LGASRIHNNLEIGEIAAQNL 713
Query: 355 -MLQGSFCPDEVTLASILSSCGSLSISCETRQ 385
L+ + V LA+I SS G + E R+
Sbjct: 714 IQLEPNVASHYVLLANIYSSAGLWDKATEVRR 745
Score = 79.3 bits (194), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 111/210 (52%), Gaps = 11/210 (5%)
Query: 74 AKFGFLQQGKQLHSHIMKLGLCNKLSLQNQVLHVYVKCKAFDDMEKLFDEMRVRNIVTWN 133
A L +GK++H++ +K L +++ + ++ +Y KC K+FD++ +N++TWN
Sbjct: 528 AALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWN 587
Query: 134 TLIS--GIINCGGNVTPYFRRMLLDNVRLDHITFNSLLRACVQADDIEVGRRLHSFILKV 191
+I G+ G R M++ V+ + +TF S+ AC + ++ G R+ +++K
Sbjct: 588 VIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIF-YVMKP 646
Query: 192 GFGLNCFVS--SALVDLYGKCGFVEDARRVFDEVLCRDLV---LWNVMVSCYAL-NCLGD 245
+G+ + +VDL G+ G +++A ++ + ++ RD W+ ++ + N L
Sbjct: 647 DYGVEPSSDHYACVVDLLGRAGRIKEAYQLMN-MMPRDFNKAGAWSSLLGASRIHNNLEI 705
Query: 246 GAIAVFNLMRLE-GMKGDYFTFSSLVNSCG 274
G IA NL++LE + Y +++ +S G
Sbjct: 706 GEIAAQNLIQLEPNVASHYVLLANIYSSAG 735
>sp|Q3E6Q1|PPR32_ARATH Pentatricopeptide repeat-containing protein At1g11290
OS=Arabidopsis thaliana GN=PCMP-H40 PE=2 SV=1
Length = 809
Score = 382 bits (981), Expect = e-105, Method: Compositional matrix adjust.
Identities = 195/570 (34%), Positives = 318/570 (55%), Gaps = 2/570 (0%)
Query: 66 YSQALKVSAKFGFLQQGKQLHSHIMKLGLCNKLSLQNQVLHVYVKCKAFDDMEKLFDEMR 125
++ LKV L+ GK++H ++K G L + ++Y KC+ ++ K+FD M
Sbjct: 138 FTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMP 197
Query: 126 VRNIVTWNTLISGIINCGGN--VTPYFRRMLLDNVRLDHITFNSLLRACVQADDIEVGRR 183
R++V+WNT+++G G + M +N++ IT S+L A I VG+
Sbjct: 198 ERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKE 257
Query: 184 LHSFILKVGFGLNCFVSSALVDLYGKCGFVEDARRVFDEVLCRDLVLWNVMVSCYALNCL 243
+H + ++ GF +S+ALVD+Y KCG +E AR++FD +L R++V WN M+ Y N
Sbjct: 258 IHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNEN 317
Query: 244 GDGAIAVFNLMRLEGMKGDYFTFSSLVNSCGTLGSSKLGRQIHGLVIKQSFDLDVLVATS 303
A+ +F M EG+K + +++C LG + GR IH L ++ D +V V S
Sbjct: 318 PKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNS 377
Query: 304 LVDMYAKNGNIDDACRVFDGMTAKNVVSWNTMVVGFGQNGDGREAVKLLRDMLQGSFCPD 363
L+ MY K +D A +F + ++ +VSWN M++GF QNG +A+ M + PD
Sbjct: 378 LISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPD 437
Query: 364 EVTLASILSSCGSLSISCETRQVHAYAIKNGVQAFLSIENALINAYSKCGSIAGALQCFG 423
T S++++ LSI+ + +H +++ + + + AL++ Y+KCG+I A F
Sbjct: 438 TFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFD 497
Query: 424 SVKEPDLVTWTSIIGAYAFHGLSKESIEVFEKMLSHAVRPDSIAFLEVLSACSHGGLVSE 483
+ E + TW ++I Y HG K ++E+FE+M ++P+ + FL V+SACSH GLV
Sbjct: 498 MMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEA 557
Query: 484 GLRYFNLMISDYHILPDSEHYTCLTDLLGRVGLLVEAYDLLASMPIEPRSDTLGAFIGAC 543
GL+ F +M +Y I +HY + DLLGR G L EA+D + MP++P + GA +GAC
Sbjct: 558 GLKCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGAC 617
Query: 544 KVHGSIGLAKWAAEKLLELEPSKPVNYALVSNVYASERCWFDVARLRKMMRDNCDHKVPG 603
++H ++ A+ AAE+L EL P + L++N+Y + W V ++R M K PG
Sbjct: 618 QIHKNVNFAEKAAERLFELNPDDGGYHVLLANIYRAASMWEKVGQVRVSMLRQGLRKTPG 677
Query: 604 CSWIEIAGEIHTFVSSDRSHPQAVHMYAML 633
CS +EI E+H+F S +HP + +YA L
Sbjct: 678 CSMVEIKNEVHSFFSGSTAHPDSKKIYAFL 707
Score = 234 bits (596), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 146/524 (27%), Positives = 272/524 (51%), Gaps = 11/524 (2%)
Query: 79 LQQGKQLHSHIMKLGLCNKLSLQNQVLHVYVKCKAFDDMEKLFDEMRVRNIVTWNTLISG 138
L++ +Q+ + K GL + Q +++ ++ + + D+ ++F+ + + V ++T++ G
Sbjct: 50 LKELRQILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKLNVLYHTMLKG 109
Query: 139 IINCGG--NVTPYFRRMLLDNVRLDHITFNSLLRACVQADDIEVGRRLHSFILKVGFGLN 196
+F RM D+V F LL+ C ++ VG+ +H ++K GF L+
Sbjct: 110 FAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLD 169
Query: 197 CFVSSALVDLYGKCGFVEDARRVFDEVLCRDLVLWNVMVSCYALNCLGDGAIAVFNLMRL 256
F + L ++Y KC V +AR+VFD + RDLV WN +V+ Y+ N + A+ + M
Sbjct: 170 LFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCE 229
Query: 257 EGMKGDYFTFSSLVNSCGTLGSSKLGRQIHGLVIKQSFDLDVLVATSLVDMYAKNGNIDD 316
E +K + T S++ + L +G++IHG ++ FD V ++T+LVDMYAK G+++
Sbjct: 230 ENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLET 289
Query: 317 ACRVFDGMTAKNVVSWNTMVVGFGQNGDGREAVKLLRDMLQGSFCPDEVTLASILSSCGS 376
A ++FDGM +NVVSWN+M+ + QN + +EA+ + + ML P +V++ L +C
Sbjct: 290 ARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACAD 349
Query: 377 LSISCETRQVHAYAIKNGVQAFLSIENALINAYSKCGSIAGALQCFGSVKEPDLVTWTSI 436
L R +H +++ G+ +S+ N+LI+ Y KC + A FG ++ LV+W ++
Sbjct: 350 LGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAM 409
Query: 437 IGAYAFHGLSKESIEVFEKMLSHAVRPDSIAFLEVLSACSHGGLVSEGLRYFNLMISDYH 496
I +A +G +++ F +M S V+PD+ ++ V++A + + ++ + ++
Sbjct: 410 ILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHA-KWIHGVVMRSC 468
Query: 497 ILPDSEHYTCLTDLLGRVGLLVEAYDLLASMPIEPRSDTLGAFIGACKVHGSIGLAKWAA 556
+ + T L D+ + G ++ A L+ M E T A I +G+ G K A
Sbjct: 469 LDKNVFVTTALVDMYAKCGAIMIA-RLIFDMMSERHVTTWNAMIDG---YGTHGFGKAAL 524
Query: 557 EKLLELEPS--KPVNYALVSNVYASERCWFDVARLR--KMMRDN 596
E E++ KP +S + A A L+ MM++N
Sbjct: 525 ELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKEN 568
>sp|Q9CAA8|PP108_ARATH Putative pentatricopeptide repeat-containing protein At1g68930
OS=Arabidopsis thaliana GN=PCMP-H22 PE=3 SV=1
Length = 743
Score = 382 bits (980), Expect = e-105, Method: Compositional matrix adjust.
Identities = 201/565 (35%), Positives = 308/565 (54%), Gaps = 33/565 (5%)
Query: 102 NQVLHVYVKCKAFDDMEKLFDEMRVRNIVTWNTLISGIINCG--GNVTPYFRRMLLD-NV 158
N +L Y K +ME F+++ R+ VTWN LI G G G + M+ D +
Sbjct: 76 NNLLLAYSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRDFSA 135
Query: 159 RLDHITFNSLLRACVQADDIEVGRRLHSFILKVGFGLNCFVSSALVDLYGKCGFVEDARR 218
L +T ++L+ + +G+++H ++K+GF V S L+ +Y G + DA++
Sbjct: 136 NLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKK 195
Query: 219 VFDEV------------------------------LCRDLVLWNVMVSCYALNCLGDGAI 248
VF + + +D V W M+ A N L AI
Sbjct: 196 VFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGMEKDSVSWAAMIKGLAQNGLAKEAI 255
Query: 249 AVFNLMRLEGMKGDYFTFSSLVNSCGTLGSSKLGRQIHGLVIKQSFDLDVLVATSLVDMY 308
F M+++G+K D + F S++ +CG LG+ G+QIH +I+ +F + V ++L+DMY
Sbjct: 256 ECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMY 315
Query: 309 AKNGNIDDACRVFDGMTAKNVVSWNTMVVGFGQNGDGREAVKLLRDMLQGSFCPDEVTLA 368
K + A VFD M KNVVSW MVVG+GQ G EAVK+ DM + PD TL
Sbjct: 316 CKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLG 375
Query: 369 SILSSCGSLSISCETRQVHAYAIKNGVQAFLSIENALINAYSKCGSIAGALQCFGSVKEP 428
+S+C ++S E Q H AI +G+ ++++ N+L+ Y KCG I + + F +
Sbjct: 376 QAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVR 435
Query: 429 DLVTWTSIIGAYAFHGLSKESIEVFEKMLSHAVRPDSIAFLEVLSACSHGGLVSEGLRYF 488
D V+WT+++ AYA G + E+I++F+KM+ H ++PD + V+SACS GLV +G RYF
Sbjct: 436 DAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYF 495
Query: 489 NLMISDYHILPDSEHYTCLTDLLGRVGLLVEAYDLLASMPIEPRSDTLGAFIGACKVHGS 548
LM S+Y I+P HY+C+ DL R G L EA + MP P + + AC+ G+
Sbjct: 496 KLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLSACRNKGN 555
Query: 549 IGLAKWAAEKLLELEPSKPVNYALVSNVYASERCWFDVARLRKMMRDNCDHKVPGCSWIE 608
+ + KWAAE L+EL+P P Y L+S++YAS+ W VA+LR+ MR+ K PG SWI+
Sbjct: 556 LEIGKWAAESLIELDPHHPAGYTLLSSIYASKGKWDSVAQLRRGMREKNVKKEPGQSWIK 615
Query: 609 IAGEIHTFVSSDRSHPQAVHMYAML 633
G++H+F + D S P +YA L
Sbjct: 616 WKGKLHSFSADDESSPYLDQIYAKL 640
Score = 192 bits (488), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 112/404 (27%), Positives = 197/404 (48%), Gaps = 34/404 (8%)
Query: 70 LKVSAKFGFLQQGKQLHSHIMKLGLCNKLSLQNQVLHVYVKCKAFDDMEKLFDEMRVRNI 129
LK+S+ G + GKQ+H ++KLG + L + + +L++Y D +K+F + RN
Sbjct: 146 LKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDDRNT 205
Query: 130 VTWNTLISGIINCG--------------------------------GNVTPYFRRMLLDN 157
V +N+L+ G++ CG FR M +
Sbjct: 206 VMYNSLMGGLLACGMIEDALQLFRGMEKDSVSWAAMIKGLAQNGLAKEAIECFREMKVQG 265
Query: 158 VRLDHITFNSLLRACVQADDIEVGRRLHSFILKVGFGLNCFVSSALVDLYGKCGFVEDAR 217
+++D F S+L AC I G+++H+ I++ F + +V SAL+D+Y KC + A+
Sbjct: 266 LKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAK 325
Query: 218 RVFDEVLCRDLVLWNVMVSCYALNCLGDGAIAVFNLMRLEGMKGDYFTFSSLVNSCGTLG 277
VFD + +++V W MV Y + A+ +F M+ G+ D++T +++C +
Sbjct: 326 TVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVS 385
Query: 278 SSKLGRQIHGLVIKQSFDLDVLVATSLVDMYAKNGNIDDACRVFDGMTAKNVVSWNTMVV 337
S + G Q HG I V V+ SLV +Y K G+IDD+ R+F+ M ++ VSW MV
Sbjct: 386 SLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAMVS 445
Query: 338 GFGQNGDGREAVKLLRDMLQGSFCPDEVTLASILSSCGSLS-ISCETRQVHAYAIKNGVQ 396
+ Q G E ++L M+Q PD VTL ++S+C + R + G+
Sbjct: 446 AYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFKLMTSEYGIV 505
Query: 397 AFLSIENALINAYSKCGSIAGALQCFGSVK-EPDLVTWTSIIGA 439
+ + +I+ +S+ G + A++ + PD + WT+++ A
Sbjct: 506 PSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLSA 549
Score = 159 bits (403), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 116/447 (25%), Positives = 198/447 (44%), Gaps = 68/447 (15%)
Query: 165 FNSLLRACVQADDIEVGRRLHSFILKVGFGLNCFVSSALVDLYGKCGFVEDARRVFDEVL 224
+N+++ A RR+ I + N F + L+ Y K G + + F+++
Sbjct: 44 YNNIVHAYALMKSSTYARRVFDRIPQP----NLFSWNNLLLAYSKAGLISEMESTFEKLP 99
Query: 225 CRDLVLWNVMVSCYALNCLGDGAIAVFN-LMRLEGMKGDYFTFSSLVNSCGTLGSSKLGR 283
RD V WNV++ Y+L+ L A+ +N +MR T +++ + G LG+
Sbjct: 100 DRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRDFSANLTRVTLMTMLKLSSSNGHVSLGK 159
Query: 284 QIHGLVIKQSFDLDVLVATSLVDMYAKNGNIDDACRVFDGMTAKNV-------------- 329
QIHG VIK F+ +LV + L+ MYA G I DA +VF G+ +N
Sbjct: 160 QIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDDRNTVMYNSLMGGLLACG 219
Query: 330 ----------------VSWNTMVVGFGQNGDGREAVKLLRDMLQGSFCPDEVTLASILSS 373
VSW M+ G QNG +EA++ R+M D+ S+L +
Sbjct: 220 MIEDALQLFRGMEKDSVSWAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQYPFGSVLPA 279
Query: 374 CGSLSISCETRQVHAYAIKNGVQAFLSIENALINAYSKCGSIAGALQCFGSVKEPDLVTW 433
CG L E +Q+HA I+ Q + + +ALI+ Y KC + A F +K+ ++V+W
Sbjct: 280 CGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVSW 339
Query: 434 TSIIGAYAFHGLSKESIEVFEKMLSHAVRPDSIAFLEVLSACS-----------HGGLVS 482
T+++ Y G ++E++++F M + PD + +SAC+ HG ++
Sbjct: 340 TAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQFHGKAIT 399
Query: 483 EGLRYF----NLMISDYHI---------------LPDSEHYTCLTDLLGRVGLLVEA--- 520
GL ++ N +++ Y + D+ +T + + G VE
Sbjct: 400 SGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAMVSAYAQFGRAVETIQL 459
Query: 521 YDLLASMPIEPRSDTLGAFIGACKVHG 547
+D + ++P TL I AC G
Sbjct: 460 FDKMVQHGLKPDGVTLTGVISACSRAG 486
Score = 132 bits (333), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 73/275 (26%), Positives = 138/275 (50%), Gaps = 4/275 (1%)
Query: 66 YSQALKVSAKFGFLQQGKQLHSHIMKLGLCNKLSLQNQVLHVYVKCKAFDDMEKLFDEMR 125
+ L G + +GKQ+H+ I++ + + + + ++ +Y KCK + +FD M+
Sbjct: 273 FGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMK 332
Query: 126 VRNIVTWNTLISGIINCG--GNVTPYFRRMLLDNVRLDHITFNSLLRACVQADDIEVGRR 183
+N+V+W ++ G G F M + DH T + AC +E G +
Sbjct: 333 QKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQ 392
Query: 184 LHSFILKVGFGLNCFVSSALVDLYGKCGFVEDARRVFDEVLCRDLVLWNVMVSCYALNCL 243
H + G VS++LV LYGKCG ++D+ R+F+E+ RD V W MVS YA
Sbjct: 393 FHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAMVSAYAQFGR 452
Query: 244 GDGAIAVFNLMRLEGMKGDYFTFSSLVNSCGTLGSSKLGRQIHGLVIKQSFDLDVLVATS 303
I +F+ M G+K D T + ++++C G + G++ L+ + + + S
Sbjct: 453 AVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFKLMTSEYGIVPSIGHYS 512
Query: 304 -LVDMYAKNGNIDDACRVFDGMT-AKNVVSWNTMV 336
++D+++++G +++A R +GM + + W T++
Sbjct: 513 CMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLL 547
Score = 83.2 bits (204), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 105/222 (47%), Gaps = 6/222 (2%)
Query: 63 HSFYSQALKVSAKFGFLQQGKQLHSHIMKLGLCNKLSLQNQVLHVYVKCKAFDDMEKLFD 122
H QA+ A L++G Q H + GL + +++ N ++ +Y KC DD +LF+
Sbjct: 371 HYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFN 430
Query: 123 EMRVRNIVTWNTLISGIINCGGNVTP--YFRRMLLDNVRLDHITFNSLLRACVQADDIEV 180
EM VR+ V+W ++S G V F +M+ ++ D +T ++ AC +A +E
Sbjct: 431 EMNVRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEK 490
Query: 181 GRRLHSFIL-KVGFGLNCFVSSALVDLYGKCGFVEDARRVFDEV-LCRDLVLWNVMVS-C 237
G+R + + G + S ++DL+ + G +E+A R + + D + W ++S C
Sbjct: 491 GQRYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLSAC 550
Query: 238 YALNCLGDGAIAVFNLMRLEG-MKGDYFTFSSLVNSCGTLGS 278
L G A +L+ L+ Y SS+ S G S
Sbjct: 551 RNKGNLEIGKWAAESLIELDPHHPAGYTLLSSIYASKGKWDS 592
Score = 75.1 bits (183), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 121/288 (42%), Gaps = 73/288 (25%)
Query: 266 FSSLVNSCGTLGS---SKLGRQIHGLVIKQSFDLDVLVATSLVDMYAKNGNIDDACRVFD 322
+S + C LG+ S+ + IHG +I+ + + ++V YA + A RVFD
Sbjct: 6 YSVQIKQCIGLGARNQSRYVKMIHGNIIRALPYPETFLYNNIVHAYALMKSSTYARRVFD 65
Query: 323 GMTAKNVVSWNTMVVGFGQNG---------------DG----------------REAVKL 351
+ N+ SWN +++ + + G DG AVK
Sbjct: 66 RIPQPNLFSWNNLLLAYSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKA 125
Query: 352 LRDMLQG-SFCPDEVTLASIL---SSCGSLSISCETRQVHAYAIKNGVQAFLSIENALIN 407
M++ S VTL ++L SS G +S+ +Q+H IK G +++L + + L+
Sbjct: 126 YNTMMRDFSANLTRVTLMTMLKLSSSNGHVSLG---KQIHGQVIKLGFESYLLVGSPLLY 182
Query: 408 AYSK-------------------------------CGSIAGALQCFGSVKEPDLVTWTSI 436
Y+ CG I ALQ F + E D V+W ++
Sbjct: 183 MYANVGCISDAKKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGM-EKDSVSWAAM 241
Query: 437 IGAYAFHGLSKESIEVFEKMLSHAVRPDSIAFLEVLSACSHGGLVSEG 484
I A +GL+KE+IE F +M ++ D F VL AC G ++EG
Sbjct: 242 IKGLAQNGLAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEG 289
Score = 46.2 bits (108), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 29/121 (23%), Positives = 58/121 (47%), Gaps = 4/121 (3%)
Query: 375 GSLSISCETRQVHAYAIKNGVQAFLSIENALINAYSKCGSIAGALQCFGSVKEPDLVTWT 434
G+ + S + +H I+ + N +++AY+ S A + F + +P+L +W
Sbjct: 17 GARNQSRYVKMIHGNIIRALPYPETFLYNNIVHAYALMKSSTYARRVFDRIPQPNLFSWN 76
Query: 435 SIIGAYAFHGLSKESIEVFEKMLSHAVRPDSIAFLEVLSACSHGGLVSEGLRYFNLMISD 494
+++ AY+ GL E FEK+ D + + ++ S GLV ++ +N M+ D
Sbjct: 77 NLLLAYSKAGLISEMESTFEKLPDR----DGVTWNVLIEGYSLSGLVGAAVKAYNTMMRD 132
Query: 495 Y 495
+
Sbjct: 133 F 133
>sp|Q9SVA5|PP357_ARATH Pentatricopeptide repeat-containing protein At4g39530
OS=Arabidopsis thaliana GN=PCMP-E52 PE=1 SV=1
Length = 834
Score = 376 bits (966), Expect = e-103, Method: Compositional matrix adjust.
Identities = 210/610 (34%), Positives = 342/610 (56%), Gaps = 11/610 (1%)
Query: 31 TTTITNAQKHDRSVLSSQLRNSGTIHESTHSAHSFYSQALKVSAKFGFLQQGKQLHSHIM 90
TT I+ K RS +S QL + ++ S L + FL+ GKQ+H+HI+
Sbjct: 218 TTMISGCVKMGRSYVSLQLFYQ-LMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHIL 276
Query: 91 KLGLCNKLSLQNQVLHVYVKCKAFDDMEKLFDEMRVRNIVTWNTLISGIINCG--GNVTP 148
+ GL SL N ++ YVKC KLF+ M +NI++W TL+SG
Sbjct: 277 RYGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAME 336
Query: 149 YFRRMLLDNVRLDHITFNSLLRACVQADDIEVGRRLHSFILKVGFGLNCFVSSALVDLYG 208
F M ++ D +S+L +C + G ++H++ +K G + +V+++L+D+Y
Sbjct: 337 LFTSMSKFGLKPDMYACSSILTSCASLHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYA 396
Query: 209 KCGFVEDARRVFDEVLCRDLVLWNVMVSCYALNCLGDG-----AIAVFNLMRLEGMKGDY 263
KC + DAR+VFD D+VL+N M+ Y+ LG A+ +F MR ++
Sbjct: 397 KCDCLTDARKVFDIFAAADVVLFNAMIEGYSR--LGTQWELHEALNIFRDMRFRLIRPSL 454
Query: 264 FTFSSLVNSCGTLGSSKLGRQIHGLVIKQSFDLDVLVATSLVDMYAKNGNIDDACRVFDG 323
TF SL+ + +L S L +QIHGL+ K +LD+ ++L+D+Y+ + D+ VFD
Sbjct: 455 LTFVSLLRASASLTSLGLSKQIHGLMFKYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDE 514
Query: 324 MTAKNVVSWNTMVVGFGQNGDGREAVKLLRDMLQGSFCPDEVTLASILSSCGSLSISCET 383
M K++V WN+M G+ Q + EA+ L ++ PDE T A+++++ G+L+
Sbjct: 515 MKVKDLVIWNSMFAGYVQQSENEEALNLFLELQLSRERPDEFTFANMVTAAGNLASVQLG 574
Query: 384 RQVHAYAIKNGVQAFLSIENALINAYSKCGSIAGALQCFGSVKEPDLVTWTSIIGAYAFH 443
++ H +K G++ I NAL++ Y+KCGS A + F S D+V W S+I +YA H
Sbjct: 575 QEFHCQLLKRGLECNPYITNALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSVISSYANH 634
Query: 444 GLSKESIEVFEKMLSHAVRPDSIAFLEVLSACSHGGLVSEGLRYFNLMISDYHILPDSEH 503
G K+++++ EKM+S + P+ I F+ VLSACSH GLV +GL+ F LM+ + I P++EH
Sbjct: 635 GEGKKALQMLEKMMSEGIEPNYITFVGVLSACSHAGLVEDGLKQFELMLR-FGIEPETEH 693
Query: 504 YTCLTDLLGRVGLLVEAYDLLASMPIEPRSDTLGAFIGACKVHGSIGLAKWAAEKLLELE 563
Y C+ LLGR G L +A +L+ MP +P + + + C G++ LA+ AAE + +
Sbjct: 694 YVCMVSLLGRAGRLNKARELIEKMPTKPAAIVWRSLLSGCAKAGNVELAEHAAEMAILSD 753
Query: 564 PSKPVNYALVSNVYASERCWFDVARLRKMMRDNCDHKVPGCSWIEIAGEIHTFVSSDRSH 623
P ++ ++SN+YAS+ W + ++R+ M+ K PG SWI I E+H F+S D+SH
Sbjct: 754 PKDSGSFTMLSNIYASKGMWTEAKKVRERMKVEGVVKEPGRSWIGINKEVHIFLSKDKSH 813
Query: 624 PQAVHMYAML 633
+A +Y +L
Sbjct: 814 CKANQIYEVL 823
Score = 182 bits (461), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 126/436 (28%), Positives = 220/436 (50%), Gaps = 26/436 (5%)
Query: 66 YSQALKVSAKFGFLQQGKQLHSHIMKLGLCNKLSLQNQVLHVYVKCKAFDDMEKLFDEMR 125
+++ L++ A L +H I+ GL L N ++++Y + K+F++M
Sbjct: 47 FARLLQLRASDDLLHYQNVVHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMP 106
Query: 126 VRNIVTWNTLIS-----GIINCGGNVTPYFRRMLLDNVRLDHITFNSLLRACVQADDIEV 180
RN+V+W+T++S GI V F R D+ + +S ++AC D
Sbjct: 107 ERNLVSWSTMVSACNHHGIYEESLVVFLEFWRTRKDSP--NEYILSSFIQACSGLDG--R 162
Query: 181 GR----RLHSFILKVGFGLNCFVSSALVDLYGKCGFVEDARRVFDEVLCRDLVLWNVMVS 236
GR +L SF++K GF + +V + L+D Y K G ++ AR VFD + + V W M+S
Sbjct: 163 GRWMVFQLQSFLVKSGFDRDVYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMIS 222
Query: 237 CYALNCLGDG----AIAVFNLMRLEGMKGDYFTFSSLVNSCGTLGSSKLGRQIHGLVIKQ 292
C+ G ++ +F + + + D + S+++++C L + G+QIH +++
Sbjct: 223 ----GCVKMGRSYVSLQLFYQLMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRY 278
Query: 293 SFDLDVLVATSLVDMYAKNGNIDDACRVFDGMTAKNVVSWNTMVVGFGQNGDGREAVKLL 352
++D + L+D Y K G + A ++F+GM KN++SW T++ G+ QN +EA++L
Sbjct: 279 GLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELF 338
Query: 353 RDMLQGSFCPDEVTLASILSSCGSLSISCETRQVHAYAIKNGVQAFLSIENALINAYSKC 412
M + PD +SIL+SC SL QVHAY IK + + N+LI+ Y+KC
Sbjct: 339 TSMSKFGLKPDMYACSSILTSCASLHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKC 398
Query: 413 GSIAGALQCFGSVKEPDLVTWTSIIGAYAFHGLS---KESIEVFEKMLSHAVRPDSIAFL 469
+ A + F D+V + ++I Y+ G E++ +F M +RP + F+
Sbjct: 399 DCLTDARKVFDIFAAADVVLFNAMIEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFV 458
Query: 470 EVLSACSHGGLVSEGL 485
+L A + L S GL
Sbjct: 459 SLLRASA--SLTSLGL 472
>sp|Q9LUJ2|PP249_ARATH Pentatricopeptide repeat-containing protein At3g22690
OS=Arabidopsis thaliana GN=PCMP-H56 PE=2 SV=1
Length = 842
Score = 376 bits (965), Expect = e-103, Method: Compositional matrix adjust.
Identities = 214/600 (35%), Positives = 328/600 (54%), Gaps = 35/600 (5%)
Query: 69 ALKVSAKFGFLQQGKQLHSHIMKLGLCNKLSLQNQVLHVYVKCKAFDDMEKLFDEMRVRN 128
L AK G Q+H I+K+G L +QN ++H Y +C D K+FDEM RN
Sbjct: 140 GLSACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERN 199
Query: 129 IVTWNTLISGIIN---CGGNVTPYFRRMLLDNVRLDHITFNSLLRACVQADDIEVGRRLH 185
+V+W ++I G V +FR + + V + +T ++ AC + +D+E G +++
Sbjct: 200 VVSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVY 259
Query: 186 SFILKVGFGLNCFVSSALVDLYGKCGFVEDARRVFDEVLCRDLVLWNVMVSCYALNCLGD 245
+FI G +N + SALVD+Y KC ++ A+R+FDE +L L N M S Y L
Sbjct: 260 AFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTR 319
Query: 246 GAIAVFNLMRLEGMKGDYFTFSSLVNSCGTLGSSKLGRQIHGLVIKQSFDLDVLVATSLV 305
A+ VFNLM G++ D + S ++SC L + G+ HG V++ F+ + +L+
Sbjct: 320 EALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALI 379
Query: 306 DMYAKNGNIDDACRVFDGMTAKNVVSWNTMVVGFGQNGDGREAVKLLRDM---------- 355
DMY K D A R+FD M+ K VV+WN++V G+ +NG+ A + M
Sbjct: 380 DMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNT 439
Query: 356 -----LQGS--------FC---------PDEVTLASILSSCGSLSISCETRQVHAYAIKN 393
+QGS FC D VT+ SI S+CG L + ++ Y KN
Sbjct: 440 IISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKN 499
Query: 394 GVQAFLSIENALINAYSKCGSIAGALQCFGSVKEPDLVTWTSIIGAYAFHGLSKESIEVF 453
G+Q + + L++ +S+CG A+ F S+ D+ WT+ IGA A G ++ +IE+F
Sbjct: 500 GIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELF 559
Query: 454 EKMLSHAVRPDSIAFLEVLSACSHGGLVSEGLRYFNLMISDYHILPDSEHYTCLTDLLGR 513
+ M+ ++PD +AF+ L+ACSHGGLV +G F M+ + + P+ HY C+ DLLGR
Sbjct: 560 DDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGR 619
Query: 514 VGLLVEAYDLLASMPIEPRSDTLGAFIGACKVHGSIGLAKWAAEKLLELEPSKPVNYALV 573
GLL EA L+ MP+EP + + AC+V G++ +A +AAEK+ L P + +Y L+
Sbjct: 620 AGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLL 679
Query: 574 SNVYASERCWFDVARLRKMMRDNCDHKVPGCSWIEIAGEIHTFVSSDRSHPQAVHMYAML 633
SNVYAS W D+A++R M++ K PG S I+I G+ H F S D SHP+ ++ AML
Sbjct: 680 SNVYASAGRWNDMAKVRLSMKEKGLRKPPGTSSIQIRGKTHEFTSGDESHPEMPNIEAML 739
Score = 179 bits (453), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 136/503 (27%), Positives = 229/503 (45%), Gaps = 31/503 (6%)
Query: 21 YLTPALYQNQTTT---ITNAQKHDRSVLSSQLRNSGTIHESTHSAHSFYSQALKVSAKFG 77
+L+P + TTT + N K ++ SS L+N TI E S Q L
Sbjct: 9 HLSPMVLATTTTTKPSLLNQSKCTKATPSS-LKNCKTIDELKMFHRSLTKQGLDND---- 63
Query: 78 FLQQGKQLHSHIMKLGLCNKLSLQNQVLHVYVKCKAFDDMEKLFDEMRVRNIVTWNTLIS 137
+ +L + +LG LS +V F++ E +N+LI
Sbjct: 64 -VSTITKLVARSCELGTRESLSFAKEV---------FENSESY------GTCFMYNSLIR 107
Query: 138 GIINCG--GNVTPYFRRMLLDNVRLDHITFNSLLRACVQADDIEVGRRLHSFILKVGFGL 195
G + G F RM+ + D TF L AC ++ G ++H I+K+G+
Sbjct: 108 GYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIVKMGYAK 167
Query: 196 NCFVSSALVDLYGKCGFVEDARRVFDEVLCRDLVLWNVMVSCYALNCLGDGAIAV-FNLM 254
+ FV ++LV Y +CG ++ AR+VFDE+ R++V W M+ YA A+ + F ++
Sbjct: 168 DLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMV 227
Query: 255 RLEGMKGDYFTFSSLVNSCGTLGSSKLGRQIHGLVIKQSFDLDVLVATSLVDMYAKNGNI 314
R E + + T ++++C L + G +++ + +++ L+ ++LVDMY K I
Sbjct: 228 RDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAI 287
Query: 315 DDACRVFDGMTAKNVVSWNTMVVGFGQNGDGREAVKLLRDMLQGSFCPDEVTLASILSSC 374
D A R+FD A N+ N M + + G REA+ + M+ PD +++ S +SSC
Sbjct: 288 DVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSC 347
Query: 375 GSLSISCETRQVHAYAIKNGVQAFLSIENALINAYSKCGSIAGALQCFGSVKEPDLVTWT 434
L + H Y ++NG +++ +I NALI+ Y KC A + F + +VTW
Sbjct: 348 SQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWN 407
Query: 435 SIIGAYAFHGLSKESIEVFEKMLSHAVRPDSIAFLEVLSACSHGGLVSEGLRYFNLMISD 494
SI+ Y +G + E FE M + +++ ++S G L E + F M S
Sbjct: 408 SIVAGYVENGEVDAAWETFETMPEKNI----VSWNTIISGLVQGSLFEEAIEVFCSMQSQ 463
Query: 495 YHILPDSEHYTCLTDLLGRVGLL 517
+ D + G +G L
Sbjct: 464 EGVNADGVTMMSIASACGHLGAL 486
>sp|Q9SVP7|PP307_ARATH Pentatricopeptide repeat-containing protein At4g13650
OS=Arabidopsis thaliana GN=PCMP-H42 PE=2 SV=2
Length = 1064
Score = 368 bits (945), Expect = e-101, Method: Compositional matrix adjust.
Identities = 189/558 (33%), Positives = 311/558 (55%), Gaps = 4/558 (0%)
Query: 77 GFLQQGKQLHSHIMKLGLCNKLSLQNQVLHVYVKCKAFDDMEKLFDEMRVRNIVTWNTLI 136
G L +G+QLH++ KLG + ++ +L++Y KC + F E V N+V WN ++
Sbjct: 403 GTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVML 462
Query: 137 --SGIINCGGNVTPYFRRMLLDNVRLDHITFNSLLRACVQADDIEVGRRLHSFILKVGFG 194
G+++ N FR+M ++ + + T+ S+L+ C++ D+E+G ++HS I+K F
Sbjct: 463 VAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQ 522
Query: 195 LNCFVSSALVDLYGKCGFVEDARRVFDEVLCRDLVLWNVMVSCYALNCLGDGAIAVFNLM 254
LN +V S L+D+Y K G ++ A + +D+V W M++ Y D A+ F M
Sbjct: 523 LNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQM 582
Query: 255 RLEGMKGDYFTFSSLVNSCGTLGSSKLGRQIHGLVIKQSFDLDVLVATSLVDMYAKNGNI 314
G++ D ++ V++C L + K G+QIH F D+ +LV +Y++ G I
Sbjct: 583 LDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKI 642
Query: 315 DDACRVFDGMTAKNVVSWNTMVVGFGQNGDGREAVKLLRDMLQGSFCPDEVTLASILSSC 374
+++ F+ A + ++WN +V GF Q+G+ EA+++ M + + T S + +
Sbjct: 643 EESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAA 702
Query: 375 GSLSISCETRQVHAYAIKNGVQAFLSIENALINAYSKCGSIAGALQCFGSVKEPDLVTWT 434
+ + +QVHA K G + + NALI+ Y+KCGSI+ A + F V + V+W
Sbjct: 703 SETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWN 762
Query: 435 SIIGAYAFHGLSKESIEVFEKMLSHAVRPDSIAFLEVLSACSHGGLVSEGLRYFNLMISD 494
+II AY+ HG E+++ F++M+ VRP+ + + VLSACSH GLV +G+ YF M S+
Sbjct: 763 AIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSE 822
Query: 495 YHILPDSEHYTCLTDLLGRVGLLVEAYDLLASMPIEPRSDTLGAFIGACKVHGSIGLAKW 554
Y + P EHY C+ D+L R GLL A + + MPI+P + + AC VH ++ + ++
Sbjct: 823 YGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLLSACVVHKNMEIGEF 882
Query: 555 AAEKLLELEPSKPVNYALVSNVYASERCWFDVARLRKMMRDNCDHKVPGCSWIEIAGEIH 614
AA LLELEP Y L+SN+YA + W R+ M++ K PG SWIE+ IH
Sbjct: 883 AAHHLLELEPEDSATYVLLSNLYAVSKKWDARDLTRQKMKEKGVKKEPGQSWIEVKNSIH 942
Query: 615 TFVSSDRSHPQA--VHMY 630
+F D++HP A +H Y
Sbjct: 943 SFYVGDQNHPLADEIHEY 960
Score = 242 bits (617), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 148/486 (30%), Positives = 242/486 (49%), Gaps = 8/486 (1%)
Query: 66 YSQALKVSAKFGFLQQGKQLHSHIMKLGLCNKLSLQNQVLHVYVKCKAFDDMEKLFDEMR 125
+S L K L+ G+QLH ++KLG + + N ++ +Y E +F M
Sbjct: 291 FSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMS 350
Query: 126 VRNIVTWNTLISGIINC--GGNVTPYFRRMLLDNVRLDHITFNSLLRACVQADDIEVGRR 183
R+ VT+NTLI+G+ C G F+RM LD + D T SL+ AC + G++
Sbjct: 351 QRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQ 410
Query: 184 LHSFILKVGFGLNCFVSSALVDLYGKCGFVEDARRVFDEVLCRDLVLWNVMVSCYALNCL 243
LH++ K+GF N + AL++LY KC +E A F E ++VLWNVM+ Y L
Sbjct: 411 LHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDD 470
Query: 244 GDGAIAVFNLMRLEGMKGDYFTFSSLVNSCGTLGSSKLGRQIHGLVIKQSFDLDVLVATS 303
+ +F M++E + + +T+ S++ +C LG +LG QIH +IK +F L+ V +
Sbjct: 471 LRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSV 530
Query: 304 LVDMYAKNGNIDDACRVFDGMTAKNVVSWNTMVVGFGQNGDGREAVKLLRDMLQGSFCPD 363
L+DMYAK G +D A + K+VVSW TM+ G+ Q +A+ R ML D
Sbjct: 531 LIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSD 590
Query: 364 EVTLASILSSCGSLSISCETRQVHAYAIKNGVQAFLSIENALINAYSKCGSIAGALQCFG 423
EV L + +S+C L E +Q+HA A +G + L +NAL+ YS+CG I + F
Sbjct: 591 EVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFE 650
Query: 424 SVKEPDLVTWTSIIGAYAFHGLSKESIEVFEKMLSHAVRPDSIAFLEVLSACSHGGLVSE 483
+ D + W +++ + G ++E++ VF +M + ++ F + A S + +
Sbjct: 651 QTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQ 710
Query: 484 GLRYFNLMISDYHILPDSEHYTC--LTDLLGRVGLLVEAYDLLASMPIEPRSDTLGAFIG 541
G + ++ + DSE C L + + G + +A + + + A I
Sbjct: 711 GKQVHAVITKTGY---DSETEVCNALISMYAKCGSISDAEKQFLEVSTKNEV-SWNAIIN 766
Query: 542 ACKVHG 547
A HG
Sbjct: 767 AYSKHG 772
Score = 226 bits (577), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 147/453 (32%), Positives = 234/453 (51%), Gaps = 8/453 (1%)
Query: 77 GFLQQGKQLHSHIMKLGLCNKLSLQNQVLHVYVKCKAFDDMEKLFDEMRVRNIVTWNTLI 136
G L +G++LHS I+KLGL + L ++ Y+ K+FDEM R I TWN +I
Sbjct: 99 GSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAFKVFDEMPERTIFTWNKMI 158
Query: 137 SGII--NCGGNVTPYFRRMLLDNVRLDHITFNSLLRACVQAD-DIEVGRRLHSFILKVGF 193
+ N G V F RM+ +NV + TF+ +L AC +V ++H+ IL G
Sbjct: 159 KELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGSVAFDVVEQIHARILYQGL 218
Query: 194 GLNCFVSSALVDLYGKCGFVEDARRVFDEVLCRDLVLWNVMVSCYALNCLGDGAIAVFNL 253
+ V + L+DLY + GFV+ ARRVFD + +D W M+S + N AI +F
Sbjct: 219 RDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCD 278
Query: 254 MRLEGMKGDYFTFSSLVNSCGTLGSSKLGRQIHGLVIKQSFDLDVLVATSLVDMYAKNGN 313
M + G+ + FSS++++C + S ++G Q+HGLV+K F D V +LV +Y GN
Sbjct: 279 MYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGN 338
Query: 314 IDDACRVFDGMTAKNVVSWNTMVVGFGQNGDGREAVKLLRDMLQGSFCPDEVTLASILSS 373
+ A +F M+ ++ V++NT++ G Q G G +A++L + M PD TLAS++ +
Sbjct: 339 LISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVA 398
Query: 374 CGSLSISCETRQVHAYAIKNGVQAFLSIENALINAYSKCGSIAGALQCFGSVKEPDLVTW 433
C + +Q+HAY K G + IE AL+N Y+KC I AL F + ++V W
Sbjct: 399 CSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLW 458
Query: 434 TSIIGAYAFHGLSKESIEVFEKMLSHAVRPDSIAFLEVLSACSHGGLVSEGLRYFNLMIS 493
++ AY + S +F +M + P+ + +L C G + G + + +I
Sbjct: 459 NVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIK 518
Query: 494 DYHILPDSEHYTC--LTDLLGRVGLLVEAYDLL 524
L Y C L D+ ++G L A+D+L
Sbjct: 519 TNFQL---NAYVCSVLIDMYAKLGKLDTAWDIL 548
Score = 110 bits (274), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 86/327 (26%), Positives = 148/327 (45%), Gaps = 35/327 (10%)
Query: 258 GMKGDYFTFSSLVNSC-GTLGSSKLGRQIHGLVIKQSFDLDVLVATSLVDMYAKNGNIDD 316
G++ ++ T L+ C T GS GR++H ++K D + ++ L D Y G++
Sbjct: 79 GIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYG 138
Query: 317 ACRVFDGMTAKNVVSWNTMVVGFGQNGDGREAVKLLRDMLQGSFCPDEVTLASILSSCGS 376
A +VFD M + + +WN M+ E L M+ + P+E T + +L +C
Sbjct: 139 AFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRG 198
Query: 377 LSISCE-TRQVHAYAIKNGVQAFLSIENALINAYSKCGSIAGALQCFGSVKEPDLVTWTS 435
S++ + Q+HA + G++ + N LI+ YS+ G + A + F ++ D +W +
Sbjct: 199 GSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVA 258
Query: 436 IIGAYAFHGLSKESIEVFEKMLSHAVRPDSIAFLEVLSACS-----------HGGLVSEG 484
+I + + E+I +F M + P AF VLSAC HG ++ G
Sbjct: 259 MISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLG 318
Query: 485 LR------------YFNL--MISDYHILP-----DSEHYTCLTDLLGRVGLLVEAYDLLA 525
YF+L +IS HI D+ Y L + L + G +A +L
Sbjct: 319 FSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFK 378
Query: 526 SM---PIEPRSDTLGAFIGACKVHGSI 549
M +EP S+TL + + AC G++
Sbjct: 379 RMHLDGLEPDSNTLASLVVACSADGTL 405
Score = 77.4 bits (189), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 103/225 (45%), Gaps = 6/225 (2%)
Query: 66 YSQALKVSAKFGFLQQGKQLHSHIMKLGLCNKLSLQNQVLHVYVKCKAFDDMEKLFDEMR 125
+ A+K +++ ++QGKQ+H+ I K G ++ + N ++ +Y KC + D EK F E+
Sbjct: 695 FGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVS 754
Query: 126 VRNIVTWNTLISGIIN--CGGNVTPYFRRMLLDNVRLDHITFNSLLRACVQADDIEVG-R 182
+N V+WN +I+ G F +M+ NVR +H+T +L AC ++ G
Sbjct: 755 TKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIA 814
Query: 183 RLHSFILKVGFGLNCFVSSALVDLYGKCGFVEDARRVFDEVLCR-DLVLWNVMVS-CYAL 240
S + G +VD+ + G + A+ E+ + D ++W ++S C
Sbjct: 815 YFESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLLSACVVH 874
Query: 241 NCLGDGAIAVFNLMRLEGM-KGDYFTFSSLVNSCGTLGSSKLGRQ 284
+ G A +L+ LE Y S+L + L RQ
Sbjct: 875 KNMEIGEFAAHHLLELEPEDSATYVLLSNLYAVSKKWDARDLTRQ 919
>sp|Q5G1T1|PP272_ARATH Pentatricopeptide repeat-containing protein At3g49170,
chloroplastic OS=Arabidopsis thaliana GN=EMB2261 PE=2
SV=1
Length = 850
Score = 367 bits (941), Expect = e-100, Method: Compositional matrix adjust.
