Query 044635
Match_columns 831
No_of_seqs 600 out of 3708
Neff 7.7
Searched_HMMs 46136
Date Fri Mar 29 05:14:10 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/044635.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/044635hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02205 alpha,alpha-trehalose 100.0 3E-188 6E-193 1675.3 89.7 828 1-828 1-851 (854)
2 PLN03064 alpha,alpha-trehalose 100.0 2E-157 3E-162 1399.1 83.4 739 59-827 93-932 (934)
3 PLN03063 alpha,alpha-trehalose 100.0 7E-150 1E-154 1346.5 84.2 741 57-828 8-790 (797)
4 PRK14501 putative bifunctional 100.0 1E-140 2E-145 1271.0 83.9 712 60-823 1-725 (726)
5 KOG1050 Trehalose-6-phosphate 100.0 6E-130 1E-134 1136.3 61.7 720 59-819 2-731 (732)
6 PRK10117 trehalose-6-phosphate 100.0 9E-117 2E-121 985.3 49.4 446 60-531 2-456 (474)
7 TIGR02398 gluc_glyc_Psyn gluco 100.0 3E-115 6E-120 984.7 50.5 455 65-528 1-482 (487)
8 PF00982 Glyco_transf_20: Glyc 100.0 6E-116 1E-120 993.1 36.4 459 61-528 2-474 (474)
9 COG0380 OtsA Trehalose-6-phosp 100.0 2E-111 5E-116 935.1 46.6 459 55-529 10-480 (486)
10 TIGR02400 trehalose_OtsA alpha 100.0 1E-103 3E-108 896.6 50.8 446 61-527 1-455 (456)
11 cd03788 GT1_TPS Trehalose-6-Ph 100.0 2.8E-94 6E-99 825.9 51.7 451 61-526 1-459 (460)
12 COG1877 OtsB Trehalose-6-phosp 100.0 7.6E-35 1.6E-39 304.0 23.8 248 560-825 5-255 (266)
13 PF02358 Trehalose_PPase: Treh 100.0 2E-35 4.3E-40 310.4 16.5 227 577-812 1-235 (235)
14 TIGR02468 sucrsPsyn_pln sucros 100.0 8.8E-32 1.9E-36 322.6 43.8 536 203-776 312-993 (1050)
15 PLN03017 trehalose-phosphatase 100.0 3.3E-33 7.1E-38 302.8 27.5 242 567-825 105-362 (366)
16 PLN02151 trehalose-phosphatase 100.0 3.6E-33 7.9E-38 301.7 27.4 240 569-824 94-347 (354)
17 TIGR00685 T6PP trehalose-phosp 100.0 3.2E-33 6.8E-38 295.2 26.3 237 571-822 1-243 (244)
18 PRK10187 trehalose-6-phosphate 100.0 4.6E-33 1E-37 296.8 27.6 234 572-826 13-248 (266)
19 PLN02580 trehalose-phosphatase 100.0 4.7E-33 1E-37 304.4 27.6 241 566-825 112-380 (384)
20 COG0561 Cof Predicted hydrolas 99.9 3.2E-26 7E-31 244.9 23.9 225 572-823 2-262 (264)
21 PRK15126 thiamin pyrimidine py 99.9 4.9E-26 1.1E-30 244.6 23.6 224 573-823 2-263 (272)
22 PRK10976 putative hydrolase; P 99.9 7.6E-26 1.6E-30 242.3 23.3 223 573-822 2-264 (266)
23 PRK10513 sugar phosphate phosp 99.9 1.8E-25 3.8E-30 240.0 25.5 224 572-822 2-268 (270)
24 PLN02887 hydrolase family prot 99.9 2.3E-24 5E-29 249.6 25.6 230 565-822 301-579 (580)
25 PRK03669 mannosyl-3-phosphogly 99.9 1.4E-24 3.1E-29 233.0 22.2 222 572-824 6-270 (271)
26 PRK01158 phosphoglycolate phos 99.9 2.1E-24 4.6E-29 225.9 22.9 213 572-822 2-229 (230)
27 PF08282 Hydrolase_3: haloacid 99.9 3.5E-24 7.6E-29 225.8 22.4 217 576-818 1-254 (254)
28 TIGR01484 HAD-SF-IIB HAD-super 99.9 1.1E-24 2.4E-29 223.8 17.8 192 575-780 1-201 (204)
29 PRK10530 pyridoxal phosphate ( 99.9 2.9E-23 6.4E-28 222.8 23.5 221 572-822 2-271 (272)
30 TIGR00099 Cof-subfamily Cof su 99.9 5.8E-23 1.2E-27 218.8 21.1 217 575-818 1-256 (256)
31 TIGR01482 SPP-subfamily Sucros 99.9 5.7E-23 1.2E-27 214.3 19.4 211 576-821 1-224 (225)
32 TIGR01485 SPP_plant-cyano sucr 99.9 4.4E-23 9.6E-28 218.7 18.2 221 574-821 2-246 (249)
33 TIGR01487 SPP-like sucrose-pho 99.9 1.2E-22 2.7E-27 210.5 19.9 208 573-818 1-215 (215)
34 TIGR01486 HAD-SF-IIB-MPGP mann 99.9 3.3E-22 7.1E-27 213.0 21.5 219 575-821 1-255 (256)
35 PTZ00174 phosphomannomutase; P 99.9 2E-21 4.3E-26 205.7 21.7 198 571-779 3-225 (247)
36 TIGR02471 sucr_syn_bact_C sucr 99.9 1.4E-21 3E-26 205.6 20.2 214 575-821 1-234 (236)
37 PRK00192 mannosyl-3-phosphogly 99.9 3.5E-21 7.7E-26 207.0 21.9 225 572-822 3-270 (273)
38 cd03792 GT1_Trehalose_phosphor 99.9 8.1E-21 1.8E-25 213.2 24.1 299 177-528 63-371 (372)
39 TIGR02463 MPGP_rel mannosyl-3- 99.9 3.3E-21 7.1E-26 200.7 17.3 196 575-780 1-217 (221)
40 PRK15484 lipopolysaccharide 1, 99.9 1.4E-19 3.1E-24 203.9 30.2 267 202-528 100-377 (380)
41 PLN02382 probable sucrose-phos 99.9 5.2E-21 1.1E-25 215.6 18.2 230 569-823 5-261 (413)
42 PLN02423 phosphomannomutase 99.9 7.6E-20 1.6E-24 193.0 23.0 211 572-822 6-244 (245)
43 PLN02939 transferase, transfer 99.8 5.6E-19 1.2E-23 209.8 32.0 316 180-530 590-968 (977)
44 PLN02316 synthase/transferase 99.8 2.7E-19 5.9E-24 216.3 28.7 307 178-529 687-1034(1036)
45 PRK00654 glgA glycogen synthas 99.8 3.2E-19 6.9E-24 206.3 28.2 292 202-529 119-463 (466)
46 PRK14098 glycogen synthase; Pr 99.8 5.9E-19 1.3E-23 204.4 28.0 317 178-529 119-486 (489)
47 TIGR03449 mycothiol_MshA UDP-N 99.8 2.4E-18 5.3E-23 195.2 30.6 285 202-529 102-402 (405)
48 PRK14502 bifunctional mannosyl 99.8 3.5E-19 7.7E-24 205.2 22.4 199 571-783 414-656 (694)
49 TIGR02095 glgA glycogen/starch 99.8 1.4E-18 3E-23 201.6 27.7 309 182-527 110-471 (473)
50 PRK14099 glycogen synthase; Pr 99.8 1.2E-18 2.6E-23 201.7 26.4 290 203-530 135-480 (485)
51 TIGR02472 sucr_P_syn_N sucrose 99.8 1.5E-18 3.2E-23 199.4 25.8 313 180-525 94-437 (439)
52 cd03818 GT1_ExpC_like This fam 99.8 2.7E-18 5.8E-23 194.6 25.5 297 183-523 71-395 (396)
53 PRK15427 colanic acid biosynth 99.8 1.4E-17 3E-22 189.2 27.4 270 202-527 119-404 (406)
54 TIGR02461 osmo_MPG_phos mannos 99.8 1.9E-18 4.1E-23 180.1 18.5 186 575-779 1-220 (225)
55 PRK12702 mannosyl-3-phosphogly 99.8 3E-18 6.5E-23 179.7 19.9 189 573-780 1-248 (302)
56 PF05116 S6PP: Sucrose-6F-phos 99.8 1.2E-19 2.5E-24 191.8 8.7 198 573-801 2-210 (247)
57 TIGR02149 glgA_Coryne glycogen 99.8 3.2E-17 6.9E-22 184.6 28.9 282 202-528 84-386 (388)
58 PLN02871 UDP-sulfoquinovose:DA 99.8 2E-17 4.2E-22 191.5 27.3 281 196-533 141-439 (465)
59 cd03796 GT1_PIG-A_like This fa 99.8 2.5E-17 5.4E-22 186.8 27.7 271 203-530 90-369 (398)
60 cd03791 GT1_Glycogen_synthase_ 99.8 2.9E-17 6.2E-22 190.7 26.4 308 181-525 110-473 (476)
61 cd03800 GT1_Sucrose_synthase T 99.8 8.4E-17 1.8E-21 181.1 28.4 279 203-523 103-397 (398)
62 cd04951 GT1_WbdM_like This fam 99.8 8.2E-17 1.8E-21 178.3 26.7 278 194-526 74-358 (360)
63 PRK10307 putative glycosyl tra 99.8 2.4E-16 5.2E-21 179.6 29.2 280 202-529 107-408 (412)
64 TIGR03088 stp2 sugar transfera 99.8 1.5E-16 3.3E-21 178.4 26.8 205 300-528 160-372 (374)
65 TIGR02470 sucr_synth sucrose s 99.7 5.8E-16 1.3E-20 183.8 31.1 336 178-526 362-745 (784)
66 cd05844 GT1_like_7 Glycosyltra 99.7 3.4E-16 7.4E-21 174.5 25.9 270 194-523 77-365 (367)
67 PLN00142 sucrose synthase 99.7 5.5E-16 1.2E-20 183.9 28.1 331 177-526 384-768 (815)
68 cd03819 GT1_WavL_like This fam 99.7 4.4E-16 9.4E-21 172.5 25.6 266 196-513 75-349 (355)
69 cd04962 GT1_like_5 This family 99.7 1.4E-15 3E-20 169.8 29.4 283 187-527 73-369 (371)
70 cd03794 GT1_wbuB_like This fam 99.7 1.8E-15 4E-20 167.4 29.4 270 202-522 100-393 (394)
71 cd03812 GT1_CapH_like This fam 99.7 6.9E-16 1.5E-20 171.1 25.0 258 196-505 77-342 (358)
72 cd03806 GT1_ALG11_like This fa 99.7 7.1E-16 1.5E-20 176.0 25.5 268 199-516 107-414 (419)
73 cd03813 GT1_like_3 This family 99.7 6.9E-16 1.5E-20 179.0 23.7 272 200-524 172-472 (475)
74 cd03801 GT1_YqgM_like This fam 99.7 2.7E-15 5.9E-20 164.0 26.0 280 195-526 81-373 (374)
75 PRK15179 Vi polysaccharide bio 99.7 1.2E-15 2.7E-20 181.2 24.9 272 203-524 402-689 (694)
76 cd03809 GT1_mtfB_like This fam 99.7 7.1E-16 1.5E-20 170.4 20.6 267 203-523 87-364 (365)
77 cd03817 GT1_UGDG_like This fam 99.7 2.7E-15 5.9E-20 165.5 24.8 265 195-514 80-362 (374)
78 cd03799 GT1_amsK_like This is 99.7 4.9E-15 1.1E-19 163.8 26.9 259 203-520 81-353 (355)
79 cd03805 GT1_ALG2_like This fam 99.7 6.8E-15 1.5E-19 165.9 27.1 275 202-521 95-391 (392)
80 cd03822 GT1_ecORF704_like This 99.7 3.8E-15 8.2E-20 164.7 23.9 274 203-526 78-365 (366)
81 cd03821 GT1_Bme6_like This fam 99.7 6E-15 1.3E-19 162.6 25.4 273 202-523 88-374 (375)
82 PLN02949 transferase, transfer 99.7 1.4E-14 3.1E-19 166.4 28.5 309 152-529 109-457 (463)
83 PRK15490 Vi polysaccharide bio 99.7 6.2E-15 1.3E-19 168.0 24.8 288 195-527 276-574 (578)
84 cd03798 GT1_wlbH_like This fam 99.7 8E-15 1.7E-19 161.0 25.1 274 202-527 94-375 (377)
85 cd03807 GT1_WbnK_like This fam 99.7 1.1E-14 2.4E-19 159.8 25.9 278 197-525 78-363 (365)
86 cd03793 GT1_Glycogen_synthase_ 99.7 3.7E-15 8E-20 169.8 21.8 357 154-527 105-585 (590)
87 TIGR02918 accessory Sec system 99.7 1.5E-14 3.2E-19 167.8 27.3 266 201-526 211-497 (500)
88 cd03814 GT1_like_2 This family 99.7 1.5E-14 3.2E-19 159.6 25.6 272 196-526 80-363 (364)
89 cd04946 GT1_AmsK_like This fam 99.7 2.4E-14 5.1E-19 163.0 27.7 268 199-523 125-406 (407)
90 cd03823 GT1_ExpE7_like This fa 99.7 7.5E-14 1.6E-18 153.5 29.6 257 193-523 90-354 (359)
91 cd04949 GT1_gtfA_like This fam 99.7 8E-15 1.7E-19 164.3 22.2 277 182-520 82-370 (372)
92 cd03820 GT1_amsD_like This fam 99.6 3E-14 6.4E-19 155.1 21.9 255 203-523 85-347 (348)
93 PRK09922 UDP-D-galactose:(gluc 99.6 5.3E-14 1.1E-18 157.4 21.6 236 193-496 78-326 (359)
94 PHA01633 putative glycosyl tra 99.6 2E-14 4.3E-19 157.2 17.7 188 305-523 118-334 (335)
95 PLN02846 digalactosyldiacylgly 99.6 3.6E-14 7.8E-19 161.1 19.5 182 305-527 201-390 (462)
96 cd03816 GT1_ALG1_like This fam 99.6 1.4E-13 3E-18 157.1 23.6 263 202-512 96-401 (415)
97 cd03808 GT1_cap1E_like This fa 99.6 1.6E-13 3.4E-18 150.1 22.9 272 196-523 77-358 (359)
98 PLN02501 digalactosyldiacylgly 99.6 8.4E-14 1.8E-18 160.2 18.1 314 138-526 379-707 (794)
99 PRK10125 putative glycosyl tra 99.6 1.9E-13 4.2E-18 155.1 21.0 182 300-526 212-402 (405)
100 cd03811 GT1_WabH_like This fam 99.5 3.3E-13 7.2E-18 146.9 20.8 237 203-493 83-328 (353)
101 cd03795 GT1_like_4 This family 99.5 5.3E-13 1.1E-17 147.7 22.7 255 202-512 84-349 (357)
102 PHA01630 putative group 1 glyc 99.5 9.3E-13 2E-17 145.3 22.2 207 257-527 94-329 (331)
103 cd04955 GT1_like_6 This family 99.5 1.6E-12 3.5E-17 144.2 23.9 264 203-525 86-361 (363)
104 TIGR03087 stp1 sugar transfera 99.5 2E-12 4.2E-17 146.8 24.6 186 300-526 196-394 (397)
105 COG0297 GlgA Glycogen synthase 99.5 1.7E-12 3.8E-17 147.6 23.6 294 202-528 131-477 (487)
106 COG3769 Predicted hydrolase (H 99.5 5.3E-13 1.1E-17 131.6 15.8 200 572-779 6-230 (274)
107 cd03804 GT1_wbaZ_like This fam 99.5 2.2E-12 4.7E-17 143.5 22.6 241 202-521 84-349 (351)
108 cd03825 GT1_wcfI_like This fam 99.5 4.2E-12 9.2E-17 140.9 23.3 192 300-527 159-363 (365)
109 cd03802 GT1_AviGT4_like This f 99.5 7.6E-12 1.6E-16 137.4 23.2 236 202-524 88-332 (335)
110 PLN02275 transferase, transfer 99.5 8.9E-12 1.9E-16 140.2 23.9 232 203-492 102-371 (371)
111 PRK05749 3-deoxy-D-manno-octul 99.4 1.6E-11 3.5E-16 140.6 25.5 272 190-513 115-406 (425)
112 PF00534 Glycos_transf_1: Glyc 99.4 1.9E-12 4.1E-17 128.7 12.7 147 329-495 4-159 (172)
113 cd04950 GT1_like_1 Glycosyltra 99.3 3.2E-10 7E-15 127.6 20.9 263 198-528 99-371 (373)
114 PLN02605 monogalactosyldiacylg 99.2 1.3E-09 2.8E-14 123.2 24.7 188 301-523 174-376 (382)
115 KOG1111 N-acetylglucosaminyltr 99.2 5.9E-11 1.3E-15 125.5 11.8 185 275-493 145-334 (426)
116 PF03332 PMM: Eukaryotic phosp 99.0 5.9E-09 1.3E-13 105.2 15.0 193 598-822 1-219 (220)
117 KOG3189 Phosphomannomutase [Li 99.0 6.5E-09 1.4E-13 101.3 13.2 199 567-776 5-228 (252)
118 cd03786 GT1_UDP-GlcNAc_2-Epime 98.9 8.9E-08 1.9E-12 107.0 22.3 253 185-496 75-339 (363)
119 TIGR00236 wecB UDP-N-acetylglu 98.9 9.1E-08 2E-12 107.4 21.9 251 188-495 76-335 (365)
120 PRK13609 diacylglycerol glucos 98.9 2.1E-07 4.5E-12 105.0 24.9 273 183-529 88-372 (380)
121 PRK00726 murG undecaprenyldiph 98.9 5.5E-08 1.2E-12 108.6 19.7 252 193-526 85-355 (357)
122 TIGR01670 YrbI-phosphatas 3-de 98.9 7.2E-09 1.6E-13 101.6 10.1 70 739-825 76-152 (154)
123 PRK09484 3-deoxy-D-manno-octul 98.9 6.9E-09 1.5E-13 104.8 9.7 124 571-809 19-153 (183)
124 cd03785 GT1_MurG MurG is an N- 98.9 2E-07 4.3E-12 103.6 21.7 242 193-515 83-344 (350)
125 PRK13608 diacylglycerol glucos 98.8 4.8E-07 1E-11 102.6 23.1 173 329-532 191-375 (391)
126 TIGR01133 murG undecaprenyldip 98.8 2.2E-07 4.8E-12 103.1 18.5 176 303-520 153-346 (348)
127 cd01635 Glycosyltransferase_GT 98.7 2.8E-07 6.1E-12 94.3 16.6 107 344-470 109-220 (229)
128 COG0438 RfaG Glycosyltransfera 98.7 5.6E-07 1.2E-11 96.9 19.2 193 301-527 173-375 (381)
129 cd01427 HAD_like Haloacid deha 98.7 4.5E-08 9.6E-13 92.3 8.7 56 575-631 1-61 (139)
130 PRK11133 serB phosphoserine ph 98.7 3.9E-07 8.5E-12 99.9 16.8 65 738-819 247-316 (322)
131 TIGR02094 more_P_ylases alpha- 98.6 1.2E-05 2.6E-10 95.1 27.8 179 337-525 387-597 (601)
132 TIGR02726 phenyl_P_delta pheny 98.5 4.4E-07 9.6E-12 90.1 10.8 138 572-824 6-157 (169)
133 KOG0853 Glycosyltransferase [C 98.5 5.2E-06 1.1E-10 94.0 19.6 183 337-531 271-466 (495)
134 TIGR03713 acc_sec_asp1 accesso 98.5 6E-06 1.3E-10 96.4 19.7 271 182-514 202-507 (519)
135 PRK00025 lpxB lipid-A-disaccha 98.5 2E-05 4.3E-10 88.8 23.0 139 329-495 175-342 (380)
136 smart00775 LNS2 LNS2 domain. T 98.4 6.1E-07 1.3E-11 88.2 6.9 67 575-645 1-88 (157)
137 PRK09814 beta-1,6-galactofuran 98.4 7.4E-06 1.6E-10 90.9 16.2 229 194-510 58-313 (333)
138 PF13692 Glyco_trans_1_4: Glyc 98.3 1.8E-06 3.9E-11 82.0 8.8 124 339-493 2-134 (135)
139 cd04299 GT1_Glycogen_Phosphory 98.3 2E-05 4.4E-10 95.0 19.7 181 338-528 477-689 (778)
140 TIGR01457 HAD-SF-IIA-hyp2 HAD- 98.2 3.1E-05 6.8E-10 82.2 14.7 65 574-643 2-73 (249)
141 TIGR00338 serB phosphoserine p 98.1 2.4E-05 5.1E-10 81.2 12.3 62 739-817 152-218 (219)
142 TIGR01458 HAD-SF-IIA-hyp3 HAD- 98.1 6.3E-05 1.4E-09 80.2 15.6 49 574-626 2-53 (257)
143 TIGR01488 HAD-SF-IB Haloacid D 98.0 1.6E-05 3.5E-10 79.3 9.1 41 734-777 137-177 (177)
144 PRK10444 UMP phosphatase; Prov 98.0 0.00015 3.3E-09 76.8 16.4 54 573-631 1-54 (248)
145 COG1519 KdtA 3-deoxy-D-manno-o 98.0 0.0034 7.3E-08 69.7 26.6 298 184-513 32-404 (419)
146 KOG1387 Glycosyltransferase [C 98.0 0.00017 3.7E-09 76.7 15.8 308 177-528 123-458 (465)
147 TIGR01452 PGP_euk phosphoglyco 98.0 0.00016 3.5E-09 78.2 15.3 49 573-626 2-50 (279)
148 TIGR01689 EcbF-BcbF capsule bi 97.9 1.5E-05 3.3E-10 74.8 6.0 51 574-625 2-55 (126)
149 PRK13225 phosphoglycolate phos 97.9 0.00031 6.7E-09 75.6 16.1 70 739-822 196-271 (273)
150 TIGR00215 lpxB lipid-A-disacch 97.9 0.0025 5.4E-08 72.2 23.6 140 329-495 180-348 (385)
151 PF05693 Glycogen_syn: Glycoge 97.9 0.0019 4.2E-08 74.7 22.3 105 416-520 444-573 (633)
152 TIGR01684 viral_ppase viral ph 97.8 5.3E-05 1.2E-09 80.4 7.1 72 572-647 125-202 (301)
153 PLN02645 phosphoglycolate phos 97.7 0.0013 2.7E-08 72.4 17.5 53 572-629 27-79 (311)
154 COG0546 Gph Predicted phosphat 97.7 0.00031 6.7E-09 73.1 11.3 66 741-820 148-219 (220)
155 PRK09552 mtnX 2-hydroxy-3-keto 97.7 0.00071 1.5E-08 70.3 13.8 73 737-824 146-218 (219)
156 PRK13223 phosphoglycolate phos 97.6 0.00061 1.3E-08 73.4 13.1 71 735-819 154-230 (272)
157 PRK13288 pyrophosphatase PpaX; 97.6 0.00026 5.6E-09 73.2 8.9 70 737-820 137-212 (214)
158 PRK06769 hypothetical protein; 97.5 0.0011 2.3E-08 66.4 11.5 49 571-620 2-54 (173)
159 PRK08942 D,D-heptose 1,7-bisph 97.4 0.0015 3.2E-08 65.8 12.3 65 741-819 106-177 (181)
160 PHA03398 viral phosphatase sup 97.4 0.00034 7.4E-09 74.5 7.0 72 572-647 127-204 (303)
161 TIGR02919 accessory Sec system 97.2 0.0031 6.7E-08 72.2 12.8 118 355-496 291-413 (438)
162 PRK10826 2-deoxyglucose-6-phos 97.0 0.0026 5.7E-08 66.1 9.2 63 739-815 149-216 (222)
163 TIGR03333 salvage_mtnX 2-hydro 97.0 0.015 3.2E-07 60.3 14.2 72 737-823 142-213 (214)
164 TIGR00213 GmhB_yaeD D,D-heptos 96.9 0.0062 1.4E-07 61.0 10.8 62 741-815 109-175 (176)
165 TIGR01525 ATPase-IB_hvy heavy 96.9 0.0045 9.7E-08 73.6 10.8 65 566-631 357-422 (556)
166 COG1778 Low specificity phosph 96.9 0.00068 1.5E-08 64.8 2.8 68 739-823 83-157 (170)
167 PRK10671 copA copper exporting 96.8 0.0065 1.4E-07 75.8 12.0 138 565-819 622-765 (834)
168 PLN02770 haloacid dehalogenase 96.8 0.0087 1.9E-07 63.5 11.0 70 740-823 166-242 (248)
169 PLN02779 haloacid dehalogenase 96.8 0.0069 1.5E-07 65.7 10.3 61 741-815 205-269 (286)
170 TIGR01681 HAD-SF-IIIC HAD-supe 96.8 0.0024 5.2E-08 60.5 5.8 55 574-629 1-65 (128)
171 TIGR03351 PhnX-like phosphonat 96.7 0.0096 2.1E-07 61.7 10.1 65 740-818 147-219 (220)
172 TIGR01497 kdpB K+-transporting 96.6 0.0097 2.1E-07 71.4 11.1 141 562-819 415-561 (675)
173 COG0560 SerB Phosphoserine pho 96.6 0.0028 6E-08 65.6 5.4 44 733-779 138-181 (212)
174 TIGR01672 AphA HAD superfamily 96.6 0.0048 1E-07 64.8 7.0 73 556-629 46-153 (237)
175 TIGR01662 HAD-SF-IIIA HAD-supe 96.5 0.0027 5.9E-08 60.2 4.5 56 574-630 1-69 (132)
176 TIGR01512 ATPase-IB2_Cd heavy 96.5 0.0094 2E-07 70.5 9.9 61 570-631 339-400 (536)
177 TIGR01261 hisB_Nterm histidino 96.5 0.019 4.2E-07 56.7 10.1 37 740-779 105-141 (161)
178 COG0647 NagD Predicted sugar p 96.2 0.37 8.1E-06 51.5 19.0 54 572-630 7-63 (269)
179 TIGR01686 FkbH FkbH-like domai 96.2 0.034 7.3E-07 61.4 11.6 57 572-629 2-66 (320)
180 TIGR01511 ATPase-IB1_Cu copper 96.2 0.022 4.8E-07 67.8 10.8 61 570-631 382-442 (562)
181 TIGR01664 DNA-3'-Pase DNA 3'-p 96.1 0.0078 1.7E-07 59.8 5.1 49 572-621 12-69 (166)
182 PRK11033 zntA zinc/cadmium/mer 96.0 0.031 6.8E-07 68.6 10.9 66 565-631 540-605 (741)
183 TIGR01522 ATPase-IIA2_Ca golgi 95.9 0.054 1.2E-06 68.0 12.7 165 565-819 495-671 (884)
184 PF13524 Glyco_trans_1_2: Glyc 95.9 0.025 5.5E-07 49.8 7.1 66 455-523 21-91 (92)
185 PRK06698 bifunctional 5'-methy 95.8 0.027 5.8E-07 65.4 8.9 66 740-821 387-456 (459)
186 COG2179 Predicted hydrolase of 95.8 0.033 7.2E-07 54.2 7.9 60 569-631 24-83 (175)
187 PRK08238 hypothetical protein; 95.8 0.047 1E-06 63.4 10.4 35 595-630 74-108 (479)
188 PF06437 ISN1: IMP-specific 5' 95.6 0.57 1.2E-05 51.5 17.1 204 553-767 123-378 (408)
189 TIGR01106 ATPase-IIC_X-K sodiu 95.6 0.084 1.8E-06 67.1 12.7 40 591-631 566-605 (997)
190 COG1778 Low specificity phosph 95.6 0.01 2.2E-07 57.0 3.4 62 569-631 4-72 (170)
191 KOG3120 Predicted haloacid deh 95.5 0.13 2.9E-06 52.1 10.9 90 729-823 153-248 (256)
192 KOG2941 Beta-1,4-mannosyltrans 95.5 0.33 7.1E-06 52.6 14.4 160 338-524 254-434 (444)
193 TIGR01517 ATPase-IIB_Ca plasma 95.4 0.1 2.2E-06 66.0 12.3 138 591-818 577-721 (941)
194 PRK01122 potassium-transportin 95.3 0.095 2.1E-06 63.2 11.2 139 564-819 416-560 (679)
195 PLN02940 riboflavin kinase 95.1 0.092 2E-06 59.4 9.8 62 740-815 152-217 (382)
196 PRK14010 potassium-transportin 95.1 0.14 3E-06 61.7 11.4 70 561-631 409-478 (673)
197 PF08323 Glyco_transf_5: Starc 95.0 0.075 1.6E-06 56.3 8.2 85 189-274 118-232 (245)
198 TIGR01491 HAD-SF-IB-PSPlk HAD- 95.0 0.033 7.2E-07 56.5 5.3 39 738-779 146-184 (201)
199 PTZ00445 p36-lilke protein; Pr 95.0 0.047 1E-06 55.5 6.0 158 560-779 30-199 (219)
200 TIGR01668 YqeG_hyp_ppase HAD s 95.0 0.073 1.6E-06 53.0 7.4 55 570-627 22-77 (170)
201 PF13344 Hydrolase_6: Haloacid 94.9 0.0064 1.4E-07 55.1 -0.2 50 576-630 1-53 (101)
202 TIGR01657 P-ATPase-V P-type AT 94.9 0.21 4.5E-06 64.0 12.9 65 732-819 784-852 (1054)
203 PF12710 HAD: haloacid dehalog 94.9 0.031 6.7E-07 56.2 4.5 34 596-630 92-125 (192)
204 TIGR01656 Histidinol-ppas hist 94.8 0.035 7.6E-07 53.8 4.5 46 574-620 1-53 (147)
205 PRK11009 aphA acid phosphatase 94.8 0.055 1.2E-06 56.8 6.2 62 558-620 48-140 (237)
206 PRK10517 magnesium-transportin 94.6 0.21 4.6E-06 62.7 11.7 137 591-819 548-690 (902)
207 PHA02530 pseT polynucleotide k 94.5 0.099 2.1E-06 57.0 7.8 57 573-630 158-223 (300)
208 PRK13222 phosphoglycolate phos 94.5 0.085 1.8E-06 54.6 7.0 67 740-820 151-223 (226)
209 PF09419 PGP_phosphatase: Mito 94.5 0.064 1.4E-06 53.1 5.5 51 554-608 24-74 (168)
210 PRK13226 phosphoglycolate phos 94.3 0.11 2.3E-06 54.4 7.2 66 740-819 153-225 (229)
211 TIGR01652 ATPase-Plipid phosph 94.3 0.27 5.9E-06 63.1 12.1 183 591-818 629-819 (1057)
212 COG4087 Soluble P-type ATPase 94.3 0.25 5.3E-06 46.1 8.4 54 755-821 90-149 (152)
213 TIGR01524 ATPase-IIIB_Mg magne 94.3 0.31 6.6E-06 61.1 12.2 137 591-819 513-655 (867)
214 PRK15122 magnesium-transportin 94.3 0.35 7.6E-06 60.8 12.7 137 591-819 548-690 (903)
215 TIGR01647 ATPase-IIIA_H plasma 94.1 0.44 9.5E-06 58.9 13.0 167 566-819 410-587 (755)
216 TIGR02137 HSK-PSP phosphoserin 94.0 0.08 1.7E-06 54.4 5.4 64 737-821 130-198 (203)
217 TIGR01675 plant-AP plant acid 94.0 0.13 2.7E-06 53.6 6.7 58 572-630 76-159 (229)
218 PLN02954 phosphoserine phospha 93.9 0.15 3.2E-06 53.0 7.2 66 736-818 152-223 (224)
219 PF13844 Glyco_transf_41: Glyc 93.8 0.58 1.3E-05 53.8 12.2 208 292-528 240-466 (468)
220 TIGR01454 AHBA_synth_RP 3-amin 93.8 0.16 3.6E-06 51.8 7.2 66 740-819 133-204 (205)
221 PF08645 PNK3P: Polynucleotide 93.7 0.055 1.2E-06 53.3 3.4 44 574-618 1-53 (159)
222 TIGR01460 HAD-SF-IIA Haloacid 93.7 0.088 1.9E-06 55.4 5.1 50 576-630 1-53 (236)
223 COG0474 MgtA Cation transport 93.7 0.42 9E-06 60.3 11.8 41 590-631 544-584 (917)
224 TIGR01449 PGP_bact 2-phosphogl 93.6 0.13 2.7E-06 52.8 5.9 64 740-817 143-212 (213)
225 TIGR01459 HAD-SF-IIA-hyp4 HAD- 93.4 0.097 2.1E-06 55.2 5.0 54 572-630 7-62 (242)
226 TIGR03568 NeuC_NnaA UDP-N-acet 93.4 4.7 0.0001 45.3 18.7 68 418-493 264-338 (365)
227 COG0381 WecB UDP-N-acetylgluco 93.4 9.6 0.00021 42.6 20.2 137 337-497 203-344 (383)
228 TIGR01490 HAD-SF-IB-hyp1 HAD-s 93.3 0.089 1.9E-06 53.6 4.3 42 736-780 152-193 (202)
229 TIGR01494 ATPase_P-type ATPase 93.1 0.48 1E-05 55.6 10.5 61 570-631 324-384 (499)
230 PLN03190 aminophospholipid tra 93.1 0.94 2E-05 58.4 13.7 39 591-630 724-762 (1178)
231 PRK13582 thrH phosphoserine ph 92.9 0.17 3.6E-06 51.7 5.7 64 738-822 131-199 (205)
232 KOG0210 P-type ATPase [Inorgan 92.7 0.78 1.7E-05 53.8 10.9 173 592-819 657-833 (1051)
233 TIGR01663 PNK-3'Pase polynucle 92.7 0.12 2.5E-06 60.6 4.5 50 571-621 166-224 (526)
234 PLN02919 haloacid dehalogenase 92.7 0.74 1.6E-05 58.9 12.0 61 740-814 220-285 (1057)
235 PF13242 Hydrolase_like: HAD-h 92.4 0.38 8.2E-06 40.8 6.2 57 743-813 9-74 (75)
236 PF13439 Glyco_transf_4: Glyco 92.2 0.031 6.8E-07 54.5 -0.8 96 195-315 76-177 (177)
237 TIGR01491 HAD-SF-IB-PSPlk HAD- 92.2 0.29 6.4E-06 49.5 6.3 35 596-631 83-117 (201)
238 PLN02954 phosphoserine phospha 92.1 0.23 4.9E-06 51.5 5.4 36 595-631 86-121 (224)
239 TIGR01533 lipo_e_P4 5'-nucleot 91.9 0.15 3.2E-06 54.6 3.8 58 571-629 73-156 (266)
240 TIGR01685 MDP-1 magnesium-depe 91.9 0.25 5.4E-06 49.4 5.1 57 573-630 2-82 (174)
241 PF08235 LNS2: LNS2 (Lipin/Ned 91.6 0.27 5.9E-06 48.0 4.9 56 575-631 1-67 (157)
242 PF02350 Epimerase_2: UDP-N-ac 91.5 19 0.00042 40.1 20.3 257 182-494 51-318 (346)
243 TIGR01116 ATPase-IIA1_Ca sarco 91.4 0.31 6.7E-06 61.6 6.4 41 590-631 534-574 (917)
244 smart00577 CPDc catalytic doma 91.3 0.31 6.8E-06 47.3 5.1 58 572-631 1-81 (148)
245 PF00702 Hydrolase: haloacid d 90.9 0.28 6.1E-06 50.0 4.6 33 743-778 183-215 (215)
246 TIGR01680 Veg_Stor_Prot vegeta 90.8 0.25 5.5E-06 52.4 4.0 51 572-623 100-174 (275)
247 COG0763 LpxB Lipid A disacchar 89.6 38 0.00083 37.9 19.7 259 203-523 87-375 (381)
248 TIGR03492 conserved hypothetic 89.5 5.2 0.00011 45.5 13.7 135 339-494 207-364 (396)
249 PF12689 Acid_PPase: Acid Phos 89.2 8.9 0.00019 38.1 13.4 93 667-777 50-143 (169)
250 PRK13478 phosphonoacetaldehyde 89.1 0.9 1.9E-05 48.6 6.8 69 741-823 161-259 (267)
251 COG0560 SerB Phosphoserine pho 89.1 0.48 1E-05 49.0 4.5 38 593-631 77-114 (212)
252 PRK05446 imidazole glycerol-ph 88.8 0.45 9.8E-06 53.0 4.3 47 572-619 1-55 (354)
253 PF03767 Acid_phosphat_B: HAD 88.1 0.057 1.2E-06 56.6 -3.1 53 571-624 70-145 (229)
254 PRK13582 thrH phosphoserine ph 87.8 0.5 1.1E-05 48.1 3.7 34 596-631 71-104 (205)
255 TIGR02245 HAD_IIID1 HAD-superf 86.8 0.97 2.1E-05 46.0 5.0 59 570-630 18-80 (195)
256 PF03031 NIF: NLI interacting 86.8 0.56 1.2E-05 45.8 3.2 56 574-631 1-72 (159)
257 TIGR01456 CECR5 HAD-superfamil 86.8 1.2 2.5E-05 49.3 6.0 48 575-627 2-56 (321)
258 TIGR01545 YfhB_g-proteo haloac 86.7 1.5 3.2E-05 45.3 6.5 21 760-780 177-197 (210)
259 TIGR01422 phosphonatase phosph 86.6 1.5 3.4E-05 46.3 6.8 64 741-818 159-252 (253)
260 PF06888 Put_Phosphatase: Puta 86.5 0.69 1.5E-05 48.5 3.8 81 734-821 145-233 (234)
261 PF05152 DUF705: Protein of un 86.4 2.2 4.8E-05 45.4 7.4 59 572-631 121-179 (297)
262 TIGR01489 DKMTPPase-SF 2,3-dik 86.3 1.3 2.8E-05 44.2 5.6 40 735-780 145-184 (188)
263 PRK13222 phosphoglycolate phos 86.2 1.1 2.5E-05 46.1 5.3 35 596-631 96-130 (226)
264 COG2217 ZntA Cation transport 86.1 1 2.3E-05 54.6 5.6 67 730-819 580-652 (713)
265 TIGR01490 HAD-SF-IB-hyp1 HAD-s 85.9 1.3 2.8E-05 45.0 5.5 36 595-631 89-124 (202)
266 PLN02575 haloacid dehalogenase 84.6 3 6.5E-05 47.0 8.0 72 740-825 274-349 (381)
267 TIGR02251 HIF-SF_euk Dullard-l 84.5 2 4.4E-05 42.3 6.0 57 573-631 1-78 (162)
268 TIGR01523 ATPase-IID_K-Na pota 83.9 1.7 3.7E-05 55.6 6.4 149 591-819 644-799 (1053)
269 TIGR01489 DKMTPPase-SF 2,3-dik 83.1 1.3 2.9E-05 44.0 4.1 37 594-631 73-109 (188)
270 TIGR02137 HSK-PSP phosphoserin 82.4 1.4 3.1E-05 45.2 4.0 36 594-631 69-104 (203)
271 PRK14988 GMP/IMP nucleotidase; 82.2 2.9 6.4E-05 43.5 6.3 69 740-821 151-221 (224)
272 PF07429 Glyco_transf_56: 4-al 82.1 26 0.00056 38.7 13.5 130 346-491 192-330 (360)
273 TIGR02250 FCP1_euk FCP1-like p 82.0 2.1 4.6E-05 42.0 4.8 60 570-631 3-94 (156)
274 KOG0206 P-type ATPase [General 81.9 5.5 0.00012 50.6 9.5 40 733-778 775-814 (1151)
275 PRK10725 fructose-1-P/6-phosph 81.7 0.72 1.6E-05 46.2 1.5 37 740-779 144-180 (188)
276 PLN03243 haloacid dehalogenase 81.2 4.1 9E-05 43.5 7.1 69 741-824 168-241 (260)
277 COG3882 FkbH Predicted enzyme 80.8 4.3 9.3E-05 46.2 7.2 75 559-634 208-295 (574)
278 KOG3040 Predicted sugar phosph 79.9 19 0.00041 36.7 10.5 55 571-630 5-62 (262)
279 COG0241 HisB Histidinol phosph 79.9 2.2 4.8E-05 42.8 4.2 45 573-618 5-55 (181)
280 PRK11587 putative phosphatase; 79.8 0.86 1.9E-05 47.1 1.3 60 741-814 141-203 (218)
281 COG3700 AphA Acid phosphatase 79.7 2.6 5.6E-05 41.5 4.4 72 557-628 47-148 (237)
282 PF13579 Glyco_trans_4_4: Glyc 79.7 1.6 3.4E-05 41.5 3.1 68 202-274 74-146 (160)
283 COG4030 Uncharacterized protei 79.4 2 4.4E-05 43.9 3.7 38 739-780 191-228 (315)
284 PLN02575 haloacid dehalogenase 79.3 2.8 6.1E-05 47.2 5.3 34 597-631 220-253 (381)
285 COG3914 Spy Predicted O-linked 78.4 22 0.00047 41.6 11.9 110 336-463 427-538 (620)
286 COG0816 Predicted endonuclease 77.8 13 0.00028 35.8 8.4 73 356-438 40-112 (141)
287 TIGR02252 DREG-2 REG-2-like, H 77.7 1.5 3.1E-05 44.7 2.3 36 741-779 163-199 (203)
288 PRK11590 hypothetical protein; 77.6 2.6 5.7E-05 43.4 4.2 38 737-780 161-198 (211)
289 KOG0208 Cation transport ATPas 77.4 9.3 0.0002 47.1 8.9 78 546-631 663-742 (1140)
290 TIGR02009 PGMB-YQAB-SF beta-ph 77.3 2.3 4.9E-05 42.3 3.5 36 741-779 145-180 (185)
291 TIGR02253 CTE7 HAD superfamily 77.2 4.2 9.2E-05 41.8 5.6 37 740-779 152-189 (221)
292 TIGR01545 YfhB_g-proteo haloac 76.9 2.7 5.9E-05 43.3 4.0 15 572-586 4-18 (210)
293 KOG3109 Haloacid dehalogenase- 76.6 3.1 6.7E-05 42.6 4.1 67 742-824 164-233 (244)
294 PRK11587 putative phosphatase; 76.5 5.5 0.00012 41.0 6.2 30 572-608 2-31 (218)
295 TIGR01544 HAD-SF-IE haloacid d 76.0 2.6 5.7E-05 45.2 3.7 38 737-777 190-230 (277)
296 PF06941 NT5C: 5' nucleotidase 76.0 2.2 4.7E-05 43.2 3.0 28 594-622 74-101 (191)
297 TIGR02253 CTE7 HAD superfamily 75.8 3 6.6E-05 42.8 4.1 14 573-586 2-15 (221)
298 PLN03243 haloacid dehalogenase 75.7 3.3 7.1E-05 44.3 4.3 35 570-611 21-56 (260)
299 PRK10748 flavin mononucleotide 75.2 1.7 3.6E-05 45.7 2.0 37 740-779 165-202 (238)
300 TIGR01548 HAD-SF-IA-hyp1 haloa 75.1 1.3 2.9E-05 44.9 1.1 33 740-775 163-195 (197)
301 PRK10563 6-phosphogluconate ph 74.6 2.9 6.2E-05 43.1 3.5 37 740-779 144-180 (221)
302 PRK09449 dUMP phosphatase; Pro 74.0 9.5 0.00021 39.3 7.3 65 741-819 153-223 (224)
303 TIGR01422 phosphonatase phosph 73.8 2.6 5.7E-05 44.5 3.0 15 572-586 1-15 (253)
304 KOG1050 Trehalose-6-phosphate 73.6 0.27 5.8E-06 59.5 -5.0 209 562-778 178-423 (732)
305 COG4359 Uncharacterized conser 72.9 5.5 0.00012 39.7 4.6 41 735-782 143-183 (220)
306 PHA02597 30.2 hypothetical pro 72.0 1.8 3.9E-05 43.8 1.2 60 740-815 132-195 (197)
307 PRK13478 phosphonoacetaldehyde 72.0 3 6.5E-05 44.6 3.0 15 572-586 3-17 (267)
308 PRK11590 hypothetical protein; 71.9 2 4.4E-05 44.2 1.5 15 572-586 5-19 (211)
309 PRK14988 GMP/IMP nucleotidase; 71.7 2.1 4.5E-05 44.6 1.6 15 572-586 9-23 (224)
310 TIGR02254 YjjG/YfnB HAD superf 71.2 2.5 5.4E-05 43.5 2.1 66 740-818 154-224 (224)
311 COG0637 Predicted phosphatase/ 71.2 3.8 8.3E-05 42.6 3.5 25 755-779 156-180 (221)
312 PF02684 LpxB: Lipid-A-disacch 70.3 1.9E+02 0.0042 32.6 20.7 235 199-497 82-343 (373)
313 PHA02597 30.2 hypothetical pro 70.2 6.8 0.00015 39.5 5.0 22 759-780 121-142 (197)
314 TIGR01993 Pyr-5-nucltdase pyri 70.0 3.6 7.9E-05 41.1 2.9 37 740-779 143-179 (184)
315 KOG1615 Phosphoserine phosphat 69.4 0.87 1.9E-05 45.6 -1.7 36 739-779 159-194 (227)
316 TIGR01990 bPGM beta-phosphoglu 69.1 5.5 0.00012 39.5 4.0 37 740-779 143-179 (185)
317 PRK13226 phosphoglycolate phos 69.0 2.1 4.6E-05 44.6 1.0 29 573-608 12-40 (229)
318 cd03784 GT1_Gtf_like This fami 68.6 2E+02 0.0044 32.2 19.2 69 419-493 291-371 (401)
319 TIGR01990 bPGM beta-phosphoglu 68.5 4.2 9.2E-05 40.4 3.0 27 575-608 1-27 (185)
320 TIGR01426 MGT glycosyltransfer 68.1 46 0.001 37.5 11.7 93 419-520 278-384 (392)
321 COG0707 MurG UDP-N-acetylgluco 67.0 1.4E+02 0.003 33.5 14.9 82 427-514 244-342 (357)
322 KOG2884 26S proteasome regulat 66.6 72 0.0016 32.7 11.0 47 456-506 186-237 (259)
323 TIGR02254 YjjG/YfnB HAD superf 65.6 14 0.0003 37.8 6.3 14 573-586 1-14 (224)
324 KOG2116 Protein involved in pl 65.6 6.3 0.00014 46.3 3.9 77 571-648 528-615 (738)
325 TIGR01549 HAD-SF-IA-v1 haloaci 65.4 4.6 0.0001 38.9 2.5 35 740-778 120-154 (154)
326 PF06888 Put_Phosphatase: Puta 64.5 12 0.00025 39.4 5.4 36 595-630 73-109 (234)
327 TIGR01428 HAD_type_II 2-haloal 64.2 5.4 0.00012 40.3 2.9 37 740-779 150-186 (198)
328 PRK14986 glycogen phosphorylas 64.0 1E+02 0.0022 38.2 13.8 130 337-470 541-681 (815)
329 PRK09449 dUMP phosphatase; Pro 63.5 3.7 8E-05 42.4 1.5 15 572-586 2-16 (224)
330 COG1011 Predicted hydrolase (H 62.8 20 0.00044 36.7 7.0 63 742-820 158-228 (229)
331 PF06258 Mito_fiss_Elm1: Mitoc 62.6 86 0.0019 34.4 12.0 102 327-448 134-241 (311)
332 TIGR01662 HAD-SF-IIIA HAD-supe 62.5 8.1 0.00018 36.2 3.5 37 740-779 87-125 (132)
333 TIGR01656 Histidinol-ppas hist 62.2 8.2 0.00018 37.2 3.6 38 739-779 102-139 (147)
334 COG4996 Predicted phosphatase 61.5 14 0.00031 34.8 4.6 55 574-629 1-76 (164)
335 TIGR01493 HAD-SF-IA-v2 Haloaci 61.4 5.7 0.00012 39.1 2.4 32 741-775 142-173 (175)
336 PF00343 Phosphorylase: Carboh 61.0 1.3E+02 0.0029 36.7 13.9 132 337-470 442-582 (713)
337 PF13419 HAD_2: Haloacid dehal 60.6 10 0.00022 36.6 4.1 37 740-779 135-171 (176)
338 KOG0204 Calcium transporting A 60.6 52 0.0011 40.4 10.2 140 593-820 647-793 (1034)
339 TIGR01549 HAD-SF-IA-v1 haloaci 60.2 10 0.00022 36.4 3.9 26 575-607 1-26 (154)
340 KOG0207 Cation transport ATPas 59.1 15 0.00032 45.2 5.6 67 730-819 766-838 (951)
341 COG5083 SMP2 Uncharacterized p 58.1 4.9 0.00011 44.9 1.3 72 570-645 372-451 (580)
342 PF12000 Glyco_trans_4_3: Gkyc 55.9 68 0.0015 32.0 8.8 51 179-231 42-94 (171)
343 PRK10748 flavin mononucleotide 55.7 28 0.00061 36.4 6.5 15 572-586 9-23 (238)
344 cd04300 GT1_Glycogen_Phosphory 54.6 1.9E+02 0.0042 35.9 14.0 131 336-470 527-668 (797)
345 TIGR02009 PGMB-YQAB-SF beta-ph 53.5 12 0.00026 37.1 3.2 29 573-608 1-29 (185)
346 PF09949 DUF2183: Uncharacteri 52.1 34 0.00073 30.9 5.5 35 355-393 49-83 (100)
347 KOG2134 Polynucleotide kinase 51.9 11 0.00023 42.0 2.6 47 571-618 73-128 (422)
348 PF11019 DUF2608: Protein of u 51.8 25 0.00053 37.4 5.3 57 734-800 157-213 (252)
349 TIGR02247 HAD-1A3-hyp Epoxide 51.2 7.6 0.00017 39.6 1.4 36 741-779 155-190 (211)
350 KOG1615 Phosphoserine phosphat 50.5 20 0.00044 36.2 4.0 38 593-631 88-125 (227)
351 KOG0202 Ca2+ transporting ATPa 50.2 24 0.00051 43.1 5.3 57 567-631 565-621 (972)
352 PLN02811 hydrolase 49.2 25 0.00055 36.2 4.9 38 742-779 141-178 (220)
353 TIGR01428 HAD_type_II 2-haloal 49.0 21 0.00045 36.0 4.1 14 573-586 1-14 (198)
354 PRK02797 4-alpha-L-fucosyltran 48.9 1.6E+02 0.0035 32.3 10.8 114 346-476 153-272 (322)
355 PF13528 Glyco_trans_1_3: Glyc 48.5 2.2E+02 0.0047 30.7 12.4 113 337-490 191-316 (318)
356 COG1011 Predicted hydrolase (H 48.3 9.6 0.00021 39.2 1.6 17 571-587 2-18 (229)
357 TIGR02247 HAD-1A3-hyp Epoxide 48.3 66 0.0014 32.6 7.8 14 573-586 2-15 (211)
358 COG4087 Soluble P-type ATPase 47.8 15 0.00033 34.6 2.6 48 576-629 17-64 (152)
359 KOG4626 O-linked N-acetylgluco 46.6 3.1E+02 0.0066 32.9 13.0 158 354-533 772-945 (966)
360 PRK10725 fructose-1-P/6-phosph 46.4 26 0.00057 34.8 4.4 31 571-608 3-33 (188)
361 TIGR01509 HAD-SF-IA-v3 haloaci 46.3 25 0.00055 34.5 4.2 36 741-779 143-178 (183)
362 TIGR01548 HAD-SF-IA-hyp1 haloa 46.2 22 0.00048 35.9 3.8 26 575-607 2-27 (197)
363 TIGR00250 RNAse_H_YqgF RNAse H 46.2 1E+02 0.0023 29.1 8.1 71 356-436 35-105 (130)
364 PRK10563 6-phosphogluconate ph 45.5 18 0.00039 37.1 3.1 29 572-607 3-31 (221)
365 PRK14985 maltodextrin phosphor 45.5 1.8E+02 0.004 36.0 11.8 130 337-470 527-667 (798)
366 TIGR02252 DREG-2 REG-2-like, H 44.1 24 0.00051 35.7 3.7 13 574-586 1-13 (203)
367 PRK04128 1-(5-phosphoribosyl)- 44.1 56 0.0012 34.2 6.5 62 560-629 31-93 (228)
368 TIGR01681 HAD-SF-IIIC HAD-supe 43.9 33 0.00071 32.2 4.3 34 739-775 90-125 (128)
369 TIGR03590 PseG pseudaminic aci 43.7 97 0.0021 33.3 8.5 79 338-442 170-248 (279)
370 KOG1618 Predicted phosphatase 41.7 20 0.00043 38.9 2.7 42 572-617 34-78 (389)
371 COG0058 GlgP Glucan phosphoryl 41.4 1.9E+02 0.0041 35.5 11.0 123 338-470 486-616 (750)
372 PRK09456 ?-D-glucose-1-phospha 41.4 33 0.00071 34.7 4.3 37 740-779 143-179 (199)
373 COG1819 Glycosyl transferases, 40.7 1.6E+02 0.0035 33.6 10.1 98 420-525 288-397 (406)
374 TIGR01668 YqeG_hyp_ppase HAD s 40.7 28 0.00061 34.4 3.5 37 740-779 93-130 (170)
375 PF00702 Hydrolase: haloacid d 40.6 9.9 0.00022 38.4 0.3 30 573-605 1-34 (215)
376 TIGR01691 enolase-ppase 2,3-di 40.6 43 0.00092 34.9 4.9 37 740-779 154-190 (220)
377 COG2503 Predicted secreted aci 40.4 35 0.00077 35.7 4.1 53 570-623 76-151 (274)
378 TIGR01509 HAD-SF-IA-v3 haloaci 40.2 12 0.00026 36.8 0.8 12 575-586 1-12 (183)
379 PRK09456 ?-D-glucose-1-phospha 40.1 15 0.00032 37.3 1.4 13 574-586 1-13 (199)
380 PRK00109 Holliday junction res 40.0 1.5E+02 0.0033 28.3 8.2 71 357-437 42-112 (138)
381 PF04312 DUF460: Protein of un 39.5 29 0.00063 33.1 3.1 54 573-630 43-98 (138)
382 COG3660 Predicted nucleoside-d 39.4 2.4E+02 0.0053 30.2 10.0 31 203-233 72-102 (329)
383 KOG2882 p-Nitrophenyl phosphat 39.1 23 0.0005 38.2 2.7 55 571-630 20-74 (306)
384 COG4822 CbiK Cobalamin biosynt 38.4 4.7E+02 0.01 27.1 15.8 158 236-438 33-193 (265)
385 PF12710 HAD: haloacid dehalog 38.3 15 0.00032 36.6 1.0 36 739-775 157-192 (192)
386 PHA02530 pseT polynucleotide k 36.7 54 0.0012 35.4 5.3 38 739-779 252-290 (300)
387 TIGR01993 Pyr-5-nucltdase pyri 36.7 40 0.00087 33.4 4.0 12 575-586 2-13 (184)
388 TIGR02093 P_ylase glycogen/sta 35.4 4E+02 0.0087 33.1 12.6 130 337-470 525-665 (794)
389 TIGR01685 MDP-1 magnesium-depe 33.6 70 0.0015 32.0 5.0 40 739-778 108-150 (174)
390 TIGR01493 HAD-SF-IA-v2 Haloaci 32.4 41 0.00088 33.0 3.2 26 575-607 1-26 (175)
391 TIGR01456 CECR5 HAD-superfamil 31.4 83 0.0018 34.7 5.7 49 757-818 262-320 (321)
392 PLN02177 glycerol-3-phosphate 30.7 55 0.0012 38.4 4.3 34 740-780 177-210 (497)
393 smart00577 CPDc catalytic doma 29.9 28 0.00062 33.5 1.5 32 744-778 104-135 (148)
394 PRK10422 lipopolysaccharide co 29.7 4.4E+02 0.0096 29.1 11.3 87 337-442 182-269 (352)
395 PF11019 DUF2608: Protein of u 28.7 91 0.002 33.1 5.2 34 596-630 84-117 (252)
396 PF13477 Glyco_trans_4_2: Glyc 28.7 81 0.0017 29.3 4.4 40 192-233 67-107 (139)
397 PRK14057 epimerase; Provisiona 27.8 4.6E+02 0.01 28.0 10.1 63 375-441 157-220 (254)
398 COG2248 Predicted hydrolase (m 27.4 7.2E+02 0.016 26.6 11.0 158 178-384 47-211 (304)
399 PRK05446 imidazole glycerol-ph 27.0 67 0.0015 36.0 4.0 39 738-779 104-142 (354)
400 PRK13587 1-(5-phosphoribosyl)- 26.0 1.8E+02 0.004 30.4 6.8 62 560-629 32-96 (234)
401 smart00775 LNS2 LNS2 domain. T 25.5 1.4E+02 0.0029 29.2 5.4 39 739-779 102-140 (157)
402 PRK09722 allulose-6-phosphate 25.3 5.7E+02 0.012 26.8 10.2 64 374-441 132-196 (229)
403 KOG0331 ATP-dependent RNA heli 25.1 3.8E+02 0.0082 31.6 9.6 95 341-445 130-225 (519)
404 PRK08091 ribulose-phosphate 3- 24.8 5.8E+02 0.013 26.7 10.1 64 375-442 143-207 (228)
405 TIGR02201 heptsyl_trn_III lipo 24.7 7.6E+02 0.017 27.0 12.0 86 338-442 181-267 (344)
406 PHA03392 egt ecdysteroid UDP-g 23.8 8.8E+02 0.019 28.6 12.7 75 418-496 348-434 (507)
407 TIGR01664 DNA-3'-Pase DNA 3'-p 23.3 82 0.0018 31.1 3.4 36 741-779 111-156 (166)
408 KOG2670 Enolase [Carbohydrate 22.5 75 0.0016 34.5 3.0 41 139-189 272-312 (433)
409 TIGR01672 AphA HAD superfamily 22.5 96 0.0021 32.7 3.9 29 761-800 187-215 (237)
410 COG4359 Uncharacterized conser 21.9 68 0.0015 32.2 2.4 37 594-631 74-110 (220)
411 PRK08745 ribulose-phosphate 3- 21.6 9.2E+02 0.02 25.1 12.2 63 375-441 135-198 (223)
412 COG0036 Rpe Pentose-5-phosphat 20.9 5.9E+02 0.013 26.5 9.0 76 358-443 122-198 (220)
413 KOG2411 Aspartyl-tRNA syntheta 20.5 2.9E+02 0.0064 32.0 7.2 79 266-348 497-578 (628)
No 1
>PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming]
Probab=100.00 E-value=3e-188 Score=1675.32 Aligned_cols=828 Identities=92% Similarity=1.455 Sum_probs=778.8
Q ss_pred CCcccccchhhhhcCCCCCccccccCccceeeccccccCCCCCCCCCCCCCCCCCCCCCCcEEEEEcCCccceeecCCCC
Q 044635 1 MVSKSYSNLLELASGEAPSFGRMRRRIPRIMTVAGIISDLDDDPADSVCSDPSSSSVQRDRIIIVANQLPIRAQRKSDNS 80 (831)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~iivsnrlP~~~~~~~~~~ 80 (831)
|+||||+|||||++||++.++++.+++|++|++||+++++|+++.++.+++.++++.+.+|+||||||||+.++++++|+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rliiVsnrlPv~~~~~~~g~ 80 (854)
T PLN02205 1 MVSRSYSNLLELASGESPSFGRMNRRIPRIMTVAGIMSDIDDDPSESVCSDPSSSSVPKDRIIIVANQLPIRAQRKSDGS 80 (854)
T ss_pred CcChhhccHHHhccCCcccccccccCCCceecCCCcccccccccccccccccccCCCCCCcEEEEEccCceEEEEcCCCC
Confidence 89999999999999999999999999999999999999999988877777776566777999999999999999876654
Q ss_pred CCeEEeeCCCchHHHhhhccCCCCCCeEEEeccCCcCCcchhhhHhHhhccCeeEEEEeCChHhhhhHhhhhhccccccc
Q 044635 81 KGWIFSWDENSLLLQLKDGLGDDDIEVIYVGCLKEEIHVNEQDEVSQILLDTFKCVPTFLPPDLFSRYYHGFCKQQLWPL 160 (831)
Q Consensus 81 ~~~~~~~~~~~l~~~l~~~l~~~~~~~~wvG~~~~~~~~~~~~~~~~~~~~~~~~~pv~l~~~~~~~~y~gf~~~~lWp~ 160 (831)
++|+|++++|||+++|++++.....+++||||+|.++++++|+++.+.++++|+|+||||+++++++||+||||++|||+
T Consensus 81 ~~~~~~~~~ggL~~~l~~~~~~~~~~~~wvG~~~~~~~~~~~~~~~~~l~~~~~~~pv~l~~~~~~~~Y~gf~n~~LWPl 160 (854)
T PLN02205 81 KGWIFSWDENSLLLQLKDGLGDDEIEVIYVGCLKEEIHLNEQEEVSQILLETFKCVPTFLPPDLFTRYYHGFCKQQLWPL 160 (854)
T ss_pred cceEEEeCCCchHHHHhhhhhcccCceEEEEecCCCCCchhhhhHHHHHhcCceEEEeeCCHHHHHHHHHhhhhccccch
Confidence 68999999999999999988642268999999999888888888888888899999999999999999999999999999
Q ss_pred cccCCCCCCCCCCccChhhHHHHHHHHHHHHHHHHHHcCCCCCEEEEeCccccchHHHHHhhcCCCeEEEEEeccCCChH
Q 044635 161 FHYMLPLSPDLGGRFNRSLWQAYVSVNKIFADRIMEVINPEDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSE 240 (831)
Q Consensus 161 ~H~~~~~~~~~~~~~~~~~w~~Y~~vN~~fa~~i~~~~~~~~d~vwvhDyhL~llp~~lr~~~~~~~i~~flH~PfP~~e 240 (831)
|||+++..|+++.+|+++.|++|++||++||++|+++++|++|+|||||||||+||+|||+++|+++||||||||||++|
T Consensus 161 fH~~~~~~~~~~~~f~~~~w~~Y~~vN~~FA~~v~~~~~~~~d~VWVhDYhL~llP~~LR~~~~~~~IgfFlHiPFPs~e 240 (854)
T PLN02205 161 FHYMLPLSPDLGGRFNRSLWQAYVSVNKIFADRIMEVINPEDDFVWIHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSE 240 (854)
T ss_pred hccCCCCCccccccccHHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEeCchhhHHHHHHHhhCCCCcEEEEecCCCCChH
Confidence 99998888887779999999999999999999999999986799999999999999999999999999999999999999
Q ss_pred HhhcCCChHHHHHHHhcCCeEeecCHHhHHHHHHHHHHHhCCeecccCceeeEEEcCEEEEEEEeecccChHHHHHhhCC
Q 044635 241 IYKTLPIREEILRALLNSDLIGFHTFDYARHFLSCCSRMLGLTYESKRGYIGLEYYGRTVSIKILPVGIHMGQLQSVLSL 320 (831)
Q Consensus 241 ~f~~lp~r~eil~~ll~~dligf~t~~~~~~Fl~~~~r~l~~~~~~~~~~~~~~~~gr~~~i~v~P~GId~~~~~~~~~~ 320 (831)
+||+||||+|||+|||+||+|||||++|+|||++||+|+||+++..++|.++++|+||.++|+++|+|||++.|...+..
T Consensus 241 ifr~LP~r~eiL~glL~aDlIGFht~~yar~Fl~~~~r~lgl~~~~~~g~~~~~~~Gr~v~v~~~PigId~~~~~~~~~~ 320 (854)
T PLN02205 241 IYKTLPIREELLRALLNSDLIGFHTFDYARHFLSCCSRMLGLSYESKRGYIGLEYYGRTVSIKILPVGIHMGQLQSVLSL 320 (854)
T ss_pred HHhhCCcHHHHHHHHhcCCeEEecCHHHHHHHHHHHHHHhCCcccCCCcceeEEECCcEEEEEEEeCeEcHHHHHHHhcC
Confidence 99999999999999999999999999999999999999999999888888899999999999999999999999999999
Q ss_pred cchHHHHHHHHHHhccCCcEEEEeccCcccccCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHH
Q 044635 321 PGTEAKVSELIKQFHDQGKVMLLGVDDMDIFKGISLKLLAMEQLLIQHPEWQGKVVLVQIANPARGRGKDVKEVQAETYS 400 (831)
Q Consensus 321 ~~~~~~~~~lr~~~~~~~~~iil~VdRld~~KGi~~~l~A~~~lL~~~P~~~~~vvLvqig~p~r~~~~~~~~l~~~i~~ 400 (831)
+++.+++++++++++.+|+++|+||||+|++|||.+||+||++||++||+|+|||+||||++|+|+++++|++++++|++
T Consensus 321 ~~~~~~~~~l~~~~~~~~~~~ilgVDrlD~~KGi~~kl~A~e~~L~~~P~~~gkvvlvQia~psr~~~~~y~~~~~ev~~ 400 (854)
T PLN02205 321 PETEAKVKELIKQFCDQDRIMLLGVDDMDIFKGISLKLLAMEQLLMQHPEWQGKVVLVQIANPARGKGKDVKEVQAETHS 400 (854)
T ss_pred hhHHHHHHHHHHHhccCCCEEEEEccCcccccCHHHHHHHHHHHHHhCccccCCEEEEEEecCCCcccHHHHHHHHHHHH
Confidence 99999999999999433799999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhccCCCCCCccEEEecCCCCHHHHHHHHHHcCEeEECCCccCCC--------CCC---------------CCCce
Q 044635 401 TVERINQTFGKPGYDPVVLIDEPLKFYERIAYYVVAECCLVTAVRDGSE--------PSS---------------PKKSM 457 (831)
Q Consensus 401 lv~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv~vvtS~~eGma--------~~~---------------~~~g~ 457 (831)
+|++||++||+.+|+||+|+++.++++|+.|||++||||++||+||||+ |+. +++|+
T Consensus 401 ~v~rIN~~fg~~~~~Pv~~~~~~~~~~e~~aly~~ADv~lVT~lRDGMNLva~Eyia~~~~~~~~~~~~~~~~~~~~~gv 480 (854)
T PLN02205 401 TVKRINETFGKPGYDPIVLIDAPLKFYERVAYYVVAECCLVTAVRDGMNLIPYEYIISRQGNEKLDKLLGLEPSTPKKSM 480 (854)
T ss_pred HHHHHHhhcCCCCCceEEEEecCCCHHHHHHHHHhccEEEeccccccccccchheeEEccCccccccccccccccCCCCc
Confidence 9999999999999999999999999999999999999999999999993 332 25899
Q ss_pred EEEecccccccccCCCceeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHhhhcc
Q 044635 458 LVVSEFIGCSPSLSGAIRVNPWNIDAVSDAMDSALEMADQEKQLRHEKHYRYVSTHDVGYWARSFLQDLERTCREHVRQR 537 (831)
Q Consensus 458 lVlSe~~G~~~~l~~allVnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l~~~~~~~~~~~ 537 (831)
||+|||+||+++|++|++|||||++++|+||++||+||.+||+.||++++++|++||+.+|+++|+++|.++|++|++++
T Consensus 481 LiLSEfaGaa~~L~~Ai~VNP~d~~~~a~ai~~AL~m~~~Er~~R~~~~~~~v~~~d~~~W~~~fl~~l~~~~~~~~~~~ 560 (854)
T PLN02205 481 LVVSEFIGCSPSLSGAIRVNPWNIDAVADAMDSALEMAEPEKQLRHEKHYRYVSTHDVGYWARSFLQDLERTCRDHSRRR 560 (854)
T ss_pred eEeeeccchhHHhCcCeEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHhhhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999998899
Q ss_pred ccccCcCcceeEeecCcccccCCHHHHHHHHHhcCceeEEecCCCccCCCCCCCCCCCHHHHHHHHHHhhcCCCeEEEEC
Q 044635 538 CWGIGFGLSFRVVALDPNFKKLSMEHIVSAYKRTTTRAILLDYDGTLMPQASIDKSPNSKTIDILNSLCRDKNNMVFLVS 617 (831)
Q Consensus 538 ~~~~~~g~~~~~~~~~~~f~~l~~~~~~~~y~~s~~rli~~D~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~S 617 (831)
||++|||++||+++++|+|++|+++.++++|+++++|+|++||||||++..+....|+++++++|++|++++++.|+|+|
T Consensus 561 ~~~~g~g~~~~~~~~~~~~~~l~~~~i~~~y~~~~~rlI~LDyDGTLlp~~~~~~~p~~~~~~~L~~L~~d~g~~VaIvS 640 (854)
T PLN02205 561 CWGIGFGLSFRVVALDPNFRKLSMEHIVSAYKRTTTRAILLDYDGTLMPQASIDKSPSSKSIDILNTLCRDKNNMVFIVS 640 (854)
T ss_pred hcccccccccccccccccccccCHHHHHHHHHhhcCeEEEEecCCcccCCccccCCCCHHHHHHHHHHHhcCCCEEEEEe
Confidence 99999999999999999999999999999999999999999999999996544668999999999999999999999999
Q ss_pred CCCHhhHHHHhCCCCCceEEecCCEEEEeCCCceEEEcCCcCCccHHHHHHHHHHHHhccCCCeeEeeccceEEEeeccC
Q 044635 618 AKSRKTLAEWFSPCENLGIAAEHGYFFRLRRDEEWETCIPVADCGWKQIAEPVMKLYTETTDGSTIEDKETALVWSYEDA 697 (831)
Q Consensus 618 GR~~~~l~~~~~~~~~~~liaenGa~i~~~~~~~w~~~~~~~~~~w~~~v~~il~~~~e~~~gs~ie~k~~~l~~~~~~~ 697 (831)
||++..+++||+.+++++++||||++++++++..|+......+..|++.+.++++.|.+++||+++|.|+++++|||+++
T Consensus 641 GR~~~~L~~~f~~~~~l~laaEHG~~ir~~~~~~w~~~~~~~~~~w~~~v~~i~~~y~ertpGs~IE~K~~slv~HyR~a 720 (854)
T PLN02205 641 ARSRKTLADWFSPCEKLGIAAEHGYFLRLKRDVEWETCVPVADCSWKQIAEPVMQLYTETTDGSTIEDKETALVWCYEDA 720 (854)
T ss_pred CCCHHHHHHHhCCCCCeEEEEeCCEEEEeCCCceeeecchhhhHHHHHHHHHHHHHHhcCCCchhheecceEEEEehhhC
Confidence 99999999999988779999999999999887789765544467899999999999999999999999999999999999
Q ss_pred CCccchHHHHHHHHHHHhHhcCCCeEEEEcCeEEEEEeCCCCHHHHHHHHHHHhhhcCCCcccEEEEcCCchhHHHHHHc
Q 044635 698 DPDFGSCQAKELLDHLESVLANEPVTVKSGQNLVEVKPQGVNKGLVAKRLLSTMQEREMLPDFVLCVGDDRSDEDMFEVI 777 (831)
Q Consensus 698 d~~~~~~~a~el~~~L~~~l~~~~v~v~~g~~~vEV~p~gvnKG~al~~Ll~~l~~~g~~~d~vla~GD~~NDe~Mf~~a 777 (831)
||+++..+++++..+++..+.+.++.+.+|+.++||+|+++|||.|+++|++.+...|+++++++|||||.|||+||+++
T Consensus 721 dpd~~~~qa~el~~~l~~~l~~~~~~v~~G~~vvEV~p~gvnKG~Al~~Ll~~~~~~g~~~d~vl~~GDD~nDedMF~~~ 800 (854)
T PLN02205 721 DPDFGSCQAKELLDHLESVLANEPVTVKSGQNIVEVKPQGVSKGLVAKRLLSIMQERGMLPDFVLCIGDDRSDEDMFEVI 800 (854)
T ss_pred ChHHhhhhhHHHHHHHHHHHhcCceEEEECCcEEEEEeCCCCHHHHHHHHHHHHHhcCCCcccEEEEcCCccHHHHHHHh
Confidence 99999999999999999999888888999999999999999999999999976544588999999999999999999999
Q ss_pred chhcCCCCCCCCCceEEEEeCCCCcccceEeCChhHHHHHHHHHHhhhccC
Q 044635 778 ISSMAGPSIAPRAEVFACTVGRKPSKAKYYLDDTVEIVRLMQGLACVADQM 828 (831)
Q Consensus 778 ~~~~~~~~~~~~~~~~~v~vG~~~s~A~y~l~d~~eV~~~L~~L~~~~~~~ 828 (831)
+....+..+++.+++|+|+||.++|+|+|+|+|+++|+++|+.|++.+.+.
T Consensus 801 ~~~~~g~~~~~~~~~~~v~VG~~~S~A~y~L~d~~eV~~lL~~L~~~~~~~ 851 (854)
T PLN02205 801 TSSMAGPSIAPRAEVFACTVGQKPSKAKYYLDDTAEIVRLMQGLASVSEQI 851 (854)
T ss_pred hhhccCCcccccccceeEEECCCCccCeEecCCHHHHHHHHHHHHhcchhh
Confidence 854444456677788999999999999999999999999999999988764
No 2
>PLN03064 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=100.00 E-value=1.5e-157 Score=1399.11 Aligned_cols=739 Identities=36% Similarity=0.671 Sum_probs=663.2
Q ss_pred CCcEEEEEcCCccceeecCCCCCCeEEeeCCCchHHHhhhccCCCCCCeEEEeccCCcCCcc-hhhhHhHhhccCeeEEE
Q 044635 59 RDRIIIVANQLPIRAQRKSDNSKGWIFSWDENSLLLQLKDGLGDDDIEVIYVGCLKEEIHVN-EQDEVSQILLDTFKCVP 137 (831)
Q Consensus 59 ~~r~iivsnrlP~~~~~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~wvG~~~~~~~~~-~~~~~~~~~~~~~~~~p 137 (831)
+.|+||||||||+.++++++ |+|+++++.|||+++|.+ + +. .+++||||+|..++.+ +++.+... +.+|+|+|
T Consensus 93 ~~rlIiVSNRlPv~~~~~~~--g~~~~~~s~GGLvsaL~~-~-~~-~~~~WVGw~g~~~~~~~~~~~~~~~-l~~~~~~p 166 (934)
T PLN03064 93 RQRLLVVANRLPVSAVRRGE--DSWSLEISAGGLVSALLG-V-KE-FEARWIGWAGVNVPDEVGQKALTKA-LAEKRCIP 166 (934)
T ss_pred CCCEEEEECCCCcceeecCC--CceEEeECCCCcHHHhcc-c-cc-CCeEEEeeCCCCCCCcchhHHHHHH-hccCceEE
Confidence 68999999999999988765 689999999999999975 5 44 7999999999877654 44555444 57899999
Q ss_pred EeCChHhhhhHhhhhhccccccccccCC-CCCCC-CCCccChhhHHHHHHHHHHHHHHHHHHcCCCCCEEEEeCccccch
Q 044635 138 TFLPPDLFSRYYHGFCKQQLWPLFHYML-PLSPD-LGGRFNRSLWQAYVSVNKIFADRIMEVINPEDDFVWVHDYHLMVL 215 (831)
Q Consensus 138 v~l~~~~~~~~y~gf~~~~lWp~~H~~~-~~~~~-~~~~~~~~~w~~Y~~vN~~fa~~i~~~~~~~~d~vwvhDyhL~ll 215 (831)
|||+++++++||+||||++|||+|||+. +..+. ...+|++++|++|++||++||++|+++++| +|+|||||||||+|
T Consensus 167 V~l~~~~~~~~Y~gfcn~~LWPlfHy~~~~~~~~~~~~~~~~~~w~~Y~~vN~~FA~~i~~~~~~-gD~VWVHDYHL~Ll 245 (934)
T PLN03064 167 VFLDEEIVHQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQSQFAAYKKANQMFADVVNEHYEE-GDVVWCHDYHLMFL 245 (934)
T ss_pred EeCCHHHHHHHHHHhhhcccchhhcCcCCCcccccccccccHHHHHHHHHHHHHHHHHHHHhcCC-CCEEEEecchhhHH
Confidence 9999999999999999999999999973 21110 114688899999999999999999999987 49999999999999
Q ss_pred HHHHHhhcCCCeEEEEEeccCCChHHhhcCCChHHHHHHHhcCCeEeecCHHhHHHHHHHHHHHhCCeecccCceeeEEE
Q 044635 216 PTFLRKRFNRVKLGFFLHSPFPSSEIYKTLPIREEILRALLNSDLIGFHTFDYARHFLSCCSRMLGLTYESKRGYIGLEY 295 (831)
Q Consensus 216 p~~lr~~~~~~~i~~flH~PfP~~e~f~~lp~r~eil~~ll~~dligf~t~~~~~~Fl~~~~r~l~~~~~~~~~~~~~~~ 295 (831)
|.|||+++|+++||||||||||++|+|||||+|++||+|||+||+|||||++|++||++||+|+||++... .++.+
T Consensus 246 P~~LR~~~p~~~IGfFlHiPFPs~Eifr~LP~r~elL~glL~aDlIGFqT~~y~rhFl~~c~rlLg~~~~~----~~v~~ 321 (934)
T PLN03064 246 PKCLKEYNSNMKVGWFLHTPFPSSEIHRTLPSRSELLRSVLAADLVGFHTYDYARHFVSACTRILGLEGTP----EGVED 321 (934)
T ss_pred HHHHHHhCCCCcEEEEecCCCCChHHHhhCCcHHHHHHHHhcCCeEEeCCHHHHHHHHHHHHHHhCccccC----CeEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999998543 35899
Q ss_pred cCEEEEEEEeecccChHHHHHhhCCcchHHHHHHHHHHhccCCcEEEEeccCcccccCHHHHHHHHHHHHHhCCCCCCcE
Q 044635 296 YGRTVSIKILPVGIHMGQLQSVLSLPGTEAKVSELIKQFHDQGKVMLLGVDDMDIFKGISLKLLAMEQLLIQHPEWQGKV 375 (831)
Q Consensus 296 ~gr~~~i~v~P~GId~~~~~~~~~~~~~~~~~~~lr~~~~~~~~~iil~VdRld~~KGi~~~l~A~~~lL~~~P~~~~~v 375 (831)
+||.++|.++|+|||++.|...+..+++++.++++++++ .++++||+|||||++|||.++|+||++||++||+|++||
T Consensus 322 ~Gr~v~V~~~PiGID~~~f~~~~~~~~v~~~~~~lr~~~--~g~kiIlgVDRLD~~KGI~~kL~AfE~fL~~~Pe~r~kV 399 (934)
T PLN03064 322 QGRLTRVAAFPIGIDSDRFIRALETPQVQQHIKELKERF--AGRKVMLGVDRLDMIKGIPQKILAFEKFLEENPEWRDKV 399 (934)
T ss_pred CCEEEEEEEEeCEEcHHHHHHHhcChhHHHHHHHHHHHh--CCceEEEEeeccccccCHHHHHHHHHHHHHhCccccCCE
Confidence 999999999999999999999999999999999999999 899999999999999999999999999999999999999
Q ss_pred EEEEEecCCCCCchhHHHHHHHHHHHHHHHhccCCCCCCccEEEecCCCCHHHHHHHHHHcCEeEECCCccCC-------
Q 044635 376 VLVQIANPARGRGKDVKEVQAETYSTVERINQTFGKPGYDPVVLIDEPLKFYERIAYYVVAECCLVTAVRDGS------- 448 (831)
Q Consensus 376 vLvqig~p~r~~~~~~~~l~~~i~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv~vvtS~~eGm------- 448 (831)
+||||++|+|+++++|+++++++.++|++||++||+.+|+||+|+.+.++++|+.++|++|||||+||+||||
T Consensus 400 VLvQIa~psr~~v~eY~~l~~~V~~~V~rIN~~fg~~~w~Pv~~~~~~l~~eeL~AlY~~ADV~lvTslrDGmNLva~Ey 479 (934)
T PLN03064 400 VLLQIAVPTRTDVPEYQKLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFHALCALYAVTDVALVTSLRDGMNLVSYEF 479 (934)
T ss_pred EEEEEcCCCCCCcHHHHHHHHHHHHHHHHHhhhccCCCcceEEEeccCCCHHHHHHHHHhCCEEEeCccccccCchHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred -CCCCCCCceEEEeccccccccc-CCCceeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHhhhhccCCHHHHHHHHHHHH
Q 044635 449 -EPSSPKKSMLVVSEFIGCSPSL-SGAIRVNPWNIDAVSDAMDSALEMADQEKQLRHEKHYRYVSTHDVGYWARSFLQDL 526 (831)
Q Consensus 449 -a~~~~~~g~lVlSe~~G~~~~l-~~allVnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l 526 (831)
+|+..++|+||+|||+||+++| .+|++|||||++++|+||.+||+|+++||+.|+++++++|.+||+.+|+++|+++|
T Consensus 480 va~~~~~~GvLILSEfaGaa~~L~~~AllVNP~D~~~vA~AI~~AL~M~~~Er~~r~~~~~~~V~~~d~~~Wa~~fl~~L 559 (934)
T PLN03064 480 VACQDSKKGVLILSEFAGAAQSLGAGAILVNPWNITEVAASIAQALNMPEEEREKRHRHNFMHVTTHTAQEWAETFVSEL 559 (934)
T ss_pred HHhhcCCCCCeEEeCCCchHHHhCCceEEECCCCHHHHHHHHHHHHhCCHHHHHHHHHHHHhhcccCCHHHHHHHHHHHH
Confidence 4666788999999999999999 58999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhhccccccCcCcceeEeecCcccccCCHHHHHHHHHhcCceeEEecCCCccCCCCCC-----------CCCCC
Q 044635 527 ERTCREHVRQRCWGIGFGLSFRVVALDPNFKKLSMEHIVSAYKRTTTRAILLDYDGTLMPQASI-----------DKSPN 595 (831)
Q Consensus 527 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~f~~l~~~~~~~~y~~s~~rli~~D~DGTLl~~~~~-----------~~~~s 595 (831)
.++..++.. ++. . -+.+|+.+.+.++|+++++|+||+||||||++..+. ...|+
T Consensus 560 ~~~~~~~~~-~~~-----------~---~~~~l~~~~~~~~y~~a~~RLlfLDyDGTLap~~~~P~~~~~~~~~~~a~p~ 624 (934)
T PLN03064 560 NDTVVEAQL-RTR-----------Q---VPPQLPPEDAIQRYLQSNNRLLILGFNATLTEPVDTPGRRGDQIKEMELRLH 624 (934)
T ss_pred HHHHhhhhc-ccc-----------c---cCCCCCHHHHHHHHHhccceEEEEecCceeccCCCCcccccccccccccCCC
Confidence 988654321 111 1 124799999999999999999999999999986432 23478
Q ss_pred HHHHHHHHHHhhcCCCeEEEECCCCHhhHHHHhCCCCCceEEecCCEEEEeCCCceEEE-cCCcCCccHHHHHHHHHHHH
Q 044635 596 SKTIDILNSLCRDKNNMVFLVSAKSRKTLAEWFSPCENLGIAAEHGYFFRLRRDEEWET-CIPVADCGWKQIAEPVMKLY 674 (831)
Q Consensus 596 ~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~~~~~~liaenGa~i~~~~~~~w~~-~~~~~~~~w~~~v~~il~~~ 674 (831)
++++++|++|+++++|.|+|+|||+.+.+++||+.+ +++++||||++++.+ +..|.. .....+..|++.+.++|++|
T Consensus 625 p~l~~~L~~L~~dp~n~VaIVSGR~~~~Le~~fg~~-~L~LaAEHG~~~R~~-~~~w~~~~~~~~~~~W~~~v~~ile~~ 702 (934)
T PLN03064 625 PELKEPLRALCSDPKTTIVVLSGSDRSVLDENFGEF-DMWLAAENGMFLRHT-KGEWMTTMPEHLNMDWVDSVKHVFEYF 702 (934)
T ss_pred HHHHHHHHHHHhCCCCeEEEEeCCCHHHHHHHhCCC-CceEEeeCCeEEecC-CCcceeccccccchHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999987 799999999999876 457874 33334668999999999999
Q ss_pred hccCCCeeEeeccceEEEeeccCCCccchHHHHHHHHHH-HhHhcCCCeEEEEcCeEEEEEeCCCCHHHHHHHHHHHhhh
Q 044635 675 TETTDGSTIEDKETALVWSYEDADPDFGSCQAKELLDHL-ESVLANEPVTVKSGQNLVEVKPQGVNKGLVAKRLLSTMQE 753 (831)
Q Consensus 675 ~e~~~gs~ie~k~~~l~~~~~~~d~~~~~~~a~el~~~L-~~~l~~~~v~v~~g~~~vEV~p~gvnKG~al~~Ll~~l~~ 753 (831)
++++||+++|.|+++++|||+++||+++..|++++.+++ +..+.+.++.+..|+.+|||+|.++|||.|+++|++.+..
T Consensus 703 ~eRtPGS~IE~K~~SLawHYR~ADpe~g~~qA~el~~~L~~~~~~~~~v~V~~Gk~VVEVrP~gvnKG~Av~~ll~~~~~ 782 (934)
T PLN03064 703 TERTPRSHFETRETSLVWNYKYADVEFGRLQARDMLQHLWTGPISNAAVDVVQGSRSVEVRPVGVTKGAAIDRILGEIVH 782 (934)
T ss_pred HhcCCCcEEEEcCcEEEEEecCCChhhHHHHHHHHHHHHHhhhccCCCcEEEeCCeEEEEEcCCCCHHHHHHHHHHhhhh
Confidence 999999999999999999999999999999999999999 4556677899999999999999999999999999997632
Q ss_pred cC---CCcccEEEEcCCch-hHHHHHHcchhcCCC-------------------------------C----------C--
Q 044635 754 RE---MLPDFVLCVGDDRS-DEDMFEVIISSMAGP-------------------------------S----------I-- 786 (831)
Q Consensus 754 ~g---~~~d~vla~GD~~N-De~Mf~~a~~~~~~~-------------------------------~----------~-- 786 (831)
.+ .++|||+|+|||.. ||+||+++..-.... . .
T Consensus 783 ~~~~~~~~DFvlc~GDd~~~DEdmF~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 862 (934)
T PLN03064 783 SKSMTTPIDYVLCIGHFLGKDEDIYTFFEPELPSDSPAIARSRSPDGLKSSGDRRPSGKLPSSRSNSKNSQGKKQRSLLS 862 (934)
T ss_pred ccccCCCCCEEEEeCCCCCCcHHHHHHHhccCCcccccccccccCCcccCCccccccCCCccccccccccccccCCcccc
Confidence 22 36899999999875 999999986521100 0 0
Q ss_pred -------------------C----------CCCceEEEEeCCCCcccceEeCChhHHHHHHHHHHhhhcc
Q 044635 787 -------------------A----------PRAEVFACTVGRKPSKAKYYLDDTVEIVRLMQGLACVADQ 827 (831)
Q Consensus 787 -------------------~----------~~~~~~~v~vG~~~s~A~y~l~d~~eV~~~L~~L~~~~~~ 827 (831)
+ ...+.|+|+||.|.|+|+|++++.+||+.+|+.|++.++.
T Consensus 863 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 932 (934)
T PLN03064 863 SAKSGVNHAASHGSDRRPSPEKIGWSVLDLKGENYFSCAVGRKRSNARYLLGSSDDVVSFLKELANASSS 932 (934)
T ss_pred cccccccccccCCccccCCccccccccccccCcceEEEEeccccccceeecCCHHHHHHHHHHHhccccC
Confidence 0 1234599999999999999999999999999999998765
No 3
>PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=100.00 E-value=6.8e-150 Score=1346.49 Aligned_cols=741 Identities=36% Similarity=0.673 Sum_probs=659.1
Q ss_pred CCCCcEEEEEcCCccceeecCCCCCCeEEeeCCCchHHHhhhccCCCCCCeEEEeccCCcCCcc-hhhhHhHhhccCeeE
Q 044635 57 VQRDRIIIVANQLPIRAQRKSDNSKGWIFSWDENSLLLQLKDGLGDDDIEVIYVGCLKEEIHVN-EQDEVSQILLDTFKC 135 (831)
Q Consensus 57 ~~~~r~iivsnrlP~~~~~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~wvG~~~~~~~~~-~~~~~~~~~~~~~~~ 135 (831)
...+||||||||||+.+.++++ |+|++++++|||+.+|.+ +. . .+++||||+|.+++++ ++..+. ..+.+|+|
T Consensus 8 ~~~~rliiVsnrlp~~~~~~~~--~~~~~~~~~ggl~~al~~-~~-~-~~~~Wvgw~g~~~~~~~~~~~~~-~~~~~~~~ 81 (797)
T PLN03063 8 GERPRLLVVANRLPVSAKRTGE--DSWSLEMSPGGLVSALLG-VK-E-FETKWIGWPGVDVHDEIGKAALT-ESLAEKGC 81 (797)
T ss_pred cCCCCEEEEECCCCccceecCC--CceEEeeCCCCHHHHHHH-HH-h-cCceEEEeCCCcCCcccchhHHH-HHhhcCCe
Confidence 3578999999999999887654 689999999999999985 44 3 6999999999876554 333333 34678999
Q ss_pred EEEeCChHhhhhHhhhhhccccccccccC-CCCCCC-CCCccChhhHHHHHHHHHHHHHHHHHHcCCCCCEEEEeCcccc
Q 044635 136 VPTFLPPDLFSRYYHGFCKQQLWPLFHYM-LPLSPD-LGGRFNRSLWQAYVSVNKIFADRIMEVINPEDDFVWVHDYHLM 213 (831)
Q Consensus 136 ~pv~l~~~~~~~~y~gf~~~~lWp~~H~~-~~~~~~-~~~~~~~~~w~~Y~~vN~~fa~~i~~~~~~~~d~vwvhDyhL~ 213 (831)
+|||| ++++++||+||||++|||+|||+ .+..+. ...+|.++.|++|++||++||++|++.+++ +|+|||||||||
T Consensus 82 ~pv~l-~~~~~~~Y~gf~n~~LWPlfH~~~~~~~~~~~~~~~~~~~w~~Y~~vN~~FA~~i~~~~~~-~d~vWvhDYhL~ 159 (797)
T PLN03063 82 IPVFL-NEVFDQYYNGYCNNILWPIFHYMGLPQEDRHDATRTFESQYDAYKKANRMFLDVVKENYEE-GDVVWCHDYHLM 159 (797)
T ss_pred EEeeh-HHHHHHHHHHHHhhhcchhhcCcCCCcccccccccccHHHHHHHHHHHHHHHHHHHHhcCC-CCEEEEecchhh
Confidence 99999 99999999999999999999998 232222 114566789999999999999999999987 499999999999
Q ss_pred chHHHHHhhcCCCeEEEEEeccCCChHHhhcCCChHHHHHHHhcCCeEeecCHHhHHHHHHHHHHHhCCeecccCceeeE
Q 044635 214 VLPTFLRKRFNRVKLGFFLHSPFPSSEIYKTLPIREEILRALLNSDLIGFHTFDYARHFLSCCSRMLGLTYESKRGYIGL 293 (831)
Q Consensus 214 llp~~lr~~~~~~~i~~flH~PfP~~e~f~~lp~r~eil~~ll~~dligf~t~~~~~~Fl~~~~r~l~~~~~~~~~~~~~ 293 (831)
+||+|||+++|+++||||||||||++|+||+||+|++||+|||+||+|||||++|++||+++|+|++|++.... .+
T Consensus 160 llp~~lR~~~~~~~igfFlHiPFPs~e~fr~lp~r~~il~gll~aDligF~t~~y~r~Fl~~~~r~l~~~~~~~----~i 235 (797)
T PLN03063 160 FLPQYLKEYNNKMKVGWFLHTPFPSSEIYKTLPSRSELLRAVLTADLIGFHTYDFARHFLSACTRILGVEGTHE----GV 235 (797)
T ss_pred hHHHHHHHhCCCCcEEEEecCCCCCHHHHhhCCCHHHHHHHHhcCCEEEeCCHHHHHHHHHHHHHHhCccccCC----ce
Confidence 99999999999999999999999999999999999999999999999999999999999999999999875432 47
Q ss_pred EEcCEEEEEEEeecccChHHHHHhhCCcchHHHHHHHHHHhccCCcEEEEeccCcccccCHHHHHHHHHHHHHhCCCCCC
Q 044635 294 EYYGRTVSIKILPVGIHMGQLQSVLSLPGTEAKVSELIKQFHDQGKVMLLGVDDMDIFKGISLKLLAMEQLLIQHPEWQG 373 (831)
Q Consensus 294 ~~~gr~~~i~v~P~GId~~~~~~~~~~~~~~~~~~~lr~~~~~~~~~iil~VdRld~~KGi~~~l~A~~~lL~~~P~~~~ 373 (831)
.++|+.++|.++|+|||++.|.+....+.+.....++++++ .++++|++|||||+.|||..+|+||++||+++|++++
T Consensus 236 ~~~gr~~~I~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~--~~~~lIl~VgRLd~~KGi~~lL~Afe~lL~~~P~~~~ 313 (797)
T PLN03063 236 VDQGKVTRVAVFPIGIDPERFINTCELPEVKQHMKELKRFF--AGRKVILGVDRLDMIKGIPQKYLAFEKFLEENPEWRD 313 (797)
T ss_pred EECCeEEEEEEEecccCHHHHHHHhcChhHHHHHHHHHHhc--CCCeEEEEecccccccCHHHHHHHHHHHHHhCccccC
Confidence 89999999999999999999988777777777788889888 7899999999999999999999999999999999999
Q ss_pred cEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhccCCCCCCccEEEecCCCCHHHHHHHHHHcCEeEECCCccCC-----
Q 044635 374 KVVLVQIANPARGRGKDVKEVQAETYSTVERINQTFGKPGYDPVVLIDEPLKFYERIAYYVVAECCLVTAVRDGS----- 448 (831)
Q Consensus 374 ~vvLvqig~p~r~~~~~~~~l~~~i~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv~vvtS~~eGm----- 448 (831)
+++||||+.|+|+++++|+++++++.+++++||++||+.+|.||+++.+.++.+++.++|++|||||+||++|||
T Consensus 314 kvvLvqia~psr~~~~~y~~l~~~v~~l~g~In~~~g~~~~~pv~~l~~~v~~~el~aly~~ADvfvvtSlrEGmnLv~l 393 (797)
T PLN03063 314 KVMLVQIAVPTRNDVPEYQKLKSQVHELVGRINGRFGSVSSVPIHHLDCSVDFNYLCALYAITDVMLVTSLRDGMNLVSY 393 (797)
T ss_pred cEEEEEEecCCCCchHHHHHHHHHHHHHHHHhhcccccCCCceeEEecCCCCHHHHHHHHHhCCEEEeCccccccCcchh
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ---CCCCCCCceEEEeccccccccc-CCCceeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHhhhhccCCHHHHHHHHHH
Q 044635 449 ---EPSSPKKSMLVVSEFIGCSPSL-SGAIRVNPWNIDAVSDAMDSALEMADQEKQLRHEKHYRYVSTHDVGYWARSFLQ 524 (831)
Q Consensus 449 ---a~~~~~~g~lVlSe~~G~~~~l-~~allVnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~~l~ 524 (831)
+|..+..|++|+|||+|+++++ .+|++|||||++++|+||.++|+|+++||+.|+++++++|.+||+.+|+++|++
T Consensus 394 EamA~g~p~~gvlVlSe~~G~~~~l~~~allVnP~D~~~lA~AI~~aL~m~~~er~~r~~~~~~~v~~~~~~~Wa~~fl~ 473 (797)
T PLN03063 394 EFVACQKAKKGVLVLSEFAGAGQSLGAGALLVNPWNITEVSSAIKEALNMSDEERETRHRHNFQYVKTHSAQKWADDFMS 473 (797)
T ss_pred hHheeecCCCCCEEeeCCcCchhhhcCCeEEECCCCHHHHHHHHHHHHhCCHHHHHHHHHHHHHhhhhCCHHHHHHHHHH
Confidence 4555678899999999999999 589999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhhccccccCcCcceeEeecCcccccCCHHHHHHHHHhcCceeEEecCCCccCCCCC-----CCCCCCHHHH
Q 044635 525 DLERTCREHVRQRCWGIGFGLSFRVVALDPNFKKLSMEHIVSAYKRTTTRAILLDYDGTLMPQAS-----IDKSPNSKTI 599 (831)
Q Consensus 525 ~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~f~~l~~~~~~~~y~~s~~rli~~D~DGTLl~~~~-----~~~~~s~~~~ 599 (831)
+|.++++.+..+. ...+.+|+.+.+.++|+++++|+||+||||||++..+ ....|+++++
T Consensus 474 ~l~~~~~~~~~~~---------------~~~~~~l~~~~~~~~y~~a~~rll~LDyDGTL~~~~~~~~~p~~a~p~~~l~ 538 (797)
T PLN03063 474 ELNDIIVEAELRT---------------RNIPLELPEQDVIQQYSKSNNRLLILGFYGTLTEPRNSQIKEMDLGLHPELK 538 (797)
T ss_pred HHHHHhhhhhhcc---------------cCCCCCCCHHHHHHHHHhccCeEEEEecCccccCCCCCccccccCCCCHHHH
Confidence 9999887643211 1234579999999999999999999999999998643 2245899999
Q ss_pred HHHHHHhhcCCCeEEEECCCCHhhHHHHhCCCCCceEEecCCEEEEeCCCceEEEcC-CcCCccHHHHHHHHHHHHhccC
Q 044635 600 DILNSLCRDKNNMVFLVSAKSRKTLAEWFSPCENLGIAAEHGYFFRLRRDEEWETCI-PVADCGWKQIAEPVMKLYTETT 678 (831)
Q Consensus 600 ~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~~~~~~liaenGa~i~~~~~~~w~~~~-~~~~~~w~~~v~~il~~~~e~~ 678 (831)
++|++|+++++|.|+|+|||+.+.+++|++.+ +++++||||++++.+ +..|.... ...+..|++.+.++|++|++++
T Consensus 539 ~~L~~L~~d~~~~V~IvSGR~~~~L~~~~~~~-~l~l~aeHG~~~r~~-~~~w~~~~~~~~~~~w~~~v~~~l~~~~~rt 616 (797)
T PLN03063 539 ETLKALCSDPKTTVVVLSRSGKDILDKNFGEY-NIWLAAENGMFLRHT-SGEWVTTMPEHMNLDWVDGVKNVFKYFTDRT 616 (797)
T ss_pred HHHHHHHcCCCCEEEEEeCCCHHHHHHHhCCC-CCcEEEeCCEEEecC-CCceeeccccccChhHHHHHHHHHHHHHHhC
Confidence 99999999999999999999999999999875 799999999999876 45787543 2335789999999999999999
Q ss_pred CCeeEeeccceEEEeeccCCCccchHHHHHHHHHHH-hHhcCCCeEEEEcCeEEEEEeCCCCHHHHHHHHHHHhhhc---
Q 044635 679 DGSTIEDKETALVWSYEDADPDFGSCQAKELLDHLE-SVLANEPVTVKSGQNLVEVKPQGVNKGLVAKRLLSTMQER--- 754 (831)
Q Consensus 679 ~gs~ie~k~~~l~~~~~~~d~~~~~~~a~el~~~L~-~~l~~~~v~v~~g~~~vEV~p~gvnKG~al~~Ll~~l~~~--- 754 (831)
||+++|.|+++++|||+++||+++..++.++.+++. ..+.+.++.+..|+.+|||+|+++|||.|+++|++.+...
T Consensus 617 pGs~iE~K~~sla~HyR~adp~~g~~~a~el~~~l~~~~~~~~~~~v~~Gk~vvEvrp~gvnKG~Av~~ll~~~~~~~~~ 696 (797)
T PLN03063 617 PRSYVEKSETSLVWNYEYADVEFGRAQARDMLQHLWAGPISNASVDVVRGQKSVEVHAIGVTKGAAIGRILGEIVHNKSM 696 (797)
T ss_pred CCcEEEEcCeEEEEEcCCCChHHHHHHHHHHHHHHHHhhccCCCcEEEECCeEEEEEcCCCChHHHHHHHHHHhhhcccc
Confidence 999999999999999999999999999999999984 4556678999999999999999999999999999976321
Q ss_pred CCCcccEEEEcCCc-hhHHHHHHcchhcCC--------C-----------CCCCCCceEEEEeCCCCcccceEeCChhHH
Q 044635 755 EMLPDFVLCVGDDR-SDEDMFEVIISSMAG--------P-----------SIAPRAEVFACTVGRKPSKAKYYLDDTVEI 814 (831)
Q Consensus 755 g~~~d~vla~GD~~-NDe~Mf~~a~~~~~~--------~-----------~~~~~~~~~~v~vG~~~s~A~y~l~d~~eV 814 (831)
+..+|||+|+||+. .||+||+++...... . .....+++|+|+||.++|+|+|||+|++||
T Consensus 697 ~~~~dfvl~~Gdd~~~DEdmF~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~VG~~~s~A~y~l~~~~eV 776 (797)
T PLN03063 697 TTPIDFVFCSGYFLEKDEDVYTFFEPEILSKKKSSSSNYSDSDKKVSSNLVDLKGENYFSCAIGQARTKARYVLDSSNDV 776 (797)
T ss_pred CCCCCEEEEeCCCCCCcHHHHHhccccccccccccccccccccccccccccccccCceEEEEECCCCccCeecCCCHHHH
Confidence 23679999999984 699999998742100 0 012356789999999999999999999999
Q ss_pred HHHHHHHHhhhccC
Q 044635 815 VRLMQGLACVADQM 828 (831)
Q Consensus 815 ~~~L~~L~~~~~~~ 828 (831)
+++|+.|++...+.
T Consensus 777 ~~lL~~l~~~~~~~ 790 (797)
T PLN03063 777 VSLLHKLAVANTTM 790 (797)
T ss_pred HHHHHHHhccCccc
Confidence 99999999876553
No 4
>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional
Probab=100.00 E-value=1.1e-140 Score=1271.01 Aligned_cols=712 Identities=37% Similarity=0.669 Sum_probs=649.0
Q ss_pred CcEEEEEcCCccceeecCCCCCCeEEeeCCCchHHHhhhccCCCCCCeEEEeccCCcCCc---chhhhHhHhhccCeeEE
Q 044635 60 DRIIIVANQLPIRAQRKSDNSKGWIFSWDENSLLLQLKDGLGDDDIEVIYVGCLKEEIHV---NEQDEVSQILLDTFKCV 136 (831)
Q Consensus 60 ~r~iivsnrlP~~~~~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~wvG~~~~~~~~---~~~~~~~~~~~~~~~~~ 136 (831)
+||||||||||+.+.+++ |+|++++++|||+.+|.+.+.+ .+++||||+|.+.+. .++.++. ..+.+|+|+
T Consensus 1 ~~livvsnr~p~~~~~~~---~~~~~~~~~ggl~~~l~~~~~~--~~~~wvg~~g~~~~~~~~~~~~~~~-~~~~~~~~~ 74 (726)
T PRK14501 1 SRLIIVSNRLPVTVVRED---GGVELTPSVGGLATGLRSFHER--GGGLWVGWPGLDLEEESEEQRARIE-PRLEELGLV 74 (726)
T ss_pred CCEEEEEcCCCcceeecC---CceEEeeCCCchHHHHHHHhhc--CCeEEEEeCCCCccccchhhhhhhh-hhccCceEE
Confidence 489999999999988764 5899999999999999876654 689999999976543 2223333 446789999
Q ss_pred EEeCChHhhhhHhhhhhccccccccccCCCCCCCCCCccChhhHHHHHHHHHHHHHHHHHHcCCCCCEEEEeCccccchH
Q 044635 137 PTFLPPDLFSRYYHGFCKQQLWPLFHYMLPLSPDLGGRFNRSLWQAYVSVNKIFADRIMEVINPEDDFVWVHDYHLMVLP 216 (831)
Q Consensus 137 pv~l~~~~~~~~y~gf~~~~lWp~~H~~~~~~~~~~~~~~~~~w~~Y~~vN~~fa~~i~~~~~~~~d~vwvhDyhL~llp 216 (831)
||||++++++.||+||||++|||+|||+++. ..|++++|++|++||++||++|++.++++ |+|||||||||+||
T Consensus 75 ~v~l~~~~~~~~y~gf~n~~lWp~~H~~~~~-----~~~~~~~w~~Y~~vN~~fA~~~~~~~~~~-d~vwvhDYhl~l~p 148 (726)
T PRK14501 75 PVFLSAEEVDRYYEGFCNSTLWPLFHYFPEY-----TEFEDRFWESYERVNQRFAEAIAAIARPG-DVVWVHDYQLMLLP 148 (726)
T ss_pred EEeCCHHHHHHHHHHhhhccccchhcccCcc-----cCcCHHHHHHHHHHHHHHHHHHHHhcCCC-CEEEEeCchhhhHH
Confidence 9999999999999999999999999999865 47999999999999999999999999974 99999999999999
Q ss_pred HHHHhhcCCCeEEEEEeccCCChHHhhcCCChHHHHHHHhcCCeEeecCHHhHHHHHHHHHHHhCCeecccCceeeEEEc
Q 044635 217 TFLRKRFNRVKLGFFLHSPFPSSEIYKTLPIREEILRALLNSDLIGFHTFDYARHFLSCCSRMLGLTYESKRGYIGLEYY 296 (831)
Q Consensus 217 ~~lr~~~~~~~i~~flH~PfP~~e~f~~lp~r~eil~~ll~~dligf~t~~~~~~Fl~~~~r~l~~~~~~~~~~~~~~~~ 296 (831)
++||+++|+++||||||||||++|+|++||+|++||+|||+||+|||||++|++||++||+|+++++... .+++++
T Consensus 149 ~~lr~~~~~~~igfFlH~pfP~~~~f~~lp~~~~ll~~ll~~Dligf~t~~~~r~Fl~~~~~~l~~~~~~----~~~~~~ 224 (726)
T PRK14501 149 AMLRERLPDARIGFFLHIPFPSFEVFRLLPWREEILEGLLGADLIGFHTYDYVRHFLSSVLRVLGYETEL----GEIRLG 224 (726)
T ss_pred HHHHhhCCCCcEEEEeeCCCCChHHHhhCCChHHHHHHHhcCCeEEeCCHHHHHHHHHHHHHHcCCccCC----CeEEEC
Confidence 9999999999999999999999999999999999999999999999999999999999999999987532 258899
Q ss_pred CEEEEEEEeecccChHHHHHhhCCcchHHHHHHHHHHhccCCcEEEEeccCcccccCHHHHHHHHHHHHHhCCCCCCcEE
Q 044635 297 GRTVSIKILPVGIHMGQLQSVLSLPGTEAKVSELIKQFHDQGKVMLLGVDDMDIFKGISLKLLAMEQLLIQHPEWQGKVV 376 (831)
Q Consensus 297 gr~~~i~v~P~GId~~~~~~~~~~~~~~~~~~~lr~~~~~~~~~iil~VdRld~~KGi~~~l~A~~~lL~~~P~~~~~vv 376 (831)
|+.++|.++|+|||++.|.+....+.+....+++++.+ .++++|++|||+++.||+..+|+||++|++++|+++|+++
T Consensus 225 gr~~~v~v~p~GID~~~f~~~~~~~~~~~~~~~lr~~~--~~~~~il~VgRl~~~Kgi~~~l~A~~~ll~~~p~~~~~v~ 302 (726)
T PRK14501 225 GRIVRVDAFPMGIDYDKFHNSAQDPEVQEEIRRLRQDL--RGRKIILSIDRLDYTKGIPRRLLAFERFLEKNPEWRGKVR 302 (726)
T ss_pred CEEEEEEEEECeEcHHHHHHHhcCchHHHHHHHHHHHc--CCCEEEEEecCcccccCHHHHHHHHHHHHHhCccccCCEE
Confidence 99999999999999999998887777777788888888 8899999999999999999999999999999999999999
Q ss_pred EEEEecCCCCCchhHHHHHHHHHHHHHHHhccCCCCCCccEEEecCCCCHHHHHHHHHHcCEeEECCCccCC--------
Q 044635 377 LVQIANPARGRGKDVKEVQAETYSTVERINQTFGKPGYDPVVLIDEPLKFYERIAYYVVAECCLVTAVRDGS-------- 448 (831)
Q Consensus 377 Lvqig~p~r~~~~~~~~l~~~i~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv~vvtS~~eGm-------- 448 (831)
|+||+.|+|.+.++|+++++++.+++++||++||+.+|+||+++.+.++++|+.++|++|||||+||++|||
T Consensus 303 lv~v~~~sr~~~~~~~~l~~~~~~~v~~in~~~~~~~~~pv~~~~~~~~~~~l~~ly~~aDv~v~~S~~EG~~lv~~Eam 382 (726)
T PRK14501 303 LVQVAVPSRTGVPQYQEMKREIDELVGRINGEFGTVDWTPIHYFYRSLPFEELVALYRAADVALVTPLRDGMNLVAKEYV 382 (726)
T ss_pred EEEEecCCCcchHHHHHHHHHHHHHHHHHHhhcCCCCcceEEEEeCCCCHHHHHHHHHhccEEEecccccccCcccceEE
Confidence 999999999888999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCceEEEecccccccccCCCceeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHhhhhccCCHHHHHHHHHHHHHH
Q 044635 449 EPSSPKKSMLVVSEFIGCSPSLSGAIRVNPWNIDAVSDAMDSALEMADQEKQLRHEKHYRYVSTHDVGYWARSFLQDLER 528 (831)
Q Consensus 449 a~~~~~~g~lVlSe~~G~~~~l~~allVnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l~~ 528 (831)
+|..+..|++|+|+++|+++++.+|++|||||++++|+||.++|+|+.+|++.|++++++++.++|+.+|+++|++++.+
T Consensus 383 a~~~~~~g~~vls~~~G~~~~l~~~llv~P~d~~~la~ai~~~l~~~~~e~~~r~~~~~~~v~~~~~~~w~~~~l~~l~~ 462 (726)
T PRK14501 383 ASRTDGDGVLILSEMAGAAAELAEALLVNPNDIEGIAAAIKRALEMPEEEQRERMQAMQERLRRYDVHKWASDFLDELRE 462 (726)
T ss_pred EEcCCCCceEEEecccchhHHhCcCeEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 34445568999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhhccccccCcCcceeEeecCcccccCCHHHHHHHHHhcCceeEEecCCCccCCCCC--CCCCCCHHHHHHHHHHh
Q 044635 529 TCREHVRQRCWGIGFGLSFRVVALDPNFKKLSMEHIVSAYKRTTTRAILLDYDGTLMPQAS--IDKSPNSKTIDILNSLC 606 (831)
Q Consensus 529 ~~~~~~~~~~~~~~~g~~~~~~~~~~~f~~l~~~~~~~~y~~s~~rli~~D~DGTLl~~~~--~~~~~s~~~~~~L~~L~ 606 (831)
+++++.... +..++.++.+.+.++|+.+++|+|++||||||++... ....++++++++|++|+
T Consensus 463 ~~~~~~~~~---------------~~~~~~~~~~~~~~~y~~~~~rLi~~D~DGTL~~~~~~~~~~~~~~~~~~~L~~L~ 527 (726)
T PRK14501 463 AAEKNKAFA---------------SKPITPAAAEEIIARYRAASRRLLLLDYDGTLVPFAPDPELAVPDKELRDLLRRLA 527 (726)
T ss_pred HHhhhhccc---------------cccCCccCHHHHHHHHHhccceEEEEecCccccCCCCCcccCCCCHHHHHHHHHHH
Confidence 887653211 1235678999999999999999999999999998532 23568999999999999
Q ss_pred hcCCCeEEEECCCCHhhHHHHhCCCCCceEEecCCEEEEeCCCceEEEcCCcCCccHHHHHHHHHHHHhccCCCeeEeec
Q 044635 607 RDKNNMVFLVSAKSRKTLAEWFSPCENLGIAAEHGYFFRLRRDEEWETCIPVADCGWKQIAEPVMKLYTETTDGSTIEDK 686 (831)
Q Consensus 607 ~d~g~~V~I~SGR~~~~l~~~~~~~~~~~liaenGa~i~~~~~~~w~~~~~~~~~~w~~~v~~il~~~~e~~~gs~ie~k 686 (831)
+++|+.|+|+|||++..++++++.+ ++++|++||++++.+ ++.|..... .+..|++.+.++++.|.++++|+++|.|
T Consensus 528 ~d~g~~V~ivSGR~~~~l~~~~~~~-~l~liaenG~~i~~~-~~~w~~~~~-~~~~w~~~v~~il~~~~~~~~gs~ie~k 604 (726)
T PRK14501 528 ADPNTDVAIISGRDRDTLERWFGDL-PIHLVAEHGAWSRAP-GGEWQLLEP-VATEWKDAVRPILEEFVDRTPGSFIEEK 604 (726)
T ss_pred cCCCCeEEEEeCCCHHHHHHHhCCC-CeEEEEeCCEEEeCC-CCceEECCC-cchhHHHHHHHHHHHHHhcCCCcEEEEc
Confidence 9889999999999999999999876 589999999999865 457875433 4678999999999999999999999999
Q ss_pred cceEEEeeccCCCccchHHHHHHHHHHHhHhcCCCeEEEEcCeEEEEEeCCCCHHHHHHHHHHHhhhcCCCcccEEEEcC
Q 044635 687 ETALVWSYEDADPDFGSCQAKELLDHLESVLANEPVTVKSGQNLVEVKPQGVNKGLVAKRLLSTMQEREMLPDFVLCVGD 766 (831)
Q Consensus 687 ~~~l~~~~~~~d~~~~~~~a~el~~~L~~~l~~~~v~v~~g~~~vEV~p~gvnKG~al~~Ll~~l~~~g~~~d~vla~GD 766 (831)
+.+++|||+++|++++..+++++.++++..+.+.++.+.+|+.++||+|+++|||.|++++++ ++++++++||||
T Consensus 605 ~~~l~~~~r~~d~~~~~~~a~~l~~~l~~~~~~~~~~v~~g~~~veV~p~~vnKG~al~~ll~-----~~~~d~vl~~GD 679 (726)
T PRK14501 605 EASLAWHYRNADPELGEARANELILALSSLLSNAPLEVLRGNKVVEVRPAGVNKGRAVRRLLE-----AGPYDFVLAIGD 679 (726)
T ss_pred ceEEEEEccCCCHHHHHHHHHHHHHHHHHHhcCCCeEEEECCeEEEEEECCCCHHHHHHHHHh-----cCCCCEEEEECC
Confidence 999999999999999988899999999998888888899999999999999999999999998 467899999999
Q ss_pred CchhHHHHHHcchhcCCCCCCCCCceEEEEeCCCCcccceEeCChhHHHHHHHHHHh
Q 044635 767 DRSDEDMFEVIISSMAGPSIAPRAEVFACTVGRKPSKAKYYLDDTVEIVRLMQGLAC 823 (831)
Q Consensus 767 ~~NDe~Mf~~a~~~~~~~~~~~~~~~~~v~vG~~~s~A~y~l~d~~eV~~~L~~L~~ 823 (831)
|.||++||+.++. ..++|+||++++.|+|+++++++|+++|+.|++
T Consensus 680 ~~nDe~Mf~~~~~-----------~~~~v~vG~~~s~A~~~l~~~~eV~~~L~~l~~ 725 (726)
T PRK14501 680 DTTDEDMFRALPE-----------TAITVKVGPGESRARYRLPSQREVRELLRRLLD 725 (726)
T ss_pred CCChHHHHHhccc-----------CceEEEECCCCCcceEeCCCHHHHHHHHHHHhc
Confidence 9999999999752 138999999999999999999999999999985
No 5
>KOG1050 consensus Trehalose-6-phosphate synthase component TPS1 and related subunits [Carbohydrate transport and metabolism]
Probab=100.00 E-value=5.6e-130 Score=1136.30 Aligned_cols=720 Identities=55% Similarity=0.964 Sum_probs=676.3
Q ss_pred CCcEEEEEcCCccceeecCCCCCCeEEeeCCCchHHHhhhccCCCCCCeEEEeccCCcCCcchhhhHhHhhccCeeEEEE
Q 044635 59 RDRIIIVANQLPIRAQRKSDNSKGWIFSWDENSLLLQLKDGLGDDDIEVIYVGCLKEEIHVNEQDEVSQILLDTFKCVPT 138 (831)
Q Consensus 59 ~~r~iivsnrlP~~~~~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~wvG~~~~~~~~~~~~~~~~~~~~~~~~~pv 138 (831)
..|+|+|||+||+.+.++.++ +.|.|+++.+||+.++..++.+ ++..||||++.++++++++.+.+.++..++|+||
T Consensus 2 ~~r~i~vsn~lp~~~~~~~~~-~~~~~~~~~~~l~~~l~~~~~~--~~~~~vg~~~~~~~~~~~~~~~~~~~~~~~~~pv 78 (732)
T KOG1050|consen 2 RPRIIVVSNRLPLKASKRTDT-GKWSFSFSPGSLVSQLKGIFRE--MEVKWVGPLGDELDDSEKEDVSQELLEEFDSVPV 78 (732)
T ss_pred CceEEEEEccCceecccccCC-CceeeecCCCCchhhhhccccc--ceeeEEeeccccCchhhHhHhhhhhhhhcCceee
Confidence 469999999999998655555 7999999999999999887764 7999999999889999999999999999999999
Q ss_pred eCChHhhhhHhhhhhccccccccccC-CCCCCCCCCccChhhHHHHHHHHHHHHHHHHHHcCCCCCEEEEeCccccchHH
Q 044635 139 FLPPDLFSRYYHGFCKQQLWPLFHYM-LPLSPDLGGRFNRSLWQAYVSVNKIFADRIMEVINPEDDFVWVHDYHLMVLPT 217 (831)
Q Consensus 139 ~l~~~~~~~~y~gf~~~~lWp~~H~~-~~~~~~~~~~~~~~~w~~Y~~vN~~fa~~i~~~~~~~~d~vwvhDyhL~llp~ 217 (831)
+++++...++|+||||++|||+|||+ .+..+.+. .|+.+.|++|+++|+.||++|++.++ ++|+|||||||||++|+
T Consensus 79 ~~~~~~~~~~y~~~~~~ilwP~~hy~~~p~~~~~~-~~~~~~w~~y~~~n~~f~d~ive~~~-~~d~vwihdyhlmllp~ 156 (732)
T KOG1050|consen 79 FLDDELFDSYYNGYCKSILWPLFHYMLIPSEPAFK-LFDLELWKAYVKVNQAFADKIVEVYE-EGDIVWIHDYHLMLLPQ 156 (732)
T ss_pred ecCCchhhhhhhhhhhhcccceeecccCCCchhhh-hhHHHHHHHHHHHhHHHHHHHHHhcc-CCCcEEEEcchhhccch
Confidence 99999999999999999999999999 66666654 78899999999999999999999999 57999999999999999
Q ss_pred HHHhhcCCCeEEEEEeccCCChHHhhcCCChHHHHHHHhcCCeEeecCHHhHHHHHHHHHHHhCCeecccCceeeEEEcC
Q 044635 218 FLRKRFNRVKLGFFLHSPFPSSEIYKTLPIREEILRALLNSDLIGFHTFDYARHFLSCCSRMLGLTYESKRGYIGLEYYG 297 (831)
Q Consensus 218 ~lr~~~~~~~i~~flH~PfP~~e~f~~lp~r~eil~~ll~~dligf~t~~~~~~Fl~~~~r~l~~~~~~~~~~~~~~~~g 297 (831)
|+|++.++++||||+|+|||++|+|+|+|.|+|||+||++||+|||||++|+|||++||.|++++++.+.++..++.+.|
T Consensus 157 ~lr~~~~~~~ig~flhspfpssEi~r~lp~r~eIl~gll~~~~i~f~t~d~arhFls~c~R~l~~~~~s~~~~~~v~~rg 236 (732)
T KOG1050|consen 157 MLRERFNSAKIGFFLHSPFPSSEIYRCLPVRKEILRGLLYDDLLGFHTDDYARHFLSTCSRLLGLEVASKFPTAGVSGRG 236 (732)
T ss_pred hhhcccccceEEEeccCCCChHHHHHhcccHHHHHHhhhccCccccccccHHHHHHHHHHHHHHhhhhccCCcceEEecc
Confidence 99999999999999999999999999999999999999999999999999999999999999999998888888899999
Q ss_pred EEEEEEEeecccChHHHHHhhCCcchHHHHHHHHHHhccCCcEEEEeccCcccccCHHHHHHHHHHHHHhCCCCCCcEEE
Q 044635 298 RTVSIKILPVGIHMGQLQSVLSLPGTEAKVSELIKQFHDQGKVMLLGVDDMDIFKGISLKLLAMEQLLIQHPEWQGKVVL 377 (831)
Q Consensus 298 r~~~i~v~P~GId~~~~~~~~~~~~~~~~~~~lr~~~~~~~~~iil~VdRld~~KGi~~~l~A~~~lL~~~P~~~~~vvL 377 (831)
|.+.|.+.|+|||+.+|......+.+..+..+++..+ +|+++|++|||+|+.||+..++.||+++|++||+|+++|+|
T Consensus 237 r~~~v~~~pigid~~r~v~~~~~~~~~~~~~ei~~~~--~g~klilgvD~~d~~kg~~~Kl~a~e~~L~~~pe~~~kVvl 314 (732)
T KOG1050|consen 237 RDVSVKALPIGIDVQRFVKLLELPYVGSKGMEIKEPF--KGKKLILGVDRLDSIKGIQLKLLAFEQFLEEYPEWIDKVVL 314 (732)
T ss_pred ceeeeeecccccchHHhhccccchhHHHHHHHHhhhc--cCCceEecccccccccCchHHHHHHHHHHHhChhhhceEEE
Confidence 9999999999999999999999999999999999999 89999999999999999999999999999999999999999
Q ss_pred EEEecCCCCCchhHHHHHHHHHHHHHHHhccCCCCCCccEEEecCCCCHHHHHHHHHHcCEeEECCCccCCC--------
Q 044635 378 VQIANPARGRGKDVKEVQAETYSTVERINQTFGKPGYDPVVLIDEPLKFYERIAYYVVAECCLVTAVRDGSE-------- 449 (831)
Q Consensus 378 vqig~p~r~~~~~~~~l~~~i~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv~vvtS~~eGma-------- 449 (831)
+||++|+++++++|++++.++..++.+||++||+..++||+++...++..++.++|.+||+|++++++||||
T Consensus 315 iqi~~~~~~~~~~v~~~k~~v~~~v~rIn~~f~~~~~~pV~~~~~~~~~~~l~a~~~Vaev~~v~s~rdGmnl~~~e~i~ 394 (732)
T KOG1050|consen 315 IQIENPKRTDGKEVEELKFCVSVHVRRINEKFGSASYQPVHSLLKDLPFLELLALYKVAEVCPVTSWRDGMNLVFLEYIL 394 (732)
T ss_pred EEEecCCcccchHHHHHHHHhHhhhhhhhhccCCcccceEEEeeccCCHHHHhhhHHhhhheeecccccccchhhhHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999999999999994
Q ss_pred CCCCCCceEEEeccccccccc-CCCceeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHhhhhccCCHHHHHHHHHHHHHH
Q 044635 450 PSSPKKSMLVVSEFIGCSPSL-SGAIRVNPWNIDAVSDAMDSALEMADQEKQLRHEKHYRYVSTHDVGYWARSFLQDLER 528 (831)
Q Consensus 450 ~~~~~~g~lVlSe~~G~~~~l-~~allVnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l~~ 528 (831)
|...+.+++|+|||+||++.+ ++++++||||.+++|.+|..||+|+++|+..|+.++++++..|++..|+.+|++.+
T Consensus 395 ~~~~~~~~lVlsef~G~~~tl~d~aivvnpw~~~~~~~~i~~al~~s~~e~~~r~~~~~~~v~~~~~~~W~~~~~~~l-- 472 (732)
T KOG1050|consen 395 CQENKKSVLVLSEFIGDDTTLEDAAIVVNPWDGDEFAILISKALTMSDEERELREPKHYKYVSTHDVVYWAKSFLQGL-- 472 (732)
T ss_pred hhcccCCceEEeeeccccccccccCEEECCcchHHHHHHHHHHhhcCHHHHhhcchhhhhhhcchhHHHHHHHHHHhh--
Confidence 455667999999999999999 89999999999999999999999999999999999999999999999999999944
Q ss_pred HHHHhhhccccccCcCcceeEeecCcccccCCHHHHHHHHHhcCceeEEecCCCccCCCCCCCCCCCHHHHHHHHHHhhc
Q 044635 529 TCREHVRQRCWGIGFGLSFRVVALDPNFKKLSMEHIVSAYKRTTTRAILLDYDGTLMPQASIDKSPNSKTIDILNSLCRD 608 (831)
Q Consensus 529 ~~~~~~~~~~~~~~~g~~~~~~~~~~~f~~l~~~~~~~~y~~s~~rli~~D~DGTLl~~~~~~~~~s~~~~~~L~~L~~d 608 (831)
++||+.|+ +.+++..+ |+.+.+++.|+++++|+|++|||||+++..+.. +...|+.||.|
T Consensus 473 -------~~~~~~~~-~~~~~~~~------l~~~~~i~~y~~s~~rli~ldyd~t~~~~~~~~------~~~~l~~L~~d 532 (732)
T KOG1050|consen 473 -------KRIWKVGF-LGFRVTPL------LTAEHIVSDYKKSKKRLILLDYDLTLIPPRSIK------AISILKDLCSD 532 (732)
T ss_pred -------hhhhhhcc-cccccccc------cChhHhhhhhhhccceEEEecccccccCCCCch------HHHHHHHHhcC
Confidence 45677788 78887665 889999999999999999999999999844322 99999999999
Q ss_pred CCCeEEEECCCCHhhHHHHhCCCCCceEEecCCEEEEeCCCceEEEcCCcCCccHHHHHHHHHHHHhccCCCeeEeeccc
Q 044635 609 KNNMVFLVSAKSRKTLAEWFSPCENLGIAAEHGYFFRLRRDEEWETCIPVADCGWKQIAEPVMKLYTETTDGSTIEDKET 688 (831)
Q Consensus 609 ~g~~V~I~SGR~~~~l~~~~~~~~~~~liaenGa~i~~~~~~~w~~~~~~~~~~w~~~v~~il~~~~e~~~gs~ie~k~~ 688 (831)
|+|.|+|+|||++..+..|+..++++|++||||++++.+++ |+... .+.+|++.+.+++++|++||||+++|.|++
T Consensus 533 p~n~v~i~s~~~r~~l~~~~~~~~~lgl~aEhG~f~r~~~~--w~~~~--~~~~w~~~v~~i~~~~~ert~GS~ie~k~~ 608 (732)
T KOG1050|consen 533 PKNIVYIVSGRGRSVLEKWFFGCKNLGLAAEHGYFVRIPGK--WETCV--LDLDWKDLVKDIFQYYTERTPGSYIERKET 608 (732)
T ss_pred CCCeEEEEEccCchhhhhhccccccceeecccCceeccCCc--eeeec--ccccHHHHHHHHHHHHHhcCCCceecccCc
Confidence 99999999999999999999999999999999999999876 99876 689999999999999999999999999999
Q ss_pred eEEEeeccCCCccchHHHHHHHHHHHhHhcCCCeEEEEcCeEEEEEeCCCCHHHHHHHHHHHhhhcCCCcccEEEEcCCc
Q 044635 689 ALVWSYEDADPDFGSCQAKELLDHLESVLANEPVTVKSGQNLVEVKPQGVNKGLVAKRLLSTMQEREMLPDFVLCVGDDR 768 (831)
Q Consensus 689 ~l~~~~~~~d~~~~~~~a~el~~~L~~~l~~~~v~v~~g~~~vEV~p~gvnKG~al~~Ll~~l~~~g~~~d~vla~GD~~ 768 (831)
+++|||+++||+++.+||+++.++|+. .+.++.++.|+..|||.|.|+|||.++++++..+ ..++||++|+||+.
T Consensus 609 ~l~~hy~~ad~~~g~~qA~el~~~l~~--~~~~~~v~~g~~~Vev~~~gvsk~~~~~~~~~~~---~~~~df~~c~g~d~ 683 (732)
T KOG1050|consen 609 ALVWHYRNADPEFGELQAKELLEHLES--KNEPVEVVRGKHIVEVRPQGVSKGLAAERILSEM---VKEPDFVLCIGDDR 683 (732)
T ss_pred eEEEeeeccCcchhHHHHHHHHHHhcc--cCCCeEEEecCceEEEcccccchHHHHHHHHHhc---CCCcceEEEecCCC
Confidence 999999999999999999999999998 7889999999999999999999999999999987 45679999999999
Q ss_pred hhHHHHHHcchhcCCCCCCCCCceEEEEeCCCCcccceEeCChhHHHHHHH
Q 044635 769 SDEDMFEVIISSMAGPSIAPRAEVFACTVGRKPSKAKYYLDDTVEIVRLMQ 819 (831)
Q Consensus 769 NDe~Mf~~a~~~~~~~~~~~~~~~~~v~vG~~~s~A~y~l~d~~eV~~~L~ 819 (831)
.|++||.++........ ....|+|+||.++|+|+|+++++.||+++|+
T Consensus 684 tDed~~~~~~~~~~~~~---~~~~F~~~~g~~~t~a~~~~~~~~~v~~~l~ 731 (732)
T KOG1050|consen 684 TDEDMFEFISKAKDPEK---VEEIFACTVGQKPSKAKYFLDDTHEVIRLLQ 731 (732)
T ss_pred ChHHHHHHHhhccCCcc---cceEEEEEcCCCCcccccccCChHHHHhhcc
Confidence 99999999986532221 1678999999999999999999999999986
No 6
>PRK10117 trehalose-6-phosphate synthase; Provisional
Probab=100.00 E-value=9e-117 Score=985.30 Aligned_cols=446 Identities=28% Similarity=0.551 Sum_probs=410.5
Q ss_pred CcEEEEEcCCccceeecCCCCCCeEEeeCCCchHHHhhhccCCCCCCeEEEeccCCcCCcchhhhHhHhhccCeeEEEEe
Q 044635 60 DRIIIVANQLPIRAQRKSDNSKGWIFSWDENSLLLQLKDGLGDDDIEVIYVGCLKEEIHVNEQDEVSQILLDTFKCVPTF 139 (831)
Q Consensus 60 ~r~iivsnrlP~~~~~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~wvG~~~~~~~~~~~~~~~~~~~~~~~~~pv~ 139 (831)
+||||||||+|+.. + + +.++|||+++|.+.+.+ .+++||||+|...++ .+.+......+|+|.||+
T Consensus 2 ~rLivVSNRlp~~~-----~---~--~~~~GGL~~aL~~~l~~--~~g~WvGW~g~~~~~--~~~~~~~~~~~~~~~~v~ 67 (474)
T PRK10117 2 SRLVVVSNRIAPPD-----E---H--KASAGGLAVGILGALKA--AGGLWFGWSGETGNE--DQPLKKVKKGNITWASFN 67 (474)
T ss_pred CCEEEEECCCcCCC-----C---C--CcCCCCcHHHHHHHHHh--cCceEEEecCCCCCC--cccchhhhcCCceEEEec
Confidence 68999999999622 1 1 34568999999998765 599999999964322 222433334679999999
Q ss_pred CChHhhhhHhhhhhccccccccccCCCCCCCCCCccChhhHHHHHHHHHHHHHHHHHHcCCCCCEEEEeCccccchHHHH
Q 044635 140 LPPDLFSRYYHGFCKQQLWPLFHYMLPLSPDLGGRFNRSLWQAYVSVNKIFADRIMEVINPEDDFVWVHDYHLMVLPTFL 219 (831)
Q Consensus 140 l~~~~~~~~y~gf~~~~lWp~~H~~~~~~~~~~~~~~~~~w~~Y~~vN~~fa~~i~~~~~~~~d~vwvhDyhL~llp~~l 219 (831)
|+++++++||+||||++|||+|||+++. ..|+++.|++|++||++||++|++.++| +|+|||||||||+||++|
T Consensus 68 L~~~~~~~yY~gfsn~~LWPlfHy~~~~-----~~~~~~~w~~Y~~VN~~FA~~v~~~~~~-~D~VWVHDYhL~llp~~L 141 (474)
T PRK10117 68 LSEQDYDEYYNQFSNAVLWPAFHYRLDL-----VQFQRPAWEGYLRVNALLADKLLPLLKD-DDIIWIHDYHLLPFASEL 141 (474)
T ss_pred CCHHHHHHHHhhhhhcchhhhhCCCCCc-----cCcCHHHHHHHHHHHHHHHHHHHHhcCC-CCEEEEeccHhhHHHHHH
Confidence 9999999999999999999999999765 5899999999999999999999999997 599999999999999999
Q ss_pred HhhcCCCeEEEEEeccCCChHHhhcCCChHHHHHHHhcCCeEeecCHHhHHHHHHHHHHHhCCeecccCceeeEEEcCEE
Q 044635 220 RKRFNRVKLGFFLHSPFPSSEIYKTLPIREEILRALLNSDLIGFHTFDYARHFLSCCSRMLGLTYESKRGYIGLEYYGRT 299 (831)
Q Consensus 220 r~~~~~~~i~~flH~PfP~~e~f~~lp~r~eil~~ll~~dligf~t~~~~~~Fl~~~~r~l~~~~~~~~~~~~~~~~gr~ 299 (831)
|+++|+++||||||||||++|+|++||+|+|||+|||+||+|||||++|++||++||++++|++.... ..+.++||.
T Consensus 142 R~~~~~~~IgFFlHiPFPs~eifr~LP~r~eil~glL~aDlIGFqt~~y~rnFl~~~~~~lg~~~~~~---~~v~~~gr~ 218 (474)
T PRK10117 142 RKRGVNNRIGFFLHIPFPTPEIFNALPPHDELLEQLCDYDLLGFQTENDRLAFLDCLSNLTRVTTRSG---KSHTAWGKA 218 (474)
T ss_pred HHhCCCCcEEEEEeCCCCChHHHhhCCChHHHHHHHHhCccceeCCHHHHHHHHHHHHHHcCCcccCC---CeEEECCeE
Confidence 99999999999999999999999999999999999999999999999999999999999999875321 256788999
Q ss_pred EEEEEeecccChHHHHHhhCCcchHHHHHHHHHHhccCCcEEEEeccCcccccCHHHHHHHHHHHHHhCCCCCCcEEEEE
Q 044635 300 VSIKILPVGIHMGQLQSVLSLPGTEAKVSELIKQFHDQGKVMLLGVDDMDIFKGISLKLLAMEQLLIQHPEWQGKVVLVQ 379 (831)
Q Consensus 300 ~~i~v~P~GId~~~~~~~~~~~~~~~~~~~lr~~~~~~~~~iil~VdRld~~KGi~~~l~A~~~lL~~~P~~~~~vvLvq 379 (831)
++|.++|+|||++.|...+..+ +...++++++++ .++++|+|||||||+|||+++|+||++||++||+|+|||+|+|
T Consensus 219 v~v~~~PigID~~~~~~~a~~~-~~~~~~~lr~~~--~~~~lilgVDRLDytKGi~~rl~Afe~fL~~~Pe~~gkvvlvQ 295 (474)
T PRK10117 219 FRTEVYPIGIEPDEIAKQAAGP-LPPKLAQLKAEL--KNVQNIFSVERLDYSKGLPERFLAYEALLEKYPQHHGKIRYTQ 295 (474)
T ss_pred EEEEEEECeEcHHHHHHHhhch-HHHHHHHHHHHc--CCCeEEEEecccccccCHHHHHHHHHHHHHhChhhcCCEEEEE
Confidence 9999999999999999887765 567788999999 7899999999999999999999999999999999999999999
Q ss_pred EecCCCCCchhHHHHHHHHHHHHHHHhccCCCCCCccEEEecCCCCHHHHHHHHHHcCEeEECCCccCCC--------CC
Q 044635 380 IANPARGRGKDVKEVQAETYSTVERINQTFGKPGYDPVVLIDEPLKFYERIAYYVVAECCLVTAVRDGSE--------PS 451 (831)
Q Consensus 380 ig~p~r~~~~~~~~l~~~i~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv~vvtS~~eGma--------~~ 451 (831)
|+.|+|+++++|++++++|+++|++||++||+.+|+||+|+++.++++++.|+|++||||+|||+||||+ |+
T Consensus 296 ia~psR~~v~~Y~~l~~~v~~~vg~INg~fg~~~w~Pv~y~~~~~~~~~l~alyr~ADv~lVTplRDGMNLVAkEyva~q 375 (474)
T PRK10117 296 IAPTSRGDVQAYQDIRHQLETEAGRINGKYGQLGWTPLYYLNQHFDRKLLMKIFRYSDVGLVTPLRDGMNLVAKEYVAAQ 375 (474)
T ss_pred EcCCCCCccHHHHHHHHHHHHHHHHHHhccCCCCceeEEEecCCCCHHHHHHHHHhccEEEecccccccccccchheeee
Confidence 9999999999999999999999999999999999999999999999999999999999999999999993 44
Q ss_pred C-CCCceEEEecccccccccCCCceeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHhhhhccCCHHHHHHHHHHHHHHHH
Q 044635 452 S-PKKSMLVVSEFIGCSPSLSGAIRVNPWNIDAVSDAMDSALEMADQEKQLRHEKHYRYVSTHDVGYWARSFLQDLERTC 530 (831)
Q Consensus 452 ~-~~~g~lVlSe~~G~~~~l~~allVnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l~~~~ 530 (831)
. +++|+||+|||+||+++|.+|++|||||++++|+||++||+||.+||+.|+++++++|.+||+.+|+++||.+|.++.
T Consensus 376 ~~~~~GvLILSefAGaA~~L~~AllVNP~d~~~~A~Ai~~AL~Mp~~Er~~R~~~l~~~v~~~dv~~W~~~fL~~L~~~~ 455 (474)
T PRK10117 376 DPANPGVLVLSQFAGAANELTSALIVNPYDRDEVAAALDRALTMPLAERISRHAEMLDVIVKNDINHWQECFISDLKQIV 455 (474)
T ss_pred cCCCCccEEEecccchHHHhCCCeEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHhh
Confidence 4 678999999999999999999999999999999999999999999999999999999999999999999999999875
Q ss_pred H
Q 044635 531 R 531 (831)
Q Consensus 531 ~ 531 (831)
.
T Consensus 456 ~ 456 (474)
T PRK10117 456 P 456 (474)
T ss_pred h
Confidence 3
No 7
>TIGR02398 gluc_glyc_Psyn glucosylglycerol-phosphate synthase. Glucosylglycerol-phosphate synthase catalyzes the key step in the biosynthesis of the osmolyte glucosylglycerol. It is known in several cyanobacteria and in Pseudomonas anguilliseptica. The enzyme is closely related to the alpha,alpha-trehalose-phosphate synthase, likewise involved in osmolyte biosynthesis, of E. coli and many other bacteria. A close homolog from Xanthomonas campestris is excluded from this model and scores between trusted and noise.
Probab=100.00 E-value=2.8e-115 Score=984.66 Aligned_cols=455 Identities=28% Similarity=0.461 Sum_probs=418.5
Q ss_pred EEcCCccceeecCCCCCCeEEeeCCCchHHHhhhccCCCCCCeEEEeccCCcCCc-chh-hhHhHhhccCeeEEEEeCCh
Q 044635 65 VANQLPIRAQRKSDNSKGWIFSWDENSLLLQLKDGLGDDDIEVIYVGCLKEEIHV-NEQ-DEVSQILLDTFKCVPTFLPP 142 (831)
Q Consensus 65 vsnrlP~~~~~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~wvG~~~~~~~~-~~~-~~~~~~~~~~~~~~pv~l~~ 142 (831)
||||||+.+.++++|..+|++++++|||+++|.+.+.+. .+++||||+|.+.++ ++. ..+......+|+|.||+|++
T Consensus 1 vsnRlP~~~~~~~~g~~~~~~~~s~gGL~~al~~~l~~~-~~g~Wvgw~g~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~ 79 (487)
T TIGR02398 1 LYHRLPYDEFRGADGKLQRRDPTSPNGIIPTLLSFFGDG-RAGTWVAWAEHDENSGETFDSHMTVPAEYKLTAARIPLSK 79 (487)
T ss_pred CCcCCCceeEECCCCCceEEeccCCCchHHHHHHHhhcc-cceEEEeeCCCCcccccccccccccccCCceeEEEEeCCH
Confidence 799999999987654235888999999999999887554 679999999975221 111 11222224579999999999
Q ss_pred HhhhhHhhhhhccccccccccCCCCCCCCCCccChhhHHHHHHHHHHHHHHHHHHcCCCCCEEEEeCccccchHHHHHhh
Q 044635 143 DLFSRYYHGFCKQQLWPLFHYMLPLSPDLGGRFNRSLWQAYVSVNKIFADRIMEVINPEDDFVWVHDYHLMVLPTFLRKR 222 (831)
Q Consensus 143 ~~~~~~y~gf~~~~lWp~~H~~~~~~~~~~~~~~~~~w~~Y~~vN~~fa~~i~~~~~~~~d~vwvhDyhL~llp~~lr~~ 222 (831)
++++.||+||||++|||+|||+++. ..|+++.|++|++||++||++|++.+++ +|+|||||||||+||++||++
T Consensus 80 ~~~~~~Y~gf~n~~LWPlfH~~~~~-----~~~~~~~w~~Y~~vN~~FA~~i~~~~~~-~d~vWVhDYhL~llp~~LR~~ 153 (487)
T TIGR02398 80 EQVDIFYHITSKEAFWPILHTFPER-----FQFREDDWQVFLKVNRAFAEAACLEAAE-GATVWVHDYNLWLVPGYIRQL 153 (487)
T ss_pred HHHHHHHhhhhhccccccccCCccc-----cCcCHHHHHHHHHHHHHHHHHHHHhcCC-CCEEEEecchhhHHHHHHHHh
Confidence 9999999999999999999998654 5899999999999999999999999987 599999999999999999999
Q ss_pred cCCCeEEEEEeccCCChHHhhcCCChHHHHHHHhcCCeEeecCHHhHHHHHHHHHHHhCCeecccC--------------
Q 044635 223 FNRVKLGFFLHSPFPSSEIYKTLPIREEILRALLNSDLIGFHTFDYARHFLSCCSRMLGLTYESKR-------------- 288 (831)
Q Consensus 223 ~~~~~i~~flH~PfP~~e~f~~lp~r~eil~~ll~~dligf~t~~~~~~Fl~~~~r~l~~~~~~~~-------------- 288 (831)
.|+++||||||||||++|+|++||+|++||+|||+||+|||||++|++||++||+|+||+++....
T Consensus 154 ~~~~~IgfFlHiPFPs~eifr~LP~r~~ll~glL~aDliGFqt~~y~~~Fl~~~~r~lg~~~~~~~~~~~~~~~~g~~~~ 233 (487)
T TIGR02398 154 RPDLKIAFFHHTPFPSADVFNILPWREQIIGSLLCCDYIGFHIPRYVENFVDAARGLMPLQTVSRQNVDPRFITVGTALG 233 (487)
T ss_pred CCCCeEEEEeeCCCCChHHHhhCCchHHHHHHHhcCCeEEeCCHHHHHHHHHHHHHHhCCcccccccccccccccccccc
Confidence 999999999999999999999999999999999999999999999999999999999998765432
Q ss_pred ---ceeeEEEcCEEEEEEEeecccChHHHHHhhCCcchHHHHHHHHHHhccCCcEEEEeccCcccccCHHHHHHHHHHHH
Q 044635 289 ---GYIGLEYYGRTVSIKILPVGIHMGQLQSVLSLPGTEAKVSELIKQFHDQGKVMLLGVDDMDIFKGISLKLLAMEQLL 365 (831)
Q Consensus 289 ---~~~~~~~~gr~~~i~v~P~GId~~~~~~~~~~~~~~~~~~~lr~~~~~~~~~iil~VdRld~~KGi~~~l~A~~~lL 365 (831)
..+++.++||.++|+++|+|||++.|.+....+++.+.++++|+++ .++++|++|||||++|||+++|+||++||
T Consensus 234 ~~~~~~~v~~~gr~v~v~~~PiGID~~~f~~~~~~~~~~~~~~~lr~~~--~~~kiIl~VDRLDy~KGI~~kl~Afe~~L 311 (487)
T TIGR02398 234 EERMTTALDTGNRVVKLGAHPVGTDPERIRSALAAASIREMMERIRSEL--AGVKLILSAERVDYTKGILEKLNAYERLL 311 (487)
T ss_pred ccccccceeECCEEEEEEEEECEecHHHHHHHhcCchHHHHHHHHHHHc--CCceEEEEecccccccCHHHHHHHHHHHH
Confidence 1235889999999999999999999999888888989999999999 78999999999999999999999999999
Q ss_pred HhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhccCCCCCCccEEEecCCCCHHHHHHHHHHcCEeEECCCc
Q 044635 366 IQHPEWQGKVVLVQIANPARGRGKDVKEVQAETYSTVERINQTFGKPGYDPVVLIDEPLKFYERIAYYVVAECCLVTAVR 445 (831)
Q Consensus 366 ~~~P~~~~~vvLvqig~p~r~~~~~~~~l~~~i~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv~vvtS~~ 445 (831)
++||+++||++|||||.|+|++.++|++++++++++|++||++||+.+|+||+++++.++++++.+||++||||++||+|
T Consensus 312 ~~~Pe~~gkv~Lvqi~~psr~~v~~y~~l~~~v~~~v~~IN~~fg~~~~~pv~~~~~~v~~~el~alYr~ADV~lvT~lr 391 (487)
T TIGR02398 312 ERRPELLGKVTLVTACVPAASGMTIYDELQGQIEQAVGRINGRFARIGWTPLQFFTRSLPYEEVSAWFAMADVMWITPLR 391 (487)
T ss_pred HhCccccCceEEEEEeCCCcccchHHHHHHHHHHHHHHHHhhccCCCCCccEEEEcCCCCHHHHHHHHHhCCEEEECccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCC--------CCCCCCCceEEEecccccccccCCCceeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHhhhhccCCHHH
Q 044635 446 DGS--------EPSSPKKSMLVVSEFIGCSPSLSGAIRVNPWNIDAVSDAMDSALEMADQEKQLRHEKHYRYVSTHDVGY 517 (831)
Q Consensus 446 eGm--------a~~~~~~g~lVlSe~~G~~~~l~~allVnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~ 517 (831)
||| +|+.+++|+||+|||+||+++|.+|++|||||++++|+||.+||+||.+||+.|+++++++|.+||+.+
T Consensus 392 DGmNLVa~Eyva~~~~~~GvLILSefaGaa~~l~~AllVNP~d~~~~A~ai~~AL~m~~~Er~~R~~~l~~~v~~~d~~~ 471 (487)
T TIGR02398 392 DGLNLVAKEYVAAQGLLDGVLVLSEFAGAAVELKGALLTNPYDPVRMDETIYVALAMPKAEQQARMREMFDAVNYYDVQR 471 (487)
T ss_pred cccCcchhhHHhhhcCCCCCEEEeccccchhhcCCCEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhhCCHHH
Confidence 999 455677899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHH
Q 044635 518 WARSFLQDLER 528 (831)
Q Consensus 518 W~~~~l~~l~~ 528 (831)
|+++||.+|..
T Consensus 472 W~~~fl~~l~~ 482 (487)
T TIGR02398 472 WADEFLAAVSP 482 (487)
T ss_pred HHHHHHHHhhh
Confidence 99999999864
No 8
>PF00982 Glyco_transf_20: Glycosyltransferase family 20; InterPro: IPR001830 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 20 GT20 from CAZY comprises enzymes with only one known activity; alpha, alpha-trehalose-phosphate synthase [UDP-forming] (2.4.1.15 from EC). Synthesis of trehalose in the yeast Saccharomyces cerevisiae is catalysed by the trehalose-6-phosphate (Tre6P) synthase/phosphatase complex, which is composed of at least three different subunits encoded by the genes TPS1, TPS2, and TSL1. Tps1 and Tps2 carry the catalytic activities of trehalose synthesis, namely Tre6P synthase (Tps1) and Tre6P phosphatase (Tps2), while TsI1 has regulatory functions. There is some evidence that TsI1 and Tps3 may share a common function with respect to regulation and/or structural stabilisation of the Tre6P synthase/phosphatase complex in exponentially growing, heat-shocked cells []. OtsA (trehalose-6-phosphate synthase) from Escherichia coli has homology to the full-length TPS1, the N-terminal part of TPS2 and an internal region of TPS3 (TSL1) of yeast [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1UQU_A 2WTX_A 1UQT_B 1GZ5_B.
Probab=100.00 E-value=6e-116 Score=993.11 Aligned_cols=459 Identities=46% Similarity=0.859 Sum_probs=351.7
Q ss_pred cEEEEEcCCccceeecCCCCCC--eEEeeCCCchHHHhhhccCCCCCCeEEEeccCCcCCcch--hhhHhHhhccCeeEE
Q 044635 61 RIIIVANQLPIRAQRKSDNSKG--WIFSWDENSLLLQLKDGLGDDDIEVIYVGCLKEEIHVNE--QDEVSQILLDTFKCV 136 (831)
Q Consensus 61 r~iivsnrlP~~~~~~~~~~~~--~~~~~~~~~l~~~l~~~l~~~~~~~~wvG~~~~~~~~~~--~~~~~~~~~~~~~~~ 136 (831)
|+||||||||+.++++++. |. |+++.+.|||++++.+.+.+ .+++||||+|.+.+..+ ++.+.+.+.++|+|+
T Consensus 2 ~livVsnrlPv~~~r~~~~-G~~~~~~~~~~ggL~~al~~l~~~--~~~~WvGw~g~~~~~~~~~~~~v~~~~~~~~~~~ 78 (474)
T PF00982_consen 2 RLIVVSNRLPVSVKRDPDD-GSWGWSWKPSAGGLVSALDPLLKK--RGGIWVGWPGVDVDEEEDEQDRVEPRLLDEYNCV 78 (474)
T ss_dssp --------------------------GGGGS-HHHHHHHHHHHH--H-EEEEEEEEEES-TTS---EEEE---ETTEEEE
T ss_pred Ccccccccccccccccccc-cccccccccCCCcHHHHHHHHHhc--CCCEEEEeCCCcCccccccccchhhhcccCceEE
Confidence 7999999999999988733 45 88889999999999775554 69999999998776544 556777788999999
Q ss_pred EEeCChHhhhhHhhhhhccccccccccCCCCCCCCCCccChhhHHHHHHHHHHHHHHHHHHcCCCCCEEEEeCccccchH
Q 044635 137 PTFLPPDLFSRYYHGFCKQQLWPLFHYMLPLSPDLGGRFNRSLWQAYVSVNKIFADRIMEVINPEDDFVWVHDYHLMVLP 216 (831)
Q Consensus 137 pv~l~~~~~~~~y~gf~~~~lWp~~H~~~~~~~~~~~~~~~~~w~~Y~~vN~~fa~~i~~~~~~~~d~vwvhDyhL~llp 216 (831)
||||+++++++||+||||++|||+|||.++..|.. ..|+.+.|++|++||++||++|++.+++ +|+|||||||||+||
T Consensus 79 pV~l~~~~~~~~Y~gf~n~~LWPlfHy~~~~~~~~-~~~~~~~w~~Y~~vN~~FA~~i~~~~~~-~D~VWVhDYhL~llP 156 (474)
T PF00982_consen 79 PVFLSPEEYDGYYNGFCNQVLWPLFHYRLDSRPDL-ARFEEEWWEAYKRVNRRFADAIAEVYRP-GDLVWVHDYHLMLLP 156 (474)
T ss_dssp EEEE-HHHHHHHTTTHHHHTHHHHHTT-GG----G-----HHHHHHHHHHHHHHHHHHGGG--T-T-EEEEESGGGTTHH
T ss_pred EEEcCHHHHHHHHHhhhhhccCccccccccccccc-chhhHHHHHHHHHHHHHHHHHHHHhCcC-CCEEEEeCCcHHHHH
Confidence 99999999999999999999999999987622322 6899999999999999999999999996 599999999999999
Q ss_pred HHHHhhcCCCeEEEEEeccCCChHHhhcCCChHHHHHHHhcCCeEeecCHHhHHHHHHHHHHHhCCeecccCceeeEEEc
Q 044635 217 TFLRKRFNRVKLGFFLHSPFPSSEIYKTLPIREEILRALLNSDLIGFHTFDYARHFLSCCSRMLGLTYESKRGYIGLEYY 296 (831)
Q Consensus 217 ~~lr~~~~~~~i~~flH~PfP~~e~f~~lp~r~eil~~ll~~dligf~t~~~~~~Fl~~~~r~l~~~~~~~~~~~~~~~~ 296 (831)
++||+++|+++||||||||||++|+|++||+|++||+|||+||+|||||++|++||++||+|++|+++...+| ++.++
T Consensus 157 ~~LR~~~~~~~IgfFlHiPFPs~e~fr~lP~r~eiL~glL~aDlIgFqt~~~~~nFl~~~~r~lg~~~~~~~~--~v~~~ 234 (474)
T PF00982_consen 157 QMLRERGPDARIGFFLHIPFPSSEIFRCLPWREEILRGLLGADLIGFQTFEYARNFLSCCKRLLGLEVDSDRG--TVEYN 234 (474)
T ss_dssp HHHHHTT--SEEEEEE-S----HHHHTTSTTHHHHHHHHTTSSEEEESSHHHHHHHHHHHHHHS-EEEEETTE---EEET
T ss_pred HHHHhhcCCceEeeEEecCCCCHHHHhhCCcHHHHHHHhhcCCEEEEecHHHHHHHHHHHHHHcCCcccCCCc--eEEEC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999887765 69999
Q ss_pred CEEEEEEEeecccChHHHHHhhCCcchHHHHHHHHHHhccCC-cEEEEeccCcccccCHHHHHHHHHHHHHhCCCCCCcE
Q 044635 297 GRTVSIKILPVGIHMGQLQSVLSLPGTEAKVSELIKQFHDQG-KVMLLGVDDMDIFKGISLKLLAMEQLLIQHPEWQGKV 375 (831)
Q Consensus 297 gr~~~i~v~P~GId~~~~~~~~~~~~~~~~~~~lr~~~~~~~-~~iil~VdRld~~KGi~~~l~A~~~lL~~~P~~~~~v 375 (831)
||.++|.++|+|||++.|...+.++++.+..+++++++ ++ +++|++|||+|++|||+++|+||++||++||+++|||
T Consensus 235 Gr~v~v~~~pigId~~~~~~~~~~~~v~~~~~~l~~~~--~~~~~ii~gvDrld~~kGi~~kl~Afe~fL~~~P~~~~kv 312 (474)
T PF00982_consen 235 GRRVRVGVFPIGIDPDAFAQLARSPEVQERAEELREKF--KGKRKIIVGVDRLDYTKGIPEKLRAFERFLERYPEYRGKV 312 (474)
T ss_dssp TEEEEEEE------HHHHHHHHH-S---HHHHHHHHHT--TT-SEEEEEE--B-GGG-HHHHHHHHHHHHHH-GGGTTTE
T ss_pred CEEEEEEEeeccCChHHHHhhccChHHHHHHHHHHHhc--CCCcEEEEEeccchhhcCHHHHHHHHHHHHHhCcCccCcE
Confidence 99999999999999999999999999999999999999 77 5999999999999999999999999999999999999
Q ss_pred EEEEEecCCCCCchhHHHHHHHHHHHHHHHhccCCCCCCccEEEecCCCCHHHHHHHHHHcCEeEECCCccCC-------
Q 044635 376 VLVQIANPARGRGKDVKEVQAETYSTVERINQTFGKPGYDPVVLIDEPLKFYERIAYYVVAECCLVTAVRDGS------- 448 (831)
Q Consensus 376 vLvqig~p~r~~~~~~~~l~~~i~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv~vvtS~~eGm------- 448 (831)
+|+||+.|+|++.++|++++++++++|++||++||+.+|+||+|+.+.++++++.|+|++||||++||+||||
T Consensus 313 ~liQi~~psr~~~~~y~~~~~~v~~~v~~IN~~~g~~~~~PI~~~~~~~~~~~~~aly~~aDv~lvTslrDGmNLva~Ey 392 (474)
T PF00982_consen 313 VLIQIAVPSREDVPEYQELRREVEELVGRINGKYGTPDWTPIIYIYRSLSFEELLALYRAADVALVTSLRDGMNLVAKEY 392 (474)
T ss_dssp EEEEE--B-STTSHHHHHHHHHHHHHHHHHHHHH-BTTB-SEEEE-S---HHHHHHHHHH-SEEEE--SSBS--HHHHHH
T ss_pred EEEEEeeccCccchhHHHHHHHHHHHHHHHHhhcccCCceeEEEEecCCCHHHHHHHHHhhhhEEecchhhccCCcceEE
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred -CCCCCCCceEEEecccccccccC-CCceeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHhhhhccCCHHHHHHHHHHHH
Q 044635 449 -EPSSPKKSMLVVSEFIGCSPSLS-GAIRVNPWNIDAVSDAMDSALEMADQEKQLRHEKHYRYVSTHDVGYWARSFLQDL 526 (831)
Q Consensus 449 -a~~~~~~g~lVlSe~~G~~~~l~-~allVnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l 526 (831)
+|+.+++|+||+|||+||+++|. +|++|||||++++|+||++||+||++||+.|+++++++|.+||+.+|+++||++|
T Consensus 393 va~q~~~~GvLiLSefaGaa~~L~~~al~VNP~d~~~~A~ai~~AL~M~~~Er~~r~~~~~~~v~~~~~~~W~~~~l~~L 472 (474)
T PF00982_consen 393 VACQDDNPGVLILSEFAGAAEQLSEAALLVNPWDIEEVADAIHEALTMPPEERKERHARLREYVREHDVQWWAESFLRDL 472 (474)
T ss_dssp HHHS-TS--EEEEETTBGGGGT-TTS-EEE-TT-HHHHHHHHHHHHT--HHHHHHHHHHHHHHHHHT-HHHHHHHHHHHH
T ss_pred EEEecCCCCceEeeccCCHHHHcCCccEEECCCChHHHHHHHHHHHcCCHHHHHHHHHHHHHHhHhCCHHHHHHHHHHHh
Confidence 45667899999999999999997 6699999999999999999999999999999999999999999999999999999
Q ss_pred HH
Q 044635 527 ER 528 (831)
Q Consensus 527 ~~ 528 (831)
++
T Consensus 473 ~~ 474 (474)
T PF00982_consen 473 KR 474 (474)
T ss_dssp HT
T ss_pred hC
Confidence 74
No 9
>COG0380 OtsA Trehalose-6-phosphate synthase [Carbohydrate transport and metabolism]
Probab=100.00 E-value=2.5e-111 Score=935.09 Aligned_cols=459 Identities=40% Similarity=0.702 Sum_probs=423.8
Q ss_pred CCCCCCcEEEEEcCCccceeecCCCCCCeEEeeCCCchHHHhhhccCCCCCCeEEEeccCCcCCcchhhhHhHhhccCee
Q 044635 55 SSVQRDRIIIVANQLPIRAQRKSDNSKGWIFSWDENSLLLQLKDGLGDDDIEVIYVGCLKEEIHVNEQDEVSQILLDTFK 134 (831)
Q Consensus 55 ~~~~~~r~iivsnrlP~~~~~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~wvG~~~~~~~~~~~~~~~~~~~~~~~ 134 (831)
+.....|+|+||||+|+...+..++ +...+..++|||+++|++.+.. .+++|+||+|...+..+..........++.
T Consensus 10 ~~~~~~r~ivvsnR~p~~~~~~~~~-~~~~~~~s~ggL~~~l~~~~~~--~~~~W~gw~G~~~~~~~~~~~~~~~~~~~~ 86 (486)
T COG0380 10 SPLEDSRLIVVSNRLPVKKTPEGDK-GIEFGKRSAGGLVTALKPLLRV--DGGTWIGWSGTTGPTDESSDDLKERIGEFT 86 (486)
T ss_pred CcccCCcEEEEEccCCCcccccCCC-cceeeccCCcchhhhcchhhHh--hcceEEecCceeccccccchhhhhccccce
Confidence 4567889999999999998765555 6788899999999999875554 699999999976542232223333345899
Q ss_pred EEEEeCChHhhhhHhhhhhccccccccccCCCCCCCCCCccChhhHHHHHHHHHHHHHHHHHHcCCCCCEEEEeCccccc
Q 044635 135 CVPTFLPPDLFSRYYHGFCKQQLWPLFHYMLPLSPDLGGRFNRSLWQAYVSVNKIFADRIMEVINPEDDFVWVHDYHLMV 214 (831)
Q Consensus 135 ~~pv~l~~~~~~~~y~gf~~~~lWp~~H~~~~~~~~~~~~~~~~~w~~Y~~vN~~fa~~i~~~~~~~~d~vwvhDyhL~l 214 (831)
..||+++.+++++||+||||++|||+|||+++. ..|++.+|++|++||++||++|++.+++ +|+||||||||+|
T Consensus 87 ~~~v~l~~~~~~~~Y~~fsn~iLWP~~Hy~~~~-----~~~~~~~w~~Y~~vN~~FAd~i~~~~~~-gDiIWVhDYhL~L 160 (486)
T COG0380 87 SAPVILSDEDYEGYYNGFSNAILWPLFHYFIDD-----VAYERNWWDAYVKVNRKFADKIVEIYEP-GDIIWVHDYHLLL 160 (486)
T ss_pred EEEEecCHHHHHHHHHHhhHhhhcceeeeecCc-----cccchHHHHHHHHHHHHHHHHHHHhcCC-CCEEEEEechhhh
Confidence 999999999999999999999999999999875 5899999999999999999999999997 5999999999999
Q ss_pred hHHHHHhhcCCCeEEEEEeccCCChHHhhcCCChHHHHHHHhcCCeEeecCHHhHHHHHHHHHHHhCCeecccCceeeEE
Q 044635 215 LPTFLRKRFNRVKLGFFLHSPFPSSEIYKTLPIREEILRALLNSDLIGFHTFDYARHFLSCCSRMLGLTYESKRGYIGLE 294 (831)
Q Consensus 215 lp~~lr~~~~~~~i~~flH~PfP~~e~f~~lp~r~eil~~ll~~dligf~t~~~~~~Fl~~~~r~l~~~~~~~~~~~~~~ 294 (831)
||+|||++.|+++||||||||||++|+|+|||+|+||++|||+||+|||||++|++||+++|+|+++... ...+.