Identities = 196/577 (33%), Positives = 333/577 (57%), Gaps = 11/577 (1%)
Query: 66 YSQALKVSAKFGFLQQGKQLHSHIMKLG-LCNKLSLQNQVLHVYVKCK-AFDDMEKLFDE 123
Y+ ++ + F+ G+ +MK G + + + ++ ++VK + +F++ K+FD+
Sbjct: 169 YTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDK 228
Query: 124 MRVRNIVTWNTLISGIINCG--GNVTPYFRRMLLDNVRLDHITFNSLLRACVQADDIEVG 181
M N+VTW +I+ + G +F M+L D T +S+ AC + +++ +G
Sbjct: 229 MSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLG 288
Query: 182 RRLHSFILKVGFGLNCFVSSALVDLYGKC---GFVEDARRVFDEVLCRDLVLWNVMVSCY 238
++LHS+ ++ G + V +LVD+Y KC G V+D R+VFD + ++ W +++ Y
Sbjct: 289 KQLHSWAIRSGLVDD--VECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGY 346
Query: 239 ALNC-LGDGAIAVFNLMRLEG-MKGDYFTFSSLVNSCGTLGSSKLGRQIHGLVIKQSFDL 296
NC L AI +F+ M +G ++ ++FTFSS +CG L ++G+Q+ G K+
Sbjct: 347 MKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLAS 406
Query: 297 DVLVATSLVDMYAKNGNIDDACRVFDGMTAKNVVSWNTMVVGFGQNGDGREAVKLLRDML 356
+ VA S++ M+ K+ ++DA R F+ ++ KN+VS+NT + G +N + +A KLL ++
Sbjct: 407 NSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEIT 466
Query: 357 QGSFCPDEVTLASILSSCGSLSISCETRQVHAYAIKNGVQAFLSIENALINAYSKCGSIA 416
+ T AS+LS ++ + Q+H+ +K G+ + NALI+ YSKCGSI
Sbjct: 467 ERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSID 526
Query: 417 GALQCFGSVKEPDLVTWTSIIGAYAFHGLSKESIEVFEKMLSHAVRPDSIAFLEVLSACS 476
A + F ++ ++++WTS+I +A HG + +E F +M+ V+P+ + ++ +LSACS
Sbjct: 527 TASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACS 586
Query: 477 HGGLVSEGLRYFNLMISDYHILPDSEHYTCLTDLLGRVGLLVEAYDLLASMPIEPRSDTL 536
H GLVSEG R+FN M D+ I P EHY C+ DLL R GLL +A++ + +MP +
Sbjct: 587 HVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFINTMPFQADVLVW 646
Query: 537 GAFIGACKVHGSIGLAKWAAEKLLELEPSKPVNYALVSNVYASERCWFDVARLRKMMRDN 596
F+GAC+VH + L K AA K+LEL+P++P Y +SN+YA W + +R+ M++
Sbjct: 647 RTFLGACRVHSNTELGKLAARKILELDPNEPAAYIQLSNIYACAGKWEESTEMRRKMKER 706
Query: 597 CDHKVPGCSWIEIAGEIHTFVSSDRSHPQAVHMYAML 633
K GCSWIE+ +IH F D +HP A +Y L
Sbjct: 707 NLVKEGGCSWIEVGDKIHKFYVGDTAHPNAHQIYDEL 743
Score = 168 bits (425), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 102/336 (30%), Positives = 187/336 (55%), Gaps = 13/336 (3%)
Query: 153 MLLDNVR-LDHITFNSLLRACVQADDIEVGRRLHSFILKVGFGLNCFVSSALVDLYGKCG 211
M D +R +D +TF+SLL++C++A D +G+ +H+ +++ + + ++L+ LY K G
Sbjct: 52 MARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSG 111
Query: 212 FVEDARRVFDEVL---CRDLVLWNVMVSCYALNCLGDGAIAVFNLMRLEGMKGDYFTFSS 268
A VF+ + RD+V W+ M++CY N AI VF G+ + + +++
Sbjct: 112 DSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTA 171
Query: 269 LVNSCGTLGSSKLGRQIHGLVIKQS-FDLDVLVATSLVDMYAKNGN-IDDACRVFDGMTA 326
++ +C +GR G ++K F+ DV V SL+DM+ K N ++A +VFD M+
Sbjct: 172 VIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSE 231
Query: 327 KNVVSWNTMVVGFGQNGDGREAVKLLRDMLQGSFCPDEVTLASILSSCGSLSISCETRQV 386
NVV+W M+ Q G REA++ DM+ F D+ TL+S+ S+C L +Q+
Sbjct: 232 LNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQL 291
Query: 387 HAYAIKNGVQAFLSIENALINAYSKC---GSIAGALQCFGSVKEPDLVTWTSIIGAYAFH 443
H++AI++G+ +E +L++ Y+KC GS+ + F +++ +++WT++I Y +
Sbjct: 292 HSWAIRSGLVD--DVECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKN 349
Query: 444 -GLSKESIEVFEKMLSHA-VRPDSIAFLEVLSACSH 477
L+ E+I +F +M++ V P+ F AC +
Sbjct: 350 CNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGN 385
Score = 109 bits (272), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 82/332 (24%), Positives = 154/332 (46%), Gaps = 12/332 (3%)
Query: 63 HSFYSQALKVSAKFGFLQQGKQLHSHIMKLGLCNKLSLQNQVLHVYVKCKAFDDMEKLFD 122
H +S A K + GKQ+ K GL + S+ N V+ ++VK +D ++ F+
Sbjct: 373 HFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFE 432
Query: 123 EMRVRNIVTWNTLISGIINCGGNVTPYFRRMLLDNVR---LDHITFNSLLRACVQADDIE 179
+ +N+V++NT + G N F+ + R + TF SLL I
Sbjct: 433 SLSEKNLVSYNTFLDGTCR-NLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIR 491
Query: 180 VGRRLHSFILKVGFGLNCFVSSALVDLYGKCGFVEDARRVFDEVLCRDLVLWNVMVSCYA 239
G ++HS ++K+G N V +AL+ +Y KCG ++ A RVF+ + R+++ W M++ +A
Sbjct: 492 KGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFA 551
Query: 240 LNCLGDGAIAVFNLMRLEGMKGDYFTFSSLVNSCGTLGSSKLG-RQIHGLVIKQSFDLDV 298
+ + FN M EG+K + T+ +++++C +G G R + + +
Sbjct: 552 KHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKM 611
Query: 299 LVATSLVDMYAKNGNIDDACRVFDGMTAK-NVVSWNTMVVGFGQNGDGREAVKLLRDMLQ 357
+VD+ + G + DA + M + +V+ W T + + + R +L+
Sbjct: 612 EHYACMVDLLCRAGLLTDAFEFINTMPFQADVLVWRTFLGACRVHSNTELGKLAARKILE 671
Query: 358 GSFCPDE----VTLASILSSCGSLSISCETRQ 385
P+E + L++I + G S E R+
Sbjct: 672 --LDPNEPAAYIQLSNIYACAGKWEESTEMRR 701
Score = 66.2 bits (160), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 79/162 (48%), Gaps = 4/162 (2%)
Query: 343 GDGREAVKLLRDMLQGSFCP-DEVTLASILSSCGSLSISCETRQVHAYAIKNGVQAFLSI 401
GD R AV L M + P D VT +S+L SC + VHA I+ ++ +
Sbjct: 40 GDLRGAVSALDLMARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVL 99
Query: 402 ENALINAYSKCGSIAGALQCFGSVK---EPDLVTWTSIIGAYAFHGLSKESIEVFEKMLS 458
N+LI+ YSK G A A F +++ + D+V+W++++ Y +G ++I+VF + L
Sbjct: 100 YNSLISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLE 159
Query: 459 HAVRPDSIAFLEVLSACSHGGLVSEGLRYFNLMISDYHILPD 500
+ P+ + V+ ACS+ V G ++ H D
Sbjct: 160 LGLVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESD 201
>sp|P0C898|PP232_ARATH Putative pentatricopeptide repeat-containing protein At3g15130
OS=Arabidopsis thaliana GN=PCMP-H86 PE=3 SV=1
Length = 689
Score = 363 bits (931), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 190/562 (33%), Positives = 315/562 (56%), Gaps = 8/562 (1%)
Query: 70 LKVSAKFGFLQQGKQLHSHIMKLGLCNKLSLQNQVLHVYVKCKAFDDMEKLFDEMRVRNI 129
L+V + G QG Q+H +++K G L N ++ +Y KC+ K+FD M RN+
Sbjct: 13 LRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSMPERNV 72
Query: 130 VTWNTLISGIINCG---GNVTPYFRRMLLDNVRLDHITFNSLLRACVQADDIEVGRRLHS 186
V+W+ L+SG + G G+++ F M + + TF++ L+AC + +E G ++H
Sbjct: 73 VSWSALMSGHVLNGDLKGSLS-LFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQIHG 131
Query: 187 FILKVGFGLNCFVSSALVDLYGKCGFVEDARRVFDEVLCRDLVLWNVMVSCYALNCLGDG 246
F LK+GF + V ++LVD+Y KCG + +A +VF ++ R L+ WN M++ + G
Sbjct: 132 FCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHAGYGSK 191
Query: 247 AIAVFNLMRLEGMK--GDYFTFSSLVNSCGTLGSSKLGRQIHGLVIKQSFDL--DVLVAT 302
A+ F +M+ +K D FT +SL+ +C + G G+QIHG +++ F +
Sbjct: 192 ALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITG 251
Query: 303 SLVDMYAKNGNIDDACRVFDGMTAKNVVSWNTMVVGFGQNGDGREAVKLLRDMLQGSFCP 362
SLVD+Y K G + A + FD + K ++SW+++++G+ Q G+ EA+ L + + + +
Sbjct: 252 SLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQELNSQI 311
Query: 363 DEVTLASILSSCGSLSISCETRQVHAYAIKNGVQAFLSIENALINAYSKCGSIAGALQCF 422
D L+SI+ ++ + +Q+ A A+K S+ N++++ Y KCG + A +CF
Sbjct: 312 DSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETSVLNSVVDMYLKCGLVDEAEKCF 371
Query: 423 GSVKEPDLVTWTSIIGAYAFHGLSKESIEVFEKMLSHAVRPDSIAFLEVLSACSHGGLVS 482
++ D+++WT +I Y HGL K+S+ +F +ML H + PD + +L VLSACSH G++
Sbjct: 372 AEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSACSHSGMIK 431
Query: 483 EGLRYFNLMISDYHILPDSEHYTCLTDLLGRVGLLVEAYDLLASMPIEPRSDTLGAFIGA 542
EG F+ ++ + I P EHY C+ DLLGR G L EA L+ +MPI+P +
Sbjct: 432 EGEELFSKLLETHGIKPRVEHYACVVDLLGRAGRLKEAKHLIDTMPIKPNVGIWQTLLSL 491
Query: 543 CKVHGSIGLAKWAAEKLLELEPSKPVNYALVSNVYASERCWFDVARLRKMMRDNCDHKVP 602
C+VHG I L K + LL ++ P NY ++SN+Y W + R++ K
Sbjct: 492 CRVHGDIELGKEVGKILLRIDAKNPANYVMMSNLYGQAGYWNEQGNARELGNIKGLKKEA 551
Query: 603 GCSWIEIAGEIHTFVSSDRSHP 624
G SW+EI E+H F S + SHP
Sbjct: 552 GMSWVEIEREVHFFRSGEDSHP 573
Score = 195 bits (496), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 127/427 (29%), Positives = 222/427 (51%), Gaps = 24/427 (5%)
Query: 167 SLLRACVQADDIEVGRRLHSFILKVGFGLNCFVSSALVDLYGKCGFVEDARRVFDEVLCR 226
S+LR C + + G ++H ++LK G GLN S+ L+D+Y KC A +VFD + R
Sbjct: 11 SILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSMPER 70
Query: 227 DLVLWNVMVSCYALNCLGDGAIAVFNLMRLEGMKGDYFTFSSLVNSCGTLGSSKLGRQIH 286
++V W+ ++S + LN G++++F+ M +G+ + FTFS+ + +CG L + + G QIH
Sbjct: 71 NVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQIH 130
Query: 287 GLVIKQSFDLDVLVATSLVDMYAKNGNIDDACRVFDGMTAKNVVSWNTMVVGFGQNGDGR 346
G +K F++ V V SLVDMY+K G I++A +VF + ++++SWN M+ GF G G
Sbjct: 131 GFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHAGYGS 190
Query: 347 EAVKLLRDMLQGSFC--PDEVTLASILSSCGSLSISCETRQVHAYAIKNGVQ--AFLSIE 402
+A+ M + + PDE TL S+L +C S + +Q+H + +++G + +I
Sbjct: 191 KALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATIT 250
Query: 403 NALINAYSKCGSIAGALQCFGSVKEPDLVTWTSIIGAYAFHGLSKESIEVFEKMLSHAVR 462
+L++ Y KCG + A + F +KE +++W+S+I YA G E++ +F+++ +
Sbjct: 251 GSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQELNSQ 310
Query: 463 PDSIAFLEVLSACSHGGLVSEGLRYFNLMISDYHILPDSEHYTCLT---DLLGRVGLLVE 519
DS A ++ + L+ +G + L + LP + L D+ + GL+ E
Sbjct: 311 IDSFALSSIIGVFADFALLRQGKQMQALAVK----LPSGLETSVLNSVVDMYLKCGLVDE 366
Query: 520 AYDLLASMPIEPRSDTLGAFIGACKVHGSIGLAKWAAEKLLELEPSKPVNYALVSNVYAS 579
A A M ++ G +G GL K + E+ L N+
Sbjct: 367 AEKCFAEMQLKDVISWTVVITG----YGKHGLGKKSVRIFYEM---------LRHNIEPD 413
Query: 580 ERCWFDV 586
E C+ V
Sbjct: 414 EVCYLAV 420
Score = 181 bits (460), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 103/387 (26%), Positives = 206/387 (53%), Gaps = 8/387 (2%)
Query: 66 YSQALKVSAKFGFLQQGKQLHSHIMKLGLCNKLSLQNQVLHVYVKCKAFDDMEKLFDEMR 125
+S LK L++G Q+H +K+G + + N ++ +Y KC ++ EK+F +
Sbjct: 110 FSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIV 169
Query: 126 VRNIVTWNTLISGIINC--GGNVTPYFRRMLLDNV--RLDHITFNSLLRACVQADDIEVG 181
R++++WN +I+G ++ G F M N+ R D T SLL+AC I G
Sbjct: 170 DRSLISWNAMIAGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAG 229
Query: 182 RRLHSFILKVGFGL--NCFVSSALVDLYGKCGFVEDARRVFDEVLCRDLVLWNVMVSCYA 239
+++H F+++ GF + ++ +LVDLY KCG++ AR+ FD++ + ++ W+ ++ YA
Sbjct: 230 KQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYA 289
Query: 240 LNCLGDGAIAVFNLMRLEGMKGDYFTFSSLVNSCGTLGSSKLGRQIHGLVIKQSFDLDVL 299
A+ +F ++ + D F SS++ + G+Q+ L +K L+
Sbjct: 290 QEGEFVEAMGLFKRLQELNSQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETS 349
Query: 300 VATSLVDMYAKNGNIDDACRVFDGMTAKNVVSWNTMVVGFGQNGDGREAVKLLRDMLQGS 359
V S+VDMY K G +D+A + F M K+V+SW ++ G+G++G G+++V++ +ML+ +
Sbjct: 350 VLNSVVDMYLKCGLVDEAEKCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEMLRHN 409
Query: 360 FCPDEVTLASILSSCGSLSISCETRQVHAYAIK-NGVQAFLSIENALINAYSKCGSIAGA 418
PDEV ++LS+C + E ++ + ++ +G++ + +++ + G + A
Sbjct: 410 IEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETHGIKPRVEHYACVVDLLGRAGRLKEA 469
Query: 419 LQCFGSVK-EPDLVTWTSIIGAYAFHG 444
++ +P++ W +++ HG
Sbjct: 470 KHLIDTMPIKPNVGIWQTLLSLCRVHG 496
Score = 64.3 bits (155), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 61/121 (50%)
Query: 366 TLASILSSCGSLSISCETRQVHAYAIKNGVQAFLSIENALINAYSKCGSIAGALQCFGSV 425
L SIL C +S + QVH Y +K+G L N LI+ Y KC A + F S+
Sbjct: 8 NLVSILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSM 67
Query: 426 KEPDLVTWTSIIGAYAFHGLSKESIEVFEKMLSHAVRPDSIAFLEVLSACSHGGLVSEGL 485
E ++V+W++++ + +G K S+ +F +M + P+ F L AC + +GL
Sbjct: 68 PERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGL 127
Query: 486 R 486
+
Sbjct: 128 Q 128
>sp|Q9SS83|PP220_ARATH Pentatricopeptide repeat-containing protein At3g09040, mitochondrial
OS=Arabidopsis thaliana GN=PCMP-E88 PE=2 SV=1
Length = 1028
Score = 362 bits (929), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 196/574 (34%), Positives = 319/574 (55%), Gaps = 10/574 (1%)
Query: 79 LQQGKQLHSHIMKLGLCNKLSLQNQVLHVYVKCKAFDDMEKLFDEMRVRNIVTWNTLISG 138
L+ G Q HS I+K L L + N ++ +Y KC A +D ++F+ M R+ VTWNT+I
Sbjct: 444 LEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGS 503
Query: 139 IINCGGNVTPY--FRRMLLDNVRLDHITFNSLLRACVQADDIEVGRRLHSFILKVGFGLN 196
+ + F+RM L + D S L+AC + G+++H +K G +
Sbjct: 504 YVQDENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQVHCLSVKCGLDRD 563
Query: 197 CFVSSALVDLYGKCGFVEDARRVFDEVLCRDLVLWNVMVSCYALNCLGDGAIAVFNLMRL 256
S+L+D+Y KCG ++DAR+VF + +V N +++ Y+ N L + A+ +F M
Sbjct: 564 LHTGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMNALIAGYSQNNLEE-AVVLFQEMLT 622
Query: 257 EGMKGDYFTFSSLVNSCGTLGSSKLGRQIHGLVIKQSFDLD-VLVATSLVDMYAKNGNID 315
G+ TF+++V +C S LG Q HG + K+ F + + SL+ MY + +
Sbjct: 623 RGVNPSEITFATIVEACHKPESLTLGTQFHGQITKRGFSSEGEYLGISLLGMYMNSRGMT 682
Query: 316 DACRVFDGMTA-KNVVSWNTMVVGFGQNGDGREAVKLLRDMLQGSFCPDEVTLASILSSC 374
+AC +F +++ K++V W M+ G QNG EA+K ++M PD+ T ++L C
Sbjct: 683 EACALFSELSSPKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGVLPDQATFVTVLRVC 742
Query: 375 GSLSISCETRQVHA--YAIKNGVQAFLSIENALINAYSKCGSIAGALQCFGSVKE-PDLV 431
LS E R +H+ + + + + S N LI+ Y+KCG + G+ Q F ++ ++V
Sbjct: 743 SVLSSLREGRAIHSLIFHLAHDLDELTS--NTLIDMYAKCGDMKGSSQVFDEMRRRSNVV 800
Query: 432 TWTSIIGAYAFHGLSKESIEVFEKMLSHAVRPDSIAFLEVLSACSHGGLVSEGLRYFNLM 491
+W S+I YA +G +++++++F+ M + PD I FL VL+ACSH G VS+G + F +M
Sbjct: 801 SWNSLINGYAKNGYAEDALKIFDSMRQSHIMPDEITFLGVLTACSHAGKVSDGRKIFEMM 860
Query: 492 ISDYHILPDSEHYTCLTDLLGRVGLLVEAYDLLASMPIEPRSDTLGAFIGACKVHGSIGL 551
I Y I +H C+ DLLGR G L EA D + + ++P + + +GAC++HG
Sbjct: 861 IGQYGIEARVDHVACMVDLLGRWGYLQEADDFIEAQNLKPDARLWSSLLGACRIHGDDIR 920
Query: 552 AKWAAEKLLELEPSKPVNYALVSNVYASERCWFDVARLRKMMRDNCDHKVPGCSWIEIAG 611
+ +AEKL+ELEP Y L+SN+YAS+ CW LRK+MRD KVPG SWI++
Sbjct: 921 GEISAEKLIELEPQNSSAYVLLSNIYASQGCWEKANALRKVMRDRGVKKVPGYSWIDVEQ 980
Query: 612 EIHTFVSSDRSHPQAVHMYAMLCTVFGLMEENNV 645
H F + D+SH + + L ++ LM+++ V
Sbjct: 981 RTHIFAAGDKSHSEIGKIEMFLEDLYDLMKDDAV 1014
Score = 221 bits (564), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 142/466 (30%), Positives = 231/466 (49%), Gaps = 14/466 (3%)
Query: 58 STHSAHSFYSQALKVSAKFGFLQQGKQLHSHIMKLGLCNKLSLQNQVLHVYVKCKAFDDM 117
S S S L L G +H+ +KLGL + + + + ++ +Y KC+ +
Sbjct: 322 SVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAA 381
Query: 118 EKLFDEMRVRNIVTWNTLISGIINCGGN--VTPYFRRMLLDNVRLDHITFNSLLRACVQA 175
K+F+ + +N V WN +I G + G + V F M +D TF SLL C +
Sbjct: 382 AKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAAS 441
Query: 176 DDIEVGRRLHSFILKVGFGLNCFVSSALVDLYGKCGFVEDARRVFDEVLCRDLVLWNVMV 235
D+E+G + HS I+K N FV +ALVD+Y KCG +EDAR++F+ + RD V WN ++
Sbjct: 442 HDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERMCDRDNVTWNTII 501
Query: 236 SCYALNCLGDGAIAVFNLMRLEGMKGDYFTFSSLVNSCGTLGSSKLGRQIHGLVIKQSFD 295
Y + A +F M L G+ D +S + +C + G+Q+H L +K D
Sbjct: 502 GSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQVHCLSVKCGLD 561
Query: 296 LDVLVATSLVDMYAKNGNIDDACRVFDGMTAKNVVSWNTMVVGFGQNGDGREAVKLLRDM 355
D+ +SL+DMY+K G I DA +VF + +VVS N ++ G+ QN + EAV L ++M
Sbjct: 562 RDLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMNALIAGYSQN-NLEEAVVLFQEM 620
Query: 356 LQGSFCPDEVTLASILSSCGSLSISCETRQVHAYAIKNGVQA---FLSIENALINAYSKC 412
L P E+T A+I+ +C Q H K G + +L I +L+ Y
Sbjct: 621 LTRGVNPSEITFATIVEACHKPESLTLGTQFHGQITKRGFSSEGEYLGI--SLLGMYMNS 678
Query: 413 GSIAGALQCFGSVKEP-DLVTWTSIIGAYAFHGLSKESIEVFEKMLSHAVRPDSIAFLEV 471
+ A F + P +V WT ++ ++ +G +E+++ +++M V PD F+ V
Sbjct: 679 RGMTEACALFSELSSPKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGVLPDQATFVTV 738
Query: 472 LSACSHGGLVSEGLRYFNLMISDYHILPDSEHYT--CLTDLLGRVG 515
L CS + EG +L+ +H+ D + T L D+ + G
Sbjct: 739 LRVCSVLSSLREGRAIHSLI---FHLAHDLDELTSNTLIDMYAKCG 781
Score = 211 bits (536), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 120/374 (32%), Positives = 204/374 (54%), Gaps = 3/374 (0%)
Query: 104 VLHVYVKCKAFDDMEKLFDEMRVRNIVTWNTLISG--IINCGGNVTPYFRRMLLDNVRLD 161
V++ Y++ D LF EM ++V WN +ISG C YF M +V+
Sbjct: 267 VINTYIRLGKLKDARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKST 326
Query: 162 HITFNSLLRACVQADDIEVGRRLHSFILKVGFGLNCFVSSALVDLYGKCGFVEDARRVFD 221
T S+L A ++++G +H+ +K+G N +V S+LV +Y KC +E A +VF+
Sbjct: 327 RSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFE 386
Query: 222 EVLCRDLVLWNVMVSCYALNCLGDGAIAVFNLMRLEGMKGDYFTFSSLVNSCGTLGSSKL 281
+ ++ V WN M+ YA N + +F M+ G D FTF+SL+++C ++
Sbjct: 387 ALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEM 446
Query: 282 GRQIHGLVIKQSFDLDVLVATSLVDMYAKNGNIDDACRVFDGMTAKNVVSWNTMVVGFGQ 341
G Q H ++IK+ ++ V +LVDMYAK G ++DA ++F+ M ++ V+WNT++ + Q
Sbjct: 447 GSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQ 506
Query: 342 NGDGREAVKLLRDMLQGSFCPDEVTLASILSSCGSLSISCETRQVHAYAIKNGVQAFLSI 401
+ + EA L + M D LAS L +C + + +QVH ++K G+ L
Sbjct: 507 DENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLHT 566
Query: 402 ENALINAYSKCGSIAGALQCFGSVKEPDLVTWTSIIGAYAFHGLSKESIEVFEKMLSHAV 461
++LI+ YSKCG I A + F S+ E +V+ ++I Y+ + L +E++ +F++ML+ V
Sbjct: 567 GSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMNALIAGYSQNNL-EEAVVLFQEMLTRGV 625
Query: 462 RPDSIAFLEVLSAC 475
P I F ++ AC
Sbjct: 626 NPSEITFATIVEAC 639
Score = 191 bits (485), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 124/451 (27%), Positives = 222/451 (49%), Gaps = 39/451 (8%)
Query: 79 LQQGKQLHSHIMKLGLCNKLSLQNQVLHVYVKCKAFDDMEKLFDEMRVRNIVTWNTLISG 138
L+ GK +HS + LG+ ++ L N ++ +Y KC EK FD + +++ WN+++S
Sbjct: 76 LRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFDFLE-KDVTAWNSMLSM 134
Query: 139 IINCG--GNVTPYFRRMLLDNVRLDHITFNSLLRACVQADDIEVGRRLHSFILKVGFGLN 196
+ G G V F + + + + TF+ +L C + ++E GR++H ++K+G N
Sbjct: 135 YSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLERN 194
Query: 197 CFVSSALVDLYGKCGFVEDARRVFDEVLCRDLVLWNVMVSCYALNCLGDGAIAVFNLMRL 256
+ ALVD+Y KC + DARRVF+ ++ + V W + S Y L + A+ VF MR
Sbjct: 195 SYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRD 254
Query: 257 EGMKGDYFTFSSLVNSCGTLGSSKLGRQIHGLVIKQSFDLDVLVATSLVDMYAKNGNIDD 316
EG + D+ F +++N+ Y + G + D
Sbjct: 255 EGHRPDHLAFVTVINT-----------------------------------YIRLGKLKD 279
Query: 317 ACRVFDGMTAKNVVSWNTMVVGFGQNGDGREAVKLLRDMLQGSFCPDEVTLASILSSCGS 376
A +F M++ +VV+WN M+ G G+ G A++ +M + S TL S+LS+ G
Sbjct: 280 ARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGI 339
Query: 377 LSISCETRQVHAYAIKNGVQAFLSIENALINAYSKCGSIAGALQCFGSVKEPDLVTWTSI 436
++ VHA AIK G+ + + + ++L++ YSKC + A + F +++E + V W ++
Sbjct: 340 VANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAM 399
Query: 437 IGAYAFHGLSKESIEVFEKMLSHAVRPDSIAFLEVLSACSHGGLVSEGLRYFNLMISDYH 496
I YA +G S + +E+F M S D F +LS C+ + G ++ +++I
Sbjct: 400 IRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKK-K 458
Query: 497 ILPDSEHYTCLTDLLGRVGLLVEAYDLLASM 527
+ + L D+ + G L +A + M
Sbjct: 459 LAKNLFVGNALVDMYAKCGALEDARQIFERM 489
Score = 184 bits (468), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 124/465 (26%), Positives = 216/465 (46%), Gaps = 38/465 (8%)
Query: 66 YSQALKVSAKFGFLQQGKQLHSHIMKLGLCNKLSLQNQVLHVYVKCKAFDDMEKLFDEMR 125
+S L A+ ++ G+Q+H ++K+GL ++ +Y KC D ++F+ +
Sbjct: 163 FSIVLSTCARETNVEFGRQIHCSMIKMGLERNSYCGGALVDMYAKCDRISDARRVFEWIV 222
Query: 126 VRNIVTWNTLISGIINCG--GNVTPYFRRMLLDNVRLDHITFNSLLRACVQADDIEVGRR 183
N V W L SG + G F RM + R DH+ F +
Sbjct: 223 DPNTVCWTCLFSGYVKAGLPEEAVLVFERMRDEGHRPDHLAFVT---------------- 266
Query: 184 LHSFILKVGFGLNCFVSSALVDLYGKCGFVEDARRVFDEVLCRDLVLWNVMVSCYALNCL 243
+++ Y + G ++DAR +F E+ D+V WNVM+S +
Sbjct: 267 -------------------VINTYIRLGKLKDARLLFGEMSSPDVVAWNVMISGHGKRGC 307
Query: 244 GDGAIAVFNLMRLEGMKGDYFTFSSLVNSCGTLGSSKLGRQIHGLVIKQSFDLDVLVATS 303
AI F MR +K T S++++ G + + LG +H IK ++ V +S
Sbjct: 308 ETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSS 367
Query: 304 LVDMYAKNGNIDDACRVFDGMTAKNVVSWNTMVVGFGQNGDGREAVKLLRDMLQGSFCPD 363
LV MY+K ++ A +VF+ + KN V WN M+ G+ NG+ + ++L DM + D
Sbjct: 368 LVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNID 427
Query: 364 EVTLASILSSCGSLSISCETRQVHAYAIKNGVQAFLSIENALINAYSKCGSIAGALQCFG 423
+ T S+LS+C + Q H+ IK + L + NAL++ Y+KCG++ A Q F
Sbjct: 428 DFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFE 487
Query: 424 SVKEPDLVTWTSIIGAYAFHGLSKESIEVFEKMLSHAVRPDSIAFLEVLSACSHGGLVSE 483
+ + D VTW +IIG+Y E+ ++F++M + D L AC+H + +
Sbjct: 488 RMCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQ 547
Query: 484 GLRYFNLMISDYHILPDSEHYTCLTDLLGRVGLLVEAYDLLASMP 528
G + L + + D + L D+ + G++ +A + +S+P
Sbjct: 548 GKQVHCLSVK-CGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLP 591
Score = 107 bits (268), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 73/301 (24%), Positives = 142/301 (47%), Gaps = 17/301 (5%)
Query: 280 KLGRQIHGLVIKQSFDLDVLVATSLVDMYAKNGNIDDACRVFDGMTAKNVVSWNTMVVGF 339
++G+ +H + D + + ++VD+YAK + A + FD + K+V +WN+M+ +
Sbjct: 77 RIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFDFLE-KDVTAWNSMLSMY 135
Query: 340 GQNGDGREAVKLLRDMLQGSFCPDEVTLASILSSCGSLSISCETRQVHAYAIKNGVQAFL 399
G + ++ + + P++ T + +LS+C + RQ+H IK G++
Sbjct: 136 SSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLERNS 195
Query: 400 SIENALINAYSKCGSIAGALQCFGSVKEPDLVTWTSIIGAYAFHGLSKESIEVFEKMLSH 459
AL++ Y+KC I+ A + F + +P+ V WT + Y GL +E++ VFE+M
Sbjct: 196 YCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRDE 255
Query: 460 AVRPDSIAFLEVLSACSHGGLVSEGLRYFNLMISDYHILPDSEHYTCLTDLLGRVG---L 516
RPD +AF+ V++ G + + F M S PD + + G+ G +
Sbjct: 256 GHRPDHLAFVTVINTYIRLGKLKDARLLFGEMSS-----PDVVAWNVMISGHGKRGCETV 310
Query: 517 LVEAYDLLASMPIEPRSDTLGAFIGACKVHGSIGLAKWAAEKLLELEPSKPVNYALVSNV 576
+E + + ++ TLG+ + A + ++ L + ++L L SN+
Sbjct: 311 AIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKL--------GLASNI 362
Query: 577 Y 577
Y
Sbjct: 363 Y 363
>sp|Q9LFL5|PP390_ARATH Pentatricopeptide repeat-containing protein At5g16860
OS=Arabidopsis thaliana GN=PCMP-H92 PE=2 SV=1
Length = 850
Score = 360 bits (924), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 211/646 (32%), Positives = 340/646 (52%), Gaps = 59/646 (9%)
Query: 70 LKVSAKFGFLQQGKQLHSHIMKLGLCNKLSLQNQVLHVYVKCKAFDDMEKLFDEMRVRNI 129
K + ++ G+ H+ + G + + + N ++ +Y +C++ D K+FDEM V ++
Sbjct: 134 FKACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDV 193
Query: 130 VTWNTLISGIINCGGN--VTPYFRRMLLD-NVRLDHITFNSLLRACVQADDIEVGRRLHS 186
V+WN++I G F RM + R D+IT ++L C +G++LH
Sbjct: 194 VSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHC 253
Query: 187 FILKVGFGLNCFVSSALVDLYGKCGFVEDARRVFDEVLCRDLVLWNVMVSCYALNCLGDG 246
F + N FV + LVD+Y KCG +++A VF + +D+V WN MV+ Y+ +
Sbjct: 254 FAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFED 313
Query: 247 AIAVFNLMRLEGMKGDYFTFS-----------------------------------SLVN 271
A+ +F M+ E +K D T+S S+++
Sbjct: 314 AVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLS 373
Query: 272 SCGTLGSSKLGRQIHGLVIKQSFDL-------DVLVATSLVDMYAKNGNIDDACRVFDGM 324
C ++G+ G++IH IK DL + +V L+DMYAK +D A +FD +
Sbjct: 374 GCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSL 433
Query: 325 TAK--NVVSWNTMVVGFGQNGDGREAVKLLRDMLQGSFC---PDEVTLASILSSCGSLSI 379
+ K +VV+W M+ G+ Q+GD +A++LL +M + C P+ T++ L +C SL+
Sbjct: 434 SPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEED-CQTRPNAFTISCALVACASLAA 492
Query: 380 SCETRQVHAYAIKNGVQAF-LSIENALINAYSKCGSIAGALQCFGSVKEPDLVTWTSIIG 438
+Q+HAYA++N A L + N LI+ Y+KCGSI+ A F ++ + VTWTS++
Sbjct: 493 LRIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMT 552
Query: 439 AYAFHGLSKESIEVFEKMLSHAVRPDSIAFLEVLSACSHGGLVSEGLRYFNLMISDYHIL 498
Y HG +E++ +F++M + D + L VL ACSH G++ +G+ YFN M + + +
Sbjct: 553 GYGMHGYGEEALGIFDEMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTVFGVS 612
Query: 499 PDSEHYTCLTDLLGRVGLLVEAYDLLASMPIEPRSDTLGAFIGACKVHGSIGLAKWAAEK 558
P EHY CL DLLGR G L A L+ MP+EP AF+ C++HG + L ++AAEK
Sbjct: 613 PGPEHYACLVDLLGRAGRLNAALRLIEEMPMEPPPVVWVAFLSCCRIHGKVELGEYAAEK 672
Query: 559 LLELEPSKPVNYALVSNVYASERCWFDVARLRKMMRDNCDHKVPGCSWIEIAGEIHTFVS 618
+ EL + +Y L+SN+YA+ W DV R+R +MR K PGCSW+E TF
Sbjct: 673 ITELASNHDGSYTLLSNLYANAGRWKDVTRIRSLMRHKGVKKRPGCSWVEGIKGTTTFFV 732
Query: 619 SDRSHPQAVHMYAML------CTVFGLMEENNVSGHCNVLDKEMDE 658
D++HP A +Y +L G + E + H +V D+E D+
Sbjct: 733 GDKTHPHAKEIYQVLLDHMQRIKDIGYVPETGFALH-DVDDEEKDD 777
Score = 140 bits (354), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 84/315 (26%), Positives = 157/315 (49%), Gaps = 4/315 (1%)
Query: 182 RRLHSFILKVGFGLNCFVSSALVDLYGKCGFVEDARRVFDEVLCRD--LVLWNVMVSCYA 239
+ +H +L G L ++S L+ Y G + A + D + WN ++ Y
Sbjct: 45 KLIHQKLLSFGI-LTLNLTSHLISTYISVGCLSHAVSLLRRFPPSDAGVYHWNSLIRSYG 103
Query: 240 LNCLGDGAIAVFNLMRLEGMKGDYFTFSSLVNSCGTLGSSKLGRQIHGLVIKQSFDLDVL 299
N + + +F LM D +TF + +CG + S + G H L + F +V
Sbjct: 104 DNGCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEISSVRCGESAHALSLVTGFISNVF 163
Query: 300 VATSLVDMYAKNGNIDDACRVFDGMTAKNVVSWNTMVVGFGQNGDGREAVKLLRDMLQGS 359
V +LV MY++ ++ DA +VFD M+ +VVSWN+++ + + G + A+++ M
Sbjct: 164 VGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEF 223
Query: 360 FC-PDEVTLASILSSCGSLSISCETRQVHAYAIKNGVQAFLSIENALINAYSKCGSIAGA 418
C PD +TL ++L C SL +Q+H +A+ + + + + N L++ Y+KCG + A
Sbjct: 224 GCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEA 283
Query: 419 LQCFGSVKEPDLVTWTSIIGAYAFHGLSKESIEVFEKMLSHAVRPDSIAFLEVLSACSHG 478
F ++ D+V+W +++ Y+ G ++++ +FEKM ++ D + + +S +
Sbjct: 284 NTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQR 343
Query: 479 GLVSEGLRYFNLMIS 493
GL E L M+S
Sbjct: 344 GLGYEALGVCRQMLS 358
Score = 99.0 bits (245), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 72/266 (27%), Positives = 129/266 (48%), Gaps = 10/266 (3%)
Query: 269 LVNSCGTLGSSKLGRQIHGLVIKQSFDLDVLVATS-LVDMYAKNGNIDDACRVFDGMTAK 327
++ C T+ KL IH ++ SF + L TS L+ Y G + A +
Sbjct: 34 FIHKCKTISQVKL---IHQKLL--SFGILTLNLTSHLISTYISVGCLSHAVSLLRRFPPS 88
Query: 328 N--VVSWNTMVVGFGQNGDGREAVKLLRDMLQGSFCPDEVTLASILSSCGSLSISCETRQ 385
+ V WN+++ +G NG + + L M S+ PD T + +CG +S
Sbjct: 89 DAGVYHWNSLIRSYGDNGCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEISSVRCGES 148
Query: 386 VHAYAIKNGVQAFLSIENALINAYSKCGSIAGALQCFGSVKEPDLVTWTSIIGAYAFHGL 445
HA ++ G + + + NAL+ YS+C S++ A + F + D+V+W SII +YA G
Sbjct: 149 AHALSLVTGFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGK 208
Query: 446 SKESIEVFEKMLSH-AVRPDSIAFLEVLSACSHGGLVSEGLRYFNLMISDYHILPDSEHY 504
K ++E+F +M + RPD+I + VL C+ G S G + ++ ++ +
Sbjct: 209 PKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTS-EMIQNMFVG 267
Query: 505 TCLTDLLGRVGLLVEAYDLLASMPIE 530
CL D+ + G++ EA + ++M ++
Sbjct: 268 NCLVDMYAKCGMMDEANTVFSNMSVK 293
>sp|Q9SMZ2|PP347_ARATH Pentatricopeptide repeat-containing protein At4g33170
OS=Arabidopsis thaliana GN=PCMP-H53 PE=3 SV=1
Length = 990
Score = 356 bits (914), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 194/564 (34%), Positives = 317/564 (56%), Gaps = 4/564 (0%)
Query: 70 LKVSAKFGFLQQGKQLHSHIMKLGLCNKLSLQNQVLHVYVKCKAFDDMEKLFDEMRVRNI 129
L + K L G+Q+H +KLGL L++ N ++++Y K + F +FD M R++
Sbjct: 322 LATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDL 381
Query: 130 VTWNTLISGIINCGGNVTP--YFRRMLLDNVRLDHITFNSLLRACVQ-ADDIEVGRRLHS 186
++WN++I+GI G V F ++L ++ D T S+L+A + + + +++H
Sbjct: 382 ISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHV 441
Query: 187 FILKVGFGLNCFVSSALVDLYGKCGFVEDARRVFDEVLCRDLVLWNVMVSCYALNCLGDG 246
+K+ + FVS+AL+D Y + +++A +F E DLV WN M++ Y + G
Sbjct: 442 HAIKINNVSDSFVSTALIDAYSRNRCMKEAEILF-ERHNFDLVAWNAMMAGYTQSHDGHK 500
Query: 247 AIAVFNLMRLEGMKGDYFTFSSLVNSCGTLGSSKLGRQIHGLVIKQSFDLDVLVATSLVD 306
+ +F LM +G + D FT +++ +CG L + G+Q+H IK +DLD+ V++ ++D
Sbjct: 501 TLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILD 560
Query: 307 MYAKNGNIDDACRVFDGMTAKNVVSWNTMVVGFGQNGDGREAVKLLRDMLQGSFCPDEVT 366
MY K G++ A FD + + V+W TM+ G +NG+ A + M PDE T
Sbjct: 561 MYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFT 620
Query: 367 LASILSSCGSLSISCETRQVHAYAIKNGVQAFLSIENALINAYSKCGSIAGALQCFGSVK 426
+A++ + L+ + RQ+HA A+K + +L++ Y+KCGSI A F ++
Sbjct: 621 IATLAKASSCLTALEQGRQIHANALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIE 680
Query: 427 EPDLVTWTSIIGAYAFHGLSKESIEVFEKMLSHAVRPDSIAFLEVLSACSHGGLVSEGLR 486
++ W +++ A HG KE++++F++M S ++PD + F+ VLSACSH GLVSE +
Sbjct: 681 MMNITAWNAMLVGLAQHGEGKETLQLFKQMKSLGIKPDKVTFIGVLSACSHSGLVSEAYK 740
Query: 487 YFNLMISDYHILPDSEHYTCLTDLLGRVGLLVEAYDLLASMPIEPRSDTLGAFIGACKVH 546
+ M DY I P+ EHY+CL D LGR GL+ +A +L+ SM +E + + AC+V