T Consensus 161 ~P~mlR~~~~~~~IgfFlHiPfPssEvfr~lP~r~eIl~gll~~dligFqt~~y~~nF~~~~~r~~~~~~-----~~~~~ 235 (486)
T COG0380 161 VPQMLRERIPDAKIGFFLHIPFPSSEVFRCLPWREEILEGLLGADLIGFQTESYARNFLDLCSRLLGVTG-----DADIR 235 (486)
T ss_pred hHHHHHHhCCCceEEEEEeCCCCCHHHHhhCchHHHHHHHhhcCCeeEecCHHHHHHHHHHHHHhccccc-----ccccc
Confidence 9999999999999999999999999999999999999999999999999999999999999999998652 11233
Q ss_pred ---EcCEEEEEEEeecccChHHHHHhhCCcchHHHHHHHHHHhccCC-cEEEEeccCcccccCHHHHHHHHHHHHHhCCC
Q 044635 295 ---YYGRTVSIKILPVGIHMGQLQSVLSLPGTEAKVSELIKQFHDQG-KVMLLGVDDMDIFKGISLKLLAMEQLLIQHPE 370 (831)
Q Consensus 295 ---~~gr~~~i~v~P~GId~~~~~~~~~~~~~~~~~~~lr~~~~~~~-~~iil~VdRld~~KGi~~~l~A~~~lL~~~P~ 370 (831)
++|+.+++.++|+|||+..|.....++.++.++.++++.+ .+ +++|++|||+||+||++.+++||++||++||+
T Consensus 236 ~~~~~~~~v~v~a~PIgID~~~~~~~~~~~~v~~~~~el~~~~--~~~~kiivgvDRlDy~kGi~~rl~Afe~lL~~~Pe 313 (486)
T COG0380 236 FNGADGRIVKVGAFPIGIDPEEFERALKSPSVQEKVLELKAEL--GRNKKLIVGVDRLDYSKGIPQRLLAFERLLEEYPE 313 (486)
T ss_pred ccccCCceEEEEEEeeecCHHHHHHhhcCCchhhHHHHHHHHh--cCCceEEEEehhcccccCcHHHHHHHHHHHHhChh
Confidence 4489999999999999999999999999988999999999 55 99999999999999999999999999999999
Q ss_pred CCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhccCCCCCCccEEEecCCCCHHHHHHHHHHcCEeEECCCccCC--
Q 044635 371 WQGKVVLVQIANPARGRGKDVKEVQAETYSTVERINQTFGKPGYDPVVLIDEPLKFYERIAYYVVAECCLVTAVRDGS-- 448 (831)
Q Consensus 371 ~~~~vvLvqig~p~r~~~~~~~~l~~~i~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv~vvtS~~eGm-- 448 (831)
|+|||+|+||+.|+|++.++|+.++.+++++|++||++||+.+|+||+|++++++++++.+||++||++++||+||||
T Consensus 314 ~~~kvvliQi~~pSr~~v~~y~~~~~~i~~~V~rIN~~fG~~~~~Pv~~l~~~~~~~~l~al~~~aDv~lVtplrDGMNL 393 (486)
T COG0380 314 WRGKVVLLQIAPPSREDVEEYQALRLQIEELVGRINGEFGSLSWTPVHYLHRDLDRNELLALYRAADVMLVTPLRDGMNL 393 (486)
T ss_pred hhCceEEEEecCCCccccHHHHHHHHHHHHHHHHHHhhcCCCCcceeEEEeccCCHHHHHHHHhhhceeeeccccccccH
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ------CCCCCCCceEEEecccccccccCCCceeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHhhhhccCCHHHHHHHH
Q 044635 449 ------EPSSPKKSMLVVSEFIGCSPSLSGAIRVNPWNIDAVSDAMDSALEMADQEKQLRHEKHYRYVSTHDVGYWARSF 522 (831)
Q Consensus 449 ------a~~~~~~g~lVlSe~~G~~~~l~~allVnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~~ 522 (831)
+|+.+++|+||+|||+||+.+|.+|++|||||.+++|+||++||+|+.+||++|++++++.|.+||+++|+++|
T Consensus 394 vakEyVa~q~~~~G~LiLSeFaGaa~~L~~AliVNP~d~~~va~ai~~AL~m~~eEr~~r~~~~~~~v~~~d~~~W~~~f 473 (486)
T COG0380 394 VAKEYVAAQRDKPGVLILSEFAGAASELRDALIVNPWDTKEVADAIKRALTMSLEERKERHEKLLKQVLTHDVARWANSF 473 (486)
T ss_pred HHHHHHHhhcCCCCcEEEeccccchhhhccCEeECCCChHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhhhHHHHHHHH
Confidence 45668899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHH
Q 044635 523 LQDLERT 529 (831)
Q Consensus 523 l~~l~~~ 529 (831)
+.+|.++
T Consensus 474 l~~la~~ 480 (486)
T COG0380 474 LDDLAQA 480 (486)
T ss_pred HHHHHhc
Confidence 9999873
No 10
>TIGR02400 trehalose_OtsA alpha,alpha-trehalose-phosphate synthase [UDP-forming]. This enzyme catalyzes the key, penultimate step in biosynthesis of trehalose, a compatible solute made as an osmoprotectant in some species in all three domains of life. The gene symbol OtsA stands for osmotically regulated trehalose synthesis A. Trehalose helps protect against both osmotic and thermal stresses, and is made from two glucose subunits. This model excludes glucosylglycerol-phosphate synthase, an enzyme of an analogous osmoprotectant system in many cyanobacterial strains. This model does not identify archaeal examples, as they are more divergent than glucosylglycerol-phosphate synthase. Sequences that score in the gray zone between the trusted and noise cutoffs include a number of yeast multidomain proteins in which the N-terminal domain may be functionally equivalent to this family. The gray zone also includes the OtsA of Cornyebacterium glutamicum (and related species), shown to be responsib
Probab=100.00 E-value=1.2e-103 Score=896.60 Aligned_cols=446 Identities=39% Similarity=0.719 Sum_probs=413.1
Q ss_pred cEEEEEcCCccceeecCCCCCCeEEeeCCCchHHHhhhccCCCCCCeEEEeccCCcCCcc-hhhhHhHhhccCeeEEEEe
Q 044635 61 RIIIVANQLPIRAQRKSDNSKGWIFSWDENSLLLQLKDGLGDDDIEVIYVGCLKEEIHVN-EQDEVSQILLDTFKCVPTF 139 (831)
Q Consensus 61 r~iivsnrlP~~~~~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~wvG~~~~~~~~~-~~~~~~~~~~~~~~~~pv~ 139 (831)
||||||||+|+.+.++ + ++++.|||+++|.+.+.+ .+++||||+|...+++ ++.++...+..+|+|+|||
T Consensus 1 ~livvsnr~p~~~~~~----~---~~~~~gGl~~al~~~~~~--~~~~Wvgw~g~~~~~~~~~~~~~~~~~~~~~~~~v~ 71 (456)
T TIGR02400 1 RLIVVSNRLPVPITRG----G---LEPSAGGLAVALLGALKA--TGGVWFGWSGKTVEEDEGEPFLRTELEGKITLAPVF 71 (456)
T ss_pred CEEEEECCCCccccCC----C---CCcCCCCHHHHHHHHHhc--cCcEEEEeCCCCCCccchhhhHHHhhccCceEEEEE
Confidence 6999999999987653 2 566789999999987765 5999999999765532 3344555567889999999
Q ss_pred CChHhhhhHhhhhhccccccccccCCCCCCCCCCccChhhHHHHHHHHHHHHHHHHHHcCCCCCEEEEeCccccchHHHH
Q 044635 140 LPPDLFSRYYHGFCKQQLWPLFHYMLPLSPDLGGRFNRSLWQAYVSVNKIFADRIMEVINPEDDFVWVHDYHLMVLPTFL 219 (831)
Q Consensus 140 l~~~~~~~~y~gf~~~~lWp~~H~~~~~~~~~~~~~~~~~w~~Y~~vN~~fa~~i~~~~~~~~d~vwvhDyhL~llp~~l 219 (831)
|++++++.||+||||++|||+|||+++. ..|+++.|++|++||++||++|++++++ +|+|||||||||+||.+|
T Consensus 72 l~~~~~~~~y~gf~n~~lWPl~H~~~~~-----~~~~~~~w~~Y~~vN~~fA~~i~~~~~~-~d~vwvhDYhl~l~p~~l 145 (456)
T TIGR02400 72 LSEEDVDGYYNGFSNSTLWPLFHYRPDL-----IRYDRKAWEAYRRVNRLFAEALAPLLQP-GDIVWVHDYHLMLLPAML 145 (456)
T ss_pred CCHHHHHHHHHHhhhhhcchhhcccccc-----cccCHHHHHHHHHHHHHHHHHHHHhCCC-CCEEEEecchhhHHHHHH
Confidence 9999999999999999999999999654 5899999999999999999999999987 599999999999999999
Q ss_pred HhhcCCCeEEEEEeccCCChHHhhcCCChHHHHHHHhcCCeEeecCHHhHHHHHHHHHHHhCCeecccCceeeEEEcCEE
Q 044635 220 RKRFNRVKLGFFLHSPFPSSEIYKTLPIREEILRALLNSDLIGFHTFDYARHFLSCCSRMLGLTYESKRGYIGLEYYGRT 299 (831)
Q Consensus 220 r~~~~~~~i~~flH~PfP~~e~f~~lp~r~eil~~ll~~dligf~t~~~~~~Fl~~~~r~l~~~~~~~~~~~~~~~~gr~ 299 (831)
|++.|+++||||||||||++|+|++||+|++||+|||+||+|||||++|++||++||+|++|++.... ++.+.|+.
T Consensus 146 r~~~~~~~igfFlHipfP~~e~f~~lp~r~~il~gll~~dligF~t~~~~~~Fl~~~~~~l~~~~~~~----~~~~~g~~ 221 (456)
T TIGR02400 146 RELGVQNKIGFFLHIPFPSSEIYRTLPWRRELLEGLLAYDLVGFQTYDDARNFLSAVSRELGLETLPN----GVESGGRT 221 (456)
T ss_pred HhhCCCCeEEEEEeCCCCChHHHhhCCcHHHHHHHHhcCCEEEECCHHHHHHHHHHHHHHhCCcccCC----ceEECCcE
Confidence 99999999999999999999999999999999999999999999999999999999999999876532 46788999
Q ss_pred EEEEEeecccChHHHHHhhCCcchHHHHHHHHHHhccCCcEEEEeccCcccccCHHHHHHHHHHHHHhCCCCCCcEEEEE
Q 044635 300 VSIKILPVGIHMGQLQSVLSLPGTEAKVSELIKQFHDQGKVMLLGVDDMDIFKGISLKLLAMEQLLIQHPEWQGKVVLVQ 379 (831)
Q Consensus 300 ~~i~v~P~GId~~~~~~~~~~~~~~~~~~~lr~~~~~~~~~iil~VdRld~~KGi~~~l~A~~~lL~~~P~~~~~vvLvq 379 (831)
++|.++|+|||++.|.+....+.+.+..+++|+++ .++++|++|||+++.||++.+|+||++|++++|+++++++|+|
T Consensus 222 ~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~--~~~~vIl~VgRLd~~KGi~~ll~A~~~ll~~~p~~~~~v~Lv~ 299 (456)
T TIGR02400 222 VRVGAFPIGIDVDRFAEQAKKPSVQKRIAELRESL--KGRKLIIGVDRLDYSKGLPERLLAFERFLEEHPEWRGKVVLVQ 299 (456)
T ss_pred EEEEEecCcCCHHHHHHHhcChhHHHHHHHHHHHc--CCCeEEEEccccccccCHHHHHHHHHHHHHhCccccCceEEEE
Confidence 99999999999999998887777778888899999 7999999999999999999999999999999999999999999
Q ss_pred EecCCCCCchhHHHHHHHHHHHHHHHhccCCCCCCccEEEecCCCCHHHHHHHHHHcCEeEECCCccCC--------CCC
Q 044635 380 IANPARGRGKDVKEVQAETYSTVERINQTFGKPGYDPVVLIDEPLKFYERIAYYVVAECCLVTAVRDGS--------EPS 451 (831)
Q Consensus 380 ig~p~r~~~~~~~~l~~~i~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv~vvtS~~eGm--------a~~ 451 (831)
|+.|+|+++++|+++++++++++++||++||..+|.|++++.+.++++|+.++|++|||||+||++||| ||.
T Consensus 300 v~~p~rg~~~~~~~l~~~i~~lv~~in~~~~~~~~~pv~~l~~~~~~~el~aly~aaDv~vv~S~~EG~~Lv~lEamA~g 379 (456)
T TIGR02400 300 IAVPSRGDVPEYQQLRRQVEELVGRINGRFGTLDWTPIRYLNRSYDREELMALYRAADVGLVTPLRDGMNLVAKEYVAAQ 379 (456)
T ss_pred EecCCccCchHHHHHHHHHHHHHHHHHhccCCCCCccEEEEcCCCCHHHHHHHHHhCcEEEECccccccCccHHHHHHhc
Confidence 999999999999999999999999999999999999999999999999999999999999999999999 455
Q ss_pred CCCCceEEEecccccccccCCCceeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHhhhhccCCHHHHHHHHHHHHH
Q 044635 452 SPKKSMLVVSEFIGCSPSLSGAIRVNPWNIDAVSDAMDSALEMADQEKQLRHEKHYRYVSTHDVGYWARSFLQDLE 527 (831)
Q Consensus 452 ~~~~g~lVlSe~~G~~~~l~~allVnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l~ 527 (831)
.+..|++|+|+++|+++++.+|++|||+|++++|+||.++|+|+.+||+.|+++++++|.+||+.+|+++|+.+|.
T Consensus 380 ~P~~g~vVlS~~~G~~~~l~~gllVnP~d~~~lA~aI~~aL~~~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l~ 455 (456)
T TIGR02400 380 DPKDGVLILSEFAGAAQELNGALLVNPYDIDGMADAIARALTMPLEEREERHRAMMDKLRKNDVQRWREDFLSDLN 455 (456)
T ss_pred CCCCceEEEeCCCCChHHhCCcEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHhh
Confidence 5556889999999999999999999999999999999999999999999999999999999999999999999874
No 11
>cd03788 GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a glycosyltransferase that catalyses the synthesis of alpha,alpha-1,1-trehalose-6-phosphate from glucose-6-phosphate using a UDP-glucose donor. It is a key enzyme in the trehalose synthesis pathway. Trehalose is a nonreducing disaccharide present in a wide variety of organisms and may serve as a source of energy and carbon. It is characterized most notably in insect, plant, and microbial cells. Its production is often associated with a variety of stress conditions, including desiccation, dehydration, heat, cold, and oxidation. This family represents the catalytic domain of the TPS. Some members of this domain family coexist with a C-terminal trehalose phosphatase domain.
Probab=100.00 E-value=2.8e-94 Score=825.94 Aligned_cols=451 Identities=46% Similarity=0.790 Sum_probs=416.1
Q ss_pred cEEEEEcCCccceeecCCCCCCeEEeeCCCchHHHhhhccCCCCCCeEEEeccCCcCCcchhhhHhHhhccCeeEEEEeC
Q 044635 61 RIIIVANQLPIRAQRKSDNSKGWIFSWDENSLLLQLKDGLGDDDIEVIYVGCLKEEIHVNEQDEVSQILLDTFKCVPTFL 140 (831)
Q Consensus 61 r~iivsnrlP~~~~~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~wvG~~~~~~~~~~~~~~~~~~~~~~~~~pv~l 140 (831)
|+||||||+|+.+.++++ |.|+++++.|||+.+|.+.+.+ .+++||||++.+.+..+...+.+....+|+|+|||+
T Consensus 1 ~li~vsnr~p~~~~~~~~--~~~~~~~~~ggl~~~l~~~~~~--~~~~wvg~~~~~~~~~~~~~~~~~~~~~~~~~~v~l 76 (460)
T cd03788 1 RLVVVSNRLPVSIERDGD--GEFEARRSAGGLATALKGLLKR--TGGLWVGWSGIEEDEEEEDEVSTELLGEYTVAPVFL 76 (460)
T ss_pred CEEEEECCCCceeEEcCC--CceEeccCCCcHHHHHHHHHhc--CCeEEEEeCCCCCCcccchhhhhhhcCCceEEEeeC
Confidence 689999999999998765 5899999999999999876554 699999999987665444345556678999999999
Q ss_pred ChHhhhhHhhhhhccccccccccCCCCCCCCCCccChhhHHHHHHHHHHHHHHHHHHcCCCCCEEEEeCccccchHHHHH
Q 044635 141 PPDLFSRYYHGFCKQQLWPLFHYMLPLSPDLGGRFNRSLWQAYVSVNKIFADRIMEVINPEDDFVWVHDYHLMVLPTFLR 220 (831)
Q Consensus 141 ~~~~~~~~y~gf~~~~lWp~~H~~~~~~~~~~~~~~~~~w~~Y~~vN~~fa~~i~~~~~~~~d~vwvhDyhL~llp~~lr 220 (831)
++++++.||+||||++|||+|||+.+. .+|++++|++|++||++||++|++.+++ +|+||||||||+++|.+||
T Consensus 77 ~~~~~~~~y~~f~~~~LWp~~H~~~~~-----~~~~~~~w~~Y~~vN~~fa~~i~~~~~~-~d~iwihDyhl~llp~~lr 150 (460)
T cd03788 77 SPEEFEGYYNGFSNEVLWPLFHYRLDL-----ARFDREDWEAYVRVNRKFADAIAEVLRP-GDLVWVHDYHLLLLPQMLR 150 (460)
T ss_pred CHHHHHHHHHHhhhhhcchhhcCCCCc-----cccCHHHHHHHHHHHHHHHHHHHHhcCC-CCEEEEeChhhhHHHHHHH
Confidence 999999999999999999999999876 5899999999999999999999999997 5999999999999999999
Q ss_pred hhcCCCeEEEEEeccCCChHHhhcCCChHHHHHHHhcCCeEeecCHHhHHHHHHHHHHHhCCeecccCceeeEEEcCEEE
Q 044635 221 KRFNRVKLGFFLHSPFPSSEIYKTLPIREEILRALLNSDLIGFHTFDYARHFLSCCSRMLGLTYESKRGYIGLEYYGRTV 300 (831)
Q Consensus 221 ~~~~~~~i~~flH~PfP~~e~f~~lp~r~eil~~ll~~dligf~t~~~~~~Fl~~~~r~l~~~~~~~~~~~~~~~~gr~~ 300 (831)
++.++++||||||||||++|+|+++|+|++|+++||+||+|||||++|++||+++|+++++++.... ..+.++|+.+
T Consensus 151 ~~~~~~~i~~f~HipfP~~e~~~~lp~~~~ll~~~l~~D~igF~t~~~~~~Fl~~~~~~l~~~~~~~---~~i~~~g~~~ 227 (460)
T cd03788 151 ERGPDARIGFFLHIPFPSSEIFRCLPWREELLRGLLGADLIGFQTERYARNFLSCCSRLLGLEVTDD---GGVEYGGRRV 227 (460)
T ss_pred hhCCCCeEEEEEeCCCCChHHHhhCCChHHHHHHHhcCCEEEECCHHHHHHHHHHHHHHcCCcccCC---ceEEECCEEE
Confidence 9999999999999999999999999999999999999999999999999999999999999886542 3688999999
Q ss_pred EEEEeecccChHHHHHhhCCcchHHHHHHHHHHhccCCcEEEEeccCcccccCHHHHHHHHHHHHHhCCCCCCcEEEEEE
Q 044635 301 SIKILPVGIHMGQLQSVLSLPGTEAKVSELIKQFHDQGKVMLLGVDDMDIFKGISLKLLAMEQLLIQHPEWQGKVVLVQI 380 (831)
Q Consensus 301 ~i~v~P~GId~~~~~~~~~~~~~~~~~~~lr~~~~~~~~~iil~VdRld~~KGi~~~l~A~~~lL~~~P~~~~~vvLvqi 380 (831)
+|.++|+|||++.|......+......++++..+ +++++|++|||+++.||+..+|+||+++++++|+++++++|+||
T Consensus 228 ~i~vip~GID~~~f~~~~~~~~~~~~~~~~~~~~--~~~~~il~vgRl~~~Kgi~~ll~A~~~ll~~~p~~~~~v~Lv~v 305 (460)
T cd03788 228 RVGAFPIGIDPDAFRKLAASPEVQERAAELRERL--GGRKLIVGVDRLDYSKGIPERLLAFERLLERYPEWRGKVVLVQI 305 (460)
T ss_pred EEEEEeCeEcHHHHHHHhcCchhHHHHHHHHHhc--CCCEEEEEecCccccCCHHHHHHHHHHHHHhChhhcCCEEEEEE
Confidence 9999999999999988766666655556666666 78999999999999999999999999999999999999999999
Q ss_pred ecCCCCCchhHHHHHHHHHHHHHHHhccCCCCCCccEEEecCCCCHHHHHHHHHHcCEeEECCCccCC--------CCCC
Q 044635 381 ANPARGRGKDVKEVQAETYSTVERINQTFGKPGYDPVVLIDEPLKFYERIAYYVVAECCLVTAVRDGS--------EPSS 452 (831)
Q Consensus 381 g~p~r~~~~~~~~l~~~i~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv~vvtS~~eGm--------a~~~ 452 (831)
|.|+|+++++++++++++++++++||.+||..+|.||+++.+.++.+++.++|++|||||+||++||| +|..
T Consensus 306 g~~~~g~~~~~~~l~~~l~~~v~~in~~~g~~~~~~v~~~~g~v~~~el~~~y~~aDv~v~pS~~Eg~~lv~lEAma~g~ 385 (460)
T cd03788 306 AVPSRTDVPEYQELRREVEELVGRINGKFGTLDWTPVRYLYRSLPREELAALYRAADVALVTPLRDGMNLVAKEYVACQD 385 (460)
T ss_pred ccCCCcCcHHHHHHHHHHHHHHHHHHhccCCCCceeEEEEeCCCCHHHHHHHHHhccEEEeCccccccCcccceeEEEec
Confidence 99999999999999999999999999999998999999999999999999999999999999999999 3333
Q ss_pred CCCceEEEecccccccccCCCceeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHhhhhccCCHHHHHHHHHHHH
Q 044635 453 PKKSMLVVSEFIGCSPSLSGAIRVNPWNIDAVSDAMDSALEMADQEKQLRHEKHYRYVSTHDVGYWARSFLQDL 526 (831)
Q Consensus 453 ~~~g~lVlSe~~G~~~~l~~allVnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l 526 (831)
+++|++|+|+++|+++++.+|++|||+|++++|++|.++|+|+++|++.+++++++++.++++..|+++|+++|
T Consensus 386 p~~g~vV~S~~~G~~~~~~~g~lv~p~d~~~la~ai~~~l~~~~~e~~~~~~~~~~~v~~~~~~~w~~~~l~~l 459 (460)
T cd03788 386 DDPGVLILSEFAGAAEELSGALLVNPYDIDEVADAIHRALTMPLEERRERHRKLREYVRTHDVQAWANSFLDDL 459 (460)
T ss_pred CCCceEEEeccccchhhcCCCEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHhh
Confidence 45677999999999999889999999999999999999999999999999999999999999999999999987
No 12
>COG1877 OtsB Trehalose-6-phosphatase [Carbohydrate transport and metabolism]
Probab=100.00 E-value=7.6e-35 Score=303.97 Aligned_cols=248 Identities=29% Similarity=0.450 Sum_probs=214.0
Q ss_pred CHHHHHHHHHhcCceeEEecCCCccCCCCC--CCCCCCHHHHHHHHHHhhcCCCeEEEECCCCHhhHHHHhCCCCCceEE
Q 044635 560 SMEHIVSAYKRTTTRAILLDYDGTLMPQAS--IDKSPNSKTIDILNSLCRDKNNMVFLVSAKSRKTLAEWFSPCENLGIA 637 (831)
Q Consensus 560 ~~~~~~~~y~~s~~rli~~D~DGTLl~~~~--~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~~~~~~li 637 (831)
....+.+.|..+++++||+||||||++... ....|+++++++|++|+++++|.|+|+|||+...++.|++ +++++++
T Consensus 5 ~~~~~~~~~~~a~~~~~~lDyDGTl~~i~~~p~~a~~~~~l~~lL~~Las~~~~~v~iiSGR~~~~l~~~~~-v~~i~l~ 83 (266)
T COG1877 5 QSNQLLEPYLNARKRLLFLDYDGTLTEIVPHPEAAVPDDRLLSLLQDLASDPRNVVAIISGRSLAELERLFG-VPGIGLI 83 (266)
T ss_pred hhhhhccccccccceEEEEeccccccccccCccccCCCHHHHHHHHHHHhcCCCeEEEEeCCCHHHHHHhcC-CCCccEE
Confidence 445677889999999999999999998543 3456899999999999999999999999999999999998 8899999
Q ss_pred ecCCEEEEeCCCceEEEcCCcCCccHHHHHHHHHHHHhccCCCeeEeeccceEEEeeccCCCccchHHHHHHHHHHHhHh
Q 044635 638 AEHGYFFRLRRDEEWETCIPVADCGWKQIAEPVMKLYTETTDGSTIEDKETALVWSYEDADPDFGSCQAKELLDHLESVL 717 (831)
Q Consensus 638 aenGa~i~~~~~~~w~~~~~~~~~~w~~~v~~il~~~~e~~~gs~ie~k~~~l~~~~~~~d~~~~~~~a~el~~~L~~~l 717 (831)
|+||++++..++.-|+......+..|++.+..++++|.+++||+++|.|++++.|||++++++....++........
T Consensus 84 aehGa~~r~~~g~~~~~~~~~~~~~~~~~v~~~l~~~v~r~pGs~iE~K~~a~~~Hyr~a~~~~~~~~a~~~~~~~~--- 160 (266)
T COG1877 84 AEHGAEVRDPNGKWWINLAEEADLRWLKEVAAILEYYVERTPGSYIERKGFAVALHYRNAEDDEGAALALAEAATLI--- 160 (266)
T ss_pred EecceEEecCCCCeeEecCHHHHhhHHHHHHHHHHHHhhcCCCeEEEEcCcEEEEeeccCCchhhHHHHHHHHHhcc---
Confidence 99999999888888887776777889999999999999999999999999999999999987765433333222222
Q ss_pred cCCC-eEEEEcCeEEEEEeCCCCHHHHHHHHHHHhhhcCCCcccEEEEcCCchhHHHHHHcchhcCCCCCCCCCceEEEE
Q 044635 718 ANEP-VTVKSGQNLVEVKPQGVNKGLVAKRLLSTMQEREMLPDFVLCVGDDRSDEDMFEVIISSMAGPSIAPRAEVFACT 796 (831)
Q Consensus 718 ~~~~-v~v~~g~~~vEV~p~gvnKG~al~~Ll~~l~~~g~~~d~vla~GD~~NDe~Mf~~a~~~~~~~~~~~~~~~~~v~ 796 (831)
+.. +.++.|+..||++|.++|||.+++++++.. ....++++|.|||.+||+||++++.+. .+++.
T Consensus 161 -~~~~~~v~~gk~vVEvrp~~~~KG~a~~~i~~~~---~~~~~~~~~aGDD~TDE~~F~~v~~~~----------~~~v~ 226 (266)
T COG1877 161 -NELKLRVTPGKMVVELRPPGVSKGAAIKYIMDEL---PFDGRFPIFAGDDLTDEDAFAAVNKLD----------SITVK 226 (266)
T ss_pred -ccccEEEEeCceEEEEeeCCcchHHHHHHHHhcC---CCCCCcceecCCCCccHHHHHhhccCC----------CceEE
Confidence 222 889999999999999999999999999986 444468999999999999999998642 26899
Q ss_pred eCCCCcccceEeCChhHHHHHHHHHHhhh
Q 044635 797 VGRKPSKAKYYLDDTVEIVRLMQGLACVA 825 (831)
Q Consensus 797 vG~~~s~A~y~l~d~~eV~~~L~~L~~~~ 825 (831)
+|.+.+.|++.+.++......|.++....
T Consensus 227 v~~~~t~a~~~~~~~~~~~~~l~~~~~~~ 255 (266)
T COG1877 227 VGVGSTQAKFRLAGVYGFLRSLYKLLEAL 255 (266)
T ss_pred ecCCcccccccccccHHHHHHHHHHHHHh
Confidence 99999999999999999999998887654
No 13
>PF02358 Trehalose_PPase: Trehalose-phosphatase; InterPro: IPR003337 Trehalose-phosphatases 3.1.3.12 from EC catalyse the de-phosphorylation of trehalose-6-phosphate to trehalose and orthophosphate. Trehalose is a common disaccharide of bacteria, fungi and invertebrates that appears to play a major role in desiccation tolerance. A pathway for trehalose biosynthesis may also exist in plants []. The trehalose-phosphatase signature is found in the C terminus of trehalose-6-phosphate synthase 2.4.1.15 from EC adjacent to the trehalose-6-phosphate synthase domain (see IPR001830 from INTERPRO). It would appear that the two equivalent genes in the Escherichia coli otsBA operon: otsA, the trehalose-6-phosphate synthase and otsB, trehalose-phosphatase (this family) have undergone gene fusion in most eukaryotes [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1U02_A.
Probab=100.00 E-value=2e-35 Score=310.36 Aligned_cols=227 Identities=40% Similarity=0.655 Sum_probs=154.1
Q ss_pred EecCCCccCCCCC--CCCCCCHHHHHHHHHHhhcCCCeEEEECCCCHhhHHHHhCCCCCceEEecCCEEEEeCCCceEEE
Q 044635 577 LLDYDGTLMPQAS--IDKSPNSKTIDILNSLCRDKNNMVFLVSAKSRKTLAEWFSPCENLGIAAEHGYFFRLRRDEEWET 654 (831)
Q Consensus 577 ~~D~DGTLl~~~~--~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~~~~~~liaenGa~i~~~~~~~w~~ 654 (831)
|+||||||.+..+ ....++++++++|++|+++++|.|+|+|||+...+ +.+..+++++++|+||++++.+++..|..
T Consensus 1 ~lDyDGTL~p~~~~p~~~~~~~~~~~~L~~La~~~~~~v~IvSGR~~~~~-~~~~~~~~i~l~gehG~e~~~~~~~~~~~ 79 (235)
T PF02358_consen 1 FLDYDGTLAPIVDDPDAAVPPPELRELLRALAADPNNTVAIVSGRSLDDL-ERFGGIPNIGLAGEHGAEIRRPGGSEWTN 79 (235)
T ss_dssp EEE-TTTSS---S-GGG----HHHHHHHHHHHHHSE--EEEE-SS-HHHH-HHH-S-SS-EEEEGGGTEEEETTE-EEE-
T ss_pred CcccCCccCCCCCCccccCCCHHHHHHHHHHhccCCCEEEEEEeCCHHHh-HHhcCCCCceEEEEeeEEeccCccccccc
Confidence 7999999999654 34578899999999999999999999999999994 45556789999999999999998888886
Q ss_pred cCCcCCccHHHHHHHHHHHHhccCCCeeEeeccceEEEeeccCCCccchHHHHHHHHHHHhHhcCC-CeEEEEcCeEEEE
Q 044635 655 CIPVADCGWKQIAEPVMKLYTETTDGSTIEDKETALVWSYEDADPDFGSCQAKELLDHLESVLANE-PVTVKSGQNLVEV 733 (831)
Q Consensus 655 ~~~~~~~~w~~~v~~il~~~~e~~~gs~ie~k~~~l~~~~~~~d~~~~~~~a~el~~~L~~~l~~~-~v~v~~g~~~vEV 733 (831)
.....+..|++.+.++++++.++++|+++|.|+++++|||++++++++..++.++.+++.+.+... ++.+..|+.+|||
T Consensus 80 ~~~~~~~~~~~~~~~~l~~~~~~~pG~~iE~K~~sv~~Hyr~~~~~~~~~~~~~l~~~l~~~~~~~~~~~v~~g~~~vEv 159 (235)
T PF02358_consen 80 LPADEDLEWKDEVREILEYFAERTPGSFIEDKEFSVAFHYRNAPPEFGEAQARELAEQLREILASHPGLEVVPGKKVVEV 159 (235)
T ss_dssp TTGGGGHHHHHHHHHHHTTHHHHSTT-EEEEETTEEEEE-TTS-ST----THHHHHHHHHHHHHHH-T-EEEE-SSEEEE
T ss_pred cccccchHHHHHHHHHHHHHHhhccCcEEEECCeEEEEEecCCCcchhhhHHHHHHHHHHHHHHhCCCEEEEECCCEEEE
Confidence 555556789999999999999999999999999999999999999999889999999999977664 8999999999999
Q ss_pred EeCCCCHHHHHHHHHHHhhhcCCCcccEEEEcCCchhHHHHHHcchhcCCCCCCCCCceEEEEeC-----CCCcccceEe
Q 044635 734 KPQGVNKGLVAKRLLSTMQEREMLPDFVLCVGDDRSDEDMFEVIISSMAGPSIAPRAEVFACTVG-----RKPSKAKYYL 808 (831)
Q Consensus 734 ~p~gvnKG~al~~Ll~~l~~~g~~~d~vla~GD~~NDe~Mf~~a~~~~~~~~~~~~~~~~~v~vG-----~~~s~A~y~l 808 (831)
+|.+++||.|+++|++.+...+..+++++|+|||.+||+||++++... ...+++.|| .++|.|+|+|
T Consensus 160 rp~~~~KG~av~~ll~~~~~~~~~~~~~l~~GDD~tDE~~f~~~~~~~--------~~~~~i~V~~~~~~~~~t~A~y~l 231 (235)
T PF02358_consen 160 RPPGVNKGSAVRRLLEELPFAGPKPDFVLYIGDDRTDEDAFRALRELE--------EGGFGIKVGSVSVGEKPTAASYRL 231 (235)
T ss_dssp E-TT--HHHHHHHHHTTS---------EEEEESSHHHHHHHHTTTTS------------EEEEES---------------
T ss_pred EeCCCChHHHHHHHHHhcCccccccceeEEecCCCCCHHHHHHHHhcc--------cCCCCeEEEeeccccccccccccc
Confidence 999999999999999987333344789999999999999999998631 112455555 4679999999
Q ss_pred CChh
Q 044635 809 DDTV 812 (831)
Q Consensus 809 ~d~~ 812 (831)
+|+.
T Consensus 232 ~~p~ 235 (235)
T PF02358_consen 232 DDPS 235 (235)
T ss_dssp ----
T ss_pred ccCC
Confidence 9863
No 14
>TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant. Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein.
Probab=100.00 E-value=8.8e-32 Score=322.56 Aligned_cols=536 Identities=15% Similarity=0.143 Sum_probs=321.2
Q ss_pred CEEEEeCccccchHHHHHhhcCCCeEEEEEeccCCChHHhh-----------------cCCChHHH-HHHHhcCCeEeec
Q 044635 203 DFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYK-----------------TLPIREEI-LRALLNSDLIGFH 264 (831)
Q Consensus 203 d~vwvhDyhL~llp~~lr~~~~~~~i~~flH~PfP~~e~f~-----------------~lp~r~ei-l~~ll~~dligf~ 264 (831)
|+|.-|+++--.+...|++++ ++|..++.|+- ..+-++ .++.|-+. -..+-.||.|.-.
T Consensus 312 DvIHaHyw~sG~aa~~L~~~l-gVP~V~T~HSL--gr~K~~~ll~~g~~~~~~~~~~y~~~~Ri~~Ee~~l~~Ad~VIas 388 (1050)
T TIGR02468 312 YVIHGHYADAGDSAALLSGAL-NVPMVLTGHSL--GRDKLEQLLKQGRMSKEEINSTYKIMRRIEAEELSLDASEIVITS 388 (1050)
T ss_pred CEEEECcchHHHHHHHHHHhh-CCCEEEECccc--hhhhhhhhcccccccccccccccchHHHHHHHHHHHHhcCEEEEe
Confidence 899999888888888887766 68999999963 111111 11222121 3346678999888
Q ss_pred CHHhHHHHHHHH-------HHHhCCeecccCceeeEEEcCE-EEEEEEeecccChHHHHHhhCCcch-------------
Q 044635 265 TFDYARHFLSCC-------SRMLGLTYESKRGYIGLEYYGR-TVSIKILPVGIHMGQLQSVLSLPGT------------- 323 (831)
Q Consensus 265 t~~~~~~Fl~~~-------~r~l~~~~~~~~~~~~~~~~gr-~~~i~v~P~GId~~~~~~~~~~~~~------------- 323 (831)
|......-...- .|.|.. ...+ ++.++|+ .-++.|+|+|||+++|.+.......
T Consensus 389 T~qE~~eq~~lY~~~~~~~~~~~~~--~~~~---gv~~~g~~~~ri~VIPpGVD~~~F~P~~~~~~~~~~~~~~~~~~~~ 463 (1050)
T TIGR02468 389 TRQEIEEQWGLYDGFDVILERKLRA--RARR---GVSCYGRFMPRMAVIPPGMEFSHIVPHDGDMDGETEGNEEHPAKPD 463 (1050)
T ss_pred CHHHHHHHHHHhccCCchhhhhhhh--hhcc---cccccccCCCCeEEeCCCCcHHHccCCCccccchhccccccccccc
Confidence 876665432110 011111 0111 2333333 2388999999999999753211100
Q ss_pred HHHHHHHHHHhccCCcEEEEeccCcccccCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhH----HHHHHHHH
Q 044635 324 EAKVSELIKQFHDQGKVMLLGVDDMDIFKGISLKLLAMEQLLIQHPEWQGKVVLVQIANPARGRGKDV----KEVQAETY 399 (831)
Q Consensus 324 ~~~~~~lr~~~~~~~~~iil~VdRld~~KGi~~~l~A~~~lL~~~P~~~~~vvLvqig~p~r~~~~~~----~~l~~~i~ 399 (831)
.....+++..+..+++++||+|||+++.||+..+|+||..+.+..+.. ++.+ ++|... ..... ..+..++.
T Consensus 464 ~~~~~~l~r~~~~pdkpvIL~VGRL~p~KGi~~LIeAf~~L~~l~~~~--nL~L-IiG~gd--d~d~l~~~~~~~l~~L~ 538 (1050)
T TIGR02468 464 PPIWSEIMRFFTNPRKPMILALARPDPKKNITTLVKAFGECRPLRELA--NLTL-IMGNRD--DIDEMSSGSSSVLTSVL 538 (1050)
T ss_pred chhhHHHHhhcccCCCcEEEEEcCCccccCHHHHHHHHHHhHhhccCC--CEEE-EEecCc--hhhhhhccchHHHHHHH
Confidence 011223444333567899999999999999999999999986543321 2333 456321 11110 12334555
Q ss_pred HHHHHHhccCCCCCCccEEEecCCCCHHHHHHHHHHc----CEeEECCCccCCC---CCCCC-CceEEEeccccccccc-
Q 044635 400 STVERINQTFGKPGYDPVVLIDEPLKFYERIAYYVVA----ECCLVTAVRDGSE---PSSPK-KSMLVVSEFIGCSPSL- 470 (831)
Q Consensus 400 ~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~A----Dv~vvtS~~eGma---~~~~~-~g~lVlSe~~G~~~~l- 470 (831)
.++.+.+ ....+.|.++++++++.++|+.| |+||+||++|||. .+++. +.|+|+|...|..+.+
T Consensus 539 ~li~~lg-------L~g~V~FlG~v~~edvp~lYr~Ad~s~DVFV~PS~~EgFGLvlLEAMAcGlPVVASdvGG~~EII~ 611 (1050)
T TIGR02468 539 KLIDKYD-------LYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPMVATKNGGPVDIHR 611 (1050)
T ss_pred HHHHHhC-------CCCeEEecCCCCHHHHHHHHHHhhhcCCeeeCCcccCCCCHHHHHHHHhCCCEEEeCCCCcHHHhc
Confidence 5555532 22345567889999999999998 6999999999982 13333 4578888887777766
Q ss_pred --CCCceeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHhhh-cccc-----c--
Q 044635 471 --SGAIRVNPWNIDAVSDAMDSALEMADQEKQLRHEKHYRYVSTHDVGYWARSFLQDLERTCREHVR-QRCW-----G-- 540 (831)
Q Consensus 471 --~~allVnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l~~~~~~~~~-~~~~-----~-- 540 (831)
.+|++|+|.|++++|++|.++|+. ++.++...+..++.+.++++...++++++.+......+.. ++.. .
T Consensus 612 ~g~nGlLVdP~D~eaLA~AL~~LL~D-pelr~~m~~~gr~~v~~FSWe~ia~~yl~~i~~~~~~~~~~~~~~~~~~~~~~ 690 (1050)
T TIGR02468 612 VLDNGLLVDPHDQQAIADALLKLVAD-KQLWAECRQNGLKNIHLFSWPEHCKTYLSRIASCRPRHPQWQRDTDDGEEASE 690 (1050)
T ss_pred cCCcEEEECCCCHHHHHHHHHHHhhC-HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHhccCccccccccccccccc
Confidence 479999999999999999999974 4445555566777888899999999999888776544311 0000 0
Q ss_pred ---cC--------cCcceeEeecCccccc----------CCH----HHHHHH-----------------------HH--h
Q 044635 541 ---IG--------FGLSFRVVALDPNFKK----------LSM----EHIVSA-----------------------YK--R 570 (831)
Q Consensus 541 ---~~--------~g~~~~~~~~~~~f~~----------l~~----~~~~~~-----------------------y~--~ 570 (831)
.+ ..|++.+ |-.... ++. ..+..+ |. +
T Consensus 691 ~~~~~~~~~~~~~~~l~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 767 (1050)
T TIGR02468 691 DESPGDSLRDIQDISLNLSV---DGDKESNNGSSNVEGSGPPADRVAKIENAVRSWSKSPKGSSAKAQQGSGAGKYPALR 767 (1050)
T ss_pred ccCccccccccccchhhccc---cccccccccccccccccchhhHHHHHHHHHhhccccccccccccccccccccCcccc
Confidence 01 0111110 000000 000 011111 11 1
Q ss_pred cCceeEE--ecCCCccCCCCCCCCCCCHHHHHHHHHHhh---cCCCeEEEECCCCHhhHHHHhCC--CC---CceEEecC
Q 044635 571 TTTRAIL--LDYDGTLMPQASIDKSPNSKTIDILNSLCR---DKNNMVFLVSAKSRKTLAEWFSP--CE---NLGIAAEH 640 (831)
Q Consensus 571 s~~rli~--~D~DGTLl~~~~~~~~~s~~~~~~L~~L~~---d~g~~V~I~SGR~~~~l~~~~~~--~~---~~~liaen 640 (831)
..+++|+ +|+|+| +. ..+.+.++++.+.+ .....++++|||+...+...+.. ++ ...+||.-
T Consensus 768 ~~~~~~via~D~d~~-~~-------~~~~l~~~~~~~~~~~~~~~igfv~aTGR~l~~~~~~l~~~~lp~~~PD~lI~~v 839 (1050)
T TIGR02468 768 RRKRLFVIAVDCYDD-KD-------LLQIIKNIFEAVRKERMEGSSGFILSTSMTISEIQSFLKSGGLNPTDFDALICNS 839 (1050)
T ss_pred ccceEEEEEeccCCC-CC-------hHHHHHHHHHHHhccccCCceEEEEEcCCCHHHHHHHHHhCCCCCCCCCEEEeCC
Confidence 1256666 999999 32 12333344444432 23467899999999999998854 33 56899999
Q ss_pred CEEEEeCC-----CceEEEc---CCcCCccHH-HHHHHHHHHHhcc--------CCCeeEeeccce--EEEeeccCCCcc
Q 044635 641 GYFFRLRR-----DEEWETC---IPVADCGWK-QIAEPVMKLYTET--------TDGSTIEDKETA--LVWSYEDADPDF 701 (831)
Q Consensus 641 Ga~i~~~~-----~~~w~~~---~~~~~~~w~-~~v~~il~~~~e~--------~~gs~ie~k~~~--l~~~~~~~d~~~ 701 (831)
|+.|+++. +..|..- ....+..|. +.+...+..+... .++...+..+.. ....|.-.|++.
T Consensus 840 GTeIyy~~~~~~~~~~~~~D~~w~~hI~~rW~ge~~r~~L~~l~~~~~~~~~~~~~~l~~Q~~~~q~~~k~SY~v~d~~~ 919 (1050)
T TIGR02468 840 GSELYYPSLNGSEEGKLVADQDYHSHIEYRWGGEGLRKTLVKWAASINEKKGENEEQIVEEDEESSTDHCYAFKVKDPSK 919 (1050)
T ss_pred CcceeccCcCCCCCCCceECHHHHHHHHccCCcHHHHHHHHHHhhhcccccccccccceecChhhCCCceEEEEecCccc
Confidence 99999862 1222210 011235673 3455555444331 122233322211 222232113321
Q ss_pred chHHHHHHHHHHHhHhcCCCeE-EEE-cCeEEEEEeCCCCHHHHHHHHHHHhhhcCCCcccEEE-EcCCch-h-HHHHHH
Q 044635 702 GSCQAKELLDHLESVLANEPVT-VKS-GQNLVEVKPQGVNKGLVAKRLLSTMQEREMLPDFVLC-VGDDRS-D-EDMFEV 776 (831)
Q Consensus 702 ~~~~a~el~~~L~~~l~~~~v~-v~~-g~~~vEV~p~gvnKG~al~~Ll~~l~~~g~~~d~vla-~GD~~N-D-e~Mf~~ 776 (831)
. ...+++.+.|... ..... +++ +..+++|.|..+|||.|+++|..++ |++.+++++ +||+.| | ++|+.-
T Consensus 920 ~-~~v~elr~~Lr~~--gLr~~~iys~~~~~LDVlP~~ASKgqAlRyL~~rw---gi~l~~v~VfaGdSGntD~e~Ll~G 993 (1050)
T TIGR02468 920 V-PPVKELRKLLRIQ--GLRCHAVYCRNGTRLNVIPLLASRSQALRYLFVRW---GIELANMAVFVGESGDTDYEGLLGG 993 (1050)
T ss_pred C-ccHHHHHHHHHhC--CCceEEEeecCCcEeeeeeCCCCHHHHHHHHHHHc---CCChHHeEEEeccCCCCCHHHHhCC
Confidence 1 1245555555542 22222 333 4599999999999999999999999 999999955 999999 9 556543
No 15
>PLN03017 trehalose-phosphatase
Probab=100.00 E-value=3.3e-33 Score=302.81 Aligned_cols=242 Identities=24% Similarity=0.337 Sum_probs=195.5
Q ss_pred HHHhcCceeEEecCCCccCCCCC-CCC-CCCHHHHHHHHHHhhcCCCeEEEECCCCHhhHHHHhCCCCCceEEecCCEEE
Q 044635 567 AYKRTTTRAILLDYDGTLMPQAS-IDK-SPNSKTIDILNSLCRDKNNMVFLVSAKSRKTLAEWFSPCENLGIAAEHGYFF 644 (831)
Q Consensus 567 ~y~~s~~rli~~D~DGTLl~~~~-~~~-~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~~~~~~liaenGa~i 644 (831)
++.+.+..+||+||||||+|..+ .+. .++++++++|++|++ +..|+|+|||++..+.++++ +.+++++++||+++
T Consensus 105 ~~~~~k~~llflD~DGTL~Piv~~p~~a~i~~~~~~aL~~La~--~~~vaIvSGR~~~~l~~~~~-l~~l~l~g~hGa~i 181 (366)
T PLN03017 105 EASRGKQIVMFLDYDGTLSPIVDDPDKAFMSSKMRRTVKKLAK--CFPTAIVTGRCIDKVYNFVK-LAELYYAGSHGMDI 181 (366)
T ss_pred HHhcCCCeEEEEecCCcCcCCcCCcccccCCHHHHHHHHHHhc--CCcEEEEeCCCHHHHHHhhc-ccCceEEEcCCcEE
Confidence 33456889999999999997554 233 799999999999984 78999999999999999965 46789999999999
Q ss_pred EeCCCceEEE-------cCCcCCccHHHHHHHH---HHHHhccCCCeeEeeccceEEEeeccCCCccchHHHHHHHHHHH
Q 044635 645 RLRRDEEWET-------CIPVADCGWKQIAEPV---MKLYTETTDGSTIEDKETALVWSYEDADPDFGSCQAKELLDHLE 714 (831)
Q Consensus 645 ~~~~~~~w~~-------~~~~~~~~w~~~v~~i---l~~~~e~~~gs~ie~k~~~l~~~~~~~d~~~~~~~a~el~~~L~ 714 (831)
+.+++. |.. ........|...+.++ ++.+++++||+++|.|.++++||||++++.. +.++..++.
T Consensus 182 ~~p~~~-~~~~~~~~~~~~~~~~~~~~~~i~~v~~~L~~~~~~~pGa~VE~K~~~vavHyR~ad~~~----~~~l~~~~~ 256 (366)
T PLN03017 182 KGPAKG-FSRHKRVKQSLLYQPANDYLPMIDEVYRQLLEKTKSTPGAKVENHKFCASVHFRCVDEKK----WSELVLQVR 256 (366)
T ss_pred ecCCCc-ceeccccccccccccchhhHHHHHHHHHHHHHHHhcCCCCEEEecCcEEEEEcCcCCHHH----HHHHHHHHH
Confidence 876542 221 1111234577766666 5556779999999999999999999997642 467777788
Q ss_pred hHhcCCC-eEEEEcCeEEEEEeC-CCCHHHHHHHHHHHhhhcCCCcccEEEEcCCchhHHHHHHcchhcCCCCCCCCCce
Q 044635 715 SVLANEP-VTVKSGQNLVEVKPQ-GVNKGLVAKRLLSTMQEREMLPDFVLCVGDDRSDEDMFEVIISSMAGPSIAPRAEV 792 (831)
Q Consensus 715 ~~l~~~~-v~v~~g~~~vEV~p~-gvnKG~al~~Ll~~l~~~g~~~d~vla~GD~~NDe~Mf~~a~~~~~~~~~~~~~~~ 792 (831)
.++.+.+ +.+..|+..+||+|. ++|||.|+++|++.+...+...++++|+|||.+||+||+++... ...
T Consensus 257 ~vl~~~~~l~v~~GkkVlEvRP~~~~dKG~Av~~LL~~l~~~~~~~~~pvyiGDD~TDEDaF~~L~~~---------~~G 327 (366)
T PLN03017 257 SVLKNFPTLKLTQGRKVFEIRPMIEWDKGKALEFLLESLGFGNTNNVFPVYIGDDRTDEDAFKMLRDR---------GEG 327 (366)
T ss_pred HHHHhCCCcEEeCCCeEEEecCCCCCCHHHHHHHHHHhcccccCCCceEEEeCCCCccHHHHHHHhhc---------CCc
Confidence 8777765 789999999999995 99999999999998732223356899999999999999999642 124
Q ss_pred EEEEeC--CCCcccceEeCChhHHHHHHHHHHhhh
Q 044635 793 FACTVG--RKPSKAKYYLDDTVEIVRLMQGLACVA 825 (831)
Q Consensus 793 ~~v~vG--~~~s~A~y~l~d~~eV~~~L~~L~~~~ 825 (831)
++|.|| .++|.|+|+|+++++|..+|+.|+.-.
T Consensus 328 ~gI~VG~~~k~T~A~y~L~dp~eV~~fL~~L~~~~ 362 (366)
T PLN03017 328 FGILVSKFPKDTDASYSLQDPSEVMDFLARLVEWK 362 (366)
T ss_pred eEEEECCCCCCCcceEeCCCHHHHHHHHHHHHHHH
Confidence 899999 578999999999999999999998753
No 16
>PLN02151 trehalose-phosphatase
Probab=100.00 E-value=3.6e-33 Score=301.70 Aligned_cols=240 Identities=21% Similarity=0.349 Sum_probs=196.0
Q ss_pred HhcCceeEEecCCCccCCCCC--CCCCCCHHHHHHHHHHhhcCCCeEEEECCCCHhhHHHHhCCCCCceEEecCCEEEEe
Q 044635 569 KRTTTRAILLDYDGTLMPQAS--IDKSPNSKTIDILNSLCRDKNNMVFLVSAKSRKTLAEWFSPCENLGIAAEHGYFFRL 646 (831)
Q Consensus 569 ~~s~~rli~~D~DGTLl~~~~--~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~~~~~~liaenGa~i~~ 646 (831)
.+.++++||+||||||+|..+ ....++++++++|++|++ +..|+|+|||++..+.++++ ++.++++++||++++.
T Consensus 94 ~~~~~~ll~lDyDGTL~PIv~~P~~A~~~~~~~~aL~~La~--~~~vaIvSGR~~~~l~~~~~-~~~l~laGsHG~e~~~ 170 (354)
T PLN02151 94 SEGKQIVMFLDYDGTLSPIVDDPDRAFMSKKMRNTVRKLAK--CFPTAIVSGRCREKVSSFVK-LTELYYAGSHGMDIKG 170 (354)
T ss_pred hcCCceEEEEecCccCCCCCCCcccccCCHHHHHHHHHHhc--CCCEEEEECCCHHHHHHHcC-CccceEEEeCCceeec
Confidence 456789999999999998543 334789999999999986 56899999999999999997 5679999999999987
Q ss_pred CC-CceEEE----cCCcCCccHHHHHHHHHHHHh---ccCCCeeEeeccceEEEeeccCCCccchHHHHHHHHHHHhHhc
Q 044635 647 RR-DEEWET----CIPVADCGWKQIAEPVMKLYT---ETTDGSTIEDKETALVWSYEDADPDFGSCQAKELLDHLESVLA 718 (831)
Q Consensus 647 ~~-~~~w~~----~~~~~~~~w~~~v~~il~~~~---e~~~gs~ie~k~~~l~~~~~~~d~~~~~~~a~el~~~L~~~l~ 718 (831)
++ +..|+. .....+..|...+.++++.+. +++||+++|.|.++++||||+++++ +..++..++++++.
T Consensus 171 p~~g~~~~~~~~~~~~~~~~~~~~~i~~v~~~l~~~~~~~pG~~VE~K~~slavHYR~a~~~----~~~~l~~~l~~v~~ 246 (354)
T PLN02151 171 PEQGSKYKKENQSLLCQPATEFLPVINEVYKKLVEKTKSIPGAKVENNKFCASVHFRCVEEN----KWSDLANQVRSVLK 246 (354)
T ss_pred CCCCccccccccccccccchhhHHHHHHHHHHHHHHHhcCCCCEEEecCcEEEEEeCCCChH----HHHHHHHHHHHHHh
Confidence 64 335531 111234578887887776654 6899999999999999999999765 23567777888777
Q ss_pred CCC-eEEEEcCeEEEEEeC-CCCHHHHHHHHHHHhhhcCCCcccEEEEcCCchhHHHHHHcchhcCCCCCCCCCceEEEE
Q 044635 719 NEP-VTVKSGQNLVEVKPQ-GVNKGLVAKRLLSTMQEREMLPDFVLCVGDDRSDEDMFEVIISSMAGPSIAPRAEVFACT 796 (831)
Q Consensus 719 ~~~-v~v~~g~~~vEV~p~-gvnKG~al~~Ll~~l~~~g~~~d~vla~GD~~NDe~Mf~~a~~~~~~~~~~~~~~~~~v~ 796 (831)
+.+ +.+..|+..+||+|. ++|||.|+++|++.+...+...++++|+|||.+||+||+++.... ..+++.
T Consensus 247 ~~~~l~v~~GkkVvEvrP~~~~dKG~Av~~Ll~~~~~~~~~~~~pvyiGDD~TDEDaF~~L~~~~---------~G~gI~ 317 (354)
T PLN02151 247 NYPKLMLTQGRKVLEIRPIIKWDKGKALEFLLESLGYANCTDVFPIYIGDDRTDEDAFKILRDKK---------QGLGIL 317 (354)
T ss_pred hCCCcEEecCCEEEEEeCCCCCCHHHHHHHHHHhcccccCCCCeEEEEcCCCcHHHHHHHHhhcC---------CCccEE
Confidence 766 789999999999995 999999999999987333334568999999999999999986421 126777
Q ss_pred eC--CCCcccceEeCChhHHHHHHHHHHhh
Q 044635 797 VG--RKPSKAKYYLDDTVEIVRLMQGLACV 824 (831)
Q Consensus 797 vG--~~~s~A~y~l~d~~eV~~~L~~L~~~ 824 (831)
|| .++|.|+|+|+++++|..+|+.|+.-
T Consensus 318 Vg~~~k~T~A~y~L~dp~eV~~~L~~L~~~ 347 (354)
T PLN02151 318 VSKYAKETNASYSLQEPDEVMEFLERLVEW 347 (354)
T ss_pred eccCCCCCcceEeCCCHHHHHHHHHHHHHh
Confidence 87 68999999999999999999999874
No 17
>TIGR00685 T6PP trehalose-phosphatase. At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes.
Probab=100.00 E-value=3.2e-33 Score=295.17 Aligned_cols=237 Identities=28% Similarity=0.400 Sum_probs=196.7
Q ss_pred cCceeEEecCCCccCCCCC--CCCCCCHHHHHHHHHHhhcCCCeEEEECCCCHhhHHHHhCCCCCceEEecCCEEEEeCC
Q 044635 571 TTTRAILLDYDGTLMPQAS--IDKSPNSKTIDILNSLCRDKNNMVFLVSAKSRKTLAEWFSPCENLGIAAEHGYFFRLRR 648 (831)
Q Consensus 571 s~~rli~~D~DGTLl~~~~--~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~~~~~~liaenGa~i~~~~ 648 (831)
+++++|++||||||++..+ ....+++++.++|++|++++++.|+|+|||+...+...+ .+++++++++||++++.++
T Consensus 1 ~~~~~l~lD~DGTL~~~~~~p~~~~~~~~~~~~L~~L~~~~~~~v~ivSGR~~~~~~~~~-~~~~~~l~g~hG~~~~~~g 79 (244)
T TIGR00685 1 ARKRAFFFDYDGTLSEIVPDPDAAVVSDRLLTILQKLAARPHNAIWIISGRKFLEKWLGV-KLPGLGLAGEHGCEMKDNG 79 (244)
T ss_pred CCcEEEEEecCccccCCcCCCcccCCCHHHHHHHHHHHhCCCCeEEEEECCChhhccccC-CCCceeEEeecCEEEecCC
Confidence 5789999999999998532 345678999999999999999999999999988877655 3477899999999998633
Q ss_pred Cc-eEEEcCCcCCccHHHHHHHHHHHHhccCCCeeEeeccceEEEeeccC-CCccchHHHHHHHHHHHhHhcCCCeEEEE
Q 044635 649 DE-EWETCIPVADCGWKQIAEPVMKLYTETTDGSTIEDKETALVWSYEDA-DPDFGSCQAKELLDHLESVLANEPVTVKS 726 (831)
Q Consensus 649 ~~-~w~~~~~~~~~~w~~~v~~il~~~~e~~~gs~ie~k~~~l~~~~~~~-d~~~~~~~a~el~~~L~~~l~~~~v~v~~ 726 (831)
.. .|.... .....|++.+.++++++.++ ||+++|.|+.+++|||+.+ |++++..++.++..++. ...++.+..
T Consensus 80 ~~~~~~~~~-~~~~~~~~~~~~l~~~~~~~-pG~~iE~K~~s~~~hyr~a~d~~~~~~~~~~~~~~~~---~~~~~~v~~ 154 (244)
T TIGR00685 80 SCQDWVNLT-EKIPSWKVRANELREEITTR-PGVFIERKGVALAWHYRQAPVPELARFRAKELKEKIL---SFTDLEVMD 154 (244)
T ss_pred Ccceeeech-hhhhhHHHHHHHHHHHHhcC-CCcEEEecceEEEEEeccCCCcHHHHHHHHHHHHHHh---cCCCEEEEE
Confidence 22 454322 22247888899999988887 9999999999999999998 78887777777776654 334688899
Q ss_pred cCeEEEEEeCCCCHHHHHHHHHHHhhhcCCCcccEEEEcCCchhHHHHHHcchhcCCCCCCCCCceEEEEe--CCCCccc
Q 044635 727 GQNLVEVKPQGVNKGLVAKRLLSTMQEREMLPDFVLCVGDDRSDEDMFEVIISSMAGPSIAPRAEVFACTV--GRKPSKA 804 (831)
Q Consensus 727 g~~~vEV~p~gvnKG~al~~Ll~~l~~~g~~~d~vla~GD~~NDe~Mf~~a~~~~~~~~~~~~~~~~~v~v--G~~~s~A 804 (831)
|+.++|++|.++|||.+++++++.+ +..++++++|||+.||++||+.+.... .....++++| |.+++.|
T Consensus 155 g~~~~e~~p~~~~Kg~a~~~~~~~~---~~~~~~~i~iGD~~~D~~~~~~~~~~~------~~~g~~~v~v~~g~~~~~A 225 (244)
T TIGR00685 155 GKAVVELKPRFVNKGEIVKRLLWHQ---PGSGISPVYLGDDITDEDAFRVVNNQW------GNYGFYPVPIGSGSKKTVA 225 (244)
T ss_pred CCeEEEEeeCCCCHHHHHHHHHHhc---ccCCCceEEEcCCCcHHHHHHHHhccc------CCCCeEEEEEecCCcCCCc
Confidence 9999999999999999999999998 788899999999999999999993210 1112478888 8889999
Q ss_pred ceEeCChhHHHHHHHHHH
Q 044635 805 KYYLDDTVEIVRLMQGLA 822 (831)
Q Consensus 805 ~y~l~d~~eV~~~L~~L~ 822 (831)
+|+++++++|..+|+.|+
T Consensus 226 ~~~~~~~~~v~~~L~~l~ 243 (244)
T TIGR00685 226 KFHLTGPQQVLEFLGLLV 243 (244)
T ss_pred eEeCCCHHHHHHHHHHHh
Confidence 999999999999999886
No 18
>PRK10187 trehalose-6-phosphate phosphatase; Provisional
Probab=100.00 E-value=4.6e-33 Score=296.85 Aligned_cols=234 Identities=19% Similarity=0.243 Sum_probs=189.7
Q ss_pred CceeEEecCCCccCCCCC--CCCCCCHHHHHHHHHHhhcCCCeEEEECCCCHhhHHHHhCCCCCceEEecCCEEEEeCCC
Q 044635 572 TTRAILLDYDGTLMPQAS--IDKSPNSKTIDILNSLCRDKNNMVFLVSAKSRKTLAEWFSPCENLGIAAEHGYFFRLRRD 649 (831)
Q Consensus 572 ~~rli~~D~DGTLl~~~~--~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~~~~~~liaenGa~i~~~~~ 649 (831)
+.++|++||||||++..+ ....++++++++|++|++++++.|+|+|||+...+.++++.+ .+.++++||++++..++
T Consensus 13 ~~~li~~D~DGTLl~~~~~p~~~~i~~~~~~~L~~L~~~~g~~v~i~SGR~~~~~~~~~~~~-~~~~i~~nGa~i~~~~~ 91 (266)
T PRK10187 13 ANYAWFFDLDGTLAEIKPHPDQVVVPDNILQGLQLLATANDGALALISGRSMVELDALAKPY-RFPLAGVHGAERRDING 91 (266)
T ss_pred CCEEEEEecCCCCCCCCCCcccccCCHHHHHHHHHHHhCCCCcEEEEeCCCHHHHHHhcCcc-cceEEEeCCCeeecCCC
Confidence 368999999999998432 355789999999999988789999999999999999999865 46799999999987654
Q ss_pred ceEEEcCCcCCccHHHHHHHHHHHHhccCCCeeEeeccceEEEeeccCCCccchHHHHHHHHHHHhHhcCCCeEEEEcCe
Q 044635 650 EEWETCIPVADCGWKQIAEPVMKLYTETTDGSTIEDKETALVWSYEDADPDFGSCQAKELLDHLESVLANEPVTVKSGQN 729 (831)
Q Consensus 650 ~~w~~~~~~~~~~w~~~v~~il~~~~e~~~gs~ie~k~~~l~~~~~~~d~~~~~~~a~el~~~L~~~l~~~~v~v~~g~~ 729 (831)
..+.. ..+.+|.+.+...++.+.++++|+++|.|+.+++|||+.++ +- .....++.+.+.+.+. .+.+.+|+.
T Consensus 92 ~~~~~---~l~~~~~~~i~~~l~~~~~~~pg~~ve~k~~~~~~h~r~~~-~~-~~~~~~l~~~i~~~~~--~~~~~~g~~ 164 (266)
T PRK10187 92 KTHIV---HLPDAIARDISVQLHTALAQLPGAELEAKGMAFALHYRQAP-QH-EDALLALAQRITQIWP--QLALQPGKC 164 (266)
T ss_pred Ceeec---cCChhHHHHHHHHHHHHhccCCCcEEEeCCcEEEEECCCCC-cc-HHHHHHHHHHHHhhCC--ceEEeCCCE
Confidence 33322 23456666677777777888999999999999999998773 21 1122233333333222 366778999
Q ss_pred EEEEEeCCCCHHHHHHHHHHHhhhcCCCcccEEEEcCCchhHHHHHHcchhcCCCCCCCCCceEEEEeCCCCcccceEeC
Q 044635 730 LVEVKPQGVNKGLVAKRLLSTMQEREMLPDFVLCVGDDRSDEDMFEVIISSMAGPSIAPRAEVFACTVGRKPSKAKYYLD 809 (831)
Q Consensus 730 ~vEV~p~gvnKG~al~~Ll~~l~~~g~~~d~vla~GD~~NDe~Mf~~a~~~~~~~~~~~~~~~~~v~vG~~~s~A~y~l~ 809 (831)
++||+|+++|||.|++++++++ |+..+++++|||+.||++||+++... ..++|+||++.+.|+|+|+
T Consensus 165 ~lEi~p~g~~Kg~al~~ll~~~---~~~~~~v~~~GD~~nD~~mf~~~~~~----------~g~~vavg~a~~~A~~~l~ 231 (266)
T PRK10187 165 VVEIKPRGTNKGEAIAAFMQEA---PFAGRTPVFVGDDLTDEAGFAVVNRL----------GGISVKVGTGATQASWRLA 231 (266)
T ss_pred EEEeeCCCCCHHHHHHHHHHhc---CCCCCeEEEEcCCccHHHHHHHHHhc----------CCeEEEECCCCCcCeEeCC
Confidence 9999999999999999999998 88899999999999999999999532 1279999999999999999
Q ss_pred ChhHHHHHHHHHHhhhc
Q 044635 810 DTVEIVRLMQGLACVAD 826 (831)
Q Consensus 810 d~~eV~~~L~~L~~~~~ 826 (831)
++++|..+|+.|+....
T Consensus 232 ~~~~v~~~L~~l~~~~~ 248 (266)
T PRK10187 232 GVPDVWSWLEMITTAQQ 248 (266)
T ss_pred CHHHHHHHHHHHHHhhh
Confidence 99999999999997554
No 19
>PLN02580 trehalose-phosphatase
Probab=100.00 E-value=4.7e-33 Score=304.41 Aligned_cols=241 Identities=23% Similarity=0.343 Sum_probs=190.7
Q ss_pred HHHHhcCceeEEecCCCccCCCCC--CCCCCCHHHHHHHHHHhhcCCCeEEEECCCCHhhHHHHhCCCCCceEEecCCEE
Q 044635 566 SAYKRTTTRAILLDYDGTLMPQAS--IDKSPNSKTIDILNSLCRDKNNMVFLVSAKSRKTLAEWFSPCENLGIAAEHGYF 643 (831)
Q Consensus 566 ~~y~~s~~rli~~D~DGTLl~~~~--~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~~~~~~liaenGa~ 643 (831)
.+|.+++++++|+||||||.+... ....++++++++|++|+++ ..|+|+|||++..+.++++. +.++++++||++
T Consensus 112 ~~~~~~k~~~LfLDyDGTLaPIv~~Pd~A~~s~~~~~aL~~La~~--~~VAIVSGR~~~~L~~~l~~-~~l~laGsHG~e 188 (384)
T PLN02580 112 ANFAKGKKIALFLDYDGTLSPIVDDPDRALMSDAMRSAVKNVAKY--FPTAIISGRSRDKVYELVGL-TELYYAGSHGMD 188 (384)
T ss_pred HHHhhcCCeEEEEecCCccCCCCCCcccccCCHHHHHHHHHHhhC--CCEEEEeCCCHHHHHHHhCC-CCccEEEeCCce
Confidence 478999999999999999998553 3456799999999999885 47999999999999999974 579999999999
Q ss_pred EEeCCC----ceEEEcC------------CcCCccHHHHHHHHHHH---HhccCCCeeEeeccceEEEeeccCCCccchH
Q 044635 644 FRLRRD----EEWETCI------------PVADCGWKQIAEPVMKL---YTETTDGSTIEDKETALVWSYEDADPDFGSC 704 (831)
Q Consensus 644 i~~~~~----~~w~~~~------------~~~~~~w~~~v~~il~~---~~e~~~gs~ie~k~~~l~~~~~~~d~~~~~~ 704 (831)
++.+.+ ..|..++ ......|...+.++++. ++++++|+++|.|.++++||||+++++++..
T Consensus 189 ~~~p~~~~~~~~~~~~~~~~~~~g~~~~~~~~a~~~~~~i~~v~~~l~e~~~~~pGs~VE~K~~svavHYR~a~~~~~~~ 268 (384)
T PLN02580 189 IMGPVRESVSNDHPNCIKSTDQQGKEVNLFQPASEFLPMIDEVFRSLVESTKDIKGAKVENHKFCVSVHYRNVDEKNWPL 268 (384)
T ss_pred eecCCCCcccccccccccccccccccccccccchhhhhhHHHHHHHHHHHhccCCCCEEEecCcEEEEEeCCCCchHHHH
Confidence 986522 1222110 11135677666666665 5567899999999999999999998876555
Q ss_pred HHHHHHHHHHhHhcCCC-eEEEEcCeEEEEEe-CCCCHHHHHHHHHHHhhhcCCCcc-c--EEEEcCCchhHHHHHHcch
Q 044635 705 QAKELLDHLESVLANEP-VTVKSGQNLVEVKP-QGVNKGLVAKRLLSTMQEREMLPD-F--VLCVGDDRSDEDMFEVIIS 779 (831)
Q Consensus 705 ~a~el~~~L~~~l~~~~-v~v~~g~~~vEV~p-~gvnKG~al~~Ll~~l~~~g~~~d-~--vla~GD~~NDe~Mf~~a~~ 779 (831)
+++++...+ .+.+ +.+..|+.++||+| .++|||.|+++|++.+ |+..+ + ++|||||.|||+||+++..
T Consensus 269 ~~~~l~~~l----~~~~~l~v~~Gk~vlEVrP~~g~~KG~Av~~Ll~~~---g~~~~d~~~pi~iGDD~TDedmF~~L~~ 341 (384)
T PLN02580 269 VAQCVHDVL----KKYPRLRLTHGRKVLEVRPVIDWNKGKAVEFLLESL---GLSNCDDVLPIYIGDDRTDEDAFKVLRE 341 (384)
T ss_pred HHHHHHHHH----HhCCceEEEeCCeEEEEecCCCCCHHHHHHHHHHhc---CCCcccceeEEEECCCchHHHHHHhhhc
Confidence 454444443 3443 78889999999999 5999999999999988 66543 3 5999999999999999864
Q ss_pred hcCCCCCCCCCceEEEEeCC--CCcccceEeCChhHHHHHHHHHHhhh
Q 044635 780 SMAGPSIAPRAEVFACTVGR--KPSKAKYYLDDTVEIVRLMQGLACVA 825 (831)
Q Consensus 780 ~~~~~~~~~~~~~~~v~vG~--~~s~A~y~l~d~~eV~~~L~~L~~~~ 825 (831)
.. ..++|.||+ +.+.|+|+|+|+++|..+|+.|+.-.
T Consensus 342 ~~---------~G~~I~Vgn~~~~t~A~y~L~dp~eV~~~L~~L~~~~ 380 (384)
T PLN02580 342 GN---------RGYGILVSSVPKESNAFYSLRDPSEVMEFLKSLVTWK 380 (384)
T ss_pred cC---------CceEEEEecCCCCccceEEcCCHHHHHHHHHHHHHhh
Confidence 21 126777775 68999999999999999999998753
No 20
>COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only]
Probab=99.95 E-value=3.2e-26 Score=244.90 Aligned_cols=225 Identities=20% Similarity=0.284 Sum_probs=160.7
Q ss_pred CceeEEecCCCccCCCCCCCCCCCHHHHHHHHHHhhcCCCeEEEECCCCHhhHHHHhCCCC-CceEEecCCEEEEeCCCc
Q 044635 572 TTRAILLDYDGTLMPQASIDKSPNSKTIDILNSLCRDKNNMVFLVSAKSRKTLAEWFSPCE-NLGIAAEHGYFFRLRRDE 650 (831)
Q Consensus 572 ~~rli~~D~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~~~-~~~liaenGa~i~~~~~~ 650 (831)
.+|+|++|+||||++ .++.++++++++|+++.+ +|..|+|+|||+...+.+.+..+. ..++|++||++|++.+..
T Consensus 2 ~~kli~~DlDGTLl~---~~~~i~~~~~~al~~~~~-~g~~v~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~i~~~~~~ 77 (264)
T COG0561 2 MIKLLAFDLDGTLLD---SNKTISPETKEALARLRE-KGVKVVLATGRPLPDVLSILEELGLDGPLITFNGALIYNGGEL 77 (264)
T ss_pred CeeEEEEcCCCCccC---CCCccCHHHHHHHHHHHH-CCCEEEEECCCChHHHHHHHHHcCCCccEEEeCCeEEecCCcE
Confidence 579999999999999 677799999999999976 699999999999999999998874 337999999999998433
Q ss_pred eEEEcCCcCCccHHHHHHHHHHHHhcc--CCCeeEeeccceEE------------E-----eeccC---CC------ccc
Q 044635 651 EWETCIPVADCGWKQIAEPVMKLYTET--TDGSTIEDKETALV------------W-----SYEDA---DP------DFG 702 (831)
Q Consensus 651 ~w~~~~~~~~~~w~~~v~~il~~~~e~--~~gs~ie~k~~~l~------------~-----~~~~~---d~------~~~ 702 (831)
.....+ + ++.+..+++...+. ....+......... . ..... +. ...
T Consensus 78 i~~~~l---~---~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (264)
T COG0561 78 LFQKPL---S---REDVEELLELLEDFQGIALVLYTDDGIYLTKKRGTFAEARIGFANLSPVGREAAELEDNKIIALDKD 151 (264)
T ss_pred EeeecC---C---HHHHHHHHHHHHhccCceEEEEeccceeeccCCCcccccccccccccccccchhhcCcceEEEEecC
Confidence 333332 1 34556666554322 11111111100000 0 00000 00 001
Q ss_pred hHHHHHHHHHHHhHhcCCCeEEEEcCeE-EEEEeCCCCHHHHHHHHHHHhhhcCCCcccEEEEcCCchhHHHHHHcchhc
Q 044635 703 SCQAKELLDHLESVLANEPVTVKSGQNL-VEVKPQGVNKGLVAKRLLSTMQEREMLPDFVLCVGDDRSDEDMFEVIISSM 781 (831)
Q Consensus 703 ~~~a~el~~~L~~~l~~~~v~v~~g~~~-vEV~p~gvnKG~al~~Ll~~l~~~g~~~d~vla~GD~~NDe~Mf~~a~~~~ 781 (831)
.....++...+.+.+......+.++..+ +||+|+|+|||.|+++|++++ |+++++|+||||+.||++||+.++
T Consensus 152 ~~~~~~~~~~l~~~~~~~~~~~~~s~~~~lei~~~g~~K~~al~~l~~~l---gi~~~~v~afGD~~ND~~Ml~~ag--- 225 (264)
T COG0561 152 HEILEELVEALRKRFPDLGLTVSSSGPISLDITPKGVSKGYALQRLAKLL---GIKLEEVIAFGDSTNDIEMLEVAG--- 225 (264)
T ss_pred hHhHHHHHHHHhhhccccceEEEEcCCceEEEecCCCchHHHHHHHHHHh---CCCHHHeEEeCCccccHHHHHhcC---
Confidence 1233445555555555455566666554 999999999999999999998 999999999999999999999998
Q ss_pred CCCCCCCCCceEEEEeCCC----CcccceEe--CChhHHHHHHHHHHh
Q 044635 782 AGPSIAPRAEVFACTVGRK----PSKAKYYL--DDTVEIVRLMQGLAC 823 (831)
Q Consensus 782 ~~~~~~~~~~~~~v~vG~~----~s~A~y~l--~d~~eV~~~L~~L~~ 823 (831)
++|+|||+ +..|++++ ++.++|.+.|+++..
T Consensus 226 -----------~gvam~Na~~~~k~~A~~vt~~n~~~Gv~~~l~~~~~ 262 (264)
T COG0561 226 -----------LGVAMGNADEELKELADYVTTSNDEDGVAEALEKLLL 262 (264)
T ss_pred -----------eeeeccCCCHHHHhhCCcccCCccchHHHHHHHHHhc
Confidence 47888886 46788664 578999999998753
No 21
>PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional
Probab=99.94 E-value=4.9e-26 Score=244.59 Aligned_cols=224 Identities=17% Similarity=0.187 Sum_probs=155.6
Q ss_pred ceeEEecCCCccCCCCCCCCCCCHHHHHHHHHHhhcCCCeEEEECCCCHhhHHHHhCCCC-CceEEecCCEEEEeCCCc-
Q 044635 573 TRAILLDYDGTLMPQASIDKSPNSKTIDILNSLCRDKNNMVFLVSAKSRKTLAEWFSPCE-NLGIAAEHGYFFRLRRDE- 650 (831)
Q Consensus 573 ~rli~~D~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~~~-~~~liaenGa~i~~~~~~- 650 (831)
+|+|++|+||||++ .++.++++++++|++|.+ +|+.|+++|||+...+.+++..+. ..++|+.||+.|++..+.
T Consensus 2 ~kli~~DlDGTLl~---~~~~i~~~~~~ai~~l~~-~G~~~~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~I~~~~~~~ 77 (272)
T PRK15126 2 ARLAAFDMDGTLLM---PDHHLGEKTLSTLARLRE-RDITLTFATGRHVLEMQHILGALSLDAYLITGNGTRVHSLEGEL 77 (272)
T ss_pred ccEEEEeCCCcCcC---CCCcCCHHHHHHHHHHHH-CCCEEEEECCCCHHHHHHHHHHcCCCCcEEecCCcEEEcCCCCE
Confidence 68999999999998 677899999999999977 699999999999999999987763 457899999999964443
Q ss_pred eEEEcCCcCCccHHHHHHHHHHHHhcc--------CCCeeEeeccc---------eEEEeec---cCC-Ccc-------c
Q 044635 651 EWETCIPVADCGWKQIAEPVMKLYTET--------TDGSTIEDKET---------ALVWSYE---DAD-PDF-------G 702 (831)
Q Consensus 651 ~w~~~~~~~~~~w~~~v~~il~~~~e~--------~~gs~ie~k~~---------~l~~~~~---~~d-~~~-------~ 702 (831)
.+...++ .+.+.++++...+. ..+.+...... ...+... ... ... .
T Consensus 78 l~~~~i~------~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~~~~~ 151 (272)
T PRK15126 78 LHRQDLP------ADVAELVLHQQWDTRASMHVFNDDGWFTGKEIPALLQAHVYSGFRYQLIDLKRLPAHGVTKICFCGD 151 (272)
T ss_pred EEeecCC------HHHHHHHHHHhhhcCcEEEEEcCCeEEecCCcHHHHHHHHhcCCceEEecHHHccccCceEEEEECC
Confidence 3333322 23455555433221 11111110000 0000000 000 000 1
Q ss_pred hHHHHHHHHHHHhHhcCCCeEEEEcCeEEEEEeCCCCHHHHHHHHHHHhhhcCCCcccEEEEcCCchhHHHHHHcchhcC
Q 044635 703 SCQAKELLDHLESVLANEPVTVKSGQNLVEVKPQGVNKGLVAKRLLSTMQEREMLPDFVLCVGDDRSDEDMFEVIISSMA 782 (831)
Q Consensus 703 ~~~a~el~~~L~~~l~~~~v~v~~g~~~vEV~p~gvnKG~al~~Ll~~l~~~g~~~d~vla~GD~~NDe~Mf~~a~~~~~ 782 (831)
.....++...+.+.+......+.++..++||+|+++|||+|+++|++++ |+++++++||||+.||++||+.++.
T Consensus 152 ~~~~~~~~~~l~~~~~~~~~~~~s~~~~~eI~~~g~sKg~al~~l~~~~---gi~~~~v~afGD~~NDi~Ml~~ag~--- 225 (272)
T PRK15126 152 HDDLTRLQIQLNEALGERAHLCFSATDCLEVLPVGCNKGAALAVLSQHL---GLSLADCMAFGDAMNDREMLGSVGR--- 225 (272)
T ss_pred HHHHHHHHHHHHHHhcCCEEEEEcCCcEEEeecCCCChHHHHHHHHHHh---CCCHHHeEEecCCHHHHHHHHHcCC---
Confidence 1223444555555443322234456789999999999999999999999 9999999999999999999999984
Q ss_pred CCCCCCCCceEEEEeCCC----Ccccce--Ee--CChhHHHHHHHHHHh
Q 044635 783 GPSIAPRAEVFACTVGRK----PSKAKY--YL--DDTVEIVRLMQGLAC 823 (831)
Q Consensus 783 ~~~~~~~~~~~~v~vG~~----~s~A~y--~l--~d~~eV~~~L~~L~~ 823 (831)
+++|||+ +..|+| ++ ++.++|.++|+++..
T Consensus 226 -----------~vAm~Na~~~vK~~A~~~~v~~~n~edGva~~l~~~~~ 263 (272)
T PRK15126 226 -----------GFIMGNAMPQLRAELPHLPVIGHCRNQAVSHYLTHWLD 263 (272)
T ss_pred -----------ceeccCChHHHHHhCCCCeecCCCcchHHHHHHHHHhc
Confidence 6778876 466776 44 478999999999874
No 22
>PRK10976 putative hydrolase; Provisional
Probab=99.94 E-value=7.6e-26 Score=242.29 Aligned_cols=223 Identities=13% Similarity=0.169 Sum_probs=153.1
Q ss_pred ceeEEecCCCccCCCCCCCCCCCHHHHHHHHHHhhcCCCeEEEECCCCHhhHHHHhCCCC-CceEEecCCEEEEeCCCce
Q 044635 573 TRAILLDYDGTLMPQASIDKSPNSKTIDILNSLCRDKNNMVFLVSAKSRKTLAEWFSPCE-NLGIAAEHGYFFRLRRDEE 651 (831)
Q Consensus 573 ~rli~~D~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~~~-~~~liaenGa~i~~~~~~~ 651 (831)
+|+|++|+||||++ .++.++++++++|++|.+ +|+.|+|||||+...+.+.+..+. ..++|+.||+.|++.++..
T Consensus 2 ikli~~DlDGTLl~---~~~~is~~~~~ai~~l~~-~G~~~~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~i~~~~~~~ 77 (266)
T PRK10976 2 YQVVASDLDGTLLS---PDHTLSPYAKETLKLLTA-RGIHFVFATGRHHVDVGQIRDNLEIKSYMITSNGARVHDTDGNL 77 (266)
T ss_pred ceEEEEeCCCCCcC---CCCcCCHHHHHHHHHHHH-CCCEEEEEcCCChHHHHHHHHhcCCCCeEEEcCCcEEECCCCCE
Confidence 58999999999998 677899999999999977 699999999999999999887773 4578999999998753332
Q ss_pred -EEEcCCcCCccHHHHHHHHHHHHhcc---------CCCeeEeeccc-----------eEEEe-eccCCC-cc-------
Q 044635 652 -WETCIPVADCGWKQIAEPVMKLYTET---------TDGSTIEDKET-----------ALVWS-YEDADP-DF------- 701 (831)
Q Consensus 652 -w~~~~~~~~~~w~~~v~~il~~~~e~---------~~gs~ie~k~~-----------~l~~~-~~~~d~-~~------- 701 (831)
+...+ + .+.+.++++...+. ..+.++..... ..... ...... ..
T Consensus 78 i~~~~l---~---~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ki~~~~ 151 (266)
T PRK10976 78 IFSHNL---D---RDIASDLFGVVHDNPDIITNVYRDDEWFMNRHRPEEMRFFKEAVFKYQLYEPGLLEPDGVSKVFFTC 151 (266)
T ss_pred ehhhcC---C---HHHHHHHHHhhcccCCEEEEEEcCCeEEEcCCChHHHHHHHhcCCcceeechhhcccCCceEEEEEc
Confidence 22222 1 24455555543221 11111111000 00000 000000 00
Q ss_pred -chHHHHHHHHHHHhHhcCCCeEEEEcCeEEEEEeCCCCHHHHHHHHHHHhhhcCCCcccEEEEcCCchhHHHHHHcchh
Q 044635 702 -GSCQAKELLDHLESVLANEPVTVKSGQNLVEVKPQGVNKGLVAKRLLSTMQEREMLPDFVLCVGDDRSDEDMFEVIISS 780 (831)
Q Consensus 702 -~~~~a~el~~~L~~~l~~~~v~v~~g~~~vEV~p~gvnKG~al~~Ll~~l~~~g~~~d~vla~GD~~NDe~Mf~~a~~~ 780 (831)
......++.+.+.+.+......+.++..++||+|+++|||.|+++|++++ |+++++|+||||+.||++||+.++.
T Consensus 152 ~~~~~~~~~~~~l~~~~~~~~~~~~s~~~~~eI~~~gvsKg~al~~l~~~l---gi~~~~viafGD~~NDi~Ml~~ag~- 227 (266)
T PRK10976 152 DSHEKLLPLEQAINARWGDRVNVSFSTLTCLEVMAGGVSKGHALEAVAKKL---GYSLKDCIAFGDGMNDAEMLSMAGK- 227 (266)
T ss_pred CCHHHHHHHHHHHHHHhCCcEEEEEeCCceEEEEcCCCChHHHHHHHHHHc---CCCHHHeEEEcCCcccHHHHHHcCC-
Confidence 01122334444444443222234567789999999999999999999999 9999999999999999999999985
Q ss_pred cCCCCCCCCCceEEEEeCCC----Ccccc--eEe--CChhHHHHHHHHHH
Q 044635 781 MAGPSIAPRAEVFACTVGRK----PSKAK--YYL--DDTVEIVRLMQGLA 822 (831)
Q Consensus 781 ~~~~~~~~~~~~~~v~vG~~----~s~A~--y~l--~d~~eV~~~L~~L~ 822 (831)
+|+|||+ +..|+ +++ ++.++|.++|+++.
T Consensus 228 -------------~vAm~NA~~~vK~~A~~~~v~~~n~edGVa~~l~~~~ 264 (266)
T PRK10976 228 -------------GCIMGNAHQRLKDLLPELEVIGSNADDAVPHYLRKLY 264 (266)
T ss_pred -------------CeeecCCcHHHHHhCCCCeecccCchHHHHHHHHHHh
Confidence 5778876 45665 555 57899999999875
No 23
>PRK10513 sugar phosphate phosphatase; Provisional
Probab=99.94 E-value=1.8e-25 Score=239.97 Aligned_cols=224 Identities=17% Similarity=0.230 Sum_probs=154.3
Q ss_pred CceeEEecCCCccCCCCCCCCCCCHHHHHHHHHHhhcCCCeEEEECCCCHhhHHHHhCCCC----CceEEecCCEEEEeC
Q 044635 572 TTRAILLDYDGTLMPQASIDKSPNSKTIDILNSLCRDKNNMVFLVSAKSRKTLAEWFSPCE----NLGIAAEHGYFFRLR 647 (831)
Q Consensus 572 ~~rli~~D~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~~~----~~~liaenGa~i~~~ 647 (831)
++|+|++|+||||++ .++.++++++++|++|.+ .|+.|+|||||+...+...+..+. ..++|+.||+.|+..
T Consensus 2 ~~kli~~DlDGTLl~---~~~~i~~~~~~ai~~l~~-~G~~~~iaTGR~~~~~~~~~~~l~~~~~~~~~I~~NGa~i~~~ 77 (270)
T PRK10513 2 AIKLIAIDMDGTLLL---PDHTISPAVKQAIAAARA-KGVNVVLTTGRPYAGVHRYLKELHMEQPGDYCITNNGALVQKA 77 (270)
T ss_pred ceEEEEEecCCcCcC---CCCccCHHHHHHHHHHHH-CCCEEEEecCCChHHHHHHHHHhCCCCCCCeEEEcCCeEEEEC
Confidence 478999999999998 677899999999999977 699999999999999998887763 246899999999874
Q ss_pred C-Cc-eEEEcCCcCCccHHHHHHHHHHHHhcc--------CCCeeEeeccce-----------EEEeecc---CCCc--c
Q 044635 648 R-DE-EWETCIPVADCGWKQIAEPVMKLYTET--------TDGSTIEDKETA-----------LVWSYED---ADPD--F 701 (831)
Q Consensus 648 ~-~~-~w~~~~~~~~~~w~~~v~~il~~~~e~--------~~gs~ie~k~~~-----------l~~~~~~---~d~~--~ 701 (831)
. +. .+...++ .+.+..+++...+. ..+.|...+... ....+.. .++. +
T Consensus 78 ~~~~~i~~~~l~------~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (270)
T PRK10513 78 ADGETVAQTALS------YDDYLYLEKLSREVGVHFHALDRNTLYTANRDISYYTVHESFLTGIPLVFREVEKMDPNLQF 151 (270)
T ss_pred CCCCEEEecCCC------HHHHHHHHHHHHHcCCcEEEEECCEEEEecCCcchhHHHhhhhccCCccccchhhccccCCc
Confidence 3 33 3333332 12334444332211 112222111100 0000000 0000 0
Q ss_pred ------c-hHHHHHHHHHHHhHhcCCCeEEEEcCeEEEEEeCCCCHHHHHHHHHHHhhhcCCCcccEEEEcCCchhHHHH
Q 044635 702 ------G-SCQAKELLDHLESVLANEPVTVKSGQNLVEVKPQGVNKGLVAKRLLSTMQEREMLPDFVLCVGDDRSDEDMF 774 (831)
Q Consensus 702 ------~-~~~a~el~~~L~~~l~~~~v~v~~g~~~vEV~p~gvnKG~al~~Ll~~l~~~g~~~d~vla~GD~~NDe~Mf 774 (831)
. .....++...+.+.+......+.++..++||+|+|+|||.|+++|++++ |+++++++||||+.||++||
T Consensus 152 ~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~eI~~~gvsKg~al~~l~~~~---gi~~~~v~afGD~~NDi~Ml 228 (270)
T PRK10513 152 PKVMMIDEPEILDAAIARIPAEVKERYTVLKSAPYFLEILDKRVNKGTGVKSLAEHL---GIKPEEVMAIGDQENDIAMI 228 (270)
T ss_pred eEEEEeCCHHHHHHHHHHhHHHhcCcEEEEEecCeeEEEeCCCCChHHHHHHHHHHh---CCCHHHEEEECCchhhHHHH
Confidence 0 1122333344443332222234567789999999999999999999999 99999999999999999999
Q ss_pred HHcchhcCCCCCCCCCceEEEEeCCC----CcccceEe--CChhHHHHHHHHHH
Q 044635 775 EVIISSMAGPSIAPRAEVFACTVGRK----PSKAKYYL--DDTVEIVRLMQGLA 822 (831)
Q Consensus 775 ~~a~~~~~~~~~~~~~~~~~v~vG~~----~s~A~y~l--~d~~eV~~~L~~L~ 822 (831)
+.++ ++|+|||+ +..|+|++ ++.++|.++|+++.
T Consensus 229 ~~ag--------------~~vAm~NA~~~vK~~A~~vt~~n~~dGva~~i~~~~ 268 (270)
T PRK10513 229 EYAG--------------VGVAMGNAIPSVKEVAQFVTKSNLEDGVAFAIEKYV 268 (270)
T ss_pred HhCC--------------ceEEecCccHHHHHhcCeeccCCCcchHHHHHHHHh
Confidence 9998 46888886 57899987 46899999999874
No 24
>PLN02887 hydrolase family protein
Probab=99.93 E-value=2.3e-24 Score=249.61 Aligned_cols=230 Identities=16% Similarity=0.232 Sum_probs=157.4
Q ss_pred HHHHHhcCceeEEecCCCccCCCCCCCCCCCHHHHHHHHHHhhcCCCeEEEECCCCHhhHHHHhCCCC---C-------c
Q 044635 565 VSAYKRTTTRAILLDYDGTLMPQASIDKSPNSKTIDILNSLCRDKNNMVFLVSAKSRKTLAEWFSPCE---N-------L 634 (831)
Q Consensus 565 ~~~y~~s~~rli~~D~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~~~---~-------~ 634 (831)
.+.| +.++|+|++|+||||++ .++.++++++++|++|.+ .|+.|+|||||+...+..++..+. . .
T Consensus 301 ~~~~-~~~iKLIa~DLDGTLLn---~d~~Is~~t~eAI~kl~e-kGi~~vIATGR~~~~i~~~l~~L~l~~~~~~I~~~~ 375 (580)
T PLN02887 301 LRFY-KPKFSYIFCDMDGTLLN---SKSQISETNAKALKEALS-RGVKVVIATGKARPAVIDILKMVDLAGKDGIISESS 375 (580)
T ss_pred hhhh-ccCccEEEEeCCCCCCC---CCCccCHHHHHHHHHHHH-CCCeEEEEcCCCHHHHHHHHHHhCcccccceEeecc
Confidence 3344 45789999999999999 678899999999999987 699999999999999988887652 1 2
Q ss_pred eEEecCCEEEEeCCCc-eEEEcCCcCCccHHHHHHHHHHHHhcc--------CCCeeEeeccceEE-Ee--ec--c---C
Q 044635 635 GIAAEHGYFFRLRRDE-EWETCIPVADCGWKQIAEPVMKLYTET--------TDGSTIEDKETALV-WS--YE--D---A 697 (831)
Q Consensus 635 ~liaenGa~i~~~~~~-~w~~~~~~~~~~w~~~v~~il~~~~e~--------~~gs~ie~k~~~l~-~~--~~--~---~ 697 (831)
+.|+.||+.|++..+. .+...++ .+.+.++++...+. .++.|......... ++ +. . .
T Consensus 376 p~I~~NGA~I~d~~g~~I~~~~L~------~e~v~eIi~~~~~~~i~~~~~~~d~~y~~~~~~~~~~~~~~~~~~~~~~i 449 (580)
T PLN02887 376 PGVFLQGLLVYGRQGREIYRSNLD------QEVCREACLYSLEHKIPLIAFSQDRCLTLFDHPLVDSLHTIYHEPKAEIM 449 (580)
T ss_pred cEEeecCeEEEECCCcEEEEEeCC------HHHHHHHHHHHHHcCCeEEEEECCeEEEecCchHHHHHHHhhcccccccc
Confidence 4567799999864443 3443332 24455555543321 11111110000000 00 00 0 0
Q ss_pred -C-------Ccc------ch--HHHHHHHHHHHhHhcCCCeEEEEcCeEEEEEeCCCCHHHHHHHHHHHhhhcCCCcccE
Q 044635 698 -D-------PDF------GS--CQAKELLDHLESVLANEPVTVKSGQNLVEVKPQGVNKGLVAKRLLSTMQEREMLPDFV 761 (831)
Q Consensus 698 -d-------~~~------~~--~~a~el~~~L~~~l~~~~v~v~~g~~~vEV~p~gvnKG~al~~Ll~~l~~~g~~~d~v 761 (831)
+ ... .. ....++...+.+.+......+.++..++||+|+|+|||.|+++|++++ |+++++|
T Consensus 450 ~~l~~~~~~~~i~Ki~~~~~~e~~~~~l~~~l~~~~~~~~~v~~S~~~~lEI~p~gvSKG~ALk~L~e~l---GI~~eev 526 (580)
T PLN02887 450 SSVDQLLAAADIQKVIFLDTAEGVSSVLRPYWSEATGDRANVVQAQPDMLEIVPPGTSKGNGVKMLLNHL---GVSPDEI 526 (580)
T ss_pred CCHHHhhcccCeeEEEEEcChHHHHHHHHHHHHHHhcCcEEEEEecCcEEEEecCCCCHHHHHHHHHHHc---CCCHHHE
Confidence 0 000 00 011223334444443322335567789999999999999999999999 9999999
Q ss_pred EEEcCCchhHHHHHHcchhcCCCCCCCCCceEEEEeCCC----CcccceEe--CChhHHHHHHHHHH
Q 044635 762 LCVGDDRSDEDMFEVIISSMAGPSIAPRAEVFACTVGRK----PSKAKYYL--DDTVEIVRLMQGLA 822 (831)
Q Consensus 762 la~GD~~NDe~Mf~~a~~~~~~~~~~~~~~~~~v~vG~~----~s~A~y~l--~d~~eV~~~L~~L~ 822 (831)
+||||+.||++||+.++ ++|+|||+ +..|+|++ ++.++|.++|++++
T Consensus 527 iAFGDs~NDIeMLe~AG--------------~gVAMgNA~eeVK~~Ad~VT~sNdEDGVA~aLek~~ 579 (580)
T PLN02887 527 MAIGDGENDIEMLQLAS--------------LGVALSNGAEKTKAVADVIGVSNDEDGVADAIYRYA 579 (580)
T ss_pred EEEecchhhHHHHHHCC--------------CEEEeCCCCHHHHHhCCEEeCCCCcCHHHHHHHHhh
Confidence 99999999999999998 47888886 57899987 47899999999864
No 25
>PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=99.93 E-value=1.4e-24 Score=232.99 Aligned_cols=222 Identities=17% Similarity=0.134 Sum_probs=150.6
Q ss_pred CceeEEecCCCccCCCCCCCCCCCHHHHHHHHHHhhcCCCeEEEECCCCHhhHHHHhCCCC--CceEEecCCEEEEeCCC
Q 044635 572 TTRAILLDYDGTLMPQASIDKSPNSKTIDILNSLCRDKNNMVFLVSAKSRKTLAEWFSPCE--NLGIAAEHGYFFRLRRD 649 (831)
Q Consensus 572 ~~rli~~D~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~~~--~~~liaenGa~i~~~~~ 649 (831)
.+++|++|+||||++ .++.++++++++|++|.+ +|+.|+++|||+...+..++..+. ..++|++||+.|+.+.+
T Consensus 6 ~~~lI~~DlDGTLL~---~~~~i~~~~~~ai~~l~~-~Gi~~viaTGR~~~~i~~~~~~l~~~~~~~I~~NGa~I~~~~~ 81 (271)
T PRK03669 6 DPLLIFTDLDGTLLD---SHTYDWQPAAPWLTRLRE-AQVPVILCSSKTAAEMLPLQQTLGLQGLPLIAENGAVIQLDEQ 81 (271)
T ss_pred CCeEEEEeCccCCcC---CCCcCcHHHHHHHHHHHH-cCCeEEEEcCCCHHHHHHHHHHhCCCCCcEEEeCCCEEEecCc
Confidence 579999999999998 567788999999999976 699999999999999999988763 24799999999987643
Q ss_pred c-------eEEEcCCcCCccHHHHHHHHHHHHhccCCCee-Eeeccc-----eEEE---------eeccCCCcc----ch
Q 044635 650 E-------EWETCIPVADCGWKQIAEPVMKLYTETTDGST-IEDKET-----ALVW---------SYEDADPDF----GS 703 (831)
Q Consensus 650 ~-------~w~~~~~~~~~~w~~~v~~il~~~~e~~~gs~-ie~k~~-----~l~~---------~~~~~d~~~----~~ 703 (831)
. .+...+ + .+.+..+++...+...-.+ ...... .... ........+ ..
T Consensus 82 ~~~~~~~~~~~~~l---~---~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (271)
T PRK03669 82 WQDHPDFPRIISGI---S---HGEIRQVLNTLREKEGFKFTTFDDVDDATIAEWTGLSRSQAALARLHEASVTLIWRDSD 155 (271)
T ss_pred ccCCCCceEeecCC---C---HHHHHHHHHHHHHhcCCceeecccCCHHHHHHHhCCCHHHHHHHhccccCceeEecCCH
Confidence 1 111111 1 2345555554332101000 000000 0000 000000000 01
Q ss_pred HHHHHHHHHHHhHhcCCCeEEEEcCeEEEEEeCCCCHHHHHHHHHHHhhhcCC---CcccEEEEcCCchhHHHHHHcchh
Q 044635 704 CQAKELLDHLESVLANEPVTVKSGQNLVEVKPQGVNKGLVAKRLLSTMQEREM---LPDFVLCVGDDRSDEDMFEVIISS 780 (831)
Q Consensus 704 ~~a~el~~~L~~~l~~~~v~v~~g~~~vEV~p~gvnKG~al~~Ll~~l~~~g~---~~d~vla~GD~~NDe~Mf~~a~~~ 780 (831)
....++.+.+.. ..+.+.++..++||+|+++|||.|+++|++++ |+ ++++|+||||+.||++||+.++.
T Consensus 156 ~~~~~~~~~l~~----~~~~~~~~~~~iEi~~~g~sKg~al~~l~~~l---gi~~~~~~~viafGDs~NDi~Ml~~ag~- 227 (271)
T PRK03669 156 ERMAQFTARLAE----LGLQFVQGARFWHVLDASAGKDQAANWLIATY---QQLSGTRPTTLGLGDGPNDAPLLDVMDY- 227 (271)
T ss_pred HHHHHHHHHHHH----CCCEEEecCeeEEEecCCCCHHHHHHHHHHHH---HhhcCCCceEEEEcCCHHHHHHHHhCCE-
Confidence 122333444432 23455556679999999999999999999999 99 99999999999999999999984
Q ss_pred cCCCCCCCCCceEEEEeCCC----------CcccceEeC--ChhHHHHHHHHHHhh
Q 044635 781 MAGPSIAPRAEVFACTVGRK----------PSKAKYYLD--DTVEIVRLMQGLACV 824 (831)
Q Consensus 781 ~~~~~~~~~~~~~~v~vG~~----------~s~A~y~l~--d~~eV~~~L~~L~~~ 824 (831)
+|+||+. +..|.|+++ +.+++.+.|+.+...
T Consensus 228 -------------gvAM~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~l~~~~~~ 270 (271)
T PRK03669 228 -------------AVVVKGLNREGVHLQDDDPARVYRTQREGPEGWREGLDHFFSA 270 (271)
T ss_pred -------------EEEecCCCCCCcccccccCCceEeccCCCcHHHHHHHHHHHhc
Confidence 6666632 236778885 577999999988653
No 26
>PRK01158 phosphoglycolate phosphatase; Provisional
Probab=99.93 E-value=2.1e-24 Score=225.86 Aligned_cols=213 Identities=20% Similarity=0.218 Sum_probs=148.3
Q ss_pred CceeEEecCCCccCCCCCCCCCCCHHHHHHHHHHhhcCCCeEEEECCCCHhhHHHHhCCCC-CceEEecCCEEEEeCC-C
Q 044635 572 TTRAILLDYDGTLMPQASIDKSPNSKTIDILNSLCRDKNNMVFLVSAKSRKTLAEWFSPCE-NLGIAAEHGYFFRLRR-D 649 (831)
Q Consensus 572 ~~rli~~D~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~~~-~~~liaenGa~i~~~~-~ 649 (831)
.+|+|++|+||||++ .++.+++++.++|++|.+ .|+.|+|+|||+...+.+++..+. +.++|++||+.++... +
T Consensus 2 ~~kli~~DlDGTLl~---~~~~i~~~~~~al~~l~~-~G~~~~iaTGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~ 77 (230)
T PRK01158 2 KIKAIAIDIDGTITD---KDRRLSLKAVEAIRKAEK-LGIPVILATGNVLCFARAAAKLIGTSGPVIAENGGVISVGFDG 77 (230)
T ss_pred ceeEEEEecCCCcCC---CCCccCHHHHHHHHHHHH-CCCEEEEEcCCchHHHHHHHHHhCCCCcEEEecCeEEEEcCCC
Confidence 368999999999998 677899999999999986 699999999999999988876663 4579999999998763 2
Q ss_pred c-eEEEcCCcCCccHHHHHHHHHHHHhccCCCe--eEeec--cce--EEEeeccCCCccchHHHHHHHHHHHhHhcCCCe
Q 044635 650 E-EWETCIPVADCGWKQIAEPVMKLYTETTDGS--TIEDK--ETA--LVWSYEDADPDFGSCQAKELLDHLESVLANEPV 722 (831)
Q Consensus 650 ~-~w~~~~~~~~~~w~~~v~~il~~~~e~~~gs--~ie~k--~~~--l~~~~~~~d~~~~~~~a~el~~~L~~~l~~~~v 722 (831)
. .+.... + .+..+++...+..+.. .+... ... ....+.. . ..+++...++.. ...+
T Consensus 78 ~~~~~~~~---~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~---~~~~~~~~l~~~--~~~~ 140 (230)
T PRK01158 78 KRIFLGDI---E-----ECEKAYSELKKRFPEASTSLTKLDPDYRKTEVALRRT----V---PVEEVRELLEEL--GLDL 140 (230)
T ss_pred CEEEEcch---H-----HHHHHHHHHHHhccccceeeecCCcccccceeeeccc----c---cHHHHHHHHHHc--CCcE
Confidence 2 233221 1 1222232222211111 01100 000 0000110 0 112233333322 2234
Q ss_pred EEEEcCeEEEEEeCCCCHHHHHHHHHHHhhhcCCCcccEEEEcCCchhHHHHHHcchhcCCCCCCCCCceEEEEeCCC--
Q 044635 723 TVKSGQNLVEVKPQGVNKGLVAKRLLSTMQEREMLPDFVLCVGDDRSDEDMFEVIISSMAGPSIAPRAEVFACTVGRK-- 800 (831)
Q Consensus 723 ~v~~g~~~vEV~p~gvnKG~al~~Ll~~l~~~g~~~d~vla~GD~~NDe~Mf~~a~~~~~~~~~~~~~~~~~v~vG~~-- 800 (831)
.+..+..++||.|+++|||.|++++++++ |++++++++|||+.||++||+.++ ++++|||+
T Consensus 141 ~~~~~~~~~ei~~~~~~Kg~al~~l~~~~---~i~~~~~i~~GD~~NDi~m~~~ag--------------~~vam~Na~~ 203 (230)
T PRK01158 141 EIVDSGFAIHIKSPGVNKGTGLKKLAELM---GIDPEEVAAIGDSENDLEMFEVAG--------------FGVAVANADE 203 (230)
T ss_pred EEEecceEEEEeeCCCChHHHHHHHHHHh---CCCHHHEEEECCchhhHHHHHhcC--------------ceEEecCccH
Confidence 55556678999999999999999999998 999999999999999999999997 46788876
Q ss_pred --CcccceEe--CChhHHHHHHHHHH
Q 044635 801 --PSKAKYYL--DDTVEIVRLMQGLA 822 (831)
Q Consensus 801 --~s~A~y~l--~d~~eV~~~L~~L~ 822 (831)
+..|+|++ ++.++|++.|+++.
T Consensus 204 ~vk~~a~~v~~~n~~~Gv~~~l~~~~ 229 (230)
T PRK01158 204 ELKEAADYVTEKSYGEGVAEAIEHLL 229 (230)
T ss_pred HHHHhcceEecCCCcChHHHHHHHHh
Confidence 46789987 46788999998763
No 27
>PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification []. This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A ....
Probab=99.92 E-value=3.5e-24 Score=225.80 Aligned_cols=217 Identities=19% Similarity=0.279 Sum_probs=157.3
Q ss_pred EEecCCCccCCCCCCCCCCCHHHHHHHHHHhhcCCCeEEEECCCCHhhHHHHhCCCC-CceEEecCCEEEEeCCCceEEE
Q 044635 576 ILLDYDGTLMPQASIDKSPNSKTIDILNSLCRDKNNMVFLVSAKSRKTLAEWFSPCE-NLGIAAEHGYFFRLRRDEEWET 654 (831)
Q Consensus 576 i~~D~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~~~-~~~liaenGa~i~~~~~~~w~~ 654 (831)
||+|+||||++ .+..++++++++|++|.+ .|+.++++|||++..+.+++..+. ..++|+.||+++....+.....
T Consensus 1 i~~DlDGTLl~---~~~~i~~~~~~al~~l~~-~g~~~~i~TGR~~~~~~~~~~~~~~~~~~I~~nGa~i~~~~~~~l~~ 76 (254)
T PF08282_consen 1 IFSDLDGTLLN---SDGKISPETIEALKELQE-KGIKLVIATGRSYSSIKRLLKELGIDDYFICSNGALIDDPKGKILYE 76 (254)
T ss_dssp EEEECCTTTCS---TTSSSCHHHHHHHHHHHH-TTCEEEEECSSTHHHHHHHHHHTTHCSEEEEGGGTEEEETTTEEEEE
T ss_pred cEEEECCceec---CCCeeCHHHHHHHHhhcc-cceEEEEEccCcccccccccccccchhhhcccccceeeecccccchh
Confidence 79999999999 677799999999999987 599999999999999999998774 4699999999995554444332
Q ss_pred cCCcCCccHHHHHHHHHHHHhccCCCeeEeeccceEE------------------Ee-ecc----CCCc-------cchH
Q 044635 655 CIPVADCGWKQIAEPVMKLYTETTDGSTIEDKETALV------------------WS-YED----ADPD-------FGSC 704 (831)
Q Consensus 655 ~~~~~~~~w~~~v~~il~~~~e~~~gs~ie~k~~~l~------------------~~-~~~----~d~~-------~~~~ 704 (831)
.. .+ .+.+..+++...+..-...+...+.... +. ... .... ....
T Consensus 77 ~~--i~---~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ki~~~~~~~ 151 (254)
T PF08282_consen 77 KP--ID---SDDVKKILKYLKEHNISFFFYTDDDIYIYENKDEEELFFEHKFFNFKESIVSEDDLEDEEIFKILFFPDPE 151 (254)
T ss_dssp ES--B----HHHHHHHHHHHHHTTCEEEEEESSEEEESSTTCHHHHHHHHHHTSCEEEESHHHHHHCSSESEEEEESCHH
T ss_pred hh--ee---ccchhheeehhhhcccccccccceeeecccccccchhhhhhcccccccccccccccccccceeeeccccch
Confidence 21 11 3445555555443211111111100000 00 000 0000 0123
Q ss_pred HHHHHHHHHHhHhcCCCeEEEEcCeEEEEEeCCCCHHHHHHHHHHHhhhcCCCcccEEEEcCCchhHHHHHHcchhcCCC
Q 044635 705 QAKELLDHLESVLANEPVTVKSGQNLVEVKPQGVNKGLVAKRLLSTMQEREMLPDFVLCVGDDRSDEDMFEVIISSMAGP 784 (831)
Q Consensus 705 ~a~el~~~L~~~l~~~~v~v~~g~~~vEV~p~gvnKG~al~~Ll~~l~~~g~~~d~vla~GD~~NDe~Mf~~a~~~~~~~ 784 (831)
+..++.+++.+.+.+....+.++..++||+|+++|||.|+++|++++ |++++++++|||+.||++||+.++
T Consensus 152 ~~~~l~~~l~~~~~~~~~~~~~~~~~lei~~~~vsK~~ai~~l~~~~---~i~~~~~~~~GD~~ND~~Ml~~~~------ 222 (254)
T PF08282_consen 152 DLEQLREELKKKFPNLIDVVRSSPYFLEITPKGVSKGSAIKYLLEYL---GISPEDIIAFGDSENDIEMLELAG------ 222 (254)
T ss_dssp HHHHHHHHHHHHHTTTEEEEEEETTEEEEEETTSSHHHHHHHHHHHH---TTSGGGEEEEESSGGGHHHHHHSS------
T ss_pred hhhhhhhhhccccCcceeEEEecccceEEeeCCCCHHHHHHHHhhhc---ccccceeEEeecccccHhHHhhcC------
Confidence 55677778887776544667789999999999999999999999999 999999999999999999999997
Q ss_pred CCCCCCceEEEEeCCC----CcccceEeCC--hhHHHHHH
Q 044635 785 SIAPRAEVFACTVGRK----PSKAKYYLDD--TVEIVRLM 818 (831)
Q Consensus 785 ~~~~~~~~~~v~vG~~----~s~A~y~l~d--~~eV~~~L 818 (831)
++|+||++ +..|++++.+ .++|++.|
T Consensus 223 --------~~~am~na~~~~k~~a~~i~~~~~~~gv~~~i 254 (254)
T PF08282_consen 223 --------YSVAMGNATPELKKAADYITPSNNDDGVAKAI 254 (254)
T ss_dssp --------EEEEETTS-HHHHHHSSEEESSGTCTHHHHHH
T ss_pred --------eEEEEcCCCHHHHHhCCEEecCCCCChHHHhC
Confidence 57899987 5789998753 37787765
No 28
>TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB. The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear.
Probab=99.92 E-value=1.1e-24 Score=223.80 Aligned_cols=192 Identities=28% Similarity=0.376 Sum_probs=149.9
Q ss_pred eEEecCCCccCCCCCCC-CCCCHHHHHHHHHHhhcCCCeEEEECCCCHhhHHHHhCCCCCceEEecCCEEEEeCCCceEE
Q 044635 575 AILLDYDGTLMPQASID-KSPNSKTIDILNSLCRDKNNMVFLVSAKSRKTLAEWFSPCENLGIAAEHGYFFRLRRDEEWE 653 (831)
Q Consensus 575 li~~D~DGTLl~~~~~~-~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~~~~~~liaenGa~i~~~~~~~w~ 653 (831)
||++|+||||++ .+ ..+++++.++|++|+++ |+.|+|+|||+...+..+++.+ +.++|++||++++.+++..|.
T Consensus 1 li~~D~DgTL~~---~~~~~~~~~~~~~l~~l~~~-g~~~~i~TGR~~~~~~~~~~~~-~~~~i~~nGa~i~~~~~~~~~ 75 (204)
T TIGR01484 1 LLFFDLDGTLLD---PNAHELSPETIEALERLREA-GVKVVLVTGRSLAEIKELLKQL-PLPLIAENGALIFYPGEILYI 75 (204)
T ss_pred CEEEeCcCCCcC---CCCCcCCHHHHHHHHHHHHC-CCEEEEECCCCHHHHHHHHHhC-CCCEEECCCcEEEECCEEEEE
Confidence 689999999998 44 67999999999999884 7999999999999999999874 588999999999987666665
Q ss_pred EcCCcCCccHHH------HHHHHHHHHhccCCCeeEeeccceEEEeeccCCCccchHHHHHHHHHHHhHhcC-CCeEEE-
Q 044635 654 TCIPVADCGWKQ------IAEPVMKLYTETTDGSTIEDKETALVWSYEDADPDFGSCQAKELLDHLESVLAN-EPVTVK- 725 (831)
Q Consensus 654 ~~~~~~~~~w~~------~v~~il~~~~e~~~gs~ie~k~~~l~~~~~~~d~~~~~~~a~el~~~L~~~l~~-~~v~v~- 725 (831)
. . ...|.. .+..++..+.+.+++..++.+...+.+++... ........++...++....+ ..+.+.
T Consensus 76 ~--~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (204)
T TIGR01484 76 E--P--SDVFEEILGIKEEIGAELKSLSEHYVGTFIEDKAIAVAIHYVGA--ELGQELDSKMRERLEKIGRNDLELEAIY 149 (204)
T ss_pred c--c--cccHHHHHHhhhhcCceeeeeccccccceeecccceeeEEEecc--chhhHHHHHHHHHHHhhccccCcEEEEE
Confidence 4 1 122332 22334444555677888888889999998864 11112234555555554322 346666
Q ss_pred EcCeEEEEEeCCCCHHHHHHHHHHHhhhcCCCcccEEEEcCCchhHHHHHHcchh
Q 044635 726 SGQNLVEVKPQGVNKGLVAKRLLSTMQEREMLPDFVLCVGDDRSDEDMFEVIISS 780 (831)
Q Consensus 726 ~g~~~vEV~p~gvnKG~al~~Ll~~l~~~g~~~d~vla~GD~~NDe~Mf~~a~~~ 780 (831)
++..++||+|++++||.+++.+++++ +++++++++|||+.||++||+.++.+
T Consensus 150 s~~~~~ev~p~~~~K~~~~~~~~~~~---~~~~~~~~~~GD~~nD~~~~~~~~~~ 201 (204)
T TIGR01484 150 VGKTDLEVLPAGVDKGSALQALLKEL---NGKRDEILAFGDSGNDEEMFEVAGLA 201 (204)
T ss_pred ecCCEEEEecCCCChHHHHHHHHHHh---CCCHHHEEEEcCCHHHHHHHHHcCCc
Confidence 79999999999999999999999998 89999999999999999999999864
No 29
>PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional
Probab=99.91 E-value=2.9e-23 Score=222.82 Aligned_cols=221 Identities=18% Similarity=0.275 Sum_probs=150.7
Q ss_pred CceeEEecCCCccCCCCCCCCCCCHHHHHHHHHHhhcCCCeEEEECCCCHhhHHHHhCCCC-CceEEecCCEEEEeCC-C
Q 044635 572 TTRAILLDYDGTLMPQASIDKSPNSKTIDILNSLCRDKNNMVFLVSAKSRKTLAEWFSPCE-NLGIAAEHGYFFRLRR-D 649 (831)
Q Consensus 572 ~~rli~~D~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~~~-~~~liaenGa~i~~~~-~ 649 (831)
++|+|++|+||||++ .++.++++++++|++|.+ +|+.|+|||||+...+...+..+. ..++|+.||+.+++.. +
T Consensus 2 ~~kli~~DlDGTLl~---~~~~i~~~~~~ai~~~~~-~G~~~~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~i~d~~~~ 77 (272)
T PRK10530 2 TYRVIALDLDGTLLT---PKKTILPESLEALARARE-AGYKVIIVTGRHHVAIHPFYQALALDTPAICCNGTYLYDYQAK 77 (272)
T ss_pred CccEEEEeCCCceEC---CCCccCHHHHHHHHHHHH-CCCEEEEEcCCChHHHHHHHHhcCCCCCEEEcCCcEEEecCCC
Confidence 468999999999998 677899999999999987 699999999999999999888773 4469999999999753 3
Q ss_pred ceE-EEcCCcCCccHHHHHHHHHHHHhccCCCeeEeeccceE------------EEe----------eccCCC-------
Q 044635 650 EEW-ETCIPVADCGWKQIAEPVMKLYTETTDGSTIEDKETAL------------VWS----------YEDADP------- 699 (831)
Q Consensus 650 ~~w-~~~~~~~~~~w~~~v~~il~~~~e~~~gs~ie~k~~~l------------~~~----------~~~~d~------- 699 (831)
..+ ...++ .+.+.++++...+..-...+...+..+ .|. +...+.
T Consensus 78 ~~l~~~~l~------~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (272)
T PRK10530 78 KVLEADPLP------VQQALQVIEMLDEHQIHGLMYVDDAMLYEHPTGHVIRTLNWAQTLPPEQRPTFTQVDSLAQAARQ 151 (272)
T ss_pred EEEEecCCC------HHHHHHHHHHHHhCCcEEEEEcCCceEecCchHHHHHHhhhhhccchhcccceEEcccHHHHHhh
Confidence 333 22222 244555555443221111111000000 000 000000
Q ss_pred -c--c--c-----hHHHHHHHHHHHhHhcCCCeE-EEEcCeEEEEEeCCCCHHHHHHHHHHHhhhcCCCcccEEEEcCCc
Q 044635 700 -D--F--G-----SCQAKELLDHLESVLANEPVT-VKSGQNLVEVKPQGVNKGLVAKRLLSTMQEREMLPDFVLCVGDDR 768 (831)
Q Consensus 700 -~--~--~-----~~~a~el~~~L~~~l~~~~v~-v~~g~~~vEV~p~gvnKG~al~~Ll~~l~~~g~~~d~vla~GD~~ 768 (831)
. + . ....+++.+.+.+ ...+. ..++..++||.|+++|||.|++++++++ |++++++++|||+.
T Consensus 152 ~~~~~~i~~~~~~~~~~~~~~~~~~~---~~~~~~~~s~~~~~ei~~~~~~K~~~l~~l~~~~---gi~~~e~i~~GD~~ 225 (272)
T PRK10530 152 VNAIWKFALTHEDLPQLQHFAKHVEH---ELGLECEWSWHDQVDIARKGNSKGKRLTQWVEAQ---GWSMKNVVAFGDNF 225 (272)
T ss_pred cCCcEEEEEecCCHHHHHHHHHHHhh---hcCceEEEecCceEEEecCCCChHHHHHHHHHHc---CCCHHHeEEeCCCh
Confidence 0 0 0 0011122222222 22222 3345678999999999999999999998 99999999999999
Q ss_pred hhHHHHHHcchhcCCCCCCCCCceEEEEeCCC----CcccceEe--CChhHHHHHHHHHH
Q 044635 769 SDEDMFEVIISSMAGPSIAPRAEVFACTVGRK----PSKAKYYL--DDTVEIVRLMQGLA 822 (831)
Q Consensus 769 NDe~Mf~~a~~~~~~~~~~~~~~~~~v~vG~~----~s~A~y~l--~d~~eV~~~L~~L~ 822 (831)
||++||+.++ ++|+||++ +..|+|++ ++.++|.++|+++.
T Consensus 226 NDi~m~~~ag--------------~~vamgna~~~lk~~Ad~v~~~n~~dGv~~~l~~~~ 271 (272)
T PRK10530 226 NDISMLEAAG--------------LGVAMGNADDAVKARADLVIGDNTTPSIAEFIYSHV 271 (272)
T ss_pred hhHHHHHhcC--------------ceEEecCchHHHHHhCCEEEecCCCCcHHHHHHHHh
Confidence 9999999998 46788875 46788887 46789999998864
No 30
>TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily. The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences.
Probab=99.90 E-value=5.8e-23 Score=218.78 Aligned_cols=217 Identities=20% Similarity=0.278 Sum_probs=147.2
Q ss_pred eEEecCCCccCCCCCCCCCCCHHHHHHHHHHhhcCCCeEEEECCCCHhhHHHHhCCCC-CceEEecCCEEEEeCCCc-eE
Q 044635 575 AILLDYDGTLMPQASIDKSPNSKTIDILNSLCRDKNNMVFLVSAKSRKTLAEWFSPCE-NLGIAAEHGYFFRLRRDE-EW 652 (831)
Q Consensus 575 li~~D~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~~~-~~~liaenGa~i~~~~~~-~w 652 (831)
+|++|+||||++ .++.++++++++|++|.+ .|+.|+|+|||+...+.+.+..+. ..++|+.||+.++..++. .+
T Consensus 1 li~~DlDGTLl~---~~~~i~~~~~~~i~~l~~-~G~~~~iaTGR~~~~~~~~~~~~~~~~~~I~~NGa~i~~~~~~~i~ 76 (256)
T TIGR00099 1 LIFIDLDGTLLN---DDHTISPSTKEALAKLRE-KGIKVVLATGRPYKEVKNILKELGLDTPFITANGAAVIDDQGEILY 76 (256)
T ss_pred CEEEeCCCCCCC---CCCccCHHHHHHHHHHHH-CCCeEEEEeCCCHHHHHHHHHHcCCCCCEEEcCCcEEECCCCCEEe
Confidence 689999999999 677899999999999987 599999999999999999888773 348999999999976433 33
Q ss_pred EEcCCcCCccHHHHHHHHHHHHhccC--------CCeeEeeccce-EEEe----ecc---C-CC-----c-c-------c
Q 044635 653 ETCIPVADCGWKQIAEPVMKLYTETT--------DGSTIEDKETA-LVWS----YED---A-DP-----D-F-------G 702 (831)
Q Consensus 653 ~~~~~~~~~~w~~~v~~il~~~~e~~--------~gs~ie~k~~~-l~~~----~~~---~-d~-----~-~-------~ 702 (831)
...++ .+.+.++++.+.+.. .+.|+...... +... +.. . +. + + .
T Consensus 77 ~~~i~------~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (256)
T TIGR00099 77 KKPLD------LDLVEEILNFLKKHGLDVILYGDDSIYASKNDPEYFTIFKKFLGEPKLEVVDIQYLPDDILKILLLFLD 150 (256)
T ss_pred ecCCC------HHHHHHHHHHHHHcCcEEEEEeCCeEEecCCCcchhHHHHHhccCCcceeccchhhhcccceEEEEECC
Confidence 33332 244555555443321 11222111000 0000 000 0 00 0 0 0
Q ss_pred hHHHHHHHHHHHh-HhcCCCeEEEEcCeEEEEEeCCCCHHHHHHHHHHHhhhcCCCcccEEEEcCCchhHHHHHHcchhc
Q 044635 703 SCQAKELLDHLES-VLANEPVTVKSGQNLVEVKPQGVNKGLVAKRLLSTMQEREMLPDFVLCVGDDRSDEDMFEVIISSM 781 (831)
Q Consensus 703 ~~~a~el~~~L~~-~l~~~~v~v~~g~~~vEV~p~gvnKG~al~~Ll~~l~~~g~~~d~vla~GD~~NDe~Mf~~a~~~~ 781 (831)
.....++...+.+ .+......+.++..++||+|+++|||.|++++++.+ |++++++++|||+.||++||+.++.
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~leI~~~~~~K~~~i~~~~~~~---~~~~~~~~~~GD~~nD~~m~~~~~~-- 225 (256)
T TIGR00099 151 PEDLDLLIEALNKLELEENVSVVSSGPYSIEITAKGVSKGSALQSLAEAL---GISLEDVIAFGDGMNDIEMLEAAGY-- 225 (256)
T ss_pred HHHHHHHHHHhhhhhhcCCEEEEEecCceEEecCCCCChHHHHHHHHHHc---CCCHHHEEEeCCcHHhHHHHHhCCc--
Confidence 1122333344432 122221234577889999999999999999999998 9999999999999999999999984
Q ss_pred CCCCCCCCCceEEEEeCCC----CcccceEeC--ChhHHHHHH
Q 044635 782 AGPSIAPRAEVFACTVGRK----PSKAKYYLD--DTVEIVRLM 818 (831)
Q Consensus 782 ~~~~~~~~~~~~~v~vG~~----~s~A~y~l~--d~~eV~~~L 818 (831)
+|+||++ +..|+|++. +.++|.++|
T Consensus 226 ------------~~a~~na~~~~k~~a~~~~~~n~~dGV~~~l 256 (256)
T TIGR00099 226 ------------GVAMGNADEELKALADYVTDSNNEDGVALAL 256 (256)
T ss_pred ------------eeEecCchHHHHHhCCEEecCCCCcchhhhC
Confidence 5777775 467888874 567777653
No 31
>TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily. catalyze the same reaction as SPP.
Probab=99.90 E-value=5.7e-23 Score=214.25 Aligned_cols=211 Identities=21% Similarity=0.226 Sum_probs=143.2
Q ss_pred EEecCCCccCCCCCCCCCCCHHHHHHHHHHhhcCCCeEEEECCCCHhhHHHHhCCCC-CceEEecCCEEEEeCCC--ceE
Q 044635 576 ILLDYDGTLMPQASIDKSPNSKTIDILNSLCRDKNNMVFLVSAKSRKTLAEWFSPCE-NLGIAAEHGYFFRLRRD--EEW 652 (831)
Q Consensus 576 i~~D~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~~~-~~~liaenGa~i~~~~~--~~w 652 (831)
|++|+||||++ .++.+++++.++|++|.+ .|+.|++||||+...+.+++..+. ..++|++||+.|+..++ ..|
T Consensus 1 i~~DlDGTLl~---~~~~i~~~~~~al~~l~~-~Gi~~~~aTGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~~~~ 76 (225)
T TIGR01482 1 IASDIDGTLTD---PNRAINESALEAIRKAES-VGIPVVLVTGNSVQFARALAKLIGTPDPVIAENGGEISYNEGMDDIF 76 (225)
T ss_pred CeEeccCccCC---CCcccCHHHHHHHHHHHH-CCCEEEEEcCCchHHHHHHHHHhCCCCeEEEecCcEEEeCCCCceEE
Confidence 68999999998 667899999999999976 699999999999999988887764 56899999999988653 345
Q ss_pred EEcCCcCCccHHHHHHHHHHHHhccCCCeeEeeccceEEEeeccCCCccchHHHHHHHHHHHhHhcCCCeEEEEcCeEEE
Q 044635 653 ETCIPVADCGWKQIAEPVMKLYTETTDGSTIEDKETALVWSYEDADPDFGSCQAKELLDHLESVLANEPVTVKSGQNLVE 732 (831)
Q Consensus 653 ~~~~~~~~~~w~~~v~~il~~~~e~~~gs~ie~k~~~l~~~~~~~d~~~~~~~a~el~~~L~~~l~~~~v~v~~g~~~vE 732 (831)
...+ +..|................-.+ .. ...........++ ..+.++..+ +.. .+.+.++..++|
T Consensus 77 ~~~~---~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~----~~~~~~~~~----~~~-~~~~~~~~~~~e 142 (225)
T TIGR01482 77 LAYL---EEEWFLDIVIAKTFPFSRLKVQY-PR-RASLVKMRYGIDV----DTVREIIKE----LGL-NLVAVDSGFDIH 142 (225)
T ss_pred eccc---CHHHHHHHHHhcccchhhhcccc-cc-ccceEEEeecCCH----HHHHHHHHh----cCc-eEEEecCCcEEE
Confidence 4332 22343221111100000000000 00 0011111111111 112222222 211 233335667999
Q ss_pred EEeCCCCHHHHHHHHHHHhhhcCCCcccEEEEcCCchhHHHHHHcchhcCCCCCCCCCceEEEEeCCC----CcccceEe
Q 044635 733 VKPQGVNKGLVAKRLLSTMQEREMLPDFVLCVGDDRSDEDMFEVIISSMAGPSIAPRAEVFACTVGRK----PSKAKYYL 808 (831)
Q Consensus 733 V~p~gvnKG~al~~Ll~~l~~~g~~~d~vla~GD~~NDe~Mf~~a~~~~~~~~~~~~~~~~~v~vG~~----~s~A~y~l 808 (831)
|+|+++|||.+++++++++ |++++++++|||+.||++||+.++ ++++|||+ +..|+|++
T Consensus 143 i~~~~~~K~~~i~~l~~~~---~i~~~~~i~~GD~~NDi~m~~~ag--------------~~vam~Na~~~~k~~A~~vt 205 (225)
T TIGR01482 143 ILPQGVNKGVAVKKLKEKL---GIKPGETLVCGDSENDIDLFEVPG--------------FGVAVANAQPELKEWADYVT 205 (225)
T ss_pred EeeCCCCHHHHHHHHHHHh---CCCHHHEEEECCCHhhHHHHHhcC--------------ceEEcCChhHHHHHhcCeec
Confidence 9999999999999999998 999999999999999999999998 46888886 57899987
Q ss_pred C--ChhH----HHHHHHHH
Q 044635 809 D--DTVE----IVRLMQGL 821 (831)
Q Consensus 809 ~--d~~e----V~~~L~~L 821 (831)
. +.++ |.+.|+++
T Consensus 206 ~~~~~~G~~~~v~~~l~~~ 224 (225)
T TIGR01482 206 ESPYGEGGAEAIGEILQAI 224 (225)
T ss_pred CCCCCCcHHHHHHHHHHhh
Confidence 4 5677 88888765
No 32
>TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.
Probab=99.90 E-value=4.4e-23 Score=218.74 Aligned_cols=221 Identities=17% Similarity=0.247 Sum_probs=150.7
Q ss_pred eeEEecCCCccCCCCCCCCCCCHHHHHHHHHHhhcCCCeEEEECCCCHhhHHHHhCCC---CCceEEecCCEEEEeCCC-
Q 044635 574 RAILLDYDGTLMPQASIDKSPNSKTIDILNSLCRDKNNMVFLVSAKSRKTLAEWFSPC---ENLGIAAEHGYFFRLRRD- 649 (831)
Q Consensus 574 rli~~D~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~~---~~~~liaenGa~i~~~~~- 649 (831)
.+|++|+||||+++...+...++++.++++++.+ +|+.|+++|||+...+..+...+ ....+|++||+.|+.++.
T Consensus 2 ~li~tDlDGTLl~~~~~~~~~~~~~~~~i~~~~~-~gi~fv~aTGR~~~~~~~~~~~~~~~~p~~~I~~NGa~I~~~~~~ 80 (249)
T TIGR01485 2 LLLVSDLDNTLVDHTDGDNQALLRLNALLEDHRG-EDSLLVYSTGRSPHSYKELQKQKPLLTPDIWVTSVGSEIYYGGAE 80 (249)
T ss_pred eEEEEcCCCcCcCCCCCChHHHHHHHHHHHHhhc-cCceEEEEcCCCHHHHHHHHhcCCCCCCCEEEEcCCceEEeCCCC
Confidence 5899999999997433456678999999999976 68999999999999999886543 233589999999987541
Q ss_pred ---ceEEEcCCcCCccHH-HHHHHHHHHHhccCCCeeEeeccceEEEeeccCCCccchHHHHHHHHHHHhHhcCC--Ce-
Q 044635 650 ---EEWETCIPVADCGWK-QIAEPVMKLYTETTDGSTIEDKETALVWSYEDADPDFGSCQAKELLDHLESVLANE--PV- 722 (831)
Q Consensus 650 ---~~w~~~~~~~~~~w~-~~v~~il~~~~e~~~gs~ie~k~~~l~~~~~~~d~~~~~~~a~el~~~L~~~l~~~--~v- 722 (831)
..|... ....|. +.+..+...+...++....+.+...+.+..... .+.++...+.+.+... .+
T Consensus 81 ~~~~~~~~~---~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~k~~~~~~~~-------~~~~~~~~l~~~l~~~~~~~~ 150 (249)
T TIGR01485 81 VPDQHWAEY---LSEKWQRDIVVAITDKFEELKPQPDLEQRPHKVSFFLDPE-------AAPEVIKQLTEMLKETGLDVK 150 (249)
T ss_pred cCCHHHHHH---HhcccCHHHHHHHHhcCcccccCCccccCCeeEEEEechh-------hhhHHHHHHHHHHHhcCCCEE
Confidence 111111 112343 223334333433334433344445555543321 1223344444444332 23
Q ss_pred EEEEcCeEEEEEeCCCCHHHHHHHHHHHhhhcCCCcccEEEEcCCchhHHHHHHcchhcCCCCCCCCCceEEEEeCCCCc
Q 044635 723 TVKSGQNLVEVKPQGVNKGLVAKRLLSTMQEREMLPDFVLCVGDDRSDEDMFEVIISSMAGPSIAPRAEVFACTVGRKPS 802 (831)
Q Consensus 723 ~v~~g~~~vEV~p~gvnKG~al~~Ll~~l~~~g~~~d~vla~GD~~NDe~Mf~~a~~~~~~~~~~~~~~~~~v~vG~~~s 802 (831)
.+.++..++||+|+++|||.|++++++++ |++++++++|||+.||++||+.++. .+|+|+|+..
T Consensus 151 ~~~~~~~~ldi~~~~~~K~~al~~l~~~~---~i~~~~~i~~GD~~ND~~ml~~~~~-------------~~va~~na~~ 214 (249)
T TIGR01485 151 LIYSSGKDLDILPQGSGKGQALQYLLQKL---AMEPSQTLVCGDSGNDIELFEIGSV-------------RGVIVSNAQE 214 (249)
T ss_pred EEEECCceEEEEeCCCChHHHHHHHHHHc---CCCccCEEEEECChhHHHHHHccCC-------------cEEEECCCHH
Confidence 34678899999999999999999999998 9999999999999999999998431 4677887621
Q ss_pred ----cc-------ceEeC--ChhHHHHHHHHH
Q 044635 803 ----KA-------KYYLD--DTVEIVRLMQGL 821 (831)
Q Consensus 803 ----~A-------~y~l~--d~~eV~~~L~~L 821 (831)
.| .|+.+ .++++++.|+.+
T Consensus 215 ~~k~~~~~~~~~~~~~~~~~~~~Gi~e~l~~~ 246 (249)
T TIGR01485 215 ELLQWYDENAKDKIYHASERCAGGIIEAIAHF 246 (249)
T ss_pred HHHHHHHhcccCcEEEecCCCcHHHHHHHHHc
Confidence 21 15554 468899888875
No 33
>TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal. TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases.
Probab=99.90 E-value=1.2e-22 Score=210.46 Aligned_cols=208 Identities=19% Similarity=0.267 Sum_probs=141.4
Q ss_pred ceeEEecCCCccCCCCCCCCCCCHHHHHHHHHHhhcCCCeEEEECCCCHhhHHHHhCCCC-CceEEecCCEEEEeCCCce
Q 044635 573 TRAILLDYDGTLMPQASIDKSPNSKTIDILNSLCRDKNNMVFLVSAKSRKTLAEWFSPCE-NLGIAAEHGYFFRLRRDEE 651 (831)
Q Consensus 573 ~rli~~D~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~~~-~~~liaenGa~i~~~~~~~ 651 (831)
+|+|++|+||||++ .++.+++++.++|++|++ +|+.|+++|||++..+..++..+. ..++|++||+.+++.++..
T Consensus 1 ik~v~~DlDGTLl~---~~~~i~~~~~~~i~~l~~-~g~~~~~~TGR~~~~~~~~~~~l~~~~~~i~~NGa~i~~~~~~~ 76 (215)
T TIGR01487 1 IKLVAIDIDGTLTE---PNRMISERAIEAIRKAEK-KGIPVSLVTGNTVPFARALAVLIGTSGPVVAENGGVIFYNKEDI 76 (215)
T ss_pred CcEEEEecCCCcCC---CCcccCHHHHHHHHHHHH-CCCEEEEEcCCcchhHHHHHHHhCCCCcEEEccCcEEEeCCCcE
Confidence 47999999999998 677899999999999977 699999999999999999887774 3479999999999865432
Q ss_pred EEEcCCcCCccHHHHHHHHHHHHhccCCCeeEeeccceEEEeeccCCCccchHHHHHHHHHHHhHhcCCCeEEEEcCeEE
Q 044635 652 WETCIPVADCGWKQIAEPVMKLYTETTDGSTIEDKETALVWSYEDADPDFGSCQAKELLDHLESVLANEPVTVKSGQNLV 731 (831)
Q Consensus 652 w~~~~~~~~~~w~~~v~~il~~~~e~~~gs~ie~k~~~l~~~~~~~d~~~~~~~a~el~~~L~~~l~~~~v~v~~g~~~v 731 (831)
.. . .....|....... ..+....-.. ........+... .+ ..+.+...++ ...+.+..+..++
T Consensus 77 ~~--~-~~~~~~~~~~~~~-~~~~~~~~~~--~~~~~~~~~~~~--~~-----~~~~~~~~l~----~~~~~~~~~~~~~ 139 (215)
T TIGR01487 77 FL--A-NMEEEWFLDEEKK-KRFPRDRLSN--EYPRASLVIMRE--GK-----DVDEVREIIK----ERGLNLVDSGFAI 139 (215)
T ss_pred EE--e-cccchhhHHHhhh-hhhhhhhccc--ccceeEEEEecC--Cc-----cHHHHHHHHH----hCCeEEEecCceE
Confidence 11 1 1111221100000 0010000000 000011111111 00 1123333332 2344555566789
Q ss_pred EEEeCCCCHHHHHHHHHHHhhhcCCCcccEEEEcCCchhHHHHHHcchhcCCCCCCCCCceEEEEeCCC----CcccceE
Q 044635 732 EVKPQGVNKGLVAKRLLSTMQEREMLPDFVLCVGDDRSDEDMFEVIISSMAGPSIAPRAEVFACTVGRK----PSKAKYY 807 (831)
Q Consensus 732 EV~p~gvnKG~al~~Ll~~l~~~g~~~d~vla~GD~~NDe~Mf~~a~~~~~~~~~~~~~~~~~v~vG~~----~s~A~y~ 807 (831)
||.|.+++||.+++++++++ |++++++++|||+.||++||+.++ ++|+|||+ +..|+|+
T Consensus 140 ei~~~~~~K~~~i~~l~~~~---~i~~~~~i~iGDs~ND~~ml~~ag--------------~~vam~na~~~~k~~A~~v 202 (215)
T TIGR01487 140 HIMKKGVDKGVGVEKLKELL---GIKPEEVAAIGDSENDIDLFRVVG--------------FKVAVANADDQLKEIADYV 202 (215)
T ss_pred EEecCCCChHHHHHHHHHHh---CCCHHHEEEECCCHHHHHHHHhCC--------------CeEEcCCccHHHHHhCCEE
Confidence 99999999999999999998 999999999999999999999998 46788876 5788998
Q ss_pred eC--ChhHHHHHH
Q 044635 808 LD--DTVEIVRLM 818 (831)
Q Consensus 808 l~--d~~eV~~~L 818 (831)
+. +.++|.++|
T Consensus 203 ~~~~~~~Gv~~~l 215 (215)
T TIGR01487 203 TSNPYGEGVVEVL 215 (215)
T ss_pred cCCCCCchhhhhC
Confidence 84 567777653
No 34
>TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family. This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta
Probab=99.89 E-value=3.3e-22 Score=212.97 Aligned_cols=219 Identities=16% Similarity=0.078 Sum_probs=146.4
Q ss_pred eEEecCCCccCCCCCCCCCCCHHHHHHHHHHhhcCCCeEEEECCCCHhhHHHHhCCCC-CceEEecCCEEEEeCCCce--
Q 044635 575 AILLDYDGTLMPQASIDKSPNSKTIDILNSLCRDKNNMVFLVSAKSRKTLAEWFSPCE-NLGIAAEHGYFFRLRRDEE-- 651 (831)
Q Consensus 575 li~~D~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~~~-~~~liaenGa~i~~~~~~~-- 651 (831)
+|++|+||||++ .++...+.++++|++|.+ .|+.|+++|||+...+..++..+. ..++|++||++|+..++..
T Consensus 1 li~~DlDGTll~---~~~~~~~~~~~~i~~l~~-~g~~~~~~TgR~~~~~~~~~~~~~~~~~~I~~NGa~i~~~~~~~~~ 76 (256)
T TIGR01486 1 WIFTDLDGTLLD---PHGYDWGPAKEVLERLQE-LGIPVIPCTSKTAAEVEYLRKELGLEDPFIVENGGAIYGPRGWFTE 76 (256)
T ss_pred CEEEcCCCCCcC---CCCcCchHHHHHHHHHHH-CCCeEEEEcCCCHHHHHHHHHHcCCCCcEEEcCCeEEEeCCCcccC
Confidence 689999999998 455344579999999977 599999999999999999998774 4689999999999865432
Q ss_pred ---EEEcCCcCCccHHHHHHHHHHHHhccCCCeeEeeccc---------eE-------EEeeccCCCccchHHHHHHHHH
Q 044635 652 ---WETCIPVADCGWKQIAEPVMKLYTETTDGSTIEDKET---------AL-------VWSYEDADPDFGSCQAKELLDH 712 (831)
Q Consensus 652 ---w~~~~~~~~~~w~~~v~~il~~~~e~~~gs~ie~k~~---------~l-------~~~~~~~d~~~~~~~a~el~~~ 712 (831)
|.... ...| +.+.++++.+.+..+..+...... .+ ... .....-+.. ..+....
T Consensus 77 ~~~~~~~~---~i~~-~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~--~~~~~~~ 149 (256)
T TIGR01486 77 PEYPVIAL---GIPY-EKIRARLEELSEELGFKFRGLGDLTDAEIAELTGLSRELAALAQR-REYSETILW--SEERRER 149 (256)
T ss_pred CCeEEEEc---CCCH-HHHHHHHHHHHHHhCCCccchhhCCHHHHHHHhCcCHHHHHHHhh-CccCCceec--ChHHHHH
Confidence 22111 1222 556666665433221111100000 00 000 000000000 1122333
Q ss_pred HHhHhcCCCeEEEEcCeEEEEEeCCCCHHHHHHHHHHHhhhcCCC--cccEEEEcCCchhHHHHHHcchhcCCCCCCCCC
Q 044635 713 LESVLANEPVTVKSGQNLVEVKPQGVNKGLVAKRLLSTMQEREML--PDFVLCVGDDRSDEDMFEVIISSMAGPSIAPRA 790 (831)
Q Consensus 713 L~~~l~~~~v~v~~g~~~vEV~p~gvnKG~al~~Ll~~l~~~g~~--~d~vla~GD~~NDe~Mf~~a~~~~~~~~~~~~~ 790 (831)
+.+.+....+.+..+..++||.|+++|||.|++++++++ |++ .+++++|||+.||++||+.++.
T Consensus 150 ~~~~~~~~~~~~~~s~~~~ei~~~~~~Kg~ai~~l~~~~---~i~~~~~~~~a~GD~~ND~~Ml~~ag~----------- 215 (256)
T TIGR01486 150 FTEALVELGLEVTHGNRFYHVLGAGSDKGKAANALKQFY---NQPGGAIKVVGLGDSPNDLPLLEVVDL----------- 215 (256)
T ss_pred HHHHHHHcCCEEEeCCceEEEecCCCCHHHHHHHHHHHH---hhcCCCceEEEEcCCHhhHHHHHHCCE-----------
Confidence 333333334555556679999999999999999999998 888 9999999999999999999984
Q ss_pred ceEEEEeCCCC-------cc--cc-eEe--CChhHHHHHHHHH
Q 044635 791 EVFACTVGRKP-------SK--AK-YYL--DDTVEIVRLMQGL 821 (831)
Q Consensus 791 ~~~~v~vG~~~-------s~--A~-y~l--~d~~eV~~~L~~L 821 (831)
+|+|||++ .. |. |++ ++.++|.+.|+++
T Consensus 216 ---~vam~Na~~~~~~lk~~~~a~~~vt~~~~~dGva~~l~~~ 255 (256)
T TIGR01486 216 ---AVVVPGPNGPNVSLKPGDPGSFLLTPAPGPEGWREALEHL 255 (256)
T ss_pred ---EEEeCCCCCCccccCccCCCcEEEcCCCCcHHHHHHHHHh
Confidence 66777653 22 34 666 4689999999876
No 35
>PTZ00174 phosphomannomutase; Provisional
Probab=99.88 E-value=2e-21 Score=205.72 Aligned_cols=198 Identities=17% Similarity=0.138 Sum_probs=129.1
Q ss_pred cCceeEEecCCCccCCCCCCCCCCCHHHHHHHHHHhhcCCCeEEEECCCCHhhHHHHhCCC--CC-ceEEecCCEEEEeC
Q 044635 571 TTTRAILLDYDGTLMPQASIDKSPNSKTIDILNSLCRDKNNMVFLVSAKSRKTLAEWFSPC--EN-LGIAAEHGYFFRLR 647 (831)
Q Consensus 571 s~~rli~~D~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~~--~~-~~liaenGa~i~~~ 647 (831)
.+.|+|++|+||||++ .++.++++++++|+++.+ .|+.|+|||||+...+.+.++.. .. .++|+.||+.|+..
T Consensus 3 ~~~klia~DlDGTLL~---~~~~is~~~~~ai~~l~~-~Gi~~viaTGR~~~~i~~~l~~~~~~~~~~~I~~NGa~I~~~ 78 (247)
T PTZ00174 3 MKKTILLFDVDGTLTK---PRNPITQEMKDTLAKLKS-KGFKIGVVGGSDYPKIKEQLGEDVLEDFDYVFSENGLVAYKD 78 (247)
T ss_pred CCCeEEEEECcCCCcC---CCCCCCHHHHHHHHHHHH-CCCEEEEEcCCCHHHHHHHHhhhhhcccCeEEeCCceEEEEC
Confidence 4689999999999999 788899999999999977 69999999999999998888632 22 46899999999975
Q ss_pred CCceEEEcCCc-CCccHHHHHHHHHHHHh-----ccCCCeeEeeccceEEEeec-cCCC-----cc----c-hHHHHHHH
Q 044635 648 RDEEWETCIPV-ADCGWKQIAEPVMKLYT-----ETTDGSTIEDKETALVWSYE-DADP-----DF----G-SCQAKELL 710 (831)
Q Consensus 648 ~~~~w~~~~~~-~~~~w~~~v~~il~~~~-----e~~~gs~ie~k~~~l~~~~~-~~d~-----~~----~-~~~a~el~ 710 (831)
+...+...+.. .+.++...+...++.+. ....+.+++.........+. .... ++ . .....++.
T Consensus 79 ~~~i~~~~i~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (247)
T PTZ00174 79 GELFHSQSILKFLGEEKLKKFINFCLRYIADLDIPVKRGTFIEYRNGMINISPIGRNCSQEERDEFEKYDKEHHIREKFI 158 (247)
T ss_pred CeEEEEEcchhcCCHHHHHHHHHHHHHHHHhcCCccceeeeEEcCCceEEeccccccCCHHHHHHHHhcCCcchHHHHHH
Confidence 43333332211 22233333333332220 11223443332111111110 0000 00 0 11224555
Q ss_pred HHHHhHhcCCCeEEEE-cCeEEEEEeCCCCHHHHHHHHHHHhhhcCCCcccEEEEcC----CchhHHHHHHcch
Q 044635 711 DHLESVLANEPVTVKS-GQNLVEVKPQGVNKGLVAKRLLSTMQEREMLPDFVLCVGD----DRSDEDMFEVIIS 779 (831)
Q Consensus 711 ~~L~~~l~~~~v~v~~-g~~~vEV~p~gvnKG~al~~Ll~~l~~~g~~~d~vla~GD----~~NDe~Mf~~a~~ 779 (831)
+.+.+.+.+..+.... +..++||+|+|+|||.|+++|+++ +++|+|||| +.||++||+.++.
T Consensus 159 ~~l~~~~~~~~~~~s~~~~~~leI~~~gvsKg~al~~L~~~-------~~eviafGD~~~~~~NDieMl~~~~~ 225 (247)
T PTZ00174 159 QDLKKEFSDLGLKFSIGGQISFDVFPKGWDKTYCLRHLEND-------FKEIHFFGDKTFEGGNDYEIYNDPRT 225 (247)
T ss_pred HHHHHhcCCCCeEEEecCceEEEeeeCCCcHHHHHHHHHhh-------hhhEEEEcccCCCCCCcHhhhhcCCC
Confidence 6665555443344343 457999999999999999999987 489999999 8999999998753
No 36
>TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial. Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472.
Probab=99.88 E-value=1.4e-21 Score=205.59 Aligned_cols=214 Identities=18% Similarity=0.247 Sum_probs=146.0
Q ss_pred eEEecCCCccCCCCCCCCCCCHHHHHHHHHHhhcCCCeEEEECCCCHhhHHHHhCCCC---CceEEecCCEEEEeCCCc-
Q 044635 575 AILLDYDGTLMPQASIDKSPNSKTIDILNSLCRDKNNMVFLVSAKSRKTLAEWFSPCE---NLGIAAEHGYFFRLRRDE- 650 (831)
Q Consensus 575 li~~D~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~~~---~~~liaenGa~i~~~~~~- 650 (831)
+|++|+||||++ .++.+++.+ ++++ + .++|+.++++|||+...+.+.+..+. ...+|++||+.|+.....
T Consensus 1 li~~DlDgTLl~---~~~~~~~~~-~~~~-~-~~~gi~~viaTGR~~~~v~~~~~~l~l~~~~~~I~~nGa~i~~~~~~~ 74 (236)
T TIGR02471 1 LIITDLDNTLLG---DDEGLASFV-ELLR-G-SGDAVGFGIATGRSVESAKSRYAKLNLPSPDVLIARVGTEIYYGPELQ 74 (236)
T ss_pred CeEEeccccccC---CHHHHHHHH-HHHH-h-cCCCceEEEEeCCCHHHHHHHHHhCCCCCCCEEEECCCceEEeCCCCC
Confidence 689999999998 566676666 7776 5 44699999999999999999998762 235999999998765321
Q ss_pred ---eEEEcCCcCCccHHHHHHHHHHHHhccCCCeeEeeccc--eEEEeeccCCCccchHHHHHHHHHHHhHhcCCCe-EE
Q 044635 651 ---EWETCIPVADCGWKQIAEPVMKLYTETTDGSTIEDKET--ALVWSYEDADPDFGSCQAKELLDHLESVLANEPV-TV 724 (831)
Q Consensus 651 ---~w~~~~~~~~~~w~~~v~~il~~~~e~~~gs~ie~k~~--~l~~~~~~~d~~~~~~~a~el~~~L~~~l~~~~v-~v 724 (831)
.|... ....|.. ..+ ..+....++..++.+.. ...+++... ++.. ....++...++... ..+ .+
T Consensus 75 ~~~~~~~~---~~~~~~~--~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~-~~~~-~~~~~~~~~l~~~~--~~~~~~ 144 (236)
T TIGR02471 75 PDRFWQKH---IDHDWRR--QAV-VEALADIPGLTLQDDQEQGPFKISYLLD-PEGE-PILPQIRQRLRQQS--QAAKVI 144 (236)
T ss_pred CChhHHHH---HhcCCCH--HHH-HHHHhcCCCcEeCChhcCCCeeEEEEEC-cccc-hHHHHHHHHHHhcc--CCEEEE
Confidence 11100 0111211 112 23333456655554431 244555532 2211 12334444444421 222 34
Q ss_pred EEcCeEEEEEeCCCCHHHHHHHHHHHhhhcCCCcccEEEEcCCchhHHHHHHcchhcCCCCCCCCCceEEEEeCCC----
Q 044635 725 KSGQNLVEVKPQGVNKGLVAKRLLSTMQEREMLPDFVLCVGDDRSDEDMFEVIISSMAGPSIAPRAEVFACTVGRK---- 800 (831)
Q Consensus 725 ~~g~~~vEV~p~gvnKG~al~~Ll~~l~~~g~~~d~vla~GD~~NDe~Mf~~a~~~~~~~~~~~~~~~~~v~vG~~---- 800 (831)
.++..++||+|+++|||.|+++|++++ |++++++++|||+.||++||+.++ ++++||++
T Consensus 145 ~~~~~~~ei~~~~~~K~~al~~l~~~~---g~~~~~~i~~GD~~nD~~ml~~~~--------------~~iav~na~~~~ 207 (236)
T TIGR02471 145 LSCGWFLDVLPLRASKGLALRYLSYRW---GLPLEQILVAGDSGNDEEMLRGLT--------------LGVVVGNHDPEL 207 (236)
T ss_pred EECCceEEEeeCCCChHHHHHHHHHHh---CCCHHHEEEEcCCccHHHHHcCCC--------------cEEEEcCCcHHH
Confidence 567789999999999999999999998 999999999999999999999886 46788886
Q ss_pred Ccccc----eEeC--ChhHHHHHHHHH
Q 044635 801 PSKAK----YYLD--DTVEIVRLMQGL 821 (831)
Q Consensus 801 ~s~A~----y~l~--d~~eV~~~L~~L 821 (831)
+..|+ |+++ +.++|.+.|+.+
T Consensus 208 k~~a~~~~~~v~~~~~~~Gv~~~i~~~ 234 (236)
T TIGR02471 208 EGLRHQQRIYFANNPHAFGILEGINHY 234 (236)
T ss_pred HHhhcCCcEEEcCCCChhHHHHHHHhh
Confidence 45677 6663 567899999865
No 37
>PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=99.87 E-value=3.5e-21 Score=206.97 Aligned_cols=225 Identities=15% Similarity=0.119 Sum_probs=148.6
Q ss_pred CceeEEecCCCccCCCCCCCCCCCHHHHHHHHHHhhcCCCeEEEECCCCHhhHHHHhCCCC-CceEEecCCEEEEeCCCc
Q 044635 572 TTRAILLDYDGTLMPQASIDKSPNSKTIDILNSLCRDKNNMVFLVSAKSRKTLAEWFSPCE-NLGIAAEHGYFFRLRRDE 650 (831)
Q Consensus 572 ~~rli~~D~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~~~-~~~liaenGa~i~~~~~~ 650 (831)
.+|+|++|+||||++ .++.+++++.++|++|.+ .|+.|+|+|||+...+...+..+. ..++|+.||++|+.+++.
T Consensus 3 ~~kli~~DlDGTLl~---~~~~~~~~~~~ai~~l~~-~Gi~~~iaTgR~~~~~~~~~~~l~l~~~~i~~nGa~i~~~~~~ 78 (273)
T PRK00192 3 MKLLVFTDLDGTLLD---HHTYSYEPAKPALKALKE-KGIPVIPCTSKTAAEVEVLRKELGLEDPFIVENGAAIYIPKNY 78 (273)
T ss_pred cceEEEEcCcccCcC---CCCcCcHHHHHHHHHHHH-CCCEEEEEcCCCHHHHHHHHHHcCCCCCEEEEcCcEEEecccc
Confidence 478999999999998 566788999999999976 699999999999999998888763 457999999999875431
Q ss_pred -------------eEEEcCCcCCccHHHHHHHHHHHHhccCCCeeE-eec----cc----eEEE---e-ecc--CCCccc
Q 044635 651 -------------EWETCIPVADCGWKQIAEPVMKLYTETTDGSTI-EDK----ET----ALVW---S-YED--ADPDFG 702 (831)
Q Consensus 651 -------------~w~~~~~~~~~~w~~~v~~il~~~~e~~~gs~i-e~k----~~----~l~~---~-~~~--~d~~~~ 702 (831)
.|..... .+ .+.+.++++.+.+.....+. ... +. .+.. . ... ...-+.
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~---~~-~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (273)
T PRK00192 79 FPFQPDGERLKGDYWVIELG---PP-YEELREILDEISDELGYPLKGFGDLSAEEVAELTGLSGESARLAKDREFSEPFL 154 (273)
T ss_pred cccCCccccccCCceEEEcC---CC-HHHHHHHHHHHHHHhCCCeeehhhCCHHHHHHHhCcCHHHHHHHHhcccCCcee
Confidence 2322111 12 24455555433221110000 000 00 0000 0 000 000000
Q ss_pred hHHHHHHHHHHHhHhcCCCeEEEEcCeEEEEEeCCCCHHHHHHHHHHHhhhcCCCc-ccEEEEcCCchhHHHHHHcchhc
Q 044635 703 SCQAKELLDHLESVLANEPVTVKSGQNLVEVKPQGVNKGLVAKRLLSTMQEREMLP-DFVLCVGDDRSDEDMFEVIISSM 781 (831)
Q Consensus 703 ~~~a~el~~~L~~~l~~~~v~v~~g~~~vEV~p~gvnKG~al~~Ll~~l~~~g~~~-d~vla~GD~~NDe~Mf~~a~~~~ 781 (831)
.....+..+.+...+...++.+..++.++||+|++ +||.|++++++++ |+++ +++++|||+.||++||+.++.
T Consensus 155 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ei~~~~-~Kg~al~~l~~~~---~i~~~~~v~~~GDs~NDi~m~~~ag~-- 228 (273)
T PRK00192 155 WNGSEAAKERFEEALKRLGLKVTRGGRFLHLLGGG-DKGKAVRWLKELY---RRQDGVETIALGDSPNDLPMLEAADI-- 228 (273)
T ss_pred ecCchHHHHHHHHHHHHcCCEEEECCeEEEEeCCC-CHHHHHHHHHHHH---hccCCceEEEEcCChhhHHHHHhCCe--
Confidence 00011223334443433455666678899999999 9999999999998 9999 999999999999999999984
Q ss_pred CCCCCCCCCceEEEEeCCCC--------ccc-ceEe----CChhHHHHHHHHHH
Q 044635 782 AGPSIAPRAEVFACTVGRKP--------SKA-KYYL----DDTVEIVRLMQGLA 822 (831)
Q Consensus 782 ~~~~~~~~~~~~~v~vG~~~--------s~A-~y~l----~d~~eV~~~L~~L~ 822 (831)
+|+|||++ ..| +++. ++.++|++.|+++.
T Consensus 229 ------------~vam~NA~~~~k~~~~~~a~~~v~~~~~~~~~Gv~~~l~~~~ 270 (273)
T PRK00192 229 ------------AVVVPGPDGPNPPLLPGIADGEFILASAPGPEGWAEAINKLL 270 (273)
T ss_pred ------------eEEeCCCCCCCcccCccccCCceEEecCCCcHHHHHHHHHHH
Confidence 67777753 233 3544 35789999999874
No 38
>cd03792 GT1_Trehalose_phosphorylase Trehalose phosphorylase (TP) reversibly catalyzes trehalose synthesis and degradation from alpha-glucose-1-phosphate (alpha-Glc-1-P) and glucose. The catalyzing activity includes the phosphorolysis of trehalose, which produce alpha-Glc-1-P and glucose, and the subsequent synthesis of trehalose. This family is most closely related to the GT1 family of glycosyltransferases.
Probab=99.87 E-value=8.1e-21 Score=213.24 Aligned_cols=299 Identities=16% Similarity=0.159 Sum_probs=200.9
Q ss_pred hhhHHHHHHHHHHHHHHHHHHcCCCCCEEEEeCccccchHHHHHhhcCCCeEEEEEeccCCChHHhhcCCChHHHHHHHh
Q 044635 177 RSLWQAYVSVNKIFADRIMEVINPEDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYKTLPIREEILRALL 256 (831)
Q Consensus 177 ~~~w~~Y~~vN~~fa~~i~~~~~~~~d~vwvhDyhL~llp~~lr~~~~~~~i~~flH~PfP~~e~f~~lp~r~eil~~ll 256 (831)
...+..|...++.++.++....+ .|+|++|+++.+.++...+. .++|+.+++|+++.... . .....+.+.+.