Sbjct: 741 HMRSMHGDYGIKPEIEHYSCLADALGRAGLVKQAENLIESMSMEASASMYRTLLAACRVQ 800
Query: 547 GSIGLAKWAAEKLLELEPSKPVNYALVSNVYASERCWFDVARLRKMMRDNCDHKVPGCSW 606
G K A KLLELEP Y L+SN+YA+ W ++ R MM+ + K PG SW
Sbjct: 801 GDTETGKRVATKLLELEPLDSSAYVLLSNMYAAASKWDEMKLARTMMKGHKVKKDPGFSW 860
Query: 607 IEIAGEIHTFVSSDRSHPQAVHMY 630
IE+ +IH FV DRS+ Q +Y
Sbjct: 861 IEVKNKIHIFVVDDRSNRQTELIY 884
Score = 177 bits (450), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 114/359 (31%), Positives = 194/359 (54%), Gaps = 6/359 (1%)
Query: 122 DEMRVRNIVTWNTLISGIINCG--GNVTPYFRRMLLDNVRLDHITFNSLLRACVQADDIE 179
D V I+ N +S ++ G + F M+ +V D +TF +L V+ D +
Sbjct: 273 DASSVSEIIFRNKGLSEYLHSGQYSALLKCFADMVESDVECDQVTFILMLATAVKVDSLA 332
Query: 180 VGRRLHSFILKVGFGLNCFVSSALVDLYGKCGFVEDARRVFDEVLCRDLVLWNVMVSCYA 239
+G+++H LK+G L VS++L+++Y K AR VFD + RDL+ WN +++ A
Sbjct: 333 LGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIA 392
Query: 240 LNCLGDGAIAVFNLMRLEGMKGDYFTFSSLVNSCGTLGSS-KLGRQIHGLVIKQSFDLDV 298
N L A+ +F + G+K D +T +S++ + +L L +Q+H IK + D
Sbjct: 393 QNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDS 452
Query: 299 LVATSLVDMYAKNGNIDDACRVFDGMTAKNVVSWNTMVVGFGQNGDGREAVKLLRDMLQG 358
V+T+L+D Y++N + +A +F+ ++V+WN M+ G+ Q+ DG + +KL M +
Sbjct: 453 FVSTALIDAYSRNRCMKEAEILFERHNF-DLVAWNAMMAGYTQSHDGHKTLKLFALMHKQ 511
Query: 359 SFCPDEVTLASILSSCGSLSISCETRQVHAYAIKNGVQAFLSIENALINAYSKCGSIAGA 418
D+ TLA++ +CG L + +QVHAYAIK+G L + + +++ Y KCG ++ A
Sbjct: 512 GERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAA 571
Query: 419 LQCFGSVKEPDLVTWTSIIGAYAFHGLSKESIEVFEKMLSHAVRPD--SIAFLEVLSAC 475
F S+ PD V WT++I +G + + VF +M V PD +IA L S+C
Sbjct: 572 QFAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSC 630
Score = 141 bits (355), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 108/426 (25%), Positives = 188/426 (44%), Gaps = 51/426 (11%)
Query: 76 FGFLQQ---------GKQLHSHIMKLGLCNKLSLQNQVLHVYVKCKAFDDMEKLFDEMRV 126
FGFL+ GK H+ I+ + L N ++ +Y KC + ++FD+M
Sbjct: 43 FGFLRNAITSSDLMLGKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPD 102
Query: 127 RNIVTWNTLISGIINCGGNVTP-------YFRRMLLDNVRLDHITFNSLLRACVQADDIE 179
R++V+WN++++ V FR + D V +T + +L+ C+ + +
Sbjct: 103 RDLVSWNSILAAYAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVW 162
Query: 180 VGRRLHSFILKVGFGLNCFVSSALVDLYGKCGFVEDARRVFDEVLCRDLVLWNVMVSCYA 239
H + K+G + FV+ ALV++Y K G V++ + +F+E+ RD+VLWN+M+ Y
Sbjct: 163 ASESFHGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYL 222
Query: 240 LNCLGDGAIAVFNLMRLEGMKGDYFTFSSLVNSCGTLGSSKLGRQIHGLVIKQSFDLDVL 299
+ AI + + G+ + T L G D D
Sbjct: 223 EMGFKEEAIDLSSAFHSSGLNPNEITLRLLARISGD-------------------DSDAG 263
Query: 300 VATSLVDMYAKNGNIDDACRVFDGMTAKNVVSWNTMVVGFGQNGDGREAVKLLRDMLQGS 359
S NGN D + ++ N + + +G +K DM++
Sbjct: 264 QVKSFA-----NGN--------DASSVSEIIFRNKGLSEYLHSGQYSALLKCFADMVESD 310
Query: 360 FCPDEVTLASILSSCGSLSISCETRQVHAYAIKNGVQAFLSIENALINAYSKCGSIAGAL 419
D+VT +L++ + +QVH A+K G+ L++ N+LIN Y K A
Sbjct: 311 VECDQVTFILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFAR 370
Query: 420 QCFGSVKEPDLVTWTSIIGAYAFHGLSKESIEVFEKMLSHAVRPDSIAFLEVLSACSHGG 479
F ++ E DL++W S+I A +GL E++ +F ++L ++PD VL A S
Sbjct: 371 TVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASS-- 428
Query: 480 LVSEGL 485
+ EGL
Sbjct: 429 -LPEGL 433
Score = 121 bits (304), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 107/429 (24%), Positives = 189/429 (44%), Gaps = 52/429 (12%)
Query: 67 SQALKVSAKFGFLQQGKQLHSHIMKLGLCNKLSLQNQVLHVYVKCKAFDDMEKLFDEMRV 126
S LK+ G++ + H + K+GL + ++++Y+K + + LF+EM
Sbjct: 149 SPMLKLCLHSGYVWASESFHGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPY 208
Query: 127 RNIVTWNTLISGIINCGGNVTPYFRRMLLD--------NVRLDHITFNSLLRACVQADDI 178
R++V WN ++ + G F+ +D + + IT L R + DD
Sbjct: 209 RDVVLWNLMLKAYLEMG------FKEEAIDLSSAFHSSGLNPNEITLRLLAR--ISGDDS 260
Query: 179 EVGRRLHSFILKVGFGLNCFVSSALVDLYGKCGFVEDARRVFDEVLCRDLVLWNVMVSCY 238
+ G+ + F + DA V +++ N +S Y
Sbjct: 261 DAGQ------------VKSFANG------------NDASSV------SEIIFRNKGLSEY 290
Query: 239 ALNCLGDGAIAVFNLMRLEGMKGDYFTFSSLVNSCGTLGSSKLGRQIHGLVIKQSFDLDV 298
+ + F M ++ D TF ++ + + S LG+Q+H + +K DL +
Sbjct: 291 LHSGQYSALLKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCMALKLGLDLML 350
Query: 299 LVATSLVDMYAKNGNIDDACRVFDGMTAKNVVSWNTMVVGFGQNGDGREAVKLLRDMLQG 358
V+ SL++MY K A VFD M+ ++++SWN+++ G QNG EAV L +L+
Sbjct: 351 TVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRC 410
Query: 359 SFCPDEVTLASILSSCGSLSISCE-TRQVHAYAIK--NGVQAFLSIENALINAYSKCGSI 415
PD+ T+ S+L + SL ++QVH +AIK N +F+S ALI+AYS+ +
Sbjct: 411 GLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVS--TALIDAYSRNRCM 468
Query: 416 AGALQCFGSVKEPDLVTWTSIIGAYAFHGLSKESIEVFEKMLSHAVRPDSIAFLEVLSAC 475
A F DLV W +++ Y +++++F M R D V C
Sbjct: 469 KEAEILF-ERHNFDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTC 527
Query: 476 SHGGLVSEG 484
+++G
Sbjct: 528 GFLFAINQG 536
>sp|Q9LRV9|PP228_ARATH Pentatricopeptide repeat-containing protein At3g13880
OS=Arabidopsis thaliana GN=PCMP-E89 PE=2 SV=1
Length = 748
Score = 356 bits (913), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 192/581 (33%), Positives = 322/581 (55%), Gaps = 10/581 (1%)
Query: 66 YSQALKVSAKFGFLQQGKQLHSHIMKLGLCNKLSLQNQVLHVYVKCKAFDDMEKLFDEMR 125
Y+ AL + L G+ LH ++ GL ++ L N ++ +Y KC D LFD
Sbjct: 151 YAGALGFCGERCDLDLGELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCD 210
Query: 126 VRNIVTWNTLISGIINCGGNVTPY--FRRMLLDNVRLDHITFNSLLRAC---VQADDIEV 180
R+ V+WN+LISG + G P +M D + L S+L+AC + IE
Sbjct: 211 ERDQVSWNSLISGYVRVGAAEEPLNLLAKMHRDGLNLTTYALGSVLKACCINLNEGFIEK 270
Query: 181 GRRLHSFILKVGFGLNCFVSSALVDLYGKCGFVEDARRVFDEVLCRDLVLWNVMVSCY-A 239
G +H + K+G + V +AL+D+Y K G +++A ++F + +++V +N M+S +
Sbjct: 271 GMAIHCYTAKLGMEFDIVVRTALLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMISGFLQ 330
Query: 240 LNCLGDGA----IAVFNLMRLEGMKGDYFTFSSLVNSCGTLGSSKLGRQIHGLVIKQSFD 295
++ + D A +F M+ G++ TFS ++ +C + + GRQIH L+ K +F
Sbjct: 331 MDEITDEASSEAFKLFMDMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKNNFQ 390
Query: 296 LDVLVATSLVDMYAKNGNIDDACRVFDGMTAKNVVSWNTMVVGFGQNGDGREAVKLLRDM 355
D + ++L+++YA G+ +D + F + +++ SW +M+ QN A L R +
Sbjct: 391 SDEFIGSALIELYALMGSTEDGMQCFASTSKQDIASWTSMIDCHVQNEQLESAFDLFRQL 450
Query: 356 LQGSFCPDEVTLASILSSCGSLSISCETRQVHAYAIKNGVQAFLSIENALINAYSKCGSI 415
P+E T++ ++S+C + Q+ YAIK+G+ AF S++ + I+ Y+K G++
Sbjct: 451 FSSHIRPEEYTVSLMMSACADFAALSSGEQIQGYAIKSGIDAFTSVKTSSISMYAKSGNM 510
Query: 416 AGALQCFGSVKEPDLVTWTSIIGAYAFHGLSKESIEVFEKMLSHAVRPDSIAFLEVLSAC 475
A Q F V+ PD+ T++++I + A HG + E++ +FE M +H ++P+ AFL VL AC
Sbjct: 511 PLANQVFIEVQNPDVATYSAMISSLAQHGSANEALNIFESMKTHGIKPNQQAFLGVLIAC 570
Query: 476 SHGGLVSEGLRYFNLMISDYHILPDSEHYTCLTDLLGRVGLLVEAYDLLASMPIEPRSDT 535
HGGLV++GL+YF M +DY I P+ +H+TCL DLLGR G L +A +L+ S + T
Sbjct: 571 CHGGLVTQGLKYFQCMKNDYRINPNEKHFTCLVDLLGRTGRLSDAENLILSSGFQDHPVT 630
Query: 536 LGAFIGACKVHGSIGLAKWAAEKLLELEPSKPVNYALVSNVYASERCWFDVARLRKMMRD 595
A + +C+V+ + K AE+L+ELEP +Y L+ N+Y +R++MRD
Sbjct: 631 WRALLSSCRVYKDSVIGKRVAERLMELEPEASGSYVLLHNIYNDSGVNSSAEEVRELMRD 690
Query: 596 NCDHKVPGCSWIEIAGEIHTFVSSDRSHPQAVHMYAMLCTV 636
K P SWI I + H+F +D SHP + +Y ML T+
Sbjct: 691 RGVKKEPALSWIVIGNQTHSFAVADLSHPSSQMIYTMLETM 731
Score = 214 bits (545), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 152/528 (28%), Positives = 250/528 (47%), Gaps = 46/528 (8%)
Query: 66 YSQALKVSAKFGFLQQGKQLHSHIMKLGLCNKLSLQNQVLHVYVKCKAFDDMEKLFDEMR 125
Y + +AK G + GK H H++K L L L N +L++Y KC+ +LFD M
Sbjct: 50 YKILFQTAAKSGSVVLGKLAHGHMIKSSLNPCLYLLNNLLNMYCKCRELGFARQLFDRMP 109
Query: 126 VRNIVTWNTLISGIINCG--GNVTPYFRRMLLDNVRLDHITFNSLLRACVQADDIEVGRR 183
RNI+++N+LISG G F N++LD T+ L C + D+++G
Sbjct: 110 ERNIISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFTYAGALGFCGERCDLDLGEL 169
Query: 184 LHSFILKVGFGLNCFVSSALVDLYGKCGFVEDARRVFDEVLCRDLVLWNVMVSCYALNCL 243
LH ++ G F+ + L+D+Y KCG ++ A +FD RD V WN ++S Y
Sbjct: 170 LHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCDERDQVSWNSLISGYVRVGA 229
Query: 244 GDGAIAVFNLMRLEGMKGDYFTFSSLVNSCG---TLGSSKLGRQIHGLVIKQSFDLDVLV 300
+ + + M +G+ + S++ +C G + G IH K + D++V
Sbjct: 230 AEEPLNLLAKMHRDGLNLTTYALGSVLKACCINLNEGFIEKGMAIHCYTAKLGMEFDIVV 289
Query: 301 ATSLVDMYAKNGNIDDACRVFDGMTAKNVVSWNTMVVGFGQNGD-----GREAVKLLRDM 355
T+L+DMYAKNG++ +A ++F M +KNVV++N M+ GF Q + EA KL DM
Sbjct: 290 RTALLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMISGFLQMDEITDEASSEAFKLFMDM 349
Query: 356 LQGSFCPDEVTLASILSSCGSLSISCETRQVHAYAIKNGVQAFLSIENALINAYSKCGSI 415
+ P T + +L +C + RQ+HA KN Q+ I +ALI Y+ GS
Sbjct: 350 QRRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKNNFQSDEFIGSALIELYALMGST 409
Query: 416 AGALQCFGSVKEPDLVTWTSIIGAYAFHGLSKESIEVFEKMLSHAVRPDSIAFLEVLSAC 475
+QCF S + D+ +WTS+I + + + + ++F ++ S +RP+ ++SAC
Sbjct: 410 EDGMQCFASTSKQDIASWTSMIDCHVQNEQLESAFDLFRQLFSSHIRPEEYTVSLMMSAC 469
Query: 476 S-----------HGGLVSEGLRYF---------------NLMISDYHIL----PDSEHYT 505
+ G + G+ F N+ +++ + PD Y+
Sbjct: 470 ADFAALSSGEQIQGYAIKSGIDAFTSVKTSSISMYAKSGNMPLANQVFIEVQNPDVATYS 529
Query: 506 CLTDLLGRVGLLVEAYDLLASMP---IEPRSDT-LGAFIGACKVHGSI 549
+ L + G EA ++ SM I+P LG I C HG +
Sbjct: 530 AMISSLAQHGSANEALNIFESMKTHGIKPNQQAFLGVLIACC--HGGL 575
Score = 129 bits (325), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 93/370 (25%), Positives = 174/370 (47%), Gaps = 15/370 (4%)
Query: 157 NVRLDHITFNSLLRACVQADDIEVGRRLHSFILKVGFGLNCFVSSALVDLYGKCGFVEDA 216
N LD + L + ++ + +G+ H ++K ++ + L+++Y KC + A
Sbjct: 42 NTALDSEGYKILFQTAAKSGSVVLGKLAHGHMIKSSLNPCLYLLNNLLNMYCKCRELGFA 101
Query: 217 RRVFDEVLCRDLVLWNVMVSCYALNCLGDGAIAVFNLMRLEGMKGDYFTFSSLVNSCGTL 276
R++FD + R+++ +N ++S Y + A+ +F R +K D FT++ + CG
Sbjct: 102 RQLFDRMPERNIISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFTYAGALGFCGER 161
Query: 277 GSSKLGRQIHGLVIKQSFDLDVLVATSLVDMYAKNGNIDDACRVFDGMTAKNVVSWNTMV 336
LG +HGLV+ V + L+DMY+K G +D A +FD ++ VSWN+++
Sbjct: 162 CDLDLGELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCDERDQVSWNSLI 221
Query: 337 VGFGQNGDGREAVKLLRDMLQGSFCPDEVTLASILSSC------GSLSISCETRQVHAYA 390
G+ + G E + LL M + L S+L +C G + + +H Y
Sbjct: 222 SGYVRVGAAEEPLNLLAKMHRDGLNLTTYALGSVLKACCINLNEGFIE---KGMAIHCYT 278
Query: 391 IKNGVQAFLSIENALINAYSKCGSIAGALQCFGSVKEPDLVTWTSIIGAY-----AFHGL 445
K G++ + + AL++ Y+K GS+ A++ F + ++VT+ ++I +
Sbjct: 279 AKLGMEFDIVVRTALLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMISGFLQMDEITDEA 338
Query: 446 SKESIEVFEKMLSHAVRPDSIAFLEVLSACSHGGLVSEGLRYFNLMISDYHILPDSEHYT 505
S E+ ++F M + P F VL ACS + G R + +I + D +
Sbjct: 339 SSEAFKLFMDMQRRGLEPSPSTFSVVLKACSAAKTLEYG-RQIHALICKNNFQSDEFIGS 397
Query: 506 CLTDLLGRVG 515
L +L +G
Sbjct: 398 ALIELYALMG 407
Score = 69.7 bits (169), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 57/262 (21%), Positives = 117/262 (44%), Gaps = 13/262 (4%)
Query: 64 SFYSQALKVSAKFGFLQQGKQLHSHIMKLGLCNKLSLQNQVLHVYVKCKAFDDMEKLFDE 123
S +S LK + L+ G+Q+H+ I K + + + ++ +Y + +D + F
Sbjct: 359 STFSVVLKACSAAKTLEYGRQIHALICKNNFQSDEFIGSALIELYALMGSTEDGMQCFAS 418
Query: 124 MRVRNIVTWNTLISGIINCGGNVTPY--FRRMLLDNVRLDHITFNSLLRACVQADDIEVG 181
++I +W ++I + + + FR++ ++R + T + ++ AC + G
Sbjct: 419 TSKQDIASWTSMIDCHVQNEQLESAFDLFRQLFSSHIRPEEYTVSLMMSACADFAALSSG 478
Query: 182 RRLHSFILKVGFGLNCFVSSALVDLYGKCGFVEDARRVFDEVLCRDLVLWNVMVSCYALN 241
++ + +K G V ++ + +Y K G + A +VF EV D+ ++ M+S A +
Sbjct: 479 EQIQGYAIKSGIDAFTSVKTSSISMYAKSGNMPLANQVFIEVQNPDVATYSAMISSLAQH 538
Query: 242 CLGDGAIAVFNLMRLEGMKGDYFTFSSLVNSCGTLGSSKLGRQIHGLVIKQSFDLDVLVA 301
+ A+ +F M+ G+K + F ++ +C G GL Q D +
Sbjct: 539 GSANEALNIFESMKTHGIKPNQQAFLGVLIAC-----CHGGLVTQGLKYFQCMKNDYRIN 593
Query: 302 ------TSLVDMYAKNGNIDDA 317
T LVD+ + G + DA
Sbjct: 594 PNEKHFTCLVDLLGRTGRLSDA 615
>sp|O49619|PP350_ARATH Pentatricopeptide repeat-containing protein At4g35130,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H27 PE=3
SV=1
Length = 804
Score = 356 bits (913), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 198/589 (33%), Positives = 326/589 (55%), Gaps = 10/589 (1%)
Query: 66 YSQALKVSAKFGFLQQGKQLHSHIMKLGLCNKLSLQNQVLHVYVKCKAFDDMEKLFDEMR 125
Y +K A L++GK++H+ ++KLG + + + N ++ +Y+K D EK+F+EM
Sbjct: 133 YPFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMP 192
Query: 126 VRNIVTWNTLISGIINCGGNVTPY--FRRMLLDNVRLDHITFNSLLRACVQADDIEVGRR 183
R+IV+WN++ISG + G + F+ ML + D + S L AC ++G+
Sbjct: 193 ERDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKE 252
Query: 184 LHSFILKVGFGL-NCFVSSALVDLYGKCGFVEDARRVFDEVLCRDLVLWNVMVSCYALNC 242
+H ++ + V ++++D+Y K G V A R+F+ ++ R++V WNVM+ CYA N
Sbjct: 253 IHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNG 312
Query: 243 LGDGAIAVFNLMRLE-GMKGDYFTFSSLVNSCGTLGSSKLGRQIHGLVIKQSFDLDVLVA 301
A F M + G++ D T +L+ + L GR IHG +++ F +++
Sbjct: 313 RVTDAFLCFQKMSEQNGLQPDVITSINLLPASAILE----GRTIHGYAMRRGFLPHMVLE 368
Query: 302 TSLVDMYAKNGNIDDACRVFDGMTAKNVVSWNTMVVGFGQNGDGREAVKLLRDMLQGSFC 361
T+L+DMY + G + A +FD M KNV+SWN+++ + QNG A++L +++ S
Sbjct: 369 TALIDMYGECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALELFQELWDSSLV 428
Query: 362 PDEVTLASILSSCG-SLSISCETRQVHAYAIKNGVQAFLSIENALINAYSKCGSIAGALQ 420
PD T+ASIL + SLS+S E R++HAY +K+ + I N+L++ Y+ CG + A +
Sbjct: 429 PDSTTIASILPAYAESLSLS-EGREIHAYIVKSRYWSNTIILNSLVHMYAMCGDLEDARK 487
Query: 421 CFGSVKEPDLVTWTSIIGAYAFHGLSKESIEVFEKMLSHAVRPDSIAFLEVLSACSHGGL 480
CF + D+V+W SII AYA HG + S+ +F +M++ V P+ F +L+ACS G+
Sbjct: 488 CFNHILLKDVVSWNSIIMAYAVHGFGRISVWLFSEMIASRVNPNKSTFASLLAACSISGM 547
Query: 481 VSEGLRYFNLMISDYHILPDSEHYTCLTDLLGRVGLLVEAYDLLASMPIEPRSDTLGAFI 540
V EG YF M +Y I P EHY C+ DL+GR G A L MP P + G+ +
Sbjct: 548 VDEGWEYFESMKREYGIDPGIEHYGCMLDLIGRTGNFSAAKRFLEEMPFVPTARIWGSLL 607
Query: 541 GACKVHGSIGLAKWAAEKLLELEPSKPVNYALVSNVYASERCWFDVARLRKMMRDNCDHK 600
A + H I +A++AAE++ ++E Y L+ N+YA W DV R++ +M +
Sbjct: 608 NASRNHKDITIAEFAAEQIFKMEHDNTGCYVLLLNMYAEAGRWEDVNRIKLLMESKGISR 667
Query: 601 VPGCSWIEIAGEIHTFVSSDRSHPQAVHMYAMLCTVFGLMEENNVSGHC 649
S +E G+ H F + DRSH +Y +L V ++ E ++ HC
Sbjct: 668 TSSRSTVEAKGKSHVFTNGDRSHVATNKIYEVLDVVSRMVGEEDIYVHC 716
Score = 158 bits (399), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 100/352 (28%), Positives = 180/352 (51%), Gaps = 24/352 (6%)
Query: 212 FVEDARRVFDEVLCRDLVLWNVMVSCYALNCLGDGAIAVFNLMRLEGMKGDYFTFSSLVN 271
+EDA ++FDE+ D LWNVM+ + L A+ ++ M G+K D FT+ ++
Sbjct: 79 LMEDALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGVKADTFTYPFVIK 138
Query: 272 SCGTLGSSKLGRQIHGLVIKQSFDLDVLVATSLVDMYAKNGNIDDACRVFDGMTAKNVVS 331
S + S + G++IH +VIK F DV V SL+ +Y K G DA +VF+ M +++VS
Sbjct: 139 SVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPERDIVS 198
Query: 332 WNTMVVGFGQNGDGREAVKLLRDMLQGSFCPDEVTLASILSSCGSLSISCETRQVHAYAI 391
WN+M+ G+ GDG ++ L ++ML+ F PD + S L +C + +++H +A+
Sbjct: 199 WNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKEIHCHAV 258
Query: 392 KNGVQAF-LSIENALINAYSKCGSIAGALQCFGSVKEPDLVTWTSIIGAYAFHGLSKESI 450
++ ++ + + ++++ YSK G ++ A + F + + ++V W +IG YA +G ++
Sbjct: 259 RSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNGRVTDAF 318
Query: 451 EVFEKMLSH-AVRPDSIAFLEVLSACS-------HGGLVSEGLRYFNLMISDYHILPDSE 502
F+KM ++PD I + +L A + HG + G LP
Sbjct: 319 LCFQKMSEQNGLQPDVITSINLLPASAILEGRTIHGYAMRRGF------------LPHMV 366
Query: 503 HYTCLTDLLGRVGLLVEA---YDLLASMPIEPRSDTLGAFIGACKVHGSIGL 551
T L D+ G G L A +D +A + + + A++ K + ++ L
Sbjct: 367 LETALIDMYGECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALEL 418
Score = 90.9 bits (224), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 86/170 (50%)
Query: 308 YAKNGNIDDACRVFDGMTAKNVVSWNTMVVGFGQNGDGREAVKLLRDMLQGSFCPDEVTL 367
+A + ++DA ++FD M + WN M+ GF G EAV+ M+ D T
Sbjct: 74 FADSRLMEDALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGVKADTFTY 133
Query: 368 ASILSSCGSLSISCETRQVHAYAIKNGVQAFLSIENALINAYSKCGSIAGALQCFGSVKE 427
++ S +S E +++HA IK G + + + N+LI+ Y K G A + F + E
Sbjct: 134 PFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPE 193
Query: 428 PDLVTWTSIIGAYAFHGLSKESIEVFEKMLSHAVRPDSIAFLEVLSACSH 477
D+V+W S+I Y G S+ +F++ML +PD + + L ACSH
Sbjct: 194 RDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSH 243
>sp|O81767|PP348_ARATH Pentatricopeptide repeat-containing protein At4g33990
OS=Arabidopsis thaliana GN=EMB2758 PE=3 SV=2
Length = 823
Score = 355 bits (911), Expect = 6e-97, Method: Compositional matrix adjust.
Identities = 190/558 (34%), Positives = 307/558 (55%), Gaps = 6/558 (1%)
Query: 82 GKQLHSHIMKLGLCNKLSLQNQVLHVYVKCKAFDDMEKLFDEMRVRNIVTWNTLISGIIN 141
G ++H +K G + + ++H+Y + KA + LFDEM VR++ +WN +ISG
Sbjct: 169 GNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQ 228
Query: 142 CGGNVTPYFRRMLLDNVR-LDHITFNSLLRACVQADDIEVGRRLHSFILKVGFGLNCFVS 200
G L + +R +D +T SLL AC +A D G +HS+ +K G FVS
Sbjct: 229 SGNAKEAL---TLSNGLRAMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVS 285
Query: 201 SALVDLYGKCGFVEDARRVFDEVLCRDLVLWNVMVSCYALNCLGDGAIAVFNLMRLEGMK 260
+ L+DLY + G + D ++VFD + RDL+ WN ++ Y LN AI++F MRL ++
Sbjct: 286 NKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQ 345
Query: 261 GDYFTFSSLVNSCGTLGSSKLGRQIHGLVIKQSFDL-DVLVATSLVDMYAKNGNIDDACR 319
D T SL + LG + R + G +++ + L D+ + ++V MYAK G +D A
Sbjct: 346 PDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARA 405
Query: 320 VFDGMTAKNVVSWNTMVVGFGQNGDGREAVKLLRDMLQ-GSFCPDEVTLASILSSCGSLS 378
VF+ + +V+SWNT++ G+ QNG EA+++ M + G ++ T S+L +C
Sbjct: 406 VFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAG 465
Query: 379 ISCETRQVHAYAIKNGVQAFLSIENALINAYSKCGSIAGALQCFGSVKEPDLVTWTSIIG 438
+ ++H +KNG+ + + +L + Y KCG + AL F + + V W ++I
Sbjct: 466 ALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIA 525
Query: 439 AYAFHGLSKESIEVFEKMLSHAVRPDSIAFLEVLSACSHGGLVSEGLRYFNLMISDYHIL 498
+ FHG ++++ +F++ML V+PD I F+ +LSACSH GLV EG F +M +DY I
Sbjct: 526 CHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGIT 585
Query: 499 PDSEHYTCLTDLLGRVGLLVEAYDLLASMPIEPRSDTLGAFIGACKVHGSIGLAKWAAEK 558
P +HY C+ D+ GR G L A + SM ++P + GA + AC+VHG++ L K A+E
Sbjct: 586 PSLKHYGCMVDMYGRAGQLETALKFIKSMSLQPDASIWGALLSACRVHGNVDLGKIASEH 645
Query: 559 LLELEPSKPVNYALVSNVYASERCWFDVARLRKMMRDNCDHKVPGCSWIEIAGEIHTFVS 618
L E+EP + L+SN+YAS W V +R + K PG S +E+ ++ F +
Sbjct: 646 LFEVEPEHVGYHVLLSNMYASAGKWEGVDEIRSIAHGKGLRKTPGWSSMEVDNKVEVFYT 705
Query: 619 SDRSHPQAVHMYAMLCTV 636
+++HP MY L +
Sbjct: 706 GNQTHPMYEEMYRELTAL 723
Score = 196 bits (499), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 133/459 (28%), Positives = 231/459 (50%), Gaps = 21/459 (4%)
Query: 79 LQQGKQLHSHIMKLGLCNKLSLQNQVLHVYVKCKAFDDMEKLFDEMRVRNIVTWNTLISG 138
LQ K LH+ ++ + + +++++Y FD ++ R++ WN +ISG
Sbjct: 67 LQSAKCLHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLMISG 126
Query: 139 IINCGGNVTPYFR----RMLLDNVRLDHITFNSLLRACVQADDIEVGRRLHSFILKVGFG 194
GN + R ML + D+ TF S+L+AC D G ++H LK GF
Sbjct: 127 -YGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACRTVID---GNKIHCLALKFGFM 182
Query: 195 LNCFVSSALVDLYGKCGFVEDARRVFDEVLCRDLVLWNVMVSCYALNCLGDGAIAVFNLM 254
+ +V+++L+ LY + V +AR +FDE+ RD+ WN M+S Y + A+ + N +
Sbjct: 183 WDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEALTLSNGL 242
Query: 255 RLEGMKGDYFTFSSLVNSCGTLGSSKLGRQIHGLVIKQSFDLDVLVATSLVDMYAKNGNI 314
R D T SL+++C G G IH IK + ++ V+ L+D+YA+ G +
Sbjct: 243 R----AMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRL 298
Query: 315 DDACRVFDGMTAKNVVSWNTMVVGFGQNGDGREAVKLLRDMLQGSFCPDEVT---LASIL 371
D +VFD M ++++SWN+++ + N A+ L ++M PD +T LASIL
Sbjct: 299 RDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASIL 358
Query: 372 SSCGSLSISCETRQVHAYAIKNG-VQAFLSIENALINAYSKCGSIAGALQCFGSVKEPDL 430
S G + +C R V + ++ G ++I NA++ Y+K G + A F + D+
Sbjct: 359 SQLGDIR-AC--RSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDV 415
Query: 431 VTWTSIIGAYAFHGLSKESIEVFEKMLSHA-VRPDSIAFLEVLSACSHGGLVSEGLRYFN 489
++W +II YA +G + E+IE++ M + + ++ VL ACS G + +G++
Sbjct: 416 ISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHG 475
Query: 490 LMISDYHILPDSEHYTCLTDLLGRVGLLVEAYDLLASMP 528
++ + L D T L D+ G+ G L +A L +P
Sbjct: 476 RLLKNGLYL-DVFVVTSLADMYGKCGRLEDALSLFYQIP 513
Score = 192 bits (489), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 124/414 (29%), Positives = 214/414 (51%), Gaps = 16/414 (3%)
Query: 70 LKVSAKFGFLQQGKQLHSHIMKLGLCNKLSLQNQVLHVYVKCKAFDDMEKLFDEMRVRNI 129
L + G +G +HS+ +K GL ++L + N+++ +Y + D +K+FD M VR++
Sbjct: 254 LSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDL 313
Query: 130 VTWNTLISG--IINCGGNVTPYFRRMLLDNVRLDHITFNSLLRACVQADDIEVGRRLHSF 187
++WN++I + F+ M L ++ D +T SL Q DI R + F
Sbjct: 314 ISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGF 373
Query: 188 ILKVGFGL-NCFVSSALVDLYGKCGFVEDARRVFDEVLCRDLVLWNVMVSCYALNCLGDG 246
L+ G+ L + + +A+V +Y K G V+ AR VF+ + D++ WN ++S YA N
Sbjct: 374 TLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASE 433
Query: 247 AIAVFNLMRLEG-MKGDYFTFSSLVNSCGTLGSSKLGRQIHGLVIKQSFDLDVLVATSLV 305
AI ++N+M EG + + T+ S++ +C G+ + G ++HG ++K LDV V TSL
Sbjct: 434 AIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLA 493
Query: 306 DMYAKNGNIDDACRVFDGMTAKNVVSWNTMVVGFGQNGDGREAVKLLRDMLQGSFCPDEV 365
DMY K G ++DA +F + N V WNT++ G +G G +AV L ++ML PD +
Sbjct: 494 DMYGKCGRLEDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHI 553
Query: 366 TLASILSSCGSLSISCETRQ-VHAYAIKNGVQAFLSIENALINAYSKCGSIAGALQCFGS 424
T ++LS+C + E + G+ L +++ Y + G + AL+ S
Sbjct: 554 TFVTLLSACSHSGLVDEGQWCFEMMQTDYGITPSLKHYGCMVDMYGRAGQLETALKFIKS 613
Query: 425 VK-EPDLVTWTSIIGAYAFHG---LSKESIE-VFEKMLSHAVRPDSIAFLEVLS 473
+ +PD W +++ A HG L K + E +FE V P+ + + +LS
Sbjct: 614 MSLQPDASIWGALLSACRVHGNVDLGKIASEHLFE------VEPEHVGYHVLLS 661
Score = 158 bits (399), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 101/318 (31%), Positives = 170/318 (53%), Gaps = 17/318 (5%)
Query: 166 NSLLRACVQADDIEVGRRLHSFILKVGFGLNCFVSSALVDLYGKCGFVEDARRVFDEVLC 225
++L R C +++ + LH+ ++ N +S+ LV+LY G V AR FD +
Sbjct: 58 HTLFRYCT---NLQSAKCLHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQN 114
Query: 226 RDLVLWNVMVSCYALNCLGDGAIAVFNLMRL-EGMKGDYFTFSSLVNSCGTLGSSKLGRQ 284
RD+ WN+M+S Y I F+L L G+ DY TF S++ +C T+ G +
Sbjct: 115 RDVYAWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACRTVID---GNK 171
Query: 285 IHGLVIKQSFDLDVLVATSLVDMYAKNGNIDDACRVFDGMTAKNVVSWNTMVVGFGQNGD 344
IH L +K F DV VA SL+ +Y++ + +A +FD M +++ SWN M+ G+ Q+G+
Sbjct: 172 IHCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGN 231
Query: 345 GREAVKL---LRDMLQGSFCPDEVTLASILSSCGSLSISCETRQVHAYAIKNGVQAFLSI 401
+EA+ L LR M D VT+ S+LS+C +H+Y+IK+G+++ L +
Sbjct: 232 AKEALTLSNGLRAM-------DSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFV 284
Query: 402 ENALINAYSKCGSIAGALQCFGSVKEPDLVTWTSIIGAYAFHGLSKESIEVFEKMLSHAV 461
N LI+ Y++ G + + F + DL++W SII AY + +I +F++M +
Sbjct: 285 SNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRI 344
Query: 462 RPDSIAFLEVLSACSHGG 479
+PD + + + S S G
Sbjct: 345 QPDCLTLISLASILSQLG 362
Score = 90.5 bits (223), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 111/220 (50%), Gaps = 13/220 (5%)
Query: 268 SLVNSCGTLGSSKLGRQIHGLVIKQSFDLDVLVATSLVDMYAKNGNIDDACRVFDGMTAK 327
+L C L S+K +H ++ +V ++ LV++Y GN+ A FD + +
Sbjct: 59 TLFRYCTNLQSAKC---LHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNR 115
Query: 328 NVVSWNTMVVGFGQNGDGREAVKLLR-DMLQGSFCPDEVTLASILSSCGSLSISCETRQV 386
+V +WN M+ G+G+ G+ E ++ ML PD T S+L +C ++ + ++
Sbjct: 116 DVYAWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACRTV---IDGNKI 172
Query: 387 HAYAIKNGVQAFLSIENALINAYSKCGSIAGALQCFGSVKEPDLVTWTSIIGAYAFHGLS 446
H A+K G + + +LI+ YS+ ++ A F + D+ +W ++I Y G +
Sbjct: 173 HCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNA 232
Query: 447 KESIEVFEKMLSHAVRP-DSIAFLEVLSACSHGGLVSEGL 485
KE++ LS+ +R DS+ + +LSAC+ G + G+
Sbjct: 233 KEAL-----TLSNGLRAMDSVTVVSLLSACTEAGDFNRGV 267
>sp|Q9SS97|PP205_ARATH Putative pentatricopeptide repeat-containing protein At3g01580
OS=Arabidopsis thaliana GN=PCMP-E87 PE=3 SV=2
Length = 660
Score = 355 bits (910), Expect = 8e-97, Method: Compositional matrix adjust.
Identities = 190/571 (33%), Positives = 320/571 (56%), Gaps = 6/571 (1%)
Query: 69 ALKVSAKFGFLQQGKQLHSHIMK-LGLCNKLSLQNQVLHVYVKCKAFDDMEKLFDEMRVR 127
ALK + + G+ +H + K + L + L + + ++++Y+KC + ++FDE+
Sbjct: 66 ALKACGELREVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKP 125
Query: 128 NIVTWNTLISGIINCGG--NVTPYFRRMLL-DNVRLDHITFNSLLRACVQADDIEVGRRL 184
+IVTW++++SG G +FRRM++ +V D +T +L+ AC + + +GR +
Sbjct: 126 DIVTWSSMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCV 185
Query: 185 HSFILKVGFGLNCFVSSALVDLYGKCGFVEDARRVFDEVLCRDLVLWNVMVSCYALNCLG 244
H F+++ GF + + ++L++ Y K ++A +F + +D++ W+ +++CY N
Sbjct: 186 HGFVIRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAA 245
Query: 245 DGAIAVFNLMRLEGMKGDYFTFSSLVNSCGTLGSSKLGRQIHGLVIKQSFDLDVLVATSL 304
A+ VFN M +G + + T ++ +C + GR+ H L I++ + +V V+T+L
Sbjct: 246 AEALLVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVSTAL 305
Query: 305 VDMYAKNGNIDDACRVFDGMTAKNVVSWNTMVVGFGQNGDGREAVKLLRDML-QGSFCPD 363
VDMY K + ++A VF + K+VVSW ++ GF NG +++ ML + + PD
Sbjct: 306 VDMYMKCFSPEEAYAVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPD 365
Query: 364 EVTLASILSSCGSLSISCETRQVHAYAIKNGVQAFLSIENALINAYSKCGSIAGALQCFG 423
+ + +L SC L + + H+Y IK G + I +L+ YS+CGS+ A + F
Sbjct: 366 AILMVKVLGSCSELGFLEQAKCFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFN 425
Query: 424 SVKEPDLVTWTSIIGAYAFHGLSKESIEVFEKML-SHAVRPDSIAFLEVLSACSHGGLVS 482
+ D V WTS+I Y HG +++E F M+ S V+P+ + FL +LSACSH GL+
Sbjct: 426 GIALKDTVVWTSLITGYGIHGKGTKALETFNHMVKSSEVKPNEVTFLSILSACSHAGLIH 485
Query: 483 EGLRYFNLMISDYHILPDSEHYTCLTDLLGRVGLLVEAYDLLASMPIEPRSDTLGAFIGA 542
EGLR F LM++DY + P+ EHY L DLLGRVG L A ++ MP P LG +GA
Sbjct: 486 EGLRIFKLMVNDYRLAPNLEHYAVLVDLLGRVGDLDTAIEITKRMPFSPTPQILGTLLGA 545
Query: 543 CKVHGSIGLAKWAAEKLLELEPSKPVNYALVSNVYASERCWFDVARLRKMMRDNCDHKVP 602
C++H + +A+ A+KL ELE + Y L+SNVY + W +V +LR ++ K
Sbjct: 546 CRIHQNGEMAETVAKKLFELESNHAGYYMLMSNVYGVKGEWENVEKLRNSVKQRGIKKGL 605
Query: 603 GCSWIEIAGEIHTFVSSDRSHPQAVHMYAML 633
S IEI ++H FV+ D HP+ +Y +L
Sbjct: 606 AESLIEIRRKVHRFVADDELHPEKEPVYGLL 636
Score = 214 bits (545), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 133/447 (29%), Positives = 231/447 (51%), Gaps = 14/447 (3%)
Query: 111 CKAFD---DMEKLFDEMRVRNIVTWNTLISGIINCGG--NVTPYFRRMLLDNVRLDHITF 165
C+ F D ++F EM R++ WNTL+ + V +F M D + D+ T
Sbjct: 4 CRKFSSSVDARQMFGEMTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTL 63
Query: 166 NSLLRACVQADDIEVGRRLHSFILK-VGFGLNCFVSSALVDLYGKCGFVEDARRVFDEVL 224
L+AC + ++ G +H F+ K V G + +V S+L+ +Y KCG + +A R+FDE+
Sbjct: 64 PVALKACGELREVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELE 123
Query: 225 CRDLVLWNVMVSCYALNCLGDGAIAVFNLMRLEG-MKGDYFTFSSLVNSCGTLGSSKLGR 283
D+V W+ MVS + N A+ F M + + D T +LV++C L +S+LGR
Sbjct: 124 KPDIVTWSSMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGR 183
Query: 284 QIHGLVIKQSFDLDVLVATSLVDMYAKNGNIDDACRVFDGMTAKNVVSWNTMVVGFGQNG 343
+HG VI++ F D+ + SL++ YAK+ +A +F + K+V+SW+T++ + QNG
Sbjct: 184 CVHGFVIRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNG 243
Query: 344 DGREAVKLLRDMLQGSFCPDEVTLASILSSCGSLSISCETRQVHAYAIKNGVQAFLSIEN 403
EA+ + DM+ P+ T+ +L +C + + R+ H AI+ G++ + +
Sbjct: 244 AAAEALLVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVST 303
Query: 404 ALINAYSKCGSIAGALQCFGSVKEPDLVTWTSIIGAYAFHGLSKESIEVFEKM-LSHAVR 462
AL++ Y KC S A F + D+V+W ++I + +G++ SIE F M L + R
Sbjct: 304 ALVDMYMKCFSPEEAYAVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTR 363
Query: 463 PDSIAFLEVLSACSHGGLVSEGLRYFNLMISDYHILPDSEHYTCLTDLLGRVGLLVEAYD 522
PD+I ++VL +CS G + + + F+ + Y + L +L R G L A
Sbjct: 364 PDAILMVKVLGSCSELGFLEQA-KCFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASK 422
Query: 523 LLASMPIEPRSDTL--GAFIGACKVHG 547
+ + ++ DT+ + I +HG
Sbjct: 423 VFNGIALK---DTVVWTSLITGYGIHG 446
>sp|Q9LTV8|PP224_ARATH Pentatricopeptide repeat-containing protein At3g12770
OS=Arabidopsis thaliana GN=PCMP-H43 PE=2 SV=1
Length = 694
Score = 355 bits (910), Expect = 9e-97, Method: Compositional matrix adjust.
Identities = 185/549 (33%), Positives = 306/549 (55%), Gaps = 5/549 (0%)
Query: 81 QGKQLHSHIMKLGLCNKLSLQNQVLHVYVKCKAFDDMEKLFDEMRVRNIVTWNTLISGII 140
Q KQ+H+ ++ LGL L +++H ++FD++ I WN +I G
Sbjct: 36 QLKQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYS 95
Query: 141 --NCGGNVTPYFRRMLLDNVRLDHITFNSLLRACVQADDIEVGRRLHSFILKVGFGLNCF 198
N + + M L V D TF LL+AC +++GR +H+ + ++GF + F
Sbjct: 96 RNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVF 155
Query: 199 VSSALVDLYGKCGFVEDARRVFDEVLC--RDLVLWNVMVSCYALNCLGDGAIAVFNLMRL 256
V + L+ LY KC + AR VF+ + R +V W +VS YA N A+ +F+ MR
Sbjct: 156 VQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRK 215
Query: 257 EGMKGDYFTFSSLVNSCGTLGSSKLGRQIHGLVIKQSFDLDVLVATSLVDMYAKNGNIDD 316
+K D+ S++N+ L K GR IH V+K +++ + SL MYAK G +
Sbjct: 216 MDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVAT 275
Query: 317 ACRVFDGMTAKNVVSWNTMVVGFGQNGDGREAVKLLRDMLQGSFCPDEVTLASILSSCGS 376
A +FD M + N++ WN M+ G+ +NG REA+ + +M+ PD +++ S +S+C
Sbjct: 276 AKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQ 335
Query: 377 LSISCETRQVHAYAIKNGVQAFLSIENALINAYSKCGSIAGALQCFGSVKEPDLVTWTSI 436
+ + R ++ Y ++ + + I +ALI+ ++KCGS+ GA F + D+V W+++
Sbjct: 336 VGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAM 395
Query: 437 IGAYAFHGLSKESIEVFEKMLSHAVRPDSIAFLEVLSACSHGGLVSEGLRYFNLMISDYH 496
I Y HG ++E+I ++ M V P+ + FL +L AC+H G+V EG +FN M +D+
Sbjct: 396 IVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRM-ADHK 454
Query: 497 ILPDSEHYTCLTDLLGRVGLLVEAYDLLASMPIEPRSDTLGAFIGACKVHGSIGLAKWAA 556
I P +HY C+ DLLGR G L +AY+++ MP++P GA + ACK H + L ++AA
Sbjct: 455 INPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVELGEYAA 514
Query: 557 EKLLELEPSKPVNYALVSNVYASERCWFDVARLRKMMRDNCDHKVPGCSWIEIAGEIHTF 616
++L ++PS +Y +SN+YA+ R W VA +R M++ +K GCSW+E+ G + F
Sbjct: 515 QQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKGLNKDVGCSWVEVRGRLEAF 574
Query: 617 VSSDRSHPQ 625
D+SHP+
Sbjct: 575 RVGDKSHPR 583
>sp|Q9ZQ74|PP146_ARATH Pentatricopeptide repeat-containing protein At2g03380,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E47 PE=3
SV=1
Length = 689
Score = 354 bits (909), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 193/548 (35%), Positives = 314/548 (57%), Gaps = 8/548 (1%)
Query: 66 YSQALKVSAKFGFLQQGKQLHSHIMKLGLCNKLSLQNQVLHVYVKCKAFDDMEKLFDEMR 125
+S+ALK + L GK++H ++K+ + + L +L +Y KC K+F+++
Sbjct: 145 FSKALKACTELQDLDNGKKIHCQLVKVPSFDNVVLTG-LLDMYAKCGEIKSAHKVFNDIT 203
Query: 126 VRNIVTWNTLISGIIN---CGGNVTPYFRRMLLDNVRLDHITFNSLLRACVQADDIEVGR 182
+RN+V W ++I+G + C + F RM +NV + T+ +L+ AC + + G+
Sbjct: 204 LRNVVCWTSMIAGYVKNDLCEEGLV-LFNRMRENNVLGNEYTYGTLIMACTKLSALHQGK 262
Query: 183 RLHSFILKVGFGLNCFVSSALVDLYGKCGFVEDARRVFDEVLCRDLVLWNVMVSCYALNC 242
H ++K G L+ + ++L+D+Y KCG + +ARRVF+E DLV+W M+ Y N
Sbjct: 263 WFHGCLVKSGIELSSCLVTSLLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNG 322
Query: 243 LGDGAIAVFNLMRLEGMKGDYFTFSSLVNSCGTLGSSKLGRQIHGLVIKQSFDLDVLVAT 302
+ A+++F M+ +K + T +S+++ CG + + +LGR +HGL IK D VA
Sbjct: 323 SVNEALSLFQKMKGVEIKPNCVTIASVLSGCGLIENLELGRSVHGLSIKVGI-WDTNVAN 381
Query: 303 SLVDMYAKNGNIDDACRVFDGMTAKNVVSWNTMVVGFGQNGDGREAVKLLRDMLQGSFCP 362
+LV MYAK DA VF+ + K++V+WN+++ GF QNG EA+ L M S P
Sbjct: 382 ALVHMYAKCYQNRDAKYVFEMESEKDIVAWNSIISGFSQNGSIHEALFLFHRMNSESVTP 441
Query: 363 DEVTLASILSSCGSLSISCETRQVHAYAIKNGVQAFLSIE--NALINAYSKCGSIAGALQ 420
+ VT+AS+ S+C SL +HAY++K G A S+ AL++ Y+KCG A
Sbjct: 442 NGVTVASLFSACASLGSLAVGSSLHAYSVKLGFLASSSVHVGTALLDFYAKCGDPQSARL 501
Query: 421 CFGSVKEPDLVTWTSIIGAYAFHGLSKESIEVFEKMLSHAVRPDSIAFLEVLSACSHGGL 480
F +++E + +TW+++IG Y G + S+E+FE+ML +P+ F +LSAC H G+
Sbjct: 502 IFDTIEEKNTITWSAMIGGYGKQGDTIGSLELFEEMLKKQQKPNESTFTSILSACGHTGM 561
Query: 481 VSEGLRYFNLMISDYHILPDSEHYTCLTDLLGRVGLLVEAYDLLASMPIEPRSDTLGAFI 540
V+EG +YF+ M DY+ P ++HYTC+ D+L R G L +A D++ MPI+P GAF+
Sbjct: 562 VNEGKKYFSSMYKDYNFTPSTKHYTCMVDMLARAGELEQALDIIEKMPIQPDVRCFGAFL 621
Query: 541 GACKVHGSIGLAKWAAEKLLELEPSKPVNYALVSNVYASERCWFDVARLRKMMRDNCDHK 600
C +H L + +K+L+L P Y LVSN+YAS+ W +R +M+ K
Sbjct: 622 HGCGMHSRFDLGEIVIKKMLDLHPDDASYYVLVSNLYASDGRWNQAKEVRNLMKQRGLSK 681
Query: 601 VPGCSWIE 608
+ G S +E
Sbjct: 682 IAGHSTME 689
Score = 209 bits (532), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 120/404 (29%), Positives = 215/404 (53%), Gaps = 4/404 (0%)
Query: 83 KQLHSHIMKLGLCNKLSLQNQVLHVYVKCKAFDDMEKLFDEMRVRNIVTWNTLISG--II 140
+Q H + GL +S+ +++ +Y D +FD++ + W ++ +
Sbjct: 61 RQSHGVLTGNGLMGDISIATKLVSLYGFFGYTKDARLVFDQIPEPDFYLWKVMLRCYCLN 120
Query: 141 NCGGNVTPYFRRMLLDNVRLDHITFNSLLRACVQADDIEVGRRLHSFILKVGFGLNCFVS 200
V + ++ R D I F+ L+AC + D++ G+++H ++KV + V
Sbjct: 121 KESVEVVKLYDLLMKHGFRYDDIVFSKALKACTELQDLDNGKKIHCQLVKVP-SFDNVVL 179
Query: 201 SALVDLYGKCGFVEDARRVFDEVLCRDLVLWNVMVSCYALNCLGDGAIAVFNLMRLEGMK 260
+ L+D+Y KCG ++ A +VF+++ R++V W M++ Y N L + + +FN MR +
Sbjct: 180 TGLLDMYAKCGEIKSAHKVFNDITLRNVVCWTSMIAGYVKNDLCEEGLVLFNRMRENNVL 239
Query: 261 GDYFTFSSLVNSCGTLGSSKLGRQIHGLVIKQSFDLDVLVATSLVDMYAKNGNIDDACRV 320
G+ +T+ +L+ +C L + G+ HG ++K +L + TSL+DMY K G+I +A RV
Sbjct: 240 GNEYTYGTLIMACTKLSALHQGKWFHGCLVKSGIELSSCLVTSLLDMYVKCGDISNARRV 299
Query: 321 FDGMTAKNVVSWNTMVVGFGQNGDGREAVKLLRDMLQGSFCPDEVTLASILSSCGSLSIS 380
F+ + ++V W M+VG+ NG EA+ L + M P+ VT+AS+LS CG +
Sbjct: 300 FNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVEIKPNCVTIASVLSGCGLIENL 359
Query: 381 CETRQVHAYAIKNGVQAFLSIENALINAYSKCGSIAGALQCFGSVKEPDLVTWTSIIGAY 440
R VH +IK G+ ++ NAL++ Y+KC A F E D+V W SII +
Sbjct: 360 ELGRSVHGLSIKVGIWD-TNVANALVHMYAKCYQNRDAKYVFEMESEKDIVAWNSIISGF 418
Query: 441 AFHGLSKESIEVFEKMLSHAVRPDSIAFLEVLSACSHGGLVSEG 484
+ +G E++ +F +M S +V P+ + + SAC+ G ++ G
Sbjct: 419 SQNGSIHEALFLFHRMNSESVTPNGVTVASLFSACASLGSLAVG 462
Score = 174 bits (441), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 97/308 (31%), Positives = 162/308 (52%), Gaps = 4/308 (1%)
Query: 168 LLRACVQADDIEVGRRLHSFILKVGFGLNCFVSSALVDLYGKCGFVEDARRVFDEVLCRD 227
LL C D + R+ H + G + +++ LV LYG G+ +DAR VFD++ D
Sbjct: 50 LLSKCTNIDSL---RQSHGVLTGNGLMGDISIATKLVSLYGFFGYTKDARLVFDQIPEPD 106
Query: 228 LVLWNVMVSCYALNCLGDGAIAVFNLMRLEGMKGDYFTFSSLVNSCGTLGSSKLGRQIHG 287
LW VM+ CY LN + +++L+ G + D FS + +C L G++IH
Sbjct: 107 FYLWKVMLRCYCLNKESVEVVKLYDLLMKHGFRYDDIVFSKALKACTELQDLDNGKKIHC 166
Query: 288 LVIKQSFDLDVLVATSLVDMYAKNGNIDDACRVFDGMTAKNVVSWNTMVVGFGQNGDGRE 347
++K D +V T L+DMYAK G I A +VF+ +T +NVV W +M+ G+ +N E
Sbjct: 167 QLVKVP-SFDNVVLTGLLDMYAKCGEIKSAHKVFNDITLRNVVCWTSMIAGYVKNDLCEE 225
Query: 348 AVKLLRDMLQGSFCPDEVTLASILSSCGSLSISCETRQVHAYAIKNGVQAFLSIENALIN 407
+ L M + + +E T +++ +C LS + + H +K+G++ + +L++
Sbjct: 226 GLVLFNRMRENNVLGNEYTYGTLIMACTKLSALHQGKWFHGCLVKSGIELSSCLVTSLLD 285
Query: 408 AYSKCGSIAGALQCFGSVKEPDLVTWTSIIGAYAFHGLSKESIEVFEKMLSHAVRPDSIA 467
Y KCG I+ A + F DLV WT++I Y +G E++ +F+KM ++P+ +
Sbjct: 286 MYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVEIKPNCVT 345
Query: 468 FLEVLSAC 475
VLS C
Sbjct: 346 IASVLSGC 353
Score = 56.2 bits (134), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 50/107 (46%), Gaps = 3/107 (2%)
Query: 370 ILSSCGSLSISCETRQVHAYAIKNGVQAFLSIENALINAYSKCGSIAGALQCFGSVKEPD 429
+LS C ++ RQ H NG+ +SI L++ Y G A F + EPD
Sbjct: 50 LLSKCTNID---SLRQSHGVLTGNGLMGDISIATKLVSLYGFFGYTKDARLVFDQIPEPD 106
Query: 430 LVTWTSIIGAYAFHGLSKESIEVFEKMLSHAVRPDSIAFLEVLSACS 476
W ++ Y + S E +++++ ++ H R D I F + L AC+
Sbjct: 107 FYLWKVMLRCYCLNKESVEVVKLYDLLMKHGFRYDDIVFSKALKACT 153
>sp|Q9SS60|PP210_ARATH Pentatricopeptide repeat-containing protein At3g03580
OS=Arabidopsis thaliana GN=PCMP-H23 PE=2 SV=1
Length = 882
Score = 353 bits (907), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 199/611 (32%), Positives = 331/611 (54%), Gaps = 27/611 (4%)
Query: 58 STHSAHSFYSQALK-------------------VSAKFGFL---QQGKQLHSHIMKLGLC 95
S +S+H +Y +AL+ V FG L +QG+ LH +K G+
Sbjct: 180 SGYSSHGYYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVN 239
Query: 96 NKLSLQNQVLHVYVKCKAFDDMEKLFDEMRVRNIVTWNTLISGIINCGGNVTPYFRRMLL 155
+ + + N ++ +Y+K + D ++FDEM VR+ V++NT+I G + + RM L
Sbjct: 240 SVVVVNNGLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKL--EMVEESVRMFL 297
Query: 156 DNV---RLDHITFNSLLRACVQADDIEVGRRLHSFILKVGFGLNCFVSSALVDLYGKCGF 212
+N+ + D +T +S+LRAC D+ + + +++++LK GF L V + L+D+Y KCG
Sbjct: 298 ENLDQFKPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGD 357
Query: 213 VEDARRVFDEVLCRDLVLWNVMVSCYALNCLGDGAIAVFNLMRLEGMKGDYFTFSSLVNS 272
+ AR VF+ + C+D V WN ++S Y + A+ +F +M + + D+ T+ L++
Sbjct: 358 MITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISV 417
Query: 273 CGTLGSSKLGRQIHGLVIKQSFDLDVLVATSLVDMYAKNGNIDDACRVFDGMTAKNVVSW 332
L K G+ +H IK +D+ V+ +L+DMYAK G + D+ ++F M + V+W
Sbjct: 418 STRLADLKFGKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTW 477
Query: 333 NTMVVGFGQNGDGREAVKLLRDMLQGSFCPDEVTLASILSSCGSLSISCETRQVHAYAIK 392
NT++ + GD +++ M + PD T L C SL+ +++H ++
Sbjct: 478 NTVISACVRFGDFATGLQVTTQMRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLR 537
Query: 393 NGVQAFLSIENALINAYSKCGSIAGALQCFGSVKEPDLVTWTSIIGAYAFHGLSKESIEV 452
G ++ L I NALI YSKCG + + + F + D+VTWT +I AY +G ++++E
Sbjct: 538 FGYESELQIGNALIEMYSKCGCLENSSRVFERMSRRDVVTWTGMIYAYGMYGEGEKALET 597
Query: 453 FEKMLSHAVRPDSIAFLEVLSACSHGGLVSEGLRYFNLMISDYHILPDSEHYTCLTDLLG 512
F M + PDS+ F+ ++ ACSH GLV EGL F M + Y I P EHY C+ DLL
Sbjct: 598 FADMEKSGIVPDSVVFIAIIYACSHSGLVDEGLACFEKMKTHYKIDPMIEHYACVVDLLS 657
Query: 513 RVGLLVEAYDLLASMPIEPRSDTLGAFIGACKVHGSIGLAKWAAEKLLELEPSKPVNYAL 572
R + +A + + +MPI+P + + + AC+ G + A+ + +++EL P P L
Sbjct: 658 RSQKISKAEEFIQAMPIKPDASIWASVLRACRTSGDMETAERVSRRIIELNPDDPGYSIL 717
Query: 573 VSNVYASERCWFDVARLRKMMRDNCDHKVPGCSWIEIAGEIHTFVSSDRSHPQAVHMYAM 632
SN YA+ R W V+ +RK ++D K PG SWIE+ +H F S D S PQ+ +Y
Sbjct: 718 ASNAYAALRKWDKVSLIRKSLKDKHITKNPGYSWIEVGKNVHVFSSGDDSAPQSEAIYKS 777
Query: 633 LCTVFGLMEEN 643
L ++ LM +
Sbjct: 778 LEILYSLMAKE 788
Score = 198 bits (504), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 131/438 (29%), Positives = 230/438 (52%), Gaps = 14/438 (3%)
Query: 59 THSAHSFYSQALKVSAKFGFLQQGKQLHSHIMKLGLCNKLSLQNQVLHVYVKCKAFDDME 118
T + F S+AL S+ L + +++H+ ++ LGL + +++ Y +
Sbjct: 3 TRVSSPFISRALSSSSN---LNELRRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSL 59
Query: 119 KLFDEMR-VRNIVTWNTLISGIINCG--GNVTPYFRRMLLDNVRLDHITFNSLLRACVQA 175
+F + +N+ WN++I G ++ ++ V D TF S+++AC
Sbjct: 60 SVFRRVSPAKNVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGL 119
Query: 176 DDIEVGRRLHSFILKVGFGLNCFVSSALVDLYGKCGFVEDARRVFDEVLCRDLVLWNVMV 235
D E+G ++ IL +GF + FV +ALVD+Y + G + AR+VFDE+ RDLV WN ++
Sbjct: 120 FDAEMGDLVYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLI 179
Query: 236 SCYALNCLGDGAIAVFNLMRLEGMKGDYFTFSSLVNSCGTLGSSKLGRQIHGLVIKQSFD 295
S Y+ + + A+ +++ ++ + D FT SS++ + G L K G+ +HG +K +
Sbjct: 180 SGYSSHGYYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVN 239
Query: 296 LDVLVATSLVDMYAKNGNIDDACRVFDGMTAKNVVSWNTMVVGFGQNGDGREAVKLLRDM 355
V+V LV MY K DA RVFD M ++ VS+NTM+ G+ + E+V++ +
Sbjct: 240 SVVVVNNGLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLEN 299
Query: 356 LQGSFCPDEVTLASILSSCGSLSISCETRQVHAYAIKNGVQAFLSIENALINAYSKCGSI 415
L F PD +T++S+L +CG L + ++ Y +K G ++ N LI+ Y+KCG +
Sbjct: 300 LD-QFKPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDM 358
Query: 416 AGALQCFGSVKEPDLVTWTSIIGAYAFHGLSKESIEVFEKMLSHAVRPDSIAFLEVLSAC 475
A F S++ D V+W SII Y G E++++F+ M+ + D I +L ++S
Sbjct: 359 ITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVS 418
Query: 476 SH-------GGLVSEGLR 486
+ GL S G++
Sbjct: 419 TRLADLKFGKGLHSNGIK 436
Score = 150 bits (378), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 95/359 (26%), Positives = 187/359 (52%), Gaps = 3/359 (0%)
Query: 170 RACVQADDIEVGRRLHSFILKVGFGLNCFVSSALVDLYGKCGFVEDARRVFDEV-LCRDL 228
RA + ++ RR+H+ ++ +G + F S L+D Y + VF V +++
Sbjct: 12 RALSSSSNLNELRRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRVSPAKNV 71
Query: 229 VLWNVMVSCYALNCLGDGAIAVFNLMRLEGMKGDYFTFSSLVNSCGTLGSSKLGRQIHGL 288
LWN ++ ++ N L A+ + +R + D +TF S++ +C L +++G ++
Sbjct: 72 YLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVYEQ 131
Query: 289 VIKQSFDLDVLVATSLVDMYAKNGNIDDACRVFDGMTAKNVVSWNTMVVGFGQNGDGREA 348
++ F+ D+ V +LVDMY++ G + A +VFD M +++VSWN+++ G+ +G EA
Sbjct: 132 ILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEA 191
Query: 349 VKLLRDMLQGSFCPDEVTLASILSSCGSLSISCETRQVHAYAIKNGVQAFLSIENALINA 408
+++ ++ PD T++S+L + G+L + + + +H +A+K+GV + + + N L+
Sbjct: 192 LEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNGLVAM 251
Query: 409 YSKCGSIAGALQCFGSVKEPDLVTWTSIIGAYAFHGLSKESIEVFEKMLSHAVRPDSIAF 468
Y K A + F + D V++ ++I Y + +ES+ +F + L +PD +
Sbjct: 252 YLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLENLDQ-FKPDLLTV 310
Query: 469 LEVLSACSHGGLVSEGLRYFNLMISDYHILPDSEHYTCLTDLLGRVGLLVEAYDLLASM 527
VL AC H +S +N M+ +L +S L D+ + G ++ A D+ SM
Sbjct: 311 SSVLRACGHLRDLSLAKYIYNYMLKAGFVL-ESTVRNILIDVYAKCGDMITARDVFNSM 368
Score = 62.8 bits (151), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 76/170 (44%), Gaps = 17/170 (10%)
Query: 367 LASILSSCGSLSISCETRQVHAYAIKNGVQAFLSIENALINAYSKCGSIAGALQCFGSVK 426
++ LSS +L+ E R++HA I G+ + LI+ YS A +L F V
Sbjct: 10 ISRALSSSSNLN---ELRRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRVS 66
Query: 427 E-PDLVTWTSIIGAYAFHGLSKESIEVFEKMLSHAVRPDSIAFLEVLSACS------HGG 479
++ W SII A++ +GL E++E + K+ V PD F V+ AC+ G
Sbjct: 67 PAKNVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGD 126
Query: 480 LVSEGLRYFNLMISDYHILPDSEHYTCLTDLLGRVGLLVEAYDLLASMPI 529
LV E I D D L D+ R+GLL A + MP+
Sbjct: 127 LVYE-------QILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPV 169
>sp|Q9M1V3|PP296_ARATH Pentatricopeptide repeat-containing protein At3g63370
OS=Arabidopsis thaliana GN=PCMP-H83 PE=2 SV=2
Length = 960
Score = 353 bits (907), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 191/576 (33%), Positives = 319/576 (55%), Gaps = 4/576 (0%)
Query: 69 ALKVSAKFGFLQQGKQLHSHIMKLGL-CNKLSLQNQVLHVYVKCKAFDDMEKLFDEMRVR 127
AL F + + GK++H+ ++K ++L + N ++ +Y +C E++ +M
Sbjct: 290 ALTACDGFSYAKLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNA 349
Query: 128 NIVTWNTLISGIIN--CGGNVTPYFRRMLLDNVRLDHITFNSLLRACVQADDIEVGRRLH 185
++VTWN+LI G + +F M+ + D ++ S++ A + ++ G LH
Sbjct: 350 DVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELH 409
Query: 186 SFILKVGFGLNCFVSSALVDLYGKCGFVEDARRVFDEVLCRDLVLWNVMVSCYALNCLGD 245
++++K G+ N V + L+D+Y KC R F + +DL+ W +++ YA N
Sbjct: 410 AYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHV 469
Query: 246 GAIAVFNLMRLEGMKGDYFTFSSLVNSCGTLGSSKLGRQIHGLVIKQSFDLDVLVATSLV 305
A+ +F + + M+ D S++ + L S + ++IH ++++ LD ++ LV
Sbjct: 470 EALELFRDVAKKRMEIDEMILGSILRASSVLKSMLIVKEIHCHILRKGL-LDTVIQNELV 528
Query: 306 DMYAKNGNIDDACRVFDGMTAKNVVSWNTMVVGFGQNGDGREAVKLLRDMLQGSFCPDEV 365
D+Y K N+ A RVF+ + K+VVSW +M+ NG+ EAV+L R M++ D V
Sbjct: 529 DVYGKCRNMGYATRVFESIKGKDVVSWTSMISSSALNGNESEAVELFRRMVETGLSADSV 588
Query: 366 TLASILSSCGSLSISCETRQVHAYAIKNGVQAFLSIENALINAYSKCGSIAGALQCFGSV 425
L ILS+ SLS + R++H Y ++ G SI A+++ Y+ CG + A F +
Sbjct: 589 ALLCILSAAASLSALNKGREIHCYLLRKGFCLEGSIAVAVVDMYACCGDLQSAKAVFDRI 648
Query: 426 KEPDLVTWTSIIGAYAFHGLSKESIEVFEKMLSHAVRPDSIAFLEVLSACSHGGLVSEGL 485
+ L+ +TS+I AY HG K ++E+F+KM V PD I+FL +L ACSH GL+ EG
Sbjct: 649 ERKGLLQYTSMINAYGMHGCGKAAVELFDKMRHENVSPDHISFLALLYACSHAGLLDEGR 708
Query: 486 RYFNLMISDYHILPDSEHYTCLTDLLGRVGLLVEAYDLLASMPIEPRSDTLGAFIGACKV 545
+ +M +Y + P EHY CL D+LGR +VEA++ + M EP ++ A + AC+
Sbjct: 709 GFLKIMEHEYELEPWPEHYVCLVDMLGRANCVVEAFEFVKMMKTEPTAEVWCALLAACRS 768
Query: 546 HGSIGLAKWAAEKLLELEPSKPVNYALVSNVYASERCWFDVARLRKMMRDNCDHKVPGCS 605
H + + AA++LLELEP P N LVSNV+A + W DV ++R M+ + K PGCS
Sbjct: 769 HSEKEIGEIAAQRLLELEPKNPGNLVLVSNVFAEQGRWNDVEKVRAKMKASGMEKHPGCS 828
Query: 606 WIEIAGEIHTFVSSDRSHPQAVHMYAMLCTVFGLME 641
WIE+ G++H F + D+SHP++ +Y L V +E
Sbjct: 829 WIEMDGKVHKFTARDKSHPESKEIYEKLSEVTRKLE 864
Score = 228 bits (580), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 133/416 (31%), Positives = 225/416 (54%), Gaps = 5/416 (1%)
Query: 66 YSQALKVSAKFGFLQQGKQLHSHIMKLGLCNKLS-LQNQVLHVYVKCKAFDDMEKLFDEM 124
++ L++ K + QG+QLHS I K +L L +++ +Y KC + DD EK+FDEM
Sbjct: 83 FAYVLELCGKRRAVSQGRQLHSRIFKTFPSFELDFLAGKLVFMYGKCGSLDDAEKVFDEM 142
Query: 125 RVRNIVTWNTLISGIINCG--GNVTPYFRRMLLDNVRLDHITFNSLLRACVQADDIEVGR 182
R WNT+I ++ G + + M ++ V L +F +LL+AC + DI G
Sbjct: 143 PDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLRDIRSGS 202
Query: 183 RLHSFILKVGFGLNCFVSSALVDLYGKCGFVEDARRVFDEVLCR-DLVLWNVMVSCYALN 241
LHS ++K+G+ F+ +ALV +Y K + ARR+FD + D VLWN ++S Y+ +
Sbjct: 203 ELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYSTS 262
Query: 242 CLGDGAIAVFNLMRLEGMKGDYFTFSSLVNSCGTLGSSKLGRQIHGLVIKQS-FDLDVLV 300
+ +F M + G + +T S + +C +KLG++IH V+K S ++ V
Sbjct: 263 GKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSELYV 322
Query: 301 ATSLVDMYAKNGNIDDACRVFDGMTAKNVVSWNTMVVGFGQNGDGREAVKLLRDMLQGSF 360
+L+ MY + G + A R+ M +VV+WN+++ G+ QN +EA++ DM+
Sbjct: 323 CNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGH 382
Query: 361 CPDEVTLASILSSCGSLSISCETRQVHAYAIKNGVQAFLSIENALINAYSKCGSIAGALQ 420
DEV++ SI+++ G LS ++HAY IK+G + L + N LI+ YSKC +
Sbjct: 383 KSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGR 442
Query: 421 CFGSVKEPDLVTWTSIIGAYAFHGLSKESIEVFEKMLSHAVRPDSIAFLEVLSACS 476
F + + DL++WT++I YA + E++E+F + + D + +L A S
Sbjct: 443 AFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRASS 498
Score = 201 bits (511), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 155/572 (27%), Positives = 272/572 (47%), Gaps = 44/572 (7%)
Query: 64 SFYSQALKVSAKFGFLQQGKQLHSHIMKLGLCNKLSLQNQVLHVYVKCKAFDDMEKLFDE 123
S + LK AK ++ G +LHS ++KLG + + N ++ +Y K +LFD
Sbjct: 183 SSFPALLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDG 242
Query: 124 MRVR-NIVTWNTLISGIINCGGNVT--PYFRRMLLDNVRLDHITFNSLLRACVQADDIEV 180
+ + + V WN+++S G ++ FR M + + T S L AC ++
Sbjct: 243 FQEKGDAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKL 302
Query: 181 GRRLHSFILKVG-FGLNCFVSSALVDLYGKCGFVEDARRVFDEVLCRDLVLWNVMVSCYA 239
G+ +H+ +LK +V +AL+ +Y +CG + A R+ ++ D+V WN ++ Y
Sbjct: 303 GKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYV 362
Query: 240 LNCLGDGAIAVFNLMRLEGMKGDYFTFSSLVNSCGTLGSSKLGRQIHGLVIKQSFDLDVL 299
N + A+ F+ M G K D + +S++ + G L + G ++H VIK +D ++
Sbjct: 363 QNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQ 422
Query: 300 VATSLVDMYAKNGNIDDACRVFDGMTAKNVVSWNTMVVGFGQNGDGREAVKLLRDMLQGS 359
V +L+DMY+K R F M K+++SW T++ G+ QN EA++L RD+ +
Sbjct: 423 VGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKR 482
Query: 360 FCPDEVTLASILSSCGSLSISCETRQVHAYAIKNGVQAFLSIENALINAYSKCGSIAGAL 419
DE+ L SIL + L +++H + ++ G+ + I+N L++ Y KC ++ A
Sbjct: 483 MEIDEMILGSILRASSVLKSMLIVKEIHCHILRKGLLDTV-IQNELVDVYGKCRNMGYAT 541
Query: 420 QCFGSVKEPDLVTWTSIIGAYAFHGLSKESIEVFEKMLSHAVRPDSIAFLEVLSACSHGG 479
+ F S+K D+V+WTS+I + A +G E++E+F +M+ + DS+A L +LSA +
Sbjct: 542 RVFESIKGKDVVSWTSMISSSALNGNESEAVELFRRMVETGLSADSVALLCILSAAASLS 601
Query: 480 LVSEGLRYFNLMISDYHILPDS------EHYTCLTDL---------LGRVGLL------- 517
+++G ++ L S + Y C DL + R GLL
Sbjct: 602 ALNKGREIHCYLLRKGFCLEGSIAVAVVDMYACCGDLQSAKAVFDRIERKGLLQYTSMIN 661
Query: 518 -----------VEAYDLLASMPIEPRSDTLGAFIGACKVHGSI----GLAKWAAEKLLEL 562
VE +D + + P + A + AC G + G K E EL
Sbjct: 662 AYGMHGCGKAAVELFDKMRHENVSPDHISFLALLYACSHAGLLDEGRGFLK-IMEHEYEL 720
Query: 563 EPSKPVNYALVSNVYASERCWFDVARLRKMMR 594
EP P +Y + ++ C + KMM+
Sbjct: 721 EPW-PEHYVCLVDMLGRANCVVEAFEFVKMMK 751
Score = 182 bits (461), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 103/335 (30%), Positives = 180/335 (53%), Gaps = 5/335 (1%)
Query: 144 GNVTPYFRRMLLDNVRLDHITFNSLLRACVQADDIEVGRRLHSFILKV--GFGLNCFVSS 201
G +T F+R+ + F +L C + + GR+LHS I K F L+ F++
Sbjct: 62 GVLTEAFQRLDVSENNSPVEAFAYVLELCGKRRAVSQGRQLHSRIFKTFPSFELD-FLAG 120
Query: 202 ALVDLYGKCGFVEDARRVFDEVLCRDLVLWNVMVSCYALNCLGDGAIAVFNLMRLEGMKG 261
LV +YGKCG ++DA +VFDE+ R WN M+ Y N A+A++ MR+EG+
Sbjct: 121 KLVFMYGKCGSLDDAEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPL 180
Query: 262 DYFTFSSLVNSCGTLGSSKLGRQIHGLVIKQSFDLDVLVATSLVDMYAKNGNIDDACRVF 321
+F +L+ +C L + G ++H L++K + + +LV MYAKN ++ A R+F
Sbjct: 181 GLSSFPALLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLF 240
Query: 322 DGMTAK-NVVSWNTMVVGFGQNGDGREAVKLLRDMLQGSFCPDEVTLASILSSCGSLSIS 380
DG K + V WN+++ + +G E ++L R+M P+ T+ S L++C S +
Sbjct: 241 DGFQEKGDAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYA 300
Query: 381 CETRQVHAYAIKNGVQAF-LSIENALINAYSKCGSIAGALQCFGSVKEPDLVTWTSIIGA 439
+++HA +K+ + L + NALI Y++CG + A + + D+VTW S+I
Sbjct: 301 KLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKG 360
Query: 440 YAFHGLSKESIEVFEKMLSHAVRPDSIAFLEVLSA 474
Y + + KE++E F M++ + D ++ +++A
Sbjct: 361 YVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAA 395
Score = 113 bits (283), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 86/301 (28%), Positives = 139/301 (46%), Gaps = 10/301 (3%)
Query: 233 VMVSCYALNCLGDGAIAVFNLMRLEGMKGDYFTFSSLVNSCGTLGSSKLGRQIHGLVIKQ 292
V V L C F + + F+ ++ CG + GRQ+H + K
Sbjct: 50 VQVPSPKLACFDGVLTEAFQRLDVSENNSPVEAFAYVLELCGKRRAVSQGRQLHSRIFKT 109
Query: 293 --SFDLDVLVATSLVDMYAKNGNIDDACRVFDGMTAKNVVSWNTMVVGFGQNGDGREAVK 350
SF+LD L A LV MY K G++DDA +VFD M + +WNTM+ + NG+ A+
Sbjct: 110 FPSFELDFL-AGKLVFMYGKCGSLDDAEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALA 168
Query: 351 LLRDMLQGSFCPDEVTLASILSSCGSLSISCETRQVHAYAIKNGVQAFLSIENALINAYS 410
L +M + ++L +C L ++H+ +K G + I NAL++ Y+
Sbjct: 169 LYWNMRVEGVPLGLSSFPALLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYA 228
Query: 411 KCGSIAGALQCFGSVKEP-DLVTWTSIIGAYAFHGLSKESIEVFEKMLSHAVRPDSIAFL 469
K ++ A + F +E D V W SI+ +Y+ G S E++E+F +M P+S +
Sbjct: 229 KNDDLSAARRLFDGFQEKGDAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIV 288
Query: 470 EVLSACSHGGLVSEGLR-YFNLMISDYHILPDSEHYTC--LTDLLGRVGLLVEAYDLLAS 526
L+AC G + +++ S H SE Y C L + R G + +A +L
Sbjct: 289 SALTACDGFSYAKLGKEIHASVLKSSTH---SSELYVCNALIAMYTRCGKMPQAERILRQ 345
Query: 527 M 527
M
Sbjct: 346 M 346
>sp|Q9LZ19|PP364_ARATH Pentatricopeptide repeat-containing protein At5g04780
OS=Arabidopsis thaliana GN=PCMP-H16 PE=2 SV=2
Length = 635
Score = 353 bits (906), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 176/461 (38%), Positives = 286/461 (62%), Gaps = 2/461 (0%)
Query: 166 NSLLRACVQADDIEVGRRLHSFILKVGFGLNCFVSSALVDLYGKCGFVEDARRVFDEVLC 225
+ +L+ C + + + H I+++ + + + L++ Y KCGFVE AR+VFD +L
Sbjct: 65 HEILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLE 124
Query: 226 RDLVLWNVMVSCYALNCLGDGAIAVFNLMRLEGMKGDYFTFSSLVNSCGTLGSSKLGRQI 285
R LV WN M+ Y N + A+ +F MR EG K FT SS++++CG + +++
Sbjct: 125 RSLVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALECKKL 184
Query: 286 HGLVIKQSFDLDVLVATSLVDMYAKNGNIDDACRVFDGMTAKNVVSWNTMVVGFGQNGDG 345
H L +K DL++ V T+L+D+YAK G I DA +VF+ M K+ V+W++MV G+ QN +
Sbjct: 185 HCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNY 244
Query: 346 REAVKLLRDMLQGSFCPDEVTLASILSSCGSLSISCETRQVHAYAIKNGVQAFLSIENAL 405
EA+ L R + S ++ TL+S++ +C +L+ E +Q+HA K+G + + + ++
Sbjct: 245 EEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVASSA 304
Query: 406 INAYSKCGSIAGALQCFGSVKEPDLVTWTSIIGAYAFHGLSKESIEVFEKMLSHAVRPDS 465
++ Y+KCGS+ + F V+E +L W +II +A H KE + +FEKM + P+
Sbjct: 305 VDMYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNE 364
Query: 466 IAFLEVLSACSHGGLVSEGLRYFNLMISDYHILPDSEHYTCLTDLLGRVGLLVEAYDLLA 525
+ F +LS C H GLV EG R+F LM + Y + P+ HY+C+ D+LGR GLL EAY+L+
Sbjct: 365 VTFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIK 424
Query: 526 SMPIEPRSDTLGAFIGACKVHGSIGLAKWAAEKLLELEPSKPVNYALVSNVYASERCWFD 585
S+P +P + G+ + +C+V+ ++ LA+ AAEKL ELEP N+ L+SN+YA+ + W +
Sbjct: 425 SIPFDPTASIWGSLLASCRVYKNLELAEVAAEKLFELEPENAGNHVLLSNIYAANKQWEE 484
Query: 586 VARLRKMMRDNCD-HKVPGCSWIEIAGEIHTFVSSDRSHPQ 625
+A+ RK++RD CD KV G SWI+I ++HTF + HP+
Sbjct: 485 IAKSRKLLRD-CDVKKVRGKSWIDIKDKVHTFSVGESGHPR 524
Score = 181 bits (459), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 117/416 (28%), Positives = 215/416 (51%), Gaps = 16/416 (3%)
Query: 35 TNAQKHDRSVLSS--QLRNSGTIHESTHSAHSFYSQALKVSAKFGFLQQGKQLHSHIMKL 92
T++ + SVL+S Q S + + S + + L++ A+ G + + K H I+++
Sbjct: 31 TSSLSRNISVLASYDQEEVSPGRYSNEFSNRNLVHEILQLCARNGAVMEAKACHGKIIRI 90
Query: 93 GLCNKLSLQNQVLHVYVKCKAFDDMEKLFDEMRVRNIVTWNTLISGIIN--CGGNVTPYF 150
L ++L N +++ Y KC + ++FD M R++V+WNT+I F
Sbjct: 91 DLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERSLVSWNTMIGLYTRNRMESEALDIF 150
Query: 151 RRMLLDNVRLDHITFNSLLRAC-VQADDIEVGRRLHSFILKVGFGLNCFVSSALVDLYGK 209
M + + T +S+L AC V D +E ++LH +K LN +V +AL+DLY K
Sbjct: 151 LEMRNEGFKFSEFTISSVLSACGVNCDALEC-KKLHCLSVKTCIDLNLYVGTALLDLYAK 209
Query: 210 CGFVEDARRVFDEVLCRDLVLWNVMVSCYALNCLGDGAIAVFNLMRLEGMKGDYFTFSSL 269
CG ++DA +VF+ + + V W+ MV+ Y N + A+ ++ + ++ + FT SS+
Sbjct: 210 CGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEEALLLYRRAQRMSLEQNQFTLSSV 269
Query: 270 VNSCGTLGSSKLGRQIHGLVIKQSFDLDVLVATSLVDMYAKNGNIDDACRVFDGMTAKNV 329
+ +C L + G+Q+H ++ K F +V VA+S VDMYAK G++ ++ +F + KN+
Sbjct: 270 ICACSNLAALIEGKQMHAVICKSGFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQEKNL 329
Query: 330 VSWNTMVVGFGQNGDGREAVKLLRDMLQGSFCPDEVTLASILSSCGSLSISCETRQVH-- 387
WNT++ GF ++ +E + L M Q P+EVT +S+LS CG + E R+
Sbjct: 330 ELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKL 389
Query: 388 ---AYAIKNGVQAFLSIENALINAYSKCGSIAGALQCFGSVK-EPDLVTWTSIIGA 439
Y + V + + +++ + G ++ A + S+ +P W S++ +
Sbjct: 390 MRTTYGLSPNVVHY----SCMVDILGRAGLLSEAYELIKSIPFDPTASIWGSLLAS 441
>sp|Q9FLZ9|PP405_ARATH Pentatricopeptide repeat-containing protein At5g39350
OS=Arabidopsis thaliana GN=PCMP-E16 PE=2 SV=1
Length = 677
Score = 353 bits (905), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 190/550 (34%), Positives = 301/550 (54%), Gaps = 6/550 (1%)
Query: 66 YSQALKVSAKFGFLQQGKQLHSHIMKLGLCNKLSLQNQVLHVYVKCKAFDDMEKLFDEMR 125
Y K + + ++ G +H I++ +QN +L +Y+ + +FD M+
Sbjct: 120 YPFVAKAAGELKSMKLGLVVHGRILRSWFGRDKYVQNALLAMYMNFGKVEMARDVFDVMK 179
Query: 126 VRNIVTWNTLISGIINCG--GNVTPYFRRMLLDNVRLDHITFNSLLRACVQADDIEVGRR 183
R++++WNT+ISG G + F M+ ++V LDH T S+L C D+E+GR
Sbjct: 180 NRDVISWNTMISGYYRNGYMNDALMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEMGRN 239
Query: 184 LHSFILKVGFGLNCFVSSALVDLYGKCGFVEDARRVFDEVLCRDLVLWNVMVSCYALNCL 243
+H + + G V +ALV++Y KCG +++AR VFD + RD++ W M++ Y +
Sbjct: 240 VHKLVEEKRLGDKIEVKNALVNMYLKCGRMDEARFVFDRMERRDVITWTCMINGYTEDGD 299
Query: 244 GDGAIAVFNLMRLEGMKGDYFTFSSLVNSCGTLGSSKLGRQIHGLVIKQSFDLDVLVATS 303
+ A+ + LM+ EG++ + T +SLV+ CG G+ +HG ++Q D+++ TS
Sbjct: 300 VENALELCRLMQFEGVRPNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQVYSDIIIETS 359
Query: 304 LVDMYAKNGNIDDACRVFDGMTAKNVVSWNTMVVGFGQNGDGREAVKLLRDMLQGSFCPD 363
L+ MYAK +D RVF G + + W+ ++ G QN +A+ L + M + P+
Sbjct: 360 LISMYAKCKRVDLCFRVFSGASKYHTGPWSAIIAGCVQNELVSDALGLFKRMRREDVEPN 419
Query: 364 EVTLASILSSCGSLSISCETRQVHAYAIKNGVQAFLSIENALINAYSKCGSIAGALQCFG 423
TL S+L + +L+ + +H Y K G + L L++ YSKCG++ A + F
Sbjct: 420 IATLNSLLPAYAALADLRQAMNIHCYLTKTGFMSSLDAATGLVHVYSKCGTLESAHKIFN 479
Query: 424 SVKEP----DLVTWTSIIGAYAFHGLSKESIEVFEKMLSHAVRPDSIAFLEVLSACSHGG 479
++E D+V W ++I Y HG +++VF +M+ V P+ I F L+ACSH G
Sbjct: 480 GIQEKHKSKDVVLWGALISGYGMHGDGHNALQVFMEMVRSGVTPNEITFTSALNACSHSG 539
Query: 480 LVSEGLRYFNLMISDYHILPDSEHYTCLTDLLGRVGLLVEAYDLLASMPIEPRSDTLGAF 539
LV EGL F M+ Y L S HYTC+ DLLGR G L EAY+L+ ++P EP S GA
Sbjct: 540 LVEEGLTLFRFMLEHYKTLARSNHYTCIVDLLGRAGRLDEAYNLITTIPFEPTSTVWGAL 599
Query: 540 IGACKVHGSIGLAKWAAEKLLELEPSKPVNYALVSNVYASERCWFDVARLRKMMRDNCDH 599
+ AC H ++ L + AA KL ELEP NY L++N+YA+ W D+ ++R MM +
Sbjct: 600 LAACVTHENVQLGEMAANKLFELEPENTGNYVLLANIYAALGRWKDMEKVRSMMENVGLR 659
Query: 600 KVPGCSWIEI 609
K PG S IEI
Sbjct: 660 KKPGHSTIEI 669
Score = 184 bits (466), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 130/489 (26%), Positives = 241/489 (49%), Gaps = 9/489 (1%)
Query: 66 YSQALKVSAKFGFLQQGKQLHSHIMKLGLCNKLSLQNQVLHVYVKCKAFDDMEKLFDEMR 125
Y L A + + K LH H++ G + L + Y C KLF+EM
Sbjct: 18 YQSLLNHFAATQSISKTKALHCHVITGGRVSGHILSTLSV-TYALCGHITYARKLFEEMP 76
Query: 126 VRNIVTWNTLISGIINCG--GNVTPYFRRMLLDNVRL--DHITFNSLLRACVQADDIEVG 181
+++++N +I + G + F RM+ + V+ D T+ + +A + +++G
Sbjct: 77 QSSLLSYNIVIRMYVREGLYHDAISVFIRMVSEGVKCVPDGYTYPFVAKAAGELKSMKLG 136
Query: 182 RRLHSFILKVGFGLNCFVSSALVDLYGKCGFVEDARRVFDEVLCRDLVLWNVMVSCYALN 241
+H IL+ FG + +V +AL+ +Y G VE AR VFD + RD++ WN M+S Y N
Sbjct: 137 LVVHGRILRSWFGRDKYVQNALLAMYMNFGKVEMARDVFDVMKNRDVISWNTMISGYYRN 196
Query: 242 CLGDGAIAVFNLMRLEGMKGDYFTFSSLVNSCGTLGSSKLGRQIHGLVIKQSFDLDVLVA 301
+ A+ +F+ M E + D+ T S++ CG L ++GR +H LV ++ + V
Sbjct: 197 GYMNDALMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEMGRNVHKLVEEKRLGDKIEVK 256
Query: 302 TSLVDMYAKNGNIDDACRVFDGMTAKNVVSWNTMVVGFGQNGDGREAVKLLRDMLQGSFC 361
+LV+MY K G +D+A VFD M ++V++W M+ G+ ++GD A++L R M
Sbjct: 257 NALVNMYLKCGRMDEARFVFDRMERRDVITWTCMINGYTEDGDVENALELCRLMQFEGVR 316
Query: 362 PDEVTLASILSSCGSLSISCETRQVHAYAIKNGVQAFLSIENALINAYSKCGSIAGALQC 421
P+ VT+AS++S CG + + +H +A++ V + + IE +LI+ Y+KC + +
Sbjct: 317 PNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQVYSDIIIETSLISMYAKCKRVDLCFRV 376
Query: 422 FGSVKEPDLVTWTSIIGAYAFHGLSKESIEVFEKMLSHAVRPDSIAFLEVLSACSHGGLV 481
F + W++II + L +++ +F++M V P+ +L A + +
Sbjct: 377 FSGASKYHTGPWSAIIAGCVQNELVSDALGLFKRMRREDVEPNIATLNSLLPAYAALADL 436
Query: 482 SEGLRYFNLMISDYHILPDSEHYTCLTDLLGRVGLLVEAYDLLASMPIEPRSDTL---GA 538
+ + + ++ + + T L + + G L A+ + + + +S + GA
Sbjct: 437 RQAMN-IHCYLTKTGFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQEKHKSKDVVLWGA 495
Query: 539 FIGACKVHG 547
I +HG
Sbjct: 496 LISGYGMHG 504
Score = 153 bits (386), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 97/397 (24%), Positives = 193/397 (48%), Gaps = 8/397 (2%)
Query: 55 IHESTHSAHSFYSQALKVSAKFGFLQQGKQLHSHIMKLGLCNKLSLQNQVLHVYVKCKAF 114
++ES H+ L V L+ G+ +H + + L +K+ ++N ++++Y+KC
Sbjct: 210 VNESVDLDHATIVSMLPVCGHLKDLEMGRNVHKLVEEKRLGDKIEVKNALVNMYLKCGRM 269
Query: 115 DDMEKLFDEMRVRNIVTWNTLISGIINCGG--NVTPYFRRMLLDNVRLDHITFNSLLRAC 172
D+ +FD M R+++TW +I+G G N R M + VR + +T SL+ C
Sbjct: 270 DEARFVFDRMERRDVITWTCMINGYTEDGDVENALELCRLMQFEGVRPNAVTIASLVSVC 329
Query: 173 VQADDIEVGRRLHSFILKVGFGLNCFVSSALVDLYGKCGFVEDARRVFDEVLCRDLVLWN 232
A + G+ LH + ++ + + ++L+ +Y KC V+ RVF W+
Sbjct: 330 GDALKVNDGKCLHGWAVRQQVYSDIIIETSLISMYAKCKRVDLCFRVFSGASKYHTGPWS 389
Query: 233 VMVSCYALNCLGDGAIAVFNLMRLEGMKGDYFTFSSLVNSCGTLGSSKLGRQIHGLVIKQ 292
+++ N L A+ +F MR E ++ + T +SL+ + L + IH + K
Sbjct: 390 AIIAGCVQNELVSDALGLFKRMRREDVEPNIATLNSLLPAYAALADLRQAMNIHCYLTKT 449
Query: 293 SFDLDVLVATSLVDMYAKNGNIDDACRVFDGM----TAKNVVSWNTMVVGFGQNGDGREA 348
F + AT LV +Y+K G ++ A ++F+G+ +K+VV W ++ G+G +GDG A
Sbjct: 450 GFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQEKHKSKDVVLWGALISGYGMHGDGHNA 509
Query: 349 VKLLRDMLQGSFCPDEVTLASILSSCGSLSISCETRQVHAYAIKN-GVQAFLSIENALIN 407
+++ +M++ P+E+T S L++C + E + + +++ A + +++
Sbjct: 510 LQVFMEMVRSGVTPNEITFTSALNACSHSGLVEEGLTLFRFMLEHYKTLARSNHYTCIVD 569
Query: 408 AYSKCGSIAGALQCFGSVK-EPDLVTWTSIIGAYAFH 443
+ G + A ++ EP W +++ A H
Sbjct: 570 LLGRAGRLDEAYNLITTIPFEPTSTVWGALLAACVTH 606
>sp|Q84MA3|PP345_ARATH Pentatricopeptide repeat-containing protein At4g32430,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E40 PE=2
SV=1
Length = 763
Score = 352 bits (904), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 195/585 (33%), Positives = 326/585 (55%), Gaps = 20/585 (3%)
Query: 77 GFLQQGKQLHSHIMKLGLCNKLSLQNQVLHVYVKCKAFDDMEKLFDEMRVRNIVTWNTLI 136
GFL G QL S ++K GL + L + N + +Y + +F ++FDEM +++++WN+L+
Sbjct: 189 GFLL-GLQLQSTVVKTGLESDLVVGNSFITMYSRSGSFRGARRVFDEMSFKDMISWNSLL 247
Query: 137 SGIINCGG---NVTPYFRRMLLDNVRLDHITFNSLLRACVQADDIEVGRRLHSFILKVGF 193
SG+ G FR M+ + V LDH++F S++ C D+++ R++H +K G+
Sbjct: 248 SGLSQEGTFGFEAVVIFRDMMREGVELDHVSFTSVITTCCHETDLKLARQIHGLCIKRGY 307
Query: 194 GLNCFVSSALVDLYGKCGFVEDARRVFDEVLCRDLVLWNVMVSCYALNCLGDGAIAVFNL 253
V + L+ Y KCG +E + VF ++ R++V W M+S D A+++F
Sbjct: 308 ESLLEVGNILMSRYSKCGVLEAVKSVFHQMSERNVVSWTTMISSNK-----DDAVSIFLN 362
Query: 254 MRLEGMKGDYFTFSSLVNSCGTLGSSKLGRQIHGLVIKQSFDLDVLVATSLVDMYAKNGN 313
MR +G+ + TF L+N+ K G +IHGL IK F + V S + +YAK
Sbjct: 363 MRFDGVYPNEVTFVGLINAVKCNEQIKEGLKIHGLCIKTGFVSEPSVGNSFITLYAKFEA 422
Query: 314 IDDACRVFDGMTAKNVVSWNTMVVGFGQNGDGREAVKLLRDMLQGSFCPDEVTLASILSS 373
++DA + F+ +T + ++SWN M+ GF QNG EA+K+ + P+E T S+L++
Sbjct: 423 LEDAKKAFEDITFREIISWNAMISGFAQNGFSHEALKMFLSAAAETM-PNEYTFGSVLNA 481
Query: 374 CG-SLSISCETRQ-VHAYAIKNGVQAFLSIENALINAYSKCGSIAGALQCFGSVKEPDLV 431
+ IS + Q HA+ +K G+ + + +AL++ Y+K G+I + + F + + +
Sbjct: 482 IAFAEDISVKQGQRCHAHLLKLGLNSCPVVSSALLDMYAKRGNIDESEKVFNEMSQKNQF 541
Query: 432 TWTSIIGAYAFHGLSKESIEVFEKMLSHAVRPDSIAFLEVLSACSHGGLVSEGLRYFNLM 491
WTSII AY+ HG + + +F KM+ V PD + FL VL+AC+ G+V +G FN+M
Sbjct: 542 VWTSIISAYSSHGDFETVMNLFHKMIKENVAPDLVTFLSVLTACNRKGMVDKGYEIFNMM 601
Query: 492 ISDYHILPDSEHYTCLTDLLGRVGLLVEAYDLLASMPIEPRSDTLGAFIGACKVHGSIGL 551
I Y++ P EHY+C+ D+LGR G L EA +L++ +P P L + +G+C++HG++ +
Sbjct: 602 IEVYNLEPSHEHYSCMVDMLGRAGRLKEAEELMSEVPGGPGESMLQSMLGSCRLHGNVKM 661
Query: 552 AKWAAEKLLELEPSKPVNYALVSNVYASERCWFDVARLRKMMRDNCDHKVPGCSWIEIAG 611
AE +E++P +Y + N+YA + W A +RK MR K G SWI++
Sbjct: 662 GAKVAELAMEMKPELSGSYVQMYNIYAEKEEWDKAAEIRKAMRKKNVSKEAGFSWIDVGD 721
Query: 612 -----EIHTFVSSDRSHPQAVHMYAMLCTVFGLMEENNVSGHCNV 651
+ F S D+SHP++ +Y M+ + GL E N+ G V
Sbjct: 722 TEGSLTMQGFSSGDKSHPKSDEIYRMV-EIIGL--EMNLEGKVAV 763
Score = 183 bits (464), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 119/410 (29%), Positives = 215/410 (52%), Gaps = 12/410 (2%)
Query: 70 LKVSAKFGFLQQGKQLHSHIMKLGLCNKLSLQNQVLHVYVKCKAFDDMEKLFDEMRVRNI 129
L + A G L++G Q+H G + + + N V+ +Y K FD+ +F+ + ++
Sbjct: 83 LALKACRGDLKRGCQIHGFSTTSGFTSFVCVSNAVMGMYRKAGRFDNALCIFENLVDPDV 142
Query: 130 VTWNTLISGIINCGGNVTPYFRRMLLDNVRLDHITFNSLLRACVQADDIEVGRRLHSFIL 189
V+WNT++SG + + RM V D T+++ L CV ++ +G +L S ++
Sbjct: 143 VSWNTILSGFDD-NQIALNFVVRMKSAGVVFDAFTYSTALSFCVGSEGFLLGLQLQSTVV 201
Query: 190 KVGFGLNCFVSSALVDLYGKCGFVEDARRVFDEVLCRDLVLWNVMVSCYALN-CLGDGAI 248
K G + V ++ + +Y + G ARRVFDE+ +D++ WN ++S + G A+
Sbjct: 202 KTGLESDLVVGNSFITMYSRSGSFRGARRVFDEMSFKDMISWNSLLSGLSQEGTFGFEAV 261
Query: 249 AVFNLMRLEGMKGDYFTFSSLVNSCGTLGSSKLGRQIHGLVIKQSFDLDVLVATSLVDMY 308
+F M EG++ D+ +F+S++ +C KL RQIHGL IK+ ++ + V L+ Y
Sbjct: 262 VIFRDMMREGVELDHVSFTSVITTCCHETDLKLARQIHGLCIKRGYESLLEVGNILMSRY 321
Query: 309 AKNGNIDDACRVFDGMTAKNVVSWNTMVVGFGQNGDGREAVKLLRDMLQGSFCPDEVTLA 368
+K G ++ VF M+ +NVVSW TM+ N D +AV + +M P+EVT
Sbjct: 322 SKCGVLEAVKSVFHQMSERNVVSWTTMI---SSNKD--DAVSIFLNMRFDGVYPNEVTFV 376
Query: 369 SILSSCGSLSISCETRQVHAYAIKNGVQAFLSIENALINAYSKCGSIAGALQCFGSVKEP 428
++++ E ++H IK G + S+ N+ I Y+K ++ A + F +
Sbjct: 377 GLINAVKCNEQIKEGLKIHGLCIKTGFVSEPSVGNSFITLYAKFEALEDAKKAFEDITFR 436
Query: 429 DLVTWTSIIGAYAFHGLSKESIEVFEKMLSHAVR--PDSIAFLEVLSACS 476
++++W ++I +A +G S E++++F LS A P+ F VL+A +
Sbjct: 437 EIISWNAMISGFAQNGFSHEALKMF---LSAAAETMPNEYTFGSVLNAIA 483
Score = 164 bits (415), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 100/336 (29%), Positives = 183/336 (54%), Gaps = 15/336 (4%)
Query: 160 LDHITFNSLLRACVQADDIEVGRRLHSFILKVGFGLNCFVSSALVDLYGKCGFVEDARRV 219
+D +T L+AC D++ G ++H F GF VS+A++ +Y K G ++A +
Sbjct: 76 MDEVTLCLALKAC--RGDLKRGCQIHGFSTTSGFTSFVCVSNAVMGMYRKAGRFDNALCI 133
Query: 220 FDEVLCRDLVLWNVMVSCYALNCLGDGAIAVFNLMRLE--GMKGDYFTFSSLVNSCGTLG 277
F+ ++ D+V WN ++S + D IA+ ++R++ G+ D FT+S+ ++ C
Sbjct: 134 FENLVDPDVVSWNTILSGF-----DDNQIALNFVVRMKSAGVVFDAFTYSTALSFCVGSE 188
Query: 278 SSKLGRQIHGLVIKQSFDLDVLVATSLVDMYAKNGNIDDACRVFDGMTAKNVVSWNTMVV 337
LG Q+ V+K + D++V S + MY+++G+ A RVFD M+ K+++SWN+++
Sbjct: 189 GFLLGLQLQSTVVKTGLESDLVVGNSFITMYSRSGSFRGARRVFDEMSFKDMISWNSLLS 248
Query: 338 GFGQNGD-GREAVKLLRDMLQGSFCPDEVTLASILSSCGSLSISCETRQVHAYAIKNGVQ 396
G Q G G EAV + RDM++ D V+ S++++C + RQ+H IK G +
Sbjct: 249 GLSQEGTFGFEAVVIFRDMMREGVELDHVSFTSVITTCCHETDLKLARQIHGLCIKRGYE 308
Query: 397 AFLSIENALINAYSKCGSIAGALQCFGSVKEPDLVTWTSIIGAYAFHGLSKESIEVFEKM 456
+ L + N L++ YSKCG + F + E ++V+WT++I + +++ +F M
Sbjct: 309 SLLEVGNILMSRYSKCGVLEAVKSVFHQMSERNVVSWTTMISSN-----KDDAVSIFLNM 363
Query: 457 LSHAVRPDSIAFLEVLSACSHGGLVSEGLRYFNLMI 492
V P+ + F+ +++A + EGL+ L I
Sbjct: 364 RFDGVYPNEVTFVGLINAVKCNEQIKEGLKIHGLCI 399
>sp|Q9LYU9|PP378_ARATH Pentatricopeptide repeat-containing protein At5g13270,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H90 PE=2
SV=1
Length = 752
Score = 352 bits (902), Expect = 8e-96, Method: Compositional matrix adjust.