T Consensus 63 ~~~~~~~~~~~~~~~~~~~~~~~--~Dvv~~h~~~~~~~~~~~~~--~~~~~i~~~H~~~~~~~--~--~~~~~~~~~~~ 134 (372)
T cd03792 63 EEEKEIYLEWNEENAERPLLDLD--ADVVVIHDPQPLALPLFKKK--RGRPWIWRCHIDLSSPN--R--RVWDFLQPYIE 134 (372)
T ss_pred HHHHHHHHHHHHHHhccccccCC--CCEEEECCCCchhHHHhhhc--CCCeEEEEeeeecCCCc--H--HHHHHHHHHHH
Confidence 44678888888888776433333 49999999998877766543 36789999999886431 0 01123334445
Q ss_pred cCCeEeecCHHhHHHHHHHHHHHhCCeecccCceeeEEEcCEEEEEEEeecccChHHHHHhhCCcchHHHHHHHHHHhc-
Q 044635 257 NSDLIGFHTFDYARHFLSCCSRMLGLTYESKRGYIGLEYYGRTVSIKILPVGIHMGQLQSVLSLPGTEAKVSELIKQFH- 335 (831)
Q Consensus 257 ~~dligf~t~~~~~~Fl~~~~r~l~~~~~~~~~~~~~~~~gr~~~i~v~P~GId~~~~~~~~~~~~~~~~~~~lr~~~~- 335 (831)
.+|.+.+.+.++++.++ ..+ ++ ++|+|||+...... +........++++++
T Consensus 135 ~~d~~i~~~~~~~~~~~----------------------~~~--~~-vipngvd~~~~~~~---~~~~~~~~~~~~~~~~ 186 (372)
T cd03792 135 DYDAAVFHLPEYVPPQV----------------------PPR--KV-IIPPSIDPLSGKNR---ELSPADIEYILEKYGI 186 (372)
T ss_pred hCCEEeecHHHhcCCCC----------------------CCc--eE-EeCCCCCCCccccC---CCCHHHHHHHHHHhCC
Confidence 67877776633221110 112 23 89999997532111 111233456677787
Q ss_pred cCCcEEEEeccCcccccCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhccCCCCCCc
Q 044635 336 DQGKVMLLGVDDMDIFKGISLKLLAMEQLLIQHPEWQGKVVLVQIANPARGRGKDVKEVQAETYSTVERINQTFGKPGYD 415 (831)
Q Consensus 336 ~~~~~iil~VdRld~~KGi~~~l~A~~~lL~~~P~~~~~vvLvqig~p~r~~~~~~~~l~~~i~~lv~~IN~~~g~~~~~ 415 (831)
..++++|+++||+++.||++.+++||..+.+++|+++ |+++|..... .++..++.++ +.++.+ .. .
T Consensus 187 ~~~~~~i~~vgrl~~~Kg~~~ll~a~~~l~~~~~~~~----l~i~G~g~~~-~~~~~~~~~~---~~~~~~----~~--~ 252 (372)
T cd03792 187 DPERPYITQVSRFDPWKDPFGVIDAYRKVKERVPDPQ----LVLVGSGATD-DPEGWIVYEE---VLEYAE----GD--P 252 (372)
T ss_pred CCCCcEEEEEeccccccCcHHHHHHHHHHHhhCCCCE----EEEEeCCCCC-CchhHHHHHH---HHHHhC----CC--C
Confidence 5688999999999999999999999999988888766 9999964321 1222232222 222211 11 1
Q ss_pred cEEEecCC-CCHHHHHHHHHHcCEeEECCCccCCCC---CCCC-CceEEEeccccccccc---CCCceeCCCCHHHHHHH
Q 044635 416 PVVLIDEP-LKFYERIAYYVVAECCLVTAVRDGSEP---SSPK-KSMLVVSEFIGCSPSL---SGAIRVNPWNIDAVSDA 487 (831)
Q Consensus 416 pv~~~~~~-v~~~el~aly~~ADv~vvtS~~eGma~---~~~~-~g~lVlSe~~G~~~~l---~~allVnP~d~~~~A~a 487 (831)
.|+++... ++.+++.++|++||+|++||.+|||.. +++. +.|+|+|...|..+.+ .+|+++++ .+++|++
T Consensus 253 ~v~~~~~~~~~~~~~~~~~~~ad~~v~~s~~Eg~g~~~lEA~a~G~Pvv~s~~~~~~~~i~~~~~g~~~~~--~~~~a~~ 330 (372)
T cd03792 253 DIHVLTLPPVSDLEVNALQRASTVVLQKSIREGFGLTVTEALWKGKPVIAGPVGGIPLQIEDGETGFLVDT--VEEAAVR 330 (372)
T ss_pred CeEEEecCCCCHHHHHHHHHhCeEEEeCCCccCCCHHHHHHHHcCCCEEEcCCCCchhhcccCCceEEeCC--cHHHHHH
Confidence 36665543 489999999999999999999999821 2222 4578888888877777 35777764 6789999
Q ss_pred HHHHhcCCHHHHHHHHHHHhhhh-ccCCHHHHHHHHHHHHHH
Q 044635 488 MDSALEMADQEKQLRHEKHYRYV-STHDVGYWARSFLQDLER 528 (831)
Q Consensus 488 i~~aL~m~~~er~~r~~~~~~~v-~~~~~~~W~~~~l~~l~~ 528 (831)
|.+++++ +++++...+..++++ ..+++...++++++.+++
T Consensus 331 i~~ll~~-~~~~~~~~~~a~~~~~~~~s~~~~~~~~~~~~~~ 371 (372)
T cd03792 331 ILYLLRD-PELRRKMGANAREHVRENFLITRHLKDYLYLISK 371 (372)
T ss_pred HHHHHcC-HHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHh
Confidence 9999975 455556666677776 578999999888876654
No 39
>TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein. This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate.
Probab=99.86 E-value=3.3e-21 Score=200.65 Aligned_cols=196 Identities=19% Similarity=0.122 Sum_probs=125.4
Q ss_pred eEEecCCCccCCCCCCCCCCCHHHHHHHHHHhhcCCCeEEEECCCCHhhHHHHhCCCC-C-ceEEecCCEEEEeCCCce-
Q 044635 575 AILLDYDGTLMPQASIDKSPNSKTIDILNSLCRDKNNMVFLVSAKSRKTLAEWFSPCE-N-LGIAAEHGYFFRLRRDEE- 651 (831)
Q Consensus 575 li~~D~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~~~-~-~~liaenGa~i~~~~~~~- 651 (831)
+|++|+||||++ .++.++++++++|++|.+ +|+.|+++|||+...+..++..+. . .++||+||+.|+......
T Consensus 1 ~i~~DlDGTLL~---~~~~~~~~~~~~l~~l~~-~gi~~~i~TgR~~~~~~~~~~~l~~~~~~~I~~NGa~i~~~~~~~~ 76 (221)
T TIGR02463 1 WVFSDLDGTLLD---SHSYDWQPAAPWLTRLQE-AGIPVILCTSKTAAEVEYLQKALGLTGDPYIAENGAAIHLEELWRE 76 (221)
T ss_pred CEEEeCCCCCcC---CCCCCcHHHHHHHHHHHH-CCCeEEEEcCCCHHHHHHHHHHcCCCCCcEEEeCCcEEEcCccccc
Confidence 589999999998 555566669999999976 699999999999999999988763 3 579999999998753321
Q ss_pred E---EEcCCcCCccHHHHHHHHHHHHhccCCCee-Eeecc--------ceEEE------eeccCCCccchHHHHHHHHHH
Q 044635 652 W---ETCIPVADCGWKQIAEPVMKLYTETTDGST-IEDKE--------TALVW------SYEDADPDFGSCQAKELLDHL 713 (831)
Q Consensus 652 w---~~~~~~~~~~w~~~v~~il~~~~e~~~gs~-ie~k~--------~~l~~------~~~~~d~~~~~~~a~el~~~L 713 (831)
+ ..... ...| +.+.++++...+.....+ ..... ..+.. ..+....-+......+..+.+
T Consensus 77 ~~~~~~~~~--~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (221)
T TIGR02463 77 EPGYPRIIL--GISY-GIIRLVLETLSEELHFKFTPFDDLSDAEIAELTGLSGSQAALAQDREASVPLLWRDSDSRMPRF 153 (221)
T ss_pred CCCceEEec--CCCH-HHHHHHHHHHHHHhCCCceehhhCCHHHHHHHhCcCHHHHHHHHhccCCccEEecCchhHHHHH
Confidence 1 00101 1122 335555543322100000 00000 00000 000000000000001222333
Q ss_pred HhHhcCCCeEEEEcCeEEEEEeCCCCHHHHHHHHHHHhhhcCCCcccEEEEcCCchhHHHHHHcchh
Q 044635 714 ESVLANEPVTVKSGQNLVEVKPQGVNKGLVAKRLLSTMQEREMLPDFVLCVGDDRSDEDMFEVIISS 780 (831)
Q Consensus 714 ~~~l~~~~v~v~~g~~~vEV~p~gvnKG~al~~Ll~~l~~~g~~~d~vla~GD~~NDe~Mf~~a~~~ 780 (831)
.+.+...++.+.++..++||+|++++||.|++++++++ |++++++++|||+.||++||+.++.+
T Consensus 154 ~~~l~~~~~~~~~~~~~~ei~~~~~~Kg~al~~l~~~l---gi~~~~vi~~GD~~NDi~ml~~ag~~ 217 (221)
T TIGR02463 154 TALLADLGLAIVQGNRFSHVLGASSSKGKAANWLKATY---NQPDVKTLGLGDGPNDLPLLEVADYA 217 (221)
T ss_pred HHHHHHcCCeEEecCCeeEEecCCCCHHHHHHHHHHHh---CCCCCcEEEECCCHHHHHHHHhCCce
Confidence 33333334555667789999999999999999999998 99999999999999999999999864
No 40
>PRK15484 lipopolysaccharide 1,2-N-acetylglucosaminetransferase; Provisional
Probab=99.86 E-value=1.4e-19 Score=203.89 Aligned_cols=267 Identities=18% Similarity=0.226 Sum_probs=189.0
Q ss_pred CCEEEEeCccccchHHHHHhhcCCCeEEEEEeccCCChHHhhcCCChHHHHHHHhcCCeEeecCHHhHHHHHHHHHHHhC
Q 044635 202 DDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYKTLPIREEILRALLNSDLIGFHTFDYARHFLSCCSRMLG 281 (831)
Q Consensus 202 ~d~vwvhDyhL~llp~~lr~~~~~~~i~~flH~PfP~~e~f~~lp~r~eil~~ll~~dligf~t~~~~~~Fl~~~~r~l~ 281 (831)
+|+|+||+.. .+-..++++.|++++.+.+|..|. ++.++ .++.|.+.+.. .+.++.. .+
T Consensus 100 ~~vi~v~~~~--~~~~~~~~~~~~~~~v~~~h~~~~-~~~~~-------------~~~~ii~~S~~-~~~~~~~---~~- 158 (380)
T PRK15484 100 DSVIVIHNSM--KLYRQIRERAPQAKLVMHMHNAFE-PELLD-------------KNAKIIVPSQF-LKKFYEE---RL- 158 (380)
T ss_pred CcEEEEeCcH--HhHHHHHhhCCCCCEEEEEecccC-hhHhc-------------cCCEEEEcCHH-HHHHHHh---hC-
Confidence 5999999743 444667888999999999997762 22221 36777776643 3333321 00
Q ss_pred CeecccCceeeEEEcCEEEEEEEeecccChHHHHHhhCCcchHHHHHHHHHHhc-cCCcEEEEeccCcccccCHHHHHHH
Q 044635 282 LTYESKRGYIGLEYYGRTVSIKILPVGIHMGQLQSVLSLPGTEAKVSELIKQFH-DQGKVMLLGVDDMDIFKGISLKLLA 360 (831)
Q Consensus 282 ~~~~~~~~~~~~~~~gr~~~i~v~P~GId~~~~~~~~~~~~~~~~~~~lr~~~~-~~~~~iil~VdRld~~KGi~~~l~A 360 (831)
...++.++|+|||...|.+. . ...++++++ ..++++|+++||+.+.||+..+++|
T Consensus 159 ----------------~~~~i~vIpngvd~~~~~~~-----~---~~~~~~~~~~~~~~~~il~~Grl~~~Kg~~~Li~A 214 (380)
T PRK15484 159 ----------------PNADISIVPNGFCLETYQSN-----P---QPNLRQQLNISPDETVLLYAGRISPDKGILLLMQA 214 (380)
T ss_pred ----------------CCCCEEEecCCCCHHHcCCc-----c---hHHHHHHhCCCCCCeEEEEeccCccccCHHHHHHH
Confidence 11246789999998877421 1 124456665 4578999999999999999999999
Q ss_pred HHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhccCCCCCCccEEEecCCCCHHHHHHHHHHcCEeE
Q 044635 361 MEQLLIQHPEWQGKVVLVQIANPARGRGKDVKEVQAETYSTVERINQTFGKPGYDPVVLIDEPLKFYERIAYYVVAECCL 440 (831)
Q Consensus 361 ~~~lL~~~P~~~~~vvLvqig~p~r~~~~~~~~l~~~i~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv~v 440 (831)
+.++.+++|+++ |+++|.+......+..++++++.+++.+.+. .++ +.+.++.+++..+|+.||++|
T Consensus 215 ~~~l~~~~p~~~----lvivG~g~~~~~~~~~~~~~~l~~~~~~l~~--------~v~-~~G~~~~~~l~~~~~~aDv~v 281 (380)
T PRK15484 215 FEKLATAHSNLK----LVVVGDPTASSKGEKAAYQKKVLEAAKRIGD--------RCI-MLGGQPPEKMHNYYPLADLVV 281 (380)
T ss_pred HHHHHHhCCCeE----EEEEeCCccccccchhHHHHHHHHHHHhcCC--------cEE-EeCCCCHHHHHHHHHhCCEEE
Confidence 999999999876 9999965432222334567777777766431 244 567889999999999999999
Q ss_pred ECCCc-cCCCC---CCCC-CceEEEeccccccccc---CCCc-eeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHhhh-h
Q 044635 441 VTAVR-DGSEP---SSPK-KSMLVVSEFIGCSPSL---SGAI-RVNPWNIDAVSDAMDSALEMADQEKQLRHEKHYRY-V 510 (831)
Q Consensus 441 vtS~~-eGma~---~~~~-~g~lVlSe~~G~~~~l---~~al-lVnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~-v 510 (831)
+||.. |||.. +++. +.|+|+|..+|..+.+ .+|+ +++|.|++++|++|.+++++++ +....++.+++ .
T Consensus 282 ~pS~~~E~f~~~~lEAma~G~PVI~s~~gg~~Eiv~~~~~G~~l~~~~d~~~la~~I~~ll~d~~--~~~~~~~ar~~~~ 359 (380)
T PRK15484 282 VPSQVEEAFCMVAVEAMAAGKPVLASTKGGITEFVLEGITGYHLAEPMTSDSIISDINRTLADPE--LTQIAEQAKDFVF 359 (380)
T ss_pred eCCCCccccccHHHHHHHcCCCEEEeCCCCcHhhcccCCceEEEeCCCCHHHHHHHHHHHHcCHH--HHHHHHHHHHHHH
Confidence 99974 88721 3333 4467777776666655 2465 6789999999999999998764 33445566655 4
Q ss_pred ccCCHHHHHHHHHHHHHH
Q 044635 511 STHDVGYWARSFLQDLER 528 (831)
Q Consensus 511 ~~~~~~~W~~~~l~~l~~ 528 (831)
.++++..-++++++.++.
T Consensus 360 ~~fsw~~~a~~~~~~l~~ 377 (380)
T PRK15484 360 SKYSWEGVTQRFEEQIHN 377 (380)
T ss_pred HhCCHHHHHHHHHHHHHH
Confidence 678888888888887764
No 41
>PLN02382 probable sucrose-phosphatase
Probab=99.86 E-value=5.2e-21 Score=215.64 Aligned_cols=230 Identities=17% Similarity=0.233 Sum_probs=149.5
Q ss_pred HhcCceeEEecCCCccCCCCCCCCCCCHHHHHHH-HHHhhcCCCeEEEECCCCHhhHHHHhCCC---CCceEEecCCEEE
Q 044635 569 KRTTTRAILLDYDGTLMPQASIDKSPNSKTIDIL-NSLCRDKNNMVFLVSAKSRKTLAEWFSPC---ENLGIAAEHGYFF 644 (831)
Q Consensus 569 ~~s~~rli~~D~DGTLl~~~~~~~~~s~~~~~~L-~~L~~d~g~~V~I~SGR~~~~l~~~~~~~---~~~~liaenGa~i 644 (831)
..+.+.+|++|+||||++.. .++..+.....++ +++.+ +|..++++|||+...+.++.+.+ .+..+|+.||+.|
T Consensus 5 ~~~~~~lI~sDLDGTLL~~~-~~~~~s~~~~~~l~~~~~~-~gi~fv~aTGR~~~~~~~l~~~~~l~~p~~~I~~nGt~I 82 (413)
T PLN02382 5 SGSPRLMIVSDLDHTMVDHH-DPENLSLLRFNALWEAEYR-HDSLLVFSTGRSPTLYKELRKEKPLLTPDITIMSVGTEI 82 (413)
T ss_pred cCCCCEEEEEcCCCcCcCCC-CccchhHHHHHHHHHHhhc-CCeeEEEEcCCCHHHHHHHHHhCCCCCCCEEEEcCCcEE
Confidence 34567899999999999832 1346675555555 77765 69999999999988777776544 2345788899999
Q ss_pred EeCCCc----eEEEcCCcCCccHHH-HHHHHHHHHhccCCCeeEeeccceEEEeeccCCCccchHHHHHHHHHHHhHhcC
Q 044635 645 RLRRDE----EWETCIPVADCGWKQ-IAEPVMKLYTETTDGSTIEDKETALVWSYEDADPDFGSCQAKELLDHLESVLAN 719 (831)
Q Consensus 645 ~~~~~~----~w~~~~~~~~~~w~~-~v~~il~~~~e~~~gs~ie~k~~~l~~~~~~~d~~~~~~~a~el~~~L~~~l~~ 719 (831)
+..+.. .|.... +..|.. .+.+.+..|.........+.+...+.+.+.+. .+.++...+.+.+..
T Consensus 83 ~~~~~~~~d~~w~~~l---~~~w~~~~v~~~~~~~~~l~~q~~~~~~~~Ki~~~~~~~-------~~~~~~~~l~~~~~~ 152 (413)
T PLN02382 83 AYGESMVPDHGWVEYL---NKKWDREIVVEETSKFPELKLQPETEQRPHKVSFYVDKK-------KAQEVIKELSERLEK 152 (413)
T ss_pred EeCCCCccChhHHHHH---hccCChhhHHHHHhcCCCcccCCcccCCCeEEEEEechH-------HhHHHHHHHHHHHHh
Confidence 865321 121111 123322 12222222211111222233334444443321 233445555554432
Q ss_pred C--Ce-EEEEcCeEEEEEeCCCCHHHHHHHHHHHhhhcCCCcccEEEEcCCchhHHHHHHcchhcCCCCCCCCCceEEEE
Q 044635 720 E--PV-TVKSGQNLVEVKPQGVNKGLVAKRLLSTMQEREMLPDFVLCVGDDRSDEDMFEVIISSMAGPSIAPRAEVFACT 796 (831)
Q Consensus 720 ~--~v-~v~~g~~~vEV~p~gvnKG~al~~Ll~~l~~~g~~~d~vla~GD~~NDe~Mf~~a~~~~~~~~~~~~~~~~~v~ 796 (831)
. .+ .+.++..++||+|+++|||.|+++|++++...|++++++++|||+.||++||+.++. ++|+
T Consensus 153 ~g~~~~i~~s~~~~ldI~p~g~sKg~Al~~L~~~~~~~gi~~~~~iafGDs~NDleMl~~ag~-------------~gva 219 (413)
T PLN02382 153 RGLDVKIIYSGGIDLDVLPQGAGKGQALAYLLKKLKAEGKAPVNTLVCGDSGNDAELFSVPDV-------------YGVM 219 (413)
T ss_pred cCCcEEEEEECCcEEEEEeCCCCHHHHHHHHHHHhhhcCCChhcEEEEeCCHHHHHHHhcCCC-------------CEEE
Confidence 2 23 346788999999999999999999999986668999999999999999999999872 3678
Q ss_pred eCCCC----c--------ccceEe---CChhHHHHHHHHHHh
Q 044635 797 VGRKP----S--------KAKYYL---DDTVEIVRLMQGLAC 823 (831)
Q Consensus 797 vG~~~----s--------~A~y~l---~d~~eV~~~L~~L~~ 823 (831)
|||+. . .|++++ ++.+++.+.|+.+.-
T Consensus 220 m~NA~~elk~~a~~~~~~~~~~~~a~~~~~~GI~~al~~f~l 261 (413)
T PLN02382 220 VSNAQEELLQWYAENAKDNPKIIHATERCAAGIIQAIGHFNL 261 (413)
T ss_pred EcCCcHHHHHHHHhhccCCCcEEEcCCCCccHHHHHHHHhCC
Confidence 88762 1 235553 358999999998763
No 42
>PLN02423 phosphomannomutase
Probab=99.85 E-value=7.6e-20 Score=193.04 Aligned_cols=211 Identities=18% Similarity=0.156 Sum_probs=138.6
Q ss_pred CceeEEecCCCccCCCCCCCCCCCHHHHHHHHHHhhcCCCeEEEECCCCHhhHHHHhCCC-CC--ceEEecCCEEEEeCC
Q 044635 572 TTRAILLDYDGTLMPQASIDKSPNSKTIDILNSLCRDKNNMVFLVSAKSRKTLAEWFSPC-EN--LGIAAEHGYFFRLRR 648 (831)
Q Consensus 572 ~~rli~~D~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~~-~~--~~liaenGa~i~~~~ 648 (831)
.++++++|+||||++ .++.+++++.++|++|.+ ++.|+++|||+...+.+.+... .. .++|++||+++...+
T Consensus 6 ~~~i~~~D~DGTLl~---~~~~i~~~~~~ai~~l~~--~i~fviaTGR~~~~~~~~~~~~~~~~~~~~I~~NGa~i~~~g 80 (245)
T PLN02423 6 PGVIALFDVDGTLTA---PRKEATPEMLEFMKELRK--VVTVGVVGGSDLSKISEQLGKTVINDYDYVFSENGLVAHKDG 80 (245)
T ss_pred cceEEEEeccCCCcC---CCCcCCHHHHHHHHHHHh--CCEEEEECCcCHHHHHHHhcccccccCCEEEECCceEEEeCC
Confidence 455777999999998 778899999999999985 4999999999999998888764 21 478999999998544
Q ss_pred CceEEEcCCc-CCccHHHHHHHHHHHHhc--------cCCCeeEeeccceEEEe--eccCCCc---------cchHHHHH
Q 044635 649 DEEWETCIPV-ADCGWKQIAEPVMKLYTE--------TTDGSTIEDKETALVWS--YEDADPD---------FGSCQAKE 708 (831)
Q Consensus 649 ~~~w~~~~~~-~~~~w~~~v~~il~~~~e--------~~~gs~ie~k~~~l~~~--~~~~d~~---------~~~~~a~e 708 (831)
...+...+.. .+ .+.+.++++...+ ...+.+++..+...... +.++... .......+
T Consensus 81 ~~i~~~~l~~~l~---~~~~~~ii~~~~~~~~~~~i~~~~~~~ie~~~~i~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~ 157 (245)
T PLN02423 81 KLIGTQSLKSFLG---EDKLKEFINFTLHYIADLDIPIKRGTFIEFRSGMLNVSPIGRNCSQEERDEFEKYDKVHNIRPK 157 (245)
T ss_pred EEEEEecccccCC---HHHHHHHHHHHHHHHHHcCCccccCCeEEccCCccccCcccccCCHhHHhhHHhhCccchHHHH
Confidence 3222221111 11 1334444433221 12244555433222111 1111000 01122344
Q ss_pred HHHHHHhHhcCCCeE-EEEcCeEEEEEeCCCCHHHHHHHHHHHhhhcCCCcccEEEEcC----CchhHHHHHHcchhcCC
Q 044635 709 LLDHLESVLANEPVT-VKSGQNLVEVKPQGVNKGLVAKRLLSTMQEREMLPDFVLCVGD----DRSDEDMFEVIISSMAG 783 (831)
Q Consensus 709 l~~~L~~~l~~~~v~-v~~g~~~vEV~p~gvnKG~al~~Ll~~l~~~g~~~d~vla~GD----~~NDe~Mf~~a~~~~~~ 783 (831)
+...+.+.+.+..+. ..+|..++||+|+|+|||.|++.|+ +++++++||| +.||++||+.-+-
T Consensus 158 ~~~~l~~~~~~~~~~~s~~g~~~iDi~~~gvnKg~al~~L~--------~~~e~~aFGD~~~~~~ND~eMl~~~~~---- 225 (245)
T PLN02423 158 MVSVLREKFAHLNLTYSIGGQISFDVFPQGWDKTYCLQFLE--------DFDEIHFFGDKTYEGGNDHEIFESERT---- 225 (245)
T ss_pred HHHHHHHhCCCCcEEEecCCcEEEEEeeCCCCHHHHHHHhc--------CcCeEEEEeccCCCCCCcHHHHhCCCc----
Confidence 555565655442333 3345689999999999999999997 5799999999 8999999997542
Q ss_pred CCCCCCCceEEEEeCCCCcccceEeCChhHHHHHHHHHH
Q 044635 784 PSIAPRAEVFACTVGRKPSKAKYYLDDTVEIVRLMQGLA 822 (831)
Q Consensus 784 ~~~~~~~~~~~v~vG~~~s~A~y~l~d~~eV~~~L~~L~ 822 (831)
.+.+ +.++++..++|++|.
T Consensus 226 ---------~~~~-----------~~~~~~~~~~~~~~~ 244 (245)
T PLN02423 226 ---------IGHT-----------VTSPDDTREQCTALF 244 (245)
T ss_pred ---------ceEE-----------eCCHHHHHHHHHHhc
Confidence 3444 378999999888763
No 43
>PLN02939 transferase, transferring glycosyl groups
Probab=99.85 E-value=5.6e-19 Score=209.83 Aligned_cols=316 Identities=14% Similarity=0.146 Sum_probs=207.7
Q ss_pred HHHHHHHHHHHHHHHHHH-cCCCCCEEEEeCccccchHHHHHhh-----cCCCeEEEEEecc-----CCChHHhhc--CC
Q 044635 180 WQAYVSVNKIFADRIMEV-INPEDDFVWVHDYHLMVLPTFLRKR-----FNRVKLGFFLHSP-----FPSSEIYKT--LP 246 (831)
Q Consensus 180 w~~Y~~vN~~fa~~i~~~-~~~~~d~vwvhDyhL~llp~~lr~~-----~~~~~i~~flH~P-----fP~~e~f~~--lp 246 (831)
...|.-+.+..++.+... ..| |+|.+||||-.++|.++.+. +.++++.|++|-= ||... +.. +|
T Consensus 590 ~~RF~~FsrAaLe~~~~~~~~P--DIIH~HDW~TaLV~pll~~~y~~~~~~~~ktVfTIHNl~yQG~f~~~~-l~~lGL~ 666 (977)
T PLN02939 590 FKRFSYFSRAALELLYQSGKKP--DIIHCHDWQTAFVAPLYWDLYAPKGFNSARICFTCHNFEYQGTAPASD-LASCGLD 666 (977)
T ss_pred HHHHHHHHHHHHHHHHhcCCCC--CEEEECCccHHHHHHHHHHHHhhccCCCCcEEEEeCCCcCCCcCCHHH-HHHcCCC
Confidence 344555555555544432 344 89999999999985554432 4568999999953 33211 111 22
Q ss_pred C---------------hHHH-HHHHhcCCeEeecCHHhHHHHHHHHHHHhCCeecccCceeeEEEcCEEEEEEEeecccC
Q 044635 247 I---------------REEI-LRALLNSDLIGFHTFDYARHFLSCCSRMLGLTYESKRGYIGLEYYGRTVSIKILPVGIH 310 (831)
Q Consensus 247 ~---------------r~ei-l~~ll~~dligf~t~~~~~~Fl~~~~r~l~~~~~~~~~~~~~~~~gr~~~i~v~P~GId 310 (831)
+ +-.+ --|+..||.|..-++.|++.-+. ..--|++. .+..+..++.++|+|||
T Consensus 667 ~~~l~~~d~le~~~~~~iN~LK~GIv~AD~VtTVSptYA~EI~t--e~G~GL~~---------~L~~~~~Kl~gIlNGID 735 (977)
T PLN02939 667 VHQLDRPDRMQDNAHGRINVVKGAIVYSNIVTTVSPTYAQEVRS--EGGRGLQD---------TLKFHSKKFVGILNGID 735 (977)
T ss_pred HHHccChhhhhhccCCchHHHHHHHHhCCeeEeeeHHHHHHHHH--HhccchHH---------HhccccCCceEEeccee
Confidence 1 1112 24677799999889999887654 10001110 12234567889999999
Q ss_pred hHHHHHhhCC-------c----chHHHHHHHHHHhc-c---CCcEEEEeccCcccccCHHHHHHHHHHHHHhCCCCCCcE
Q 044635 311 MGQLQSVLSL-------P----GTEAKVSELIKQFH-D---QGKVMLLGVDDMDIFKGISLKLLAMEQLLIQHPEWQGKV 375 (831)
Q Consensus 311 ~~~~~~~~~~-------~----~~~~~~~~lr~~~~-~---~~~~iil~VdRld~~KGi~~~l~A~~~lL~~~P~~~~~v 375 (831)
.+.|.+.... . .-......+++++| + .+.++|++|||+++.||+..+++|+.++++ ++ +
T Consensus 736 ~e~wnPatD~~L~~~Ys~~dl~GK~~nK~aLRkelGL~~~d~d~pLIg~VGRL~~QKGiDlLleA~~~Ll~--~d----v 809 (977)
T PLN02939 736 TDTWNPSTDRFLKVQYNANDLQGKAANKAALRKQLGLSSADASQPLVGCITRLVPQKGVHLIRHAIYKTAE--LG----G 809 (977)
T ss_pred hhhcCCccccccccccChhhhhhhhhhhHHHHHHhCCCcccccceEEEEeecCCcccChHHHHHHHHHHhh--cC----C
Confidence 9988643210 0 00123457888997 4 256899999999999999999999998875 33 3
Q ss_pred EEEEEecCCCCCchhHHHHHHHHHHHHHHHhccCCCCCCccEEEecCCCCHHHHHHHHHHcCEeEECCCccCCCC---CC
Q 044635 376 VLVQIANPARGRGKDVKEVQAETYSTVERINQTFGKPGYDPVVLIDEPLKFYERIAYYVVAECCLVTAVRDGSEP---SS 452 (831)
Q Consensus 376 vLvqig~p~r~~~~~~~~l~~~i~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv~vvtS~~eGma~---~~ 452 (831)
.||++|. |++ ..+++++..++.+.+. .+ .|.+ .+.++......+|++||+||+||.+|||.. ++
T Consensus 810 qLVIvGd-----Gp~-~~~e~eL~~La~~l~l----~d--rV~F-lG~~de~lah~IYAaADIFLmPSr~EPfGLvqLEA 876 (977)
T PLN02939 810 QFVLLGS-----SPV-PHIQREFEGIADQFQS----NN--NIRL-ILKYDEALSHSIYAASDMFIIPSMFEPCGLTQMIA 876 (977)
T ss_pred EEEEEeC-----CCc-HHHHHHHHHHHHHcCC----CC--eEEE-EeccCHHHHHHHHHhCCEEEECCCccCCcHHHHHH
Confidence 4888883 322 2345666777666432 11 2444 456777777899999999999999998832 33
Q ss_pred CCCc-eEEEeccccccccc------------CCCceeCCCCHHHHHHHHHHHhc---CCHHHHHHHHHHHhhhhccCCHH
Q 044635 453 PKKS-MLVVSEFIGCSPSL------------SGAIRVNPWNIDAVSDAMDSALE---MADQEKQLRHEKHYRYVSTHDVG 516 (831)
Q Consensus 453 ~~~g-~lVlSe~~G~~~~l------------~~allVnP~d~~~~A~ai~~aL~---m~~~er~~r~~~~~~~v~~~~~~ 516 (831)
+..| |+|++..+|..+.+ .+|++|+|.|+++++++|.+++. ..++.++...++. ....+++.
T Consensus 877 MAyGtPPVVs~vGGL~DtV~d~d~e~i~~eg~NGfLf~~~D~eaLa~AL~rAL~~~~~dpe~~~~L~~~a--m~~dFSWe 954 (977)
T PLN02939 877 MRYGSVPIVRKTGGLNDSVFDFDDETIPVELRNGFTFLTPDEQGLNSALERAFNYYKRKPEVWKQLVQKD--MNIDFSWD 954 (977)
T ss_pred HHCCCCEEEecCCCCcceeecCCccccccCCCceEEecCCCHHHHHHHHHHHHHHhccCHHHHHHHHHHH--HHhcCCHH
Confidence 3344 88999988887655 25899999999999999999986 2333333322222 23678889
Q ss_pred HHHHHHHHHHHHHH
Q 044635 517 YWARSFLQDLERTC 530 (831)
Q Consensus 517 ~W~~~~l~~l~~~~ 530 (831)
..++.+++-..++.
T Consensus 955 ~~A~qYeeLY~~ll 968 (977)
T PLN02939 955 SSASQYEELYQRAV 968 (977)
T ss_pred HHHHHHHHHHHHHH
Confidence 88988876666554
No 44
>PLN02316 synthase/transferase
Probab=99.84 E-value=2.7e-19 Score=216.27 Aligned_cols=307 Identities=12% Similarity=0.113 Sum_probs=210.8
Q ss_pred hhHHHHHHHHHHHHHHHHHH-cCCCCCEEEEeCccccchHHHHHhh-----cCCCeEEEEEeccCCChHHhhcCCChHHH
Q 044635 178 SLWQAYVSVNKIFADRIMEV-INPEDDFVWVHDYHLMVLPTFLRKR-----FNRVKLGFFLHSPFPSSEIYKTLPIREEI 251 (831)
Q Consensus 178 ~~w~~Y~~vN~~fa~~i~~~-~~~~~d~vwvhDyhL~llp~~lr~~-----~~~~~i~~flH~PfP~~e~f~~lp~r~ei 251 (831)
+....|.-+++..++.+.+. +.| |+|.+||+|-.++|.++++. +.++|+.+++|-.- | .+..+
T Consensus 687 Dd~~RF~~F~~Aale~l~~~~~~P--DIIHaHDW~talva~llk~~~~~~~~~~~p~V~TiHnl~-----~----~~n~l 755 (1036)
T PLN02316 687 NDGERFGFFCHAALEFLLQSGFHP--DIIHCHDWSSAPVAWLFKDHYAHYGLSKARVVFTIHNLE-----F----GANHI 755 (1036)
T ss_pred hHHHHHHHHHHHHHHHHHhcCCCC--CEEEECCChHHHHHHHHHHhhhhhccCCCCEEEEeCCcc-----c----chhHH
Confidence 33455666666666655433 234 89999999999999999875 35689999999531 1 11234
Q ss_pred HHHHhcCCeEeecCHHhHHHHHHHHHHHhCCeecccCceeeEEEcCEEEEEEEeecccChHHHHHhhCC--c-----c--
Q 044635 252 LRALLNSDLIGFHTFDYARHFLSCCSRMLGLTYESKRGYIGLEYYGRTVSIKILPVGIHMGQLQSVLSL--P-----G-- 322 (831)
Q Consensus 252 l~~ll~~dligf~t~~~~~~Fl~~~~r~l~~~~~~~~~~~~~~~~gr~~~i~v~P~GId~~~~~~~~~~--~-----~-- 322 (831)
-.++..||.|.--++.|++..+.. + .+ ..+..++.++|+|||++.|.+.... | .
T Consensus 756 k~~l~~AD~ViTVS~tya~EI~~~-----~----------~l--~~~~~Kl~vI~NGID~~~w~P~tD~~lp~~y~~~~~ 818 (1036)
T PLN02316 756 GKAMAYADKATTVSPTYSREVSGN-----S----------AI--APHLYKFHGILNGIDPDIWDPYNDNFIPVPYTSENV 818 (1036)
T ss_pred HHHHHHCCEEEeCCHHHHHHHHhc-----c----------Cc--ccccCCEEEEECCccccccCCcccccccccCCchhh
Confidence 467788999999899888766531 0 00 1124577899999999887543110 0 0
Q ss_pred ---hHHHHHHHHHHhc-c-CCcEEEEeccCcccccCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHH
Q 044635 323 ---TEAKVSELIKQFH-D-QGKVMLLGVDDMDIFKGISLKLLAMEQLLIQHPEWQGKVVLVQIANPARGRGKDVKEVQAE 397 (831)
Q Consensus 323 ---~~~~~~~lr~~~~-~-~~~~iil~VdRld~~KGi~~~l~A~~~lL~~~P~~~~~vvLvqig~p~r~~~~~~~~l~~~ 397 (831)
-......+++++| + .+.++|++||||++.||+..+++|+.++++. + +.||++|. |++ ..++.+
T Consensus 819 ~~gK~~~k~~Lr~~lGL~~~d~plVg~VGRL~~qKGvdlLi~Al~~ll~~--~----~qlVIvG~-----Gpd-~~~e~~ 886 (1036)
T PLN02316 819 VEGKRAAKEALQQRLGLKQADLPLVGIITRLTHQKGIHLIKHAIWRTLER--N----GQVVLLGS-----APD-PRIQND 886 (1036)
T ss_pred hhhhhhhHHHHHHHhCCCcccCeEEEEEeccccccCHHHHHHHHHHHhhc--C----cEEEEEeC-----CCC-HHHHHH
Confidence 0123456888887 4 3678999999999999999999999999863 3 34777883 333 245677
Q ss_pred HHHHHHHHhccCCCCCCccEEEecCCCCHHHHHHHHHHcCEeEECCCccCCC---CCCCCCc-eEEEeccccccccc-C-
Q 044635 398 TYSTVERINQTFGKPGYDPVVLIDEPLKFYERIAYYVVAECCLVTAVRDGSE---PSSPKKS-MLVVSEFIGCSPSL-S- 471 (831)
Q Consensus 398 i~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv~vvtS~~eGma---~~~~~~g-~lVlSe~~G~~~~l-~- 471 (831)
+.+++.++...+.. .|.+.. ..+......+|++||+||+||.+||+. .++++.| |+|++..+|..+.+ .
T Consensus 887 l~~La~~Lg~~~~~----rV~f~g-~~de~lah~iyaaADiflmPS~~EP~GLvqLEAMa~GtppVvs~vGGL~DtV~d~ 961 (1036)
T PLN02316 887 FVNLANQLHSSHHD----RARLCL-TYDEPLSHLIYAGADFILVPSIFEPCGLTQLTAMRYGSIPVVRKTGGLFDTVFDV 961 (1036)
T ss_pred HHHHHHHhCccCCC----eEEEEe-cCCHHHHHHHHHhCcEEEeCCcccCccHHHHHHHHcCCCeEEEcCCCcHhhcccc
Confidence 88888776544321 244433 344444457999999999999999883 2444455 89999988888776 2
Q ss_pred --------------CCceeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHhhhh-ccCCHHHHHHHHHHHHHHH
Q 044635 472 --------------GAIRVNPWNIDAVSDAMDSALEMADQEKQLRHEKHYRYV-STHDVGYWARSFLQDLERT 529 (831)
Q Consensus 472 --------------~allVnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v-~~~~~~~W~~~~l~~l~~~ 529 (831)
+|++|+|.|+++++++|.++|......+....+..++.+ ..+++..-++++++-..++
T Consensus 962 d~~~~~~~~~g~~~tGflf~~~d~~aLa~AL~raL~~~~~~~~~~~~~~r~~m~~dFSW~~~A~~Y~~LY~~a 1034 (1036)
T PLN02316 962 DHDKERAQAQGLEPNGFSFDGADAAGVDYALNRAISAWYDGRDWFNSLCKRVMEQDWSWNRPALDYMELYHSA 1034 (1036)
T ss_pred ccccccccccccCCceEEeCCCCHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHH
Confidence 589999999999999999999864332222233333333 5578888888777665554
No 45
>PRK00654 glgA glycogen synthase; Provisional
Probab=99.84 E-value=3.2e-19 Score=206.34 Aligned_cols=292 Identities=19% Similarity=0.208 Sum_probs=189.5
Q ss_pred CCEEEEeCccccchHHHHHhhc----CCCeEEEEEeccCC----ChHHhhcC--CC-------------hHHHHHHHhcC
Q 044635 202 DDFVWVHDYHLMVLPTFLRKRF----NRVKLGFFLHSPFP----SSEIYKTL--PI-------------REEILRALLNS 258 (831)
Q Consensus 202 ~d~vwvhDyhL~llp~~lr~~~----~~~~i~~flH~PfP----~~e~f~~l--p~-------------r~eil~~ll~~ 258 (831)
-|+|.+||||-.++|.+++++. .++|+.++.|..-. ..+.+..+ |+ ..-+-.++..|
T Consensus 119 pDiiH~h~w~~~~~~~~l~~~~~~~~~~~~~v~TiH~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a 198 (466)
T PRK00654 119 PDIVHAHDWHTGLIPALLKEKYWRGYPDIKTVFTIHNLAYQGLFPAEILGELGLPAEAFHLEGLEFYGQISFLKAGLYYA 198 (466)
T ss_pred CceEEECCcHHHHHHHHHHHhhhccCCCCCEEEEcCCCcCCCcCCHHHHHHcCCChHHcCchhhhcCCcccHHHHHHHhc
Confidence 3999999999999999998663 46899999997521 11111111 11 01122355667
Q ss_pred CeEeecCHHhHHHHHHHHHHHhCCeecccCceeeE--EEcCEEEEEEEeecccChHHHHHhhCC-----------cchHH
Q 044635 259 DLIGFHTFDYARHFLSCCSRMLGLTYESKRGYIGL--EYYGRTVSIKILPVGIHMGQLQSVLSL-----------PGTEA 325 (831)
Q Consensus 259 dligf~t~~~~~~Fl~~~~r~l~~~~~~~~~~~~~--~~~gr~~~i~v~P~GId~~~~~~~~~~-----------~~~~~ 325 (831)
|.|...++.|++..... ..|. ++ .+..+..++.++|+|||.+.|.+.... .....
T Consensus 199 d~vitvS~~~~~ei~~~---~~~~---------gl~~~~~~~~~ki~vI~NGid~~~~~p~~~~~~~~~~~~~~~~~k~~ 266 (466)
T PRK00654 199 DRVTTVSPTYAREITTP---EFGY---------GLEGLLRARSGKLSGILNGIDYDIWNPETDPLLAANYSADDLEGKAE 266 (466)
T ss_pred CcCeeeCHHHHHHhccc---cCCc---------ChHHHHHhcccCceEecCCCCccccCCccCcccccccChhhhhchHH
Confidence 77666666665543210 0000 00 011234478899999999988643110 01122
Q ss_pred HHHHHHHHhc-c-CCcEEEEeccCcccccCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHH
Q 044635 326 KVSELIKQFH-D-QGKVMLLGVDDMDIFKGISLKLLAMEQLLIQHPEWQGKVVLVQIANPARGRGKDVKEVQAETYSTVE 403 (831)
Q Consensus 326 ~~~~lr~~~~-~-~~~~iil~VdRld~~KGi~~~l~A~~~lL~~~P~~~~~vvLvqig~p~r~~~~~~~~l~~~i~~lv~ 403 (831)
..+.++++++ + .+.++|++|||+++.||++.+++|+++++++ + +.|+++|.+ + ..+++++++++.
T Consensus 267 ~k~~l~~~~gl~~~~~~~i~~vGRl~~~KG~~~li~a~~~l~~~--~----~~lvivG~g-----~--~~~~~~l~~l~~ 333 (466)
T PRK00654 267 NKRALQERFGLPDDDAPLFAMVSRLTEQKGLDLVLEALPELLEQ--G----GQLVLLGTG-----D--PELEEAFRALAA 333 (466)
T ss_pred HHHHHHHHhCCCCCCCcEEEEeeccccccChHHHHHHHHHHHhc--C----CEEEEEecC-----c--HHHHHHHHHHHH
Confidence 3456788887 3 3678999999999999999999999998764 3 348888832 2 134556666665
Q ss_pred HHhccCCCCCCccEEEecCCCCHHHHHHHHHHcCEeEECCCccCCCC---CCCC-CceEEEeccccccccc---------
Q 044635 404 RINQTFGKPGYDPVVLIDEPLKFYERIAYYVVAECCLVTAVRDGSEP---SSPK-KSMLVVSEFIGCSPSL--------- 470 (831)
Q Consensus 404 ~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv~vvtS~~eGma~---~~~~-~g~lVlSe~~G~~~~l--------- 470 (831)
+.+. .++++.+. +.+....+|+.||++|+||.+||++. +++. +.|+|+|...|..+.+
T Consensus 334 ~~~~--------~v~~~~g~-~~~~~~~~~~~aDv~v~PS~~E~~gl~~lEAma~G~p~V~~~~gG~~e~v~~~~~~~~~ 404 (466)
T PRK00654 334 RYPG--------KVGVQIGY-DEALAHRIYAGADMFLMPSRFEPCGLTQLYALRYGTLPIVRRTGGLADTVIDYNPEDGE 404 (466)
T ss_pred HCCC--------cEEEEEeC-CHHHHHHHHhhCCEEEeCCCCCCchHHHHHHHHCCCCEEEeCCCCccceeecCCCCCCC
Confidence 5421 25555543 56667899999999999999999821 2333 4588999988888877
Q ss_pred CCCceeCCCCHHHHHHHHHHHhcCC--HHHHHHHHHHHhhhhccCCHHHHHHHHHHHHHHH
Q 044635 471 SGAIRVNPWNIDAVSDAMDSALEMA--DQEKQLRHEKHYRYVSTHDVGYWARSFLQDLERT 529 (831)
Q Consensus 471 ~~allVnP~d~~~~A~ai~~aL~m~--~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l~~~ 529 (831)
.+|++|+|.|+++++++|.++|... ++.++...++.. ...+++..-++++++-.+++
T Consensus 405 ~~G~lv~~~d~~~la~~i~~~l~~~~~~~~~~~~~~~~~--~~~fsw~~~a~~~~~lY~~~ 463 (466)
T PRK00654 405 ATGFVFDDFNAEDLLRALRRALELYRQPPLWRALQRQAM--AQDFSWDKSAEEYLELYRRL 463 (466)
T ss_pred CceEEeCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHh--ccCCChHHHHHHHHHHHHHH
Confidence 3489999999999999999998632 222222222222 25677777777776655543
No 46
>PRK14098 glycogen synthase; Provisional
Probab=99.84 E-value=5.9e-19 Score=204.39 Aligned_cols=317 Identities=14% Similarity=0.148 Sum_probs=207.9
Q ss_pred hhHHHHHHHHHHHHHHHHHH-cCCCCCEEEEeCccccchHHHHHhhc------CCCeEEEEEeccC-----CChHHhhcC
Q 044635 178 SLWQAYVSVNKIFADRIMEV-INPEDDFVWVHDYHLMVLPTFLRKRF------NRVKLGFFLHSPF-----PSSEIYKTL 245 (831)
Q Consensus 178 ~~w~~Y~~vN~~fa~~i~~~-~~~~~d~vwvhDyhL~llp~~lr~~~------~~~~i~~flH~Pf-----P~~e~f~~l 245 (831)
+....|.-+++..++.+.+. ++| |+|.+||||-.++|.+++++. .++|+.++.|... |...+-..+
T Consensus 119 d~~~rf~~f~~a~l~~~~~~~~~p--DiiH~hdw~t~l~~~~l~~~~~~~~~~~~~~~V~TiHn~~~qg~~~~~~~~~~~ 196 (489)
T PRK14098 119 GSAEKVIFFNVGVLETLQRLGWKP--DIIHCHDWYAGLVPLLLKTVYADHEFFKDIKTVLTIHNVYRQGVLPFKVFQKLL 196 (489)
T ss_pred cHHHHHHHHHHHHHHHHHhcCCCC--CEEEecCcHHHHHHHHHHHHhhhccccCCCCEEEEcCCCcccCCCCHHHHHHhC
Confidence 44567777777777766542 344 899999999999999998754 4789999999742 221111113
Q ss_pred CCh------------HHHHHHHhcCCeEeecCHHhHHHHHHHHHHHhCCeecccCceeeEEEcCEEEEEEEeecccChHH
Q 044635 246 PIR------------EEILRALLNSDLIGFHTFDYARHFLSCCSRMLGLTYESKRGYIGLEYYGRTVSIKILPVGIHMGQ 313 (831)
Q Consensus 246 p~r------------~eil~~ll~~dligf~t~~~~~~Fl~~~~r~l~~~~~~~~~~~~~~~~gr~~~i~v~P~GId~~~ 313 (831)
|+. .-+-.++..||.|---++.|++.-++....-.|++. ....+..++.++|+|||.+.
T Consensus 197 ~~~~~~~~~~~~~~~n~lk~~i~~ad~VitVS~~~a~ei~~~~~~~~gl~~---------~l~~~~~kl~~I~NGID~~~ 267 (489)
T PRK14098 197 PEEVCSGLHREGDEVNMLYTGVEHADLLTTTSPRYAEEIAGDGEEAFGLDK---------VLEERKMRLHGILNGIDTRQ 267 (489)
T ss_pred CHHhhhhhhhcCCcccHHHHHHHhcCcceeeCHHHHHHhCcCCCCCcChHH---------HHHhcCCCeeEEeCCccccc
Confidence 321 123346677888877777777654320000001100 00113457889999999998
Q ss_pred HHHhhCCc-----------chHHHHHHHHHHhc-c--CCcEEEEeccCcccccCHHHHHHHHHHHHHhCCCCCCcEEEEE
Q 044635 314 LQSVLSLP-----------GTEAKVSELIKQFH-D--QGKVMLLGVDDMDIFKGISLKLLAMEQLLIQHPEWQGKVVLVQ 379 (831)
Q Consensus 314 ~~~~~~~~-----------~~~~~~~~lr~~~~-~--~~~~iil~VdRld~~KGi~~~l~A~~~lL~~~P~~~~~vvLvq 379 (831)
|.+..... ........++++++ + +++++|++|||+++.||++.+++|+.++++. + +.|++
T Consensus 268 ~~p~~d~~~~~~~~~~~~~~k~~~k~~l~~~lgl~~~~~~~~i~~vgRl~~~KG~d~li~a~~~l~~~--~----~~lvi 341 (489)
T PRK14098 268 WNPSTDKLIKKRYSIERLDGKLENKKALLEEVGLPFDEETPLVGVIINFDDFQGAELLAESLEKLVEL--D----IQLVI 341 (489)
T ss_pred cCCcccccccccCCcchhhhHHHHHHHHHHHhCCCCccCCCEEEEeccccccCcHHHHHHHHHHHHhc--C----cEEEE
Confidence 86432110 00123456777776 3 3578999999999999999999999998752 3 44888
Q ss_pred EecCCCCCchhHHHHHHHHHHHHHHHhccCCCCCCccEEEecCCCCHHHHHHHHHHcCEeEECCCccCCCC---CCCCCc
Q 044635 380 IANPARGRGKDVKEVQAETYSTVERINQTFGKPGYDPVVLIDEPLKFYERIAYYVVAECCLVTAVRDGSEP---SSPKKS 456 (831)
Q Consensus 380 ig~p~r~~~~~~~~l~~~i~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv~vvtS~~eGma~---~~~~~g 456 (831)
+|. |+. .+++++++++.+. +. .|.+ .+.++.+++..+|++||+||+||..||++. +++..|
T Consensus 342 vG~-----G~~--~~~~~l~~l~~~~----~~----~V~~-~g~~~~~~~~~~~a~aDi~l~PS~~E~~Gl~~lEAma~G 405 (489)
T PRK14098 342 CGS-----GDK--EYEKRFQDFAEEH----PE----QVSV-QTEFTDAFFHLAIAGLDMLLMPGKIESCGMLQMFAMSYG 405 (489)
T ss_pred EeC-----CCH--HHHHHHHHHHHHC----CC----CEEE-EEecCHHHHHHHHHhCCEEEeCCCCCCchHHHHHHHhCC
Confidence 884 221 2456666666553 11 2444 456889999999999999999999999722 334444
Q ss_pred -eEEEeccccccccc-------CCCceeCCCCHHHHHHHHHHHhcC--CHHHHHHHHHHHhhhhccCCHHHHHHHHHHHH
Q 044635 457 -MLVVSEFIGCSPSL-------SGAIRVNPWNIDAVSDAMDSALEM--ADQEKQLRHEKHYRYVSTHDVGYWARSFLQDL 526 (831)
Q Consensus 457 -~lVlSe~~G~~~~l-------~~allVnP~d~~~~A~ai~~aL~m--~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l 526 (831)
++|++...|..+.+ .+|++|+|.|++++|++|.+++.+ .++.++...++. ....+++..-++++++-.
T Consensus 406 ~ppVv~~~GGl~d~v~~~~~~~~~G~l~~~~d~~~la~ai~~~l~~~~~~~~~~~~~~~~--~~~~fsw~~~a~~y~~lY 483 (489)
T PRK14098 406 TIPVAYAGGGIVETIEEVSEDKGSGFIFHDYTPEALVAKLGEALALYHDEERWEELVLEA--MERDFSWKNSAEEYAQLY 483 (489)
T ss_pred CCeEEecCCCCceeeecCCCCCCceeEeCCCCHHHHHHHHHHHHHHHcCHHHHHHHHHHH--hcCCCChHHHHHHHHHHH
Confidence 78888888887766 268999999999999999998743 222222211111 235678777777776655
Q ss_pred HHH
Q 044635 527 ERT 529 (831)
Q Consensus 527 ~~~ 529 (831)
+++
T Consensus 484 ~~~ 486 (489)
T PRK14098 484 REL 486 (489)
T ss_pred HHH
Confidence 543
No 47
>TIGR03449 mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-inositol-1-phosphate 1-alpha-D-N-acetylglucosaminyltransferase. Members of this protein family, found exclusively in the Actinobacteria, are MshA, the glycosyltransferase of mycothiol biosynthesis. Mycothiol replaces glutathione in these species.
Probab=99.83 E-value=2.4e-18 Score=195.23 Aligned_cols=285 Identities=14% Similarity=0.108 Sum_probs=197.7
Q ss_pred CCEEEEeCccccchHHHHHhhcCCCeEEEEEeccCCChHHhhc---CCC--hHHHH--HHHhcCCeEeecCHHhHHHHHH
Q 044635 202 DDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYKT---LPI--REEIL--RALLNSDLIGFHTFDYARHFLS 274 (831)
Q Consensus 202 ~d~vwvhDyhL~llp~~lr~~~~~~~i~~flH~PfP~~e~f~~---lp~--r~eil--~~ll~~dligf~t~~~~~~Fl~ 274 (831)
.|+|.+|++...+++.++++ ..++|+.+.+|..++-...+.. .|. ...++ ..+-.+|.+.+.+...++.+..
T Consensus 102 ~Diih~h~~~~~~~~~~~~~-~~~~p~v~t~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~d~vi~~s~~~~~~~~~ 180 (405)
T TIGR03449 102 YDLIHSHYWLSGQVGWLLRD-RWGVPLVHTAHTLAAVKNAALADGDTPEPEARRIGEQQLVDNADRLIANTDEEARDLVR 180 (405)
T ss_pred CCeEEechHHHHHHHHHHHH-hcCCCEEEeccchHHHHHHhccCCCCCchHHHHHHHHHHHHhcCeEEECCHHHHHHHHH
Confidence 48999998666555556554 3468899999965432221111 121 11221 2345689999999988877754
Q ss_pred HHHHHhCCeecccCceeeEEEcCEEEEEEEeecccChHHHHHhhCCcchHHHHHHHHHHhc-cCCcEEEEeccCcccccC
Q 044635 275 CCSRMLGLTYESKRGYIGLEYYGRTVSIKILPVGIHMGQLQSVLSLPGTEAKVSELIKQFH-DQGKVMLLGVDDMDIFKG 353 (831)
Q Consensus 275 ~~~r~l~~~~~~~~~~~~~~~~gr~~~i~v~P~GId~~~~~~~~~~~~~~~~~~~lr~~~~-~~~~~iil~VdRld~~KG 353 (831)
. .+ ....++.++|+|||.+.|.+. + ....+++++ ..++++|+++||+.+.||
T Consensus 181 ~----~~---------------~~~~ki~vi~ngvd~~~~~~~---~-----~~~~~~~~~~~~~~~~i~~~G~l~~~K~ 233 (405)
T TIGR03449 181 H----YD---------------ADPDRIDVVAPGADLERFRPG---D-----RATERARLGLPLDTKVVAFVGRIQPLKA 233 (405)
T ss_pred H----cC---------------CChhhEEEECCCcCHHHcCCC---c-----HHHHHHhcCCCCCCcEEEEecCCCcccC
Confidence 1 11 123467889999999887421 1 123456665 457889999999999999
Q ss_pred HHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCc-hhHHHHHHHHHHHHHHHhccCCCCCCccEEEecCCCCHHHHHHH
Q 044635 354 ISLKLLAMEQLLIQHPEWQGKVVLVQIANPARGRG-KDVKEVQAETYSTVERINQTFGKPGYDPVVLIDEPLKFYERIAY 432 (831)
Q Consensus 354 i~~~l~A~~~lL~~~P~~~~~vvLvqig~p~r~~~-~~~~~l~~~i~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~al 432 (831)
+..+++|++++++++|+. ++.|+++|.+.. ++ +.. +++++++++.+ ..+.+.+.|.++.+++..+
T Consensus 234 ~~~li~a~~~l~~~~~~~--~~~l~ivG~~~~-~g~~~~----~~l~~~~~~~~-------l~~~v~~~g~~~~~~~~~~ 299 (405)
T TIGR03449 234 PDVLLRAVAELLDRDPDR--NLRVIVVGGPSG-SGLATP----DALIELAAELG-------IADRVRFLPPRPPEELVHV 299 (405)
T ss_pred HHHHHHHHHHHHhhCCCc--ceEEEEEeCCCC-CcchHH----HHHHHHHHHcC-------CCceEEECCCCCHHHHHHH
Confidence 999999999999998872 467999996532 23 333 33444444432 2334556778999999999
Q ss_pred HHHcCEeEECCCccCCCC---CCCC-CceEEEeccccccccc---CCCceeCCCCHHHHHHHHHHHhcCCHHHHHHHHHH
Q 044635 433 YVVAECCLVTAVRDGSEP---SSPK-KSMLVVSEFIGCSPSL---SGAIRVNPWNIDAVSDAMDSALEMADQEKQLRHEK 505 (831)
Q Consensus 433 y~~ADv~vvtS~~eGma~---~~~~-~g~lVlSe~~G~~~~l---~~allVnP~d~~~~A~ai~~aL~m~~~er~~r~~~ 505 (831)
|+.||++++||..||++. +++. +.|+|+|...|..+.+ ..|++++|.|++++|++|.++++. ++++....+.
T Consensus 300 l~~ad~~v~ps~~E~~g~~~lEAma~G~Pvi~~~~~~~~e~i~~~~~g~~~~~~d~~~la~~i~~~l~~-~~~~~~~~~~ 378 (405)
T TIGR03449 300 YRAADVVAVPSYNESFGLVAMEAQACGTPVVAARVGGLPVAVADGETGLLVDGHDPADWADALARLLDD-PRTRIRMGAA 378 (405)
T ss_pred HHhCCEEEECCCCCCcChHHHHHHHcCCCEEEecCCCcHhhhccCCceEECCCCCHHHHHHHHHHHHhC-HHHHHHHHHH
Confidence 999999999999998821 2222 4577777777766666 357999999999999999999974 3445555556
Q ss_pred HhhhhccCCHHHHHHHHHHHHHHH
Q 044635 506 HYRYVSTHDVGYWARSFLQDLERT 529 (831)
Q Consensus 506 ~~~~v~~~~~~~W~~~~l~~l~~~ 529 (831)
.++.+..+++...++++++-+.++
T Consensus 379 ~~~~~~~fsw~~~~~~~~~~y~~~ 402 (405)
T TIGR03449 379 AVEHAAGFSWAATADGLLSSYRDA 402 (405)
T ss_pred HHHHHHhCCHHHHHHHHHHHHHHH
Confidence 677778889888888887766543
No 48
>PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional
Probab=99.83 E-value=3.5e-19 Score=205.19 Aligned_cols=199 Identities=18% Similarity=0.113 Sum_probs=132.2
Q ss_pred cCceeEEecCCCccCCCCCCCCCCCHHHHHHHHHHhhcCCCeEEEECCCCHhhHHHHhCCCC-CceEEecCCEEEEeCCC
Q 044635 571 TTTRAILLDYDGTLMPQASIDKSPNSKTIDILNSLCRDKNNMVFLVSAKSRKTLAEWFSPCE-NLGIAAEHGYFFRLRRD 649 (831)
Q Consensus 571 s~~rli~~D~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~~~-~~~liaenGa~i~~~~~ 649 (831)
.++|+|++|+||||++ .++..+++++++|++|.+ .|+.|++||||+...+..++..+. ..++|++||+.|+.+++
T Consensus 414 ~~~KLIfsDLDGTLLd---~d~~i~~~t~eAL~~L~e-kGI~~VIATGRs~~~i~~l~~~Lgl~~~~I~eNGA~I~~~~~ 489 (694)
T PRK14502 414 QFKKIVYTDLDGTLLN---PLTYSYSTALDALRLLKD-KELPLVFCSAKTMGEQDLYRNELGIKDPFITENGGAIFIPKD 489 (694)
T ss_pred ceeeEEEEECcCCCcC---CCCccCHHHHHHHHHHHH-cCCeEEEEeCCCHHHHHHHHHHcCCCCeEEEcCCCEEEECCC
Confidence 3689999999999999 566677899999999987 599999999999999998887763 45899999999998754
Q ss_pred -------------ceEEEcCCcCCccHHHHHHHHHHHHhccCC----------CeeEeeccceEEEe----ecc------
Q 044635 650 -------------EEWETCIPVADCGWKQIAEPVMKLYTETTD----------GSTIEDKETALVWS----YED------ 696 (831)
Q Consensus 650 -------------~~w~~~~~~~~~~w~~~v~~il~~~~e~~~----------gs~ie~k~~~l~~~----~~~------ 696 (831)
..+.... ..+ .+.+.++++...+... ..++.... ...+. +..
T Consensus 490 ~~~~~~~~~~~~~~~iI~~~-~l~---~e~i~~IL~~lke~l~~~i~ihv~~~~~~i~~~~-d~~~~ei~~~TgL~~~~a 564 (694)
T PRK14502 490 YFRLPFAYDRVAGNYLVIEL-GMA---YKDIRHILKKALAEACTEIENSEKAGNIFITSFG-DMSVEDVSRLTDLNLKQA 564 (694)
T ss_pred cccccccccccCCCeEEEEc-CCC---HHHHHHHHHHHHHhhcceeeeeeccCcEEEecCC-cccHHHHHHhhCCCHHHH
Confidence 1111111 111 2344455544433111 11111100 00000 000
Q ss_pred --CC------CccchHHHHHHHHHHHhHhcCCCeEEEEcCeEEEEEeCCCCHHHHHHHHHHHhhhcCCCcccEEEE--cC
Q 044635 697 --AD------PDFGSCQAKELLDHLESVLANEPVTVKSGQNLVEVKPQGVNKGLVAKRLLSTMQEREMLPDFVLCV--GD 766 (831)
Q Consensus 697 --~d------~~~~~~~a~el~~~L~~~l~~~~v~v~~g~~~vEV~p~gvnKG~al~~Ll~~l~~~g~~~d~vla~--GD 766 (831)
+. +-+... ..+.++.+.+.+....+.+..+..++||. +++|||.|+++|++.+ +++.+++++| ||
T Consensus 565 ~~a~~Re~seKIl~~g-d~e~Leel~~~L~~~~l~v~~g~rfleI~-~gvdKG~AL~~L~e~~---gI~~~eViafalGD 639 (694)
T PRK14502 565 ELAKQREYSETVHIEG-DKRSTNIVLNHIQQSGLEYSFGGRFYEVT-GGNDKGKAIKILNELF---RLNFGNIHTFGLGD 639 (694)
T ss_pred HHHhhccCceeEEEcC-CHHHHHHHHHHHHHcCcEEEECCEEEEeC-CCCCHHHHHHHHHHHh---CCCccceEEEEcCC
Confidence 00 000000 01233444444444356677799999999 5999999999999998 8888999999 99
Q ss_pred CchhHHHHHHcchhcCC
Q 044635 767 DRSDEDMFEVIISSMAG 783 (831)
Q Consensus 767 ~~NDe~Mf~~a~~~~~~ 783 (831)
+.||++||++++.+++|
T Consensus 640 s~NDisMLe~Ag~gVAM 656 (694)
T PRK14502 640 SENDYSMLETVDSPILV 656 (694)
T ss_pred cHhhHHHHHhCCceEEE
Confidence 99999999999965443
No 49
>TIGR02095 glgA glycogen/starch synthases, ADP-glucose type. This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate.
Probab=99.83 E-value=1.4e-18 Score=201.62 Aligned_cols=309 Identities=16% Similarity=0.188 Sum_probs=199.9
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCEEEEeCccccchHHHHHhhcC--CCeEEEEEeccCC----ChHHhhcCCChH------
Q 044635 182 AYVSVNKIFADRIMEVINPEDDFVWVHDYHLMVLPTFLRKRFN--RVKLGFFLHSPFP----SSEIYKTLPIRE------ 249 (831)
Q Consensus 182 ~Y~~vN~~fa~~i~~~~~~~~d~vwvhDyhL~llp~~lr~~~~--~~~i~~flH~PfP----~~e~f~~lp~r~------ 249 (831)
.|..+++..++.+... ...-|+|.+||+|-.++|.++++... ++|+.++.|...+ +.+.+..++...
T Consensus 110 r~~~f~~a~~~~~~~~-~~~~DiiH~hdw~~~~~~~~l~~~~~~~~~~~v~TiH~~~~~g~~~~~~~~~~~~~~~~~~~~ 188 (473)
T TIGR02095 110 RFAFFSRAAAELLSGL-GWQPDVVHAHDWHTALVPALLKAVYRPNPIKTVFTIHNLAYQGVFPADDFSELGLPPEYFHME 188 (473)
T ss_pred HHHHHHHHHHHHHHhc-CCCCCEEEECCcHHHHHHHHHHhhccCCCCCEEEEcCCCccCCcCCHHHHHHcCCChHHcCch
Confidence 3444444444444332 11238999999999999999988765 3899999997643 122222222110
Q ss_pred ---------HHHHHHhcCCeEeecCHHhHHHHHHHHHHHhCCeecccCceeeEE--EcCEEEEEEEeecccChHHHHHhh
Q 044635 250 ---------EILRALLNSDLIGFHTFDYARHFLSCCSRMLGLTYESKRGYIGLE--YYGRTVSIKILPVGIHMGQLQSVL 318 (831)
Q Consensus 250 ---------eil~~ll~~dligf~t~~~~~~Fl~~~~r~l~~~~~~~~~~~~~~--~~gr~~~i~v~P~GId~~~~~~~~ 318 (831)
-+-.++..||.|-.-++.|++..... ..|. +++ +..+..++.++|+|||.+.|.+..
T Consensus 189 ~~~~~~~~~~~k~~~~~ad~v~tVS~~~~~ei~~~---~~~~---------~l~~~l~~~~~ki~~I~NGid~~~~~p~~ 256 (473)
T TIGR02095 189 GLEFYGRVNFLKGGIVYADRVTTVSPTYAREILTP---EFGY---------GLDGVLKARSGKLRGILNGIDTEVWNPAT 256 (473)
T ss_pred hhhcCCchHHHHHHHHhCCcCeecCHhHHHHhcCC---cCCc---------cchhHHHhcCCCeEEEeCCCCccccCCCC
Confidence 12335666777777676666554321 0000 010 011345788999999999886421
Q ss_pred CCc-----------chHHHHHHHHHHhc-cC--CcEEEEeccCcccccCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCC
Q 044635 319 SLP-----------GTEAKVSELIKQFH-DQ--GKVMLLGVDDMDIFKGISLKLLAMEQLLIQHPEWQGKVVLVQIANPA 384 (831)
Q Consensus 319 ~~~-----------~~~~~~~~lr~~~~-~~--~~~iil~VdRld~~KGi~~~l~A~~~lL~~~P~~~~~vvLvqig~p~ 384 (831)
... .-......++++++ +. ++++|+++||+.+.||++.+++|++++.++. +.|+++|..
T Consensus 257 ~~~~~~~~~~~~~~~k~~~k~~l~~~~gl~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~------~~lvi~G~g- 329 (473)
T TIGR02095 257 DPYLKANYSADDLAGKAENKEALQEELGLPVDDDVPLFGVISRLTQQKGVDLLLAALPELLELG------GQLVVLGTG- 329 (473)
T ss_pred CcccccCcCccchhhhhhhHHHHHHHcCCCccCCCCEEEEEecCccccChHHHHHHHHHHHHcC------cEEEEECCC-
Confidence 100 01123456788887 43 6889999999999999999999999987642 448888842
Q ss_pred CCCchhHHHHHHHHHHHHHHHhccCCCCCCccEEEecCCCCHHHHHHHHHHcCEeEECCCccCCC---CCCCC-CceEEE
Q 044635 385 RGRGKDVKEVQAETYSTVERINQTFGKPGYDPVVLIDEPLKFYERIAYYVVAECCLVTAVRDGSE---PSSPK-KSMLVV 460 (831)
Q Consensus 385 r~~~~~~~~l~~~i~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv~vvtS~~eGma---~~~~~-~g~lVl 460 (831)
+ .++++++.+++.+. +. .+.++. ..+.+++..+|+.||++++||..||+. .+++. +.|+|+
T Consensus 330 ----~--~~~~~~l~~~~~~~----~~----~v~~~~-~~~~~~~~~~~~~aDv~l~pS~~E~~gl~~lEAma~G~pvI~ 394 (473)
T TIGR02095 330 ----D--PELEEALRELAERY----PG----NVRVII-GYDEALAHLIYAGADFILMPSRFEPCGLTQLYAMRYGTVPIV 394 (473)
T ss_pred ----C--HHHHHHHHHHHHHC----CC----cEEEEE-cCCHHHHHHHHHhCCEEEeCCCcCCcHHHHHHHHHCCCCeEE
Confidence 2 23456666666542 21 244443 467888899999999999999999882 12222 458999
Q ss_pred eccccccccc---------CCCceeCCCCHHHHHHHHHHHhcC---CHHHHHHHHHHHhhhhccCCHHHHHHHHHHHHH
Q 044635 461 SEFIGCSPSL---------SGAIRVNPWNIDAVSDAMDSALEM---ADQEKQLRHEKHYRYVSTHDVGYWARSFLQDLE 527 (831)
Q Consensus 461 Se~~G~~~~l---------~~allVnP~d~~~~A~ai~~aL~m---~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l~ 527 (831)
|...|..+.+ .+|++++|.|++++|++|.++|.+ .++.++...++.. ...+++...++++++-.+
T Consensus 395 s~~gg~~e~v~~~~~~~~~~~G~l~~~~d~~~la~~i~~~l~~~~~~~~~~~~~~~~~~--~~~fsw~~~a~~~~~~Y~ 471 (473)
T TIGR02095 395 RRTGGLADTVVDGDPEAESGTGFLFEEYDPGALLAALSRALRLYRQDPSLWEALQKNAM--SQDFSWDKSAKQYVELYR 471 (473)
T ss_pred ccCCCccceEecCCCCCCCCceEEeCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHh--ccCCCcHHHHHHHHHHHH
Confidence 9998888877 247999999999999999999873 2233332222222 256788887777765443
No 50
>PRK14099 glycogen synthase; Provisional
Probab=99.82 E-value=1.2e-18 Score=201.70 Aligned_cols=290 Identities=18% Similarity=0.179 Sum_probs=186.2
Q ss_pred CEEEEeCccccchHHHHHhh-cCCCeEEEEEecc-----CCChHHhhc--CCCh-------------HHHHHHHhcCCeE
Q 044635 203 DFVWVHDYHLMVLPTFLRKR-FNRVKLGFFLHSP-----FPSSEIYKT--LPIR-------------EEILRALLNSDLI 261 (831)
Q Consensus 203 d~vwvhDyhL~llp~~lr~~-~~~~~i~~flH~P-----fP~~e~f~~--lp~r-------------~eil~~ll~~dli 261 (831)
|+|.+||||-.++|.+++.+ ..++++.++.|.. ||. +.+.. +|.. .-+-.++..||.|
T Consensus 135 DIiH~Hdw~~~l~~~~l~~~~~~~~~~V~TiHn~~~qg~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~i~~ad~v 213 (485)
T PRK14099 135 DIVHAHDWQAGLAPAYLHYSGRPAPGTVFTIHNLAFQGQFPR-ELLGALGLPPSAFSLDGVEYYGGIGYLKAGLQLADRI 213 (485)
T ss_pred CEEEECCcHHHHHHHHHHhCCCCCCCEEEeCCCCCCCCcCCH-HHHHHcCCChHHcCchhhhhCCCccHHHHHHHhcCee
Confidence 89999999999999998753 3467899999964 322 11111 1110 0133445566666
Q ss_pred eecCHHhHHHHHHHHHHHhCCeecccCceeeEE--EcCEEEEEEEeecccChHHHHHhhCCc-----c------hHHHHH
Q 044635 262 GFHTFDYARHFLSCCSRMLGLTYESKRGYIGLE--YYGRTVSIKILPVGIHMGQLQSVLSLP-----G------TEAKVS 328 (831)
Q Consensus 262 gf~t~~~~~~Fl~~~~r~l~~~~~~~~~~~~~~--~~gr~~~i~v~P~GId~~~~~~~~~~~-----~------~~~~~~ 328 (831)
---++.|++.....- .| .+++ +..+..++.++|+|||.+.|.+..... . .....+
T Consensus 214 itVS~~~a~ei~~~~---~g---------~gl~~~l~~~~~ki~vI~NGID~~~f~p~~~~~~~~~~~~~~~~~k~~~k~ 281 (485)
T PRK14099 214 TTVSPTYALEIQGPE---AG---------MGLDGLLRQRADRLSGILNGIDTAVWNPATDELIAATYDVETLAARAANKA 281 (485)
T ss_pred eecChhHHHHHhccc---CC---------cChHHHHHhhCCCeEEEecCCchhhccccccchhhhcCChhHHHhHHHhHH
Confidence 655665555433200 00 0000 011345788999999999886532110 0 011235
Q ss_pred HHHHHhc-cC--CcEEEEeccCcccccCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHH
Q 044635 329 ELIKQFH-DQ--GKVMLLGVDDMDIFKGISLKLLAMEQLLIQHPEWQGKVVLVQIANPARGRGKDVKEVQAETYSTVERI 405 (831)
Q Consensus 329 ~lr~~~~-~~--~~~iil~VdRld~~KGi~~~l~A~~~lL~~~P~~~~~vvLvqig~p~r~~~~~~~~l~~~i~~lv~~I 405 (831)
.++++++ +. +.++|++|||+++.||++.+++|+.+++++ + +.|+++|. |+ .++++++++++.+.
T Consensus 282 ~l~~~~gl~~~~~~~li~~VgRL~~~KG~d~Li~A~~~l~~~--~----~~lvivG~-----G~--~~~~~~l~~l~~~~ 348 (485)
T PRK14099 282 ALQARFGLDPDPDALLLGVISRLSWQKGLDLLLEALPTLLGE--G----AQLALLGS-----GD--AELEARFRAAAQAY 348 (485)
T ss_pred HHHHHcCCCcccCCcEEEEEecCCccccHHHHHHHHHHHHhc--C----cEEEEEec-----CC--HHHHHHHHHHHHHC
Confidence 6778887 32 467888999999999999999999998753 3 34888884 22 23455666665542
Q ss_pred hccCCCCCCccEEEecCCCCHHHHHHHH-HHcCEeEECCCccCCC---CCCCCCc-eEEEeccccccccc----------
Q 044635 406 NQTFGKPGYDPVVLIDEPLKFYERIAYY-VVAECCLVTAVRDGSE---PSSPKKS-MLVVSEFIGCSPSL---------- 470 (831)
Q Consensus 406 N~~~g~~~~~pv~~~~~~v~~~el~aly-~~ADv~vvtS~~eGma---~~~~~~g-~lVlSe~~G~~~~l---------- 470 (831)
+. .++++.+. .+++..+| +.||+||+||.+||++ .+++..| ++|+|..+|..+.+
T Consensus 349 ----~~----~v~~~~G~--~~~l~~~~~a~aDifv~PS~~E~fGl~~lEAma~G~ppVvs~~GGl~d~V~~~~~~~~~~ 418 (485)
T PRK14099 349 ----PG----QIGVVIGY--DEALAHLIQAGADALLVPSRFEPCGLTQLCALRYGAVPVVARVGGLADTVVDANEMAIAT 418 (485)
T ss_pred ----CC----CEEEEeCC--CHHHHHHHHhcCCEEEECCccCCCcHHHHHHHHCCCCcEEeCCCCccceeeccccccccc
Confidence 21 25455554 67888887 4699999999999983 2444455 88889888887766
Q ss_pred --CCCceeCCCCHHHHHHHHHHHhc--CCHHHHHHHHHHHhhhhccCCHHHHHHHHHHHHHHHH
Q 044635 471 --SGAIRVNPWNIDAVSDAMDSALE--MADQEKQLRHEKHYRYVSTHDVGYWARSFLQDLERTC 530 (831)
Q Consensus 471 --~~allVnP~d~~~~A~ai~~aL~--m~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l~~~~ 530 (831)
.+|++|+|.|++++|++|.+++. ..++.++...++.+ ...+++..-++++++-.+++.
T Consensus 419 ~~~~G~l~~~~d~~~La~ai~~a~~l~~d~~~~~~l~~~~~--~~~fSw~~~a~~y~~lY~~l~ 480 (485)
T PRK14099 419 GVATGVQFSPVTADALAAALRKTAALFADPVAWRRLQRNGM--TTDVSWRNPAQHYAALYRSLV 480 (485)
T ss_pred CCCceEEeCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHhh--hhcCChHHHHHHHHHHHHHHH
Confidence 25899999999999999998532 13333333232222 367888888888776666554
No 51
>TIGR02472 sucr_P_syn_N sucrose-phosphate synthase, putative, glycosyltransferase domain. This family consists of the N-terminal regions, or in some cases the entirety, of bacterial proteins closely related to plant sucrose-phosphate synthases (SPS). The C-terminal domain (TIGR02471), found with most members of this family, resembles both bona fide plant sucrose-phosphate phosphatases (SPP) and the SPP-like domain of plant SPS. At least two members of this family lack the SPP-like domain, which may have binding or regulatory rather than enzymatic activity by analogy to plant SPS. This enzyme produces sucrose 6-phosphate and UDP from UDP-glucose and D-fructose 6-phosphate, and may be encoded near the gene for fructokinase.
Probab=99.82 E-value=1.5e-18 Score=199.36 Aligned_cols=313 Identities=15% Similarity=0.131 Sum_probs=185.9
Q ss_pred HHHHHHHHHHHHHHHHHHcCCCCCEEEEeCccccchHHHHHhhcCCCeEEEEEeccCCChH--Hhh------------cC
Q 044635 180 WQAYVSVNKIFADRIMEVINPEDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSE--IYK------------TL 245 (831)
Q Consensus 180 w~~Y~~vN~~fa~~i~~~~~~~~d~vwvhDyhL~llp~~lr~~~~~~~i~~flH~PfP~~e--~f~------------~l 245 (831)
|.....+...+...+.+... ..|+|.+|+++-.++..++++.. ++|+.+..|....... +.. .+
T Consensus 94 ~~~~~~~~~~l~~~~~~~~~-~~DvIH~h~~~~~~~~~~~~~~~-~~p~V~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (439)
T TIGR02472 94 WPYLDELADNLLQHLRQQGH-LPDLIHAHYADAGYVGARLSRLL-GVPLIFTGHSLGREKRRRLLAAGLKPQQIEKQYNI 171 (439)
T ss_pred hhhHHHHHHHHHHHHHHcCC-CCCEEEEcchhHHHHHHHHHHHh-CCCEEEecccccchhhhhcccCCCChhhhhhhcch
Confidence 44444444445454443321 13999999987666666665544 6799999997532211 000 00
Q ss_pred CChH-HHHHHHhcCCeEeecCHHhHHHHHHHHHHHhCCeecccCceeeEEE-cCEEEEEEEeecccChHHHHHhhCCcch
Q 044635 246 PIRE-EILRALLNSDLIGFHTFDYARHFLSCCSRMLGLTYESKRGYIGLEY-YGRTVSIKILPVGIHMGQLQSVLSLPGT 323 (831)
Q Consensus 246 p~r~-eil~~ll~~dligf~t~~~~~~Fl~~~~r~l~~~~~~~~~~~~~~~-~gr~~~i~v~P~GId~~~~~~~~~~~~~ 323 (831)
+.+- .....+-.+|.|...+...++.-+. .+ +-...++.++|+|||++.|.+....+..
T Consensus 172 ~~~~~~~~~~~~~ad~ii~~s~~~~~~~~~-------------------~~~~~~~~ki~vIpnGvd~~~f~~~~~~~~~ 232 (439)
T TIGR02472 172 SRRIEAEEETLAHASLVITSTHQEIEEQYA-------------------LYDSYQPERMQVIPPGVDLSRFYPPQSSEET 232 (439)
T ss_pred HHHHHHHHHHHHhCCEEEECCHHHHHHHHH-------------------hccCCCccceEEECCCcChhhcCCCCccccc
Confidence 1110 0112333466655544332221110 00 1123478889999999988643221111
Q ss_pred HHHHHHHHHHhc-cCCcEEEEeccCcccccCHHHHHHHHHHHHHhCCCCCCcEEEEEEecC-CCCCch-hHHHHHHHHHH
Q 044635 324 EAKVSELIKQFH-DQGKVMLLGVDDMDIFKGISLKLLAMEQLLIQHPEWQGKVVLVQIANP-ARGRGK-DVKEVQAETYS 400 (831)
Q Consensus 324 ~~~~~~lr~~~~-~~~~~iil~VdRld~~KGi~~~l~A~~~lL~~~P~~~~~vvLvqig~p-~r~~~~-~~~~l~~~i~~ 400 (831)
...+..+++++ .+++++|++|||+++.||+..+|+||.++.+..+.. ++++ ++|.. .+.... ...++.+++..
T Consensus 233 -~~~~~~~~~~~~~~~~~~i~~vGrl~~~Kg~~~li~A~~~l~~~~~~~--~l~l-i~G~g~~~~~l~~~~~~~~~~~~~ 308 (439)
T TIGR02472 233 -SEIDNLLAPFLKDPEKPPILAISRPDRRKNIPSLVEAYGRSPKLQEMA--NLVL-VLGCRDDIRKMESQQREVLQKVLL 308 (439)
T ss_pred -hhHHHHHHhhccccCCcEEEEEcCCcccCCHHHHHHHHHhChhhhhhc--cEEE-EeCCccccccccHHHHHHHHHHHH
Confidence 11222223333 456789999999999999999999998642211111 2322 34521 111111 01122333444
Q ss_pred HHHHHhccCCCCCCccEEEecCCCCHHHHHHHHHHc----CEeEECCCccCCC---CCCCC-CceEEEecccccccccC-
Q 044635 401 TVERINQTFGKPGYDPVVLIDEPLKFYERIAYYVVA----ECCLVTAVRDGSE---PSSPK-KSMLVVSEFIGCSPSLS- 471 (831)
Q Consensus 401 lv~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~A----Dv~vvtS~~eGma---~~~~~-~g~lVlSe~~G~~~~l~- 471 (831)
++.++ ++...+.|.+.++.+++.++|+.| |+||+||.+|||. .+++. +.|+|+|...|+.+.+.
T Consensus 309 ~~~~~-------~l~~~V~f~g~~~~~~~~~~~~~a~~~~Dv~v~pS~~E~fg~~~lEAma~G~PvV~s~~gg~~eiv~~ 381 (439)
T TIGR02472 309 LIDRY-------DLYGKVAYPKHHRPDDVPELYRLAARSRGIFVNPALTEPFGLTLLEAAACGLPIVATDDGGPRDIIAN 381 (439)
T ss_pred HHHHc-------CCCceEEecCCCCHHHHHHHHHHHhhcCCEEecccccCCcccHHHHHHHhCCCEEEeCCCCcHHHhcC
Confidence 44442 233345567889999999999988 9999999999982 12222 45788888877777663
Q ss_pred --CCceeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHhhhh-ccCCHHHHHHHHHHH
Q 044635 472 --GAIRVNPWNIDAVSDAMDSALEMADQEKQLRHEKHYRYV-STHDVGYWARSFLQD 525 (831)
Q Consensus 472 --~allVnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v-~~~~~~~W~~~~l~~ 525 (831)
+|++|+|.|++++|++|.++++.+ ++++...++.++++ ..+++..-++++++-
T Consensus 382 ~~~G~lv~~~d~~~la~~i~~ll~~~-~~~~~~~~~a~~~~~~~fsw~~~~~~~~~l 437 (439)
T TIGR02472 382 CRNGLLVDVLDLEAIASALEDALSDS-SQWQLWSRNGIEGVRRHYSWDAHVEKYLRI 437 (439)
T ss_pred CCcEEEeCCCCHHHHHHHHHHHHhCH-HHHHHHHHHHHHHHHHhCCHHHHHHHHHHH
Confidence 589999999999999999999854 55666666677766 457877777766654
No 52
>cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases. ExpC in Rhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucan (exopolysaccharide II).
Probab=99.81 E-value=2.7e-18 Score=194.56 Aligned_cols=297 Identities=14% Similarity=0.127 Sum_probs=188.6
Q ss_pred HHHHHHHHHHHHHHHcCCCCCEEEEeCccccchHHHHHhhcCCCeEEEEEeccCCC--hHH-hh-cCCCh--------HH
Q 044635 183 YVSVNKIFADRIMEVINPEDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPS--SEI-YK-TLPIR--------EE 250 (831)
Q Consensus 183 Y~~vN~~fa~~i~~~~~~~~d~vwvhDyhL~llp~~lr~~~~~~~i~~flH~PfP~--~e~-f~-~lp~r--------~e 250 (831)
...+-+.......+.+.| |+|..| +.+....++++.+|++++..++|..|-. .+. |. ..+.+ ..
T Consensus 71 ~~~~~~~~~~~~~~~~~p--dvi~~h--~~~~~~~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (396)
T cd03818 71 GQAVARALLALRAKGFRP--DVIVAH--PGWGETLFLKDVWPDAPLIGYFEFYYRAEGADVGFDPEFPPSLDDALRLRNR 146 (396)
T ss_pred HHHHHHHHHHHHhcCCCC--CEEEEC--CccchhhhHHHhCCCCCEEEEEeeeecCCCCCCCCCCCCCCchhHHHHHHHh
Confidence 333333333333344455 899998 5667777899999999998877643311 110 11 11111 11
Q ss_pred ---HHHHHhcCCeEeecCHHhHHHHHHHHHHHhCCeecccCceeeEEEcCEEEEEEEeecccChHHHHHhhCCcchHHHH
Q 044635 251 ---ILRALLNSDLIGFHTFDYARHFLSCCSRMLGLTYESKRGYIGLEYYGRTVSIKILPVGIHMGQLQSVLSLPGTEAKV 327 (831)
Q Consensus 251 ---il~~ll~~dligf~t~~~~~~Fl~~~~r~l~~~~~~~~~~~~~~~~gr~~~i~v~P~GId~~~~~~~~~~~~~~~~~ 327 (831)
+...+-.+|.+...+......|.. .. ..++.++|+|||.+.|.+... ..
T Consensus 147 ~~~~~~~~~~ad~vi~~s~~~~~~~~~--------------------~~--~~ki~vI~ngvd~~~f~~~~~------~~ 198 (396)
T cd03818 147 NALILLALAQADAGVSPTRWQRSTFPA--------------------EL--RSRISVIHDGIDTDRLRPDPQ------AR 198 (396)
T ss_pred hhHhHHHHHhCCEEECCCHHHHhhCcH--------------------hh--ccceEEeCCCccccccCCCch------hh
Confidence 234566778887766544443321 01 136788999999988853211 11
Q ss_pred HHHHHHhc-cCCcEEEEeccC-cccccCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchh---HHHHHHHHHHHH
Q 044635 328 SELIKQFH-DQGKVMLLGVDD-MDIFKGISLKLLAMEQLLIQHPEWQGKVVLVQIANPARGRGKD---VKEVQAETYSTV 402 (831)
Q Consensus 328 ~~lr~~~~-~~~~~iil~VdR-ld~~KGi~~~l~A~~~lL~~~P~~~~~vvLvqig~p~r~~~~~---~~~l~~~i~~lv 402 (831)
..++.... ..++++|+++|| +.+.||++.+++|+.++.+++|+++ |+++|......+.. ..++++ ++.
T Consensus 199 ~~~~~~~~~~~~~~~i~~vgR~l~~~Kg~~~ll~a~~~l~~~~~~~~----lvivG~~~~~~g~~~~~~~~~~~---~~~ 271 (396)
T cd03818 199 LRLPNGRVLTPGDEVITFVARNLEPYRGFHVFMRALPRLLRARPDAR----VVIVGGDGVSYGAPPPDGESWKQ---HML 271 (396)
T ss_pred hcccccccCCCCCeEEEEECCCcccccCHHHHHHHHHHHHHHCCCcE----EEEEcCCCcccCCCCCCcccHHH---HHH
Confidence 11222221 257789999998 9999999999999999999999877 99898532111110 011122 222
Q ss_pred HHHhccCCCCCCccEEEecCCCCHHHHHHHHHHcCEeEECCCccCCC---CCCCC-CceEEEeccccccccc---CCCce
Q 044635 403 ERINQTFGKPGYDPVVLIDEPLKFYERIAYYVVAECCLVTAVRDGSE---PSSPK-KSMLVVSEFIGCSPSL---SGAIR 475 (831)
Q Consensus 403 ~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv~vvtS~~eGma---~~~~~-~g~lVlSe~~G~~~~l---~~all 475 (831)
++++.+.+. ..| .+.|.++.+++.++|+.||++++||..||++ .+++. +.|+|+|...|..+.+ .+|++
T Consensus 272 ~~~~~~~~~---~~V-~f~G~v~~~~~~~~l~~adv~v~~s~~e~~~~~llEAmA~G~PVIas~~~g~~e~i~~~~~G~l 347 (396)
T cd03818 272 DELGGRLDL---SRV-HFLGRVPYDQYLALLQVSDVHVYLTYPFVLSWSLLEAMACGCLVVGSDTAPVREVITDGENGLL 347 (396)
T ss_pred HHhhcccCc---ceE-EEeCCCCHHHHHHHHHhCcEEEEcCcccccchHHHHHHHCCCCEEEcCCCCchhhcccCCceEE
Confidence 333322221 134 4567899999999999999999999998862 12222 4577777777666666 35899
Q ss_pred eCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHhhhhcc-CCHHHHHHHHH
Q 044635 476 VNPWNIDAVSDAMDSALEMADQEKQLRHEKHYRYVST-HDVGYWARSFL 523 (831)
Q Consensus 476 VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~-~~~~~W~~~~l 523 (831)
|+|.|++++|++|.++|+.+ +++....++.++++.+ +++...+++++
T Consensus 348 v~~~d~~~la~~i~~ll~~~-~~~~~l~~~ar~~~~~~fs~~~~~~~~~ 395 (396)
T cd03818 348 VDFFDPDALAAAVIELLDDP-ARRARLRRAARRTALRYDLLSVCLPRQL 395 (396)
T ss_pred cCCCCHHHHHHHHHHHHhCH-HHHHHHHHHHHHHHHHhccHHHHHHHHh
Confidence 99999999999999999865 4555566677777766 66555555443
No 53
>PRK15427 colanic acid biosynthesis glycosyltransferase WcaL; Provisional
Probab=99.80 E-value=1.4e-17 Score=189.24 Aligned_cols=270 Identities=16% Similarity=0.107 Sum_probs=184.8
Q ss_pred CCEEEEeCccccchHHHHHhh-cCCCeEEEEEeccCCC-hHHhhcCCChHHHHHHHhcCCeEeecCHHhHHHHHHHHHHH
Q 044635 202 DDFVWVHDYHLMVLPTFLRKR-FNRVKLGFFLHSPFPS-SEIYKTLPIREEILRALLNSDLIGFHTFDYARHFLSCCSRM 279 (831)
Q Consensus 202 ~d~vwvhDyhL~llp~~lr~~-~~~~~i~~flH~PfP~-~e~f~~lp~r~eil~~ll~~dligf~t~~~~~~Fl~~~~r~ 279 (831)
-|+|..|..+.-.+..++++. ....++.+++|-+-.. ..+.. ..+..+-+.+-.+|.|-..+....+.+.+
T Consensus 119 ~diihaH~~~~~~~~~~~~~~~~~~~~~~~t~Hg~d~~~~~~~~--~~~~~~~~~~~~ad~vv~~S~~~~~~l~~----- 191 (406)
T PRK15427 119 ADVFIAHFGPAGVTAAKLRELGVLRGKIATIFHGIDISSREVLN--HYTPEYQQLFRRGDLMLPISDLWAGRLQK----- 191 (406)
T ss_pred CCEEEEcCChHHHHHHHHHHhCCCCCCeEEEEcccccccchhhh--hhhHHHHHHHHhCCEEEECCHHHHHHHHH-----
Confidence 389999987766666777663 2245677888854211 11110 11122333344688887766544433321
Q ss_pred hCCeecccCceeeEEEcCEEEEEEEeecccChHHHHHhhCCcchHHHHHHHHHHhccCCcEEEEeccCcccccCHHHHHH
Q 044635 280 LGLTYESKRGYIGLEYYGRTVSIKILPVGIHMGQLQSVLSLPGTEAKVSELIKQFHDQGKVMLLGVDDMDIFKGISLKLL 359 (831)
Q Consensus 280 l~~~~~~~~~~~~~~~~gr~~~i~v~P~GId~~~~~~~~~~~~~~~~~~~lr~~~~~~~~~iil~VdRld~~KGi~~~l~ 359 (831)
+|. ...+|.++|+|||.+.|..... ... .+...|++|||+.+.||++.+++
T Consensus 192 ~g~---------------~~~ki~vi~nGvd~~~f~~~~~------------~~~--~~~~~il~vGrl~~~Kg~~~ll~ 242 (406)
T PRK15427 192 MGC---------------PPEKIAVSRMGVDMTRFSPRPV------------KAP--ATPLEIISVARLTEKKGLHVAIE 242 (406)
T ss_pred cCC---------------CHHHEEEcCCCCCHHHcCCCcc------------ccC--CCCeEEEEEeCcchhcCHHHHHH
Confidence 121 1236778999999988742110 011 34567999999999999999999
Q ss_pred HHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhccCCCCCCccEEEecCCCCHHHHHHHHHHcCEe
Q 044635 360 AMEQLLIQHPEWQGKVVLVQIANPARGRGKDVKEVQAETYSTVERINQTFGKPGYDPVVLIDEPLKFYERIAYYVVAECC 439 (831)
Q Consensus 360 A~~~lL~~~P~~~~~vvLvqig~p~r~~~~~~~~l~~~i~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv~ 439 (831)
|+..+.+++|+++ |+++| +|+..+ ++++++++. +..+.+.+.|.++++|+..+|+.||+|
T Consensus 243 a~~~l~~~~~~~~----l~ivG-----~G~~~~----~l~~~~~~~-------~l~~~V~~~G~~~~~el~~~l~~aDv~ 302 (406)
T PRK15427 243 ACRQLKEQGVAFR----YRILG-----IGPWER----RLRTLIEQY-------QLEDVVEMPGFKPSHEVKAMLDDADVF 302 (406)
T ss_pred HHHHHHhhCCCEE----EEEEE-----CchhHH----HHHHHHHHc-------CCCCeEEEeCCCCHHHHHHHHHhCCEE
Confidence 9999988888765 88888 444433 444444442 233466778899999999999999999
Q ss_pred EECCCc------cCCC---CCCCC-CceEEEeccccccccc---CCCceeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHH
Q 044635 440 LVTAVR------DGSE---PSSPK-KSMLVVSEFIGCSPSL---SGAIRVNPWNIDAVSDAMDSALEMADQEKQLRHEKH 506 (831)
Q Consensus 440 vvtS~~------eGma---~~~~~-~g~lVlSe~~G~~~~l---~~allVnP~d~~~~A~ai~~aL~m~~~er~~r~~~~ 506 (831)
|+||.. ||+. .+++. +.|+|+|..+|..+.+ .+|++|+|.|++++|++|.+++++++++++...++.
T Consensus 303 v~pS~~~~~g~~Eg~p~~llEAma~G~PVI~t~~~g~~E~v~~~~~G~lv~~~d~~~la~ai~~l~~~d~~~~~~~~~~a 382 (406)
T PRK15427 303 LLPSVTGADGDMEGIPVALMEAMAVGIPVVSTLHSGIPELVEADKSGWLVPENDAQALAQRLAAFSQLDTDELAPVVKRA 382 (406)
T ss_pred EECCccCCCCCccCccHHHHHHHhCCCCEEEeCCCCchhhhcCCCceEEeCCCCHHHHHHHHHHHHhCCHHHHHHHHHHH
Confidence 999984 8872 12222 4577777777776666 358999999999999999999997777777777778
Q ss_pred hhhh-ccCCHHHHHHHHHHHHH
Q 044635 507 YRYV-STHDVGYWARSFLQDLE 527 (831)
Q Consensus 507 ~~~v-~~~~~~~W~~~~l~~l~ 527 (831)
++++ .++++...++++.+-++
T Consensus 383 r~~v~~~f~~~~~~~~l~~~~~ 404 (406)
T PRK15427 383 REKVETDFNQQVINRELASLLQ 404 (406)
T ss_pred HHHHHHhcCHHHHHHHHHHHHh
Confidence 8777 55888888887766554
No 54
>TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase. Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles.
Probab=99.80 E-value=1.9e-18 Score=180.08 Aligned_cols=186 Identities=20% Similarity=0.172 Sum_probs=118.7
Q ss_pred eEEecCCCccCCCCCCCCCCCHHHHHHHHHHhhcCCCeEEEECCCCHhhHHHHhCCCC-CceEEecCCEEEEeCCC----
Q 044635 575 AILLDYDGTLMPQASIDKSPNSKTIDILNSLCRDKNNMVFLVSAKSRKTLAEWFSPCE-NLGIAAEHGYFFRLRRD---- 649 (831)
Q Consensus 575 li~~D~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~~~-~~~liaenGa~i~~~~~---- 649 (831)
+|++|+||||++ .+. .+++++++|++|.+ .|+.++++|||+...+..++..+. ..++|++||+.|+.+.+
T Consensus 1 li~~DlDGTLl~---~~~-~~~~~~~ai~~l~~-~G~~~vi~TgR~~~~~~~~~~~lg~~~~~I~~NGa~I~~~~~~~~~ 75 (225)
T TIGR02461 1 VIFTDLDGTLLP---PGY-EPGPAREALEELKD-LGFPIVFVSSKTRAEQEYYREELGVEPPFIVENGGAIFIPRGYFPF 75 (225)
T ss_pred CEEEeCCCCCcC---CCC-CchHHHHHHHHHHH-CCCEEEEEeCCCHHHHHHHHHHcCCCCcEEEcCCcEEEecCccccc
Confidence 689999999998 333 45689999999987 599999999999999998887763 45899999999998643
Q ss_pred ---------c--eEEEcCCcCCccHHHHHHHHHHHHhccCCCeeEee---cc----ceEEEee------ccCC-Cc-cc-
Q 044635 650 ---------E--EWETCIPVADCGWKQIAEPVMKLYTETTDGSTIED---KE----TALVWSY------EDAD-PD-FG- 702 (831)
Q Consensus 650 ---------~--~w~~~~~~~~~~w~~~v~~il~~~~e~~~gs~ie~---k~----~~l~~~~------~~~d-~~-~~- 702 (831)
. .+...+ + .+.+.++++...+..+-.+... .+ ..+.... +... .- ++
T Consensus 76 ~~~~~~~~~~~~i~~~~l---~---~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~~~~~ 149 (225)
T TIGR02461 76 PVGAGREVGNYEVIELGK---P---VAKIRAALKEAENEYGLKYYGNSTAEEVEKLTGLPRELAPLAKRREYSETIFLWS 149 (225)
T ss_pred cccccccCCCeEEEEcCC---C---HHHHHHHHHHHHHhcCccchhcCCHHHHHHHHCcCHHHHHHHHhhhcCCcccCCC
Confidence 1 122111 1 2344555543332111111000 00 0000000 0000 00 00
Q ss_pred hHHHHHHHHHHHhHhcCCCeEEEEcCeEEEEEeCCCCHHHHHHHHHHHhhhcCC--CcccEEEEcCCchhHHHHHHcch
Q 044635 703 SCQAKELLDHLESVLANEPVTVKSGQNLVEVKPQGVNKGLVAKRLLSTMQEREM--LPDFVLCVGDDRSDEDMFEVIIS 779 (831)
Q Consensus 703 ~~~a~el~~~L~~~l~~~~v~v~~g~~~vEV~p~gvnKG~al~~Ll~~l~~~g~--~~d~vla~GD~~NDe~Mf~~a~~ 779 (831)
..+..++.+.+ ....+.+..+..++++ ++++|||.|++.+++.+ ++ +...+++|||+.||++||+.++.
T Consensus 150 ~e~~~~~~~~~----~~~~~~~~~s~~~~~i-~~~~sK~~al~~l~~~~---~~~~~~~~~i~~GD~~nD~~ml~~ag~ 220 (225)
T TIGR02461 150 REGWEAILVTA----RARGLKYTHGGRFYTV-HGGSDKGKAIKRLLDLY---KLRPGAIESVGLGDSENDFPMFEVVDL 220 (225)
T ss_pred HHHHHHHHHHH----HHcCCcEEECCEEEEE-CCCCCHHHHHHHHHHHh---ccccCcccEEEEcCCHHHHHHHHhCCC
Confidence 11122333333 2344667777777876 55999999999999987 55 56689999999999999999984
No 55
>PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=99.79 E-value=3e-18 Score=179.72 Aligned_cols=189 Identities=15% Similarity=0.159 Sum_probs=130.0
Q ss_pred ceeEEecCCCccCCCCCCCCCCCHHHHHHHHHHhhcCCCeEEEECCCCHhhHHHHhCCCC-CceEEecCCEEEEeCCCce
Q 044635 573 TRAILLDYDGTLMPQASIDKSPNSKTIDILNSLCRDKNNMVFLVSAKSRKTLAEWFSPCE-NLGIAAEHGYFFRLRRDEE 651 (831)
Q Consensus 573 ~rli~~D~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~~~-~~~liaenGa~i~~~~~~~ 651 (831)
+|+||+|+||||++ ++...++.+.++|++|.+ .|+.|+++|||+...+..+++.+. ..++|++||+.|+.+.+
T Consensus 1 ~KLIftDLDGTLLd---~~~~~~~~a~~aL~~Lk~-~GI~vVlaTGRt~~ev~~l~~~Lgl~~p~I~eNGA~I~~p~~-- 74 (302)
T PRK12702 1 MRLVLSSLDGSLLD---LEFNSYGAARQALAALER-RSIPLVLYSLRTRAQLEHLCRQLRLEHPFICEDGSAIYVPEH-- 74 (302)
T ss_pred CcEEEEeCCCCCcC---CCCcCCHHHHHHHHHHHH-CCCEEEEEcCCCHHHHHHHHHHhCCCCeEEEeCCcEEEEccc--
Confidence 47999999999999 666788999999999987 599999999999999999988773 45899999999998743
Q ss_pred EEEc-C-----CcCCccH-------HHHHHHHHHHHhccCCCeeEe------------------------eccceEEEee
Q 044635 652 WETC-I-----PVADCGW-------KQIAEPVMKLYTETTDGSTIE------------------------DKETALVWSY 694 (831)
Q Consensus 652 w~~~-~-----~~~~~~w-------~~~v~~il~~~~e~~~gs~ie------------------------~k~~~l~~~~ 694 (831)
|... . ...+..| ...++.+++...+.....+.- .++++..+.+
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~lg~~y~~ir~~L~~l~~~~~~~f~gF~d~t~~ei~~~TGL~~~~A~~A~~Re~SEp~~w 154 (302)
T PRK12702 75 YFPAGILDEQWQHRPPYYVCALGLPYPCLRHILQQVRQDSHLDLIGFGDWTASELAAATGIPLEEAERAQKREYSEIFSY 154 (302)
T ss_pred cccccccccccccCCCceEEecCCCHHHHHHHHHHHHHHhCCCceehhhCCHHHHHHHhCcCHHHHHHHHhccCCcceEe
Confidence 2200 0 0011111 234444554433322211111 1122222222
Q ss_pred ccCCCccchHHHHHHHHHHHhHhcCCCeEEEEcCeEEEEEe------------------C---CCCHHHHHHHHHHHhhh
Q 044635 695 EDADPDFGSCQAKELLDHLESVLANEPVTVKSGQNLVEVKP------------------Q---GVNKGLVAKRLLSTMQE 753 (831)
Q Consensus 695 ~~~d~~~~~~~a~el~~~L~~~l~~~~v~v~~g~~~vEV~p------------------~---gvnKG~al~~Ll~~l~~ 753 (831)
... ..++ .+.+...++.+..|..++.++. . +++||.|+++|.+.+..
T Consensus 155 ~~~--------~~~~----~~~~~~~g~~~~~GgRf~H~l~~~~~~~~~~~~~~~~~~~~~~~~~dKg~A~~~L~~~y~~ 222 (302)
T PRK12702 155 SGD--------PARL----REAFAQQEANLTQHLLRLHQLHFSDLPQWYLTGWMQPTLAAEPNSLPGEQAVQLLLDCYQR 222 (302)
T ss_pred cCC--------HHHH----HHHHHHcCCeEEecCceEEecccccccccccccccccccccccCCCCHHHHHHHHHHHHHh
Confidence 211 1112 4445566778889998988886 5 99999999999999854
Q ss_pred cCCCcccEEEEcCCchhHHHHHHcchh
Q 044635 754 REMLPDFVLCVGDDRSDEDMFEVIISS 780 (831)
Q Consensus 754 ~g~~~d~vla~GD~~NDe~Mf~~a~~~ 780 (831)
.. ..=.++++|||.||++|++++...
T Consensus 223 ~~-~~~~tiaLGDspND~~mLe~~D~~ 248 (302)
T PRK12702 223 HL-GPIKALGIGCSPPDLAFLRWSEQK 248 (302)
T ss_pred cc-CCceEEEecCChhhHHHHHhCCee
Confidence 33 233799999999999999999853
No 56
>PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria []. SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B ....
Probab=99.79 E-value=1.2e-19 Score=191.76 Aligned_cols=198 Identities=20% Similarity=0.323 Sum_probs=122.9
Q ss_pred ceeEEecCCCccCCCCCCCCCCCHHHHHHHHHHhhcCCCeEEEECCCCHhhHHHHhCCC---CCceEEecCCEEEEeCCC
Q 044635 573 TRAILLDYDGTLMPQASIDKSPNSKTIDILNSLCRDKNNMVFLVSAKSRKTLAEWFSPC---ENLGIAAEHGYFFRLRRD 649 (831)
Q Consensus 573 ~rli~~D~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~~---~~~~liaenGa~i~~~~~ 649 (831)
++||++|+||||++ .+..-..+..+.++ ....++..++++|||+..++.+.+... .+..+|+.+|+.|+....
T Consensus 2 ~~ll~sDlD~Tl~~---~~~~~~~~l~~~l~-~~~~~~~~~v~~TGRs~~~~~~~~~~~~l~~Pd~~I~svGt~I~~~~~ 77 (247)
T PF05116_consen 2 PRLLASDLDGTLID---GDDEALARLEELLE-QQARPEILFVYVTGRSLESVLRLLREYNLPQPDYIITSVGTEIYYGEN 77 (247)
T ss_dssp SEEEEEETBTTTBH---CHHHHHHHHHHHHH-HHHCCGEEEEEE-SS-HHHHHHHHHHCT-EE-SEEEETTTTEEEESST
T ss_pred CEEEEEECCCCCcC---CCHHHHHHHHHHHH-HhhCCCceEEEECCCCHHHHHHHHHhCCCCCCCEEEecCCeEEEEcCC
Confidence 68999999999993 12222244444444 223568889999999999999888653 357899999999998431
Q ss_pred ----ceEEEcCCcCCccHHH-HHHHHHHHHhccCCCeeEeeccceEEEeeccCCCccchHHHHHHHHHHHhHhcCCC--e
Q 044635 650 ----EEWETCIPVADCGWKQ-IAEPVMKLYTETTDGSTIEDKETALVWSYEDADPDFGSCQAKELLDHLESVLANEP--V 722 (831)
Q Consensus 650 ----~~w~~~~~~~~~~w~~-~v~~il~~~~e~~~gs~ie~k~~~l~~~~~~~d~~~~~~~a~el~~~L~~~l~~~~--v 722 (831)
..|...+ +..|.. .+.+++..+.+-.+....+...+.+.+.+...+. ...++.|++.+...+ +
T Consensus 78 ~~~d~~w~~~i---~~~w~~~~v~~~l~~~~~l~~q~~~~q~~~k~sy~~~~~~~-------~~~~~~i~~~l~~~~l~~ 147 (247)
T PF05116_consen 78 WQPDEEWQAHI---DERWDRERVEEILAELPGLRPQPESEQRPFKISYYVDPDDS-------ADILEEIRARLRQRGLRV 147 (247)
T ss_dssp TEE-HHHHHHH---HTT--HHHHHHHHHCHCCEEEGGCCCGCCTCECEEEETTSH-------CHHHHHHHHHHHCCTCEE
T ss_pred CcChHHHHHHH---HhcCChHHHHHHHHHhhCcccCCccccCCeeEEEEEecccc-------hhHHHHHHHHHHHcCCCe
Confidence 1232222 223433 4445554443211111122233445555443221 123344554444333 3
Q ss_pred E-EEEcCeEEEEEeCCCCHHHHHHHHHHHhhhcCCCcccEEEEcCCchhHHHHHHcchhcCCCCCCCCCceEEEEeCCCC
Q 044635 723 T-VKSGQNLVEVKPQGVNKGLVAKRLLSTMQEREMLPDFVLCVGDDRSDEDMFEVIISSMAGPSIAPRAEVFACTVGRKP 801 (831)
Q Consensus 723 ~-v~~g~~~vEV~p~gvnKG~al~~Ll~~l~~~g~~~d~vla~GD~~NDe~Mf~~a~~~~~~~~~~~~~~~~~v~vG~~~ 801 (831)
. +.++..+++|.|+++|||.|+++|++++ ++++++|+++|||.||++||.... .+|.|||+.
T Consensus 148 ~~i~s~~~~ldilP~~a~K~~Al~~L~~~~---~~~~~~vl~aGDSgND~~mL~~~~--------------~~vvV~Na~ 210 (247)
T PF05116_consen 148 NVIYSNGRDLDILPKGASKGAALRYLMERW---GIPPEQVLVAGDSGNDLEMLEGGD--------------HGVVVGNAQ 210 (247)
T ss_dssp EEEECTCCEEEEEETT-SHHHHHHHHHHHH---T--GGGEEEEESSGGGHHHHCCSS--------------EEEE-TTS-
T ss_pred eEEEccceeEEEccCCCCHHHHHHHHHHHh---CCCHHHEEEEeCCCCcHHHHcCcC--------------CEEEEcCCC
Confidence 3 4468899999999999999999999999 999999999999999999995543 589999863
No 57
>TIGR02149 glgA_Coryne glycogen synthase, Corynebacterium family. This model describes Corynebacterium glutamicum GlgA and closely related proteins in several other species. This enzyme is required for glycogen biosynthesis and appears to replace the distantly related TIGR02095 family of ADP-glucose type glycogen synthase in Corynebacterium glutamicum, Mycobacterium tuberculosis, Bifidobacterium longum, and Streptomyces coelicolor.
Probab=99.79 E-value=3.2e-17 Score=184.57 Aligned_cols=282 Identities=15% Similarity=0.117 Sum_probs=192.1
Q ss_pred CCEEEEeCccccchHHHHHhhcCCCeEEEEEeccCCChHHhh-----cCCChHH-HHHHHhcCCeEeecCHHhHHHHHHH
Q 044635 202 DDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYK-----TLPIREE-ILRALLNSDLIGFHTFDYARHFLSC 275 (831)
Q Consensus 202 ~d~vwvhDyhL~llp~~lr~~~~~~~i~~flH~PfP~~e~f~-----~lp~r~e-il~~ll~~dligf~t~~~~~~Fl~~ 275 (831)
.|+|.+|++...+.+.+++ +..++|+.+.+|..+|...... ....... ....+-.+|.|...+....+.+...
T Consensus 84 ~divh~~~~~~~~~~~~~~-~~~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~~~~~ 162 (388)
T TIGR02149 84 ADVVHSHTWYTFLAGHLAK-KLYDKPLVVTAHSLEPLRPWKEEQLGGGYKLSSWAEKTAIEAADRVIAVSGGMREDILKY 162 (388)
T ss_pred CCeEeecchhhhhHHHHHH-HhcCCCEEEEeecccccccccccccccchhHHHHHHHHHHhhCCEEEEccHHHHHHHHHH
Confidence 4899999988766655544 4557899999998765322110 0000111 1234456788888777666655431
Q ss_pred HHHHhCCeecccCceeeEEEcCEEEEEEEeecccChHHHHHhhCCcchHHHHHHHHHHhc-cCCcEEEEeccCcccccCH
Q 044635 276 CSRMLGLTYESKRGYIGLEYYGRTVSIKILPVGIHMGQLQSVLSLPGTEAKVSELIKQFH-DQGKVMLLGVDDMDIFKGI 354 (831)
Q Consensus 276 ~~r~l~~~~~~~~~~~~~~~~gr~~~i~v~P~GId~~~~~~~~~~~~~~~~~~~lr~~~~-~~~~~iil~VdRld~~KGi 354 (831)
- -+ -...++.++|+|+|...+.+. ....++++++ +.++++|+++||+.+.||+
T Consensus 163 ~---~~---------------~~~~~i~vi~ng~~~~~~~~~--------~~~~~~~~~~~~~~~~~i~~~Grl~~~Kg~ 216 (388)
T TIGR02149 163 Y---PD---------------LDPEKVHVIYNGIDTKEYKPD--------DGNVVLDRYGIDRSRPYILFVGRITRQKGV 216 (388)
T ss_pred c---CC---------------CCcceEEEecCCCChhhcCCC--------chHHHHHHhCCCCCceEEEEEcccccccCH
Confidence 0 01 012467789999999877421 1234566666 5677899999999999999
Q ss_pred HHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhccCCCCCCccEEEecCCCCHHHHHHHHH
Q 044635 355 SLKLLAMEQLLIQHPEWQGKVVLVQIANPARGRGKDVKEVQAETYSTVERINQTFGKPGYDPVVLIDEPLKFYERIAYYV 434 (831)
Q Consensus 355 ~~~l~A~~~lL~~~P~~~~~vvLvqig~p~r~~~~~~~~l~~~i~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~ 434 (831)
..+++|+.++. ++++ |+++|.. ++..++.+++.+.+...+... ..|+++.+.++.+++..+|+
T Consensus 217 ~~li~a~~~l~---~~~~----l~i~g~g-----~~~~~~~~~~~~~~~~~~~~~-----~~v~~~~~~~~~~~~~~~~~ 279 (388)
T TIGR02149 217 PHLLDAVHYIP---KDVQ----VVLCAGA-----PDTPEVAEEVRQAVALLDRNR-----TGIIWINKMLPKEELVELLS 279 (388)
T ss_pred HHHHHHHHHHh---hcCc----EEEEeCC-----CCcHHHHHHHHHHHHHhcccc-----CceEEecCCCCHHHHHHHHH
Confidence 99999999873 3443 7766632 222345556666655543221 24777888899999999999
Q ss_pred HcCEeEECCCccCCCC---CCCC-CceEEEeccccccccc---CCCceeCCCCH------HHHHHHHHHHhcCCHHHHHH
Q 044635 435 VAECCLVTAVRDGSEP---SSPK-KSMLVVSEFIGCSPSL---SGAIRVNPWNI------DAVSDAMDSALEMADQEKQL 501 (831)
Q Consensus 435 ~ADv~vvtS~~eGma~---~~~~-~g~lVlSe~~G~~~~l---~~allVnP~d~------~~~A~ai~~aL~m~~~er~~ 501 (831)
.||++|+||..||++. ++.. +.|+|+|...|..+.+ .+|++++|.|+ ++++++|.++++. ++++..
T Consensus 280 ~aDv~v~ps~~e~~g~~~lEA~a~G~PvI~s~~~~~~e~i~~~~~G~~~~~~~~~~~~~~~~l~~~i~~l~~~-~~~~~~ 358 (388)
T TIGR02149 280 NAEVFVCPSIYEPLGIVNLEAMACGTPVVASATGGIPEVVVDGETGFLVPPDNSDADGFQAELAKAINILLAD-PELAKK 358 (388)
T ss_pred hCCEEEeCCccCCCChHHHHHHHcCCCEEEeCCCCHHHHhhCCCceEEcCCCCCcccchHHHHHHHHHHHHhC-HHHHHH
Confidence 9999999999998821 2222 4578888877777666 35899999998 9999999999874 445555
Q ss_pred HHHHHhhhh-ccCCHHHHHHHHHHHHHH
Q 044635 502 RHEKHYRYV-STHDVGYWARSFLQDLER 528 (831)
Q Consensus 502 r~~~~~~~v-~~~~~~~W~~~~l~~l~~ 528 (831)
..+..++++ .++++..+++++++-+++
T Consensus 359 ~~~~a~~~~~~~~s~~~~~~~~~~~y~~ 386 (388)
T TIGR02149 359 MGIAGRKRAEEEFSWGSIAKKTVEMYRK 386 (388)
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHHh
Confidence 555556655 668999999988877664
No 58
>PLN02871 UDP-sulfoquinovose:DAG sulfoquinovosyltransferase
Probab=99.79 E-value=2e-17 Score=191.55 Aligned_cols=281 Identities=14% Similarity=0.153 Sum_probs=189.2
Q ss_pred HHcCCCCCEEEEeCccccchHHHHHhhcCCCeEEEEEeccCCChHHhhcCCCh-H---HHHHH-HhcCCeEeecCHHhHH
Q 044635 196 EVINPEDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYKTLPIR-E---EILRA-LLNSDLIGFHTFDYAR 270 (831)
Q Consensus 196 ~~~~~~~d~vwvhDyhL~llp~~lr~~~~~~~i~~flH~PfP~~e~f~~lp~r-~---eil~~-ll~~dligf~t~~~~~ 270 (831)
+..+| |+|++|+...+..+.++-.+..++|+.+.+|.-+|..-.....++. + .+.+- .-.+|.|...+....+
T Consensus 141 ~~~kp--DiIh~~~~~~~~~~~~~~ak~~~ip~V~~~h~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ad~ii~~S~~~~~ 218 (465)
T PLN02871 141 ARFKP--DLIHASSPGIMVFGALFYAKLLCVPLVMSYHTHVPVYIPRYTFSWLVKPMWDIIRFLHRAADLTLVTSPALGK 218 (465)
T ss_pred HhCCC--CEEEECCCchhHHHHHHHHHHhCCCEEEEEecCchhhhhcccchhhHHHHHHHHHHHHhhCCEEEECCHHHHH
Confidence 33455 8999998776666665544455788999999765532111111111 0 11111 2247888887776665
Q ss_pred HHHHHHHHHhCCeecccCceeeEEEcCEEEEEEEeecccChHHHHHhhCCcchHHHHHHHHHHhc--cCCcEEEEeccCc
Q 044635 271 HFLSCCSRMLGLTYESKRGYIGLEYYGRTVSIKILPVGIHMGQLQSVLSLPGTEAKVSELIKQFH--DQGKVMLLGVDDM 348 (831)
Q Consensus 271 ~Fl~~~~r~l~~~~~~~~~~~~~~~~gr~~~i~v~P~GId~~~~~~~~~~~~~~~~~~~lr~~~~--~~~~~iil~VdRl 348 (831)
.+... +. ....++.++|+|||.+.|.+.... ..+++++. .+++++|+++||+
T Consensus 219 ~l~~~-----~~--------------~~~~kv~vi~nGvd~~~f~p~~~~-------~~~~~~~~~~~~~~~~i~~vGrl 272 (465)
T PLN02871 219 ELEAA-----GV--------------TAANRIRVWNKGVDSESFHPRFRS-------EEMRARLSGGEPEKPLIVYVGRL 272 (465)
T ss_pred HHHHc-----CC--------------CCcCeEEEeCCccCccccCCcccc-------HHHHHHhcCCCCCCeEEEEeCCC
Confidence 55421 10 012367789999999888532211 23344442 2467899999999
Q ss_pred ccccCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhccCCCCCCccEEEecCCCCHHH
Q 044635 349 DIFKGISLKLLAMEQLLIQHPEWQGKVVLVQIANPARGRGKDVKEVQAETYSTVERINQTFGKPGYDPVVLIDEPLKFYE 428 (831)
Q Consensus 349 d~~KGi~~~l~A~~~lL~~~P~~~~~vvLvqig~p~r~~~~~~~~l~~~i~~lv~~IN~~~g~~~~~pv~~~~~~v~~~e 428 (831)
.+.||+..+++|++++ |+++ |+++| +|+.. +++++++... +|+ |.|.++.+|
T Consensus 273 ~~~K~~~~li~a~~~~----~~~~----l~ivG-----~G~~~----~~l~~~~~~~----------~V~-f~G~v~~~e 324 (465)
T PLN02871 273 GAEKNLDFLKRVMERL----PGAR----LAFVG-----DGPYR----EELEKMFAGT----------PTV-FTGMLQGDE 324 (465)
T ss_pred chhhhHHHHHHHHHhC----CCcE----EEEEe-----CChHH----HHHHHHhccC----------CeE-EeccCCHHH
Confidence 9999999999888654 6554 88888 34443 3444443321 354 567899999
Q ss_pred HHHHHHHcCEeEECCCccCCCC---CCCC-CceEEEecccccccccC------CCceeCCCCHHHHHHHHHHHhcCCHHH
Q 044635 429 RIAYYVVAECCLVTAVRDGSEP---SSPK-KSMLVVSEFIGCSPSLS------GAIRVNPWNIDAVSDAMDSALEMADQE 498 (831)
Q Consensus 429 l~aly~~ADv~vvtS~~eGma~---~~~~-~g~lVlSe~~G~~~~l~------~allVnP~d~~~~A~ai~~aL~m~~~e 498 (831)
+..+|+.||++|+||..|||+. +++. +.|+|+|...|..+.+. +|++++|.|++++|++|.++++. ++.
T Consensus 325 v~~~~~~aDv~V~pS~~E~~g~~vlEAmA~G~PVI~s~~gg~~eiv~~~~~~~~G~lv~~~d~~~la~~i~~ll~~-~~~ 403 (465)
T PLN02871 325 LSQAYASGDVFVMPSESETLGFVVLEAMASGVPVVAARAGGIPDIIPPDQEGKTGFLYTPGDVDDCVEKLETLLAD-PEL 403 (465)
T ss_pred HHHHHHHCCEEEECCcccccCcHHHHHHHcCCCEEEcCCCCcHhhhhcCCCCCceEEeCCCCHHHHHHHHHHHHhC-HHH
Confidence 9999999999999999999821 2222 45777888877766653 48999999999999999999974 455
Q ss_pred HHHHHHHHhhhhccCCHHHHHHHHHHH-HHHHHHHh
Q 044635 499 KQLRHEKHYRYVSTHDVGYWARSFLQD-LERTCREH 533 (831)
Q Consensus 499 r~~r~~~~~~~v~~~~~~~W~~~~l~~-l~~~~~~~ 533 (831)
++...+..++++.++++...++++++. ..++...+
T Consensus 404 ~~~~~~~a~~~~~~fsw~~~a~~l~~~~Y~~~~~~~ 439 (465)
T PLN02871 404 RERMGAAAREEVEKWDWRAATRKLRNEQYSAAIWFW 439 (465)
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHH
Confidence 556666778888899999999999884 55555443
No 59
>cd03796 GT1_PIG-A_like This family is most closely related to the GT1 family of glycosyltransferases. Phosphatidylinositol glycan-class A (PIG-A), an X-linked gene in humans, is necessary for the synthesis of N-acetylglucosaminyl-phosphatidylinositol, a very early intermediate in glycosyl phosphatidylinositol (GPI)-anchor biosynthesis. The GPI-anchor is an important cellular structure that facilitates the attachment of many proteins to cell surfaces. Somatic mutations in PIG-A have been associated with Paroxysmal Nocturnal Hemoglobinuria (PNH), an acquired hematological disorder.
Probab=99.79 E-value=2.5e-17 Score=186.83 Aligned_cols=271 Identities=13% Similarity=0.132 Sum_probs=181.2
Q ss_pred CEEEEeCccccch-HHHHHhhcCCCeEEEEEeccCCChHHhhcCCChHHHHH-HHhcCCeEeecCHHhHHHHHHHHHHHh
Q 044635 203 DFVWVHDYHLMVL-PTFLRKRFNRVKLGFFLHSPFPSSEIYKTLPIREEILR-ALLNSDLIGFHTFDYARHFLSCCSRML 280 (831)
Q Consensus 203 d~vwvhDyhL~ll-p~~lr~~~~~~~i~~flH~PfP~~e~f~~lp~r~eil~-~ll~~dligf~t~~~~~~Fl~~~~r~l 280 (831)
|+|.+|+++..+. ...+-.+..++|+.+..|..|+..+.... +...+.+ .+-.+|.|.+.+....+++....
T Consensus 90 DiIh~~~~~~~~~~~~~~~~~~~~~~~v~t~h~~~~~~~~~~~--~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~~---- 163 (398)
T cd03796 90 TIVHGHQAFSALAHEALLHARTMGLKTVFTDHSLFGFADASSI--HTNKLLRFSLADVDHVICVSHTSKENTVLRA---- 163 (398)
T ss_pred CEEEECCCCchHHHHHHHHhhhcCCcEEEEecccccccchhhH--HhhHHHHHhhccCCEEEEecHhHhhHHHHHh----
Confidence 8999999775543 33343445568999999987653322110 1112222 23467888887776555443210
Q ss_pred CCeecccCceeeEEEcCEEEEEEEeecccChHHHHHhhCCcchHHHHHHHHHHhccCCcEEEEeccCcccccCHHHHHHH
Q 044635 281 GLTYESKRGYIGLEYYGRTVSIKILPVGIHMGQLQSVLSLPGTEAKVSELIKQFHDQGKVMLLGVDDMDIFKGISLKLLA 360 (831)
Q Consensus 281 ~~~~~~~~~~~~~~~~gr~~~i~v~P~GId~~~~~~~~~~~~~~~~~~~lr~~~~~~~~~iil~VdRld~~KGi~~~l~A 360 (831)
+ ....++.++|+|+|.+.|.+... . .- +++++|+++||+.+.||+..+++|
T Consensus 164 ~---------------~~~~k~~vi~ngvd~~~f~~~~~-----~-------~~--~~~~~i~~~grl~~~Kg~~~li~a 214 (398)
T cd03796 164 S---------------LDPERVSVIPNAVDSSDFTPDPS-----K-------RD--NDKITIVVISRLVYRKGIDLLVGI 214 (398)
T ss_pred C---------------CChhhEEEEcCccCHHHcCCCcc-----c-------CC--CCceEEEEEeccchhcCHHHHHHH
Confidence 0 12346778999999988753211 0 11 567899999999999999999999
Q ss_pred HHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhccCCCCCCccEEEecCCCCHHHHHHHHHHcCEeE
Q 044635 361 MEQLLIQHPEWQGKVVLVQIANPARGRGKDVKEVQAETYSTVERINQTFGKPGYDPVVLIDEPLKFYERIAYYVVAECCL 440 (831)
Q Consensus 361 ~~~lL~~~P~~~~~vvLvqig~p~r~~~~~~~~l~~~i~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv~v 440 (831)
+..+.+++|+++ |+++|. ++..++++ +++++. +..+.+.+.|.++.+++..+|+.||+++
T Consensus 215 ~~~l~~~~~~~~----l~i~G~-----g~~~~~l~----~~~~~~-------~l~~~v~~~G~~~~~~~~~~l~~ad~~v 274 (398)
T cd03796 215 IPEICKKHPNVR----FIIGGD-----GPKRILLE----EMREKY-------NLQDRVELLGAVPHERVRDVLVQGHIFL 274 (398)
T ss_pred HHHHHhhCCCEE----EEEEeC-----CchHHHHH----HHHHHh-------CCCCeEEEeCCCCHHHHHHHHHhCCEEE
Confidence 999988888766 888883 34433444 444332 2223344567899999999999999999
Q ss_pred ECCCccCCCC---CCCC-CceEEEeccccccccc-CC-CceeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHhh-hhccC
Q 044635 441 VTAVRDGSEP---SSPK-KSMLVVSEFIGCSPSL-SG-AIRVNPWNIDAVSDAMDSALEMADQEKQLRHEKHYR-YVSTH 513 (831)
Q Consensus 441 vtS~~eGma~---~~~~-~g~lVlSe~~G~~~~l-~~-allVnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~-~v~~~ 513 (831)
+||..||+.. +++. +.|+|+|...|..+.+ .+ +++++| |+++++++|.+++.++.+.+. ..+..++ ...++
T Consensus 275 ~pS~~E~~g~~~~EAma~G~PVI~s~~gg~~e~i~~~~~~~~~~-~~~~l~~~l~~~l~~~~~~~~-~~~~~~~~~~~~f 352 (398)
T cd03796 275 NTSLTEAFCIAIVEAASCGLLVVSTRVGGIPEVLPPDMILLAEP-DVESIVRKLEEAISILRTGKH-DPWSFHNRVKKMY 352 (398)
T ss_pred eCChhhccCHHHHHHHHcCCCEEECCCCCchhheeCCceeecCC-CHHHHHHHHHHHHhChhhhhh-HHHHHHHHHHhhC
Confidence 9999999821 2333 4577777777776666 33 444554 999999999999987654433 3344444 44668
Q ss_pred CHHHHHHHHHHHHHHHH
Q 044635 514 DVGYWARSFLQDLERTC 530 (831)
Q Consensus 514 ~~~~W~~~~l~~l~~~~ 530 (831)
++..-++++++-+++..
T Consensus 353 s~~~~~~~~~~~y~~l~ 369 (398)
T cd03796 353 SWEDVAKRTEKVYDRIL 369 (398)
T ss_pred CHHHHHHHHHHHHHHHh
Confidence 88888888887777654
No 60
>cd03791 GT1_Glycogen_synthase_DULL1_like This family is most closely related to the GT1 family of glycosyltransferases. Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms.
Probab=99.78 E-value=2.9e-17 Score=190.71 Aligned_cols=308 Identities=17% Similarity=0.197 Sum_probs=198.3
Q ss_pred HHHHHHHHHHHHHHHHHcCCCCCEEEEeCccccchHHHHHhhc-----CCCeEEEEEeccCCCh----HHhhcC--CC--
Q 044635 181 QAYVSVNKIFADRIMEVINPEDDFVWVHDYHLMVLPTFLRKRF-----NRVKLGFFLHSPFPSS----EIYKTL--PI-- 247 (831)
Q Consensus 181 ~~Y~~vN~~fa~~i~~~~~~~~d~vwvhDyhL~llp~~lr~~~-----~~~~i~~flH~PfP~~----e~f~~l--p~-- 247 (831)
..|...++...+.+.+. ...-|+|.+||+|-.++|.++++.. .++|+.|..|.+.+.. ..+..+ ++
T Consensus 110 ~~~~~f~~~~~~~l~~~-~~~pDviH~hd~~t~~~~~~l~~~~~~~~~~~~~~v~tiH~~~~~g~~~~~~~~~~~~~~~~ 188 (476)
T cd03791 110 ERFALFSRAALELLRRL-GWKPDIIHCHDWHTGLVPALLKEKYADPFFKNIKTVFTIHNLAYQGVFPLEALEDLGLPWEE 188 (476)
T ss_pred HHHHHHHHHHHHHHHhc-CCCCcEEEECchHHHHHHHHHHHhhccccCCCCCEEEEeCCCCCCCCCCHHHHHHcCCCccc
Confidence 44544555555544432 1224899999999999999998774 5789999999864321 111111 11
Q ss_pred ------------hHHHHHHHhcCCeEeecCHHhHHHHHHHHHHHhCCeecccCceeeEE--EcCEEEEEEEeecccChHH
Q 044635 248 ------------REEILRALLNSDLIGFHTFDYARHFLSCCSRMLGLTYESKRGYIGLE--YYGRTVSIKILPVGIHMGQ 313 (831)
Q Consensus 248 ------------r~eil~~ll~~dligf~t~~~~~~Fl~~~~r~l~~~~~~~~~~~~~~--~~gr~~~i~v~P~GId~~~ 313 (831)
..-+..++..||.|...++.|++..++.- .|. +++ ...+..++.++|+|||.+.
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~ad~v~~vS~~~~~~i~~~~-----------~~~-gl~~~~~~~~~ki~~I~NGid~~~ 256 (476)
T cd03791 189 LFHIDGLEFYGQVNFLKAGIVYADAVTTVSPTYAREILTPE-----------FGE-GLDGLLRARAGKLSGILNGIDYDV 256 (476)
T ss_pred hhhhcccccCCcccHHHHHHHhcCcCeecCHhHHHHhCCCC-----------CCc-chHHHHHhccCCeEEEeCCCcCcc
Confidence 02233456667777777776666544210 000 000 0123457889999999988
Q ss_pred HHHhhCCc-----------chHHHHHHHHHHhc-c--CCcEEEEeccCcccccCHHHHHHHHHHHHHhCCCCCCcEEEEE
Q 044635 314 LQSVLSLP-----------GTEAKVSELIKQFH-D--QGKVMLLGVDDMDIFKGISLKLLAMEQLLIQHPEWQGKVVLVQ 379 (831)
Q Consensus 314 ~~~~~~~~-----------~~~~~~~~lr~~~~-~--~~~~iil~VdRld~~KGi~~~l~A~~~lL~~~P~~~~~vvLvq 379 (831)
|.+..... ........++++++ + .++++|+++||+.+.||++.+++|++++.+++ +.|++
T Consensus 257 ~~p~~~~~~~~~~~~~~~~~~~~~k~~l~~~~g~~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~------~~lvi 330 (476)
T cd03791 257 WNPATDPHLPANYSADDLEGKAENKAALQEELGLPVDPDAPLFGFVGRLTEQKGIDLLLEALPELLELG------GQLVI 330 (476)
T ss_pred cCccccchhhhcCCccccccHHHHHHHHHHHcCCCcCCCCCEEEEEeeccccccHHHHHHHHHHHHHcC------cEEEE
Confidence 86432211 11223456778886 3 57899999999999999999999999987653 44888
Q ss_pred EecCCCCCchhHHHHHHHHHHHHHHHhccCCCCCCccEEEecCCCCHHHHHHHHHHcCEeEECCCccCCC---CCCCC-C
Q 044635 380 IANPARGRGKDVKEVQAETYSTVERINQTFGKPGYDPVVLIDEPLKFYERIAYYVVAECCLVTAVRDGSE---PSSPK-K 455 (831)
Q Consensus 380 ig~p~r~~~~~~~~l~~~i~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv~vvtS~~eGma---~~~~~-~ 455 (831)
+|.. + .++++++.+++.+.. ..++++.+ .+.+++..+|+.||++++||..||++ .+++. +
T Consensus 331 ~G~g-----~--~~~~~~~~~~~~~~~--------~~v~~~~~-~~~~~~~~~~~~aDv~l~pS~~E~~gl~~lEAma~G 394 (476)
T cd03791 331 LGSG-----D--PEYEEALRELAARYP--------GRVAVLIG-YDEALAHLIYAGADFFLMPSRFEPCGLTQMYAMRYG 394 (476)
T ss_pred EecC-----C--HHHHHHHHHHHHhCC--------CcEEEEEe-CCHHHHHHHHHhCCEEECCCCCCCCcHHHHHHhhCC
Confidence 8842 1 234555666655421 13666554 45777889999999999999999882 12222 4
Q ss_pred ceEEEeccccccccc-C--------CCceeCCCCHHHHHHHHHHHhcCCH--HHHHHHHHHHhhhhccCCHHHHHHHHHH
Q 044635 456 SMLVVSEFIGCSPSL-S--------GAIRVNPWNIDAVSDAMDSALEMAD--QEKQLRHEKHYRYVSTHDVGYWARSFLQ 524 (831)
Q Consensus 456 g~lVlSe~~G~~~~l-~--------~allVnP~d~~~~A~ai~~aL~m~~--~er~~r~~~~~~~v~~~~~~~W~~~~l~ 524 (831)
.|+|+|...|..+.+ . +|+++.|.|+++++++|.+++.... +++....++..+ ..+++..-++++++
T Consensus 395 ~pvI~~~~gg~~e~v~~~~~~~~~~~G~~~~~~~~~~l~~~i~~~l~~~~~~~~~~~~~~~~~~--~~fsw~~~a~~~~~ 472 (476)
T cd03791 395 TVPIVRATGGLADTVIDYNEDTGEGTGFVFEGYNADALLAALRRALALYRDPEAWRKLQRNAMA--QDFSWDRSAKEYLE 472 (476)
T ss_pred CCCEECcCCCccceEeCCcCCCCCCCeEEeCCCCHHHHHHHHHHHHHHHcCHHHHHHHHHHHhc--cCCChHHHHHHHHH
Confidence 578888888888777 2 6999999999999999999986432 222222222222 34666666666554
Q ss_pred H
Q 044635 525 D 525 (831)
Q Consensus 525 ~ 525 (831)
-
T Consensus 473 ~ 473 (476)
T cd03791 473 L 473 (476)
T ss_pred H
Confidence 3
No 61
>cd03800 GT1_Sucrose_synthase This family is most closely related to the GT1 family of glycosyltransferases. The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light.
Probab=99.77 E-value=8.4e-17 Score=181.12 Aligned_cols=279 Identities=17% Similarity=0.116 Sum_probs=190.0
Q ss_pred CEEEEeCccccchHHHHHhhcCCCeEEEEEeccCCChHHhhcCCC------hH-HHHHHHhcCCeEeecCHHhHHHHHHH
Q 044635 203 DFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYKTLPI------RE-EILRALLNSDLIGFHTFDYARHFLSC 275 (831)
Q Consensus 203 d~vwvhDyhL~llp~~lr~~~~~~~i~~flH~PfP~~e~f~~lp~------r~-eil~~ll~~dligf~t~~~~~~Fl~~ 275 (831)
|+|.+|.+....++..+.+. .++|+.+..|...+.........+ +. .....+..+|.+.+.+......+...
T Consensus 103 Div~~~~~~~~~~~~~~~~~-~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~s~~~~~~~~~~ 181 (398)
T cd03800 103 DLIHAHYWDSGLVALLLARR-LGIPLVHTFHSLGAVKRRHLGAADTYEPARRIEAEERLLRAADRVIASTPQEAEELYSL 181 (398)
T ss_pred cEEEEecCccchHHHHHHhh-cCCceEEEeecccccCCcccccccccchhhhhhHHHHHHhhCCEEEEcCHHHHHHHHHH
Confidence 89999988777766666544 478899999975532211100000 11 11234557999999888766655431
Q ss_pred HHHHhCCeecccCceeeEEEcCEEEEEEEeecccChHHHHHhhCCcchHHHHHHHHHHhc-cCCcEEEEeccCcccccCH
Q 044635 276 CSRMLGLTYESKRGYIGLEYYGRTVSIKILPVGIHMGQLQSVLSLPGTEAKVSELIKQFH-DQGKVMLLGVDDMDIFKGI 354 (831)
Q Consensus 276 ~~r~l~~~~~~~~~~~~~~~~gr~~~i~v~P~GId~~~~~~~~~~~~~~~~~~~lr~~~~-~~~~~iil~VdRld~~KGi 354 (831)
.+ ....++.++|+|+|.+.+...... ...+++++ ..++.+|+++||+++.||+
T Consensus 182 ----~~---------------~~~~~~~vi~ng~~~~~~~~~~~~-------~~~~~~~~~~~~~~~i~~~gr~~~~k~~ 235 (398)
T cd03800 182 ----YG---------------AYPRRIRVVPPGVDLERFTPYGRA-------EARRARLLRDPDKPRILAVGRLDPRKGI 235 (398)
T ss_pred ----cc---------------ccccccEEECCCCCccceecccch-------hhHHHhhccCCCCcEEEEEcccccccCH
Confidence 00 112247789999998877532211 01133333 4578899999999999999
Q ss_pred HHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhccCCCCCCccEEEecCCCCHHHHHHHHH
Q 044635 355 SLKLLAMEQLLIQHPEWQGKVVLVQIANPARGRGKDVKEVQAETYSTVERINQTFGKPGYDPVVLIDEPLKFYERIAYYV 434 (831)
Q Consensus 355 ~~~l~A~~~lL~~~P~~~~~vvLvqig~p~r~~~~~~~~l~~~i~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~ 434 (831)
..+++|+..+.+++|+++ |+++|...... ......+++.++++.+ ..+-+.+.+.++.+++..+|+
T Consensus 236 ~~ll~a~~~l~~~~~~~~----l~i~G~~~~~~---~~~~~~~~~~~~~~~~-------~~~~v~~~g~~~~~~~~~~~~ 301 (398)
T cd03800 236 DTLIRAYAELPELRERAN----LVIVGGPRDDI---LAMDEEELRELARELG-------VIDRVDFPGRVSREDLPALYR 301 (398)
T ss_pred HHHHHHHHHHHHhCCCeE----EEEEECCCCcc---hhhhhHHHHHHHHhcC-------CCceEEEeccCCHHHHHHHHH
Confidence 999999999988877765 99898543221 1222334455544432 223445678999999999999
Q ss_pred HcCEeEECCCccCCCC---CCC-CCceEEEeccccccccc---CCCceeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHh
Q 044635 435 VAECCLVTAVRDGSEP---SSP-KKSMLVVSEFIGCSPSL---SGAIRVNPWNIDAVSDAMDSALEMADQEKQLRHEKHY 507 (831)
Q Consensus 435 ~ADv~vvtS~~eGma~---~~~-~~g~lVlSe~~G~~~~l---~~allVnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~ 507 (831)
.||++++||..||+.. ++. .+.|+|+|+..|..+.+ ..|++++|.|+++++++|.++++.+ +++....++.+
T Consensus 302 ~adi~l~ps~~e~~~~~l~Ea~a~G~Pvi~s~~~~~~e~i~~~~~g~~~~~~~~~~l~~~i~~l~~~~-~~~~~~~~~a~ 380 (398)
T cd03800 302 AADVFVNPALYEPFGLTALEAMACGLPVVATAVGGPRDIVVDGVTGLLVDPRDPEALAAALRRLLTDP-ALRRRLSRAGL 380 (398)
T ss_pred hCCEEEecccccccCcHHHHHHhcCCCEEECCCCCHHHHccCCCCeEEeCCCCHHHHHHHHHHHHhCH-HHHHHHHHHHH
Confidence 9999999999999831 222 24588888888887777 3589999999999999999999754 45555555666
Q ss_pred hhh-ccCCHHHHHHHHH
Q 044635 508 RYV-STHDVGYWARSFL 523 (831)
Q Consensus 508 ~~v-~~~~~~~W~~~~l 523 (831)
+++ ..+++...+++++
T Consensus 381 ~~~~~~~s~~~~~~~~~ 397 (398)
T cd03800 381 RRARARYTWERVAARLL 397 (398)
T ss_pred HHHHHhCCHHHHHHHHh
Confidence 776 7788888887764
No 62
>cd04951 GT1_WbdM_like This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli. In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have
Probab=99.77 E-value=8.2e-17 Score=178.32 Aligned_cols=278 Identities=17% Similarity=0.184 Sum_probs=187.2
Q ss_pred HHHHcCCCCCEEEEeCccccchHHHHHhhcCCCeEEEEEeccCCChHHhhcCCChHHHHHHH-hcCCeEeecCHHhHHHH
Q 044635 194 IMEVINPEDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYKTLPIREEILRAL-LNSDLIGFHTFDYARHF 272 (831)
Q Consensus 194 i~~~~~~~~d~vwvhDyhL~llp~~lr~~~~~~~i~~flH~PfP~~e~f~~lp~r~eil~~l-l~~dligf~t~~~~~~F 272 (831)
+++..+| |+|++|.+|..++..+++...+..++....|...+..-+ +..+.+.. ..++.+...+....+.|
T Consensus 74 ~~~~~~p--div~~~~~~~~~~~~l~~~~~~~~~~v~~~h~~~~~~~~------~~~~~~~~~~~~~~~~~~s~~~~~~~ 145 (360)
T cd04951 74 ILRQFKP--DVVHAHMFHANIFARLLRLFLPSPPLICTAHSKNEGGRL------RMLAYRLTDFLSDLTTNVSKEALDYF 145 (360)
T ss_pred HHHhcCC--CEEEEcccchHHHHHHHHhhCCCCcEEEEeeccCchhHH------HHHHHHHHhhccCceEEEcHHHHHHH
Confidence 4455666 899999999888888887776777888888854322111 11111111 12444444455444444
Q ss_pred HHHHHHHhCCeecccCceeeEEEcCEEEEEEEeecccChHHHHHhhCCcchHHHHHHHHHHhc-cCCcEEEEeccCcccc
Q 044635 273 LSCCSRMLGLTYESKRGYIGLEYYGRTVSIKILPVGIHMGQLQSVLSLPGTEAKVSELIKQFH-DQGKVMLLGVDDMDIF 351 (831)
Q Consensus 273 l~~~~r~l~~~~~~~~~~~~~~~~gr~~~i~v~P~GId~~~~~~~~~~~~~~~~~~~lr~~~~-~~~~~iil~VdRld~~ 351 (831)
+... .-...++.++|+|+|...|... ......++++++ ..++++++++||+.+.
T Consensus 146 ~~~~-------------------~~~~~~~~~i~ng~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~l~~g~~~~~ 200 (360)
T cd04951 146 IASK-------------------AFNANKSFVVYNGIDTDRFRKD------PARRLKIRNALGVKNDTFVILAVGRLVEA 200 (360)
T ss_pred Hhcc-------------------CCCcccEEEEccccchhhcCcc------hHHHHHHHHHcCcCCCCEEEEEEeeCchh
Confidence 4210 0012367789999998876421 122345667776 5678999999999999
Q ss_pred cCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhccCCCCCCccEEEecCCCCHHHHHH
Q 044635 352 KGISLKLLAMEQLLIQHPEWQGKVVLVQIANPARGRGKDVKEVQAETYSTVERINQTFGKPGYDPVVLIDEPLKFYERIA 431 (831)
Q Consensus 352 KGi~~~l~A~~~lL~~~P~~~~~vvLvqig~p~r~~~~~~~~l~~~i~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~a 431 (831)
||+..+++|+.++.+++|+++ |+++|. ++..++++ +.+.+.+ ..+.+.+.++ .+++..
T Consensus 201 kg~~~li~a~~~l~~~~~~~~----l~i~G~-----g~~~~~~~----~~~~~~~-------~~~~v~~~g~--~~~~~~ 258 (360)
T cd04951 201 KDYPNLLKAFAKLLSDYLDIK----LLIAGD-----GPLRATLE----RLIKALG-------LSNRVKLLGL--RDDIAA 258 (360)
T ss_pred cCcHHHHHHHHHHHhhCCCeE----EEEEcC-----CCcHHHHH----HHHHhcC-------CCCcEEEecc--cccHHH
Confidence 999999999999998888766 888883 33333333 3333322 2233334454 468999
Q ss_pred HHHHcCEeEECCCccCCCC---CCC-CCceEEEeccccccccc-CCCceeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHH
Q 044635 432 YYVVAECCLVTAVRDGSEP---SSP-KKSMLVVSEFIGCSPSL-SGAIRVNPWNIDAVSDAMDSALEMADQEKQLRHEKH 506 (831)
Q Consensus 432 ly~~ADv~vvtS~~eGma~---~~~-~~g~lVlSe~~G~~~~l-~~allVnP~d~~~~A~ai~~aL~m~~~er~~r~~~~ 506 (831)
+|+.||++++||..|||+. ++. .+.|+|+|...|..+.+ .+|..++|.|++++|++|.++++.+++.+..+....
T Consensus 259 ~~~~ad~~v~~s~~e~~~~~~~Ea~a~G~PvI~~~~~~~~e~i~~~g~~~~~~~~~~~~~~i~~ll~~~~~~~~~~~~~~ 338 (360)
T cd04951 259 YYNAADLFVLSSAWEGFGLVVAEAMACELPVVATDAGGVREVVGDSGLIVPISDPEALANKIDEILKMSGEERDIIGARR 338 (360)
T ss_pred HHHhhceEEecccccCCChHHHHHHHcCCCEEEecCCChhhEecCCceEeCCCCHHHHHHHHHHHHhCCHHHHHHHHHHH
Confidence 9999999999999999821 222 24578888877766666 568999999999999999999987777666655553
Q ss_pred hhhhccCCHHHHHHHHHHHH
Q 044635 507 YRYVSTHDVGYWARSFLQDL 526 (831)
Q Consensus 507 ~~~v~~~~~~~W~~~~l~~l 526 (831)
......+++..+++++++-+
T Consensus 339 ~~~~~~~s~~~~~~~~~~~y 358 (360)
T cd04951 339 ERIVKKFSINSIVQQWLTLY 358 (360)
T ss_pred HHHHHhcCHHHHHHHHHHHh
Confidence 34457788888888776543
No 63
>PRK10307 putative glycosyl transferase; Provisional
Probab=99.76 E-value=2.4e-16 Score=179.55 Aligned_cols=280 Identities=17% Similarity=0.135 Sum_probs=185.3
Q ss_pred CCEEEEeCccccchH-HHHHhhcCCCeEEEEEeccCCChHHh-hcCC--Ch----HHHHH-HHhcCCeEeecCHHhHHHH
Q 044635 202 DDFVWVHDYHLMVLP-TFLRKRFNRVKLGFFLHSPFPSSEIY-KTLP--IR----EEILR-ALLNSDLIGFHTFDYARHF 272 (831)
Q Consensus 202 ~d~vwvhDyhL~llp-~~lr~~~~~~~i~~flH~PfP~~e~f-~~lp--~r----~eil~-~ll~~dligf~t~~~~~~F 272 (831)
.|+|++|...+...+ .++-.+..+.++.+..|--||..-.- ...+ .. ..+.+ .+-.+|.|...+....+.+
T Consensus 107 ~Div~~~~p~~~~~~~~~~~~~~~~~~~v~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~S~~~~~~~ 186 (412)
T PRK10307 107 PDRVIGVVPTLFCAPGARLLARLSGARTWLHIQDYEVDAAFGLGLLKGGKVARLATAFERSLLRRFDNVSTISRSMMNKA 186 (412)
T ss_pred CCEEEEeCCcHHHHHHHHHHHHhhCCCEEEEeccCCHHHHHHhCCccCcHHHHHHHHHHHHHHhhCCEEEecCHHHHHHH
Confidence 389999976654332 33333444567777777555432110 0011 00 11111 2335888888887666655
Q ss_pred HHHHHHHhCCeecccCceeeEEEcCEEEEEEEeecccChHHHHHhhCCcchHHHHHHHHHHhc-cCCcEEEEeccCcccc
Q 044635 273 LSCCSRMLGLTYESKRGYIGLEYYGRTVSIKILPVGIHMGQLQSVLSLPGTEAKVSELIKQFH-DQGKVMLLGVDDMDIF 351 (831)
Q Consensus 273 l~~~~r~l~~~~~~~~~~~~~~~~gr~~~i~v~P~GId~~~~~~~~~~~~~~~~~~~lr~~~~-~~~~~iil~VdRld~~ 351 (831)
.+ .+ ....++.++|+|||.+.|.+... .....++++++ +.++++|+++||+.+.
T Consensus 187 ~~-----~~---------------~~~~~i~vi~ngvd~~~~~~~~~-----~~~~~~~~~~~~~~~~~~i~~~G~l~~~ 241 (412)
T PRK10307 187 RE-----KG---------------VAAEKVIFFPNWSEVARFQPVAD-----ADVDALRAQLGLPDGKKIVLYSGNIGEK 241 (412)
T ss_pred HH-----cC---------------CCcccEEEECCCcCHhhcCCCCc-----cchHHHHHHcCCCCCCEEEEEcCccccc
Confidence 32 11 12346788999999988753211 11235677776 5677899999999999
Q ss_pred cCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhccCCCCCCccEEEecCCCCHHHHHH
Q 044635 352 KGISLKLLAMEQLLIQHPEWQGKVVLVQIANPARGRGKDVKEVQAETYSTVERINQTFGKPGYDPVVLIDEPLKFYERIA 431 (831)
Q Consensus 352 KGi~~~l~A~~~lL~~~P~~~~~vvLvqig~p~r~~~~~~~~l~~~i~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~a 431 (831)
||+..+++|++++ +++|+++ |+++| +|+..++ +++++++. +...|+ +.|.++.+++..
T Consensus 242 kg~~~li~a~~~l-~~~~~~~----l~ivG-----~g~~~~~----l~~~~~~~-------~l~~v~-f~G~~~~~~~~~ 299 (412)
T PRK10307 242 QGLELVIDAARRL-RDRPDLI----FVICG-----QGGGKAR----LEKMAQCR-------GLPNVH-FLPLQPYDRLPA 299 (412)
T ss_pred cCHHHHHHHHHHh-ccCCCeE----EEEEC-----CChhHHH----HHHHHHHc-------CCCceE-EeCCCCHHHHHH
Confidence 9999999999876 4556544 88888 3444333 44444432 222455 457899999999
Q ss_pred HHHHcCEeEECCCccCCC--C-----CCCC-CceEEEeccccc--cccc-CCCceeCCCCHHHHHHHHHHHhcCCHHHHH
Q 044635 432 YYVVAECCLVTAVRDGSE--P-----SSPK-KSMLVVSEFIGC--SPSL-SGAIRVNPWNIDAVSDAMDSALEMADQEKQ 500 (831)
Q Consensus 432 ly~~ADv~vvtS~~eGma--~-----~~~~-~g~lVlSe~~G~--~~~l-~~allVnP~d~~~~A~ai~~aL~m~~~er~ 500 (831)
+|+.||++|+||..|++. . +... +.|+|+|...|. .+.+ .+|++++|.|++++|++|.++++++ +++.
T Consensus 300 ~~~~aDi~v~ps~~e~~~~~~p~kl~eama~G~PVi~s~~~g~~~~~~i~~~G~~~~~~d~~~la~~i~~l~~~~-~~~~ 378 (412)
T PRK10307 300 LLKMADCHLLPQKAGAADLVLPSKLTNMLASGRNVVATAEPGTELGQLVEGIGVCVEPESVEALVAAIAALARQA-LLRP 378 (412)
T ss_pred HHHhcCEeEEeeccCcccccCcHHHHHHHHcCCCEEEEeCCCchHHHHHhCCcEEeCCCCHHHHHHHHHHHHhCH-HHHH
Confidence 999999999999988731 0 1122 457777777663 2333 6899999999999999999998754 5555
Q ss_pred HHHHHHhhhhc-cCCHHHHHHHHHHHHHHH
Q 044635 501 LRHEKHYRYVS-THDVGYWARSFLQDLERT 529 (831)
Q Consensus 501 ~r~~~~~~~v~-~~~~~~W~~~~l~~l~~~ 529 (831)
...++.++++. .+++...++++++.+.+.
T Consensus 379 ~~~~~a~~~~~~~fs~~~~~~~~~~~~~~~ 408 (412)
T PRK10307 379 KLGTVAREYAERTLDKENVLRQFIADIRGL 408 (412)
T ss_pred HHHHHHHHHHHHHcCHHHHHHHHHHHHHHH
Confidence 56667777775 689999999998887764
No 64
>TIGR03088 stp2 sugar transferase, PEP-CTERM/EpsH1 system associated. Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.
Probab=99.76 E-value=1.5e-16 Score=178.43 Aligned_cols=205 Identities=12% Similarity=0.124 Sum_probs=146.7
Q ss_pred EEEEEeecccChHHHHHhhCCcchHHHHHHHHHHhccCCcEEEEeccCcccccCHHHHHHHHHHHHHhCCCCCCcEEEEE
Q 044635 300 VSIKILPVGIHMGQLQSVLSLPGTEAKVSELIKQFHDQGKVMLLGVDDMDIFKGISLKLLAMEQLLIQHPEWQGKVVLVQ 379 (831)
Q Consensus 300 ~~i~v~P~GId~~~~~~~~~~~~~~~~~~~lr~~~~~~~~~iil~VdRld~~KGi~~~l~A~~~lL~~~P~~~~~vvLvq 379 (831)
.++.++|+|||.+.|.+... ......++.+...++.+|+++||+++.||+..+++|+..+++++|+...++.|++
T Consensus 160 ~~~~vi~ngvd~~~~~~~~~-----~~~~~~~~~~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~~~~~~~l~i 234 (374)
T TIGR03088 160 AKIHQIYNGVDTERFHPSRG-----DRSPILPPDFFADESVVVGTVGRLQAVKDQPTLVRAFALLVRQLPEGAERLRLVI 234 (374)
T ss_pred hhEEEeccCccccccCCCcc-----chhhhhHhhcCCCCCeEEEEEecCCcccCHHHHHHHHHHHHHhCcccccceEEEE
Confidence 45678999999987753211 1111122223245688999999999999999999999999999987666788999
Q ss_pred EecCCCCCchhHHHHHHHHHHHHHHHhccCCCCCCccEEEecCCCCHHHHHHHHHHcCEeEECCCccCCC---CCCCC-C
Q 044635 380 IANPARGRGKDVKEVQAETYSTVERINQTFGKPGYDPVVLIDEPLKFYERIAYYVVAECCLVTAVRDGSE---PSSPK-K 455 (831)
Q Consensus 380 ig~p~r~~~~~~~~l~~~i~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv~vvtS~~eGma---~~~~~-~ 455 (831)
+|. |+..+++ ++.+.+. +....+++.|. .+++..+|+.||++|+||..||+. .+++. +
T Consensus 235 ~G~-----g~~~~~~----~~~~~~~-------~~~~~v~~~g~--~~~~~~~~~~adi~v~pS~~Eg~~~~~lEAma~G 296 (374)
T TIGR03088 235 VGD-----GPARGAC----EQMVRAA-------GLAHLVWLPGE--RDDVPALMQALDLFVLPSLAEGISNTILEAMASG 296 (374)
T ss_pred ecC-----CchHHHH----HHHHHHc-------CCcceEEEcCC--cCCHHHHHHhcCEEEeccccccCchHHHHHHHcC
Confidence 983 3333333 3443332 23345666664 568999999999999999999982 12222 4
Q ss_pred ceEEEeccccccccc---CCCceeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHhhhh-ccCCHHHHHHHHHHHHHH
Q 044635 456 SMLVVSEFIGCSPSL---SGAIRVNPWNIDAVSDAMDSALEMADQEKQLRHEKHYRYV-STHDVGYWARSFLQDLER 528 (831)
Q Consensus 456 g~lVlSe~~G~~~~l---~~allVnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v-~~~~~~~W~~~~l~~l~~ 528 (831)
.|+|+|..+|..+.+ .+|++++|.|++++|++|.++++. ++++....++.++++ ..+++...++++.+-+.+
T Consensus 297 ~Pvv~s~~~g~~e~i~~~~~g~~~~~~d~~~la~~i~~l~~~-~~~~~~~~~~a~~~~~~~fs~~~~~~~~~~~y~~ 372 (374)
T TIGR03088 297 LPVIATAVGGNPELVQHGVTGALVPPGDAVALARALQPYVSD-PAARRAHGAAGRARAEQQFSINAMVAAYAGLYDQ 372 (374)
T ss_pred CCEEEcCCCCcHHHhcCCCceEEeCCCCHHHHHHHHHHHHhC-HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 577777877777766 358999999999999999999874 445555566677776 578888888877665543
No 65
>TIGR02470 sucr_synth sucrose synthase. This model represents sucrose synthase, an enzyme that, despite its name, generally uses rather produces sucrose. Sucrose plus UDP (or ADP) becomes D-fructose plus UDP-glucose (or ADP-glucose), which is then available for cell wall (or starch) biosynthesis. The enzyme is homologous to sucrose phosphate synthase, which catalyzes the penultimate step in sucrose synthesis. Sucrose synthase is found, so far, exclusively in plants and cyanobacteria.
Probab=99.75 E-value=5.8e-16 Score=183.79 Aligned_cols=336 Identities=11% Similarity=0.105 Sum_probs=196.9
Q ss_pred hhHHHHHHHHHHHHHHHHHHcCCCCCEEEEeCccccchHHHHHhhcCCCeEEEEEeccCC----ChHHh-hcCC------
Q 044635 178 SLWQAYVSVNKIFADRIMEVINPEDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFP----SSEIY-KTLP------ 246 (831)
Q Consensus 178 ~~w~~Y~~vN~~fa~~i~~~~~~~~d~vwvhDyhL~llp~~lr~~~~~~~i~~flH~PfP----~~e~f-~~lp------ 246 (831)
+.|.....++...++.+........|+|..|.+.=-++...+.++. +++..+..|+.=. .+..+ ....
T Consensus 362 ~l~p~l~~f~~~~~~~~~~~~~~~pDlIHahy~d~glva~lla~~l-gVP~v~t~HsL~~~K~~~~g~~~~~~e~~~~~~ 440 (784)
T TIGR02470 362 EIWPYLETFAEDAEKEILAELQGKPDLIIGNYSDGNLVASLLARKL-GVTQCTIAHALEKTKYPDSDIYWQEFEDKYHFS 440 (784)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCCEEEECCCchHHHHHHHHHhc-CCCEEEECCcchhhcccccccccccchhHHHhh
Confidence 4566666666666666654443223899998766556776776655 6888888885411 11100 0010
Q ss_pred Ch-HHHHHHHhcCCeEeecCHHhHHHHHHHHHHHhCCee-cccCceeeEEEcC---EEEEEEEeecccChHHHHHhhCCc
Q 044635 247 IR-EEILRALLNSDLIGFHTFDYARHFLSCCSRMLGLTY-ESKRGYIGLEYYG---RTVSIKILPVGIHMGQLQSVLSLP 321 (831)
Q Consensus 247 ~r-~eil~~ll~~dligf~t~~~~~~Fl~~~~r~l~~~~-~~~~~~~~~~~~g---r~~~i~v~P~GId~~~~~~~~~~~ 321 (831)
.+ +.=+..|-.||.|.-.|++-...-.+.+.. .+... -...+...+ .+| ...++.++|+|+|+..|.+.....