Identities = 194/580 (33%), Positives = 313/580 (53%), Gaps = 7/580 (1%)
Query: 79 LQQGKQLHSHIMKLGLCN-KLSLQNQVLHVYVKCKAFDDMEKLFDEMRVRNIVTWNTLIS 137
L G+ LH M++G+ N + LQN VL +Y +C++ +D +KLFDEM N V+ T+IS
Sbjct: 99 LSHGRLLHDR-MRMGIENPSVLLQNCVLQMYCECRSLEDADKLFDEMSELNAVSRTTMIS 157
Query: 138 GIINCG--GNVTPYFRRMLLDNVRLDHITFNSLLRACVQADDIEVGRRLHSFILKVGFGL 195
G F ML + + +LL++ V ++ GR++H+ +++ G
Sbjct: 158 AYAEQGILDKAVGLFSGMLASGDKPPSSMYTTLLKSLVNPRALDFGRQIHAHVIRAGLCS 217
Query: 196 NCFVSSALVDLYGKCGFVEDARRVFDEVLCRDLVLWNVMVSCYALNCLGDGAIAVFNLMR 255
N + + +V++Y KCG++ A+RVFD++ + V ++ Y A+ +F +
Sbjct: 218 NTSIETGIVNMYVKCGWLVGAKRVFDQMAVKKPVACTGLMVGYTQAGRARDALKLFVDLV 277
Query: 256 LEGMKGDYFTFSSLVNSCGTLGSSKLGRQIHGLVIKQSFDLDVLVATSLVDMYAKNGNID 315
EG++ D F FS ++ +C +L LG+QIH V K + +V V T LVD Y K + +
Sbjct: 278 TEGVEWDSFVFSVVLKACASLEELNLGKQIHACVAKLGLESEVSVGTPLVDFYIKCSSFE 337
Query: 316 DACRVFDGMTAKNVVSWNTMVVGFGQNGDGREAVKLLRDML-QGSFCPDEVTLASILSSC 374
ACR F + N VSW+ ++ G+ Q EAVK + + + + + T SI +C
Sbjct: 338 SACRAFQEIREPNDVSWSAIISGYCQMSQFEEAVKTFKSLRSKNASILNSFTYTSIFQAC 397
Query: 375 GSLSISCETRQVHAYAIKNGVQAFLSIENALINAYSKCGSIAGALQCFGSVKEPDLVTWT 434
L+ QVHA AIK + E+ALI YSKCG + A + F S+ PD+V WT
Sbjct: 398 SVLADCNIGGQVHADAIKRSLIGSQYGESALITMYSKCGCLDDANEVFESMDNPDIVAWT 457
Query: 435 SIIGAYAFHGLSKESIEVFEKMLSHAVRPDSIAFLEVLSACSHGGLVSEGLRYFNLMISD 494
+ I +A++G + E++ +FEKM+S ++P+S+ F+ VL+ACSH GLV +G + M+
Sbjct: 458 AFISGHAYYGNASEALRLFEKMVSCGMKPNSVTFIAVLTACSHAGLVEQGKHCLDTMLRK 517
Query: 495 YHILPDSEHYTCLTDLLGRVGLLVEAYDLLASMPIEPRSDTLGAFIGACKVHGSIGLAKW 554
Y++ P +HY C+ D+ R GLL EA + +MP EP + + F+ C H ++ L +
Sbjct: 518 YNVAPTIDHYDCMIDIYARSGLLDEALKFMKNMPFEPDAMSWKCFLSGCWTHKNLELGEI 577
Query: 555 AAEKLLELEPSKPVNYALVSNVYASERCWFDVARLRKMMRDNCDHKVPGCSWIEIAGEIH 614
A E+L +L+P Y L N+Y W + A + K+M + K CSWI+ G+IH
Sbjct: 578 AGEELRQLDPEDTAGYVLPFNLYTWAGKWEEAAEMMKLMNERMLKKELSCSWIQEKGKIH 637
Query: 615 TFVSSDRSHPQAVHMYAMLCTVFGLMEENNVSGHCNVLDK 654
F+ D+ HPQ +Y L G ME + CN+ ++
Sbjct: 638 RFIVGDKHHPQTQEIYEKLKEFDGFMEGDMF--QCNMTER 675
Score = 177 bits (448), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 103/391 (26%), Positives = 194/391 (49%), Gaps = 13/391 (3%)
Query: 52 SGTIHESTHSAHSFYSQALKVSAKFGFLQQGKQLHSHIMKLGLCNKLSLQNQVLHVYVKC 111
SG + S Y+ LK L G+Q+H+H+++ GLC+ S++ ++++YVKC
Sbjct: 173 SGMLASGDKPPSSMYTTLLKSLVNPRALDFGRQIHAHVIRAGLCSNTSIETGIVNMYVKC 232
Query: 112 KAFDDMEKLFDEMRVRNIVTWNTLISGIINCG--GNVTPYFRRMLLDNVRLDHITFNSLL 169
+++FD+M V+ V L+ G G + F ++ + V D F+ +L
Sbjct: 233 GWLVGAKRVFDQMAVKKPVACTGLMVGYTQAGRARDALKLFVDLVTEGVEWDSFVFSVVL 292
Query: 170 RACVQADDIEVGRRLHSFILKVGFGLNCFVSSALVDLYGKCGFVEDARRVFDEVLCRDLV 229
+AC +++ +G+++H+ + K+G V + LVD Y KC E A R F E+ + V
Sbjct: 293 KACASLEELNLGKQIHACVAKLGLESEVSVGTPLVDFYIKCSSFESACRAFQEIREPNDV 352
Query: 230 LWNVMVSCYALNCLGDGAIAVFNLMRLEGMKG-DYFTFSSLVNSCGTLGSSKLGRQIHGL 288
W+ ++S Y + A+ F +R + + FT++S+ +C L +G Q+H
Sbjct: 353 SWSAIISGYCQMSQFEEAVKTFKSLRSKNASILNSFTYTSIFQACSVLADCNIGGQVHAD 412
Query: 289 VIKQSFDLDVLVATSLVDMYAKNGNIDDACRVFDGMTAKNVVSWNTMVVGFGQNGDGREA 348
IK+S ++L+ MY+K G +DDA VF+ M ++V+W + G G+ EA
Sbjct: 413 AIKRSLIGSQYGESALITMYSKCGCLDDANEVFESMDNPDIVAWTAFISGHAYYGNASEA 472
Query: 349 VKLLRDMLQGSFCPDEVTLASILSSCGSLSI-----SCETRQVHAYAIKNGVQAFLSIEN 403
++L M+ P+ VT ++L++C + C + Y + + + +
Sbjct: 473 LRLFEKMVSCGMKPNSVTFIAVLTACSHAGLVEQGKHCLDTMLRKYNVAPTIDHY----D 528
Query: 404 ALINAYSKCGSIAGALQCFGSVK-EPDLVTW 433
+I+ Y++ G + AL+ ++ EPD ++W
Sbjct: 529 CMIDIYARSGLLDEALKFMKNMPFEPDAMSW 559
Score = 120 bits (300), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 76/278 (27%), Positives = 141/278 (50%), Gaps = 5/278 (1%)
Query: 66 YSQALKVSAKFGFLQQGKQLHSHIMKLGLCNKLSLQNQVLHVYVKCKAFDDMEKLFDEMR 125
+S LK A L GKQ+H+ + KLGL +++S+ ++ Y+KC +F+ + F E+R
Sbjct: 288 FSVVLKACASLEELNLGKQIHACVAKLGLESEVSVGTPLVDFYIKCSSFESACRAFQEIR 347
Query: 126 VRNIVTWNTLISGIINCGG--NVTPYFRRMLLDNVR-LDHITFNSLLRACVQADDIEVGR 182
N V+W+ +ISG F+ + N L+ T+ S+ +AC D +G
Sbjct: 348 EPNDVSWSAIISGYCQMSQFEEAVKTFKSLRSKNASILNSFTYTSIFQACSVLADCNIGG 407
Query: 183 RLHSFILKVGFGLNCFVSSALVDLYGKCGFVEDARRVFDEVLCRDLVLWNVMVSCYALNC 242
++H+ +K + + SAL+ +Y KCG ++DA VF+ + D+V W +S +A
Sbjct: 408 QVHADAIKRSLIGSQYGESALITMYSKCGCLDDANEVFESMDNPDIVAWTAFISGHAYYG 467
Query: 243 LGDGAIAVFNLMRLEGMKGDYFTFSSLVNSCGTLGSSKLGRQ-IHGLVIKQSFDLDVLVA 301
A+ +F M GMK + TF +++ +C G + G+ + ++ K + +
Sbjct: 468 NASEALRLFEKMVSCGMKPNSVTFIAVLTACSHAGLVEQGKHCLDTMLRKYNVAPTIDHY 527
Query: 302 TSLVDMYAKNGNIDDACRVFDGMT-AKNVVSWNTMVVG 338
++D+YA++G +D+A + M + +SW + G
Sbjct: 528 DCMIDIYARSGLLDEALKFMKNMPFEPDAMSWKCFLSG 565
>sp|O82380|PP175_ARATH Pentatricopeptide repeat-containing protein At2g29760,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H33 PE=2
SV=1
Length = 738
Score = 350 bits (899), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 202/630 (32%), Positives = 333/630 (52%), Gaps = 48/630 (7%)
Query: 79 LQQGKQLHSHIMKLGLCNKLSLQNQVLHVYVKCKAFDDME---KLFDEMRVRNIVTWNTL 135
L+Q KQ H H+++ G + ++ L +F +E K+FDE+ N WNTL
Sbjct: 43 LRQLKQTHGHMIRTGTFSDPYSASK-LFAMAALSSFASLEYARKVFDEIPKPNSFAWNTL 101
Query: 136 ISGIINCGGNVTPYFRRMLLDNVR-----LDHITFNSLLRACVQADDIEVGRRLHSFILK 190
I + V + LD V + TF L++A + + +G+ LH +K
Sbjct: 102 IRAYASGPDPVLSIW--AFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHGMAVK 159
Query: 191 VGFGLNCFVSSALVDLYGKCGFVEDARRVFDEVLCRDLVLWNVMVSCYALNCLGDGAIAV 250
G + FV+++L+ Y CG ++ A +VF + +D+V WN M++ + D A+ +
Sbjct: 160 SAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALEL 219
Query: 251 FNLMRLEGMKGDYFTFSSLVNSCGTLGSSKLGRQIHGLVIKQSFDLDVLVATSLVDMYAK 310
F M E +K + T ++++C + + + GRQ+ + + ++++ +A +++DMY K
Sbjct: 220 FKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTK 279
Query: 311 NGNIDDACRVFDGMTAKNVVSWNTMVVGFG------------------------------ 340
G+I+DA R+FD M K+ V+W TM+ G+
Sbjct: 280 CGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAY 339
Query: 341 -QNGDGREAVKLLRDM-LQGSFCPDEVTLASILSSCGSLSISCETRQVHAYAIKNGVQAF 398
QNG EA+ + ++ LQ + +++TL S LS+C + R +H+Y K+G++
Sbjct: 340 EQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMN 399
Query: 399 LSIENALINAYSKCGSIAGALQCFGSVKEPDLVTWTSIIGAYAFHGLSKESIEVFEKMLS 458
+ +ALI+ YSKCG + + + F SV++ D+ W+++IG A HG E++++F KM
Sbjct: 400 FHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQE 459
Query: 459 HAVRPDSIAFLEVLSACSHGGLVSEGLRYFNLMISDYHILPDSEHYTCLTDLLGRVGLLV 518
V+P+ + F V ACSH GLV E F+ M S+Y I+P+ +HY C+ D+LGR G L
Sbjct: 460 ANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDVLGRSGYLE 519
Query: 519 EAYDLLASMPIEPRSDTLGAFIGACKVHGSIGLAKWAAEKLLELEPSKPVNYALVSNVYA 578
+A + +MPI P + GA +GACK+H ++ LA+ A +LLELEP + L+SN+YA
Sbjct: 520 KAVKFIEAMPIPPSTSVWGALLGACKIHANLNLAEMACTRLLELEPRNDGAHVLLSNIYA 579
Query: 579 SERCWFDVARLRKMMRDNCDHKVPGCSWIEIAGEIHTFVSSDRSHPQAVHMYAMLCTVFG 638
W +V+ LRK MR K PGCS IEI G IH F+S D +HP + +Y L V
Sbjct: 580 KLGKWENVSELRKHMRVTGLKKEPGCSSIEIDGMIHEFLSGDNAHPMSEKVYGKLHEVME 639
Query: 639 LMEENNVSGHCN-----VLDKEMDECTLWL 663
++ N + + ++EM E +L L
Sbjct: 640 KLKSNGYEPEISQVLQIIEEEEMKEQSLNL 669
Score = 181 bits (458), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 104/411 (25%), Positives = 207/411 (50%), Gaps = 36/411 (8%)
Query: 70 LKVSAKFGFLQQGKQLHSHIMKLGLCNKLSLQNQVLHVYVKCKAFDDMEKLFDEMRVRNI 129
+K +A+ L G+ LH +K + + + + N ++H Y C D K+F ++ +++
Sbjct: 138 IKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDV 197
Query: 130 VTWNTLISGIINCGG--NVTPYFRRMLLDNVRLDHITFNSLLRACVQADDIEVGRRLHSF 187
V+WN++I+G + G F++M ++V+ H+T +L AC + ++E GR++ S+
Sbjct: 198 VSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSY 257
Query: 188 ILKVGFGLNCFVSSALVDLYGKCGFVEDARRVFD-------------------------- 221
I + +N +++A++D+Y KCG +EDA+R+FD
Sbjct: 258 IEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAA 317
Query: 222 -EVLC----RDLVLWNVMVSCYALNCLGDGAIAVFNLMRLE-GMKGDYFTFSSLVNSCGT 275
EVL +D+V WN ++S Y N + A+ VF+ ++L+ MK + T S +++C
Sbjct: 318 REVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQ 377
Query: 276 LGSSKLGRQIHGLVIKQSFDLDVLVATSLVDMYAKNGNIDDACRVFDGMTAKNVVSWNTM 335
+G+ +LGR IH + K ++ V ++L+ MY+K G+++ + VF+ + ++V W+ M
Sbjct: 378 VGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAM 437
Query: 336 VVGFGQNGDGREAVKLLRDMLQGSFCPDEVTLASILSSCGSLSISCETRQV-HAYAIKNG 394
+ G +G G EAV + M + + P+ VT ++ +C + E + H G
Sbjct: 438 IGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYG 497
Query: 395 VQAFLSIENALINAYSKCGSIAGALQCFGSVK-EPDLVTWTSIIGAYAFHG 444
+ +++ + G + A++ ++ P W +++GA H
Sbjct: 498 IVPEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHA 548
Score = 166 bits (420), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 103/339 (30%), Positives = 177/339 (52%), Gaps = 17/339 (5%)
Query: 156 DNVRLDHITFNSLLRACVQADDIEVGRRLHSFILKVGFGLNCFVSSALVDLYGKCGF--V 213
+N R HI SL+ CV + ++ H +++ G + + +S L + F +
Sbjct: 27 NNERSRHI---SLIERCVSLRQL---KQTHGHMIRTGTFSDPYSASKLFAMAALSSFASL 80
Query: 214 EDARRVFDEVLCRDLVLWNVMVSCYALNCLGDGAIAVFNLMRLEGMKGDY---FTFSSLV 270
E AR+VFDE+ + WN ++ YA D ++++ + + Y +TF L+
Sbjct: 81 EYARKVFDEIPKPNSFAWNTLIRAYASG--PDPVLSIWAFLDMVSESQCYPNKYTFPFLI 138
Query: 271 NSCGTLGSSKLGRQIHGLVIKQSFDLDVLVATSLVDMYAKNGNIDDACRVFDGMTAKNVV 330
+ + S LG+ +HG+ +K + DV VA SL+ Y G++D AC+VF + K+VV
Sbjct: 139 KAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVV 198
Query: 331 SWNTMVVGFGQNGDGREAVKLLRDMLQGSFCPDEVTLASILSSCGSLSISCETRQVHAYA 390
SWN+M+ GF Q G +A++L + M VT+ +LS+C + RQV +Y
Sbjct: 199 SWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYI 258
Query: 391 IKNGVQAFLSIENALINAYSKCGSIAGALQCFGSVKEPDLVTWTSIIGAYAFHGLSKESI 450
+N V L++ NA+++ Y+KCGSI A + F +++E D VTWT+++ YA E
Sbjct: 259 EENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAI----SEDY 314
Query: 451 EVFEKMLSHAVRPDSIAFLEVLSACSHGGLVSEGLRYFN 489
E ++L+ + D +A+ ++SA G +E L F+
Sbjct: 315 EAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFH 353
Score = 124 bits (312), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 84/309 (27%), Positives = 151/309 (48%), Gaps = 47/309 (15%)
Query: 57 ESTHSAHSFYSQALKVSAKFGFLQQGKQLHSHIMKLGLCNKLSLQNQVLHVYVKCKAFDD 116
E ++H L AK L+ G+Q+ S+I + + L+L N +L +Y KC + +D
Sbjct: 226 EDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIED 285
Query: 117 MEKLFDEMRVRNIVTWNTLISG---------------------IINCGGNVTPYFRR--- 152
++LFD M ++ VTW T++ G I+ ++ Y +
Sbjct: 286 AKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKP 345
Query: 153 ----------MLLDNVRLDHITFNSLLRACVQADDIEVGRRLHSFILKVGFGLNCFVSSA 202
L N++L+ IT S L AC Q +E+GR +HS+I K G +N V+SA
Sbjct: 346 NEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFHVTSA 405
Query: 203 LVDLYGKCGFVEDARRVFDEVLCRDLVLWNVMVSCYALNCLGDGAIAVFNLMRLEGMKGD 262
L+ +Y KCG +E +R VF+ V RD+ +W+ M+ A++ G+ A+ +F M+ +K +
Sbjct: 406 LIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPN 465
Query: 263 YFTFSSLVNSCGTLG----SSKLGRQI---HGLVIKQSFDLDVLVATSLVDMYAKNGNID 315
TF+++ +C G + L Q+ +G+V ++ +VD+ ++G ++
Sbjct: 466 GVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKH------YACIVDVLGRSGYLE 519
Query: 316 DACRVFDGM 324
A + + M
Sbjct: 520 KAVKFIEAM 528
>sp|Q9LIQ7|PP252_ARATH Pentatricopeptide repeat-containing protein At3g24000,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H87 PE=2
SV=1
Length = 633
Score = 349 bits (895), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 175/465 (37%), Positives = 273/465 (58%), Gaps = 1/465 (0%)
Query: 161 DHITFNSLLRACVQADDIEVGRRLHSFILKVGFGLNCFVSSALVDLYGKCGFVEDARRVF 220
D +N+LL+ C + GR +H+ IL+ F + + + L+++Y KCG +E+AR+VF
Sbjct: 59 DRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVF 118
Query: 221 DEVLCRDLVLWNVMVSCYALNCLGDGAIAVFNLMRLEGMKGDYFTFSSLVNSCGTLGSSK 280
+++ RD V W ++S Y+ + A+ FN M G + FT SS++ +
Sbjct: 119 EKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGC 178
Query: 281 LGRQIHGLVIKQSFDLDVLVATSLVDMYAKNGNIDDACRVFDGMTAKNVVSWNTMVVGFG 340
G Q+HG +K FD +V V ++L+D+Y + G +DDA VFD + ++N VSWN ++ G
Sbjct: 179 CGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHA 238
Query: 341 QNGDGREAVKLLRDMLQGSFCPDEVTLASILSSCGSLSISCETRQVHAYAIKNGVQAFLS 400
+ +A++L + ML+ F P + AS+ +C S + + VHAY IK+G +
Sbjct: 239 RRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAF 298
Query: 401 IENALINAYSKCGSIAGALQCFGSVKEPDLVTWTSIIGAYAFHGLSKESIEVFEKMLSHA 460
N L++ Y+K GSI A + F + + D+V+W S++ AYA HG KE++ FE+M
Sbjct: 299 AGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVG 358
Query: 461 VRPDSIAFLEVLSACSHGGLVSEGLRYFNLMISDYHILPDSEHYTCLTDLLGRVGLLVEA 520
+RP+ I+FL VL+ACSH GL+ EG Y+ LM D I+P++ HY + DLLGR G L A
Sbjct: 359 IRPNEISFLSVLTACSHSGLLDEGWHYYELMKKD-GIVPEAWHYVTVVDLLGRAGDLNRA 417
Query: 521 YDLLASMPIEPRSDTLGAFIGACKVHGSIGLAKWAAEKLLELEPSKPVNYALVSNVYASE 580
+ MPIEP + A + AC++H + L +AAE + EL+P P + ++ N+YAS
Sbjct: 418 LRFIEEMPIEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDPGPHVILYNIYASG 477
Query: 581 RCWFDVARLRKMMRDNCDHKVPGCSWIEIAGEIHTFVSSDRSHPQ 625
W D AR+RK M+++ K P CSW+EI IH FV++D HPQ
Sbjct: 478 GRWNDAARVRKKMKESGVKKEPACSWVEIENAIHMFVANDERHPQ 522
Score = 210 bits (534), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 114/382 (29%), Positives = 206/382 (53%), Gaps = 3/382 (0%)
Query: 65 FYSQALKVSAKFGFLQQGKQLHSHIMKLGLCNKLSLQNQVLHVYVKCKAFDDMEKLFDEM 124
FY+ LK F L QG+ +H+HI++ + + + N +L++Y KC + ++ K+F++M
Sbjct: 62 FYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKM 121
Query: 125 RVRNIVTWNTLISGIINCGG--NVTPYFRRMLLDNVRLDHITFNSLLRACVQADDIEVGR 182
R+ VTW TLISG + +F +ML + T +S+++A G
Sbjct: 122 PQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGH 181
Query: 183 RLHSFILKVGFGLNCFVSSALVDLYGKCGFVEDARRVFDEVLCRDLVLWNVMVSCYALNC 242
+LH F +K GF N V SAL+DLY + G ++DA+ VFD + R+ V WN +++ +A
Sbjct: 182 QLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRS 241
Query: 243 LGDGAIAVFNLMRLEGMKGDYFTFSSLVNSCGTLGSSKLGRQIHGLVIKQSFDLDVLVAT 302
+ A+ +F M +G + +F+++SL +C + G + G+ +H +IK L
Sbjct: 242 GTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGN 301
Query: 303 SLVDMYAKNGNIDDACRVFDGMTAKNVVSWNTMVVGFGQNGDGREAVKLLRDMLQGSFCP 362
+L+DMYAK+G+I DA ++FD + ++VVSWN+++ + Q+G G+EAV +M + P
Sbjct: 302 TLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRP 361
Query: 363 DEVTLASILSSCGSLSISCETRQVHAYAIKNGVQAFLSIENALINAYSKCGSIAGALQCF 422
+E++ S+L++C + E + K+G+ +++ + G + AL+
Sbjct: 362 NEISFLSVLTACSHSGLLDEGWHYYELMKKDGIVPEAWHYVTVVDLLGRAGDLNRALRFI 421
Query: 423 GSVK-EPDLVTWTSIIGAYAFH 443
+ EP W +++ A H
Sbjct: 422 EEMPIEPTAAIWKALLNACRMH 443
Score = 138 bits (348), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 103/397 (25%), Positives = 185/397 (46%), Gaps = 38/397 (9%)
Query: 31 TTTITNAQKHDRS-----VLSSQLRNSGTIHESTHSAHSFYSQALKVSAKFGFLQQGKQL 85
TT I+ +HDR + LR + +E T S +K +A G QL
Sbjct: 130 TTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFT------LSSVIKAAAAERRGCCGHQL 183
Query: 86 HSHIMKLGLCNKLSLQNQVLHVYVKCKAFDDMEKLFDEMRVRNIVTWNTLISGIINCGG- 144
H +K G + + + + +L +Y + DD + +FD + RN V+WN LI+G G
Sbjct: 184 HGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGT 243
Query: 145 -NVTPYFRRMLLDNVRLDHITFNSLLRACVQADDIEVGRRLHSFILKVGFGLNCFVSSAL 203
F+ ML D R H ++ SL AC +E G+ +H++++K G L F + L
Sbjct: 244 EKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTL 303
Query: 204 VDLYGKCGFVEDARRVFDEVLCRDLVLWNVMVSCYALNCLGDGAIAVFNLMRLEGMKGDY 263
+D+Y K G + DAR++FD + RD+V WN +++ YA + G A+ F MR G++ +
Sbjct: 304 LDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNE 363
Query: 264 FTFSSLVNSCGTLGSSKLGRQIHGLVIKQSFDLDVLVATSLVDMYAKNGNIDDACRVFDG 323
+F S++ +C G G + L+ K + ++VD+ + G+++ A R +
Sbjct: 364 ISFLSVLTACSHSGLLDEGWHYYELMKKDGIVPEAWHYVTVVDLLGRAGDLNRALRFIEE 423
Query: 324 MTAKNVVS-WNTMVVGFGQNGDGREAVKLLRDMLQGSFC--------PDE----VTLASI 370
M + + W ++ A ++ ++ G++ PD+ V L +I
Sbjct: 424 MPIEPTAAIWKALL----------NACRMHKNTELGAYAAEHVFELDPDDPGPHVILYNI 473
Query: 371 LSSCGSLSISCETRQ--VHAYAIKNGVQAFLSIENAL 405
+S G + + R+ + K +++ IENA+
Sbjct: 474 YASGGRWNDAARVRKKMKESGVKKEPACSWVEIENAI 510
>sp|Q9FXA9|PPR83_ARATH Putative pentatricopeptide repeat-containing protein At1g56570
OS=Arabidopsis thaliana GN=PCMP-E64 PE=3 SV=1
Length = 611
Score = 345 bits (886), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 184/559 (32%), Positives = 314/559 (56%), Gaps = 9/559 (1%)
Query: 100 LQNQVLHVYVKCKAFDDMEKLFDEMRVRNIVTWNTLISGIINCGGNVTPY--FRRMLLDN 157
L ++ Y + ++ LFDEM R++V W +I+G + N + F M+
Sbjct: 47 LATNLIVSYFEKGLVEEARSLFDEMPDRDVVAWTAMITGYASSNYNARAWECFHEMVKQG 106
Query: 158 VRLDHITFNSLLRACVQADDIEVGRRLHSFILKVGFGLNCFVSSALVDLYGKCGF-VEDA 216
+ T +S+L++C + G +H ++K+G + +V +A++++Y C +E A
Sbjct: 107 TSPNEFTLSSVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMYATCSVTMEAA 166
Query: 217 RRVFDEVLCRDLVLWNVMVSCYALNCLGDGAIAVFNLMRLEGMKGDYFTFSSLVNSCGTL 276
+F ++ ++ V W +++ + G G + ++ M LE + + + V + ++
Sbjct: 167 CLIFRDIKVKNDVTWTTLITGFTHLGDGIGGLKMYKQMLLENAEVTPYCITIAVRASASI 226
Query: 277 GSSKLGRQIHGLVIKQSFDLDVLVATSLVDMYAKNGNIDDACRVFDGMTAKNVVSWNTMV 336
S G+QIH VIK+ F ++ V S++D+Y + G + +A F M K++++WNT++
Sbjct: 227 DSVTTGKQIHASVIKRGFQSNLPVMNSILDLYCRCGYLSEAKHYFHEMEDKDLITWNTLI 286
Query: 337 VGFGQNGDGREAVKLLRDMLQGSFCPDEVTLASILSSCGSLSISCETRQVHAYAIKNGVQ 396
+ D EA+ + + F P+ T S++++C +++ +Q+H + G
Sbjct: 287 SEL-ERSDSSEALLMFQRFESQGFVPNCYTFTSLVAACANIAALNCGQQLHGRIFRRGFN 345
Query: 397 AFLSIENALINAYSKCGSIAGALQCFGS-VKEPDLVTWTSIIGAYAFHGLSKESIEVFEK 455
+ + NALI+ Y+KCG+I + + FG V +LV+WTS++ Y HG E++E+F+K
Sbjct: 346 KNVELANALIDMYAKCGNIPDSQRVFGEIVDRRNLVSWTSMMIGYGSHGYGAEAVELFDK 405
Query: 456 MLSHAVRPDSIAFLEVLSACSHGGLVSEGLRYFNLMISDYHILPDSEHYTCLTDLLGRVG 515
M+S +RPD I F+ VLSAC H GLV +GL+YFN+M S+Y I PD + Y C+ DLLGR G
Sbjct: 406 MVSSGIRPDRIVFMAVLSACRHAGLVEKGLKYFNVMESEYGINPDRDIYNCVVDLLGRAG 465
Query: 516 LLVEAYDLLASMPIEPRSDTLGAFIGACKVHGSIGL-AKWAAEKLLELEPSKPVNYALVS 574
+ EAY+L+ MP +P T GA +GACK H GL ++ AA K++EL+P Y ++S
Sbjct: 466 KIGEAYELVERMPFKPDESTWGAILGACKAHKHNGLISRLAARKVMELKPKMVGTYVMLS 525
Query: 575 NVYASERCWFDVARLRKMMRDNCDHKVPGCSWIEIAGEIHTFVSSDRSHPQAVHMYAMLC 634
+YA+E W D AR+RKMMR + K G SWI + ++ +F SD+ P A +Y++L
Sbjct: 526 YIYAAEGKWVDFARVRKMMRMMGNKKEAGMSWILVENQVFSFAVSDKMCPNASSVYSVLG 585
Query: 635 TVFGLMEENNVSGHCNVLD 653
L+EE +G+ LD
Sbjct: 586 L---LIEETREAGYVPELD 601
Score = 128 bits (322), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 75/262 (28%), Positives = 137/262 (52%), Gaps = 3/262 (1%)
Query: 69 ALKVSAKFGFLQQGKQLHSHIMKLGLCNKLSLQNQVLHVYVKCKAFDDMEKLFDEMRVRN 128
A++ SA + GKQ+H+ ++K G + L + N +L +Y +C + + F EM ++
Sbjct: 219 AVRASASIDSVTTGKQIHASVIKRGFQSNLPVMNSILDLYCRCGYLSEAKHYFHEMEDKD 278
Query: 129 IVTWNTLISGIINC-GGNVTPYFRRMLLDNVRLDHITFNSLLRACVQADDIEVGRRLHSF 187
++TWNTLIS + F+R + TF SL+ AC + G++LH
Sbjct: 279 LITWNTLISELERSDSSEALLMFQRFESQGFVPNCYTFTSLVAACANIAALNCGQQLHGR 338
Query: 188 ILKVGFGLNCFVSSALVDLYGKCGFVEDARRVFDEVL-CRDLVLWNVMVSCYALNCLGDG 246
I + GF N +++AL+D+Y KCG + D++RVF E++ R+LV W M+ Y + G
Sbjct: 339 IFRRGFNKNVELANALIDMYAKCGNIPDSQRVFGEIVDRRNLVSWTSMMIGYGSHGYGAE 398
Query: 247 AIAVFNLMRLEGMKGDYFTFSSLVNSCGTLGSSKLGRQIHGLVIKQ-SFDLDVLVATSLV 305
A+ +F+ M G++ D F +++++C G + G + ++ + + D + +V
Sbjct: 399 AVELFDKMVSSGIRPDRIVFMAVLSACRHAGLVEKGLKYFNVMESEYGINPDRDIYNCVV 458
Query: 306 DMYAKNGNIDDACRVFDGMTAK 327
D+ + G I +A + + M K
Sbjct: 459 DLLGRAGKIGEAYELVERMPFK 480
Score = 90.5 bits (223), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 91/160 (56%), Gaps = 1/160 (0%)
Query: 299 LVATSLVDMYAKNGNIDDACRVFDGMTAKNVVSWNTMVVGFGQNGDGREAVKLLRDMLQG 358
++AT+L+ Y + G +++A +FD M ++VV+W M+ G+ + A + +M++
Sbjct: 46 ILATNLIVSYFEKGLVEEARSLFDEMPDRDVVAWTAMITGYASSNYNARAWECFHEMVKQ 105
Query: 359 SFCPDEVTLASILSSCGSLSISCETRQVHAYAIKNGVQAFLSIENALINAYSKCG-SIAG 417
P+E TL+S+L SC ++ + VH +K G++ L ++NA++N Y+ C ++
Sbjct: 106 GTSPNEFTLSSVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMYATCSVTMEA 165
Query: 418 ALQCFGSVKEPDLVTWTSIIGAYAFHGLSKESIEVFEKML 457
A F +K + VTWT++I + G ++++++ML
Sbjct: 166 ACLIFRDIKVKNDVTWTTLITGFTHLGDGIGGLKMYKQML 205
Score = 69.7 bits (169), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 83/163 (50%), Gaps = 6/163 (3%)
Query: 66 YSQALKVSAKFGFLQQGKQLHSHIMKLGLCNKLSLQNQVLHVYVKCKAFDDMEKLFDEM- 124
++ + A L G+QLH I + G + L N ++ +Y KC D +++F E+
Sbjct: 316 FTSLVAACANIAALNCGQQLHGRIFRRGFNKNVELANALIDMYAKCGNIPDSQRVFGEIV 375
Query: 125 RVRNIVTWNTLISGIIN--CGGNVTPYFRRMLLDNVRLDHITFNSLLRACVQADDIEVGR 182
RN+V+W +++ G + G F +M+ +R D I F ++L AC A +E G
Sbjct: 376 DRRNLVSWTSMMIGYGSHGYGAEAVELFDKMVSSGIRPDRIVFMAVLSACRHAGLVEKGL 435
Query: 183 RLHSFILKVGFGLNC--FVSSALVDLYGKCGFVEDARRVFDEV 223
+ + +++ +G+N + + +VDL G+ G + +A + + +
Sbjct: 436 KYFN-VMESEYGINPDRDIYNCVVDLLGRAGKIGEAYELVERM 477
>sp|O64705|PP184_ARATH Pentatricopeptide repeat-containing protein At2g34400
OS=Arabidopsis thaliana GN=PCMP-E23 PE=3 SV=2
Length = 621
Score = 345 bits (884), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 179/503 (35%), Positives = 284/503 (56%), Gaps = 7/503 (1%)
Query: 120 LFDEMRVRNIVTWNTLISGIINCGGN---VTPYFRRMLLDNVRLDHITFNSLLRACVQAD 176
LF N ++N +I G+ N + +RRM ++ D T+N + AC + +
Sbjct: 87 LFSVTEEPNHYSFNYMIRGLTNTWNDHEAALSLYRRMKFSGLKPDKFTYNFVFIACAKLE 146
Query: 177 DIEVGRRLHSFILKVGFGLNCFVSSALVDLYGKCGFVEDARRVFDEVLCRDLVLWNVMVS 236
+I VGR +HS + KVG + ++ +L+ +Y KCG V AR++FDE+ RD V WN M+S
Sbjct: 147 EIGVGRSVHSSLFKVGLERDVHINHSLIMMYAKCGQVGYARKLFDEITERDTVSWNSMIS 206
Query: 237 CYALNCLGDGAIAVFNLMRLEGMKGDYFTFSSLVNSCGTLGSSKLGRQIHGLVIKQSFDL 296
Y+ A+ +F M EG + D T S++ +C LG + GR + + I + L
Sbjct: 207 GYSEAGYAKDAMDLFRKMEEEGFEPDERTLVSMLGACSHLGDLRTGRLLEEMAITKKIGL 266
Query: 297 DVLVATSLVDMYAKNGNIDDACRVFDGMTAKNVVSWNTMVVGFGQNGDGREAVKLLRDML 356
+ + L+ MY K G++D A RVF+ M K+ V+W M+ + QNG EA KL +M
Sbjct: 267 STFLGSKLISMYGKCGDLDSARRVFNQMIKKDRVAWTAMITVYSQNGKSSEAFKLFFEME 326
Query: 357 QGSFCPDEVTLASILSSCGSLSISCETRQVHAYAIKNGVQAFLSIENALINAYSKCGSIA 416
+ PD TL+++LS+CGS+ +Q+ +A + +Q + + L++ Y KCG +
Sbjct: 327 KTGVSPDAGTLSTVLSACGSVGALELGKQIETHASELSLQHNIYVATGLVDMYGKCGRVE 386
Query: 417 GALQCFGSVKEPDLVTWTSIIGAYAFHGLSKESIEVFEKMLSHAVRPDSIAFLEVLSACS 476
AL+ F ++ + TW ++I AYA G +KE++ +F++M +V P I F+ VLSAC
Sbjct: 387 EALRVFEAMPVKNEATWNAMITAYAHQGHAKEALLLFDRM---SVPPSDITFIGVLSACV 443
Query: 477 HGGLVSEGLRYFNLMISDYHILPDSEHYTCLTDLLGRVGLLVEAYDLLASMPIEPRSDTL 536
H GLV +G RYF+ M S + ++P EHYT + DLL R G+L EA++ + P +P L
Sbjct: 444 HAGLVHQGCRYFHEMSSMFGLVPKIEHYTNIIDLLSRAGMLDEAWEFMERFPGKPDEIML 503
Query: 537 GAFIGACKVHGSIGLAKWAAEKLLELEPSKPV-NYALVSNVYASERCWFDVARLRKMMRD 595
A +GAC + + + A L+E++ +K NY + SNV A + W + A++R +MRD
Sbjct: 504 AAILGACHKRKDVAIREKAMRMLMEMKEAKNAGNYVISSNVLADMKMWDESAKMRALMRD 563
Query: 596 NCDHKVPGCSWIEIAGEIHTFVS 618
K PGCSWIEI GE+ F++
Sbjct: 564 RGVVKTPGCSWIEIEGELMEFLA 586
Score = 213 bits (542), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 126/404 (31%), Positives = 203/404 (50%), Gaps = 38/404 (9%)
Query: 74 AKFGFLQQGKQLHSHIMKLGLCNKLSLQNQVLHVYVKCKAFDDMEKLFDEMRVRNIVTWN 133
AK + G+ +HS + K+GL + + + ++ +Y KC KLFDE+ R+ V+WN
Sbjct: 143 AKLEEIGVGRSVHSSLFKVGLERDVHINHSLIMMYAKCGQVGYARKLFDEITERDTVSWN 202
Query: 134 TLISGIINCG--GNVTPYFRRMLLDNVRLDHITFNSLLRACVQADDIEVGRRLHSFILKV 191
++ISG G + FR+M + D T S+L AC D+ GR L +
Sbjct: 203 SMISGYSEAGYAKDAMDLFRKMEEEGFEPDERTLVSMLGACSHLGDLRTGRLLEEMAITK 262
Query: 192 GFGLNCFVSSALVDLYGKCGFVEDARRVFDEVLCRDLVLWNVMVSCYALNCLGDGAIAVF 251
GL+ F+ S L+ +YGKCG ++ ARRVF++++ +D V W M++ Y+ N A +F
Sbjct: 263 KIGLSTFLGSKLISMYGKCGDLDSARRVFNQMIKKDRVAWTAMITVYSQNGKSSEAFKLF 322
Query: 252 NLMRLEGMKGDYFTFSSLVNSCGTLGSSKLGRQIHGLVIKQSFDLDVLVATSLVDMYAKN 311
M G+ D T S+++++CG++G+ +LG+QI + S ++ VAT LVDMY K
Sbjct: 323 FEMEKTGVSPDAGTLSTVLSACGSVGALELGKQIETHASELSLQHNIYVATGLVDMYGKC 382
Query: 312 GNIDDACRVFDGMTAKNVVSWNTMVVGFGQNGDGREAVKLLRDMLQGSFCPDEVTLASIL 371
G +++A RVF+ M KN +WN M+ + G +EA+ L M S P ++T +L
Sbjct: 383 GRVEEALRVFEAMPVKNEATWNAMITAYAHQGHAKEALLLFDRM---SVPPSDITFIGVL 439
Query: 372 SSCGSLSISCETRQVHAYAIKNGVQAFLSIENALINAYSKCGSIAGALQCFGSVKEPDLV 431
S+C VHA + G + F + + FG V P +
Sbjct: 440 SAC-----------VHAGLVHQGCRYFHEMSS-----------------MFGLV--PKIE 469
Query: 432 TWTSIIGAYAFHGLSKESIEVFEKMLSHAVRPDSIAFLEVLSAC 475
+T+II + G+ E+ E E+ +PD I +L AC
Sbjct: 470 HYTNIIDLLSRAGMLDEAWEFMERFPG---KPDEIMLAAILGAC 510
>sp|P0C899|PP271_ARATH Putative pentatricopeptide repeat-containing protein At3g49142
OS=Arabidopsis thaliana GN=PCMP-H77 PE=3 SV=1
Length = 686
Score = 343 bits (881), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 200/562 (35%), Positives = 291/562 (51%), Gaps = 35/562 (6%)
Query: 83 KQLHSHIMKLGLCNKLSLQNQVLHVYVKCKAFDDMEKLFDEMRVRNIVTWNTLISGIINC 142
+ +HS I+ L SL +++ Y K K+FDE+ RN++ N +I +N
Sbjct: 59 RTVHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNN 118
Query: 143 G--GNVTPYFRRMLLDNVRLDHITFNSLLRACVQADDIEVGRRLHSFILKVGFGLNCFVS 200
G G F M NVR DH TF +L+AC + I +GR++H KVG FV
Sbjct: 119 GFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVG 178
Query: 201 SALVDLYGKCGFVEDARRVFDEVLCRDLVLWNVMVSCYALNCLGDGAIAVFNLMRLEGMK 260
+ LV +YGKCGF+ +AR V DE+ RD+V WN +V YA N D A+ V M +
Sbjct: 179 NGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKIS 238
Query: 261 GDYFTFSSLVNSCGTLGSSKLGRQIHGLVIKQSFDLDVLVATSLVDMYAKNGNIDDACRV 320
D T +SL+ + + + MY K+ +
Sbjct: 239 HDAGTMASLLPAVSNTTTENV-------------------------MYVKD--------M 265
Query: 321 FDGMTAKNVVSWNTMVVGFGQNGDGREAVKLLRDMLQGSFCPDEVTLASILSSCGSLSIS 380