T Consensus 441 ~r~~ae~~~~~~AD~IItsT~qEi~~~~~~v~q-Y~s~~~ft~p~Ly~v-vnGid~~~~Ki~VVpPGVD~~iF~P~~~~~ 518 (784)
T TIGR02470 441 CQFTADLIAMNAADFIITSTYQEIAGTKDSVGQ-YESHQAFTMPGLYRV-VHGIDVFDPKFNIVSPGADESIYFPYSDKE 518 (784)
T ss_pred hhhhHHHHHHhcCCEEEECcHHHhhhhhhhhhh-hhhcccccccceeee-ecCccCCcCCeEEECCCcChhhcCCCCchh
Confidence 01 001256667999987775332211111100 00000 000011111 111 123788999999999886432211
Q ss_pred ch-HHHH----------HHHHHHhc---cCCcEEEEeccCcccccCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCC-
Q 044635 322 GT-EAKV----------SELIKQFH---DQGKVMLLGVDDMDIFKGISLKLLAMEQLLIQHPEWQGKVVLVQIANPARG- 386 (831)
Q Consensus 322 ~~-~~~~----------~~lr~~~~---~~~~~iil~VdRld~~KGi~~~l~A~~~lL~~~P~~~~~vvLvqig~p~r~- 386 (831)
.. .... ...++.+| .+++++|++|||+++.||+..+++||.++.+..+ .+.||+||.+...
T Consensus 519 ~r~~~~~~~ie~ll~~~~~~~~~~G~l~d~~kpiIl~VGRL~~~KGid~LIeA~~~l~~l~~----~~~LVIVGGg~~~~ 594 (784)
T TIGR02470 519 KRLTNLHPEIEELLFSLEDNDEHYGYLKDPNKPIIFSMARLDRVKNLTGLVECYGRSPKLRE----LVNLVVVAGKLDAK 594 (784)
T ss_pred hhhhhhhcchhhhccchhhHHHHhCCCCCCCCcEEEEEeCCCccCCHHHHHHHHHHhHhhCC----CeEEEEEeCCcccc
Confidence 00 0000 12234554 3578999999999999999999999987644333 4558989864321
Q ss_pred --CchhHHHHHHHHHHHHHHHhccCCCCCCccEEEecCCCCHHHHHHHHH-H---cCEeEECCCccCCC---CCCCC-Cc
Q 044635 387 --RGKDVKEVQAETYSTVERINQTFGKPGYDPVVLIDEPLKFYERIAYYV-V---AECCLVTAVRDGSE---PSSPK-KS 456 (831)
Q Consensus 387 --~~~~~~~l~~~i~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~-~---ADv~vvtS~~eGma---~~~~~-~g 456 (831)
...+..+..+++.+++.+.+ -.+ .|.++....+..++..+|+ + +||||+||.+|||+ .+++. +.
T Consensus 595 ~s~d~ee~~~i~~L~~la~~~g----L~g--~V~flG~~~~~~~~~elyr~iAd~adVfV~PS~~EpFGLvvLEAMAcGl 668 (784)
T TIGR02470 595 ESKDREEQAEIEKMHNLIDQYQ----LHG--QIRWIGAQLNRVRNGELYRYIADTKGIFVQPALYEAFGLTVLEAMTCGL 668 (784)
T ss_pred cccchhHHHHHHHHHHHHHHhC----CCC--eEEEccCcCCcccHHHHHHHhhccCcEEEECCcccCCCHHHHHHHHcCC
Confidence 11122223455666665533 222 3554432345666667776 2 46999999999982 13333 45
Q ss_pred eEEEeccccccccc---CCCceeCCCCHHHHHHHHHHHhc---CCHHHHHHHHHHHhhhh-ccCCHHHHHHHHHHHH
Q 044635 457 MLVVSEFIGCSPSL---SGAIRVNPWNIDAVSDAMDSALE---MADQEKQLRHEKHYRYV-STHDVGYWARSFLQDL 526 (831)
Q Consensus 457 ~lVlSe~~G~~~~l---~~allVnP~d~~~~A~ai~~aL~---m~~~er~~r~~~~~~~v-~~~~~~~W~~~~l~~l 526 (831)
|+|+|..+|..+.+ .+|++|+|.|++++|++|.++++ ..++.+....+..++++ +.+++...+++++.-+
T Consensus 669 PVVAT~~GG~~EiV~dg~tGfLVdp~D~eaLA~aL~~ll~kll~dp~~~~~ms~~a~~rV~~~FSW~~~A~~ll~l~ 745 (784)
T TIGR02470 669 PTFATRFGGPLEIIQDGVSGFHIDPYHGEEAAEKIVDFFEKCDEDPSYWQKISQGGLQRIYEKYTWKIYSERLLTLA 745 (784)
T ss_pred CEEEcCCCCHHHHhcCCCcEEEeCCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 88888888888877 36899999999999999999874 24445555555666666 6688888888776544
No 66
>cd05844 GT1_like_7 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center
Probab=99.74 E-value=3.4e-16 Score=174.45 Aligned_cols=270 Identities=17% Similarity=0.100 Sum_probs=179.4
Q ss_pred HHHHcCCCCCEEEEeCccccchHHHHHhhcCCCeEEEEEeccC----CChHHhhcCCChHHHHH-HHhcCCeEeecCHHh
Q 044635 194 IMEVINPEDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPF----PSSEIYKTLPIREEILR-ALLNSDLIGFHTFDY 268 (831)
Q Consensus 194 i~~~~~~~~d~vwvhDyhL~llp~~lr~~~~~~~i~~flH~Pf----P~~e~f~~lp~r~eil~-~ll~~dligf~t~~~ 268 (831)
+.+..+| |+|++|+.+..+....+. +..++|+.+.+|.-. +.............+.+ .+-.+|.|-+.+...
T Consensus 77 ~~~~~~~--dvvh~~~~~~~~~~~~~~-~~~~~p~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~s~~~ 153 (367)
T cd05844 77 LLRRHRP--DLVHAHFGFDGVYALPLA-RRLGVPLVVTFHGFDATTSLALLLRSRWALYARRRRRLARRAALFIAVSQFI 153 (367)
T ss_pred HHHhhCC--CEEEeccCchHHHHHHHH-HHcCCCEEEEEeCccccccchhhcccchhHHHHHHHHHHHhcCEEEECCHHH
Confidence 4455566 899999766444333333 334688888888421 11111111001122222 234578888887655
Q ss_pred HHHHHHHHHHHhCCeecccCceeeEEEcCEEEEEEEeecccChHHHHHhhCCcchHHHHHHHHHHhccCCcEEEEeccCc
Q 044635 269 ARHFLSCCSRMLGLTYESKRGYIGLEYYGRTVSIKILPVGIHMGQLQSVLSLPGTEAKVSELIKQFHDQGKVMLLGVDDM 348 (831)
Q Consensus 269 ~~~Fl~~~~r~l~~~~~~~~~~~~~~~~gr~~~i~v~P~GId~~~~~~~~~~~~~~~~~~~lr~~~~~~~~~iil~VdRl 348 (831)
.+.+... | ....++.++|+|+|.+.+.+.. . ..+++.++++||+
T Consensus 154 ~~~~~~~-----~---------------~~~~~i~vi~~g~d~~~~~~~~--------------~--~~~~~~i~~~G~~ 197 (367)
T cd05844 154 RDRLLAL-----G---------------FPPEKVHVHPIGVDTAKFTPAT--------------P--ARRPPRILFVGRF 197 (367)
T ss_pred HHHHHHc-----C---------------CCHHHeEEecCCCCHHhcCCCC--------------C--CCCCcEEEEEEee
Confidence 5544421 1 1223567899999987764210 0 1456789999999
Q ss_pred ccccCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhccCCCCCCccEEEecCCCCHHH
Q 044635 349 DIFKGISLKLLAMEQLLIQHPEWQGKVVLVQIANPARGRGKDVKEVQAETYSTVERINQTFGKPGYDPVVLIDEPLKFYE 428 (831)
Q Consensus 349 d~~KGi~~~l~A~~~lL~~~P~~~~~vvLvqig~p~r~~~~~~~~l~~~i~~lv~~IN~~~g~~~~~pv~~~~~~v~~~e 428 (831)
.+.||+..+++|+..+.+++|+++ |+++|. ++. .++++.++++. ++.+.+.+.+.++.++
T Consensus 198 ~~~K~~~~li~a~~~l~~~~~~~~----l~ivG~-----g~~----~~~~~~~~~~~-------~~~~~v~~~g~~~~~~ 257 (367)
T cd05844 198 VEKKGPLLLLEAFARLARRVPEVR----LVIIGD-----GPL----LAALEALARAL-------GLGGRVTFLGAQPHAE 257 (367)
T ss_pred ccccChHHHHHHHHHHHHhCCCeE----EEEEeC-----chH----HHHHHHHHHHc-------CCCCeEEECCCCCHHH
Confidence 999999999999999998888765 888883 333 23444444442 1223455677899999
Q ss_pred HHHHHHHcCEeEECCC------ccCCCC---CCC-CCceEEEeccccccccc---CCCceeCCCCHHHHHHHHHHHhcCC
Q 044635 429 RIAYYVVAECCLVTAV------RDGSEP---SSP-KKSMLVVSEFIGCSPSL---SGAIRVNPWNIDAVSDAMDSALEMA 495 (831)
Q Consensus 429 l~aly~~ADv~vvtS~------~eGma~---~~~-~~g~lVlSe~~G~~~~l---~~allVnP~d~~~~A~ai~~aL~m~ 495 (831)
+..+|+.||++++||. .||+.. ++. .+.|+|+|...|..+.+ .+|++++|.|+++++++|.++++.+
T Consensus 258 l~~~~~~ad~~v~ps~~~~~~~~E~~~~~~~EA~a~G~PvI~s~~~~~~e~i~~~~~g~~~~~~d~~~l~~~i~~l~~~~ 337 (367)
T cd05844 258 VRELMRRARIFLQPSVTAPSGDAEGLPVVLLEAQASGVPVVATRHGGIPEAVEDGETGLLVPEGDVAALAAALGRLLADP 337 (367)
T ss_pred HHHHHHhCCEEEECcccCCCCCccCCchHHHHHHHcCCCEEEeCCCCchhheecCCeeEEECCCCHHHHHHHHHHHHcCH
Confidence 9999999999999997 477721 121 25688888888877766 4689999999999999999998743
Q ss_pred HHHHHHHHHHHhhhh-ccCCHHHHHHHHH
Q 044635 496 DQEKQLRHEKHYRYV-STHDVGYWARSFL 523 (831)
Q Consensus 496 ~~er~~r~~~~~~~v-~~~~~~~W~~~~l 523 (831)
+.+.....+.++++ ..+++..+++++.
T Consensus 338 -~~~~~~~~~a~~~~~~~~s~~~~~~~l~ 365 (367)
T cd05844 338 -DLRARMGAAGRRRVEERFDLRRQTAKLE 365 (367)
T ss_pred -HHHHHHHHHHHHHHHHHCCHHHHHHHHh
Confidence 44555556667766 5688888887664
No 67
>PLN00142 sucrose synthase
Probab=99.74 E-value=5.5e-16 Score=183.93 Aligned_cols=331 Identities=13% Similarity=0.116 Sum_probs=194.6
Q ss_pred hhhHHHHHHHHHHHHHHHHHHcCCCCCEEEEeCccccchHHHHHhhcCCCeEEEEEecc-----------CCCh-HHhhc
Q 044635 177 RSLWQAYVSVNKIFADRIMEVINPEDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSP-----------FPSS-EIYKT 244 (831)
Q Consensus 177 ~~~w~~Y~~vN~~fa~~i~~~~~~~~d~vwvhDyhL~llp~~lr~~~~~~~i~~flH~P-----------fP~~-e~f~~ 244 (831)
.+.|..-.+++...++.+........|+|.-|.+.=-++...|++++ ++|..+..|+- |... +-|+.
T Consensus 384 e~l~p~L~~f~~~~~~~~~~~~~~~PDlIHaHYwdsg~vA~~La~~l-gVP~v~T~HsL~k~K~~~~~~~~~~~e~~y~~ 462 (815)
T PLN00142 384 FDVWPYLETFAEDAASEILAELQGKPDLIIGNYSDGNLVASLLAHKL-GVTQCTIAHALEKTKYPDSDIYWKKFDDKYHF 462 (815)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCCCEEEECCccHHHHHHHHHHHh-CCCEEEEcccchhhhccccCCcccccchhhhh
Confidence 45677777777777776654443123899999555556666776665 78999999942 2111 11111
Q ss_pred -CCChHHHHHHHhcCCeEeecCHHhHHHHHHHHHHHhCCeecccCc---------eeeEEEcCEEEEEEEeecccChHHH
Q 044635 245 -LPIREEILRALLNSDLIGFHTFDYARHFLSCCSRMLGLTYESKRG---------YIGLEYYGRTVSIKILPVGIHMGQL 314 (831)
Q Consensus 245 -lp~r~eil~~ll~~dligf~t~~~~~~Fl~~~~r~l~~~~~~~~~---------~~~~~~~gr~~~i~v~P~GId~~~~ 314 (831)
+-...|. ..|-.||.|.-.|+.-....-..+. .|.+..+ ..+++++ .-++.++|+|+|...|
T Consensus 463 ~~r~~aE~-~a~~~Ad~IIasT~qEi~g~~~~i~-----qy~sh~~f~~p~L~rvv~GId~~--~~ki~VVppGvD~~~F 534 (815)
T PLN00142 463 SCQFTADL-IAMNHADFIITSTYQEIAGSKDTVG-----QYESHTAFTLPGLYRVVHGIDVF--DPKFNIVSPGADMSIY 534 (815)
T ss_pred hhchHHHH-HHHHhhhHHHhCcHHHHhcccchhh-----hhhcccccccchhhhhhcccccc--ccCeeEECCCCChhhc
Confidence 0111122 2555677666554332211000000 0000000 0011111 2278889999999988
Q ss_pred HHhhCCc--------chHHH---HHHHHHHhc---cCCcEEEEeccCcccccCHHHHHHHHHHHHHhCCCCCCcEEEEEE
Q 044635 315 QSVLSLP--------GTEAK---VSELIKQFH---DQGKVMLLGVDDMDIFKGISLKLLAMEQLLIQHPEWQGKVVLVQI 380 (831)
Q Consensus 315 ~~~~~~~--------~~~~~---~~~lr~~~~---~~~~~iil~VdRld~~KGi~~~l~A~~~lL~~~P~~~~~vvLvqi 380 (831)
.+..... ..... ....++.++ ..++++|++|||+++.||+..+++||.++.+..+++ .|++|
T Consensus 535 ~P~~~~~~rl~~l~n~I~~~l~~~~~~~e~lg~l~~~~kpvIl~VGRL~~~KGid~LIeA~a~l~~l~~~~----~LVIV 610 (815)
T PLN00142 535 FPYTEKQKRLTSLHPSIEELLYSPEQNDEHIGYLKDRKKPIIFSMARLDRVKNLTGLVEWYGKNKRLRELV----NLVVV 610 (815)
T ss_pred CCCChHHhhHHhhcccchhhcCChHHHHHHhCCccCCCCcEEEEEecCcccCCHHHHHHHHHHHHHhCCCc----EEEEE
Confidence 6321100 00000 001123333 245789999999999999999999999886665554 49989
Q ss_pred ecCC-CCCchhHH--HHHHHHHHHHHHHhccCCCCCCccEEEec---CCCCHHHHHHHHH-HcCEeEECCCccCCC---C
Q 044635 381 ANPA-RGRGKDVK--EVQAETYSTVERINQTFGKPGYDPVVLID---EPLKFYERIAYYV-VAECCLVTAVRDGSE---P 450 (831)
Q Consensus 381 g~p~-r~~~~~~~--~l~~~i~~lv~~IN~~~g~~~~~pv~~~~---~~v~~~el~aly~-~ADv~vvtS~~eGma---~ 450 (831)
|.+. .....+.+ +..+++.+++.+.+ ..+ .|.++. +..+..+++.+|+ ++|+||+||.+|||. .
T Consensus 611 Ggg~d~~~s~d~ee~~el~~L~~La~~lg----L~~--~V~flG~~~~~~~~~eLyr~iadaaDVfVlPS~~EgFGLvvL 684 (815)
T PLN00142 611 GGFIDPSKSKDREEIAEIKKMHSLIEKYN----LKG--QFRWIAAQTNRVRNGELYRYIADTKGAFVQPALYEAFGLTVV 684 (815)
T ss_pred ECCccccccccHHHHHHHHHHHHHHHHcC----CCC--cEEEcCCcCCcccHHHHHHHHHhhCCEEEeCCcccCCCHHHH
Confidence 8541 11111111 12244555555533 222 255443 2455678888777 579999999999982 1
Q ss_pred CCCC-CceEEEeccccccccc---CCCceeCCCCHHHHHHHHHHHhc---CCHHHHHHHHHHHhhhh-ccCCHHHHHHHH
Q 044635 451 SSPK-KSMLVVSEFIGCSPSL---SGAIRVNPWNIDAVSDAMDSALE---MADQEKQLRHEKHYRYV-STHDVGYWARSF 522 (831)
Q Consensus 451 ~~~~-~g~lVlSe~~G~~~~l---~~allVnP~d~~~~A~ai~~aL~---m~~~er~~r~~~~~~~v-~~~~~~~W~~~~ 522 (831)
+++. +.|+|+|..+|..+.+ .+|++|+|.|++++|++|.++|. .+++.+....+..++.+ +.+++...++++
T Consensus 685 EAMA~GlPVVATdvGG~~EIV~dG~tG~LV~P~D~eaLA~aI~~lLekLl~Dp~lr~~mg~~Ar~rv~e~FSWe~~A~rl 764 (815)
T PLN00142 685 EAMTCGLPTFATCQGGPAEIIVDGVSGFHIDPYHGDEAANKIADFFEKCKEDPSYWNKISDAGLQRIYECYTWKIYAERL 764 (815)
T ss_pred HHHHcCCCEEEcCCCCHHHHhcCCCcEEEeCCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHH
Confidence 3333 4588888888888777 36899999999999999987753 34555555566667776 668888888877
Q ss_pred HHHH
Q 044635 523 LQDL 526 (831)
Q Consensus 523 l~~l 526 (831)
++-.
T Consensus 765 l~L~ 768 (815)
T PLN00142 765 LTLG 768 (815)
T ss_pred HHHH
Confidence 7643
No 68
>cd03819 GT1_WavL_like This family is most closely related to the GT1 family of glycosyltransferases. WavL in Vibrio cholerae has been shown to be involved in the biosynthesis of the lipopolysaccharide core.
Probab=99.73 E-value=4.4e-16 Score=172.51 Aligned_cols=266 Identities=15% Similarity=0.186 Sum_probs=181.4
Q ss_pred HHcCCCCCEEEEeCccccchHHHHHhhcCCCeEEEEEeccCCChHHhhcCCChHHHHHHHhcCCeEeecCHHhHHHHHHH
Q 044635 196 EVINPEDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYKTLPIREEILRALLNSDLIGFHTFDYARHFLSC 275 (831)
Q Consensus 196 ~~~~~~~d~vwvhDyhL~llp~~lr~~~~~~~i~~flH~PfP~~e~f~~lp~r~eil~~ll~~dligf~t~~~~~~Fl~~ 275 (831)
+..++ |+|.+|..+...+..++.+ ..++|+.+.+|-.++.... ...+ +..+|.+.+.+....+.+..
T Consensus 75 ~~~~~--dii~~~~~~~~~~~~~~~~-~~~~~~i~~~h~~~~~~~~------~~~~---~~~~~~vi~~s~~~~~~~~~- 141 (355)
T cd03819 75 REEKV--DIVHARSRAPAWSAYLAAR-RTRPPFVTTVHGFYSVNFR------YNAI---MARGDRVIAVSNFIADHIRE- 141 (355)
T ss_pred HHcCC--CEEEECCCchhHHHHHHHH-hcCCCEEEEeCCchhhHHH------HHHH---HHhcCEEEEeCHHHHHHHHH-
Confidence 33454 8999998776555554443 3478999999976654431 2222 34588888777655544431
Q ss_pred HHHHhCCeecccCceeeEEEcCEEEEEEEeecccChHHHHHhhCCcchHHHHHHHHHHhc-cCCcEEEEeccCcccccCH
Q 044635 276 CSRMLGLTYESKRGYIGLEYYGRTVSIKILPVGIHMGQLQSVLSLPGTEAKVSELIKQFH-DQGKVMLLGVDDMDIFKGI 354 (831)
Q Consensus 276 ~~r~l~~~~~~~~~~~~~~~~gr~~~i~v~P~GId~~~~~~~~~~~~~~~~~~~lr~~~~-~~~~~iil~VdRld~~KGi 354 (831)
..+. ...++.++|+|+|...|...... ......++++++ ..++++++++||+.+.||+
T Consensus 142 ---~~~~---------------~~~k~~~i~ngi~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~i~~~Gr~~~~Kg~ 200 (355)
T cd03819 142 ---NYGV---------------DPDRIRVIPRGVDLDRFDPGAVP---PERILALAREWPLPKGKPVILLPGRLTRWKGQ 200 (355)
T ss_pred ---hcCC---------------ChhhEEEecCCccccccCccccc---hHHHHHHHHHcCCCCCceEEEEeeccccccCH
Confidence 1111 22467789999999887532221 122233666765 5678899999999999999
Q ss_pred HHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhccCCCCCCccEEEecCCCCHHHHHHHHH
Q 044635 355 SLKLLAMEQLLIQHPEWQGKVVLVQIANPARGRGKDVKEVQAETYSTVERINQTFGKPGYDPVVLIDEPLKFYERIAYYV 434 (831)
Q Consensus 355 ~~~l~A~~~lL~~~P~~~~~vvLvqig~p~r~~~~~~~~l~~~i~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~ 434 (831)
..+++|+..+.+++++++ |+++|... ..+.+.+++.+.+.+.+ ..+-+.+.+. .+++..+|+
T Consensus 201 ~~li~~~~~l~~~~~~~~----l~ivG~~~-----~~~~~~~~~~~~~~~~~-------~~~~v~~~g~--~~~~~~~l~ 262 (355)
T cd03819 201 EVFIEALARLKKDDPDVH----LLIVGDAQ-----GRRFYYAELLELIKRLG-------LQDRVTFVGH--CSDMPAAYA 262 (355)
T ss_pred HHHHHHHHHHHhcCCCeE----EEEEECCc-----ccchHHHHHHHHHHHcC-------CcceEEEcCC--cccHHHHHH
Confidence 999999999988767655 88888432 22344455554444422 2122334444 678999999
Q ss_pred HcCEeEECC-CccCCCC---CCCC-CceEEEeccccccccc---CCCceeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHH
Q 044635 435 VAECCLVTA-VRDGSEP---SSPK-KSMLVVSEFIGCSPSL---SGAIRVNPWNIDAVSDAMDSALEMADQEKQLRHEKH 506 (831)
Q Consensus 435 ~ADv~vvtS-~~eGma~---~~~~-~g~lVlSe~~G~~~~l---~~allVnP~d~~~~A~ai~~aL~m~~~er~~r~~~~ 506 (831)
.||++++|| ..||+.. ++.. +.|+|++...|..+.+ .+|++++|.|+++++++|..++..+++++....++.
T Consensus 263 ~ad~~i~ps~~~e~~~~~l~EA~a~G~PvI~~~~~~~~e~i~~~~~g~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~a 342 (355)
T cd03819 263 LADIVVSASTEPEAFGRTAVEAQAMGRPVIASDHGGARETVRPGETGLLVPPGDAEALAQALDQILSLLPEGRAKMFAKA 342 (355)
T ss_pred hCCEEEecCCCCCCCchHHHHHHhcCCCEEEcCCCCcHHHHhCCCceEEeCCCCHHHHHHHHHHHHhhCHHHHHHHHHHH
Confidence 999999999 7888821 2222 4577888776666656 258999999999999999988887888887777777
Q ss_pred hhhhccC
Q 044635 507 YRYVSTH 513 (831)
Q Consensus 507 ~~~v~~~ 513 (831)
++++.++
T Consensus 343 ~~~~~~~ 349 (355)
T cd03819 343 RMCVETL 349 (355)
T ss_pred HHHHHHh
Confidence 7777554
No 69
>cd04962 GT1_like_5 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=99.73 E-value=1.4e-15 Score=169.82 Aligned_cols=283 Identities=12% Similarity=0.077 Sum_probs=185.5
Q ss_pred HHHHHHHHHHHcCCCCCEEEEeCccccchHHHHHhhcC---CCeEEEEEeccCCChHHhhcCCC-hHHHHHHHhcCCeEe
Q 044635 187 NKIFADRIMEVINPEDDFVWVHDYHLMVLPTFLRKRFN---RVKLGFFLHSPFPSSEIYKTLPI-REEILRALLNSDLIG 262 (831)
Q Consensus 187 N~~fa~~i~~~~~~~~d~vwvhDyhL~llp~~lr~~~~---~~~i~~flH~PfP~~e~f~~lp~-r~eil~~ll~~dlig 262 (831)
++.+.+.+ +..+| |+|.+|.+....++..+..+.. +.++.+.+|-.-. .....-+. +.-+...+-.+|.|.
T Consensus 73 ~~~l~~~i-~~~~~--divh~~~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~--~~~~~~~~~~~~~~~~~~~~d~ii 147 (371)
T cd04962 73 ASKIAEVA-KRYKL--DLLHVHYAVPHAVAAYLAREILGKKDLPVVTTLHGTDI--TLVGQDPSFQPATRFSIEKSDGVT 147 (371)
T ss_pred HHHHHHHH-hcCCc--cEEeecccCCccHHHHHHHHhcCcCCCcEEEEEcCCcc--ccccccccchHHHHHHHhhCCEEE
Confidence 34454444 44455 8999998776566666544322 6788888884211 01111121 222334555789999
Q ss_pred ecCHHhHHHHHHHHHHHhCCeecccCceeeEEEcCEEEEEEEeecccChHHHHHhhCCcchHHHHHHHHHHhc-cCCcEE
Q 044635 263 FHTFDYARHFLSCCSRMLGLTYESKRGYIGLEYYGRTVSIKILPVGIHMGQLQSVLSLPGTEAKVSELIKQFH-DQGKVM 341 (831)
Q Consensus 263 f~t~~~~~~Fl~~~~r~l~~~~~~~~~~~~~~~~gr~~~i~v~P~GId~~~~~~~~~~~~~~~~~~~lr~~~~-~~~~~i 341 (831)
..+....+.+...+ +..-++.++|+|+|...+.... ....+++++ ..++++
T Consensus 148 ~~s~~~~~~~~~~~--------------------~~~~~i~vi~n~~~~~~~~~~~--------~~~~~~~~~~~~~~~~ 199 (371)
T cd04962 148 AVSESLRQETYELF--------------------DITKEIEVIPNFVDEDRFRPKP--------DEALKRRLGAPEGEKV 199 (371)
T ss_pred EcCHHHHHHHHHhc--------------------CCcCCEEEecCCcCHhhcCCCc--------hHHHHHhcCCCCCCeE
Confidence 98887666554311 1122567899999987764211 123445565 567899
Q ss_pred EEeccCcccccCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhccCCCCCCcc-EEEe
Q 044635 342 LLGVDDMDIFKGISLKLLAMEQLLIQHPEWQGKVVLVQIANPARGRGKDVKEVQAETYSTVERINQTFGKPGYDP-VVLI 420 (831)
Q Consensus 342 il~VdRld~~KGi~~~l~A~~~lL~~~P~~~~~vvLvqig~p~r~~~~~~~~l~~~i~~lv~~IN~~~g~~~~~p-v~~~ 420 (831)
++++||+.+.||+..+++|++++.++ ++++ |+++|. +++..++++ ++.+.+ ..+ |.+
T Consensus 200 il~~g~l~~~K~~~~li~a~~~l~~~-~~~~----l~i~G~-----g~~~~~~~~----~~~~~~-------~~~~v~~- 257 (371)
T cd04962 200 LIHISNFRPVKRIDDVIRIFAKVRKE-VPAR----LLLVGD-----GPERSPAER----LARELG-------LQDDVLF- 257 (371)
T ss_pred EEEecccccccCHHHHHHHHHHHHhc-CCce----EEEEcC-----CcCHHHHHH----HHHHcC-------CCceEEE-
Confidence 99999999999999999999988655 3344 888873 333333333 333322 222 444
Q ss_pred cCCCCHHHHHHHHHHcCEeEECCCccCCCC---CCC-CCceEEEeccccccccc---CCCceeCCCCHHHHHHHHHHHhc
Q 044635 421 DEPLKFYERIAYYVVAECCLVTAVRDGSEP---SSP-KKSMLVVSEFIGCSPSL---SGAIRVNPWNIDAVSDAMDSALE 493 (831)
Q Consensus 421 ~~~v~~~el~aly~~ADv~vvtS~~eGma~---~~~-~~g~lVlSe~~G~~~~l---~~allVnP~d~~~~A~ai~~aL~ 493 (831)
.+. .+++..+|+.||++|+||..||+.. ++. .+.|+|+|+..|..+.+ .+|++++|.|++++|++|.++++
T Consensus 258 ~g~--~~~~~~~~~~~d~~v~ps~~E~~~~~~~EAma~g~PvI~s~~~~~~e~i~~~~~G~~~~~~~~~~l~~~i~~l~~ 335 (371)
T cd04962 258 LGK--QDHVEELLSIADLFLLPSEKESFGLAALEAMACGVPVVASNAGGIPEVVKHGETGFLVDVGDVEAMAEYALSLLE 335 (371)
T ss_pred ecC--cccHHHHHHhcCEEEeCCCcCCCccHHHHHHHcCCCEEEeCCCCchhhhcCCCceEEcCCCCHHHHHHHHHHHHh
Confidence 444 3579999999999999999999821 222 25588888888877766 35899999999999999999997
Q ss_pred CCHHHHHHHHHHHhhh-hccCCHHHHHHHHHHHHH
Q 044635 494 MADQEKQLRHEKHYRY-VSTHDVGYWARSFLQDLE 527 (831)
Q Consensus 494 m~~~er~~r~~~~~~~-v~~~~~~~W~~~~l~~l~ 527 (831)
.+ +++....+++++. ...+++...++++++-++
T Consensus 336 ~~-~~~~~~~~~~~~~~~~~fs~~~~~~~~~~~y~ 369 (371)
T cd04962 336 DD-ELWQEFSRAARNRAAERFDSERIVPQYEALYR 369 (371)
T ss_pred CH-HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 44 4444445556666 567888888887776554
No 70
>cd03794 GT1_wbuB_like This family is most closely related to the GT1 family of glycosyltransferases. wbuB in E. coli is involved in the biosynthesis of the O26 O-antigen. It has been proposed to function as an N-acetyl-L-fucosamine (L-FucNAc) transferase.
Probab=99.73 E-value=1.8e-15 Score=167.42 Aligned_cols=270 Identities=16% Similarity=0.155 Sum_probs=185.7
Q ss_pred CCEEEEeC-ccccchHHHHHhhcCCCeEEEEEeccCCChHHhhcCCC--------hHHH-HHHHhcCCeEeecCHHhHHH
Q 044635 202 DDFVWVHD-YHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYKTLPI--------REEI-LRALLNSDLIGFHTFDYARH 271 (831)
Q Consensus 202 ~d~vwvhD-yhL~llp~~lr~~~~~~~i~~flH~PfP~~e~f~~lp~--------r~ei-l~~ll~~dligf~t~~~~~~ 271 (831)
-|+|++|. ..+..++....++..+.++.+.+|-.||.......... ...+ -..+-.+|.+-+.+...++.
T Consensus 100 ~D~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~s~~~~~~ 179 (394)
T cd03794 100 PDVIIATSPPLLIALAALLLARLKGAPFVLEVRDLWPESAVALGLLKNGSLLYRLLRKLERLIYRRADAIVVISPGMREY 179 (394)
T ss_pred CCEEEEcCChHHHHHHHHHHHHhcCCCEEEEehhhcchhHHHccCccccchHHHHHHHHHHHHHhcCCEEEEECHHHHHH
Confidence 38999998 44555666665666689999999998875533221111 1111 22345689999998877776
Q ss_pred HHHHHHHHhCCeecccCceeeEEEcCEEEEEEEeecccChHHHHHhhCCcchHHHHHHHHHHhc-cCCcEEEEeccCccc
Q 044635 272 FLSCCSRMLGLTYESKRGYIGLEYYGRTVSIKILPVGIHMGQLQSVLSLPGTEAKVSELIKQFH-DQGKVMLLGVDDMDI 350 (831)
Q Consensus 272 Fl~~~~r~l~~~~~~~~~~~~~~~~gr~~~i~v~P~GId~~~~~~~~~~~~~~~~~~~lr~~~~-~~~~~iil~VdRld~ 350 (831)
+.. .+ ....++.++|+|++...+...... .. +.+.. ..++.+++++||+.+
T Consensus 180 ~~~-----~~---------------~~~~~~~~i~~~~~~~~~~~~~~~----~~----~~~~~~~~~~~~i~~~G~~~~ 231 (394)
T cd03794 180 LVR-----RG---------------VPPEKISVIPNGVDLELFKPPPAD----ES----LRKELGLDDKFVVLYAGNIGR 231 (394)
T ss_pred HHh-----cC---------------CCcCceEEcCCCCCHHHcCCccch----hh----hhhccCCCCcEEEEEecCccc
Confidence 651 01 123467889999998876532110 11 22222 467889999999999
Q ss_pred ccCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhccCCCCCCccEEEecCCCCHHHHH
Q 044635 351 FKGISLKLLAMEQLLIQHPEWQGKVVLVQIANPARGRGKDVKEVQAETYSTVERINQTFGKPGYDPVVLIDEPLKFYERI 430 (831)
Q Consensus 351 ~KGi~~~l~A~~~lL~~~P~~~~~vvLvqig~p~r~~~~~~~~l~~~i~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~ 430 (831)
.||+..+++|+.++.+. |+++ |+++|. ++....+++.+. . .+...|+++ +.++.+++.
T Consensus 232 ~k~~~~l~~~~~~l~~~-~~~~----l~i~G~-----~~~~~~~~~~~~----~-------~~~~~v~~~-g~~~~~~~~ 289 (394)
T cd03794 232 AQGLDTLLEAAALLKDR-PDIR----FLIVGD-----GPEKEELKELAK----A-------LGLDNVTFL-GRVPKEELP 289 (394)
T ss_pred ccCHHHHHHHHHHHhhc-CCeE----EEEeCC-----cccHHHHHHHHH----H-------cCCCcEEEe-CCCChHHHH
Confidence 99999999999998776 6554 888873 333333333211 1 122346665 489999999
Q ss_pred HHHHHcCEeEECCCccCC---C-----CCCC-CCceEEEecccccccccC---CCceeCCCCHHHHHHHHHHHhcCCHHH
Q 044635 431 AYYVVAECCLVTAVRDGS---E-----PSSP-KKSMLVVSEFIGCSPSLS---GAIRVNPWNIDAVSDAMDSALEMADQE 498 (831)
Q Consensus 431 aly~~ADv~vvtS~~eGm---a-----~~~~-~~g~lVlSe~~G~~~~l~---~allVnP~d~~~~A~ai~~aL~m~~~e 498 (831)
++|+.||++++||..|++ + .++. .+.|+|++...|..+.+. +|+++++.|+++++++|.++++. +++
T Consensus 290 ~~~~~~di~i~~~~~~~~~~~~~p~~~~Ea~~~G~pvi~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~i~~~~~~-~~~ 368 (394)
T cd03794 290 ELLAAADVGLVPLKPGPAFEGVSPSKLFEYMAAGKPVLASVDGESAELVEEAGAGLVVPPGDPEALAAAILELLDD-PEE 368 (394)
T ss_pred HHHHhhCeeEEeccCcccccccCchHHHHHHHCCCcEEEecCCCchhhhccCCcceEeCCCCHHHHHHHHHHHHhC-hHH
Confidence 999999999999998864 1 1222 255888888888777773 58999999999999999999954 455
Q ss_pred HHHHHHHHhhhhc-cCCHHHHHHHH
Q 044635 499 KQLRHEKHYRYVS-THDVGYWARSF 522 (831)
Q Consensus 499 r~~r~~~~~~~v~-~~~~~~W~~~~ 522 (831)
+....++.++++. .+++..+++++
T Consensus 369 ~~~~~~~~~~~~~~~~s~~~~~~~~ 393 (394)
T cd03794 369 RAEMGENGRRYVEEKFSREKLAERL 393 (394)
T ss_pred HHHHHHHHHHHHHHhhcHHHHHHhc
Confidence 5566666777776 78888888765
No 71
>cd03812 GT1_CapH_like This family is most closely related to the GT1 family of glycosyltransferases. capH in Staphylococcus aureus has been shown to be required for the biosynthesis of the type 1 capsular polysaccharide (CP1).
Probab=99.72 E-value=6.9e-16 Score=171.12 Aligned_cols=258 Identities=12% Similarity=0.060 Sum_probs=168.1
Q ss_pred HHcCCCCCEEEEeCccccchHHHHHhhcCCCeEEEEEeccCCChHHhhcCCChHHH-HHHHhcCCeEeecCHHhHHHHHH
Q 044635 196 EVINPEDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYKTLPIREEI-LRALLNSDLIGFHTFDYARHFLS 274 (831)
Q Consensus 196 ~~~~~~~d~vwvhDyhL~llp~~lr~~~~~~~i~~flH~PfP~~e~f~~lp~r~ei-l~~ll~~dligf~t~~~~~~Fl~ 274 (831)
+..++ |+|.+|..++..++.++.++.....+.+..|..+...+.+........+ ...+..+|.+-..+....+.+..
T Consensus 77 ~~~~~--Dvv~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~s~~~~~~~~~ 154 (358)
T cd03812 77 KKNKY--DIVHVHGSSASGFILLAAKKAGVKVRIAHSHNTSDSHDKKKKILKYKVLRKLINRLATDYLACSEEAGKWLFG 154 (358)
T ss_pred hcCCC--CEEEEeCcchhHHHHHHHhhCCCCeEEEEeccccccccccchhhHHHHHHHHHHhcCCEEEEcCHHHHHHHHh
Confidence 34444 8999999987777777766655556677788776554433322211011 11223456666555544433321
Q ss_pred HHHHHhCCeecccCceeeEEEcCEEEEEEEeecccChHHHHHhhCCcchHHHHHHHHHHhc-cCCcEEEEeccCcccccC
Q 044635 275 CCSRMLGLTYESKRGYIGLEYYGRTVSIKILPVGIHMGQLQSVLSLPGTEAKVSELIKQFH-DQGKVMLLGVDDMDIFKG 353 (831)
Q Consensus 275 ~~~r~l~~~~~~~~~~~~~~~~gr~~~i~v~P~GId~~~~~~~~~~~~~~~~~~~lr~~~~-~~~~~iil~VdRld~~KG 353 (831)
. ....++.++|+|+|...+.... ... .. +++++ ..++.+|+++||+++.||
T Consensus 155 ~---------------------~~~~~~~vi~ngvd~~~~~~~~---~~~---~~-~~~~~~~~~~~~i~~vGr~~~~Kg 206 (358)
T cd03812 155 K---------------------VKNKKFKVIPNGIDLEKFIFNE---EIR---KK-RRELGILEDKFVIGHVGRFSEQKN 206 (358)
T ss_pred C---------------------CCcccEEEEeccCcHHHcCCCc---hhh---hH-HHHcCCCCCCEEEEEEeccccccC
Confidence 0 1124678899999998774321 111 11 33444 567899999999999999
Q ss_pred HHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhccCCCCCCccEEEecCCCCHHHHHHHH
Q 044635 354 ISLKLLAMEQLLIQHPEWQGKVVLVQIANPARGRGKDVKEVQAETYSTVERINQTFGKPGYDPVVLIDEPLKFYERIAYY 433 (831)
Q Consensus 354 i~~~l~A~~~lL~~~P~~~~~vvLvqig~p~r~~~~~~~~l~~~i~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~aly 433 (831)
++.+++|+..+.+++|+++ |+++|. ++..+.+++.+ ++. +..+.+.+.+. .+++..+|
T Consensus 207 ~~~li~a~~~l~~~~~~~~----l~ivG~-----g~~~~~~~~~~----~~~-------~~~~~v~~~g~--~~~~~~~~ 264 (358)
T cd03812 207 HEFLIEIFAELLKKNPNAK----LLLVGD-----GELEEEIKKKV----KEL-------GLEDKVIFLGV--RNDVPELL 264 (358)
T ss_pred hHHHHHHHHHHHHhCCCeE----EEEEeC-----CchHHHHHHHH----Hhc-------CCCCcEEEecc--cCCHHHHH
Confidence 9999999999999998766 888883 34433444333 321 22233344554 67899999
Q ss_pred HHcCEeEECCCccCCC---CCCCC-CceEEEecccccccccC--CCceeCCCCHHHHHHHHHHHhcCCHHHHHHHHHH
Q 044635 434 VVAECCLVTAVRDGSE---PSSPK-KSMLVVSEFIGCSPSLS--GAIRVNPWNIDAVSDAMDSALEMADQEKQLRHEK 505 (831)
Q Consensus 434 ~~ADv~vvtS~~eGma---~~~~~-~g~lVlSe~~G~~~~l~--~allVnP~d~~~~A~ai~~aL~m~~~er~~r~~~ 505 (831)
+.||++|+||..||+. .+++. +.|+|+|..+|..+.+. ++++..+.+++++|++|.++++.++.++..+..+
T Consensus 265 ~~adi~v~ps~~E~~~~~~lEAma~G~PvI~s~~~~~~~~i~~~~~~~~~~~~~~~~a~~i~~l~~~~~~~~~~~~~~ 342 (358)
T cd03812 265 QAMDVFLFPSLYEGLPLVLIEAQASGLPCILSDTITKEVDLTDLVKFLSLDESPEIWAEEILKLKSEDRRERSSESIK 342 (358)
T ss_pred HhcCEEEecccccCCCHHHHHHHHhCCCEEEEcCCchhhhhccCccEEeCCCCHHHHHHHHHHHHhCcchhhhhhhhh
Confidence 9999999999999982 12222 55888888888777773 3455555678999999999999887655444333
No 72
>cd03806 GT1_ALG11_like This family is most closely related to the GT1 family of glycosyltransferases. ALG11 in yeast is involved in adding the final 1,2-linked Man to the Man5GlcNAc2-PP-Dol synthesized on the cytosolic face of the ER. The deletion analysis of ALG11 was shown to block the early steps of core biosynthesis that takes place on the cytoplasmic face of the ER and lead to a defect in the assembly of lipid-linked oligosaccharides.
Probab=99.72 E-value=7.1e-16 Score=175.98 Aligned_cols=268 Identities=15% Similarity=0.110 Sum_probs=172.9
Q ss_pred CCCCCEEEEeCccccchHHHHHhhcCCCeEEEEEeccCCChHHhhcCCCh-------------H--HH------------
Q 044635 199 NPEDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYKTLPIR-------------E--EI------------ 251 (831)
Q Consensus 199 ~~~~d~vwvhDyhL~llp~~lr~~~~~~~i~~flH~PfP~~e~f~~lp~r-------------~--ei------------ 251 (831)
.| | |||.+ +-+..+..+.+.++++|+++.+|-|.-+++.+..+-.+ . .+
T Consensus 107 ~p--D-v~i~~-~g~~~~~~~~~~~~~~~~i~y~h~P~~~~d~l~~~~~~~~~~~~~~~~~~~~~~~~~k~~y~~~~~~~ 182 (419)
T cd03806 107 VP--D-IFIDT-MGYPFTYPLVRLLGGCPVGAYVHYPTISTDMLQKVRSREASYNNSATIARSPVLSKAKLLYYRLFAFL 182 (419)
T ss_pred CC--C-EEEEc-CCcccHHHHHHHhcCCeEEEEecCCcchHHHHHHHhhccccccCccchhccchHHHHHHHHHHHHHHH
Confidence 56 6 55543 33333344556677999999999443345554322111 1 11
Q ss_pred -HHHHhcCCeEeecCHHhHHHHHHHHHHHhCCeecccCceeeEEEcCEEEEEEEeecccChHHHHHhhCCcchHHHHHHH
Q 044635 252 -LRALLNSDLIGFHTFDYARHFLSCCSRMLGLTYESKRGYIGLEYYGRTVSIKILPVGIHMGQLQSVLSLPGTEAKVSEL 330 (831)
Q Consensus 252 -l~~ll~~dligf~t~~~~~~Fl~~~~r~l~~~~~~~~~~~~~~~~gr~~~i~v~P~GId~~~~~~~~~~~~~~~~~~~l 330 (831)
.-.+-.||.|-..+..-.+++.+. . +...++.++|+|+|.+.|.....
T Consensus 183 ~~~~~~~aD~ii~~S~~~~~~~~~~----~----------------~~~~~~~vi~~gvd~~~~~~~~~----------- 231 (419)
T cd03806 183 YGLAGSFADVVMVNSTWTRNHIRSL----W----------------KRNTKPSIVYPPCDVEELLKLPL----------- 231 (419)
T ss_pred HHHHhhcCCEEEECCHHHHHHHHHH----h----------------CcCCCcEEEcCCCCHHHhccccc-----------
Confidence 112336788877776555544321 1 11125678899999987742210
Q ss_pred HHHhccCCcEEEEeccCcccccCHHHHHHHHHHHHHhCCCCC-CcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhccC
Q 044635 331 IKQFHDQGKVMLLGVDDMDIFKGISLKLLAMEQLLIQHPEWQ-GKVVLVQIANPARGRGKDVKEVQAETYSTVERINQTF 409 (831)
Q Consensus 331 r~~~~~~~~~iil~VdRld~~KGi~~~l~A~~~lL~~~P~~~-~~vvLvqig~p~r~~~~~~~~l~~~i~~lv~~IN~~~ 409 (831)
..- .++++|+++||+.+.||+..+|+||.++.+++|+.. .++.|+++|.... .+..++.+++++++++.+
T Consensus 232 -~~~--~~~~~il~vgr~~~~K~~~~li~A~~~l~~~~~~~~~~~~~lvivG~~~~---~~~~~~~~~L~~~~~~l~--- 302 (419)
T cd03806 232 -DEK--TRENQILSIAQFRPEKNHPLQLRAFAKLLKRLPEEIKEKIKLVLIGSCRN---EDDEKRVEDLKLLAKELG--- 302 (419)
T ss_pred -ccc--cCCcEEEEEEeecCCCCHHHHHHHHHHHHHhCcccccCceEEEEEcCCCC---cccHHHHHHHHHHHHHhC---
Confidence 011 456799999999999999999999999999887621 2466999985321 111235566666666543
Q ss_pred CCCCCccEEEecCCCCHHHHHHHHHHcCEeEECCCccCCC---CCCCCCc-eEEEeccccccccc-C------CCceeCC
Q 044635 410 GKPGYDPVVLIDEPLKFYERIAYYVVAECCLVTAVRDGSE---PSSPKKS-MLVVSEFIGCSPSL-S------GAIRVNP 478 (831)
Q Consensus 410 g~~~~~pv~~~~~~v~~~el~aly~~ADv~vvtS~~eGma---~~~~~~g-~lVlSe~~G~~~~l-~------~allVnP 478 (831)
....+.|.+.++.+++..+|+.||++|.||..|||. .+++..| |+|++..+|..+++ . +|++++
T Consensus 303 ----l~~~V~f~g~v~~~~l~~~l~~adv~v~~s~~E~Fgi~~lEAMa~G~pvIa~~~ggp~~~iv~~~~~g~~G~l~~- 377 (419)
T cd03806 303 ----LEDKVEFVVNAPFEELLEELSTASIGLHTMWNEHFGIGVVEYMAAGLIPLAHASGGPLLDIVVPWDGGPTGFLAS- 377 (419)
T ss_pred ----CCCeEEEecCCCHHHHHHHHHhCeEEEECCccCCcccHHHHHHHcCCcEEEEcCCCCchheeeccCCCCceEEeC-
Confidence 223445567899999999999999999999999882 2333344 67777766765433 3 478874
Q ss_pred CCHHHHHHHHHHHhcCCHHHHHHHHHHHhhhhccCCHH
Q 044635 479 WNIDAVSDAMDSALEMADQEKQLRHEKHYRYVSTHDVG 516 (831)
Q Consensus 479 ~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~ 516 (831)
|++++|++|.++++++++++..+.+..++...+++..
T Consensus 378 -d~~~la~ai~~ll~~~~~~~~~~~~~~~~~~~~fs~~ 414 (419)
T cd03806 378 -TAEEYAEAIEKILSLSEEERLRIRRAARSSVKRFSDE 414 (419)
T ss_pred -CHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhhCHH
Confidence 9999999999999998776665444444444555543
No 73
>cd03813 GT1_like_3 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=99.71 E-value=6.9e-16 Score=179.02 Aligned_cols=272 Identities=14% Similarity=0.107 Sum_probs=178.9
Q ss_pred CCCCEEEEeCccccchHHHHHhhcCCCeEEEEEeccCCCh---HHhhc---CCChHHH--------H-HHHhcCCeEeec
Q 044635 200 PEDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSS---EIYKT---LPIREEI--------L-RALLNSDLIGFH 264 (831)
Q Consensus 200 ~~~d~vwvhDyhL~llp~~lr~~~~~~~i~~flH~PfP~~---e~f~~---lp~r~ei--------l-~~ll~~dligf~ 264 (831)
++-|+|++|......++..+.++..++|+.+..|--+|.. +++.. .+....+ . ...-.||.|...
T Consensus 172 ~~~dviH~~s~~~~g~~~~~~~~~~~~p~I~t~Hg~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ad~Ii~~ 251 (475)
T cd03813 172 PKADVYHAVSTGYAGLLGALAKARRGTPFLLTEHGIYTRERKIELLQADWEMSYFRRLWIRFFESLGRLAYQAADRITTL 251 (475)
T ss_pred CCCCEEeccCcchHHHHHHHHHHHhCCCEEEecCCccHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHHHhCCEEEec
Confidence 3459999998766666666656666899999999655421 22211 0000111 1 112245655544
Q ss_pred CHHhHHHHHHHHHHHhCCeecccCceeeEEEcCEEEEEEEeecccChHHHHHhhCCcchHHHHHHHHHHhccCCcEEEEe
Q 044635 265 TFDYARHFLSCCSRMLGLTYESKRGYIGLEYYGRTVSIKILPVGIHMGQLQSVLSLPGTEAKVSELIKQFHDQGKVMLLG 344 (831)
Q Consensus 265 t~~~~~~Fl~~~~r~l~~~~~~~~~~~~~~~~gr~~~i~v~P~GId~~~~~~~~~~~~~~~~~~~lr~~~~~~~~~iil~ 344 (831)
+....+ .+. .++....++.++|+|||.+.|..... . .. ..++++|++
T Consensus 252 s~~~~~-~~~-------------------~~g~~~~ki~vIpNgid~~~f~~~~~---------~--~~--~~~~~~i~~ 298 (475)
T cd03813 252 YEGNRE-RQI-------------------EDGADPEKIRVIPNGIDPERFAPARR---------A--RP--EKEPPVVGL 298 (475)
T ss_pred CHHHHH-HHH-------------------HcCCCHHHeEEeCCCcCHHHcCCccc---------c--cc--CCCCcEEEE
Confidence 432221 111 11222346788999999988753211 0 11 256789999
Q ss_pred ccCcccccCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhccCCCCCCccEEEecCCC
Q 044635 345 VDDMDIFKGISLKLLAMEQLLIQHPEWQGKVVLVQIANPARGRGKDVKEVQAETYSTVERINQTFGKPGYDPVVLIDEPL 424 (831)
Q Consensus 345 VdRld~~KGi~~~l~A~~~lL~~~P~~~~~vvLvqig~p~r~~~~~~~~l~~~i~~lv~~IN~~~g~~~~~pv~~~~~~v 424 (831)
+||+.+.||+..+++|+..+.++.|+++ |+++|.. ++..++.+++++++++.+. .+.+.+.|
T Consensus 299 vGrl~~~Kg~~~li~a~~~l~~~~p~~~----l~IvG~g-----~~~~~~~~e~~~li~~l~l-------~~~V~f~G-- 360 (475)
T cd03813 299 IGRVVPIKDIKTFIRAAAIVRKKIPDAE----GWVIGPT-----DEDPEYAEECRELVESLGL-------EDNVKFTG-- 360 (475)
T ss_pred EeccccccCHHHHHHHHHHHHHhCCCeE----EEEECCC-----CcChHHHHHHHHHHHHhCC-------CCeEEEcC--
Confidence 9999999999999999999998888766 8888843 2223456677777776542 12334454
Q ss_pred CHHHHHHHHHHcCEeEECCCccCCCC---CCCC-CceEEEeccccccccc-C--------CCceeCCCCHHHHHHHHHHH
Q 044635 425 KFYERIAYYVVAECCLVTAVRDGSEP---SSPK-KSMLVVSEFIGCSPSL-S--------GAIRVNPWNIDAVSDAMDSA 491 (831)
Q Consensus 425 ~~~el~aly~~ADv~vvtS~~eGma~---~~~~-~g~lVlSe~~G~~~~l-~--------~allVnP~d~~~~A~ai~~a 491 (831)
.+++..+|+.||++|+||..||+.. +++. +.|+|+|..+|+.+.+ . +|++++|.|++++|++|.++
T Consensus 361 -~~~v~~~l~~aDv~vlpS~~Eg~p~~vlEAma~G~PVVatd~g~~~elv~~~~~~~~g~~G~lv~~~d~~~la~ai~~l 439 (475)
T cd03813 361 -FQNVKEYLPKLDVLVLTSISEGQPLVILEAMAAGIPVVATDVGSCRELIEGADDEALGPAGEVVPPADPEALARAILRL 439 (475)
T ss_pred -CccHHHHHHhCCEEEeCchhhcCChHHHHHHHcCCCEEECCCCChHHHhcCCcccccCCceEEECCCCHHHHHHHHHHH
Confidence 6789999999999999999999821 2222 4577777777777666 3 48999999999999999999
Q ss_pred hcCCHHHHHHHHHHHhhhhcc-CCHHHHHHHHHH
Q 044635 492 LEMADQEKQLRHEKHYRYVST-HDVGYWARSFLQ 524 (831)
Q Consensus 492 L~m~~~er~~r~~~~~~~v~~-~~~~~W~~~~l~ 524 (831)
++. ++++....+..++++.+ +++...++++.+
T Consensus 440 l~~-~~~~~~~~~~a~~~v~~~~s~~~~~~~y~~ 472 (475)
T cd03813 440 LKD-PELRRAMGEAGRKRVERYYTLERMIDSYRR 472 (475)
T ss_pred hcC-HHHHHHHHHHHHHHHHHhCCHHHHHHHHHH
Confidence 984 44555556667777765 455555555443
No 74
>cd03801 GT1_YqgM_like This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold.
Probab=99.70 E-value=2.7e-15 Score=164.02 Aligned_cols=280 Identities=17% Similarity=0.134 Sum_probs=191.2
Q ss_pred HHHcCCCCCEEEEeCccccchHHHHHhhcCCCeEEEEEeccCCChHHhh----cCCChHHHHHHHhcCCeEeecCHHhHH
Q 044635 195 MEVINPEDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYK----TLPIREEILRALLNSDLIGFHTFDYAR 270 (831)
Q Consensus 195 ~~~~~~~~d~vwvhDyhL~llp~~lr~~~~~~~i~~flH~PfP~~e~f~----~lp~r~eil~~ll~~dligf~t~~~~~ 270 (831)
.+..++ |+|++|+++...+.. +..+.++.++.+.+|-++|...... ...........+-.+|.+-+.+....+
T Consensus 81 ~~~~~~--Dii~~~~~~~~~~~~-~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~s~~~~~ 157 (374)
T cd03801 81 LRRERF--DVVHAHDWLALLAAA-LAARLLGIPLVLTVHGLEFGRPGNELGLLLKLARALERRALRRADRIIAVSEATRE 157 (374)
T ss_pred hhhcCC--cEEEEechhHHHHHH-HHHHhcCCcEEEEeccchhhccccchhHHHHHHHHHHHHHHHhCCEEEEecHHHHH
Confidence 344444 899999999888776 4455678999999999887543221 111122233444567888888876666
Q ss_pred HHHHHHHHHhCCeecccCceeeEEEcCEEEEEEEeecccChHHHHHhhCCcchHHHHHHHHHHhc-cCCcEEEEeccCcc
Q 044635 271 HFLSCCSRMLGLTYESKRGYIGLEYYGRTVSIKILPVGIHMGQLQSVLSLPGTEAKVSELIKQFH-DQGKVMLLGVDDMD 349 (831)
Q Consensus 271 ~Fl~~~~r~l~~~~~~~~~~~~~~~~gr~~~i~v~P~GId~~~~~~~~~~~~~~~~~~~lr~~~~-~~~~~iil~VdRld 349 (831)
.+.+.. .....++.++|+|+|...+.... ...+.... ..+++.++++||++
T Consensus 158 ~~~~~~-------------------~~~~~~~~~i~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~i~~~g~~~ 209 (374)
T cd03801 158 ELRELG-------------------GVPPEKITVIPNGVDTERFRPAP---------RAARRRLGIPEDEPVILFVGRLV 209 (374)
T ss_pred HHHhcC-------------------CCCCCcEEEecCcccccccCccc---------hHHHhhcCCcCCCeEEEEecchh
Confidence 554311 01124677899999987764211 12222332 35678999999999
Q ss_pred cccCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhccCCCCCCccEEEecCCCCHHHH
Q 044635 350 IFKGISLKLLAMEQLLIQHPEWQGKVVLVQIANPARGRGKDVKEVQAETYSTVERINQTFGKPGYDPVVLIDEPLKFYER 429 (831)
Q Consensus 350 ~~KGi~~~l~A~~~lL~~~P~~~~~vvLvqig~p~r~~~~~~~~l~~~i~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el 429 (831)
+.||+..+++|+..+.+++|+++ |+++| .++....+++ ++.+.+ ..+-+.+.+.++.+|+
T Consensus 210 ~~k~~~~~i~~~~~~~~~~~~~~----l~i~G-----~~~~~~~~~~----~~~~~~-------~~~~v~~~g~~~~~~~ 269 (374)
T cd03801 210 PRKGVDLLLEALAKLRKEYPDVR----LVIVG-----DGPLREELEA----LAAELG-------LGDRVTFLGFVPDEDL 269 (374)
T ss_pred hhcCHHHHHHHHHHHhhhcCCeE----EEEEe-----CcHHHHHHHH----HHHHhC-------CCcceEEEeccChhhH
Confidence 99999999999999988887655 88888 2333333333 332221 1233456678999999
Q ss_pred HHHHHHcCEeEECCCccCCCC---CC-CCCceEEEecccccccccC---CCceeCCCCHHHHHHHHHHHhcCCHHHHHHH
Q 044635 430 IAYYVVAECCLVTAVRDGSEP---SS-PKKSMLVVSEFIGCSPSLS---GAIRVNPWNIDAVSDAMDSALEMADQEKQLR 502 (831)
Q Consensus 430 ~aly~~ADv~vvtS~~eGma~---~~-~~~g~lVlSe~~G~~~~l~---~allVnP~d~~~~A~ai~~aL~m~~~er~~r 502 (831)
..+|+.||++++|+..||+.. ++ ..+.|+|++...|..+.+. .|+++++.|+++++++|.++++.+.. +...
T Consensus 270 ~~~~~~~di~i~~~~~~~~~~~~~Ea~~~g~pvI~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~i~~~~~~~~~-~~~~ 348 (374)
T cd03801 270 PALYAAADVFVLPSLYEGFGLVLLEAMAAGLPVVASDVGGIPEVVEDGETGLLVPPGDPEALAEAILRLLDDPEL-RRRL 348 (374)
T ss_pred HHHHHhcCEEEecchhccccchHHHHHHcCCcEEEeCCCChhHHhcCCcceEEeCCCCHHHHHHHHHHHHcChHH-HHHH
Confidence 999999999999999998821 11 2255788888777777663 68999999999999999999986543 3333
Q ss_pred HHHHh-hhhccCCHHHHHHHHHHHH
Q 044635 503 HEKHY-RYVSTHDVGYWARSFLQDL 526 (831)
Q Consensus 503 ~~~~~-~~v~~~~~~~W~~~~l~~l 526 (831)
.+..+ .....+++..+++++++-+
T Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~~~~ 373 (374)
T cd03801 349 GEAARERVAERFSWDRVAARTEEVY 373 (374)
T ss_pred HHHHHHHHHHhcCHHHHHHHHHHhh
Confidence 44444 5567789999888776643
No 75
>PRK15179 Vi polysaccharide biosynthesis protein TviE; Provisional
Probab=99.70 E-value=1.2e-15 Score=181.20 Aligned_cols=272 Identities=11% Similarity=0.078 Sum_probs=167.9
Q ss_pred CEEEEeCccccchHHHHHhhcCCCeEEE-EEeccCC---ChHHhhcCCChHHHHHHHhcCCeEeec--CHHhHHHHHHHH
Q 044635 203 DFVWVHDYHLMVLPTFLRKRFNRVKLGF-FLHSPFP---SSEIYKTLPIREEILRALLNSDLIGFH--TFDYARHFLSCC 276 (831)
Q Consensus 203 d~vwvhDyhL~llp~~lr~~~~~~~i~~-flH~PfP---~~e~f~~lp~r~eil~~ll~~dligf~--t~~~~~~Fl~~~ 276 (831)
|+|.+|.+.-.++..+..+. ..+|+.+ .+|. +| ..+.++. ....+.+.+..++.+.+- +....+.+..
T Consensus 402 DIVH~h~~~a~~lg~lAa~~-~gvPvIv~t~h~-~~~~~~~~~~~~--~~~~l~~~l~~~~~~i~Vs~S~~~~~~l~~-- 475 (694)
T PRK15179 402 SVVHIWQDGSIFACALAALL-AGVPRIVLSVRT-MPPVDRPDRYRV--EYDIIYSELLKMRGVALSSNSQFAAHRYAD-- 475 (694)
T ss_pred cEEEEeCCcHHHHHHHHHHH-cCCCEEEEEeCC-CccccchhHHHH--HHHHHHHHHHhcCCeEEEeCcHHHHHHHHH--
Confidence 89999998877776666543 3455544 4564 22 2221110 011222334444433332 2222223322
Q ss_pred HHHhCCeecccCceeeEEEcCEEEEEEEeecccChHHHHHhhCCcchHHHHHHHHHHhccCCcEEEEeccCcccccCHHH
Q 044635 277 SRMLGLTYESKRGYIGLEYYGRTVSIKILPVGIHMGQLQSVLSLPGTEAKVSELIKQFHDQGKVMLLGVDDMDIFKGISL 356 (831)
Q Consensus 277 ~r~l~~~~~~~~~~~~~~~~gr~~~i~v~P~GId~~~~~~~~~~~~~~~~~~~lr~~~~~~~~~iil~VdRld~~KGi~~ 356 (831)
.+ +....+|.++|+|||...|.+ .+........++... +.+.++|++|||+++.||+..
T Consensus 476 --~~---------------g~~~~kI~VI~NGVd~~~f~~---~~~~~~~~~~~~~~~-~~~~~vIg~VGRL~~~KG~~~ 534 (694)
T PRK15179 476 --WL---------------GVDERRIPVVYNGLAPLKSVQ---DDACTAMMAQFDART-SDARFTVGTVMRVDDNKRPFL 534 (694)
T ss_pred --Hc---------------CCChhHEEEECCCcCHHhcCC---CchhhHHHHhhcccc-CCCCeEEEEEEeCCccCCHHH
Confidence 11 122347888999999887742 111111112222222 245678999999999999999
Q ss_pred HHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhccCCCCCCccEEEecCCCCHHHHHHHHHHc
Q 044635 357 KLLAMEQLLIQHPEWQGKVVLVQIANPARGRGKDVKEVQAETYSTVERINQTFGKPGYDPVVLIDEPLKFYERIAYYVVA 436 (831)
Q Consensus 357 ~l~A~~~lL~~~P~~~~~vvLvqig~p~r~~~~~~~~l~~~i~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~A 436 (831)
+|+||.++++++|+++ |+++|. |+.. +++++++.+.+ ....+.|.|.. +++..+|+.|
T Consensus 535 LI~A~a~l~~~~p~~~----LvIvG~-----G~~~----~~L~~l~~~lg-------L~~~V~flG~~--~dv~~ll~aa 592 (694)
T PRK15179 535 WVEAAQRFAASHPKVR----FIMVGG-----GPLL----ESVREFAQRLG-------MGERILFTGLS--RRVGYWLTQF 592 (694)
T ss_pred HHHHHHHHHHHCcCeE----EEEEcc-----Ccch----HHHHHHHHHcC-------CCCcEEEcCCc--chHHHHHHhc
Confidence 9999999999999876 998984 3333 34445554432 23455566664 4799999999
Q ss_pred CEeEECCCccCCC---CCCCC-CceEEEeccccccccc---CCCceeCCCCH--HHHHHHHHHHhcCCHHHHHHHHHHHh
Q 044635 437 ECCLVTAVRDGSE---PSSPK-KSMLVVSEFIGCSPSL---SGAIRVNPWNI--DAVSDAMDSALEMADQEKQLRHEKHY 507 (831)
Q Consensus 437 Dv~vvtS~~eGma---~~~~~-~g~lVlSe~~G~~~~l---~~allVnP~d~--~~~A~ai~~aL~m~~~er~~r~~~~~ 507 (831)
|++|+||.+|||. .+++. +.|+|+|...|..+.+ .+|++|+|.|+ ++++++|.+++........ ..++.+
T Consensus 593 Dv~VlpS~~Egfp~vlLEAMA~G~PVVat~~gG~~EiV~dg~~GlLv~~~d~~~~~La~aL~~ll~~l~~~~~-l~~~ar 671 (694)
T PRK15179 593 NAFLLLSRFEGLPNVLIEAQFSGVPVVTTLAGGAGEAVQEGVTGLTLPADTVTAPDVAEALARIHDMCAADPG-IARKAA 671 (694)
T ss_pred CEEEeccccccchHHHHHHHHcCCeEEEECCCChHHHccCCCCEEEeCCCCCChHHHHHHHHHHHhChhccHH-HHHHHH
Confidence 9999999999982 12222 4567777777777766 35899998875 6899999888875433222 234556
Q ss_pred hhh-ccCCHHHHHHHHHH
Q 044635 508 RYV-STHDVGYWARSFLQ 524 (831)
Q Consensus 508 ~~v-~~~~~~~W~~~~l~ 524 (831)
+++ .++++...++++++
T Consensus 672 ~~a~~~FS~~~~~~~~~~ 689 (694)
T PRK15179 672 DWASARFSLNQMIASTVR 689 (694)
T ss_pred HHHHHhCCHHHHHHHHHH
Confidence 655 46777776666654
No 76
>cd03809 GT1_mtfB_like This family is most closely related to the GT1 family of glycosyltransferases. mtfB (mannosyltransferase B) in E. coli has been shown to direct the growth of the O9-specific polysaccharide chain. It transfers two mannoses into the position 3 of the previously synthesized polysaccharide.
Probab=99.70 E-value=7.1e-16 Score=170.42 Aligned_cols=267 Identities=18% Similarity=0.169 Sum_probs=185.1
Q ss_pred CEEEEeCccccchHHHHHhhcCCCeEEEEEeccCCCh--HHhhc---CCChHHHHHHHhcCCeEeecCHHhHHHHHHHHH
Q 044635 203 DFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSS--EIYKT---LPIREEILRALLNSDLIGFHTFDYARHFLSCCS 277 (831)
Q Consensus 203 d~vwvhDyhL~llp~~lr~~~~~~~i~~flH~PfP~~--e~f~~---lp~r~eil~~ll~~dligf~t~~~~~~Fl~~~~ 277 (831)
|+||+|.+..... +....|+.+.+|-.+|.. +.+.. ...+.-+...+..+|.+.+.+...++.+....
T Consensus 87 Dii~~~~~~~~~~------~~~~~~~i~~~hd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~s~~~~~~~~~~~- 159 (365)
T cd03809 87 DLLHSPHNTAPLL------RLRGVPVVVTIHDLIPLRFPEYFSPGFRRYFRRLLRRALRRADAIITVSEATKRDLLRYL- 159 (365)
T ss_pred CeeeecccccCcc------cCCCCCEEEEeccchhhhCcccCCHHHHHHHHHHHHHHHHHcCEEEEccHHHHHHHHHHh-
Confidence 8999998887776 456889999999655422 11111 11234455666778999998877666665421
Q ss_pred HHhCCeecccCceeeEEEcCEEEEEEEeecccChHHHHHhhCCcchHHHHHHHHHHhc-cCCcEEEEeccCcccccCHHH
Q 044635 278 RMLGLTYESKRGYIGLEYYGRTVSIKILPVGIHMGQLQSVLSLPGTEAKVSELIKQFH-DQGKVMLLGVDDMDIFKGISL 356 (831)
Q Consensus 278 r~l~~~~~~~~~~~~~~~~gr~~~i~v~P~GId~~~~~~~~~~~~~~~~~~~lr~~~~-~~~~~iil~VdRld~~KGi~~ 356 (831)
+. ...++.++|+|+|...+.... . .. +.+.. ..++++|+++||+.+.||+..
T Consensus 160 ---~~---------------~~~~~~vi~~~~~~~~~~~~~----~-~~----~~~~~~~~~~~~i~~~G~~~~~K~~~~ 212 (365)
T cd03809 160 ---GV---------------PPDKIVVIPLGVDPRFRPPPA----E-AE----VLRALYLLPRPYFLYVGTIEPRKNLER 212 (365)
T ss_pred ---Cc---------------CHHHEEeeccccCccccCCCc----h-HH----HHHHhcCCCCCeEEEeCCCccccCHHH
Confidence 10 123567899999987764211 1 11 11222 367889999999999999999
Q ss_pred HHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhccCCCCCCccEEEecCCCCHHHHHHHHHHc
Q 044635 357 KLLAMEQLLIQHPEWQGKVVLVQIANPARGRGKDVKEVQAETYSTVERINQTFGKPGYDPVVLIDEPLKFYERIAYYVVA 436 (831)
Q Consensus 357 ~l~A~~~lL~~~P~~~~~vvLvqig~p~r~~~~~~~~l~~~i~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~A 436 (831)
+++|+..+.+++|+++ |+++|... ........++ .+ . +..+.+.+.+.++.+++..+|+.|
T Consensus 213 ~l~~~~~~~~~~~~~~----l~i~G~~~----~~~~~~~~~~----~~----~---~~~~~v~~~g~~~~~~~~~~~~~~ 273 (365)
T cd03809 213 LLEAFARLPAKGPDPK----LVIVGKRG----WLNEELLARL----RE----L---GLGDRVRFLGYVSDEELAALYRGA 273 (365)
T ss_pred HHHHHHHHHHhcCCCC----EEEecCCc----cccHHHHHHH----HH----c---CCCCeEEECCCCChhHHHHHHhhh
Confidence 9999999998888655 88888432 1112222222 11 1 223456677899999999999999
Q ss_pred CEeEECCCccCCCC---CCCC-CceEEEeccccccccc-CCCceeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHhhhhc
Q 044635 437 ECCLVTAVRDGSEP---SSPK-KSMLVVSEFIGCSPSL-SGAIRVNPWNIDAVSDAMDSALEMADQEKQLRHEKHYRYVS 511 (831)
Q Consensus 437 Dv~vvtS~~eGma~---~~~~-~g~lVlSe~~G~~~~l-~~allVnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~ 511 (831)
|++++||..||++. ++.. +.|+|+|+..|..+.+ .+++.++|.|+++++++|.++++ .++.+....+..++.+.
T Consensus 274 d~~l~ps~~e~~~~~~~Ea~a~G~pvI~~~~~~~~e~~~~~~~~~~~~~~~~~~~~i~~l~~-~~~~~~~~~~~~~~~~~ 352 (365)
T cd03809 274 RAFVFPSLYEGFGLPVLEAMACGTPVIASNISSLPEVAGDAALYFDPLDPEALAAAIERLLE-DPALREELRERGLARAK 352 (365)
T ss_pred hhhcccchhccCCCCHHHHhcCCCcEEecCCCCccceecCceeeeCCCCHHHHHHHHHHHhc-CHHHHHHHHHHHHHHHH
Confidence 99999999999831 2222 4466666665555555 57899999999999999999986 44555555566677888
Q ss_pred cCCHHHHHHHHH
Q 044635 512 THDVGYWARSFL 523 (831)
Q Consensus 512 ~~~~~~W~~~~l 523 (831)
++++..++++++
T Consensus 353 ~~sw~~~~~~~~ 364 (365)
T cd03809 353 RFSWEKTARRTL 364 (365)
T ss_pred hCCHHHHHHHHh
Confidence 999999998775
No 77
>cd03817 GT1_UGDG_like This family is most closely related to the GT1 family of glycosyltransferases. UDP-glucose-diacylglycerol glucosyltransferase (UGDG; also known as 1,2-diacylglycerol 3-glucosyltransferase) catalyzes the transfer of glucose from UDP-glucose to 1,2-diacylglycerol forming 3-D-glucosyl-1,2-diacylglycerol.
Probab=99.69 E-value=2.7e-15 Score=165.49 Aligned_cols=265 Identities=15% Similarity=0.185 Sum_probs=174.4
Q ss_pred HHHcCCCCCEEEEeCccccchHHHHHhhcCCCeEEEEEeccCCChHHhhcCCChH----------HHHHHHhcCCeEeec
Q 044635 195 MEVINPEDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYKTLPIRE----------EILRALLNSDLIGFH 264 (831)
Q Consensus 195 ~~~~~~~~d~vwvhDyhL~llp~~lr~~~~~~~i~~flH~PfP~~e~f~~lp~r~----------eil~~ll~~dligf~ 264 (831)
.+..+| |+|++|+...+........+..++++.+.+|.+|+. +....+... -....+-.+|.+-+.
T Consensus 80 ~~~~~~--Div~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~i~~~ 155 (374)
T cd03817 80 LKELGP--DIVHTHTPFSLGLLGLRVARKLGIPVVATYHTMYED--YTHYVPLGRLLARAVVRRKLSRRFYNRCDAVIAP 155 (374)
T ss_pred HhhcCC--CEEEECCchhhhhHHHHHHHHcCCCEEEEecCCHHH--HHHHHhcccchhHHHHHHHHHHHHhhhCCEEEec
Confidence 344555 899999875544444444444578999999988863 222222111 111233457888877
Q ss_pred CHHhHHHHHHHHHHHhCCeecccCceeeEEEcCEEEEEEEeecccChHHHHHhhCCcchHHHHHHHHHHhc-cCCcEEEE
Q 044635 265 TFDYARHFLSCCSRMLGLTYESKRGYIGLEYYGRTVSIKILPVGIHMGQLQSVLSLPGTEAKVSELIKQFH-DQGKVMLL 343 (831)
Q Consensus 265 t~~~~~~Fl~~~~r~l~~~~~~~~~~~~~~~~gr~~~i~v~P~GId~~~~~~~~~~~~~~~~~~~lr~~~~-~~~~~iil 343 (831)
+......+.. . +...++.++|+|+|...+..... ...++.++ ..++++|+
T Consensus 156 s~~~~~~~~~-----~----------------~~~~~~~vi~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~i~ 206 (374)
T cd03817 156 SEKIADLLRE-----Y----------------GVKRPIEVIPTGIDLDRFEPVDG--------DDERRKLGIPEDEPVLL 206 (374)
T ss_pred cHHHHHHHHh-----c----------------CCCCceEEcCCccchhccCccch--------hHHHHhcCCCCCCeEEE
Confidence 7764443321 0 11224788999999877643211 11134444 45678999
Q ss_pred eccCcccccCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhccCCCCCCccEEEecCC
Q 044635 344 GVDDMDIFKGISLKLLAMEQLLIQHPEWQGKVVLVQIANPARGRGKDVKEVQAETYSTVERINQTFGKPGYDPVVLIDEP 423 (831)
Q Consensus 344 ~VdRld~~KGi~~~l~A~~~lL~~~P~~~~~vvLvqig~p~r~~~~~~~~l~~~i~~lv~~IN~~~g~~~~~pv~~~~~~ 423 (831)
++||+.+.||+..+++|+..+.++.|+++ |+++|. ++.. .++.+++.+.+ ..+.+.+.+.
T Consensus 207 ~~G~~~~~k~~~~l~~~~~~~~~~~~~~~----l~i~G~-----~~~~----~~~~~~~~~~~-------~~~~v~~~g~ 266 (374)
T cd03817 207 YVGRLAKEKNIDFLIRAFARLLKEEPDVK----LVIVGD-----GPER----EELEELARELG-------LADRVIFTGF 266 (374)
T ss_pred EEeeeecccCHHHHHHHHHHHHHhCCCeE----EEEEeC-----CchH----HHHHHHHHHcC-------CCCcEEEecc
Confidence 99999999999999999999988767654 888883 3332 33334443322 2234456778
Q ss_pred CCHHHHHHHHHHcCEeEECCCccCCCC---CCCC-CceEEEeccccccccc---CCCceeCCCCHHHHHHHHHHHhcCCH
Q 044635 424 LKFYERIAYYVVAECCLVTAVRDGSEP---SSPK-KSMLVVSEFIGCSPSL---SGAIRVNPWNIDAVSDAMDSALEMAD 496 (831)
Q Consensus 424 v~~~el~aly~~ADv~vvtS~~eGma~---~~~~-~g~lVlSe~~G~~~~l---~~allVnP~d~~~~A~ai~~aL~m~~ 496 (831)
++.+++..+|+.||++++||..||+.. ++.. +.|+|++...|..+.+ .+|+++++.|. +++++|.++++++.
T Consensus 267 ~~~~~~~~~~~~ad~~l~~s~~e~~~~~~~Ea~~~g~PvI~~~~~~~~~~i~~~~~g~~~~~~~~-~~~~~i~~l~~~~~ 345 (374)
T cd03817 267 VPREELPDYYKAADLFVFASTTETQGLVLLEAMAAGLPVVAVDAPGLPDLVADGENGFLFPPGDE-ALAEALLRLLQDPE 345 (374)
T ss_pred CChHHHHHHHHHcCEEEecccccCcChHHHHHHHcCCcEEEeCCCChhhheecCceeEEeCCCCH-HHHHHHHHHHhChH
Confidence 999999999999999999999998721 2222 4567777766666655 36899999888 99999999998765
Q ss_pred HHHHHHHHHHhhhhccCC
Q 044635 497 QEKQLRHEKHYRYVSTHD 514 (831)
Q Consensus 497 ~er~~r~~~~~~~v~~~~ 514 (831)
. ++...+..++++.+++
T Consensus 346 ~-~~~~~~~~~~~~~~~~ 362 (374)
T cd03817 346 L-RRRLSKNAEESAEKFS 362 (374)
T ss_pred H-HHHHHHHHHHHHHHHH
Confidence 4 3445556666666654
No 78
>cd03799 GT1_amsK_like This is a family of GT1 glycosyltransferases found specifically in certain bacteria. amsK in Erwinia amylovora, has been reported to be involved in the biosynthesis of amylovoran, a exopolysaccharide acting as a virulence factor.
Probab=99.69 E-value=4.9e-15 Score=163.78 Aligned_cols=259 Identities=15% Similarity=0.133 Sum_probs=176.0
Q ss_pred CEEEEeCccccchHHHHHhhcCCCeEEEEEeccCCChHHhhcCCChHHHHHHHhcCCeEeecCHHhHHHHHHHHHHHhCC
Q 044635 203 DFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYKTLPIREEILRALLNSDLIGFHTFDYARHFLSCCSRMLGL 282 (831)
Q Consensus 203 d~vwvhDyhL~llp~~lr~~~~~~~i~~flH~PfP~~e~f~~lp~r~eil~~ll~~dligf~t~~~~~~Fl~~~~r~l~~ 282 (831)
|+|++|..+...+..++..+....+..+.+|.+-..... ....+.+.+-.+|.+-..+....+.+.+. .
T Consensus 81 Dii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~vi~~s~~~~~~l~~~----~-- 149 (355)
T cd03799 81 DHIHAHFGTTPATVAMLASRLGGIPYSFTAHGKDIFRSP-----DAIDLDEKLARADFVVAISEYNRQQLIRL----L-- 149 (355)
T ss_pred CEEEECCCCchHHHHHHHHHhcCCCEEEEEecccccccC-----chHHHHHHHhhCCEEEECCHHHHHHHHHh----c--
Confidence 899999876666666666666678899999853221111 11234445557999999888777665431 0
Q ss_pred eecccCceeeEEEcCEEEEEEEeecccChHHHHHhhCCcchHHHHHHHHHHhccCCcEEEEeccCcccccCHHHHHHHHH
Q 044635 283 TYESKRGYIGLEYYGRTVSIKILPVGIHMGQLQSVLSLPGTEAKVSELIKQFHDQGKVMLLGVDDMDIFKGISLKLLAME 362 (831)
Q Consensus 283 ~~~~~~~~~~~~~~gr~~~i~v~P~GId~~~~~~~~~~~~~~~~~~~lr~~~~~~~~~iil~VdRld~~KGi~~~l~A~~ 362 (831)
+....++.++|+|+|...+.... ... ..++..|+++||+.+.||++.+++|++
T Consensus 150 -------------~~~~~~~~vi~~~~d~~~~~~~~------------~~~--~~~~~~i~~~g~~~~~k~~~~l~~~~~ 202 (355)
T cd03799 150 -------------GCDPDKIHVVHCGVDLERFPPRP------------PPP--PGEPLRILSVGRLVEKKGLDYLLEALA 202 (355)
T ss_pred -------------CCCcccEEEEeCCcCHHHcCCcc------------ccc--cCCCeEEEEEeeeccccCHHHHHHHHH
Confidence 12234678899999988774211 011 256778999999999999999999999
Q ss_pred HHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhccCCCCCCccEEEecCCCCHHHHHHHHHHcCEeEEC
Q 044635 363 QLLIQHPEWQGKVVLVQIANPARGRGKDVKEVQAETYSTVERINQTFGKPGYDPVVLIDEPLKFYERIAYYVVAECCLVT 442 (831)
Q Consensus 363 ~lL~~~P~~~~~vvLvqig~p~r~~~~~~~~l~~~i~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv~vvt 442 (831)
++.+++|+++ |+++|. ++...+ +.+.+.+. ++.+.+.+.+.++.+++.++|+.||++++|
T Consensus 203 ~l~~~~~~~~----l~i~G~-----~~~~~~----~~~~~~~~-------~~~~~v~~~g~~~~~~l~~~~~~adi~l~~ 262 (355)
T cd03799 203 LLKDRGIDFR----LDIVGD-----GPLRDE----LEALIAEL-------GLEDRVTLLGAKSQEEVRELLRAADLFVLP 262 (355)
T ss_pred HHhhcCCCeE----EEEEEC-----CccHHH----HHHHHHHc-------CCCCeEEECCcCChHHHHHHHHhCCEEEec
Confidence 9987766654 888883 233223 33333332 222456677899999999999999999999
Q ss_pred CCc------cCCCC---CCCC-CceEEEeccccccccc---CCCceeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHhhh
Q 044635 443 AVR------DGSEP---SSPK-KSMLVVSEFIGCSPSL---SGAIRVNPWNIDAVSDAMDSALEMADQEKQLRHEKHYRY 509 (831)
Q Consensus 443 S~~------eGma~---~~~~-~g~lVlSe~~G~~~~l---~~allVnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~ 509 (831)
|.. ||+.. ++.. +.|+|+|...|..+.+ .+|++++|.|+++++++|.++++.+.. +....+..++.
T Consensus 263 s~~~~~~~~e~~~~~~~Ea~a~G~Pvi~~~~~~~~~~i~~~~~g~~~~~~~~~~l~~~i~~~~~~~~~-~~~~~~~a~~~ 341 (355)
T cd03799 263 SVTAADGDREGLPVVLMEAMAMGLPVISTDVSGIPELVEDGETGLLVPPGDPEALADAIERLLDDPEL-RREMGEAGRAR 341 (355)
T ss_pred ceecCCCCccCccHHHHHHHHcCCCEEecCCCCcchhhhCCCceEEeCCCCHHHHHHHHHHHHhCHHH-HHHHHHHHHHH
Confidence 999 99821 2222 4577777765555555 258999999999999999999986543 44444555666
Q ss_pred h-ccCCHHHHHH
Q 044635 510 V-STHDVGYWAR 520 (831)
Q Consensus 510 v-~~~~~~~W~~ 520 (831)
+ ..+++...++
T Consensus 342 ~~~~~s~~~~~~ 353 (355)
T cd03799 342 VEEEFDIRKQAA 353 (355)
T ss_pred HHHhcCHHHHhh
Confidence 5 4466555443
No 79
>cd03805 GT1_ALG2_like This family is most closely related to the GT1 family of glycosyltransferases. ALG2, a 1,3-mannosyltransferase, in yeast catalyzes the mannosylation of Man(2)GlcNAc(2)-dolichol diphosphate and Man(1)GlcNAc(2)-dolichol diphosphate to form Man(3)GlcNAc(2)-dolichol diphosphate. A deficiency of this enzyme causes an abnormal accumulation of Man1GlcNAc2-PP-dolichol and Man2GlcNAc2-PP-dolichol, which is associated with a type of congenital disorders of glycosylation (CDG), designated CDG-Ii, in humans.
Probab=99.69 E-value=6.8e-15 Score=165.89 Aligned_cols=275 Identities=15% Similarity=0.104 Sum_probs=173.0
Q ss_pred CCEEEEeCccccchHHHHHhhcCCCeEEEEEeccCCChHHhhcCCChHHHHH---------HHhcCCeEeecCHHhHHHH
Q 044635 202 DDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYKTLPIREEILR---------ALLNSDLIGFHTFDYARHF 272 (831)
Q Consensus 202 ~d~vwvhDyhL~llp~~lr~~~~~~~i~~flH~PfP~~e~f~~lp~r~eil~---------~ll~~dligf~t~~~~~~F 272 (831)
.|+|.+|+.... ++ +++. ....++.|.+| ||.......-.+...+.+ .+-.+|.|...+......+
T Consensus 95 ~Dvi~~~~~~~~-~~-~~~~-~~~~~~i~~~h--~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~ii~~s~~~~~~~ 169 (392)
T cd03805 95 YDVFIVDQVSAC-VP-LLKL-FSPSKILFYCH--FPDQLLAQRGSLLKRLYRKPFDWLEEFTTGMADKIVVNSNFTASVF 169 (392)
T ss_pred CCEEEEcCcchH-HH-HHHH-hcCCcEEEEEe--cChHHhcCCCcHHHHHHHHHHHHHHHHHhhCceEEEEcChhHHHHH
Confidence 489998876543 22 2332 22388999999 443322111111111111 1334788777665444433
Q ss_pred HHHHHHHhCCeecccCceeeEEEcCEEEEEEEeecccChHHHHHhhCCcchHHHHHHHHHHhc-cCCcEEEEeccCcccc
Q 044635 273 LSCCSRMLGLTYESKRGYIGLEYYGRTVSIKILPVGIHMGQLQSVLSLPGTEAKVSELIKQFH-DQGKVMLLGVDDMDIF 351 (831)
Q Consensus 273 l~~~~r~l~~~~~~~~~~~~~~~~gr~~~i~v~P~GId~~~~~~~~~~~~~~~~~~~lr~~~~-~~~~~iil~VdRld~~ 351 (831)
... ++. .....+.++|+|+|.+.|.+....+ .++... ..++.+|+++||+.+.
T Consensus 170 ~~~----~~~--------------~~~~~~~vi~n~vd~~~~~~~~~~~--------~~~~~~~~~~~~~i~~~grl~~~ 223 (392)
T cd03805 170 KKT----FPS--------------LAKNPREVVYPCVDTDSFESTSEDP--------DPGLLIPKSGKKTFLSINRFERK 223 (392)
T ss_pred HHH----hcc--------------cccCCcceeCCCcCHHHcCcccccc--------cccccccCCCceEEEEEeeeccc
Confidence 321 110 0111235789999998875321110 111112 3678899999999999
Q ss_pred cCHHHHHHHHHHHHHhC---CCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHH-HhccCCCCCCccEEEecCCCCHH
Q 044635 352 KGISLKLLAMEQLLIQH---PEWQGKVVLVQIANPARGRGKDVKEVQAETYSTVER-INQTFGKPGYDPVVLIDEPLKFY 427 (831)
Q Consensus 352 KGi~~~l~A~~~lL~~~---P~~~~~vvLvqig~p~r~~~~~~~~l~~~i~~lv~~-IN~~~g~~~~~pv~~~~~~v~~~ 427 (831)
||++.+++|++++.++. |+++ |+.+|..... .....++.+++.+++++ .+ ...-+.+.|.++.+
T Consensus 224 Kg~~~ll~a~~~l~~~~~~~~~~~----l~i~G~~~~~-~~~~~~~~~~l~~~~~~~~~-------l~~~V~f~g~~~~~ 291 (392)
T cd03805 224 KNIALAIEAFAILKDKLAEFKNVR----LVIAGGYDPR-VAENVEYLEELQRLAEELLL-------LEDQVIFLPSISDS 291 (392)
T ss_pred CChHHHHHHHHHHHhhcccccCeE----EEEEcCCCCC-CchhHHHHHHHHHHHHHhcC-------CCceEEEeCCCChH
Confidence 99999999999998877 6554 8888854321 12223445566666554 21 22344456789999
Q ss_pred HHHHHHHHcCEeEECCCccCCCC---CCCC-CceEEEeccccccccc---CCCceeCCCCHHHHHHHHHHHhcCCHHHHH
Q 044635 428 ERIAYYVVAECCLVTAVRDGSEP---SSPK-KSMLVVSEFIGCSPSL---SGAIRVNPWNIDAVSDAMDSALEMADQEKQ 500 (831)
Q Consensus 428 el~aly~~ADv~vvtS~~eGma~---~~~~-~g~lVlSe~~G~~~~l---~~allVnP~d~~~~A~ai~~aL~m~~~er~ 500 (831)
++..+|+.||++++||..||+.. ++.. +.|+|+|...|..+.+ .+|++++| |++++|++|.++++.++ +++
T Consensus 292 ~~~~~l~~ad~~l~~s~~E~~g~~~lEAma~G~PvI~s~~~~~~e~i~~~~~g~~~~~-~~~~~a~~i~~l~~~~~-~~~ 369 (392)
T cd03805 292 QKELLLSSARALLYTPSNEHFGIVPLEAMYAGKPVIACNSGGPLETVVDGETGFLCEP-TPEEFAEAMLKLANDPD-LAD 369 (392)
T ss_pred HHHHHHhhCeEEEECCCcCCCCchHHHHHHcCCCEEEECCCCcHHHhccCCceEEeCC-CHHHHHHHHHHHHhChH-HHH
Confidence 99999999999999999998821 2333 4577777777766666 25788877 99999999999998664 455
Q ss_pred HHHHHHhhhh-ccCCHHHHHHH
Q 044635 501 LRHEKHYRYV-STHDVGYWARS 521 (831)
Q Consensus 501 ~r~~~~~~~v-~~~~~~~W~~~ 521 (831)
...++.++++ .++++..++++
T Consensus 370 ~~~~~a~~~~~~~~s~~~~~~~ 391 (392)
T cd03805 370 RMGAAGRKRVKEKFSTEAFAER 391 (392)
T ss_pred HHHHHHHHHHHHhcCHHHHhhh
Confidence 5555666665 55777766654
No 80
>cd03822 GT1_ecORF704_like This family is most closely related to the GT1 family of glycosyltransferases. ORF704 in E. coli has been shown to be involved in the biosynthesis of O-specific mannose homopolysaccharides.
Probab=99.68 E-value=3.8e-15 Score=164.70 Aligned_cols=274 Identities=18% Similarity=0.178 Sum_probs=177.7
Q ss_pred CEEEEeCccccchHH---HHH--hhcCCCeEEEEEeccCCChHHhhcCCChHHHHHHHhcCCeEeecCHHhHHHHHHHHH
Q 044635 203 DFVWVHDYHLMVLPT---FLR--KRFNRVKLGFFLHSPFPSSEIYKTLPIREEILRALLNSDLIGFHTFDYARHFLSCCS 277 (831)
Q Consensus 203 d~vwvhDyhL~llp~---~lr--~~~~~~~i~~flH~PfP~~e~f~~lp~r~eil~~ll~~dligf~t~~~~~~Fl~~~~ 277 (831)
|+|.+|+++-...|. .+. .+..+.|+.+.+|.+.|...... ...-.-..+-.+|.|-+.+.+.++++....
T Consensus 78 dii~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~---~~~~~~~~~~~~d~ii~~s~~~~~~~~~~~- 153 (366)
T cd03822 78 DVVVIQHEYGIFGGEAGLYLLLLLRGLGIPVVVTLHTVLLHEPRPG---DRALLRLLLRRADAVIVMSSELLRALLLRA- 153 (366)
T ss_pred CEEEEeeccccccchhhHHHHHHHhhcCCCEEEEEecCCccccchh---hhHHHHHHHhcCCEEEEeeHHHHHHHHhhc-
Confidence 899998733221111 111 12367899999998622221111 111222233458999888755555554310
Q ss_pred HHhCCeecccCceeeEEEcCEEEEEEEeecccChHHHHHhhCCcchHHHHHHHHHHhccCCcEEEEeccCcccccCHHHH
Q 044635 278 RMLGLTYESKRGYIGLEYYGRTVSIKILPVGIHMGQLQSVLSLPGTEAKVSELIKQFHDQGKVMLLGVDDMDIFKGISLK 357 (831)
Q Consensus 278 r~l~~~~~~~~~~~~~~~~gr~~~i~v~P~GId~~~~~~~~~~~~~~~~~~~lr~~~~~~~~~iil~VdRld~~KGi~~~ 357 (831)
...++.++|+|++...+.... . . ++.....++.+|+++||+.+.||+..+
T Consensus 154 --------------------~~~~~~~i~~~~~~~~~~~~~------~-~---~~~~~~~~~~~i~~~G~~~~~K~~~~l 203 (366)
T cd03822 154 --------------------YPEKIAVIPHGVPDPPAEPPE------S-L---KALGGLDGRPVLLTFGLLRPYKGLELL 203 (366)
T ss_pred --------------------CCCcEEEeCCCCcCcccCCch------h-h---HhhcCCCCCeEEEEEeeccCCCCHHHH
Confidence 024677899999976653210 1 1 122113678899999999999999999
Q ss_pred HHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhccCCCCCCccEEEecCCCCHHHHHHHHHHcC
Q 044635 358 LLAMEQLLIQHPEWQGKVVLVQIANPARGRGKDVKEVQAETYSTVERINQTFGKPGYDPVVLIDEPLKFYERIAYYVVAE 437 (831)
Q Consensus 358 l~A~~~lL~~~P~~~~~vvLvqig~p~r~~~~~~~~l~~~i~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~AD 437 (831)
++|++.+.+++|+++ |+++|... +.....+.+..+++.+. +.. ..|.+..+.++.+++..+|+.||
T Consensus 204 l~a~~~~~~~~~~~~----l~i~G~~~----~~~~~~~~~~~~~i~~~----~~~--~~v~~~~~~~~~~~~~~~~~~ad 269 (366)
T cd03822 204 LEALPLLVAKHPDVR----LLVAGETH----PDLERYRGEAYALAERL----GLA--DRVIFINRYLPDEELPELFSAAD 269 (366)
T ss_pred HHHHHHHHhhCCCeE----EEEeccCc----cchhhhhhhhHhHHHhc----CCC--CcEEEecCcCCHHHHHHHHhhcC
Confidence 999999998888765 88888422 11111111111222222 111 13555555599999999999999
Q ss_pred EeEECCCcc--CCCC---CCCC-CceEEEeccccccccc---CCCceeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHhh
Q 044635 438 CCLVTAVRD--GSEP---SSPK-KSMLVVSEFIGCSPSL---SGAIRVNPWNIDAVSDAMDSALEMADQEKQLRHEKHYR 508 (831)
Q Consensus 438 v~vvtS~~e--Gma~---~~~~-~g~lVlSe~~G~~~~l---~~allVnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~ 508 (831)
++++||..| |+.. ++.. +.|+|+|...| .+++ .+|++++|.|++++|++|..+++.+ +++....++.++
T Consensus 270 ~~v~ps~~e~~~~~~~~~Ea~a~G~PvI~~~~~~-~~~i~~~~~g~~~~~~d~~~~~~~l~~l~~~~-~~~~~~~~~~~~ 347 (366)
T cd03822 270 VVVLPYRSADQTQSGVLAYAIGFGKPVISTPVGH-AEEVLDGGTGLLVPPGDPAALAEAIRRLLADP-ELAQALRARARE 347 (366)
T ss_pred EEEecccccccccchHHHHHHHcCCCEEecCCCC-hheeeeCCCcEEEcCCCHHHHHHHHHHHHcCh-HHHHHHHHHHHH
Confidence 999999999 8721 2222 44777777666 6666 4689999999999999999999854 445555667788
Q ss_pred hhccCCHHHHHHHHHHHH
Q 044635 509 YVSTHDVGYWARSFLQDL 526 (831)
Q Consensus 509 ~v~~~~~~~W~~~~l~~l 526 (831)
++.++++..+++++.+-+
T Consensus 348 ~~~~~s~~~~~~~~~~~~ 365 (366)
T cd03822 348 YARAMSWERVAERYLRLL 365 (366)
T ss_pred HHhhCCHHHHHHHHHHHh
Confidence 888899999998877643
No 81
>cd03821 GT1_Bme6_like This family is most closely related to the GT1 family of glycosyltransferases. Bme6 in Brucella melitensis has been shown to be involved in the biosynthesis of a polysaccharide.
Probab=99.68 E-value=6e-15 Score=162.61 Aligned_cols=273 Identities=18% Similarity=0.189 Sum_probs=173.0
Q ss_pred CCEEEEeCcc-ccchHHHHHhhcCCCeEEEEEeccCCChHHhhcCCChHH------HHHHHhcCCeEeecCHHhHHHHHH
Q 044635 202 DDFVWVHDYH-LMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYKTLPIREE------ILRALLNSDLIGFHTFDYARHFLS 274 (831)
Q Consensus 202 ~d~vwvhDyh-L~llp~~lr~~~~~~~i~~flH~PfP~~e~f~~lp~r~e------il~~ll~~dligf~t~~~~~~Fl~ 274 (831)
.|+|++|+.. ....+.....+..+.++.+..|-.++...... -+.+.. .-..+-.+|.+.+.+.........
T Consensus 88 ~dii~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~s~~~~~~~~~ 166 (375)
T cd03821 88 ADIVHVHGLWSYPSLAAARAARKYGIPYVVSPHGMLDPWALPH-KALKKRLAWFLFERRLLQAAAAVHATSEQEAAEIRR 166 (375)
T ss_pred CCEEEEecccchHHHHHHHHHHHhCCCEEEEcccccccccccc-chhhhHHHHHHHHHHHHhcCCEEEECCHHHHHHHHh
Confidence 4899999843 33333332233457889999997665443100 011111 112233466666665433322211
Q ss_pred HHHHHhCCeecccCceeeEEEcCEEEEEEEeecccChHHHHHhhCCcchHHHHHHHHHHhc-cCCcEEEEeccCcccccC
Q 044635 275 CCSRMLGLTYESKRGYIGLEYYGRTVSIKILPVGIHMGQLQSVLSLPGTEAKVSELIKQFH-DQGKVMLLGVDDMDIFKG 353 (831)
Q Consensus 275 ~~~r~l~~~~~~~~~~~~~~~~gr~~~i~v~P~GId~~~~~~~~~~~~~~~~~~~lr~~~~-~~~~~iil~VdRld~~KG 353 (831)
.+...++.++|+|+|.+.+..... . .. ++.++ ..++++++++||+++.||
T Consensus 167 ---------------------~~~~~~~~vi~~~~~~~~~~~~~~-----~--~~-~~~~~~~~~~~~i~~~G~~~~~K~ 217 (375)
T cd03821 167 ---------------------LGLKAPIAVIPNGVDIPPFAALPS-----R--GR-RRKFPILPDKRIILFLGRLHPKKG 217 (375)
T ss_pred ---------------------hCCcccEEEcCCCcChhccCcchh-----h--hh-hhhccCCCCCcEEEEEeCcchhcC
Confidence 122346788999999987743211 1 11 45554 467889999999999999
Q ss_pred HHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhccCCCCCCccEEEecCCCCHHHHHHHH
Q 044635 354 ISLKLLAMEQLLIQHPEWQGKVVLVQIANPARGRGKDVKEVQAETYSTVERINQTFGKPGYDPVVLIDEPLKFYERIAYY 433 (831)
Q Consensus 354 i~~~l~A~~~lL~~~P~~~~~vvLvqig~p~r~~~~~~~~l~~~i~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~aly 433 (831)
+..+++|+.++.+++|+++ |+++|... . .+ ...+..++.+. +..+.+.+.|.++.+++..+|
T Consensus 218 ~~~li~a~~~l~~~~~~~~----l~i~G~~~---~-~~---~~~~~~~~~~~-------~~~~~v~~~g~~~~~~~~~~~ 279 (375)
T cd03821 218 LDLLIEAFAKLAERFPDWH----LVIAGPDE---G-GY---RAELKQIAAAL-------GLEDRVTFTGMLYGEDKAAAL 279 (375)
T ss_pred HHHHHHHHHHhhhhcCCeE----EEEECCCC---c-ch---HHHHHHHHHhc-------CccceEEEcCCCChHHHHHHH
Confidence 9999999999998888766 88888421 1 12 12222222221 222445567899999999999
Q ss_pred HHcCEeEECCCccCCCC---CCCC-CceEEEecccccccccC-CCceeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHhh
Q 044635 434 VVAECCLVTAVRDGSEP---SSPK-KSMLVVSEFIGCSPSLS-GAIRVNPWNIDAVSDAMDSALEMADQEKQLRHEKHYR 508 (831)
Q Consensus 434 ~~ADv~vvtS~~eGma~---~~~~-~g~lVlSe~~G~~~~l~-~allVnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~ 508 (831)
+.||++++||..||+.. ++.. +.|+|+|...|..+.+. +...+.|.+.++++++|.++++++ +++....++.++
T Consensus 280 ~~adv~v~ps~~e~~~~~~~Eama~G~PvI~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~-~~~~~~~~~~~~ 358 (375)
T cd03821 280 ADADLFVLPSHSENFGIVVAEALACGTPVVTTDKVPWQELIEYGCGWVVDDDVDALAAALRRALELP-QRLKAMGENGRA 358 (375)
T ss_pred hhCCEEEeccccCCCCcHHHHHHhcCCCEEEcCCCCHHHHhhcCceEEeCCChHHHHHHHHHHHhCH-HHHHHHHHHHHH
Confidence 99999999999999832 2222 45777777777666662 333344556799999999999877 555555666666
Q ss_pred h-hccCCHHHHHHHHH
Q 044635 509 Y-VSTHDVGYWARSFL 523 (831)
Q Consensus 509 ~-v~~~~~~~W~~~~l 523 (831)
+ ...+++..-+++++
T Consensus 359 ~~~~~~s~~~~~~~~~ 374 (375)
T cd03821 359 LVEERFSWTAIAQQLL 374 (375)
T ss_pred HHHHhcCHHHHHHHhh
Confidence 6 56677776666554
No 82
>PLN02949 transferase, transferring glycosyl groups
Probab=99.68 E-value=1.4e-14 Score=166.38 Aligned_cols=309 Identities=13% Similarity=0.110 Sum_probs=197.7
Q ss_pred hhccccccccccCCCCCCCCCCccChhhHHHHHHHHHHHHHHHHHHcCCCCCEEEEeCcc-ccchHHHHHhhcCCCeEEE
Q 044635 152 FCKQQLWPLFHYMLPLSPDLGGRFNRSLWQAYVSVNKIFADRIMEVINPEDDFVWVHDYH-LMVLPTFLRKRFNRVKLGF 230 (831)
Q Consensus 152 f~~~~lWp~~H~~~~~~~~~~~~~~~~~w~~Y~~vN~~fa~~i~~~~~~~~d~vwvhDyh-L~llp~~lr~~~~~~~i~~ 230 (831)
+-..-.||-||.+. ..-...|-++..+.+ +. |.|||-==- ...+| ++| +...||+|
T Consensus 109 ~~~~~~~~~~t~~~--------~~~~~~~l~~~~~~~---------~~---p~v~vDt~~~~~~~p-l~~--~~~~~v~~ 165 (463)
T PLN02949 109 WIEEETYPRFTMIG--------QSLGSVYLAWEALCK---------FT---PLYFFDTSGYAFTYP-LAR--LFGCKVVC 165 (463)
T ss_pred ccccccCCceehHH--------HHHHHHHHHHHHHHh---------cC---CCEEEeCCCcccHHH-HHH--hcCCcEEE
Confidence 33455678777652 223567777766654 12 348874111 12223 344 34789999
Q ss_pred EEeccCCChHHhhcCCCh-------------------HH----H---H--HHHhcCCeEeecCHHhHHHHHHHHHHHhCC
Q 044635 231 FLHSPFPSSEIYKTLPIR-------------------EE----I---L--RALLNSDLIGFHTFDYARHFLSCCSRMLGL 282 (831)
Q Consensus 231 flH~PfP~~e~f~~lp~r-------------------~e----i---l--~~ll~~dligf~t~~~~~~Fl~~~~r~l~~ 282 (831)
.+|-|--+.+....+-.+ +. + + ..+-.+|.|-..+..-.+++.+. .+
T Consensus 166 yvH~p~~~~dm~~~v~~~~~~~~~~~~~a~~~~~~~~k~~Y~~~~~~l~~~~~~~ad~ii~nS~~t~~~l~~~----~~- 240 (463)
T PLN02949 166 YTHYPTISSDMISRVRDRSSMYNNDASIARSFWLSTCKILYYRAFAWMYGLVGRCAHLAMVNSSWTKSHIEAL----WR- 240 (463)
T ss_pred EEeCCcchHHHHHHHhhcccccCccchhhccchhHHHHHHHHHHHHHHHHHHcCCCCEEEECCHHHHHHHHHH----cC-
Confidence 999665566444432110 00 0 0 01135687777766555555321 11
Q ss_pred eecccCceeeEEEcCEEEEEEEeecccChHHHHHhhCCcchHHHHHHHHHHhccCCcEEEEeccCcccccCHHHHHHHHH
Q 044635 283 TYESKRGYIGLEYYGRTVSIKILPVGIHMGQLQSVLSLPGTEAKVSELIKQFHDQGKVMLLGVDDMDIFKGISLKLLAME 362 (831)
Q Consensus 283 ~~~~~~~~~~~~~~gr~~~i~v~P~GId~~~~~~~~~~~~~~~~~~~lr~~~~~~~~~iil~VdRld~~KGi~~~l~A~~ 362 (831)
...++.++++|+|...+... +. +.. .++++++++||+.+.||+..+|+||.
T Consensus 241 ---------------~~~~i~vvyp~vd~~~~~~~---~~---------~~~--~~~~~il~vGR~~~~Kg~~llI~A~~ 291 (463)
T PLN02949 241 ---------------IPERIKRVYPPCDTSGLQAL---PL---------ERS--EDPPYIISVAQFRPEKAHALQLEAFA 291 (463)
T ss_pred ---------------CCCCeEEEcCCCCHHHcccC---Cc---------ccc--CCCCEEEEEEeeeccCCHHHHHHHHH
Confidence 11245678889998766211 10 011 34578999999999999999999999
Q ss_pred HHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhccCCCCCCccEEEecCCCCHHHHHHHHHHcCEeEEC
Q 044635 363 QLLIQHPEWQGKVVLVQIANPARGRGKDVKEVQAETYSTVERINQTFGKPGYDPVVLIDEPLKFYERIAYYVVAECCLVT 442 (831)
Q Consensus 363 ~lL~~~P~~~~~vvLvqig~p~r~~~~~~~~l~~~i~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv~vvt 442 (831)
+++++.++-.-++.|+++|... .++..++.+++++++++.+ .+..+.|.+.++.+++.++|+.||+++.|
T Consensus 292 ~l~~~~~~~~~~~~LvIvG~~~---~~~~~~~~~eL~~la~~l~-------L~~~V~f~g~v~~~el~~ll~~a~~~v~~ 361 (463)
T PLN02949 292 LALEKLDADVPRPKLQFVGSCR---NKEDEERLQKLKDRAKELG-------LDGDVEFHKNVSYRDLVRLLGGAVAGLHS 361 (463)
T ss_pred HHHHhccccCCCcEEEEEeCCC---CcccHHHHHHHHHHHHHcC-------CCCcEEEeCCCCHHHHHHHHHhCcEEEeC
Confidence 9987543211234599999542 1222334456666665532 22334456789999999999999999999
Q ss_pred CCccCCC---CCCCCCc-eEEEeccccccccc-C------CCceeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHhhhhc
Q 044635 443 AVRDGSE---PSSPKKS-MLVVSEFIGCSPSL-S------GAIRVNPWNIDAVSDAMDSALEMADQEKQLRHEKHYRYVS 511 (831)
Q Consensus 443 S~~eGma---~~~~~~g-~lVlSe~~G~~~~l-~------~allVnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~ 511 (831)
|..|||+ .+++..| |+|++..+|..+++ . +|++++ |++++|++|.++++++++++.+..++.++.+.
T Consensus 362 s~~E~FGivvlEAMA~G~PVIa~~~gGp~~eIV~~~~~g~tG~l~~--~~~~la~ai~~ll~~~~~~r~~m~~~ar~~~~ 439 (463)
T PLN02949 362 MIDEHFGISVVEYMAAGAVPIAHNSAGPKMDIVLDEDGQQTGFLAT--TVEEYADAILEVLRMRETERLEIAAAARKRAN 439 (463)
T ss_pred CccCCCChHHHHHHHcCCcEEEeCCCCCcceeeecCCCCcccccCC--CHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHH
Confidence 9999983 2444445 78888877765333 1 367764 89999999999999887777777777888888
Q ss_pred cCCHHHHHHHHHHHHHHH
Q 044635 512 THDVGYWARSFLQDLERT 529 (831)
Q Consensus 512 ~~~~~~W~~~~l~~l~~~ 529 (831)
+++....++++++.+...
T Consensus 440 ~FS~e~~~~~~~~~i~~l 457 (463)
T PLN02949 440 RFSEQRFNEDFKDAIRPI 457 (463)
T ss_pred HcCHHHHHHHHHHHHHHH
Confidence 899988888887777654
No 83
>PRK15490 Vi polysaccharide biosynthesis protein TviE; Provisional
Probab=99.67 E-value=6.2e-15 Score=167.95 Aligned_cols=288 Identities=9% Similarity=0.037 Sum_probs=173.5
Q ss_pred HHHcCCCCCEEEEeCccccchHHHHHhhcCCCeE-EEEEeccCCChHHhhcCCChHHHHHHHhcCCeEeecCHHhHHHHH
Q 044635 195 MEVINPEDDFVWVHDYHLMVLPTFLRKRFNRVKL-GFFLHSPFPSSEIYKTLPIREEILRALLNSDLIGFHTFDYARHFL 273 (831)
Q Consensus 195 ~~~~~~~~d~vwvhDyhL~llp~~lr~~~~~~~i-~~flH~PfP~~e~f~~lp~r~eil~~ll~~dligf~t~~~~~~Fl 273 (831)
+...+| |+|..|++.-.++..+.... ..+++ ....|. ++...--+.+-.. .+.+..++++.-.+. ++.+..
T Consensus 276 ir~~rp--DIVHt~~~~a~l~g~laA~l-agvpviv~~~h~-~~~~~~~r~~~~e---~~~~~~a~~i~~~sd-~v~~s~ 347 (578)
T PRK15490 276 LCERKL--DYLSVWQDGACLMIALAALI-AGVPRIQLGLRG-LPPVVRKRLFKPE---YEPLYQALAVVPGVD-FMSNNH 347 (578)
T ss_pred HHHcCC--CEEEEcCcccHHHHHHHHHh-cCCCEEEEeecc-cCCcchhhHHHHH---HHHhhhhceeEecch-hhhccH
Confidence 344466 89999999976665555443 34555 344565 3322111111000 112333455433332 333332
Q ss_pred HHHHHHhCCeecccCceeeEEEcCEEEEEEEeecccChHHHHHhhCCcchHHHHHHHHHHhccCCcEEEEeccCcccccC
Q 044635 274 SCCSRMLGLTYESKRGYIGLEYYGRTVSIKILPVGIHMGQLQSVLSLPGTEAKVSELIKQFHDQGKVMLLGVDDMDIFKG 353 (831)
Q Consensus 274 ~~~~r~l~~~~~~~~~~~~~~~~gr~~~i~v~P~GId~~~~~~~~~~~~~~~~~~~lr~~~~~~~~~iil~VdRld~~KG 353 (831)
...+.+.. .++-...+|.++|+|||...|.+....+ ......++..+ +.+..+|++|+|+.+.||
T Consensus 348 ~v~~~l~~------------~lgip~~KI~VIyNGVD~~rf~p~~~~~--~~~r~~~~~~l-~~~~~vIg~VgRl~~~Kg 412 (578)
T PRK15490 348 CVTRHYAD------------WLKLEAKHFQVVYNGVLPPSTEPSSEVP--HKIWQQFTQKT-QDADTTIGGVFRFVGDKN 412 (578)
T ss_pred HHHHHHHH------------HhCCCHHHEEEEeCCcchhhcCccchhh--HHHHHHhhhcc-CCCCcEEEEEEEEehhcC
Confidence 21121100 0111344788999999998876432111 01112222223 245678999999999999
Q ss_pred HHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhccCCCCCCccEEEecCCCCHHHHHHHH
Q 044635 354 ISLKLLAMEQLLIQHPEWQGKVVLVQIANPARGRGKDVKEVQAETYSTVERINQTFGKPGYDPVVLIDEPLKFYERIAYY 433 (831)
Q Consensus 354 i~~~l~A~~~lL~~~P~~~~~vvLvqig~p~r~~~~~~~~l~~~i~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~aly 433 (831)
...+|+|+.++++++|+++ |+++| +|+.. +++++++.+.+ +.+-+.|.|. .+++..+|
T Consensus 413 ~~~LI~A~a~llk~~pdir----LvIVG-----dG~~~----eeLk~la~elg-------L~d~V~FlG~--~~Dv~~~L 470 (578)
T PRK15490 413 PFAWIDFAARYLQHHPATR----FVLVG-----DGDLR----AEAQKRAEQLG-------ILERILFVGA--SRDVGYWL 470 (578)
T ss_pred HHHHHHHHHHHHhHCCCeE----EEEEe-----CchhH----HHHHHHHHHcC-------CCCcEEECCC--hhhHHHHH
Confidence 9999999999999999866 88888 34433 34444444432 2233344555 56899999
Q ss_pred HHcCEeEECCCccCCC---CCCCC-CceEEEeccccccccc---CCCceeCCCCHHHHHHHHHHHhcCCH--HHHHHHHH
Q 044635 434 VVAECCLVTAVRDGSE---PSSPK-KSMLVVSEFIGCSPSL---SGAIRVNPWNIDAVSDAMDSALEMAD--QEKQLRHE 504 (831)
Q Consensus 434 ~~ADv~vvtS~~eGma---~~~~~-~g~lVlSe~~G~~~~l---~~allVnP~d~~~~A~ai~~aL~m~~--~er~~r~~ 504 (831)
+.||+||+||.+|||. .+++. +.|+|+|...|+.+.+ .+|++|+|.|++++++++..+..+.. .++....+
T Consensus 471 aaADVfVlPS~~EGfp~vlLEAMA~GlPVVATdvGG~~EiV~dG~nG~LVp~~D~~aLa~ai~lA~aL~~ll~~~~~mg~ 550 (578)
T PRK15490 471 QKMNVFILFSRYEGLPNVLIEAQMVGVPVISTPAGGSAECFIEGVSGFILDDAQTVNLDQACRYAEKLVNLWRSRTGICQ 550 (578)
T ss_pred HhCCEEEEcccccCccHHHHHHHHhCCCEEEeCCCCcHHHcccCCcEEEECCCChhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999982 12222 4578888887777766 46899999999999998854433222 22223335
Q ss_pred HHhhhh-ccCCHHHHHHHHHHHHH
Q 044635 505 KHYRYV-STHDVGYWARSFLQDLE 527 (831)
Q Consensus 505 ~~~~~v-~~~~~~~W~~~~l~~l~ 527 (831)
+.++++ .++++...++.+++-+.
T Consensus 551 ~ARe~V~e~FS~e~Mv~~y~ki~~ 574 (578)
T PRK15490 551 QTQSFLQERFTVEHMVGTFVKTIA 574 (578)
T ss_pred HHHHHHHhhCCHHHHHHHHHHHHH
Confidence 567766 45888888777766554
No 84
>cd03798 GT1_wlbH_like This family is most closely related to the GT1 family of glycosyltransferases. wlbH in Bordetella parapertussis has been shown to be required for the biosynthesis of a trisaccharide that, when attached to the B. pertussis lipopolysaccharide (LPS) core (band B), generates band A LPS.
Probab=99.67 E-value=8e-15 Score=160.98 Aligned_cols=274 Identities=19% Similarity=0.191 Sum_probs=183.7
Q ss_pred CCEEEEeCccccchHHHHHhhcCCCeEEEEEeccCCChHHhhcCCChHHHHHHHhcCCeEeecCHHhHHHHHHHHHHHhC
Q 044635 202 DDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYKTLPIREEILRALLNSDLIGFHTFDYARHFLSCCSRMLG 281 (831)
Q Consensus 202 ~d~vwvhDyhL~llp~~lr~~~~~~~i~~flH~PfP~~e~f~~lp~r~eil~~ll~~dligf~t~~~~~~Fl~~~~r~l~ 281 (831)
-|+|++|......+......+..+.++.+..|.+++....... ..+......+-.+|.+.+.+....+.|....
T Consensus 94 ~dii~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~~-~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~~----- 167 (377)
T cd03798 94 PDLIHAHFAYPDGFAAALLKRKLGIPLVVTLHGSDVNLLPRKR-LLRALLRRALRRADAVIAVSEALADELKALG----- 167 (377)
T ss_pred CCEEEEeccchHHHHHHHHHHhcCCCEEEEeecchhcccCchh-hHHHHHHHHHhcCCeEEeCCHHHHHHHHHhc-----
Confidence 3899999555444444444444557899999977764432221 1233344455678999998887776665311
Q ss_pred CeecccCceeeEEEcCEEEEEEEeecccChHHHHHhhCCcchHHHHHHHHHHhc-cCCcEEEEeccCcccccCHHHHHHH
Q 044635 282 LTYESKRGYIGLEYYGRTVSIKILPVGIHMGQLQSVLSLPGTEAKVSELIKQFH-DQGKVMLLGVDDMDIFKGISLKLLA 360 (831)
Q Consensus 282 ~~~~~~~~~~~~~~~gr~~~i~v~P~GId~~~~~~~~~~~~~~~~~~~lr~~~~-~~~~~iil~VdRld~~KGi~~~l~A 360 (831)
....++.++|+|+|...+..... ... +++. ..++..++++||+.+.||+..+++|
T Consensus 168 ---------------~~~~~~~~i~~~~~~~~~~~~~~-----~~~----~~~~~~~~~~~i~~~g~~~~~k~~~~li~~ 223 (377)
T cd03798 168 ---------------IDPEKVTVIPNGVDTERFSPADR-----AEA----RKLGLPEDKKVILFVGRLVPRKGIDYLIEA 223 (377)
T ss_pred ---------------CCCCceEEcCCCcCcccCCCcch-----HHH----HhccCCCCceEEEEeccCccccCHHHHHHH
Confidence 11236778999999877643211 111 2222 3578899999999999999999999
Q ss_pred HHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhccCCCCCCccEEEecCCCCHHHHHHHHHHcCEeE
Q 044635 361 MEQLLIQHPEWQGKVVLVQIANPARGRGKDVKEVQAETYSTVERINQTFGKPGYDPVVLIDEPLKFYERIAYYVVAECCL 440 (831)
Q Consensus 361 ~~~lL~~~P~~~~~vvLvqig~p~r~~~~~~~~l~~~i~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv~v 440 (831)
++.+.+++|+++ |+++|. ++....+++.+ +.. +..+.+.+.+.++.+++..+|+.||+++
T Consensus 224 ~~~~~~~~~~~~----l~i~g~-----~~~~~~~~~~~----~~~-------~~~~~v~~~g~~~~~~~~~~~~~ad~~i 283 (377)
T cd03798 224 LARLLKKRPDVH----LVIVGD-----GPLREALEALA----AEL-------GLEDRVTFLGAVPHEEVPAYYAAADVFV 283 (377)
T ss_pred HHHHHhcCCCeE----EEEEcC-----CcchHHHHHHH----Hhc-------CCcceEEEeCCCCHHHHHHHHHhcCeee
Confidence 999988777654 887773 23333333332 221 2334556678899999999999999999
Q ss_pred ECCCccCCCC---CC-CCCceEEEeccccccccc---CCCceeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHhhhhccC
Q 044635 441 VTAVRDGSEP---SS-PKKSMLVVSEFIGCSPSL---SGAIRVNPWNIDAVSDAMDSALEMADQEKQLRHEKHYRYVSTH 513 (831)
Q Consensus 441 vtS~~eGma~---~~-~~~g~lVlSe~~G~~~~l---~~allVnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~ 513 (831)
+||..||+.. ++ ..+.|+|+|...|..+.+ .+|++++|.|+++++++|.++++++.. ....+........+
T Consensus 284 ~~~~~~~~~~~~~Ea~~~G~pvI~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~i~~~~~~~~~--~~~~~~~~~~~~~~ 361 (377)
T cd03798 284 LPSLREGFGLVLLEAMACGLPVVATDVGGIPEIITDGENGLLVPPGDPEALAEAILRLLADPWL--RLGRAARRRVAERF 361 (377)
T ss_pred cchhhccCChHHHHHHhcCCCEEEecCCChHHHhcCCcceeEECCCCHHHHHHHHHHHhcCcHH--HHhHHHHHHHHHHh
Confidence 9999998821 22 225577888777766665 245899999999999999999987754 22223334445667
Q ss_pred CHHHHHHHHHHHHH
Q 044635 514 DVGYWARSFLQDLE 527 (831)
Q Consensus 514 ~~~~W~~~~l~~l~ 527 (831)
++..+++++.+-+.
T Consensus 362 s~~~~~~~~~~~~~ 375 (377)
T cd03798 362 SWENVAERLLELYR 375 (377)
T ss_pred hHHHHHHHHHHHHh
Confidence 77777777766554
No 85
>cd03807 GT1_WbnK_like This family is most closely related to the GT1 family of glycosyltransferases. WbnK in Shigella dysenteriae has been shown to be involved in the type 7 O-antigen biosynthesis.
Probab=99.67 E-value=1.1e-14 Score=159.80 Aligned_cols=278 Identities=14% Similarity=0.131 Sum_probs=181.0
Q ss_pred HcCCCCCEEEEeCccccchHHHHHhhcCCCeEEEEEeccCCChHHhhcCCChHHHHHHH-hcCCeEeecCHHhHHHHHHH
Q 044635 197 VINPEDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYKTLPIREEILRAL-LNSDLIGFHTFDYARHFLSC 275 (831)
Q Consensus 197 ~~~~~~d~vwvhDyhL~llp~~lr~~~~~~~i~~flH~PfP~~e~f~~lp~r~eil~~l-l~~dligf~t~~~~~~Fl~~ 275 (831)
..++ |+|.+|+++.......+.......++.+..|.-++... -...+....+.+-+ -.+|.+...+......+...
T Consensus 78 ~~~~--div~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~s~~~~~~~~~~ 154 (365)
T cd03807 78 RLRP--DVVHTWMYHADLYGGLAARLAGVPPVIWGIRHSDLDLG-KKSTRLVARLRRLLSSFIPLIVANSAAAAEYHQAI 154 (365)
T ss_pred hhCC--CEEEeccccccHHHHHHHHhcCCCcEEEEecCCccccc-chhHhHHHHHHHHhccccCeEEeccHHHHHHHHHc
Confidence 3455 89999999987777766665467889998887665432 00001111122111 13566655554433333220
Q ss_pred HHHHhCCeecccCceeeEEEcCEEEEEEEeecccChHHHHHhhCCcchHHHHHHHHHHhc-cCCcEEEEeccCcccccCH
Q 044635 276 CSRMLGLTYESKRGYIGLEYYGRTVSIKILPVGIHMGQLQSVLSLPGTEAKVSELIKQFH-DQGKVMLLGVDDMDIFKGI 354 (831)
Q Consensus 276 ~~r~l~~~~~~~~~~~~~~~~gr~~~i~v~P~GId~~~~~~~~~~~~~~~~~~~lr~~~~-~~~~~iil~VdRld~~KGi 354 (831)
+ ....++.++|+|+|...+..... .....+++++ +.++.+++++||+.+.||+
T Consensus 155 -----~---------------~~~~~~~vi~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~i~~~G~~~~~K~~ 208 (365)
T cd03807 155 -----G---------------YPPKKIVVIPNGVDTERFSPDLD------ARARLREELGLPEDTFLIGIVARLHPQKDH 208 (365)
T ss_pred -----C---------------CChhheeEeCCCcCHHhcCCccc------chHHHHHhcCCCCCCeEEEEecccchhcCH
Confidence 1 11235677899999887643211 1234456666 5678899999999999999
Q ss_pred HHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhccCCCCCCccEEEecCCCCHHHHHHHHH
Q 044635 355 SLKLLAMEQLLIQHPEWQGKVVLVQIANPARGRGKDVKEVQAETYSTVERINQTFGKPGYDPVVLIDEPLKFYERIAYYV 434 (831)
Q Consensus 355 ~~~l~A~~~lL~~~P~~~~~vvLvqig~p~r~~~~~~~~l~~~i~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~ 434 (831)
..+++|+..+.+++|+++ |+++|... ....++.... .. .+ ..+.+.+.+. .+++..+|+
T Consensus 209 ~~li~a~~~l~~~~~~~~----l~i~G~~~-----~~~~~~~~~~---~~----~~---~~~~v~~~g~--~~~~~~~~~ 267 (365)
T cd03807 209 ATLLRAAALLLKKFPNAR----LLLVGDGP-----DRANLELLAL---KE----LG---LEDKVILLGE--RSDVPALLN 267 (365)
T ss_pred HHHHHHHHHHHHhCCCeE----EEEecCCc-----chhHHHHHHH---Hh----cC---CCceEEEccc--cccHHHHHH
Confidence 999999999988888765 88888432 2222222221 11 11 2233444443 568999999
Q ss_pred HcCEeEECCCccCCCC---CCCC-CceEEEecccccccccC-CCceeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHhhh
Q 044635 435 VAECCLVTAVRDGSEP---SSPK-KSMLVVSEFIGCSPSLS-GAIRVNPWNIDAVSDAMDSALEMADQEKQLRHEKHYRY 509 (831)
Q Consensus 435 ~ADv~vvtS~~eGma~---~~~~-~g~lVlSe~~G~~~~l~-~allVnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~ 509 (831)
.||++++||..||+.. ++.. +.|+|+|...|..+.+. +|+++++.|+++++++|.++++.+ +++....+..+++
T Consensus 268 ~adi~v~ps~~e~~~~~~~Ea~a~g~PvI~~~~~~~~e~~~~~g~~~~~~~~~~l~~~i~~l~~~~-~~~~~~~~~~~~~ 346 (365)
T cd03807 268 ALDVFVLSSLSEGFPNVLLEAMACGLPVVATDVGDNAELVGDTGFLVPPGDPEALAEAIEALLADP-ALRQALGEAARER 346 (365)
T ss_pred hCCEEEeCCccccCCcHHHHHHhcCCCEEEcCCCChHHHhhcCCEEeCCCCHHHHHHHHHHHHhCh-HHHHHHHHHHHHH
Confidence 9999999999998821 2222 45778888777766664 589999999999999999999876 4555555666666
Q ss_pred hc-cCCHHHHHHHHHHH
Q 044635 510 VS-THDVGYWARSFLQD 525 (831)
Q Consensus 510 v~-~~~~~~W~~~~l~~ 525 (831)
+. .+++...++++.+-
T Consensus 347 ~~~~~s~~~~~~~~~~~ 363 (365)
T cd03807 347 IEENFSIEAMVEAYEEL 363 (365)
T ss_pred HHHhCCHHHHHHHHHHH
Confidence 64 47877777776653
No 86
>cd03793 GT1_Glycogen_synthase_GSY2_like Glycogen synthase, which is most closely related to the GT1 family of glycosyltransferases, catalyzes the transfer of a glucose molecule from UDP-glucose to a terminal branch of a glycogen molecule, a rate-limit step of glycogen biosynthesis. GSY2, the member of this family in S. cerevisiae, has been shown to possess glycogen synthase activity.
Probab=99.67 E-value=3.7e-15 Score=169.80 Aligned_cols=357 Identities=15% Similarity=0.162 Sum_probs=194.5
Q ss_pred ccccccccccCCCCCCCCCCccChhhHHHHHHHHHHHHHHHHHH-cCCCCCEEEEeCccccchHHHHHhhcCCCeEEEEE
Q 044635 154 KQQLWPLFHYMLPLSPDLGGRFNRSLWQAYVSVNKIFADRIMEV-INPEDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFL 232 (831)
Q Consensus 154 ~~~lWp~~H~~~~~~~~~~~~~~~~~w~~Y~~vN~~fa~~i~~~-~~~~~d~vwvhDyhL~llp~~lr~~~~~~~i~~fl 232 (831)
+.-||-.|+--. |.....+++..-=.|.. ..|-+...+. .....|++..||++-......||++.++++..|+.
T Consensus 105 ~~~lW~~~~i~s---~~~~~d~nea~~fgy~~--~~~i~~~~~~~~~~~~dViH~HeWm~g~a~~~lK~~~~~VptVfTt 179 (590)
T cd03793 105 KGELWELCGIGS---PEGDRETNDAIIFGFLV--AWFLGEFAEQFDDEPAVVAHFHEWQAGVGLPLLRKRKVDVSTIFTT 179 (590)
T ss_pred HHHHHHHcCCCC---CCCCCcchHHHHHHHHH--HHHHHHHHhhccCCCCeEEEEcchhHhHHHHHHHHhCCCCCEEEEe
Confidence 345899988643 32223344332223311 1222222222 11235899999999999999999999999999999
Q ss_pred eccCCChHHhhcCCCh-HHHHHHHhcCCeEeecC-------HHhHHHHHH-----HHHHHhCCeecccCceeeEEEcCEE
Q 044635 233 HSPFPSSEIYKTLPIR-EEILRALLNSDLIGFHT-------FDYARHFLS-----CCSRMLGLTYESKRGYIGLEYYGRT 299 (831)
Q Consensus 233 H~PfP~~e~f~~lp~r-~eil~~ll~~dligf~t-------~~~~~~Fl~-----~~~r~l~~~~~~~~~~~~~~~~gr~ 299 (831)
| +.++-|.|-.. ..+-. ++-.|.- .-+.++.++ .|+++..++..+.+. ..+.+++.
T Consensus 180 H----AT~~GR~l~~g~~~~y~-----~l~~~~~d~eA~~~~I~~r~~iE~~aa~~Ad~fttVS~it~~E--~~~Ll~~~ 248 (590)
T cd03793 180 H----ATLLGRYLCAGNVDFYN-----NLDYFDVDKEAGKRGIYHRYCIERAAAHCAHVFTTVSEITAYE--AEHLLKRK 248 (590)
T ss_pred c----ccccccccccCCcccch-----hhhhcchhhhhhcccchHHHHHHHHHHhhCCEEEECChHHHHH--HHHHhCCC
Confidence 9 44455531110 00000 0000100 001222222 112221111111000 01223343
Q ss_pred EEEEEeecccChHHHHHhhCCc----chHHH-----HHHHHHHhc-cCCcEEEEe-ccCccc-ccCHHHHHHHHHHHHHh
Q 044635 300 VSIKILPVGIHMGQLQSVLSLP----GTEAK-----VSELIKQFH-DQGKVMLLG-VDDMDI-FKGISLKLLAMEQLLIQ 367 (831)
Q Consensus 300 ~~i~v~P~GId~~~~~~~~~~~----~~~~~-----~~~lr~~~~-~~~~~iil~-VdRld~-~KGi~~~l~A~~~lL~~ 367 (831)
..+ |+|+|||++.|....... ...++ ...++.+|+ ..+++++++ +||+++ .||++.+|+|+.++-..
T Consensus 249 pd~-ViPNGid~~~f~~~~e~~~~~~~~k~ki~~f~~~~~~~~~~~~~d~tli~f~~GR~e~~nKGiDvlIeAl~rLn~~ 327 (590)
T cd03793 249 PDV-VLPNGLNVKKFSALHEFQNLHAQSKEKINEFVRGHFYGHYDFDLDKTLYFFTAGRYEFSNKGADMFLEALARLNYL 327 (590)
T ss_pred CCE-EeCCCcchhhcccchhhhhhhHHhhhhhhHHHHHHHhhhcCCCCCCeEEEEEeeccccccCCHHHHHHHHHHHHHH
Confidence 333 899999999986432110 01111 223456665 457888888 899999 99999999999998542
Q ss_pred CCC-CCCcEEEEEEecCCCCCc---------hhHHHHHHHHHHHHHHHhcc---------C-------------------
Q 044635 368 HPE-WQGKVVLVQIANPARGRG---------KDVKEVQAETYSTVERINQT---------F------------------- 409 (831)
Q Consensus 368 ~P~-~~~~vvLvqig~p~r~~~---------~~~~~l~~~i~~lv~~IN~~---------~------------------- 409 (831)
-.. -.++.|+..+..|+...+ .-..++++.+.++..+|..+ .
T Consensus 328 l~~~~~~~tVvafii~p~~~~~~~~~~l~g~~~~~~l~~~~~~i~~~i~~~~~~~~l~~~~~~~~~~~~~~~~~~~kr~~ 407 (590)
T cd03793 328 LKVEGSDTTVVAFFIMPAKTNNFNVESLKGQAVRKQLRDTVNSVKEKIGKRLFEAALKGKLPDLEELLDKEDKVMLKRRI 407 (590)
T ss_pred HHhcCCCCeEEEEEEecCccCCcCHHhhcchHHHHHHHHHHHHHHHHhhhhhhhHhhccCCCChhhhcchhhHHHHHHHH
Confidence 111 112233333444554331 22345666666666666555 1
Q ss_pred ----------------------------------C-CCCCccEEEecCCCC------HHHHHHHHHHcCEeEECCCccCC
Q 044635 410 ----------------------------------G-KPGYDPVVLIDEPLK------FYERIAYYVVAECCLVTAVRDGS 448 (831)
Q Consensus 410 ----------------------------------g-~~~~~pv~~~~~~v~------~~el~aly~~ADv~vvtS~~eGm 448 (831)
. ..+-..|+|....++ ..+...+|+.||++|+||.+|||
T Consensus 408 ~~~~~~~~~p~~tH~~~~~~~D~il~~~r~~~l~N~~~drVkvif~P~~L~~~~~~~g~~y~E~~~g~dl~v~PS~yE~f 487 (590)
T cd03793 408 FALQRHSLPPVVTHNMVDDANDPILNHIRRIQLFNSPEDRVKVVFHPEFLSSTNPLLGLDYEEFVRGCHLGVFPSYYEPW 487 (590)
T ss_pred HhhccCCCCCeeeecCCcCccCHHHHHHHHhcCcCCCCCeEEEEEcccccCCCCCcCCcchHHHhhhceEEEeccccCCC
Confidence 0 012223555443332 33588899999999999999998
Q ss_pred CC---CCCC-CceEEEecccccc----cccC----CCceeC-------CCCHHHHHHHHHHHhcCCHHHHHHHHHHHhhh
Q 044635 449 EP---SSPK-KSMLVVSEFIGCS----PSLS----GAIRVN-------PWNIDAVSDAMDSALEMADQEKQLRHEKHYRY 509 (831)
Q Consensus 449 a~---~~~~-~g~lVlSe~~G~~----~~l~----~allVn-------P~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~ 509 (831)
+. ++.. +.|+|.|..+|.. +.+. .|+.|. |.+++++|++|.+.++++..++........+.
T Consensus 488 G~~~lEAma~G~PvI~t~~~gf~~~v~E~v~~~~~~gi~V~~r~~~~~~e~v~~La~~m~~~~~~~~r~~~~~r~~~~r~ 567 (590)
T cd03793 488 GYTPAECTVMGIPSITTNLSGFGCFMEEHIEDPESYGIYIVDRRFKSPDESVQQLTQYMYEFCQLSRRQRIIQRNRTERL 567 (590)
T ss_pred CcHHHHHHHcCCCEEEccCcchhhhhHHHhccCCCceEEEecCCccchHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHH
Confidence 21 2222 4588888887773 3332 478887 56678999999998876544333322233355
Q ss_pred hccCCHHHHHHHHHHHHH
Q 044635 510 VSTHDVGYWARSFLQDLE 527 (831)
Q Consensus 510 v~~~~~~~W~~~~l~~l~ 527 (831)
....++.+-+..+++.-.
T Consensus 568 s~~f~W~~~~~~Y~~A~~ 585 (590)
T cd03793 568 SDLLDWRNLGRYYRKARQ 585 (590)
T ss_pred HHhCCHHHHHHHHHHHHH
Confidence 556666666665555433
No 87
>TIGR02918 accessory Sec system glycosylation protein GtfA. Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus. Members are associated with glycosylation of serine-rich glycoproteins exported by the accessory Sec system.
Probab=99.67 E-value=1.5e-14 Score=167.76 Aligned_cols=266 Identities=13% Similarity=0.088 Sum_probs=167.1
Q ss_pred CCCEEEEeCccccchHHHHHhhcCCCeEEEEEeccCCChH-Hhhc-C---CChHHHHHHHhcCCeEeecCHHhHHHHHHH
Q 044635 201 EDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSE-IYKT-L---PIREEILRALLNSDLIGFHTFDYARHFLSC 275 (831)
Q Consensus 201 ~~d~vwvhDyhL~llp~~lr~~~~~~~i~~flH~PfP~~e-~f~~-l---p~r~eil~~ll~~dligf~t~~~~~~Fl~~ 275 (831)
+.|++.++--. ...+.++ +..+.+|+..++|.-.=+.. .-.. . +.-+..++.+-.+|.|...|....+.....
T Consensus 211 ~~di~i~dr~~-~~~~~~~-~~~~~~~~v~~lH~~h~~~~~~~~~~~~~~~~y~~~~~~~~~~D~iI~~S~~~~~~l~~~ 288 (500)
T TIGR02918 211 KKDIIILDRST-GIGQAVL-ENKGPAKLGVVVHAEHFSESATNETYILWNNYYEYQFSNADYIDFFITATDIQNQILKNQ 288 (500)
T ss_pred CCCEEEEcCCc-ccchHHH-hcCCCceEEEEEChhhhcCccCcchhHHHHHHHHHHHhchhhCCEEEECCHHHHHHHHHH
Confidence 45887775434 3444444 56678999999995331110 0000 0 111222344445688777776544433321
Q ss_pred HHHHhCCeecccCceeeEEEcCEEEEEEEeecccChHHHHHhhCCcchHHHHHHHHHHhccCCcEEEEeccCcccccCHH
Q 044635 276 CSRMLGLTYESKRGYIGLEYYGRTVSIKILPVGIHMGQLQSVLSLPGTEAKVSELIKQFHDQGKVMLLGVDDMDIFKGIS 355 (831)
Q Consensus 276 ~~r~l~~~~~~~~~~~~~~~~gr~~~i~v~P~GId~~~~~~~~~~~~~~~~~~~lr~~~~~~~~~iil~VdRld~~KGi~ 355 (831)
.. .+.+...+|.++|+|++...+. +. .. ..+..|++|||+.+.||+.
T Consensus 289 ~~----------------~~~~~~~ki~viP~g~~~~~~~-----~~----------~~--r~~~~il~vGrl~~~Kg~~ 335 (500)
T TIGR02918 289 FK----------------KYYNIEPRIYTIPVGSLDELQY-----PE----------QE--RKPFSIITASRLAKEKHID 335 (500)
T ss_pred hh----------------hhcCCCCcEEEEcCCCcccccC-----cc----------cc--cCCeEEEEEeccccccCHH
Confidence 11 1122234677899998654321 10 01 3456899999999999999
Q ss_pred HHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhccCCCCCCccEEEecCCCCHHHHHHHHHH
Q 044635 356 LKLLAMEQLLIQHPEWQGKVVLVQIANPARGRGKDVKEVQAETYSTVERINQTFGKPGYDPVVLIDEPLKFYERIAYYVV 435 (831)
Q Consensus 356 ~~l~A~~~lL~~~P~~~~~vvLvqig~p~r~~~~~~~~l~~~i~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ 435 (831)
.+|+|+.++.+++|+++ |+++| +|+.. +++++++.+.+ ....+.+.|+. ++..+|+.
T Consensus 336 ~li~A~~~l~~~~p~~~----l~i~G-----~G~~~----~~l~~~i~~~~-------l~~~V~f~G~~---~~~~~~~~ 392 (500)
T TIGR02918 336 WLVKAVVKAKKSVPELT----FDIYG-----EGGEK----QKLQKIINENQ-------AQDYIHLKGHR---NLSEVYKD 392 (500)
T ss_pred HHHHHHHHHHhhCCCeE----EEEEE-----CchhH----HHHHHHHHHcC-------CCCeEEEcCCC---CHHHHHHh
Confidence 99999999999999876 88888 34443 34555554432 12334455654 57889999
Q ss_pred cCEeEECCCccCCCC---CCCCCc-eEEEeccc-cccccc---CCCceeCC----CC----HHHHHHHHHHHhcCCHHHH
Q 044635 436 AECCLVTAVRDGSEP---SSPKKS-MLVVSEFI-GCSPSL---SGAIRVNP----WN----IDAVSDAMDSALEMADQEK 499 (831)
Q Consensus 436 ADv~vvtS~~eGma~---~~~~~g-~lVlSe~~-G~~~~l---~~allVnP----~d----~~~~A~ai~~aL~m~~~er 499 (831)
||++|+||.+|||+. +++.+| |+|+|... |..+.+ .+|++|+| .| ++++|++|.++|+ ++++
T Consensus 393 adv~v~pS~~Egfgl~~lEAma~G~PVI~~dv~~G~~eiI~~g~nG~lv~~~~~~~d~~~~~~~la~~I~~ll~--~~~~ 470 (500)
T TIGR02918 393 YELYLSASTSEGFGLTLMEAVGSGLGMIGFDVNYGNPTFIEDNKNGYLIPIDEEEDDEDQIITALAEKIVEYFN--SNDI 470 (500)
T ss_pred CCEEEEcCccccccHHHHHHHHhCCCEEEecCCCCCHHHccCCCCEEEEeCCccccchhHHHHHHHHHHHHHhC--hHHH
Confidence 999999999999832 333445 66666665 555555 36899973 34 8899999999994 3455
Q ss_pred HHHHHHHhhhhccCCHHHHHHHHHHHH
Q 044635 500 QLRHEKHYRYVSTHDVGYWARSFLQDL 526 (831)
Q Consensus 500 ~~r~~~~~~~v~~~~~~~W~~~~l~~l 526 (831)
....+..++...+++...-++++.+-+
T Consensus 471 ~~~~~~a~~~a~~fs~~~v~~~w~~ll 497 (500)
T TIGR02918 471 DAFHEYSYQIAEGFLTANIIEKWKKLV 497 (500)
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHH
Confidence 555667777788888776666655443
No 88
>cd03814 GT1_like_2 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=99.66 E-value=1.5e-14 Score=159.60 Aligned_cols=272 Identities=15% Similarity=0.108 Sum_probs=179.8
Q ss_pred HHcCCCCCEEEEeCccccchHHHHHhhcCCCeEEEEEeccCCChHHhhcCCCh----HHHH-HHHhcCCeEeecCHHhHH
Q 044635 196 EVINPEDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYKTLPIR----EEIL-RALLNSDLIGFHTFDYAR 270 (831)
Q Consensus 196 ~~~~~~~d~vwvhDyhL~llp~~lr~~~~~~~i~~flH~PfP~~e~f~~lp~r----~eil-~~ll~~dligf~t~~~~~ 270 (831)
+..+| |+|++|...........-.+..++++.+++|..||..-........ ..+. ...-.+|.+-+.+.....
T Consensus 80 ~~~~p--dii~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~i~~~s~~~~~ 157 (364)
T cd03814 80 DAFAP--DVVHIATPGPLGLAALRAARRLGIPVVTSYHTDFPEYLRYYGLGPLSWLAWAYLRWFHNRADRVLVPSPSLAD 157 (364)
T ss_pred HhcCC--CEEEEeccchhhHHHHHHHHHcCCCEEEEEecChHHHhhhcccchHhHhhHHHHHHHHHhCCEEEeCCHHHHH
Confidence 44565 8999996544333333333345788999999888733221111111 1122 223357888887776655
Q ss_pred HHHHHHHHHhCCeecccCceeeEEEcCEEEEEEEeecccChHHHHHhhCCcchHHHHHHHHHHhccCCcEEEEeccCccc
Q 044635 271 HFLSCCSRMLGLTYESKRGYIGLEYYGRTVSIKILPVGIHMGQLQSVLSLPGTEAKVSELIKQFHDQGKVMLLGVDDMDI 350 (831)
Q Consensus 271 ~Fl~~~~r~l~~~~~~~~~~~~~~~~gr~~~i~v~P~GId~~~~~~~~~~~~~~~~~~~lr~~~~~~~~~iil~VdRld~ 350 (831)
.+.. .+ ..++.++|+|+|...|.+.... ...+++++..++++++++||+.+
T Consensus 158 ~~~~--------------------~~--~~~~~~~~~g~~~~~~~~~~~~-------~~~~~~~~~~~~~~i~~~G~~~~ 208 (364)
T cd03814 158 ELRA--------------------RG--FRRVRLWPRGVDTELFHPRRRD-------EALRARLGPPDRPVLLYVGRLAP 208 (364)
T ss_pred HHhc--------------------cC--CCceeecCCCccccccCccccc-------HHHHHHhCCCCCeEEEEEecccc
Confidence 2221 00 1246788999998877532111 12233333356789999999999
Q ss_pred ccCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhccCCCCCCccEEEecCCCCHHHHH
Q 044635 351 FKGISLKLLAMEQLLIQHPEWQGKVVLVQIANPARGRGKDVKEVQAETYSTVERINQTFGKPGYDPVVLIDEPLKFYERI 430 (831)
Q Consensus 351 ~KGi~~~l~A~~~lL~~~P~~~~~vvLvqig~p~r~~~~~~~~l~~~i~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~ 430 (831)
.||+..+++|+.++.++ |+++ |+++|. +++...++ . ....|. +.+.++.+++.
T Consensus 209 ~k~~~~~i~~~~~l~~~-~~~~----l~i~G~-----~~~~~~~~--------~--------~~~~v~-~~g~~~~~~~~ 261 (364)
T cd03814 209 EKNLEALLDADLPLRRR-PPVR----LVIVGD-----GPARARLE--------A--------RYPNVH-FLGFLDGEELA 261 (364)
T ss_pred ccCHHHHHHHHHHhhhc-CCce----EEEEeC-----CchHHHHh--------c--------cCCcEE-EEeccCHHHHH
Confidence 99999999999999877 7665 888883 23222222 0 011344 45678999999
Q ss_pred HHHHHcCEeEECCCccCCCC---CCCC-CceEEEeccccccccc---CCCceeCCCCHHHHHHHHHHHhcCCHHHHHHHH
Q 044635 431 AYYVVAECCLVTAVRDGSEP---SSPK-KSMLVVSEFIGCSPSL---SGAIRVNPWNIDAVSDAMDSALEMADQEKQLRH 503 (831)
Q Consensus 431 aly~~ADv~vvtS~~eGma~---~~~~-~g~lVlSe~~G~~~~l---~~allVnP~d~~~~A~ai~~aL~m~~~er~~r~ 503 (831)
.+|+.||++++||..||++. ++.. +.|+|++...|..+.+ ..|++++|.|.++++++|.++++.+ +++....
T Consensus 262 ~~~~~~d~~l~~s~~e~~~~~~lEa~a~g~PvI~~~~~~~~~~i~~~~~g~~~~~~~~~~l~~~i~~l~~~~-~~~~~~~ 340 (364)
T cd03814 262 AAYASADVFVFPSRTETFGLVVLEAMASGLPVVAPDAGGPADIVTDGENGLLVEPGDAEAFAAALAALLADP-ELRRRMA 340 (364)
T ss_pred HHHHhCCEEEECcccccCCcHHHHHHHcCCCEEEcCCCCchhhhcCCcceEEcCCCCHHHHHHHHHHHHcCH-HHHHHHH
Confidence 99999999999999998721 2222 4577777777777666 3689999999999999999999754 4555556
Q ss_pred HHHhhhhccCCHHHHHHHHHHHH
Q 044635 504 EKHYRYVSTHDVGYWARSFLQDL 526 (831)
Q Consensus 504 ~~~~~~v~~~~~~~W~~~~l~~l 526 (831)
+..++.+.++++..+++++++-+
T Consensus 341 ~~~~~~~~~~~~~~~~~~~~~~~ 363 (364)
T cd03814 341 ARARAEAERRSWEAFLDNLLEAY 363 (364)
T ss_pred HHHHHHHhhcCHHHHHHHHHHhh
Confidence 66777778889888888777543
No 89
>cd04946 GT1_AmsK_like This family is most closely related to the GT1 family of glycosyltransferases. AmsK is involved in the biosynthesis of amylovoran, which functions as a virulence factor. It functions as a glycosyl transferase which transfers galactose from UDP-galactose to a lipid-linked amylovoran-subunit precursor. The members of this family are found mainly in bacteria and Archaea.
Probab=99.66 E-value=2.4e-14 Score=162.98 Aligned_cols=268 Identities=12% Similarity=0.099 Sum_probs=177.2
Q ss_pred CCCCCEEEEeCccccchH-HHHHhhcCCCeEEEEEecc--CCChHHhhcCCChHHHHHHHhcCCeEeecCHHhHHHHHHH
Q 044635 199 NPEDDFVWVHDYHLMVLP-TFLRKRFNRVKLGFFLHSP--FPSSEIYKTLPIREEILRALLNSDLIGFHTFDYARHFLSC 275 (831)
Q Consensus 199 ~~~~d~vwvhDyhL~llp-~~lr~~~~~~~i~~flH~P--fP~~e~f~~lp~r~eil~~ll~~dligf~t~~~~~~Fl~~ 275 (831)
+++.|+++.|-++..... .+++++....++....|-. ++.......++.++.+ +-.+|.|.+.+....+.+...
T Consensus 125 ~~~~~v~~sy~~~~~~~~~~~l~~~~~~~~~i~~~Hg~d~~~~~~~~~~~~~~~~~---~~~~d~ii~~S~~~~~~l~~~ 201 (407)
T cd04946 125 DGQGTVFYSYWLHETAYALALLKKEYLRKRVISRAHGYDLYEDRYPSGYIPLRRYL---LSSLDAVFPCSEQGRNYLQKR 201 (407)
T ss_pred ccCceEEEEecCchHHHHHHHHHHhcCCceEEEEeccchhhhhhccccchHHHHHH---HhcCCEEEECCHHHHHHHHHH
Confidence 344577777655544433 3566666656688888832 1111111112222222 346899998887666544321
Q ss_pred HHHHhCCeecccCceeeEEEcCEEEEEEEeecccChHHHHHhhCCcchHHHHHHHHHHhccCCcEEEEeccCcccccCHH
Q 044635 276 CSRMLGLTYESKRGYIGLEYYGRTVSIKILPVGIHMGQLQSVLSLPGTEAKVSELIKQFHDQGKVMLLGVDDMDIFKGIS 355 (831)
Q Consensus 276 ~~r~l~~~~~~~~~~~~~~~~gr~~~i~v~P~GId~~~~~~~~~~~~~~~~~~~lr~~~~~~~~~iil~VdRld~~KGi~ 355 (831)
++ ....++.++|+|++...+... .. ..++..|+++||+.+.||++
T Consensus 202 ----~~---------------~~~~ki~vi~~gv~~~~~~~~--------------~~--~~~~~~il~~Grl~~~Kg~~ 246 (407)
T cd04946 202 ----YP---------------AYKEKIKVSYLGVSDPGIISK--------------PS--KDDTLRIVSCSYLVPVKRVD 246 (407)
T ss_pred ----CC---------------CccccEEEEECCcccccccCC--------------CC--CCCCEEEEEeeccccccCHH
Confidence 11 123466788999997655311 01 15678899999999999999
Q ss_pred HHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhccCCCCCCccEEEecCCCCHHHHHHHHHH
Q 044635 356 LKLLAMEQLLIQHPEWQGKVVLVQIANPARGRGKDVKEVQAETYSTVERINQTFGKPGYDPVVLIDEPLKFYERIAYYVV 435 (831)
Q Consensus 356 ~~l~A~~~lL~~~P~~~~~vvLvqig~p~r~~~~~~~~l~~~i~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ 435 (831)
.+++|+.++.+++|+.. +.++.+| +|+..+++ ++++.+. + ..+.+.+.|.++.+|+.++|+.
T Consensus 247 ~li~a~~~l~~~~p~~~--l~~~iiG-----~g~~~~~l----~~~~~~~----~---~~~~V~f~G~v~~~e~~~~~~~ 308 (407)
T cd04946 247 LIIKALAALAKARPSIK--IKWTHIG-----GGPLEDTL----KELAESK----P---ENISVNFTGELSNSEVYKLYKE 308 (407)
T ss_pred HHHHHHHHHHHhCCCce--EEEEEEe-----CchHHHHH----HHHHHhc----C---CCceEEEecCCChHHHHHHHhh
Confidence 99999999999988764 6677777 34443333 3443321 1 1134556789999999999986
Q ss_pred --cCEeEECCCccCCCC---CCCC-CceEEEecccccccccC---CCceeCC-CCHHHHHHHHHHHhcCCHHHHHHHHHH
Q 044635 436 --AECCLVTAVRDGSEP---SSPK-KSMLVVSEFIGCSPSLS---GAIRVNP-WNIDAVSDAMDSALEMADQEKQLRHEK 505 (831)
Q Consensus 436 --ADv~vvtS~~eGma~---~~~~-~g~lVlSe~~G~~~~l~---~allVnP-~d~~~~A~ai~~aL~m~~~er~~r~~~ 505 (831)
||+++.||..||+.. +++. +.|+|+|..+|..+.+. +|++++| .|++++|++|.++++ +++++....++
T Consensus 309 ~~~~v~v~~S~~Eg~p~~llEAma~G~PVIas~vgg~~e~i~~~~~G~l~~~~~~~~~la~~I~~ll~-~~~~~~~m~~~ 387 (407)
T cd04946 309 NPVDVFVNLSESEGLPVSIMEAMSFGIPVIATNVGGTPEIVDNGGNGLLLSKDPTPNELVSSLSKFID-NEEEYQTMREK 387 (407)
T ss_pred cCCCEEEeCCccccccHHHHHHHHcCCCEEeCCCCCcHHHhcCCCcEEEeCCCCCHHHHHHHHHHHHh-CHHHHHHHHHH
Confidence 788999999999921 2222 45777888777777663 4688876 489999999999998 44556555666
Q ss_pred Hhhhh-ccCCHHHHHHHHH
Q 044635 506 HYRYV-STHDVGYWARSFL 523 (831)
Q Consensus 506 ~~~~v-~~~~~~~W~~~~l 523 (831)
.++++ .++++..+.++|+
T Consensus 388 ar~~~~~~f~~~~~~~~~~ 406 (407)
T cd04946 388 AREKWEENFNASKNYREFA 406 (407)
T ss_pred HHHHHHHHcCHHHhHHHhc
Confidence 77776 5678887777764
No 90
>cd03823 GT1_ExpE7_like This family is most closely related to the GT1 family of glycosyltransferases. ExpE7 in Sinorhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucans (exopolysaccharide II).
Probab=99.65 E-value=7.5e-14 Score=153.51 Aligned_cols=257 Identities=16% Similarity=0.166 Sum_probs=165.6
Q ss_pred HHHHHcCCCCCEEEEeCccccchHHHHHhhcCCCeEEEEEeccCCChHHhhcCCChHHHHHHHhcCCeEeecCHHhHHHH
Q 044635 193 RIMEVINPEDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYKTLPIREEILRALLNSDLIGFHTFDYARHF 272 (831)
Q Consensus 193 ~i~~~~~~~~d~vwvhDyhL~llp~~lr~~~~~~~i~~flH~PfP~~e~f~~lp~r~eil~~ll~~dligf~t~~~~~~F 272 (831)
++++..++ |+|++|.+..+.++.....+...+|+.+.+|-.++.. |....+.. ..|.+-..+....+.|
T Consensus 90 ~~~~~~~~--dii~~~~~~~~~~~~~~~~~~~~~~~i~~~hd~~~~~------~~~~~~~~---~~d~ii~~s~~~~~~~ 158 (359)
T cd03823 90 RLLEDFRP--DVVHFHHLQGLGVSILRAARDRGIPIVLTLHDYWLIC------PRQGLFKK---GGDAVIAPSRFLLDRY 158 (359)
T ss_pred HHHHHcCC--CEEEECCccchHHHHHHHHHhcCCCEEEEEeeeeeec------chhhhhcc---CCCEEEEeCHHHHHHH
Confidence 33444455 8999998755544443333344689999999655322 21111111 1288877776555555
Q ss_pred HHHHHHHhCCeecccCceeeEEEcCEEEEEEEeecccChHHHHHhhCCcchHHHHHHHHHHhccCCcEEEEeccCccccc
Q 044635 273 LSCCSRMLGLTYESKRGYIGLEYYGRTVSIKILPVGIHMGQLQSVLSLPGTEAKVSELIKQFHDQGKVMLLGVDDMDIFK 352 (831)
Q Consensus 273 l~~~~r~l~~~~~~~~~~~~~~~~gr~~~i~v~P~GId~~~~~~~~~~~~~~~~~~~lr~~~~~~~~~iil~VdRld~~K 352 (831)
... + ....++.++|+|+|...+..... .. ..++.+++++||+.+.|
T Consensus 159 ~~~-----~---------------~~~~~~~vi~n~~~~~~~~~~~~-------------~~-~~~~~~i~~~G~~~~~k 204 (359)
T cd03823 159 VAN-----G---------------LFAEKISVIRNGIDLDRAKRPRR-------------AP-PGGRLRFGFIGQLTPHK 204 (359)
T ss_pred HHc-----C---------------CCccceEEecCCcChhhcccccc-------------CC-CCCceEEEEEecCcccc
Confidence 420 0 11347788999999987642110 11 25678899999999999
Q ss_pred CHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhccCCCCCCccEEEecCCCCHHHHHHH
Q 044635 353 GISLKLLAMEQLLIQHPEWQGKVVLVQIANPARGRGKDVKEVQAETYSTVERINQTFGKPGYDPVVLIDEPLKFYERIAY 432 (831)
Q Consensus 353 Gi~~~l~A~~~lL~~~P~~~~~vvLvqig~p~r~~~~~~~~l~~~i~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~al 432 (831)
|+..+++|+..+.+ ++++ |+++|... .....+... + ..+.+.+.+.++.+++..+
T Consensus 205 ~~~~li~~~~~l~~--~~~~----l~i~G~~~-----~~~~~~~~~-----------~---~~~~v~~~g~~~~~~~~~~ 259 (359)
T cd03823 205 GVDLLLEAFKRLPR--GDIE----LVIVGNGL-----ELEEESYEL-----------E---GDPRVEFLGAYPQEEIDDF 259 (359)
T ss_pred CHHHHHHHHHHHHh--cCcE----EEEEcCch-----hhhHHHHhh-----------c---CCCeEEEeCCCCHHHHHHH
Confidence 99999999998866 5544 88888432 211111111 1 1134456778999999999
Q ss_pred HHHcCEeEECCC-ccCCCC---CCCC-CceEEEecccccccccC---CCceeCCCCHHHHHHHHHHHhcCCHHHHHHHHH
Q 044635 433 YVVAECCLVTAV-RDGSEP---SSPK-KSMLVVSEFIGCSPSLS---GAIRVNPWNIDAVSDAMDSALEMADQEKQLRHE 504 (831)
Q Consensus 433 y~~ADv~vvtS~-~eGma~---~~~~-~g~lVlSe~~G~~~~l~---~allVnP~d~~~~A~ai~~aL~m~~~er~~r~~ 504 (831)
|+.||++++||. .||+.. ++.. +.|+|+|...|..+.+. +|++++|.|+++++++|.++++.+ +.++...+
T Consensus 260 ~~~ad~~i~ps~~~e~~~~~~~Ea~a~G~Pvi~~~~~~~~e~i~~~~~g~~~~~~d~~~l~~~i~~l~~~~-~~~~~~~~ 338 (359)
T cd03823 260 YAEIDVLVVPSIWPENFPLVIREALAAGVPVIASDIGGMAELVRDGVNGLLFPPGDAEDLAAALERLIDDP-DLLERLRA 338 (359)
T ss_pred HHhCCEEEEcCcccCCCChHHHHHHHCCCCEEECCCCCHHHHhcCCCcEEEECCCCHHHHHHHHHHHHhCh-HHHHHHHH
Confidence 999999999997 688821 2222 45788888777776663 589999999999999999999844 44444444
Q ss_pred HHhhhhccCCHHHHHHHHH
Q 044635 505 KHYRYVSTHDVGYWARSFL 523 (831)
Q Consensus 505 ~~~~~v~~~~~~~W~~~~l 523 (831)
..++.+.. ..++++++
T Consensus 339 ~~~~~~~~---~~~~~~~~ 354 (359)
T cd03823 339 GIEPPRSI---EDQAEEYL 354 (359)
T ss_pred hHHHhhhH---HHHHHHHH
Confidence 45554433 44444443
No 91
>cd04949 GT1_gtfA_like This family is most closely related to the GT1 family of glycosyltransferases and is named after gtfA in Streptococcus gordonii, where it plays a role in the O-linked glycosylation of GspB, a cell surface glycoprotein involved in platelet binding. In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltra
Probab=99.65 E-value=8e-15 Score=164.32 Aligned_cols=277 Identities=16% Similarity=0.081 Sum_probs=177.6
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCEEEEeCccccchHHHHHhhcCCCeEEEEEeccCCCh-HHhhcCCC---hHHHHHHHhc
Q 044635 182 AYVSVNKIFADRIMEVINPEDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSS-EIYKTLPI---REEILRALLN 257 (831)
Q Consensus 182 ~Y~~vN~~fa~~i~~~~~~~~d~vwvhDyhL~llp~~lr~~~~~~~i~~flH~PfP~~-e~f~~lp~---r~eil~~ll~ 257 (831)
...+.-+.|-+++.. .. ..|+|.+|-.+.... .+.......+...++|...-.. ..-...++ .+.++..+-.
T Consensus 82 ~~~~l~~~~l~~l~~-~~-~~diii~~~~~~~~~--~~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (372)
T cd04949 82 NEEELFAFFLDELNK-DT-KPDVFILDRPTLDGQ--ALLNMKKAAKVVVVLHSNHVSDNNDPVHSLINNFYEYVFENLDK 157 (372)
T ss_pred CHHHHHHHHHHHHhc-CC-CCCEEEECCccccch--hHHhccCCceEEEEEChHHhCCcccccccccchhhHHHHhChhh
Confidence 344444455555543 22 348888887776654 2333444566778888532111 00001122 2455555667
Q ss_pred CCeEeecCHHhHHHHHHHHHHHhCCeecccCceeeEEEcCEEEEEEEeecccChHHHHHhhCCcchHHHHHHHHHHhccC
Q 044635 258 SDLIGFHTFDYARHFLSCCSRMLGLTYESKRGYIGLEYYGRTVSIKILPVGIHMGQLQSVLSLPGTEAKVSELIKQFHDQ 337 (831)
Q Consensus 258 ~dligf~t~~~~~~Fl~~~~r~l~~~~~~~~~~~~~~~~gr~~~i~v~P~GId~~~~~~~~~~~~~~~~~~~lr~~~~~~ 337 (831)
+|.|.+.|..-.+.+.... + ...++.++|+|++...+.... ... .
T Consensus 158 ~d~ii~~s~~~~~~l~~~~----~----------------~~~~v~~ip~g~~~~~~~~~~-------------~~~--~ 202 (372)
T cd04949 158 VDGVIVATEQQKQDLQKQF----G----------------NYNPIYTIPVGSIDPLKLPAQ-------------FKQ--R 202 (372)
T ss_pred CCEEEEccHHHHHHHHHHh----C----------------CCCceEEEcccccChhhcccc-------------hhh--c
Confidence 8999988876666664321 1 111267899999987664210 011 4
Q ss_pred CcEEEEeccCcccccCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhccCCCCCCccE
Q 044635 338 GKVMLLGVDDMDIFKGISLKLLAMEQLLIQHPEWQGKVVLVQIANPARGRGKDVKEVQAETYSTVERINQTFGKPGYDPV 417 (831)
Q Consensus 338 ~~~iil~VdRld~~KGi~~~l~A~~~lL~~~P~~~~~vvLvqig~p~r~~~~~~~~l~~~i~~lv~~IN~~~g~~~~~pv 417 (831)
.+..++++||+.+.||+..+|+|+.++.+++|+++ |+++|.. +....++..+ .+. +....
T Consensus 203 ~~~~i~~vgrl~~~K~~~~li~a~~~l~~~~~~~~----l~i~G~g-----~~~~~~~~~~----~~~-------~~~~~ 262 (372)
T cd04949 203 KPHKIITVARLAPEKQLDQLIKAFAKVVKQVPDAT----LDIYGYG-----DEEEKLKELI----EEL-------GLEDY 262 (372)
T ss_pred CCCeEEEEEccCcccCHHHHHHHHHHHHHhCCCcE----EEEEEeC-----chHHHHHHHH----HHc-------CCcce
Confidence 56789999999999999999999999999999876 8888843 3323333332 222 22234
Q ss_pred EEecCCCCHHHHHHHHHHcCEeEECCCccCCCC---CCCCCc-eEEEeccc-cccccc---CCCceeCCCCHHHHHHHHH
Q 044635 418 VLIDEPLKFYERIAYYVVAECCLVTAVRDGSEP---SSPKKS-MLVVSEFI-GCSPSL---SGAIRVNPWNIDAVSDAMD 489 (831)
Q Consensus 418 ~~~~~~v~~~el~aly~~ADv~vvtS~~eGma~---~~~~~g-~lVlSe~~-G~~~~l---~~allVnP~d~~~~A~ai~ 489 (831)
+.+.|. .+++.++|+.||++|+||..||+.. ++...| |+|++... |..+.+ .+|++++|.|++++|++|.
T Consensus 263 v~~~g~--~~~~~~~~~~ad~~v~~S~~Eg~~~~~lEAma~G~PvI~~~~~~g~~~~v~~~~~G~lv~~~d~~~la~~i~ 340 (372)
T cd04949 263 VFLKGY--TRDLDEVYQKAQLSLLTSQSEGFGLSLMEALSHGLPVISYDVNYGPSEIIEDGENGYLVPKGDIEALAEAII 340 (372)
T ss_pred EEEcCC--CCCHHHHHhhhhEEEecccccccChHHHHHHhCCCCEEEecCCCCcHHHcccCCCceEeCCCcHHHHHHHHH
Confidence 455553 5689999999999999999998831 333344 66777665 555555 4689999999999999999
Q ss_pred HHhcCCHHHHHHHHHHHhhhhccCCHHHHHH
Q 044635 490 SALEMADQEKQLRHEKHYRYVSTHDVGYWAR 520 (831)
Q Consensus 490 ~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~ 520 (831)
.+|+.+ +.+....+..++...++++..+++
T Consensus 341 ~ll~~~-~~~~~~~~~a~~~~~~~s~~~~~~ 370 (372)
T cd04949 341 ELLNDP-KLLQKFSEAAYENAERYSEENVWE 370 (372)
T ss_pred HHHcCH-HHHHHHHHHHHHHHHHhhHHHHHh
Confidence 999865 444455555666666666655544
No 92
>cd03820 GT1_amsD_like This family is most closely related to the GT1 family of glycosyltransferases. AmSD in Erwinia amylovora has been shown to be involved in the biosynthesis of amylovoran, the acidic exopolysaccharide acting as a virulence factor. This enzyme may be responsible for the formation of galactose alpha-1,6 linkages in amylovoran.
Probab=99.62 E-value=3e-14 Score=155.11 Aligned_cols=255 Identities=13% Similarity=0.126 Sum_probs=167.3
Q ss_pred CEEEEeCccccchHHHHHhhcCCCeEEEEEeccCCChHHhhcCCChHHHHHHHhcCCeEeecCHHhHHHHHHHHHHHhCC
Q 044635 203 DFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYKTLPIREEILRALLNSDLIGFHTFDYARHFLSCCSRMLGL 282 (831)
Q Consensus 203 d~vwvhDyhL~llp~~lr~~~~~~~i~~flH~PfP~~e~f~~lp~r~eil~~ll~~dligf~t~~~~~~Fl~~~~r~l~~ 282 (831)
|+|++|+.+...+...+.... .++.+..|..++....... +.......+-.+|.+-+.+......+.
T Consensus 85 d~i~~~~~~~~~~~~~~~~~~--~~~i~~~~~~~~~~~~~~~--~~~~~~~~~~~~d~ii~~s~~~~~~~~--------- 151 (348)
T cd03820 85 DVVISFLTSLLTFLASLGLKI--VKLIVSEHNSPDAYKKRLR--RLLLRRLLYRRADAVVVLTEEDRALYY--------- 151 (348)
T ss_pred CEEEEcCchHHHHHHHHhhcc--ccEEEecCCCccchhhhhH--HHHHHHHHHhcCCEEEEeCHHHHHHhh---------
Confidence 899999888222222222211 4888888977654332211 111123344567888777765441110
Q ss_pred eecccCceeeEEEcCEEEEEEEeecccChHHHHHhhCCcchHHHHHHHHHHhccCCcEEEEeccCcccccCHHHHHHHHH
Q 044635 283 TYESKRGYIGLEYYGRTVSIKILPVGIHMGQLQSVLSLPGTEAKVSELIKQFHDQGKVMLLGVDDMDIFKGISLKLLAME 362 (831)
Q Consensus 283 ~~~~~~~~~~~~~~gr~~~i~v~P~GId~~~~~~~~~~~~~~~~~~~lr~~~~~~~~~iil~VdRld~~KGi~~~l~A~~ 362 (831)
.....++.++|+|++...+... . ..+++.++++||+.+.||++.+++|+.
T Consensus 152 -------------~~~~~~~~vi~~~~~~~~~~~~---------------~--~~~~~~i~~~g~~~~~K~~~~l~~~~~ 201 (348)
T cd03820 152 -------------KKFNKNVVVIPNPLPFPPEEPS---------------S--DLKSKRILAVGRLVPQKGFDLLIEAWA 201 (348)
T ss_pred -------------ccCCCCeEEecCCcChhhcccc---------------C--CCCCcEEEEEEeeccccCHHHHHHHHH
Confidence 1122367789999998765311 1 156789999999999999999999999
Q ss_pred HHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhccCCCCCCccEEEecCCCCHHHHHHHHHHcCEeEEC
Q 044635 363 QLLIQHPEWQGKVVLVQIANPARGRGKDVKEVQAETYSTVERINQTFGKPGYDPVVLIDEPLKFYERIAYYVVAECCLVT 442 (831)
Q Consensus 363 ~lL~~~P~~~~~vvLvqig~p~r~~~~~~~~l~~~i~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv~vvt 442 (831)
++.+.+|+++ |+++|. ++....++ +++.+. +..+.+.+.+. .+++..+|+.||++++|
T Consensus 202 ~l~~~~~~~~----l~i~G~-----~~~~~~~~----~~~~~~-------~~~~~v~~~g~--~~~~~~~~~~ad~~i~p 259 (348)
T cd03820 202 KIAKKHPDWK----LRIVGD-----GPEREALE----ALIKEL-------GLEDRVILLGF--TKNIEEYYAKASIFVLT 259 (348)
T ss_pred HHHhcCCCeE----EEEEeC-----CCCHHHHH----HHHHHc-------CCCCeEEEcCC--cchHHHHHHhCCEEEeC
Confidence 9988888765 888883 23333333 333332 22344555554 68999999999999999
Q ss_pred CCccCCCC---CCC-CCceEEEeccccccccc----CCCceeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHhhhhccCC
Q 044635 443 AVRDGSEP---SSP-KKSMLVVSEFIGCSPSL----SGAIRVNPWNIDAVSDAMDSALEMADQEKQLRHEKHYRYVSTHD 514 (831)
Q Consensus 443 S~~eGma~---~~~-~~g~lVlSe~~G~~~~l----~~allVnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~ 514 (831)
|..||+.. ++. .+.|+|+|...|..+++ ..|+++++.|+++++++|.++++.+ +.+....+..++.+.+++
T Consensus 260 s~~e~~~~~~~Ea~a~G~Pvi~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~ll~~~-~~~~~~~~~~~~~~~~~~ 338 (348)
T cd03820 260 SRFEGFPMVLLEAMAFGLPVISFDCPTGPSEIIEDGVNGLLVPNGDVEALAEALLRLMEDE-ELRKRMGANARESAERFS 338 (348)
T ss_pred ccccccCHHHHHHHHcCCCEEEecCCCchHhhhccCcceEEeCCCCHHHHHHHHHHHHcCH-HHHHHHHHHHHHHHHHhC
Confidence 99999821 222 24577777765555444 2689999999999999999999754 344444445577788888
Q ss_pred HHHHHHHHH
Q 044635 515 VGYWARSFL 523 (831)
Q Consensus 515 ~~~W~~~~l 523 (831)
+...++++.
T Consensus 339 ~~~~~~~~~ 347 (348)
T cd03820 339 IENIIKQWE 347 (348)
T ss_pred HHHHHHHhc
Confidence 888777664
No 93
>PRK09922 UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D-galactosyltransferase; Provisional
Probab=99.60 E-value=5.3e-14 Score=157.39 Aligned_cols=236 Identities=12% Similarity=0.097 Sum_probs=154.4
Q ss_pred HHHHHcCCCCCEEEEeCccccchHHHHHhhc-CCCeEEEEEeccCCChHHhhcCCChHHHHHHHhcCCeEeecCHHhHHH
Q 044635 193 RIMEVINPEDDFVWVHDYHLMVLPTFLRKRF-NRVKLGFFLHSPFPSSEIYKTLPIREEILRALLNSDLIGFHTFDYARH 271 (831)
Q Consensus 193 ~i~~~~~~~~d~vwvhDyhL~llp~~lr~~~-~~~~i~~flH~PfP~~e~f~~lp~r~eil~~ll~~dligf~t~~~~~~ 271 (831)
++.+..+| |+|++|+.....+..++++.. ...++..+.|..++....+. ...+-.+|.+-..+..-.+.
T Consensus 78 ~~l~~~~~--Dii~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~--------~~~~~~~d~~i~~S~~~~~~ 147 (359)
T PRK09922 78 KWLKETQP--DIVICIDVISCLYANKARKKSGKQFKIFSWPHFSLDHKKHAE--------CKKITCADYHLAISSGIKEQ 147 (359)
T ss_pred HHHHhcCC--CEEEEcCHHHHHHHHHHHHHhCCCCeEEEEecCcccccchhh--------hhhhhcCCEEEEcCHHHHHH
Confidence 34455555 899999987777666666543 33556666776554432221 11235688888777655444
Q ss_pred HHHHHHHHhCCeecccCceeeEEEcCEEEEEEEeecccChHHHHHhhCCcchHHHHHHHHHHhccCCcEEEEeccCcc--
Q 044635 272 FLSCCSRMLGLTYESKRGYIGLEYYGRTVSIKILPVGIHMGQLQSVLSLPGTEAKVSELIKQFHDQGKVMLLGVDDMD-- 349 (831)
Q Consensus 272 Fl~~~~r~l~~~~~~~~~~~~~~~~gr~~~i~v~P~GId~~~~~~~~~~~~~~~~~~~lr~~~~~~~~~iil~VdRld-- 349 (831)
+.. .+. ...++.++|+|||.+.+... .+ .. .++++++++||+.
T Consensus 148 ~~~-----~~~---------------~~~ki~vi~N~id~~~~~~~--~~-----------~~--~~~~~i~~~Grl~~~ 192 (359)
T PRK09922 148 MMA-----RGI---------------SAQRISVIYNPVEIKTIIIP--PP-----------ER--DKPAVFLYVGRLKFE 192 (359)
T ss_pred HHH-----cCC---------------CHHHEEEEcCCCCHHHccCC--Cc-----------cc--CCCcEEEEEEEEecc
Confidence 432 121 11246678999997654211 00 01 3467899999996
Q ss_pred cccCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhccCCCCCCccEEEecCCC--CHH
Q 044635 350 IFKGISLKLLAMEQLLIQHPEWQGKVVLVQIANPARGRGKDVKEVQAETYSTVERINQTFGKPGYDPVVLIDEPL--KFY 427 (831)
Q Consensus 350 ~~KGi~~~l~A~~~lL~~~P~~~~~vvLvqig~p~r~~~~~~~~l~~~i~~lv~~IN~~~g~~~~~pv~~~~~~v--~~~ 427 (831)
..||+..+++|+.++ .+ ++.|+++| +|++.+++ ++++++.| ...-+.+.|.+ +.+
T Consensus 193 ~~k~~~~l~~a~~~~---~~----~~~l~ivG-----~g~~~~~l----~~~~~~~~-------l~~~v~f~G~~~~~~~ 249 (359)
T PRK09922 193 GQKNVKELFDGLSQT---TG----EWQLHIIG-----DGSDFEKC----KAYSRELG-------IEQRIIWHGWQSQPWE 249 (359)
T ss_pred cCcCHHHHHHHHHhh---CC----CeEEEEEe-----CCccHHHH----HHHHHHcC-------CCCeEEEecccCCcHH
Confidence 459999999999876 22 35699888 34443344 44444432 22234455554 458
Q ss_pred HHHHHHHHcCEeEECCCccCCC---CCCCC-CceEEEec-ccccccccC---CCceeCCCCHHHHHHHHHHHhcCCH
Q 044635 428 ERIAYYVVAECCLVTAVRDGSE---PSSPK-KSMLVVSE-FIGCSPSLS---GAIRVNPWNIDAVSDAMDSALEMAD 496 (831)
Q Consensus 428 el~aly~~ADv~vvtS~~eGma---~~~~~-~g~lVlSe-~~G~~~~l~---~allVnP~d~~~~A~ai~~aL~m~~ 496 (831)
++..+|+.||++|+||..|||. .+++. +.|+|+|. ..|+.+.+. +|++|+|.|++++|++|.+.++.++
T Consensus 250 ~~~~~~~~~d~~v~~s~~Egf~~~~lEAma~G~Pvv~s~~~~g~~eiv~~~~~G~lv~~~d~~~la~~i~~l~~~~~ 326 (359)
T PRK09922 250 VVQQKIKNVSALLLTSKFEGFPMTLLEAMSYGIPCISSDCMSGPRDIIKPGLNGELYTPGNIDEFVGKLNKVISGEV 326 (359)
T ss_pred HHHHHHhcCcEEEECCcccCcChHHHHHHHcCCCEEEeCCCCChHHHccCCCceEEECCCCHHHHHHHHHHHHhCcc
Confidence 9999999999999999999982 12222 45778887 677666663 5899999999999999999998764
No 94
>PHA01633 putative glycosyl transferase group 1
Probab=99.60 E-value=2e-14 Score=157.23 Aligned_cols=188 Identities=18% Similarity=0.197 Sum_probs=131.4
Q ss_pred eecccChHHHHHhhCCcchHHHHHHHHHHhc-c-CCcEEEEeccCcccccCHHHHHHHHHHHHHhCCCCCCcEEEEEEec
Q 044635 305 LPVGIHMGQLQSVLSLPGTEAKVSELIKQFH-D-QGKVMLLGVDDMDIFKGISLKLLAMEQLLIQHPEWQGKVVLVQIAN 382 (831)
Q Consensus 305 ~P~GId~~~~~~~~~~~~~~~~~~~lr~~~~-~-~~~~iil~VdRld~~KGi~~~l~A~~~lL~~~P~~~~~vvLvqig~ 382 (831)
+|.|||.+.|.+.. ....+++++++ . .+..++++|||+++.||+..+++|++++.+++|++..++.|+++|.
T Consensus 118 I~~GVD~~~f~p~~------~~~~~~r~~~~~~~~~~~~i~~vGRl~~~KG~~~LI~A~~~L~~~~p~~~~~i~l~ivG~ 191 (335)
T PHA01633 118 VFHGINFKIVENAE------KLVPQLKQKLDKDFPDTIKFGIVSGLTKRKNMDLMLQVFNELNTKYPDIAKKIHFFVISH 191 (335)
T ss_pred eeCCCChhhcCccc------hhhHHHHHHhCcCCCCCeEEEEEeCCccccCHHHHHHHHHHHHHhCCCccccEEEEEEcH
Confidence 56799999885321 11234555553 1 4678899999999999999999999999999999876777877761
Q ss_pred CCCCCchhHHHHHHHHHHHHHHHhccCCCCCCccEEEec--CCCCHHHHHHHHHHcCEeEECCCccCCC---CCCCC-Cc
Q 044635 383 PARGRGKDVKEVQAETYSTVERINQTFGKPGYDPVVLID--EPLKFYERIAYYVVAECCLVTAVRDGSE---PSSPK-KS 456 (831)
Q Consensus 383 p~r~~~~~~~~l~~~i~~lv~~IN~~~g~~~~~pv~~~~--~~v~~~el~aly~~ADv~vvtS~~eGma---~~~~~-~g 456 (831)
. ++.++ +..+ .|.+.. +.++.+++.++|+.||++|+||..|||. .+++. +.
T Consensus 192 ------~-------~~~~l--------~l~~--~V~f~g~~G~~~~~dl~~~y~~aDifV~PS~~EgfGlvlLEAMA~G~ 248 (335)
T PHA01633 192 ------K-------QFTQL--------EVPA--NVHFVAEFGHNSREYIFAFYGAMDFTIVPSGTEGFGMPVLESMAMGT 248 (335)
T ss_pred ------H-------HHHHc--------CCCC--cEEEEecCCCCCHHHHHHHHHhCCEEEECCccccCCHHHHHHHHcCC
Confidence 1 11111 1111 355553 6778999999999999999999999982 23333 34
Q ss_pred eEEEecccccccccC---------------------CCceeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHhhhhccCCH
Q 044635 457 MLVVSEFIGCSPSLS---------------------GAIRVNPWNIDAVSDAMDSALEMADQEKQLRHEKHYRYVSTHDV 515 (831)
Q Consensus 457 ~lVlSe~~G~~~~l~---------------------~allVnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~ 515 (831)
|+|+|...|..+..+ .|+.++++|++++|++|.+++.+.+.+ +|..+.++..+++++
T Consensus 249 PVVas~~~~l~Ei~g~~~~~Li~~~~v~~~~~~~~g~g~~~~~~d~~~la~ai~~~~~~~~~~--~~~~~~~~~a~~f~~ 326 (335)
T PHA01633 249 PVIHQLMPPLDEFTSWQWNLLIKSSKVEEYYDKEHGQKWKIHKFQIEDMANAIILAFELQDRE--ERSMKLKELAKKYDI 326 (335)
T ss_pred CEEEccCCCceeecCCccceeeCCCCHHHhcCcccCceeeecCCCHHHHHHHHHHHHhccChh--hhhHHHHHHHHhcCH
Confidence 666665554443222 145788999999999999998876432 334456677888887
Q ss_pred HHHHHHHH
Q 044635 516 GYWARSFL 523 (831)
Q Consensus 516 ~~W~~~~l 523 (831)
..-+++++
T Consensus 327 ~~~~~~~~ 334 (335)
T PHA01633 327 RNLYTRFL 334 (335)
T ss_pred HHHHHHhh
Confidence 77766654
No 95
>PLN02846 digalactosyldiacylglycerol synthase
Probab=99.59 E-value=3.6e-14 Score=161.12 Aligned_cols=182 Identities=13% Similarity=-0.017 Sum_probs=120.9
Q ss_pred eecccChHHHHHhhCCcchHHHHHHHHHHhccCC--cEEEEeccCcccccCHHHHHHHHHHHHHhCCCCCCcEEEEEEec
Q 044635 305 LPVGIHMGQLQSVLSLPGTEAKVSELIKQFHDQG--KVMLLGVDDMDIFKGISLKLLAMEQLLIQHPEWQGKVVLVQIAN 382 (831)
Q Consensus 305 ~P~GId~~~~~~~~~~~~~~~~~~~lr~~~~~~~--~~iil~VdRld~~KGi~~~l~A~~~lL~~~P~~~~~vvLvqig~ 382 (831)
.+.|||.+.|..... .+++.+.+.+ .+++++||||.+.||+..+|+||.++.+..|+++ |+++|
T Consensus 201 ~v~GVd~~~f~~~~~---------~~~~~~~~~~~~~~~~l~vGRL~~eK~~~~Li~a~~~l~~~~~~~~----l~ivG- 266 (462)
T PLN02846 201 NVHGVNPKFLEIGKL---------KLEQQKNGEQAFTKGAYYIGKMVWSKGYKELLKLLHKHQKELSGLE----VDLYG- 266 (462)
T ss_pred cCceechhhcCCCcc---------cHhhhcCCCCCcceEEEEEecCcccCCHHHHHHHHHHHHhhCCCeE----EEEEC-
Confidence 357999988753221 1222332122 4579999999999999999999999988888765 88888
Q ss_pred CCCCCchhHHHHHHHHHHHHHHHhccCCCCCCccEEEecCCCCHHHHHHHHHHcCEeEECCCccCCC---CCCCCCceEE
Q 044635 383 PARGRGKDVKEVQAETYSTVERINQTFGKPGYDPVVLIDEPLKFYERIAYYVVAECCLVTAVRDGSE---PSSPKKSMLV 459 (831)
Q Consensus 383 p~r~~~~~~~~l~~~i~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv~vvtS~~eGma---~~~~~~g~lV 459 (831)
+|++.+++++.+.+ .+ + .++++.|..+.+ ++|+.+|+||+||.+||+. .+++..|.+|
T Consensus 267 ----dGp~~~~L~~~a~~----l~-------l-~~~vf~G~~~~~---~~~~~~DvFv~pS~~Et~g~v~lEAmA~G~PV 327 (462)
T PLN02846 267 ----SGEDSDEVKAAAEK----LE-------L-DVRVYPGRDHAD---PLFHDYKVFLNPSTTDVVCTTTAEALAMGKIV 327 (462)
T ss_pred ----CCccHHHHHHHHHh----cC-------C-cEEEECCCCCHH---HHHHhCCEEEECCCcccchHHHHHHHHcCCcE
Confidence 67776555554443 22 2 144466654443 6899999999999999982 2344445444
Q ss_pred Eeccccccccc---CCCceeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHhhhhccCCHHHHHHHHHHHHH
Q 044635 460 VSEFIGCSPSL---SGAIRVNPWNIDAVSDAMDSALEMADQEKQLRHEKHYRYVSTHDVGYWARSFLQDLE 527 (831)
Q Consensus 460 lSe~~G~~~~l---~~allVnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l~ 527 (831)
++...+..+.+ .+|+.+ .|.++++++|.++|+.++++... .. ...+++..=++++++.++
T Consensus 328 Va~~~~~~~~v~~~~ng~~~--~~~~~~a~ai~~~l~~~~~~~~~---~a---~~~~SWe~~~~~l~~~~~ 390 (462)
T PLN02846 328 VCANHPSNEFFKQFPNCRTY--DDGKGFVRATLKALAEEPAPLTD---AQ---RHELSWEAATERFLRVAD 390 (462)
T ss_pred EEecCCCcceeecCCceEec--CCHHHHHHHHHHHHccCchhHHH---HH---HHhCCHHHHHHHHHHHhc
Confidence 44444445555 355566 48999999999999855433221 11 136777777777776654
No 96
>cd03816 GT1_ALG1_like This family is most closely related to the GT1 family of glycosyltransferases. The yeast gene ALG1 has been shown to function as a mannosyltransferase that catalyzes the formation of dolichol pyrophosphate (Dol-PP)-GlcNAc2Man from GDP-Man and Dol-PP-Glc-NAc2, and participates in the formation of the lipid-linked precursor oligosaccharide for N-glycosylation. In humans ALG1 has been associated with the congenital disorders of glycosylation (CDG) designated as subtype CDG-Ik.
Probab=99.58 E-value=1.4e-13 Score=157.09 Aligned_cols=263 Identities=10% Similarity=0.021 Sum_probs=157.4
Q ss_pred CCEEEEeCcccc--chHHHHHhhcCCCeEEEEEeccCCChHHhhcCCCh-------HHHHHHH-hcCCeEeecCHHhHHH
Q 044635 202 DDFVWVHDYHLM--VLPTFLRKRFNRVKLGFFLHSPFPSSEIYKTLPIR-------EEILRAL-LNSDLIGFHTFDYARH 271 (831)
Q Consensus 202 ~d~vwvhDyhL~--llp~~lr~~~~~~~i~~flH~PfP~~e~f~~lp~r-------~eil~~l-l~~dligf~t~~~~~~ 271 (831)
.|+|.+|..... .+...+-.+..+.|+.+.+|--+++..-. ..+.. ..+-+-+ -.||.|-..+....+.
T Consensus 96 ~Dvi~~~~~~~~~~~~~a~~~~~~~~~~~V~~~h~~~~~~~~~-~~~~~~~~~~~~~~~e~~~~~~ad~ii~vS~~~~~~ 174 (415)
T cd03816 96 ADYILIQNPPSIPTLLIAWLYCLLRRTKLIIDWHNYGYTILAL-KLGENHPLVRLAKWYEKLFGRLADYNLCVTKAMKED 174 (415)
T ss_pred CCEEEEeCCCCchHHHHHHHHHHHhCCeEEEEcCCchHHHHhc-ccCCCCHHHHHHHHHHHHHhhcCCEeeecCHHHHHH
Confidence 489999975432 22233334445789999999644321100 01100 0111111 2367776666543333
Q ss_pred HHHHHHHHhCCeecccCceeeEEEcCEEEEEEEeecccChHHHHHhhCCcchHHHHHHHHH-------------Hhc--c
Q 044635 272 FLSCCSRMLGLTYESKRGYIGLEYYGRTVSIKILPVGIHMGQLQSVLSLPGTEAKVSELIK-------------QFH--D 336 (831)
Q Consensus 272 Fl~~~~r~l~~~~~~~~~~~~~~~~gr~~~i~v~P~GId~~~~~~~~~~~~~~~~~~~lr~-------------~~~--~ 336 (831)
+.+ ++....+|.++|+| +...|.+... ........+ ..+ .
T Consensus 175 l~~--------------------~~~~~~ki~vI~Ng-~~~~f~p~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (415)
T cd03816 175 LQQ--------------------FNNWKIRATVLYDR-PPEQFRPLPL----EEKHELFLKLAKTFLTRELRIGAVQLSE 229 (415)
T ss_pred HHh--------------------hhccCCCeeecCCC-CHHHceeCcH----HHHHHHHHhccccccccccccccceecC
Confidence 221 11123467789998 4555543211 111111111 111 2
Q ss_pred CCcEEEEeccCcccccCHHHHHHHHHHHHHh------CCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhccCC
Q 044635 337 QGKVMLLGVDDMDIFKGISLKLLAMEQLLIQ------HPEWQGKVVLVQIANPARGRGKDVKEVQAETYSTVERINQTFG 410 (831)
Q Consensus 337 ~~~~iil~VdRld~~KGi~~~l~A~~~lL~~------~P~~~~~vvLvqig~p~r~~~~~~~~l~~~i~~lv~~IN~~~g 410 (831)
++..+++++||+.+.||+..+|+|+..+.+. +|+ +.|+++| +|+..+++++.+ ++.
T Consensus 230 ~~~~vi~~~grl~~~K~~~~li~A~~~l~~~~~~~~~~~~----i~l~ivG-----~G~~~~~l~~~~----~~~----- 291 (415)
T cd03816 230 ERPALLVSSTSWTPDEDFGILLDALVAYEKSAATGPKLPK----LLCIITG-----KGPLKEKYLERI----KEL----- 291 (415)
T ss_pred CCceEEEEeccccCCCCHHHHHHHHHHHHHhhcccccCCC----EEEEEEe-----cCccHHHHHHHH----HHc-----
Confidence 3457889999999999999999999998763 354 4599888 444444444444 332
Q ss_pred CCCCccEEEecCCCCHHHHHHHHHHcCEeEECC---CccCCC---CCCCC-CceEEEeccccccccc---CCCceeCCCC
Q 044635 411 KPGYDPVVLIDEPLKFYERIAYYVVAECCLVTA---VRDGSE---PSSPK-KSMLVVSEFIGCSPSL---SGAIRVNPWN 480 (831)
Q Consensus 411 ~~~~~pv~~~~~~v~~~el~aly~~ADv~vvtS---~~eGma---~~~~~-~g~lVlSe~~G~~~~l---~~allVnP~d 480 (831)
+...++++.+.++.+++..+|++||++|+++ ..+|+. .+++. +.|+|+|...|..+.+ .+|++|+ |
T Consensus 292 --~l~~~~~~~g~~~~~~~~~~l~~aDv~v~~~~~~~~~~~p~~~~Eama~G~PVI~s~~~~~~eiv~~~~~G~lv~--d 367 (415)
T cd03816 292 --KLKKVTIRTPWLSAEDYPKLLASADLGVSLHTSSSGLDLPMKVVDMFGCGLPVCALDFKCIDELVKHGENGLVFG--D 367 (415)
T ss_pred --CCCcEEEEcCcCCHHHHHHHHHhCCEEEEccccccccCCcHHHHHHHHcCCCEEEeCCCCHHHHhcCCCCEEEEC--C
Confidence 3346888888899999999999999998642 235541 11122 4577788877777666 3588884 8
Q ss_pred HHHHHHHHHHHhcCC--HHHHHHHHHHHhhhhcc
Q 044635 481 IDAVSDAMDSALEMA--DQEKQLRHEKHYRYVST 512 (831)
Q Consensus 481 ~~~~A~ai~~aL~m~--~~er~~r~~~~~~~v~~ 512 (831)
++++|++|.++++.+ +++++...+..++....
T Consensus 368 ~~~la~~i~~ll~~~~~~~~~~~m~~~~~~~~~~ 401 (415)
T cd03816 368 SEELAEQLIDLLSNFPNRGKLNSLKKGAQEESEL 401 (415)
T ss_pred HHHHHHHHHHHHhcCCCHHHHHHHHHHHHHhhhc
Confidence 999999999999872 55555555555655543
No 97
>cd03808 GT1_cap1E_like This family is most closely related to the GT1 family of glycosyltransferases. cap1E in Streptococcus pneumoniae is required for the synthesis of type 1 capsular polysaccharides.
Probab=99.58 E-value=1.6e-13 Score=150.14 Aligned_cols=272 Identities=15% Similarity=0.117 Sum_probs=177.3
Q ss_pred HHcCCCCCEEEEeCccccchHHHHHhhcCCCeEEEEEeccCCChHHhhcCC-ChHHH-HHHHhcCCeEeecCHHhHHHHH
Q 044635 196 EVINPEDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYKTLP-IREEI-LRALLNSDLIGFHTFDYARHFL 273 (831)
Q Consensus 196 ~~~~~~~d~vwvhDyhL~llp~~lr~~~~~~~i~~flH~PfP~~e~f~~lp-~r~ei-l~~ll~~dligf~t~~~~~~Fl 273 (831)
+..+| |+|++|..+..++..++.+.....++.+.+|...+......... ....+ -..+-.+|.+.+.+....+.+.
T Consensus 77 ~~~~~--dvv~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~ 154 (359)
T cd03808 77 RKERP--DIVHTHTPKPGILGRLAARLAGVPKVIYTVHGLGFVFTSGGLKRRLYLLLERLALRFTDKVIFQNEDDRDLAL 154 (359)
T ss_pred HhcCC--CEEEEccccchhHHHHHHHHcCCCCEEEEecCcchhhccchhHHHHHHHHHHHHHhhccEEEEcCHHHHHHHH
Confidence 33455 89999988877777777665666778888886433211100000 00111 1123357899988887777665
Q ss_pred HHHHHHhCCeecccCceeeEEEcCEEEEEEEeecccChHHHHHhhCCcchHHHHHHHHHHhccCCcEEEEeccCcccccC
Q 044635 274 SCCSRMLGLTYESKRGYIGLEYYGRTVSIKILPVGIHMGQLQSVLSLPGTEAKVSELIKQFHDQGKVMLLGVDDMDIFKG 353 (831)
Q Consensus 274 ~~~~r~l~~~~~~~~~~~~~~~~gr~~~i~v~P~GId~~~~~~~~~~~~~~~~~~~lr~~~~~~~~~iil~VdRld~~KG 353 (831)
+.- .. .....+.+.|+|+|...+..... . .. .++..++++||+.+.||
T Consensus 155 ~~~----~~--------------~~~~~~~~~~~~~~~~~~~~~~~-----~-------~~--~~~~~i~~~G~~~~~k~ 202 (359)
T cd03808 155 KLG----II--------------KKKKTVLIPGSGVDLDRFSPSPE-----P-------IP--EDDPVFLFVARLLKDKG 202 (359)
T ss_pred Hhc----CC--------------CcCceEEecCCCCChhhcCcccc-----c-------cC--CCCcEEEEEeccccccC
Confidence 411 00 01235667899999877642211 0 11 56789999999999999
Q ss_pred HHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhccCCCCCCccEEEecCCCCHHHHHHHH
Q 044635 354 ISLKLLAMEQLLIQHPEWQGKVVLVQIANPARGRGKDVKEVQAETYSTVERINQTFGKPGYDPVVLIDEPLKFYERIAYY 433 (831)
Q Consensus 354 i~~~l~A~~~lL~~~P~~~~~vvLvqig~p~r~~~~~~~~l~~~i~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~aly 433 (831)
+..+++|+..+.+++|+++ |+++|.... . ...... ++...+ . -..|.+ .+. .+++..+|
T Consensus 203 ~~~li~~~~~l~~~~~~~~----l~i~G~~~~---~--~~~~~~---~~~~~~----~--~~~v~~-~g~--~~~~~~~~ 261 (359)
T cd03808 203 IDELLEAARILKAKGPNVR----LLLVGDGDE---E--NPAAIL---EIEKLG----L--EGRVEF-LGF--RDDVPELL 261 (359)
T ss_pred HHHHHHHHHHHHhcCCCeE----EEEEcCCCc---c--hhhHHH---HHHhcC----C--cceEEE-eec--cccHHHHH
Confidence 9999999999988788765 888885331 1 111111 122211 1 113444 444 67899999
Q ss_pred HHcCEeEECCCccCCCC---CC-CCCceEEEeccccccccc---CCCceeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHH
Q 044635 434 VVAECCLVTAVRDGSEP---SS-PKKSMLVVSEFIGCSPSL---SGAIRVNPWNIDAVSDAMDSALEMADQEKQLRHEKH 506 (831)
Q Consensus 434 ~~ADv~vvtS~~eGma~---~~-~~~g~lVlSe~~G~~~~l---~~allVnP~d~~~~A~ai~~aL~m~~~er~~r~~~~ 506 (831)
+.||++++||.+||+.. ++ ..+.|+|+|...|..+.+ ..|+++++.|+++++++|.+++..+ +.+....+..
T Consensus 262 ~~adi~i~ps~~e~~~~~~~Ea~~~G~Pvi~s~~~~~~~~i~~~~~g~~~~~~~~~~~~~~i~~l~~~~-~~~~~~~~~~ 340 (359)
T cd03808 262 AAADVFVLPSYREGLPRVLLEAMAMGRPVIATDVPGCREAVIDGVNGFLVPPGDAEALADAIERLIEDP-ELRARMGQAA 340 (359)
T ss_pred HhccEEEecCcccCcchHHHHHHHcCCCEEEecCCCchhhhhcCcceEEECCCCHHHHHHHHHHHHhCH-HHHHHHHHHH
Confidence 99999999999998821 22 225578888888887776 3589999999999999999988654 4444445556
Q ss_pred hhh-hccCCHHHHHHHHH
Q 044635 507 YRY-VSTHDVGYWARSFL 523 (831)
Q Consensus 507 ~~~-v~~~~~~~W~~~~l 523 (831)
+++ ...++...+++.++
T Consensus 341 ~~~~~~~~s~~~~~~~~~ 358 (359)
T cd03808 341 RKRAEEEFDEEIVVKKLL 358 (359)
T ss_pred HHHHHHhcCHHHHHHHhh
Confidence 666 57788888877664
No 98
>PLN02501 digalactosyldiacylglycerol synthase
Probab=99.55 E-value=8.4e-14 Score=160.22 Aligned_cols=314 Identities=13% Similarity=0.138 Sum_probs=174.8
Q ss_pred EeCChHhhhhHhhhhhcccc--ccccccCCCCCCCCCCccChhhHHHHHHHHHHHHHHHHHHcCCCCCEEEEeCc-cccc
Q 044635 138 TFLPPDLFSRYYHGFCKQQL--WPLFHYMLPLSPDLGGRFNRSLWQAYVSVNKIFADRIMEVINPEDDFVWVHDY-HLMV 214 (831)
Q Consensus 138 v~l~~~~~~~~y~gf~~~~l--Wp~~H~~~~~~~~~~~~~~~~~w~~Y~~vN~~fa~~i~~~~~~~~d~vwvhDy-hL~l 214 (831)
+|=++++++.|......+-. -|-|-.. ++| ++|..+.- .-.-+-.. .+ .+...+| |+|.+|.- ||-.
T Consensus 379 ~F~~p~eQe~~ir~wl~~r~g~~~~~~i~--fYp---g~~~~~~~-SI~p~gdI-~~-~L~~f~P--DVVHLatP~~LGw 448 (794)
T PLN02501 379 TFSSPEEQESYIRNWLEERIGFKADFKIS--FYP---GKFSKERR-SIIPAGDT-SQ-FIPSKDA--DIAILEEPEHLNW 448 (794)
T ss_pred ccCCHHHHHHHHHHHHHHhcCCCCCceEE--eec---chhccCCc-cccchHHH-HH-HhhccCC--CEEEECCchhhcc
Confidence 78888888888877663321 1222111 222 33432211 11111111 11 1223344 89998853 3444
Q ss_pred h--HHHHHhhcCCCeEEEEEeccCCChHHhhcCCChHHHHHHHhcCCeEeecCHHhHHHHHHH--HHHHhCCeecccCce
Q 044635 215 L--PTFLRKRFNRVKLGFFLHSPFPSSEIYKTLPIREEILRALLNSDLIGFHTFDYARHFLSC--CSRMLGLTYESKRGY 290 (831)
Q Consensus 215 l--p~~lr~~~~~~~i~~flH~PfP~~e~f~~lp~r~eil~~ll~~dligf~t~~~~~~Fl~~--~~r~l~~~~~~~~~~ 290 (831)
. ....-+++. ++...+||.||.+=-+..+..-+.++. .++++|+.. |++++.++.....
T Consensus 449 ~~~Glr~ArKl~--PVVasyHTny~eYl~~y~~g~L~~~ll-------------k~l~~~v~r~hcD~VIaPS~atq~-- 511 (794)
T PLN02501 449 YHHGKRWTDKFN--HVVGVVHTNYLEYIKREKNGALQAFFV-------------KHINNWVTRAYCHKVLRLSAATQD-- 511 (794)
T ss_pred HHHHHHHHHHcC--CeEEEEeCCcHHHHhHhcchhHHHHHH-------------HHHHHHHHHhhCCEEEcCCHHHHH--
Confidence 4 222333443 699999999985322222221111111 233344443 6666665522211
Q ss_pred eeEEEcCEEEEEEEeecccChHHHHHhhCCcchHHHHHHHHHHhc-cCCcEEEEeccCcccccCHHHHHHHHHHHHHhCC
Q 044635 291 IGLEYYGRTVSIKILPVGIHMGQLQSVLSLPGTEAKVSELIKQFH-DQGKVMLLGVDDMDIFKGISLKLLAMEQLLIQHP 369 (831)
Q Consensus 291 ~~~~~~gr~~~i~v~P~GId~~~~~~~~~~~~~~~~~~~lr~~~~-~~~~~iil~VdRld~~KGi~~~l~A~~~lL~~~P 369 (831)
+. +. .|. ...|||++.|.+... ... +.+++ ....+.+++||||.+.||+..+|+|+..+.++.|
T Consensus 512 ----L~-~~-vI~-nVnGVDte~F~P~~r-------~~~-~r~lgi~~~~kgiLfVGRLa~EKGld~LLeAla~L~~~~p 576 (794)
T PLN02501 512 ----LP-KS-VIC-NVHGVNPKFLKIGEK-------VAE-ERELGQQAFSKGAYFLGKMVWAKGYRELIDLLAKHKNELD 576 (794)
T ss_pred ----hc-cc-cee-ecccccccccCCcch-------hHH-HHhcCCccccCceEEEEcccccCCHHHHHHHHHHHHhhCC
Confidence 11 11 111 115999998864321 011 13343 2233568999999999999999999999988888
Q ss_pred CCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhccCCCCCCccEEEecCCCCHHHHHHHHHHcCEeEECCCccCCC
Q 044635 370 EWQGKVVLVQIANPARGRGKDVKEVQAETYSTVERINQTFGKPGYDPVVLIDEPLKFYERIAYYVVAECCLVTAVRDGSE 449 (831)
Q Consensus 370 ~~~~~vvLvqig~p~r~~~~~~~~l~~~i~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv~vvtS~~eGma 449 (831)
+++ |+++| +|++.+++++. +.+.+ . .|+|+ +.. ++..++|+.|||||+||.+|||.
T Consensus 577 nvr----LvIVG-----DGP~reeLe~l----a~eLg-------L-~V~FL-G~~--dd~~~lyasaDVFVlPS~sEgFG 632 (794)
T PLN02501 577 GFN----LDVFG-----NGEDAHEVQRA----AKRLD-------L-NLNFL-KGR--DHADDSLHGYKVFINPSISDVLC 632 (794)
T ss_pred CeE----EEEEc-----CCccHHHHHHH----HHHcC-------C-EEEec-CCC--CCHHHHHHhCCEEEECCCcccch
Confidence 765 88888 56655455444 44322 1 25554 433 34458999999999999999992
Q ss_pred ---CCCCCCc-eEEEeccccccccc---CCCceeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHhhhhccCCHHHHHHHH
Q 044635 450 ---PSSPKKS-MLVVSEFIGCSPSL---SGAIRVNPWNIDAVSDAMDSALEMADQEKQLRHEKHYRYVSTHDVGYWARSF 522 (831)
Q Consensus 450 ---~~~~~~g-~lVlSe~~G~~~~l---~~allVnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~~ 522 (831)
.+++.+| |+|++...| .+.+ .++++ +.|+++++++|.++|..++. + ..++. ...+++..-++++
T Consensus 633 lVlLEAMA~GlPVVATd~pG-~e~V~~g~nGll--~~D~EafAeAI~~LLsd~~~-r-l~~~a----~~~~SWeAaadrL 703 (794)
T PLN02501 633 TATAEALAMGKFVVCADHPS-NEFFRSFPNCLT--YKTSEDFVAKVKEALANEPQ-P-LTPEQ----RYNLSWEAATQRF 703 (794)
T ss_pred HHHHHHHHcCCCEEEecCCC-CceEeecCCeEe--cCCHHHHHHHHHHHHhCchh-h-hHHHH----HhhCCHHHHHHHH
Confidence 2333345 666666655 4434 23433 37899999999999987652 2 22221 2366777767766
Q ss_pred HHHH
Q 044635 523 LQDL 526 (831)
Q Consensus 523 l~~l 526 (831)
++..
T Consensus 704 le~~ 707 (794)
T PLN02501 704 MEYS 707 (794)
T ss_pred HHhh
Confidence 6543
No 99
>PRK10125 putative glycosyl transferase; Provisional
Probab=99.55 E-value=1.9e-13 Score=155.07 Aligned_cols=182 Identities=12% Similarity=0.006 Sum_probs=115.2
Q ss_pred EEEEEeecccChHHHHHhhCCcchHHHHHHHHHHhccCCcEEEEeccC-c-ccccCHHHHHHHHHHHHHhCCCCCCcEEE
Q 044635 300 VSIKILPVGIHMGQLQSVLSLPGTEAKVSELIKQFHDQGKVMLLGVDD-M-DIFKGISLKLLAMEQLLIQHPEWQGKVVL 377 (831)
Q Consensus 300 ~~i~v~P~GId~~~~~~~~~~~~~~~~~~~lr~~~~~~~~~iil~VdR-l-d~~KGi~~~l~A~~~lL~~~P~~~~~vvL 377 (831)
.++.++|+|||++.+..... . ...+ . ..++++|++|+| + ++.||+..+++|+.++ .+ ++.|
T Consensus 212 ~~i~vI~NGid~~~~~~~~~---~----~~~~-~--~~~~~~il~v~~~~~~~~Kg~~~li~A~~~l---~~----~~~L 274 (405)
T PRK10125 212 GRCRIINNGIDMATEAILAE---L----PPVR-E--TQGKPKIAVVAHDLRYDGKTDQQLVREMMAL---GD----KIEL 274 (405)
T ss_pred CCEEEeCCCcCccccccccc---c----cccc-c--CCCCCEEEEEEeccccCCccHHHHHHHHHhC---CC----CeEE
Confidence 36788999999754321100 0 0101 1 156788999999 4 4789999999999875 23 3558
Q ss_pred EEEecCCCCCchhHHHHHHHHHHHHHHHhccCCCCCCccEEEecCCCCHHHHHHHHHHcCEeEECCCccCCC---CCCCC
Q 044635 378 VQIANPARGRGKDVKEVQAETYSTVERINQTFGKPGYDPVVLIDEPLKFYERIAYYVVAECCLVTAVRDGSE---PSSPK 454 (831)
Q Consensus 378 vqig~p~r~~~~~~~~l~~~i~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv~vvtS~~eGma---~~~~~ 454 (831)
+++|... ... . ..+.++....+..++..+|+.||+||+||..|||. .+++.
T Consensus 275 ~ivG~g~-----~~~-----------------~----~~v~~~g~~~~~~~l~~~y~~aDvfV~pS~~Egfp~vilEAmA 328 (405)
T PRK10125 275 HTFGKFS-----PFT-----------------A----GNVVNHGFETDKRKLMSALNQMDALVFSSRVDNYPLILCEALS 328 (405)
T ss_pred EEEcCCC-----ccc-----------------c----cceEEecCcCCHHHHHHHHHhCCEEEECCccccCcCHHHHHHH
Confidence 8888421 100 0 02444432346789999999999999999999992 23333
Q ss_pred -CceEEEeccccccccc--CCCceeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHhhh-hccCCHHHHHHHHHHHH
Q 044635 455 -KSMLVVSEFIGCSPSL--SGAIRVNPWNIDAVSDAMDSALEMADQEKQLRHEKHYRY-VSTHDVGYWARSFLQDL 526 (831)
Q Consensus 455 -~g~lVlSe~~G~~~~l--~~allVnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~-v~~~~~~~W~~~~l~~l 526 (831)
+.|+|+|..+|..+.+ .+|++|+|.|++++|+++...+... +........++. ...++....++++++-.
T Consensus 329 ~G~PVVat~~gG~~Eiv~~~~G~lv~~~d~~~La~~~~~~~~~~--~~~~~~~~~r~~~~~~fs~~~~~~~y~~lY 402 (405)
T PRK10125 329 IGVPVIATHSDAAREVLQKSGGKTVSEEEVLQLAQLSKPEIAQA--VFGTTLAEFSQRSRAAYSGQQMLEEYVNFY 402 (405)
T ss_pred cCCCEEEeCCCChHHhEeCCcEEEECCCCHHHHHhccCHHHHHH--hhhhHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 4577777777765555 4699999999999998654332110 000011223333 45688888777766544
No 100
>cd03811 GT1_WabH_like This family is most closely related to the GT1 family of glycosyltransferases. WabH in Klebsiella pneumoniae has been shown to transfer a GlcNAc residue from UDP-GlcNAc onto the acceptor GalUA residue in the cellular outer core.
Probab=99.54 E-value=3.3e-13 Score=146.94 Aligned_cols=237 Identities=17% Similarity=0.147 Sum_probs=154.2
Q ss_pred CEEEEeCc-cccchHHHHHhhcCCCeEEEEEeccCCChHHhhcCCChHHHHHHHhcCCeEeecCHHhHHHHHHHHHHHhC
Q 044635 203 DFVWVHDY-HLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYKTLPIREEILRALLNSDLIGFHTFDYARHFLSCCSRMLG 281 (831)
Q Consensus 203 d~vwvhDy-hL~llp~~lr~~~~~~~i~~flH~PfP~~e~f~~lp~r~eil~~ll~~dligf~t~~~~~~Fl~~~~r~l~ 281 (831)
|+|++|++ ...++..+ ..+. +.++.+.+|..++...... .+........+..+|.+-+.+....+.+.... +
T Consensus 83 dii~~~~~~~~~~~~~~-~~~~-~~~~i~~~~~~~~~~~~~~-~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~~----~ 155 (353)
T cd03811 83 DVVISHLTTTPNVLALL-AARL-GTKLIVWEHNSLSLELKRK-LRLLLLIRKLYRRADKIVAVSEGVKEDLLKLL----G 155 (353)
T ss_pred CEEEEcCccchhHHHHH-Hhhc-CCceEEEEcCcchhhhccc-hhHHHHHHhhccccceEEEeccchhhhHHHhh----c
Confidence 89999988 44444333 3333 7899999998776432211 11111234455668888887776665554321 0
Q ss_pred CeecccCceeeEEEcCEEEEEEEeecccChHHHHHhhCCcchHHHHHHHHHHhc-cCCcEEEEeccCcccccCHHHHHHH
Q 044635 282 LTYESKRGYIGLEYYGRTVSIKILPVGIHMGQLQSVLSLPGTEAKVSELIKQFH-DQGKVMLLGVDDMDIFKGISLKLLA 360 (831)
Q Consensus 282 ~~~~~~~~~~~~~~~gr~~~i~v~P~GId~~~~~~~~~~~~~~~~~~~lr~~~~-~~~~~iil~VdRld~~KGi~~~l~A 360 (831)
....++.++|+|+|...+..... .. . ++. ..++.+++++||+.+.||+..+++|
T Consensus 156 ---------------~~~~~~~vi~~~~~~~~~~~~~~-----~~--~---~~~~~~~~~~i~~~g~~~~~k~~~~~i~~ 210 (353)
T cd03811 156 ---------------IPPDKIEVIYNPIDIEEIRALAE-----EP--L---ELGIPPDGPVILAVGRLSPQKGFDTLIRA 210 (353)
T ss_pred ---------------CCccccEEecCCcChhhcCcccc-----hh--h---hcCCCCCceEEEEEecchhhcChHHHHHH
Confidence 01346778999999887643211 00 0 222 3678899999999999999999999
Q ss_pred HHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhccCCCCCCccEEEecCCCCHHHHHHHHHHcCEeE
Q 044635 361 MEQLLIQHPEWQGKVVLVQIANPARGRGKDVKEVQAETYSTVERINQTFGKPGYDPVVLIDEPLKFYERIAYYVVAECCL 440 (831)
Q Consensus 361 ~~~lL~~~P~~~~~vvLvqig~p~r~~~~~~~~l~~~i~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv~v 440 (831)
+.++.+++++++ |+++|. ++...+++ +++.+.+ ..+.+.+.+.+ +++..+|+.||+++
T Consensus 211 ~~~l~~~~~~~~----l~i~G~-----~~~~~~~~----~~~~~~~-------~~~~v~~~g~~--~~~~~~~~~~d~~i 268 (353)
T cd03811 211 FALLRKEGPDAR----LVILGD-----GPLREELE----ALAKELG-------LADRVHFLGFQ--SNPYPYLKAADLFV 268 (353)
T ss_pred HHHhhhcCCCce----EEEEcC-----CccHHHHH----HHHHhcC-------CCccEEEeccc--CCHHHHHHhCCEEE
Confidence 999988777665 888883 23333333 3333322 12333445553 46889999999999
Q ss_pred ECCCccCCCC---CCC-CCceEEEeccccccccc---CCCceeCCCCHHHHHHHHHHHhc
Q 044635 441 VTAVRDGSEP---SSP-KKSMLVVSEFIGCSPSL---SGAIRVNPWNIDAVSDAMDSALE 493 (831)
Q Consensus 441 vtS~~eGma~---~~~-~~g~lVlSe~~G~~~~l---~~allVnP~d~~~~A~ai~~aL~ 493 (831)
+||..||+.. ++. .+.|+|+|+..|..+.+ .+|++++|.|.+++++.+..+..
T Consensus 269 ~ps~~e~~~~~~~Ea~~~G~PvI~~~~~~~~e~i~~~~~g~~~~~~~~~~~~~~~~~i~~ 328 (353)
T cd03811 269 LSSRYEGFPNVLLEAMALGTPVVATDCPGPREILEDGENGLLVPVGDEAALAAAALALLD 328 (353)
T ss_pred eCcccCCCCcHHHHHHHhCCCEEEcCCCChHHHhcCCCceEEECCCCHHHHHHHHHHHHh
Confidence 9999999821 222 24577778777777666 35899999999999544444433
No 101
>cd03795 GT1_like_4 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP-linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=99.54 E-value=5.3e-13 Score=147.65 Aligned_cols=255 Identities=16% Similarity=0.130 Sum_probs=161.2
Q ss_pred CCEEEEeCccccchHHHHHhhcCCCeEEEEEeccCCChHHhhcCCC-hHHHHHHHhcCCeEeecCHHhHHHHHHHHHHHh
Q 044635 202 DDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYKTLPI-REEILRALLNSDLIGFHTFDYARHFLSCCSRML 280 (831)
Q Consensus 202 ~d~vwvhDyhL~llp~~lr~~~~~~~i~~flH~PfP~~e~f~~lp~-r~eil~~ll~~dligf~t~~~~~~Fl~~~~r~l 280 (831)
.|+|++|....+.....+... .+.+..+++|........+. .. +.-.-..+..+|.+.+.+..+.+.+.. .
T Consensus 84 ~Dii~~~~~~~~~~~~~~~~~-~~~~~i~~~h~~~~~~~~~~--~~~~~~~~~~~~~~d~vi~~s~~~~~~~~~----~- 155 (357)
T cd03795 84 ADVIHLHFPNPLADLALLLLP-RKKPVVVHWHSDIVKQKLLL--KLYRPLQRRFLRRADAIVATSPNYAETSPV----L- 155 (357)
T ss_pred CCEEEEecCcchHHHHHHHhc-cCceEEEEEcChhhccchhh--hhhhHHHHHHHHhcCEEEeCcHHHHHHHHH----h-
Confidence 389999976544332222222 46788889996432221110 11 111223455688888887766654432 0
Q ss_pred CCeecccCceeeEEEcCEEEEEEEeecccChHHHHHhhCCcchHHHHHHHHHHhccCCcEEEEeccCcccccCHHHHHHH
Q 044635 281 GLTYESKRGYIGLEYYGRTVSIKILPVGIHMGQLQSVLSLPGTEAKVSELIKQFHDQGKVMLLGVDDMDIFKGISLKLLA 360 (831)
Q Consensus 281 ~~~~~~~~~~~~~~~~gr~~~i~v~P~GId~~~~~~~~~~~~~~~~~~~lr~~~~~~~~~iil~VdRld~~KGi~~~l~A 360 (831)
.....++.++|+|+|...+..... . .. .......++.+|+++||+.+.||+..+++|
T Consensus 156 ---------------~~~~~~~~~i~~gi~~~~~~~~~~-----~-~~--~~~~~~~~~~~i~~~G~~~~~K~~~~li~a 212 (357)
T cd03795 156 ---------------RRFRDKVRVIPLGLDPARYPRPDA-----L-EE--AIWRRAAGRPFFLFVGRLVYYKGLDVLLEA 212 (357)
T ss_pred ---------------cCCccceEEecCCCChhhcCCcch-----h-hh--HhhcCCCCCcEEEEecccccccCHHHHHHH
Confidence 011146778999999887642111 0 01 111113567899999999999999999999
Q ss_pred HHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhccCCCCCCccEEEecCCCCHHHHHHHHHHcCEeE
Q 044635 361 MEQLLIQHPEWQGKVVLVQIANPARGRGKDVKEVQAETYSTVERINQTFGKPGYDPVVLIDEPLKFYERIAYYVVAECCL 440 (831)
Q Consensus 361 ~~~lL~~~P~~~~~vvLvqig~p~r~~~~~~~~l~~~i~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv~v 440 (831)
++++. ++.|+++|. ++... ++.+++.+. +..+-+.+.|.++.+++..+|+.||+++
T Consensus 213 ~~~l~--------~~~l~i~G~-----g~~~~----~~~~~~~~~-------~~~~~V~~~g~v~~~~~~~~~~~ad~~i 268 (357)
T cd03795 213 AAALP--------DAPLVIVGE-----GPLEA----ELEALAAAL-------GLLDRVRFLGRLDDEEKAALLAACDVFV 268 (357)
T ss_pred HHhcc--------CcEEEEEeC-----ChhHH----HHHHHHHhc-------CCcceEEEcCCCCHHHHHHHHHhCCEEE
Confidence 98873 455888883 33333 333333222 2223445678999999999999999999
Q ss_pred ECCC--ccCCCC---CCCC-CceEEEeccccccccc----CCCceeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHhhhh
Q 044635 441 VTAV--RDGSEP---SSPK-KSMLVVSEFIGCSPSL----SGAIRVNPWNIDAVSDAMDSALEMADQEKQLRHEKHYRYV 510 (831)
Q Consensus 441 vtS~--~eGma~---~~~~-~g~lVlSe~~G~~~~l----~~allVnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v 510 (831)
+||. .||+.. ++.. +.|+|+|+..|..+.+ ..|++++|.|+++++++|.++++.+ +++....++.++++
T Consensus 269 ~ps~~~~e~~g~~~~Ea~~~g~Pvi~~~~~~~~~~i~~~~~~g~~~~~~d~~~~~~~i~~l~~~~-~~~~~~~~~~~~~~ 347 (357)
T cd03795 269 FPSVERSEAFGIVLLEAMAFGKPVISTEIGTGGSYVNLHGVTGLVVPPGDPAALAEAIRRLLEDP-ELRERLGEAARERA 347 (357)
T ss_pred eCCcccccccchHHHHHHHcCCCEEecCCCCchhHHhhCCCceEEeCCCCHHHHHHHHHHHHHCH-HHHHHHHHHHHHHH
Confidence 9996 477621 2222 4567777766666655 2578999999999999999999854 44555555566665
Q ss_pred cc
Q 044635 511 ST 512 (831)
Q Consensus 511 ~~ 512 (831)
.+
T Consensus 348 ~~ 349 (357)
T cd03795 348 EE 349 (357)
T ss_pred HH
Confidence 44
No 102
>PHA01630 putative group 1 glycosyl transferase
Probab=99.52 E-value=9.3e-13 Score=145.31 Aligned_cols=207 Identities=14% Similarity=0.085 Sum_probs=138.8
Q ss_pred cCCeEeecCHHhHHHHHHHHHHHhCCeecccCceeeEEEcCEEEEEEEeecccChHHHHHhhCCcchHHHHHHHHHHhcc
Q 044635 257 NSDLIGFHTFDYARHFLSCCSRMLGLTYESKRGYIGLEYYGRTVSIKILPVGIHMGQLQSVLSLPGTEAKVSELIKQFHD 336 (831)
Q Consensus 257 ~~dligf~t~~~~~~Fl~~~~r~l~~~~~~~~~~~~~~~~gr~~~i~v~P~GId~~~~~~~~~~~~~~~~~~~lr~~~~~ 336 (831)
.+|.|-..+......+... +. ....++.++|+|||.+.|.+... ..
T Consensus 94 ~ad~ii~~S~~~~~~l~~~-----g~--------------~~~~~i~vIpNGVd~~~f~~~~~-------------~~-- 139 (331)
T PHA01630 94 PVDEIVVPSQWSKNAFYTS-----GL--------------KIPQPIYVIPHNLNPRMFEYKPK-------------EK-- 139 (331)
T ss_pred cCCEEEECCHHHHHHHHHc-----CC--------------CCCCCEEEECCCCCHHHcCCCcc-------------cc--
Confidence 4888888887665555421 11 00125778999999887742100 11
Q ss_pred CCcEEEEeccCcccccCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhccCCCCCCcc
Q 044635 337 QGKVMLLGVDDMDIFKGISLKLLAMEQLLIQHPEWQGKVVLVQIANPARGRGKDVKEVQAETYSTVERINQTFGKPGYDP 416 (831)
Q Consensus 337 ~~~~iil~VdRld~~KGi~~~l~A~~~lL~~~P~~~~~vvLvqig~p~r~~~~~~~~l~~~i~~lv~~IN~~~g~~~~~p 416 (831)
.++.++++++|+.+.||++.+|+|++++.+++|+++ |+++|.. .. +. ++. + + .+
T Consensus 140 ~~~~vl~~~g~~~~~Kg~d~Li~A~~~l~~~~~~~~----llivG~~-----~~--~~--~l~------~--~--~~--- 193 (331)
T PHA01630 140 PHPCVLAILPHSWDRKGGDIVVKIFHELQNEGYDFY----FLIKSSN-----ML--DP--RLF------G--L--NG--- 193 (331)
T ss_pred CCCEEEEEeccccccCCHHHHHHHHHHHHhhCCCEE----EEEEeCc-----cc--ch--hhc------c--c--cc---
Confidence 345677788899999999999999999988887655 8888821 11 11 110 0 0 11
Q ss_pred EEEecCCCCHHHHHHHHHHcCEeEECCCccCCC---CCCCC-CceEEEecccccccccC---C-----------------
Q 044635 417 VVLIDEPLKFYERIAYYVVAECCLVTAVRDGSE---PSSPK-KSMLVVSEFIGCSPSLS---G----------------- 472 (831)
Q Consensus 417 v~~~~~~v~~~el~aly~~ADv~vvtS~~eGma---~~~~~-~g~lVlSe~~G~~~~l~---~----------------- 472 (831)
+.+.++.+++..+|+.||+||+||..|||+ .+++. +.|+|+|..+|..+.+. +
T Consensus 194 ---~~~~v~~~~l~~~y~~aDv~v~pS~~E~fgl~~lEAMA~G~PVIas~~gg~~E~i~~~~ng~lv~~~~~~~~~~~~~ 270 (331)
T PHA01630 194 ---VKTPLPDDDIYSLFAGCDILFYPVRGGAFEIPVIEALALGLDVVVTEKGAWSEWVLSNLDVYWIKSGRKPKLWYTNP 270 (331)
T ss_pred ---eeccCCHHHHHHHHHhCCEEEECCccccCChHHHHHHHcCCCEEEeCCCCchhhccCCCceEEeeecccccccccCC
Confidence 134688999999999999999999999882 13333 45777777766666552 2
Q ss_pred ---CceeCCCCHHHHHHHHHHHhcCC-HHHHHHH-HHHHhhhhccCCHHHHHHHHHHHHH
Q 044635 473 ---AIRVNPWNIDAVSDAMDSALEMA-DQEKQLR-HEKHYRYVSTHDVGYWARSFLQDLE 527 (831)
Q Consensus 473 ---allVnP~d~~~~A~ai~~aL~m~-~~er~~r-~~~~~~~v~~~~~~~W~~~~l~~l~ 527 (831)
|++++| |.++++++|.++|..+ +++++.+ ........+++++...++++++-++
T Consensus 271 ~~~G~~v~~-~~~~~~~~ii~~l~~~~~~~~~~~~~~~~~~~~~~fs~~~ia~k~~~l~~ 329 (331)
T PHA01630 271 IHVGYFLDP-DIEDAYQKLLEALANWTPEKKKENLEGRAILYRENYSYNAIAKMWEKILE 329 (331)
T ss_pred cccccccCC-CHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHh
Confidence 445566 7888999999999864 2333333 3344556788999999998877664
No 103
>cd04955 GT1_like_6 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=99.51 E-value=1.6e-12 Score=144.24 Aligned_cols=264 Identities=13% Similarity=0.032 Sum_probs=161.1
Q ss_pred CEEEEeCccccchHHHHHhhcCCCeEEEEEeccCCChHHhhcCCChHHHH-----HHHhcCCeEeecCHHhHHHHHHHHH
Q 044635 203 DFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYKTLPIREEIL-----RALLNSDLIGFHTFDYARHFLSCCS 277 (831)
Q Consensus 203 d~vwvhDyhL~llp~~lr~~~~~~~i~~flH~PfP~~e~f~~lp~r~eil-----~~ll~~dligf~t~~~~~~Fl~~~~ 277 (831)
|+++||.......+....-+..+.++.+.+|..-.....+.. ....++ ..+-.+|.|-+.+....+.+..
T Consensus 86 ~~~~i~~~~~~~~~~~~~~~~~~~~~v~~~h~~~~~~~~~~~--~~~~~~~~~~~~~~~~ad~ii~~s~~~~~~~~~--- 160 (363)
T cd04955 86 DIDHVHALGPAIAPFLPLLRLKGKKVVVNMDGLEWKRAKWGR--PAKRYLKFGEKLAVKFADRLIADSPGIKEYLKE--- 160 (363)
T ss_pred CeEEEEecCccHHHHHHHHHhcCCCEEEEccCcceeeccccc--chhHHHHHHHHHHHhhccEEEeCCHHHHHHHHH---
Confidence 667777655543333222222367888888852111111100 011111 2344678888877655444321
Q ss_pred HHhCCeecccCceeeEEEcCEEEEEEEeecccChHHHHHhhCCcchHHHHHHHHHHhccCCcEEEEeccCcccccCHHHH
Q 044635 278 RMLGLTYESKRGYIGLEYYGRTVSIKILPVGIHMGQLQSVLSLPGTEAKVSELIKQFHDQGKVMLLGVDDMDIFKGISLK 357 (831)
Q Consensus 278 r~l~~~~~~~~~~~~~~~~gr~~~i~v~P~GId~~~~~~~~~~~~~~~~~~~lr~~~~~~~~~iil~VdRld~~KGi~~~ 357 (831)
.. |... .++|+|+|...+.. ....++.++..+++.++++||+.+.||+..+
T Consensus 161 -~~----------------~~~~--~~i~ngv~~~~~~~----------~~~~~~~~~~~~~~~i~~~G~~~~~Kg~~~l 211 (363)
T cd04955 161 -KY----------------GRDS--TYIPYGADHVVSSE----------EDEILKKYGLEPGRYYLLVGRIVPENNIDDL 211 (363)
T ss_pred -hc----------------CCCC--eeeCCCcChhhcch----------hhhhHHhcCCCCCcEEEEEecccccCCHHHH
Confidence 11 1111 67899999876532 0122333332345568899999999999999
Q ss_pred HHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhccCCCCCCccEEEecCCCCHHHHHHHHHHcC
Q 044635 358 LLAMEQLLIQHPEWQGKVVLVQIANPARGRGKDVKEVQAETYSTVERINQTFGKPGYDPVVLIDEPLKFYERIAYYVVAE 437 (831)
Q Consensus 358 l~A~~~lL~~~P~~~~~vvLvqig~p~r~~~~~~~~l~~~i~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~AD 437 (831)
++|+.++.. ++.|+++|... ...++.+++.+. ++. .+.+.+.|.++.+++..+|+.||
T Consensus 212 i~a~~~l~~-------~~~l~ivG~~~-----~~~~~~~~~~~~-------~~~---~~~V~~~g~~~~~~~~~~~~~ad 269 (363)
T cd04955 212 IEAFSKSNS-------GKKLVIVGNAD-----HNTPYGKLLKEK-------AAA---DPRIIFVGPIYDQELLELLRYAA 269 (363)
T ss_pred HHHHHhhcc-------CceEEEEcCCC-----CcchHHHHHHHH-------hCC---CCcEEEccccChHHHHHHHHhCC
Confidence 999987632 34588888532 112333333321 111 13345678999999999999999
Q ss_pred EeEECCCc-cCCC---CCCCC-CceEEEeccccccccc-CCCceeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHhhhhc
Q 044635 438 CCLVTAVR-DGSE---PSSPK-KSMLVVSEFIGCSPSL-SGAIRVNPWNIDAVSDAMDSALEMADQEKQLRHEKHYRYVS 511 (831)
Q Consensus 438 v~vvtS~~-eGma---~~~~~-~g~lVlSe~~G~~~~l-~~allVnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~ 511 (831)
++++||.. ||+. .++.. +.|+|+|...|..+.+ .++.+++|.|. +|++|.++++.++ .+....++.++.+.
T Consensus 270 ~~v~ps~~~e~~~~~~~EAma~G~PvI~s~~~~~~e~~~~~g~~~~~~~~--l~~~i~~l~~~~~-~~~~~~~~~~~~~~ 346 (363)
T cd04955 270 LFYLHGHSVGGTNPSLLEAMAYGCPVLASDNPFNREVLGDKAIYFKVGDD--LASLLEELEADPE-EVSAMAKAARERIR 346 (363)
T ss_pred EEEeCCccCCCCChHHHHHHHcCCCEEEecCCccceeecCCeeEecCchH--HHHHHHHHHhCHH-HHHHHHHHHHHHHH
Confidence 99999999 9882 12222 4577777776666655 56888888776 9999999998763 34444455566554
Q ss_pred -cCCHHHHHHHHHHH
Q 044635 512 -THDVGYWARSFLQD 525 (831)
Q Consensus 512 -~~~~~~W~~~~l~~ 525 (831)
.+++..-++++++-
T Consensus 347 ~~fs~~~~~~~~~~~ 361 (363)
T cd04955 347 EKYTWEKIADQYEEL 361 (363)
T ss_pred HhCCHHHHHHHHHHH
Confidence 47877777776654
No 104
>TIGR03087 stp1 sugar transferase, PEP-CTERM/EpsH1 system associated. Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.
Probab=99.51 E-value=2e-12 Score=146.78 Aligned_cols=186 Identities=12% Similarity=0.081 Sum_probs=125.5
Q ss_pred EEEEEeecccChHHHHHhhCCcchHHHHHHHHHHhccCCcEEEEeccCcccccCHHHHH----HHHHHHHHhCCCCCCcE
Q 044635 300 VSIKILPVGIHMGQLQSVLSLPGTEAKVSELIKQFHDQGKVMLLGVDDMDIFKGISLKL----LAMEQLLIQHPEWQGKV 375 (831)
Q Consensus 300 ~~i~v~P~GId~~~~~~~~~~~~~~~~~~~lr~~~~~~~~~iil~VdRld~~KGi~~~l----~A~~~lL~~~P~~~~~v 375 (831)
.++.++|+|||.+.|.+.... ...+ ..++++|+++||+++.||++.++ .++..+.+++|+++
T Consensus 196 ~~v~vipngvd~~~f~~~~~~----------~~~~-~~~~~~ilf~G~l~~~k~~~~l~~~~~~~~~~l~~~~p~~~--- 261 (397)
T TIGR03087 196 GRITAFPNGVDADFFSPDRDY----------PNPY-PPGKRVLVFTGAMDYWPNIDAVVWFAERVFPAVRARRPAAE--- 261 (397)
T ss_pred CCeEEeecccchhhcCCCccc----------cCCC-CCCCcEEEEEEecCCccCHHHHHHHHHHHHHHHHHHCCCcE---
Confidence 367788999999887532110 0112 24567899999999999999887 56667777889876
Q ss_pred EEEEEecCCCCCchhHHHHHHHHHHHHHHHhccCCCCCCccEEEecCCCCHHHHHHHHHHcCEeEECCC-ccCCC---CC
Q 044635 376 VLVQIANPARGRGKDVKEVQAETYSTVERINQTFGKPGYDPVVLIDEPLKFYERIAYYVVAECCLVTAV-RDGSE---PS 451 (831)
Q Consensus 376 vLvqig~p~r~~~~~~~~l~~~i~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv~vvtS~-~eGma---~~ 451 (831)
|+++|. ++. .++.++.. . ..|. +.|.++ ++..+|+.||++|+||. .||+. .+
T Consensus 262 -l~ivG~-----g~~-----~~~~~l~~----~------~~V~-~~G~v~--~~~~~~~~adv~v~Ps~~~eG~~~~~lE 317 (397)
T TIGR03087 262 -FYIVGA-----KPS-----PAVRALAA----L------PGVT-VTGSVA--DVRPYLAHAAVAVAPLRIARGIQNKVLE 317 (397)
T ss_pred -EEEECC-----CCh-----HHHHHhcc----C------CCeE-EeeecC--CHHHHHHhCCEEEecccccCCcccHHHH
Confidence 888883 222 12333211 0 1244 556776 68999999999999996 58882 23
Q ss_pred CCCCc-eEEEeccccccccc---CCCceeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHhhhh-ccCCHHHHHHHHHHHH
Q 044635 452 SPKKS-MLVVSEFIGCSPSL---SGAIRVNPWNIDAVSDAMDSALEMADQEKQLRHEKHYRYV-STHDVGYWARSFLQDL 526 (831)
Q Consensus 452 ~~~~g-~lVlSe~~G~~~~l---~~allVnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v-~~~~~~~W~~~~l~~l 526 (831)
++..| |+|+|.. |+.... ..++++. .|++++|++|.++++. ++.++...++.++++ ..+++...++++.+-+
T Consensus 318 Ama~G~PVV~t~~-~~~~i~~~~~~g~lv~-~~~~~la~ai~~ll~~-~~~~~~~~~~ar~~v~~~fsw~~~~~~~~~~l 394 (397)
T TIGR03087 318 AMAMAKPVVASPE-AAEGIDALPGAELLVA-ADPADFAAAILALLAN-PAEREELGQAARRRVLQHYHWPRNLARLDALL 394 (397)
T ss_pred HHHcCCCEEecCc-ccccccccCCcceEeC-CCHHHHHHHHHHHHcC-HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHh
Confidence 33344 5666654 322221 3578885 8999999999999974 445555666777777 5688888888775544
No 105
>COG0297 GlgA Glycogen synthase [Carbohydrate transport and metabolism]
Probab=99.51 E-value=1.7e-12 Score=147.55 Aligned_cols=294 Identities=18% Similarity=0.164 Sum_probs=190.5
Q ss_pred CCEEEEeCccccchHHHHHhh---cCCCeEEEEEec-----cCC-ChHHhhcCCC---h----------HHHHHHHhcCC
Q 044635 202 DDFVWVHDYHLMVLPTFLRKR---FNRVKLGFFLHS-----PFP-SSEIYKTLPI---R----------EEILRALLNSD 259 (831)
Q Consensus 202 ~d~vwvhDyhL~llp~~lr~~---~~~~~i~~flH~-----PfP-~~e~f~~lp~---r----------~eil~~ll~~d 259 (831)
.|+|.+||||..|+|.++++. ...++..|+.|. .|| ...-.-.||. . .-+--|+..+|
T Consensus 131 pDIvH~hDWqt~L~~~~lk~~~~~~~~i~tVfTIHNl~~qG~~~~~~~~~lgLp~~~~~~~~l~~~~~~~~lK~gi~~ad 210 (487)
T COG0297 131 PDIVHAHDWQTGLLPAYLKQRYRSGYIIPTVFTIHNLAYQGLFRLQYLEELGLPFEAYASFGLEFYGQISFLKGGLYYAD 210 (487)
T ss_pred CCEEEeecHHHHHHHHHHhhcccccccCCeEEEEeeceeecccchhhHHHhcCCHHHhhhceeeecCcchhhhhhheecc
Confidence 489999999999999999997 778999999993 233 1222223441 1 22334566678
Q ss_pred eEeecCHHhHHHHHHHHHHHhCCeecccCceeeEEEcCEEEEEEEeecccChHHHHHhhCC-----------cchHHHHH
Q 044635 260 LIGFHTFDYARHFLSCCSRMLGLTYESKRGYIGLEYYGRTVSIKILPVGIHMGQLQSVLSL-----------PGTEAKVS 328 (831)
Q Consensus 260 ligf~t~~~~~~Fl~~~~r~l~~~~~~~~~~~~~~~~gr~~~i~v~P~GId~~~~~~~~~~-----------~~~~~~~~ 328 (831)
.|.--++.|+..-.. ...|. ...-.+.+ +.-++.-+=+|||.....+.... +.-.....
T Consensus 211 ~vttVSptYa~Ei~t---~~~g~-----gl~g~l~~--~~~~l~GI~NgiD~~~wnp~~d~~~~~~y~~~~~~~k~~nk~ 280 (487)
T COG0297 211 AVTTVSPTYAGEIYT---PEYGE-----GLEGLLSW--RSGKLSGILNGIDYDLWNPETDPYIAANYSAEVLPAKAENKV 280 (487)
T ss_pred EEEEECHHHHHhhcc---ccccc-----cchhhhhh--ccccEEEEEeeEEecccCcccccchhccCCccchhhhHHHHH
Confidence 888777877765541 00000 00001111 11344455567776554321110 01223345
Q ss_pred HHHHHhc-c--CCcEEEEeccCcccccCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHH
Q 044635 329 ELIKQFH-D--QGKVMLLGVDDMDIFKGISLKLLAMEQLLIQHPEWQGKVVLVQIANPARGRGKDVKEVQAETYSTVERI 405 (831)
Q Consensus 329 ~lr~~~~-~--~~~~iil~VdRld~~KGi~~~l~A~~~lL~~~P~~~~~vvLvqig~p~r~~~~~~~~l~~~i~~lv~~I 405 (831)
.++++++ + .+.+++..|+|++..||++.+++|++.++++. ++ ||++|.+ -..++..+..++.++
T Consensus 281 ~L~~~~gL~~~~~~pl~~~vsRl~~QKG~dl~~~~i~~~l~~~--~~----~vilG~g-------d~~le~~~~~la~~~ 347 (487)
T COG0297 281 ALQERLGLDVDLPGPLFGFVSRLTAQKGLDLLLEAIDELLEQG--WQ----LVLLGTG-------DPELEEALRALASRH 347 (487)
T ss_pred HHHHHhCCCCCCCCcEEEEeeccccccchhHHHHHHHHHHHhC--ce----EEEEecC-------cHHHHHHHHHHHHhc
Confidence 6778887 3 25699999999999999999999999999987 55 8888843 146778888888887
Q ss_pred hccCCCCCCccEEEecCCCCHHHHHHHHHHcCEeEECCCccCCCC----CCCCCceEEEecccccccccC----------
Q 044635 406 NQTFGKPGYDPVVLIDEPLKFYERIAYYVVAECCLVTAVRDGSEP----SSPKKSMLVVSEFIGCSPSLS---------- 471 (831)
Q Consensus 406 N~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv~vvtS~~eGma~----~~~~~g~lVlSe~~G~~~~l~---------- 471 (831)
..++ .+.-..+..-...+|..||++++||..|++++ ...-++++|+.+.+|.++.+.
T Consensus 348 ~~~~---------~~~i~~~~~la~~i~agaD~~lmPSrfEPcGL~ql~amryGtvpIv~~tGGLadTV~~~~~~~~~~~ 418 (487)
T COG0297 348 PGRV---------LVVIGYDEPLAHLIYAGADVILMPSRFEPCGLTQLYAMRYGTLPIVRETGGLADTVVDRNEWLIQGV 418 (487)
T ss_pred CceE---------EEEeeecHHHHHHHHhcCCEEEeCCcCcCCcHHHHHHHHcCCcceEcccCCccceecCccchhccCc
Confidence 6533 22223456667889999999999999998843 123356999999999988762
Q ss_pred -CCceeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHhhhh--ccCCHHHHHHHHHHHHHH
Q 044635 472 -GAIRVNPWNIDAVSDAMDSALEMADQEKQLRHEKHYRYV--STHDVGYWARSFLQDLER 528 (831)
Q Consensus 472 -~allVnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v--~~~~~~~W~~~~l~~l~~ 528 (831)
+|+++.|.|+++++.||.+|+..-..... .++.....- ...++..=+.++..-.+.
T Consensus 419 gtGf~f~~~~~~~l~~al~rA~~~y~~~~~-~w~~~~~~~m~~d~sw~~sa~~y~~lY~~ 477 (487)
T COG0297 419 GTGFLFLQTNPDHLANALRRALVLYRAPPL-LWRKVQPNAMGADFSWDLSAKEYVELYKP 477 (487)
T ss_pred eeEEEEecCCHHHHHHHHHHHHHHhhCCHH-HHHHHHHhhcccccCchhHHHHHHHHHHH
Confidence 47888888999999999999875432221 022222222 344455555555444333
No 106
>COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=99.50 E-value=5.3e-13 Score=131.56 Aligned_cols=200 Identities=20% Similarity=0.217 Sum_probs=123.4
Q ss_pred CceeEEecCCCccCCCCCCCCCCCHHHHHHHHHHhhcCCCeEEEECCCCHhhHHHHhCCC--CCceEEecCCEEEEeCCC
Q 044635 572 TTRAILLDYDGTLMPQASIDKSPNSKTIDILNSLCRDKNNMVFLVSAKSRKTLAEWFSPC--ENLGIAAEHGYFFRLRRD 649 (831)
Q Consensus 572 ~~rli~~D~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~~--~~~~liaenGa~i~~~~~ 649 (831)
..++||+|+||||+++. .+. +.....+.+|.. .|..|++||..+...+..+-..+ ++.++|+|||+.|+.+.+
T Consensus 6 ~~~lIFtDlD~TLl~~~-ye~---~pA~pv~~el~d-~G~~Vi~~SSKT~aE~~~l~~~l~v~~~p~iaEnG~aI~~p~~ 80 (274)
T COG3769 6 MPLLIFTDLDGTLLPHS-YEW---QPAAPVLLELKD-AGVPVILCSSKTRAEMLYLQKSLGVQGLPLIAENGAAIYLPKG 80 (274)
T ss_pred cceEEEEcccCcccCCC-CCC---CccchHHHHHHH-cCCeEEEeccchHHHHHHHHHhcCCCCCceeecCCceEEeccc
Confidence 46899999999999921 233 334445666654 69999999999999888777665 568999999999998743
Q ss_pred ceEEEcCC---------cCCc-cHHHHHHHHHHHHhccCCCeeEeeccceEEEeeccCCCc-------------cchHHH
Q 044635 650 EEWETCIP---------VADC-GWKQIAEPVMKLYTETTDGSTIEDKETALVWSYEDADPD-------------FGSCQA 706 (831)
Q Consensus 650 ~~w~~~~~---------~~~~-~w~~~v~~il~~~~e~~~gs~ie~k~~~l~~~~~~~d~~-------------~~~~~a 706 (831)
|..... .... .-.+.+.+.++...+...-.+....+....-.+....++ ...+..
T Consensus 81 --~~~~~~~~r~~~g~~~~elg~~l~~ire~l~kLee~~g~~~~~~~d~~ei~e~TGlpre~aaLa~~rEyseti~~rs~ 158 (274)
T COG3769 81 --WFPFDGKPREISGISHIELGKVLEKIREKLDKLEEHFGFTTFDDVDDEEIAEWTGLPREQAALAMLREYSETIIWRSS 158 (274)
T ss_pred --ccccCCCCceecceEeeehhhhHHHHHHHHHHHHHHhCeeEeccCCHHHHHHHhCCChHHhHHHHHHHhhhheeeccc
Confidence 322100 0000 011233333333322211111111000000000000000 001112
Q ss_pred HHHHHHHHhHhcCCCeEEEEcCeEEEEEeCCCCHHHHHHHHHHHhhhcCCCcccEEEEcCCchhHHHHHHcch
Q 044635 707 KELLDHLESVLANEPVTVKSGQNLVEVKPQGVNKGLVAKRLLSTMQEREMLPDFVLCVGDDRSDEDMFEVIIS 779 (831)
Q Consensus 707 ~el~~~L~~~l~~~~v~v~~g~~~vEV~p~gvnKG~al~~Ll~~l~~~g~~~d~vla~GD~~NDe~Mf~~a~~ 779 (831)
++...++...+...++.++.|..+.-|......||.|++++++.+...+- ..-++++||+.||.+||+.+..
T Consensus 159 d~~~~~~~~~L~e~glt~v~garf~~v~~as~gKg~Aa~~ll~~y~rl~~-~r~t~~~GDg~nD~Pl~ev~d~ 230 (274)
T COG3769 159 DERMAQFTARLNERGLTFVHGARFWHVLDASAGKGQAANWLLETYRRLGG-ARTTLGLGDGPNDAPLLEVMDY 230 (274)
T ss_pred chHHHHHHHHHHhcCceEEeccceEEEeccccCccHHHHHHHHHHHhcCc-eeEEEecCCCCCcccHHHhhhh
Confidence 23445566667667788999999998999999999999999998754332 2259999999999999999975
No 107
>cd03804 GT1_wbaZ_like This family is most closely related to the GT1 family of glycosyltransferases. wbaZ in Salmonella enterica has been shown to possess the mannosyl transferase activity. The members of this family are found in certain bacteria and Archaea.
Probab=99.49 E-value=2.2e-12 Score=143.52 Aligned_cols=241 Identities=15% Similarity=0.110 Sum_probs=152.1
Q ss_pred CCEEEEeCccccchHHHHHhhcCCCeEEEEEeccCC----ChH-HhhcCCC-------------hHHHHHHHhcCCeEee
Q 044635 202 DDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFP----SSE-IYKTLPI-------------REEILRALLNSDLIGF 263 (831)
Q Consensus 202 ~d~vwvhDyhL~llp~~lr~~~~~~~i~~flH~PfP----~~e-~f~~lp~-------------r~eil~~ll~~dligf 263 (831)
.|+|.++.. .+....+ ..++.+..+++|.|.+ ..+ .....+. +....+.+-.+|.|..
T Consensus 84 ~D~v~~~~~--~~~~~~~--~~~~~~~~~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~ 159 (351)
T cd03804 84 YDLVISSSH--AVAKGVI--TRPDQLHICYCHTPMRYAWDLYHDYLKESGLGKRLALRLLLHYLRIWDRRSAARVDYFIA 159 (351)
T ss_pred CCEEEEcCc--HHhcccc--CCCCCcEEEEeCCchHHHhcCchHhhhhcccchhhHHHHHHHHHHHHHHHHhcCCCEEEE
Confidence 488877643 2222222 4457788888898631 111 1111111 0111233457788888
Q ss_pred cCHHhHHHHHHHHHHHhCCeecccCceeeEEEcCEEEEEEEeecccChHHHHHhhCCcchHHHHHHHHHHhccCCcEEEE
Q 044635 264 HTFDYARHFLSCCSRMLGLTYESKRGYIGLEYYGRTVSIKILPVGIHMGQLQSVLSLPGTEAKVSELIKQFHDQGKVMLL 343 (831)
Q Consensus 264 ~t~~~~~~Fl~~~~r~l~~~~~~~~~~~~~~~~gr~~~i~v~P~GId~~~~~~~~~~~~~~~~~~~lr~~~~~~~~~iil 343 (831)
.+....+.+... . +. ...++|+|+|.+.|.... ..+++++
T Consensus 160 ~S~~~~~~~~~~----~----------------~~--~~~vi~~~~d~~~~~~~~------------------~~~~~il 199 (351)
T cd03804 160 NSRFVARRIKKY----Y----------------GR--DATVIYPPVDTDRFTPAE------------------EKEDYYL 199 (351)
T ss_pred CCHHHHHHHHHH----h----------------CC--CcEEECCCCCHhhcCcCC------------------CCCCEEE
Confidence 777666555431 1 11 224678999987764210 2345789
Q ss_pred eccCcccccCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhccCCCCCCccEEEecCC
Q 044635 344 GVDDMDIFKGISLKLLAMEQLLIQHPEWQGKVVLVQIANPARGRGKDVKEVQAETYSTVERINQTFGKPGYDPVVLIDEP 423 (831)
Q Consensus 344 ~VdRld~~KGi~~~l~A~~~lL~~~P~~~~~vvLvqig~p~r~~~~~~~~l~~~i~~lv~~IN~~~g~~~~~pv~~~~~~ 423 (831)
++||+.+.||++.+++|++++ | ++ |+++|. ++..+++++ . .. ..|. +.|.
T Consensus 200 ~~G~~~~~K~~~~li~a~~~~----~-~~----l~ivG~-----g~~~~~l~~-------~------~~--~~V~-~~g~ 249 (351)
T cd03804 200 SVGRLVPYKRIDLAIEAFNKL----G-KR----LVVIGD-----GPELDRLRA-------K------AG--PNVT-FLGR 249 (351)
T ss_pred EEEcCccccChHHHHHHHHHC----C-Cc----EEEEEC-----ChhHHHHHh-------h------cC--CCEE-EecC
Confidence 999999999999999999875 4 44 888883 343333332 1 01 1354 5678
Q ss_pred CCHHHHHHHHHHcCEeEECCCccCCCC---CCCC-CceEEEeccccccccc---CCCceeCCCCHHHHHHHHHHHhcCCH
Q 044635 424 LKFYERIAYYVVAECCLVTAVRDGSEP---SSPK-KSMLVVSEFIGCSPSL---SGAIRVNPWNIDAVSDAMDSALEMAD 496 (831)
Q Consensus 424 v~~~el~aly~~ADv~vvtS~~eGma~---~~~~-~g~lVlSe~~G~~~~l---~~allVnP~d~~~~A~ai~~aL~m~~ 496 (831)
++.+++.++|+.||++++||. ||++. +++. +.|+|++..+|..+.+ .+|++++|.|++++|++|..+++.+.
T Consensus 250 ~~~~~~~~~~~~ad~~v~ps~-e~~g~~~~Eama~G~Pvi~~~~~~~~e~i~~~~~G~~~~~~~~~~la~~i~~l~~~~~ 328 (351)
T cd03804 250 VSDEELRDLYARARAFLFPAE-EDFGIVPVEAMASGTPVIAYGKGGALETVIDGVTGILFEEQTVESLAAAVERFEKNED 328 (351)
T ss_pred CCHHHHHHHHHhCCEEEECCc-CCCCchHHHHHHcCCCEEEeCCCCCcceeeCCCCEEEeCCCCHHHHHHHHHHHHhCcc
Confidence 999999999999999999999 98832 2222 4577788877766666 35899999999999999999998774
Q ss_pred HHHHHHHHHHhhhhccCCHHHHHHH
Q 044635 497 QEKQLRHEKHYRYVSTHDVGYWARS 521 (831)
Q Consensus 497 ~er~~r~~~~~~~v~~~~~~~W~~~ 521 (831)
.. .+.+++...++++....++
T Consensus 329 ~~----~~~~~~~~~~~~~~~~~~~ 349 (351)
T cd03804 329 FD----PQAIRAHAERFSESRFREK 349 (351)
T ss_pred cC----HHHHHHHHHhcCHHHHHHH
Confidence 11 2233444455555555443
No 108
>cd03825 GT1_wcfI_like This family is most closely related to the GT1 family of glycosyltransferases. wcfI in Bacteroides fragilis has been shown to be involved in the capsular polysaccharide biosynthesis.
Probab=99.47 E-value=4.2e-12 Score=140.87 Aligned_cols=192 Identities=15% Similarity=0.131 Sum_probs=132.3
Q ss_pred EEEEEeecccChHHHHHhhCCcchHHHHHHHHHHhc-cCCcEEEEeccCccc--ccCHHHHHHHHHHHHHh-CCCCCCcE
Q 044635 300 VSIKILPVGIHMGQLQSVLSLPGTEAKVSELIKQFH-DQGKVMLLGVDDMDI--FKGISLKLLAMEQLLIQ-HPEWQGKV 375 (831)
Q Consensus 300 ~~i~v~P~GId~~~~~~~~~~~~~~~~~~~lr~~~~-~~~~~iil~VdRld~--~KGi~~~l~A~~~lL~~-~P~~~~~v 375 (831)
.++.++|+|||...+.+.. ....++.++ +.++.+++.+++... .||+..+++|++.+.++ .|+ +
T Consensus 159 ~~~~vi~ngi~~~~~~~~~--------~~~~~~~~~~~~~~~~i~~~~~~~~~~~K~~~~ll~a~~~l~~~~~~~----~ 226 (365)
T cd03825 159 IPIEVIPNGIDTTIFRPRD--------KREARKRLGLPADKKIILFGAVGGTDPRKGFDELIEALKRLAERWKDD----I 226 (365)
T ss_pred CceEEeCCCCcccccCCCc--------HHHHHHHhCCCCCCeEEEEEecCCCccccCHHHHHHHHHHhhhccCCC----e
Confidence 3678899999988764211 123455555 456677777777654 89999999999988665 344 5
Q ss_pred EEEEEecCCCCCchhHHHHHHHHHHHHHHHhccCCCCCCccEEEecCCCC-HHHHHHHHHHcCEeEECCCccCCCC---C
Q 044635 376 VLVQIANPARGRGKDVKEVQAETYSTVERINQTFGKPGYDPVVLIDEPLK-FYERIAYYVVAECCLVTAVRDGSEP---S 451 (831)
Q Consensus 376 vLvqig~p~r~~~~~~~~l~~~i~~lv~~IN~~~g~~~~~pv~~~~~~v~-~~el~aly~~ADv~vvtS~~eGma~---~ 451 (831)
.++++|... .... . . ....+.+.+.++ .+++..+|+.||++++||..||++. +
T Consensus 227 ~~~i~G~~~-----~~~~--~-------~---------~~~~v~~~g~~~~~~~~~~~~~~ad~~l~ps~~e~~g~~~~E 283 (365)
T cd03825 227 ELVVFGASD-----PEIP--P-------D---------LPFPVHYLGSLNDDESLALIYSAADVFVVPSLQENFPNTAIE 283 (365)
T ss_pred EEEEeCCCc-----hhhh--c-------c---------CCCceEecCCcCCHHHHHHHHHhCCEEEeccccccccHHHHH
Confidence 588888432 1000 0 0 112234566777 8899999999999999999999832 2
Q ss_pred CCC-CceEEEeccccccccc---CCCceeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHhhhh-ccCCHHHHHHHHHHHH
Q 044635 452 SPK-KSMLVVSEFIGCSPSL---SGAIRVNPWNIDAVSDAMDSALEMADQEKQLRHEKHYRYV-STHDVGYWARSFLQDL 526 (831)
Q Consensus 452 ~~~-~g~lVlSe~~G~~~~l---~~allVnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v-~~~~~~~W~~~~l~~l 526 (831)
+.. +.|+|++...|..+.+ ..|+++++.|++++|++|.++++.+ +++....++.++++ ..+++...++++++-+
T Consensus 284 am~~g~PvI~~~~~~~~e~~~~~~~g~~~~~~~~~~~~~~l~~l~~~~-~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~y 362 (365)
T cd03825 284 ALACGTPVVAFDVGGIPDIVDHGVTGYLAKPGDPEDLAEGIEWLLADP-DEREELGEAARELAENEFDSRVQAKRYLSLY 362 (365)
T ss_pred HHhcCCCEEEecCCCChhheeCCCceEEeCCCCHHHHHHHHHHHHhCH-HHHHHHHHHHHHHHHHhcCHHHHHHHHHHHH
Confidence 222 4577777776666666 2589999999999999999999744 34444455566665 4678888888777654
Q ss_pred H
Q 044635 527 E 527 (831)
Q Consensus 527 ~ 527 (831)
+
T Consensus 363 ~ 363 (365)
T cd03825 363 E 363 (365)
T ss_pred h
Confidence 4
No 109
>cd03802 GT1_AviGT4_like This family is most closely related to the GT1 family of glycosyltransferases. aviGT4 in Streptomyces viridochromogenes has been shown to be involved in biosynthesis of oligosaccharide antibiotic avilamycin A. Inactivation of aviGT4 resulted in a mutant that accumulated a novel avilamycin derivative lacking the terminal eurekanate residue.
Probab=99.45 E-value=7.6e-12 Score=137.38 Aligned_cols=236 Identities=14% Similarity=0.035 Sum_probs=149.0
Q ss_pred CCEEEEeCccccchHHHHHhhcCCCeEEEEEeccCCChHHhhcCCChHHHHHHHhcCCeEeecCHHhHHHHHHHHHHHhC
Q 044635 202 DDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYKTLPIREEILRALLNSDLIGFHTFDYARHFLSCCSRMLG 281 (831)
Q Consensus 202 ~d~vwvhDyhL~llp~~lr~~~~~~~i~~flH~PfP~~e~f~~lp~r~eil~~ll~~dligf~t~~~~~~Fl~~~~r~l~ 281 (831)
-|+|.+|+....++ + .+..+.|+.+.+|..++.... .........+.+-+-+....+.+.
T Consensus 88 ~Divh~~~~~~~~~---~-~~~~~~~~v~~~h~~~~~~~~--------~~~~~~~~~~~~~~~s~~~~~~~~-------- 147 (335)
T cd03802 88 FDIVHNHSLHLPLP---F-ARPLPVPVVTTLHGPPDPELL--------KLYYAARPDVPFVSISDAQRRPWP-------- 147 (335)
T ss_pred CCEEEecCcccchh---h-hcccCCCEEEEecCCCCcccc--------hHHHhhCcCCeEEEecHHHHhhcc--------
Confidence 38999999888776 2 334578899999987653211 123333444444333322221110
Q ss_pred CeecccCceeeEEEcCEEEEEEEeecccChHHHHHhhCCcchHHHHHHHHHHhccCCcEEEEeccCcccccCHHHHHHHH
Q 044635 282 LTYESKRGYIGLEYYGRTVSIKILPVGIHMGQLQSVLSLPGTEAKVSELIKQFHDQGKVMLLGVDDMDIFKGISLKLLAM 361 (831)
Q Consensus 282 ~~~~~~~~~~~~~~~gr~~~i~v~P~GId~~~~~~~~~~~~~~~~~~~lr~~~~~~~~~iil~VdRld~~KGi~~~l~A~ 361 (831)
.. .++.++|+|+|.+.|.. .. .++.+++++||+.+.||+..+++|+
T Consensus 148 ---------------~~-~~~~vi~ngvd~~~~~~----------------~~--~~~~~i~~~Gr~~~~Kg~~~li~~~ 193 (335)
T cd03802 148 ---------------PL-PWVATVHNGIDLDDYPF----------------RG--PKGDYLLFLGRISPEKGPHLAIRAA 193 (335)
T ss_pred ---------------cc-cccEEecCCcChhhCCC----------------CC--CCCCEEEEEEeeccccCHHHHHHHH
Confidence 00 46778999999987742 01 4567899999999999999999987
Q ss_pred HHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhccCCCCCCccEEEecCCCCHHHHHHHHHHcCEeEE
Q 044635 362 EQLLIQHPEWQGKVVLVQIANPARGRGKDVKEVQAETYSTVERINQTFGKPGYDPVVLIDEPLKFYERIAYYVVAECCLV 441 (831)
Q Consensus 362 ~~lL~~~P~~~~~vvLvqig~p~r~~~~~~~~l~~~i~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv~vv 441 (831)
.+ ++++ |+++|.. +....+...+.+... ..+-+.+.|.++.+++..+|+.||++++
T Consensus 194 ~~-----~~~~----l~i~G~~-----~~~~~~~~~~~~~~~----------~~~~v~~~G~~~~~~~~~~~~~~d~~v~ 249 (335)
T cd03802 194 RR-----AGIP----LKLAGPV-----SDPDYFYREIAPELL----------DGPDIEYLGEVGGAEKAELLGNARALLF 249 (335)
T ss_pred Hh-----cCCe----EEEEeCC-----CCHHHHHHHHHHhcc----------cCCcEEEeCCCCHHHHHHHHHhCcEEEe
Confidence 54 3444 8888843 222222222222210 0123445678999999999999999999
Q ss_pred CCC-ccCCC---CCCCC-CceEEEecccccccccC---CCceeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHhhh-hcc
Q 044635 442 TAV-RDGSE---PSSPK-KSMLVVSEFIGCSPSLS---GAIRVNPWNIDAVSDAMDSALEMADQEKQLRHEKHYRY-VST 512 (831)
Q Consensus 442 tS~-~eGma---~~~~~-~g~lVlSe~~G~~~~l~---~allVnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~-v~~ 512 (831)
||. .||+. .+++. +.|+|+|...|..+.+. +|+++++ +++++++|.+++..+.+. .++. ..+
T Consensus 250 ps~~~E~~~~~~lEAma~G~PvI~~~~~~~~e~i~~~~~g~l~~~--~~~l~~~l~~l~~~~~~~-------~~~~~~~~ 320 (335)
T cd03802 250 PILWEEPFGLVMIEAMACGTPVIAFRRGAVPEVVEDGVTGFLVDS--VEELAAAVARADRLDRAA-------CRRRAERR 320 (335)
T ss_pred CCcccCCcchHHHHHHhcCCCEEEeCCCCchhheeCCCcEEEeCC--HHHHHHHHHHHhccHHHH-------HHHHHHHh
Confidence 997 58872 12333 44777777777766662 5889987 999999999987654321 1122 255
Q ss_pred CCHHHHHHHHHH
Q 044635 513 HDVGYWARSFLQ 524 (831)
Q Consensus 513 ~~~~~W~~~~l~ 524 (831)
+++..-++++++
T Consensus 321 ~s~~~~~~~~~~ 332 (335)
T cd03802 321 FSAARMVDDYLA 332 (335)
T ss_pred CCHHHHHHHHHH
Confidence 666665555544
No 110
>PLN02275 transferase, transferring glycosyl groups
Probab=99.45 E-value=8.9e-12 Score=140.17 Aligned_cols=232 Identities=9% Similarity=-0.058 Sum_probs=143.6
Q ss_pred CEEEEeCccccc--hHHHHHhhcCCCeEEEEEeccCCChHHhhc--C--CC----hHHHHHHH-hcCCeEeecCHHhHHH
Q 044635 203 DFVWVHDYHLMV--LPTFLRKRFNRVKLGFFLHSPFPSSEIYKT--L--PI----REEILRAL-LNSDLIGFHTFDYARH 271 (831)
Q Consensus 203 d~vwvhDyhL~l--lp~~lr~~~~~~~i~~flH~PfP~~e~f~~--l--p~----r~eil~~l-l~~dligf~t~~~~~~ 271 (831)
|+|++|..+.+. ++..+-.+..++|+.+.+|.-+.+ .+.. . +. ...+.+.+ -.+|.|-..+....+.
T Consensus 102 DvV~~~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~--~~~~~~~~~~~~~~~~~~~e~~~~~~ad~ii~~S~~~~~~ 179 (371)
T PLN02275 102 DVFLVQNPPSVPTLAVVKLACWLRRAKFVIDWHNFGYT--LLALSLGRSHPLVRLYRWYERHYGKMADGHLCVTKAMQHE 179 (371)
T ss_pred CEEEEeCCCCcHHHHHHHHHHHHhCCCEEEEcCCccHH--HHhcccCCCCHHHHHHHHHHHHHHhhCCEEEECCHHHHHH
Confidence 899999877533 233333444568899999965321 1110 0 00 01111121 2367777777655554
Q ss_pred HHHHHHHHhCCeecccCceeeEEEcCEEEEEEEeecccChHHHHHhhCCcchHHHHHHHHHHhccCCcEEEEeccCcccc
Q 044635 272 FLSCCSRMLGLTYESKRGYIGLEYYGRTVSIKILPVGIHMGQLQSVLSLPGTEAKVSELIKQFHDQGKVMLLGVDDMDIF 351 (831)
Q Consensus 272 Fl~~~~r~l~~~~~~~~~~~~~~~~gr~~~i~v~P~GId~~~~~~~~~~~~~~~~~~~lr~~~~~~~~~iil~VdRld~~ 351 (831)
..+. .|.. +.++|+|+ .+.|.+... . ..+......+++++||+.+.
T Consensus 180 l~~~--------------------~g~~--i~vi~n~~-~~~f~~~~~-----~------~~~~~~~~~~i~~~grl~~~ 225 (371)
T PLN02275 180 LDQN--------------------WGIR--ATVLYDQP-PEFFRPASL-----E------IRLRPNRPALVVSSTSWTPD 225 (371)
T ss_pred HHHh--------------------cCCC--eEEECCCC-HHHcCcCCc-----h------hcccCCCcEEEEEeCceecc
Confidence 4320 0111 56788884 455542211 0 11111345688899999999
Q ss_pred cCHHHHHHHHHHHHH-----------------hCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhccCCCCCC
Q 044635 352 KGISLKLLAMEQLLI-----------------QHPEWQGKVVLVQIANPARGRGKDVKEVQAETYSTVERINQTFGKPGY 414 (831)
Q Consensus 352 KGi~~~l~A~~~lL~-----------------~~P~~~~~vvLvqig~p~r~~~~~~~~l~~~i~~lv~~IN~~~g~~~~ 414 (831)
||+..+++|+..+.. ++|+ +.|+++| +|+..+++++++.++ +.
T Consensus 226 k~~~~li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~----i~l~ivG-----~G~~~~~l~~~~~~~-----------~l 285 (371)
T PLN02275 226 EDFGILLEAAVMYDRRVAARLNESDSASGKQSLYPR----LLFIITG-----KGPQKAMYEEKISRL-----------NL 285 (371)
T ss_pred CCHHHHHHHHHHHHhhhhhccccccccccccccCCC----eEEEEEe-----CCCCHHHHHHHHHHc-----------CC
Confidence 999999999988742 3454 5599998 555555555544442 33
Q ss_pred ccEEEecCCCCHHHHHHHHHHcCEeEECC---CccCCC---CCCCC-CceEEEeccccccccc---CCCceeCCCCHHHH
Q 044635 415 DPVVLIDEPLKFYERIAYYVVAECCLVTA---VRDGSE---PSSPK-KSMLVVSEFIGCSPSL---SGAIRVNPWNIDAV 484 (831)
Q Consensus 415 ~pv~~~~~~v~~~el~aly~~ADv~vvtS---~~eGma---~~~~~-~g~lVlSe~~G~~~~l---~~allVnP~d~~~~ 484 (831)
..++++.+.++.+++..+|+.||+||+++ ..|||. .+++. +.|+|+|...|..+.+ .+|++|+ |++++
T Consensus 286 ~~v~~~~~~~~~~~~~~~l~~aDv~v~~~~s~~~e~~p~~llEAmA~G~PVVa~~~gg~~eiv~~g~~G~lv~--~~~~l 363 (371)
T PLN02275 286 RHVAFRTMWLEAEDYPLLLGSADLGVSLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIGELVKDGKNGLLFS--SSSEL 363 (371)
T ss_pred CceEEEcCCCCHHHHHHHHHhCCEEEEeccccccccccHHHHHHHHCCCCEEEecCCChHHHccCCCCeEEEC--CHHHH
Confidence 45777777789999999999999999753 236661 12222 4577777776766666 3588986 69999
Q ss_pred HHHHHHHh
Q 044635 485 SDAMDSAL 492 (831)
Q Consensus 485 A~ai~~aL 492 (831)
|++|.++|
T Consensus 364 a~~i~~l~ 371 (371)
T PLN02275 364 ADQLLELL 371 (371)
T ss_pred HHHHHHhC
Confidence 99998765
No 111
>PRK05749 3-deoxy-D-manno-octulosonic-acid transferase; Reviewed
Probab=99.44 E-value=1.6e-11 Score=140.59 Aligned_cols=272 Identities=17% Similarity=0.193 Sum_probs=161.5
Q ss_pred HHHHHHHHcCCCCCEEEEeCccccchHHHHHh-hcCCCeEEEEEeccCC-ChHHhhcCCChHHHHHHHh-cCCeEeecCH
Q 044635 190 FADRIMEVINPEDDFVWVHDYHLMVLPTFLRK-RFNRVKLGFFLHSPFP-SSEIYKTLPIREEILRALL-NSDLIGFHTF 266 (831)
Q Consensus 190 fa~~i~~~~~~~~d~vwvhDyhL~llp~~lr~-~~~~~~i~~flH~PfP-~~e~f~~lp~r~eil~~ll-~~dligf~t~ 266 (831)
...++++.++| |+|++|++.++ |.++.. +..++|+.+..|.-.+ +...++.+ ..+.+.++ .+|.|..++.
T Consensus 115 ~~~~~l~~~~P--d~v~~~~~~~~--~~~l~~~~~~~ip~vl~~~~~~~~s~~~~~~~---~~~~r~~~~~~d~ii~~S~ 187 (425)
T PRK05749 115 AVRRFLRFWRP--KLVIIMETELW--PNLIAELKRRGIPLVLANARLSERSFKRYQKF---KRFYRLLFKNIDLVLAQSE 187 (425)
T ss_pred HHHHHHHhhCC--CEEEEEecchh--HHHHHHHHHCCCCEEEEeccCChhhHHHHHHH---HHHHHHHHHhCCEEEECCH
Confidence 34445666777 79999988765 555533 3346777776554222 22233222 22333333 3799999998
Q ss_pred HhHHHHHHHHHHHhCCeecccCceeeEEEcCEEEEEEEeecccChHHHHHhhCCcchHHHHHHHHHHhccCCcEEEEecc
Q 044635 267 DYARHFLSCCSRMLGLTYESKRGYIGLEYYGRTVSIKILPVGIHMGQLQSVLSLPGTEAKVSELIKQFHDQGKVMLLGVD 346 (831)
Q Consensus 267 ~~~~~Fl~~~~r~l~~~~~~~~~~~~~~~~gr~~~i~v~P~GId~~~~~~~~~~~~~~~~~~~lr~~~~~~~~~iil~Vd 346 (831)
...+.|.+ +|.. .. +.++|++ +.+.+. .+........++++++ .+++++++++
T Consensus 188 ~~~~~l~~-----~g~~---------------~~-i~vi~n~-~~d~~~----~~~~~~~~~~~r~~~~-~~~~vil~~~ 240 (425)
T PRK05749 188 EDAERFLA-----LGAK---------------NE-VTVTGNL-KFDIEV----PPELAARAATLRRQLA-PNRPVWIAAS 240 (425)
T ss_pred HHHHHHHH-----cCCC---------------CC-cEecccc-cccCCC----ChhhHHHHHHHHHHhc-CCCcEEEEeC
Confidence 88877754 2321 11 3344542 221111 1111123456677774 5678889998
Q ss_pred CcccccCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcc---CCCCCC----ccEEE
Q 044635 347 DMDIFKGISLKLLAMEQLLIQHPEWQGKVVLVQIANPARGRGKDVKEVQAETYSTVERINQT---FGKPGY----DPVVL 419 (831)
Q Consensus 347 Rld~~KGi~~~l~A~~~lL~~~P~~~~~vvLvqig~p~r~~~~~~~~l~~~i~~lv~~IN~~---~g~~~~----~pv~~ 419 (831)
+. .|+...+++||.++++++|+++ |+++| ++++. .+++.+++++.+-. +.. +. ...++
T Consensus 241 ~~--~~~~~~ll~A~~~l~~~~~~~~----liivG-----~g~~r---~~~l~~~~~~~gl~~~~~~~-~~~~~~~~~v~ 305 (425)
T PRK05749 241 TH--EGEEELVLDAHRALLKQFPNLL----LILVP-----RHPER---FKEVEELLKKAGLSYVRRSQ-GEPPSADTDVL 305 (425)
T ss_pred CC--chHHHHHHHHHHHHHHhCCCcE----EEEcC-----CChhh---HHHHHHHHHhCCCcEEEccC-CCCCCCCCcEE
Confidence 75 6889999999999998899876 88777 34442 12344444432211 100 00 01233
Q ss_pred ecCCCCHHHHHHHHHHcCEeEE-CCCccCCC---CCCCC-CceEEEecccccccc----c-CCCceeCCCCHHHHHHHHH
Q 044635 420 IDEPLKFYERIAYYVVAECCLV-TAVRDGSE---PSSPK-KSMLVVSEFIGCSPS----L-SGAIRVNPWNIDAVSDAMD 489 (831)
Q Consensus 420 ~~~~v~~~el~aly~~ADv~vv-tS~~eGma---~~~~~-~g~lVlSe~~G~~~~----l-~~allVnP~d~~~~A~ai~ 489 (831)
+.+ +..|+..+|+.||++++ +|+.||+. .+++. +.|+|.+...|...+ + .+|.++.|.|++++|++|.
T Consensus 306 l~~--~~~el~~~y~~aDi~~v~~S~~e~~g~~~lEAma~G~PVI~g~~~~~~~e~~~~~~~~g~~~~~~d~~~La~~l~ 383 (425)
T PRK05749 306 LGD--TMGELGLLYAIADIAFVGGSLVKRGGHNPLEPAAFGVPVISGPHTFNFKEIFERLLQAGAAIQVEDAEDLAKAVT 383 (425)
T ss_pred EEe--cHHHHHHHHHhCCEEEECCCcCCCCCCCHHHHHHhCCCEEECCCccCHHHHHHHHHHCCCeEEECCHHHHHHHHH
Confidence 332 36799999999999666 67778662 13333 346666654443322 2 4678888999999999999
Q ss_pred HHhcCCHHHHHHHHHHHhhhhccC
Q 044635 490 SALEMADQEKQLRHEKHYRYVSTH 513 (831)
Q Consensus 490 ~aL~m~~~er~~r~~~~~~~v~~~ 513 (831)
++++. ++.+....++.++++.++
T Consensus 384 ~ll~~-~~~~~~m~~~a~~~~~~~ 406 (425)
T PRK05749 384 YLLTD-PDARQAYGEAGVAFLKQN 406 (425)
T ss_pred HHhcC-HHHHHHHHHHHHHHHHhC
Confidence 99974 455555666777777665
No 112
>PF00534 Glycos_transf_1: Glycosyl transferases group 1; InterPro: IPR001296 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Proteins containign this domain transfer UDP, ADP, GDP or CMP linked sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. The bacterial enzymes are involved in various biosynthetic processes that include exopolysaccharide biosynthesis, lipopolysaccharide core biosynthesis and the biosynthesis of the slime polysaccaride colanic acid. Mutations in this domain of the human N-acetylglucosaminyl-phosphatidylinositol biosynthetic protein are the cause of paroxysmal nocturnal hemoglobinuria (PNH), an acquired hemolytic blood disorder characterised by venous thrombosis, erythrocyte hemolysis, infections and defective hematopoiesis.; GO: 0009058 biosynthetic process; PDB: 2L7C_A 2IV3_B 2IUY_B 2XA9_A 2XA1_B 2X6R_A 2XMP_B 2XA2_B 2X6Q_A 3QHP_B ....
Probab=99.40 E-value=1.9e-12 Score=128.68 Aligned_cols=147 Identities=18% Similarity=0.289 Sum_probs=105.8
Q ss_pred HHHHHhc-cCCcEEEEeccCcccccCHHHHHHHHHHHHHh-CCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHh
Q 044635 329 ELIKQFH-DQGKVMLLGVDDMDIFKGISLKLLAMEQLLIQ-HPEWQGKVVLVQIANPARGRGKDVKEVQAETYSTVERIN 406 (831)
Q Consensus 329 ~lr~~~~-~~~~~iil~VdRld~~KGi~~~l~A~~~lL~~-~P~~~~~vvLvqig~p~r~~~~~~~~l~~~i~~lv~~IN 406 (831)
.++.+.+ ..++++|+++||+++.||+..+++|+..+.++ .|++. |+++| .++.. ..+..++...+
T Consensus 4 ~~~~~~~~~~~~~~il~~g~~~~~K~~~~li~a~~~l~~~~~~~~~----l~i~G-----~~~~~----~~~~~~~~~~~ 70 (172)
T PF00534_consen 4 KLREKLKIPDKKKIILFIGRLDPEKGIDLLIEAFKKLKEKKNPNYK----LVIVG-----DGEYK----KELKNLIEKLN 70 (172)
T ss_dssp HHHHHTTT-TTSEEEEEESESSGGGTHHHHHHHHHHHHHHHHTTEE----EEEES-----HCCHH----HHHHHHHHHTT
T ss_pred HHHHHcCCCCCCeEEEEEecCccccCHHHHHHHHHHHHhhcCCCeE----EEEEc-----ccccc----ccccccccccc
Confidence 4455555 57899999999999999999999999999875 66654 88887 22222 33333433322
Q ss_pred ccCCCCCCccEEEecCCCCHHHHHHHHHHcCEeEECCCccCCCC---CC-CCCceEEEeccccccccc---CCCceeCCC
Q 044635 407 QTFGKPGYDPVVLIDEPLKFYERIAYYVVAECCLVTAVRDGSEP---SS-PKKSMLVVSEFIGCSPSL---SGAIRVNPW 479 (831)
Q Consensus 407 ~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv~vvtS~~eGma~---~~-~~~g~lVlSe~~G~~~~l---~~allVnP~ 479 (831)
. .. .+.++ +.++.+++.++|+.||++|.||..||++. ++ ..+.|+|+|...|..+.+ .+|++++|.
T Consensus 71 ~----~~--~i~~~-~~~~~~~l~~~~~~~di~v~~s~~e~~~~~~~Ea~~~g~pvI~~~~~~~~e~~~~~~~g~~~~~~ 143 (172)
T PF00534_consen 71 L----KE--NIIFL-GYVPDDELDELYKSSDIFVSPSRNEGFGLSLLEAMACGCPVIASDIGGNNEIINDGVNGFLFDPN 143 (172)
T ss_dssp C----GT--TEEEE-ESHSHHHHHHHHHHTSEEEE-BSSBSS-HHHHHHHHTT-EEEEESSTHHHHHSGTTTSEEEESTT
T ss_pred c----cc--ccccc-ccccccccccccccceeccccccccccccccccccccccceeeccccCCceeeccccceEEeCCC
Confidence 1 11 35554 46779999999999999999999999821 11 125688888866666666 346899999
Q ss_pred CHHHHHHHHHHHhcCC
Q 044635 480 NIDAVSDAMDSALEMA 495 (831)
Q Consensus 480 d~~~~A~ai~~aL~m~ 495 (831)
|+++++++|.+++.++
T Consensus 144 ~~~~l~~~i~~~l~~~ 159 (172)
T PF00534_consen 144 DIEELADAIEKLLNDP 159 (172)
T ss_dssp SHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHCCH
Confidence 9999999999999865
No 113
>cd04950 GT1_like_1 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center
Probab=99.25 E-value=3.2e-10 Score=127.63 Aligned_cols=263 Identities=12% Similarity=0.081 Sum_probs=151.7
Q ss_pred cCCCCCEEEEeCccccchHHHHHhhcCCCeEEEEEeccCCChHHhhcCCCh-HHHHHHHhcCCeEeecCHHhHHHHHHHH
Q 044635 198 INPEDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYKTLPIR-EEILRALLNSDLIGFHTFDYARHFLSCC 276 (831)
Q Consensus 198 ~~~~~d~vwvhDyhL~llp~~lr~~~~~~~i~~flH~PfP~~e~f~~lp~r-~eil~~ll~~dligf~t~~~~~~Fl~~~ 276 (831)
.+.++.++|.+.--...+... .+..++.|-+|=-|+..... -+.. ...-..+-.||+|-..+....+.+..
T Consensus 99 ~~~~~~i~~~~~P~~~~~~~~----~~~~~~Vyd~~D~~~~~~~~--~~~~~~~e~~~~~~ad~vi~~S~~l~~~~~~-- 170 (373)
T cd04950 99 LGFGRPILWYYTPYTLPVAAL----LQASLVVYDCVDDLSAFPGG--PPELLEAERRLLKRADLVFTTSPSLYEAKRR-- 170 (373)
T ss_pred cCCCCcEEEEeCccHHHHHhh----cCCCeEEEEcccchhccCCC--CHHHHHHHHHHHHhCCEEEECCHHHHHHHhh--
Confidence 344457888874333332222 45667777766444322110 0100 11223344589888777655543221
Q ss_pred HHHhCCeecccCceeeEEEcCEEEEEEEeecccChHHHHHhhCCcchHHHHHHHHHHhccCCcEEEEeccCcccccCHHH
Q 044635 277 SRMLGLTYESKRGYIGLEYYGRTVSIKILPVGIHMGQLQSVLSLPGTEAKVSELIKQFHDQGKVMLLGVDDMDIFKGISL 356 (831)
Q Consensus 277 ~r~l~~~~~~~~~~~~~~~~gr~~~i~v~P~GId~~~~~~~~~~~~~~~~~~~lr~~~~~~~~~iil~VdRld~~KGi~~ 356 (831)
+ + .++.++|+|+|.+.|......+.. .+... ..++++|+++|++++.+++.
T Consensus 171 ------------------~-~--~~i~~i~ngvd~~~f~~~~~~~~~------~~~~~-~~~~~~i~y~G~l~~~~d~~- 221 (373)
T cd04950 171 ------------------L-N--PNVVLVPNGVDYEHFAAARDPPPP------PADLA-ALPRPVIGYYGAIAEWLDLE- 221 (373)
T ss_pred ------------------C-C--CCEEEcccccCHHHhhcccccCCC------hhHHh-cCCCCEEEEEeccccccCHH-
Confidence 1 1 356789999999999643221110 11111 25678999999999976664
Q ss_pred HHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhccCCCCCCccEEEecCCCCHHHHHHHHHHc
Q 044635 357 KLLAMEQLLIQHPEWQGKVVLVQIANPARGRGKDVKEVQAETYSTVERINQTFGKPGYDPVVLIDEPLKFYERIAYYVVA 436 (831)
Q Consensus 357 ~l~A~~~lL~~~P~~~~~vvLvqig~p~r~~~~~~~~l~~~i~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~A 436 (831)
+|.+ +.+.+|+++ |++||... ...+. ..+ . ....|+ +.|.++.+++.++|+.|
T Consensus 222 ll~~---la~~~p~~~----~vliG~~~-----~~~~~----~~~----~------~~~nV~-~~G~~~~~~l~~~l~~~ 274 (373)
T cd04950 222 LLEA---LAKARPDWS----FVLIGPVD-----VSIDP----SAL----L------RLPNVH-YLGPKPYKELPAYLAGF 274 (373)
T ss_pred HHHH---HHHHCCCCE----EEEECCCc-----CccCh----hHh----c------cCCCEE-EeCCCCHHHHHHHHHhC
Confidence 3433 345678876 88888431 10010 111 0 112355 46789999999999999
Q ss_pred CEeEECCCccCC-----C---CCCCC-CceEEEecccccccccCCCceeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHh
Q 044635 437 ECCLVTAVRDGS-----E---PSSPK-KSMLVVSEFIGCSPSLSGAIRVNPWNIDAVSDAMDSALEMADQEKQLRHEKHY 507 (831)
Q Consensus 437 Dv~vvtS~~eGm-----a---~~~~~-~g~lVlSe~~G~~~~l~~allVnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~ 507 (831)
|++++|+..+.. . .+... +.|+|.|...++. ...++..+.+.|+++++++|.++|..+..++..+. .
T Consensus 275 Dv~l~P~~~~~~~~~~~P~Kl~EylA~G~PVVat~~~~~~-~~~~~~~~~~~d~~~~~~ai~~~l~~~~~~~~~~~---~ 350 (373)
T cd04950 275 DVAILPFRLNELTRATSPLKLFEYLAAGKPVVATPLPEVR-RYEDEVVLIADDPEEFVAAIEKALLEDGPARERRR---L 350 (373)
T ss_pred CEEecCCccchhhhcCCcchHHHHhccCCCEEecCcHHHH-hhcCcEEEeCCCHHHHHHHHHHHHhcCCchHHHHH---H
Confidence 999999864321 0 01222 4456655543332 23344555567999999999998865544433322 2
Q ss_pred hhhccCCHHHHHHHHHHHHHH
Q 044635 508 RYVSTHDVGYWARSFLQDLER 528 (831)
Q Consensus 508 ~~v~~~~~~~W~~~~l~~l~~ 528 (831)
+.+.+|++..=++.+++.|..
T Consensus 351 ~~~~~~sW~~~a~~~~~~l~~ 371 (373)
T cd04950 351 RLAAQNSWDARAAEMLEALQE 371 (373)
T ss_pred HHHHHCCHHHHHHHHHHHHHh
Confidence 267889988888888765543
No 114
>PLN02605 monogalactosyldiacylglycerol synthase
Probab=99.24 E-value=1.3e-09 Score=123.16 Aligned_cols=188 Identities=14% Similarity=0.120 Sum_probs=120.4
Q ss_pred EEEEeecccChHHHHHhhCCcchHHHHHHHHHHhc-cCCcEEEEeccCcccccCHHHHHHHHHHHHHh----CCCCCCcE
Q 044635 301 SIKILPVGIHMGQLQSVLSLPGTEAKVSELIKQFH-DQGKVMLLGVDDMDIFKGISLKLLAMEQLLIQ----HPEWQGKV 375 (831)
Q Consensus 301 ~i~v~P~GId~~~~~~~~~~~~~~~~~~~lr~~~~-~~~~~iil~VdRld~~KGi~~~l~A~~~lL~~----~P~~~~~v 375 (831)
+|.+++++|+...+... ....+++++++ ++++++|+.+||....||+...++++..++.. .|+.+
T Consensus 174 ki~v~g~~v~~~f~~~~-------~~~~~~r~~~gl~~~~~~il~~Gg~~g~~~~~~li~~l~~~~~~~~~~~~~~~--- 243 (382)
T PLN02605 174 QIRVYGLPIRPSFARAV-------RPKDELRRELGMDEDLPAVLLMGGGEGMGPLEETARALGDSLYDKNLGKPIGQ--- 243 (382)
T ss_pred HEEEECcccCHhhccCC-------CCHHHHHHHcCCCCCCcEEEEECCCcccccHHHHHHHHHHhhccccccCCCce---
Confidence 45667888886433211 11345778888 67889999999999999999999999876521 34332
Q ss_pred EEEEEecCCCCCchhHHHHHHHHHHHHHHHhccCCCCCCccEEEecCCCCHHHHHHHHHHcCEeEECCC----ccCCCCC
Q 044635 376 VLVQIANPARGRGKDVKEVQAETYSTVERINQTFGKPGYDPVVLIDEPLKFYERIAYYVVAECCLVTAV----RDGSEPS 451 (831)
Q Consensus 376 vLvqig~p~r~~~~~~~~l~~~i~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv~vvtS~----~eGma~~ 451 (831)
.++++| +++ ++++++.+... + ..|. +.|.++ ++..||++||++|.+|- .|.|++
T Consensus 244 ~~vi~G-----~~~---~~~~~L~~~~~------~----~~v~-~~G~~~--~~~~l~~aaDv~V~~~g~~ti~EAma~- 301 (382)
T PLN02605 244 VVVICG-----RNK---KLQSKLESRDW------K----IPVK-VRGFVT--NMEEWMGACDCIITKAGPGTIAEALIR- 301 (382)
T ss_pred EEEEEC-----CCH---HHHHHHHhhcc------c----CCeE-EEeccc--cHHHHHHhCCEEEECCCcchHHHHHHc-
Confidence 234444 222 23333433210 1 1344 455654 79999999999998652 344455
Q ss_pred CCCCceEEEecc-----ccccccc-CCCceeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHhhhhccCCHHHHHHHHH
Q 044635 452 SPKKSMLVVSEF-----IGCSPSL-SGAIRVNPWNIDAVSDAMDSALEMADQEKQLRHEKHYRYVSTHDVGYWARSFL 523 (831)
Q Consensus 452 ~~~~g~lVlSe~-----~G~~~~l-~~allVnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~~l 523 (831)
+.|+|++.. .|.++.+ .++.-+.+.|+++++++|.++|..++++++...+..++....+....-++.++
T Consensus 302 ---g~PvI~~~~~pgqe~gn~~~i~~~g~g~~~~~~~~la~~i~~ll~~~~~~~~~m~~~~~~~~~~~a~~~i~~~l~ 376 (382)
T PLN02605 302 ---GLPIILNGYIPGQEEGNVPYVVDNGFGAFSESPKEIARIVAEWFGDKSDELEAMSENALKLARPEAVFDIVHDLH 376 (382)
T ss_pred ---CCCEEEecCCCccchhhHHHHHhCCceeecCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcCCchHHHHHHHHH
Confidence 568888875 2434444 34444456899999999999998745555555566777777776665555444
No 115
>KOG1111 consensus N-acetylglucosaminyltransferase complex, subunit PIG-A/SPT14, required for phosphatidylinositol biosynthesis/Sulfolipid synthase [Cell wall/membrane/envelope biogenesis; Posttranslational modification, protein turnover, chaperones; Lipid transport and metabolism]
Probab=99.22 E-value=5.9e-11 Score=125.50 Aligned_cols=185 Identities=16% Similarity=0.150 Sum_probs=134.3
Q ss_pred HHHHHhCCeecccCceeeEEEcCEEEEEEEeecccChHHHHHhhCCcchHHHHHHHHHHhccCCcEEEEeccCcccccCH
Q 044635 275 CCSRMLGLTYESKRGYIGLEYYGRTVSIKILPVGIHMGQLQSVLSLPGTEAKVSELIKQFHDQGKVMLLGVDDMDIFKGI 354 (831)
Q Consensus 275 ~~~r~l~~~~~~~~~~~~~~~~gr~~~i~v~P~GId~~~~~~~~~~~~~~~~~~~lr~~~~~~~~~iil~VdRld~~KGi 354 (831)
-.+|.+++++.++.+. .+.-.-...++.++|+.++...|.+.... +. ..+...|+.++||-|.||+
T Consensus 145 ~id~~IcVshtskent-vlr~~L~p~kvsvIPnAv~~~~f~P~~~~------------~~-S~~i~~ivv~sRLvyrKGi 210 (426)
T KOG1111|consen 145 NIDRIICVSHTSKENT-VLRGALAPAKVSVIPNAVVTHTFTPDAAD------------KP-SADIITIVVASRLVYRKGI 210 (426)
T ss_pred CCCcEEEEeecCCCce-EEEeccCHhHeeeccceeeccccccCccc------------cC-CCCeeEEEEEeeeeeccch
Confidence 4566677788776653 23333344589999999999998753221 22 2455899999999999999
Q ss_pred HHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhccCCCCCCccEEEecCCCCHHHHHHHHH
Q 044635 355 SLKLLAMEQLLIQHPEWQGKVVLVQIANPARGRGKDVKEVQAETYSTVERINQTFGKPGYDPVVLIDEPLKFYERIAYYV 434 (831)
Q Consensus 355 ~~~l~A~~~lL~~~P~~~~~vvLvqig~p~r~~~~~~~~l~~~i~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~ 434 (831)
++++..+.++.++||+.+ ++++| +||....+++-+++. + -..+|++ .|.++++++-..|.
T Consensus 211 Dll~~iIp~vc~~~p~vr----fii~G-----DGPk~i~lee~lEk~----~------l~~rV~~-lG~v~h~~Vr~vl~ 270 (426)
T KOG1111|consen 211 DLLLEIIPSVCDKHPEVR----FIIIG-----DGPKRIDLEEMLEKL----F------LQDRVVM-LGTVPHDRVRDVLV 270 (426)
T ss_pred HHHHHHHHHHHhcCCCee----EEEec-----CCcccchHHHHHHHh----h------ccCceEE-ecccchHHHHHHHh
Confidence 999999999999999987 88888 666544555544443 1 1225554 56899999999999
Q ss_pred HcCEeEECCCccCCC---CCCCCCceEEEeccccccccc-CCC-ceeCCCCHHHHHHHHHHHhc
Q 044635 435 VAECCLVTAVRDGSE---PSSPKKSMLVVSEFIGCSPSL-SGA-IRVNPWNIDAVSDAMDSALE 493 (831)
Q Consensus 435 ~ADv~vvtS~~eGma---~~~~~~g~lVlSe~~G~~~~l-~~a-llVnP~d~~~~A~ai~~aL~ 493 (831)
..|||+-||+.|.|. .++..+|-.|+|..+|.-+++ ... +..-+-.++++++++.+|++
T Consensus 271 ~G~IFlntSlTEafc~~ivEAaScGL~VVsTrVGGIpeVLP~d~i~~~~~~~~dl~~~v~~ai~ 334 (426)
T KOG1111|consen 271 RGDIFLNTSLTEAFCMVIVEAASCGLPVVSTRVGGIPEVLPEDMITLGEPGPDDLVGAVEKAIT 334 (426)
T ss_pred cCcEEeccHHHHHHHHHHHHHHhCCCEEEEeecCCccccCCccceeccCCChHHHHHHHHHHHH
Confidence 999999999999771 133446877777776665554 444 43555578888888888876
No 116
>PF03332 PMM: Eukaryotic phosphomannomutase; InterPro: IPR005002 This enzyme (5.4.2.8 from EC) is involved in the synthesis of the GDP-mannose and dolichol-phosphate-mannose required for a number of critical mannosyl transfer reactions.; GO: 0004615 phosphomannomutase activity, 0019307 mannose biosynthetic process, 0005737 cytoplasm; PDB: 2I55_B 2I54_C 3F9R_A 2FUE_A 2FUC_A 2AMY_A 2Q4R_A.
Probab=99.01 E-value=5.9e-09 Score=105.16 Aligned_cols=193 Identities=17% Similarity=0.236 Sum_probs=130.6
Q ss_pred HHHHHHHHhhcCCCeEEEECCCCHhhHHHHhC-C-C--CCceEEecCCEEEEeCCCceEEEcCCc-C-CccHHHHHHHHH
Q 044635 598 TIDILNSLCRDKNNMVFLVSAKSRKTLAEWFS-P-C--ENLGIAAEHGYFFRLRRDEEWETCIPV-A-DCGWKQIAEPVM 671 (831)
Q Consensus 598 ~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~-~-~--~~~~liaenGa~i~~~~~~~w~~~~~~-~-~~~w~~~v~~il 671 (831)
+.++|.+|.+ ...|.|+||-....+++.+. . + ...++.++||...+..+...|...+.. . +...++.+.-++
T Consensus 1 M~~~L~~L~~--~~~vgvVgGsd~~k~~eQl~~~~~~~~fdy~f~enG~~~y~~~~~~~~~~~~~~lgee~~~~~in~~l 78 (220)
T PF03332_consen 1 MAELLQKLRK--KVPVGVVGGSDLPKIQEQLGGDDVLDNFDYVFPENGLVAYKNGELIWSQSIAEFLGEEKLQKLINFCL 78 (220)
T ss_dssp HHHHHHHHHT--TSEEEEEESS-HHHHHHHHSTTTHHHH-SEEEEGGGTEEEETTEEEEE--HHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHh--cCeEEEEcchhHHHHHHHHcccchHhhCCeeecCCCCeEEECCCchhhHhHHHHcCHHHHHHHHHHHH
Confidence 3578888875 89999999999999988884 3 2 245899999999999888888654421 1 112233344444
Q ss_pred HHHhc----cCCCeeEeeccceEEEee--ccCCC----ccch-----HHHHHHHHHHHhHhcCCCeEEE-EcCeEEEEEe
Q 044635 672 KLYTE----TTDGSTIEDKETALVWSY--EDADP----DFGS-----CQAKELLDHLESVLANEPVTVK-SGQNLVEVKP 735 (831)
Q Consensus 672 ~~~~e----~~~gs~ie~k~~~l~~~~--~~~d~----~~~~-----~~a~el~~~L~~~l~~~~v~v~-~g~~~vEV~p 735 (831)
++..+ ..-|.+||.+...+.+.- ++|.. .|.. ..-+.+.+.|++.+++..+.+. -|...+||.|
T Consensus 79 ~~~~~l~lp~krGtfIE~R~gmIn~SpiGr~a~~eer~~f~~~D~~~~iR~~~v~~L~~~f~d~~L~~siGGqiSiDvfp 158 (220)
T PF03332_consen 79 RYISDLDLPVKRGTFIEFRGGMINFSPIGRNASQEERDEFDEYDKKHKIREKLVEALKKEFPDFGLTFSIGGQISIDVFP 158 (220)
T ss_dssp HHHHT---S---S-SEEEESSEEEE-SS-TTS-HHHHHHHHHHHHHHTHHHHHHHHHHHHTCCCSEEEEEETTTEEEEEE
T ss_pred HHHHhCCCCccCCCceeecCCcEEECcccCcCCHHHHHhhhhcChhhhHHHHHHHHHHHHCCCCceEEecCCceEEcccc
Confidence 44333 234899999999888762 33321 1111 1124577788888888777655 5789999999
Q ss_pred CCCCHHHHHHHHHHHhhhcCCCcccEEEEcC----CchhHHHHHHcchhcCCCCCCCCCceEEEEeCCCCcccceEeCCh
Q 044635 736 QGVNKGLVAKRLLSTMQEREMLPDFVLCVGD----DRSDEDMFEVIISSMAGPSIAPRAEVFACTVGRKPSKAKYYLDDT 811 (831)
Q Consensus 736 ~gvnKG~al~~Ll~~l~~~g~~~d~vla~GD----~~NDe~Mf~~a~~~~~~~~~~~~~~~~~v~vG~~~s~A~y~l~d~ 811 (831)
+|++|..++++|.+. ..+.++.||| +.||.++|...+. .+.+ |.++
T Consensus 159 ~GwDKty~Lr~l~~~------~~~~I~FfGDkt~pGGNDyei~~~~rt-------------~g~~-----------V~~p 208 (220)
T PF03332_consen 159 KGWDKTYCLRHLEDE------GFDEIHFFGDKTFPGGNDYEIFEDPRT-------------IGHT-----------VTSP 208 (220)
T ss_dssp TT-SGGGGGGGTTTT------T-SEEEEEESS-STTSTTHHHHHSTTS-------------EEEE------------SSH
T ss_pred CCccHHHHHHHHHhc------ccceEEEEehhccCCCCCceeeecCCc-------------cEEE-----------eCCH
Confidence 999999999998653 2689999999 7899999987542 4454 4789
Q ss_pred hHHHHHHHHHH
Q 044635 812 VEIVRLMQGLA 822 (831)
Q Consensus 812 ~eV~~~L~~L~ 822 (831)
++-++.|+.|.
T Consensus 209 ~DT~~~l~~l~ 219 (220)
T PF03332_consen 209 EDTIKQLKELF 219 (220)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHh
Confidence 99999988875
No 117
>KOG3189 consensus Phosphomannomutase [Lipid transport and metabolism]
Probab=98.98 E-value=6.5e-09 Score=101.27 Aligned_cols=199 Identities=19% Similarity=0.213 Sum_probs=139.6
Q ss_pred HHHhcCceeEEecCCCccCCCCCCCCCCCHHHHHHHHHHhhcCCCeEEEECCCCHhhHHHHhCC-C--CCceEEecCCEE
Q 044635 567 AYKRTTTRAILLDYDGTLMPQASIDKSPNSKTIDILNSLCRDKNNMVFLVSAKSRKTLAEWFSP-C--ENLGIAAEHGYF 643 (831)
Q Consensus 567 ~y~~s~~rli~~D~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~-~--~~~~liaenGa~ 643 (831)
++++...-|+++|.||||++ .....++++.+.|++|.+ ...+.++-|-..+.+.+.++. + .-.+..+|||..
T Consensus 5 a~~r~~~~l~lfdvdgtLt~---~r~~~~~e~~~~l~~lr~--~v~ig~VggsDl~k~~eqlG~~Vl~~fDY~F~ENGl~ 79 (252)
T KOG3189|consen 5 AAARDEETLCLFDVDGTLTP---PRQKVTPEMLEFLQKLRK--KVTIGFVGGSDLSKQQEQLGDNVLEEFDYVFSENGLV 79 (252)
T ss_pred hhhcCCceEEEEecCCcccc---ccccCCHHHHHHHHHHhh--heEEEEeecHHHHHHHHHhchhHHhhhcccccCCCee
Confidence 45666778999999999999 788999999999999865 899999999999988888854 2 346888999998
Q ss_pred EEeCCCceEEE-cCCcC-CccHHHHHHHHHHHHhc----cCCCeeEeeccceEEEe--eccCCC----cc-----chHHH
Q 044635 644 FRLRRDEEWET-CIPVA-DCGWKQIAEPVMKLYTE----TTDGSTIEDKETALVWS--YEDADP----DF-----GSCQA 706 (831)
Q Consensus 644 i~~~~~~~w~~-~~~~~-~~~w~~~v~~il~~~~e----~~~gs~ie~k~~~l~~~--~~~~d~----~~-----~~~~a 706 (831)
-+..+...-.+ ..... +...++.+.-++.+..+ .-.|.+||.++..+... -|++.. +| .....
T Consensus 80 ~yk~gk~~~~Qsi~~~LGee~~q~liNF~LrYlsdidlPiKRGtFiEFRNgMiNvsPIGR~cs~EER~eF~e~Dkk~~iR 159 (252)
T KOG3189|consen 80 AYKGGKLLSKQSIINHLGEEKLQELINFCLRYLSDIDLPIKRGTFIEFRNGMINVSPIGRNCSQEERNEFEELDKKHKIR 159 (252)
T ss_pred EeeCCcchhHHHHHHHHhHHHHHHHHHHHHHHHHhcCCcccccceEEecCCceeccccccccCHHHHHHHHHhhhhhhhH
Confidence 77654322111 11111 11223333444444433 23489999887766543 233321 11 12233
Q ss_pred HHHHHHHHhHhcCCCeEEE-EcCeEEEEEeCCCCHHHHHHHHHHHhhhcCCCcccEEEEcC----CchhHHHHHH
Q 044635 707 KELLDHLESVLANEPVTVK-SGQNLVEVKPQGVNKGLVAKRLLSTMQEREMLPDFVLCVGD----DRSDEDMFEV 776 (831)
Q Consensus 707 ~el~~~L~~~l~~~~v~v~-~g~~~vEV~p~gvnKG~al~~Ll~~l~~~g~~~d~vla~GD----~~NDe~Mf~~ 776 (831)
+.+.+.|++.++++++... -|+-.++|.|.|++|..-++.+-.. ..+.+-.||| +.||.+.|.-
T Consensus 160 ~K~v~~Lr~~F~~~gLtFSIGGQISfDvFP~GWDKtyCLqhle~d------gf~~IhFFGDkT~~GGNDyEIf~d 228 (252)
T KOG3189|consen 160 EKFVEALREEFADYGLTFSIGGQISFDVFPKGWDKTYCLQHLEKD------GFDTIHFFGDKTMPGGNDYEIFAD 228 (252)
T ss_pred HHHHHHHHHHhcccCeeEEECCeEEEeecCCCcchhHHHHHhhhc------CCceEEEeccccCCCCCcceeeeC
Confidence 5677888888888887654 4678899999999999999888653 3588999999 6899888754
No 118
>cd03786 GT1_UDP-GlcNAc_2-Epimerase Bacterial members of the UDP-N-Acetylglucosamine (GlcNAc) 2-Epimerase family are known to catalyze the reversible interconversion of UDP-GlcNAc and UDP-N-acetylmannosamine (UDP-ManNAc). The enzyme serves to produce an activated form of ManNAc residues (UDP-ManNAc) for use in the biosynthesis of a variety of cell surface polysaccharides; The mammalian enzyme is bifunctional, catalyzing both the inversion of stereochemistry at C-2 and the hydrolysis of the UDP-sugar linkage to generate free ManNAc. It also catalyzes the phosphorylation of ManNAc to generate ManNAc 6-phosphate, a precursor to salic acids. In mammals, sialic acids are found at the termini of oligosaccharides in a large variety of cell surface glycoconjugates and are key mediators of cell-cell recognition events. Mutations in human members of this family have been associated with Sialuria, a rare disease caused by the disorders of sialic acid metabolism. This family belongs to the GT-B st
Probab=98.93 E-value=8.9e-08 Score=107.03 Aligned_cols=253 Identities=14% Similarity=0.068 Sum_probs=143.1
Q ss_pred HHHHHHHHHHHHHcCCCCCEEEEeCccccchHHHHHhhcCCCeEEEEEec--cCCChHHhhcCCCh--HHHHHHHhcCCe
Q 044635 185 SVNKIFADRIMEVINPEDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHS--PFPSSEIYKTLPIR--EEILRALLNSDL 260 (831)
Q Consensus 185 ~vN~~fa~~i~~~~~~~~d~vwvhDyhL~llp~~lr~~~~~~~i~~flH~--PfP~~e~f~~lp~r--~eil~~ll~~dl 260 (831)
.....+.+.+.+. +| |+|++|.+....++..+..+..++|+..+.|- .|- +..|+. ...+. -.+|.
T Consensus 75 ~~~~~l~~~l~~~-~p--DvV~~~g~~~~~~~~~~aa~~~~iPvv~~~~g~~s~~-----~~~~~~~~r~~~~--~~ad~ 144 (363)
T cd03786 75 GLLIGLEAVLLEE-KP--DLVLVLGDTNETLAAALAAFKLGIPVAHVEAGLRSFD-----RGMPDEENRHAID--KLSDL 144 (363)
T ss_pred HHHHHHHHHHHHh-CC--CEEEEeCCchHHHHHHHHHHHcCCCEEEEecccccCC-----CCCCchHHHHHHH--HHhhh
Confidence 3344455555554 66 89999988776676666555557888765441 110 011211 11111 13565
Q ss_pred EeecCHHhHHHHHHHHHHHhCCeecccCceeeEEEcCEEEEEEEeeccc-ChHHHHHhhCCcchHHHHHHHHHHhc-cCC
Q 044635 261 IGFHTFDYARHFLSCCSRMLGLTYESKRGYIGLEYYGRTVSIKILPVGI-HMGQLQSVLSLPGTEAKVSELIKQFH-DQG 338 (831)
Q Consensus 261 igf~t~~~~~~Fl~~~~r~l~~~~~~~~~~~~~~~~gr~~~i~v~P~GI-d~~~~~~~~~~~~~~~~~~~lr~~~~-~~~ 338 (831)
+-.-+....+++.. .| ....+|.++++++ |...+..... + ....++.++ +.+
T Consensus 145 ~~~~s~~~~~~l~~-----~G---------------~~~~kI~vign~v~d~~~~~~~~~-~-----~~~~~~~~~~~~~ 198 (363)
T cd03786 145 HFAPTEEARRNLLQ-----EG---------------EPPERIFVVGNTMIDALLRLLELA-K-----KELILELLGLLPK 198 (363)
T ss_pred ccCCCHHHHHHHHH-----cC---------------CCcccEEEECchHHHHHHHHHHhh-c-----cchhhhhcccCCC
Confidence 55445444433332 11 1233566777764 5433321111 0 011233444 345
Q ss_pred cEEEEeccCccc---ccCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhccCCCCCCc
Q 044635 339 KVMLLGVDDMDI---FKGISLKLLAMEQLLIQHPEWQGKVVLVQIANPARGRGKDVKEVQAETYSTVERINQTFGKPGYD 415 (831)
Q Consensus 339 ~~iil~VdRld~---~KGi~~~l~A~~~lL~~~P~~~~~vvLvqig~p~r~~~~~~~~l~~~i~~lv~~IN~~~g~~~~~ 415 (831)
+.+++.++|+.. .||+..+++|+.++.+. + +.++..+. ++....+++ .+.+.+. . -.
T Consensus 199 ~~vlv~~~r~~~~~~~k~~~~l~~al~~l~~~--~----~~vi~~~~-----~~~~~~l~~----~~~~~~~-~----~~ 258 (363)
T cd03786 199 KYILVTLHRVENVDDGEQLEEILEALAELAEE--D----VPVVFPNH-----PRTRPRIRE----AGLEFLG-H----HP 258 (363)
T ss_pred CEEEEEeCCccccCChHHHHHHHHHHHHHHhc--C----CEEEEECC-----CChHHHHHH----HHHhhcc-C----CC
Confidence 668889999875 79999999999987442 2 33554442 222233333 3333221 0 11
Q ss_pred cEEEecCCCCHHHHHHHHHHcCEeEECCCccCCCCCCCC-CceEEEeccccccccc-CCCceeCC-CCHHHHHHHHHHHh
Q 044635 416 PVVLIDEPLKFYERIAYYVVAECCLVTAVRDGSEPSSPK-KSMLVVSEFIGCSPSL-SGAIRVNP-WNIDAVSDAMDSAL 492 (831)
Q Consensus 416 pv~~~~~~v~~~el~aly~~ADv~vvtS~~eGma~~~~~-~g~lVlSe~~G~~~~l-~~allVnP-~d~~~~A~ai~~aL 492 (831)
.|. +.+....+++..+|+.||++|.+|- |+..++.. +.|+|++...+..+++ .+|..+.+ .|+++++++|.++|
T Consensus 259 ~v~-~~~~~~~~~~~~l~~~ad~~v~~Sg--gi~~Ea~~~g~PvI~~~~~~~~~~~~~~g~~~~~~~~~~~i~~~i~~ll 335 (363)
T cd03786 259 NVL-LISPLGYLYFLLLLKNADLVLTDSG--GIQEEASFLGVPVLNLRDRTERPETVESGTNVLVGTDPEAILAAIEKLL 335 (363)
T ss_pred CEE-EECCcCHHHHHHHHHcCcEEEEcCc--cHHhhhhhcCCCEEeeCCCCccchhhheeeEEecCCCHHHHHHHHHHHh
Confidence 344 4446678899999999999999986 66333333 4577777665655555 45544443 37999999999999
Q ss_pred cCCH
Q 044635 493 EMAD 496 (831)
Q Consensus 493 ~m~~ 496 (831)
+.+.
T Consensus 336 ~~~~ 339 (363)
T cd03786 336 SDEF 339 (363)
T ss_pred cCch
Confidence 8653
No 119
>TIGR00236 wecB UDP-N-acetylglucosamine 2-epimerase. Epimerase activity was also demonstrated in a bifunctional rat enzyme, for which the N-terminal domain appears to be orthologous. The set of proteins found above the suggested cutoff includes E. coli WecB in one of two deeply branched clusters and the rat UDP-N-acetylglucosamine 2-epimerase domain in the other.
Probab=98.92 E-value=9.1e-08 Score=107.35 Aligned_cols=251 Identities=17% Similarity=0.167 Sum_probs=139.9
Q ss_pred HHHHHHHHHHcCCCCCEEEEeCccccchHHHHHhhcCCCeEEEEEeccCCChHHhhcCCChHHHHHHHh--cCCeEeecC
Q 044635 188 KIFADRIMEVINPEDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYKTLPIREEILRALL--NSDLIGFHT 265 (831)
Q Consensus 188 ~~fa~~i~~~~~~~~d~vwvhDyhL~llp~~lr~~~~~~~i~~flH~PfP~~e~f~~lp~r~eil~~ll--~~dligf~t 265 (831)
..|++.+ +..+| |+|.+|......+...+-.+..++|++..-+- .-+.+.+. |+.+++.+-+. .||++--.+
T Consensus 76 ~~l~~~l-~~~~p--Div~~~gd~~~~la~a~aa~~~~ipv~h~~~g-~~s~~~~~--~~~~~~~r~~~~~~ad~~~~~s 149 (365)
T TIGR00236 76 EGLEELL-LEEKP--DIVLVQGDTTTTLAGALAAFYLQIPVGHVEAG-LRTGDRYS--PMPEEINRQLTGHIADLHFAPT 149 (365)
T ss_pred HHHHHHH-HHcCC--CEEEEeCCchHHHHHHHHHHHhCCCEEEEeCC-CCcCCCCC--CCccHHHHHHHHHHHHhccCCC
Confidence 4455444 44466 89999955444444444334446777643221 11111111 22233323222 267776677
Q ss_pred HHhHHHHHHHHHHHhCCeecccCceeeEEEcCEEEEEEEeecccChHHHHHhhCCcchHHHHHHHHHHhccCCcEEEEec
Q 044635 266 FDYARHFLSCCSRMLGLTYESKRGYIGLEYYGRTVSIKILPVGIHMGQLQSVLSLPGTEAKVSELIKQFHDQGKVMLLGV 345 (831)
Q Consensus 266 ~~~~~~Fl~~~~r~l~~~~~~~~~~~~~~~~gr~~~i~v~P~GId~~~~~~~~~~~~~~~~~~~lr~~~~~~~~~iil~V 345 (831)
....+++++ +|. ...+|.++++|+....+..... .....++++++..+..+++..
T Consensus 150 ~~~~~~l~~-----~G~---------------~~~~I~vign~~~d~~~~~~~~-----~~~~~~~~~~~~~~~~vl~~~ 204 (365)
T TIGR00236 150 EQAKDNLLR-----ENV---------------KADSIFVTGNTVIDALLTNVEI-----AYSSPVLSEFGEDKRYILLTL 204 (365)
T ss_pred HHHHHHHHH-----cCC---------------CcccEEEeCChHHHHHHHHHhh-----ccchhHHHhcCCCCCEEEEec
Confidence 766666653 122 2346778888863322221111 012345566642223455555
Q ss_pred cCcc-cccCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhccCCCCCCccEEEecCCC
Q 044635 346 DDMD-IFKGISLKLLAMEQLLIQHPEWQGKVVLVQIANPARGRGKDVKEVQAETYSTVERINQTFGKPGYDPVVLIDEPL 424 (831)
Q Consensus 346 dRld-~~KGi~~~l~A~~~lL~~~P~~~~~vvLvqig~p~r~~~~~~~~l~~~i~~lv~~IN~~~g~~~~~pv~~~~~~v 424 (831)
.|.. ..||+..+++|+.++.+++|+++ ++.++.|. ++ .+.+ +.+..+ . ...|.+ .+++
T Consensus 205 hr~~~~~k~~~~ll~a~~~l~~~~~~~~----~vi~~~~~----~~---~~~~---~~~~~~----~--~~~v~~-~~~~ 263 (365)
T TIGR00236 205 HRRENVGEPLENIFKAIREIVEEFEDVQ----IVYPVHLN----PV---VREP---LHKHLG----D--SKRVHL-IEPL 263 (365)
T ss_pred CchhhhhhHHHHHHHHHHHHHHHCCCCE----EEEECCCC----hH---HHHH---HHHHhC----C--CCCEEE-ECCC
Confidence 5653 45999999999999998888765 66655332 11 1222 222221 1 113544 4578
Q ss_pred CHHHHHHHHHHcCEeEECC---CccCCCCCCCCCceEEEeccccccccc---CCCceeCCCCHHHHHHHHHHHhcCC
Q 044635 425 KFYERIAYYVVAECCLVTA---VRDGSEPSSPKKSMLVVSEFIGCSPSL---SGAIRVNPWNIDAVSDAMDSALEMA 495 (831)
Q Consensus 425 ~~~el~aly~~ADv~vvtS---~~eGma~~~~~~g~lVlSe~~G~~~~l---~~allVnP~d~~~~A~ai~~aL~m~ 495 (831)
+..++..+|+.||+++.+| ..|.|++ +.|+|.+...|..+++ ..++++ |.|+++++++|.++|+.+
T Consensus 264 ~~~~~~~~l~~ad~vv~~Sg~~~~EA~a~----g~PvI~~~~~~~~~e~~~~g~~~lv-~~d~~~i~~ai~~ll~~~ 335 (365)
T TIGR00236 264 EYLDFLNLAANSHLILTDSGGVQEEAPSL----GKPVLVLRDTTERPETVEAGTNKLV-GTDKENITKAAKRLLTDP 335 (365)
T ss_pred ChHHHHHHHHhCCEEEECChhHHHHHHHc----CCCEEECCCCCCChHHHhcCceEEe-CCCHHHHHHHHHHHHhCh
Confidence 8999999999999999887 1233444 4566665444434333 234566 579999999999999744
No 120
>PRK13609 diacylglycerol glucosyltransferase; Provisional
Probab=98.92 E-value=2.1e-07 Score=105.00 Aligned_cols=273 Identities=10% Similarity=0.099 Sum_probs=152.9
Q ss_pred HHHHHHHHHHHHHHHcCCCCCEEEEeCccccchHHHHHhhcCCCeEEEEEeccCCChHHhhcCCChHHHHHHHhcCCeEe
Q 044635 183 YVSVNKIFADRIMEVINPEDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYKTLPIREEILRALLNSDLIG 262 (831)
Q Consensus 183 Y~~vN~~fa~~i~~~~~~~~d~vwvhDyhL~llp~~lr~~~~~~~i~~flH~PfP~~e~f~~lp~r~eil~~ll~~dlig 262 (831)
+...+..-..++.+..+| |+|..| +....++.+.+....++|+.... +-|-. + ...+.+ .+|.+-
T Consensus 88 ~~~~~~~~l~~~l~~~~p--D~Vi~~-~~~~~~~~~~~~~~~~ip~~~~~-td~~~-------~-~~~~~~---~ad~i~ 152 (380)
T PRK13609 88 YANFGRKRLKLLLQAEKP--DIVINT-FPIIAVPELKKQTGISIPTYNVL-TDFCL-------H-KIWVHR---EVDRYF 152 (380)
T ss_pred HHHHHHHHHHHHHHHhCc--CEEEEc-ChHHHHHHHHHhcCCCCCeEEEe-CCCCC-------C-cccccC---CCCEEE
Confidence 333444445556666677 788874 66777887766666667765322 21210 0 111111 589888
Q ss_pred ecCHHhHHHHHHHHHHHhCCeecccCceeeEEEcCEEEEEEEeecccChHHHHHhhCCcchHHHHHHHHHHhc-cCCc-E
Q 044635 263 FHTFDYARHFLSCCSRMLGLTYESKRGYIGLEYYGRTVSIKILPVGIHMGQLQSVLSLPGTEAKVSELIKQFH-DQGK-V 340 (831)
Q Consensus 263 f~t~~~~~~Fl~~~~r~l~~~~~~~~~~~~~~~~gr~~~i~v~P~GId~~~~~~~~~~~~~~~~~~~lr~~~~-~~~~-~ 340 (831)
..+....+.+.+ .|.. ..++.++++.++. .|... .. ...++++++ .+++ .
T Consensus 153 ~~s~~~~~~l~~-----~gi~---------------~~ki~v~G~p~~~-~f~~~---~~----~~~~~~~~~l~~~~~~ 204 (380)
T PRK13609 153 VATDHVKKVLVD-----IGVP---------------PEQVVETGIPIRS-SFELK---IN----PDIIYNKYQLCPNKKI 204 (380)
T ss_pred ECCHHHHHHHHH-----cCCC---------------hhHEEEECcccCh-HHcCc---CC----HHHHHHHcCCCCCCcE
Confidence 777654444432 1221 1123333222322 23211 11 124567776 4444 4
Q ss_pred EEEeccCcccccCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhccCCCCCCccEEEe
Q 044635 341 MLLGVDDMDIFKGISLKLLAMEQLLIQHPEWQGKVVLVQIANPARGRGKDVKEVQAETYSTVERINQTFGKPGYDPVVLI 420 (831)
Q Consensus 341 iil~VdRld~~KGi~~~l~A~~~lL~~~P~~~~~vvLvqig~p~r~~~~~~~~l~~~i~~lv~~IN~~~g~~~~~pv~~~ 420 (831)
+++..|++...||+..+++++.+ .|+++ +++++.. ++ .+++++++++++. + ..|+++
T Consensus 205 il~~~G~~~~~k~~~~li~~l~~----~~~~~----~viv~G~---~~----~~~~~l~~~~~~~----~----~~v~~~ 261 (380)
T PRK13609 205 LLIMAGAHGVLGNVKELCQSLMS----VPDLQ----VVVVCGK---NE----ALKQSLEDLQETN----P----DALKVF 261 (380)
T ss_pred EEEEcCCCCCCcCHHHHHHHHhh----CCCcE----EEEEeCC---CH----HHHHHHHHHHhcC----C----CcEEEE
Confidence 66677999999999998888642 35554 7766521 11 2344455544332 1 136554
Q ss_pred cCCCCHHHHHHHHHHcCEeEECC----CccCCCCCCCCCceEEEecccccc-----ccc-CCCceeCCCCHHHHHHHHHH
Q 044635 421 DEPLKFYERIAYYVVAECCLVTA----VRDGSEPSSPKKSMLVVSEFIGCS-----PSL-SGAIRVNPWNIDAVSDAMDS 490 (831)
Q Consensus 421 ~~~v~~~el~aly~~ADv~vvtS----~~eGma~~~~~~g~lVlSe~~G~~-----~~l-~~allVnP~d~~~~A~ai~~ 490 (831)
+.+ +++..+|+.||+++..+ +.|.|++ +.|+|++...+.. ..+ ..|..+.+.|+++++++|.+
T Consensus 262 -g~~--~~~~~l~~~aD~~v~~~gg~t~~EA~a~----g~PvI~~~~~~g~~~~n~~~~~~~G~~~~~~~~~~l~~~i~~ 334 (380)
T PRK13609 262 -GYV--ENIDELFRVTSCMITKPGGITLSEAAAL----GVPVILYKPVPGQEKENAMYFERKGAAVVIRDDEEVFAKTEA 334 (380)
T ss_pred -ech--hhHHHHHHhccEEEeCCCchHHHHHHHh----CCCEEECCCCCCcchHHHHHHHhCCcEEEECCHHHHHHHHHH
Confidence 555 46889999999988533 1233344 4566666533321 122 34555667899999999999
Q ss_pred HhcCCHHHHHHHHHHHhhhhccCCHHHHHHHHHHHHHHH
Q 044635 491 ALEMADQEKQLRHEKHYRYVSTHDVGYWARSFLQDLERT 529 (831)
Q Consensus 491 aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l~~~ 529 (831)
+++.+ +.+....+..++....++....++.+++.+...