F M K++VSWN M+ + +N EAV+L M F PD V++ S+L +CG S
Sbjct: 266 FFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSAL 325
Query: 381 CETRQVHAYAIKNGVQAFLSIENALINAYSKCGSIAGALQCFGSVKEPDLVTWTSIIGAY 440
+++H Y + + L +ENALI+ Y+KCG + A F ++K D+V+WT++I AY
Sbjct: 326 SLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAY 385
Query: 441 AFHGLSKESIEVFEKMLSHAVRPDSIAFLEVLSACSHGGLVSEGLRYFNLMISDYHILPD 500
F G +++ +F K+ + PDSIAF+ L+ACSH GL+ EG F LM Y I P
Sbjct: 386 GFSGRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPR 445
Query: 501 SEHYTCLTDLLGRVGLLVEAYDLLASMPIEPRSDTLGAFIGACKVHGSIGLAKWAAEKLL 560
EH C+ DLLGR G + EAY + M +EP GA +GAC+VH + AA+KL
Sbjct: 446 LEHLACMVDLLGRAGKVKEAYRFIQDMSMEPNERVWGALLGACRVHSDTDIGLLAADKLF 505
Query: 561 ELEPSKPVNYALVSNVYASERCWFDVARLRKMMRDNCDHKVPGCSWIEIAGEIHTFVSSD 620
+L P + Y L+SN+YA W +V +R +M+ K PG S +E+ IHTF+ D
Sbjct: 506 QLAPEQSGYYVLLSNIYAKAGRWEEVTNIRNIMKSKGLKKNPGASNVEVNRIIHTFLVGD 565
Query: 621 RSHPQAVHMYAMLCTVFGLMEE 642
RSHPQ+ +Y L + M+E
Sbjct: 566 RSHPQSDEIYRELDVLVKKMKE 587
Score = 137 bits (345), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 100/418 (23%), Positives = 192/418 (45%), Gaps = 45/418 (10%)
Query: 63 HSFYSQALKVSAKFGFLQQGKQLHSHIMKLGLCNKLSLQNQVLHVYVKCKAFDDMEKLFD 122
H + LK + G + G+++H K+GL + L + N ++ +Y KC + + D
Sbjct: 140 HYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLD 199
Query: 123 EMRVRNIVTWNTLISGIINCGGNVTPYFRRMLLDNVRLDHITFNSLLRACVQADDIEVGR 182
EM R++V+WN+L+ G N R D D +EV R
Sbjct: 200 EMSRRDVVSWNSLVVGYAQ---------------NQRFD--------------DALEVCR 230
Query: 183 RLHSFILKVGFGLNCFVSSALVDLYGK-CGFVEDARRVFDEVLCRDLVLWNVMVSCYALN 241
+ S + G + A+ + + +V+D +F ++ + LV WNVM+ Y N
Sbjct: 231 EMESVKISHDAGTMASLLPAVSNTTTENVMYVKD---MFFKMGKKSLVSWNVMIGVYMKN 287
Query: 242 CLGDGAIAVFNLMRLEGMKGDYFTFSSLVNSCGTLGSSKLGRQIHGLVIKQSFDLDVLVA 301
+ A+ +++ M +G + D + +S++ +CG + LG++IHG + ++ ++L+
Sbjct: 288 AMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLE 347
Query: 302 TSLVDMYAKNGNIDDACRVFDGMTAKNVVSWNTMVVGFGQNGDGREAVKLLRDMLQGSFC 361
+L+DMYAK G ++ A VF+ M +++VVSW M+ +G +G G +AV L +
Sbjct: 348 NALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQDSGLV 407
Query: 362 PDEVTLASILSSCGSLSI-----SCETRQVHAYAIKNGVQAFLSIENALINAYSKCGSIA 416
PD + + L++C + SC Y I ++ +++ + G +
Sbjct: 408 PDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLA----CMVDLLGRAGKVK 463
Query: 417 GALQCFGSVK-EPDLVTWTSIIGAYAFHGLSKESIEVFEKMLSHAVRPDSIAFLEVLS 473
A + + EP+ W +++GA H + + +K+ A P+ + +LS
Sbjct: 464 EAYRFIQDMSMEPNERVWGALLGACRVHSDTDIGLLAADKLFQLA--PEQSGYYVLLS 519
>sp|Q9SHZ8|PP168_ARATH Pentatricopeptide repeat-containing protein At2g22070
OS=Arabidopsis thaliana GN=PCMP-H41 PE=3 SV=1
Length = 786
Score = 343 bits (880), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 206/652 (31%), Positives = 333/652 (51%), Gaps = 99/652 (15%)
Query: 85 LHSHIMKLGLCNKLSLQNQVLHVYVKCKAFDDMEKLFDEMRVRNIVTWNTLISGIINCGG 144
+H ++K GL + L N +++VY K KLFDEM +R +WNT++S G
Sbjct: 36 VHCRVIKSGLMFSVYLMNNLMNVYSKTGYALHARKLFDEMPLRTAFSWNTVLSAYSKRGD 95
Query: 145 ---------------------------NVTPYFRR------MLLDNVRLDHITFNSLLRA 171
N+ Y + M+ + + T ++L +
Sbjct: 96 MDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIEPTQFTLTNVLAS 155
Query: 172 CVQADDIEVGRRLHSFILKVGFGLNCFVSSALVDLYGKCGFVEDARRVFDEVLCRDLVLW 231
+E G+++HSFI+K+G N VS++L+++Y KCG A+ VFD ++ RD+ W
Sbjct: 156 VAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDISSW 215
Query: 232 NVMVSCYALNCLGDGAIAVF--------------------------------NLMRLEGM 259
N M++ + D A+A F ++R +
Sbjct: 216 NAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLL 275
Query: 260 KGDYFTFSSLVNSCGTLGSSKLGRQIHGLVIKQSFDLDVLVATSLVDMYAKNGNIDDACR 319
D FT +S++++C L +G+QIH ++ FD+ +V +L+ MY++ G ++ A R
Sbjct: 276 SPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARR 335
Query: 320 VFD----------GMTA-----------------------KNVVSWNTMVVGFGQNGDGR 346
+ + G TA ++VV+W M+VG+ Q+G
Sbjct: 336 LIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYG 395
Query: 347 EAVKLLRDMLQGSFCPDEVTLASILSSCGSLSISCETRQVHAYAIKNGVQAFLSIENALI 406
EA+ L R M+ G P+ TLA++LS SL+ +Q+H A+K+G +S+ NALI
Sbjct: 396 EAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSNALI 455
Query: 407 NAYSKCGSIAGALQCFGSVK-EPDLVTWTSIIGAYAFHGLSKESIEVFEKMLSHAVRPDS 465
Y+K G+I A + F ++ E D V+WTS+I A A HG ++E++E+FE ML +RPD
Sbjct: 456 TMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDH 515
Query: 466 IAFLEVLSACSHGGLVSEGLRYFNLMISDYHILPDSEHYTCLTDLLGRVGLLVEAYDLLA 525
I ++ V SAC+H GLV++G +YF++M I+P HY C+ DL GR GLL EA + +
Sbjct: 516 ITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIE 575
Query: 526 SMPIEPRSDTLGAFIGACKVHGSIGLAKWAAEKLLELEPSKPVNYALVSNVYASERCWFD 585
MPIEP T G+ + AC+VH +I L K AAE+LL LEP Y+ ++N+Y++ W +
Sbjct: 576 KMPIEPDVVTWGSLLSACRVHKNIDLGKVAAERLLLLEPENSGAYSALANLYSACGKWEE 635
Query: 586 VARLRKMMRDNCDHKVPGCSWIEIAGEIHTFVSSDRSHPQAVHMYAMLCTVF 637
A++RK M+D K G SWIE+ ++H F D +HP+ +Y + ++
Sbjct: 636 AAKIRKSMKDGRVKKEQGFSWIEVKHKVHVFGVEDGTHPEKNEIYMTMKKIW 687
Score = 96.7 bits (239), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 86/369 (23%), Positives = 158/369 (42%), Gaps = 56/369 (15%)
Query: 82 GKQLHSHIMKLGLCNKLSLQNQVLHVYVKCKAFDDMEKLFDE------------------ 123
GKQ+HSHI+ G + N ++ +Y +C + +L ++
Sbjct: 298 GKQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGY 357
Query: 124 ---------------MRVRNIVTWNTLISGIINCG--GNVTPYFRRMLLDNVRLDHITFN 166
++ R++V W +I G G G FR M+ R + T
Sbjct: 358 IKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLA 417
Query: 167 SLLRACVQADDIEVGRRLHSFILKVGFGLNCFVSSALVDLYGKCGFVEDARRVFDEVLC- 225
++L + G+++H +K G + VS+AL+ +Y K G + A R FD + C
Sbjct: 418 AMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGNITSASRAFDLIRCE 477
Query: 226 RDLVLWNVMVSCYALNCLGDGAIAVFNLMRLEGMKGDYFTFSSLVNSCGTLGSSKLGRQI 285
RD V W M+ A + + A+ +F M +EG++ D+ T+ + ++C G GRQ
Sbjct: 478 RDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQY 537
Query: 286 HGLVIKQSFDLDVLVAT-----SLVDMYAKNGNIDDACRVFDGMTAK-NVVSWNTMVVG- 338
++ D+D ++ T +VD++ + G + +A + M + +VV+W +++
Sbjct: 538 FDMMK----DVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSAC 593
Query: 339 -FGQNGD----GREAVKLLRDMLQGSFCPDEVTLASILSSCGSLSISCETRQVHAYAIKN 393
+N D E + LL G++ LA++ S+CG + + R+
Sbjct: 594 RVHKNIDLGKVAAERLLLLEPENSGAYS----ALANLYSACGKWEEAAKIRKSMKDGRVK 649
Query: 394 GVQAFLSIE 402
Q F IE
Sbjct: 650 KEQGFSWIE 658
Score = 77.4 bits (189), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 98/201 (48%), Gaps = 7/201 (3%)
Query: 81 QGKQLHSHIMKLGLCNKLSLQNQVLHVYVKCKAFDDMEKLFDEMRV-RNIVTWNTLISGI 139
GKQ+H +K G +S+ N ++ +Y K + FD +R R+ V+W ++I +
Sbjct: 431 HGKQIHGSAVKSGEIYSVSVSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIAL 490
Query: 140 INCG--GNVTPYFRRMLLDNVRLDHITFNSLLRACVQADDIEVGRRLHSFILKVGFGLNC 197
G F ML++ +R DHIT+ + AC A + GR+ + V +
Sbjct: 491 AQHGHAEEALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPT 550
Query: 198 FVSSA-LVDLYGKCGFVEDARRVFDEV-LCRDLVLWNVMVS-CYALNCLGDGAIAVFNLM 254
A +VDL+G+ G +++A+ +++ + D+V W ++S C + G +A L+
Sbjct: 551 LSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSACRVHKNIDLGKVAAERLL 610
Query: 255 RLEGMK-GDYFTFSSLVNSCG 274
LE G Y ++L ++CG
Sbjct: 611 LLEPENSGAYSALANLYSACG 631
>sp|Q9M9E2|PPR45_ARATH Pentatricopeptide repeat-containing protein At1g15510,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H73 PE=2
SV=1
Length = 866
Score = 343 bits (879), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 187/567 (32%), Positives = 317/567 (55%), Gaps = 7/567 (1%)
Query: 79 LQQGKQLHSHIMKLGLCNKLSLQNQVLHVYVKCKAFDDMEKLFDEMRVRNIVTWNTLISG 138
L +GK++H H+++ G + + N ++ +YVKC LFD M R+I++WN +ISG
Sbjct: 212 LARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDRMPRRDIISWNAMISG 271
Query: 139 IIN---CGGNVTPYFRRMLLDNVRLDHITFNSLLRACVQADDIEVGRRLHSFILKVGFGL 195
C + +F L +V D +T S++ AC D +GR +H++++ GF +
Sbjct: 272 YFENGMCHEGLELFFAMRGL-SVDPDLMTLTSVISACELLGDRRLGRDIHAYVITTGFAV 330
Query: 196 NCFVSSALVDLYGKCGFVEDARRVFDEVLCRDLVLWNVMVSCYALNCLGDGAIAVFNLMR 255
+ V ++L +Y G +A ++F + +D+V W M+S Y N L D AI + +M
Sbjct: 331 DISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGYEYNFLPDKAIDTYRMMD 390
Query: 256 LEGMKGDYFTFSSLVNSCGTLGSSKLGRQIHGLVIKQSFDLDVLVATSLVDMYAKNGNID 315
+ +K D T ++++++C TLG G ++H L IK V+VA +L++MY+K ID
Sbjct: 391 QDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISYVIVANNLINMYSKCKCID 450
Query: 316 DACRVFDGMTAKNVVSWNTMVVGFGQNGDGREAVKLLRDMLQGSFCPDEVTLASILSSCG 375
A +F + KNV+SW +++ G N EA+ LR M + + P+ +TL + L++C
Sbjct: 451 KALDIFHNIPRKNVISWTSIIAGLRLNNRCFEALIFLRQM-KMTLQPNAITLTAALAACA 509
Query: 376 SLSISCETRQVHAYAIKNGVQAFLSIENALINAYSKCGSIAGALQCFGSVKEPDLVTWTS 435
+ +++HA+ ++ GV + NAL++ Y +CG + A F S K+ D+ +W
Sbjct: 510 RIGALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMNTAWSQFNSQKK-DVTSWNI 568
Query: 436 IIGAYAFHGLSKESIEVFEKMLSHAVRPDSIAFLEVLSACSHGGLVSEGLRYFNLMISDY 495
++ Y+ G +E+F++M+ VRPD I F+ +L CS +V +GL YF+ M DY
Sbjct: 569 LLTGYSERGQGSMVVELFDRMVKSRVRPDEITFISLLCGCSKSQMVRQGLMYFSKM-EDY 627
Query: 496 HILPDSEHYTCLTDLLGRVGLLVEAYDLLASMPIEPRSDTLGAFIGACKVHGSIGLAKWA 555
+ P+ +HY C+ DLLGR G L EA+ + MP+ P GA + AC++H I L + +
Sbjct: 628 GVTPNLKHYACVVDLLGRAGELQEAHKFIQKMPVTPDPAVWGALLNACRIHHKIDLGELS 687
Query: 556 AEKLLELEPSKPVNYALVSNVYASERCWFDVARLRKMMRDNCDHKVPGCSWIEIAGEIHT 615
A+ + EL+ Y L+ N+YA W +VA++R+MM++N GCSW+E+ G++H
Sbjct: 688 AQHIFELDKKSVGYYILLCNLYADCGKWREVAKVRRMMKENGLTVDAGCSWVEVKGKVHA 747
Query: 616 FVSSDRSHPQAVHMYAMLCTVFGLMEE 642
F+S D+ HPQ + +L + M E
Sbjct: 748 FLSDDKYHPQTKEINTVLEGFYEKMSE 774
Score = 215 bits (547), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 123/388 (31%), Positives = 210/388 (54%), Gaps = 4/388 (1%)
Query: 80 QQGKQLHSHIMKLGLCNKLSLQNQVLHVYVKCKAFDDMEKLFDEMRVRNIVTWNTLISGI 139
++G +++S + + L N L ++V+ D +F +M RN+ +WN L+ G
Sbjct: 111 EEGSKVYSIALSSMSSLGVELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGY 170
Query: 140 INCG---GNVTPYFRRMLLDNVRLDHITFNSLLRACVQADDIEVGRRLHSFILKVGFGLN 196
G + Y R + + V+ D TF +LR C D+ G+ +H +++ G+ L+
Sbjct: 171 AKQGYFDEAMCLYHRMLWVGGVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELD 230
Query: 197 CFVSSALVDLYGKCGFVEDARRVFDEVLCRDLVLWNVMVSCYALNCLGDGAIAVFNLMRL 256
V +AL+ +Y KCG V+ AR +FD + RD++ WN M+S Y N + + +F MR
Sbjct: 231 IDVVNALITMYVKCGDVKSARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRG 290
Query: 257 EGMKGDYFTFSSLVNSCGTLGSSKLGRQIHGLVIKQSFDLDVLVATSLVDMYAKNGNIDD 316
+ D T +S++++C LG +LGR IH VI F +D+ V SL MY G+ +
Sbjct: 291 LSVDPDLMTLTSVISACELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWRE 350
Query: 317 ACRVFDGMTAKNVVSWNTMVVGFGQNGDGREAVKLLRDMLQGSFCPDEVTLASILSSCGS 376
A ++F M K++VSW TM+ G+ N +A+ R M Q S PDE+T+A++LS+C +
Sbjct: 351 AEKLFSRMERKDIVSWTTMISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACAT 410
Query: 377 LSISCETRQVHAYAIKNGVQAFLSIENALINAYSKCGSIAGALQCFGSVKEPDLVTWTSI 436
L ++H AIK + +++ + N LIN YSKC I AL F ++ ++++WTSI
Sbjct: 411 LGDLDTGVELHKLAIKARLISYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSI 470
Query: 437 IGAYAFHGLSKESIEVFEKMLSHAVRPD 464
I + E++ +F + + ++P+
Sbjct: 471 IAGLRLNNRCFEAL-IFLRQMKMTLQPN 497
Score = 182 bits (463), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 110/376 (29%), Positives = 199/376 (52%), Gaps = 10/376 (2%)
Query: 158 VRLDHITFNSLLRACVQADDIEVGRRLHSFILKVGFGLNCFVSSALVDLYGKCGFVEDAR 217
V +D F +L+R C E G +++S L L + +A + ++ + G + DA
Sbjct: 90 VAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMSSLGVELGNAFLAMFVRFGNLVDAW 149
Query: 218 RVFDEVLCRDLVLWNVMVSCYALNCLGDGAIAVFN-LMRLEGMKGDYFTFSSLVNSCGTL 276
VF ++ R+L WNV+V YA D A+ +++ ++ + G+K D +TF ++ +CG +
Sbjct: 150 YVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGVKPDVYTFPCVLRTCGGI 209
Query: 277 GSSKLGRQIHGLVIKQSFDLDVLVATSLVDMYAKNGNIDDACRVFDGMTAKNVVSWNTMV 336
G+++H V++ ++LD+ V +L+ MY K G++ A +FD M ++++SWN M+
Sbjct: 210 PDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDRMPRRDIISWNAMI 269
Query: 337 VGFGQNGDGREAVKLLRDMLQGSFCPDEVTLASILSSCGSLSISCETRQVHAYAIKNGVQ 396
G+ +NG E ++L M S PD +TL S++S+C L R +HAY I G
Sbjct: 270 SGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRDIHAYVITTGFA 329
Query: 397 AFLSIENALINAYSKCGSIAGALQCFGSVKEPDLVTWTSIIGAYAFHGLSKESIEVFEKM 456
+S+ N+L Y GS A + F ++ D+V+WT++I Y ++ L ++I+ + M
Sbjct: 330 VDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGYEYNFLPDKAIDTYRMM 389
Query: 457 LSHAVRPDSIAFLEVLSACSHGGLVSEGLRYFNLMIS----DYHILPDSEHYTCLTDLLG 512
+V+PD I VLSAC+ G + G+ L I Y I+ ++ L ++
Sbjct: 390 DQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISYVIVANN-----LINMYS 444
Query: 513 RVGLLVEAYDLLASMP 528
+ + +A D+ ++P
Sbjct: 445 KCKCIDKALDIFHNIP 460
Score = 121 bits (303), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 117/231 (50%), Gaps = 1/231 (0%)
Query: 247 AIAVFNLMRLEGMKGDYFTFSSLVNSCGTLGSSKLGRQIHGLVIKQSFDLDVLVATSLVD 306
A+ + N M+ + D F +LV C + + G +++ + + L V + + +
Sbjct: 78 AMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMSSLGVELGNAFLA 137
Query: 307 MYAKNGNIDDACRVFDGMTAKNVVSWNTMVVGFGQNGDGREAVKLLRDMLQ-GSFCPDEV 365
M+ + GN+ DA VF M+ +N+ SWN +V G+ + G EA+ L ML G PD
Sbjct: 138 MFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGVKPDVY 197
Query: 366 TLASILSSCGSLSISCETRQVHAYAIKNGVQAFLSIENALINAYSKCGSIAGALQCFGSV 425
T +L +CG + ++VH + ++ G + + + NALI Y KCG + A F +
Sbjct: 198 TFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDRM 257
Query: 426 KEPDLVTWTSIIGAYAFHGLSKESIEVFEKMLSHAVRPDSIAFLEVLSACS 476
D+++W ++I Y +G+ E +E+F M +V PD + V+SAC
Sbjct: 258 PRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACE 308
Score = 85.9 bits (211), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 93/401 (23%), Positives = 176/401 (43%), Gaps = 49/401 (12%)
Query: 67 SQALKVSAKFGFLQQGKQLHSHIMKLGLCNKLSLQNQVLHVYVKCKAFDDMEKLFDEMRV 126
+ L A G L G +LH +K L + + + N ++++Y KCK D +F +
Sbjct: 402 AAVLSACATLGDLDTGVELHKLAIKARLISYVIVANNLINMYSKCKCIDKALDIFHNIPR 461
Query: 127 RNIVTWNTLISGI-INCGGNVTPYFRRMLLDNVRLDHITFNSLLRACVQADDIEVGRRLH 185
+N+++W ++I+G+ +N F R + ++ + IT + L AC + + G+ +H
Sbjct: 462 KNVISWTSIIAGLRLNNRCFEALIFLRQMKMTLQPNAITLTAALAACARIGALMCGKEIH 521
Query: 186 SFILKVGFGLNCFVSSALVDLYGKCGFVEDARRVFDEVLCRDLVLWNVMVSCYALNCLGD 245
+ +L+ G GL+ F+ +AL+D+Y +CG + A F+ +D+ WN++++ Y+ G
Sbjct: 522 AHVLRTGVGLDDFLPNALLDMYVRCGRMNTAWSQFNSQK-KDVTSWNILLTGYSERGQGS 580
Query: 246 GAIAVFNLMRLEGMKGDYFTFSSLVNSCGTLGSSKLGRQIHGLVIKQSFDLDVLVATSLV 305
+ +F+ M ++ D TF SL+ C S++ RQ GL
Sbjct: 581 MVVELFDRMVKSRVRPDEITFISLLCGC---SKSQMVRQ--GL----------------- 618
Query: 306 DMYAKNGNIDDACRVFDGMTAKNVVSWNTMVVGFGQNGDGREAVKLLRDMLQGSFCPDEV 365
MY ++ D N+ + +V G+ G+ +EA K ++ M PD
Sbjct: 619 -MYFS--------KMEDYGVTPNLKHYACVVDLLGRAGELQEAHKFIQKM---PVTPDPA 666
Query: 366 TLASILSSCGSLSISCETRQVHAYAIKNGVQAFLSIENALINAYSKCGSIAGALQCFGSV 425
++L++C + + ++ A I + + L N Y+ CG + +
Sbjct: 667 VWGALLNAC-RIHHKIDLGELSAQHIFELDKKSVGYYILLCNLYADCGKWREVAKVRRMM 725
Query: 426 KEPDLV-----TWTSIIGAY-------AFHGLSKESIEVFE 454
KE L +W + G +H +KE V E
Sbjct: 726 KENGLTVDAGCSWVEVKGKVHAFLSDDKYHPQTKEINTVLE 766
Score = 62.8 bits (151), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 57/250 (22%), Positives = 104/250 (41%), Gaps = 34/250 (13%)
Query: 338 GFGQNGDGREAVKLLRDMLQGSFCPDEVTLASILSSCGSLSISCETRQVHAYAIKNGVQA 397
G NG EA+KLL M + DE +++ C E +V++ A+ +
Sbjct: 68 GLCANGKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMSSL 127
Query: 398 FLSIENALINAYSKCGSIAGALQCFGSVKEPDLVTWTSIIGAYAFHGLSKESIEVFEKML 457
+ + NA + + + G++ A FG + E +L +W ++G YA G E++ ++ +ML
Sbjct: 128 GVELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRML 187
Query: 458 -SHAVRPDSIAFLEVLSACSHGGLVSEG-------LRY--------FNLMISDYHILPDS 501
V+PD F VL C ++ G +RY N +I+ Y D
Sbjct: 188 WVGGVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDV 247
Query: 502 EHYTCLTDLLGRVGLL------------------VEAYDLLASMPIEPRSDTLGAFIGAC 543
+ L D + R ++ +E + + + ++P TL + I AC
Sbjct: 248 KSARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISAC 307
Query: 544 KVHGSIGLAK 553
++ G L +
Sbjct: 308 ELLGDRRLGR 317
>sp|Q9M2Y7|PP274_ARATH Pentatricopeptide repeat-containing protein At3g49710
OS=Arabidopsis thaliana GN=PCMP-H79 PE=2 SV=1
Length = 721
Score = 343 bits (879), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 193/533 (36%), Positives = 300/533 (56%), Gaps = 14/533 (2%)
Query: 102 NQVLHVYVKCKAFDDMEKLFDEMRVRNIVTWNTLISGIINCGGNVTPY--FRRMLLDNVR 159
N ++ Y K +LFDE+ + V++NTLISG + F+RM
Sbjct: 78 NVIVKAYAKDSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFKRMRKLGFE 137
Query: 160 LDHITFNSLLRACVQADDIEVGRRLHSFILKVGFGLNCFVSSALVDLYGKCGFVEDARRV 219
+D T + L+ AC D +++ ++LH F + GF V++A V Y K G + +A V
Sbjct: 138 VDGFTLSGLIAAC--CDRVDLIKQLHCFSVSGGFDSYSSVNNAFVTYYSKGGLLREAVSV 195
Query: 220 F---DEVLCRDLVLWNVMVSCYALNCLGDGAIAVFNLMRLEGMKGDYFTFSSLVNSCGTL 276
F DE+ RD V WN M+ Y + G A+A++ M +G K D FT +S++N+ +L
Sbjct: 196 FYGMDEL--RDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNALTSL 253
Query: 277 GSSKLGRQIHGLVIKQSFDLDVLVATSLVDMYAKNGNID---DACRVFDGMTAKNVVSWN 333
GRQ HG +IK F + V + L+D Y+K G D D+ +VF + + ++V WN
Sbjct: 254 DHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEILSPDLVVWN 313
Query: 334 TMVVGFGQNGD-GREAVKLLRDMLQGSFCPDEVTLASILSSCGSLSISCETRQVHAYAIK 392
TM+ G+ N + EAVK R M + PD+ + + S+C +LS + +Q+H AIK
Sbjct: 314 TMISGYSMNEELSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQCKQIHGLAIK 373
Query: 393 NGVQA-FLSIENALINAYSKCGSIAGALQCFGSVKEPDLVTWTSIIGAYAFHGLSKESIE 451
+ + + +S+ NALI+ Y K G++ A F + E + V++ +I YA HG E++
Sbjct: 374 SHIPSNRISVNNALISLYYKSGNLQDARWVFDRMPELNAVSFNCMIKGYAQHGHGTEALL 433
Query: 452 VFEKMLSHAVRPDSIAFLEVLSACSHGGLVSEGLRYFNLMISDYHILPDSEHYTCLTDLL 511
++++ML + P+ I F+ VLSAC+H G V EG YFN M + I P++EHY+C+ DLL
Sbjct: 434 LYQRMLDSGIAPNKITFVAVLSACAHCGKVDEGQEYFNTMKETFKIEPEAEHYSCMIDLL 493
Query: 512 GRVGLLVEAYDLLASMPIEPRSDTLGAFIGACKVHGSIGLAKWAAEKLLELEPSKPVNYA 571
GR G L EA + +MP +P S A +GAC+ H ++ LA+ AA +L+ ++P Y
Sbjct: 494 GRAGKLEEAERFIDAMPYKPGSVAWAALLGACRKHKNMALAERAANELMVMQPLAATPYV 553
Query: 572 LVSNVYASERCWFDVARLRKMMRDNCDHKVPGCSWIEIAGEIHTFVSSDRSHP 624
+++N+YA R W ++A +RK MR K PGCSWIE+ + H FV+ D SHP
Sbjct: 554 MLANMYADARKWEEMASVRKSMRGKRIRKKPGCSWIEVKKKKHVFVAEDWSHP 606
Score = 162 bits (411), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 132/449 (29%), Positives = 210/449 (46%), Gaps = 41/449 (9%)
Query: 164 TFNSLLRACVQADDIEVGRRLHSFILKVGFGLNCFVSSALVDLYGKCG------------ 211
TF LL V D+ G+ LH+ +K + ++S+ V+LY KCG
Sbjct: 10 TFRDLLLKSVAERDLFTGKSLHALYVKSIVASSTYLSNHFVNLYSKCGRLSYARAAFYST 69
Query: 212 --------------FVED-----ARRVFDEVLCRDLVLWNVMVSCYALNCLGDGAIAVFN 252
+ +D AR++FDE+ D V +N ++S YA A+ +F
Sbjct: 70 EEPNVFSYNVIVKAYAKDSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFK 129
Query: 253 LMRLEGMKGDYFTFSSLVNSCGTLGSSKLGRQIHGLVIKQSFDLDVLVATSLVDMYAKNG 312
MR G + D FT S L+ +C L +Q+H + FD V + V Y+K G
Sbjct: 130 RMRKLGFEVDGFTLSGLIAAC--CDRVDLIKQLHCFSVSGGFDSYSSVNNAFVTYYSKGG 187
Query: 313 NIDDACRVFDGMTA-KNVVSWNTMVVGFGQNGDGREAVKLLRDMLQGSFCPDEVTLASIL 371
+ +A VF GM ++ VSWN+M+V +GQ+ +G +A+ L ++M+ F D TLAS+L
Sbjct: 188 LLREAVSVFYGMDELRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVL 247
Query: 372 SSCGSLSISCETRQVHAYAIKNGVQAFLSIENALINAYSKCGSIAG---ALQCFGSVKEP 428
++ SL RQ H IK G + + LI+ YSKCG G + + F + P
Sbjct: 248 NALTSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEILSP 307
Query: 429 DLVTWTSIIGAYAFH-GLSKESIEVFEKMLSHAVRPDSIAFLEVLSACSHGGLVSEGLRY 487
DLV W ++I Y+ + LS+E+++ F +M RPD +F+ V SACS+ S+ +
Sbjct: 308 DLVVWNTMISGYSMNEELSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQCKQI 367
Query: 488 FNLMISDYHILPDSEHYTCLTDLLGRVGLLVEAYDLLASMPIEPRSDTLGAFIGACKVHG 547
L I + L L + G L +A + MP E + + I HG
Sbjct: 368 HGLAIKSHIPSNRISVNNALISLYYKSGNLQDARWVFDRMP-ELNAVSFNCMIKGYAQHG 426
Query: 548 SIGLAKWAAEKLLE--LEPSKPVNYALVS 574
A +++L+ + P+K A++S
Sbjct: 427 HGTEALLLYQRMLDSGIAPNKITFVAVLS 455
>sp|Q9LU94|PP255_ARATH Putative pentatricopeptide repeat-containing protein At3g25970
OS=Arabidopsis thaliana GN=PCMP-E46 PE=3 SV=2
Length = 701
Score = 342 bits (878), Expect = 5e-93, Method: Compositional matrix adjust.
Identities = 187/575 (32%), Positives = 316/575 (54%), Gaps = 7/575 (1%)
Query: 66 YSQALKVSAKFGFLQQGKQLHSHIMKLGLCNKLSLQNQVLHVYVKCKAFDDMEKLFDEMR 125
+S+ LK A G+Q+H ++K G + + + ++ +Y KC+ +D + F E+
Sbjct: 104 FSRLLKGIASVKRFDLGEQVHGLVIKGGYECNVYVGSSLVDMYAKCERVEDAFEAFKEIS 163
Query: 126 VRNIVTWNTLISGIINCGGNVTPYFRRMLLD---NVRLDHITFNSLLRACVQADDIEVGR 182
N V+WN LI+G + T ++ L++ V +D TF LL + +
Sbjct: 164 EPNSVSWNALIAGFVQVRDIKTAFWLLGLMEMKAAVTMDAGTFAPLLTLLDDPMFCNLLK 223
Query: 183 RLHSFILKVGFGLNCFVSSALVDLYGKCGFVEDARRVFDEVL-CRDLVLWNVMVSCYALN 241
++H+ +LK+G + +A++ Y CG V DA+RVFD + +DL+ WN M++ ++ +
Sbjct: 224 QVHAKVLKLGLQHEITICNAMISSYADCGSVSDAKRVFDGLGGSKDLISWNSMIAGFSKH 283
Query: 242 CLGDGAIAVFNLMRLEGMKGDYFTFSSLVNSCGTLGSSKLGRQIHGLVIKQSFDLDVLVA 301
L + A +F M+ ++ D +T++ L+++C G+ +HG+VIK+ +
Sbjct: 284 ELKESAFELFIQMQRHWVETDIYTYTGLLSACSGEEHQIFGKSLHGMVIKKGLEQVTSAT 343
Query: 302 TSLVDMYAK--NGNIDDACRVFDGMTAKNVVSWNTMVVGFGQNGDGREAVKLLRDMLQGS 359
+L+ MY + G ++DA +F+ + +K+++SWN+++ GF Q G +AVK +
Sbjct: 344 NALISMYIQFPTGTMEDALSLFESLKSKDLISWNSIITGFAQKGLSEDAVKFFSYLRSSE 403
Query: 360 FCPDEVTLASILSSCGSLSISCETRQVHAYAIKNGVQAFLSIENALINAYSKCGSIAGAL 419
D+ +++L SC L+ +Q+HA A K+G + + ++LI YSKCG I A
Sbjct: 404 IKVDDYAFSALLRSCSDLATLQLGQQIHALATKSGFVSNEFVISSLIVMYSKCGIIESAR 463
Query: 420 QCFGSVKEP-DLVTWTSIIGAYAFHGLSKESIEVFEKMLSHAVRPDSIAFLEVLSACSHG 478
+CF + V W ++I YA HGL + S+++F +M + V+ D + F +L+ACSH
Sbjct: 464 KCFQQISSKHSTVAWNAMILGYAQHGLGQVSLDLFSQMCNQNVKLDHVTFTAILTACSHT 523
Query: 479 GLVSEGLRYFNLMISDYHILPDSEHYTCLTDLLGRVGLLVEAYDLLASMPIEPRSDTLGA 538
GL+ EGL NLM Y I P EHY DLLGR GL+ +A +L+ SMP+ P L
Sbjct: 524 GLIQEGLELLNLMEPVYKIQPRMEHYAAAVDLLGRAGLVNKAKELIESMPLNPDPMVLKT 583
Query: 539 FIGACKVHGSIGLAKWAAEKLLELEPSKPVNYALVSNVYASERCWFDVARLRKMMRDNCD 598
F+G C+ G I +A A LLE+EP Y +S++Y+ + W + A ++KMM++
Sbjct: 584 FLGVCRACGEIEMATQVANHLLEIEPEDHFTYVSLSHMYSDLKKWEEKASVKKMMKERGV 643
Query: 599 HKVPGCSWIEIAGEIHTFVSSDRSHPQAVHMYAML 633
KVPG SWIEI ++ F + DRS+P +Y M+
Sbjct: 644 KKVPGWSWIEIRNQVKAFNAEDRSNPLCQDIYMMI 678
Score = 201 bits (510), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 121/397 (30%), Positives = 206/397 (51%), Gaps = 6/397 (1%)
Query: 86 HSHIMKLGLCNKLSLQNQVLHVYVKCKAFDDMEKLFDEMRVRNIVTWNTLISGIINCGGN 145
H + +K G + + + N++L Y+K LFDEM R+ V+WNT+ISG +CG
Sbjct: 23 HCYAIKCGSISDIYVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSCGKL 82
Query: 146 VTPY--FRRMLLDNVRLDHITFNSLLRACVQADDIEVGRRLHSFILKVGFGLNCFVSSAL 203
+ F M +D +F+ LL+ ++G ++H ++K G+ N +V S+L
Sbjct: 83 EDAWCLFTCMKRSGSDVDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYECNVYVGSSL 142
Query: 204 VDLYGKCGFVEDARRVFDEVLCRDLVLWNVMVSCYALNCLGDGAIAVFNLMRLE-GMKGD 262
VD+Y KC VEDA F E+ + V WN +++ + A + LM ++ + D
Sbjct: 143 VDMYAKCERVEDAFEAFKEISEPNSVSWNALIAGFVQVRDIKTAFWLLGLMEMKAAVTMD 202
Query: 263 YFTFSSLVNSCGTLGSSKLGRQIHGLVIKQSFDLDVLVATSLVDMYAKNGNIDDACRVFD 322
TF+ L+ L +Q+H V+K ++ + +++ YA G++ DA RVFD
Sbjct: 203 AGTFAPLLTLLDDPMFCNLLKQVHAKVLKLGLQHEITICNAMISSYADCGSVSDAKRVFD 262
Query: 323 GM-TAKNVVSWNTMVVGFGQNGDGREAVKLLRDMLQGSFCPDEVTLASILSSCGSLSISC 381
G+ +K+++SWN+M+ GF ++ A +L M + D T +LS+C
Sbjct: 263 GLGGSKDLISWNSMIAGFSKHELKESAFELFIQMQRHWVETDIYTYTGLLSACSGEEHQI 322
Query: 382 ETRQVHAYAIKNGVQAFLSIENALINAYSK--CGSIAGALQCFGSVKEPDLVTWTSIIGA 439
+ +H IK G++ S NALI+ Y + G++ AL F S+K DL++W SII
Sbjct: 323 FGKSLHGMVIKKGLEQVTSATNALISMYIQFPTGTMEDALSLFESLKSKDLISWNSIITG 382
Query: 440 YAFHGLSKESIEVFEKMLSHAVRPDSIAFLEVLSACS 476
+A GLS+++++ F + S ++ D AF +L +CS
Sbjct: 383 FAQKGLSEDAVKFFSYLRSSEIKVDDYAFSALLRSCS 419
Score = 178 bits (452), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 114/332 (34%), Positives = 177/332 (53%), Gaps = 17/332 (5%)
Query: 185 HSFILKVGFGLNCFVSSALVDLYGKCGFVEDARRVFDEVLCRDLVLWNVMVSCYALNCLG 244
H + +K G + +VS+ ++D Y K GF+ A +FDE+ RD V WN M+S Y
Sbjct: 23 HCYAIKCGSISDIYVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSCGKL 82
Query: 245 DGAIAVFNLMRLEGMKGDYFTFSSLVNSCGTLGSSKLGRQIHGLVIKQSFDLDVLVATSL 304
+ A +F M+ G D ++FS L+ ++ LG Q+HGLVIK ++ +V V +SL
Sbjct: 83 EDAWCLFTCMKRSGSDVDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYECNVYVGSSL 142
Query: 305 VDMYAKNGNIDDACRVFDGMTAKNVVSWNTMVVGFGQNGDGREAVKLLRDM-LQGSFCPD 363
VDMYAK ++DA F ++ N VSWN ++ GF Q D + A LL M ++ + D
Sbjct: 143 VDMYAKCERVEDAFEAFKEISEPNSVSWNALIAGFVQVRDIKTAFWLLGLMEMKAAVTMD 202
Query: 364 EVTLASILSSCGSLSISCETRQVHAYAIKNGVQAFLSIENALINAYSKCGSIAGALQCF- 422
T A +L+ +QVHA +K G+Q ++I NA+I++Y+ CGS++ A + F
Sbjct: 203 AGTFAPLLTLLDDPMFCNLLKQVHAKVLKLGLQHEITICNAMISSYADCGSVSDAKRVFD 262
Query: 423 GSVKEPDLVTWTSIIGAYAFHGLSKESIEVFEKMLSHAVRPDSIAFLEVLSACS------ 476
G DL++W S+I ++ H L + + E+F +M H V D + +LSACS
Sbjct: 263 GLGGSKDLISWNSMIAGFSKHELKESAFELFIQMQRHWVETDIYTYTGLLSACSGEEHQI 322
Query: 477 -----HGGLVSEGLRYF----NLMISDYHILP 499
HG ++ +GL N +IS Y P
Sbjct: 323 FGKSLHGMVIKKGLEQVTSATNALISMYIQFP 354
>sp|Q9FWA6|PP207_ARATH Pentatricopeptide repeat-containing protein At3g02330
OS=Arabidopsis thaliana GN=PCMP-E90 PE=2 SV=2
Length = 903
Score = 342 bits (877), Expect = 5e-93, Method: Compositional matrix adjust.