T Consensus 335 ll~~~-~~~~~m~~~~~~~~~~~s~~~i~~~i~~~~~~~ 372 (380)
T PRK13609 335 LLQDD-MKLLQMKEAMKSLYLPEPADHIVDDILAENHVE 372 (380)
T ss_pred HHCCH-HHHHHHHHHHHHhCCCchHHHHHHHHHHhhhhh
Confidence 99854 344444445566667788888888777665543
No 121
>PRK00726 murG undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase; Provisional
Probab=98.91 E-value=5.5e-08 Score=108.64 Aligned_cols=252 Identities=14% Similarity=0.056 Sum_probs=147.8
Q ss_pred HHHHHcCCCCCEEEEeCccccchHHHHHhhcCCCeEEEEEeccCCChHHhhcCCChHHHHHHHhcCCeEeecCHHhHHHH
Q 044635 193 RIMEVINPEDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYKTLPIREEILRALLNSDLIGFHTFDYARHF 272 (831)
Q Consensus 193 ~i~~~~~~~~d~vwvhDyhL~llp~~lr~~~~~~~i~~flH~PfP~~e~f~~lp~r~eil~~ll~~dligf~t~~~~~~F 272 (831)
++.+..+| |+|..|.....+. ..+..+....|+.++.|..+|.. .+.++- -.+|.+-..+++- +
T Consensus 85 ~~ik~~~p--Dvv~~~~~~~~~~-~~~~~~~~~~p~v~~~~~~~~~~--------~~r~~~--~~~d~ii~~~~~~---~ 148 (357)
T PRK00726 85 KILKRFKP--DVVVGFGGYVSGP-GGLAARLLGIPLVIHEQNAVPGL--------ANKLLA--RFAKKVATAFPGA---F 148 (357)
T ss_pred HHHHhcCC--CEEEECCCcchhH-HHHHHHHcCCCEEEEcCCCCccH--------HHHHHH--HHhchheECchhh---h
Confidence 34455555 8999998554443 43445566788887766544421 011111 1244443333210 0
Q ss_pred HHHHHHHhCCeecccCceeeEEEcCEEEEEEEeecccChHHHHHhhCCcchHHHHHHHHHHhc-cCCcEEEEeccCcccc
Q 044635 273 LSCCSRMLGLTYESKRGYIGLEYYGRTVSIKILPVGIHMGQLQSVLSLPGTEAKVSELIKQFH-DQGKVMLLGVDDMDIF 351 (831)
Q Consensus 273 l~~~~r~l~~~~~~~~~~~~~~~~gr~~~i~v~P~GId~~~~~~~~~~~~~~~~~~~lr~~~~-~~~~~iil~VdRld~~ 351 (831)
.+ ....++.++|+|+|.+.+.. +. .+++++ +.+.++|+.+|+....
T Consensus 149 --------------------~~--~~~~~i~vi~n~v~~~~~~~----~~-------~~~~~~~~~~~~~i~~~gg~~~~ 195 (357)
T PRK00726 149 --------------------PE--FFKPKAVVTGNPVREEILAL----AA-------PPARLAGREGKPTLLVVGGSQGA 195 (357)
T ss_pred --------------------hc--cCCCCEEEECCCCChHhhcc----cc-------hhhhccCCCCCeEEEEECCcHhH
Confidence 00 12246888999999876532 11 112333 3567889999999999
Q ss_pred cCHHHHH-HHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhccCCCCCCccEEEecCCCCHHHHH
Q 044635 352 KGISLKL-LAMEQLLIQHPEWQGKVVLVQIANPARGRGKDVKEVQAETYSTVERINQTFGKPGYDPVVLIDEPLKFYERI 430 (831)
Q Consensus 352 KGi~~~l-~A~~~lL~~~P~~~~~vvLvqig~p~r~~~~~~~~l~~~i~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~ 430 (831)
|++..++ +|+.++.+. | .+++++|. ++ .+++.+.+. . +.. |. +.+.+ +++.
T Consensus 196 ~~~~~~l~~a~~~~~~~-~-----~~~~~~G~-----g~-~~~~~~~~~---------~---~~~-v~-~~g~~--~~~~ 247 (357)
T PRK00726 196 RVLNEAVPEALALLPEA-L-----QVIHQTGK-----GD-LEEVRAAYA---------A---GIN-AE-VVPFI--DDMA 247 (357)
T ss_pred HHHHHHHHHHHHHhhhC-c-----EEEEEcCC-----Cc-HHHHHHHhh---------c---CCc-EE-EeehH--hhHH
Confidence 9987776 888877432 2 34666663 22 123322221 1 222 44 34444 6899
Q ss_pred HHHHHcCEeEECCC----ccCCCCCCCCCceEEEecccc--------ccccc---CCCceeCCCC--HHHHHHHHHHHhc
Q 044635 431 AYYVVAECCLVTAV----RDGSEPSSPKKSMLVVSEFIG--------CSPSL---SGAIRVNPWN--IDAVSDAMDSALE 493 (831)
Q Consensus 431 aly~~ADv~vvtS~----~eGma~~~~~~g~lVlSe~~G--------~~~~l---~~allVnP~d--~~~~A~ai~~aL~ 493 (831)
.+|+.||+++.+|- .|.|++ +.|+|++...| .++.+ ..|++++|.| +++++++|.+++.
T Consensus 248 ~~~~~~d~~i~~~g~~~~~Ea~~~----g~Pvv~~~~~~~~~~~~~~~~~~i~~~~~g~~~~~~~~~~~~l~~~i~~ll~ 323 (357)
T PRK00726 248 AAYAAADLVICRAGASTVAELAAA----GLPAILVPLPHAADDHQTANARALVDAGAALLIPQSDLTPEKLAEKLLELLS 323 (357)
T ss_pred HHHHhCCEEEECCCHHHHHHHHHh----CCCEEEecCCCCCcCcHHHHHHHHHHCCCEEEEEcccCCHHHHHHHHHHHHc
Confidence 99999999998873 122344 44666654322 12233 4578888888 9999999999998
Q ss_pred CCHHHHHHHHHHHhhhhccCCHHHHHHHHHHHH
Q 044635 494 MADQEKQLRHEKHYRYVSTHDVGYWARSFLQDL 526 (831)
Q Consensus 494 m~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l 526 (831)
. ++.++...+..+++..+.+...-++.+++.+
T Consensus 324 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 355 (357)
T PRK00726 324 D-PERLEAMAEAARALGKPDAAERLADLIEELA 355 (357)
T ss_pred C-HHHHHHHHHHHHhcCCcCHHHHHHHHHHHHh
Confidence 6 4455555555677777777777666665543
No 122
>TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family. The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved.
Probab=98.89 E-value=7.2e-09 Score=101.65 Aligned_cols=70 Identities=21% Similarity=0.236 Sum_probs=56.2
Q ss_pred CHHHHHHHHHHHhhhcCCCcccEEEEcCCchhHHHHHHcchhcCCCCCCCCCceEEEEeCCC----CcccceEeCCh--h
Q 044635 739 NKGLVAKRLLSTMQEREMLPDFVLCVGDDRSDEDMFEVIISSMAGPSIAPRAEVFACTVGRK----PSKAKYYLDDT--V 812 (831)
Q Consensus 739 nKG~al~~Ll~~l~~~g~~~d~vla~GD~~NDe~Mf~~a~~~~~~~~~~~~~~~~~v~vG~~----~s~A~y~l~d~--~ 812 (831)
+|..+++.+++++ |++++.++++||+.||++|++.++.+ +.|.+. +..|+|++.++ +
T Consensus 76 ~k~~~~~~~~~~~---~~~~~~~~~vGDs~~D~~~~~~ag~~--------------~~v~~~~~~~~~~a~~i~~~~~~~ 138 (154)
T TIGR01670 76 NKLIAFSDILEKL---ALAPENVAYIGDDLIDWPVMEKVGLS--------------VAVADAHPLLIPRADYVTRIAGGR 138 (154)
T ss_pred chHHHHHHHHHHc---CCCHHHEEEECCCHHHHHHHHHCCCe--------------EecCCcCHHHHHhCCEEecCCCCC
Confidence 4889999999988 89999999999999999999999853 444432 46788888644 3
Q ss_pred H-HHHHHHHHHhhh
Q 044635 813 E-IVRLMQGLACVA 825 (831)
Q Consensus 813 e-V~~~L~~L~~~~ 825 (831)
+ +.++++.+....
T Consensus 139 g~~~~~~~~~~~~~ 152 (154)
T TIGR01670 139 GAVREVCELLLLAQ 152 (154)
T ss_pred cHHHHHHHHHHHhh
Confidence 3 899999887754
No 123
>PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional
Probab=98.88 E-value=6.9e-09 Score=104.83 Aligned_cols=124 Identities=18% Similarity=0.250 Sum_probs=87.6
Q ss_pred cCceeEEecCCCccCCCC----CCCCCCCHHHH---HHHHHHhhcCCCeEEEECCCCHhhHHHHhCCCCCceEEecCCEE
Q 044635 571 TTTRAILLDYDGTLMPQA----SIDKSPNSKTI---DILNSLCRDKNNMVFLVSAKSRKTLAEWFSPCENLGIAAEHGYF 643 (831)
Q Consensus 571 s~~rli~~D~DGTLl~~~----~~~~~~s~~~~---~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~~~~~~liaenGa~ 643 (831)
..+|+|++|+||||++.. ........... ..++.|.+ .|..++|+|||+...+..+++.+.-..+
T Consensus 19 ~~ikli~~D~Dgtl~~~~i~~~~~~~~~~~~~~~d~~~i~~L~~-~Gi~v~I~T~~~~~~v~~~l~~lgl~~~------- 90 (183)
T PRK09484 19 ENIRLLICDVDGVFSDGLIYMGNNGEELKAFNVRDGYGIRCLLT-SGIEVAIITGRKSKLVEDRMTTLGITHL------- 90 (183)
T ss_pred hCceEEEEcCCeeeecCEEEEcCCCCEEEEEeccchHHHHHHHH-CCCEEEEEeCCCcHHHHHHHHHcCCcee-------
Confidence 469999999999999731 01222333322 67777865 6999999999999888877764310000
Q ss_pred EEeCCCceEEEcCCcCCccHHHHHHHHHHHHhccCCCeeEeeccceEEEeeccCCCccchHHHHHHHHHHHhHhcCCCeE
Q 044635 644 FRLRRDEEWETCIPVADCGWKQIAEPVMKLYTETTDGSTIEDKETALVWSYEDADPDFGSCQAKELLDHLESVLANEPVT 723 (831)
Q Consensus 644 i~~~~~~~w~~~~~~~~~~w~~~v~~il~~~~e~~~gs~ie~k~~~l~~~~~~~d~~~~~~~a~el~~~L~~~l~~~~v~ 723 (831)
+ .|
T Consensus 91 --------f--------------------------~g------------------------------------------- 93 (183)
T PRK09484 91 --------Y--------------------------QG------------------------------------------- 93 (183)
T ss_pred --------e--------------------------cC-------------------------------------------
Confidence 0 00
Q ss_pred EEEcCeEEEEEeCCCCHHHHHHHHHHHhhhcCCCcccEEEEcCCchhHHHHHHcchhcCCCCCCCCCceEEEEeCCC---
Q 044635 724 VKSGQNLVEVKPQGVNKGLVAKRLLSTMQEREMLPDFVLCVGDDRSDEDMFEVIISSMAGPSIAPRAEVFACTVGRK--- 800 (831)
Q Consensus 724 v~~g~~~vEV~p~gvnKG~al~~Ll~~l~~~g~~~d~vla~GD~~NDe~Mf~~a~~~~~~~~~~~~~~~~~v~vG~~--- 800 (831)
.-+|..+++.+++.+ |++++++++|||+.||++|++.++. ++.|++.
T Consensus 94 -------------~~~k~~~l~~~~~~~---gl~~~ev~~VGDs~~D~~~a~~aG~--------------~~~v~~~~~~ 143 (183)
T PRK09484 94 -------------QSNKLIAFSDLLEKL---AIAPEQVAYIGDDLIDWPVMEKVGL--------------SVAVADAHPL 143 (183)
T ss_pred -------------CCcHHHHHHHHHHHh---CCCHHHEEEECCCHHHHHHHHHCCC--------------eEecCChhHH
Confidence 012567889999988 9999999999999999999999984 3445654
Q ss_pred -CcccceEeC
Q 044635 801 -PSKAKYYLD 809 (831)
Q Consensus 801 -~s~A~y~l~ 809 (831)
...|+|++.
T Consensus 144 ~~~~a~~v~~ 153 (183)
T PRK09484 144 LLPRADYVTR 153 (183)
T ss_pred HHHhCCEEec
Confidence 346788885
No 124
>cd03785 GT1_MurG MurG is an N-acetylglucosaminyltransferase, the last enzyme involved in the intracellular phase of peptidoglycan biosynthesis. It transfers N-acetyl-D-glucosamine (GlcNAc) from UDP-GlcNAc to the C4 hydroxyl of a lipid-linked N-acetylmuramoyl pentapeptide (NAM). The resulting disaccharide is then transported across the cell membrane, where it is polymerized into NAG-NAM cell-wall repeat structure. MurG belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains, each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=98.86 E-value=2e-07 Score=103.61 Aligned_cols=242 Identities=15% Similarity=0.118 Sum_probs=139.7
Q ss_pred HHHHHcCCCCCEEEEeCccccchHHHHHhhcCCCeEEEEEeccCCChHHhhcCCChHHHHHHHhcCCeEeecCHHhHHHH
Q 044635 193 RIMEVINPEDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYKTLPIREEILRALLNSDLIGFHTFDYARHF 272 (831)
Q Consensus 193 ~i~~~~~~~~d~vwvhDyhL~llp~~lr~~~~~~~i~~flH~PfP~~e~f~~lp~r~eil~~ll~~dligf~t~~~~~~F 272 (831)
++++..+| |+|+.|.... .++..+..+..++|+.++-|..||.. . +.++ ...+|.|...++...+.
T Consensus 83 ~~i~~~~p--DvI~~~~~~~-~~~~~~~a~~~~~p~v~~~~~~~~~~--~------~~~~--~~~~~~vi~~s~~~~~~- 148 (350)
T cd03785 83 KILKKFKP--DVVVGFGGYV-SGPVGLAAKLLGIPLVIHEQNAVPGL--A------NRLL--ARFADRVALSFPETAKY- 148 (350)
T ss_pred HHHHhcCC--CEEEECCCCc-chHHHHHHHHhCCCEEEEcCCCCccH--H------HHHH--HHhhCEEEEcchhhhhc-
Confidence 44555565 8999886544 34444555555778776655555421 0 1111 11256666554422211
Q ss_pred HHHHHHHhCCeecccCceeeEEEcCEEEEEEEeecccChHHHHHhhCCcchHHHHHHHHHHhc-cCCcEEEEeccCcccc
Q 044635 273 LSCCSRMLGLTYESKRGYIGLEYYGRTVSIKILPVGIHMGQLQSVLSLPGTEAKVSELIKQFH-DQGKVMLLGVDDMDIF 351 (831)
Q Consensus 273 l~~~~r~l~~~~~~~~~~~~~~~~gr~~~i~v~P~GId~~~~~~~~~~~~~~~~~~~lr~~~~-~~~~~iil~VdRld~~ 351 (831)
+ ...++.++|+|+|.+.+... . . +++++ +.++++|+.+++....
T Consensus 149 ----------------------~--~~~~~~~i~n~v~~~~~~~~-------~---~-~~~~~~~~~~~~i~~~~g~~~~ 193 (350)
T cd03785 149 ----------------------F--PKDKAVVTGNPVREEILALD-------R---E-RARLGLRPGKPTLLVFGGSQGA 193 (350)
T ss_pred ----------------------C--CCCcEEEECCCCchHHhhhh-------h---h-HHhcCCCCCCeEEEEECCcHhH
Confidence 0 12356778999998766421 1 1 45555 5678888889888788
Q ss_pred cCHHHHH-HHHHHHHHhCCCCCCcEEEE-EEecCCCCCchhHHHHHHHHHHHHHHHhccCCCCCCccEEEecCCCCHHHH
Q 044635 352 KGISLKL-LAMEQLLIQHPEWQGKVVLV-QIANPARGRGKDVKEVQAETYSTVERINQTFGKPGYDPVVLIDEPLKFYER 429 (831)
Q Consensus 352 KGi~~~l-~A~~~lL~~~P~~~~~vvLv-qig~p~r~~~~~~~~l~~~i~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el 429 (831)
|+...++ +|+..+. + ++ +.++ ++| .+ +.+++++.+.++ +. .|++ .+.+ +++
T Consensus 194 ~~~~~~l~~a~~~l~-~-~~----~~~~~i~G-----~g-~~~~l~~~~~~~--------~~----~v~~-~g~~--~~~ 246 (350)
T cd03785 194 RAINEAVPEALAELL-R-KR----LQVIHQTG-----KG-DLEEVKKAYEEL--------GV----NYEV-FPFI--DDM 246 (350)
T ss_pred HHHHHHHHHHHHHhh-c-cC----eEEEEEcC-----Cc-cHHHHHHHHhcc--------CC----CeEE-eehh--hhH
Confidence 8877654 7777663 2 22 3333 444 22 233444433221 11 2444 4443 799
Q ss_pred HHHHHHcCEeEECCC----ccCCCCCCCCCceEEEecccc--------ccccc---CCCceeCCC--CHHHHHHHHHHHh
Q 044635 430 IAYYVVAECCLVTAV----RDGSEPSSPKKSMLVVSEFIG--------CSPSL---SGAIRVNPW--NIDAVSDAMDSAL 492 (831)
Q Consensus 430 ~aly~~ADv~vvtS~----~eGma~~~~~~g~lVlSe~~G--------~~~~l---~~allVnP~--d~~~~A~ai~~aL 492 (831)
..+|+.||++|.+|- .|-|++ +.|+|++...| .++.+ ..|++++|. |+++++++|.+++
T Consensus 247 ~~~l~~ad~~v~~sg~~t~~Eam~~----G~Pvv~~~~~~~~~~~~~~~~~~l~~~g~g~~v~~~~~~~~~l~~~i~~ll 322 (350)
T cd03785 247 AAAYAAADLVISRAGASTVAELAAL----GLPAILIPLPYAADDHQTANARALVKAGAAVLIPQEELTPERLAAALLELL 322 (350)
T ss_pred HHHHHhcCEEEECCCHhHHHHHHHh----CCCEEEeecCCCCCCcHHHhHHHHHhCCCEEEEecCCCCHHHHHHHHHHHh
Confidence 999999999998762 122333 44666654432 12333 457889987 8999999999999
Q ss_pred cCCHHHHHHHHHHHhhhhccCCH
Q 044635 493 EMADQEKQLRHEKHYRYVSTHDV 515 (831)
Q Consensus 493 ~m~~~er~~r~~~~~~~v~~~~~ 515 (831)
. +++.++...++.++++..+..
T Consensus 323 ~-~~~~~~~~~~~~~~~~~~~~~ 344 (350)
T cd03785 323 S-DPERLKAMAEAARSLARPDAA 344 (350)
T ss_pred c-CHHHHHHHHHHHHhcCCCCHH
Confidence 6 444555445556666665543
No 125
>PRK13608 diacylglycerol glucosyltransferase; Provisional
Probab=98.82 E-value=4.8e-07 Score=102.60 Aligned_cols=173 Identities=10% Similarity=0.067 Sum_probs=106.6
Q ss_pred HHHHHhc-cCCc-EEEEeccCcccccCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHh
Q 044635 329 ELIKQFH-DQGK-VMLLGVDDMDIFKGISLKLLAMEQLLIQHPEWQGKVVLVQIANPARGRGKDVKEVQAETYSTVERIN 406 (831)
Q Consensus 329 ~lr~~~~-~~~~-~iil~VdRld~~KGi~~~l~A~~~lL~~~P~~~~~vvLvqig~p~r~~~~~~~~l~~~i~~lv~~IN 406 (831)
.++++++ ++++ .++++.||+...||+..+++++ ++..|+++ ++.++. .++ ++.+++.+. .+
T Consensus 191 ~~~~~~~l~~~~~~ilv~~G~lg~~k~~~~li~~~---~~~~~~~~----~vvv~G----~~~---~l~~~l~~~---~~ 253 (391)
T PRK13608 191 QWLIDNNLDPDKQTILMSAGAFGVSKGFDTMITDI---LAKSANAQ----VVMICG----KSK---ELKRSLTAK---FK 253 (391)
T ss_pred HHHHHcCCCCCCCEEEEECCCcccchhHHHHHHHH---HhcCCCce----EEEEcC----CCH---HHHHHHHHH---hc
Confidence 4556666 3444 5667899999999999999885 34456554 665652 222 222333322 11
Q ss_pred ccCCCCCCccEEEecCCCCHHHHHHHHHHcCEeEECC----CccCCCCCCCCCceEEEeccccccccc------CCCcee
Q 044635 407 QTFGKPGYDPVVLIDEPLKFYERIAYYVVAECCLVTA----VRDGSEPSSPKKSMLVVSEFIGCSPSL------SGAIRV 476 (831)
Q Consensus 407 ~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv~vvtS----~~eGma~~~~~~g~lVlSe~~G~~~~l------~~allV 476 (831)
. . ..|+ +.|.+ +++..+|+.||++|..| +.|.|++ +.|+|++...+..+.- ..|.-+
T Consensus 254 ~----~--~~v~-~~G~~--~~~~~~~~~aDl~I~k~gg~tl~EA~a~----G~PvI~~~~~pgqe~~N~~~~~~~G~g~ 320 (391)
T PRK13608 254 S----N--ENVL-ILGYT--KHMNEWMASSQLMITKPGGITISEGLAR----CIPMIFLNPAPGQELENALYFEEKGFGK 320 (391)
T ss_pred c----C--CCeE-EEecc--chHHHHHHhhhEEEeCCchHHHHHHHHh----CCCEEECCCCCCcchhHHHHHHhCCcEE
Confidence 1 1 1344 44554 57999999999999755 2244444 5577776543322211 222333
Q ss_pred CCCCHHHHHHHHHHHhcCCHHHHHHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHH
Q 044635 477 NPWNIDAVSDAMDSALEMADQEKQLRHEKHYRYVSTHDVGYWARSFLQDLERTCRE 532 (831)
Q Consensus 477 nP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l~~~~~~ 532 (831)
-+.|.++++++|.++++.+ +++....++.++....++....++.+++-+...++-
T Consensus 321 ~~~~~~~l~~~i~~ll~~~-~~~~~m~~~~~~~~~~~s~~~i~~~l~~l~~~~~~~ 375 (391)
T PRK13608 321 IADTPEEAIKIVASLTNGN-EQLTNMISTMEQDKIKYATQTICRDLLDLIGHSSQP 375 (391)
T ss_pred EeCCHHHHHHHHHHHhcCH-HHHHHHHHHHHHhcCCCCHHHHHHHHHHHhhhhhhh
Confidence 3669999999999999754 445555556677777788888888777766655443
No 126
>TIGR01133 murG undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase. RL J Bacteriol 1993 Mar;175(6):1841-3
Probab=98.78 E-value=2.2e-07 Score=103.12 Aligned_cols=176 Identities=12% Similarity=0.072 Sum_probs=108.3
Q ss_pred EEeecccChHHHHHhhCCcchHHHHHHHHHHhc-cCCcEEEEeccCcccccCHHHH-HHHHHHHHHhCCCCCCcEEEEEE
Q 044635 303 KILPVGIHMGQLQSVLSLPGTEAKVSELIKQFH-DQGKVMLLGVDDMDIFKGISLK-LLAMEQLLIQHPEWQGKVVLVQI 380 (831)
Q Consensus 303 ~v~P~GId~~~~~~~~~~~~~~~~~~~lr~~~~-~~~~~iil~VdRld~~KGi~~~-l~A~~~lL~~~P~~~~~vvLvqi 380 (831)
.++|+|+|...+... . . +++++ ++++++|+++||....|++... +.|++++.+. +++ ++.+
T Consensus 153 ~~i~n~v~~~~~~~~----~--~-----~~~~~~~~~~~~i~~~gg~~~~~~~~~~l~~a~~~l~~~--~~~----~~~~ 215 (348)
T TIGR01133 153 VLVGNPVRQEIRSLP----V--P-----RERFGLREGKPTILVLGGSQGAKILNELVPKALAKLAEK--GIQ----IVHQ 215 (348)
T ss_pred eEEcCCcCHHHhccc----c--h-----hhhcCCCCCCeEEEEECCchhHHHHHHHHHHHHHHHhhc--CcE----EEEE
Confidence 578999997655321 0 0 12344 4577889999998888997664 4788777542 222 3334
Q ss_pred ecCCCCCchhHHHHHHHHHHHHHHHhccCCCCCCccEEEecCCCCHHHHHHHHHHcCEeEECCC----ccCCCCCCCCCc
Q 044635 381 ANPARGRGKDVKEVQAETYSTVERINQTFGKPGYDPVVLIDEPLKFYERIAYYVVAECCLVTAV----RDGSEPSSPKKS 456 (831)
Q Consensus 381 g~p~r~~~~~~~~l~~~i~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv~vvtS~----~eGma~~~~~~g 456 (831)
+. +++. +++ ++.+.+. +...++.+. .. ++..+|+.||++|.+|- .|.|++ +.
T Consensus 216 ~g----~~~~-~~l----~~~~~~~-------~l~~~v~~~---~~-~~~~~l~~ad~~v~~~g~~~l~Ea~~~----g~ 271 (348)
T TIGR01133 216 TG----KNDL-EKV----KNVYQEL-------GIEAIVTFI---DE-NMAAAYAAADLVISRAGASTVAELAAA----GV 271 (348)
T ss_pred CC----cchH-HHH----HHHHhhC-------CceEEecCc---cc-CHHHHHHhCCEEEECCChhHHHHHHHc----CC
Confidence 31 2221 333 3333321 222344333 22 78999999999998762 123333 45
Q ss_pred eEEEecccccc-------ccc---CCCceeCCCC--HHHHHHHHHHHhcCCHHHHHHHHHHHhhhhccCCHHHHHH
Q 044635 457 MLVVSEFIGCS-------PSL---SGAIRVNPWN--IDAVSDAMDSALEMADQEKQLRHEKHYRYVSTHDVGYWAR 520 (831)
Q Consensus 457 ~lVlSe~~G~~-------~~l---~~allVnP~d--~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~ 520 (831)
|+|++...|.. +.+ ..|++++|.| +++++++|.++++ +++.++...+..++++..+...++++
T Consensus 272 Pvv~~~~~~~~~~~~~~~~~i~~~~~G~~~~~~~~~~~~l~~~i~~ll~-~~~~~~~~~~~~~~~~~~~~~~~i~~ 346 (348)
T TIGR01133 272 PAILIPYPYAADDQYYNAKFLEDLGAGLVIRQKELLPEKLLEALLKLLL-DPANLEAMAEAARKLAKPDAAKRIAE 346 (348)
T ss_pred CEEEeeCCCCccchhhHHHHHHHCCCEEEEecccCCHHHHHHHHHHHHc-CHHHHHHHHHHHHhcCCccHHHHHHh
Confidence 77776654422 233 4588898876 9999999999996 44555555666777787776666554
No 127
>cd01635 Glycosyltransferase_GTB_type Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. The structures of the formed glycoconjugates are extremely diverse, reflecting a wide range of biological functions. The members of this family share a common GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=98.74 E-value=2.8e-07 Score=94.34 Aligned_cols=107 Identities=14% Similarity=0.109 Sum_probs=70.7
Q ss_pred eccCcccccCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhccCCCCCCccEEEecCC
Q 044635 344 GVDDMDIFKGISLKLLAMEQLLIQHPEWQGKVVLVQIANPARGRGKDVKEVQAETYSTVERINQTFGKPGYDPVVLIDEP 423 (831)
Q Consensus 344 ~VdRld~~KGi~~~l~A~~~lL~~~P~~~~~vvLvqig~p~r~~~~~~~~l~~~i~~lv~~IN~~~g~~~~~pv~~~~~~ 423 (831)
++||+.+.||+..+++|+..+.+++|+++ |+++|... +....+..+.. .+. ...|.++. .
T Consensus 109 ~~g~~~~~k~~~~~~~a~~~l~~~~~~~~----~~i~G~~~-----~~~~~~~~~~~--------~~~--~~~v~~~~-~ 168 (229)
T cd01635 109 FVGRLAPEKGLDDLIEAFALLKERGPDLK----LVIAGDGP-----EREYLEELLAA--------LLL--LDRVIFLG-G 168 (229)
T ss_pred EEEeecccCCHHHHHHHHHHHHHhCCCeE----EEEEeCCC-----ChHHHHHHHHh--------cCC--cccEEEeC-C
Confidence 89999999999999999999988888765 88888432 11111111111 111 12455554 4
Q ss_pred C-CHHHHHHHHHHcCEeEECCCccCCCC---CCC-CCceEEEeccccccccc
Q 044635 424 L-KFYERIAYYVVAECCLVTAVRDGSEP---SSP-KKSMLVVSEFIGCSPSL 470 (831)
Q Consensus 424 v-~~~el~aly~~ADv~vvtS~~eGma~---~~~-~~g~lVlSe~~G~~~~l 470 (831)
+ +.+++..+++.||+++.||..||+.. ++. .+.|+|+|...|..+.+
T Consensus 169 ~~~~~~~~~~~~~~di~l~~~~~e~~~~~~~Eam~~g~pvi~s~~~~~~e~i 220 (229)
T cd01635 169 LDPEELLALLLAAADVFVLPSLREGFGLVVLEAMACGLPVIATDVGGPPEIV 220 (229)
T ss_pred CCcHHHHHHHhhcCCEEEecccccCcChHHHHHHhCCCCEEEcCCCCcceEE
Confidence 5 55666777777999999999998821 122 25577888777665544
No 128
>COG0438 RfaG Glycosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=98.73 E-value=5.6e-07 Score=96.93 Aligned_cols=193 Identities=18% Similarity=0.222 Sum_probs=127.8
Q ss_pred EEEEeecccChHHHHHhhCCcchHHHHHHHHHHhccCC--cEEEEeccCcccccCHHHHHHHHHHHHHhCCCCCCcEEEE
Q 044635 301 SIKILPVGIHMGQLQSVLSLPGTEAKVSELIKQFHDQG--KVMLLGVDDMDIFKGISLKLLAMEQLLIQHPEWQGKVVLV 378 (831)
Q Consensus 301 ~i~v~P~GId~~~~~~~~~~~~~~~~~~~lr~~~~~~~--~~iil~VdRld~~KGi~~~l~A~~~lL~~~P~~~~~vvLv 378 (831)
.+.+.|.|++...+... +... ..+ ..+++++||+++.||+...++|+..+.+..++ +.++
T Consensus 173 ~~~~~~~~~~~~~~~~~-------------~~~~-~~~~~~~~i~~~g~~~~~k~~~~~i~~~~~~~~~~~~----~~~~ 234 (381)
T COG0438 173 KIVVIPNGIDTEKFAPA-------------RIGL-LPEGGKFVVLYVGRLDPEKGLDLLIEAAAKLKKRGPD----IKLV 234 (381)
T ss_pred CceEecCCcCHHHcCcc-------------ccCC-CcccCceEEEEeeccChhcCHHHHHHHHHHhhhhcCC----eEEE
Confidence 56788999999877531 0011 122 37999999999999999999999999887766 4477
Q ss_pred EEecCCCCCchhHHHHHHHHHHHHHHHhccCCCCCCccEEEecCCCCHHHHHHHHHHcCEeEECCCccCCC---CCCC-C
Q 044635 379 QIANPARGRGKDVKEVQAETYSTVERINQTFGKPGYDPVVLIDEPLKFYERIAYYVVAECCLVTAVRDGSE---PSSP-K 454 (831)
Q Consensus 379 qig~p~r~~~~~~~~l~~~i~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv~vvtS~~eGma---~~~~-~ 454 (831)
.+|..... ...+.. ++...+. .+.+.+.+.++.+++..+|+.||+++.||..||++ .++. .
T Consensus 235 ~~g~~~~~----~~~~~~----~~~~~~~-------~~~v~~~g~~~~~~~~~~~~~~~~~v~ps~~e~~~~~~~Ea~a~ 299 (381)
T COG0438 235 IVGDGPER----REELEK----LAKKLGL-------EDNVKFLGYVPDEELAELLASADVFVLPSLSEGFGLVLLEAMAA 299 (381)
T ss_pred EEcCCCcc----HHHHHH----HHHHhCC-------CCcEEEecccCHHHHHHHHHhCCEEEeccccccchHHHHHHHhc
Confidence 77743211 122222 3333221 12333477888889999999999999999888872 1221 2
Q ss_pred CceEEEecccccccccCC---CceeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHhhhh-ccCCHHHHHHHHHHHHH
Q 044635 455 KSMLVVSEFIGCSPSLSG---AIRVNPWNIDAVSDAMDSALEMADQEKQLRHEKHYRYV-STHDVGYWARSFLQDLE 527 (831)
Q Consensus 455 ~g~lVlSe~~G~~~~l~~---allVnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v-~~~~~~~W~~~~l~~l~ 527 (831)
+.|+|++...|..+.+.+ |+++++.|++++++++..++++. +.++...+..++.+ ..+++..-++.+..-+.
T Consensus 300 g~pvi~~~~~~~~e~~~~~~~g~~~~~~~~~~~~~~i~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 375 (381)
T COG0438 300 GTPVIASDVGGIPEVVEDGETGLLVPPGDVEELADALEQLLEDP-ELREELGEAARERVEEEFSWERIAEQLLELYE 375 (381)
T ss_pred CCcEEECCCCChHHHhcCCCceEecCCCCHHHHHHHHHHHhcCH-HHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Confidence 357788888777777743 77888888999999999999877 33333333233334 46665555554444443
No 129
>cd01427 HAD_like Haloacid dehalogenase-like hydrolases. The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.
Probab=98.71 E-value=4.5e-08 Score=92.29 Aligned_cols=56 Identities=27% Similarity=0.332 Sum_probs=46.5
Q ss_pred eEEecCCCccCCCCCC-----CCCCCHHHHHHHHHHhhcCCCeEEEECCCCHhhHHHHhCCC
Q 044635 575 AILLDYDGTLMPQASI-----DKSPNSKTIDILNSLCRDKNNMVFLVSAKSRKTLAEWFSPC 631 (831)
Q Consensus 575 li~~D~DGTLl~~~~~-----~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~~ 631 (831)
+++||+||||++..+. ...+.+.+.+.|++|++ .|..++|+|||....+..++..+
T Consensus 1 ~~vfD~D~tl~~~~~~~~~~~~~~~~~~~~~~l~~l~~-~g~~i~ivS~~~~~~~~~~~~~~ 61 (139)
T cd01427 1 AVLFDLDGTLLDSEPGIAEIEELELYPGVKEALKELKE-KGIKLALATNKSRREVLELLEEL 61 (139)
T ss_pred CeEEccCCceEccCccccccccCCcCcCHHHHHHHHHH-CCCeEEEEeCchHHHHHHHHHHc
Confidence 5899999999994321 13778999999999987 48999999999999999988753
No 130
>PRK11133 serB phosphoserine phosphatase; Provisional
Probab=98.70 E-value=3.9e-07 Score=99.86 Aligned_cols=65 Identities=17% Similarity=0.188 Sum_probs=53.8
Q ss_pred CCHHHHHHHHHHHhhhcCCCcccEEEEcCCchhHHHHHHcchhcCCCCCCCCCceEEEEeCCC---CcccceEeC--Chh
Q 044635 738 VNKGLVAKRLLSTMQEREMLPDFVLCVGDDRSDEDMFEVIISSMAGPSIAPRAEVFACTVGRK---PSKAKYYLD--DTV 812 (831)
Q Consensus 738 vnKG~al~~Ll~~l~~~g~~~d~vla~GD~~NDe~Mf~~a~~~~~~~~~~~~~~~~~v~vG~~---~s~A~y~l~--d~~ 812 (831)
..|+.+++.+++++ |++++++++|||+.||++|++.+|. +|++..+ +..|++.++ +.+
T Consensus 247 k~K~~~L~~la~~l---gi~~~qtIaVGDg~NDl~m~~~AGl--------------giA~nAkp~Vk~~Ad~~i~~~~l~ 309 (322)
T PRK11133 247 QYKADTLTRLAQEY---EIPLAQTVAIGDGANDLPMIKAAGL--------------GIAYHAKPKVNEQAQVTIRHADLM 309 (322)
T ss_pred ccHHHHHHHHHHHc---CCChhhEEEEECCHHHHHHHHHCCC--------------eEEeCCCHHHHhhCCEEecCcCHH
Confidence 57999999999998 9999999999999999999999984 5666333 468999986 567
Q ss_pred HHHHHHH
Q 044635 813 EIVRLMQ 819 (831)
Q Consensus 813 eV~~~L~ 819 (831)
+|+.+|.
T Consensus 310 ~~l~~~~ 316 (322)
T PRK11133 310 GVLCILS 316 (322)
T ss_pred HHHHHhc
Confidence 7776664
No 131
>TIGR02094 more_P_ylases alpha-glucan phosphorylases. This family consists of known phosphorylases, and homologs believed to share the function of using inorganic phosphate to cleave an alpha 1,4 linkage between the terminal glucose residue and the rest of the polymer (maltodextrin, glycogen, etc.). The name of the glucose storage polymer substrate, and therefore the name of this enzyme, depends on the chain lengths and branching patterns. A number of the members of this family have been shown to operate on small maltodextrins, as may be obtained by utilization of exogenous sources. This family represents a distinct clade from the related family modeled by TIGR02093/PF00343.
Probab=98.63 E-value=1.2e-05 Score=95.14 Aligned_cols=179 Identities=13% Similarity=0.139 Sum_probs=114.2
Q ss_pred CCcEEEEeccCcccccCHHHHHHHHHHHHH--hCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhccCCCCCC
Q 044635 337 QGKVMLLGVDDMDIFKGISLKLLAMEQLLI--QHPEWQGKVVLVQIANPARGRGKDVKEVQAETYSTVERINQTFGKPGY 414 (831)
Q Consensus 337 ~~~~iil~VdRld~~KGi~~~l~A~~~lL~--~~P~~~~~vvLvqig~p~r~~~~~~~~l~~~i~~lv~~IN~~~g~~~~ 414 (831)
++..++..|.|+..-||+++++.+++++++ ++|+ ..+.||..|...-.+.. -.++.+.+.+++++ -.|. +
T Consensus 387 pd~~~ig~v~Rl~~yKr~dLil~~i~~l~~i~~~~~--~pvq~V~~Gka~p~d~~-gk~~i~~i~~la~~--~~~~--~- 458 (601)
T TIGR02094 387 PDVLTIGFARRFATYKRADLIFRDLERLARILNNPE--RPVQIVFAGKAHPADGE-GKEIIQRIVEFSKR--PEFR--G- 458 (601)
T ss_pred CCCcEEEEEEcchhhhhHHHHHHHHHHHHHHhhCCC--CCeEEEEEEecCcccch-HHHHHHHHHHHHhc--ccCC--C-
Confidence 456799999999999999999999999985 5565 24778877754322211 13455666666542 0122 1
Q ss_pred ccEEEecCCCCHHHHHHHHHHcCEeEE-CCC-ccCCCC---CCCCCceEEEeccccccccc---CCCceeCC--------
Q 044635 415 DPVVLIDEPLKFYERIAYYVVAECCLV-TAV-RDGSEP---SSPKKSMLVVSEFIGCSPSL---SGAIRVNP-------- 478 (831)
Q Consensus 415 ~pv~~~~~~v~~~el~aly~~ADv~vv-tS~-~eGma~---~~~~~g~lVlSe~~G~~~~l---~~allVnP-------- 478 (831)
.|+++.+ .+-.--..+|.+||+++. ||. .|.-+. -+...|.|.+|-.-|...+. .+|+.+.+
T Consensus 459 -kv~f~~~-Yd~~lA~~i~aG~Dv~L~~Psr~~EacGtsqMka~~nGgL~~sv~DG~~~E~~~~~nGf~f~~~~~~~~~~ 536 (601)
T TIGR02094 459 -RIVFLEN-YDINLARYLVSGVDVWLNNPRRPLEASGTSGMKAAMNGVLNLSILDGWWGEGYDGDNGWAIGDGEEYDDEE 536 (601)
T ss_pred -CEEEEcC-CCHHHHHHHhhhheeEEeCCCCCcCCchHHHHHHHHcCCceeecccCcccccCCCCcEEEECCCccccccc
Confidence 4666654 455555678999999999 665 663211 11235778888877776554 46888885
Q ss_pred ----CCHHHHHHHHHHHhc-----CCH----HHHHHHHH-HHhhhhccCCHHHHHHHHHHH
Q 044635 479 ----WNIDAVSDAMDSALE-----MAD----QEKQLRHE-KHYRYVSTHDVGYWARSFLQD 525 (831)
Q Consensus 479 ----~d~~~~A~ai~~aL~-----m~~----~er~~r~~-~~~~~v~~~~~~~W~~~~l~~ 525 (831)
.|.+++-++|.+++- .+. .+...+++ .|......+++.+-++++++.
T Consensus 537 ~~d~~da~~l~~~L~~ai~~~yy~~~~~~~p~~W~~~~k~am~~~~~~fsw~r~a~~Y~~~ 597 (601)
T TIGR02094 537 EQDRLDAEALYDLLENEVIPLYYDRDEKGIPADWVEMMKESIATIAPRFSTNRMVREYVDK 597 (601)
T ss_pred cccCCCHHHHHHHHHHHHHHHHhcCCcccCcHHHHHHHHHHHhccCCCCCHHHHHHHHHHH
Confidence 899999999988772 111 12223332 233333457777777766543
No 132
>TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit. Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases.
Probab=98.55 E-value=4.4e-07 Score=90.09 Aligned_cols=138 Identities=17% Similarity=0.158 Sum_probs=95.5
Q ss_pred CceeEEecCCCccCCCC---CC----CCCCCHHHHHHHHHHhhcCCCeEEEECCCCHhhHHHHhCCCCCceEEecCCEEE
Q 044635 572 TTRAILLDYDGTLMPQA---SI----DKSPNSKTIDILNSLCRDKNNMVFLVSAKSRKTLAEWFSPCENLGIAAEHGYFF 644 (831)
Q Consensus 572 ~~rli~~D~DGTLl~~~---~~----~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~~~~~~liaenGa~i 644 (831)
..|+++||+||||++.+ +. .+..+.+-...++.|.+ .|..++|+|+++...+...+..+. +.
T Consensus 6 ~i~~~v~d~dGv~tdg~~~~~~~g~~~~~~~~~D~~~~~~L~~-~Gi~laIiT~k~~~~~~~~l~~lg---i~------- 74 (169)
T TIGR02726 6 NIKLVILDVDGVMTDGRIVINDEGIESRNFDIKDGMGVIVLQL-CGIDVAIITSKKSGAVRHRAEELK---IK------- 74 (169)
T ss_pred cCeEEEEeCceeeECCeEEEcCCCcEEEEEecchHHHHHHHHH-CCCEEEEEECCCcHHHHHHHHHCC---Cc-------
Confidence 37999999999999831 11 12335566677777866 588999999988888777776431 00
Q ss_pred EeCCCceEEEcCCcCCccHHHHHHHHHHHHhccCCCeeEeeccceEEEeeccCCCccchHHHHHHHHHHHhHhcCCCeEE
Q 044635 645 RLRRDEEWETCIPVADCGWKQIAEPVMKLYTETTDGSTIEDKETALVWSYEDADPDFGSCQAKELLDHLESVLANEPVTV 724 (831)
Q Consensus 645 ~~~~~~~w~~~~~~~~~~w~~~v~~il~~~~e~~~gs~ie~k~~~l~~~~~~~d~~~~~~~a~el~~~L~~~l~~~~v~v 724 (831)
.|.. .
T Consensus 75 ------~~f~------------------------------------------~--------------------------- 79 (169)
T TIGR02726 75 ------RFHE------------------------------------------G--------------------------- 79 (169)
T ss_pred ------EEEe------------------------------------------c---------------------------
Confidence 0000 0
Q ss_pred EEcCeEEEEEeCCCCHHHHHHHHHHHhhhcCCCcccEEEEcCCchhHHHHHHcchhcCCCCCCCCCceEEEEeCCC----
Q 044635 725 KSGQNLVEVKPQGVNKGLVAKRLLSTMQEREMLPDFVLCVGDDRSDEDMFEVIISSMAGPSIAPRAEVFACTVGRK---- 800 (831)
Q Consensus 725 ~~g~~~vEV~p~gvnKG~al~~Ll~~l~~~g~~~d~vla~GD~~NDe~Mf~~a~~~~~~~~~~~~~~~~~v~vG~~---- 800 (831)
+ -.|-..++.+++++ +++++++++|||+.||++|++.++. +++|+++
T Consensus 80 --------~----kpkp~~~~~~~~~l---~~~~~ev~~iGD~~nDi~~~~~ag~--------------~~am~nA~~~l 130 (169)
T TIGR02726 80 --------I----KKKTEPYAQMLEEM---NISDAEVCYVGDDLVDLSMMKRVGL--------------AVAVGDAVADV 130 (169)
T ss_pred --------C----CCCHHHHHHHHHHc---CcCHHHEEEECCCHHHHHHHHHCCC--------------eEECcCchHHH
Confidence 0 13556788888887 8999999999999999999999985 5666664
Q ss_pred CcccceEeC--Chh-HHHHHHHHHHhh
Q 044635 801 PSKAKYYLD--DTV-EIVRLMQGLACV 824 (831)
Q Consensus 801 ~s~A~y~l~--d~~-eV~~~L~~L~~~ 824 (831)
+..|+|++. +.+ .+..+++.+.+.
T Consensus 131 k~~A~~I~~~~~~~g~v~e~~e~il~~ 157 (169)
T TIGR02726 131 KEAAAYVTTARGGHGAVREVAELILKA 157 (169)
T ss_pred HHhCCEEcCCCCCCCHHHHHHHHHHHh
Confidence 578888874 333 356666666543
No 133
>KOG0853 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis]
Probab=98.52 E-value=5.2e-06 Score=93.96 Aligned_cols=183 Identities=13% Similarity=0.054 Sum_probs=130.2
Q ss_pred CCcEEEEeccCcccccCHHHHHHHHHHHHHhCCCCCC-cEEEEEEecC-CCCCchhHHHHHHHHHHHHHHHhccCCCCCC
Q 044635 337 QGKVMLLGVDDMDIFKGISLKLLAMEQLLIQHPEWQG-KVVLVQIANP-ARGRGKDVKEVQAETYSTVERINQTFGKPGY 414 (831)
Q Consensus 337 ~~~~iil~VdRld~~KGi~~~l~A~~~lL~~~P~~~~-~vvLvqig~p-~r~~~~~~~~l~~~i~~lv~~IN~~~g~~~~ 414 (831)
..+.+...+-|+.+-||+...|.||..+...-|+..- ...++..|++ .-+...+..++.+++.+++++.+ .+|
T Consensus 271 ~~d~~~~siN~~~pgkd~~l~l~a~~~~~~~i~~~~~~~~hl~~~g~~G~d~~~sen~~~~~el~~lie~~~-l~g---- 345 (495)
T KOG0853|consen 271 GIDRFFPSINRFEPGKDQDLALPAFTLLHDSIPEPSISSEHLVVAGSRGYDERDSENVEYLKELLSLIEEYD-LLG---- 345 (495)
T ss_pred ccceEeeeeeecCCCCCceeehhhHHhhhcccCCCCCCceEEEEecCCCccccchhhHHHHHHHHHHHHHhC-ccC----
Confidence 3478999999999999999999999999887765111 2345555533 22233444566677777777643 122
Q ss_pred ccEEEecCCCCHHHHHHHHHHcCEeEECCCccCCCC---CCCCCc-eEEEeccccccccc---CCCceeCCCCHH---HH
Q 044635 415 DPVVLIDEPLKFYERIAYYVVAECCLVTAVRDGSEP---SSPKKS-MLVVSEFIGCSPSL---SGAIRVNPWNID---AV 484 (831)
Q Consensus 415 ~pv~~~~~~v~~~el~aly~~ADv~vvtS~~eGma~---~~~~~g-~lVlSe~~G~~~~l---~~allVnP~d~~---~~ 484 (831)
.++++..+.++.+.+.+++.+.+.++++..|-|+. +++.+| |+|++..+|.++++ .+|++++| +.+ .+
T Consensus 346 -~~v~~~~s~~~~~~yrl~adt~~v~~qPa~E~FGiv~IEAMa~glPvvAt~~GGP~EiV~~~~tG~l~dp-~~e~~~~~ 423 (495)
T KOG0853|consen 346 -QFVWFLPSTTRVAKYRLAADTKGVLYQPANEHFGIVPIEAMACGLPVVATNNGGPAEIVVHGVTGLLIDP-GQEAVAEL 423 (495)
T ss_pred -ceEEEecCCchHHHHHHHHhcceEEecCCCCCccceeHHHHhcCCCEEEecCCCceEEEEcCCcceeeCC-chHHHHHH
Confidence 46667667888888888888888899998897732 334444 77777777788877 57999999 676 59
Q ss_pred HHHHHHHhcCCHHHHHHHHHHHhhhhcc-CCHHHHHHHHHHHHHHHHH
Q 044635 485 SDAMDSALEMADQEKQLRHEKHYRYVST-HDVGYWARSFLQDLERTCR 531 (831)
Q Consensus 485 A~ai~~aL~m~~~er~~r~~~~~~~v~~-~~~~~W~~~~l~~l~~~~~ 531 (831)
|++|.++.+.|. .+.+..++.++.|.+ +++ +.|.+.+.....
T Consensus 424 a~~~~kl~~~p~-l~~~~~~~G~~rV~e~fs~----~~~~~ri~~~~~ 466 (495)
T KOG0853|consen 424 ADALLKLRRDPE-LWARMGKNGLKRVKEMFSW----QHYSERIASVLG 466 (495)
T ss_pred HHHHHHHhcCHH-HHHHHHHHHHHHHHHHHhH----HHHHHHHHHHhH
Confidence 999999998654 477777788999988 554 555555554443
No 134
>TIGR03713 acc_sec_asp1 accessory Sec system protein Asp1. This protein is designated Asp1 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.
Probab=98.48 E-value=6e-06 Score=96.40 Aligned_cols=271 Identities=13% Similarity=0.132 Sum_probs=165.8
Q ss_pred HHHHHHHHHHHHHHHH----cCCCCCEEE--EeCccccchHHHHHhhcCCCeEEEEEeccCCChHHhhcCCC--hHHHHH
Q 044635 182 AYVSVNKIFADRIMEV----INPEDDFVW--VHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYKTLPI--REEILR 253 (831)
Q Consensus 182 ~Y~~vN~~fa~~i~~~----~~~~~d~vw--vhDyhL~llp~~lr~~~~~~~i~~flH~PfP~~e~f~~lp~--r~eil~ 253 (831)
.|...+..++..+.+. .. ++|++. ++.-|... +....|..++.+..|+ ... |. -+..+.
T Consensus 202 ~f~~~~eLi~efl~~l~~~~~~-~~d~~Iva~Dr~~~~~----~~~~~~~~~~~ls~f~---~~~-----~~~~y~~~l~ 268 (519)
T TIGR03713 202 EYSNMDELIREKFQRYLKVEVK-DDDEIIVASDDRHNFL----VADTFPAKNLIFSLFS---ERN-----RHHTYLDLYE 268 (519)
T ss_pred EECCHHHHHHHHHHHHHHhhCC-CCCEEEEEcCchhhhh----HhhcCccceEEEEecc---Ccc-----cccchhhhhh
Confidence 3445555555554433 33 457777 67667665 4444554445556665 111 22 256666
Q ss_pred HHhcCCeEeecCHHhHHHHHHHHHHHhCCeecccCceeeEEEcCEEEEEEEeecccChHHHHHhhCCcchHHHHHHHHHH
Q 044635 254 ALLNSDLIGFHTFDYARHFLSCCSRMLGLTYESKRGYIGLEYYGRTVSIKILPVGIHMGQLQSVLSLPGTEAKVSELIKQ 333 (831)
Q Consensus 254 ~ll~~dligf~t~~~~~~Fl~~~~r~l~~~~~~~~~~~~~~~~gr~~~i~v~P~GId~~~~~~~~~~~~~~~~~~~lr~~ 333 (831)
.+-.+|.|..-|.+-.+...... +. .. ...+|..+|++.= +.. + ...++
T Consensus 269 ~~~~~d~iIv~T~~q~~~l~~~~----~~------------~~-~~~~v~~Ip~~~~--~~~-----~-------~~s~r 317 (519)
T TIGR03713 269 SLSRADLIIVDREDIERLLEENY----RE------------NY-VEFDISRITPFDT--RLR-----L-------GQSQQ 317 (519)
T ss_pred ChhhcCeEEEcCHHHHHHHHHHh----hh------------cc-cCCcceeeCccce--EEe-----c-------Chhhc
Confidence 77778877766654444332211 00 00 1123444565533 110 0 11123
Q ss_pred hccCCcEEEEeccCcccccCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhccCCCCC
Q 044635 334 FHDQGKVMLLGVDDMDIFKGISLKLLAMEQLLIQHPEWQGKVVLVQIANPARGRGKDVKEVQAETYSTVERINQTFGKPG 413 (831)
Q Consensus 334 ~~~~~~~iil~VdRld~~KGi~~~l~A~~~lL~~~P~~~~~vvLvqig~p~r~~~~~~~~l~~~i~~lv~~IN~~~g~~~ 413 (831)
. .++.|.+++||| +.|-+...|+|+.++++++|+.. |.+.|.. .. .++.+.+.++++++|..++...
T Consensus 318 ~--~~~~I~v~idrL-~ek~~~~~I~av~~~~~~~p~~~----L~~~gy~---~~---~~~~~~l~~~i~~~~~~~~~~~ 384 (519)
T TIGR03713 318 L--YETEIGFWIDGL-SDEELQQILQQLLQYILKNPDYE----LKILTYN---ND---NDITQLLEDILEQINEEYNQDK 384 (519)
T ss_pred c--cceEEEEEcCCC-ChHHHHHHHHHHHHHHhhCCCeE----EEEEEec---Cc---hhHHHHHHHHHHHHHhhhchhh
Confidence 3 567788888899 99999999999999999999876 7777732 11 2345666677777766532210
Q ss_pred -C---------------------ccEEEecCCCCHHHHHHHHHHcCEeEECCCccCCCC--CCCCCceEEEecccccccc
Q 044635 414 -Y---------------------DPVVLIDEPLKFYERIAYYVVAECCLVTAVRDGSEP--SSPKKSMLVVSEFIGCSPS 469 (831)
Q Consensus 414 -~---------------------~pv~~~~~~v~~~el~aly~~ADv~vvtS~~eGma~--~~~~~g~lVlSe~~G~~~~ 469 (831)
+ ...+.+.+..+..++.+.|.-|.++|.+|..||+.. ++...|.+++ .-|.++.
T Consensus 385 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~f~gy~~e~dl~~~~~~arl~id~s~~eg~~~~ieAiS~GiPqI--nyg~~~~ 462 (519)
T TIGR03713 385 NFFSLSEQDENQPILQTDEEQKEKERIAFTTLTNEEDLISALDKLRLIIDLSKEPDLYTQISGISAGIPQI--NKVETDY 462 (519)
T ss_pred hccccchhhhhhhcccchhhcccccEEEEEecCCHHHHHHHHhhheEEEECCCCCChHHHHHHHHcCCCee--ecCCcee
Confidence 0 025667777777899999999999999999999932 2334565555 5566766
Q ss_pred c---CCCceeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHhhhhccCC
Q 044635 470 L---SGAIRVNPWNIDAVSDAMDSALEMADQEKQLRHEKHYRYVSTHD 514 (831)
Q Consensus 470 l---~~allVnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~ 514 (831)
+ .+|.+| .|+.++++||...|+.+. ....-....++...+++
T Consensus 463 V~d~~NG~li--~d~~~l~~al~~~L~~~~-~wn~~~~~sy~~~~~yS 507 (519)
T TIGR03713 463 VEHNKNGYII--DDISELLKALDYYLDNLK-NWNYSLAYSIKLIDDYS 507 (519)
T ss_pred eEcCCCcEEe--CCHHHHHHHHHHHHhCHH-HHHHHHHHHHHHHHHhh
Confidence 6 489999 689999999999998543 33333333444444443
No 135
>PRK00025 lpxB lipid-A-disaccharide synthase; Reviewed
Probab=98.46 E-value=2e-05 Score=88.79 Aligned_cols=139 Identities=15% Similarity=0.106 Sum_probs=85.9
Q ss_pred HHHHHhc-cCCcEE-EEe-ccCcccccC-HHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHH
Q 044635 329 ELIKQFH-DQGKVM-LLG-VDDMDIFKG-ISLKLLAMEQLLIQHPEWQGKVVLVQIANPARGRGKDVKEVQAETYSTVER 404 (831)
Q Consensus 329 ~lr~~~~-~~~~~i-il~-VdRld~~KG-i~~~l~A~~~lL~~~P~~~~~vvLvqig~p~r~~~~~~~~l~~~i~~lv~~ 404 (831)
.++++++ +.++++ ++. -+|....|+ ++.+++|++.+.+++|+++ +++++. +++.. +++++++.+
T Consensus 175 ~~~~~l~~~~~~~~il~~~gsr~~~~~~~~~~l~~a~~~l~~~~~~~~----~ii~~~----~~~~~----~~~~~~~~~ 242 (380)
T PRK00025 175 AARARLGLDPDARVLALLPGSRGQEIKRLLPPFLKAAQLLQQRYPDLR----FVLPLV----NPKRR----EQIEEALAE 242 (380)
T ss_pred HHHHHcCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHhCCCeE----EEEecC----ChhhH----HHHHHHHhh
Confidence 4566776 445554 343 347766554 6889999999988888764 776652 12222 333333332
Q ss_pred HhccCCCCCCccEEEecCCCCHHHHHHHHHHcCEeEECCCc---cCCCCCCCCCceEEEe-----------------ccc
Q 044635 405 INQTFGKPGYDPVVLIDEPLKFYERIAYYVVAECCLVTAVR---DGSEPSSPKKSMLVVS-----------------EFI 464 (831)
Q Consensus 405 IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv~vvtS~~---eGma~~~~~~g~lVlS-----------------e~~ 464 (831)
. + ++ .+.++. .++..+|+.||+++++|-. |-|++ +.|+|++ .+.
T Consensus 243 ~----~--~~-~v~~~~-----~~~~~~~~~aDl~v~~sG~~~lEa~a~----G~PvI~~~~~~~~~~~~~~~~~~~~~~ 306 (380)
T PRK00025 243 Y----A--GL-EVTLLD-----GQKREAMAAADAALAASGTVTLELALL----KVPMVVGYKVSPLTFWIAKRLVKVPYV 306 (380)
T ss_pred c----C--CC-CeEEEc-----ccHHHHHHhCCEEEECccHHHHHHHHh----CCCEEEEEccCHHHHHHHHHHHcCCee
Confidence 1 0 11 244433 3789999999999998811 33344 4566666 333
Q ss_pred ccccccC-----CCceeCCCCHHHHHHHHHHHhcCC
Q 044635 465 GCSPSLS-----GAIRVNPWNIDAVSDAMDSALEMA 495 (831)
Q Consensus 465 G~~~~l~-----~allVnP~d~~~~A~ai~~aL~m~ 495 (831)
|.+..+. .+++++..|+++++++|.+.|+.+
T Consensus 307 ~l~~~~~~~~~~~~~~~~~~~~~~l~~~i~~ll~~~ 342 (380)
T PRK00025 307 SLPNLLAGRELVPELLQEEATPEKLARALLPLLADG 342 (380)
T ss_pred ehHHHhcCCCcchhhcCCCCCHHHHHHHHHHHhcCH
Confidence 3344442 236778889999999999999854
No 136
>smart00775 LNS2 LNS2 domain. This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance.
Probab=98.38 E-value=6.1e-07 Score=88.19 Aligned_cols=67 Identities=12% Similarity=0.213 Sum_probs=53.9
Q ss_pred eEEecCCCccCCCCCCC-----------CCCCHHHHHHHHHHhhcCCCeEEEECCCCHhhHH---HHhCC-------CCC
Q 044635 575 AILLDYDGTLMPQASID-----------KSPNSKTIDILNSLCRDKNNMVFLVSAKSRKTLA---EWFSP-------CEN 633 (831)
Q Consensus 575 li~~D~DGTLl~~~~~~-----------~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~---~~~~~-------~~~ 633 (831)
++++|+||||+. .+ ...++.+.++++++.+ .|+.|+++|||+..... +|+.. ++.
T Consensus 1 iVisDIDGTL~~---sd~~~~~~~~~~~~~~~~~~~~a~~~l~~-~G~~ivy~TGRp~~~~~~t~~~l~~~~~~~~~lp~ 76 (157)
T smart00775 1 IVISDIDGTITK---SDVLGHVVPIIGKDWTHPGVAKLYRDIQN-NGYKILYLTARPIGQADRTRSYLSQIKQDGHNLPH 76 (157)
T ss_pred CEEEecCCCCcc---cccccccccccccCcCCHHHHHHHHHHHH-cCCeEEEEcCCcHHHHHHHHHHHHHhhhccccCCC
Confidence 589999999998 34 5789999999999977 69999999999988764 67755 344
Q ss_pred ceEEecCCEEEE
Q 044635 634 LGIAAEHGYFFR 645 (831)
Q Consensus 634 ~~liaenGa~i~ 645 (831)
.++++.||+.+.
T Consensus 77 g~li~~~g~~~~ 88 (157)
T smart00775 77 GPVLLSPDRLFA 88 (157)
T ss_pred ceEEEcCCcchh
Confidence 467777777654
No 137
>PRK09814 beta-1,6-galactofuranosyltransferase; Provisional
Probab=98.37 E-value=7.4e-06 Score=90.87 Aligned_cols=229 Identities=14% Similarity=0.075 Sum_probs=125.5
Q ss_pred HHHHcCCCCCEEEEeCccccc--hHHHH-Hh-hcCCCeEEEEEeccCCChHHhhcCC-ChHHHHHHHhcCCeEeecCHHh
Q 044635 194 IMEVINPEDDFVWVHDYHLMV--LPTFL-RK-RFNRVKLGFFLHSPFPSSEIYKTLP-IREEILRALLNSDLIGFHTFDY 268 (831)
Q Consensus 194 i~~~~~~~~d~vwvhDyhL~l--lp~~l-r~-~~~~~~i~~flH~PfP~~e~f~~lp-~r~eil~~ll~~dligf~t~~~ 268 (831)
+...+++ +|+|.+|-.-+.. ++..+ ++ +..++|+++++|-=+|.. +.... .+......+-.||.|..++...
T Consensus 58 ~~~~~~~-~Dvv~~~~P~~~~~~~~~~~~~~~k~~~~k~i~~ihD~~~~~--~~~~~~~~~~~~~~~~~aD~iI~~S~~~ 134 (333)
T PRK09814 58 ILASLKP-GDIVIFQFPTWNGFEFDRLFVDKLKKKQVKIIILIHDIEPLR--FDSNYYLMKEEIDMLNLADVLIVHSKKM 134 (333)
T ss_pred HHhcCCC-CCEEEEECCCCchHHHHHHHHHHHHHcCCEEEEEECCcHHHh--ccccchhhHHHHHHHHhCCEEEECCHHH
Confidence 3444666 4999998633221 22322 22 112699999999766532 11111 1222344445689999998876
Q ss_pred HHHHHHHHHHHhCCeecccCceeeEEEcCEEEEEEEeecccChHHHHHhhCCcchHHHHHHHHHHhccCCcEEEEeccCc
Q 044635 269 ARHFLSCCSRMLGLTYESKRGYIGLEYYGRTVSIKILPVGIHMGQLQSVLSLPGTEAKVSELIKQFHDQGKVMLLGVDDM 348 (831)
Q Consensus 269 ~~~Fl~~~~r~l~~~~~~~~~~~~~~~~gr~~~i~v~P~GId~~~~~~~~~~~~~~~~~~~lr~~~~~~~~~iil~VdRl 348 (831)
.+.+.+ .|.. ..++.+.|+..+.... ..+... .+++.|+++||+
T Consensus 135 ~~~l~~-----~g~~---------------~~~i~~~~~~~~~~~~--------------~~~~~~--~~~~~i~yaG~l 178 (333)
T PRK09814 135 KDRLVE-----EGLT---------------TDKIIVQGIFDYLNDI--------------ELVKTP--SFQKKINFAGNL 178 (333)
T ss_pred HHHHHH-----cCCC---------------cCceEecccccccccc--------------cccccc--cCCceEEEecCh
Confidence 555542 1211 1122233332222100 001111 345689999999
Q ss_pred ccccCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhccCCCCCCccEEEecCCCCHHH
Q 044635 349 DIFKGISLKLLAMEQLLIQHPEWQGKVVLVQIANPARGRGKDVKEVQAETYSTVERINQTFGKPGYDPVVLIDEPLKFYE 428 (831)
Q Consensus 349 d~~KGi~~~l~A~~~lL~~~P~~~~~vvLvqig~p~r~~~~~~~~l~~~i~~lv~~IN~~~g~~~~~pv~~~~~~v~~~e 428 (831)
....++. +..|+++ |+++|.. ++.. . ....|. +.|.++.+|
T Consensus 179 ~k~~~l~----------~~~~~~~----l~i~G~g-----~~~~-------~------------~~~~V~-f~G~~~~ee 219 (333)
T PRK09814 179 EKSPFLK----------NWSQGIK----LTVFGPN-----PEDL-------E------------NSANIS-YKGWFDPEE 219 (333)
T ss_pred hhchHHH----------hcCCCCe----EEEECCC-----cccc-------c------------cCCCeE-EecCCCHHH
Confidence 8433211 1245544 8888832 2211 0 011344 567899999
Q ss_pred HHHHHHHcCEeEECCC-------ccC------------CCCCCCCCceEEEeccccccccc---CCCceeCCCCHHHHHH
Q 044635 429 RIAYYVVAECCLVTAV-------RDG------------SEPSSPKKSMLVVSEFIGCSPSL---SGAIRVNPWNIDAVSD 486 (831)
Q Consensus 429 l~aly~~ADv~vvtS~-------~eG------------ma~~~~~~g~lVlSe~~G~~~~l---~~allVnP~d~~~~A~ 486 (831)
+..+|+. |+.+++.- .+. ||+ +.|+|++..++.++.+ ..|+.|+ +.+++++
T Consensus 220 l~~~l~~-~~gLv~~~~~~~~~~~~y~~~~~P~K~~~ymA~----G~PVI~~~~~~~~~~V~~~~~G~~v~--~~~el~~ 292 (333)
T PRK09814 220 LPNELSK-GFGLVWDGDTNDGEYGEYYKYNNPHKLSLYLAA----GLPVIVWSKAAIADFIVENGLGFVVD--SLEELPE 292 (333)
T ss_pred HHHHHhc-CcCeEEcCCCCCccchhhhhccchHHHHHHHHC----CCCEEECCCccHHHHHHhCCceEEeC--CHHHHHH
Confidence 9999998 76665431 111 355 6688888888777777 3588887 6789999
Q ss_pred HHHHHhcCCHHHHHHHHHHHhhhh
Q 044635 487 AMDSALEMADQEKQLRHEKHYRYV 510 (831)
Q Consensus 487 ai~~aL~m~~~er~~r~~~~~~~v 510 (831)
+|... +++++.+..++.++..
T Consensus 293 ~l~~~---~~~~~~~m~~n~~~~~ 313 (333)
T PRK09814 293 IIDNI---TEEEYQEMVENVKKIS 313 (333)
T ss_pred HHHhc---CHHHHHHHHHHHHHHH
Confidence 98874 3455444334444433
No 138
>PF13692 Glyco_trans_1_4: Glycosyl transferases group 1; PDB: 3OY2_A 3OY7_B 2Q6V_A 2HY7_A 3CV3_A 3CUY_A.
Probab=98.33 E-value=1.8e-06 Score=82.01 Aligned_cols=124 Identities=19% Similarity=0.229 Sum_probs=79.3
Q ss_pred cEEEEeccCcccccCHHHHHH-HHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhccCCCCCCccE
Q 044635 339 KVMLLGVDDMDIFKGISLKLL-AMEQLLIQHPEWQGKVVLVQIANPARGRGKDVKEVQAETYSTVERINQTFGKPGYDPV 417 (831)
Q Consensus 339 ~~iil~VdRld~~KGi~~~l~-A~~~lL~~~P~~~~~vvLvqig~p~r~~~~~~~~l~~~i~~lv~~IN~~~g~~~~~pv 417 (831)
..+|++.|++.+.||+..+++ |++++.+++|+++ |+++|.. ++ ++.++ .. ..|
T Consensus 2 ~~~i~~~g~~~~~k~~~~li~~~~~~l~~~~p~~~----l~i~G~~-----~~------~l~~~-~~----------~~v 55 (135)
T PF13692_consen 2 ILYIGYLGRIRPDKGLEELIEAALERLKEKHPDIE----LIIIGNG-----PD------ELKRL-RR----------PNV 55 (135)
T ss_dssp -EEEE--S-SSGGGTHHHHHH-HHHHHHHHSTTEE----EEEECES-----S-------HHCCH-HH----------CTE
T ss_pred cccccccccccccccccchhhhHHHHHHHHCcCEE----EEEEeCC-----HH------HHHHh-cC----------CCE
Confidence 357999999999999999999 9999999999755 8888852 22 12222 00 135
Q ss_pred EEecCCCCHHHHHHHHHHcCEeEECCC-ccCCCC---CC-CCCceEEEeccccccccc---CCCceeCCCCHHHHHHHHH
Q 044635 418 VLIDEPLKFYERIAYYVVAECCLVTAV-RDGSEP---SS-PKKSMLVVSEFIGCSPSL---SGAIRVNPWNIDAVSDAMD 489 (831)
Q Consensus 418 ~~~~~~v~~~el~aly~~ADv~vvtS~-~eGma~---~~-~~~g~lVlSe~~G~~~~l---~~allVnP~d~~~~A~ai~ 489 (831)
.+ .+.+ +|+.++|+.||+++.|+. .+|+.. +. ..+.|+|++.. |+.... ..++.+ +.|+++++++|.
T Consensus 56 ~~-~g~~--~e~~~~l~~~dv~l~p~~~~~~~~~k~~e~~~~G~pvi~~~~-~~~~~~~~~~~~~~~-~~~~~~l~~~i~ 130 (135)
T PF13692_consen 56 RF-HGFV--EELPEILAAADVGLIPSRFNEGFPNKLLEAMAAGKPVIASDN-GAEGIVEEDGCGVLV-ANDPEELAEAIE 130 (135)
T ss_dssp EE-E-S---HHHHHHHHC-SEEEE-BSS-SCC-HHHHHHHCTT--EEEEHH-HCHCHS---SEEEE--TT-HHHHHHHHH
T ss_pred EE-cCCH--HHHHHHHHhCCEEEEEeeCCCcCcHHHHHHHHhCCCEEECCc-chhhheeecCCeEEE-CCCHHHHHHHHH
Confidence 55 4456 689999999999999985 555510 11 12557777777 655555 345666 889999999999
Q ss_pred HHhc
Q 044635 490 SALE 493 (831)
Q Consensus 490 ~aL~ 493 (831)
+++.
T Consensus 131 ~l~~ 134 (135)
T PF13692_consen 131 RLLN 134 (135)
T ss_dssp HHHH
T ss_pred HHhc
Confidence 9875
No 139
>cd04299 GT1_Glycogen_Phosphorylase_like This family is most closely related to the oligosaccharide phosphorylase domain family and other unidentified sequences. Oligosaccharide phosphorylase catalyzes the breakdown of oligosaccharides into glucose-1-phosphate units. They are important allosteric enzymes in carbohydrate metabolism. The members of this family are found in bacteria and Archaea.
Probab=98.33 E-value=2e-05 Score=95.02 Aligned_cols=181 Identities=13% Similarity=0.085 Sum_probs=114.2
Q ss_pred CcEEEEeccCcccccCHHHHHHHHHHHHH--hCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhccCCCCCCc
Q 044635 338 GKVMLLGVDDMDIFKGISLKLLAMEQLLI--QHPEWQGKVVLVQIANPARGRGKDVKEVQAETYSTVERINQTFGKPGYD 415 (831)
Q Consensus 338 ~~~iil~VdRld~~KGi~~~l~A~~~lL~--~~P~~~~~vvLvqig~p~r~~~~~~~~l~~~i~~lv~~IN~~~g~~~~~ 415 (831)
+..+|.++.|+..-|+..+++..++++++ .+|+ ..+.||..|...-.+. .-.++.+++.+++.. -+|. +
T Consensus 477 d~ltigfarRfa~YKR~~Lil~dl~rl~~il~~~~--~pvQ~IfaGKAhP~d~-~gK~iIk~i~~~a~~--p~~~--~-- 547 (778)
T cd04299 477 NVLTIGFARRFATYKRATLLLRDPERLKRLLNDPE--RPVQFIFAGKAHPADE-PGKELIQEIVEFSRR--PEFR--G-- 547 (778)
T ss_pred CccEEeeeecchhhhhHHHHHHHHHHHHHHhhCCC--CCeEEEEEEecCccch-HHHHHHHHHHHHHhC--cCCC--C--
Confidence 34489999999999999999999999865 3454 3577888775432221 113445555555441 0222 1
Q ss_pred cEEEecCCCCHHHHHHHHHHcCEeEECCC--ccCCCC---CCCCCceEEEeccccccccc---CCCceeCC---------
Q 044635 416 PVVLIDEPLKFYERIAYYVVAECCLVTAV--RDGSEP---SSPKKSMLVVSEFIGCSPSL---SGAIRVNP--------- 478 (831)
Q Consensus 416 pv~~~~~~v~~~el~aly~~ADv~vvtS~--~eGma~---~~~~~g~lVlSe~~G~~~~l---~~allVnP--------- 478 (831)
.|+|+.+ .+-.--..++..||+++.||. .|.-+. -+...|.|-+|..-|.-.+- .+|..+.+
T Consensus 548 kVvfle~-Yd~~lA~~LvaG~DvwLn~prrp~EAsGTSgMKA~~NG~LnlSvlDGww~E~~~g~nGwaig~~~~~~~~~~ 626 (778)
T cd04299 548 RIVFLED-YDMALARHLVQGVDVWLNTPRRPLEASGTSGMKAALNGGLNLSVLDGWWDEGYDGENGWAIGDGDEYEDDEY 626 (778)
T ss_pred cEEEEcC-CCHHHHHHHHhhhhhcccCCCCCCCCCccchHHHHHcCCeeeecccCccccccCCCCceEeCCCccccChhh
Confidence 4777664 555566778999999999999 662211 12336889999888876666 46888877
Q ss_pred ---CCHHHHHHHHHHHhc----CC-----HHHHHHHHHH-HhhhhccCCHHHHHHHHHHHHHH
Q 044635 479 ---WNIDAVSDAMDSALE----MA-----DQEKQLRHEK-HYRYVSTHDVGYWARSFLQDLER 528 (831)
Q Consensus 479 ---~d~~~~A~ai~~aL~----m~-----~~er~~r~~~-~~~~v~~~~~~~W~~~~l~~l~~ 528 (831)
.|.+++-+.|.+.+- .. +.+...+++. +......+++.+.++.+++.+..
T Consensus 627 ~d~~da~~Ly~~Le~~i~p~yy~r~~~g~p~~W~~~~k~sm~~~~p~fs~~Rmv~eY~~~~Y~ 689 (778)
T cd04299 627 QDAEEAEALYDLLENEVIPLFYDRDEGGYPPGWVAMMKHSMATLGPRFSAERMVREYVERFYL 689 (778)
T ss_pred cchhhHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHhcccCCCHHHHHHHHHHHhHH
Confidence 555666666654443 10 1223333333 34444567888888877777663
No 140
>TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those.
Probab=98.17 E-value=3.1e-05 Score=82.19 Aligned_cols=65 Identities=14% Similarity=0.213 Sum_probs=50.7
Q ss_pred eeEEecCCCccCCCCCCCCCCCHHHHHHHHHHhhcCCCeEEEECC---CCHhhHHHHhCCC----CCceEEecCCEE
Q 044635 574 RAILLDYDGTLMPQASIDKSPNSKTIDILNSLCRDKNNMVFLVSA---KSRKTLAEWFSPC----ENLGIAAEHGYF 643 (831)
Q Consensus 574 rli~~D~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SG---R~~~~l~~~~~~~----~~~~liaenGa~ 643 (831)
|+|++|+||||+. .+..+ +.+.++|++|.+ .|..|+++|| |+...+...+..+ ....+++.+|+.
T Consensus 2 ~~~~~D~DGtl~~---~~~~i-~~a~~~l~~l~~-~g~~~~~~Tnn~~r~~~~~~~~l~~~g~~~~~~~iit~~~~~ 73 (249)
T TIGR01457 2 KGYLIDLDGTMYK---GKERI-PEAETFVHELQK-RDIPYLFVTNNSTRTPESVAEMLASFDIPATLETVFTASMAT 73 (249)
T ss_pred CEEEEeCCCceEc---CCeeC-cCHHHHHHHHHH-CCCeEEEEeCCCCCCHHHHHHHHHHcCCCCChhhEeeHHHHH
Confidence 6899999999998 44444 479999999987 5999999985 8898888877654 233467777664
No 141
>TIGR00338 serB phosphoserine phosphatase SerB. Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins.
Probab=98.12 E-value=2.4e-05 Score=81.22 Aligned_cols=62 Identities=24% Similarity=0.303 Sum_probs=48.5
Q ss_pred CHHHHHHHHHHHhhhcCCCcccEEEEcCCchhHHHHHHcchhcCCCCCCCCCceEEEEeCCC---CcccceEeCC--hhH
Q 044635 739 NKGLVAKRLLSTMQEREMLPDFVLCVGDDRSDEDMFEVIISSMAGPSIAPRAEVFACTVGRK---PSKAKYYLDD--TVE 813 (831)
Q Consensus 739 nKG~al~~Ll~~l~~~g~~~d~vla~GD~~NDe~Mf~~a~~~~~~~~~~~~~~~~~v~vG~~---~s~A~y~l~d--~~e 813 (831)
.|...++.+++.+ ++++++++++||+.+|++|.+.++. ++.++.. ...|+|++.+ ..+
T Consensus 152 ~k~~~~~~~~~~~---~~~~~~~i~iGDs~~Di~aa~~ag~--------------~i~~~~~~~~~~~a~~~i~~~~~~~ 214 (219)
T TIGR00338 152 YKGKTLLILLRKE---GISPENTVAVGDGANDLSMIKAAGL--------------GIAFNAKPKLQQKADICINKKDLTD 214 (219)
T ss_pred ccHHHHHHHHHHc---CCCHHHEEEEECCHHHHHHHHhCCC--------------eEEeCCCHHHHHhchhccCCCCHHH
Confidence 4889999999987 8999999999999999999999974 3444443 3678898864 455
Q ss_pred HHHH
Q 044635 814 IVRL 817 (831)
Q Consensus 814 V~~~ 817 (831)
++.+
T Consensus 215 ~~~~ 218 (219)
T TIGR00338 215 ILPL 218 (219)
T ss_pred HHhh
Confidence 5544
No 142
>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458. This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.
Probab=98.11 E-value=6.3e-05 Score=80.24 Aligned_cols=49 Identities=18% Similarity=0.283 Sum_probs=40.8
Q ss_pred eeEEecCCCccCCCCCCCC---CCCHHHHHHHHHHhhcCCCeEEEECCCCHhhHHH
Q 044635 574 RAILLDYDGTLMPQASIDK---SPNSKTIDILNSLCRDKNNMVFLVSAKSRKTLAE 626 (831)
Q Consensus 574 rli~~D~DGTLl~~~~~~~---~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~ 626 (831)
|+|++|+||||+. .+. .+.+.+.++|++|.+ .|..++++|||+......
T Consensus 2 k~i~~D~DGtl~~---~~~~~~~~~~~a~~al~~l~~-~G~~~~~~Tn~~~~~~~~ 53 (257)
T TIGR01458 2 KGVLLDISGVLYI---SDAKSGVAVPGSQEAVKRLRG-ASVKVRFVTNTTKESKQD 53 (257)
T ss_pred CEEEEeCCCeEEe---CCCcccCcCCCHHHHHHHHHH-CCCeEEEEECCCCCCHHH
Confidence 6899999999998 333 378899999999987 599999999988775333
No 143
>TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like. Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences.
Probab=98.05 E-value=1.6e-05 Score=79.32 Aligned_cols=41 Identities=32% Similarity=0.494 Sum_probs=36.4
Q ss_pred EeCCCCHHHHHHHHHHHhhhcCCCcccEEEEcCCchhHHHHHHc
Q 044635 734 KPQGVNKGLVAKRLLSTMQEREMLPDFVLCVGDDRSDEDMFEVI 777 (831)
Q Consensus 734 ~p~gvnKG~al~~Ll~~l~~~g~~~d~vla~GD~~NDe~Mf~~a 777 (831)
.+.+.+|+.+++.+++.. +++++.++++||+.||++|++.+
T Consensus 137 ~~~~~~K~~~l~~~~~~~---~~~~~~~~~iGDs~~D~~~~~~a 177 (177)
T TIGR01488 137 NPEGECKGKVLKELLEES---KITLKKIIAVGDSVNDLPMLKLA 177 (177)
T ss_pred cCCcchHHHHHHHHHHHh---CCCHHHEEEEeCCHHHHHHHhcC
Confidence 366889999999998876 88899999999999999999864
No 144
>PRK10444 UMP phosphatase; Provisional
Probab=98.02 E-value=0.00015 Score=76.80 Aligned_cols=54 Identities=17% Similarity=0.227 Sum_probs=45.2
Q ss_pred ceeEEecCCCccCCCCCCCCCCCHHHHHHHHHHhhcCCCeEEEECCCCHhhHHHHhCCC
Q 044635 573 TRAILLDYDGTLMPQASIDKSPNSKTIDILNSLCRDKNNMVFLVSAKSRKTLAEWFSPC 631 (831)
Q Consensus 573 ~rli~~D~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~~ 631 (831)
+++|++|+||||+. .+ .+.+.+.++|++|.+ .|..++++|+|+......+...+
T Consensus 1 ~~~v~~DlDGtL~~---~~-~~~p~a~~~l~~L~~-~g~~~~~~Tn~~~~~~~~~~~~l 54 (248)
T PRK10444 1 IKNVICDIDGVLMH---DN-VAVPGAAEFLHRILD-KGLPLVLLTNYPSQTGQDLANRF 54 (248)
T ss_pred CcEEEEeCCCceEe---CC-eeCccHHHHHHHHHH-CCCeEEEEeCCCCCCHHHHHHHH
Confidence 47999999999998 34 678999999999987 59999999999987666655544
No 145
>COG1519 KdtA 3-deoxy-D-manno-octulosonic-acid transferase [Cell envelope biogenesis, outer membrane]
Probab=98.00 E-value=0.0034 Score=69.73 Aligned_cols=298 Identities=17% Similarity=0.239 Sum_probs=167.8
Q ss_pred HHHHHHHHHHHHHHcCCCCCEEEEeCcc----ccchHH--HHHhhcCCCeEEEEEecc---------CCChHHhhcCCCh
Q 044635 184 VSVNKIFADRIMEVINPEDDFVWVHDYH----LMVLPT--FLRKRFNRVKLGFFLHSP---------FPSSEIYKTLPIR 248 (831)
Q Consensus 184 ~~vN~~fa~~i~~~~~~~~d~vwvhDyh----L~llp~--~lr~~~~~~~i~~flH~P---------fP~~e~f~~lp~r 248 (831)
.+.+++|+- ......|++..||+|-=. ..++|- -||+++|+.+|..+--+| ||..-.-..+|..
T Consensus 32 ~r~~eRfg~-~~~~~~~~~p~vWiHaaSVGEv~a~~pLv~~l~~~~P~~~ilvTt~T~Tg~e~a~~~~~~~v~h~YlP~D 110 (419)
T COG1519 32 KRLGERFGF-YKPPVKPEGPLVWIHAASVGEVLAALPLVRALRERFPDLRILVTTMTPTGAERAAALFGDSVIHQYLPLD 110 (419)
T ss_pred HHHHHHhcc-cCCCCCCCCCeEEEEecchhHHHHHHHHHHHHHHhCCCCCEEEEecCccHHHHHHHHcCCCeEEEecCcC
Confidence 467778871 123344667899999544 234444 489999999999988776 4433333445532
Q ss_pred H-HHHHHHh---cCCeEeecCHHhHHHHHHHHHHHhCCeecccCceeeEEEcCEE---------------------EEEE
Q 044635 249 E-EILRALL---NSDLIGFHTFDYARHFLSCCSRMLGLTYESKRGYIGLEYYGRT---------------------VSIK 303 (831)
Q Consensus 249 ~-eil~~ll---~~dligf~t~~~~~~Fl~~~~r~l~~~~~~~~~~~~~~~~gr~---------------------~~i~ 303 (831)
. -..+..| ..|+..|---+.=-|++..|.+. |+. .+-.++|- +...
T Consensus 111 ~~~~v~rFl~~~~P~l~Ii~EtElWPnli~e~~~~-~~p--------~~LvNaRLS~rS~~~y~k~~~~~~~~~~~i~li 181 (419)
T COG1519 111 LPIAVRRFLRKWRPKLLIIMETELWPNLINELKRR-GIP--------LVLVNARLSDRSFARYAKLKFLARLLFKNIDLI 181 (419)
T ss_pred chHHHHHHHHhcCCCEEEEEeccccHHHHHHHHHc-CCC--------EEEEeeeechhhhHHHHHHHHHHHHHHHhccee
Confidence 1 1222222 44666665555556666666432 111 01111211 0111
Q ss_pred EeecccChHHHHHhh---------------CCcchHHHHHHHHHHhccCC-cEEEEeccCcccccCHHHHHHHHHHHHHh
Q 044635 304 ILPVGIHMGQLQSVL---------------SLPGTEAKVSELIKQFHDQG-KVMLLGVDDMDIFKGISLKLLAMEQLLIQ 367 (831)
Q Consensus 304 v~P~GId~~~~~~~~---------------~~~~~~~~~~~lr~~~~~~~-~~iil~VdRld~~KGi~~~l~A~~~lL~~ 367 (831)
+.=.-.|.++|.... ..+........+|.++ ++ +++++..+- ...--...+.|+..++++
T Consensus 182 ~aQse~D~~Rf~~LGa~~v~v~GNlKfd~~~~~~~~~~~~~~r~~l--~~~r~v~iaaST--H~GEeei~l~~~~~l~~~ 257 (419)
T COG1519 182 LAQSEEDAQRFRSLGAKPVVVTGNLKFDIEPPPQLAAELAALRRQL--GGHRPVWVAAST--HEGEEEIILDAHQALKKQ 257 (419)
T ss_pred eecCHHHHHHHHhcCCcceEEecceeecCCCChhhHHHHHHHHHhc--CCCCceEEEecC--CCchHHHHHHHHHHHHhh
Confidence 112223333333211 1233445667888888 44 888888887 333334478899999999
Q ss_pred CCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhccCCCC-------CCccEEEecCCCCHHHHHHHHHHcCEeE
Q 044635 368 HPEWQGKVVLVQIANPARGRGKDVKEVQAETYSTVERINQTFGKP-------GYDPVVLIDEPLKFYERIAYYVVAECCL 440 (831)
Q Consensus 368 ~P~~~~~vvLvqig~p~r~~~~~~~~l~~~i~~lv~~IN~~~g~~-------~~~pv~~~~~~v~~~el~aly~~ADv~v 440 (831)
+|+.. ||. . | +.++ --..+++++.+.+-+++.- .-++|.+.+ +.-|+..||++||+++
T Consensus 258 ~~~~l----lIl-V-P---RHpE---Rf~~v~~l~~~~gl~~~~rS~~~~~~~~tdV~l~D---tmGEL~l~y~~adiAF 322 (419)
T COG1519 258 FPNLL----LIL-V-P---RHPE---RFKAVENLLKRKGLSVTRRSQGDPPFSDTDVLLGD---TMGELGLLYGIADIAF 322 (419)
T ss_pred CCCce----EEE-e-c---CChh---hHHHHHHHHHHcCCeEEeecCCCCCCCCCcEEEEe---cHhHHHHHHhhccEEE
Confidence 99863 333 3 3 2333 3467888888887655321 122455433 3679999999999998
Q ss_pred ECCCccCCCC----CCCCCc-eEEEeccc----cccccc---CCCceeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHhh
Q 044635 441 VTAVRDGSEP----SSPKKS-MLVVSEFI----GCSPSL---SGAIRVNPWNIDAVSDAMDSALEMADQEKQLRHEKHYR 508 (831)
Q Consensus 441 vtS~~eGma~----~~~~~g-~lVlSe~~----G~~~~l---~~allVnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~ 508 (831)
|--.-..++. ++...+ |+|...++ -.++.+ .+++.|+. .+.+++++...+.. +++|....++...
T Consensus 323 VGGSlv~~GGHN~LEpa~~~~pvi~Gp~~~Nf~ei~~~l~~~ga~~~v~~--~~~l~~~v~~l~~~-~~~r~~~~~~~~~ 399 (419)
T COG1519 323 VGGSLVPIGGHNPLEPAAFGTPVIFGPYTFNFSDIAERLLQAGAGLQVED--ADLLAKAVELLLAD-EDKREAYGRAGLE 399 (419)
T ss_pred ECCcccCCCCCChhhHHHcCCCEEeCCccccHHHHHHHHHhcCCeEEECC--HHHHHHHHHHhcCC-HHHHHHHHHHHHH
Confidence 8544333422 222233 44444333 233333 34677775 77788888777764 6666666666666
Q ss_pred hhccC
Q 044635 509 YVSTH 513 (831)
Q Consensus 509 ~v~~~ 513 (831)
.+.++
T Consensus 400 ~v~~~ 404 (419)
T COG1519 400 FLAQN 404 (419)
T ss_pred HHHHh
Confidence 66554
No 146
>KOG1387 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis]
Probab=98.00 E-value=0.00017 Score=76.72 Aligned_cols=308 Identities=15% Similarity=0.225 Sum_probs=179.2
Q ss_pred hhhHHHHHHHHHHHHHHHHHH---cC-CCCCEEEE--eCccccchHHHHHhhcCCCeEEEEEeccCCChHHhhcCCChHH
Q 044635 177 RSLWQAYVSVNKIFADRIMEV---IN-PEDDFVWV--HDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYKTLPIREE 250 (831)
Q Consensus 177 ~~~w~~Y~~vN~~fa~~i~~~---~~-~~~d~vwv--hDyhL~llp~~lr~~~~~~~i~~flH~PfP~~e~f~~lp~r~e 250 (831)
...|..+.-.-|..+.-|+.. ++ |. | ||| -.|-+.. |.+ | ++.+.|+|-..|-|--|.+....+-.|++
T Consensus 123 a~~~~hfTllgQaigsmIl~~Eai~r~~P-d-i~IDtMGY~fs~-p~~-r-~l~~~~V~aYvHYP~iS~DML~~l~qrq~ 197 (465)
T KOG1387|consen 123 ASTWKHFTLLGQAIGSMILAFEAIIRFPP-D-IFIDTMGYPFSY-PIF-R-RLRRIPVVAYVHYPTISTDMLKKLFQRQK 197 (465)
T ss_pred cccccceehHHHHHHHHHHHHHHHHhCCc-h-heEecCCCcchh-HHH-H-HHccCceEEEEecccccHHHHHHHHhhhh
Confidence 344666666666665555421 22 21 3 777 3555443 433 2 26789999999988878877765544332
Q ss_pred HHHHHhcCCeEeecCHHhHHHHHHHHHHHhCC--eec----c-cCceeeEEEcCEEEEEEEeecccChHHHHHhhCCcch
Q 044635 251 ILRALLNSDLIGFHTFDYARHFLSCCSRMLGL--TYE----S-KRGYIGLEYYGRTVSIKILPVGIHMGQLQSVLSLPGT 323 (831)
Q Consensus 251 il~~ll~~dligf~t~~~~~~Fl~~~~r~l~~--~~~----~-~~~~~~~~~~gr~~~i~v~P~GId~~~~~~~~~~~~~ 323 (831)
= .+...----|-|-|..--. ..|. ++- + .+.+|.--+..++++| ++|+. +.+.+
T Consensus 198 s-------~~l~~~KlaY~rlFa~lY~-~~G~~ad~vm~NssWT~nHI~qiW~~~~~~i-VyPPC-~~e~l--------- 258 (465)
T KOG1387|consen 198 S-------GILVWGKLAYWRLFALLYQ-SAGSKADIVMTNSSWTNNHIKQIWQSNTCSI-VYPPC-STEDL--------- 258 (465)
T ss_pred c-------chhhhHHHHHHHHHHHHHH-hccccceEEEecchhhHHHHHHHhhccceeE-EcCCC-CHHHH---------
Confidence 1 1222222345555532110 0111 000 0 0111211222333333 34432 33333
Q ss_pred HHHHHHHHHHhc--cCCcEEEEeccCcccccCHHHHHHHHHHHHHhCCC--CCCcEEEEEEecCCCCCchhHHHHHHHHH
Q 044635 324 EAKVSELIKQFH--DQGKVMLLGVDDMDIFKGISLKLLAMEQLLIQHPE--WQGKVVLVQIANPARGRGKDVKEVQAETY 399 (831)
Q Consensus 324 ~~~~~~lr~~~~--~~~~~iil~VdRld~~KGi~~~l~A~~~lL~~~P~--~~~~vvLvqig~p~r~~~~~~~~l~~~i~ 399 (831)
++.++ ......+|+++.+.|.|+.. .|+-+...+.+.|. .-.++.|+++|+- |+ ++-++.-+.++
T Consensus 259 -------ks~~~te~~r~~~ll~l~Q~RPEKnH~-~Lql~Al~~~~~pl~a~~~~iKL~ivGSc-Rn--eeD~ervk~Lk 327 (465)
T KOG1387|consen 259 -------KSKFGTEGERENQLLSLAQFRPEKNHK-ILQLFALYLKNEPLEASVSPIKLIIVGSC-RN--EEDEERVKSLK 327 (465)
T ss_pred -------HHHhcccCCcceEEEEEeecCcccccH-HHHHHHHHHhcCchhhccCCceEEEEecc-CC--hhhHHHHHHHH
Confidence 22232 24467899999999999999 77777788888887 3346778888843 32 33344556677
Q ss_pred HHHHHHhccCCCCCCccEEEecCCCCHHHHHHHHHHcCEeEECCCccCCCC---CCCCCceEEEecccccc--ccc----
Q 044635 400 STVERINQTFGKPGYDPVVLIDEPLKFYERIAYYVVAECCLVTAVRDGSEP---SSPKKSMLVVSEFIGCS--PSL---- 470 (831)
Q Consensus 400 ~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv~vvtS~~eGma~---~~~~~g~lVlSe~~G~~--~~l---- 470 (831)
.++.+++..- .|. |.-.+|.+++..+|.-|-+.|-+-..|-|+. +.+..|.+.++...|.. +.+
T Consensus 328 d~a~~L~i~~------~v~-F~~N~Py~~lv~lL~~a~iGvh~MwNEHFGIsVVEyMAAGlIpi~h~SgGP~lDIV~~~~ 400 (465)
T KOG1387|consen 328 DLAEELKIPK------HVQ-FEKNVPYEKLVELLGKATIGVHTMWNEHFGISVVEYMAAGLIPIVHNSGGPLLDIVTPWD 400 (465)
T ss_pred HHHHhcCCcc------ceE-EEecCCHHHHHHHhccceeehhhhhhhhcchhHHHHHhcCceEEEeCCCCCceeeeeccC
Confidence 7777665321 244 4558999999999999999999888875521 22233444444443322 111
Q ss_pred --CCCceeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHhhhhccCCHHHHHHHHHHHHHH
Q 044635 471 --SGAIRVNPWNIDAVSDAMDSALEMADQEKQLRHEKHYRYVSTHDVGYWARSFLQDLER 528 (831)
Q Consensus 471 --~~allVnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l~~ 528 (831)
.+|++. | +.++-|++|.+++++..+||....+..+..+.++.-....++|...+..
T Consensus 401 G~~tGFla-~-t~~EYaE~iLkIv~~~~~~r~~~r~~AR~s~~RFsE~~F~kd~~~~i~k 458 (465)
T KOG1387|consen 401 GETTGFLA-P-TDEEYAEAILKIVKLNYDERNMMRRNARKSLARFGELKFDKDWENPICK 458 (465)
T ss_pred Cccceeec-C-ChHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHhhHHHHHHhHhHHHHH
Confidence 145665 3 5678999999999999999877767777777776666666666544443
No 147
>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family. This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.
Probab=97.95 E-value=0.00016 Score=78.17 Aligned_cols=49 Identities=24% Similarity=0.387 Sum_probs=38.9
Q ss_pred ceeEEecCCCccCCCCCCCCCCCHHHHHHHHHHhhcCCCeEEEECCCCHhhHHH
Q 044635 573 TRAILLDYDGTLMPQASIDKSPNSKTIDILNSLCRDKNNMVFLVSAKSRKTLAE 626 (831)
Q Consensus 573 ~rli~~D~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~ 626 (831)
.++|++|+||||+. .. .+.+.+.++|++|.+ .|..++++|+|+......
T Consensus 2 ~~~~~~D~DGtl~~---~~-~~~~ga~e~l~~L~~-~g~~~~~~Tnns~~~~~~ 50 (279)
T TIGR01452 2 AQGFIFDCDGVLWL---GE-RVVPGAPELLDRLAR-AGKAALFVTNNSTKSRAE 50 (279)
T ss_pred ccEEEEeCCCceEc---CC-eeCcCHHHHHHHHHH-CCCeEEEEeCCCCCCHHH
Confidence 57999999999998 33 345669999999976 599999999987554443
No 148
>TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase. Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology.
Probab=97.93 E-value=1.5e-05 Score=74.81 Aligned_cols=51 Identities=16% Similarity=0.260 Sum_probs=41.3
Q ss_pred eeEEecCCCccCCCCC---CCCCCCHHHHHHHHHHhhcCCCeEEEECCCCHhhHH
Q 044635 574 RAILLDYDGTLMPQAS---IDKSPNSKTIDILNSLCRDKNNMVFLVSAKSRKTLA 625 (831)
Q Consensus 574 rli~~D~DGTLl~~~~---~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~ 625 (831)
|+|++|+||||+.... ....+.++++++|++|.+ .|+.|+++|||+.....
T Consensus 2 K~i~~DiDGTL~~~~~~~y~~~~~~~~~ie~L~~l~~-~G~~IiiaTGR~~~~~~ 55 (126)
T TIGR01689 2 KRLVMDLDNTITLTENGDYANVAPILAVIEKLRHYKA-LGFEIVISSSRNMRTYE 55 (126)
T ss_pred CEEEEeCCCCcccCCCCcccccccCHHHHHHHHHHHH-CCCEEEEECCCCchhhh
Confidence 6999999999997321 113477999999999976 59999999999987654
No 149
>PRK13225 phosphoglycolate phosphatase; Provisional
Probab=97.90 E-value=0.00031 Score=75.61 Aligned_cols=70 Identities=19% Similarity=0.259 Sum_probs=57.2
Q ss_pred CHHHHHHHHHHHhhhcCCCcccEEEEcCCchhHHHHHHcchhcCCCCCCCCCceEEEEeCCC------CcccceEeCChh
Q 044635 739 NKGLVAKRLLSTMQEREMLPDFVLCVGDDRSDEDMFEVIISSMAGPSIAPRAEVFACTVGRK------PSKAKYYLDDTV 812 (831)
Q Consensus 739 nKG~al~~Ll~~l~~~g~~~d~vla~GD~~NDe~Mf~~a~~~~~~~~~~~~~~~~~v~vG~~------~s~A~y~l~d~~ 812 (831)
.|..++.++++++ +++++++++|||+.+|+.+-+.+|.. .++|.-|.. ...|+|++++..
T Consensus 196 ~k~~~~~~~l~~~---~~~p~~~l~IGDs~~Di~aA~~AG~~-----------~I~v~~g~~~~~~l~~~~ad~~i~~~~ 261 (273)
T PRK13225 196 SKRRALSQLVARE---GWQPAAVMYVGDETRDVEAARQVGLI-----------AVAVTWGFNDRQSLVAACPDWLLETPS 261 (273)
T ss_pred CCHHHHHHHHHHh---CcChhHEEEECCCHHHHHHHHHCCCe-----------EEEEecCCCCHHHHHHCCCCEEECCHH
Confidence 4678888998888 88999999999999999999998752 356666632 246899999999
Q ss_pred HHHHHHHHHH
Q 044635 813 EIVRLMQGLA 822 (831)
Q Consensus 813 eV~~~L~~L~ 822 (831)
++..++..|.
T Consensus 262 eL~~~~~~~~ 271 (273)
T PRK13225 262 DLLQAVTQLM 271 (273)
T ss_pred HHHHHHHHHh
Confidence 9999887764
No 150
>TIGR00215 lpxB lipid-A-disaccharide synthase. Lipid-A precursor biosynthesis producing lipid A disaccharide in a condensation reaction. transcribed as part of an operon including lpxA
Probab=97.86 E-value=0.0025 Score=72.20 Aligned_cols=140 Identities=19% Similarity=0.104 Sum_probs=82.3
Q ss_pred HHHHHhc-cCCcEEE--EeccCccc-ccCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHH
Q 044635 329 ELIKQFH-DQGKVML--LGVDDMDI-FKGISLKLLAMEQLLIQHPEWQGKVVLVQIANPARGRGKDVKEVQAETYSTVER 404 (831)
Q Consensus 329 ~lr~~~~-~~~~~ii--l~VdRld~-~KGi~~~l~A~~~lL~~~P~~~~~vvLvqig~p~r~~~~~~~~l~~~i~~lv~~ 404 (831)
+.+++++ +.++++| ++.+|..+ .|+++.+++|++.+.+++|+++ +++++.+ +... ..++++...
T Consensus 180 ~~r~~lgl~~~~~~Ilvl~GSR~aei~k~~~~ll~a~~~l~~~~p~~~----~vi~~~~----~~~~----~~~~~~~~~ 247 (385)
T TIGR00215 180 SAREKLGIDHNGETLALLPGSRGSEVEKLFPLFLKAAQLLEQQEPDLR----RVLPVVN----FKRR----LQFEQIKAE 247 (385)
T ss_pred HHHHHcCCCCCCCEEEEECCCCHHHHHHhHHHHHHHHHHHHHhCCCeE----EEEEeCC----chhH----HHHHHHHHH
Confidence 3456666 4556655 34469887 7999999999999999899865 5544422 1111 222222222
Q ss_pred HhccCCCCCCccEEEecCCCCHHHHHHHHHHcCEeEECCCc---cCCCCCCCCCceEEEe----c-------------cc
Q 044635 405 INQTFGKPGYDPVVLIDEPLKFYERIAYYVVAECCLVTAVR---DGSEPSSPKKSMLVVS----E-------------FI 464 (831)
Q Consensus 405 IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv~vvtS~~---eGma~~~~~~g~lVlS----e-------------~~ 464 (831)
. +. +. .+.++.+ +...+|++||++|++|-. |-|++ +.|+|++ - +.
T Consensus 248 ~----~~-~~-~v~~~~~-----~~~~~l~aADl~V~~SGt~tlEa~a~----G~P~Vv~yk~~pl~~~~~~~~~~~~~~ 312 (385)
T TIGR00215 248 Y----GP-DL-QLHLIDG-----DARKAMFAADAALLASGTAALEAALI----KTPMVVGYRMKPLTFLIARRLVKTDYI 312 (385)
T ss_pred h----CC-CC-cEEEECc-----hHHHHHHhCCEEeecCCHHHHHHHHc----CCCEEEEEcCCHHHHHHHHHHHcCCee
Confidence 2 21 11 3444433 456799999999999822 33344 4466666 1 22
Q ss_pred ccccccCC--C---ceeCCCCHHHHHHHHHHHhcCC
Q 044635 465 GCSPSLSG--A---IRVNPWNIDAVSDAMDSALEMA 495 (831)
Q Consensus 465 G~~~~l~~--a---llVnP~d~~~~A~ai~~aL~m~ 495 (831)
+.+..+.+ + ++-+-.+++.+++++.+.|+.+
T Consensus 313 ~~~nil~~~~~~pel~q~~~~~~~l~~~~~~ll~~~ 348 (385)
T TIGR00215 313 SLPNILANRLLVPELLQEECTPHPLAIALLLLLENG 348 (385)
T ss_pred eccHHhcCCccchhhcCCCCCHHHHHHHHHHHhcCC
Confidence 22222311 1 2223356889999999999866
No 151
>PF05693 Glycogen_syn: Glycogen synthase; InterPro: IPR008631 This family consists of the eukaryotic glycogen synthase proteins GYS1, GYS2 and GYS3. Glycogen synthase (GS) is the enzyme responsible for the synthesis of -1,4-linked glucose chains in glycogen. It is the rate limiting enzyme in the synthesis of the polysaccharide, and its activity is highly regulated through phosphorylation at multiple sites and also by allosteric effectors, mainly glucose 6-phosphate (G6P) [].; GO: 0004373 glycogen (starch) synthase activity, 0005978 glycogen biosynthetic process; PDB: 3NB0_C 3RT1_C 3RSZ_D 3O3C_B 3NAZ_B 3NCH_D.
Probab=97.86 E-value=0.0019 Score=74.65 Aligned_cols=105 Identities=9% Similarity=0.091 Sum_probs=54.5
Q ss_pred cEEEecCCCC------HHHHHHHHHHcCEeEECCCccCCCC---C-CCCCceEEEeccccccccc--------CCCcee-
Q 044635 416 PVVLIDEPLK------FYERIAYYVVAECCLVTAVRDGSEP---S-SPKKSMLVVSEFIGCSPSL--------SGAIRV- 476 (831)
Q Consensus 416 pv~~~~~~v~------~~el~aly~~ADv~vvtS~~eGma~---~-~~~~g~lVlSe~~G~~~~l--------~~allV- 476 (831)
.|+|....++ .-++..+.+.+|++|+||.+|.++- + ..-+.|-|.|..+|...-+ ..|+.|
T Consensus 444 KVIF~P~yL~~~dgif~l~Y~dfv~GcdLgvFPSYYEPWGYTPlE~~a~gVPsITTnLsGFG~~~~~~~~~~~~~GV~Vv 523 (633)
T PF05693_consen 444 KVIFHPEYLSGTDGIFNLDYYDFVRGCDLGVFPSYYEPWGYTPLECTAFGVPSITTNLSGFGCWMQEHIEDPEEYGVYVV 523 (633)
T ss_dssp EEEE--S---TTSSSS-S-HHHHHHHSSEEEE--SSBSS-HHHHHHHHTT--EEEETTBHHHHHHHTTS-HHGGGTEEEE
T ss_pred EEEEeeccccCCCCCCCCCHHHHhccCceeeeccccccccCChHHHhhcCCceeeccchhHHHHHHHhhccCcCCcEEEE
Confidence 5666544333 3367888999999999999998721 0 1125588889888865333 235554
Q ss_pred CC--CCH----HHHHHHHHHHhcCCHHHHHHHHHHHhhhhccCCHHHHHH
Q 044635 477 NP--WNI----DAVSDAMDSALEMADQEKQLRHEKHYRYVSTHDVGYWAR 520 (831)
Q Consensus 477 nP--~d~----~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~ 520 (831)
+= .+. +++|+.|.....++..+|.....+..+.-..-+|.+...
T Consensus 524 dR~~~n~~e~v~~la~~l~~f~~~~~rqri~~Rn~ae~LS~~~dW~~~~~ 573 (633)
T PF05693_consen 524 DRRDKNYDESVNQLADFLYKFCQLSRRQRIIQRNRAERLSDLADWKNFGK 573 (633)
T ss_dssp -SSSS-HHHHHHHHHHHHHHHHT--HHHHHHHHHHHHHHGGGGBHHHHCH
T ss_pred eCCCCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhCCHHHHHH
Confidence 32 233 566777777778887766554444433333344444433
No 152
>TIGR01684 viral_ppase viral phosphatase. These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade.
Probab=97.75 E-value=5.3e-05 Score=80.43 Aligned_cols=72 Identities=18% Similarity=0.262 Sum_probs=56.4
Q ss_pred CceeEEecCCCccCCCCCCCCCC---CHHHHHHHHHHhhcCCCeEEEECCCCHhhHHHHhCCC--CC-ceEEecCCEEEE
Q 044635 572 TTRAILLDYDGTLMPQASIDKSP---NSKTIDILNSLCRDKNNMVFLVSAKSRKTLAEWFSPC--EN-LGIAAEHGYFFR 645 (831)
Q Consensus 572 ~~rli~~D~DGTLl~~~~~~~~~---s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~~--~~-~~liaenGa~i~ 645 (831)
..++|+||+||||++ ..+.+ ++.+.++|.+|.+ .|..++|+|++++..+...++.+ .. ...|..+|....
T Consensus 125 ~~kvIvFDLDgTLi~---~~~~v~irdPgV~EaL~~Lke-kGikLaIaTS~~Re~v~~~L~~lGLd~YFdvIIs~Gdv~~ 200 (301)
T TIGR01684 125 PPHVVVFDLDSTLIT---DEEPVRIRDPRIYDSLTELKK-RGCILVLWSYGDRDHVVESMRKVKLDRYFDIIISGGHKAE 200 (301)
T ss_pred cceEEEEecCCCCcC---CCCccccCCHHHHHHHHHHHH-CCCEEEEEECCCHHHHHHHHHHcCCCcccCEEEECCcccc
Confidence 467999999999999 44443 6999999999987 59999999999999888877765 22 236667777655
Q ss_pred eC
Q 044635 646 LR 647 (831)
Q Consensus 646 ~~ 647 (831)
..
T Consensus 201 ~k 202 (301)
T TIGR01684 201 EY 202 (301)
T ss_pred CC
Confidence 43
No 153
>PLN02645 phosphoglycolate phosphatase
Probab=97.71 E-value=0.0013 Score=72.38 Aligned_cols=53 Identities=19% Similarity=0.256 Sum_probs=43.2
Q ss_pred CceeEEecCCCccCCCCCCCCCCCHHHHHHHHHHhhcCCCeEEEECCCCHhhHHHHhC
Q 044635 572 TTRAILLDYDGTLMPQASIDKSPNSKTIDILNSLCRDKNNMVFLVSAKSRKTLAEWFS 629 (831)
Q Consensus 572 ~~rli~~D~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~ 629 (831)
+.++|+||+||||+. .+ .+-+.+.++|++|.+ .|..++++|+|+......++.
T Consensus 27 ~~~~~~~D~DGtl~~---~~-~~~~ga~e~l~~lr~-~g~~~~~~TN~~~~~~~~~~~ 79 (311)
T PLN02645 27 SVETFIFDCDGVIWK---GD-KLIEGVPETLDMLRS-MGKKLVFVTNNSTKSRAQYGK 79 (311)
T ss_pred hCCEEEEeCcCCeEe---CC-ccCcCHHHHHHHHHH-CCCEEEEEeCCCCCCHHHHHH
Confidence 478999999999998 34 456888999999977 599999999999665555543
No 154
>COG0546 Gph Predicted phosphatases [General function prediction only]
Probab=97.67 E-value=0.00031 Score=73.13 Aligned_cols=66 Identities=21% Similarity=0.195 Sum_probs=52.4
Q ss_pred HHHHHHHHHHhhhcCCCcccEEEEcCCchhHHHHHHcchhcCCCCCCCCCceEEEEeCCC------CcccceEeCChhHH
Q 044635 741 GLVAKRLLSTMQEREMLPDFVLCVGDDRSDEDMFEVIISSMAGPSIAPRAEVFACTVGRK------PSKAKYYLDDTVEI 814 (831)
Q Consensus 741 G~al~~Ll~~l~~~g~~~d~vla~GD~~NDe~Mf~~a~~~~~~~~~~~~~~~~~v~vG~~------~s~A~y~l~d~~eV 814 (831)
-..+..+++.+ |.++++++++||+.+|+.|-+.+|-. .++|+.|.. ...|++++++..++
T Consensus 148 P~~l~~~~~~~---~~~~~~~l~VGDs~~Di~aA~~Ag~~-----------~v~v~~g~~~~~~l~~~~~d~vi~~~~el 213 (220)
T COG0546 148 PEPLLLLLEKL---GLDPEEALMVGDSLNDILAAKAAGVP-----------AVGVTWGYNSREELAQAGADVVIDSLAEL 213 (220)
T ss_pred HHHHHHHHHHh---CCChhheEEECCCHHHHHHHHHcCCC-----------EEEEECCCCCCcchhhcCCCEEECCHHHH
Confidence 35566777776 77778999999999999999999832 367888752 35799999999999
Q ss_pred HHHHHH
Q 044635 815 VRLMQG 820 (831)
Q Consensus 815 ~~~L~~ 820 (831)
...|..
T Consensus 214 ~~~l~~ 219 (220)
T COG0546 214 LALLAE 219 (220)
T ss_pred HHHHhc
Confidence 887753
No 155
>PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed
Probab=97.65 E-value=0.00071 Score=70.33 Aligned_cols=73 Identities=16% Similarity=0.142 Sum_probs=48.0
Q ss_pred CCCHHHHHHHHHHHhhhcCCCcccEEEEcCCchhHHHHHHcchhcCCCCCCCCCceEEEEeCCCCcccceEeCChhHHHH
Q 044635 737 GVNKGLVAKRLLSTMQEREMLPDFVLCVGDDRSDEDMFEVIISSMAGPSIAPRAEVFACTVGRKPSKAKYYLDDTVEIVR 816 (831)
Q Consensus 737 gvnKG~al~~Ll~~l~~~g~~~d~vla~GD~~NDe~Mf~~a~~~~~~~~~~~~~~~~~v~vG~~~s~A~y~l~d~~eV~~ 816 (831)
+..|..+++.+ +..++.+++|||+.||+.|.+.++..++...+ ...-.....+.+..++-.+|.+
T Consensus 146 ~~~K~~~l~~~-------~~~~~~~i~iGDs~~Di~aa~~Ag~~~a~~~l--------~~~~~~~~~~~~~~~~f~ei~~ 210 (219)
T PRK09552 146 GCCKPSLIRKL-------SDTNDFHIVIGDSITDLEAAKQADKVFARDFL--------ITKCEELGIPYTPFETFHDVQT 210 (219)
T ss_pred CCchHHHHHHh-------ccCCCCEEEEeCCHHHHHHHHHCCcceeHHHH--------HHHHHHcCCCccccCCHHHHHH
Confidence 34588776654 56678999999999999999988753211000 0000012345556789999999
Q ss_pred HHHHHHhh
Q 044635 817 LMQGLACV 824 (831)
Q Consensus 817 ~L~~L~~~ 824 (831)
.|+.+.++
T Consensus 211 ~l~~~~~~ 218 (219)
T PRK09552 211 ELKHLLEV 218 (219)
T ss_pred HHHHHhcc
Confidence 99887653
No 156
>PRK13223 phosphoglycolate phosphatase; Provisional
Probab=97.62 E-value=0.00061 Score=73.37 Aligned_cols=71 Identities=20% Similarity=0.158 Sum_probs=55.9
Q ss_pred eCCCCHHHHHHHHHHHhhhcCCCcccEEEEcCCchhHHHHHHcchhcCCCCCCCCCceEEEEeCCC------CcccceEe
Q 044635 735 PQGVNKGLVAKRLLSTMQEREMLPDFVLCVGDDRSDEDMFEVIISSMAGPSIAPRAEVFACTVGRK------PSKAKYYL 808 (831)
Q Consensus 735 p~gvnKG~al~~Ll~~l~~~g~~~d~vla~GD~~NDe~Mf~~a~~~~~~~~~~~~~~~~~v~vG~~------~s~A~y~l 808 (831)
+.+-.|...++.+++.+ |++++.+++|||+.+|+.|.+.+|.. .++|+.|.. ...|.+.+
T Consensus 154 ~~~Kp~p~~~~~~~~~~---g~~~~~~l~IGD~~~Di~aA~~aGi~-----------~i~v~~G~~~~~~l~~~~~~~vi 219 (272)
T PRK13223 154 PQKKPDPAALLFVMKMA---GVPPSQSLFVGDSRSDVLAAKAAGVQ-----------CVALSYGYNHGRPIAEESPALVI 219 (272)
T ss_pred CCCCCCcHHHHHHHHHh---CCChhHEEEECCCHHHHHHHHHCCCe-----------EEEEecCCCCchhhhhcCCCEEE
Confidence 44555677899999988 89999999999999999999998742 356666631 24688999
Q ss_pred CChhHHHHHHH
Q 044635 809 DDTVEIVRLMQ 819 (831)
Q Consensus 809 ~d~~eV~~~L~ 819 (831)
++..++..++.
T Consensus 220 ~~l~el~~~~~ 230 (272)
T PRK13223 220 DDLRALLPGCA 230 (272)
T ss_pred CCHHHHHHHHh
Confidence 99999887655
No 157
>PRK13288 pyrophosphatase PpaX; Provisional
Probab=97.56 E-value=0.00026 Score=73.19 Aligned_cols=70 Identities=16% Similarity=0.138 Sum_probs=55.1
Q ss_pred CCCHHHHHHHHHHHhhhcCCCcccEEEEcCCchhHHHHHHcchhcCCCCCCCCCceEEEEeCCC------CcccceEeCC
Q 044635 737 GVNKGLVAKRLLSTMQEREMLPDFVLCVGDDRSDEDMFEVIISSMAGPSIAPRAEVFACTVGRK------PSKAKYYLDD 810 (831)
Q Consensus 737 gvnKG~al~~Ll~~l~~~g~~~d~vla~GD~~NDe~Mf~~a~~~~~~~~~~~~~~~~~v~vG~~------~s~A~y~l~d 810 (831)
+--|...++++++++ +.+++.+++|||+.+|+.+-+.+|.. .++|+-|.. ...|+|.+++
T Consensus 137 ~Kp~p~~~~~~~~~~---~~~~~~~~~iGDs~~Di~aa~~aG~~-----------~i~v~~g~~~~~~l~~~~~~~~i~~ 202 (214)
T PRK13288 137 AKPDPEPVLKALELL---GAKPEEALMVGDNHHDILAGKNAGTK-----------TAGVAWTIKGREYLEQYKPDFMLDK 202 (214)
T ss_pred CCCCcHHHHHHHHHc---CCCHHHEEEECCCHHHHHHHHHCCCe-----------EEEEcCCCCCHHHHhhcCcCEEECC
Confidence 334678889999988 88999999999999999999999852 345555532 2358899999
Q ss_pred hhHHHHHHHH
Q 044635 811 TVEIVRLMQG 820 (831)
Q Consensus 811 ~~eV~~~L~~ 820 (831)
..++.+++..
T Consensus 203 ~~~l~~~i~~ 212 (214)
T PRK13288 203 MSDLLAIVGD 212 (214)
T ss_pred HHHHHHHHhh
Confidence 9999887754
No 158
>PRK06769 hypothetical protein; Validated
Probab=97.46 E-value=0.0011 Score=66.43 Aligned_cols=49 Identities=22% Similarity=0.213 Sum_probs=37.9
Q ss_pred cCceeEEecCCCccCCCCC----CCCCCCHHHHHHHHHHhhcCCCeEEEECCCC
Q 044635 571 TTTRAILLDYDGTLMPQAS----IDKSPNSKTIDILNSLCRDKNNMVFLVSAKS 620 (831)
Q Consensus 571 s~~rli~~D~DGTLl~~~~----~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~ 620 (831)
+.+|+|++|.||||..+.. ..-.+-+.+.++|++|.+ .|..++|+|+.+
T Consensus 2 ~~~~~~~~d~d~~~~~~~~~~~~~~~~~~pgv~e~L~~Lk~-~G~~l~I~Tn~~ 54 (173)
T PRK06769 2 TNIQAIFIDRDGTIGGDTTIHYPGSFTLFPFTKASLQKLKA-NHIKIFSFTNQP 54 (173)
T ss_pred CCCcEEEEeCCCcccCCCCCCCHHHeEECCCHHHHHHHHHH-CCCEEEEEECCc
Confidence 4689999999999976432 112345889999999976 589999998765
No 159
>PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated
Probab=97.44 E-value=0.0015 Score=65.81 Aligned_cols=65 Identities=12% Similarity=0.096 Sum_probs=48.2
Q ss_pred HHHHHHHHHHhhhcCCCcccEEEEcCCchhHHHHHHcchhcCCCCCCCCCceEEEEeCCC-----Cccc--ceEeCChhH
Q 044635 741 GLVAKRLLSTMQEREMLPDFVLCVGDDRSDEDMFEVIISSMAGPSIAPRAEVFACTVGRK-----PSKA--KYYLDDTVE 813 (831)
Q Consensus 741 G~al~~Ll~~l~~~g~~~d~vla~GD~~NDe~Mf~~a~~~~~~~~~~~~~~~~~v~vG~~-----~s~A--~y~l~d~~e 813 (831)
-.....+++.+ |.+++++++|||+.+|+.+-+.+|.. ++.+.-|.. ...| ++++++..+
T Consensus 106 p~~~~~~~~~l---~~~~~~~~~VgDs~~Di~~A~~aG~~-----------~i~v~~g~~~~~~~~~~~~~~~ii~~l~e 171 (181)
T PRK08942 106 PGMLLSIAERL---NIDLAGSPMVGDSLRDLQAAAAAGVT-----------PVLVRTGKGVTTLAEGAAPGTWVLDSLAD 171 (181)
T ss_pred HHHHHHHHHHc---CCChhhEEEEeCCHHHHHHHHHCCCe-----------EEEEcCCCCchhhhcccCCCceeecCHHH
Confidence 34566677777 88999999999999999999999852 245554532 2345 788888888
Q ss_pred HHHHHH
Q 044635 814 IVRLMQ 819 (831)
Q Consensus 814 V~~~L~ 819 (831)
+.++|.
T Consensus 172 l~~~l~ 177 (181)
T PRK08942 172 LPQALK 177 (181)
T ss_pred HHHHHH
Confidence 887765
No 160
>PHA03398 viral phosphatase superfamily protein; Provisional
Probab=97.38 E-value=0.00034 Score=74.49 Aligned_cols=72 Identities=19% Similarity=0.208 Sum_probs=54.8
Q ss_pred CceeEEecCCCccCCCCCCCCCC---CHHHHHHHHHHhhcCCCeEEEECCCCHhhHHHHhCCC--CC-ceEEecCCEEEE
Q 044635 572 TTRAILLDYDGTLMPQASIDKSP---NSKTIDILNSLCRDKNNMVFLVSAKSRKTLAEWFSPC--EN-LGIAAEHGYFFR 645 (831)
Q Consensus 572 ~~rli~~D~DGTLl~~~~~~~~~---s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~~--~~-~~liaenGa~i~ 645 (831)
..++|++|+||||++ ..+.+ ++.+.++|.+|.+ .|..++|+|+.+...+...++.+ .. ...|..+|....
T Consensus 127 ~~~~i~~D~D~TL~~---~~~~v~irdp~V~EtL~eLke-kGikLaIvTNg~Re~v~~~Le~lgL~~yFDvII~~g~i~~ 202 (303)
T PHA03398 127 IPHVIVFDLDSTLIT---DEEPVRIRDPFVYDSLDELKE-RGCVLVLWSYGNREHVVHSLKETKLEGYFDIIICGGRKAG 202 (303)
T ss_pred eccEEEEecCCCccC---CCCccccCChhHHHHHHHHHH-CCCEEEEEcCCChHHHHHHHHHcCCCccccEEEECCCccc
Confidence 468999999999999 55555 7999999999987 69999999988888777777654 22 224555666554
Q ss_pred eC
Q 044635 646 LR 647 (831)
Q Consensus 646 ~~ 647 (831)
..
T Consensus 203 k~ 204 (303)
T PHA03398 203 EY 204 (303)
T ss_pred cc
Confidence 43
No 161
>TIGR02919 accessory Sec system glycosyltransferase GtfB. Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus.
Probab=97.21 E-value=0.0031 Score=72.24 Aligned_cols=118 Identities=13% Similarity=0.169 Sum_probs=88.1
Q ss_pred HHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhccCCCCCCccEEEecCCCCHHHHHHHHH
Q 044635 355 SLKLLAMEQLLIQHPEWQGKVVLVQIANPARGRGKDVKEVQAETYSTVERINQTFGKPGYDPVVLIDEPLKFYERIAYYV 434 (831)
Q Consensus 355 ~~~l~A~~~lL~~~P~~~~~vvLvqig~p~r~~~~~~~~l~~~i~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~ 434 (831)
...|+|++.+.++.|++. |=+ |.++ ++..++.++ .+ | ..++.+.+ +....+..+|.
T Consensus 291 s~~I~~i~~Lv~~lPd~~----f~I-ga~t--------e~s~kL~~L-~~----y-----~nvvly~~-~~~~~l~~ly~ 346 (438)
T TIGR02919 291 SDQIEHLEEIVQALPDYH----FHI-AALT--------EMSSKLMSL-DK----Y-----DNVKLYPN-ITTQKIQELYQ 346 (438)
T ss_pred HHHHHHHHHHHHhCCCcE----EEE-EecC--------cccHHHHHH-Hh----c-----CCcEEECC-cChHHHHHHHH
Confidence 899999999999999987 554 6443 112344444 22 2 35777665 44567999999
Q ss_pred HcCEeEECCCccCCCC---CCCCCceEEEe--cccccccccCCCceeCCCCHHHHHHHHHHHhcCCH
Q 044635 435 VAECCLVTAVRDGSEP---SSPKKSMLVVS--EFIGCSPSLSGAIRVNPWNIDAVSDAMDSALEMAD 496 (831)
Q Consensus 435 ~ADv~vvtS~~eGma~---~~~~~g~lVlS--e~~G~~~~l~~allVnP~d~~~~A~ai~~aL~m~~ 496 (831)
.||+++.+|..||+.. ++...|.+|+| ...|..+.+.++.+|++.|+++++++|.++|+.+.
T Consensus 347 ~~dlyLdin~~e~~~~al~eA~~~G~pI~afd~t~~~~~~i~~g~l~~~~~~~~m~~~i~~lL~d~~ 413 (438)
T TIGR02919 347 TCDIYLDINHGNEILNAVRRAFEYNLLILGFEETAHNRDFIASENIFEHNEVDQLISKLKDLLNDPN 413 (438)
T ss_pred hccEEEEccccccHHHHHHHHHHcCCcEEEEecccCCcccccCCceecCCCHHHHHHHHHHHhcCHH
Confidence 9999999999999821 34556778877 44455556667999999999999999999998774
No 162
>PRK10826 2-deoxyglucose-6-phosphatase; Provisional
Probab=97.02 E-value=0.0026 Score=66.09 Aligned_cols=63 Identities=10% Similarity=-0.025 Sum_probs=46.3
Q ss_pred CHHHHHHHHHHHhhhcCCCcccEEEEcCCchhHHHHHHcchhcCCCCCCCCCceEEEEeCCC-----CcccceEeCChhH
Q 044635 739 NKGLVAKRLLSTMQEREMLPDFVLCVGDDRSDEDMFEVIISSMAGPSIAPRAEVFACTVGRK-----PSKAKYYLDDTVE 813 (831)
Q Consensus 739 nKG~al~~Ll~~l~~~g~~~d~vla~GD~~NDe~Mf~~a~~~~~~~~~~~~~~~~~v~vG~~-----~s~A~y~l~d~~e 813 (831)
.+....+.+++.+ |++++++++|||+.+|+++-+.+|.. .+.+.-+.. ...|.+++.+.++
T Consensus 149 p~~~~~~~~~~~~---~~~~~~~~~igDs~~Di~aA~~aG~~-----------~i~v~~~~~~~~~~~~~~~~~~~~~~d 214 (222)
T PRK10826 149 PHPEVYLNCAAKL---GVDPLTCVALEDSFNGMIAAKAARMR-----------SIVVPAPEQQNDPRWALADVKLESLTE 214 (222)
T ss_pred CCHHHHHHHHHHc---CCCHHHeEEEcCChhhHHHHHHcCCE-----------EEEecCCccCchhhhhhhheeccCHHH
Confidence 3556888899988 99999999999999999999999852 133332321 1257777777777
Q ss_pred HH
Q 044635 814 IV 815 (831)
Q Consensus 814 V~ 815 (831)
+.
T Consensus 215 l~ 216 (222)
T PRK10826 215 LT 216 (222)
T ss_pred Hh
Confidence 54
No 163
>TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase. Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX.
Probab=96.97 E-value=0.015 Score=60.26 Aligned_cols=72 Identities=13% Similarity=0.139 Sum_probs=45.8
Q ss_pred CCCHHHHHHHHHHHhhhcCCCcccEEEEcCCchhHHHHHHcchhcCCCCCCCCCceEEEEeCCCCcccceEeCChhHHHH
Q 044635 737 GVNKGLVAKRLLSTMQEREMLPDFVLCVGDDRSDEDMFEVIISSMAGPSIAPRAEVFACTVGRKPSKAKYYLDDTVEIVR 816 (831)
Q Consensus 737 gvnKG~al~~Ll~~l~~~g~~~d~vla~GD~~NDe~Mf~~a~~~~~~~~~~~~~~~~~v~vG~~~s~A~y~l~d~~eV~~ 816 (831)
|..|..+++.+. ..++.++++||+.||+.|.+.++..++...+- ..-.....+-+..++-.+|.+
T Consensus 142 g~~K~~~l~~~~-------~~~~~~i~iGDg~~D~~~a~~Ad~~~ar~~l~--------~~~~~~~~~~~~~~~f~di~~ 206 (214)
T TIGR03333 142 GCCKPSLIRKLS-------EPNDYHIVIGDSVTDVEAAKQSDLCFARDYLL--------NECEELGLNHAPFQDFYDVRK 206 (214)
T ss_pred CCCHHHHHHHHh-------hcCCcEEEEeCCHHHHHHHHhCCeeEehHHHH--------HHHHHcCCCccCcCCHHHHHH
Confidence 356888887663 24678999999999999999987543321100 000112223334578899998
Q ss_pred HHHHHHh
Q 044635 817 LMQGLAC 823 (831)
Q Consensus 817 ~L~~L~~ 823 (831)
.|++..+
T Consensus 207 ~l~~~~~ 213 (214)
T TIGR03333 207 ELENVKE 213 (214)
T ss_pred HHHHHhc
Confidence 8886543
No 164
>TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase. This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812).
Probab=96.94 E-value=0.0062 Score=60.99 Aligned_cols=62 Identities=11% Similarity=0.049 Sum_probs=45.2
Q ss_pred HHHHHHHHHHhhhcCCCcccEEEEcCCchhHHHHHHcchhcCCCCCCCCCceEEEEeCCC-----CcccceEeCChhHHH
Q 044635 741 GLVAKRLLSTMQEREMLPDFVLCVGDDRSDEDMFEVIISSMAGPSIAPRAEVFACTVGRK-----PSKAKYYLDDTVEIV 815 (831)
Q Consensus 741 G~al~~Ll~~l~~~g~~~d~vla~GD~~NDe~Mf~~a~~~~~~~~~~~~~~~~~v~vG~~-----~s~A~y~l~d~~eV~ 815 (831)
-..+...++++ |++++++++|||+.+|+..=+.+|.. .++.|.-|.. ...|++++++..++.
T Consensus 109 p~~~~~a~~~~---~~~~~~~v~VGDs~~Di~aA~~aG~~----------~~i~v~~g~~~~~~~~~~ad~~i~~~~el~ 175 (176)
T TIGR00213 109 PGMLLQARKEL---HIDMAQSYMVGDKLEDMQAGVAAKVK----------TNVLVRTGKPITPEAENIADWVLNSLADLP 175 (176)
T ss_pred HHHHHHHHHHc---CcChhhEEEEcCCHHHHHHHHHCCCc----------EEEEEecCCcccccccccCCEEeccHHHhh
Confidence 44556677776 89999999999999999999998752 1134555642 134888998888764
No 165
>TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase. This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512.
Probab=96.89 E-value=0.0045 Score=73.61 Aligned_cols=65 Identities=9% Similarity=0.178 Sum_probs=52.0
Q ss_pred HHHHhcCceeEEecCCCccCCCCCCCCCCCHHHHHHHHHHhhcCC-CeEEEECCCCHhhHHHHhCCC
Q 044635 566 SAYKRTTTRAILLDYDGTLMPQASIDKSPNSKTIDILNSLCRDKN-NMVFLVSAKSRKTLAEWFSPC 631 (831)
Q Consensus 566 ~~y~~s~~rli~~D~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g-~~V~I~SGR~~~~l~~~~~~~ 631 (831)
..+.....+.+++..||+++..-.....+-+.+.++|+.|.+ .| ..++++||.+....+...+.+
T Consensus 357 ~~~~~~g~~~~~v~~~~~~~g~i~~~d~~~~g~~e~l~~L~~-~g~i~v~ivTgd~~~~a~~i~~~l 422 (556)
T TIGR01525 357 NEGESQGKTVVFVAVDGELLGVIALRDQLRPEAKEAIAALKR-AGGIKLVMLTGDNRSAAEAVAAEL 422 (556)
T ss_pred HHHhhCCcEEEEEEECCEEEEEEEecccchHhHHHHHHHHHH-cCCCeEEEEeCCCHHHHHHHHHHh
Confidence 345556678899999998886332356688999999999976 48 999999999999988888654
No 166
>COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only]
Probab=96.86 E-value=0.00068 Score=64.76 Aligned_cols=68 Identities=22% Similarity=0.241 Sum_probs=52.3
Q ss_pred CHHHHHHHHHHHhhhcCCCcccEEEEcCCchhHHHHHHcchhcCCCCCCCCCceEEEEeCCC----CcccceEeC---Ch
Q 044635 739 NKGLVAKRLLSTMQEREMLPDFVLCVGDDRSDEDMFEVIISSMAGPSIAPRAEVFACTVGRK----PSKAKYYLD---DT 811 (831)
Q Consensus 739 nKG~al~~Ll~~l~~~g~~~d~vla~GD~~NDe~Mf~~a~~~~~~~~~~~~~~~~~v~vG~~----~s~A~y~l~---d~ 811 (831)
+|-.+.+.|++++ ++.++++.++|||.||+++|+.+|.+ +++-++ .+.|.|++. ..
T Consensus 83 dK~~a~~~L~~~~---~l~~e~~ayiGDD~~Dlpvm~~vGls--------------~a~~dAh~~v~~~a~~Vt~~~GG~ 145 (170)
T COG1778 83 DKLAAFEELLKKL---NLDPEEVAYVGDDLVDLPVMEKVGLS--------------VAVADAHPLLKQRADYVTSKKGGE 145 (170)
T ss_pred hHHHHHHHHHHHh---CCCHHHhhhhcCccccHHHHHHcCCc--------------ccccccCHHHHHhhHhhhhccCcc
Confidence 6999999999998 99999999999999999999999965 333333 467888874 34
Q ss_pred hHHHHHHHHHHh
Q 044635 812 VEIVRLMQGLAC 823 (831)
Q Consensus 812 ~eV~~~L~~L~~ 823 (831)
..|.++.+-+..
T Consensus 146 GAvREv~dlil~ 157 (170)
T COG1778 146 GAVREVCDLILQ 157 (170)
T ss_pred hHHHHHHHHHHH
Confidence 455555554443
No 167
>PRK10671 copA copper exporting ATPase; Provisional
Probab=96.83 E-value=0.0065 Score=75.76 Aligned_cols=138 Identities=20% Similarity=0.220 Sum_probs=96.4
Q ss_pred HHHHHhcCceeEEecCCCccCCCCCCCCCCCHHHHHHHHHHhhcCCCeEEEECCCCHhhHHHHhCCCCCceEEecCCEEE
Q 044635 565 VSAYKRTTTRAILLDYDGTLMPQASIDKSPNSKTIDILNSLCRDKNNMVFLVSAKSRKTLAEWFSPCENLGIAAEHGYFF 644 (831)
Q Consensus 565 ~~~y~~s~~rli~~D~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~~~~~~liaenGa~i 644 (831)
...+.....+.+++-.||+++..-.....+-+.+.++|++|.+ .|..++++||.+....+...+.+. +-
T Consensus 622 ~~~~~~~g~~~v~va~~~~~~g~~~l~d~~r~~a~~~i~~L~~-~gi~v~~~Tgd~~~~a~~ia~~lg---i~------- 690 (834)
T PRK10671 622 ITAQASQGATPVLLAVDGKAAALLAIRDPLRSDSVAALQRLHK-AGYRLVMLTGDNPTTANAIAKEAG---ID------- 690 (834)
T ss_pred HHHHHhCCCeEEEEEECCEEEEEEEccCcchhhHHHHHHHHHH-CCCeEEEEcCCCHHHHHHHHHHcC---CC-------
Confidence 4445556678888888998774211344566888899999976 599999999999998888776431 10
Q ss_pred EeCCCceEEEcCCcCCccHHHHHHHHHHHHhccCCCeeEeeccceEEEeeccCCCccchHHHHHHHHHHHhHhcCCCeEE
Q 044635 645 RLRRDEEWETCIPVADCGWKQIAEPVMKLYTETTDGSTIEDKETALVWSYEDADPDFGSCQAKELLDHLESVLANEPVTV 724 (831)
Q Consensus 645 ~~~~~~~w~~~~~~~~~~w~~~v~~il~~~~e~~~gs~ie~k~~~l~~~~~~~d~~~~~~~a~el~~~L~~~l~~~~v~v 724 (831)
. .+.
T Consensus 691 ------~-----------------------------------------~~~----------------------------- 694 (834)
T PRK10671 691 ------E-----------------------------------------VIA----------------------------- 694 (834)
T ss_pred ------E-----------------------------------------EEe-----------------------------
Confidence 0 000
Q ss_pred EEcCeEEEEEeCCCCHHHHHHHHHHHhhhcCCCcccEEEEcCCchhHHHHHHcchhcCCCCCCCCCceEEEEeCCC----
Q 044635 725 KSGQNLVEVKPQGVNKGLVAKRLLSTMQEREMLPDFVLCVGDDRSDEDMFEVIISSMAGPSIAPRAEVFACTVGRK---- 800 (831)
Q Consensus 725 ~~g~~~vEV~p~gvnKG~al~~Ll~~l~~~g~~~d~vla~GD~~NDe~Mf~~a~~~~~~~~~~~~~~~~~v~vG~~---- 800 (831)
++.|. .|..+++.+.. ..+.++++||+.||.+|++.++ ++|++|+.
T Consensus 695 -------~~~p~--~K~~~i~~l~~-------~~~~v~~vGDg~nD~~al~~Ag--------------vgia~g~g~~~a 744 (834)
T PRK10671 695 -------GVLPD--GKAEAIKRLQS-------QGRQVAMVGDGINDAPALAQAD--------------VGIAMGGGSDVA 744 (834)
T ss_pred -------CCCHH--HHHHHHHHHhh-------cCCEEEEEeCCHHHHHHHHhCC--------------eeEEecCCCHHH
Confidence 01122 36666666532 3567999999999999999997 57889875
Q ss_pred CcccceEe--CChhHHHHHHH
Q 044635 801 PSKAKYYL--DDTVEIVRLMQ 819 (831)
Q Consensus 801 ~s~A~y~l--~d~~eV~~~L~ 819 (831)
...|++.+ ++..++..+++
T Consensus 745 ~~~ad~vl~~~~~~~i~~~i~ 765 (834)
T PRK10671 745 IETAAITLMRHSLMGVADALA 765 (834)
T ss_pred HHhCCEEEecCCHHHHHHHHH
Confidence 34566765 67888888886
No 168
>PLN02770 haloacid dehalogenase-like hydrolase family protein
Probab=96.79 E-value=0.0087 Score=63.50 Aligned_cols=70 Identities=13% Similarity=0.078 Sum_probs=50.8
Q ss_pred HHHHHHHHHHHhhhcCCCcccEEEEcCCchhHHHHHHcchhcCCCCCCCCCceEEEEeCCC-----CcccceEeCChhH-
Q 044635 740 KGLVAKRLLSTMQEREMLPDFVLCVGDDRSDEDMFEVIISSMAGPSIAPRAEVFACTVGRK-----PSKAKYYLDDTVE- 813 (831)
Q Consensus 740 KG~al~~Ll~~l~~~g~~~d~vla~GD~~NDe~Mf~~a~~~~~~~~~~~~~~~~~v~vG~~-----~s~A~y~l~d~~e- 813 (831)
+.....+.++++ |.+++++++|||+.+|+..=+.+|.. .++|.-|.. ...|++++++..+
T Consensus 166 ~p~~~~~a~~~~---~~~~~~~l~vgDs~~Di~aA~~aGi~-----------~i~v~~g~~~~~l~~~~a~~vi~~~~e~ 231 (248)
T PLN02770 166 HPDPYLKALEVL---KVSKDHTFVFEDSVSGIKAGVAAGMP-----------VVGLTTRNPESLLMEAKPTFLIKDYEDP 231 (248)
T ss_pred ChHHHHHHHHHh---CCChhHEEEEcCCHHHHHHHHHCCCE-----------EEEEeCCCCHHHHhhcCCCEEeccchhh
Confidence 346677888887 89999999999999999999988742 345555532 3468899998887
Q ss_pred -HHHHHHHHHh
Q 044635 814 -IVRLMQGLAC 823 (831)
Q Consensus 814 -V~~~L~~L~~ 823 (831)
+...|+.+.+
T Consensus 232 ~~~~~~~~~~~ 242 (248)
T PLN02770 232 KLWAALEELDQ 242 (248)
T ss_pred HHHHHHhhccc
Confidence 4444444443
No 169
>PLN02779 haloacid dehalogenase-like hydrolase family protein
Probab=96.78 E-value=0.0069 Score=65.71 Aligned_cols=61 Identities=11% Similarity=-0.039 Sum_probs=46.8
Q ss_pred HHHHHHHHHHhhhcCCCcccEEEEcCCchhHHHHHHcchhcCCCCCCCCCceEEEEeCCC----CcccceEeCChhHHH
Q 044635 741 GLVAKRLLSTMQEREMLPDFVLCVGDDRSDEDMFEVIISSMAGPSIAPRAEVFACTVGRK----PSKAKYYLDDTVEIV 815 (831)
Q Consensus 741 G~al~~Ll~~l~~~g~~~d~vla~GD~~NDe~Mf~~a~~~~~~~~~~~~~~~~~v~vG~~----~s~A~y~l~d~~eV~ 815 (831)
......+++.+ |.+++.+++|||+.+|+.+-+.+|.. +++|.-|.. -..|++++++..++.
T Consensus 205 p~~~~~a~~~~---~~~p~~~l~IGDs~~Di~aA~~aG~~-----------~i~v~~g~~~~~~l~~ad~vi~~~~~l~ 269 (286)
T PLN02779 205 PDIYNLAAETL---GVDPSRCVVVEDSVIGLQAAKAAGMR-----------CIVTKSSYTADEDFSGADAVFDCLGDVP 269 (286)
T ss_pred HHHHHHHHHHh---CcChHHEEEEeCCHHhHHHHHHcCCE-----------EEEEccCCccccccCCCcEEECChhhcc
Confidence 55778888888 89999999999999999999999852 345544532 135888888877754
No 170
>TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC. No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC.
Probab=96.76 E-value=0.0024 Score=60.52 Aligned_cols=55 Identities=20% Similarity=0.273 Sum_probs=42.2
Q ss_pred eeEEecCCCccCCCCC--CCC-------CCCHHHHHHHHHHhhcCCCeEEEECCC-CHhhHHHHhC
Q 044635 574 RAILLDYDGTLMPQAS--IDK-------SPNSKTIDILNSLCRDKNNMVFLVSAK-SRKTLAEWFS 629 (831)
Q Consensus 574 rli~~D~DGTLl~~~~--~~~-------~~s~~~~~~L~~L~~d~g~~V~I~SGR-~~~~l~~~~~ 629 (831)
|+|++|+||||++... ... .+-+.+.++|+.|.+ .|..++|+|++ ........++
T Consensus 1 kli~~DlD~Tl~~~~~~~~~~~~~~~~~~~~~gv~e~L~~Lk~-~g~~l~i~Sn~~~~~~~~~~l~ 65 (128)
T TIGR01681 1 KVIVFDLDNTLWTGENIVVGEDPIIDLEVTIKEIRDKLQTLKK-NGFLLALASYNDDPHVAYELLK 65 (128)
T ss_pred CEEEEeCCCCCCCCCcccccCCcchhhHHHHHHHHHHHHHHHH-CCeEEEEEeCCCCHHHHHHHHH
Confidence 6899999999998521 111 246799999999976 59999999999 6666666554
No 171
>TIGR03351 PhnX-like phosphonatase-like hydrolase. This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the
Probab=96.67 E-value=0.0096 Score=61.68 Aligned_cols=65 Identities=14% Similarity=0.085 Sum_probs=49.0
Q ss_pred HHHHHHHHHHHhhhcCCC-cccEEEEcCCchhHHHHHHcchhcCCCCCCCCCce-EEEEeCCC------CcccceEeCCh
Q 044635 740 KGLVAKRLLSTMQEREML-PDFVLCVGDDRSDEDMFEVIISSMAGPSIAPRAEV-FACTVGRK------PSKAKYYLDDT 811 (831)
Q Consensus 740 KG~al~~Ll~~l~~~g~~-~d~vla~GD~~NDe~Mf~~a~~~~~~~~~~~~~~~-~~v~vG~~------~s~A~y~l~d~ 811 (831)
+......+++++ |+. ++.+++|||+.+|+.+-+.+|.. . ++|.-|.. ...|.+++++.
T Consensus 147 ~p~~~~~a~~~~---~~~~~~~~~~igD~~~Di~aa~~aG~~-----------~~i~~~~g~~~~~~~~~~~~~~~i~~~ 212 (220)
T TIGR03351 147 APDLILRAMELT---GVQDVQSVAVAGDTPNDLEAGINAGAG-----------AVVGVLTGAHDAEELSRHPHTHVLDSV 212 (220)
T ss_pred CHHHHHHHHHHc---CCCChhHeEEeCCCHHHHHHHHHCCCC-----------eEEEEecCCCcHHHHhhcCCceeecCH
Confidence 567888888887 886 79999999999999999999853 2 34544432 24577888888
Q ss_pred hHHHHHH
Q 044635 812 VEIVRLM 818 (831)
Q Consensus 812 ~eV~~~L 818 (831)
.++..++
T Consensus 213 ~~l~~~~ 219 (220)
T TIGR03351 213 ADLPALL 219 (220)
T ss_pred HHHHHhh
Confidence 8876654
No 172
>TIGR01497 kdpB K+-transporting ATPase, B subunit. One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR.
Probab=96.65 E-value=0.0097 Score=71.40 Aligned_cols=141 Identities=11% Similarity=0.181 Sum_probs=100.8
Q ss_pred HHHHHHHHhcCceeEEecCCCccCCCCCCCCCCCHHHHHHHHHHhhcCCCeEEEECCCCHhhHHHHhCCCCCceEEecCC
Q 044635 562 EHIVSAYKRTTTRAILLDYDGTLMPQASIDKSPNSKTIDILNSLCRDKNNMVFLVSAKSRKTLAEWFSPCENLGIAAEHG 641 (831)
Q Consensus 562 ~~~~~~y~~s~~rli~~D~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~~~~~~liaenG 641 (831)
+...+.+.+...+.+++-+|++++..-.....+-+++.+++++|.+ .|..++++||-.......+.+.+. +-
T Consensus 415 ~~~~~~~a~~G~r~l~va~~~~~lG~i~l~D~~Rp~a~eaI~~l~~-~Gi~v~miTGD~~~ta~~iA~~lG---I~---- 486 (675)
T TIGR01497 415 DQAVDQVARQGGTPLVVCEDNRIYGVIYLKDIVKGGIKERFAQLRK-MGIKTIMITGDNRLTAAAIAAEAG---VD---- 486 (675)
T ss_pred HHHHHHHHhCCCeEEEEEECCEEEEEEEecccchhHHHHHHHHHHH-CCCEEEEEcCCCHHHHHHHHHHcC---CC----
Confidence 3344556666678888888888875322455678999999999977 599999999999999988887652 10
Q ss_pred EEEEeCCCceEEEcCCcCCccHHHHHHHHHHHHhccCCCeeEeeccceEEEeeccCCCccchHHHHHHHHHHHhHhcCCC
Q 044635 642 YFFRLRRDEEWETCIPVADCGWKQIAEPVMKLYTETTDGSTIEDKETALVWSYEDADPDFGSCQAKELLDHLESVLANEP 721 (831)
Q Consensus 642 a~i~~~~~~~w~~~~~~~~~~w~~~v~~il~~~~e~~~gs~ie~k~~~l~~~~~~~d~~~~~~~a~el~~~L~~~l~~~~ 721 (831)
. + +
T Consensus 487 ---------~----------------------------------------v-~--------------------------- 489 (675)
T TIGR01497 487 ---------D----------------------------------------F-I--------------------------- 489 (675)
T ss_pred ---------E----------------------------------------E-E---------------------------
Confidence 0 0 0
Q ss_pred eEEEEcCeEEEEEeCCCCHHHHHHHHHHHhhhcCCCcccEEEEcCCchhHHHHHHcchhcCCCCCCCCCceEEEEeCCC-
Q 044635 722 VTVKSGQNLVEVKPQGVNKGLVAKRLLSTMQEREMLPDFVLCVGDDRSDEDMFEVIISSMAGPSIAPRAEVFACTVGRK- 800 (831)
Q Consensus 722 v~v~~g~~~vEV~p~gvnKG~al~~Ll~~l~~~g~~~d~vla~GD~~NDe~Mf~~a~~~~~~~~~~~~~~~~~v~vG~~- 800 (831)
-++.|. +|...++.+.+. | ..|.++||+.||.++++.++ ++++||+.
T Consensus 490 ---------a~~~Pe--dK~~~v~~lq~~----g---~~VamvGDG~NDapAL~~Ad--------------vGiAm~~gt 537 (675)
T TIGR01497 490 ---------AEATPE--DKIALIRQEQAE----G---KLVAMTGDGTNDAPALAQAD--------------VGVAMNSGT 537 (675)
T ss_pred ---------cCCCHH--HHHHHHHHHHHc----C---CeEEEECCCcchHHHHHhCC--------------EeEEeCCCC
Confidence 012333 477777776543 2 35999999999999999997 68888864
Q ss_pred ---CcccceEe--CChhHHHHHHH
Q 044635 801 ---PSKAKYYL--DDTVEIVRLMQ 819 (831)
Q Consensus 801 ---~s~A~y~l--~d~~eV~~~L~ 819 (831)
+..|+.++ +|...+.+.++
T Consensus 538 ~~akeaadivLldd~~s~Iv~av~ 561 (675)
T TIGR01497 538 QAAKEAANMVDLDSDPTKLIEVVH 561 (675)
T ss_pred HHHHHhCCEEECCCCHHHHHHHHH
Confidence 46778876 45677766655
No 173
>COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=96.60 E-value=0.0028 Score=65.58 Aligned_cols=44 Identities=18% Similarity=0.170 Sum_probs=39.1
Q ss_pred EEeCCCCHHHHHHHHHHHhhhcCCCcccEEEEcCCchhHHHHHHcch
Q 044635 733 VKPQGVNKGLVAKRLLSTMQEREMLPDFVLCVGDDRSDEDMFEVIIS 779 (831)
Q Consensus 733 V~p~gvnKG~al~~Ll~~l~~~g~~~d~vla~GD~~NDe~Mf~~a~~ 779 (831)
..-.+-.|..+++.+++.+ |++++.++++|||.||.+||+.+++
T Consensus 138 ~~~~~~~K~~~l~~~~~~~---g~~~~~~~a~gDs~nDlpml~~ag~ 181 (212)
T COG0560 138 PICDGEGKAKALRELAAEL---GIPLEETVAYGDSANDLPMLEAAGL 181 (212)
T ss_pred eecCcchHHHHHHHHHHHc---CCCHHHeEEEcCchhhHHHHHhCCC
Confidence 3344567999999999988 9999999999999999999999985
No 174
>TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672. Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion.
Probab=96.57 E-value=0.0048 Score=64.76 Aligned_cols=73 Identities=14% Similarity=0.231 Sum_probs=51.2
Q ss_pred cccCCHHHHHHHHHhcCceeEEecCCCccCCCCC---CCCC-CCH---------------------------HHHHHHHH
Q 044635 556 FKKLSMEHIVSAYKRTTTRAILLDYDGTLMPQAS---IDKS-PNS---------------------------KTIDILNS 604 (831)
Q Consensus 556 f~~l~~~~~~~~y~~s~~rli~~D~DGTLl~~~~---~~~~-~s~---------------------------~~~~~L~~ 604 (831)
..=.++++|.+.....+.-.|+||+||||++... .... +++ .+.++|+.
T Consensus 46 ~~~~~~~~~~~~~~~~~p~aViFDlDgTLlDSs~~~~~G~~~~s~~~~~~l~g~~~w~~~~~~~~~~s~p~~~a~elL~~ 125 (237)
T TIGR01672 46 IHWISVAQIENSLEGRPPIAVSFDIDDTVLFSSPGFWRGKKTFSPGSEDYLKNQVFWEKVNNGWDEFSIPKEVARQLIDM 125 (237)
T ss_pred eeEEEHHHHHHhcCCCCCeEEEEeCCCccccCcHHHhCCcccCCHHHhhhhcChHHHHHHHHhcccCCcchhHHHHHHHH
Confidence 3347889999998877777999999999998543 1111 122 27788888
Q ss_pred HhhcCCCeEEEECCCC----HhhHHHHhC
Q 044635 605 LCRDKNNMVFLVSAKS----RKTLAEWFS 629 (831)
Q Consensus 605 L~~d~g~~V~I~SGR~----~~~l~~~~~ 629 (831)
+.+ .|..++|+|+|. ...++.+++
T Consensus 126 l~~-~G~~i~iVTnr~~~k~~~~a~~ll~ 153 (237)
T TIGR01672 126 HQR-RGDAIFFVTGRTPGKTDTVSKTLAK 153 (237)
T ss_pred HHH-CCCEEEEEeCCCCCcCHHHHHHHHH
Confidence 876 599999999993 334444443
No 175
>TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA. In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme.
Probab=96.54 E-value=0.0027 Score=60.22 Aligned_cols=56 Identities=23% Similarity=0.324 Sum_probs=42.8
Q ss_pred eeEEecCCCccCCCCC-----CCCCCCHHHHHHHHHHhhcCCCeEEEECCCC--------HhhHHHHhCC
Q 044635 574 RAILLDYDGTLMPQAS-----IDKSPNSKTIDILNSLCRDKNNMVFLVSAKS--------RKTLAEWFSP 630 (831)
Q Consensus 574 rli~~D~DGTLl~~~~-----~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~--------~~~l~~~~~~ 630 (831)
|++++|+||||++... ....+.+.+.++|+.|.+ .|..++|+|+++ ...+..++..
T Consensus 1 k~~~~D~dgtL~~~~~~~~~~~~~~~~~~v~~~l~~L~~-~g~~l~i~Sn~~~~~~~~~~~~~~~~~l~~ 69 (132)
T TIGR01662 1 KGVVLDLDGTLTDDVPYVDDEDERILYPEVPDALAELKE-AGYKVVIVTNQSGIGRGKFSSGRVARRLEE 69 (132)
T ss_pred CEEEEeCCCceecCCCCCCCHHHheeCCCHHHHHHHHHH-CCCEEEEEECCccccccHHHHHHHHHHHHH
Confidence 6899999999996210 123567899999999976 599999999998 5556666553
No 176
>TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase. .
Probab=96.52 E-value=0.0094 Score=70.52 Aligned_cols=61 Identities=11% Similarity=0.157 Sum_probs=46.8
Q ss_pred hcCceeEEecCCCccCCCCCCCCCCCHHHHHHHHHHhhcCCC-eEEEECCCCHhhHHHHhCCC
Q 044635 570 RTTTRAILLDYDGTLMPQASIDKSPNSKTIDILNSLCRDKNN-MVFLVSAKSRKTLAEWFSPC 631 (831)
Q Consensus 570 ~s~~rli~~D~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~-~V~I~SGR~~~~l~~~~~~~ 631 (831)
....+.++.-.||++...-.....+-+.+.++|++|.+ .|. .++++||.+....+...+.+
T Consensus 339 ~~~~~~~~v~~~~~~~g~i~~~d~l~~~~~e~i~~L~~-~Gi~~v~vvTgd~~~~a~~i~~~l 400 (536)
T TIGR01512 339 SAGKTIVHVARDGTYLGYILLSDEPRPDAAEAIAELKA-LGIEKVVMLTGDRRAVAERVAREL 400 (536)
T ss_pred hCCCeEEEEEECCEEEEEEEEeccchHHHHHHHHHHHH-cCCCcEEEEcCCCHHHHHHHHHHc
Confidence 34456667777888775322345677999999999977 588 99999999999998888754
No 177
>TIGR01261 hisB_Nterm histidinol-phosphatase. This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis.
Probab=96.46 E-value=0.019 Score=56.66 Aligned_cols=37 Identities=16% Similarity=0.075 Sum_probs=31.8
Q ss_pred HHHHHHHHHHHhhhcCCCcccEEEEcCCchhHHHHHHcch
Q 044635 740 KGLVAKRLLSTMQEREMLPDFVLCVGDDRSDEDMFEVIIS 779 (831)
Q Consensus 740 KG~al~~Ll~~l~~~g~~~d~vla~GD~~NDe~Mf~~a~~ 779 (831)
|-..++.+++.+ +++++++++|||+.+|+++-+.+|.
T Consensus 105 ~~~~~~~~~~~~---~~~~~e~l~IGD~~~Di~~A~~aGi 141 (161)
T TIGR01261 105 KIKLLEPYLKKN---LIDKARSYVIGDRETDMQLAENLGI 141 (161)
T ss_pred CHHHHHHHHHHc---CCCHHHeEEEeCCHHHHHHHHHCCC
Confidence 456677777777 8899999999999999999998875
No 178
>COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism]
Probab=96.25 E-value=0.37 Score=51.45 Aligned_cols=54 Identities=24% Similarity=0.350 Sum_probs=41.1
Q ss_pred CceeEEecCCCccCCCCCCCCCCCHHHHHHHHHHhhcCCCeEEEE---CCCCHhhHHHHhCC
Q 044635 572 TTRAILLDYDGTLMPQASIDKSPNSKTIDILNSLCRDKNNMVFLV---SAKSRKTLAEWFSP 630 (831)
Q Consensus 572 ~~rli~~D~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~---SGR~~~~l~~~~~~ 630 (831)
+.+.+++|+||||.. ...+-|...++|++|.+ .|..++++ |.|+++.+.+.+..
T Consensus 7 ~y~~~l~DlDGvl~~----G~~~ipga~e~l~~L~~-~g~~~iflTNn~~~s~~~~~~~L~~ 63 (269)
T COG0647 7 KYDGFLFDLDGVLYR----GNEAIPGAAEALKRLKA-AGKPVIFLTNNSTRSREVVAARLSS 63 (269)
T ss_pred hcCEEEEcCcCceEe----CCccCchHHHHHHHHHH-cCCeEEEEeCCCCCCHHHHHHHHHh
Confidence 457899999999997 55667999999999987 58888887 45556645554443
No 179
>TIGR01686 FkbH FkbH-like domain. The C-terminal portion of this domain is unique to this family (by BLAST).
Probab=96.24 E-value=0.034 Score=61.37 Aligned_cols=57 Identities=16% Similarity=0.230 Sum_probs=44.3
Q ss_pred CceeEEecCCCccCCCCCCC--------CCCCHHHHHHHHHHhhcCCCeEEEECCCCHhhHHHHhC
Q 044635 572 TTRAILLDYDGTLMPQASID--------KSPNSKTIDILNSLCRDKNNMVFLVSAKSRKTLAEWFS 629 (831)
Q Consensus 572 ~~rli~~D~DGTLl~~~~~~--------~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~ 629 (831)
.+|+|++|+|+||....-.+ ..+-+.+.++|++|.+ .|..++|||..+...+...+.
T Consensus 2 ~~k~~v~DlDnTlw~gv~~e~g~~~i~~~~~~~~~~e~L~~L~~-~Gi~lai~S~n~~~~a~~~l~ 66 (320)
T TIGR01686 2 ALKVLVLDLDNTLWGGVLGEDGIDNLNLSPLHKTLQEKIKTLKK-QGFLLALASKNDEDDAKKVFE 66 (320)
T ss_pred CeEEEEEcCCCCCCCCEEccCCccccccCccHHHHHHHHHHHHh-CCCEEEEEcCCCHHHHHHHHH
Confidence 47899999999999742101 1234789999999976 699999999998888877775
No 180
>TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase. One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification.
Probab=96.23 E-value=0.022 Score=67.76 Aligned_cols=61 Identities=13% Similarity=0.243 Sum_probs=48.9
Q ss_pred hcCceeEEecCCCccCCCCCCCCCCCHHHHHHHHHHhhcCCCeEEEECCCCHhhHHHHhCCC
Q 044635 570 RTTTRAILLDYDGTLMPQASIDKSPNSKTIDILNSLCRDKNNMVFLVSAKSRKTLAEWFSPC 631 (831)
Q Consensus 570 ~s~~rli~~D~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~~ 631 (831)
+...+.+.++.||+++..-.....+-+.+.++|++|.+ .|..++++||.+....+...+.+
T Consensus 382 ~~g~~~~~~~~~~~~~g~~~~~d~l~~~a~e~i~~Lk~-~Gi~v~ilSgd~~~~a~~ia~~l 442 (562)
T TIGR01511 382 EQGSTSVLVAVNGELAGVFALEDQLRPEAKEVIQALKR-RGIEPVMLTGDNRKTAKAVAKEL 442 (562)
T ss_pred hCCCEEEEEEECCEEEEEEEecccccHHHHHHHHHHHH-cCCeEEEEcCCCHHHHHHHHHHc
Confidence 44568899999999876322355678999999999977 59999999999999888887654
No 181
>TIGR01664 DNA-3'-Pase DNA 3'-phosphatase. The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region.
Probab=96.09 E-value=0.0078 Score=59.78 Aligned_cols=49 Identities=18% Similarity=0.199 Sum_probs=36.8
Q ss_pred CceeEEecCCCccCCCCCCCCC---------CCHHHHHHHHHHhhcCCCeEEEECCCCH
Q 044635 572 TTRAILLDYDGTLMPQASIDKS---------PNSKTIDILNSLCRDKNNMVFLVSAKSR 621 (831)
Q Consensus 572 ~~rli~~D~DGTLl~~~~~~~~---------~s~~~~~~L~~L~~d~g~~V~I~SGR~~ 621 (831)
+.|++++|+||||+...+.... +-+.+.++|++|.+ .|..++|+|..+.
T Consensus 12 ~~k~~~~D~Dgtl~~~~~~~~~~~~~~~~~~~~pgv~e~L~~Lk~-~G~~l~I~TN~~~ 69 (166)
T TIGR01664 12 QSKVAAFDLDGTLITTRSGKVFPTSASDWRFLYPEIPAKLQELDD-EGYKIVIFTNQSG 69 (166)
T ss_pred cCcEEEEeCCCceEecCCCCcccCChHHeEEecCCHHHHHHHHHH-CCCEEEEEeCCcc
Confidence 5689999999999974321111 23778999999976 5999999996554
No 182
>PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional
Probab=96.01 E-value=0.031 Score=68.61 Aligned_cols=66 Identities=5% Similarity=0.086 Sum_probs=52.1
Q ss_pred HHHHHhcCceeEEecCCCccCCCCCCCCCCCHHHHHHHHHHhhcCCCeEEEECCCCHhhHHHHhCCC
Q 044635 565 VSAYKRTTTRAILLDYDGTLMPQASIDKSPNSKTIDILNSLCRDKNNMVFLVSAKSRKTLAEWFSPC 631 (831)
Q Consensus 565 ~~~y~~s~~rli~~D~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~~ 631 (831)
.+.+.....+.+++=+||+++..-....++-+++.++|++|.+ .|..++++||.+......+.+.+
T Consensus 540 ~~~~~~~g~~~v~va~~~~~~g~i~l~d~~r~~a~~~i~~L~~-~gi~~~llTGd~~~~a~~ia~~l 605 (741)
T PRK11033 540 INELESAGKTVVLVLRNDDVLGLIALQDTLRADARQAISELKA-LGIKGVMLTGDNPRAAAAIAGEL 605 (741)
T ss_pred HHHHHhCCCEEEEEEECCEEEEEEEEecCCchhHHHHHHHHHH-CCCEEEEEcCCCHHHHHHHHHHc
Confidence 3456666778888888998875222345678999999999977 59999999999999999888754
No 183
>TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116.
Probab=95.93 E-value=0.054 Score=68.02 Aligned_cols=165 Identities=17% Similarity=0.293 Sum_probs=102.3
Q ss_pred HHHHHhcCceeEEecCCC-----ccCCCCCCCCCCCHHHHHHHHHHhhcCCCeEEEECCCCHhhHHHHhCCCCCceEEec
Q 044635 565 VSAYKRTTTRAILLDYDG-----TLMPQASIDKSPNSKTIDILNSLCRDKNNMVFLVSAKSRKTLAEWFSPCENLGIAAE 639 (831)
Q Consensus 565 ~~~y~~s~~rli~~D~DG-----TLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~~~~~~liae 639 (831)
.+.|.+...|.+++=+++ |++..-.....+-+++.+++++|.+ .|..++++||-+........+.+ ++...
T Consensus 495 ~~~~a~~G~rvl~~A~~~~~~~l~~lGli~l~Dp~r~~~~~~i~~l~~-~Gi~v~miTGD~~~tA~~ia~~~---Gi~~~ 570 (884)
T TIGR01522 495 AAEMASAGLRVIAFASGPEKGQLTFLGLVGINDPPRPGVKEAVTTLIT-GGVRIIMITGDSQETAVSIARRL---GMPSK 570 (884)
T ss_pred HHHHHhcCCEEEEEEEEcCCCCeEEEEEEeccCcchhHHHHHHHHHHH-CCCeEEEECCCCHHHHHHHHHHc---CCCCC
Confidence 344555667888887765 4443222455678999999999976 59999999999999999888754 33222
Q ss_pred CCEEEEeCCCceEEEcCCcCCccHHHHHHHHHHHHhccCCCeeEeeccceEEEeeccCCCccchHHHHHHHHHHHhHhcC
Q 044635 640 HGYFFRLRRDEEWETCIPVADCGWKQIAEPVMKLYTETTDGSTIEDKETALVWSYEDADPDFGSCQAKELLDHLESVLAN 719 (831)
Q Consensus 640 nGa~i~~~~~~~w~~~~~~~~~~w~~~v~~il~~~~e~~~gs~ie~k~~~l~~~~~~~d~~~~~~~a~el~~~L~~~l~~ 719 (831)
++..+ . |..++. .+ .++ +.+.+.+
T Consensus 571 ~~~~v------------~----------------------g~~l~~-----------~~-------~~~----l~~~~~~ 594 (884)
T TIGR01522 571 TSQSV------------S----------------------GEKLDA-----------MD-------DQQ----LSQIVPK 594 (884)
T ss_pred CCcee------------E----------------------hHHhHh-----------CC-------HHH----HHHHhhc
Confidence 11110 0 000000 00 011 2222222
Q ss_pred CCeEEEEcCeEEEEEeCCCCHHHHHHHHHHHhhhcCCCcccEEEEcCCchhHHHHHHcchhcCCCCCCCCCceEEEEeCC
Q 044635 720 EPVTVKSGQNLVEVKPQGVNKGLVAKRLLSTMQEREMLPDFVLCVGDDRSDEDMFEVIISSMAGPSIAPRAEVFACTVGR 799 (831)
Q Consensus 720 ~~v~v~~g~~~vEV~p~gvnKG~al~~Ll~~l~~~g~~~d~vla~GD~~NDe~Mf~~a~~~~~~~~~~~~~~~~~v~vG~ 799 (831)
. .+ +-.+.| -.|...++.+-+. | ..|+++||+.||.+|++.|+ ++|++|.
T Consensus 595 ~--~V-----far~~P--~~K~~iv~~lq~~----g---~~v~mvGDGvND~pAl~~Ad--------------VGia~g~ 644 (884)
T TIGR01522 595 V--AV-----FARASP--EHKMKIVKALQKR----G---DVVAMTGDGVNDAPALKLAD--------------IGVAMGQ 644 (884)
T ss_pred C--eE-----EEECCH--HHHHHHHHHHHHC----C---CEEEEECCCcccHHHHHhCC--------------eeEecCC
Confidence 1 11 112333 3577776665432 3 57999999999999999997 6888884
Q ss_pred C-----CcccceEe--CChhHHHHHHH
Q 044635 800 K-----PSKAKYYL--DDTVEIVRLMQ 819 (831)
Q Consensus 800 ~-----~s~A~y~l--~d~~eV~~~L~ 819 (831)
. +..|++++ ++...+.++++
T Consensus 645 ~g~~va~~aaDivl~dd~~~~i~~~i~ 671 (884)
T TIGR01522 645 TGTDVAKEAADMILTDDDFATILSAIE 671 (884)
T ss_pred CcCHHHHHhcCEEEcCCCHHHHHHHHH
Confidence 2 35789988 56788777665
No 184
>PF13524 Glyco_trans_1_2: Glycosyl transferases group 1
Probab=95.91 E-value=0.025 Score=49.84 Aligned_cols=66 Identities=18% Similarity=0.179 Sum_probs=48.2
Q ss_pred CceEEEeccc-ccccccC---CCceeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHhhhhc-cCCHHHHHHHHH
Q 044635 455 KSMLVVSEFI-GCSPSLS---GAIRVNPWNIDAVSDAMDSALEMADQEKQLRHEKHYRYVS-THDVGYWARSFL 523 (831)
Q Consensus 455 ~g~lVlSe~~-G~~~~l~---~allVnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~-~~~~~~W~~~~l 523 (831)
+|.+|+++.. +....+. .++.++ |+++++++|..+|+ .+++++...++.+++|. .|++.+-+++++
T Consensus 21 ~G~~vi~~~~~~~~~~~~~~~~~~~~~--~~~el~~~i~~ll~-~~~~~~~ia~~a~~~v~~~~t~~~~~~~il 91 (92)
T PF13524_consen 21 CGTPVISDDSPGLREIFEDGEHIITYN--DPEELAEKIEYLLE-NPEERRRIAKNARERVLKRHTWEHRAEQIL 91 (92)
T ss_pred CCCeEEECChHHHHHHcCCCCeEEEEC--CHHHHHHHHHHHHC-CHHHHHHHHHHHHHHHHHhCCHHHHHHHHH
Confidence 3556666544 5555562 367777 99999999999998 45677777777888886 788777777665
No 185
>PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated
Probab=95.85 E-value=0.027 Score=65.40 Aligned_cols=66 Identities=20% Similarity=0.195 Sum_probs=47.8
Q ss_pred HHHHHHHHHHHhhhcCCCcccEEEEcCCchhHHHHHHcchhcCCCCCCCCCceEEEEeCCC----CcccceEeCChhHHH
Q 044635 740 KGLVAKRLLSTMQEREMLPDFVLCVGDDRSDEDMFEVIISSMAGPSIAPRAEVFACTVGRK----PSKAKYYLDDTVEIV 815 (831)
Q Consensus 740 KG~al~~Ll~~l~~~g~~~d~vla~GD~~NDe~Mf~~a~~~~~~~~~~~~~~~~~v~vG~~----~s~A~y~l~d~~eV~ 815 (831)
|-..+...++.+ +++++++|||+.+|+.+-+.+|.. .++|.-|.. ...|+|.+++..++.
T Consensus 387 kP~~~~~al~~l-----~~~~~v~VGDs~~Di~aAk~AG~~-----------~I~v~~~~~~~~~~~~~d~~i~~l~el~ 450 (459)
T PRK06698 387 KSDLVKSILNKY-----DIKEAAVVGDRLSDINAAKDNGLI-----------AIGCNFDFAQEDELAQADIVIDDLLELK 450 (459)
T ss_pred CcHHHHHHHHhc-----CcceEEEEeCCHHHHHHHHHCCCe-----------EEEEeCCCCcccccCCCCEEeCCHHHHH
Confidence 445666666654 468899999999999999999852 234444432 246889999999998
Q ss_pred HHHHHH
Q 044635 816 RLMQGL 821 (831)
Q Consensus 816 ~~L~~L 821 (831)
++|..+
T Consensus 451 ~~l~~~ 456 (459)
T PRK06698 451 GILSTV 456 (459)
T ss_pred HHHHHH
Confidence 877543
No 186
>COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only]
Probab=95.84 E-value=0.033 Score=54.15 Aligned_cols=60 Identities=22% Similarity=0.231 Sum_probs=53.1
Q ss_pred HhcCceeEEecCCCccCCCCCCCCCCCHHHHHHHHHHhhcCCCeEEEECCCCHhhHHHHhCCC
Q 044635 569 KRTTTRAILLDYDGTLMPQASIDKSPNSKTIDILNSLCRDKNNMVFLVSAKSRKTLAEWFSPC 631 (831)
Q Consensus 569 ~~s~~rli~~D~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~~ 631 (831)
++...|-+++|+|.||++. .+...+|++++-+..+.. .|..++|+|--+...+..+...+
T Consensus 24 ~~~Gikgvi~DlDNTLv~w--d~~~~tpe~~~W~~e~k~-~gi~v~vvSNn~e~RV~~~~~~l 83 (175)
T COG2179 24 KAHGIKGVILDLDNTLVPW--DNPDATPELRAWLAELKE-AGIKVVVVSNNKESRVARAAEKL 83 (175)
T ss_pred HHcCCcEEEEeccCceecc--cCCCCCHHHHHHHHHHHh-cCCEEEEEeCCCHHHHHhhhhhc
Confidence 4568999999999999997 566789999999999977 59999999999999999888765
No 187
>PRK08238 hypothetical protein; Validated
Probab=95.78 E-value=0.047 Score=63.38 Aligned_cols=35 Identities=14% Similarity=0.161 Sum_probs=25.7
Q ss_pred CHHHHHHHHHHhhcCCCeEEEECCCCHhhHHHHhCC
Q 044635 595 NSKTIDILNSLCRDKNNMVFLVSAKSRKTLAEWFSP 630 (831)
Q Consensus 595 s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~ 630 (831)
.+++.+.|+++.+ .|..++|+||.+...++...+.
T Consensus 74 ~pga~e~L~~lk~-~G~~v~LaTas~~~~a~~i~~~ 108 (479)
T PRK08238 74 NEEVLDYLRAERA-AGRKLVLATASDERLAQAVAAH 108 (479)
T ss_pred ChhHHHHHHHHHH-CCCEEEEEeCCCHHHHHHHHHH
Confidence 3677788887765 5788888888888777766654
No 188
>PF06437 ISN1: IMP-specific 5'-nucleotidase; InterPro: IPR009453 The Saccharomyces cerevisiae ISN1 (YOR155c) gene encodes an IMP-specific 5'-nucleotidase, which catalyses degradation of IMP to inosine as part of the purine salvage pathway.; GO: 0000287 magnesium ion binding, 0016791 phosphatase activity, 0009117 nucleotide metabolic process
Probab=95.63 E-value=0.57 Score=51.54 Aligned_cols=204 Identities=23% Similarity=0.294 Sum_probs=114.9
Q ss_pred Ccccc----cCCHHHHHHHHHhcCceeEEecCCCccCCCCCCCCCCCHHHHHHHHHHhhcCCCeEEEECCCCHhhHHHHh
Q 044635 553 DPNFK----KLSMEHIVSAYKRTTTRAILLDYDGTLMPQASIDKSPNSKTIDILNSLCRDKNNMVFLVSAKSRKTLAEWF 628 (831)
Q Consensus 553 ~~~f~----~l~~~~~~~~y~~s~~rli~~D~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~ 628 (831)
.|+|. -||+.+|..--+..+-+|+-||=|+||.+.+. .-.++..++.-|-+|-+ .|..|.|+|.=++....++.
T Consensus 123 ~PSFNDvR~ILN~AQi~al~~~~~L~LvTFDgDvTLY~DG~-sl~~d~pvi~~ii~LL~-~gv~VgIVTAAGY~~a~kY~ 200 (408)
T PF06437_consen 123 PPSFNDVRHILNTAQIMALAKNYGLKLVTFDGDVTLYEDGA-SLEPDNPVIPRIIKLLR-RGVKVGIVTAAGYPGAEKYE 200 (408)
T ss_pred CCCHHHHHHHHHHHHHHHhcccCCceEEEEcCCcccccCCC-CCCCCchHHHHHHHHHh-cCCeEEEEeCCCCCChHHHH
Confidence 45554 36667766665556889999999999998431 22235556665656655 49999999988776544433
Q ss_pred CC-------------C-----CCce-EEecCCEEEEeCCC----------ceEEEcCCcCCccHHH-HHHHHHHH-----
Q 044635 629 SP-------------C-----ENLG-IAAEHGYFFRLRRD----------EEWETCIPVADCGWKQ-IAEPVMKL----- 673 (831)
Q Consensus 629 ~~-------------~-----~~~~-liaenGa~i~~~~~----------~~w~~~~~~~~~~w~~-~v~~il~~----- 673 (831)
.. + .++. +-+|.-+..+.... .+|.. +.-..|.+ .+..+|+.
T Consensus 201 ~RL~GLL~a~~~~~~Lt~~qk~~l~VMGGEsNYLfr~~~~~~~~L~~v~~~~W~~---~~m~~W~~~dI~~lLD~AE~~L 277 (408)
T PF06437_consen 201 ERLHGLLDAFKDSTDLTPEQKSNLYVMGGESNYLFRYDPESPHGLEFVPREEWLL---PEMKTWSEEDITELLDIAEAAL 277 (408)
T ss_pred HHHHHHHHHHHhccCCCHHHhcCEEEecccceeEEEecCCCCCCeEEccHHhccC---ccccCcCHHHHHHHHHHHHHHH
Confidence 21 2 1222 23344444444332 23431 11134543 45555542
Q ss_pred --Hhc--cCCCeeEeeccceEEEeeccCCCccchHHHHHHHHHHHhHhcC------CCeEEEEcC--eEEEEEeCCCCHH
Q 044635 674 --YTE--TTDGSTIEDKETALVWSYEDADPDFGSCQAKELLDHLESVLAN------EPVTVKSGQ--NLVEVKPQGVNKG 741 (831)
Q Consensus 674 --~~e--~~~gs~ie~k~~~l~~~~~~~d~~~~~~~a~el~~~L~~~l~~------~~v~v~~g~--~~vEV~p~gvnKG 741 (831)
..+ +.| ..|-.|+-++-..- .....+...+.+|+.-.++..+.. .++....|. -+||| -+|.
T Consensus 278 ~~~~~~l~Lp-a~IiRK~RAVGivP-~~~~ki~rE~LEE~VL~vq~~L~~~~~~~~ipfCAFNGGsDVwVDI----GdKs 351 (408)
T PF06437_consen 278 RDCVKRLNLP-ATIIRKERAVGIVP-KPGVKIIREQLEEIVLTVQKTLEESPPGRRIPFCAFNGGSDVWVDI----GDKS 351 (408)
T ss_pred HHHHHHcCCC-eeEEeecceeeEec-CCCCcchhhhHHHHHHHHHHHHHhcCCCCCCceeeecCCcceEEEc----CCcH
Confidence 222 344 44555555543322 222223445666666555544432 344444443 45665 3799
Q ss_pred HHHHHHHHHhh-hcCCCcccEEEEcCC
Q 044635 742 LVAKRLLSTMQ-EREMLPDFVLCVGDD 767 (831)
Q Consensus 742 ~al~~Ll~~l~-~~g~~~d~vla~GD~ 767 (831)
.+++.+.+++. ..++.+.+++-+||-
T Consensus 352 ~GV~~lQ~y~~~~~~i~~~~tLHVGDQ 378 (408)
T PF06437_consen 352 LGVRALQKYFDPEGGIKPSETLHVGDQ 378 (408)
T ss_pred HhHHHHHHHHHhccCCCccceeeehhh
Confidence 99988877762 137899999999994
No 189
>TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit. Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps.
Probab=95.63 E-value=0.084 Score=67.11 Aligned_cols=40 Identities=13% Similarity=0.056 Sum_probs=34.5
Q ss_pred CCCCCHHHHHHHHHHhhcCCCeEEEECCCCHhhHHHHhCCC
Q 044635 591 DKSPNSKTIDILNSLCRDKNNMVFLVSAKSRKTLAEWFSPC 631 (831)
Q Consensus 591 ~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~~ 631 (831)
...|-+++.++++++.+ .|+.|+++|||+...+..+.+.+
T Consensus 566 ~Dplr~~v~~aI~~l~~-~Gi~v~~~TGd~~~ta~~ia~~~ 605 (997)
T TIGR01106 566 IDPPRAAVPDAVGKCRS-AGIKVIMVTGDHPITAKAIAKGV 605 (997)
T ss_pred cCCChHHHHHHHHHHHH-CCCeEEEECCCCHHHHHHHHHHc
Confidence 34567899999999977 59999999999999998888754
No 190
>COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only]
Probab=95.62 E-value=0.01 Score=56.96 Aligned_cols=62 Identities=15% Similarity=0.190 Sum_probs=42.5
Q ss_pred HhcCceeEEecCCCccCCCCC---CC----CCCCHHHHHHHHHHhhcCCCeEEEECCCCHhhHHHHhCCC
Q 044635 569 KRTTTRAILLDYDGTLMPQAS---ID----KSPNSKTIDILNSLCRDKNNMVFLVSAKSRKTLAEWFSPC 631 (831)
Q Consensus 569 ~~s~~rli~~D~DGTLl~~~~---~~----~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~~ 631 (831)
+.+++||+++|+||||++-.- .+ +...-.-=..++.|.+ .|+++.|+|||.-..+++..+.+
T Consensus 4 ra~~IkLli~DVDGvLTDG~ly~~~~Gee~KaFnv~DG~Gik~l~~-~Gi~vAIITGr~s~ive~Ra~~L 72 (170)
T COG1778 4 RAKNIKLLILDVDGVLTDGKLYYDENGEEIKAFNVRDGHGIKLLLK-SGIKVAIITGRDSPIVEKRAKDL 72 (170)
T ss_pred hhhhceEEEEeccceeecCeEEEcCCCceeeeeeccCcHHHHHHHH-cCCeEEEEeCCCCHHHHHHHHHc
Confidence 346789999999999998210 11 1111111233444544 49999999999999999998765
No 191
>KOG3120 consensus Predicted haloacid dehalogenase-like hydrolase [General function prediction only]
Probab=95.50 E-value=0.13 Score=52.12 Aligned_cols=90 Identities=21% Similarity=0.287 Sum_probs=57.7
Q ss_pred eEEEEEeCCCCHHHHHHHHHHHhhhcCCCcccEEEEcCCchhH-HHHHHcchhcCCCCCCCCCceEEEEe--CCCCc--c
Q 044635 729 NLVEVKPQGVNKGLVAKRLLSTMQEREMLPDFVLCVGDDRSDE-DMFEVIISSMAGPSIAPRAEVFACTV--GRKPS--K 803 (831)
Q Consensus 729 ~~vEV~p~gvnKG~al~~Ll~~l~~~g~~~d~vla~GD~~NDe-~Mf~~a~~~~~~~~~~~~~~~~~v~v--G~~~s--~ 803 (831)
+.-..-|++.-||..+..+.......|+..+.++++||+.||. +|++..+.-++++. +.|.+.= ...|. +
T Consensus 153 hsC~~CPsNmCKg~Vl~~~~~s~~~~gv~yer~iYvGDG~nD~CP~l~Lr~~D~ampR-----kgfpl~k~~~~~p~~~k 227 (256)
T KOG3120|consen 153 HSCNLCPSNMCKGLVLDELVASQLKDGVRYERLIYVGDGANDFCPVLRLRACDVAMPR-----KGFPLWKLISANPMLLK 227 (256)
T ss_pred CccCcCchhhhhhHHHHHHHHHHhhcCCceeeEEEEcCCCCCcCcchhcccCceeccc-----CCCchHhhhhcCcceee
Confidence 3444578899999999999887767799999999999999998 55555544444432 0121110 00121 2
Q ss_pred cceEe-CChhHHHHHHHHHHh
Q 044635 804 AKYYL-DDTVEIVRLMQGLAC 823 (831)
Q Consensus 804 A~y~l-~d~~eV~~~L~~L~~ 823 (831)
|.-.. .+-.++...|..+.+
T Consensus 228 asV~~W~sg~d~~~~L~~lik 248 (256)
T KOG3120|consen 228 ASVLEWSSGEDLERILQQLIK 248 (256)
T ss_pred eeEEecccHHHHHHHHHHHHH
Confidence 22222 467777777777654
No 192
>KOG2941 consensus Beta-1,4-mannosyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=95.49 E-value=0.33 Score=52.60 Aligned_cols=160 Identities=14% Similarity=0.141 Sum_probs=104.6
Q ss_pred CcEEEEeccCcccccCHHHHHHHHHHHHHh-------CCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhccCC
Q 044635 338 GKVMLLGVDDMDIFKGISLKLLAMEQLLIQ-------HPEWQGKVVLVQIANPARGRGKDVKEVQAETYSTVERINQTFG 410 (831)
Q Consensus 338 ~~~iil~VdRld~~KGi~~~l~A~~~lL~~-------~P~~~~~vvLvqig~p~r~~~~~~~~l~~~i~~lv~~IN~~~g 410 (831)
..+++++--.-.+-..+.-++.|+..+-++ .|. + |.+|+ |.||..+.|.++|++.
T Consensus 254 ~pallvsSTswTpDEdf~ILL~AL~~y~~~~~~~~~~lP~----l-lciIT----GKGPlkE~Y~~~I~~~--------- 315 (444)
T KOG2941|consen 254 RPALLVSSTSWTPDEDFGILLEALVIYEEQLYDKTHNLPS----L-LCIIT----GKGPLKEKYSQEIHEK--------- 315 (444)
T ss_pred CCeEEEecCCCCCcccHHHHHHHHHhhhhhhhhccCCCCc----E-EEEEc----CCCchhHHHHHHHHHh---------
Confidence 457888888889999999999999854221 232 3 33343 3778878888888775
Q ss_pred CCCCccEEEecCCCCHHHHHHHHHHcCEe--EECCCccCCCC-----CCCCCceEEEeccccccccc----CCCceeCCC
Q 044635 411 KPGYDPVVLIDEPLKFYERIAYYVVAECC--LVTAVRDGSEP-----SSPKKSMLVVSEFIGCSPSL----SGAIRVNPW 479 (831)
Q Consensus 411 ~~~~~pv~~~~~~v~~~el~aly~~ADv~--vvtS~~eGma~-----~~~~~g~lVlSe~~G~~~~l----~~allVnP~ 479 (831)
+|+.|.+.+--++-++.+.++..||.. +-||.. |+.. ..-.+|.+|++=.--|-.+| .+|++++
T Consensus 316 --~~~~v~~~tpWL~aEDYP~ll~saDlGVcLHtSSS-GLDLPMKVVDMFGcglPvcA~~fkcl~ELVkh~eNGlvF~-- 390 (444)
T KOG2941|consen 316 --NLQHVQVCTPWLEAEDYPKLLASADLGVCLHTSSS-GLDLPMKVVDMFGCGLPVCAVNFKCLDELVKHGENGLVFE-- 390 (444)
T ss_pred --cccceeeeecccccccchhHhhccccceEeeecCc-ccCcchhHHHhhcCCCceeeecchhHHHHHhcCCCceEec--
Confidence 677888888778999999999999984 445542 4310 11122544444333566666 5899996
Q ss_pred CHHHHHHHHHHHhcC---CHHHHHHHHHHHhhhhccCCHHHHHHHHHH
Q 044635 480 NIDAVSDAMDSALEM---ADQEKQLRHEKHYRYVSTHDVGYWARSFLQ 524 (831)
Q Consensus 480 d~~~~A~ai~~aL~m---~~~er~~r~~~~~~~v~~~~~~~W~~~~l~ 524 (831)
|.+++|+.|..+.+. +..+-. +.++.+.+..-.+|..+.-+
T Consensus 391 Ds~eLa~ql~~lf~~fp~~a~~l~----~lkkn~~e~~e~RW~~~W~~ 434 (444)
T KOG2941|consen 391 DSEELAEQLQMLFKNFPDNADELN----QLKKNLREEQELRWDESWER 434 (444)
T ss_pred cHHHHHHHHHHHHhcCCCCHHHHH----HHHHhhHHHHhhhHHHHHHH
Confidence 799999999998872 222221 23333444455677665433
No 193
>TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others.
Probab=95.39 E-value=0.1 Score=65.96 Aligned_cols=138 Identities=17% Similarity=0.207 Sum_probs=88.9
Q ss_pred CCCCCHHHHHHHHHHhhcCCCeEEEECCCCHhhHHHHhCCCCCceEEecCCEEEEeCCCceEEEcCCcCCccHHHHHHHH
Q 044635 591 DKSPNSKTIDILNSLCRDKNNMVFLVSAKSRKTLAEWFSPCENLGIAAEHGYFFRLRRDEEWETCIPVADCGWKQIAEPV 670 (831)
Q Consensus 591 ~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~~~~~~liaenGa~i~~~~~~~w~~~~~~~~~~w~~~v~~i 670 (831)
...+-+++.+++++|.+ .|..++++||-.........+.+ ++..+++..+ .. +.+
T Consensus 577 ~Dplr~~~~~aI~~l~~-aGI~v~miTGD~~~tA~~iA~~~---GI~~~~~~vi------------~G------~~~--- 631 (941)
T TIGR01517 577 KDPLRPGVREAVQECQR-AGITVRMVTGDNIDTAKAIARNC---GILTFGGLAM------------EG------KEF--- 631 (941)
T ss_pred cCCCchhHHHHHHHHHH-CCCEEEEECCCChHHHHHHHHHc---CCCCCCceEe------------eH------HHh---
Confidence 44677899999999977 59999999999999998887754 3332222100 00 000
Q ss_pred HHHHhccCCCeeEeeccceEEEeeccCCCccchHHHHHHHHHHHhHhcCCCeEEEEcCeEEEEEeCCCCHHHHHHHHHHH
Q 044635 671 MKLYTETTDGSTIEDKETALVWSYEDADPDFGSCQAKELLDHLESVLANEPVTVKSGQNLVEVKPQGVNKGLVAKRLLST 750 (831)
Q Consensus 671 l~~~~e~~~gs~ie~k~~~l~~~~~~~d~~~~~~~a~el~~~L~~~l~~~~v~v~~g~~~vEV~p~gvnKG~al~~Ll~~ 750 (831)
+ +. . .+++.+.+.+. . -+-.+.|. .|...++.+.+.
T Consensus 632 -~-----------------------~l----~-------~~el~~~i~~~--~-----Vfar~sPe--~K~~iV~~lq~~ 667 (941)
T TIGR01517 632 -R-----------------------RL----V-------YEEMDPILPKL--R-----VLARSSPL--DKQLLVLMLKDM 667 (941)
T ss_pred -h-----------------------hC----C-------HHHHHHHhccC--e-----EEEECCHH--HHHHHHHHHHHC
Confidence 0 00 0 01122222221 1 22345565 499988887653
Q ss_pred hhhcCCCcccEEEEcCCchhHHHHHHcchhcCCCCCCCCCceEEEEeC-CC----CcccceEeC--ChhHHHHHH
Q 044635 751 MQEREMLPDFVLCVGDDRSDEDMFEVIISSMAGPSIAPRAEVFACTVG-RK----PSKAKYYLD--DTVEIVRLM 818 (831)
Q Consensus 751 l~~~g~~~d~vla~GD~~NDe~Mf~~a~~~~~~~~~~~~~~~~~v~vG-~~----~s~A~y~l~--d~~eV~~~L 818 (831)
| ..|.++||+.||.+|++.|+ +|++|| +. +..|++++- +-..+.+++
T Consensus 668 ----g---~vVam~GDGvNDapALk~Ad--------------VGIAmg~~gtdvAk~aADivL~dd~f~~I~~~i 721 (941)
T TIGR01517 668 ----G---EVVAVTGDGTNDAPALKLAD--------------VGFSMGISGTEVAKEASDIILLDDNFASIVRAV 721 (941)
T ss_pred ----C---CEEEEECCCCchHHHHHhCC--------------cceecCCCccHHHHHhCCEEEecCCHHHHHHHH
Confidence 3 36999999999999999997 688888 32 567888874 566666665
No 194
>PRK01122 potassium-transporting ATPase subunit B; Provisional
Probab=95.35 E-value=0.095 Score=63.20 Aligned_cols=139 Identities=9% Similarity=0.162 Sum_probs=98.3
Q ss_pred HHHHHHhcCceeEEecCCCccCCCCCCCCCCCHHHHHHHHHHhhcCCCeEEEECCCCHhhHHHHhCCCCCceEEecCCEE
Q 044635 564 IVSAYKRTTTRAILLDYDGTLMPQASIDKSPNSKTIDILNSLCRDKNNMVFLVSAKSRKTLAEWFSPCENLGIAAEHGYF 643 (831)
Q Consensus 564 ~~~~y~~s~~rli~~D~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~~~~~~liaenGa~ 643 (831)
..+.+.+...+.+++-.|++++..-.....+-+++.+++++|++ .|..++++||=+......+.+++. +-
T Consensus 416 ~~~~~a~~G~~~l~va~~~~~lG~i~l~D~~R~~~~eai~~Lr~-~GI~vvMiTGDn~~TA~aIA~elG---Id------ 485 (679)
T PRK01122 416 AVDEVARKGGTPLVVAEDNRVLGVIYLKDIVKPGIKERFAELRK-MGIKTVMITGDNPLTAAAIAAEAG---VD------ 485 (679)
T ss_pred HHHHHHhCCCcEEEEEECCeEEEEEEEeccCchhHHHHHHHHHH-CCCeEEEECCCCHHHHHHHHHHcC---Cc------
Confidence 34455556667787778888875322345678999999999977 599999999999999988887642 20
Q ss_pred EEeCCCceEEEcCCcCCccHHHHHHHHHHHHhccCCCeeEeeccceEEEeeccCCCccchHHHHHHHHHHHhHhcCCCeE
Q 044635 644 FRLRRDEEWETCIPVADCGWKQIAEPVMKLYTETTDGSTIEDKETALVWSYEDADPDFGSCQAKELLDHLESVLANEPVT 723 (831)
Q Consensus 644 i~~~~~~~w~~~~~~~~~~w~~~v~~il~~~~e~~~gs~ie~k~~~l~~~~~~~d~~~~~~~a~el~~~L~~~l~~~~v~ 723 (831)
. + +
T Consensus 486 -------~----------------------------------------v-~----------------------------- 488 (679)
T PRK01122 486 -------D----------------------------------------F-L----------------------------- 488 (679)
T ss_pred -------E----------------------------------------E-E-----------------------------
Confidence 0 0 1
Q ss_pred EEEcCeEEEEEeCCCCHHHHHHHHHHHhhhcCCCcccEEEEcCCchhHHHHHHcchhcCCCCCCCCCceEEEEeCCC---
Q 044635 724 VKSGQNLVEVKPQGVNKGLVAKRLLSTMQEREMLPDFVLCVGDDRSDEDMFEVIISSMAGPSIAPRAEVFACTVGRK--- 800 (831)
Q Consensus 724 v~~g~~~vEV~p~gvnKG~al~~Ll~~l~~~g~~~d~vla~GD~~NDe~Mf~~a~~~~~~~~~~~~~~~~~v~vG~~--- 800 (831)
=++.|. +|-..++.+.+. | .-|.++||+.||-++++.++ ++++||+.
T Consensus 489 -------A~~~Pe--dK~~iV~~lQ~~----G---~~VaMtGDGvNDAPALa~AD--------------VGIAMgsGTdv 538 (679)
T PRK01122 489 -------AEATPE--DKLALIRQEQAE----G---RLVAMTGDGTNDAPALAQAD--------------VGVAMNSGTQA 538 (679)
T ss_pred -------ccCCHH--HHHHHHHHHHHc----C---CeEEEECCCcchHHHHHhCC--------------EeEEeCCCCHH
Confidence 112222 266666665443 3 35899999999999999997 78999865
Q ss_pred -CcccceEe--CChhHHHHHHH
Q 044635 801 -PSKAKYYL--DDTVEIVRLMQ 819 (831)
Q Consensus 801 -~s~A~y~l--~d~~eV~~~L~ 819 (831)
+..|+-++ +|...+.+.++
T Consensus 539 AkeAADiVLldd~~s~Iv~av~ 560 (679)
T PRK01122 539 AKEAGNMVDLDSNPTKLIEVVE 560 (679)
T ss_pred HHHhCCEEEeCCCHHHHHHHHH
Confidence 56777776 45777776665
No 195
>PLN02940 riboflavin kinase
Probab=95.14 E-value=0.092 Score=59.42 Aligned_cols=62 Identities=13% Similarity=0.026 Sum_probs=45.9
Q ss_pred HHHHHHHHHHHhhhcCCCcccEEEEcCCchhHHHHHHcchhcCCCCCCCCCceEEEEeCCC----CcccceEeCChhHHH
Q 044635 740 KGLVAKRLLSTMQEREMLPDFVLCVGDDRSDEDMFEVIISSMAGPSIAPRAEVFACTVGRK----PSKAKYYLDDTVEIV 815 (831)
Q Consensus 740 KG~al~~Ll~~l~~~g~~~d~vla~GD~~NDe~Mf~~a~~~~~~~~~~~~~~~~~v~vG~~----~s~A~y~l~d~~eV~ 815 (831)
+.......++.+ |++++++++|||+.+|+..-+.+|.. +++|+-|.. .+.|++.+++..++.
T Consensus 152 ~p~~~~~a~~~l---gv~p~~~l~VGDs~~Di~aA~~aGi~-----------~I~v~~g~~~~~~~~~ad~~i~sl~el~ 217 (382)
T PLN02940 152 SPDIFLEAAKRL---NVEPSNCLVIEDSLPGVMAGKAAGME-----------VIAVPSIPKQTHLYSSADEVINSLLDLQ 217 (382)
T ss_pred CHHHHHHHHHHc---CCChhHEEEEeCCHHHHHHHHHcCCE-----------EEEECCCCcchhhccCccEEeCCHhHcC
Confidence 456778888887 89999999999999999999988752 244443432 246777788777653
No 196
>PRK14010 potassium-transporting ATPase subunit B; Provisional
Probab=95.06 E-value=0.14 Score=61.74 Aligned_cols=70 Identities=7% Similarity=0.104 Sum_probs=50.9
Q ss_pred HHHHHHHHHhcCceeEEecCCCccCCCCCCCCCCCHHHHHHHHHHhhcCCCeEEEECCCCHhhHHHHhCCC
Q 044635 561 MEHIVSAYKRTTTRAILLDYDGTLMPQASIDKSPNSKTIDILNSLCRDKNNMVFLVSAKSRKTLAEWFSPC 631 (831)
Q Consensus 561 ~~~~~~~y~~s~~rli~~D~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~~ 631 (831)
.+...+.+.+...+.++.-.|++++..-.....+-+++.+++++|++ .|..++++||-+......+.+++
T Consensus 409 ~~~~~~~~a~~G~~~l~v~~~~~~lG~i~l~Dp~R~~a~e~I~~Lr~-~GI~vvMiTGDn~~TA~aIA~el 478 (673)
T PRK14010 409 LDALVKGVSKKGGTPLVVLEDNEILGVIYLKDVIKDGLVERFRELRE-MGIETVMCTGDNELTAATIAKEA 478 (673)
T ss_pred HHHHHHHHHhCCCeEEEEEECCEEEEEEEeecCCcHHHHHHHHHHHH-CCCeEEEECCCCHHHHHHHHHHc
Confidence 34444555555556655545777764222345678999999999976 59999999999999998888765
No 197
>PF08323 Glyco_transf_5: Starch synthase catalytic domain; InterPro: IPR013534 This region represents the catalytic domain of glycogen (or starch) synthases that use ADP-glucose (2.4.1.21 from EC), rather than UDP-glucose (2.4.1.11 from EC) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate.; PDB: 2BIS_C 3L01_A 3FRO_A 2R4U_A 2R4T_A 3D1J_A 3COP_A 3GUH_A 2QZS_A 3CX4_A ....
Probab=95.03 E-value=0.075 Score=56.29 Aligned_cols=85 Identities=25% Similarity=0.503 Sum_probs=59.2
Q ss_pred HHHHHHHHHcCC---CCCEEEEeCccccchHHHHHhhcC------CCeEEEEEecc-----CCChHHhh--cCCCh----
Q 044635 189 IFADRIMEVINP---EDDFVWVHDYHLMVLPTFLRKRFN------RVKLGFFLHSP-----FPSSEIYK--TLPIR---- 248 (831)
Q Consensus 189 ~fa~~i~~~~~~---~~d~vwvhDyhL~llp~~lr~~~~------~~~i~~flH~P-----fP~~e~f~--~lp~r---- 248 (831)
.|+.++++.++. .-|+|.+||+|-.++|.+|+.... ++|+.|.+|-. ||. +.+. -+|+.
T Consensus 118 ~fs~a~le~~~~l~~~pDIIH~hDW~tal~p~~lk~~~~~~~~~~~~~~v~TIHN~~yqg~~~~-~~~~~~gl~~~~~~~ 196 (245)
T PF08323_consen 118 FFSRAALELLKKLGWKPDIIHCHDWHTALAPLYLKERYQQDPFFANIPTVFTIHNLEYQGIFPP-EDLKALGLPDEYFQN 196 (245)
T ss_dssp HHHHHHHHHHCTCT-S-SEEEEECGGGTTHHHHHHHCCSS------SEEEEEESSTT---EEEG-GGGGCTT-GGGGS-S
T ss_pred HHHHHHHHHHHhhCCCCCEEEecCchHHHHHHHhccccccccccccceeEEEEcccccCCcCCH-HHHHHcCCCHHHhcc
Confidence 555555555432 349999999999999999998764 69999999952 222 1111 12311
Q ss_pred ----------HHHHHHHhcCCeEeecCHHhHHHHHH
Q 044635 249 ----------EEILRALLNSDLIGFHTFDYARHFLS 274 (831)
Q Consensus 249 ----------~eil~~ll~~dligf~t~~~~~~Fl~ 274 (831)
.-+--|+..||.|..-++.|++.-++
T Consensus 197 ~~~~~~~~~in~lk~gi~~AD~v~TVS~~Ya~Ei~~ 232 (245)
T PF08323_consen 197 LDEYEFYGQINFLKAGIVYADKVTTVSPTYAREIQT 232 (245)
T ss_dssp TTTTEETTEEEHHHHHHHHSSEEEESSHHHHHHTTS
T ss_pred ccccccccccCHHHHHHHhcCEeeeCCHHHHHHHhC
Confidence 25668899999999999999987654
No 198
>TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal. This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog.
Probab=95.02 E-value=0.033 Score=56.50 Aligned_cols=39 Identities=33% Similarity=0.367 Sum_probs=35.7
Q ss_pred CCHHHHHHHHHHHhhhcCCCcccEEEEcCCchhHHHHHHcch
Q 044635 738 VNKGLVAKRLLSTMQEREMLPDFVLCVGDDRSDEDMFEVIIS 779 (831)
Q Consensus 738 vnKG~al~~Ll~~l~~~g~~~d~vla~GD~~NDe~Mf~~a~~ 779 (831)
-+|+.+++.+++.+ |+++++++++||+.+|++|++.++.
T Consensus 146 ~~k~~~~~~~~~~~---~~~~~~~i~iGDs~~D~~~a~~ag~ 184 (201)
T TIGR01491 146 DNKGEAVERLKREL---NPSLTETVAVGDSKNDLPMFEVADI 184 (201)
T ss_pred ccHHHHHHHHHHHh---CCCHHHEEEEcCCHhHHHHHHhcCC
Confidence 46999999999887 8899999999999999999999985
No 199
>PTZ00445 p36-lilke protein; Provisional
Probab=94.98 E-value=0.047 Score=55.48 Aligned_cols=158 Identities=19% Similarity=0.202 Sum_probs=96.3
Q ss_pred CHHHHHHHHHhcCceeEEecCCCccCCCCC---CCC---------CCCHHHHHHHHHHhhcCCCeEEEECCCCHhhHHHH
Q 044635 560 SMEHIVSAYKRTTTRAILLDYDGTLMPQAS---IDK---------SPNSKTIDILNSLCRDKNNMVFLVSAKSRKTLAEW 627 (831)
Q Consensus 560 ~~~~~~~~y~~s~~rli~~D~DGTLl~~~~---~~~---------~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~ 627 (831)
.++.++..+++..+|+|++|+|-||++..+ .+. ..+++....+.+|.+ .|..|+|||=-+....
T Consensus 30 ~~~~~v~~L~~~GIk~Va~D~DnTlI~~HsgG~~~~~~~~~~~~~~~tpefk~~~~~l~~-~~I~v~VVTfSd~~~~--- 105 (219)
T PTZ00445 30 SADKFVDLLNECGIKVIASDFDLTMITKHSGGYIDPDNDDIRVLTSVTPDFKILGKRLKN-SNIKISVVTFSDKELI--- 105 (219)
T ss_pred HHHHHHHHHHHcCCeEEEecchhhhhhhhcccccCCCcchhhhhccCCHHHHHHHHHHHH-CCCeEEEEEccchhhc---
Confidence 345677788899999999999999998222 122 268999999999976 5999999985544331
Q ss_pred hCCCCCceEEecCCEEEEeCCCceEEEcCCcCCccHHHHHHHHHHHHhccCCCeeEeeccceEEEeeccCCCccchHHHH
Q 044635 628 FSPCENLGIAAEHGYFFRLRRDEEWETCIPVADCGWKQIAEPVMKLYTETTDGSTIEDKETALVWSYEDADPDFGSCQAK 707 (831)
Q Consensus 628 ~~~~~~~~liaenGa~i~~~~~~~w~~~~~~~~~~w~~~v~~il~~~~e~~~gs~ie~k~~~l~~~~~~~d~~~~~~~a~ 707 (831)
+. ..++.+|. . .+.++..++.- .-..-++. ++-|. |.|... .
T Consensus 106 ----~~----~~~~~~Is------------g-----~~li~~~lk~s---~~~~~i~~-----~~~yy---p~~w~~--p 147 (219)
T PTZ00445 106 ----PS----ENRPRYIS------------G-----DRMVEAALKKS---KCDFKIKK-----VYAYY---PKFWQE--P 147 (219)
T ss_pred ----cc----cCCcceec------------h-----HHHHHHHHHhc---Cccceeee-----eeeeC---CcccCC--h
Confidence 10 01111111 0 12233333311 00111111 12121 222110 1
Q ss_pred HHHHHHHhHhcCCCeEEEEcCeEEEEEeCCCCHHHHHHHHHHHhhhcCCCcccEEEEcCCchhHHHHHHcch
Q 044635 708 ELLDHLESVLANEPVTVKSGQNLVEVKPQGVNKGLVAKRLLSTMQEREMLPDFVLCVGDDRSDEDMFEVIIS 779 (831)
Q Consensus 708 el~~~L~~~l~~~~v~v~~g~~~vEV~p~gvnKG~al~~Ll~~l~~~g~~~d~vla~GD~~NDe~Mf~~a~~ 779 (831)
.....+ . -++|....|..=++++++.. |+.|++++.|=|+....+.-+.+|.
T Consensus 148 ~~y~~~---------g--------l~KPdp~iK~yHle~ll~~~---gl~peE~LFIDD~~~NVeaA~~lGi 199 (219)
T PTZ00445 148 SDYRPL---------G--------LDAPMPLDKSYHLKQVCSDF---NVNPDEILFIDDDMNNCKNALKEGY 199 (219)
T ss_pred hhhhhh---------c--------ccCCCccchHHHHHHHHHHc---CCCHHHeEeecCCHHHHHHHHHCCC
Confidence 111111 0 15677778888889999998 9999999999999999998888874
No 200
>TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668. This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family.
Probab=94.95 E-value=0.073 Score=53.03 Aligned_cols=55 Identities=16% Similarity=0.220 Sum_probs=43.3
Q ss_pred hcCceeEEecCCCccCCCCCCCCCCCHHHHHHHHHHhhcCCCeEEEECCCC-HhhHHHH
Q 044635 570 RTTTRAILLDYDGTLMPQASIDKSPNSKTIDILNSLCRDKNNMVFLVSAKS-RKTLAEW 627 (831)
Q Consensus 570 ~s~~rli~~D~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~-~~~l~~~ 627 (831)
....+++++|+||||+.. ....+.+.+.++|+.|.+ .|..++|+|+.+ ...+..+
T Consensus 22 ~~~v~~vv~D~Dgtl~~~--~~~~~~pgv~e~L~~Lk~-~g~~l~I~Sn~~~~~~~~~~ 77 (170)
T TIGR01668 22 KVGIKGVVLDKDNTLVYP--DHNEAYPALRDWIEELKA-AGRKLLIVSNNAGEQRAKAV 77 (170)
T ss_pred HCCCCEEEEecCCccccC--CCCCcChhHHHHHHHHHH-cCCEEEEEeCCchHHHHHHH
Confidence 357899999999999984 233677899999999976 589999999988 3444433
No 201
>PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A ....
Probab=94.93 E-value=0.0064 Score=55.08 Aligned_cols=50 Identities=24% Similarity=0.458 Sum_probs=36.6
Q ss_pred EEecCCCccCCCCCCCCCCCHHHHHHHHHHhhcCCCeEEEECC---CCHhhHHHHhCC
Q 044635 576 ILLDYDGTLMPQASIDKSPNSKTIDILNSLCRDKNNMVFLVSA---KSRKTLAEWFSP 630 (831)
Q Consensus 576 i~~D~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SG---R~~~~l~~~~~~ 630 (831)
|++|+||||.. ...+-|.+.++|+.|.+ .|..++++|- |++..+.+.+..
T Consensus 1 ~l~D~dGvl~~----g~~~ipga~e~l~~L~~-~g~~~~~lTNns~~s~~~~~~~L~~ 53 (101)
T PF13344_consen 1 FLFDLDGVLYN----GNEPIPGAVEALDALRE-RGKPVVFLTNNSSRSREEYAKKLKK 53 (101)
T ss_dssp EEEESTTTSEE----TTEE-TTHHHHHHHHHH-TTSEEEEEES-SSS-HHHHHHHHHH
T ss_pred CEEeCccEeEe----CCCcCcCHHHHHHHHHH-cCCCEEEEeCCCCCCHHHHHHHHHh
Confidence 68999999997 45567888999999987 4888888854 555555555543
No 202
>TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V). These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in.
Probab=94.86 E-value=0.21 Score=64.05 Aligned_cols=65 Identities=12% Similarity=0.145 Sum_probs=47.6
Q ss_pred EEEeCCCCHHHHHHHHHHHhhhcCCCcccEEEEcCCchhHHHHHHcchhcCCCCCCCCCceEEEEeCCC--CcccceEe-
Q 044635 732 EVKPQGVNKGLVAKRLLSTMQEREMLPDFVLCVGDDRSDEDMFEVIISSMAGPSIAPRAEVFACTVGRK--PSKAKYYL- 808 (831)
Q Consensus 732 EV~p~gvnKG~al~~Ll~~l~~~g~~~d~vla~GD~~NDe~Mf~~a~~~~~~~~~~~~~~~~~v~vG~~--~s~A~y~l- 808 (831)
-+.|. .|...++.+.+. | ..|.++||+.||.++++.|. +|+++|+. .-.|++.+
T Consensus 784 R~sP~--qK~~iV~~lq~~----g---~~V~m~GDG~ND~~ALK~Ad--------------VGIam~~~das~AA~f~l~ 840 (1054)
T TIGR01657 784 RMAPD--QKETLVELLQKL----D---YTVGMCGDGANDCGALKQAD--------------VGISLSEAEASVAAPFTSK 840 (1054)
T ss_pred ecCHH--HHHHHHHHHHhC----C---CeEEEEeCChHHHHHHHhcC--------------cceeeccccceeecccccC
Confidence 35565 499988887653 4 46999999999999999997 57888754 45677775
Q ss_pred -CChhHHHHHHH
Q 044635 809 -DDTVEIVRLMQ 819 (831)
Q Consensus 809 -~d~~eV~~~L~ 819 (831)
++...|.++++
T Consensus 841 ~~~~~~I~~~I~ 852 (1054)
T TIGR01657 841 LASISCVPNVIR 852 (1054)
T ss_pred CCcHHHHHHHHH
Confidence 35566666555
No 203
>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B.
Probab=94.86 E-value=0.031 Score=56.23 Aligned_cols=34 Identities=12% Similarity=0.212 Sum_probs=28.2
Q ss_pred HHHHHHHHHHhhcCCCeEEEECCCCHhhHHHHhCC
Q 044635 596 SKTIDILNSLCRDKNNMVFLVSAKSRKTLAEWFSP 630 (831)
Q Consensus 596 ~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~ 630 (831)
+++.+.|+.+.+ .|..++|+||-....++.+...
T Consensus 92 ~~~~e~i~~~~~-~~~~v~IvS~~~~~~i~~~~~~ 125 (192)
T PF12710_consen 92 PDAMELIRELKD-NGIKVVIVSGSPDEIIEPIAER 125 (192)
T ss_dssp TTHHHHHHHHHH-TTSEEEEEEEEEHHHHHHHHHH
T ss_pred hhHHHHHHHHHH-CCCEEEEECCCcHHHHHHHHHH
Confidence 577788888866 5999999999998888888653
No 204
>TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain. This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3.
Probab=94.78 E-value=0.035 Score=53.83 Aligned_cols=46 Identities=24% Similarity=0.288 Sum_probs=36.4
Q ss_pred eeEEecCCCccCCCCCCC-------CCCCHHHHHHHHHHhhcCCCeEEEECCCC
Q 044635 574 RAILLDYDGTLMPQASID-------KSPNSKTIDILNSLCRDKNNMVFLVSAKS 620 (831)
Q Consensus 574 rli~~D~DGTLl~~~~~~-------~~~s~~~~~~L~~L~~d~g~~V~I~SGR~ 620 (831)
+.+++|+||||+...+.. -.+-+.+.++|+.|.+ .|..++|+|+.+
T Consensus 1 ~~~~~d~dgtl~~~~~~~~~~~~~~~~~~~g~~~~l~~Lk~-~g~~~~I~Sn~~ 53 (147)
T TIGR01656 1 PALFLDRDGVINEDTVSDYPRSLDDWQLRPGAVPALLTLRA-AGYTVVVVTNQS 53 (147)
T ss_pred CeEEEeCCCceeccCCcccCCCHHHeEEcCChHHHHHHHHH-CCCEEEEEeCCC
Confidence 478999999999854311 1356788999999976 599999999876
No 205
>PRK11009 aphA acid phosphatase/phosphotransferase; Provisional
Probab=94.76 E-value=0.055 Score=56.83 Aligned_cols=62 Identities=11% Similarity=0.259 Sum_probs=44.6
Q ss_pred cCCHHHHHHHHHhcCceeEEecCCCccCCCCCC-------------------------------CCCCCHHHHHHHHHHh
Q 044635 558 KLSMEHIVSAYKRTTTRAILLDYDGTLMPQASI-------------------------------DKSPNSKTIDILNSLC 606 (831)
Q Consensus 558 ~l~~~~~~~~y~~s~~rli~~D~DGTLl~~~~~-------------------------------~~~~s~~~~~~L~~L~ 606 (831)
=.++++|.+.-...+...|.+|+|||+++..+. ...|-+.+.++|+.|.
T Consensus 48 ~~~~~~~~~~~~~~~p~av~~DIDeTvldnsp~~~~~~~~f~~~~~~y~~~~~fw~~y~~~~~~~a~p~~Ga~elL~~L~ 127 (237)
T PRK11009 48 WVSVAQIEKSLEGRPPMAVGFDIDDTVLFSSPGFWRGKKTFSPGSEDYLKNQKFWEKMNNGWDEFSIPKEVARQLIDMHV 127 (237)
T ss_pred EEEHHHhhhhccCCCCcEEEEECcCccccCCchheeeeeccCCCcccccChHHHHHHHHhcccccCcchHHHHHHHHHHH
Confidence 377889988876556669999999999963210 0112344788888886
Q ss_pred hcCCCeEEEECCCC
Q 044635 607 RDKNNMVFLVSAKS 620 (831)
Q Consensus 607 ~d~g~~V~I~SGR~ 620 (831)
+ .|..++++|||+
T Consensus 128 ~-~G~~I~iVTnR~ 140 (237)
T PRK11009 128 K-RGDSIYFITGRT 140 (237)
T ss_pred H-CCCeEEEEeCCC
Confidence 5 588899999886
No 206
>PRK10517 magnesium-transporting ATPase MgtA; Provisional
Probab=94.57 E-value=0.21 Score=62.66 Aligned_cols=137 Identities=19% Similarity=0.211 Sum_probs=88.2
Q ss_pred CCCCCHHHHHHHHHHhhcCCCeEEEECCCCHhhHHHHhCCCCCceEEecCCEEEEeCCCceEEEcCCcCCccHHHHHHHH
Q 044635 591 DKSPNSKTIDILNSLCRDKNNMVFLVSAKSRKTLAEWFSPCENLGIAAEHGYFFRLRRDEEWETCIPVADCGWKQIAEPV 670 (831)
Q Consensus 591 ~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~~~~~~liaenGa~i~~~~~~~w~~~~~~~~~~w~~~v~~i 670 (831)
...|-+++.+++++|.+ .|+.++++||-.......+.+++ |+. ++ . ...
T Consensus 548 ~Dp~R~~a~~aI~~l~~-aGI~v~miTGD~~~tA~~IA~~l---GI~--~~--------~----v~~------------- 596 (902)
T PRK10517 548 LDPPKETTAPALKALKA-SGVTVKILTGDSELVAAKVCHEV---GLD--AG--------E----VLI------------- 596 (902)
T ss_pred hCcchhhHHHHHHHHHH-CCCEEEEEcCCCHHHHHHHHHHc---CCC--cc--------C----cee-------------
Confidence 44577899999999977 59999999999999998888764 221 11 0 000
Q ss_pred HHHHhccCCCeeEeeccceEEEeeccCCCccchHHHHHHHHHHHhHhcCCCeEEEEcCeEEEEEeCCCCHHHHHHHHHHH
Q 044635 671 MKLYTETTDGSTIEDKETALVWSYEDADPDFGSCQAKELLDHLESVLANEPVTVKSGQNLVEVKPQGVNKGLVAKRLLST 750 (831)
Q Consensus 671 l~~~~e~~~gs~ie~k~~~l~~~~~~~d~~~~~~~a~el~~~L~~~l~~~~v~v~~g~~~vEV~p~gvnKG~al~~Ll~~ 750 (831)
|..++. .+ .+++. +.+.+. .-+-.+.|. .|...++.+.+.
T Consensus 597 ---------G~el~~-----------l~-------~~el~----~~~~~~-------~VfAr~sPe--~K~~IV~~Lq~~ 636 (902)
T PRK10517 597 ---------GSDIET-----------LS-------DDELA----NLAERT-------TLFARLTPM--HKERIVTLLKRE 636 (902)
T ss_pred ---------HHHHHh-----------CC-------HHHHH----HHHhhC-------cEEEEcCHH--HHHHHHHHHHHC
Confidence 000000 00 01222 222221 123345565 498888887553
Q ss_pred hhhcCCCcccEEEEcCCchhHHHHHHcchhcCCCCCCCCCceEEEEeCCC----CcccceEe--CChhHHHHHHH
Q 044635 751 MQEREMLPDFVLCVGDDRSDEDMFEVIISSMAGPSIAPRAEVFACTVGRK----PSKAKYYL--DDTVEIVRLMQ 819 (831)
Q Consensus 751 l~~~g~~~d~vla~GD~~NDe~Mf~~a~~~~~~~~~~~~~~~~~v~vG~~----~s~A~y~l--~d~~eV~~~L~ 819 (831)
| .-|.++||+.||.++++.++ +|++||+. +..|+.++ +|...+.+.++
T Consensus 637 ----G---~vVam~GDGvNDaPALk~AD--------------VGIAmg~gtdvAkeaADiVLldd~~~~I~~ai~ 690 (902)
T PRK10517 637 ----G---HVVGFMGDGINDAPALRAAD--------------IGISVDGAVDIAREAADIILLEKSLMVLEEGVI 690 (902)
T ss_pred ----C---CEEEEECCCcchHHHHHhCC--------------EEEEeCCcCHHHHHhCCEEEecCChHHHHHHHH
Confidence 3 45899999999999999997 78999864 56788887 45556655544
No 207
>PHA02530 pseT polynucleotide kinase; Provisional
Probab=94.52 E-value=0.099 Score=56.95 Aligned_cols=57 Identities=18% Similarity=0.303 Sum_probs=46.2
Q ss_pred ceeEEecCCCccCCCCCC---------CCCCCHHHHHHHHHHhhcCCCeEEEECCCCHhhHHHHhCC
Q 044635 573 TRAILLDYDGTLMPQASI---------DKSPNSKTIDILNSLCRDKNNMVFLVSAKSRKTLAEWFSP 630 (831)
Q Consensus 573 ~rli~~D~DGTLl~~~~~---------~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~ 630 (831)
.+++++|+||||...... +..+.+.+.++|++|.+ .|..++|+|||+.......+..
T Consensus 158 ~~~~~~D~dgtl~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~-~g~~i~i~T~r~~~~~~~~l~~ 223 (300)
T PHA02530 158 PKAVIFDIDGTLAKMGGRSPYDWTKVKEDKPNPMVVELVKMYKA-AGYEIIVVSGRDGVCEEDTVEW 223 (300)
T ss_pred CCEEEEECCCcCcCCCCCCccchhhcccCCCChhHHHHHHHHHh-CCCEEEEEeCCChhhHHHHHHH
Confidence 579999999999974321 34678999999999977 5999999999999887666543
No 208
>PRK13222 phosphoglycolate phosphatase; Provisional
Probab=94.52 E-value=0.085 Score=54.61 Aligned_cols=67 Identities=19% Similarity=0.187 Sum_probs=53.4
Q ss_pred HHHHHHHHHHHhhhcCCCcccEEEEcCCchhHHHHHHcchhcCCCCCCCCCceEEEEeCCC------CcccceEeCChhH
Q 044635 740 KGLVAKRLLSTMQEREMLPDFVLCVGDDRSDEDMFEVIISSMAGPSIAPRAEVFACTVGRK------PSKAKYYLDDTVE 813 (831)
Q Consensus 740 KG~al~~Ll~~l~~~g~~~d~vla~GD~~NDe~Mf~~a~~~~~~~~~~~~~~~~~v~vG~~------~s~A~y~l~d~~e 813 (831)
|..+++.+++.+ +.+++++++|||+.+|+++.+.+|.. .+.|..|.. ...|.|++++..+
T Consensus 151 ~~~~~~~~~~~~---~~~~~~~i~igD~~~Di~~a~~~g~~-----------~i~v~~g~~~~~~~~~~~~~~~i~~~~~ 216 (226)
T PRK13222 151 DPAPLLLACEKL---GLDPEEMLFVGDSRNDIQAARAAGCP-----------SVGVTYGYNYGEPIALSEPDVVIDHFAE 216 (226)
T ss_pred ChHHHHHHHHHc---CCChhheEEECCCHHHHHHHHHCCCc-----------EEEECcCCCCccchhhcCCCEEECCHHH
Confidence 567889999988 89999999999999999999999852 245555532 2357899999999
Q ss_pred HHHHHHH
Q 044635 814 IVRLMQG 820 (831)
Q Consensus 814 V~~~L~~ 820 (831)
+..+|..
T Consensus 217 l~~~l~~ 223 (226)
T PRK13222 217 LLPLLGL 223 (226)
T ss_pred HHHHHHH
Confidence 9888753
No 209
>PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases. All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family.
Probab=94.48 E-value=0.064 Score=53.08 Aligned_cols=51 Identities=24% Similarity=0.436 Sum_probs=38.3
Q ss_pred cccccCCHHHHHHHHHhcCceeEEecCCCccCCCCCCCCCCCHHHHHHHHHHhhc
Q 044635 554 PNFKKLSMEHIVSAYKRTTTRAILLDYDGTLMPQASIDKSPNSKTIDILNSLCRD 608 (831)
Q Consensus 554 ~~f~~l~~~~~~~~y~~s~~rli~~D~DGTLl~~~~~~~~~s~~~~~~L~~L~~d 608 (831)
++|..++.+.- ..++..+|.+++|.|+||++. ....++++..+.++++.+.
T Consensus 24 ~si~~I~~~~~--~Lk~~Gik~li~DkDNTL~~~--~~~~i~~~~~~~~~~l~~~ 74 (168)
T PF09419_consen 24 PSIRDIDFEAN--HLKKKGIKALIFDKDNTLTPP--YEDEIPPEYAEWLNELKKQ 74 (168)
T ss_pred CChhhCCcchh--hhhhcCceEEEEcCCCCCCCC--CcCcCCHHHHHHHHHHHHH
Confidence 34555555431 135678999999999999975 5677899999999999763
No 210
>PRK13226 phosphoglycolate phosphatase; Provisional
Probab=94.32 E-value=0.11 Score=54.38 Aligned_cols=66 Identities=15% Similarity=0.065 Sum_probs=52.2
Q ss_pred HHHHHHHHHHHhhhcCCCcccEEEEcCCchhHHHHHHcchhcCCCCCCCCCceEEEEeCCC--C-----cccceEeCChh
Q 044635 740 KGLVAKRLLSTMQEREMLPDFVLCVGDDRSDEDMFEVIISSMAGPSIAPRAEVFACTVGRK--P-----SKAKYYLDDTV 812 (831)
Q Consensus 740 KG~al~~Ll~~l~~~g~~~d~vla~GD~~NDe~Mf~~a~~~~~~~~~~~~~~~~~v~vG~~--~-----s~A~y~l~d~~ 812 (831)
+-..+.++++++ |++++++++|||+.+|+.+-+.+|.. .++|+-|.. + ..|+|.+++..
T Consensus 153 ~p~~~~~~~~~l---~~~p~~~l~IGDs~~Di~aA~~aG~~-----------~i~v~~g~~~~~~~~~~~~~~~~i~~~~ 218 (229)
T PRK13226 153 HPLPLLVAAERI---GVAPTDCVYVGDDERDILAARAAGMP-----------SVAALWGYRLHDDDPLAWQADVLVEQPQ 218 (229)
T ss_pred CHHHHHHHHHHh---CCChhhEEEeCCCHHHHHHHHHCCCc-----------EEEEeecCCCCCcChhhcCCCeeeCCHH
Confidence 446678888888 99999999999999999999999852 356666642 1 24889999999
Q ss_pred HHHHHHH
Q 044635 813 EIVRLMQ 819 (831)
Q Consensus 813 eV~~~L~ 819 (831)
++.+.|.
T Consensus 219 el~~~~~ 225 (229)
T PRK13226 219 LLWNPAT 225 (229)
T ss_pred HHHHHhc
Confidence 9988764
No 211
>TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase. This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes.
Probab=94.31 E-value=0.27 Score=63.07 Aligned_cols=183 Identities=11% Similarity=0.141 Sum_probs=95.3
Q ss_pred CCCCCHHHHHHHHHHhhcCCCeEEEECCCCHhhHHHHhCCCCCceEEecCCEEEEeCCCceEEEcCCcCCccHH---HHH
Q 044635 591 DKSPNSKTIDILNSLCRDKNNMVFLVSAKSRKTLAEWFSPCENLGIAAEHGYFFRLRRDEEWETCIPVADCGWK---QIA 667 (831)
Q Consensus 591 ~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~~~~~~liaenGa~i~~~~~~~w~~~~~~~~~~w~---~~v 667 (831)
..++-+++.++++.|.+ .|++|+++||=...........+ +++..+...+....+.. ..+. +.+
T Consensus 629 eD~lq~~v~etI~~L~~-AGIkv~mlTGD~~~TA~~IA~~~---~ii~~~~~~~~i~~~~~---------~~~~~~~~~i 695 (1057)
T TIGR01652 629 EDKLQEGVPETIELLRQ-AGIKIWVLTGDKVETAINIGYSC---RLLSRNMEQIVITSESL---------DATRSVEAAI 695 (1057)
T ss_pred hhhhhhccHHHHHHHHH-CCCeEEEEcCCcHHHHHHHHHHh---CCCCCCCeEEEEecCch---------hhhHHHHHHH
Confidence 44567788889998876 59999999999999888887543 34443332222211110 0111 111
Q ss_pred HHHHHHHhccCCCeeEeeccceEEEeeccCCCccchHHHHHHHHHHHhHhcCCCeEEEEcCeEEEEEeCCCCHHHHHHHH
Q 044635 668 EPVMKLYTETTDGSTIEDKETALVWSYEDADPDFGSCQAKELLDHLESVLANEPVTVKSGQNLVEVKPQGVNKGLVAKRL 747 (831)
Q Consensus 668 ~~il~~~~e~~~gs~ie~k~~~l~~~~~~~d~~~~~~~a~el~~~L~~~l~~~~v~v~~g~~~vEV~p~gvnKG~al~~L 747 (831)
...+....+... .....+...+...-. .+......++.+++.+.+......+ +-.+.|. .|+..++.+
T Consensus 696 ~~~~~~~~~~~~-~~~~~~~~~lvi~G~----~l~~~l~~~~~~~f~~l~~~~~~vV-----~aR~sP~--qK~~IV~~l 763 (1057)
T TIGR01652 696 KFGLEGTSEEFN-NLGDSGNVALVIDGK----SLGYALDEELEKEFLQLALKCKAVI-----CCRVSPS--QKADVVRLV 763 (1057)
T ss_pred HHHHHHHHHhhh-hhccCCceEEEEccH----HHHHHHhhHHHHHHHHHHhhCCEEE-----EeCCCHH--HHHHHHHHH
Confidence 111110000000 000011122222111 1100000112233433333222112 2235555 599999888
Q ss_pred HHHhhhcCCCcccEEEEcCCchhHHHHHHcchhcCCCCCCCCCceEEEEe-CC----CCcccceEeCChhHHHHHH
Q 044635 748 LSTMQEREMLPDFVLCVGDDRSDEDMFEVIISSMAGPSIAPRAEVFACTV-GR----KPSKAKYYLDDTVEIVRLM 818 (831)
Q Consensus 748 l~~l~~~g~~~d~vla~GD~~NDe~Mf~~a~~~~~~~~~~~~~~~~~v~v-G~----~~s~A~y~l~d~~eV~~~L 818 (831)
-+.. -..|+++||+.||.+|++.|. +||.+ |. +...|+|.+.+-..+.++|
T Consensus 764 k~~~------~~~vl~iGDG~ND~~mlk~Ad--------------VGIgi~g~eg~qA~~aaD~~i~~F~~L~~ll 819 (1057)
T TIGR01652 764 KKST------GKTTLAIGDGANDVSMIQEAD--------------VGVGISGKEGMQAVMASDFAIGQFRFLTKLL 819 (1057)
T ss_pred HhcC------CCeEEEEeCCCccHHHHhhcC--------------eeeEecChHHHHHHHhhhhhhhhHHHHHHHH
Confidence 6542 246999999999999999997 45654 32 3457888888766666555
No 212
>COG4087 Soluble P-type ATPase [General function prediction only]
Probab=94.30 E-value=0.25 Score=46.15 Aligned_cols=54 Identities=22% Similarity=0.289 Sum_probs=42.3
Q ss_pred CCCcccEEEEcCCchhHHHHHHcchhcCCCCCCCCCceEEEEeCC--CC----cccceEeCChhHHHHHHHHH
Q 044635 755 EMLPDFVLCVGDDRSDEDMFEVIISSMAGPSIAPRAEVFACTVGR--KP----SKAKYYLDDTVEIVRLMQGL 821 (831)
Q Consensus 755 g~~~d~vla~GD~~NDe~Mf~~a~~~~~~~~~~~~~~~~~v~vG~--~~----s~A~y~l~d~~eV~~~L~~L 821 (831)
+.+.++++++||+.||+.|++.+.-. -|++|+ .+ ..|++++.+..+++.++...
T Consensus 90 kk~~~k~vmVGnGaND~laLr~ADlG-------------I~tiq~e~v~~r~l~~ADvvik~i~e~ldl~~~~ 149 (152)
T COG4087 90 KKRYEKVVMVGNGANDILALREADLG-------------ICTIQQEGVPERLLLTADVVLKEIAEILDLLKDT 149 (152)
T ss_pred cCCCcEEEEecCCcchHHHhhhcccc-------------eEEeccCCcchHHHhhchhhhhhHHHHHHHhhcc
Confidence 45678999999999999999998742 356664 34 36888899999988887654
No 213
>TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase. The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis.
Probab=94.27 E-value=0.31 Score=61.13 Aligned_cols=137 Identities=17% Similarity=0.189 Sum_probs=87.2
Q ss_pred CCCCCHHHHHHHHHHhhcCCCeEEEECCCCHhhHHHHhCCCCCceEEecCCEEEEeCCCceEEEcCCcCCccHHHHHHHH
Q 044635 591 DKSPNSKTIDILNSLCRDKNNMVFLVSAKSRKTLAEWFSPCENLGIAAEHGYFFRLRRDEEWETCIPVADCGWKQIAEPV 670 (831)
Q Consensus 591 ~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~~~~~~liaenGa~i~~~~~~~w~~~~~~~~~~w~~~v~~i 670 (831)
...|-+++.+++++|.+ .|+.++++||-.......+.+.+ |+.. + .. ..
T Consensus 513 ~Dp~R~~~~~aI~~l~~-aGI~vvmiTGD~~~tA~aIA~~l---GI~~--~--------~v----~~------------- 561 (867)
T TIGR01524 513 LDPPKESTKEAIAALFK-NGINVKVLTGDNEIVTARICQEV---GIDA--N--------DF----LL------------- 561 (867)
T ss_pred eCCCchhHHHHHHHHHH-CCCEEEEEcCCCHHHHHHHHHHc---CCCC--C--------Ce----ee-------------
Confidence 34577899999999977 59999999999999998888754 2310 0 00 00
Q ss_pred HHHHhccCCCeeEeeccceEEEeeccCCCccchHHHHHHHHHHHhHhcCCCeEEEEcCeEEEEEeCCCCHHHHHHHHHHH
Q 044635 671 MKLYTETTDGSTIEDKETALVWSYEDADPDFGSCQAKELLDHLESVLANEPVTVKSGQNLVEVKPQGVNKGLVAKRLLST 750 (831)
Q Consensus 671 l~~~~e~~~gs~ie~k~~~l~~~~~~~d~~~~~~~a~el~~~L~~~l~~~~v~v~~g~~~vEV~p~gvnKG~al~~Ll~~ 750 (831)
|..++. .+ .+++ .+.+.+. . -+-.+.|. .|...++.+.+.
T Consensus 562 ---------g~~l~~-----------~~-------~~el----~~~~~~~--~-----vfAr~~Pe--~K~~iV~~lq~~ 601 (867)
T TIGR01524 562 ---------GADIEE-----------LS-------DEEL----ARELRKY--H-----IFARLTPM--QKSRIIGLLKKA 601 (867)
T ss_pred ---------cHhhhh-----------CC-------HHHH----HHHhhhC--e-----EEEECCHH--HHHHHHHHHHhC
Confidence 000000 00 0111 2222221 1 22335565 488888887543
Q ss_pred hhhcCCCcccEEEEcCCchhHHHHHHcchhcCCCCCCCCCceEEEEeCCC----CcccceEe--CChhHHHHHHH
Q 044635 751 MQEREMLPDFVLCVGDDRSDEDMFEVIISSMAGPSIAPRAEVFACTVGRK----PSKAKYYL--DDTVEIVRLMQ 819 (831)
Q Consensus 751 l~~~g~~~d~vla~GD~~NDe~Mf~~a~~~~~~~~~~~~~~~~~v~vG~~----~s~A~y~l--~d~~eV~~~L~ 819 (831)
| ..|.++||+.||.++++.++ ++++||+. +..|+.++ ++...+..+++
T Consensus 602 ----G---~vVam~GDGvNDapALk~Ad--------------VGIAmg~gtdvAk~aADiVLldd~~~~I~~ai~ 655 (867)
T TIGR01524 602 ----G---HTVGFLGDGINDAPALRKAD--------------VGISVDTAADIAKEASDIILLEKSLMVLEEGVI 655 (867)
T ss_pred ----C---CEEEEECCCcccHHHHHhCC--------------EEEEeCCccHHHHHhCCEEEecCChHHHHHHHH
Confidence 3 46999999999999999997 78999864 56788887 44566655544
No 214
>PRK15122 magnesium-transporting ATPase; Provisional
Probab=94.27 E-value=0.35 Score=60.82 Aligned_cols=137 Identities=17% Similarity=0.178 Sum_probs=89.0
Q ss_pred CCCCCHHHHHHHHHHhhcCCCeEEEECCCCHhhHHHHhCCCCCceEEecCCEEEEeCCCceEEEcCCcCCccHHHHHHHH
Q 044635 591 DKSPNSKTIDILNSLCRDKNNMVFLVSAKSRKTLAEWFSPCENLGIAAEHGYFFRLRRDEEWETCIPVADCGWKQIAEPV 670 (831)
Q Consensus 591 ~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~~~~~~liaenGa~i~~~~~~~w~~~~~~~~~~w~~~v~~i 670 (831)
...|-+++.+++++|.+ .|+.++++||=+......+.+.+ |+. ++. ...
T Consensus 548 ~Dp~R~~a~~aI~~l~~-aGI~v~miTGD~~~tA~aIA~~l---GI~--~~~------------vi~------------- 596 (903)
T PRK15122 548 LDPPKESAAPAIAALRE-NGVAVKVLTGDNPIVTAKICREV---GLE--PGE------------PLL------------- 596 (903)
T ss_pred cCccHHHHHHHHHHHHH-CCCeEEEECCCCHHHHHHHHHHc---CCC--CCC------------ccc-------------
Confidence 44677899999999976 59999999999999998888754 221 110 000
Q ss_pred HHHHhccCCCeeEeeccceEEEeeccCCCccchHHHHHHHHHHHhHhcCCCeEEEEcCeEEEEEeCCCCHHHHHHHHHHH
Q 044635 671 MKLYTETTDGSTIEDKETALVWSYEDADPDFGSCQAKELLDHLESVLANEPVTVKSGQNLVEVKPQGVNKGLVAKRLLST 750 (831)
Q Consensus 671 l~~~~e~~~gs~ie~k~~~l~~~~~~~d~~~~~~~a~el~~~L~~~l~~~~v~v~~g~~~vEV~p~gvnKG~al~~Ll~~ 750 (831)
|..++. .+ .++ +.+...+. .-+-.+.|.. |...++.+.+.
T Consensus 597 ---------G~el~~-----------~~-------~~e----l~~~v~~~-------~VfAr~sPe~--K~~iV~~Lq~~ 636 (903)
T PRK15122 597 ---------GTEIEA-----------MD-------DAA----LAREVEER-------TVFAKLTPLQ--KSRVLKALQAN 636 (903)
T ss_pred ---------hHhhhh-----------CC-------HHH----HHHHhhhC-------CEEEEeCHHH--HHHHHHHHHhC
Confidence 000000 00 012 22222221 1233466664 98888888653
Q ss_pred hhhcCCCcccEEEEcCCchhHHHHHHcchhcCCCCCCCCCceEEEEeCCC----CcccceEe--CChhHHHHHHH
Q 044635 751 MQEREMLPDFVLCVGDDRSDEDMFEVIISSMAGPSIAPRAEVFACTVGRK----PSKAKYYL--DDTVEIVRLMQ 819 (831)
Q Consensus 751 l~~~g~~~d~vla~GD~~NDe~Mf~~a~~~~~~~~~~~~~~~~~v~vG~~----~s~A~y~l--~d~~eV~~~L~ 819 (831)
| .-|.++||+.||.++++.++ +|++||+. +..|+.++ +|...+.++++
T Consensus 637 ----G---~vVamtGDGvNDaPALk~AD--------------VGIAmg~gtdvAkeaADiVLldd~f~~Iv~ai~ 690 (903)
T PRK15122 637 ----G---HTVGFLGDGINDAPALRDAD--------------VGISVDSGADIAKESADIILLEKSLMVLEEGVI 690 (903)
T ss_pred ----C---CEEEEECCCchhHHHHHhCC--------------EEEEeCcccHHHHHhcCEEEecCChHHHHHHHH
Confidence 3 46899999999999999997 78999863 56788887 45566665554
No 215
>TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase. This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast.
Probab=94.14 E-value=0.44 Score=58.88 Aligned_cols=167 Identities=17% Similarity=0.184 Sum_probs=102.0
Q ss_pred HHHHhcCceeEEecC---CC--ccCCCCCCCCCCCHHHHHHHHHHhhcCCCeEEEECCCCHhhHHHHhCCCCCceEEecC
Q 044635 566 SAYKRTTTRAILLDY---DG--TLMPQASIDKSPNSKTIDILNSLCRDKNNMVFLVSAKSRKTLAEWFSPCENLGIAAEH 640 (831)
Q Consensus 566 ~~y~~s~~rli~~D~---DG--TLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~~~~~~liaen 640 (831)
+.+.....|.+++=+ ++ +++..-.....|-+++.+++++|.+ .|..++++||.+......+.+++ |+.. +
T Consensus 410 ~~~~~~G~rvl~vA~~~~e~~l~~~Gli~l~Dp~R~~a~~aI~~l~~-aGI~v~miTGD~~~tA~~IA~~l---GI~~-~ 484 (755)
T TIGR01647 410 DELASRGYRALGVARTDEEGRWHFLGLLPLFDPPRHDTKETIERARH-LGVEVKMVTGDHLAIAKETARRL---GLGT-N 484 (755)
T ss_pred HHHHhCCCEEEEEEEEcCCCCcEEEEEeeccCCChhhHHHHHHHHHH-CCCeEEEECCCCHHHHHHHHHHc---CCCC-C
Confidence 344445567777655 33 4443222455678999999999977 59999999999999999888765 2210 0
Q ss_pred CEEEEeCCCceEEEcCCcCCccHHHHHHHHHHHHhccCCCeeEeeccceEEEeeccCCCccchHHHHHHHHHHHhHhcCC
Q 044635 641 GYFFRLRRDEEWETCIPVADCGWKQIAEPVMKLYTETTDGSTIEDKETALVWSYEDADPDFGSCQAKELLDHLESVLANE 720 (831)
Q Consensus 641 Ga~i~~~~~~~w~~~~~~~~~~w~~~v~~il~~~~e~~~gs~ie~k~~~l~~~~~~~d~~~~~~~a~el~~~L~~~l~~~ 720 (831)
+. .. + .+. .|.. .... . .++ +.+.+.+.
T Consensus 485 ---~~-----------~~------~---~l~-------~~~~-----------~~~~----~---~~~----~~~~~~~~ 512 (755)
T TIGR01647 485 ---IY-----------TA------D---VLL-------KGDN-----------RDDL----P---SGE----LGEMVEDA 512 (755)
T ss_pred ---Cc-----------CH------H---Hhc-------CCcc-----------hhhC----C---HHH----HHHHHHhC
Confidence 00 00 0 000 0000 0000 0 112 22222222
Q ss_pred CeEEEEcCeEEEEEeCCCCHHHHHHHHHHHhhhcCCCcccEEEEcCCchhHHHHHHcchhcCCCCCCCCCceEEEEeCCC
Q 044635 721 PVTVKSGQNLVEVKPQGVNKGLVAKRLLSTMQEREMLPDFVLCVGDDRSDEDMFEVIISSMAGPSIAPRAEVFACTVGRK 800 (831)
Q Consensus 721 ~v~v~~g~~~vEV~p~gvnKG~al~~Ll~~l~~~g~~~d~vla~GD~~NDe~Mf~~a~~~~~~~~~~~~~~~~~v~vG~~ 800 (831)
. -+-++.|. .|...++.+.+. | .-|.++||+.||.+.++.++ ++++||+.
T Consensus 513 ~-------vfAr~~Pe--~K~~iV~~lq~~----G---~~VamvGDGvNDapAL~~Ad--------------VGIAm~~g 562 (755)
T TIGR01647 513 D-------GFAEVFPE--HKYEIVEILQKR----G---HLVGMTGDGVNDAPALKKAD--------------VGIAVAGA 562 (755)
T ss_pred C-------EEEecCHH--HHHHHHHHHHhc----C---CEEEEEcCCcccHHHHHhCC--------------eeEEecCC
Confidence 1 23446676 498888887543 3 46999999999999999997 68888864
Q ss_pred ----CcccceEe--CChhHHHHHHH
Q 044635 801 ----PSKAKYYL--DDTVEIVRLMQ 819 (831)
Q Consensus 801 ----~s~A~y~l--~d~~eV~~~L~ 819 (831)
+..|+.++ ++...+..+++
T Consensus 563 tdvAkeaADivLl~d~l~~I~~ai~ 587 (755)
T TIGR01647 563 TDAARSAADIVLTEPGLSVIVDAIL 587 (755)
T ss_pred cHHHHHhCCEEEEcCChHHHHHHHH
Confidence 46788877 45666665554
No 216
>TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein. This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338).
Probab=94.02 E-value=0.08 Score=54.41 Aligned_cols=64 Identities=11% Similarity=0.027 Sum_probs=44.6
Q ss_pred CCCHHHHHHHHHHHhhhcCCCcccEEEEcCCchhHHHHHHcchhcCCCCCCCCCceEEEEeCCCCc---ccce--EeCCh
Q 044635 737 GVNKGLVAKRLLSTMQEREMLPDFVLCVGDDRSDEDMFEVIISSMAGPSIAPRAEVFACTVGRKPS---KAKY--YLDDT 811 (831)
Q Consensus 737 gvnKG~al~~Ll~~l~~~g~~~d~vla~GD~~NDe~Mf~~a~~~~~~~~~~~~~~~~~v~vG~~~s---~A~y--~l~d~ 811 (831)
+-.|...++.+. .. + ..++++||+.||++|++.++. +|++..||. .|+- .+.+.
T Consensus 130 ~~~K~~~l~~l~-~~---~---~~~v~vGDs~nDl~ml~~Ag~--------------~ia~~ak~~~~~~~~~~~~~~~~ 188 (203)
T TIGR02137 130 KDPKRQSVIAFK-SL---Y---YRVIAAGDSYNDTTMLSEAHA--------------GILFHAPENVIREFPQFPAVHTY 188 (203)
T ss_pred cchHHHHHHHHH-hh---C---CCEEEEeCCHHHHHHHHhCCC--------------CEEecCCHHHHHhCCCCCcccCH
Confidence 457888888874 33 3 369999999999999999984 566666643 2222 34567
Q ss_pred hHHHHHHHHH
Q 044635 812 VEIVRLMQGL 821 (831)
Q Consensus 812 ~eV~~~L~~L 821 (831)
++++..+..-
T Consensus 189 ~~~~~~~~~~ 198 (203)
T TIGR02137 189 EDLKREFLKA 198 (203)
T ss_pred HHHHHHHHHH
Confidence 7777666544
No 217
>TIGR01675 plant-AP plant acid phosphatase. This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases.
Probab=93.96 E-value=0.13 Score=53.63 Aligned_cols=58 Identities=14% Similarity=0.186 Sum_probs=44.3
Q ss_pred CceeEEecCCCccCCCCC-----------------------CCCCCCHHHHHHHHHHhhcCCCeEEEECCCCHhh---HH
Q 044635 572 TTRAILLDYDGTLMPQAS-----------------------IDKSPNSKTIDILNSLCRDKNNMVFLVSAKSRKT---LA 625 (831)
Q Consensus 572 ~~rli~~D~DGTLl~~~~-----------------------~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~---l~ 625 (831)
.+-++++|+|.|++...+ ....+-+.++++++.|.+ .|..|+++|||+... ..
T Consensus 76 g~~A~V~DIDET~LsN~py~~~~~~g~~~~~~~~~~~wv~~~~apaip~al~l~~~l~~-~G~~Vf~lTGR~e~~r~~T~ 154 (229)
T TIGR01675 76 GMDAWIFDVDDTLLSNIPYYKKHGYGTEKTDPTAFWLWLGKGAAPALPEGLKLYQKIIE-LGIKIFLLSGRWEELRNATL 154 (229)
T ss_pred CCcEEEEccccccccCHHHHHHhccCCCcCCHHHHHHHHHcCCCCCCHHHHHHHHHHHH-CCCEEEEEcCCChHHHHHHH
Confidence 567999999999997321 123456889999999977 699999999999765 55
Q ss_pred HHhCC
Q 044635 626 EWFSP 630 (831)
Q Consensus 626 ~~~~~ 630 (831)
+++..
T Consensus 155 ~nL~~ 159 (229)
T TIGR01675 155 DNLIN 159 (229)
T ss_pred HHHHH
Confidence 55543
No 218
>PLN02954 phosphoserine phosphatase
Probab=93.89 E-value=0.15 Score=52.95 Aligned_cols=66 Identities=12% Similarity=0.205 Sum_probs=47.8
Q ss_pred CCCCHHHHHHHHHHHhhhcCCCcccEEEEcCCchhHHHHHHcchhcCCCCCCCCCceEEEEeCCC------CcccceEeC
Q 044635 736 QGVNKGLVAKRLLSTMQEREMLPDFVLCVGDDRSDEDMFEVIISSMAGPSIAPRAEVFACTVGRK------PSKAKYYLD 809 (831)
Q Consensus 736 ~gvnKG~al~~Ll~~l~~~g~~~d~vla~GD~~NDe~Mf~~a~~~~~~~~~~~~~~~~~v~vG~~------~s~A~y~l~ 809 (831)
.+..|..+++++++.+ | .+++++|||+.||+.|.++++.. +.++.|.. ...|+|+++
T Consensus 152 ~~~~K~~~i~~~~~~~---~--~~~~i~iGDs~~Di~aa~~~~~~------------~~~~~~~~~~~~~~~~~~~~~i~ 214 (224)
T PLN02954 152 RSGGKAEAVQHIKKKH---G--YKTMVMIGDGATDLEARKPGGAD------------LFIGYGGVQVREAVAAKADWFVT 214 (224)
T ss_pred CCccHHHHHHHHHHHc---C--CCceEEEeCCHHHHHhhhcCCCC------------EEEecCCCccCHHHHhcCCEEEC
Confidence 3557999999988876 4 36899999999999996664421 33445531 235889999
Q ss_pred ChhHHHHHH
Q 044635 810 DTVEIVRLM 818 (831)
Q Consensus 810 d~~eV~~~L 818 (831)
+..++.++|
T Consensus 215 ~~~el~~~~ 223 (224)
T PLN02954 215 DFQDLIEVL 223 (224)
T ss_pred CHHHHHHhh
Confidence 998887764
No 219
>PF13844 Glyco_transf_41: Glycosyl transferase family 41; PDB: 3PE4_C 3PE3_D 3TAX_C 2XGO_A 2JLB_B 2XGM_A 2VSY_B 2XGS_B 2VSN_A.
Probab=93.79 E-value=0.58 Score=53.82 Aligned_cols=208 Identities=17% Similarity=0.111 Sum_probs=100.2
Q ss_pred eEEEcCEEEEEEEeecccChHHHHHhhCCcchHH--HHHHHHHHhc-cCCcEEEEeccCcccccCHHHHHHHHHHHHHhC
Q 044635 292 GLEYYGRTVSIKILPVGIHMGQLQSVLSLPGTEA--KVSELIKQFH-DQGKVMLLGVDDMDIFKGISLKLLAMEQLLIQH 368 (831)
Q Consensus 292 ~~~~~gr~~~i~v~P~GId~~~~~~~~~~~~~~~--~~~~lr~~~~-~~~~~iil~VdRld~~KGi~~~l~A~~~lL~~~ 368 (831)
....+|-.+ -+|.-..+....+...+... .+..-|++|| +.+..++.+..++ .|=-+..+..+.++|++-
T Consensus 240 ~~~~~~~~~-----~~~~~~~~~~~~~~~g~~~~~~~v~~~R~~~gLp~d~vvF~~fn~~--~KI~p~~l~~W~~IL~~v 312 (468)
T PF13844_consen 240 QTSVNGVVV-----QNGLATTQTNNKAATGEEVPQNIVVTTRAQYGLPEDAVVFGSFNNL--FKISPETLDLWARILKAV 312 (468)
T ss_dssp EEEETTEEE-----EECCGHHHH-HHHHTTSS--SSEEEEETGGGT--SSSEEEEE-S-G--GG--HHHHHHHHHHHHHS
T ss_pred eEeECCEEe-----ecccchhhhhccccCCccCCccccccCHHHcCCCCCceEEEecCcc--ccCCHHHHHHHHHHHHhC
Confidence 444555433 46776666553332221111 1123467888 7777777777876 566789999999999999
Q ss_pred CCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhccCCCCCCccEEEecCCCCHHHHHHHHHHcCEeEECCCccCC
Q 044635 369 PEWQGKVVLVQIANPARGRGKDVKEVQAETYSTVERINQTFGKPGYDPVVLIDEPLKFYERIAYYVVAECCLVTAVRDGS 448 (831)
Q Consensus 369 P~~~~~vvLvqig~p~r~~~~~~~~l~~~i~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv~vvtS~~eGm 448 (831)
|+-+ |++...|. .+ ++.+.+.+.+ .|- +-..++|. +..+.+|..+.|+.+|||+-|..+-|-
T Consensus 313 P~S~----L~L~~~~~--~~------~~~l~~~~~~----~Gv-~~~Ri~f~-~~~~~~ehl~~~~~~DI~LDT~p~nG~ 374 (468)
T PF13844_consen 313 PNSR----LWLLRFPA--SG------EARLRRRFAA----HGV-DPDRIIFS-PVAPREEHLRRYQLADICLDTFPYNGG 374 (468)
T ss_dssp TTEE----EEEEETST--TH------HHHHHHHHHH----TTS--GGGEEEE-E---HHHHHHHGGG-SEEE--SSS--S
T ss_pred CCcE----EEEeeCCH--HH------HHHHHHHHHH----cCC-ChhhEEEc-CCCCHHHHHHHhhhCCEEeeCCCCCCc
Confidence 9865 76666543 11 1223333332 233 23346654 467889999999999999999888775
Q ss_pred --CCCCCCCceEEEeccccc------cccc-----CCCceeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHhhhhc---c
Q 044635 449 --EPSSPKKSMLVVSEFIGC------SPSL-----SGAIRVNPWNIDAVSDAMDSALEMADQEKQLRHEKHYRYVS---T 512 (831)
Q Consensus 449 --a~~~~~~g~lVlSe~~G~------~~~l-----~~allVnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~---~ 512 (831)
++++--.|++|++=-+-. +..| .+.+-- |.++..+.-.++-+. .+.++...+++++.+. -
T Consensus 375 TTt~dALwmGVPvVTl~G~~~~sR~~aSiL~~lGl~ElIA~---s~~eYv~~Av~La~D-~~~l~~lR~~Lr~~~~~SpL 450 (468)
T PF13844_consen 375 TTTLDALWMGVPVVTLPGETMASRVGASILRALGLPELIAD---SEEEYVEIAVRLATD-PERLRALRAKLRDRRSKSPL 450 (468)
T ss_dssp HHHHHHHHHT--EEB---SSGGGSHHHHHHHHHT-GGGB-S---SHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHSGG
T ss_pred HHHHHHHHcCCCEEeccCCCchhHHHHHHHHHcCCchhcCC---CHHHHHHHHHHHhCC-HHHHHHHHHHHHHHHhhCCC
Confidence 222222366777622110 0111 122222 344444433333333 3333333344444432 2
Q ss_pred CCHHHHHHHHHHHHHH
Q 044635 513 HDVGYWARSFLQDLER 528 (831)
Q Consensus 513 ~~~~~W~~~~l~~l~~ 528 (831)
.+...|+++|-..+.+
T Consensus 451 fd~~~~ar~lE~a~~~ 466 (468)
T PF13844_consen 451 FDPKRFARNLEAAYRQ 466 (468)
T ss_dssp G-HHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHH
Confidence 5677777766655554
No 220
>TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein. The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity.
Probab=93.79 E-value=0.16 Score=51.85 Aligned_cols=66 Identities=15% Similarity=0.251 Sum_probs=53.4
Q ss_pred HHHHHHHHHHHhhhcCCCcccEEEEcCCchhHHHHHHcchhcCCCCCCCCCceEEEEeCCC------CcccceEeCChhH
Q 044635 740 KGLVAKRLLSTMQEREMLPDFVLCVGDDRSDEDMFEVIISSMAGPSIAPRAEVFACTVGRK------PSKAKYYLDDTVE 813 (831)
Q Consensus 740 KG~al~~Ll~~l~~~g~~~d~vla~GD~~NDe~Mf~~a~~~~~~~~~~~~~~~~~v~vG~~------~s~A~y~l~d~~e 813 (831)
|...++.+++.+ |++++++++|||+.+|+.+-+.+|.. .++|+-|.. ...|+|.+++..+
T Consensus 133 ~~~~~~~~~~~~---~~~~~~~l~igD~~~Di~aA~~~Gi~-----------~i~~~~g~~~~~~l~~~~~~~~~~~~~~ 198 (205)
T TIGR01454 133 APDIVREALRLL---DVPPEDAVMVGDAVTDLASARAAGTA-----------TVAALWGEGDAGELLAARPDFLLRKPQS 198 (205)
T ss_pred ChHHHHHHHHHc---CCChhheEEEcCCHHHHHHHHHcCCe-----------EEEEEecCCChhhhhhcCCCeeeCCHHH
Confidence 567778888887 89999999999999999999999852 356776642 3468899999999
Q ss_pred HHHHHH
Q 044635 814 IVRLMQ 819 (831)
Q Consensus 814 V~~~L~ 819 (831)
+..+++
T Consensus 199 l~~~~~ 204 (205)
T TIGR01454 199 LLALCR 204 (205)
T ss_pred HHHHhh
Confidence 987764
No 221
>PF08645 PNK3P: Polynucleotide kinase 3 phosphatase; InterPro: IPR013954 Polynucleotide kinase 3 phosphatases play a role in the repair of single breaks in DNA induced by DNA-damaging agents such as gamma radiation and camptothecin []. ; PDB: 2FPW_A 2FPR_A 2FPX_A 2FPS_A 2FPU_B 3ZVM_A 1YJ5_A 3ZVL_A 3U7E_B 3U7G_A ....
Probab=93.75 E-value=0.055 Score=53.34 Aligned_cols=44 Identities=25% Similarity=0.326 Sum_probs=30.6
Q ss_pred eeEEecCCCccCCCCCCCC---------CCCHHHHHHHHHHhhcCCCeEEEECC
Q 044635 574 RAILLDYDGTLMPQASIDK---------SPNSKTIDILNSLCRDKNNMVFLVSA 618 (831)
Q Consensus 574 rli~~D~DGTLl~~~~~~~---------~~s~~~~~~L~~L~~d~g~~V~I~SG 618 (831)
|+.++|+||||+...+... -..+.+.++|++|.+ .|..++|+|-
T Consensus 1 Kia~fD~DgTLi~~~s~~~f~~~~~D~~~~~~~v~~~L~~l~~-~Gy~IvIvTN 53 (159)
T PF08645_consen 1 KIAFFDLDGTLIKTKSGKKFPKDPDDWKFFPPGVPEALRELHK-KGYKIVIVTN 53 (159)
T ss_dssp SEEEE-SCTTTEE-STSTTS-SSTCGGEEC-TTHHHHHHHHHH-TTEEEEEEEE
T ss_pred CEEEEeCCCCccCCCCCCcCcCCHHHhhhcchhHHHHHHHHHh-cCCeEEEEeC
Confidence 6899999999997543111 124579999999976 5888888873
No 222
>TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA. Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant.
Probab=93.70 E-value=0.088 Score=55.40 Aligned_cols=50 Identities=32% Similarity=0.416 Sum_probs=40.0
Q ss_pred EEecCCCccCCCCCCCCCCCHHHHHHHHHHhhcCCCeEEEEC---CCCHhhHHHHhCC
Q 044635 576 ILLDYDGTLMPQASIDKSPNSKTIDILNSLCRDKNNMVFLVS---AKSRKTLAEWFSP 630 (831)
Q Consensus 576 i~~D~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~S---GR~~~~l~~~~~~ 630 (831)
++||+||||++ ... +-+.+.++|+.|.+ .|..++++| ||+...+.+.+..
T Consensus 1 ~lfD~DGvL~~---~~~-~~~~a~e~i~~l~~-~g~~~~~~tN~~~~~~~~~~~~l~~ 53 (236)
T TIGR01460 1 FLFDIDGVLWL---GHK-PIPGAAEALNRLRA-KGKPVVFLTNNSSRSEEDYAEKLSS 53 (236)
T ss_pred CEEeCcCccCc---CCc-cCcCHHHHHHHHHH-CCCeEEEEECCCCCCHHHHHHHHHH
Confidence 58999999998 344 44588999999976 588898886 9999987776654
No 223
>COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=93.66 E-value=0.42 Score=60.26 Aligned_cols=41 Identities=15% Similarity=0.325 Sum_probs=34.8
Q ss_pred CCCCCCHHHHHHHHHHhhcCCCeEEEECCCCHhhHHHHhCCC
Q 044635 590 IDKSPNSKTIDILNSLCRDKNNMVFLVSAKSRKTLAEWFSPC 631 (831)
Q Consensus 590 ~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~~ 631 (831)
...+|-+++.++++.|.+ .|++++++||=.......+-+++
T Consensus 544 ~~Dppr~~v~~aI~~l~~-AGI~v~MiTGD~~~TA~aIa~~~ 584 (917)
T COG0474 544 IEDPPREDVKEAIEELRE-AGIKVWMITGDHVETAIAIAKEC 584 (917)
T ss_pred ccCCCCccHHHHHHHHHH-CCCcEEEECCCCHHHHHHHHHHc
Confidence 344577899999999877 59999999999999998888765
No 224
>TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702).
Probab=93.55 E-value=0.13 Score=52.83 Aligned_cols=64 Identities=17% Similarity=0.108 Sum_probs=49.7
Q ss_pred HHHHHHHHHHHhhhcCCCcccEEEEcCCchhHHHHHHcchhcCCCCCCCCCceEEEEeCCC------CcccceEeCChhH
Q 044635 740 KGLVAKRLLSTMQEREMLPDFVLCVGDDRSDEDMFEVIISSMAGPSIAPRAEVFACTVGRK------PSKAKYYLDDTVE 813 (831)
Q Consensus 740 KG~al~~Ll~~l~~~g~~~d~vla~GD~~NDe~Mf~~a~~~~~~~~~~~~~~~~~v~vG~~------~s~A~y~l~d~~e 813 (831)
+-.++.++++.+ |++++++++|||+.+|+.+-+.+|.. .+.|.-|.. ...|+|++++..+
T Consensus 143 ~p~~~~~~~~~~---~~~~~~~~~igDs~~d~~aa~~aG~~-----------~i~v~~g~~~~~~l~~~~a~~~i~~~~~ 208 (213)
T TIGR01449 143 HPDPLLLAAERL---GVAPQQMVYVGDSRVDIQAARAAGCP-----------SVLLTYGYRYGEAIDLLPPDVLYDSLNE 208 (213)
T ss_pred ChHHHHHHHHHc---CCChhHeEEeCCCHHHHHHHHHCCCe-----------EEEEccCCCCCcchhhcCCCeEeCCHHH
Confidence 456788888888 89999999999999999999999852 234444532 2468899999988
Q ss_pred HHHH
Q 044635 814 IVRL 817 (831)
Q Consensus 814 V~~~ 817 (831)
+..+
T Consensus 209 l~~~ 212 (213)
T TIGR01449 209 LPPL 212 (213)
T ss_pred HHhh
Confidence 7664
No 225
>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)
Probab=93.44 E-value=0.097 Score=55.24 Aligned_cols=54 Identities=19% Similarity=0.322 Sum_probs=41.6
Q ss_pred CceeEEecCCCccCCCCCCCCCCCHHHHHHHHHHhhcCCCeEEEECCCCHhhHH--HHhCC
Q 044635 572 TTRAILLDYDGTLMPQASIDKSPNSKTIDILNSLCRDKNNMVFLVSAKSRKTLA--EWFSP 630 (831)
Q Consensus 572 ~~rli~~D~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~--~~~~~ 630 (831)
+.+++++|+||||.. ...+-+.+.++|++|.+ .|..++|+|..++.... +.+..
T Consensus 7 ~~~~~~~D~dG~l~~----~~~~~pga~e~L~~L~~-~G~~~~ivTN~~~~~~~~~~~L~~ 62 (242)
T TIGR01459 7 DYDVFLLDLWGVIID----GNHTYPGAVQNLNKIIA-QGKPVYFVSNSPRNIFSLHKTLKS 62 (242)
T ss_pred cCCEEEEeccccccc----CCccCccHHHHHHHHHH-CCCEEEEEeCCCCChHHHHHHHHH
Confidence 467999999999997 34567999999999987 59999999776654333 44443
No 226
>TIGR03568 NeuC_NnaA UDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing. This family of enzymes catalyzes the combined epimerization and UDP-hydrolysis of UDP-N-acetylglucosamine to N-acetylmannosamine. This is in contrast to the related enzyme WecB (TIGR00236) which retains the UDP moiety. NeuC acts in concert with NeuA and NeuB to synthesize CMP-N5-acetyl-neuraminate.
Probab=93.39 E-value=4.7 Score=45.33 Aligned_cols=68 Identities=12% Similarity=0.144 Sum_probs=44.6
Q ss_pred EEecCCCCHHHHHHHHHHcCEeEECC---CccCCCCCCCCCceEEEeccccccccc-C---CCceeCCCCHHHHHHHHHH
Q 044635 418 VLIDEPLKFYERIAYYVVAECCLVTA---VRDGSEPSSPKKSMLVVSEFIGCSPSL-S---GAIRVNPWNIDAVSDAMDS 490 (831)
Q Consensus 418 ~~~~~~v~~~el~aly~~ADv~vvtS---~~eGma~~~~~~g~lVlSe~~G~~~~l-~---~allVnP~d~~~~A~ai~~ 490 (831)
+.+.++++..++.++++.|+++|-.| ..|..++ |+++++ .|--++. . +.++| +.|++++.+++.+
T Consensus 264 v~l~~~l~~~~~l~Ll~~a~~vitdSSggi~EA~~l-----g~Pvv~--l~~R~e~~~~g~nvl~v-g~~~~~I~~a~~~ 335 (365)
T TIGR03568 264 FRLFKSLGQERYLSLLKNADAVIGNSSSGIIEAPSF-----GVPTIN--IGTRQKGRLRADSVIDV-DPDKEEIVKAIEK 335 (365)
T ss_pred EEEECCCChHHHHHHHHhCCEEEEcChhHHHhhhhc-----CCCEEe--ecCCchhhhhcCeEEEe-CCCHHHHHHHHHH
Confidence 34567899999999999999988665 2333333 333332 2223333 2 22447 6789999999999
Q ss_pred Hhc
Q 044635 491 ALE 493 (831)
Q Consensus 491 aL~ 493 (831)
++.
T Consensus 336 ~~~ 338 (365)
T TIGR03568 336 LLD 338 (365)
T ss_pred HhC
Confidence 653
No 227
>COG0381 WecB UDP-N-acetylglucosamine 2-epimerase [Cell envelope biogenesis, outer membrane]
Probab=93.38 E-value=9.6 Score=42.58 Aligned_cols=137 Identities=18% Similarity=0.232 Sum_probs=82.2
Q ss_pred CCcEEEEeccCcccc-cCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhccCCCCCCc
Q 044635 337 QGKVMLLGVDDMDIF-KGISLKLLAMEQLLIQHPEWQGKVVLVQIANPARGRGKDVKEVQAETYSTVERINQTFGKPGYD 415 (831)
Q Consensus 337 ~~~~iil~VdRld~~-KGi~~~l~A~~~lL~~~P~~~~~vvLvqig~p~r~~~~~~~~l~~~i~~lv~~IN~~~g~~~~~ 415 (831)
..+.+++..=|-.-. +++...+.|+.++++++|+.. +|.-..| | +.+++.. +.+++.. .
T Consensus 203 ~~~~iLvT~HRreN~~~~~~~i~~al~~i~~~~~~~~----viyp~H~-~---~~v~e~~----------~~~L~~~--~ 262 (383)
T COG0381 203 DKKYILVTAHRRENVGEPLEEICEALREIAEEYPDVI----VIYPVHP-R---PRVRELV----------LKRLKNV--E 262 (383)
T ss_pred cCcEEEEEcchhhcccccHHHHHHHHHHHHHhCCCce----EEEeCCC-C---hhhhHHH----------HHHhCCC--C
Confidence 345677777787766 999999999999999998764 3322222 1 2222221 1122221 1
Q ss_pred cEEEecCCCCHHHHHHHHHHcCEeEECCCccCCCCCCCCCc--eEEEecccccccccC--CCceeCCCCHHHHHHHHHHH
Q 044635 416 PVVLIDEPLKFYERIAYYVVAECCLVTAVRDGSEPSSPKKS--MLVVSEFIGCSPSLS--GAIRVNPWNIDAVSDAMDSA 491 (831)
Q Consensus 416 pv~~~~~~v~~~el~aly~~ADv~vvtS~~eGma~~~~~~g--~lVlSe~~G~~~~l~--~allVnP~d~~~~A~ai~~a 491 (831)
.|+++ .++...+...|...|-+.+--| -|+-.++..-| ++++=+.+--.+.+. +.++|+ .|.+.+.+++.++
T Consensus 263 ~v~li-~pl~~~~f~~L~~~a~~iltDS--GgiqEEAp~lg~Pvl~lR~~TERPE~v~agt~~lvg-~~~~~i~~~~~~l 338 (383)
T COG0381 263 RVKLI-DPLGYLDFHNLMKNAFLILTDS--GGIQEEAPSLGKPVLVLRDTTERPEGVEAGTNILVG-TDEENILDAATEL 338 (383)
T ss_pred cEEEe-CCcchHHHHHHHHhceEEEecC--CchhhhHHhcCCcEEeeccCCCCccceecCceEEeC-ccHHHHHHHHHHH
Confidence 35554 4899999999999996655433 34411121123 333434443333342 335565 4789999999999
Q ss_pred hcCCHH
Q 044635 492 LEMADQ 497 (831)
Q Consensus 492 L~m~~~ 497 (831)
++++..
T Consensus 339 l~~~~~ 344 (383)
T COG0381 339 LEDEEF 344 (383)
T ss_pred hhChHH
Confidence 986644
No 228
>TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490. A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog.
Probab=93.32 E-value=0.089 Score=53.58 Aligned_cols=42 Identities=19% Similarity=0.170 Sum_probs=36.9
Q ss_pred CCCCHHHHHHHHHHHhhhcCCCcccEEEEcCCchhHHHHHHcchh
Q 044635 736 QGVNKGLVAKRLLSTMQEREMLPDFVLCVGDDRSDEDMFEVIISS 780 (831)
Q Consensus 736 ~gvnKG~al~~Ll~~l~~~g~~~d~vla~GD~~NDe~Mf~~a~~~ 780 (831)
.+-.|..+++.+++.. +++++.++++|||.+|++|++.++..
T Consensus 152 ~g~~K~~~l~~~~~~~---~~~~~~~~~~gDs~~D~~~~~~a~~~ 193 (202)
T TIGR01490 152 KGEGKVHALAELLAEE---QIDLKDSYAYGDSISDLPLLSLVGHP 193 (202)
T ss_pred CChHHHHHHHHHHHHc---CCCHHHcEeeeCCcccHHHHHhCCCc
Confidence 4567888899988876 88899999999999999999999864
No 229
>TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC. The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily.
Probab=93.08 E-value=0.48 Score=55.64 Aligned_cols=61 Identities=10% Similarity=0.125 Sum_probs=42.8
Q ss_pred hcCceeEEecCCCccCCCCCCCCCCCHHHHHHHHHHhhcCCCeEEEECCCCHhhHHHHhCCC
Q 044635 570 RTTTRAILLDYDGTLMPQASIDKSPNSKTIDILNSLCRDKNNMVFLVSAKSRKTLAEWFSPC 631 (831)
Q Consensus 570 ~s~~rli~~D~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~~ 631 (831)
....+.+++=++++++..-.....+-+++.++++.|.+ .|..++++||.........-..+
T Consensus 324 ~~g~~~~~~a~~~~~~g~i~l~d~lr~~~~~~i~~l~~-~gi~~~~ltGD~~~~a~~ia~~l 384 (499)
T TIGR01494 324 QSGLRVLAVASKETLLGLLGLEDPLRDDAKETISELRE-AGIRVIMLTGDNVLTAKAIAKEL 384 (499)
T ss_pred hCCCEEEEEEECCeEEEEEEecCCCchhHHHHHHHHHH-CCCeEEEEcCCCHHHHHHHHHHc
Confidence 34445555556666654222344567888888888876 58999999999999888877654
No 230
>PLN03190 aminophospholipid translocase; Provisional
Probab=93.06 E-value=0.94 Score=58.38 Aligned_cols=39 Identities=10% Similarity=0.101 Sum_probs=33.0
Q ss_pred CCCCCHHHHHHHHHHhhcCCCeEEEECCCCHhhHHHHhCC
Q 044635 591 DKSPNSKTIDILNSLCRDKNNMVFLVSAKSRKTLAEWFSP 630 (831)
Q Consensus 591 ~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~ 630 (831)
...+-+.+.+++++|.+ .|+.|+++||-.......+...
T Consensus 724 ~D~lr~~v~~~I~~l~~-agi~v~mlTGD~~~tAi~IA~s 762 (1178)
T PLN03190 724 EDKLQQGVPEAIESLRT-AGIKVWVLTGDKQETAISIGYS 762 (1178)
T ss_pred ecCCchhHHHHHHHHHH-CCCEEEEECCCCHHHHHHHHHH
Confidence 45678899999999976 5999999999999988877654
No 231
>PRK13582 thrH phosphoserine phosphatase; Provisional
Probab=92.94 E-value=0.17 Score=51.69 Aligned_cols=64 Identities=16% Similarity=0.126 Sum_probs=43.2
Q ss_pred CCHHHHHHHHHHHhhhcCCCcccEEEEcCCchhHHHHHHcchhcCCCCCCCCCceEEEEeCCCC----cccce-EeCChh
Q 044635 738 VNKGLVAKRLLSTMQEREMLPDFVLCVGDDRSDEDMFEVIISSMAGPSIAPRAEVFACTVGRKP----SKAKY-YLDDTV 812 (831)
Q Consensus 738 vnKG~al~~Ll~~l~~~g~~~d~vla~GD~~NDe~Mf~~a~~~~~~~~~~~~~~~~~v~vG~~~----s~A~y-~l~d~~ 812 (831)
-.|..+++.+. ..++.+++|||+.||++|.++++. +|.++... ..+.+ .+++..
T Consensus 131 ~~k~~~l~~~~-------~~~~~~v~iGDs~~D~~~~~aa~~--------------~v~~~~~~~~~~~~~~~~~~~~~~ 189 (205)
T PRK13582 131 DGKRQAVKALK-------SLGYRVIAAGDSYNDTTMLGEADA--------------GILFRPPANVIAEFPQFPAVHTYD 189 (205)
T ss_pred chHHHHHHHHH-------HhCCeEEEEeCCHHHHHHHHhCCC--------------CEEECCCHHHHHhCCcccccCCHH
Confidence 34655555442 234789999999999999999973 34444431 23454 678898
Q ss_pred HHHHHHHHHH
Q 044635 813 EIVRLMQGLA 822 (831)
Q Consensus 813 eV~~~L~~L~ 822 (831)
+++..|....
T Consensus 190 el~~~l~~~~ 199 (205)
T PRK13582 190 ELLAAIDKAS 199 (205)
T ss_pred HHHHHHHHHH
Confidence 8887776643
No 232
>KOG0210 consensus P-type ATPase [Inorganic ion transport and metabolism]
Probab=92.75 E-value=0.78 Score=53.76 Aligned_cols=173 Identities=16% Similarity=0.175 Sum_probs=91.0
Q ss_pred CCCCHHHHHHHHHHhhcCCCeEEEECCCCHhhHHHHhCCCCCceEEecCCEEEEeCCCceEEEcCCcCCccHHHHHHHHH
Q 044635 592 KSPNSKTIDILNSLCRDKNNMVFLVSAKSRKTLAEWFSPCENLGIAAEHGYFFRLRRDEEWETCIPVADCGWKQIAEPVM 671 (831)
Q Consensus 592 ~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~~~~~~liaenGa~i~~~~~~~w~~~~~~~~~~w~~~v~~il 671 (831)
.+..+.+...|+-|++ .|++|+..||--.+...-+.. ...++.-+-.+. .+.. ..-+..+..-+
T Consensus 657 DkLQ~dVk~tLElLRN-AgikiWMLTGDKlETA~ciAk---Ss~L~sR~q~ih----------v~~~--v~sr~dah~eL 720 (1051)
T KOG0210|consen 657 DKLQDDVKPTLELLRN-AGIKIWMLTGDKLETAICIAK---SSRLFSRGQYIH----------VIRS--VTSRGDAHNEL 720 (1051)
T ss_pred HHHhhhhHhHHHHHhh-cCcEEEEEcCcchhheeeeeh---hccceecCceEE----------EEEe--cCCchHHHHHH
Confidence 3455677778888866 599999999987766432221 122222111111 1110 01123344455
Q ss_pred HHHhccCCCeeEeeccceEEEeeccCCCccchHHHHHHHHHHHhHhcCCCeEEEEcCeEEEEEeCCCCHHHHHHHHHHHh
Q 044635 672 KLYTETTDGSTIEDKETALVWSYEDADPDFGSCQAKELLDHLESVLANEPVTVKSGQNLVEVKPQGVNKGLVAKRLLSTM 751 (831)
Q Consensus 672 ~~~~e~~~gs~ie~k~~~l~~~~~~~d~~~~~~~a~el~~~L~~~l~~~~v~v~~g~~~vEV~p~gvnKG~al~~Ll~~l 751 (831)
+.+...++.+.+-..+ ++.+ ..+-..+++-++....+..+. .+-...-|+..++.|-++-
T Consensus 721 ~~lR~k~~~aLvi~G~-Sl~~------------cl~yye~Ef~el~~~~~aVv~-------CRctPtQKA~v~~llq~~t 780 (1051)
T KOG0210|consen 721 NNLRRKTDCALVIDGE-SLEF------------CLKYYEDEFIELVCELPAVVC-------CRCTPTQKAQVVRLLQKKT 780 (1051)
T ss_pred HHhhcCCCcEEEEcCc-hHHH------------HHHHHHHHHHHHHHhcCcEEE-------EecChhHHHHHHHHHHHhh
Confidence 5554444333332211 1110 112222223232222232222 2333345888887776653
Q ss_pred hhcCCCcccEEEEcCCchhHHHHHHcchhcCCCCCCCCCceEEEEeCC----CCcccceEeCChhHHHHHHH
Q 044635 752 QEREMLPDFVLCVGDDRSDEDMFEVIISSMAGPSIAPRAEVFACTVGR----KPSKAKYYLDDTVEIVRLMQ 819 (831)
Q Consensus 752 ~~~g~~~d~vla~GD~~NDe~Mf~~a~~~~~~~~~~~~~~~~~v~vG~----~~s~A~y~l~d~~eV~~~L~ 819 (831)
| ..|.||||+.||..|++.++-. +|+ +|+ +.-+|+|.+.....|-++|-
T Consensus 781 ---~---krvc~IGDGGNDVsMIq~A~~G------------iGI-~gkEGkQASLAADfSItqF~Hv~rLLl 833 (1051)
T KOG0210|consen 781 ---G---KRVCAIGDGGNDVSMIQAADVG------------IGI-VGKEGKQASLAADFSITQFSHVSRLLL 833 (1051)
T ss_pred ---C---ceEEEEcCCCccchheeecccc------------eee-ecccccccchhccccHHHHHHHHHHhh
Confidence 3 6799999999999999998742 333 343 23478888876666666664
No 233
>TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase. Note that the EC number for the kinase function is: 2.7.1.78
Probab=92.69 E-value=0.12 Score=60.58 Aligned_cols=50 Identities=14% Similarity=0.139 Sum_probs=38.2
Q ss_pred cCceeEEecCCCccCCCCCCC---------CCCCHHHHHHHHHHhhcCCCeEEEECCCCH
Q 044635 571 TTTRAILLDYDGTLMPQASID---------KSPNSKTIDILNSLCRDKNNMVFLVSAKSR 621 (831)
Q Consensus 571 s~~rli~~D~DGTLl~~~~~~---------~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~ 621 (831)
.+.|+++||+||||....+.. ..+-+.+.++|++|.+ .|..++|+|..+.
T Consensus 166 ~~~Kia~fD~DGTLi~t~sg~~~~~~~~d~~~l~pgV~e~L~~L~~-~Gy~IvIvTNQ~g 224 (526)
T TIGR01663 166 GQEKIAGFDLDGTIIKTKSGKVFPKGPDDWQIIFPEIPEKLKELEA-DGFKICIFTNQGG 224 (526)
T ss_pred ccCcEEEEECCCCccccCCCccCCCCHHHeeecccCHHHHHHHHHH-CCCEEEEEECCcc
Confidence 457999999999999743211 1235788999999977 5999999987554
No 234
>PLN02919 haloacid dehalogenase-like hydrolase family protein
Probab=92.67 E-value=0.74 Score=58.92 Aligned_cols=61 Identities=8% Similarity=-0.052 Sum_probs=45.6
Q ss_pred HHHHHHHHHHHhhhcCCCcccEEEEcCCchhHHHHHHcchhcCCCCCCCCCceEEEEeCCC-----CcccceEeCChhHH
Q 044635 740 KGLVAKRLLSTMQEREMLPDFVLCVGDDRSDEDMFEVIISSMAGPSIAPRAEVFACTVGRK-----PSKAKYYLDDTVEI 814 (831)
Q Consensus 740 KG~al~~Ll~~l~~~g~~~d~vla~GD~~NDe~Mf~~a~~~~~~~~~~~~~~~~~v~vG~~-----~s~A~y~l~d~~eV 814 (831)
+......+++.+ |++++++++|||+.+|+..-+.+|.. .++|.-|.. ...|.+.+++..++
T Consensus 220 ~Pe~~~~a~~~l---gv~p~e~v~IgDs~~Di~AA~~aGm~-----------~I~v~~~~~~~~L~~~~a~~vi~~l~el 285 (1057)
T PLN02919 220 APDIFLAAAKIL---GVPTSECVVIEDALAGVQAARAAGMR-----------CIAVTTTLSEEILKDAGPSLIRKDIGNI 285 (1057)
T ss_pred CHHHHHHHHHHc---CcCcccEEEEcCCHHHHHHHHHcCCE-----------EEEECCCCCHHHHhhCCCCEEECChHHC
Confidence 356677788887 89999999999999999988888742 244443421 34677888988886
No 235
>PF13242 Hydrolase_like: HAD-hyrolase-like; PDB: 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A 2HX1_D 2X4D_A 3HLT_C 3L1U_B ....
Probab=92.38 E-value=0.38 Score=40.79 Aligned_cols=57 Identities=21% Similarity=0.279 Sum_probs=42.6
Q ss_pred HHHHHHHHhhhcCCCcccEEEEcCC-chhHHHHHHcchhcCCCCCCCCCceEEEEeCCC--------CcccceEeCChhH
Q 044635 743 VAKRLLSTMQEREMLPDFVLCVGDD-RSDEDMFEVIISSMAGPSIAPRAEVFACTVGRK--------PSKAKYYLDDTVE 813 (831)
Q Consensus 743 al~~Ll~~l~~~g~~~d~vla~GD~-~NDe~Mf~~a~~~~~~~~~~~~~~~~~v~vG~~--------~s~A~y~l~d~~e 813 (831)
.++.+++.+ +++++++++|||+ .+|+.+=+.+|.. .+.|.-|.. ...++|++++..|
T Consensus 9 ~~~~a~~~~---~~~~~~~~~VGD~~~~Di~~a~~~G~~-----------~ilV~tG~~~~~~~~~~~~~pd~vv~~l~e 74 (75)
T PF13242_consen 9 MLEQALKRL---GVDPSRCVMVGDSLETDIEAAKAAGID-----------TILVLTGVYSPEDLEKAEHKPDYVVDDLKE 74 (75)
T ss_dssp HHHHHHHHH---TSGGGGEEEEESSTTTHHHHHHHTTSE-----------EEEESSSSSCCCGHHHSSSTTSEEESSGGG
T ss_pred HHHHHHHHc---CCCHHHEEEEcCCcHhHHHHHHHcCCc-----------EEEECCCCCCHHHHhccCCCCCEEECCHHh
Confidence 456667776 8899999999999 9999999999852 234444542 2478888888765
No 236
>PF13439 Glyco_transf_4: Glycosyltransferase Family 4; PDB: 2JJM_E 3MBO_C 2GEJ_A 2GEK_A.
Probab=92.21 E-value=0.031 Score=54.49 Aligned_cols=96 Identities=17% Similarity=0.268 Sum_probs=48.4
Q ss_pred HHHcCCCCCEEEEeCccccchHHHHHhhcCCCeEEEEEeccCCChHHhhcCCCh-----HHHHHH-HhcCCeEeecCHHh
Q 044635 195 MEVINPEDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYKTLPIR-----EEILRA-LLNSDLIGFHTFDY 268 (831)
Q Consensus 195 ~~~~~~~~d~vwvhDyhL~llp~~lr~~~~~~~i~~flH~PfP~~e~f~~lp~r-----~eil~~-ll~~dligf~t~~~ 268 (831)
++..++ |+|++|.++...+...... +.++.+++|.+++.........+. ..+.+. .-.+|.+-.-+..-
T Consensus 76 i~~~~~--DiVh~~~~~~~~~~~~~~~---~~~~v~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ii~vS~~~ 150 (177)
T PF13439_consen 76 IKKEKP--DIVHIHGPPAFWIALLACR---KVPIVYTIHGPYFERRFLKSKLSPYSYLNFRIERKLYKKADRIIAVSEST 150 (177)
T ss_dssp HHHHT---SEEECCTTHCCCHHHHHHH---CSCEEEEE-HHH--HHTTTTSCCCHHHHHHCTTHHHHCCSSEEEESSHHH
T ss_pred HHHcCC--CeEEecccchhHHHHHhcc---CCCEEEEeCCCcccccccccccchhhhhhhhhhhhHHhcCCEEEEECHHH
Confidence 343455 8999999888765544333 889999999988531111111111 111111 24578777666655
Q ss_pred HHHHHHHHHHHhCCeecccCceeeEEEcCEEEEEEEeecccChHHHH
Q 044635 269 ARHFLSCCSRMLGLTYESKRGYIGLEYYGRTVSIKILPVGIHMGQLQ 315 (831)
Q Consensus 269 ~~~Fl~~~~r~l~~~~~~~~~~~~~~~~gr~~~i~v~P~GId~~~~~ 315 (831)
.+.+.+ .|. ...++.++|+|||.+.|+
T Consensus 151 ~~~l~~-----~~~---------------~~~ki~vI~ngid~~~F~ 177 (177)
T PF13439_consen 151 KDELIK-----FGI---------------PPEKIHVIYNGIDTDRFR 177 (177)
T ss_dssp HHHHHH-----HT-----------------SS-EEE----B-CCCH-
T ss_pred HHHHHH-----hCC---------------cccCCEEEECCccHHHcC
Confidence 554443 121 124788999999998873
No 237
>TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal. This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog.
Probab=92.19 E-value=0.29 Score=49.48 Aligned_cols=35 Identities=11% Similarity=-0.073 Sum_probs=27.6
Q ss_pred HHHHHHHHHHhhcCCCeEEEECCCCHhhHHHHhCCC
Q 044635 596 SKTIDILNSLCRDKNNMVFLVSAKSRKTLAEWFSPC 631 (831)
Q Consensus 596 ~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~~ 631 (831)
+.+.++|+.|.+ .|..++|+||.....++.+++.+
T Consensus 83 ~g~~e~l~~l~~-~g~~~~IvS~~~~~~~~~~l~~~ 117 (201)
T TIGR01491 83 DYAEELVRWLKE-KGLKTAIVSGGIMCLAKKVAEKL 117 (201)
T ss_pred ccHHHHHHHHHH-CCCEEEEEeCCcHHHHHHHHHHh
Confidence 345677788866 59999999999998888887654
No 238
>PLN02954 phosphoserine phosphatase
Probab=92.06 E-value=0.23 Score=51.51 Aligned_cols=36 Identities=19% Similarity=0.225 Sum_probs=28.6
Q ss_pred CHHHHHHHHHHhhcCCCeEEEECCCCHhhHHHHhCCC
Q 044635 595 NSKTIDILNSLCRDKNNMVFLVSAKSRKTLAEWFSPC 631 (831)
Q Consensus 595 s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~~ 631 (831)
-+.+.++|+.|.+ .|..++|+||.....+..++..+
T Consensus 86 ~pg~~e~l~~l~~-~g~~~~IvS~~~~~~i~~~l~~~ 121 (224)
T PLN02954 86 SPGIPELVKKLRA-RGTDVYLVSGGFRQMIAPVAAIL 121 (224)
T ss_pred CccHHHHHHHHHH-CCCEEEEECCCcHHHHHHHHHHh
Confidence 3566778888866 58999999999999888877654
No 239
>TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family. which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles.
Probab=91.92 E-value=0.15 Score=54.58 Aligned_cols=58 Identities=28% Similarity=0.363 Sum_probs=42.0
Q ss_pred cCceeEEecCCCccCCCCC-------C----------------CCCCCHHHHHHHHHHhhcCCCeEEEECCCCHhhH---
Q 044635 571 TTTRAILLDYDGTLMPQAS-------I----------------DKSPNSKTIDILNSLCRDKNNMVFLVSAKSRKTL--- 624 (831)
Q Consensus 571 s~~rli~~D~DGTLl~~~~-------~----------------~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l--- 624 (831)
.++..|++|+|+|+++..+ . ...+-+.+.++|+.|.+ .|..++|+|+|+....
T Consensus 73 ~kp~AVV~DIDeTvLdns~y~~~~~~~~~~~~~~~w~~wv~~~~a~~ipGA~e~L~~L~~-~G~~v~iVTnR~~~~~~~T 151 (266)
T TIGR01533 73 DKKYAIVLDLDETVLDNSPYQGYQVLNNKPFDPETWDKWVQAAQAKPVAGALDFLNYANS-KGVKIFYVSNRSEKEKAAT 151 (266)
T ss_pred CCCCEEEEeCccccccChHHHHHHhcCCCcCCHHHHHHHHHcCCCCcCccHHHHHHHHHH-CCCeEEEEeCCCcchHHHH
Confidence 4567999999999997431 0 11234778899999976 5999999999985543
Q ss_pred HHHhC
Q 044635 625 AEWFS 629 (831)
Q Consensus 625 ~~~~~ 629 (831)
..++.
T Consensus 152 ~~~Lk 156 (266)
T TIGR01533 152 LKNLK 156 (266)
T ss_pred HHHHH
Confidence 35554
No 240
>TIGR01685 MDP-1 magnesium-dependent phosphatase-1. This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues.
Probab=91.88 E-value=0.25 Score=49.42 Aligned_cols=57 Identities=23% Similarity=0.242 Sum_probs=43.3
Q ss_pred ceeEEecCCCccCCCCCC-----------------------CCCCCHHHHHHHHHHhhcCCCeEEEECCC-CHhhHHHHh
Q 044635 573 TRAILLDYDGTLMPQASI-----------------------DKSPNSKTIDILNSLCRDKNNMVFLVSAK-SRKTLAEWF 628 (831)
Q Consensus 573 ~rli~~D~DGTLl~~~~~-----------------------~~~~s~~~~~~L~~L~~d~g~~V~I~SGR-~~~~l~~~~ 628 (831)
.||++||+|+||.++.-. ...+-+.+.++|+.|.+ .|..++|+|+. ....+...+
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~pGv~elL~~Lk~-~G~~l~I~Sn~~~~~~~~~~L 80 (174)
T TIGR01685 2 PRVIVFDLDGTLWDHYMISLLGGPFKPVKQNNSIIIDKSGTEVTLIKEVRDVLQTLKD-AGTYLATASWNDVPEWAYEIL 80 (174)
T ss_pred CcEEEEeCCCCCcCcccccccCCCceeccCCCCeEEeCCCCEEEEcccHHHHHHHHHH-CCCEEEEEeCCCChHHHHHHH
Confidence 589999999999974310 01234788999999976 59999999988 777777766
Q ss_pred CC
Q 044635 629 SP 630 (831)
Q Consensus 629 ~~ 630 (831)
..
T Consensus 81 ~~ 82 (174)
T TIGR01685 81 GT 82 (174)
T ss_pred Hh
Confidence 54
No 241
>PF08235 LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 This domain is found in Saccharomyces cerevisiae (Baker's yeast) protein SMP2, proteins with an N-terminal lipin domain (IPR007651 from INTERPRO) and phosphatidylinositol transfer proteins []. SMP2 is involved in plasmid maintenance and respiration []. Lipin proteins are involved in adipose tissue development and insulin resistance [].
Probab=91.60 E-value=0.27 Score=48.01 Aligned_cols=56 Identities=11% Similarity=0.278 Sum_probs=41.5
Q ss_pred eEEecCCCccCCCCC--------CCCCCCHHHHHHHHHHhhcCCCeEEEECCCCHh---hHHHHhCCC
Q 044635 575 AILLDYDGTLMPQAS--------IDKSPNSKTIDILNSLCRDKNNMVFLVSAKSRK---TLAEWFSPC 631 (831)
Q Consensus 575 li~~D~DGTLl~~~~--------~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~---~l~~~~~~~ 631 (831)
++++|+|||++...- ......+.+.++.+++.+ +|..++-+|+|+.. ..+.|+...
T Consensus 1 VVvsDIDGTiT~SD~~G~i~~~~G~d~~h~g~~~l~~~i~~-~GY~ilYlTaRp~~qa~~Tr~~L~~~ 67 (157)
T PF08235_consen 1 VVVSDIDGTITKSDVLGHILPILGKDWTHPGAAELYRKIAD-NGYKILYLTARPIGQANRTRSWLAQH 67 (157)
T ss_pred CEEEeccCCcCccchhhhhhhccCchhhhhcHHHHHHHHHH-CCeEEEEECcCcHHHHHHHHHHHHHH
Confidence 489999999998421 011345788899999976 69999999999965 456677654
No 242
>PF02350 Epimerase_2: UDP-N-acetylglucosamine 2-epimerase; InterPro: IPR003331 UDP-N-acetylglucosamine 2-epimerase 5.1.3.14 from EC catalyses the production of UDP-ManNAc from UDP-GlcNAc. Some of the enzymes is this family are bifunctional. In microorganisms the epimerase is involved in in the synthesis of the capsule precursor UDP-ManNAcA [, ]. The protein from rat liver displays both epimerase and kinase activity [].; GO: 0008761 UDP-N-acetylglucosamine 2-epimerase activity, 0006047 UDP-N-acetylglucosamine metabolic process, 0009103 lipopolysaccharide biosynthetic process; PDB: 1V4V_B 3BEO_B 3DZC_B 3OT5_B 1O6C_B 1VGV_D 1F6D_C.
Probab=91.54 E-value=19 Score=40.14 Aligned_cols=257 Identities=16% Similarity=0.113 Sum_probs=124.6
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCEEEEeCccccchHHHHHhhcCCCeEEEEEeccCCChHHhhcCCChHHHHHHHh--cCC
Q 044635 182 AYVSVNKIFADRIMEVINPEDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYKTLPIREEILRALL--NSD 259 (831)
Q Consensus 182 ~Y~~vN~~fa~~i~~~~~~~~d~vwvhDyhL~llp~~lr~~~~~~~i~~flH~PfP~~e~f~~lp~r~eil~~ll--~~d 259 (831)
..-.+=..|++.+.+ .+| |+|.||.=-.-.+...+-...-++||+.. |-=-=+.|. .-|.-+|+.|-+. -||
T Consensus 51 ~~~~~~~~~~~~~~~-~~P--d~Vlv~GD~~~~la~alaA~~~~ipv~Hi-eaGlRs~d~--~~g~~de~~R~~i~~la~ 124 (346)
T PF02350_consen 51 STGLAIIELADVLER-EKP--DAVLVLGDRNEALAAALAAFYLNIPVAHI-EAGLRSGDR--TEGMPDEINRHAIDKLAH 124 (346)
T ss_dssp HHHHHHHHHHHHHHH-HT---SEEEEETTSHHHHHHHHHHHHTT-EEEEE-S-----S-T--TSSTTHHHHHHHHHHH-S
T ss_pred HHHHHHHHHHHHHHh-cCC--CEEEEEcCCchHHHHHHHHHHhCCCEEEe-cCCCCcccc--CCCCchhhhhhhhhhhhh
Confidence 333344445554444 366 89999988877777766666667775432 110001111 1233444444432 256
Q ss_pred eEeecCHHhHHHHHHHHHHHhCCeecccCceeeEEEcCEEEEEEEeecccChHHHHHhhCCcchHHHHHHHHHHhccCCc
Q 044635 260 LIGFHTFDYARHFLSCCSRMLGLTYESKRGYIGLEYYGRTVSIKILPVGIHMGQLQSVLSLPGTEAKVSELIKQFHDQGK 339 (831)
Q Consensus 260 ligf~t~~~~~~Fl~~~~r~l~~~~~~~~~~~~~~~~gr~~~i~v~P~GId~~~~~~~~~~~~~~~~~~~lr~~~~~~~~ 339 (831)
+----|..+.++.++ +|.. .++ +..-| .+++|.-........+... ...+.... .++
T Consensus 125 lhf~~t~~~~~~L~~-----~G~~--~~r----I~~vG--------~~~~D~l~~~~~~~~~~~~--~~~i~~~~--~~~ 181 (346)
T PF02350_consen 125 LHFAPTEEARERLLQ-----EGEP--PER----IFVVG--------NPGIDALLQNKEEIEEKYK--NSGILQDA--PKP 181 (346)
T ss_dssp EEEESSHHHHHHHHH-----TT----GGG----EEE-----------HHHHHHHHHHHTTCC-HH--HHHHHHCT--TSE
T ss_pred hhccCCHHHHHHHHh-----cCCC--CCe----EEEEC--------hHHHHHHHHhHHHHhhhhh--hHHHHhcc--CCC
Confidence 665667777777664 2332 111 22222 3566654333221111110 11221122 556
Q ss_pred EEEEeccCcccc---cCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhccCCCCCCcc
Q 044635 340 VMLLGVDDMDIF---KGISLKLLAMEQLLIQHPEWQGKVVLVQIANPARGRGKDVKEVQAETYSTVERINQTFGKPGYDP 416 (831)
Q Consensus 340 ~iil~VdRld~~---KGi~~~l~A~~~lL~~~P~~~~~vvLvqig~p~r~~~~~~~~l~~~i~~lv~~IN~~~g~~~~~p 416 (831)
.+++..=|.... ......+.+++.+.+. +++. +|....++ +...+.+.+...+ | ..
T Consensus 182 ~iLvt~H~~t~~~~~~~~~~i~~~l~~L~~~-~~~~----vi~~~hn~-------p~~~~~i~~~l~~----~-----~~ 240 (346)
T PF02350_consen 182 YILVTLHPVTNEDNPERLEQILEALKALAER-QNVP----VIFPLHNN-------PRGSDIIIEKLKK----Y-----DN 240 (346)
T ss_dssp EEEEE-S-CCCCTHH--HHHHHHHHHHHHHH-TTEE----EEEE--S--------HHHHHHHHHHHTT----------TT
T ss_pred EEEEEeCcchhcCChHHHHHHHHHHHHHHhc-CCCc----EEEEecCC-------chHHHHHHHHhcc----c-----CC
Confidence 666666555443 3466777788888776 5443 55544322 1223333222221 1 13
Q ss_pred EEEecCCCCHHHHHHHHHHcCEeEECCC--c-cCCCCCCCCCceEEEeccccccccc---CCCceeCCCCHHHHHHHHHH
Q 044635 417 VVLIDEPLKFYERIAYYVVAECCLVTAV--R-DGSEPSSPKKSMLVVSEFIGCSPSL---SGAIRVNPWNIDAVSDAMDS 490 (831)
Q Consensus 417 v~~~~~~v~~~el~aly~~ADv~vvtS~--~-eGma~~~~~~g~lVlSe~~G~~~~l---~~allVnP~d~~~~A~ai~~ 490 (831)
+.++ .+++..++.++++.|+++|-.|- . |...+ +.|+|.-...|--++. ...++|. .|.+++.++|.+
T Consensus 241 v~~~-~~l~~~~~l~ll~~a~~vvgdSsGI~eEa~~l----g~P~v~iR~~geRqe~r~~~~nvlv~-~~~~~I~~ai~~ 314 (346)
T PF02350_consen 241 VRLI-EPLGYEEYLSLLKNADLVVGDSSGIQEEAPSL----GKPVVNIRDSGERQEGRERGSNVLVG-TDPEAIIQAIEK 314 (346)
T ss_dssp EEEE-----HHHHHHHHHHESEEEESSHHHHHHGGGG----T--EEECSSS-S-HHHHHTTSEEEET-SSHHHHHHHHHH
T ss_pred EEEE-CCCCHHHHHHHHhcceEEEEcCccHHHHHHHh----CCeEEEecCCCCCHHHHhhcceEEeC-CCHHHHHHHHHH
Confidence 5554 47999999999999999988774 2 32222 2344444444544444 3456665 799999999999
Q ss_pred HhcC
Q 044635 491 ALEM 494 (831)
Q Consensus 491 aL~m 494 (831)
++..
T Consensus 315 ~l~~ 318 (346)
T PF02350_consen 315 ALSD 318 (346)
T ss_dssp HHH-
T ss_pred HHhC
Confidence 9974
No 243
>TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522.
Probab=91.37 E-value=0.31 Score=61.56 Aligned_cols=41 Identities=10% Similarity=0.177 Sum_probs=34.6
Q ss_pred CCCCCCHHHHHHHHHHhhcCCCeEEEECCCCHhhHHHHhCCC
Q 044635 590 IDKSPNSKTIDILNSLCRDKNNMVFLVSAKSRKTLAEWFSPC 631 (831)
Q Consensus 590 ~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~~ 631 (831)
....+-+++.+++++|.+ .|..++++||..........+.+
T Consensus 534 ~~Dplr~~v~e~I~~l~~-aGI~v~miTGD~~~tA~~ia~~~ 574 (917)
T TIGR01116 534 MLDPPRPEVADAIEKCRT-AGIRVIMITGDNKETAEAICRRI 574 (917)
T ss_pred eeCCCchhHHHHHHHHHH-CCCEEEEecCCCHHHHHHHHHHc
Confidence 345678999999999976 59999999999999888887654
No 244
>smart00577 CPDc catalytic domain of ctd-like phosphatases.
Probab=91.28 E-value=0.31 Score=47.25 Aligned_cols=58 Identities=14% Similarity=0.159 Sum_probs=43.5
Q ss_pred CceeEEecCCCccCCCCC------CCC-----------------CCCHHHHHHHHHHhhcCCCeEEEECCCCHhhHHHHh
Q 044635 572 TTRAILLDYDGTLMPQAS------IDK-----------------SPNSKTIDILNSLCRDKNNMVFLVSAKSRKTLAEWF 628 (831)
Q Consensus 572 ~~rli~~D~DGTLl~~~~------~~~-----------------~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~ 628 (831)
++.++++|+||||+.... ... .+-|.+.+.|+.|.+ +..++|+|+.+...++..+
T Consensus 1 ~k~~lvldld~tl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~pG~~e~L~~L~~--~~~l~I~Ts~~~~~~~~il 78 (148)
T smart00577 1 KKKTLVLDLDETLVHSTHRSFKEWTNRDFIVPVLIDGHPHGVYVKKRPGVDEFLKRASE--LFELVVFTAGLRMYADPVL 78 (148)
T ss_pred CCcEEEEeCCCCeECCCCCcCCCCCccceEEEEEeCCceEEEEEEECCCHHHHHHHHHh--ccEEEEEeCCcHHHHHHHH
Confidence 367899999999998521 000 124678899999963 7899999999999888877
Q ss_pred CCC
Q 044635 629 SPC 631 (831)
Q Consensus 629 ~~~ 631 (831)
..+
T Consensus 79 ~~l 81 (148)
T smart00577 79 DLL 81 (148)
T ss_pred HHh
Confidence 644
No 245
>PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase). This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J ....
Probab=90.86 E-value=0.28 Score=49.98 Aligned_cols=33 Identities=21% Similarity=0.336 Sum_probs=28.4
Q ss_pred HHHHHHHHhhhcCCCcccEEEEcCCchhHHHHHHcc
Q 044635 743 VAKRLLSTMQEREMLPDFVLCVGDDRSDEDMFEVII 778 (831)
Q Consensus 743 al~~Ll~~l~~~g~~~d~vla~GD~~NDe~Mf~~a~ 778 (831)
.+..+++.+ +.++..|+++||+.||..|++.|+
T Consensus 183 ~~~~~i~~l---~~~~~~v~~vGDg~nD~~al~~Ag 215 (215)
T PF00702_consen 183 IFLRIIKEL---QVKPGEVAMVGDGVNDAPALKAAG 215 (215)
T ss_dssp HHHHHHHHH---TCTGGGEEEEESSGGHHHHHHHSS
T ss_pred hHHHHHHHH---hcCCCEEEEEccCHHHHHHHHhCc
Confidence 557777777 778889999999999999999875
No 246
>TIGR01680 Veg_Stor_Prot vegetative storage protein. The proteins represented by this model are close relatives of the plant acid phosphatases (TIGR01675), are limited to members of the Phaseoleae including Glycine max (soybean) and Phaseolus vulgaris (kidney bean). These proteins are highly expressed in the leaves of repeatedly depodded plants. VSP differs most strinkingly from the acid phosphatases in the lack of the conserved nucleophilic aspartate residue in the N-terminus, thus, they should be inactive as phosphatases. This issue was confused by the publication in 1992 of an article claiming activity for the Glycine max VSP. In 1994 this assertion was refuted by the separation of the activity from the VSP.
Probab=90.75 E-value=0.25 Score=52.44 Aligned_cols=51 Identities=16% Similarity=0.274 Sum_probs=38.7
Q ss_pred CceeEEecCCCccCCCCC-----------------C-------CCCCCHHHHHHHHHHhhcCCCeEEEECCCCHhh
Q 044635 572 TTRAILLDYDGTLMPQAS-----------------I-------DKSPNSKTIDILNSLCRDKNNMVFLVSAKSRKT 623 (831)
Q Consensus 572 ~~rli~~D~DGTLl~~~~-----------------~-------~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~ 623 (831)
.+-++++|+|+|+++..+ . ...+-+.+++.++.+.+ .|..|+++|||+...
T Consensus 100 ~~dA~V~DIDET~LsN~pY~~~~~~g~e~~~~~~w~~~Wv~~~~ApAlp~al~ly~~l~~-~G~kIf~VSgR~e~~ 174 (275)
T TIGR01680 100 EKDTFLFNIDGTALSNIPYYKKHGYGSEKFDSELYDEEFVNKGEAPALPETLKNYNKLVS-LGFKIIFLSGRLKDK 174 (275)
T ss_pred CCCEEEEECccccccCHHHHHHhcCCCCcCChhhhhHHHHhcccCCCChHHHHHHHHHHH-CCCEEEEEeCCchhH
Confidence 356999999999995211 0 22345788999999976 699999999998643
No 247
>COG0763 LpxB Lipid A disaccharide synthetase [Cell envelope biogenesis, outer membrane]
Probab=89.60 E-value=38 Score=37.92 Aligned_cols=259 Identities=15% Similarity=0.132 Sum_probs=129.3
Q ss_pred CEEEEeCccc--cchHHHHHhhcCCCeEEEEEeccCCChHHhhcCCChHHHHHHHhcCCeEeecCHHhHHHHHHHHHHHh
Q 044635 203 DFVWVHDYHL--MVLPTFLRKRFNRVKLGFFLHSPFPSSEIYKTLPIREEILRALLNSDLIGFHTFDYARHFLSCCSRML 280 (831)
Q Consensus 203 d~vwvhDyhL--~llp~~lr~~~~~~~i~~flH~PfP~~e~f~~lp~r~eil~~ll~~dligf~t~~~~~~Fl~~~~r~l 280 (831)
|++..=|+-= ..|...+|+.+|++||.++.- |.++.==|.|...+.. .+|++.--.+.-..-|-. .
T Consensus 87 D~~i~IDsPdFnl~vak~lrk~~p~i~iihYV~-----PsVWAWr~~Ra~~i~~--~~D~lLailPFE~~~y~k-----~ 154 (381)
T COG0763 87 DVLILIDSPDFNLRVAKKLRKAGPKIKIIHYVS-----PSVWAWRPKRAVKIAK--YVDHLLAILPFEPAFYDK-----F 154 (381)
T ss_pred CEEEEeCCCCCchHHHHHHHHhCCCCCeEEEEC-----cceeeechhhHHHHHH--HhhHeeeecCCCHHHHHh-----c
Confidence 6666656542 345678999999999987654 3344322445333333 256654322211111111 1
Q ss_pred CCeecccCceeeEEEcCEEEEEEEeecccChHHHHHhhCCcchHHHHHHHHHHhc-c-CCcEEEEecc--CcccccCHHH
Q 044635 281 GLTYESKRGYIGLEYYGRTVSIKILPVGIHMGQLQSVLSLPGTEAKVSELIKQFH-D-QGKVMLLGVD--DMDIFKGISL 356 (831)
Q Consensus 281 ~~~~~~~~~~~~~~~~gr~~~i~v~P~GId~~~~~~~~~~~~~~~~~~~lr~~~~-~-~~~~iil~Vd--Rld~~KGi~~ 356 (831)
|. -..|-|++. .|.-.+ ....+..|++++ + ..+.+.+-.| |=+-..-.+-
T Consensus 155 g~---------~~~yVGHpl--------~d~i~~---------~~~r~~ar~~l~~~~~~~~lalLPGSR~sEI~rl~~~ 208 (381)
T COG0763 155 GL---------PCTYVGHPL--------ADEIPL---------LPDREAAREKLGIDADEKTLALLPGSRRSEIRRLLPP 208 (381)
T ss_pred CC---------CeEEeCChh--------hhhccc---------cccHHHHHHHhCCCCCCCeEEEecCCcHHHHHHHHHH
Confidence 11 123445422 111111 112234677776 3 3444544444 3445566778
Q ss_pred HHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhccCCCCCCccEEEecCCCCHHHHHHHHHHc
Q 044635 357 KLLAMEQLLIQHPEWQGKVVLVQIANPARGRGKDVKEVQAETYSTVERINQTFGKPGYDPVVLIDEPLKFYERIAYYVVA 436 (831)
Q Consensus 357 ~l~A~~~lL~~~P~~~~~vvLvqig~p~r~~~~~~~~l~~~i~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~A 436 (831)
.++|++++.+++|+++ ++.-..+ ..++.++.+ ....-. ..+..+ +...+....+.+|
T Consensus 209 f~~a~~~l~~~~~~~~----~vlp~~~-----~~~~~~~~~---~~~~~~-------~~~~~~----~~~~~~~~a~~~a 265 (381)
T COG0763 209 FVQAAQELKARYPDLK----FVLPLVN-----AKYRRIIEE---ALKWEV-------AGLSLI----LIDGEKRKAFAAA 265 (381)
T ss_pred HHHHHHHHHhhCCCce----EEEecCc-----HHHHHHHHH---Hhhccc-------cCceEE----ecCchHHHHHHHh
Confidence 8899999999999987 5543322 223333322 211110 001222 2244788889999
Q ss_pred CEeEECCCccCCCCCCCCCceEEEe-----------------cccccccccCCCceeC-----CCCHHHHHHHHHHHhcC
Q 044635 437 ECCLVTAVRDGSEPSSPKKSMLVVS-----------------EFIGCSPSLSGAIRVN-----PWNIDAVSDAMDSALEM 494 (831)
Q Consensus 437 Dv~vvtS~~eGma~~~~~~g~lVlS-----------------e~~G~~~~l~~allVn-----P~d~~~~A~ai~~aL~m 494 (831)
|+.+..|=.=.+-+ +-.+.|.|++ .+++....+-+-.+|+ --.++.+|+++...+..
T Consensus 266 D~al~aSGT~tLE~-aL~g~P~Vv~Yk~~~it~~iak~lvk~~yisLpNIi~~~~ivPEliq~~~~pe~la~~l~~ll~~ 344 (381)
T COG0763 266 DAALAASGTATLEA-ALAGTPMVVAYKVKPITYFIAKRLVKLPYVSLPNILAGREIVPELIQEDCTPENLARALEELLLN 344 (381)
T ss_pred hHHHHhccHHHHHH-HHhCCCEEEEEeccHHHHHHHHHhccCCcccchHHhcCCccchHHHhhhcCHHHHHHHHHHHhcC
Confidence 99998884322200 0113455554 2333222222222221 12378999999999876
Q ss_pred CHH--HHHHHHHHHhhhhccCCHHHHHHHHH
Q 044635 495 ADQ--EKQLRHEKHYRYVSTHDVGYWARSFL 523 (831)
Q Consensus 495 ~~~--er~~r~~~~~~~v~~~~~~~W~~~~l 523 (831)
+.. +..+....+++++.+..+..-+.+.+
T Consensus 345 ~~~~~~~~~~~~~l~~~l~~~~~~e~aA~~v 375 (381)
T COG0763 345 GDRREALKEKFRELHQYLREDPASEIAAQAV 375 (381)
T ss_pred hHhHHHHHHHHHHHHHHHcCCcHHHHHHHHH
Confidence 622 22334445666666653444444443
No 248
>TIGR03492 conserved hypothetical protein. This protein family is restricted to the Cyanobacteria, in one or two copies, save for instances in the genus Deinococcus. This protein shows some sequence similarity, especially toward the C-terminus, to lipid-A-disaccharide synthase (TIGR00215 or pfam02684). The function is unknown.
Probab=89.47 E-value=5.2 Score=45.53 Aligned_cols=135 Identities=15% Similarity=0.118 Sum_probs=74.2
Q ss_pred cEEEEeccC-cccccCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhc---------c
Q 044635 339 KVMLLGVDD-MDIFKGISLKLLAMEQLLIQHPEWQGKVVLVQIANPARGRGKDVKEVQAETYSTVERINQ---------T 408 (831)
Q Consensus 339 ~~iil~VdR-ld~~KGi~~~l~A~~~lL~~~P~~~~~vvLvqig~p~r~~~~~~~~l~~~i~~lv~~IN~---------~ 408 (831)
..+++.-.| -+..++++..++|++++.++ |++ .++....+. .+++.+++.+.+. .++. .
T Consensus 207 ~lllLpGSR~ae~~~~lp~~l~al~~L~~~-~~~----~~v~~~~~~----~~~~~~~~~l~~~--g~~~~~~~~~~~~~ 275 (396)
T TIGR03492 207 RIALLPGSRPPEAYRNLKLLLRALEALPDS-QPF----VFLAAIVPS----LSLEKLQAILEDL--GWQLEGSSEDQTSL 275 (396)
T ss_pred EEEEECCCCHHHHHccHHHHHHHHHHHhhC-CCe----EEEEEeCCC----CCHHHHHHHHHhc--CceecCCccccchh
Confidence 345667777 45667888999999998655 543 355544332 2333444333221 0000 0
Q ss_pred CCCCCCccEEEecCCCCHHHHHHHHHHcCEeEECCC---ccCCCCCCCCCceEEEeccccc------ccc---c-CCCce
Q 044635 409 FGKPGYDPVVLIDEPLKFYERIAYYVVAECCLVTAV---RDGSEPSSPKKSMLVVSEFIGC------SPS---L-SGAIR 475 (831)
Q Consensus 409 ~g~~~~~pv~~~~~~v~~~el~aly~~ADv~vvtS~---~eGma~~~~~~g~lVlSe~~G~------~~~---l-~~all 475 (831)
|.. .++.++. ...+..++|+.||++|..|= -|-+++ +.|.|+.-+-+. .+. + .+++.
T Consensus 276 ~~~---~~~~v~~---~~~~~~~~l~~ADlvI~rSGt~T~E~a~l----g~P~Ilip~~~~q~na~~~~~~~~l~g~~~~ 345 (396)
T TIGR03492 276 FQK---GTLEVLL---GRGAFAEILHWADLGIAMAGTATEQAVGL----GKPVIQLPGKGPQFTYGFAEAQSRLLGGSVF 345 (396)
T ss_pred hcc---CceEEEe---chHhHHHHHHhCCEEEECcCHHHHHHHHh----CCCEEEEeCCCCHHHHHHHHhhHhhcCCEEe
Confidence 000 0122221 24578999999999999773 122222 334555432111 011 1 34555
Q ss_pred eCCCCHHHHHHHHHHHhcC
Q 044635 476 VNPWNIDAVSDAMDSALEM 494 (831)
Q Consensus 476 VnP~d~~~~A~ai~~aL~m 494 (831)
+...+++.++++|.++|+.
T Consensus 346 l~~~~~~~l~~~l~~ll~d 364 (396)
T TIGR03492 346 LASKNPEQAAQVVRQLLAD 364 (396)
T ss_pred cCCCCHHHHHHHHHHHHcC
Confidence 5567789999999999874
No 249
>PF12689 Acid_PPase: Acid Phosphatase; InterPro: IPR010036 This entry represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterised as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues [, ].; GO: 0016791 phosphatase activity; PDB: 1U7P_A 1U7O_A 2WM8_A.
Probab=89.24 E-value=8.9 Score=38.13 Aligned_cols=93 Identities=18% Similarity=0.251 Sum_probs=46.6
Q ss_pred HHHHHHHHhccCCCeeEeeccceEEEeeccCCCccchHHHHHHHHHHHhH-hcCCCeEEEEcCeEEEEEeCCCCHHHHHH
Q 044635 667 AEPVMKLYTETTDGSTIEDKETALVWSYEDADPDFGSCQAKELLDHLESV-LANEPVTVKSGQNLVEVKPQGVNKGLVAK 745 (831)
Q Consensus 667 v~~il~~~~e~~~gs~ie~k~~~l~~~~~~~d~~~~~~~a~el~~~L~~~-l~~~~v~v~~g~~~vEV~p~gvnKG~al~ 745 (831)
+..+++...+ ++..+..--+...|+ .|+++++.++=. .....+.....-.++||-|. +|-.=.+
T Consensus 50 v~~iL~~L~~---------~gv~lavASRt~~P~----~A~~~L~~l~i~~~~~~~~~~~~~F~~~eI~~g--sK~~Hf~ 114 (169)
T PF12689_consen 50 VPEILQELKE---------RGVKLAVASRTDEPD----WARELLKLLEIDDADGDGVPLIEYFDYLEIYPG--SKTTHFR 114 (169)
T ss_dssp HHHHHHHHHH---------CT--EEEEE--S-HH----HHHHHHHHTT-C----------CCECEEEESSS---HHHHHH
T ss_pred HHHHHHHHHH---------CCCEEEEEECCCChH----HHHHHHHhcCCCccccccccchhhcchhheecC--chHHHHH
Confidence 5556665543 334444444443343 356666655322 01112223333456899886 9999999
Q ss_pred HHHHHhhhcCCCcccEEEEcCCchhHHHHHHc
Q 044635 746 RLLSTMQEREMLPDFVLCVGDDRSDEDMFEVI 777 (831)
Q Consensus 746 ~Ll~~l~~~g~~~d~vla~GD~~NDe~Mf~~a 777 (831)
.|.+.. |++++.++.|=|.....+--+.+
T Consensus 115 ~i~~~t---gI~y~eMlFFDDe~~N~~~v~~l 143 (169)
T PF12689_consen 115 RIHRKT---GIPYEEMLFFDDESRNIEVVSKL 143 (169)
T ss_dssp HHHHHH------GGGEEEEES-HHHHHHHHTT
T ss_pred HHHHhc---CCChhHEEEecCchhcceeeEec
Confidence 999987 99999999998865443433334
No 250
>PRK13478 phosphonoacetaldehyde hydrolase; Provisional
Probab=89.11 E-value=0.9 Score=48.62 Aligned_cols=69 Identities=9% Similarity=0.043 Sum_probs=52.7
Q ss_pred HHHHHHHHHHhhhcCCC-cccEEEEcCCchhHHHHHHcchhcCCCCCCCCCceEEEEeCCC-------------------
Q 044635 741 GLVAKRLLSTMQEREML-PDFVLCVGDDRSDEDMFEVIISSMAGPSIAPRAEVFACTVGRK------------------- 800 (831)
Q Consensus 741 G~al~~Ll~~l~~~g~~-~d~vla~GD~~NDe~Mf~~a~~~~~~~~~~~~~~~~~v~vG~~------------------- 800 (831)
-..+...++.+ |+. ++++++|||+.+|+.+-+.+|.. .++|+.|..
T Consensus 161 p~~~~~a~~~l---~~~~~~e~l~IGDs~~Di~aA~~aG~~-----------~i~v~~g~~~~~~~~~~~~~~~~~~~~~ 226 (267)
T PRK13478 161 PWMALKNAIEL---GVYDVAACVKVDDTVPGIEEGLNAGMW-----------TVGVILSGNELGLSEEEYQALSAAELAA 226 (267)
T ss_pred hHHHHHHHHHc---CCCCCcceEEEcCcHHHHHHHHHCCCE-----------EEEEccCcccccCCHHHHHhcCHHHHHH
Confidence 45677777777 875 69999999999999999998742 356666632
Q ss_pred ----------CcccceEeCChhHHHHHHHHHHh
Q 044635 801 ----------PSKAKYYLDDTVEIVRLMQGLAC 823 (831)
Q Consensus 801 ----------~s~A~y~l~d~~eV~~~L~~L~~ 823 (831)
...|.+++++..++..+|+.+..