Identities = 189/603 (31%), Positives = 316/603 (52%), Gaps = 24/603 (3%)
Query: 62 AHSFYSQALKVSAKFGFLQQGKQLHSHIMKLGLCNKLSLQNQVLHVYVKCKAFDDMEKLF 121
+ S Y+ L+ A L+ G QLH+H +K ++ L +Y KC D + LF
Sbjct: 280 SQSIYASVLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILF 339
Query: 122 DEMRVRNIVTWNTLISGIIN--CGGNVTPYFRRMLLDNVRLDHITFNSLLRACVQADDIE 179
D N ++N +I+G G F R++ + D I+ + + RAC +
Sbjct: 340 DNSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLS 399
Query: 180 VGRRLHSFILKVGFGLNCFVSSALVDLYGKCGFVEDARRVFDEVLCRDLVLWNVMVSCYA 239
G +++ +K L+ V++A +D+YGKC + +A RVFDE+ RD V WN +++ +
Sbjct: 400 EGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHE 459
Query: 240 LNCLGDGAIAVFNLMRLEGMKGDYFTFSSLVNSCGTLGSSKLGRQIHGLVIKQSFDLDVL 299
N G + +F M ++ D FTF S++ +C T GS G +IH ++K +
Sbjct: 460 QNGKGYETLFLFVSMLRSRIEPDEFTFGSILKAC-TGGSLGYGMEIHSSIVKSGMASNSS 518
Query: 300 VATSLVDMYAKNGNIDDACRV----------------FDGMTAKNV----VSWNTMVVGF 339
V SL+DMY+K G I++A ++ + M K + VSWN+++ G+
Sbjct: 519 VGCSLIDMYSKCGMIEEAEKIHSRFFQRANVSGTMEELEKMHNKRLQEMCVSWNSIISGY 578
Query: 340 GQNGDGREAVKLLRDMLQGSFCPDEVTLASILSSCGSLSISCETRQVHAYAIKNGVQAFL 399
+A L M++ PD+ T A++L +C +L+ + +Q+HA IK +Q+ +
Sbjct: 579 VMKEQSEDAQMLFTRMMEMGITPDKFTYATVLDTCANLASAGLGKQIHAQVIKKELQSDV 638
Query: 400 SIENALINAYSKCGSIAGALQCFGSVKEPDLVTWTSIIGAYAFHGLSKESIEVFEKMLSH 459
I + L++ YSKCG + + F D VTW ++I YA HG +E+I++FE+M+
Sbjct: 639 YICSTLVDMYSKCGDLHDSRLMFEKSLRRDFVTWNAMICGYAHHGKGEEAIQLFERMILE 698
Query: 460 AVRPDSIAFLEVLSACSHGGLVSEGLRYFNLMISDYHILPDSEHYTCLTDLLGRVGLLVE 519
++P+ + F+ +L AC+H GL+ +GL YF +M DY + P HY+ + D+LG+ G +
Sbjct: 699 NIKPNHVTFISILRACAHMGLIDKGLEYFYMMKRDYGLDPQLPHYSNMVDILGKSGKVKR 758
Query: 520 AYDLLASMPIEPRSDTLGAFIGACKVH-GSIGLAKWAAEKLLELEPSKPVNYALVSNVYA 578
A +L+ MP E +G C +H ++ +A+ A LL L+P Y L+SNVYA
Sbjct: 759 ALELIREMPFEADDVIWRTLLGVCTIHRNNVEVAEEATAALLRLDPQDSSAYTLLSNVYA 818
Query: 579 SERCWFDVARLRKMMRDNCDHKVPGCSWIEIAGEIHTFVSSDRSHPQAVHMYAMLCTVFG 638
W V+ LR+ MR K PGCSW+E+ E+H F+ D++HP+ +Y L ++
Sbjct: 819 DAGMWEKVSDLRRNMRGFKLKKEPGCSWVELKDELHVFLVGDKAHPRWEEIYEELGLIYS 878
Query: 639 LME 641
M+
Sbjct: 879 EMK 881
Score = 204 bits (518), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 133/488 (27%), Positives = 234/488 (47%), Gaps = 35/488 (7%)
Query: 66 YSQALKVSAKFGFLQQGKQLHSHIMKLGLCNKLSLQNQVLHVYVKCKAFDDMEKLFDEMR 125
+S K AK G L+ GKQ H+H++ G + N +L VY + F +FD+M
Sbjct: 51 FSFVFKECAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDKMP 110
Query: 126 VRNIVTWNTLISGI--------INCGGNVTPY-------------------------FRR 152
+R++V+WN +I+G N N+ P F
Sbjct: 111 LRDVVSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVD 170
Query: 153 MLLDNVRLDHITFNSLLRACVQADDIEVGRRLHSFILKVGFGLNCFVSSALVDLYGKCGF 212
M + + D TF +L+ C +D +G ++H +++VG + +SAL+D+Y K
Sbjct: 171 MGREGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKR 230
Query: 213 VEDARRVFDEVLCRDLVLWNVMVSCYALNCLGDGAIAVFNLMRLEGMKGDYFTFSSLVNS 272
++ RVF + ++ V W+ +++ N L A+ F M+ ++S++ S
Sbjct: 231 FVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRS 290
Query: 273 CGTLGSSKLGRQIHGLVIKQSFDLDVLVATSLVDMYAKNGNIDDACRVFDGMTAKNVVSW 332
C L +LG Q+H +K F D +V T+ +DMYAK N+ DA +FD N S+
Sbjct: 291 CAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSY 350
Query: 333 NTMVVGFGQNGDGREAVKLLRDMLQGSFCPDEVTLASILSSCGSLSISCETRQVHAYAIK 392
N M+ G+ Q G +A+ L ++ DE++L+ + +C + E Q++ AIK
Sbjct: 351 NAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIK 410
Query: 393 NGVQAFLSIENALINAYSKCGSIAGALQCFGSVKEPDLVTWTSIIGAYAFHGLSKESIEV 452
+ + + + NA I+ Y KC ++A A + F ++ D V+W +II A+ +G E++ +
Sbjct: 411 SSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFL 470
Query: 453 FEKMLSHAVRPDSIAFLEVLSACSHGGLVSEGLRYFNLMISDYHILPDSEHYTCLTDLLG 512
F ML + PD F +L AC+ GG + G+ + ++ + +S L D+
Sbjct: 471 FVSMLRSRIEPDEFTFGSILKACT-GGSLGYGMEIHSSIVKS-GMASNSSVGCSLIDMYS 528
Query: 513 RVGLLVEA 520
+ G++ EA
Sbjct: 529 KCGMIEEA 536
Score = 152 bits (385), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 116/434 (26%), Positives = 209/434 (48%), Gaps = 33/434 (7%)
Query: 126 VRNIVTWNTLISGIINCGGNVT-PYFRRMLLDNVRLDHITFNSLLRACVQADDIEVGRRL 184
R++V++N ++ I+ + YF L + F+ + + C + +E+G++
Sbjct: 11 TRSVVSFNRCLTEKISYRRVPSFSYFTDFLNQVNSVSTTNFSFVFKECAKQGALELGKQA 70
Query: 185 HSFILKVGFGLNCFVSSALVDLYGKCGFVEDARRVFDEVLCRDLVLWNVMVSCY------ 238
H+ ++ GF FV + L+ +Y A VFD++ RD+V WN M++ Y
Sbjct: 71 HAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDKMPLRDVVSWNKMINGYSKSNDM 130
Query: 239 ----------------ALNCLGDG---------AIAVFNLMRLEGMKGDYFTFSSLVNSC 273
+ N + G +I VF M EG++ D TF+ ++ C
Sbjct: 131 FKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIEFDGRTFAIILKVC 190
Query: 274 GTLGSSKLGRQIHGLVIKQSFDLDVLVATSLVDMYAKNGNIDDACRVFDGMTAKNVVSWN 333
L + LG QIHG+V++ D DV+ A++L+DMYAK ++ RVF G+ KN VSW+
Sbjct: 191 SFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQGIPEKNSVSWS 250
Query: 334 TMVVGFGQNGDGREAVKLLRDMLQGSFCPDEVTLASILSSCGSLSISCETRQVHAYAIKN 393
++ G QN A+K ++M + + + AS+L SC +LS Q+HA+A+K+
Sbjct: 251 AIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSELRLGGQLHAHALKS 310
Query: 394 GVQAFLSIENALINAYSKCGSIAGALQCFGSVKEPDLVTWTSIIGAYAFHGLSKESIEVF 453
A + A ++ Y+KC ++ A F + + + ++ ++I Y+ +++ +F
Sbjct: 311 DFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITGYSQEEHGFKALLLF 370
Query: 454 EKMLSHAVRPDSIAFLEVLSACSHGGLVSEGLRYFNLMISDYHILPDSEHYTCLTDLLGR 513
+++S + D I+ V AC+ +SEGL+ + L I L D D+ G+
Sbjct: 371 HRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSL-DVCVANAAIDMYGK 429
Query: 514 VGLLVEAYDLLASM 527
L EA+ + M
Sbjct: 430 CQALAEAFRVFDEM 443
>sp|Q9LW63|PP251_ARATH Putative pentatricopeptide repeat-containing protein At3g23330
OS=Arabidopsis thaliana GN=PCMP-H32 PE=3 SV=1
Length = 715
Score = 340 bits (873), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 200/637 (31%), Positives = 325/637 (51%), Gaps = 43/637 (6%)
Query: 61 SAHSFYSQALKVSAKFGFLQQGKQLHSHIMKLGLCNKLSLQNQVLHVYVKCKAFDDMEKL 120
S+ + +K + Q KQLH+ ++ + S + V+ +Y K + L
Sbjct: 3 SSKALIKTLIKNPTRIKSKSQAKQLHAQFIRTQSLSHTS-ASIVISIYTNLKLLHEALLL 61
Query: 121 FDEMRVRNIVTWNTLISGIINCG--GNVTPYFRRMLLDNVRLDHITFNSLLRACVQADDI 178
F ++ ++ W ++I + F M DH F S+L++C D+
Sbjct: 62 FKTLKSPPVLAWKSVIRCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDL 121
Query: 179 EVGRRLHSFILKVGFGLNCFVSSALVDLYGK---------CGFVED-------------- 215
G +H FI+++G + + +AL+++Y K G V D
Sbjct: 122 RFGESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDV 181
Query: 216 -------------ARRVFDEVLCRDLVLWNVMVSCYALNCLGDGAIAVFNLMRLEGMKGD 262
RRVF+ + +D+V +N +++ YA + + + A+ + M +K D
Sbjct: 182 KAETCIMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPD 241
Query: 263 YFTFSSLVNSCGTLGSSKLGRQIHGLVIKQSFDLDVLVATSLVDMYAKNGNIDDACRVFD 322
FT SS++ G++IHG VI++ D DV + +SLVDMYAK+ I+D+ RVF
Sbjct: 242 SFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFS 301
Query: 323 GMTAKNVVSWNTMVVGFGQNGDGREAVKLLRDMLQGSFCPDEVTLASILSSCGSLSISCE 382
+ ++ +SWN++V G+ QNG EA++L R M+ P V +S++ +C L+
Sbjct: 302 RLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHL 361
Query: 383 TRQVHAYAIKNGVQAFLSIENALINAYSKCGSIAGALQCFGSVKEPDLVTWTSIIGAYAF 442
+Q+H Y ++ G + + I +AL++ YSKCG+I A + F + D V+WT+II +A
Sbjct: 362 GKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHAL 421
Query: 443 HGLSKESIEVFEKMLSHAVRPDSIAFLEVLSACSHGGLVSEGLRYFNLMISDYHILPDSE 502
HG E++ +FE+M V+P+ +AF+ VL+ACSH GLV E YFN M Y + + E
Sbjct: 422 HGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELE 481
Query: 503 HYTCLTDLLGRVGLLVEAYDLLASMPIEPRSDTLGAFIGACKVHGSIGLAKWAAEKLLEL 562
HY + DLLGR G L EAY+ ++ M +EP + +C VH ++ LA+ AEK+ +
Sbjct: 482 HYAAVADLLGRAGKLEEAYNFISKMCVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIFTV 541
Query: 563 EPSKPVNYALVSNVYASERCWFDVARLRKMMRDNCDHKVPGCSWIEIAGEIHTFVSSDRS 622
+ Y L+ N+YAS W ++A+LR MR K P CSWIE+ + H FVS DRS
Sbjct: 542 DSENMGAYVLMCNMYASNGRWKEMAKLRLRMRKKGLRKKPACSWIEMKNKTHGFVSGDRS 601
Query: 623 HPQAVHMYAMLCTVFGLMEEN----NVSGHCNVLDKE 655
HP + L V ME+ + SG + +D+E
Sbjct: 602 HPSMDKINEFLKAVMEQMEKEGYVADTSGVLHDVDEE 638
>sp|Q9SUH6|PP341_ARATH Pentatricopeptide repeat-containing protein At4g30700
OS=Arabidopsis thaliana GN=DYW9 PE=2 SV=1
Length = 792
Score = 340 bits (873), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 199/608 (32%), Positives = 316/608 (51%), Gaps = 22/608 (3%)
Query: 54 TIHESTHSAHSFYSQ--------------ALKVSAKFGFL--QQGKQLHSHIMKLGLCNK 97
+++ES HS+ S ++ A +SA GF + G+ +H + G ++
Sbjct: 94 SVNESPHSSLSVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAGRVIHGQAVVDGCDSE 153
Query: 98 LSLQNQVLHVYVKCKAFDDMEKLFDEMRVRNIVTWNTLISGIINCGGNVTP--YFRRMLL 155
L L + ++ +Y K +D K+FD M ++ + WNT+ISG V FR ++
Sbjct: 154 LLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLIN 213
Query: 156 DN-VRLDHITFNSLLRACVQADDIEVGRRLHSFILKVGFGLNCFVSSALVDLYGKCGFVE 214
++ RLD T +L A + ++ +G ++HS K G + +V + + LY KCG ++
Sbjct: 214 ESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIK 273
Query: 215 DARRVFDEVLCRDLVLWNVMVSCYALNCLGDGAIAVFNLMRLEGMKGDYFTFSSLVNSCG 274
+F E D+V +N M+ Y N + ++++F + L G + T SLV G
Sbjct: 274 MGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSSTLVSLVPVSG 333
Query: 275 TLGSSKLGRQIHGLVIKQSFDLDVLVATSLVDMYAKNGNIDDACRVFDGMTAKNVVSWNT 334
L L IHG +K +F V+T+L +Y+K I+ A ++FD K++ SWN
Sbjct: 334 HL---MLIYAIHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNA 390
Query: 335 MVVGFGQNGDGREAVKLLRDMLQGSFCPDEVTLASILSSCGSLSISCETRQVHAYAIKNG 394
M+ G+ QNG +A+ L R+M + F P+ VT+ ILS+C L + VH
Sbjct: 391 MISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTD 450
Query: 395 VQAFLSIENALINAYSKCGSIAGALQCFGSVKEPDLVTWTSIIGAYAFHGLSKESIEVFE 454
++ + + ALI Y+KCGSIA A + F + + + VTW ++I Y HG +E++ +F
Sbjct: 451 FESSIYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQGQEALNIFY 510
Query: 455 KMLSHAVRPDSIAFLEVLSACSHGGLVSEGLRYFNLMISDYHILPDSEHYTCLTDLLGRV 514
+ML+ + P + FL VL ACSH GLV EG FN MI Y P +HY C+ D+LGR
Sbjct: 511 EMLNSGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACMVDILGRA 570
Query: 515 GLLVEAYDLLASMPIEPRSDTLGAFIGACKVHGSIGLAKWAAEKLLELEPSKPVNYALVS 574
G L A + +M IEP S +GAC++H LA+ +EKL EL+P + L+S
Sbjct: 571 GHLQRALQFIEAMSIEPGSSVWETLLGACRIHKDTNLARTVSEKLFELDPDNVGYHVLLS 630
Query: 575 NVYASERCWFDVARLRKMMRDNCDHKVPGCSWIEIAGEIHTFVSSDRSHPQAVHMYAMLC 634
N+++++R + A +R+ + K PG + IEI H F S D+SHPQ +Y L
Sbjct: 631 NIHSADRNYPQAATVRQTAKKRKLAKAPGYTLIEIGETPHVFTSGDQSHPQVKEIYEKLE 690
Query: 635 TVFGLMEE 642
+ G M E
Sbjct: 691 KLEGKMRE 698
Score = 127 bits (319), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 84/322 (26%), Positives = 162/322 (50%), Gaps = 4/322 (1%)
Query: 163 ITFNSLLRACVQADDIEVGRRLHSFILKVGFGLNCFVSSALVDLYGKCGFVEDARRVFDE 222
I+ N+ L ++ I + H+ I+ GF + + + L G + AR +F
Sbjct: 18 ISKNTYLDFFKRSTSISHLAQTHAQIILHGFRNDISLLTKLTQRLSDLGAIYYARDIFLS 77
Query: 223 VLCRDLVLWNVMVSCYALNCLGDGAIAVF-NLMRLEGMKGDYFTFSSLVNSCGTLGSSKL 281
V D+ L+NV++ +++N +++VF +L + +K + T++ +++ +
Sbjct: 78 VQRPDVFLFNVLMRGFSVNESPHSSLSVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRA 137
Query: 282 GRQIHGLVIKQSFDLDVLVATSLVDMYAKNGNIDDACRVFDGMTAKNVVSWNTMVVGFGQ 341
GR IHG + D ++L+ +++V MY K ++DA +VFD M K+ + WNTM+ G+ +
Sbjct: 138 GRVIHGQAVVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRK 197
Query: 342 NGDGREAVKLLRDMLQGSFCP--DEVTLASILSSCGSLSISCETRQVHAYAIKNGVQAFL 399
N E++++ RD++ S C D TL IL + L Q+H+ A K G +
Sbjct: 198 NEMYVESIQVFRDLINES-CTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHD 256
Query: 400 SIENALINAYSKCGSIAGALQCFGSVKEPDLVTWTSIIGAYAFHGLSKESIEVFEKMLSH 459
+ I+ YSKCG I F ++PD+V + ++I Y +G ++ S+ +F++++
Sbjct: 257 YVLTGFISLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLS 316
Query: 460 AVRPDSIAFLEVLSACSHGGLV 481
R S + ++ H L+
Sbjct: 317 GARLRSSTLVSLVPVSGHLMLI 338
>sp|Q9LYV3|PP377_ARATH Putative pentatricopeptide repeat-containing protein At5g13230,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H89 PE=3
SV=1
Length = 822
Score = 339 bits (869), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 208/629 (33%), Positives = 334/629 (53%), Gaps = 22/629 (3%)
Query: 16 KRPLSYLTPALYQNQTTTITNAQKH---DRSVLSSQLRNSGTIHE-STHSAHSFYSQALK 71
K L+ +N + +T AQ + D L S+L G HE + H SF LK
Sbjct: 101 KDALNLFDEMPERNNVSFVTLAQGYACQDPIGLYSRLHREG--HELNPHVFTSF----LK 154
Query: 72 VSAKFGFLQQGKQLHSHIMKLGLCNKLSLQNQVLHVYVKCKAFDDMEKLFDEMRVRNIVT 131
+ + LHS I+KLG + + +++ Y C + D +F+ + ++IV
Sbjct: 155 LFVSLDKAEICPWLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARTVFEGILCKDIVV 214
Query: 132 WNTLISGIINCGGNVTPYFRR--MLLDNVRL-----DHITFNSLLRACVQADDIEVGRRL 184
W ++S + G YF LL +R+ ++ TF++ L+A + + + +
Sbjct: 215 WAGIVSCYVENG-----YFEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAKGV 269
Query: 185 HSFILKVGFGLNCFVSSALVDLYGKCGFVEDARRVFDEVLCRDLVLWNVMVSCYALNCLG 244
H ILK + L+ V L+ LY + G + DA +VF+E+ D+V W+ M++ + N
Sbjct: 270 HGQILKTCYVLDPRVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFC 329
Query: 245 DGAIAVFNLMRLEGMKGDYFTFSSLVNSCGTLGSSKLGRQIHGLVIKQSFDLDVLVATSL 304
+ A+ +F MR + + FT SS++N C S LG Q+HGLV+K FDLD+ V+ +L
Sbjct: 330 NEAVDLFIRMREAFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDIYVSNAL 389
Query: 305 VDMYAKNGNIDDACRVFDGMTAKNVVSWNTMVVGFGQNGDGREAVKLLRDMLQGSFCPDE 364
+D+YAK +D A ++F +++KN VSWNT++VG+ G+G +A + R+ L+ E
Sbjct: 390 IDVYAKCEKMDTAVKLFAELSSKNEVSWNTVIVGYENLGEGGKAFSMFREALRNQVSVTE 449
Query: 365 VTLASILSSCGSLSISCETRQVHAYAIKNGVQAFLSIENALINAYSKCGSIAGALQCFGS 424
VT +S L +C SL+ QVH AIK +++ N+LI+ Y+KCG I A F
Sbjct: 450 VTFSSALGACASLASMDLGVQVHGLAIKTNNAKKVAVSNSLIDMYAKCGDIKFAQSVFNE 509
Query: 425 VKEPDLVTWTSIIGAYAFHGLSKESIEVFEKMLSHAVRPDSIAFLEVLSACSHGGLVSEG 484
++ D+ +W ++I Y+ HGL ++++ + + M +P+ + FL VLS CS+ GL+ +G
Sbjct: 510 METIDVASWNALISGYSTHGLGRQALRILDIMKDRDCKPNGLTFLGVLSGCSNAGLIDQG 569
Query: 485 LRYFNLMISDYHILPDSEHYTCLTDLLGRVGLLVEAYDLLASMPIEPRSDTLGAFIGACK 544
F MI D+ I P EHYTC+ LLGR G L +A L+ +P EP A + A
Sbjct: 570 QECFESMIRDHGIEPCLEHYTCMVRLLGRSGQLDKAMKLIEGIPYEPSVMIWRAMLSASM 629
Query: 545 VHGSIGLAKWAAEKLLELEPSKPVNYALVSNVYASERCWFDVARLRKMMRDNCDHKVPGC 604
+ A+ +AE++L++ P Y LVSN+YA + W +VA +RK M++ K PG
Sbjct: 630 NQNNEEFARRSAEEILKINPKDEATYVLVSNMYAGAKQWANVASIRKSMKEMGVKKEPGL 689
Query: 605 SWIEIAGEIHTFVSSDRSHPQAVHMYAML 633
SWIE G++H F HP + ML
Sbjct: 690 SWIEHQGDVHYFSVGLSDHPDMKLINGML 718
Score = 224 bits (571), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 134/411 (32%), Positives = 214/411 (52%), Gaps = 2/411 (0%)
Query: 82 GKQLHSHIMKLGLCNKLSLQNQVLHVYVKCKAFDDMEKLFDEMRVRNIVTWNTLISGIIN 141
K +H I+K G C L N +L+ YVK D LFDEM RN V++ TL G
Sbjct: 68 AKAIHCDILKKGSCLDLFATNILLNAYVKAGFDKDALNLFDEMPERNNVSFVTLAQGYA- 126
Query: 142 CGGNVTPYFRRMLLDNVRLDHITFNSLLRACVQADDIEVGRRLHSFILKVGFGLNCFVSS 201
C + Y R+ + L+ F S L+ V D E+ LHS I+K+G+ N FV +
Sbjct: 127 CQDPIGLY-SRLHREGHELNPHVFTSFLKLFVSLDKAEICPWLHSPIVKLGYDSNAFVGA 185
Query: 202 ALVDLYGKCGFVEDARRVFDEVLCRDLVLWNVMVSCYALNCLGDGAIAVFNLMRLEGMKG 261
AL++ Y CG V+ AR VF+ +LC+D+V+W +VSCY N + ++ + + MR+ G
Sbjct: 186 ALINAYSVCGSVDSARTVFEGILCKDIVVWAGIVSCYVENGYFEDSLKLLSCMRMAGFMP 245
Query: 262 DYFTFSSLVNSCGTLGSSKLGRQIHGLVIKQSFDLDVLVATSLVDMYAKNGNIDDACRVF 321
+ +TF + + + LG+ + +HG ++K + LD V L+ +Y + G++ DA +VF
Sbjct: 246 NNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDPRVGVGLLQLYTQLGDMSDAFKVF 305
Query: 322 DGMTAKNVVSWNTMVVGFGQNGDGREAVKLLRDMLQGSFCPDEVTLASILSSCGSLSISC 381
+ M +VV W+ M+ F QNG EAV L M + P+E TL+SIL+ C S
Sbjct: 306 NEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPNEFTLSSILNGCAIGKCSG 365
Query: 382 ETRQVHAYAIKNGVQAFLSIENALINAYSKCGSIAGALQCFGSVKEPDLVTWTSIIGAYA 441
Q+H +K G + + NALI+ Y+KC + A++ F + + V+W ++I Y
Sbjct: 366 LGEQLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAVKLFAELSSKNEVSWNTVIVGYE 425
Query: 442 FHGLSKESIEVFEKMLSHAVRPDSIAFLEVLSACSHGGLVSEGLRYFNLMI 492
G ++ +F + L + V + F L AC+ + G++ L I
Sbjct: 426 NLGEGGKAFSMFREALRNQVSVTEVTFSSALGACASLASMDLGVQVHGLAI 476
Score = 135 bits (340), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 84/333 (25%), Positives = 166/333 (49%), Gaps = 4/333 (1%)
Query: 160 LDHITFNSLLRACVQADDIEVGRRLHSFILKVGFGLNCFVSSALVDLYGKCGFVEDARRV 219
LD + ++LR C+Q +D + +H ILK G L+ F ++ L++ Y K GF +DA +
Sbjct: 47 LDSHAYGAMLRRCIQKNDPISAKAIHCDILKKGSCLDLFATNILLNAYVKAGFDKDALNL 106
Query: 220 FDEVLCRDLVLWNVMVSCYALNCLGDGAIAVFNLMRLEGMKGDYFTFSSLVNSCGTLGSS 279
FDE+ R+ V + + YA I +++ + EG + + F+S + +L +
Sbjct: 107 FDEMPERNNVSFVTLAQGYACQ----DPIGLYSRLHREGHELNPHVFTSFLKLFVSLDKA 162
Query: 280 KLGRQIHGLVIKQSFDLDVLVATSLVDMYAKNGNIDDACRVFDGMTAKNVVSWNTMVVGF 339
++ +H ++K +D + V +L++ Y+ G++D A VF+G+ K++V W +V +
Sbjct: 163 EICPWLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARTVFEGILCKDIVVWAGIVSCY 222
Query: 340 GQNGDGREAVKLLRDMLQGSFCPDEVTLASILSSCGSLSISCETRQVHAYAIKNGVQAFL 399
+NG +++KLL M F P+ T + L + L + VH +K
Sbjct: 223 VENGYFEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDP 282
Query: 400 SIENALINAYSKCGSIAGALQCFGSVKEPDLVTWTSIIGAYAFHGLSKESIEVFEKMLSH 459
+ L+ Y++ G ++ A + F + + D+V W+ +I + +G E++++F +M
Sbjct: 283 RVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREA 342
Query: 460 AVRPDSIAFLEVLSACSHGGLVSEGLRYFNLMI 492
V P+ +L+ C+ G G + L++
Sbjct: 343 FVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVV 375
>sp|Q9CAY1|PP223_ARATH Putative pentatricopeptide repeat-containing protein At3g11460
OS=Arabidopsis thaliana GN=PCMP-H52 PE=3 SV=1
Length = 623
Score = 338 bits (866), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 178/486 (36%), Positives = 266/486 (54%), Gaps = 2/486 (0%)
Query: 150 FRRMLLDNVRLDHITFNSLLRACVQADDIEVGRRLHSFILKVGFGLNCFVSSALVDLYGK 209
+R ML D +F +L++C G++LH + K G FV +AL+ +Y K
Sbjct: 41 YRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCHVTKGGCETEPFVLTALISMYCK 100
Query: 210 CGFVEDARRVFDE--VLCRDLVLWNVMVSCYALNCLGDGAIAVFNLMRLEGMKGDYFTFS 267
CG V DAR+VF+E + V +N ++S Y N A +F M+ G+ D T
Sbjct: 101 CGLVADARKVFEENPQSSQLSVCYNALISGYTANSKVTDAAYMFRRMKETGVSVDSVTML 160
Query: 268 SLVNSCGTLGSSKLGRQIHGLVIKQSFDLDVLVATSLVDMYAKNGNIDDACRVFDGMTAK 327
LV C LGR +HG +K D +V V S + MY K G+++ R+FD M K
Sbjct: 161 GLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVLNSFITMYMKCGSVEAGRRLFDEMPVK 220
Query: 328 NVVSWNTMVVGFGQNGDGREAVKLLRDMLQGSFCPDEVTLASILSSCGSLSISCETRQVH 387
+++WN ++ G+ QNG + ++L M CPD TL S+LSSC L +V
Sbjct: 221 GLITWNAVISGYSQNGLAYDVLELYEQMKSSGVCPDPFTLVSVLSSCAHLGAKKIGHEVG 280
Query: 388 AYAIKNGVQAFLSIENALINAYSKCGSIAGALQCFGSVKEPDLVTWTSIIGAYAFHGLSK 447
NG + + NA I+ Y++CG++A A F + LV+WT++IG Y HG+ +
Sbjct: 281 KLVESNGFVPNVFVSNASISMYARCGNLAKARAVFDIMPVKSLVSWTAMIGCYGMHGMGE 340
Query: 448 ESIEVFEKMLSHAVRPDSIAFLEVLSACSHGGLVSEGLRYFNLMISDYHILPDSEHYTCL 507
+ +F+ M+ +RPD F+ VLSACSH GL +GL F M +Y + P EHY+CL
Sbjct: 341 IGLMLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKGLELFRAMKREYKLEPGPEHYSCL 400
Query: 508 TDLLGRVGLLVEAYDLLASMPIEPRSDTLGAFIGACKVHGSIGLAKWAAEKLLELEPSKP 567
DLLGR G L EA + + SMP+EP GA +GACK+H ++ +A+ A K++E EP+
Sbjct: 401 VDLLGRAGRLDEAMEFIESMPVEPDGAVWGALLGACKIHKNVDMAELAFAKVIEFEPNNI 460
Query: 568 VNYALVSNVYASERCWFDVARLRKMMRDNCDHKVPGCSWIEIAGEIHTFVSSDRSHPQAV 627
Y L+SN+Y+ + + R+R MMR+ K PG S++E G +H F++ DRSH Q
Sbjct: 461 GYYVLMSNIYSDSKNQEGIWRIRVMMRERAFRKKPGYSYVEHKGRVHLFLAGDRSHEQTE 520
Query: 628 HMYAML 633
++ ML
Sbjct: 521 EVHRML 526
Score = 182 bits (462), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 123/436 (28%), Positives = 212/436 (48%), Gaps = 18/436 (4%)
Query: 70 LKVSAKFGFLQQGKQLHSHIMKLGLCNKLSLQNQVLHVYVKCKAFDDMEKLFDE--MRVR 127
LK A G+QLH H+ K G + + ++ +Y KC D K+F+E +
Sbjct: 60 LKSCASLSLPVSGQQLHCHVTKGGCETEPFVLTALISMYCKCGLVADARKVFEENPQSSQ 119
Query: 128 NIVTWNTLISGIINCGGNVTP---YFRRMLLDNVRLDHITFNSLLRACVQADDIEVGRRL 184
V +N LISG VT FRRM V +D +T L+ C + + +GR L
Sbjct: 120 LSVCYNALISG-YTANSKVTDAAYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSL 178
Query: 185 HSFILKVGFGLNCFVSSALVDLYGKCGFVEDARRVFDEVLCRDLVLWNVMVSCYALNCLG 244
H +K G V ++ + +Y KCG VE RR+FDE+ + L+ WN ++S Y+ N L
Sbjct: 179 HGQCVKGGLDSEVAVLNSFITMYMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLA 238
Query: 245 DGAIAVFNLMRLEGMKGDYFTFSSLVNSCGTLGSSKLGRQIHGLVIKQSFDLDVLVATSL 304
+ ++ M+ G+ D FT S+++SC LG+ K+G ++ LV F +V V+ +
Sbjct: 239 YDVLELYEQMKSSGVCPDPFTLVSVLSSCAHLGAKKIGHEVGKLVESNGFVPNVFVSNAS 298
Query: 305 VDMYAKNGNIDDACRVFDGMTAKNVVSWNTMVVGFGQNGDGREAVKLLRDMLQGSFCPDE 364
+ MYA+ GN+ A VFD M K++VSW M+ +G +G G + L DM++ PD
Sbjct: 299 ISMYARCGNLAKARAVFDIMPVKSLVSWTAMIGCYGMHGMGEIGLMLFDDMIKRGIRPDG 358
Query: 365 VTLASILSSCGSLSISCETRQV-----HAYAIKNGVQAFLSIENALINAYSKCGSIAGAL 419
+LS+C ++ + ++ Y ++ G + + + L++ + G + A+
Sbjct: 359 AVFVMVLSACSHSGLTDKGLELFRAMKREYKLEPGPEHY----SCLVDLLGRAGRLDEAM 414
Query: 420 QCFGSVK-EPDLVTWTSIIGAYAFHGLSKESIEVFEKMLSHAVRPDSIAFLEVLSACSHG 478
+ S+ EPD W +++GA H + F K++ P++I + ++S
Sbjct: 415 EFIESMPVEPDGAVWGALLGACKIHKNVDMAELAFAKVIE--FEPNNIGYYVLMSNIYSD 472
Query: 479 GLVSEGLRYFNLMISD 494
EG+ +M+ +
Sbjct: 473 SKNQEGIWRIRVMMRE 488
Score = 136 bits (342), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 91/325 (28%), Positives = 158/325 (48%), Gaps = 6/325 (1%)
Query: 231 WNVMVSCYALNCLGDGAIAVFNLMRLEGMKGDYFTFSSLVNSCGTLGSSKLGRQIHGLVI 290
WNV + A L +I+++ M G D F+F ++ SC +L G+Q+H V
Sbjct: 21 WNVRLRELAYQSLFSESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCHVT 80
Query: 291 KQSFDLDVLVATSLVDMYAKNGNIDDACRVFD--GMTAKNVVSWNTMVVGFGQNGDGREA 348
K + + V T+L+ MY K G + DA +VF+ +++ V +N ++ G+ N +A
Sbjct: 81 KGGCETEPFVLTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKVTDA 140
Query: 349 VKLLRDMLQGSFCPDEVTLASILSSCGSLSISCETRQVHAYAIKNGVQAFLSIENALINA 408
+ R M + D VT+ ++ C R +H +K G+ + +++ N+ I
Sbjct: 141 AYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVLNSFITM 200
Query: 409 YSKCGSIAGALQCFGSVKEPDLVTWTSIIGAYAFHGLSKESIEVFEKMLSHAVRPDSIAF 468
Y KCGS+ + F + L+TW ++I Y+ +GL+ + +E++E+M S V PD
Sbjct: 201 YMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVCPDPFTL 260
Query: 469 LEVLSACSHGGLVSEGLRYFNLMISDYHILPDSEHYTCLTDLLGRVGLLVEAYDLLASMP 528
+ VLS+C+H G G L+ S+ +P+ + R G L +A + MP
Sbjct: 261 VSVLSSCAHLGAKKIGHEVGKLVESN-GFVPNVFVSNASISMYARCGNLAKARAVFDIMP 319
Query: 529 IEPRSDTLGAFIGACKVH--GSIGL 551
++ + A IG +H G IGL
Sbjct: 320 VKSLV-SWTAMIGCYGMHGMGEIGL 343
>sp|Q9LT48|PP244_ARATH Pentatricopeptide repeat-containing protein At3g20730
OS=Arabidopsis thaliana GN=PCMP-E94 PE=2 SV=1
Length = 565
Score = 337 bits (864), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 185/551 (33%), Positives = 315/551 (57%), Gaps = 7/551 (1%)
Query: 64 SFYSQALKVSAKFGFLQQGKQLHSHIMKLGLCNKLSLQNQVLHVYVKCKAFDDMEKLFDE 123
S Y +ALK+ + +Q +H + + G C+ L L++ ++ +Y+K KLFD
Sbjct: 14 SLYLKALKLCSYQNVKKQLLLIHGNSITNGFCSNLQLKDMLIDLYLKQGDVKHARKLFDR 73
Query: 124 MRVRNIVTWNTLISGIINCG--GNVTPYFRRMLLDNVRLDHITFNSLLRACVQADDIEVG 181
+ R++V+W +IS CG + F+ M ++V+ + T+ S+L++C ++ G
Sbjct: 74 ISKRDVVSWTAMISRFSRCGYHPDALLLFKEMHREDVKANQFTYGSVLKSCKDLGCLKEG 133
Query: 182 RRLHSFILKVGFGLNCFVSSALVDLYGKCGFVEDARRVFDEVLCRDLVLWNVMVSCYALN 241
++H + K N V SAL+ LY +CG +E+AR FD + RDLV WN M+ Y N
Sbjct: 134 MQIHGSVEKGNCAGNLIVRSALLSLYARCGKMEEARLQFDSMKERDLVSWNAMIDGYTAN 193
Query: 242 CLGDGAIAVFNLMRLEGMKGDYFTFSSLVNSCGTLGSSKLGRQIHGLVIKQSFDLDVLVA 301
D + ++F LM EG K D FTF SL+ + + ++ ++HGL IK F +
Sbjct: 194 ACADTSFSLFQLMLTEGKKPDCFTFGSLLRASIVVKCLEIVSELHGLAIKLGFGRSSALI 253
Query: 302 TSLVDMYAKNGNIDDACRVFDGMTAKNVVSWNTMVVGFG-QNGDGREAVKLLRDMLQGSF 360
SLV+ Y K G++ +A ++ +G ++++S ++ GF QN +A + +DM++
Sbjct: 254 RSLVNAYVKCGSLANAWKLHEGTKKRDLLSCTALITGFSQQNNCTSDAFDIFKDMIRMKT 313
Query: 361 CPDEVTLASILSSCGSLSISCETRQVHAYAIKNGVQAF-LSIENALINAYSKCGSIAGAL 419
DEV ++S+L C +++ RQ+H +A+K+ F +++ N+LI+ Y+K G I A+
Sbjct: 314 KMDEVVVSSMLKICTTIASVTIGRQIHGFALKSSQIRFDVALGNSLIDMYAKSGEIEDAV 373
Query: 420 QCFGSVKEPDLVTWTSIIGAYAFHGLSKESIEVFEKMLSHAVRPDSIAFLEVLSACSHGG 479
F +KE D+ +WTS+I Y HG +++I+++ +M ++P+ + FL +LSACSH G
Sbjct: 374 LAFEEMKEKDVRSWTSLIAGYGRHGNFEKAIDLYNRMEHERIKPNDVTFLSLLSACSHTG 433
Query: 480 LVSEGLRYFNLMISDYHILPDSEHYTCLTDLLGRVGLLVEAYDLLASMP--IEPRSDTLG 537
G + ++ MI+ + I EH +C+ D+L R G L EAY L+ S + S T G
Sbjct: 434 QTELGWKIYDTMINKHGIEAREEHLSCIIDMLARSGYLEEAYALIRSKEGIVSLSSSTWG 493
Query: 538 AFIGACKVHGSIGLAKWAAEKLLELEPSKPVNYALVSNVYASERCWFDVARLRKMMRDNC 597
AF+ AC+ HG++ L+K AA +LL +EP KPVNY +++VYA+ W + RK+M+++
Sbjct: 494 AFLDACRRHGNVQLSKVAATQLLSMEPRKPVNYINLASVYAANGAWDNALNTRKLMKESG 553
Query: 598 D-HKVPGCSWI 607
+K PG S +
Sbjct: 554 SCNKAPGYSLV 564
>sp|O04659|PP398_ARATH Pentatricopeptide repeat-containing protein At5g27110
OS=Arabidopsis thaliana GN=PCMP-E14 PE=2 SV=2
Length = 691
Score = 337 bits (863), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 188/579 (32%), Positives = 309/579 (53%), Gaps = 3/579 (0%)
Query: 66 YSQALKVSAKFGFLQQGKQLHSHIMKLGLCNKLSLQNQVLHVYVKCKAFDDMEKLFDEMR 125
+ +K G G+ +H+ ++K G + + + ++ +Y K F++ ++FDEM
Sbjct: 110 FPNVIKAYGALGREFLGRMIHTLVVKSGYVCDVVVASSLVGMYAKFNLFENSLQVFDEMP 169
Query: 126 VRNIVTWNTLISGIINCGG--NVTPYFRRMLLDNVRLDHITFNSLLRACVQADDIEVGRR 183
R++ +WNT+IS G F RM + ++ + AC + +E G+
Sbjct: 170 ERDVASWNTVISCFYQSGEAEKALELFGRMESSGFEPNSVSLTVAISACSRLLWLERGKE 229
Query: 184 LHSFILKVGFGLNCFVSSALVDLYGKCGFVEDARRVFDEVLCRDLVLWNVMVSCYALNCL 243
+H +K GF L+ +V+SALVD+YGKC +E AR VF ++ + LV WN M+ Y
Sbjct: 230 IHRKCVKKGFELDEYVNSALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAKGD 289
Query: 244 GDGAIAVFNLMRLEGMKGDYFTFSSLVNSCGTLGSSKLGRQIHGLVIKQSFDLDVLVATS 303
+ + N M +EG + T +S++ +C + G+ IHG VI+ + D+ V S
Sbjct: 290 SKSCVEILNRMIIEGTRPSQTTLTSILMACSRSRNLLHGKFIHGYVIRSVVNADIYVNCS 349
Query: 304 LVDMYAKNGNIDDACRVFDGMTAKNVVSWNTMVVGFGQNGDGREAVKLLRDMLQGSFCPD 363
L+D+Y K G + A VF SWN M+ + G+ +AV++ M+ PD
Sbjct: 350 LIDLYFKCGEANLAETVFSKTQKDVAESWNVMISSYISVGNWFKAVEVYDQMVSVGVKPD 409
Query: 364 EVTLASILSSCGSLSISCETRQVHAYAIKNGVQAFLSIENALINAYSKCGSIAGALQCFG 423
VT S+L +C L+ + +Q+H ++ ++ + +AL++ YSKCG+ A + F
Sbjct: 410 VVTFTSVLPACSQLAALEKGKQIHLSISESRLETDELLLSALLDMYSKCGNEKEAFRIFN 469
Query: 424 SVKEPDLVTWTSIIGAYAFHGLSKESIEVFEKMLSHAVRPDSIAFLEVLSACSHGGLVSE 483
S+ + D+V+WT +I AY HG +E++ F++M ++PD + L VLSAC H GL+ E
Sbjct: 470 SIPKKDVVSWTVMISAYGSHGQPREALYQFDEMQKFGLKPDGVTLLAVLSACGHAGLIDE 529
Query: 484 GLRYFNLMISDYHILPDSEHYTCLTDLLGRVGLLVEAYDLLASMP-IEPRSDTLGAFIGA 542
GL++F+ M S Y I P EHY+C+ D+LGR G L+EAY+++ P ++ L A
Sbjct: 530 GLKFFSQMRSKYGIEPIIEHYSCMIDILGRAGRLLEAYEIIQQTPETSDNAELLSTLFSA 589
Query: 543 CKVHGSIGLAKWAAEKLLELEPSKPVNYALVSNVYASERCWFDVARLRKMMRDNCDHKVP 602
C +H L A L+E P Y ++ N+YAS W R+R M++ K P
Sbjct: 590 CCLHLEHSLGDRIARLLVENYPDDASTYMVLFNLYASGESWDAARRVRLKMKEMGLRKKP 649
Query: 603 GCSWIEIAGEIHTFVSSDRSHPQAVHMYAMLCTVFGLME 641
GCSWIE++ ++ F + DRSH +A ++Y L + G ME
Sbjct: 650 GCSWIEMSDKVCHFFAEDRSHLRAENVYECLALLSGHME 688
Score = 219 bits (557), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 132/454 (29%), Positives = 242/454 (53%), Gaps = 5/454 (1%)
Query: 79 LQQGKQLHSHIMKLGLCNKLSLQNQVLHVYVKCKAFDDMEKLFDEMRVR-NIVTWNTLIS 137
L++ K +H I+ LGL + L +++VY CK +F+ +R ++ WN+L+S
Sbjct: 20 LRRIKLVHQRILTLGLRRDVVLCKSLINVYFTCKDHCSARHVFENFDIRSDVYIWNSLMS 79
Query: 138 GIINCG--GNVTPYFRRMLLDNVRL-DHITFNSLLRACVQADDIEVGRRLHSFILKVGFG 194
G + F+R+L ++ + D TF ++++A +GR +H+ ++K G+
Sbjct: 80 GYSKNSMFHDTLEVFKRLLNCSICVPDSFTFPNVIKAYGALGREFLGRMIHTLVVKSGYV 139
Query: 195 LNCFVSSALVDLYGKCGFVEDARRVFDEVLCRDLVLWNVMVSCYALNCLGDGAIAVFNLM 254
+ V+S+LV +Y K E++ +VFDE+ RD+ WN ++SC+ + + A+ +F M
Sbjct: 140 CDVVVASSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVISCFYQSGEAEKALELFGRM 199
Query: 255 RLEGMKGDYFTFSSLVNSCGTLGSSKLGRQIHGLVIKQSFDLDVLVATSLVDMYAKNGNI 314
G + + + + +++C L + G++IH +K+ F+LD V ++LVDMY K +
Sbjct: 200 ESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFELDEYVNSALVDMYGKCDCL 259
Query: 315 DDACRVFDGMTAKNVVSWNTMVVGFGQNGDGREAVKLLRDMLQGSFCPDEVTLASILSSC 374
+ A VF M K++V+WN+M+ G+ GD + V++L M+ P + TL SIL +C
Sbjct: 260 EVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEGTRPSQTTLTSILMAC 319
Query: 375 GSLSISCETRQVHAYAIKNGVQAFLSIENALINAYSKCGSIAGALQCFGSVKEPDLVTWT 434
+ +H Y I++ V A + + +LI+ Y KCG A F ++ +W
Sbjct: 320 SRSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGEANLAETVFSKTQKDVAESWN 379
Query: 435 SIIGAYAFHGLSKESIEVFEKMLSHAVRPDSIAFLEVLSACSHGGLVSEGLRYFNLMISD 494
+I +Y G +++EV+++M+S V+PD + F VL ACS + +G + +L IS+
Sbjct: 380 VMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPACSQLAALEKG-KQIHLSISE 438
Query: 495 YHILPDSEHYTCLTDLLGRVGLLVEAYDLLASMP 528
+ D + L D+ + G EA+ + S+P
Sbjct: 439 SRLETDELLLSALLDMYSKCGNEKEAFRIFNSIP 472
Score = 174 bits (442), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 101/314 (32%), Positives = 164/314 (52%), Gaps = 3/314 (0%)
Query: 167 SLLRACVQA-DDIEVGRRLHSFILKVGFGLNCFVSSALVDLYGKCGFVEDARRVFDEVLC 225
SLLR C + + + +H IL +G + + +L+++Y C AR VF+
Sbjct: 8 SLLRECTNSTKSLRRIKLVHQRILTLGLRRDVVLCKSLINVYFTCKDHCSARHVFENFDI 67
Query: 226 R-DLVLWNVMVSCYALNCLGDGAIAVFN-LMRLEGMKGDYFTFSSLVNSCGTLGSSKLGR 283
R D+ +WN ++S Y+ N + + VF L+ D FTF +++ + G LG LGR
Sbjct: 68 RSDVYIWNSLMSGYSKNSMFHDTLEVFKRLLNCSICVPDSFTFPNVIKAYGALGREFLGR 127
Query: 284 QIHGLVIKQSFDLDVLVATSLVDMYAKNGNIDDACRVFDGMTAKNVVSWNTMVVGFGQNG 343
IH LV+K + DV+VA+SLV MYAK +++ +VFD M ++V SWNT++ F Q+G
Sbjct: 128 MIHTLVVKSGYVCDVVVASSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVISCFYQSG 187
Query: 344 DGREAVKLLRDMLQGSFCPDEVTLASILSSCGSLSISCETRQVHAYAIKNGVQAFLSIEN 403
+ +A++L M F P+ V+L +S+C L +++H +K G + + +
Sbjct: 188 EAEKALELFGRMESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFELDEYVNS 247
Query: 404 ALINAYSKCGSIAGALQCFGSVKEPDLVTWTSIIGAYAFHGLSKESIEVFEKMLSHAVRP 463
AL++ Y KC + A + F + LV W S+I Y G SK +E+ +M+ RP
Sbjct: 248 ALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEGTRP 307
Query: 464 DSIAFLEVLSACSH 477
+L ACS
Sbjct: 308 SQTTLTSILMACSR 321
Score = 99.4 bits (246), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 117/225 (52%), Gaps = 2/225 (0%)
Query: 55 IHESTHSAHSFYSQALKVSAKFGFLQQGKQLHSHIMKLGLCNKLSLQNQVLHVYVKCKAF 114
I E T + + + L ++ L GK +H ++++ + + + ++ +Y KC
Sbjct: 301 IIEGTRPSQTTLTSILMACSRSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGEA 360
Query: 115 DDMEKLFDEMRVRNIVTWNTLISGIINCGG--NVTPYFRRMLLDNVRLDHITFNSLLRAC 172
+ E +F + + +WN +IS I+ G + +M+ V+ D +TF S+L AC
Sbjct: 361 NLAETVFSKTQKDVAESWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPAC 420
Query: 173 VQADDIEVGRRLHSFILKVGFGLNCFVSSALVDLYGKCGFVEDARRVFDEVLCRDLVLWN 232
Q +E G+++H I + + + SAL+D+Y KCG ++A R+F+ + +D+V W
Sbjct: 421 SQLAALEKGKQIHLSISESRLETDELLLSALLDMYSKCGNEKEAFRIFNSIPKKDVVSWT 480
Query: 233 VMVSCYALNCLGDGAIAVFNLMRLEGMKGDYFTFSSLVNSCGTLG 277
VM+S Y + A+ F+ M+ G+K D T +++++CG G
Sbjct: 481 VMISAYGSHGQPREALYQFDEMQKFGLKPDGVTLLAVLSACGHAG 525
>sp|Q9STS9|PP268_ARATH Putative pentatricopeptide repeat-containing protein At3g47840
OS=Arabidopsis thaliana GN=PCMP-E43 PE=3 SV=1
Length = 706
Score = 336 bits (862), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 190/572 (33%), Positives = 308/572 (53%), Gaps = 2/572 (0%)
Query: 64 SFYSQALKVSAKFGFLQQGKQLHSHIMKLGLCNKLSLQNQVLHVYVKCKAFDDMEKLFDE 123
S S LK + + G+ LH++ +K L + + + + +L +Y + D ++F E
Sbjct: 109 SVLSVVLKACGQSSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKSCRVFSE 168
Query: 124 MRVRNIVTWNTLISGIINCG--GNVTPYFRRMLLDNVRLDHITFNSLLRACVQADDIEVG 181
M RN VTW +I+G+++ G YF M D TF L+AC ++ G
Sbjct: 169 MPFRNAVTWTAIITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALKACAGLRQVKYG 228
Query: 182 RRLHSFILKVGFGLNCFVSSALVDLYGKCGFVEDARRVFDEVLCRDLVLWNVMVSCYALN 241
+ +H+ ++ GF V+++L +Y +CG ++D +F+ + RD+V W ++ Y
Sbjct: 229 KAIHTHVIVRGFVTTLCVANSLATMYTECGEMQDGLCLFENMSERDVVSWTSLIVAYKRI 288
Query: 242 CLGDGAIAVFNLMRLEGMKGDYFTFSSLVNSCGTLGSSKLGRQIHGLVIKQSFDLDVLVA 301
A+ F MR + + TF+S+ ++C +L G Q+H V+ + + V+
Sbjct: 289 GQEVKAVETFIKMRNSQVPPNEQTFASMFSACASLSRLVWGEQLHCNVLSLGLNDSLSVS 348
Query: 302 TSLVDMYAKNGNIDDACRVFDGMTAKNVVSWNTMVVGFGQNGDGREAVKLLRDMLQGSFC 361
S++ MY+ GN+ A +F GM ++++SW+T++ G+ Q G G E K M Q
Sbjct: 349 NSMMKMYSTCGNLVSASVLFQGMRCRDIISWSTIIGGYCQAGFGEEGFKYFSWMRQSGTK 408
Query: 362 PDEVTLASILSSCGSLSISCETRQVHAYAIKNGVQAFLSIENALINAYSKCGSIAGALQC 421
P + LAS+LS G++++ RQVHA A+ G++ ++ ++LIN YSKCGSI A
Sbjct: 409 PTDFALASLLSVSGNMAVIEGGRQVHALALCFGLEQNSTVRSSLINMYSKCGSIKEASMI 468
Query: 422 FGSVKEPDLVTWTSIIGAYAFHGLSKESIEVFEKMLSHAVRPDSIAFLEVLSACSHGGLV 481
FG D+V+ T++I YA HG SKE+I++FEK L RPDS+ F+ VL+AC+H G +
Sbjct: 469 FGETDRDDIVSLTAMINGYAEHGKSKEAIDLFEKSLKVGFRPDSVTFISVLTACTHSGQL 528
Query: 482 SEGLRYFNLMISDYHILPDSEHYTCLTDLLGRVGLLVEAYDLLASMPIEPRSDTLGAFIG 541
G YFN+M Y++ P EHY C+ DLL R G L +A ++ M + +
Sbjct: 529 DLGFHYFNMMQETYNMRPAKEHYGCMVDLLCRAGRLSDAEKMINEMSWKKDDVVWTTLLI 588
Query: 542 ACKVHGSIGLAKWAAEKLLELEPSKPVNYALVSNVYASERCWFDVARLRKMMRDNCDHKV 601
ACK G I + AAE++LEL+P+ ++N+Y+S + A +RK M+ K
Sbjct: 589 ACKAKGDIERGRRAAERILELDPTCATALVTLANIYSSTGNLEEAANVRKNMKAKGVIKE 648
Query: 602 PGCSWIEIAGEIHTFVSSDRSHPQAVHMYAML 633
PG S I+I + FVS DR HPQ+ +Y +L
Sbjct: 649 PGWSSIKIKDCVSAFVSGDRFHPQSEDIYNIL 680
Score = 180 bits (456), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 116/436 (26%), Positives = 210/436 (48%), Gaps = 10/436 (2%)
Query: 118 EKLFDEMRVRNIVTWNTLISGIINCGGNVTPYF----RRMLLDNVRLDHITFNSLLRACV 173
++FD+M +IV+W ++I + + R++ V D + +L+AC
Sbjct: 60 RQVFDKMPHGDIVSWTSIIKRYVTANNSDEALILFSAMRVVDHAVSPDTSVLSVVLKACG 119
Query: 174 QADDIEVGRRLHSFILKVGFGLNCFVSSALVDLYGKCGFVEDARRVFDEVLCRDLVLWNV 233
Q+ +I G LH++ +K + +V S+L+D+Y + G ++ + RVF E+ R+ V W
Sbjct: 120 QSSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKSCRVFSEMPFRNAVTWTA 179
Query: 234 MVSCYALNCLGDGAIAVFNLMRLEGMKGDYFTFSSLVNSCGTLGSSKLGRQIHGLVIKQS 293
+++ + F+ M D +TF+ + +C L K G+ IH VI +
Sbjct: 180 IITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALKACAGLRQVKYGKAIHTHVIVRG 239
Query: 294 FDLDVLVATSLVDMYAKNGNIDDACRVFDGMTAKNVVSWNTMVVGFGQNGDGREAVKLLR 353
F + VA SL MY + G + D +F+ M+ ++VVSW +++V + + G +AV+
Sbjct: 240 FVTTLCVANSLATMYTECGEMQDGLCLFENMSERDVVSWTSLIVAYKRIGQEVKAVETFI 299
Query: 354 DMLQGSFCPDEVTLASILSSCGSLSISCETRQVHAYAIKNGVQAFLSIENALINAYSKCG 413
M P+E T AS+ S+C SLS Q+H + G+ LS+ N+++ YS CG
Sbjct: 300 KMRNSQVPPNEQTFASMFSACASLSRLVWGEQLHCNVLSLGLNDSLSVSNSMMKMYSTCG 359
Query: 414 SIAGALQCFGSVKEPDLVTWTSIIGAYAFHGLSKESIEVFEKMLSHAVRPDSIAFLEVLS 473
++ A F ++ D+++W++IIG Y G +E + F M +P A +LS
Sbjct: 360 NLVSASVLFQGMRCRDIISWSTIIGGYCQAGFGEEGFKYFSWMRQSGTKPTDFALASLLS 419
Query: 474 ACSHGGLVSEGLRYFNLMISDYHILPDSEHYTCLTDLLGRVGLLVEAYDLLASMPIEPRS 533
+ ++ EG R + + + + +S + L ++ + G + EA + R
Sbjct: 420 VSGNMAVI-EGGRQVHALALCFGLEQNSTVRSSLINMYSKCGSIKEASMIFGET---DRD 475
Query: 534 D--TLGAFIGACKVHG 547
D +L A I HG
Sbjct: 476 DIVSLTAMINGYAEHG 491
Score = 146 bits (368), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 82/268 (30%), Positives = 133/268 (49%), Gaps = 2/268 (0%)
Query: 211 GFVEDARRVFDEVLCRDLVLWNVMVSCYALNCLGDGAIAVFNLMRL--EGMKGDYFTFSS 268
G + AR+VFD++ D+V W ++ Y D A+ +F+ MR+ + D S
Sbjct: 54 GNLRAARQVFDKMPHGDIVSWTSIIKRYVTANNSDEALILFSAMRVVDHAVSPDTSVLSV 113
Query: 269 LVNSCGTLGSSKLGRQIHGLVIKQSFDLDVLVATSLVDMYAKNGNIDDACRVFDGMTAKN 328
++ +CG + G +H +K S V V +SL+DMY + G ID +CRVF M +N
Sbjct: 114 VLKACGQSSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKSCRVFSEMPFRN 173
Query: 329 VVSWNTMVVGFGQNGDGREAVKLLRDMLQGSFCPDEVTLASILSSCGSLSISCETRQVHA 388
V+W ++ G G +E + +M + D T A L +C L + +H
Sbjct: 174 AVTWTAIITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALKACAGLRQVKYGKAIHT 233
Query: 389 YAIKNGVQAFLSIENALINAYSKCGSIAGALQCFGSVKEPDLVTWTSIIGAYAFHGLSKE 448
+ I G L + N+L Y++CG + L F ++ E D+V+WTS+I AY G +
Sbjct: 234 HVIVRGFVTTLCVANSLATMYTECGEMQDGLCLFENMSERDVVSWTSLIVAYKRIGQEVK 293
Query: 449 SIEVFEKMLSHAVRPDSIAFLEVLSACS 476
++E F KM + V P+ F + SAC+
Sbjct: 294 AVETFIKMRNSQVPPNEQTFASMFSACA 321
Score = 52.8 bits (125), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 79/173 (45%), Gaps = 14/173 (8%)
Query: 367 LASILSSCGSLSISCET------RQVHAYAIKNGVQAFLSIE-NALINAYSKCGSIAGAL 419
+ S + +CG++ C T + V ++ Q + + N+ + + G++ A
Sbjct: 1 MISSVRNCGTIQRFCTTSISLLQKPVEENIVRISNQVMVKFDPNSHLRSLINAGNLRAAR 60
Query: 420 QCFGSVKEPDLVTWTSIIGAYAFHGLSKESIEVFEKM--LSHAVRPDSIAFLEVLSACSH 477
Q F + D+V+WTSII Y S E++ +F M + HAV PD+ VL AC
Sbjct: 61 QVFDKMPHGDIVSWTSIIKRYVTANNSDEALILFSAMRVVDHAVSPDTSVLSVVLKACGQ 120
Query: 478 GGLVS--EGLRYFNLMISDYHILPDSEHYTCLTDLLGRVGLLVEAYDLLASMP 528
++ E L + + S +L + L D+ RVG + ++ + + MP
Sbjct: 121 SSNIAYGESLHAYAVKTS---LLSSVYVGSSLLDMYKRVGKIDKSCRVFSEMP 170
>sp|Q9SX45|PPR75_ARATH Pentatricopeptide repeat-containing protein At1g50270
OS=Arabidopsis thaliana GN=PCMP-E42 PE=2 SV=1
Length = 596
Score = 335 bits (860), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 182/529 (34%), Positives = 296/529 (55%), Gaps = 7/529 (1%)
Query: 114 FDDMEKLFDEMRVRNIVTWNTLI---SGIINCGGNVTPY-FRRMLLDNVRLDHITFNSLL 169
F +L +++ +I W++LI SG I ++ +R M + V TF LL
Sbjct: 52 FRYARRLLCQLQTLSIQLWDSLIGHFSGGITLNRRLSFLAYRHMRRNGVIPSRHTFPPLL 111
Query: 170 RACVQADDIEVGRRLHSFILKVGFGLNCFVSSALVDLYGKCGFVEDARRVFDEVLCRDLV 229
+A + D + H+ I+K G + FV ++L+ Y G + A R+FD +D+V
Sbjct: 112 KAVFKLRDSN-PFQFHAHIVKFGLDSDPFVRNSLISGYSSSGLFDFASRLFDGAEDKDVV 170
Query: 230 LWNVMVSCYALNCLGDGAIAVFNLMRLEGMKGDYFTFSSLVNSCGTLGSSKLGRQIHGLV 289
W M+ + N A+ F M+ G+ + T S++ + G + + GR +HGL
Sbjct: 171 TWTAMIDGFVRNGSASEAMVYFVEMKKTGVAANEMTVVSVLKAAGKVEDVRFGRSVHGLY 230
Query: 290 IKQS-FDLDVLVATSLVDMYAKNGNIDDACRVFDGMTAKNVVSWNTMVVGFGQNGDGREA 348
++ DV + +SLVDMY K DDA +VFD M ++NVV+W ++ G+ Q+ +
Sbjct: 231 LETGRVKCDVFIGSSLVDMYGKCSCYDDAQKVFDEMPSRNVVTWTALIAGYVQSRCFDKG 290
Query: 349 VKLLRDMLQGSFCPDEVTLASILSSCGSLSISCETRQVHAYAIKNGVQAFLSIENALINA 408
+ + +ML+ P+E TL+S+LS+C + R+VH Y IKN ++ + LI+
Sbjct: 291 MLVFEEMLKSDVAPNEKTLSSVLSACAHVGALHRGRRVHCYMIKNSIEINTTAGTTLIDL 350
Query: 409 YSKCGSIAGALQCFGSVKEPDLVTWTSIIGAYAFHGLSKESIEVFEKMLSHAVRPDSIAF 468
Y KCG + A+ F + E ++ TWT++I +A HG ++++ ++F MLS V P+ + F
Sbjct: 351 YVKCGCLEEAILVFERLHEKNVYTWTAMINGFAAHGYARDAFDLFYTMLSSHVSPNEVTF 410
Query: 469 LEVLSACSHGGLVSEGLRYFNLMISDYHILPDSEHYTCLTDLLGRVGLLVEAYDLLASMP 528
+ VLSAC+HGGLV EG R F M +++ P ++HY C+ DL GR GLL EA L+ MP
Sbjct: 411 MAVLSACAHGGLVEEGRRLFLSMKGRFNMEPKADHYACMVDLFGRKGLLEEAKALIERMP 470
Query: 529 IEPRSDTLGAFIGACKVHGSIGLAKWAAEKLLELEPSKPVNYALVSNVYASERCWFDVAR 588
+EP + GA G+C +H L K+AA ++++L+PS Y L++N+Y+ + W +VAR
Sbjct: 471 MEPTNVVWGALFGSCLLHKDYELGKYAASRVIKLQPSHSGRYTLLANLYSESQNWDEVAR 530
Query: 589 LRKMMRDNCDHKVPGCSWIEIAGEIHTFVSSDRSHP-QAVHMYAMLCTV 636
+RK M+D K PG SWIE+ G++ F++ D P ++ +Y L TV
Sbjct: 531 VRKQMKDQQVVKSPGFSWIEVKGKLCEFIAFDDKKPLESDDLYKTLDTV 579
Score = 193 bits (491), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 120/413 (29%), Positives = 200/413 (48%), Gaps = 35/413 (8%)
Query: 48 QLRNSGTIHESTHSAHSFYSQALKVSAKFGFLQQGKQLHSHIMKLGLCNKLSLQNQVLHV 107
+R +G I S H+ K+ F Q H+HI+K GL + ++N ++
Sbjct: 94 HMRRNGVI-PSRHTFPPLLKAVFKLRDSNPF-----QFHAHIVKFGLDSDPFVRNSLISG 147
Query: 108 YVKCKAFDDMEKLFDEMRVRNIVTWNTLISGIINCG--GNVTPYFRRMLLDNVRLDHITF 165
Y FD +LFD +++VTW +I G + G YF M V + +T
Sbjct: 148 YSSSGLFDFASRLFDGAEDKDVVTWTAMIDGFVRNGSASEAMVYFVEMKKTGVAANEMTV 207
Query: 166 NSLLRACVQADDIEVGRRLHSFILKVG-FGLNCFVSSALVDLYGKCGFVEDARRVFDEVL 224
S+L+A + +D+ GR +H L+ G + F+ S+LVD+YGKC +DA++VFDE+
Sbjct: 208 VSVLKAAGKVEDVRFGRSVHGLYLETGRVKCDVFIGSSLVDMYGKCSCYDDAQKVFDEMP 267
Query: 225 CRDLVLWNVMVSCYALNCLGDGAIAVFNLMRLEGMKGDYFTFSSLVNSCGTLGSSKLGRQ 284
R++V W +++ Y + D + VF M + + T SS++++C +G+ GR+
Sbjct: 268 SRNVVTWTALIAGYVQSRCFDKGMLVFEEMLKSDVAPNEKTLSSVLSACAHVGALHRGRR 327
Query: 285 IHGLVIKQSFDLDVLVATSLVDMYAKNGNIDDACRVFDGMTAKNVVSWNTMVVGFGQNGD 344
+H +IK S +++ T+L+D+Y K G +++A VF+ + KNV +W M+ GF +G
Sbjct: 328 VHCYMIKNSIEINTTAGTTLIDLYVKCGCLEEAILVFERLHEKNVYTWTAMINGFAAHGY 387
Query: 345 GREAVKLLRDMLQGSFCPDEVTLASILSSCGSLSISCETRQVHAYAIKNGVQAFLSIENA 404
R+A L ML P+EVT ++LS+C H ++ G + FLS++
Sbjct: 388 ARDAFDLFYTMLSSHVSPNEVTFMAVLSACA-----------HGGLVEEGRRLFLSMKGR 436
Query: 405 LINAYSKCGSIAGALQCFGS--------------VKEPDLVTWTSIIGAYAFH 443
N K A + FG EP V W ++ G+ H
Sbjct: 437 F-NMEPKADHYACMVDLFGRKGLLEEAKALIERMPMEPTNVVWGALFGSCLLH 488
>sp|Q9LN01|PPR21_ARATH Pentatricopeptide repeat-containing protein At1g08070
OS=Arabidopsis thaliana GN=PCMP-H12 PE=2 SV=1
Length = 741
Score = 335 bits (858), Expect = 8e-91, Method: Compositional matrix adjust.
Identities = 191/618 (30%), Positives = 334/618 (54%), Gaps = 38/618 (6%)
Query: 79 LQQGKQLHSHIMKLGLCNKLSLQNQVLHVYVKCKAFDDME---KLFDEMRVRNIVTWNTL 135
LQ + +H+ ++K+GL N ++++ + F+ + +F ++ N++ WNT+
Sbjct: 46 LQSLRIIHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQEPNLLIWNTM 105
Query: 136 ISGIINCGGNVTPYFRRMLLDNVRL--DHITFNSLLRACVQADDIEVGRRLHSFILKVGF 193
G V+ + + ++ L + TF +L++C ++ + G+++H +LK+G
Sbjct: 106 FRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGC 165
Query: 194 GLNCFVSSALVDLY-------------------------------GKCGFVEDARRVFDE 222
L+ +V ++L+ +Y G++E+A+++FDE
Sbjct: 166 DLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQKLFDE 225
Query: 223 VLCRDLVLWNVMVSCYALNCLGDGAIAVFNLMRLEGMKGDYFTFSSLVNSCGTLGSSKLG 282
+ +D+V WN M+S YA A+ +F M ++ D T ++V++C GS +LG
Sbjct: 226 IPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELG 285
Query: 283 RQIHGLVIKQSFDLDVLVATSLVDMYAKNGNIDDACRVFDGMTAKNVVSWNTMVVGFGQN 342
RQ+H + F ++ + +L+D+Y+K G ++ AC +F+ + K+V+SWNT++ G+
Sbjct: 286 RQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTLIGGYTHM 345
Query: 343 GDGREAVKLLRDMLQGSFCPDEVTLASILSSCGSLSISCETRQVHAYAIK--NGVQAFLS 400
+EA+ L ++ML+ P++VT+ SIL +C L R +H Y K GV S
Sbjct: 346 NLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASS 405
Query: 401 IENALINAYSKCGSIAGALQCFGSVKEPDLVTWTSIIGAYAFHGLSKESIEVFEKMLSHA 460
+ +LI+ Y+KCG I A Q F S+ L +W ++I +A HG + S ++F +M
Sbjct: 406 LRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIG 465
Query: 461 VRPDSIAFLEVLSACSHGGLVSEGLRYFNLMISDYHILPDSEHYTCLTDLLGRVGLLVEA 520
++PD I F+ +LSACSH G++ G F M DY + P EHY C+ DLLG GL EA
Sbjct: 466 IQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLGHSGLFKEA 525
Query: 521 YDLLASMPIEPRSDTLGAFIGACKVHGSIGLAKWAAEKLLELEPSKPVNYALVSNVYASE 580
+++ M +EP + + ACK+HG++ L + AE L+++EP P +Y L+SN+YAS
Sbjct: 526 EEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPENPGSYVLLSNIYASA 585
Query: 581 RCWFDVARLRKMMRDNCDHKVPGCSWIEIAGEIHTFVSSDRSHPQAVHMYAMLCTVFGLM 640
W +VA+ R ++ D KVPGCS IEI +H F+ D+ HP+ +Y ML + L+
Sbjct: 586 GRWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLL 645
Query: 641 EENNVSGHCNVLDKEMDE 658
E+ + + +EM+E
Sbjct: 646 EKAGFVPDTSEVLQEMEE 663
Score = 182 bits (463), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 126/431 (29%), Positives = 216/431 (50%), Gaps = 49/431 (11%)
Query: 156 DNVRLDHITFNSLLRACVQADDIEVGRRLHSFILKVGFGLNCFVSSALVDLYGKCGFVED 215
D++R +H + SLL C + R +H+ ++K+G + S L++ E
Sbjct: 29 DSIR-NHPSL-SLLHNCKTLQSL---RIIHAQMIKIGLHNTNYALSKLIEFCILSPHFEG 83
Query: 216 ---ARRVFDEVLCRDLVLWNVMVSCYALNCLGDGAIAVFNLMRLEGMKGDYFTFSSLVNS 272
A VF + +L++WN M +AL+ A+ ++ M G+ + +TF ++ S
Sbjct: 84 LPYAISVFKTIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKS 143
Query: 273 CGTLGSSKLGRQIHGLVIKQSFDLDVLVATSLVDMYAKNGNIDDACRVFDG--------- 323
C + K G+QIHG V+K DLD+ V TSL+ MY +NG ++DA +VFD
Sbjct: 144 CAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSY 203
Query: 324 ----------------------MTAKNVVSWNTMVVGFGQNGDGREAVKLLRDMLQGSFC 361
+ K+VVSWN M+ G+ + G+ +EA++L +DM++ +
Sbjct: 204 TALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVR 263
Query: 362 PDEVTLASILSSC---GSLSISCETRQVHAYAIKNGVQAFLSIENALINAYSKCGSIAGA 418
PDE T+ +++S+C GS+ + RQVH + +G + L I NALI+ YSKCG + A
Sbjct: 264 PDESTMVTVVSACAQSGSIELG---RQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETA 320
Query: 419 LQCFGSVKEPDLVTWTSIIGAYAFHGLSKESIEVFEKMLSHAVRPDSIAFLEVLSACSHG 478
F + D+++W ++IG Y L KE++ +F++ML P+ + L +L AC+H
Sbjct: 321 CGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHL 380
Query: 479 GLVSEGLRYFNLMISDY--HILPDSEHYTCLTDLLGRVGLLVEAYDLLASMPIEPRSDTL 536
G + G R+ ++ I + S T L D+ + G + A+ + S+ + +
Sbjct: 381 GAIDIG-RWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSI-LHKSLSSW 438
Query: 537 GAFIGACKVHG 547
A I +HG
Sbjct: 439 NAMIFGFAMHG 449
Score = 181 bits (460), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 109/340 (32%), Positives = 178/340 (52%), Gaps = 35/340 (10%)
Query: 70 LKVSAKFGFLQQGKQLHSHIMKLGLCNKLSLQNQVLHVYVKC-------KAFD------- 115
LK AK ++G+Q+H H++KLG L + ++ +YV+ K FD
Sbjct: 141 LKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDV 200
Query: 116 -----------------DMEKLFDEMRVRNIVTWNTLISGIINCGG--NVTPYFRRMLLD 156
+ +KLFDE+ V+++V+WN +ISG G F+ M+
Sbjct: 201 VSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKT 260
Query: 157 NVRLDHITFNSLLRACVQADDIEVGRRLHSFILKVGFGLNCFVSSALVDLYGKCGFVEDA 216
NVR D T +++ AC Q+ IE+GR++H +I GFG N + +AL+DLY KCG +E A
Sbjct: 261 NVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETA 320
Query: 217 RRVFDEVLCRDLVLWNVMVSCYALNCLGDGAIAVFNLMRLEGMKGDYFTFSSLVNSCGTL 276
+F+ + +D++ WN ++ Y L A+ +F M G + T S++ +C L
Sbjct: 321 CGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHL 380
Query: 277 GSSKLGRQIHGLVIKQSFDLDVL--VATSLVDMYAKNGNIDDACRVFDGMTAKNVVSWNT 334
G+ +GR IH + K+ + + TSL+DMYAK G+I+ A +VF+ + K++ SWN
Sbjct: 381 GAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNA 440
Query: 335 MVVGFGQNGDGREAVKLLRDMLQGSFCPDEVTLASILSSC 374
M+ GF +G + L M + PD++T +LS+C
Sbjct: 441 MIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSAC 480
Score = 119 bits (298), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 68/216 (31%), Positives = 117/216 (54%), Gaps = 4/216 (1%)
Query: 74 AKFGFLQQGKQLHSHIMKLGLCNKLSLQNQVLHVYVKCKAFDDMEKLFDEMRVRNIVTWN 133
A+ G ++ G+Q+H I G + L + N ++ +Y KC + LF+ + +++++WN
Sbjct: 277 AQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWN 336
Query: 134 TLISGI--INCGGNVTPYFRRMLLDNVRLDHITFNSLLRACVQADDIEVGRRLHSFILKV 191
TLI G +N F+ ML + +T S+L AC I++GR +H +I K
Sbjct: 337 TLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKR 396
Query: 192 GFGLNCFVS--SALVDLYGKCGFVEDARRVFDEVLCRDLVLWNVMVSCYALNCLGDGAIA 249
G+ S ++L+D+Y KCG +E A +VF+ +L + L WN M+ +A++ D +
Sbjct: 397 LKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFD 456
Query: 250 VFNLMRLEGMKGDYFTFSSLVNSCGTLGSSKLGRQI 285
+F+ MR G++ D TF L+++C G LGR I
Sbjct: 457 LFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHI 492
>sp|Q9LIC3|PP227_ARATH Putative pentatricopeptide repeat-containing protein At3g13770,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H85 PE=3
SV=1
Length = 628
Score = 333 bits (855), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 164/472 (34%), Positives = 285/472 (60%), Gaps = 4/472 (0%)
Query: 165 FNSLLRACVQADDIEVGRRLHSFILKVGFGLNCFVSSALVDLYGKCGFVEDARRVFDEVL 224
+++LL AC+ + G+R+H+ ++K + ++ + L+ YGKC +EDAR+V DE+
Sbjct: 55 YDALLNACLDKRALRDGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMP 114
Query: 225 CRDLVLWNVMVSCYALNCLGDGAIAVF-NLMRLEGMKGDYFTFSSLVNSCGTLGSSKLGR 283
+++V W M+S Y+ A+ VF +MR +G K + FTF++++ SC LG+
Sbjct: 115 EKNVVSWTAMISRYSQTGHSSEALTVFAEMMRSDG-KPNEFTFATVLTSCIRASGLGLGK 173
Query: 284 QIHGLVIKQSFDLDVLVATSLVDMYAKNGNIDDACRVFDGMTAKNVVSWNTMVVGFGQNG 343
QIHGL++K ++D + V +SL+DMYAK G I +A +F+ + ++VVS ++ G+ Q G
Sbjct: 174 QIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQLG 233
Query: 344 DGREAVKLLRDMLQGSFCPDEVTLASILSSCGSLSISCETRQVHAYAIKNGVQAFLSIEN 403
EA+++ + P+ VT AS+L++ L++ +Q H + ++ + + ++N
Sbjct: 234 LDEEALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQN 293
Query: 404 ALINAYSKCGSIAGALQCFGSVKEPDLVTWTSIIGAYAFHGLSKESIEVFEKMLSHA-VR 462
+LI+ YSKCG+++ A + F ++ E ++W +++ Y+ HGL +E +E+F M V+
Sbjct: 294 SLIDMYSKCGNLSYARRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVK 353
Query: 463 PDSIAFLEVLSACSHGGLVSEGLRYFNLMIS-DYHILPDSEHYTCLTDLLGRVGLLVEAY 521
PD++ L VLS CSHG + GL F+ M++ +Y P +EHY C+ D+LGR G + EA+
Sbjct: 354 PDAVTLLAVLSGCSHGRMEDTGLNIFDGMVAGEYGTKPGTEHYGCIVDMLGRAGRIDEAF 413
Query: 522 DLLASMPIEPRSDTLGAFIGACKVHGSIGLAKWAAEKLLELEPSKPVNYALVSNVYASER 581
+ + MP +P + LG+ +GAC+VH S+ + + +L+E+EP NY ++SN+YAS
Sbjct: 414 EFIKRMPSKPTAGVLGSLLGACRVHLSVDIGESVGRRLIEIEPENAGNYVILSNLYASAG 473
Query: 582 CWFDVARLRKMMRDNCDHKVPGCSWIEIAGEIHTFVSSDRSHPQAVHMYAML 633
W DV +R MM K PG SWI+ +H F ++DR+HP+ + A +
Sbjct: 474 RWADVNNVRAMMMQKAVTKEPGRSWIQHEQTLHYFHANDRTHPRREEVLAKM 525
Score = 129 bits (323), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 79/279 (28%), Positives = 145/279 (51%), Gaps = 9/279 (3%)
Query: 254 MRLEGMKGDYFTFSSLVNSCGTLGSSKLGRQIHGLVIKQSFDLDVLVATSLVDMYAKNGN 313
M + G + + + +L+N+C + + G+++H +IK + + T L+ Y K
Sbjct: 43 MAMLGPEMGFHGYDALLNACLDKRALRDGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDC 102
Query: 314 IDDACRVFDGMTAKNVVSWNTMVVGFGQNGDGREAVKLLRDMLQGSFCPDEVTLASILSS 373
++DA +V D M KNVVSW M+ + Q G EA+ + +M++ P+E T A++L+S
Sbjct: 103 LEDARKVLDEMPEKNVVSWTAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTS 162
Query: 374 CGSLSISCETRQVHAYAIKNGVQAFLSIENALINAYSKCGSIAGALQCFGSVKEPDLVTW 433
C S +Q+H +K + + + ++L++ Y+K G I A + F + E D+V+
Sbjct: 163 CIRASGLGLGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSC 222
Query: 434 TSIIGAYAFHGLSKESIEVFEKMLSHAVRPDSIAFLEVLSACSHGGLVSEGLR----YFN 489
T+II YA GL +E++E+F ++ S + P+ + + +L+A S L+ G +
Sbjct: 223 TAIIAGYAQLGLDEEALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLR 282
Query: 490 LMISDYHILPDSEHYTCLTDLLGRVGLLVEAYDLLASMP 528
+ Y +L +S L D+ + G L A L +MP
Sbjct: 283 RELPFYAVLQNS-----LIDMYSKCGNLSYARRLFDNMP 316
Score = 61.6 bits (148), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 92/217 (42%), Gaps = 8/217 (3%)
Query: 66 YSQALKVSAKFGFLQQGKQLHSHIMKLGLCNKLSLQNQVLHVYVKCKAFDDMEKLFDEMR 125
Y+ L + L GKQ H H+++ L LQN ++ +Y KC +LFD M
Sbjct: 257 YASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQNSLIDMYSKCGNLSYARRLFDNMP 316
Query: 126 VRNIVTWNTLISGIIN--CGGNVTPYFRRMLLDN-VRLDHITFNSLLRACVQADDIEVGR 182
R ++WN ++ G G V FR M + V+ D +T ++L C + G
Sbjct: 317 ERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPDAVTLLAVLSGCSHGRMEDTGL 376
Query: 183 RLHSFILKVGFGLNCFVS--SALVDLYGKCGFVEDARRVFDEVLCRDL--VLWNVMVSCY 238
+ ++ +G +VD+ G+ G +++A + + VL +++ +C
Sbjct: 377 NIFDGMVAGEYGTKPGTEHYGCIVDMLGRAGRIDEAFEFIKRMPSKPTAGVLGSLLGACR 436
Query: 239 ALNCLGDGAIAVFNLMRLEGMK-GDYFTFSSLVNSCG 274
+ G L+ +E G+Y S+L S G
Sbjct: 437 VHLSVDIGESVGRRLIEIEPENAGNYVILSNLYASAG 473
>sp|Q9LJR6|PP253_ARATH Putative pentatricopeptide repeat-containing protein At3g25060,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E96 PE=3
SV=1
Length = 601
Score = 333 bits (855), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 191/570 (33%), Positives = 305/570 (53%), Gaps = 13/570 (2%)
Query: 75 KFGFLQQGKQLHSHIMKL--------GLCNKLSLQNQVLHVYVKCKAFDDMEKLFDEMRV 126
+ FLQ +L HI ++ L N S+ ++ + K+FDE+
Sbjct: 19 RIKFLQSISKLKRHITQIHAFVISTGNLLNGSSISRDLIASCGRIGEISYARKVFDELPQ 78
Query: 127 RNIVTWNTLISGIINCGGN---VTPYFRRMLLDNVRLDHITFNSLLRACVQADDIEVGRR 183
R + +N++I + + G N V + +M+ + ++ D TF ++AC+ +E G
Sbjct: 79 RGVSVYNSMIV-VYSRGKNPDEVLRLYDQMIAEKIQPDSSTFTMTIKACLSGLVLEKGEA 137
Query: 184 LHSFILKVGFGLNCFVSSALVDLYGKCGFVEDARRVFDEVLCRDLVLWNVMVSCYALNCL 243
+ + G+ + FV S++++LY KCG +++A +F ++ RD++ W MV+ +A
Sbjct: 138 VWCKAVDFGYKNDVFVCSSVLNLYMKCGKMDEAEVLFGKMAKRDVICWTTMVTGFAQAGK 197
Query: 244 GDGAIAVFNLMRLEGMKGDYFTFSSLVNSCGTLGSSKLGRQIHGLVIKQSFDLDVLVATS 303
A+ + M+ EG D L+ + G LG +K+GR +HG + + ++V+V TS
Sbjct: 198 SLKAVEFYREMQNEGFGRDRVVMLGLLQASGDLGDTKMGRSVHGYLYRTGLPMNVVVETS 257
Query: 304 LVDMYAKNGNIDDACRVFDGMTAKNVVSWNTMVVGFGQNGDGREAVKLLRDMLQGSFCPD 363
LVDMYAK G I+ A RVF M K VSW +++ GF QNG +A + + +M F PD
Sbjct: 258 LVDMYAKVGFIEVASRVFSRMMFKTAVSWGSLISGFAQNGLANKAFEAVVEMQSLGFQPD 317
Query: 364 EVTLASILSSCGSLSISCETRQVHAYAIKNGVQAFLSIENALINAYSKCGSIAGALQCFG 423
VTL +L +C + R VH Y +K V ++ AL++ YSKCG+++ + + F
Sbjct: 318 LVTLVGVLVACSQVGSLKTGRLVHCYILKRHVLDRVT-ATALMDMYSKCGALSSSREIFE 376
Query: 424 SVKEPDLVTWTSIIGAYAFHGLSKESIEVFEKMLSHAVRPDSIAFLEVLSACSHGGLVSE 483
V DLV W ++I Y HG +E + +F KM + PD F +LSA SH GLV +
Sbjct: 377 HVGRKDLVCWNTMISCYGIHGNGQEVVSLFLKMTESNIEPDHATFASLLSALSHSGLVEQ 436
Query: 484 GLRYFNLMISDYHILPDSEHYTCLTDLLGRVGLLVEAYDLLASMPIEPRSDTLGAFIGAC 543
G +F++MI+ Y I P +HY CL DLL R G + EA D++ S ++ A + C
Sbjct: 437 GQHWFSVMINKYKIQPSEKHYVCLIDLLARAGRVEEALDMINSEKLDNALPIWVALLSGC 496
Query: 544 KVHGSIGLAKWAAEKLLELEPSKPVNYALVSNVYASERCWFDVARLRKMMRDNCDHKVPG 603
H ++ + AA K+L+L P LVSN +A+ W +VA++RK+MR+ KVPG
Sbjct: 497 INHRNLSVGDIAANKILQLNPDSIGIQTLVSNFFATANKWKEVAKVRKLMRNGAMEKVPG 556
Query: 604 CSWIEIAGEIHTFVSSDRSHPQAVHMYAML 633
S IE+ GE+ TF+ D SH + HM +L
Sbjct: 557 YSAIEVNGELRTFLMEDLSHHEHYHMLQVL 586
Score = 185 bits (470), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 120/428 (28%), Positives = 218/428 (50%), Gaps = 17/428 (3%)
Query: 55 IHESTHSAHSFYSQALKVSAKFGFLQQGKQLHSHIMKLGLCNKLSLQNQVLHVYVKCKAF 114
I E S ++ +K L++G+ + + G N + + + VL++Y+KC
Sbjct: 108 IAEKIQPDSSTFTMTIKACLSGLVLEKGEAVWCKAVDFGYKNDVFVCSSVLNLYMKCGKM 167
Query: 115 DDMEKLFDEMRVRNIVTWNTLISGIINCGGNV--TPYFRRMLLDNVRLDHITFNSLLRAC 172
D+ E LF +M R+++ W T+++G G ++ ++R M + D + LL+A
Sbjct: 168 DEAEVLFGKMAKRDVICWTTMVTGFAQAGKSLKAVEFYREMQNEGFGRDRVVMLGLLQAS 227
Query: 173 VQADDIEVGRRLHSFILKVGFGLNCFVSSALVDLYGKCGFVEDARRVFDEVLCRDLVLWN 232
D ++GR +H ++ + G +N V ++LVD+Y K GF+E A RVF ++ + V W
Sbjct: 228 GDLGDTKMGRSVHGYLYRTGLPMNVVVETSLVDMYAKVGFIEVASRVFSRMMFKTAVSWG 287
Query: 233 VMVSCYALNCLGDGAIAVFNLMRLEGMKGDYFTFSSLVNSCGTLGSSKLGRQIHGLVIKQ 292
++S +A N L + A M+ G + D T ++ +C +GS K GR +H ++K+
Sbjct: 288 SLISGFAQNGLANKAFEAVVEMQSLGFQPDLVTLVGVLVACSQVGSLKTGRLVHCYILKR 347
Query: 293 SFDLDVLVATSLVDMYAKNGNIDDACRVFDGMTAKNVVSWNTMVVGFGQNGDGREAVKLL 352
LD + AT+L+DMY+K G + + +F+ + K++V WNTM+ +G +G+G+E V L
Sbjct: 348 HV-LDRVTATALMDMYSKCGALSSSREIFEHVGRKDLVCWNTMISCYGIHGNGQEVVSLF 406
Query: 353 RDMLQGSFCPDEVTLASILSSCGSLSISCETRQ-----VHAYAIKNGVQAFLSIENALIN 407
M + + PD T AS+LS+ + + + ++ Y I+ + ++ LI+
Sbjct: 407 LKMTESNIEPDHATFASLLSALSHSGLVEQGQHWFSVMINKYKIQPSEKHYV----CLID 462
Query: 408 AYSKCGSIAGALQCFGSVK-EPDLVTWTSII-GAYAFHGLSKESIEVFEKMLSHAVRPDS 465
++ G + AL S K + L W +++ G LS I K+L + PDS
Sbjct: 463 LLARAGRVEEALDMINSEKLDNALPIWVALLSGCINHRNLSVGDIAA-NKILQ--LNPDS 519
Query: 466 IAFLEVLS 473
I ++S
Sbjct: 520 IGIQTLVS 527
>sp|Q9FRI5|PPR57_ARATH Pentatricopeptide repeat-containing protein At1g25360
OS=Arabidopsis thaliana GN=PCMP-H74 PE=2 SV=1
Length = 790
Score = 333 bits (854), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 209/658 (31%), Positives = 319/658 (48%), Gaps = 104/658 (15%)
Query: 79 LQQGKQLHSHIMKLGLCNKLSLQNQVLHVYVKCKAFDDMEKLFDEMR------------- 125
LQ + +H +I+ G + + N+++ VY K + +LFDE+
Sbjct: 30 LQLARAVHGNIITFGFQPRAHILNRLIDVYCKSSELNYARQLFDEISEPDKIARTTMVSG 89
Query: 126 --------------------VRNIVTWNTLISGII--NCGGNVTPYFRRMLLDNVRLDHI 163
+R+ V +N +I+G N G + F +M + + D+
Sbjct: 90 YCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEGFKPDNF 149
Query: 164 TFNSLLRA-CVQADDIEVGRRLHSFILKVGFGLNCFVSSALVDLYGKCG----FVEDARR 218
TF S+L + ADD + + H+ LK G G VS+ALV +Y KC + AR+
Sbjct: 150 TFASVLAGLALVADDEKQCVQFHAAALKSGAGYITSVSNALVSVYSKCASSPSLLHSARK 209
Query: 219 VFDEVLCRD--------------------------------LVLWNVMVSCYALNCLGDG 246
VFDE+L +D LV +N M+S Y
Sbjct: 210 VFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMISGYVNRGFYQE 269
Query: 247 AIAVFNLMRLEGMKGDYFTFSSLVNSCGTLGSSKLGRQIHGLVIKQSFDLDVLVATSLVD 306
A+ + M G++ D FT+ S++ +C T G +LG+Q+H V+++ D SLV
Sbjct: 270 ALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRRE-DFSFHFDNSLVS 328
Query: 307 MYAKNGNIDDACRVFDGMTAKNVVSWNT-------------------------------M 335
+Y K G D+A +F+ M AK++VSWN M
Sbjct: 329 LYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIM 388
Query: 336 VVGFGQNGDGREAVKLLRDMLQGSFCPDEVTLASILSSCGSLSISCETRQVHAYAIKNGV 395
+ G +NG G E +KL M + F P + + + SC L C +Q HA +K G
Sbjct: 389 ISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQLLKIGF 448
Query: 396 QAFLSIENALINAYSKCGSIAGALQCFGSVKEPDLVTWTSIIGAYAFHGLSKESIEVFEK 455
+ LS NALI Y+KCG + A Q F ++ D V+W ++I A HG E+++V+E+
Sbjct: 449 DSSLSAGNALITMYAKCGVVEEARQVFRTMPCLDSVSWNALIAALGQHGHGAEAVDVYEE 508
Query: 456 MLSHAVRPDSIAFLEVLSACSHGGLVSEGLRYFNLMISDYHILPDSEHYTCLTDLLGRVG 515
ML +RPD I L VL+ACSH GLV +G +YF+ M + Y I P ++HY L DLL R G
Sbjct: 509 MLKKGIRPDRITLLTVLTACSHAGLVDQGRKYFDSMETVYRIPPGADHYARLIDLLCRSG 568
Query: 516 LLVEAYDLLASMPIEPRSDTLGAFIGACKVHGSIGLAKWAAEKLLELEPSKPVNYALVSN 575
+A ++ S+P +P ++ A + C+VHG++ L AA+KL L P Y L+SN
Sbjct: 569 KFSDAESVIESLPFKPTAEIWEALLSGCRVHGNMELGIIAADKLFGLIPEHDGTYMLLSN 628
Query: 576 VYASERCWFDVARLRKMMRDNCDHKVPGCSWIEIAGEIHTFVSSDRSHPQAVHMYAML 633
++A+ W +VAR+RK+MRD K CSWIE+ ++HTF+ D SHP+A +Y L
Sbjct: 629 MHAATGQWEEVARVRKLMRDRGVKKEVACSWIEMETQVHTFLVDDTSHPEAEAVYIYL 686
Score = 124 bits (312), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 101/408 (24%), Positives = 183/408 (44%), Gaps = 77/408 (18%)
Query: 156 DNVRLDHITFNSLLRACV--QADDIEVGRRLHSFILKVGFGLNCFVSSALVDLYGKCGFV 213
D VR + + LR C+ + +++ R +H I+ GF + + L+D+Y K +
Sbjct: 6 DLVRAIANRYAANLRLCLPLRRTSLQLARAVHGNIITFGFQPRAHILNRLIDVYCKSSEL 65
Query: 214 EDARRVFDEV--------------------------------LC-RDLVLWNVMVSCYAL 240
AR++FDE+ +C RD V++N M++ ++
Sbjct: 66 NYARQLFDEISEPDKIARTTMVSGYCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSH 125
Query: 241 NCLGDGAIAVFNLMRLEGMKGDYFTFSSLVNSCGTLG-SSKLGRQIHGLVIKQSFDLDVL 299
N G AI +F M+ EG K D FTF+S++ + K Q H +K
Sbjct: 126 NNDGYSAINLFCKMKHEGFKPDNFTFASVLAGLALVADDEKQCVQFHAAALKSGAGYITS 185
Query: 300 VATSLVDMYAKNGN----IDDACRVFDGMTAKNVVSWNTMVVGFGQNG---------DG- 345
V+ +LV +Y+K + + A +VFD + K+ SW TM+ G+ +NG +G
Sbjct: 186 VSNALVSVYSKCASSPSLLHSARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGM 245
Query: 346 ----------------------REAVKLLRDMLQGSFCPDEVTLASILSSCGSLSISCET 383
+EA++++R M+ DE T S++ +C + +
Sbjct: 246 DDNMKLVAYNAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLG 305
Query: 384 RQVHAYAIKNGVQAFLSIENALINAYSKCGSIAGALQCFGSVKEPDLVTWTSIIGAYAFH 443
+QVHAY ++ +F +N+L++ Y KCG A F + DLV+W +++ Y
Sbjct: 306 KQVHAYVLRREDFSF-HFDNSLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSS 364
Query: 444 GLSKESIEVFEKMLSHAVRPDSIAFLEVLSACSHGGLVSEGLRYFNLM 491
G E+ +F++M + ++++ ++S + G EGL+ F+ M
Sbjct: 365 GHIGEAKLIFKEMKEKNI----LSWMIMISGLAENGFGEEGLKLFSCM 408
Score = 114 bits (286), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 76/308 (24%), Positives = 141/308 (45%), Gaps = 36/308 (11%)
Query: 66 YSQALKVSAKFGFLQQGKQLHSHIMKLGLCNKLSLQNQVLHVYVKCKAFDDMEKLFDEMR 125
Y ++ A G LQ GKQ+H+++++ + N ++ +Y KC FD+ +F++M
Sbjct: 289 YPSVIRACATAGLLQLGKQVHAYVLRREDFS-FHFDNSLVSLYYKCGKFDEARAIFEKMP 347
Query: 126 VRNIVTWNTLISGIINCG--GNVTPYFRRMLLDNVRLDHITFNSL-----------LRAC 172
+++V+WN L+SG ++ G G F+ M N+ I + L L +C
Sbjct: 348 AKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSC 407
Query: 173 VQADDIEV--------------------GRRLHSFILKVGFGLNCFVSSALVDLYGKCGF 212
++ + E G++ H+ +LK+GF + +AL+ +Y KCG
Sbjct: 408 MKREGFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQLLKIGFDSSLSAGNALITMYAKCGV 467
Query: 213 VEDARRVFDEVLCRDLVLWNVMVSCYALNCLGDGAIAVFNLMRLEGMKGDYFTFSSLVNS 272
VE+AR+VF + C D V WN +++ + G A+ V+ M +G++ D T +++ +
Sbjct: 468 VEEARQVFRTMPCLDSVSWNALIAALGQHGHGAEAVDVYEEMLKKGIRPDRITLLTVLTA 527
Query: 273 CGTLGSSKLGRQ-IHGLVIKQSFDLDVLVATSLVDMYAKNGNIDDACRVFDGMTAKNVVS 331
C G GR+ + L+D+ ++G DA V + + K
Sbjct: 528 CSHAGLVDQGRKYFDSMETVYRIPPGADHYARLIDLLCRSGKFSDAESVIESLPFKPTAE 587
Query: 332 -WNTMVVG 338
W ++ G
Sbjct: 588 IWEALLSG 595
Score = 95.5 bits (236), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 86/357 (24%), Positives = 142/357 (39%), Gaps = 79/357 (22%)
Query: 278 SSKLGRQIHGLVIKQSFDLDVLVATSLVDMYAKNGNIDDACRVFDGMTA----------- 326
S +L R +HG +I F + L+D+Y K+ ++ A ++FD ++
Sbjct: 29 SLQLARAVHGNIITFGFQPRAHILNRLIDVYCKSSELNYARQLFDEISEPDKIARTTMVS 88
Query: 327 ----------------------KNVVSWNTMVVGFGQNGDGREAVKLLRDMLQGSFCPDE 364
++ V +N M+ GF N DG A+ L M F PD
Sbjct: 89 GYCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEGFKPDN 148
Query: 365 VTLASILSSCGSLSISCETR--QVHAYAIKNGVQAFLSIENALINAYSKCGS----IAGA 418
T AS+L+ +L E + Q HA A+K+G S+ NAL++ YSKC S + A
Sbjct: 149 FTFASVLAGL-ALVADDEKQCVQFHAAALKSGAGYITSVSNALVSVYSKCASSPSLLHSA 207
Query: 419 LQCFGSVKEPDLVTWTS--------------------------------IIGAYAFHGLS 446
+ F + E D +WT+ +I Y G
Sbjct: 208 RKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMISGYVNRGFY 267
Query: 447 KESIEVFEKMLSHAVRPDSIAFLEVLSACSHGGLVSEG--LRYFNLMISDYHILPDSEHY 504
+E++E+ +M+S + D + V+ AC+ GL+ G + + L D+ D+
Sbjct: 268 QEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRREDFSFHFDNS-- 325
Query: 505 TCLTDLLGRVGLLVEAYDLLASMPIEPRSDTLGAFIGACKVHGSIGLAKWAAEKLLE 561
L L + G EA + MP + + A + G IG AK +++ E
Sbjct: 326 --LVSLYYKCGKFDEARAIFEKMPAKDLV-SWNALLSGYVSSGHIGEAKLIFKEMKE 379
Score = 72.4 bits (176), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 100/217 (46%), Gaps = 10/217 (4%)
Query: 66 YSQALKVSAKFGFLQQGKQLHSHIMKLGLCNKLSLQNQVLHVYVKCKAFDDMEKLFDEMR 125
+S A+K A G G+Q H+ ++K+G + LS N ++ +Y KC ++ ++F M
Sbjct: 420 FSGAIKSCAVLGAYCNGQQYHAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMP 479
Query: 126 VRNIVTWNTLIS--GIINCGGNVTPYFRRMLLDNVRLDHITFNSLLRACVQADDIEVGRR 183
+ V+WN LI+ G G + ML +R D IT ++L AC A ++ GR+
Sbjct: 480 CLDSVSWNALIAALGQHGHGAEAVDVYEEMLKKGIRPDRITLLTVLTACSHAGLVDQGRK 539
Query: 184 LH---SFILKVGFGLNCFVSSALVDLYGKCGFVEDARRVFDEVLCRDLV-LWNVMVS-CY 238
+ ++ G + + + L+DL + G DA V + + + +W ++S C
Sbjct: 540 YFDSMETVYRIPPGADHY--ARLIDLLCRSGKFSDAESVIESLPFKPTAEIWEALLSGCR 597
Query: 239 ALNCLGDGAIAVFNLMRL-EGMKGDYFTFSSLVNSCG 274
+ G IA L L G Y S++ + G
Sbjct: 598 VHGNMELGIIAADKLFGLIPEHDGTYMLLSNMHAATG 634
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.324 0.137 0.421
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 239,456,099
Number of Sequences: 539616
Number of extensions: 9725928
Number of successful extensions: 35286
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 353
Number of HSP's successfully gapped in prelim test: 87
Number of HSP's that attempted gapping in prelim test: 26997
Number of HSP's gapped (non-prelim): 2172
length of query: 665
length of database: 191,569,459
effective HSP length: 124
effective length of query: 541
effective length of database: 124,657,075
effective search space: 67439477575
effective search space used: 67439477575
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.5 bits)
S2: 65 (29.6 bits)