T Consensus 227 ~~~~~~~~l~~~~a~~vi~~~~~l~~~l~~~~~ 259 (267)
T PRK13478 227 RRERARARLRAAGAHYVIDTIADLPAVIADIEA 259 (267)
T ss_pred HHHHHHHHHHHcCCCeehhhHHHHHHHHHHHHH
Confidence 24588999999999988876543
No 251
>COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=89.10 E-value=0.48 Score=49.04 Aligned_cols=38 Identities=8% Similarity=0.008 Sum_probs=30.6
Q ss_pred CCCHHHHHHHHHHhhcCCCeEEEECCCCHhhHHHHhCCC
Q 044635 593 SPNSKTIDILNSLCRDKNNMVFLVSAKSRKTLAEWFSPC 631 (831)
Q Consensus 593 ~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~~ 631 (831)
.+.+.+.+.++.+.+ .|.+++|+||-....++++...+
T Consensus 77 ~l~~ga~elv~~lk~-~G~~v~iiSgg~~~lv~~ia~~l 114 (212)
T COG0560 77 RLTPGAEELVAALKA-AGAKVVIISGGFTFLVEPIAERL 114 (212)
T ss_pred cCCccHHHHHHHHHH-CCCEEEEEcCChHHHHHHHHHHh
Confidence 346778888888876 69999999999988777777654
No 252
>PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional
Probab=88.76 E-value=0.45 Score=52.98 Aligned_cols=47 Identities=19% Similarity=0.299 Sum_probs=37.5
Q ss_pred CceeEEecCCCccCCCCC--------CCCCCCHHHHHHHHHHhhcCCCeEEEECCC
Q 044635 572 TTRAILLDYDGTLMPQAS--------IDKSPNSKTIDILNSLCRDKNNMVFLVSAK 619 (831)
Q Consensus 572 ~~rli~~D~DGTLl~~~~--------~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR 619 (831)
+++++|+|.||||....+ ....+-|.+.++|..|.+ .|..++|+|+.
T Consensus 1 ~~k~l~lDrDgtl~~~~~~~y~~~~~~~~~l~pGV~e~L~~Lk~-~G~kL~IvTNq 55 (354)
T PRK05446 1 MQKILFIDRDGTLIEEPPTDFQVDSLDKLAFEPGVIPALLKLQK-AGYKLVMVTNQ 55 (354)
T ss_pred CCcEEEEeCCCCccCCCCccccccCcccceECcCHHHHHHHHHh-CCCeEEEEECC
Confidence 468999999999998432 123456889999999965 68999999984
No 253
>PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25). The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A ....
Probab=88.12 E-value=0.057 Score=56.56 Aligned_cols=53 Identities=13% Similarity=0.282 Sum_probs=39.6
Q ss_pred cCceeEEecCCCccCCCCC-----------------------CCCCCCHHHHHHHHHHhhcCCCeEEEECCCCHhhH
Q 044635 571 TTTRAILLDYDGTLMPQAS-----------------------IDKSPNSKTIDILNSLCRDKNNMVFLVSAKSRKTL 624 (831)
Q Consensus 571 s~~rli~~D~DGTLl~~~~-----------------------~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l 624 (831)
-++..+++|+|+|+++... ....+-|.+++.++.+.+ .|..|+++|||+...-
T Consensus 70 ~~~~avv~DIDeTvLsn~~y~~~~~~~~~~~~~~~w~~wv~~~~~~aip~a~~l~~~~~~-~G~~V~~iT~R~~~~r 145 (229)
T PF03767_consen 70 DKPPAVVFDIDETVLSNSPYYAYLIFGGESFSPEDWDEWVASGKAPAIPGALELYNYARS-RGVKVFFITGRPESQR 145 (229)
T ss_dssp TSEEEEEEESBTTTEEHHHHHHHHHHHTHHH-CCHHHHHHHCTGGEEETTHHHHHHHHHH-TTEEEEEEEEEETTCH
T ss_pred CCCcEEEEECCcccccCHHHHHHHhhccCCCChHHHHHHHhcccCcccHHHHHHHHHHHH-CCCeEEEEecCCchhH
Confidence 4678999999999986210 011234668899999877 6999999999997743
No 254
>PRK13582 thrH phosphoserine phosphatase; Provisional
Probab=87.75 E-value=0.5 Score=48.12 Aligned_cols=34 Identities=12% Similarity=0.127 Sum_probs=26.9
Q ss_pred HHHHHHHHHHhhcCCCeEEEECCCCHhhHHHHhCCC
Q 044635 596 SKTIDILNSLCRDKNNMVFLVSAKSRKTLAEWFSPC 631 (831)
Q Consensus 596 ~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~~ 631 (831)
+.+.++|+.|.+ . ..++|+|+.....++.++..+
T Consensus 71 pg~~e~L~~L~~-~-~~~~IvS~~~~~~~~~~l~~~ 104 (205)
T PRK13582 71 PGAVEFLDWLRE-R-FQVVILSDTFYEFAGPLMRQL 104 (205)
T ss_pred CCHHHHHHHHHh-c-CCEEEEeCCcHHHHHHHHHHc
Confidence 446678888866 4 789999999999888887654
No 255
>TIGR02245 HAD_IIID1 HAD-superfamily subfamily IIID hydrolase, TIGR02245. This family of sequences appears to belong to the Haloacid Dehalogenase (HAD) superfamily of enzymes by virtue of the presence of three catalytic domains, in this case: LLVLD(ILV)D(YH)T, I(VMG)IWS, and (DN)(VC)K(PA)Lx{15-17}T(IL)(MH)(FV)DD(IL)(GRS)(RK)N. Since this family has no large "cap" domain between motifs 1 and 2 or between 2 and 3, it is formally a "class III" HAD.
Probab=86.82 E-value=0.97 Score=46.01 Aligned_cols=59 Identities=22% Similarity=0.182 Sum_probs=43.5
Q ss_pred hcCceeEEecCCCccCCCCCCCC----CCCHHHHHHHHHHhhcCCCeEEEECCCCHhhHHHHhCC
Q 044635 570 RTTTRAILLDYDGTLMPQASIDK----SPNSKTIDILNSLCRDKNNMVFLVSAKSRKTLAEWFSP 630 (831)
Q Consensus 570 ~s~~rli~~D~DGTLl~~~~~~~----~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~ 630 (831)
+..++++++|+|+||++..+... ..-|.+.+.|+.+.+ .-.|+|-|..+...+...+..
T Consensus 18 ~~~kklLVLDLDeTLvh~~~~~~~~~~~kRP~l~eFL~~~~~--~feIvVwTAa~~~ya~~~l~~ 80 (195)
T TIGR02245 18 REGKKLLVLDIDYTLFDHRSPAETGEELMRPYLHEFLTSAYE--DYDIVIWSATSMKWIEIKMTE 80 (195)
T ss_pred CCCCcEEEEeCCCceEcccccCCCceEEeCCCHHHHHHHHHh--CCEEEEEecCCHHHHHHHHHH
Confidence 35679999999999998432121 124678889998876 788999888888777776654
No 256
>PF03031 NIF: NLI interacting factor-like phosphatase; InterPro: IPR004274 The function of this domain is unclear. It is found in proteins of diverse function including phosphatases some of which may be active in active in ternary elongation complexes and a number of NLI interacting factors. In the phospatases this domain is often present N-terminal to the BRCT domain (IPR001357 from INTERPRO).; GO: 0005515 protein binding; PDB: 3L0Y_A 2GHQ_A 3PGL_A 3L0C_B 1TA0_A 2GHT_A 3L0B_B 1T9Z_A 3QLE_A 2Q5E_E ....
Probab=86.78 E-value=0.56 Score=45.85 Aligned_cols=56 Identities=20% Similarity=0.280 Sum_probs=38.8
Q ss_pred eeEEecCCCccCCCCCCCC----------------CCCHHHHHHHHHHhhcCCCeEEEECCCCHhhHHHHhCCC
Q 044635 574 RAILLDYDGTLMPQASIDK----------------SPNSKTIDILNSLCRDKNNMVFLVSAKSRKTLAEWFSPC 631 (831)
Q Consensus 574 rli~~D~DGTLl~~~~~~~----------------~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~~ 631 (831)
|++++|+||||+....... ..-|.+.+.|+.+.+ ...++|.|..+...+...+..+
T Consensus 1 k~LVlDLD~TLv~~~~~~~~~~~~~~~~~~~~~~v~~RP~l~~FL~~l~~--~~ev~i~T~~~~~ya~~v~~~l 72 (159)
T PF03031_consen 1 KTLVLDLDGTLVHSSSKSPLPYDFKIIDQRGGYYVKLRPGLDEFLEELSK--HYEVVIWTSASEEYAEPVLDAL 72 (159)
T ss_dssp EEEEEE-CTTTEEEESSTCTT-SEEEETEEEEEEEEE-TTHHHHHHHHHH--HCEEEEE-SS-HHHHHHHHHHH
T ss_pred CEEEEeCCCcEEEEeecCCCCcccceeccccceeEeeCchHHHHHHHHHH--hceEEEEEeehhhhhhHHHHhh
Confidence 6899999999997432211 124678888998855 6899999999988877777655
No 257
>TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5. The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog.
Probab=86.76 E-value=1.2 Score=49.32 Aligned_cols=48 Identities=27% Similarity=0.330 Sum_probs=35.5
Q ss_pred eEEecCCCccCCCCCCCCCCCHHHHHHHHHHhhcC----CCeEEEE---CCCCHhhHHHH
Q 044635 575 AILLDYDGTLMPQASIDKSPNSKTIDILNSLCRDK----NNMVFLV---SAKSRKTLAEW 627 (831)
Q Consensus 575 li~~D~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~----g~~V~I~---SGR~~~~l~~~ 627 (831)
.++||+||||.. ...+-+...++|+.|.. . +..++++ +|++.....+.
T Consensus 2 ~~ifD~DGvL~~----g~~~i~ga~eal~~L~~-~~~~~g~~~~flTNn~g~s~~~~~~~ 56 (321)
T TIGR01456 2 GFAFDIDGVLFR----GKKPIAGASDALRRLNR-NQGQLKIPYIFLTNGGGFSERARAEE 56 (321)
T ss_pred EEEEeCcCceEC----CccccHHHHHHHHHHhc-cccccCCCEEEEecCCCCCHHHHHHH
Confidence 589999999997 34457999999999976 4 5666655 57776664443
No 258
>TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB. The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene.
Probab=86.72 E-value=1.5 Score=45.28 Aligned_cols=21 Identities=10% Similarity=0.158 Sum_probs=18.4
Q ss_pred cEEEEcCCchhHHHHHHcchh
Q 044635 760 FVLCVGDDRSDEDMFEVIISS 780 (831)
Q Consensus 760 ~vla~GD~~NDe~Mf~~a~~~ 780 (831)
...+.|||.||.+||+.+++.
T Consensus 177 ~~~aYsDS~~D~pmL~~a~~~ 197 (210)
T TIGR01545 177 LYSGYSDSKQDNPLLAFCEHR 197 (210)
T ss_pred heEEecCCcccHHHHHhCCCc
Confidence 457999999999999999863
No 259
>TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent.
Probab=86.64 E-value=1.5 Score=46.30 Aligned_cols=64 Identities=14% Similarity=0.102 Sum_probs=47.8
Q ss_pred HHHHHHHHHHhhhcCCC-cccEEEEcCCchhHHHHHHcchhcCCCCCCCCCceEEEEeCCC-------------------
Q 044635 741 GLVAKRLLSTMQEREML-PDFVLCVGDDRSDEDMFEVIISSMAGPSIAPRAEVFACTVGRK------------------- 800 (831)
Q Consensus 741 G~al~~Ll~~l~~~g~~-~d~vla~GD~~NDe~Mf~~a~~~~~~~~~~~~~~~~~v~vG~~------------------- 800 (831)
-......++.+ |+. ++++++|||+.+|+.+=+.+|.. .++|+-|..
T Consensus 159 p~~~~~a~~~l---~~~~~~~~l~IGDs~~Di~aA~~aGi~-----------~i~v~~g~~~~~~~~~~~~~~~~~~~~~ 224 (253)
T TIGR01422 159 PWMALKNAIEL---GVYDVAACVKVGDTVPDIEEGRNAGMW-----------TVGLILSSNELGLSEEEYRALDPAELEA 224 (253)
T ss_pred HHHHHHHHHHc---CCCCchheEEECCcHHHHHHHHHCCCe-----------EEEEecCCcccCCCHHHHHhCCHHHHHH
Confidence 45667777777 874 89999999999999999998852 356666642
Q ss_pred ----------CcccceEeCChhHHHHHH
Q 044635 801 ----------PSKAKYYLDDTVEIVRLM 818 (831)
Q Consensus 801 ----------~s~A~y~l~d~~eV~~~L 818 (831)
...|++++++..++..+|
T Consensus 225 ~~~~~~~~l~~~~~~~v~~~~~el~~~~ 252 (253)
T TIGR01422 225 RRAEATARLKAAGAHYVIDTLAELPAVI 252 (253)
T ss_pred HHHHHHHHHHhcCCCEehhcHHHHHHhh
Confidence 235788888888876654
No 260
>PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 []. It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity
Probab=86.51 E-value=0.69 Score=48.47 Aligned_cols=81 Identities=22% Similarity=0.284 Sum_probs=51.9
Q ss_pred EeCCCCHHHHHHHHHHHhhhcCCCcccEEEEcCCchhHHHHHHcchh---cCCCCCCCCCceEEEE--eCC--CCcccce
Q 044635 734 KPQGVNKGLVAKRLLSTMQEREMLPDFVLCVGDDRSDEDMFEVIISS---MAGPSIAPRAEVFACT--VGR--KPSKAKY 806 (831)
Q Consensus 734 ~p~gvnKG~al~~Ll~~l~~~g~~~d~vla~GD~~NDe~Mf~~a~~~---~~~~~~~~~~~~~~v~--vG~--~~s~A~y 806 (831)
-|.+.-||..++.+++.....|.+.+.|+++||+.||.-....++.. ++... |+.. +.+ ..-+|+-
T Consensus 145 C~~NmCK~~il~~~~~~~~~~g~~~~rviYiGDG~nD~Cp~~~L~~~D~v~~R~~-------~~l~~~i~~~~~~~~a~v 217 (234)
T PF06888_consen 145 CPPNMCKGKILERLLQEQAQRGVPYDRVIYIGDGRNDFCPALRLRPRDVVFPRKG-------YPLHKLIQKNPGEVKAEV 217 (234)
T ss_pred CCCccchHHHHHHHHHHHhhcCCCcceEEEECCCCCCcCcccccCCCCEEecCCC-------ChHHHHHhcCCCcceeEE
Confidence 36678999999999987545578889999999999998766554321 11110 0000 001 1234444
Q ss_pred Ee-CChhHHHHHHHHH
Q 044635 807 YL-DDTVEIVRLMQGL 821 (831)
Q Consensus 807 ~l-~d~~eV~~~L~~L 821 (831)
.. .+-.|+.+.|+.|
T Consensus 218 ~~W~~g~~i~~~l~~~ 233 (234)
T PF06888_consen 218 VPWSSGEEILEILLQL 233 (234)
T ss_pred EecCCHHHHHHHHHhh
Confidence 33 6788888888876
No 261
>PF05152 DUF705: Protein of unknown function (DUF705); InterPro: IPR007827 This family contains uncharacterised baculoviral proteins.
Probab=86.38 E-value=2.2 Score=45.38 Aligned_cols=59 Identities=19% Similarity=0.236 Sum_probs=44.7
Q ss_pred CceeEEecCCCccCCCCCCCCCCCHHHHHHHHHHhhcCCCeEEEECCCCHhhHHHHhCCC
Q 044635 572 TTRAILLDYDGTLMPQASIDKSPNSKTIDILNSLCRDKNNMVFLVSAKSRKTLAEWFSPC 631 (831)
Q Consensus 572 ~~rli~~D~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~~ 631 (831)
...+|++|+|.||+.......-+.+.+.+.|.+|.+ .|..+++=|--+.+-+..-+..+
T Consensus 121 ~phVIVfDlD~TLItd~~~v~Ir~~~v~~sL~~Lk~-~g~vLvLWSyG~~eHV~~sl~~~ 179 (297)
T PF05152_consen 121 PPHVIVFDLDSTLITDEGDVRIRDPAVYDSLRELKE-QGCVLVLWSYGNREHVRHSLKEL 179 (297)
T ss_pred CCcEEEEECCCcccccCCccccCChHHHHHHHHHHH-cCCEEEEecCCCHHHHHHHHHHh
Confidence 456999999999998543344578999999999987 47777777777776666655543
No 262
>TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact.
Probab=86.29 E-value=1.3 Score=44.17 Aligned_cols=40 Identities=23% Similarity=0.267 Sum_probs=32.7
Q ss_pred eCCCCHHHHHHHHHHHhhhcCCCcccEEEEcCCchhHHHHHHcchh
Q 044635 735 PQGVNKGLVAKRLLSTMQEREMLPDFVLCVGDDRSDEDMFEVIISS 780 (831)
Q Consensus 735 p~gvnKG~al~~Ll~~l~~~g~~~d~vla~GD~~NDe~Mf~~a~~~ 780 (831)
+.|..|+..++.+.+.. ++.++++||+.||+.|.+.++..
T Consensus 145 ~~g~~K~~~~~~~~~~~------~~~~i~iGD~~~D~~aa~~~d~~ 184 (188)
T TIGR01489 145 PCGCCKGKVIHKLSEPK------YQHIIYIGDGVTDVCPAKLSDVV 184 (188)
T ss_pred CCCCCHHHHHHHHHhhc------CceEEEECCCcchhchHhcCCcc
Confidence 55678988888887641 68899999999999999888654
No 263
>PRK13222 phosphoglycolate phosphatase; Provisional
Probab=86.17 E-value=1.1 Score=46.13 Aligned_cols=35 Identities=14% Similarity=0.111 Sum_probs=25.3
Q ss_pred HHHHHHHHHHhhcCCCeEEEECCCCHhhHHHHhCCC
Q 044635 596 SKTIDILNSLCRDKNNMVFLVSAKSRKTLAEWFSPC 631 (831)
Q Consensus 596 ~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~~ 631 (831)
+.+.++|+.|.+ .|..++|+||.....+..++..+
T Consensus 96 ~g~~~~l~~l~~-~g~~~~i~S~~~~~~~~~~l~~~ 130 (226)
T PRK13222 96 PGVKETLAALKA-AGYPLAVVTNKPTPFVAPLLEAL 130 (226)
T ss_pred CCHHHHHHHHHH-CCCeEEEEeCCCHHHHHHHHHHc
Confidence 345566666755 48889999999888887777643
No 264
>COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=86.07 E-value=1 Score=54.61 Aligned_cols=67 Identities=21% Similarity=0.261 Sum_probs=53.0
Q ss_pred EEEEEeCCCCHHHHHHHHHHHhhhcCCCcccEEEEcCCchhHHHHHHcchhcCCCCCCCCCceEEEEeCCC----Ccccc
Q 044635 730 LVEVKPQGVNKGLVAKRLLSTMQEREMLPDFVLCVGDDRSDEDMFEVIISSMAGPSIAPRAEVFACTVGRK----PSKAK 805 (831)
Q Consensus 730 ~vEV~p~gvnKG~al~~Ll~~l~~~g~~~d~vla~GD~~NDe~Mf~~a~~~~~~~~~~~~~~~~~v~vG~~----~s~A~ 805 (831)
+=|+.|.+ |...++++.+. | ..|+.+||+.||-+.+..+. ++++||.. ...|+
T Consensus 580 ~AellPed--K~~~V~~l~~~----g---~~VamVGDGINDAPALA~Ad--------------VGiAmG~GtDvA~eaAD 636 (713)
T COG2217 580 RAELLPED--KAEIVRELQAE----G---RKVAMVGDGINDAPALAAAD--------------VGIAMGSGTDVAIEAAD 636 (713)
T ss_pred eccCCcHH--HHHHHHHHHhc----C---CEEEEEeCCchhHHHHhhcC--------------eeEeecCCcHHHHHhCC
Confidence 45677775 99888888754 3 56999999999999999986 68888874 46788
Q ss_pred eEe--CChhHHHHHHH
Q 044635 806 YYL--DDTVEIVRLMQ 819 (831)
Q Consensus 806 y~l--~d~~eV~~~L~ 819 (831)
.++ +|...|..+++
T Consensus 637 vvL~~~dL~~v~~ai~ 652 (713)
T COG2217 637 VVLMRDDLSAVPEAID 652 (713)
T ss_pred EEEecCCHHHHHHHHH
Confidence 887 57888877765
No 265
>TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490. A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog.
Probab=85.89 E-value=1.3 Score=44.96 Aligned_cols=36 Identities=14% Similarity=0.056 Sum_probs=28.4
Q ss_pred CHHHHHHHHHHhhcCCCeEEEECCCCHhhHHHHhCCC
Q 044635 595 NSKTIDILNSLCRDKNNMVFLVSAKSRKTLAEWFSPC 631 (831)
Q Consensus 595 s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~~ 631 (831)
.+.+.+.|+.+.+ .|..++|+||.....++.+.+.+
T Consensus 89 ~~~~~~~l~~l~~-~g~~v~ivS~s~~~~v~~~~~~l 124 (202)
T TIGR01490 89 YPEARDLIRWHKA-EGHTIVLVSASLTILVKPLARIL 124 (202)
T ss_pred cHHHHHHHHHHHH-CCCEEEEEeCCcHHHHHHHHHHc
Confidence 4566777888765 58999999999988888887654
No 266
>PLN02575 haloacid dehalogenase-like hydrolase
Probab=84.65 E-value=3 Score=46.97 Aligned_cols=72 Identities=10% Similarity=0.089 Sum_probs=53.9
Q ss_pred HHHHHHHHHHHhhhcCCCcccEEEEcCCchhHHHHHHcchhcCCCCCCCCCceEEEEeCCC---CcccceEeCChhHH-H
Q 044635 740 KGLVAKRLLSTMQEREMLPDFVLCVGDDRSDEDMFEVIISSMAGPSIAPRAEVFACTVGRK---PSKAKYYLDDTVEI-V 815 (831)
Q Consensus 740 KG~al~~Ll~~l~~~g~~~d~vla~GD~~NDe~Mf~~a~~~~~~~~~~~~~~~~~v~vG~~---~s~A~y~l~d~~eV-~ 815 (831)
+.......++.+ |+.++++++|||+.+|+.+-+.+|.. .++|+-|.. ...|++++++.+++ +
T Consensus 274 ~Peifl~A~~~l---gl~Peecl~IGDS~~DIeAAk~AGm~-----------~IgV~~~~~~~~l~~Ad~iI~s~~EL~~ 339 (381)
T PLN02575 274 DPEMFIYAAQLL---NFIPERCIVFGNSNQTVEAAHDARMK-----------CVAVASKHPIYELGAADLVVRRLDELSI 339 (381)
T ss_pred CHHHHHHHHHHc---CCCcccEEEEcCCHHHHHHHHHcCCE-----------EEEECCCCChhHhcCCCEEECCHHHHHH
Confidence 456777888887 89999999999999999988888742 234433221 23588999999998 6
Q ss_pred HHHHHHHhhh
Q 044635 816 RLMQGLACVA 825 (831)
Q Consensus 816 ~~L~~L~~~~ 825 (831)
..|+.|+..-
T Consensus 340 ~~l~~l~~~~ 349 (381)
T PLN02575 340 VDLKNLADIE 349 (381)
T ss_pred HHHhhhhhcC
Confidence 6777777654
No 267
>TIGR02251 HIF-SF_euk Dullard-like phosphatase domain. This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031.
Probab=84.54 E-value=2 Score=42.33 Aligned_cols=57 Identities=12% Similarity=0.120 Sum_probs=42.4
Q ss_pred ceeEEecCCCccCCCCCCCC---------------------CCCHHHHHHHHHHhhcCCCeEEEECCCCHhhHHHHhCCC
Q 044635 573 TRAILLDYDGTLMPQASIDK---------------------SPNSKTIDILNSLCRDKNNMVFLVSAKSRKTLAEWFSPC 631 (831)
Q Consensus 573 ~rli~~D~DGTLl~~~~~~~---------------------~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~~ 631 (831)
++.+++|+|+||+....... ..-|.+.+.|..|.+ ...++|.|.-+...+...+..+
T Consensus 1 k~~lvlDLDeTLi~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~RPgl~eFL~~l~~--~yei~I~Ts~~~~yA~~il~~l 78 (162)
T TIGR02251 1 KKTLVLDLDETLVHSTFKMPKVDADFKVPVLIDGKIIPVYVFKRPHVDEFLERVSK--WYELVIFTASLEEYADPVLDIL 78 (162)
T ss_pred CcEEEEcCCCCcCCCCCCCCCCCCceEEEEEecCcEEEEEEEECCCHHHHHHHHHh--cCEEEEEcCCcHHHHHHHHHHH
Confidence 46899999999997432111 023678899999975 4889999988888888877655
No 268
>TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type. The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump.
Probab=83.88 E-value=1.7 Score=55.58 Aligned_cols=149 Identities=17% Similarity=0.207 Sum_probs=88.9
Q ss_pred CCCCCHHHHHHHHHHhhcCCCeEEEECCCCHhhHHHHhCCCCCceEEecCCEEEEeCCCceEEEcCCcCCccHHHHHHHH
Q 044635 591 DKSPNSKTIDILNSLCRDKNNMVFLVSAKSRKTLAEWFSPCENLGIAAEHGYFFRLRRDEEWETCIPVADCGWKQIAEPV 670 (831)
Q Consensus 591 ~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~~~~~~liaenGa~i~~~~~~~w~~~~~~~~~~w~~~v~~i 670 (831)
...+-+++.++++++.+ .|++|+++||........+.+.+ +++..+... .. .. .
T Consensus 644 ~Dp~r~~v~~aI~~l~~-aGIkv~MiTGD~~~tA~~iA~~~---Gi~~~~~~~--~~-~~-----------~-------- 697 (1053)
T TIGR01523 644 YDPPRNESAGAVEKCHQ-AGINVHMLTGDFPETAKAIAQEV---GIIPPNFIH--DR-DE-----------I-------- 697 (1053)
T ss_pred ecCCchhHHHHHHHHHH-CCCEEEEECCCCHHHHHHHHHHc---CCCCccccc--cc-cc-----------c--------
Confidence 44677899999999977 59999999999999998888754 333222110 00 00 0
Q ss_pred HHHHhccCCCeeEeeccceEEEeeccCCCccchHHHHHHHHHHHhHhcCCCeEEEEcCeEEEEEeCCCCHHHHHHHHHHH
Q 044635 671 MKLYTETTDGSTIEDKETALVWSYEDADPDFGSCQAKELLDHLESVLANEPVTVKSGQNLVEVKPQGVNKGLVAKRLLST 750 (831)
Q Consensus 671 l~~~~e~~~gs~ie~k~~~l~~~~~~~d~~~~~~~a~el~~~L~~~l~~~~v~v~~g~~~vEV~p~gvnKG~al~~Ll~~ 750 (831)
... .+..-...+ ... .++ +.+..... .| +-.+.|. .|...++.+.+.
T Consensus 698 -------~~~---------~vitG~~l~-~l~---~~~----l~~~~~~~--~V-----~ar~sP~--~K~~iV~~lq~~ 744 (1053)
T TIGR01523 698 -------MDS---------MVMTGSQFD-ALS---DEE----VDDLKALC--LV-----IARCAPQ--TKVKMIEALHRR 744 (1053)
T ss_pred -------ccc---------eeeehHHhh-hcC---HHH----HHHHhhcC--eE-----EEecCHH--HHHHHHHHHHhc
Confidence 000 000000000 000 011 22222211 11 2234454 599988887654
Q ss_pred hhhcCCCcccEEEEcCCchhHHHHHHcchhcCCCCCCCCCceEEEEeCC-C----CcccceEeC--ChhHHHHHHH
Q 044635 751 MQEREMLPDFVLCVGDDRSDEDMFEVIISSMAGPSIAPRAEVFACTVGR-K----PSKAKYYLD--DTVEIVRLMQ 819 (831)
Q Consensus 751 l~~~g~~~d~vla~GD~~NDe~Mf~~a~~~~~~~~~~~~~~~~~v~vG~-~----~s~A~y~l~--d~~eV~~~L~ 819 (831)
| ..|.++||+.||.+|++.++ ++|+||. . +..|++++. +-..+.+++.
T Consensus 745 ----g---~~Vam~GDGvNDapaLk~Ad--------------VGIAmg~~gt~vak~aADivl~dd~f~~I~~~i~ 799 (1053)
T TIGR01523 745 ----K---AFCAMTGDGVNDSPSLKMAN--------------VGIAMGINGSDVAKDASDIVLSDDNFASILNAIE 799 (1053)
T ss_pred ----C---CeeEEeCCCcchHHHHHhCC--------------ccEecCCCccHHHHHhcCEEEecCCHHHHHHHHH
Confidence 3 46899999999999999997 6888883 2 457888884 4666666553
No 269
>TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact.
Probab=83.07 E-value=1.3 Score=44.03 Aligned_cols=37 Identities=3% Similarity=-0.048 Sum_probs=29.4
Q ss_pred CCHHHHHHHHHHhhcCCCeEEEECCCCHhhHHHHhCCC
Q 044635 594 PNSKTIDILNSLCRDKNNMVFLVSAKSRKTLAEWFSPC 631 (831)
Q Consensus 594 ~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~~ 631 (831)
+.+.+.++|+.|.+ .|..++|+|+.....++.++...
T Consensus 73 l~~g~~~ll~~l~~-~g~~~~i~S~~~~~~~~~~l~~~ 109 (188)
T TIGR01489 73 IDPGFKEFIAFIKE-HGIDFIVISDGNDFFIDPVLEGI 109 (188)
T ss_pred CCccHHHHHHHHHH-cCCcEEEEeCCcHHHHHHHHHHc
Confidence 44568888888865 58999999999988888877653
No 270
>TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein. This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338).
Probab=82.40 E-value=1.4 Score=45.22 Aligned_cols=36 Identities=11% Similarity=0.125 Sum_probs=28.9
Q ss_pred CCHHHHHHHHHHhhcCCCeEEEECCCCHhhHHHHhCCC
Q 044635 594 PNSKTIDILNSLCRDKNNMVFLVSAKSRKTLAEWFSPC 631 (831)
Q Consensus 594 ~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~~ 631 (831)
+.+.+.+.|+.+.+ . ..++|+||-....+..+++.+
T Consensus 69 l~pga~ell~~lk~-~-~~~~IVS~~~~~~~~~il~~l 104 (203)
T TIGR02137 69 PLEGAVEFVDWLRE-R-FQVVILSDTFYEFSQPLMRQL 104 (203)
T ss_pred CCccHHHHHHHHHh-C-CeEEEEeCChHHHHHHHHHHc
Confidence 45677888888876 3 499999999999888887765
No 271
>PRK14988 GMP/IMP nucleotidase; Provisional
Probab=82.18 E-value=2.9 Score=43.48 Aligned_cols=69 Identities=12% Similarity=0.015 Sum_probs=48.5
Q ss_pred HHHHHHHHHHHhhhcCCCcccEEEEcCCchhHHHHHHcchhcCCCCCCCCCceEEEEeCCC--CcccceEeCChhHHHHH
Q 044635 740 KGLVAKRLLSTMQEREMLPDFVLCVGDDRSDEDMFEVIISSMAGPSIAPRAEVFACTVGRK--PSKAKYYLDDTVEIVRL 817 (831)
Q Consensus 740 KG~al~~Ll~~l~~~g~~~d~vla~GD~~NDe~Mf~~a~~~~~~~~~~~~~~~~~v~vG~~--~s~A~y~l~d~~eV~~~ 817 (831)
+-...+++++.+ |++++++++|||+.+|+..=+.+|.. .+++|+.|.. ...|...+.+.+++.++
T Consensus 151 ~p~~~~~~~~~~---~~~p~~~l~igDs~~di~aA~~aG~~----------~~~~v~~~~~~~~~~~~~~~~~~~~~~~~ 217 (224)
T PRK14988 151 DQRLWQAVAEHT---GLKAERTLFIDDSEPILDAAAQFGIR----------YCLGVTNPDSGIAEKQYQRHPSLNDYRRL 217 (224)
T ss_pred CHHHHHHHHHHc---CCChHHEEEEcCCHHHHHHHHHcCCe----------EEEEEeCCCCCccchhccCCCcHHHHHHH
Confidence 356778888888 99999999999999998877777642 1234444443 23444555677777777
Q ss_pred HHHH
Q 044635 818 MQGL 821 (831)
Q Consensus 818 L~~L 821 (831)
|+.|
T Consensus 218 ~~~l 221 (224)
T PRK14988 218 IPSL 221 (224)
T ss_pred hhhh
Confidence 7765
No 272
>PF07429 Glyco_transf_56: 4-alpha-L-fucosyltransferase glycosyl transferase group 56; InterPro: IPR009993 This family contains the bacterial enzyme 4-alpha-L-fucosyltransferase (Fuc4NAc transferase) (approximately 360 residues long). This catalyses the synthesis of Fuc4NAc-ManNAcA-GlcNAc-PP-Und (lipid III) as part of the biosynthetic pathway of enterobacterial common antigen (ECA), a polysaccharide comprised of the trisaccharide repeat unit Fuc4NAc-ManNAcA-GlcNAc [].; GO: 0008417 fucosyltransferase activity, 0009246 enterobacterial common antigen biosynthetic process, 0009276 Gram-negative-bacterium-type cell wall
Probab=82.10 E-value=26 Score=38.72 Aligned_cols=130 Identities=15% Similarity=0.122 Sum_probs=78.2
Q ss_pred cCcccccCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhccCCCCCCccEEEecCCCC
Q 044635 346 DDMDIFKGISLKLLAMEQLLIQHPEWQGKVVLVQIANPARGRGKDVKEVQAETYSTVERINQTFGKPGYDPVVLIDEPLK 425 (831)
Q Consensus 346 dRld~~KGi~~~l~A~~~lL~~~P~~~~~vvLvqig~p~r~~~~~~~~l~~~i~~lv~~IN~~~g~~~~~pv~~~~~~v~ 425 (831)
-.-|++-+....|+++.+... .+ +.++ ..-+ .+...++|.++|.+.+.++ ||.. .+..++..+|
T Consensus 192 NSgd~sNnHieaL~~L~~~~~--~~----~kIi--vPLs--Yg~~n~~Yi~~V~~~~~~l---F~~~---~~~iL~e~mp 255 (360)
T PF07429_consen 192 NSGDPSNNHIEALEALKQQFG--DD----VKII--VPLS--YGANNQAYIQQVIQAGKEL---FGAE---NFQILTEFMP 255 (360)
T ss_pred CCCCCCccHHHHHHHHHHhcC--CC----eEEE--EECC--CCCchHHHHHHHHHHHHHh---cCcc---ceeEhhhhCC
Confidence 346777777777766655321 22 2222 1112 3333566777777776654 4432 3556788999
Q ss_pred HHHHHHHHHHcCEeEECCCcc-CCCC---CCCCCceEEEeccccccccc-CCCcee----CCCCHHHHHHHHHHH
Q 044635 426 FYERIAYYVVAECCLVTAVRD-GSEP---SSPKKSMLVVSEFIGCSPSL-SGAIRV----NPWNIDAVSDAMDSA 491 (831)
Q Consensus 426 ~~el~aly~~ADv~vvtS~~e-Gma~---~~~~~g~lVlSe~~G~~~~l-~~allV----nP~d~~~~A~ai~~a 491 (831)
.+|+.++++.+|+.++...|. ||+- --..+.++++|+-.-....+ ..++.| +.-|...+++|=+++
T Consensus 256 f~eYl~lL~~cDl~if~~~RQQgiGnI~lLl~~G~~v~L~~~np~~~~l~~~~ipVlf~~d~L~~~~v~ea~rql 330 (360)
T PF07429_consen 256 FDEYLALLSRCDLGIFNHNRQQGIGNICLLLQLGKKVFLSRDNPFWQDLKEQGIPVLFYGDELDEALVREAQRQL 330 (360)
T ss_pred HHHHHHHHHhCCEEEEeechhhhHhHHHHHHHcCCeEEEecCChHHHHHHhCCCeEEeccccCCHHHHHHHHHHH
Confidence 999999999999999999875 7720 01225688888876555555 334433 344455555544433
No 273
>TIGR02250 FCP1_euk FCP1-like phosphatase, phosphatase domain. This domain is related to domains found in the human NLI interacting factor-like phosphatases, and together both are detected by the Pfam model pfam03031.
Probab=81.98 E-value=2.1 Score=41.98 Aligned_cols=60 Identities=15% Similarity=0.106 Sum_probs=45.6
Q ss_pred hcCceeEEecCCCccCCCCCCC------C--------------------------CCCHHHHHHHHHHhhcCCCeEEEEC
Q 044635 570 RTTTRAILLDYDGTLMPQASID------K--------------------------SPNSKTIDILNSLCRDKNNMVFLVS 617 (831)
Q Consensus 570 ~s~~rli~~D~DGTLl~~~~~~------~--------------------------~~s~~~~~~L~~L~~d~g~~V~I~S 617 (831)
+.++..+++|+|.||++..... . .+-|.+.+.|++|.+ +..++|+|
T Consensus 3 ~~~kl~LVLDLDeTLihs~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~v~~rPgv~efL~~l~~--~yel~I~T 80 (156)
T TIGR02250 3 REKKLHLVLDLDQTLIHTTKDPTLSEWEKYDIEEPNSETRRDLRKFNLGTMWYLTKLRPFLHEFLKEASK--LYEMHVYT 80 (156)
T ss_pred cCCceEEEEeCCCCcccccccCccchhhhcccccCCccccccceEEEcCCeEEEEEECCCHHHHHHHHHh--hcEEEEEe
Confidence 3578899999999999843210 0 013578899999974 68999999
Q ss_pred CCCHhhHHHHhCCC
Q 044635 618 AKSRKTLAEWFSPC 631 (831)
Q Consensus 618 GR~~~~l~~~~~~~ 631 (831)
..+...+...+..+
T Consensus 81 ~~~~~yA~~vl~~l 94 (156)
T TIGR02250 81 MGTRAYAQAIAKLI 94 (156)
T ss_pred CCcHHHHHHHHHHh
Confidence 99999888887766
No 274
>KOG0206 consensus P-type ATPase [General function prediction only]
Probab=81.92 E-value=5.5 Score=50.62 Aligned_cols=40 Identities=25% Similarity=0.341 Sum_probs=30.9
Q ss_pred EEeCCCCHHHHHHHHHHHhhhcCCCcccEEEEcCCchhHHHHHHcc
Q 044635 733 VKPQGVNKGLVAKRLLSTMQEREMLPDFVLCVGDDRSDEDMFEVII 778 (831)
Q Consensus 733 V~p~gvnKG~al~~Ll~~l~~~g~~~d~vla~GD~~NDe~Mf~~a~ 778 (831)
.+..-.-|+..++.+.+. ....++||||+.||..|++.|.
T Consensus 775 CR~sPlQKA~Vv~lVk~~------~~~~TLAIGDGANDVsMIQ~Ah 814 (1151)
T KOG0206|consen 775 CRVSPLQKALVVKLVKKG------LKAVTLAIGDGANDVSMIQEAH 814 (1151)
T ss_pred ccCCHHHHHHHHHHHHhc------CCceEEEeeCCCccchheeeCC
Confidence 344444599999998443 2456999999999999999875
No 275
>PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional
Probab=81.72 E-value=0.72 Score=46.19 Aligned_cols=37 Identities=11% Similarity=-0.083 Sum_probs=32.2
Q ss_pred HHHHHHHHHHHhhhcCCCcccEEEEcCCchhHHHHHHcch
Q 044635 740 KGLVAKRLLSTMQEREMLPDFVLCVGDDRSDEDMFEVIIS 779 (831)
Q Consensus 740 KG~al~~Ll~~l~~~g~~~d~vla~GD~~NDe~Mf~~a~~ 779 (831)
+-...++.++++ |.+++++++|||+.+|++.=+.+|.
T Consensus 144 ~p~~~~~~~~~~---~~~~~~~l~igDs~~di~aA~~aG~ 180 (188)
T PRK10725 144 APDTFLRCAQLM---GVQPTQCVVFEDADFGIQAARAAGM 180 (188)
T ss_pred ChHHHHHHHHHc---CCCHHHeEEEeccHhhHHHHHHCCC
Confidence 456788888888 8899999999999999999888874
No 276
>PLN03243 haloacid dehalogenase-like hydrolase; Provisional
Probab=81.16 E-value=4.1 Score=43.50 Aligned_cols=69 Identities=10% Similarity=0.140 Sum_probs=50.6
Q ss_pred HHHHHHHHHHhhhcCCCcccEEEEcCCchhHHHHHHcchhcCCCCCCCCCceEEEEeCCC----CcccceEeCChhHHHH
Q 044635 741 GLVAKRLLSTMQEREMLPDFVLCVGDDRSDEDMFEVIISSMAGPSIAPRAEVFACTVGRK----PSKAKYYLDDTVEIVR 816 (831)
Q Consensus 741 G~al~~Ll~~l~~~g~~~d~vla~GD~~NDe~Mf~~a~~~~~~~~~~~~~~~~~v~vG~~----~s~A~y~l~d~~eV~~ 816 (831)
-......++++ |++++.+++|||+.+|+.+=+.+|.. +++|+ |.. ...|++++++..++..
T Consensus 168 Pe~~~~a~~~l---~~~p~~~l~IgDs~~Di~aA~~aG~~-----------~i~v~-g~~~~~~l~~ad~vi~~~~el~~ 232 (260)
T PLN03243 168 PEMFMYAAERL---GFIPERCIVFGNSNSSVEAAHDGCMK-----------CVAVA-GKHPVYELSAGDLVVRRLDDLSV 232 (260)
T ss_pred HHHHHHHHHHh---CCChHHeEEEcCCHHHHHHHHHcCCE-----------EEEEe-cCCchhhhccCCEEeCCHHHHHH
Confidence 46677888887 99999999999999999999998752 24554 432 2468899999888764
Q ss_pred H-HHHHHhh
Q 044635 817 L-MQGLACV 824 (831)
Q Consensus 817 ~-L~~L~~~ 824 (831)
. ++.|++.
T Consensus 233 ~~~~~~~~~ 241 (260)
T PLN03243 233 VDLKNLSDL 241 (260)
T ss_pred HHHhhhhcc
Confidence 4 3445443
No 277
>COG3882 FkbH Predicted enzyme involved in methoxymalonyl-ACP biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=80.82 E-value=4.3 Score=46.16 Aligned_cols=75 Identities=16% Similarity=0.258 Sum_probs=56.2
Q ss_pred CCHHHHHHHHHhcCceeEEecCCCccCCCCC-------------CCCCCCHHHHHHHHHHhhcCCCeEEEECCCCHhhHH
Q 044635 559 LSMEHIVSAYKRTTTRAILLDYDGTLMPQAS-------------IDKSPNSKTIDILNSLCRDKNNMVFLVSAKSRKTLA 625 (831)
Q Consensus 559 l~~~~~~~~y~~s~~rli~~D~DGTLl~~~~-------------~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~ 625 (831)
-.+..++.|-....+|.+++|+|+||..-.- ..+.+-.+..+.+..|.+ .|..++|||=.....+.
T Consensus 208 ~ei~Sl~~A~~g~~kK~LVLDLDNTLWGGVIGedGv~GI~Ls~~~~G~~fk~fQ~~Ik~l~k-qGVlLav~SKN~~~da~ 286 (574)
T COG3882 208 DEIASLLAAMSGKSKKALVLDLDNTLWGGVIGEDGVDGIRLSNSAEGEAFKTFQNFIKGLKK-QGVLLAVCSKNTEKDAK 286 (574)
T ss_pred HHHHHHHHHhhCcccceEEEecCCcccccccccccccceeecCCCCchhHHHHHHHHHHHHh-ccEEEEEecCCchhhHH
Confidence 3456677777777899999999999996210 112233567778888876 69999999999999999
Q ss_pred HHhCCCCCc
Q 044635 626 EWFSPCENL 634 (831)
Q Consensus 626 ~~~~~~~~~ 634 (831)
+.|...|..
T Consensus 287 evF~khp~M 295 (574)
T COG3882 287 EVFRKHPDM 295 (574)
T ss_pred HHHhhCCCe
Confidence 999876543
No 278
>KOG3040 consensus Predicted sugar phosphatase (HAD superfamily) [General function prediction only]
Probab=79.86 E-value=19 Score=36.71 Aligned_cols=55 Identities=24% Similarity=0.362 Sum_probs=38.7
Q ss_pred cCceeEEecCCCccCCCCCCCCCCCHHHHHHHHHHhhcCCCeEEEECCCC---HhhHHHHhCC
Q 044635 571 TTTRAILLDYDGTLMPQASIDKSPNSKTIDILNSLCRDKNNMVFLVSAKS---RKTLAEWFSP 630 (831)
Q Consensus 571 s~~rli~~D~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~---~~~l~~~~~~ 630 (831)
+..+-+++|+-|||-. .+. ..|...++|++|.. .+..|=++|--+ ...+.+.+..
T Consensus 5 ~~v~gvLlDlSGtLh~---e~~-avpga~eAl~rLr~-~~~kVkFvTNttk~Sk~~l~~rL~r 62 (262)
T KOG3040|consen 5 RAVKGVLLDLSGTLHI---EDA-AVPGAVEALKRLRD-QHVKVKFVTNTTKESKRNLHERLQR 62 (262)
T ss_pred cccceEEEeccceEec---ccc-cCCCHHHHHHHHHh-cCceEEEEecCcchhHHHHHHHHHH
Confidence 3567899999999997 333 56788899999974 477777765544 4455554443
No 279
>COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism]
Probab=79.85 E-value=2.2 Score=42.78 Aligned_cols=45 Identities=24% Similarity=0.231 Sum_probs=33.9
Q ss_pred ceeEEecCCCccCCCCC-CC-----CCCCHHHHHHHHHHhhcCCCeEEEECC
Q 044635 573 TRAILLDYDGTLMPQAS-ID-----KSPNSKTIDILNSLCRDKNNMVFLVSA 618 (831)
Q Consensus 573 ~rli~~D~DGTLl~~~~-~~-----~~~s~~~~~~L~~L~~d~g~~V~I~SG 618 (831)
.+++|+|-||||.-..+ .. -...+.++++|.+|.+ .|..++|+|-
T Consensus 5 ~k~lflDRDGtin~d~~~yv~~~~~~~~~~g~i~al~~l~~-~gy~lVvvTN 55 (181)
T COG0241 5 QKALFLDRDGTINIDKGDYVDSLDDFQFIPGVIPALLKLQR-AGYKLVVVTN 55 (181)
T ss_pred CcEEEEcCCCceecCCCcccCcHHHhccCccHHHHHHHHHh-CCCeEEEEEC
Confidence 68999999999997432 11 1235788999999976 5888888874
No 280
>PRK11587 putative phosphatase; Provisional
Probab=79.76 E-value=0.86 Score=47.11 Aligned_cols=60 Identities=10% Similarity=-0.059 Sum_probs=42.7
Q ss_pred HHHHHHHHHHhhhcCCCcccEEEEcCCchhHHHHHHcchhcCCCCCCCCCceEEEEeCCC---CcccceEeCChhHH
Q 044635 741 GLVAKRLLSTMQEREMLPDFVLCVGDDRSDEDMFEVIISSMAGPSIAPRAEVFACTVGRK---PSKAKYYLDDTVEI 814 (831)
Q Consensus 741 G~al~~Ll~~l~~~g~~~d~vla~GD~~NDe~Mf~~a~~~~~~~~~~~~~~~~~v~vG~~---~s~A~y~l~d~~eV 814 (831)
.......++.+ |++++++++|||+.+|+..=+.+|.. .++|+-|.. ...|++++++..++
T Consensus 141 p~~~~~~~~~~---g~~p~~~l~igDs~~di~aA~~aG~~-----------~i~v~~~~~~~~~~~~~~~~~~~~el 203 (218)
T PRK11587 141 PDAYLLGAQLL---GLAPQECVVVEDAPAGVLSGLAAGCH-----------VIAVNAPADTPRLDEVDLVLHSLEQL 203 (218)
T ss_pred cHHHHHHHHHc---CCCcccEEEEecchhhhHHHHHCCCE-----------EEEECCCCchhhhccCCEEecchhhe
Confidence 45666777777 99999999999999999888887741 233433321 24577888877765
No 281
>COG3700 AphA Acid phosphatase (class B) [General function prediction only]
Probab=79.74 E-value=2.6 Score=41.53 Aligned_cols=72 Identities=13% Similarity=0.180 Sum_probs=51.7
Q ss_pred ccCCHHHHHHHHHhcCceeEEecCCCccCCCCC------------------------------CCCCCCHHHHHHHHHHh
Q 044635 557 KKLSMEHIVSAYKRTTTRAILLDYDGTLMPQAS------------------------------IDKSPNSKTIDILNSLC 606 (831)
Q Consensus 557 ~~l~~~~~~~~y~~s~~rli~~D~DGTLl~~~~------------------------------~~~~~s~~~~~~L~~L~ 606 (831)
.-.++++|.......+.-.+-||+|.|++-..+ ....++.++...|-.+.
T Consensus 47 hwiSvaqI~~SLeG~~Pi~VsFDIDDTvLFsSp~F~~Gk~~~sPgs~DyLknq~FW~~vn~g~D~~SIPKevA~qLI~MH 126 (237)
T COG3700 47 HWISVAQIENSLEGRPPIAVSFDIDDTVLFSSPGFWRGKKYFSPGSEDYLKNQVFWEKVNNGWDEFSIPKEVARQLIDMH 126 (237)
T ss_pred eEEEHHHHHhhhcCCCCeeEeeccCCeeEecccccccCccccCCChHHhhcCHHHHHHHhcCCccccchHHHHHHHHHHH
Confidence 346788898888877777888899999995321 01134566666666677
Q ss_pred hcCCCeEEEECCCCHhhHHHHh
Q 044635 607 RDKNNMVFLVSAKSRKTLAEWF 628 (831)
Q Consensus 607 ~d~g~~V~I~SGR~~~~l~~~~ 628 (831)
...|-.++++|||+....+..-
T Consensus 127 q~RGD~i~FvTGRt~gk~d~vs 148 (237)
T COG3700 127 QRRGDAIYFVTGRTPGKTDTVS 148 (237)
T ss_pred HhcCCeEEEEecCCCCcccccc
Confidence 7679999999999987554433
No 282
>PF13579 Glyco_trans_4_4: Glycosyl transferase 4-like domain; PDB: 3C4Q_B 3C4V_A 3C48_B 1Z2T_A.
Probab=79.71 E-value=1.6 Score=41.47 Aligned_cols=68 Identities=16% Similarity=0.159 Sum_probs=39.7
Q ss_pred CCEEEEeCccccchHHHHHhhcCCCeEEEEEeccCCChHHhhcCCChHHH-----HHHHhcCCeEeecCHHhHHHHHH
Q 044635 202 DDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYKTLPIREEI-----LRALLNSDLIGFHTFDYARHFLS 274 (831)
Q Consensus 202 ~d~vwvhDyhL~llp~~lr~~~~~~~i~~flH~PfP~~e~f~~lp~r~ei-----l~~ll~~dligf~t~~~~~~Fl~ 274 (831)
-|+|.+|+++..++..+++++ .++|+.+.+|-.+.... .++...+ -..+-.||.|-..+....+.+.+
T Consensus 74 ~Dvv~~~~~~~~~~~~~~~~~-~~~p~v~~~h~~~~~~~----~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~l~~ 146 (160)
T PF13579_consen 74 PDVVHAHSPTAGLVAALARRR-RGIPLVVTVHGTLFRRG----SRWKRRLYRWLERRLLRRADRVIVVSEAMRRYLRR 146 (160)
T ss_dssp -SEEEEEHHHHHHHHHHHHHH-HT--EEEE-SS-T----------HHHHHHHHHHHHHHHH-SEEEESSHHHHHHHHH
T ss_pred CeEEEecccchhHHHHHHHHc-cCCcEEEEECCCchhhc----cchhhHHHHHHHHHHHhcCCEEEECCHHHHHHHHH
Confidence 489999999877777777733 48999999997443221 1222222 24444589988888877776654
No 283
>COG4030 Uncharacterized protein conserved in archaea [Function unknown]
Probab=79.43 E-value=2 Score=43.90 Aligned_cols=38 Identities=18% Similarity=0.190 Sum_probs=28.9
Q ss_pred CHHHHHHHHHHHhhhcCCCcccEEEEcCCchhHHHHHHcchh
Q 044635 739 NKGLVAKRLLSTMQEREMLPDFVLCVGDDRSDEDMFEVIISS 780 (831)
Q Consensus 739 nKG~al~~Ll~~l~~~g~~~d~vla~GD~~NDe~Mf~~a~~~ 780 (831)
-|...++.+++.- +++.. ++|+|||.+|.+||+.+...
T Consensus 191 ~ka~i~e~~~ele---~~d~s-a~~VGDSItDv~ml~~~rgr 228 (315)
T COG4030 191 EKAKIMEGYCELE---GIDFS-AVVVGDSITDVKMLEAARGR 228 (315)
T ss_pred chhHHHHHHHhhc---CCCcc-eeEecCcccchHHHHHhhcc
Confidence 4666677777653 55444 79999999999999999753
No 284
>PLN02575 haloacid dehalogenase-like hydrolase
Probab=79.33 E-value=2.8 Score=47.16 Aligned_cols=34 Identities=26% Similarity=0.283 Sum_probs=25.5
Q ss_pred HHHHHHHHHhhcCCCeEEEECCCCHhhHHHHhCCC
Q 044635 597 KTIDILNSLCRDKNNMVFLVSAKSRKTLAEWFSPC 631 (831)
Q Consensus 597 ~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~~ 631 (831)
.+.++|+.|.+ .|..++|+|+++...+...++.+
T Consensus 220 Ga~ElL~~Lk~-~GiklaIaSn~~~~~~~~~L~~l 253 (381)
T PLN02575 220 GSQEFVNVLMN-YKIPMALVSTRPRKTLENAIGSI 253 (381)
T ss_pred CHHHHHHHHHH-CCCeEEEEeCCCHHHHHHHHHHc
Confidence 34456777765 58899999999988888877654
No 285
>COG3914 Spy Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones]
Probab=78.37 E-value=22 Score=41.65 Aligned_cols=110 Identities=20% Similarity=0.181 Sum_probs=75.9
Q ss_pred cCCcEEEEeccCcccccCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhccCCCCCCc
Q 044635 336 DQGKVMLLGVDDMDIFKGISLKLLAMEQLLIQHPEWQGKVVLVQIANPARGRGKDVKEVQAETYSTVERINQTFGKPGYD 415 (831)
Q Consensus 336 ~~~~~iil~VdRld~~KGi~~~l~A~~~lL~~~P~~~~~vvLvqig~p~r~~~~~~~~l~~~i~~lv~~IN~~~g~~~~~ 415 (831)
+++-.+.++..+ +.|=.++.+.-.-++|+.-|+-. |++-+.+ +..+..+.+++++++- | .+..
T Consensus 427 p~~avVf~c~~n--~~K~~pev~~~wmqIL~~vP~Sv----l~L~~~~------~~~~~~~~l~~la~~~----G-v~~e 489 (620)
T COG3914 427 PEDAVVFCCFNN--YFKITPEVFALWMQILSAVPNSV----LLLKAGG------DDAEINARLRDLAERE----G-VDSE 489 (620)
T ss_pred CCCeEEEEecCC--cccCCHHHHHHHHHHHHhCCCcE----EEEecCC------CcHHHHHHHHHHHHHc----C-CChh
Confidence 444556666665 47778889988899999999864 6666532 3356677777777763 3 2444
Q ss_pred cEEEecCCCCHHHHHHHHHHcCEeEECCCccCC--CCCCCCCceEEEecc
Q 044635 416 PVVLIDEPLKFYERIAYYVVAECCLVTAVRDGS--EPSSPKKSMLVVSEF 463 (831)
Q Consensus 416 pv~~~~~~v~~~el~aly~~ADv~vvtS~~eGm--a~~~~~~g~lVlSe~ 463 (831)
..+|. .+.+.++-.|.|..||+++-|=-+-|= +.++---|++|++-.
T Consensus 490 RL~f~-p~~~~~~h~a~~~iADlvLDTyPY~g~TTa~daLwm~vPVlT~~ 538 (620)
T COG3914 490 RLRFL-PPAPNEDHRARYGIADLVLDTYPYGGHTTASDALWMGVPVLTRV 538 (620)
T ss_pred heeec-CCCCCHHHHHhhchhheeeecccCCCccchHHHHHhcCceeeec
Confidence 56654 478888999999999999988777665 223333467777643
No 286
>COG0816 Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis) [DNA replication, recombination, and repair]
Probab=77.75 E-value=13 Score=35.84 Aligned_cols=73 Identities=25% Similarity=0.248 Sum_probs=55.4
Q ss_pred HHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhccCCCCCCccEEEecCCCCHHHHHHHHHH
Q 044635 356 LKLLAMEQLLIQHPEWQGKVVLVQIANPARGRGKDVKEVQAETYSTVERINQTFGKPGYDPVVLIDEPLKFYERIAYYVV 435 (831)
Q Consensus 356 ~~l~A~~~lL~~~P~~~~~vvLvqig~p~r~~~~~~~~l~~~i~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ 435 (831)
.-+.++..+++++ ++..|.||.|-..++..+. ..+.++..++++..+|+. ||++.....+-.+-...+..
T Consensus 40 ~~~~~l~~li~~~-----~~~~vVVGlP~~m~g~~~~-~~~~~~~f~~~L~~r~~l----pv~l~DERltTv~A~~~L~~ 109 (141)
T COG0816 40 QDFNALLKLVKEY-----QVDTVVVGLPLNMDGTEGP-RAELARKFAERLKKRFNL----PVVLWDERLSTVEAERMLIE 109 (141)
T ss_pred hhHHHHHHHHHHh-----CCCEEEEecCcCCCCCcch-hHHHHHHHHHHHHHhcCC----CEEEEcCccCHHHHHHHHHH
Confidence 3455666666665 3568999999877777665 677899999999999974 89999988888777777766
Q ss_pred cCE
Q 044635 436 AEC 438 (831)
Q Consensus 436 ADv 438 (831)
+++
T Consensus 110 ~~~ 112 (141)
T COG0816 110 AGV 112 (141)
T ss_pred cCC
Confidence 543
No 287
>TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase. Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes.
Probab=77.68 E-value=1.5 Score=44.66 Aligned_cols=36 Identities=17% Similarity=0.118 Sum_probs=30.6
Q ss_pred HHHHHHHHHHhhhcCCCcccEEEEcCCc-hhHHHHHHcch
Q 044635 741 GLVAKRLLSTMQEREMLPDFVLCVGDDR-SDEDMFEVIIS 779 (831)
Q Consensus 741 G~al~~Ll~~l~~~g~~~d~vla~GD~~-NDe~Mf~~a~~ 779 (831)
....+++++.+ |.+++++++|||+. +|+..-+.+|.
T Consensus 163 ~~~~~~~~~~~---~~~~~~~~~IgD~~~~Di~~A~~aG~ 199 (203)
T TIGR02252 163 PKIFQEALERA---GISPEEALHIGDSLRNDYQGARAAGW 199 (203)
T ss_pred HHHHHHHHHHc---CCChhHEEEECCCchHHHHHHHHcCC
Confidence 35678888887 89999999999997 89998888874
No 288
>PRK11590 hypothetical protein; Provisional
Probab=77.60 E-value=2.6 Score=43.35 Aligned_cols=38 Identities=13% Similarity=0.087 Sum_probs=27.3
Q ss_pred CCCHHHHHHHHHHHhhhcCCCcccEEEEcCCchhHHHHHHcchh
Q 044635 737 GVNKGLVAKRLLSTMQEREMLPDFVLCVGDDRSDEDMFEVIISS 780 (831)
Q Consensus 737 gvnKG~al~~Ll~~l~~~g~~~d~vla~GD~~NDe~Mf~~a~~~ 780 (831)
|-.|-..++..+ +.+.+...+.|||.||.+||+.+++.
T Consensus 161 g~~K~~~l~~~~------~~~~~~~~aY~Ds~~D~pmL~~a~~~ 198 (211)
T PRK11590 161 GHEKVAQLERKI------GTPLRLYSGYSDSKQDNPLLYFCQHR 198 (211)
T ss_pred ChHHHHHHHHHh------CCCcceEEEecCCcccHHHHHhCCCC
Confidence 444544444433 44566778999999999999999863
No 289
>KOG0208 consensus Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=77.37 E-value=9.3 Score=47.12 Aligned_cols=78 Identities=19% Similarity=0.336 Sum_probs=44.6
Q ss_pred ceeEeecCcccccCCHHHHHHHHHhcCceeEEecCC--CccCCCCCCCCCCCHHHHHHHHHHhhcCCCeEEEECCCCHhh
Q 044635 546 SFRVVALDPNFKKLSMEHIVSAYKRTTTRAILLDYD--GTLMPQASIDKSPNSKTIDILNSLCRDKNNMVFLVSAKSRKT 623 (831)
Q Consensus 546 ~~~~~~~~~~f~~l~~~~~~~~y~~s~~rli~~D~D--GTLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~ 623 (831)
||||+|+-. +.|......++ ++.++--+=+|++ |=++- ..+.-+++..++++|.+ .++..+.|||-+...
T Consensus 663 GfRVIAlA~--K~L~~~~~~~~-~~~~Rd~vEs~l~FlGLiVm----eNkLK~~T~~VI~eL~~-AnIRtVMcTGDNllT 734 (1140)
T KOG0208|consen 663 GFRVIALAS--KELETSTLQKA-QKLSRDTVESNLEFLGLIVM----ENKLKEETKRVIDELNR-ANIRTVMCTGDNLLT 734 (1140)
T ss_pred CeEEEEEec--CccCcchHHHH-hhccHhhhhccceeeEEEEe----ecccccccHHHHHHHHh-hcceEEEEcCCchhe
Confidence 577777753 33444322222 3333333333332 32332 23455677778888866 489999999999876
Q ss_pred HHHHhCCC
Q 044635 624 LAEWFSPC 631 (831)
Q Consensus 624 l~~~~~~~ 631 (831)
.-...+++
T Consensus 735 aisVakeC 742 (1140)
T KOG0208|consen 735 AISVAKEC 742 (1140)
T ss_pred eeehhhcc
Confidence 65555543
No 290
>TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase. All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509).
Probab=77.25 E-value=2.3 Score=42.33 Aligned_cols=36 Identities=6% Similarity=-0.116 Sum_probs=31.0
Q ss_pred HHHHHHHHHHhhhcCCCcccEEEEcCCchhHHHHHHcch
Q 044635 741 GLVAKRLLSTMQEREMLPDFVLCVGDDRSDEDMFEVIIS 779 (831)
Q Consensus 741 G~al~~Ll~~l~~~g~~~d~vla~GD~~NDe~Mf~~a~~ 779 (831)
....+++++.+ +.+++.+++|||+.+|+.+-+.+|.
T Consensus 145 ~~~~~~~~~~~---~~~~~~~v~IgD~~~di~aA~~~G~ 180 (185)
T TIGR02009 145 PETFLLAAELL---GVSPNECVVFEDALAGVQAARAAGM 180 (185)
T ss_pred hHHHHHHHHHc---CCCHHHeEEEeCcHhhHHHHHHCCC
Confidence 45667788877 8999999999999999999998874
No 291
>TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549).
Probab=77.19 E-value=4.2 Score=41.75 Aligned_cols=37 Identities=16% Similarity=0.106 Sum_probs=31.9
Q ss_pred HHHHHHHHHHHhhhcCCCcccEEEEcCCc-hhHHHHHHcch
Q 044635 740 KGLVAKRLLSTMQEREMLPDFVLCVGDDR-SDEDMFEVIIS 779 (831)
Q Consensus 740 KG~al~~Ll~~l~~~g~~~d~vla~GD~~-NDe~Mf~~a~~ 779 (831)
+....+.+++.+ |++++++++|||+. +|+.+=+.+|.
T Consensus 152 ~~~~~~~~~~~~---~~~~~~~~~igDs~~~di~~A~~aG~ 189 (221)
T TIGR02253 152 HPKIFYAALKRL---GVKPEEAVMVGDRLDKDIKGAKNLGM 189 (221)
T ss_pred CHHHHHHHHHHc---CCChhhEEEECCChHHHHHHHHHCCC
Confidence 345678888887 89999999999997 99999999875
No 292
>TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB. The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene.
Probab=76.86 E-value=2.7 Score=43.32 Aligned_cols=15 Identities=47% Similarity=0.747 Sum_probs=13.6
Q ss_pred CceeEEecCCCccCC
Q 044635 572 TTRAILLDYDGTLMP 586 (831)
Q Consensus 572 ~~rli~~D~DGTLl~ 586 (831)
.+|+.+||+||||+.
T Consensus 4 ~~~la~FDfDgTLt~ 18 (210)
T TIGR01545 4 AKRIIFFDLDGTLHQ 18 (210)
T ss_pred cCcEEEEcCCCCCcc
Confidence 578999999999998
No 293
>KOG3109 consensus Haloacid dehalogenase-like hydrolase [General function prediction only]
Probab=76.56 E-value=3.1 Score=42.56 Aligned_cols=67 Identities=12% Similarity=0.088 Sum_probs=46.9
Q ss_pred HHHHHHHHHhhhcCCC-cccEEEEcCCchhHHHHHHcchhcCCCCCCCCCceEEEEeCCC--CcccceEeCChhHHHHHH
Q 044635 742 LVAKRLLSTMQEREML-PDFVLCVGDDRSDEDMFEVIISSMAGPSIAPRAEVFACTVGRK--PSKAKYYLDDTVEIVRLM 818 (831)
Q Consensus 742 ~al~~Ll~~l~~~g~~-~d~vla~GD~~NDe~Mf~~a~~~~~~~~~~~~~~~~~v~vG~~--~s~A~y~l~d~~eV~~~L 818 (831)
.|.++.++.. |+. |.+++.|-||.+.+.-=+.+|. -+|-||.. .-.++|.|.+.....+.+
T Consensus 164 ~afE~a~k~a---gi~~p~~t~FfDDS~~NI~~ak~vGl-------------~tvlv~~~~~~~~~d~~l~~ih~~k~a~ 227 (244)
T KOG3109|consen 164 EAFEKAMKVA---GIDSPRNTYFFDDSERNIQTAKEVGL-------------KTVLVGREHKIKGVDYALEQIHNNKEAL 227 (244)
T ss_pred HHHHHHHHHh---CCCCcCceEEEcCchhhHHHHHhccc-------------eeEEEEeeecccchHHHHHHhhchhhhc
Confidence 4556666655 887 9999999999999988888875 46777743 456667676665555555
Q ss_pred HHHHhh
Q 044635 819 QGLACV 824 (831)
Q Consensus 819 ~~L~~~ 824 (831)
-.|.++
T Consensus 228 p~l~~~ 233 (244)
T KOG3109|consen 228 PELWEI 233 (244)
T ss_pred hHHhhc
Confidence 555544
No 294
>PRK11587 putative phosphatase; Provisional
Probab=76.47 E-value=5.5 Score=41.05 Aligned_cols=30 Identities=20% Similarity=0.286 Sum_probs=20.7
Q ss_pred CceeEEecCCCccCCCCCCCCCCCHHHHHHHHHHhhc
Q 044635 572 TTRAILLDYDGTLMPQASIDKSPNSKTIDILNSLCRD 608 (831)
Q Consensus 572 ~~rli~~D~DGTLl~~~~~~~~~s~~~~~~L~~L~~d 608 (831)
+++.|+||+||||++. . +...++++++.++
T Consensus 2 ~~k~viFDlDGTL~Ds---~----~~~~~a~~~~~~~ 31 (218)
T PRK11587 2 RCKGFLFDLDGTLVDS---L----PAVERAWSNWADR 31 (218)
T ss_pred CCCEEEEcCCCCcCcC---H----HHHHHHHHHHHHH
Confidence 4689999999999992 2 3444555555553
No 295
>TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544. This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.
Probab=76.00 E-value=2.6 Score=45.23 Aligned_cols=38 Identities=18% Similarity=0.174 Sum_probs=30.1
Q ss_pred CCCHHHHHH-HHHHHhhhcC--CCcccEEEEcCCchhHHHHHHc
Q 044635 737 GVNKGLVAK-RLLSTMQERE--MLPDFVLCVGDDRSDEDMFEVI 777 (831)
Q Consensus 737 gvnKG~al~-~Ll~~l~~~g--~~~d~vla~GD~~NDe~Mf~~a 777 (831)
..+|...+. ...+++ + .++++++++||+.||+.|..-+
T Consensus 190 ~~~K~~~v~~~~~~~~---~~~~~~~~vI~vGDs~~Dl~ma~g~ 230 (277)
T TIGR01544 190 TFNKNHDVALRNTEYF---NQLKDRSNIILLGDSQGDLRMADGV 230 (277)
T ss_pred ccccHHHHHHHHHHHh---CccCCcceEEEECcChhhhhHhcCC
Confidence 357877665 466666 5 7889999999999999997666
No 296
>PF06941 NT5C: 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C); InterPro: IPR010708 This family consists of several 5' nucleotidase, deoxy (Pyrimidine), and cytosolic type C (NT5C) proteins. 5'(3')-deoxyribonucleotidase is a ubiquitous enzyme in mammalian cells whose physiological function is not known [].; GO: 0016791 phosphatase activity; PDB: 1Z4M_A 1Q92_A 1Q91_A 1Z4J_A 1Z4I_A 1Z4Q_A 1Z4K_A 2JAW_A 1MH9_A 1Z4L_A ....
Probab=75.96 E-value=2.2 Score=43.22 Aligned_cols=28 Identities=18% Similarity=0.421 Sum_probs=20.4
Q ss_pred CCHHHHHHHHHHhhcCCCeEEEECCCCHh
Q 044635 594 PNSKTIDILNSLCRDKNNMVFLVSAKSRK 622 (831)
Q Consensus 594 ~s~~~~~~L~~L~~d~g~~V~I~SGR~~~ 622 (831)
|-+.+.++|++|.+ .|..++++|+|+..
T Consensus 74 p~~gA~e~l~~L~~-~g~~~~~Itar~~~ 101 (191)
T PF06941_consen 74 PIPGAVEALKKLRD-KGHEIVIITARPPE 101 (191)
T ss_dssp B-TTHHHHHHHHHT-STTEEEEEEE-SSS
T ss_pred ccHHHHHHHHHHHH-cCCcEEEEEecCcc
Confidence 45678899999986 47788888888754
No 297
>TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549).
Probab=75.79 E-value=3 Score=42.83 Aligned_cols=14 Identities=43% Similarity=0.721 Sum_probs=13.1
Q ss_pred ceeEEecCCCccCC
Q 044635 573 TRAILLDYDGTLMP 586 (831)
Q Consensus 573 ~rli~~D~DGTLl~ 586 (831)
.++++||+||||++
T Consensus 2 ~~~viFDlDGTL~d 15 (221)
T TIGR02253 2 IKAIFFDLDDTLID 15 (221)
T ss_pred ceEEEEeCCCCCcC
Confidence 57999999999999
No 298
>PLN03243 haloacid dehalogenase-like hydrolase; Provisional
Probab=75.67 E-value=3.3 Score=44.29 Aligned_cols=35 Identities=14% Similarity=0.352 Sum_probs=23.0
Q ss_pred hcCceeEEecCCCccCCCCCCCCCCCHHH-HHHHHHHhhcCCC
Q 044635 570 RTTTRAILLDYDGTLMPQASIDKSPNSKT-IDILNSLCRDKNN 611 (831)
Q Consensus 570 ~s~~rli~~D~DGTLl~~~~~~~~~s~~~-~~~L~~L~~d~g~ 611 (831)
....++|+||+||||++. . +.. .++++++.++-|.
T Consensus 21 ~~~~k~vIFDlDGTLvDS---~----~~~~~~a~~~~~~~~G~ 56 (260)
T PLN03243 21 GCGWLGVVLEWEGVIVED---D----SELERKAWRALAEEEGK 56 (260)
T ss_pred cCCceEEEEeCCCceeCC---c----hHHHHHHHHHHHHHcCC
Confidence 456899999999999982 1 233 3466666554343
No 299
>PRK10748 flavin mononucleotide phosphatase; Provisional
Probab=75.23 E-value=1.7 Score=45.72 Aligned_cols=37 Identities=16% Similarity=-0.025 Sum_probs=30.8
Q ss_pred HHHHHHHHHHHhhhcCCCcccEEEEcCC-chhHHHHHHcch
Q 044635 740 KGLVAKRLLSTMQEREMLPDFVLCVGDD-RSDEDMFEVIIS 779 (831)
Q Consensus 740 KG~al~~Ll~~l~~~g~~~d~vla~GD~-~NDe~Mf~~a~~ 779 (831)
+.......++.+ |++++++++|||+ ..|+..=+.+|.
T Consensus 165 ~p~~~~~a~~~~---~~~~~~~~~VGD~~~~Di~~A~~aG~ 202 (238)
T PRK10748 165 FSDMYHLAAEKL---NVPIGEILHVGDDLTTDVAGAIRCGM 202 (238)
T ss_pred cHHHHHHHHHHc---CCChhHEEEEcCCcHHHHHHHHHCCC
Confidence 355667777777 8999999999999 599999888874
No 300
>TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548. All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's.
Probab=75.08 E-value=1.3 Score=44.87 Aligned_cols=33 Identities=12% Similarity=-0.106 Sum_probs=26.7
Q ss_pred HHHHHHHHHHHhhhcCCCcccEEEEcCCchhHHHHH
Q 044635 740 KGLVAKRLLSTMQEREMLPDFVLCVGDDRSDEDMFE 775 (831)
Q Consensus 740 KG~al~~Ll~~l~~~g~~~d~vla~GD~~NDe~Mf~ 775 (831)
+-..+..+++.+ |++++++++|||+.+|+.+-+
T Consensus 163 ~p~~~~~~~~~~---~~~~~~~i~vGD~~~Di~aA~ 195 (197)
T TIGR01548 163 NPEPLILAAKAL---GVEACHAAMVGDTVDDIITGR 195 (197)
T ss_pred CHHHHHHHHHHh---CcCcccEEEEeCCHHHHHHHH
Confidence 445567777777 899999999999999987654
No 301
>PRK10563 6-phosphogluconate phosphatase; Provisional
Probab=74.56 E-value=2.9 Score=43.12 Aligned_cols=37 Identities=8% Similarity=-0.068 Sum_probs=32.6
Q ss_pred HHHHHHHHHHHhhhcCCCcccEEEEcCCchhHHHHHHcch
Q 044635 740 KGLVAKRLLSTMQEREMLPDFVLCVGDDRSDEDMFEVIIS 779 (831)
Q Consensus 740 KG~al~~Ll~~l~~~g~~~d~vla~GD~~NDe~Mf~~a~~ 779 (831)
+.......++.+ |++++++++|||+.+|+..-+.+|.
T Consensus 144 ~p~~~~~a~~~~---~~~p~~~l~igDs~~di~aA~~aG~ 180 (221)
T PRK10563 144 DPALMFHAAEAM---NVNVENCILVDDSSAGAQSGIAAGM 180 (221)
T ss_pred ChHHHHHHHHHc---CCCHHHeEEEeCcHhhHHHHHHCCC
Confidence 567888888888 8999999999999999998888874
No 302
>PRK09449 dUMP phosphatase; Provisional
Probab=74.02 E-value=9.5 Score=39.27 Aligned_cols=65 Identities=18% Similarity=0.019 Sum_probs=45.5
Q ss_pred HHHHHHHHHHhhhcCCC-cccEEEEcCCc-hhHHHHHHcchhcCCCCCCCCCceEEEEeCCC----CcccceEeCChhHH
Q 044635 741 GLVAKRLLSTMQEREML-PDFVLCVGDDR-SDEDMFEVIISSMAGPSIAPRAEVFACTVGRK----PSKAKYYLDDTVEI 814 (831)
Q Consensus 741 G~al~~Ll~~l~~~g~~-~d~vla~GD~~-NDe~Mf~~a~~~~~~~~~~~~~~~~~v~vG~~----~s~A~y~l~d~~eV 814 (831)
-...+.+++.+ |.. +++++.|||+. +|+..=+.+|.. .+.+.-+.. ...|+|.+++..++
T Consensus 153 p~~~~~~~~~~---~~~~~~~~~~vgD~~~~Di~~A~~aG~~-----------~i~~~~~~~~~~~~~~~~~~i~~~~el 218 (224)
T PRK09449 153 VAIFDYALEQM---GNPDRSRVLMVGDNLHSDILGGINAGID-----------TCWLNAHGREQPEGIAPTYQVSSLSEL 218 (224)
T ss_pred HHHHHHHHHHc---CCCCcccEEEEcCCcHHHHHHHHHCCCc-----------EEEECCCCCCCCCCCCCeEEECCHHHH
Confidence 45677788877 764 58999999997 799988888752 122221211 12578889999998
Q ss_pred HHHHH
Q 044635 815 VRLMQ 819 (831)
Q Consensus 815 ~~~L~ 819 (831)
..+|+
T Consensus 219 ~~~l~ 223 (224)
T PRK09449 219 EQLLC 223 (224)
T ss_pred HHHHh
Confidence 88765
No 303
>TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent.
Probab=73.79 E-value=2.6 Score=44.53 Aligned_cols=15 Identities=27% Similarity=0.609 Sum_probs=13.5
Q ss_pred CceeEEecCCCccCC
Q 044635 572 TTRAILLDYDGTLMP 586 (831)
Q Consensus 572 ~~rli~~D~DGTLl~ 586 (831)
+.+.|+||+||||++
T Consensus 1 ~~k~viFD~DGTLiD 15 (253)
T TIGR01422 1 KIEAVIFDWAGTTVD 15 (253)
T ss_pred CceEEEEeCCCCeec
Confidence 367999999999999
No 304
>KOG1050 consensus Trehalose-6-phosphate synthase component TPS1 and related subunits [Carbohydrate transport and metabolism]
Probab=73.58 E-value=0.27 Score=59.53 Aligned_cols=209 Identities=16% Similarity=0.102 Sum_probs=99.7
Q ss_pred HHHHHHHHhcCceeEEecCCCccCCCCCCCCCCCHHHHHHHHHHhh---cCCCeEEEECCCCHhh----------HHHHh
Q 044635 562 EHIVSAYKRTTTRAILLDYDGTLMPQASIDKSPNSKTIDILNSLCR---DKNNMVFLVSAKSRKT----------LAEWF 628 (831)
Q Consensus 562 ~~~~~~y~~s~~rli~~D~DGTLl~~~~~~~~~s~~~~~~L~~L~~---d~g~~V~I~SGR~~~~----------l~~~~ 628 (831)
.++....-..+.-|.++|+||||-++ ...+....+..-.+++. ++...-.++|||++.. +.++.
T Consensus 178 sEi~r~lp~r~eIl~gll~~~~i~f~---t~d~arhFls~c~R~l~~~~~s~~~~~~v~~rgr~~~v~~~pigid~~r~v 254 (732)
T KOG1050|consen 178 SEIYRCLPVRKEILRGLLYDDLLGFH---TDDYARHFLSTCSRLLGLEVASKFPTAGVSGRGRDVSVKALPIGIDVQRFV 254 (732)
T ss_pred HHHHHhcccHHHHHHhhhccCccccc---cccHHHHHHHHHHHHHHhhhhccCCcceEEeccceeeeeecccccchHHhh
Confidence 33444434445668999999999984 33333333332222221 1122355689998665 55554
Q ss_pred CCCCCceEEecCCEEEEeCC-CceEEEcCCcCC-----ccHHHHHHHHHHHHhccCC--------------CeeEeeccc
Q 044635 629 SPCENLGIAAEHGYFFRLRR-DEEWETCIPVAD-----CGWKQIAEPVMKLYTETTD--------------GSTIEDKET 688 (831)
Q Consensus 629 ~~~~~~~liaenGa~i~~~~-~~~w~~~~~~~~-----~~w~~~v~~il~~~~e~~~--------------gs~ie~k~~ 688 (831)
+ +.+++.++++|-.|..+. +....-..+..+ ..+....++.++.|.+-.+ +.-+++-..
T Consensus 255 ~-~~~~~~~~~~~~ei~~~~~g~klilgvD~~d~~kg~~~Kl~a~e~~L~~~pe~~~kVvliqi~~~~~~~~~~v~~~k~ 333 (732)
T KOG1050|consen 255 K-LLELPYVGSKGMEIKEPFKGKKLILGVDRLDSIKGIQLKLLAFEQFLEEYPEWIDKVVLIQIENPKRTDGKEVEELKF 333 (732)
T ss_pred c-cccchhHHHHHHHHhhhccCCceEecccccccccCchHHHHHHHHHHHhChhhhceEEEEEEecCCcccchHHHHHHH
Confidence 3 346778888988887654 222221222211 1233344555555543211 111111112
Q ss_pred eEEEeeccCCCccchHHHHHHHHHHHhHhcCC-CeEEEEcCeEEEEEeC-CCCHHHHHHHHHHHhhhcC--CCcccEEEE
Q 044635 689 ALVWSYEDADPDFGSCQAKELLDHLESVLANE-PVTVKSGQNLVEVKPQ-GVNKGLVAKRLLSTMQERE--MLPDFVLCV 764 (831)
Q Consensus 689 ~l~~~~~~~d~~~~~~~a~el~~~L~~~l~~~-~v~v~~g~~~vEV~p~-gvnKG~al~~Ll~~l~~~g--~~~d~vla~ 764 (831)
.+..||+..+..|+...+..+. .+.... ......+....|+.|. .+.||.++..+.......+ -..=....+
T Consensus 334 ~v~~~v~rIn~~f~~~~~~pV~----~~~~~~~~~~l~a~~~Vaev~~v~s~rdGmnl~~~e~i~~~~~~~~~lVlsef~ 409 (732)
T KOG1050|consen 334 CVSVHVRRINEKFGSASYQPVH----SLLKDLPFLELLALYKVAEVCPVTSWRDGMNLVFLEYILCQENKKSVLVLSEFI 409 (732)
T ss_pred HhHhhhhhhhhccCCcccceEE----EeeccCCHHHHhhhHHhhhheeecccccccchhhhHHHHhhcccCCceEEeeec
Confidence 2222222222222211100000 000000 0011223445677764 7889998888777654333 122245678
Q ss_pred cCCchhHHHHHHcc
Q 044635 765 GDDRSDEDMFEVII 778 (831)
Q Consensus 765 GD~~NDe~Mf~~a~ 778 (831)
||+..|++-+..++
T Consensus 410 G~~~tl~d~aivvn 423 (732)
T KOG1050|consen 410 GDDTTLEDAAIVVN 423 (732)
T ss_pred cccccccccCEEEC
Confidence 99999977666554
No 305
>COG4359 Uncharacterized conserved protein [Function unknown]
Probab=72.88 E-value=5.5 Score=39.69 Aligned_cols=41 Identities=22% Similarity=0.193 Sum_probs=30.4
Q ss_pred eCCCCHHHHHHHHHHHhhhcCCCcccEEEEcCCchhHHHHHHcchhcC
Q 044635 735 PQGVNKGLVAKRLLSTMQEREMLPDFVLCVGDDRSDEDMFEVIISSMA 782 (831)
Q Consensus 735 p~gvnKG~al~~Ll~~l~~~g~~~d~vla~GD~~NDe~Mf~~a~~~~~ 782 (831)
+-|..|+..+..+.+. ++-++.+|||.+|++.-+.....+|
T Consensus 143 ~fG~dK~~vI~~l~e~-------~e~~fy~GDsvsDlsaaklsDllFA 183 (220)
T COG4359 143 QFGHDKSSVIHELSEP-------NESIFYCGDSVSDLSAAKLSDLLFA 183 (220)
T ss_pred ccCCCcchhHHHhhcC-------CceEEEecCCcccccHhhhhhhHhh
Confidence 4578899888888653 4568999999999887766655443
No 306
>PHA02597 30.2 hypothetical protein; Provisional
Probab=72.03 E-value=1.8 Score=43.84 Aligned_cols=60 Identities=15% Similarity=0.022 Sum_probs=42.8
Q ss_pred HHHHHHHHHHHhhhcCCCcccEEEEcCCchhHHHHHHc--chhcCCCCCCCCCceEEEEeCCCC--cccceEeCChhHHH
Q 044635 740 KGLVAKRLLSTMQEREMLPDFVLCVGDDRSDEDMFEVI--ISSMAGPSIAPRAEVFACTVGRKP--SKAKYYLDDTVEIV 815 (831)
Q Consensus 740 KG~al~~Ll~~l~~~g~~~d~vla~GD~~NDe~Mf~~a--~~~~~~~~~~~~~~~~~v~vG~~~--s~A~y~l~d~~eV~ 815 (831)
|-..+..+++.+ | ++.+++|||+.+|+..-+.+ |-. ++.+.-|+.+ -.+.|.+++..|+.
T Consensus 132 kp~~~~~a~~~~---~--~~~~v~vgDs~~di~aA~~a~~Gi~-----------~i~~~~~~~~~~~~~~~~~~~~~~~~ 195 (197)
T PHA02597 132 KEKLFIKAKEKY---G--DRVVCFVDDLAHNLDAAHEALSQLP-----------VIHMLRGERDHIPKLAHRVKSWNDIE 195 (197)
T ss_pred cHHHHHHHHHHh---C--CCcEEEeCCCHHHHHHHHHHHcCCc-----------EEEecchhhccccchhhhhccHHHHh
Confidence 567788888887 6 78899999999998888776 642 3455556532 25557777776654
No 307
>PRK13478 phosphonoacetaldehyde hydrolase; Provisional
Probab=72.01 E-value=3 Score=44.56 Aligned_cols=15 Identities=27% Similarity=0.634 Sum_probs=13.8
Q ss_pred CceeEEecCCCccCC
Q 044635 572 TTRAILLDYDGTLMP 586 (831)
Q Consensus 572 ~~rli~~D~DGTLl~ 586 (831)
+.++|+||+||||++
T Consensus 3 ~~k~vIFDlDGTLiD 17 (267)
T PRK13478 3 KIQAVIFDWAGTTVD 17 (267)
T ss_pred ceEEEEEcCCCCeec
Confidence 468999999999999
No 308
>PRK11590 hypothetical protein; Provisional
Probab=71.88 E-value=2 Score=44.23 Aligned_cols=15 Identities=40% Similarity=0.724 Sum_probs=13.6
Q ss_pred CceeEEecCCCccCC
Q 044635 572 TTRAILLDYDGTLMP 586 (831)
Q Consensus 572 ~~rli~~D~DGTLl~ 586 (831)
++|+++||+||||+.
T Consensus 5 ~~k~~iFD~DGTL~~ 19 (211)
T PRK11590 5 ERRVVFFDLDGTLHQ 19 (211)
T ss_pred cceEEEEecCCCCcc
Confidence 578999999999995
No 309
>PRK14988 GMP/IMP nucleotidase; Provisional
Probab=71.70 E-value=2.1 Score=44.64 Aligned_cols=15 Identities=47% Similarity=0.795 Sum_probs=13.6
Q ss_pred CceeEEecCCCccCC
Q 044635 572 TTRAILLDYDGTLMP 586 (831)
Q Consensus 572 ~~rli~~D~DGTLl~ 586 (831)
+.|+|+||+||||++
T Consensus 9 ~~k~vIFDlDGTL~d 23 (224)
T PRK14988 9 DVDTVLLDMDGTLLD 23 (224)
T ss_pred cCCEEEEcCCCCccc
Confidence 368999999999998
No 310
>TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases.
Probab=71.24 E-value=2.5 Score=43.45 Aligned_cols=66 Identities=14% Similarity=0.069 Sum_probs=45.3
Q ss_pred HHHHHHHHHHHhhhcCCCcccEEEEcCCc-hhHHHHHHcchhcCCCCCCCCCceEEEEeCCC----CcccceEeCChhHH
Q 044635 740 KGLVAKRLLSTMQEREMLPDFVLCVGDDR-SDEDMFEVIISSMAGPSIAPRAEVFACTVGRK----PSKAKYYLDDTVEI 814 (831)
Q Consensus 740 KG~al~~Ll~~l~~~g~~~d~vla~GD~~-NDe~Mf~~a~~~~~~~~~~~~~~~~~v~vG~~----~s~A~y~l~d~~eV 814 (831)
+....+..++.+. |++++++++|||+. +|+..=+.+|.. .+.++.|.. ...+.|.+++..++
T Consensus 154 ~~~~~~~~~~~~~--~~~~~~~v~igD~~~~di~~A~~~G~~-----------~i~~~~~~~~~~~~~~~~~~~~~~~el 220 (224)
T TIGR02254 154 DKEIFNYALERMP--KFSKEEVLMIGDSLTADIKGGQNAGLD-----------TCWMNPDMHPNPDDIIPTYEIRSLEEL 220 (224)
T ss_pred CHHHHHHHHHHhc--CCCchheEEECCCcHHHHHHHHHCCCc-----------EEEECCCCCCCCCCCCCceEECCHHHH
Confidence 3455666666541 68899999999998 899999998852 134443422 23567788888887
Q ss_pred HHHH
Q 044635 815 VRLM 818 (831)
Q Consensus 815 ~~~L 818 (831)
..+|
T Consensus 221 ~~~~ 224 (224)
T TIGR02254 221 YEIL 224 (224)
T ss_pred HhhC
Confidence 7653
No 311
>COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only]
Probab=71.21 E-value=3.8 Score=42.56 Aligned_cols=25 Identities=12% Similarity=0.041 Sum_probs=23.7
Q ss_pred CCCcccEEEEcCCchhHHHHHHcch
Q 044635 755 EMLPDFVLCVGDDRSDEDMFEVIIS 779 (831)
Q Consensus 755 g~~~d~vla~GD~~NDe~Mf~~a~~ 779 (831)
|..|+++++|.|+.+.+..-+++|.
T Consensus 156 gv~P~~CvviEDs~~Gi~Aa~aAGm 180 (221)
T COG0637 156 GVDPEECVVVEDSPAGIQAAKAAGM 180 (221)
T ss_pred CCChHHeEEEecchhHHHHHHHCCC
Confidence 8999999999999999999999985
No 312
>PF02684 LpxB: Lipid-A-disaccharide synthetase; InterPro: IPR003835 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. These enzymes belong to the glycosyltransferase family 19 GT19 from CAZY. Lipid-A-disaccharide synthetase 2.4.1.182 from EC is involved with acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase 2.3.1.129 from EC and tetraacyldisaccharide 4'-kinase 2.7.1.130 from EC in the biosynthesis of the phosphorylated glycolipid, lipid A, in the outer membrane of Escherichia coli and other bacteria. These enzymes catalyse the first disaccharide step in the synthesis of lipid-A-disaccharide.; GO: 0008915 lipid-A-disaccharide synthase activity, 0009245 lipid A biosynthetic process
Probab=70.27 E-value=1.9e+02 Score=32.60 Aligned_cols=235 Identities=20% Similarity=0.255 Sum_probs=119.7
Q ss_pred CCCCCEEEEeCccc--cchHHHHHhhcCCCeEEEEEeccCCChHHhhcCCChHHHHHHHhcCCeEeecCHHhHHHHHHHH
Q 044635 199 NPEDDFVWVHDYHL--MVLPTFLRKRFNRVKLGFFLHSPFPSSEIYKTLPIREEILRALLNSDLIGFHTFDYARHFLSCC 276 (831)
Q Consensus 199 ~~~~d~vwvhDyhL--~llp~~lr~~~~~~~i~~flH~PfP~~e~f~~lp~r~eil~~ll~~dligf~t~~~~~~Fl~~~ 276 (831)
+| |+|..=||.= +-+...+|++++..|+.++.= |.++.==++|-..++.. +|.+--- +.+-..|..
T Consensus 82 ~p--d~vIlID~pgFNlrlak~lk~~~~~~~viyYI~-----PqvWAWr~~R~~~i~~~--~D~ll~i-fPFE~~~y~-- 149 (373)
T PF02684_consen 82 KP--DVVILIDYPGFNLRLAKKLKKRGIPIKVIYYIS-----PQVWAWRPGRAKKIKKY--VDHLLVI-FPFEPEFYK-- 149 (373)
T ss_pred CC--CEEEEeCCCCccHHHHHHHHHhCCCceEEEEEC-----CceeeeCccHHHHHHHH--HhheeEC-CcccHHHHh--
Confidence 55 6777767763 345678999998877866543 44554335665555553 3443211 111112221
Q ss_pred HHHhCCeecccCceeeEEEcCEEEEEEEeecccChHHHHHhhCCcchHHHHHHHHHHhccCCcE-E-EEeccCccccc-C
Q 044635 277 SRMLGLTYESKRGYIGLEYYGRTVSIKILPVGIHMGQLQSVLSLPGTEAKVSELIKQFHDQGKV-M-LLGVDDMDIFK-G 353 (831)
Q Consensus 277 ~r~l~~~~~~~~~~~~~~~~gr~~~i~v~P~GId~~~~~~~~~~~~~~~~~~~lr~~~~~~~~~-i-il~VdRld~~K-G 353 (831)
+.| +-..|-|+.. +|. ....+. ....++.+-+.+++ | ++-=+|-...| .
T Consensus 150 ----------~~g-~~~~~VGHPl--------~d~-----~~~~~~----~~~~~~~~l~~~~~iIaLLPGSR~~EI~rl 201 (373)
T PF02684_consen 150 ----------KHG-VPVTYVGHPL--------LDE-----VKPEPD----RAEAREKLLDPDKPIIALLPGSRKSEIKRL 201 (373)
T ss_pred ----------ccC-CCeEEECCcc--------hhh-----hccCCC----HHHHHHhcCCCCCcEEEEeCCCCHHHHHHH
Confidence 111 1234555532 111 111111 11222222112333 3 33345665444 4
Q ss_pred HHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhccCCCCCCccEEEecCCCCHHHHHHHH
Q 044635 354 ISLKLLAMEQLLIQHPEWQGKVVLVQIANPARGRGKDVKEVQAETYSTVERINQTFGKPGYDPVVLIDEPLKFYERIAYY 433 (831)
Q Consensus 354 i~~~l~A~~~lL~~~P~~~~~vvLvqig~p~r~~~~~~~~l~~~i~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~aly 433 (831)
++..++|.+++.+++|+++ ++....++ ...+.+.+.....+. +. +++.. ..+...++
T Consensus 202 lP~~l~aa~~l~~~~p~l~----fvvp~a~~--------~~~~~i~~~~~~~~~-----~~-~~~~~-----~~~~~~~m 258 (373)
T PF02684_consen 202 LPIFLEAAKLLKKQRPDLQ----FVVPVAPE--------VHEELIEEILAEYPP-----DV-SIVII-----EGESYDAM 258 (373)
T ss_pred HHHHHHHHHHHHHhCCCeE----EEEecCCH--------HHHHHHHHHHHhhCC-----CC-eEEEc-----CCchHHHH
Confidence 5888999999999999876 66544332 112223333322211 11 23332 23677889
Q ss_pred HHcCEeEECCCccCCCCCCCCCceEE-----------------EecccccccccCCC-----ceeCCCCHHHHHHHHHHH
Q 044635 434 VVAECCLVTAVRDGSEPSSPKKSMLV-----------------VSEFIGCSPSLSGA-----IRVNPWNIDAVSDAMDSA 491 (831)
Q Consensus 434 ~~ADv~vvtS~~eGma~~~~~~g~lV-----------------lSe~~G~~~~l~~a-----llVnP~d~~~~A~ai~~a 491 (831)
+.||+.+++|=.=.+-+ +-.+.|.| -..+.|..-.+-+- ++-+--+++.+++++...
T Consensus 259 ~~ad~al~~SGTaTLE~-Al~g~P~Vv~Yk~~~lt~~iak~lvk~~~isL~Niia~~~v~PEliQ~~~~~~~i~~~~~~l 337 (373)
T PF02684_consen 259 AAADAALAASGTATLEA-ALLGVPMVVAYKVSPLTYFIAKRLVKVKYISLPNIIAGREVVPELIQEDATPENIAAELLEL 337 (373)
T ss_pred HhCcchhhcCCHHHHHH-HHhCCCEEEEEcCcHHHHHHHHHhhcCCEeechhhhcCCCcchhhhcccCCHHHHHHHHHHH
Confidence 99999999985433300 00012222 23555555444222 333456789999999999
Q ss_pred hcCCHH
Q 044635 492 LEMADQ 497 (831)
Q Consensus 492 L~m~~~ 497 (831)
|..++.
T Consensus 338 l~~~~~ 343 (373)
T PF02684_consen 338 LENPEK 343 (373)
T ss_pred hcCHHH
Confidence 975543
No 313
>PHA02597 30.2 hypothetical protein; Provisional
Probab=70.23 E-value=6.8 Score=39.53 Aligned_cols=22 Identities=32% Similarity=0.377 Sum_probs=16.6
Q ss_pred ccEEEEcCCchhHHHHHHcchh
Q 044635 759 DFVLCVGDDRSDEDMFEVIISS 780 (831)
Q Consensus 759 d~vla~GD~~NDe~Mf~~a~~~ 780 (831)
+.+++.++...+-++|..+-..
T Consensus 121 ~~i~~~~~~~~kp~~~~~a~~~ 142 (197)
T PHA02597 121 SEVLMCGHDESKEKLFIKAKEK 142 (197)
T ss_pred cEEEEeccCcccHHHHHHHHHH
Confidence 5677888887788888876554
No 314
>TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509).
Probab=69.98 E-value=3.6 Score=41.06 Aligned_cols=37 Identities=8% Similarity=0.052 Sum_probs=30.8
Q ss_pred HHHHHHHHHHHhhhcCCCcccEEEEcCCchhHHHHHHcch
Q 044635 740 KGLVAKRLLSTMQEREMLPDFVLCVGDDRSDEDMFEVIIS 779 (831)
Q Consensus 740 KG~al~~Ll~~l~~~g~~~d~vla~GD~~NDe~Mf~~a~~ 779 (831)
+-...+.+++.+ |.+++++++|||+..|+..=+.+|.
T Consensus 143 ~p~~~~~~~~~~---~~~~~~~l~vgD~~~di~aA~~~G~ 179 (184)
T TIGR01993 143 SPQAYEKALREA---GVDPERAIFFDDSARNIAAAKALGM 179 (184)
T ss_pred CHHHHHHHHHHh---CCCccceEEEeCCHHHHHHHHHcCC
Confidence 345777888887 8999999999999999888877763
No 315
>KOG1615 consensus Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=69.36 E-value=0.87 Score=45.55 Aligned_cols=36 Identities=19% Similarity=0.146 Sum_probs=30.0
Q ss_pred CHHHHHHHHHHHhhhcCCCcccEEEEcCCchhHHHHHHcch
Q 044635 739 NKGLVAKRLLSTMQEREMLPDFVLCVGDDRSDEDMFEVIIS 779 (831)
Q Consensus 739 nKG~al~~Ll~~l~~~g~~~d~vla~GD~~NDe~Mf~~a~~ 779 (831)
.|+.++..+.+ +.+...++++||+.||++|..-+..
T Consensus 159 gKa~~i~~lrk-----~~~~~~~~mvGDGatDlea~~pa~a 194 (227)
T KOG1615|consen 159 GKAEVIALLRK-----NYNYKTIVMVGDGATDLEAMPPADA 194 (227)
T ss_pred ccHHHHHHHHh-----CCChheeEEecCCccccccCCchhh
Confidence 79999998877 5677889999999999998776443
No 316
>TIGR01990 bPGM beta-phosphoglucomutase. The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state.
Probab=69.06 E-value=5.5 Score=39.52 Aligned_cols=37 Identities=5% Similarity=0.018 Sum_probs=32.1
Q ss_pred HHHHHHHHHHHhhhcCCCcccEEEEcCCchhHHHHHHcch
Q 044635 740 KGLVAKRLLSTMQEREMLPDFVLCVGDDRSDEDMFEVIIS 779 (831)
Q Consensus 740 KG~al~~Ll~~l~~~g~~~d~vla~GD~~NDe~Mf~~a~~ 779 (831)
+-...++.++++ +++++.+++|||+.+|+.+-+.+|.
T Consensus 143 ~p~~~~~~~~~~---~~~~~~~v~vgD~~~di~aA~~aG~ 179 (185)
T TIGR01990 143 DPEIFLAAAEGL---GVSPSECIGIEDAQAGIEAIKAAGM 179 (185)
T ss_pred ChHHHHHHHHHc---CCCHHHeEEEecCHHHHHHHHHcCC
Confidence 566777888887 8999999999999999999988874
No 317
>PRK13226 phosphoglycolate phosphatase; Provisional
Probab=68.99 E-value=2.1 Score=44.63 Aligned_cols=29 Identities=31% Similarity=0.576 Sum_probs=20.3
Q ss_pred ceeEEecCCCccCCCCCCCCCCCHHHHHHHHHHhhc
Q 044635 573 TRAILLDYDGTLMPQASIDKSPNSKTIDILNSLCRD 608 (831)
Q Consensus 573 ~rli~~D~DGTLl~~~~~~~~~s~~~~~~L~~L~~d 608 (831)
.+.++||+||||++. . +...++++.+.++
T Consensus 12 ~k~viFD~DGTL~Ds---~----~~~~~a~~~~~~~ 40 (229)
T PRK13226 12 PRAVLFDLDGTLLDS---A----PDMLATVNAMLAA 40 (229)
T ss_pred CCEEEEcCcCccccC---H----HHHHHHHHHHHHH
Confidence 479999999999992 2 3455555555553
No 318
>cd03784 GT1_Gtf_like This family includes the Gtfs, a group of homologous glycosyltransferases involved in the final stages of the biosynthesis of antibiotics vancomycin and related chloroeremomycin. Gtfs transfer sugar moieties from an activated NDP-sugar donor to the oxidatively cross-linked heptapeptide core of vancomycin group antibiotics. The core structure is important for the bioactivity of the antibiotics.
Probab=68.62 E-value=2e+02 Score=32.19 Aligned_cols=69 Identities=10% Similarity=0.153 Sum_probs=40.8
Q ss_pred EecCCCCHHHHHHHHHHcCEeEECCCccCCCC--CC-CCCceEEEeccccc----cccc---CCCceeCCC--CHHHHHH
Q 044635 419 LIDEPLKFYERIAYYVVAECCLVTAVRDGSEP--SS-PKKSMLVVSEFIGC----SPSL---SGAIRVNPW--NIDAVSD 486 (831)
Q Consensus 419 ~~~~~v~~~el~aly~~ADv~vvtS~~eGma~--~~-~~~g~lVlSe~~G~----~~~l---~~allVnP~--d~~~~A~ 486 (831)
.+.+.+++.+ +|..||++|. +-|++. ++ ..+.|+|+.-+.+- +..+ .-|+.+++. +.+++++
T Consensus 291 ~~~~~~p~~~---ll~~~d~~I~---hgG~~t~~eal~~GvP~v~~P~~~dQ~~~a~~~~~~G~g~~l~~~~~~~~~l~~ 364 (401)
T cd03784 291 RVVDFVPHDW---LLPRCAAVVH---HGGAGTTAAALRAGVPQLVVPFFGDQPFWAARVAELGAGPALDPRELTAERLAA 364 (401)
T ss_pred EEeCCCCHHH---Hhhhhheeee---cCCchhHHHHHHcCCCEEeeCCCCCcHHHHHHHHHCCCCCCCCcccCCHHHHHH
Confidence 4455677654 5778999984 344411 00 11445666555442 1112 335666554 6899999
Q ss_pred HHHHHhc
Q 044635 487 AMDSALE 493 (831)
Q Consensus 487 ai~~aL~ 493 (831)
++.++|+
T Consensus 365 al~~~l~ 371 (401)
T cd03784 365 ALRRLLD 371 (401)
T ss_pred HHHHHhC
Confidence 9999997
No 319
>TIGR01990 bPGM beta-phosphoglucomutase. The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state.
Probab=68.50 E-value=4.2 Score=40.35 Aligned_cols=27 Identities=19% Similarity=0.346 Sum_probs=19.4
Q ss_pred eEEecCCCccCCCCCCCCCCCHHHHHHHHHHhhc
Q 044635 575 AILLDYDGTLMPQASIDKSPNSKTIDILNSLCRD 608 (831)
Q Consensus 575 li~~D~DGTLl~~~~~~~~~s~~~~~~L~~L~~d 608 (831)
+|+||+||||++. .+....+++++++.
T Consensus 1 ~iiFD~DGTL~ds-------~~~~~~~~~~~~~~ 27 (185)
T TIGR01990 1 AVIFDLDGVITDT-------AEYHYLAWKALADE 27 (185)
T ss_pred CeEEcCCCccccC-------hHHHHHHHHHHHHH
Confidence 4899999999983 24555666666653
No 320
>TIGR01426 MGT glycosyltransferase, MGT family. This model describes the MGT (macroside glycosyltransferase) subfamily of the UDP-glucuronosyltransferase family. Members include a number of glucosyl transferases for macrolide antibiotic inactivation, but also include transferases of glucose-related sugars for macrolide antibiotic production.
Probab=68.06 E-value=46 Score=37.46 Aligned_cols=93 Identities=10% Similarity=-0.023 Sum_probs=51.9
Q ss_pred EecCCCCHHHHHHHHHHcCEeEECCCc----cCCCCCCCCCceEEEecccccccc----c---CCCceeCC--CCHHHHH
Q 044635 419 LIDEPLKFYERIAYYVVAECCLVTAVR----DGSEPSSPKKSMLVVSEFIGCSPS----L---SGAIRVNP--WNIDAVS 485 (831)
Q Consensus 419 ~~~~~v~~~el~aly~~ADv~vvtS~~----eGma~~~~~~g~lVlSe~~G~~~~----l---~~allVnP--~d~~~~A 485 (831)
.+.+.+++. .++..||++|..+=. |.+++ +.|+|+.-..+-... + ..|+.++. .+.++++
T Consensus 278 ~~~~~~p~~---~ll~~~~~~I~hgG~~t~~Eal~~----G~P~v~~p~~~dq~~~a~~l~~~g~g~~l~~~~~~~~~l~ 350 (392)
T TIGR01426 278 EVRQWVPQL---EILKKADAFITHGGMNSTMEALFN----GVPMVAVPQGADQPMTARRIAELGLGRHLPPEEVTAEKLR 350 (392)
T ss_pred EEeCCCCHH---HHHhhCCEEEECCCchHHHHHHHh----CCCEEecCCcccHHHHHHHHHHCCCEEEeccccCCHHHHH
Confidence 345677764 567899998875522 22222 446666544332211 1 23555553 4678999
Q ss_pred HHHHHHhcCCHHHHHHHHHHHhhhhccC-CHHHHHH
Q 044635 486 DAMDSALEMADQEKQLRHEKHYRYVSTH-DVGYWAR 520 (831)
Q Consensus 486 ~ai~~aL~m~~~er~~r~~~~~~~v~~~-~~~~W~~ 520 (831)
++|.++|..+ +.+++.+++.+.+... .....++
T Consensus 351 ~ai~~~l~~~--~~~~~~~~l~~~~~~~~~~~~aa~ 384 (392)
T TIGR01426 351 EAVLAVLSDP--RYAERLRKMRAEIREAGGARRAAD 384 (392)
T ss_pred HHHHHHhcCH--HHHHHHHHHHHHHHHcCCHHHHHH
Confidence 9999999754 3444445555554443 3444443
No 321
>COG0707 MurG UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase [Cell envelope biogenesis, outer membrane]
Probab=67.00 E-value=1.4e+02 Score=33.53 Aligned_cols=82 Identities=11% Similarity=0.086 Sum_probs=50.2
Q ss_pred HHHHHHHHHcCEeEECC----CccCCCCCCCCCceEEEecccccc--cc------c---CCCceeCCCC--HHHHHHHHH
Q 044635 427 YERIAYYVVAECCLVTA----VRDGSEPSSPKKSMLVVSEFIGCS--PS------L---SGAIRVNPWN--IDAVSDAMD 489 (831)
Q Consensus 427 ~el~aly~~ADv~vvtS----~~eGma~~~~~~g~lVlSe~~G~~--~~------l---~~allVnP~d--~~~~A~ai~ 489 (831)
+++.++|++||+++.=| +.|-.++ +-|.|+=-+...+ .+ + ..|+.+.-.+ ++.+++.|.
T Consensus 244 ~dm~~~~~~ADLvIsRaGa~Ti~E~~a~----g~P~IliP~p~~~~~~Q~~NA~~l~~~gaa~~i~~~~lt~~~l~~~i~ 319 (357)
T COG0707 244 DDMAALLAAADLVISRAGALTIAELLAL----GVPAILVPYPPGADGHQEYNAKFLEKAGAALVIRQSELTPEKLAELIL 319 (357)
T ss_pred hhHHHHHHhccEEEeCCcccHHHHHHHh----CCCEEEeCCCCCccchHHHHHHHHHhCCCEEEeccccCCHHHHHHHHH
Confidence 46999999999998733 1222233 3455555444442 22 2 3466665555 889999999
Q ss_pred HHhcCCHHHHHHHHHHHhhhhccCC
Q 044635 490 SALEMADQEKQLRHEKHYRYVSTHD 514 (831)
Q Consensus 490 ~aL~m~~~er~~r~~~~~~~v~~~~ 514 (831)
++++. .|+..+|....+.+..-+
T Consensus 320 ~l~~~--~~~l~~m~~~a~~~~~p~ 342 (357)
T COG0707 320 RLLSN--PEKLKAMAENAKKLGKPD 342 (357)
T ss_pred HHhcC--HHHHHHHHHHHHhcCCCC
Confidence 99974 355555555555554444
No 322
>KOG2884 consensus 26S proteasome regulatory complex, subunit RPN10/PSMD4 [Posttranslational modification, protein turnover, chaperones]
Probab=66.64 E-value=72 Score=32.74 Aligned_cols=47 Identities=21% Similarity=0.269 Sum_probs=26.5
Q ss_pred ceEEEecccccccccC-----CCceeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHH
Q 044635 456 SMLVVSEFIGCSPSLS-----GAIRVNPWNIDAVSDAMDSALEMADQEKQLRHEKH 506 (831)
Q Consensus 456 g~lVlSe~~G~~~~l~-----~allVnP~d~~~~A~ai~~aL~m~~~er~~r~~~~ 506 (831)
.|++..|-.|++--+. -.+=|+|.+--++|.||+-.+ +|.+.|.++.
T Consensus 186 sPii~ge~g~a~~~~~a~g~~f~fgvdp~~DPELAlALRlSM----EEer~rQe~a 237 (259)
T KOG2884|consen 186 SPIIQGEDGGAAAGLGANGMDFEFGVDPEDDPELALALRLSM----EEERARQERA 237 (259)
T ss_pred CceeccCcccccccccccccccccCCCcccCHHHHHHHHhhH----HHHHHHHHHH
Confidence 3455555444433331 235678887778998887443 3555555543
No 323
>TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases.
Probab=65.63 E-value=14 Score=37.82 Aligned_cols=14 Identities=29% Similarity=0.646 Sum_probs=12.9
Q ss_pred ceeEEecCCCccCC
Q 044635 573 TRAILLDYDGTLMP 586 (831)
Q Consensus 573 ~rli~~D~DGTLl~ 586 (831)
+|+++||+||||++
T Consensus 1 ~k~viFD~DGTL~d 14 (224)
T TIGR02254 1 YKTLLFDLDDTILD 14 (224)
T ss_pred CCEEEEcCcCcccc
Confidence 47899999999998
No 324
>KOG2116 consensus Protein involved in plasmid maintenance/nuclear protein involved in lipid metabolism [Cell motility; Lipid transport and metabolism]
Probab=65.59 E-value=6.3 Score=46.34 Aligned_cols=77 Identities=13% Similarity=0.226 Sum_probs=52.4
Q ss_pred cCceeEEecCCCccCCCCCC-------CCC-CCHHHHHHHHHHhhcCCCeEEEECCCCHh---hHHHHhCCCCCceEEec
Q 044635 571 TTTRAILLDYDGTLMPQASI-------DKS-PNSKTIDILNSLCRDKNNMVFLVSAKSRK---TLAEWFSPCENLGIAAE 639 (831)
Q Consensus 571 s~~rli~~D~DGTLl~~~~~-------~~~-~s~~~~~~L~~L~~d~g~~V~I~SGR~~~---~l~~~~~~~~~~~liae 639 (831)
-.-|+|++|+|||++-..-- .+. -...+.++..++.+ +|.+++.+|.|... ..+.++..+...|.+.-
T Consensus 528 Wn~kIVISDIDGTITKSDvLGh~lp~iGkDWTh~GVAkLyt~Ik~-NGYk~lyLSARaIgQA~~TR~yL~nv~QdG~~LP 606 (738)
T KOG2116|consen 528 WNDKIVISDIDGTITKSDVLGHVLPMIGKDWTHTGVAKLYTKIKE-NGYKILYLSARAIGQADSTRQYLKNVEQDGKKLP 606 (738)
T ss_pred cCCcEEEecCCCceEhhhhhhhhhhhhcCcchhhhHHHHHHHHHh-CCeeEEEEehhhhhhhHHHHHHHHHHhhcCccCC
Confidence 35689999999999972210 111 13567777777766 59999999999975 34566666555566666
Q ss_pred CCEEEEeCC
Q 044635 640 HGYFFRLRR 648 (831)
Q Consensus 640 nGa~i~~~~ 648 (831)
.|-.+..++
T Consensus 607 dGPViLSPd 615 (738)
T KOG2116|consen 607 DGPVILSPD 615 (738)
T ss_pred CCCEEeCCC
Confidence 666666553
No 325
>TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E. HAD subfamilies caused by an overly broad single model.
Probab=65.41 E-value=4.6 Score=38.87 Aligned_cols=35 Identities=23% Similarity=0.184 Sum_probs=29.7
Q ss_pred HHHHHHHHHHHhhhcCCCcccEEEEcCCchhHHHHHHcc
Q 044635 740 KGLVAKRLLSTMQEREMLPDFVLCVGDDRSDEDMFEVII 778 (831)
Q Consensus 740 KG~al~~Ll~~l~~~g~~~d~vla~GD~~NDe~Mf~~a~ 778 (831)
+.....++++++ |+++ .++.|||+.+|+.+=+.+|
T Consensus 120 ~~~~~~~~~~~~---~~~~-~~l~iGDs~~Di~aa~~aG 154 (154)
T TIGR01549 120 EPEIFLAALESL---GLPP-EVLHVGDNLNDIEGARNAG 154 (154)
T ss_pred CHHHHHHHHHHc---CCCC-CEEEEeCCHHHHHHHHHcc
Confidence 568888888888 8888 9999999999988876653
No 326
>PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 []. It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity
Probab=64.53 E-value=12 Score=39.36 Aligned_cols=36 Identities=8% Similarity=0.171 Sum_probs=23.1
Q ss_pred CHHHHHHHHHHhh-cCCCeEEEECCCCHhhHHHHhCC
Q 044635 595 NSKTIDILNSLCR-DKNNMVFLVSAKSRKTLAEWFSP 630 (831)
Q Consensus 595 s~~~~~~L~~L~~-d~g~~V~I~SGR~~~~l~~~~~~ 630 (831)
.+.+.++++.+.+ ..+..++|+|--.-..++.|++.
T Consensus 73 ~pgm~~~l~~l~~~~~~~~~~IiSDaNs~fI~~iL~~ 109 (234)
T PF06888_consen 73 DPGMKELLRFLAKNQRGFDLIIISDANSFFIETILEH 109 (234)
T ss_pred CccHHHHHHHHHhcCCCceEEEEeCCcHhHHHHHHHh
Confidence 4555666666632 24677777777777777777754
No 327
>TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II. Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related.
Probab=64.18 E-value=5.4 Score=40.27 Aligned_cols=37 Identities=22% Similarity=0.080 Sum_probs=31.9
Q ss_pred HHHHHHHHHHHhhhcCCCcccEEEEcCCchhHHHHHHcch
Q 044635 740 KGLVAKRLLSTMQEREMLPDFVLCVGDDRSDEDMFEVIIS 779 (831)
Q Consensus 740 KG~al~~Ll~~l~~~g~~~d~vla~GD~~NDe~Mf~~a~~ 779 (831)
+..+.+.+++.+ |+++++++.|||+.+|+..-+.+|.
T Consensus 150 ~~~~~~~~~~~~---~~~p~~~~~vgD~~~Di~~A~~~G~ 186 (198)
T TIGR01428 150 APQVYQLALEAL---GVPPDEVLFVASNPWDLGGAKKFGF 186 (198)
T ss_pred CHHHHHHHHHHh---CCChhhEEEEeCCHHHHHHHHHCCC
Confidence 356678888888 8999999999999999999888874
No 328
>PRK14986 glycogen phosphorylase; Provisional
Probab=63.99 E-value=1e+02 Score=38.24 Aligned_cols=130 Identities=11% Similarity=0.047 Sum_probs=86.2
Q ss_pred CCcEEEEeccCcccccCHHH-HHHHHHHH--HHhCCCCC-CcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhccCCCC
Q 044635 337 QGKVMLLGVDDMDIFKGISL-KLLAMEQL--LIQHPEWQ-GKVVLVQIANPARGRGKDVKEVQAETYSTVERINQTFGKP 412 (831)
Q Consensus 337 ~~~~iil~VdRld~~KGi~~-~l~A~~~l--L~~~P~~~-~~vvLvqig~p~r~~~~~~~~l~~~i~~lv~~IN~~~g~~ 412 (831)
++...++.+=|+..-|=..+ .|..++++ +.++|+.. ..+++|..|-..-++. .-.++-+.|.+++.-||..=...
T Consensus 541 p~sLfd~qakR~heYKRq~LNil~~i~ry~~i~~~p~~~~~P~~~IFaGKAaP~y~-~aK~iIk~I~~va~~in~Dp~v~ 619 (815)
T PRK14986 541 PKALFDVQIKRIHEYKRQLMNVLHVITRYNRIKADPDAKWVPRVNIFAGKAASAYY-MAKHIIHLINDVAKVINNDPQIG 619 (815)
T ss_pred cccceeeeehhhhhhhhhhHHHhhhHHHHHHHHhCCCcCCCCeEEEEeecCCCCcH-HHHHHHHHHHHHHHHhccChhhc
Confidence 45677888999998888777 77776666 34566532 3467776665443332 22456778888888888542223
Q ss_pred CCccEEEecCCCCHHHHHHHHHHcCEeEECCCc--c-----CCCCCCCCCceEEEeccccccccc
Q 044635 413 GYDPVVLIDEPLKFYERIAYYVVAECCLVTAVR--D-----GSEPSSPKKSMLVVSEFIGCSPSL 470 (831)
Q Consensus 413 ~~~pv~~~~~~v~~~el~aly~~ADv~vvtS~~--e-----Gma~~~~~~g~lVlSe~~G~~~~l 470 (831)
+.-.|+|+. ...-.--..++.+|||..-+|++ | || -..-.|.|-+|..-|+-.++
T Consensus 620 ~~lkVVFle-nY~vslAe~lipg~Dv~eqis~ag~EASGTsnM--K~alNGaLtlgtlDG~nvEi 681 (815)
T PRK14986 620 DKLKVVFIP-NYSVSLAQLIIPAADLSEQISLAGTEASGTSNM--KFALNGALTIGTLDGANVEM 681 (815)
T ss_pred CceeEEEeC-CCCHHHHHHhhhhhhhhhhCCCCCccccCcchh--hHHhcCceeeeccCCchhHH
Confidence 333588776 45555666789999999998874 2 33 11225788888888876665
No 329
>PRK09449 dUMP phosphatase; Provisional
Probab=63.54 E-value=3.7 Score=42.38 Aligned_cols=15 Identities=40% Similarity=0.395 Sum_probs=13.5
Q ss_pred CceeEEecCCCccCC
Q 044635 572 TTRAILLDYDGTLMP 586 (831)
Q Consensus 572 ~~rli~~D~DGTLl~ 586 (831)
+.|.|+||+||||++
T Consensus 2 ~~k~iiFDlDGTLid 16 (224)
T PRK09449 2 KYDWILFDADETLFH 16 (224)
T ss_pred CccEEEEcCCCchhc
Confidence 468999999999997
No 330
>COG1011 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=62.84 E-value=20 Score=36.73 Aligned_cols=63 Identities=17% Similarity=0.203 Sum_probs=44.9
Q ss_pred HHHHHHHHHhhhcCCCcccEEEEcCCc-hhHHHHHHcchhcCCCCCCCCCceEEEEeCCCC-------cccceEeCChhH
Q 044635 742 LVAKRLLSTMQEREMLPDFVLCVGDDR-SDEDMFEVIISSMAGPSIAPRAEVFACTVGRKP-------SKAKYYLDDTVE 813 (831)
Q Consensus 742 ~al~~Ll~~l~~~g~~~d~vla~GD~~-NDe~Mf~~a~~~~~~~~~~~~~~~~~v~vG~~~-------s~A~y~l~d~~e 813 (831)
..-+.+++.+ |++|++++.|||+. ||+.--+.+|. -||.+.... ....+.+.+..+
T Consensus 158 ~~f~~~~~~~---g~~p~~~l~VgD~~~~di~gA~~~G~-------------~~vwi~~~~~~~~~~~~~~~~~i~~l~~ 221 (229)
T COG1011 158 EIFEYALEKL---GVPPEEALFVGDSLENDILGARALGM-------------KTVWINRGGKPLPDALEAPDYEISSLAE 221 (229)
T ss_pred HHHHHHHHHc---CCCcceEEEECCChhhhhHHHHhcCc-------------EEEEECCCCCCCCCCccCCceEEcCHHH
Confidence 3446677777 89999999999985 77787788775 355554332 356667778888
Q ss_pred HHHHHHH
Q 044635 814 IVRLMQG 820 (831)
Q Consensus 814 V~~~L~~ 820 (831)
+..++..
T Consensus 222 l~~~~~~ 228 (229)
T COG1011 222 LLDLLER 228 (229)
T ss_pred HHHHHhh
Confidence 8777754
No 331
>PF06258 Mito_fiss_Elm1: Mitochondrial fission ELM1; InterPro: IPR009367 This family consists of several hypothetical eukaryotic and prokaryotic proteins. The function of this family is unknown.
Probab=62.57 E-value=86 Score=34.45 Aligned_cols=102 Identities=11% Similarity=0.008 Sum_probs=55.0
Q ss_pred HHHHHHHhc-cCCcEEEEeccC--cccccCHH---HHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHH
Q 044635 327 VSELIKQFH-DQGKVMLLGVDD--MDIFKGIS---LKLLAMEQLLIQHPEWQGKVVLVQIANPARGRGKDVKEVQAETYS 400 (831)
Q Consensus 327 ~~~lr~~~~-~~~~~iil~VdR--ld~~KGi~---~~l~A~~~lL~~~P~~~~~vvLvqig~p~r~~~~~~~~l~~~i~~ 400 (831)
..++..++. .+...+.+-||- =.+.=+-. .++..+..+.+.++ .. ++ |...-|+. + +..+.+.+
T Consensus 134 ~~~~~~~~~~l~~p~~avLIGG~s~~~~~~~~~~~~l~~~l~~~~~~~~-~~----~~-vttSRRTp-~---~~~~~L~~ 203 (311)
T PF06258_consen 134 AAAWAPRLAALPRPRVAVLIGGDSKHYRWDEEDAERLLDQLAALAAAYG-GS----LL-VTTSRRTP-P---EAEAALRE 203 (311)
T ss_pred HHhhhhhhccCCCCeEEEEECcCCCCcccCHHHHHHHHHHHHHHHHhCC-Ce----EE-EEcCCCCc-H---HHHHHHHH
Confidence 344555554 334555555553 22222233 67778888888776 22 33 33232333 2 22333333
Q ss_pred HHHHHhccCCCCCCccEEEecCCCCHHHHHHHHHHcCEeEECCCccCC
Q 044635 401 TVERINQTFGKPGYDPVVLIDEPLKFYERIAYYVVAECCLVTAVRDGS 448 (831)
Q Consensus 401 lv~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv~vvtS~~eGm 448 (831)
+.+ ...-+.++. .-+..=+.+++..||.++||.-.-.|
T Consensus 204 ~~~---------~~~~~~~~~-~~~~nPy~~~La~ad~i~VT~DSvSM 241 (311)
T PF06258_consen 204 LLK---------DNPGVYIWD-GTGENPYLGFLAAADAIVVTEDSVSM 241 (311)
T ss_pred hhc---------CCCceEEec-CCCCCcHHHHHHhCCEEEEcCccHHH
Confidence 322 111243443 33455688999999999999977777
No 332
>TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA. In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme.
Probab=62.46 E-value=8.1 Score=36.21 Aligned_cols=37 Identities=22% Similarity=0.142 Sum_probs=32.5
Q ss_pred HHHHHHHHHHHhhhcC-CCcccEEEEcC-CchhHHHHHHcch
Q 044635 740 KGLVAKRLLSTMQERE-MLPDFVLCVGD-DRSDEDMFEVIIS 779 (831)
Q Consensus 740 KG~al~~Ll~~l~~~g-~~~d~vla~GD-~~NDe~Mf~~a~~ 779 (831)
|..+.+.+++.+ + ++++++++||| +.+|+.+-+.+|.
T Consensus 87 ~~~~~~~~~~~~---~~~~~~~~v~IGD~~~~Di~~A~~~Gi 125 (132)
T TIGR01662 87 KPGMFLEALKRF---NEIDPEESVYVGDQDLTDLQAAKRAGL 125 (132)
T ss_pred ChHHHHHHHHHc---CCCChhheEEEcCCCcccHHHHHHCCC
Confidence 677888998887 5 89999999999 7999999998874
No 333
>TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain. This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3.
Probab=62.17 E-value=8.2 Score=37.17 Aligned_cols=38 Identities=18% Similarity=0.012 Sum_probs=32.3
Q ss_pred CHHHHHHHHHHHhhhcCCCcccEEEEcCCchhHHHHHHcch
Q 044635 739 NKGLVAKRLLSTMQEREMLPDFVLCVGDDRSDEDMFEVIIS 779 (831)
Q Consensus 739 nKG~al~~Ll~~l~~~g~~~d~vla~GD~~NDe~Mf~~a~~ 779 (831)
.|....+.+++.+ |++++++++|||+..|+.+-+.+|.
T Consensus 102 P~~~~~~~~~~~~---~~~~~e~i~IGDs~~Di~~A~~~Gi 139 (147)
T TIGR01656 102 PKPGLILEALKRL---GVDASRSLVVGDRLRDLQAARNAGL 139 (147)
T ss_pred CCHHHHHHHHHHc---CCChHHEEEEcCCHHHHHHHHHCCC
Confidence 3567788888887 8999999999999999888888764
No 334
>COG4996 Predicted phosphatase [General function prediction only]
Probab=61.51 E-value=14 Score=34.76 Aligned_cols=55 Identities=20% Similarity=0.146 Sum_probs=31.6
Q ss_pred eeEEecCCCccCCCCCCC--C----C---------------CCHHHHHHHHHHhhcCCCeEEEECCCCHhhHHHHhC
Q 044635 574 RAILLDYDGTLMPQASID--K----S---------------PNSKTIDILNSLCRDKNNMVFLVSAKSRKTLAEWFS 629 (831)
Q Consensus 574 rli~~D~DGTLl~~~~~~--~----~---------------~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~ 629 (831)
++|++|.||||.++.... . . .-+.+.+.|+.+.+ .|..+..+|=.......+.+.
T Consensus 1 ~~i~~d~d~t~wdhh~iSsl~pPf~rVs~n~i~Ds~G~ev~L~~~v~~~l~warn-sG~i~~~~sWN~~~kA~~aLr 76 (164)
T COG4996 1 RAIVFDADKTLWDHHNISSLEPPFRRVSSNTIEDSKGREVHLFPDVKETLKWARN-SGYILGLASWNFEDKAIKALR 76 (164)
T ss_pred CcEEEeCCCcccccccchhcCCcceecCccceecCCCeEEEEcHHHHHHHHHHHh-CCcEEEEeecCchHHHHHHHH
Confidence 589999999999854311 0 1 12455566665544 455555555555544444443
No 335
>TIGR01493 HAD-SF-IA-v2 Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase. The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single alignment is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only o
Probab=61.45 E-value=5.7 Score=39.14 Aligned_cols=32 Identities=25% Similarity=0.200 Sum_probs=25.2
Q ss_pred HHHHHHHHHHhhhcCCCcccEEEEcCCchhHHHHH
Q 044635 741 GLVAKRLLSTMQEREMLPDFVLCVGDDRSDEDMFE 775 (831)
Q Consensus 741 G~al~~Ll~~l~~~g~~~d~vla~GD~~NDe~Mf~ 775 (831)
-...+.+++.+ |+++++++.|||+..|+..-+
T Consensus 142 p~~f~~~~~~~---~~~p~~~l~vgD~~~Di~~A~ 173 (175)
T TIGR01493 142 PVVYELVFDTV---GLPPDRVLMVAAHQWDLIGAR 173 (175)
T ss_pred HHHHHHHHHHH---CCCHHHeEeEecChhhHHHHh
Confidence 34456677777 899999999999999987543
No 336
>PF00343 Phosphorylase: Carbohydrate phosphorylase; InterPro: IPR000811 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 35 GT35 from CAZY comprises enzymes with only one known activity; glycogen and starch phosphorylase (2.4.1.1 from EC). The main role of glycogen phosphorylase (GPase) is to provide phosphorylated glucose molecules (G-1-P) []. GPase is a highly regulated allosteric enzyme. The net effect of the regulatory site allows the enzyme to operate at a variety of rates; the enzyme is not simply regulated as "on" or "off", but rather it can be thought of being set to operate at an ideal rate based on changing conditions at in the cell. The most important allosteric effector is the phosphate molecule covalently attached to Ser14. This switches GPase from the b (inactive) state to the a (active) state. Upon phosphorylation, GPase attains about 80% of its Vmax. When the enzyme is not phosphorylated, GPase activity is practically non-existent at low AMP levels. There is some apparent controversy as to the structure of GPase. All sources agree that the enzyme is multimeric, but there is apparent controversy as to the enzyme being a tetramer or a dimer. Apparently, GPase (in the a form) forms tetramers in the crystal form. The consensus seems to be that `regardless of the a or b form, GPase functions as a dimer in vivo []. The GPase monomer is best described as consisting of two domains, an N-terminal domain and a C-terminal domain []. The C-terminal domain is often referred to as the catalytic domain. It consists of a beta-sheet core surrounded by layers of helical segments []. The vitamin cofactor pyridoxal phosphate (PLP) is covalently attached to the amino acid backbone. The N-terminal domain also consists of a central beta-sheet core and is surrounded by layers of helical segments. The N-terminal domain contains different allosteric effector sites to regulate the enzyme. Bacterial phosphorylases follow the same catalytic mechanisms as their plant and animal counterparts, but differ considerably in terms of their substrate specificity and regulation. The catalytic domains are highly conserved while the regulatory sites are only poorly conserved. For maltodextrin phosphorylase from Escherichia coli the physiological role of the enzyme in the utilisation of maltidextrins is known in detail; that of all the other bacterial phosphorylases is still unclear. Roles in regulatuon of endogenous glycogen metabolism in periods of starvation, and sporulation, stress response or quick adaptation to changing environments are possible [].; GO: 0004645 phosphorylase activity, 0005975 carbohydrate metabolic process; PDB: 1YGP_B 2AW3_B 2AV6_B 1AHP_B 1QM5_A 1L5W_A 2ECP_A 2ASV_A 1L5V_B 1E4O_B ....
Probab=61.02 E-value=1.3e+02 Score=36.71 Aligned_cols=132 Identities=14% Similarity=0.099 Sum_probs=73.2
Q ss_pred CCcEEEEeccCcccccCHHHH-HHHHHHH--HHhCCCCCC-cEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhccCCCC
Q 044635 337 QGKVMLLGVDDMDIFKGISLK-LLAMEQL--LIQHPEWQG-KVVLVQIANPARGRGKDVKEVQAETYSTVERINQTFGKP 412 (831)
Q Consensus 337 ~~~~iil~VdRld~~KGi~~~-l~A~~~l--L~~~P~~~~-~vvLvqig~p~r~~~~~~~~l~~~i~~lv~~IN~~~g~~ 412 (831)
++.-.++.+-|+..-|=..+. |.-+.++ ++++|+..- .+++|..|-..-++ ..-.++-+.|.++++.||..-...
T Consensus 442 p~slfdv~~rR~heYKRq~LniL~ii~~y~rik~~p~~~~~Pv~~IFaGKAhP~d-~~gK~iIk~I~~va~~in~Dp~v~ 520 (713)
T PF00343_consen 442 PDSLFDVQARRFHEYKRQLLNILHIIDRYNRIKNNPNKKIRPVQFIFAGKAHPGD-YMGKEIIKLINNVAEVINNDPEVG 520 (713)
T ss_dssp TTSEEEEEES-SCCCCTHHHHHHHHHHHHHHHHHSTTSCCS-EEEEEE----TT--HHHHHHHHHHHHHHHHHCT-TTTC
T ss_pred cchhhhhhhhhcccccccCcccccHHHHHHHHHhcccCCCCCeEEEEeccCCCCc-HHHHHHHHHHHHHHHHHhcChhhc
Confidence 456788999999999976663 3333333 345665432 46666665432122 222456677778888888542222
Q ss_pred CCccEEEecCCCCHHHHHHHHHHcCEeEECCCccCCCCC-----CCCCceEEEeccccccccc
Q 044635 413 GYDPVVLIDEPLKFYERIAYYVVAECCLVTAVRDGSEPS-----SPKKSMLVVSEFIGCSPSL 470 (831)
Q Consensus 413 ~~~pv~~~~~~v~~~el~aly~~ADv~vvtS~~eGma~~-----~~~~g~lVlSe~~G~~~~l 470 (831)
+.-.|+|+. ..+-.--..++.+|||.+-+|++--=|+. ..-.|.|.+|..-|+-.++
T Consensus 521 ~~lkVvFle-nYdvslA~~lipg~DVwln~p~~p~EASGTSgMK~~~NGaL~lstlDG~niEi 582 (713)
T PF00343_consen 521 DRLKVVFLE-NYDVSLAEKLIPGVDVWLNIPTRPKEASGTSGMKAAMNGALNLSTLDGWNIEI 582 (713)
T ss_dssp CGEEEEEET-T-SHHHHHHHGGG-SEEEE---TTSSSS-SHHHHHHHTT-EEEEESSTCHHHH
T ss_pred cceeEEeec-CCcHHHHHHHhhhhhhhhhCCCCCccccCCCcchhhcCCCeEEecccchhHHH
Confidence 333577776 45666677889999999999986311110 0124789999988886665
No 337
>PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A ....
Probab=60.63 E-value=10 Score=36.57 Aligned_cols=37 Identities=24% Similarity=0.267 Sum_probs=33.3
Q ss_pred HHHHHHHHHHHhhhcCCCcccEEEEcCCchhHHHHHHcch
Q 044635 740 KGLVAKRLLSTMQEREMLPDFVLCVGDDRSDEDMFEVIIS 779 (831)
Q Consensus 740 KG~al~~Ll~~l~~~g~~~d~vla~GD~~NDe~Mf~~a~~ 779 (831)
+..+.+.+++.+ |++++.++.|||+..|+.+-+.+|.
T Consensus 135 ~~~~~~~~~~~~---~~~p~~~~~vgD~~~d~~~A~~~G~ 171 (176)
T PF13419_consen 135 DPDAYRRALEKL---GIPPEEILFVGDSPSDVEAAKEAGI 171 (176)
T ss_dssp SHHHHHHHHHHH---TSSGGGEEEEESSHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHc---CCCcceEEEEeCCHHHHHHHHHcCC
Confidence 457889999988 9999999999999999999999874
No 338
>KOG0204 consensus Calcium transporting ATPase [Inorganic ion transport and metabolism]
Probab=60.63 E-value=52 Score=40.41 Aligned_cols=140 Identities=19% Similarity=0.298 Sum_probs=84.2
Q ss_pred CCCHHHHHHHHHHhhcCCCeEEEECCCCHhhHHHHhCCCCCceEEecCCEEEEeCCCceEEEcCCcCCccHHHHHHHHHH
Q 044635 593 SPNSKTIDILNSLCRDKNNMVFLVSAKSRKTLAEWFSPCENLGIAAEHGYFFRLRRDEEWETCIPVADCGWKQIAEPVMK 672 (831)
Q Consensus 593 ~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~~~~~~liaenGa~i~~~~~~~w~~~~~~~~~~w~~~v~~il~ 672 (831)
..-|++.++++. |+..|++|-.+||-+....+.+..+| |+...+|-++.
T Consensus 647 PvRPgV~~AV~~-Cq~AGItVRMVTGDNI~TAkAIA~eC---GILt~~~d~~~--------------------------- 695 (1034)
T KOG0204|consen 647 PVRPGVPEAVQL-CQRAGITVRMVTGDNINTAKAIAREC---GILTPGGDFLA--------------------------- 695 (1034)
T ss_pred CCCCCcHHHHHH-HHHcCcEEEEEeCCcHHHHHHHHHHc---ccccCCCccce---------------------------
Confidence 446888999985 45579999999999999999888765 33332322111
Q ss_pred HHhccCCCeeEeeccceEEEeeccCCCccchHHHHHHHHHHHhHhcCCCeEEEEcCeEEEEEeCCCCHHHHHHHHHHHhh
Q 044635 673 LYTETTDGSTIEDKETALVWSYEDADPDFGSCQAKELLDHLESVLANEPVTVKSGQNLVEVKPQGVNKGLVAKRLLSTMQ 752 (831)
Q Consensus 673 ~~~e~~~gs~ie~k~~~l~~~~~~~d~~~~~~~a~el~~~L~~~l~~~~v~v~~g~~~vEV~p~gvnKG~al~~Ll~~l~ 752 (831)
+|-++ ||+. .. ++ +.+++++..+- -+....+|-.-++-|.+.
T Consensus 696 ----------lEG~e------Fr~~----s~---ee----~~~i~pkl~Vl---------ARSSP~DK~lLVk~L~~~-- 737 (1034)
T KOG0204|consen 696 ----------LEGKE------FREL----SQ---EE----RDKIWPKLRVL---------ARSSPNDKHLLVKGLIKQ-- 737 (1034)
T ss_pred ----------ecchh------hhhc----CH---HH----HHhhhhhheee---------ecCCCchHHHHHHHHHhc--
Confidence 11111 1111 00 11 11122221111 223345788888887643
Q ss_pred hcCCCcccEEEEcCCchhHHHHHHcchhcCCCCCCCCCceEEEEeCC-----CCcccceEe--CChhHHHHHHHH
Q 044635 753 EREMLPDFVLCVGDDRSDEDMFEVIISSMAGPSIAPRAEVFACTVGR-----KPSKAKYYL--DDTVEIVRLMQG 820 (831)
Q Consensus 753 ~~g~~~d~vla~GD~~NDe~Mf~~a~~~~~~~~~~~~~~~~~v~vG~-----~~s~A~y~l--~d~~eV~~~L~~ 820 (831)
| +=|.+-||+.||-+.++.|+- +.+||- ++..++..+ |+...+++.+.+
T Consensus 738 --g---~VVAVTGDGTNDaPALkeADV--------------GlAMGIaGTeVAKEaSDIIi~DDNFssIVk~v~W 793 (1034)
T KOG0204|consen 738 --G---EVVAVTGDGTNDAPALKEADV--------------GLAMGIAGTEVAKEASDIIILDDNFSSIVKAVKW 793 (1034)
T ss_pred --C---cEEEEecCCCCCchhhhhccc--------------chhccccchhhhhhhCCeEEEcCchHHHHHHHHh
Confidence 2 446777999999999999984 556664 366777765 456667666654
No 339
>TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E. HAD subfamilies caused by an overly broad single model.
Probab=60.20 E-value=10 Score=36.38 Aligned_cols=26 Identities=31% Similarity=0.381 Sum_probs=18.9
Q ss_pred eEEecCCCccCCCCCCCCCCCHHHHHHHHHHhh
Q 044635 575 AILLDYDGTLMPQASIDKSPNSKTIDILNSLCR 607 (831)
Q Consensus 575 li~~D~DGTLl~~~~~~~~~s~~~~~~L~~L~~ 607 (831)
+|+||+||||++. .+....++++..+
T Consensus 1 ~iifD~DGTL~d~-------~~~~~~~~~~~~~ 26 (154)
T TIGR01549 1 AILFDIDGTLVDS-------SFAIRRAFEETLE 26 (154)
T ss_pred CeEecCCCccccc-------HHHHHHHHHHHHH
Confidence 4899999999992 2455666666655
No 340
>KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=59.10 E-value=15 Score=45.15 Aligned_cols=67 Identities=21% Similarity=0.218 Sum_probs=50.4
Q ss_pred EEEEEeCCCCHHHHHHHHHHHhhhcCCCcccEEEEcCCchhHHHHHHcchhcCCCCCCCCCceEEEEeCCC----Ccccc
Q 044635 730 LVEVKPQGVNKGLVAKRLLSTMQEREMLPDFVLCVGDDRSDEDMFEVIISSMAGPSIAPRAEVFACTVGRK----PSKAK 805 (831)
Q Consensus 730 ~vEV~p~gvnKG~al~~Ll~~l~~~g~~~d~vla~GD~~NDe~Mf~~a~~~~~~~~~~~~~~~~~v~vG~~----~s~A~ 805 (831)
+-|++|.+ |..-++.|.+. + .-|..+||+.||-+.|..++ +++++|.. ...|+
T Consensus 766 ~aev~P~~--K~~~Ik~lq~~----~---~~VaMVGDGINDaPALA~Ad--------------VGIaig~gs~vAieaAD 822 (951)
T KOG0207|consen 766 YAEVLPEQ--KAEKIKEIQKN----G---GPVAMVGDGINDAPALAQAD--------------VGIAIGAGSDVAIEAAD 822 (951)
T ss_pred EeccCchh--hHHHHHHHHhc----C---CcEEEEeCCCCccHHHHhhc--------------cceeeccccHHHHhhCC
Confidence 46777775 88888888664 2 45899999999999999986 57777764 45778
Q ss_pred eEe--CChhHHHHHHH
Q 044635 806 YYL--DDTVEIVRLMQ 819 (831)
Q Consensus 806 y~l--~d~~eV~~~L~ 819 (831)
.++ +|-.+|...+.
T Consensus 823 IVLmrn~L~~v~~ai~ 838 (951)
T KOG0207|consen 823 IVLMRNDLRDVPFAID 838 (951)
T ss_pred EEEEccchhhhHHHHH
Confidence 876 66677766655
No 341
>COG5083 SMP2 Uncharacterized protein involved in plasmid maintenance [General function prediction only]
Probab=58.13 E-value=4.9 Score=44.92 Aligned_cols=72 Identities=17% Similarity=0.254 Sum_probs=42.9
Q ss_pred hcCceeEEecCCCccCCCCCC-------CC-CCCHHHHHHHHHHhhcCCCeEEEECCCCHhhHHHHhCCCCCceEEecCC
Q 044635 570 RTTTRAILLDYDGTLMPQASI-------DK-SPNSKTIDILNSLCRDKNNMVFLVSAKSRKTLAEWFSPCENLGIAAEHG 641 (831)
Q Consensus 570 ~s~~rli~~D~DGTLl~~~~~-------~~-~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~~~~~~liaenG 641 (831)
+...+++++|+|||++..... .+ --+..+......+.+ .|..|.-.|.|+...+..--. -+..|++||
T Consensus 372 r~n~kiVVsDiDGTITkSD~~Ghv~~miGkdwth~gVAkLYtdI~r-NGYkI~YltsR~~Gqa~sTrs---ylrnieQng 447 (580)
T COG5083 372 RNNKKIVVSDIDGTITKSDALGHVKQMIGKDWTHNGVAKLYTDIDR-NGYKIKYLTSRSYGQADSTRS---YLRNIEQNG 447 (580)
T ss_pred eCCCcEEEEecCCcEEehhhHHHHHHHhccchhhcchhhhhhhhcc-CceEEEEEecccccchhhhhh---HHHhhhhcC
Confidence 457799999999999972210 00 113344555555544 467888889998865433222 134556666
Q ss_pred EEEE
Q 044635 642 YFFR 645 (831)
Q Consensus 642 a~i~ 645 (831)
+.+.
T Consensus 448 ykLp 451 (580)
T COG5083 448 YKLP 451 (580)
T ss_pred ccCC
Confidence 6543
No 342
>PF12000 Glyco_trans_4_3: Gkycosyl transferase family 4 group; InterPro: IPR022623 This presumed domain is functionally uncharacterised and found in bacteria. This region is about 170 amino acids in length and is found N-terminal to PF00534 from PFAM. There is a single completely conserved residue G that may be functionally important.
Probab=55.86 E-value=68 Score=32.02 Aligned_cols=51 Identities=18% Similarity=0.078 Sum_probs=35.8
Q ss_pred hHHHHHHHHHHHHHHHHHHcCCCC--CEEEEeCccccchHHHHHhhcCCCeEEEE
Q 044635 179 LWQAYVSVNKIFADRIMEVINPED--DFVWVHDYHLMVLPTFLRKRFNRVKLGFF 231 (831)
Q Consensus 179 ~w~~Y~~vN~~fa~~i~~~~~~~~--d~vwvhDyhL~llp~~lr~~~~~~~i~~f 231 (831)
.|+.=..-=+..|+++.+.-+.+. |+|.-| +-+--+-+||+.+|+++++-+
T Consensus 42 ~~e~~~~rg~av~~a~~~L~~~Gf~PDvI~~H--~GWGe~Lflkdv~P~a~li~Y 94 (171)
T PF12000_consen 42 DFEAAVLRGQAVARAARQLRAQGFVPDVIIAH--PGWGETLFLKDVFPDAPLIGY 94 (171)
T ss_pred cHHHHHHHHHHHHHHHHHHHHcCCCCCEEEEc--CCcchhhhHHHhCCCCcEEEE
Confidence 355544445555665555433222 899999 999999999999999998743
No 343
>PRK10748 flavin mononucleotide phosphatase; Provisional
Probab=55.68 E-value=28 Score=36.42 Aligned_cols=15 Identities=33% Similarity=0.445 Sum_probs=13.8
Q ss_pred CceeEEecCCCccCC
Q 044635 572 TTRAILLDYDGTLMP 586 (831)
Q Consensus 572 ~~rli~~D~DGTLl~ 586 (831)
+.|+|+||+||||++
T Consensus 9 ~~k~iiFDlDGTL~D 23 (238)
T PRK10748 9 RISALTFDLDDTLYD 23 (238)
T ss_pred CceeEEEcCcccccC
Confidence 468999999999999
No 344
>cd04300 GT1_Glycogen_Phosphorylase This is a family of oligosaccharide phosphorylases. It includes yeast and mammalian glycogen phosphorylases, plant starch/glucan phosphorylase, as well as the maltodextrin phosphorylases of bacteria. The members of this family catalyze the breakdown of oligosaccharides into glucose-1-phosphate units. They are important allosteric enzymes in carbohydrate metabolism. The allosteric control mechanisms of yeast and mammalian members of this family are different from that of bacterial members. The members of this family belong to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=54.61 E-value=1.9e+02 Score=35.88 Aligned_cols=131 Identities=11% Similarity=0.044 Sum_probs=85.8
Q ss_pred cCCcEEEEeccCcccccCHHH-HHHHHHHHH--HhCCCCC-CcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhccCCC
Q 044635 336 DQGKVMLLGVDDMDIFKGISL-KLLAMEQLL--IQHPEWQ-GKVVLVQIANPARGRGKDVKEVQAETYSTVERINQTFGK 411 (831)
Q Consensus 336 ~~~~~iil~VdRld~~KGi~~-~l~A~~~lL--~~~P~~~-~~vvLvqig~p~r~~~~~~~~l~~~i~~lv~~IN~~~g~ 411 (831)
.++...++.+=|+..-|=..+ .|.-++++. +.+|+.. ..+++|..|-..-++. .-.++-+.|..+++.||..=..
T Consensus 527 dp~slfdvq~KR~heYKRq~LNil~ii~~y~~i~~~p~~~~~P~~~IFaGKAaP~y~-~aK~iIklI~~va~~in~Dp~v 605 (797)
T cd04300 527 DPDSLFDVQVKRIHEYKRQLLNVLHIIHLYNRIKENPNADIVPRTFIFGGKAAPGYY-MAKLIIKLINAVADVVNNDPDV 605 (797)
T ss_pred CCCccEEEEeeechhhhhhhhHHHhhHHHHHHHHhCCCcCCCCeEEEEeccCCCCcH-HHHHHHHHHHHHHHHhccChhc
Confidence 346678899999999888777 666655553 3566532 2466776665442232 2246677888888888864333
Q ss_pred CCCccEEEecCCCCHHHHHHHHHHcCEeEECCCc--c-----CCCCCCCCCceEEEeccccccccc
Q 044635 412 PGYDPVVLIDEPLKFYERIAYYVVAECCLVTAVR--D-----GSEPSSPKKSMLVVSEFIGCSPSL 470 (831)
Q Consensus 412 ~~~~pv~~~~~~v~~~el~aly~~ADv~vvtS~~--e-----Gma~~~~~~g~lVlSe~~G~~~~l 470 (831)
.++-.|+|+.. ..-.--..++.+|||-.-+|++ | || -.+-.|.|.+|..-|+-.++
T Consensus 606 ~~~lkVVFlen-Y~VslAe~iipaaDvseqis~ag~EASGTsnM--K~~lNGaltlgtlDGanvEi 668 (797)
T cd04300 606 GDKLKVVFLPN-YNVSLAEKIIPAADLSEQISTAGKEASGTGNM--KFMLNGALTIGTLDGANVEI 668 (797)
T ss_pred CCceEEEEeCC-CChHHHHHhhhhhhhhhhCCCCCccccCCchh--hHHhcCceeeecccchhHHH
Confidence 34445888763 4555556789999999988874 2 33 11225788888888876655
No 345
>TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase. All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509).
Probab=53.54 E-value=12 Score=37.06 Aligned_cols=29 Identities=17% Similarity=0.371 Sum_probs=19.6
Q ss_pred ceeEEecCCCccCCCCCCCCCCCHHHHHHHHHHhhc
Q 044635 573 TRAILLDYDGTLMPQASIDKSPNSKTIDILNSLCRD 608 (831)
Q Consensus 573 ~rli~~D~DGTLl~~~~~~~~~s~~~~~~L~~L~~d 608 (831)
.++|+||+||||++. . +....+++.+.++
T Consensus 1 ~~~iiFD~DGTL~ds---~----~~~~~~~~~~~~~ 29 (185)
T TIGR02009 1 YKAVIFDMDGVIVDT---A----PLHAQAWKHLADK 29 (185)
T ss_pred CCeEEEcCCCcccCC---h----HHHHHHHHHHHHH
Confidence 478999999999992 2 3344555555543
No 346
>PF09949 DUF2183: Uncharacterized conserved protein (DUF2183); InterPro: IPR019236 This domain, found in various bacterial and fungal proteins, has no known function.
Probab=52.07 E-value=34 Score=30.92 Aligned_cols=35 Identities=20% Similarity=0.266 Sum_probs=27.6
Q ss_pred HHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHH
Q 044635 355 SLKLLAMEQLLIQHPEWQGKVVLVQIANPARGRGKDVKE 393 (831)
Q Consensus 355 ~~~l~A~~~lL~~~P~~~~~vvLvqig~p~r~~~~~~~~ 393 (831)
..|...++++++.+|+.+ +|.||..+..+.+-|.+
T Consensus 49 ~~K~~~i~~i~~~fP~~k----fiLIGDsgq~DpeiY~~ 83 (100)
T PF09949_consen 49 EHKRDNIERILRDFPERK----FILIGDSGQHDPEIYAE 83 (100)
T ss_pred hHHHHHHHHHHHHCCCCc----EEEEeeCCCcCHHHHHH
Confidence 589999999999999988 99999766555444433
No 347
>KOG2134 consensus Polynucleotide kinase 3' phosphatase [Replication, recombination and repair]
Probab=51.92 E-value=11 Score=41.95 Aligned_cols=47 Identities=26% Similarity=0.412 Sum_probs=34.1
Q ss_pred cCceeEEecCCCccCCCCCC--------C-CCCCHHHHHHHHHHhhcCCCeEEEECC
Q 044635 571 TTTRAILLDYDGTLMPQASI--------D-KSPNSKTIDILNSLCRDKNNMVFLVSA 618 (831)
Q Consensus 571 s~~rli~~D~DGTLl~~~~~--------~-~~~s~~~~~~L~~L~~d~g~~V~I~SG 618 (831)
-..+++.+||||||+...+. + ..+.++.-.-|..|.+ +|..++|.|-
T Consensus 73 ~~~K~i~FD~dgtlI~t~sg~vf~~~~~dw~~l~~~vp~Klktl~~-~g~~l~iftn 128 (422)
T KOG2134|consen 73 GGSKIIMFDYDGTLIDTKSGKVFPKGSMDWRILFPEVPSKLKTLYQ-DGIKLFIFTN 128 (422)
T ss_pred CCcceEEEecCCceeecCCcceeeccCccceeeccccchhhhhhcc-CCeEEEEEec
Confidence 45789999999999985431 1 1234666677888877 4999999763
No 348
>PF11019 DUF2608: Protein of unknown function (DUF2608); InterPro: IPR022565 This family is conserved in Bacteria. The function is not known.
Probab=51.84 E-value=25 Score=37.45 Aligned_cols=57 Identities=16% Similarity=0.239 Sum_probs=41.2
Q ss_pred EeCCCCHHHHHHHHHHHhhhcCCCcccEEEEcCCchhHHHHHHcchhcCCCCCCCCCceEEEEeCCC
Q 044635 734 KPQGVNKGLVAKRLLSTMQEREMLPDFVLCVGDDRSDEDMFEVIISSMAGPSIAPRAEVFACTVGRK 800 (831)
Q Consensus 734 ~p~gvnKG~al~~Ll~~l~~~g~~~d~vla~GD~~NDe~Mf~~a~~~~~~~~~~~~~~~~~v~vG~~ 800 (831)
.-.|.+||.++..++.++ |..|+.|+.+-|+.-.+.-.+.+-.. .+-..+|+.....
T Consensus 157 ft~~~~KG~~L~~fL~~~---~~~pk~IIfIDD~~~nl~sv~~a~k~-------~~I~f~G~~Yt~~ 213 (252)
T PF11019_consen 157 FTGGQDKGEVLKYFLDKI---NQSPKKIIFIDDNKENLKSVEKACKK-------SGIDFIGFHYTGA 213 (252)
T ss_pred EeCCCccHHHHHHHHHHc---CCCCCeEEEEeCCHHHHHHHHHHHhh-------CCCcEEEEEEcch
Confidence 456899999999999998 88999999999997666544443321 1224567776543
No 349
>TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase. These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA.
Probab=51.20 E-value=7.6 Score=39.62 Aligned_cols=36 Identities=11% Similarity=0.082 Sum_probs=31.0
Q ss_pred HHHHHHHHHHhhhcCCCcccEEEEcCCchhHHHHHHcch
Q 044635 741 GLVAKRLLSTMQEREMLPDFVLCVGDDRSDEDMFEVIIS 779 (831)
Q Consensus 741 G~al~~Ll~~l~~~g~~~d~vla~GD~~NDe~Mf~~a~~ 779 (831)
....+.+++.+ |++++++++|||+..|+.+=+.+|.
T Consensus 155 p~~~~~~~~~~---g~~~~~~l~i~D~~~di~aA~~aG~ 190 (211)
T TIGR02247 155 PRIYQLMLERL---GVAPEECVFLDDLGSNLKPAAALGI 190 (211)
T ss_pred HHHHHHHHHHc---CCCHHHeEEEcCCHHHHHHHHHcCC
Confidence 45677788887 8999999999999999999999874
No 350
>KOG1615 consensus Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=50.53 E-value=20 Score=36.18 Aligned_cols=38 Identities=13% Similarity=0.211 Sum_probs=30.7
Q ss_pred CCCHHHHHHHHHHhhcCCCeEEEECCCCHhhHHHHhCCC
Q 044635 593 SPNSKTIDILNSLCRDKNNMVFLVSAKSRKTLAEWFSPC 631 (831)
Q Consensus 593 ~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~~ 631 (831)
+.++.+.+....|.+ .|.+|+++||--+..+....+.+
T Consensus 88 ~lT~Gi~eLv~~L~~-~~~~v~liSGGF~~~i~~Va~~L 125 (227)
T KOG1615|consen 88 TLTPGIRELVSRLHA-RGTQVYLISGGFRQLIEPVAEQL 125 (227)
T ss_pred ccCCCHHHHHHHHHH-cCCeEEEEcCChHHHHHHHHHHh
Confidence 346788889999987 59999999999888777766554
No 351
>KOG0202 consensus Ca2+ transporting ATPase [Inorganic ion transport and metabolism]
Probab=50.25 E-value=24 Score=43.12 Aligned_cols=57 Identities=12% Similarity=0.197 Sum_probs=45.3
Q ss_pred HHHhcCceeEEecCCCccCCCCCCCCCCCHHHHHHHHHHhhcCCCeEEEECCCCHhhHHHHhCCC
Q 044635 567 AYKRTTTRAILLDYDGTLMPQASIDKSPNSKTIDILNSLCRDKNNMVFLVSAKSRKTLAEWFSPC 631 (831)
Q Consensus 567 ~y~~s~~rli~~D~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~~ 631 (831)
.|......|.|+-+=|-+=| |-+++.++++.+.+ .|+.|..+||-+....+.+-+.+
T Consensus 565 ~~~~~E~~LtFvGlVGi~DP-------PR~ev~~ai~~c~~-aGIrV~mITGD~~~TA~AI~r~i 621 (972)
T KOG0202|consen 565 NRATAESDLTFVGLVGILDP-------PRPEVADAIELCRQ-AGIRVIMITGDNKETAEAIAREI 621 (972)
T ss_pred cccccccceEEEEEeeccCC-------CchhHHHHHHHHHH-cCCEEEEEcCCCHHHHHHHHHHh
Confidence 34445568888888776555 77899999998766 69999999999999998887654
No 352
>PLN02811 hydrolase
Probab=49.16 E-value=25 Score=36.15 Aligned_cols=38 Identities=13% Similarity=0.006 Sum_probs=28.5
Q ss_pred HHHHHHHHHhhhcCCCcccEEEEcCCchhHHHHHHcch
Q 044635 742 LVAKRLLSTMQEREMLPDFVLCVGDDRSDEDMFEVIIS 779 (831)
Q Consensus 742 ~al~~Ll~~l~~~g~~~d~vla~GD~~NDe~Mf~~a~~ 779 (831)
......++.+...|+.++++++|||+..|+.+-+.+|.
T Consensus 141 ~~~~~a~~~~~~~~~~~~~~v~IgDs~~di~aA~~aG~ 178 (220)
T PLN02811 141 DIFLAAARRFEDGPVDPGKVLVFEDAPSGVEAAKNAGM 178 (220)
T ss_pred HHHHHHHHHhCCCCCCccceEEEeccHhhHHHHHHCCC
Confidence 34555566551113889999999999999999999874
No 353
>TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II. Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related.
Probab=48.96 E-value=21 Score=35.98 Aligned_cols=14 Identities=36% Similarity=0.617 Sum_probs=12.5
Q ss_pred ceeEEecCCCccCC
Q 044635 573 TRAILLDYDGTLMP 586 (831)
Q Consensus 573 ~rli~~D~DGTLl~ 586 (831)
.|+|+||+||||++
T Consensus 1 ik~viFD~dgTLiD 14 (198)
T TIGR01428 1 IKALVFDVYGTLFD 14 (198)
T ss_pred CcEEEEeCCCcCcc
Confidence 36899999999998
No 354
>PRK02797 4-alpha-L-fucosyltransferase; Provisional
Probab=48.87 E-value=1.6e+02 Score=32.28 Aligned_cols=114 Identities=18% Similarity=0.110 Sum_probs=70.0
Q ss_pred cCcccccCHHHHHHHHHHHHHhCCCCCCcEEEEE-EecCCCCCchhHHHHHHHHHHHHHHHhccCCCCCCccEEEecCCC
Q 044635 346 DDMDIFKGISLKLLAMEQLLIQHPEWQGKVVLVQ-IANPARGRGKDVKEVQAETYSTVERINQTFGKPGYDPVVLIDEPL 424 (831)
Q Consensus 346 dRld~~KGi~~~l~A~~~lL~~~P~~~~~vvLvq-ig~p~r~~~~~~~~l~~~i~~lv~~IN~~~g~~~~~pv~~~~~~v 424 (831)
-.=|++-+..+.|+++.+.+.. ++.++. .+.|+ + .++|.++|.+.+.+ .||.. .+..+++.+
T Consensus 153 NSgd~SN~Hie~L~~l~~~~~~------~v~ii~PlsYp~---g--n~~Yi~~V~~~~~~---lF~~~---~~~~L~e~l 215 (322)
T PRK02797 153 NSGDRSNRHIEALRALHQQFGD------NVKIIVPMGYPA---N--NQAYIEEVRQAGLA---LFGAE---NFQILTEKL 215 (322)
T ss_pred CCCCCcccHHHHHHHHHHHhCC------CeEEEEECCcCC---C--CHHHHHHHHHHHHH---hcCcc---cEEehhhhC
Confidence 3467888888888887666432 222332 23232 1 24567777776665 46532 477788999
Q ss_pred CHHHHHHHHHHcCEeEECCCc-cCCC--C-CCCCCceEEEeccccccccc-CCCcee
Q 044635 425 KFYERIAYYVVAECCLVTAVR-DGSE--P-SSPKKSMLVVSEFIGCSPSL-SGAIRV 476 (831)
Q Consensus 425 ~~~el~aly~~ADv~vvtS~~-eGma--~-~~~~~g~lVlSe~~G~~~~l-~~allV 476 (831)
+.+|+.++++.+|+.++.--| .|++ | --..+.++++++-.-.-..+ ..++-|
T Consensus 216 ~f~eYl~lL~~~Dl~~f~~~RQQgiGnl~lLi~~G~~v~l~r~n~fwqdl~e~gv~V 272 (322)
T PRK02797 216 PFDDYLALLRQCDLGYFIFARQQGIGTLCLLIQLGKPVVLSRDNPFWQDLTEQGLPV 272 (322)
T ss_pred CHHHHHHHHHhCCEEEEeechhhHHhHHHHHHHCCCcEEEecCCchHHHHHhCCCeE
Confidence 999999999999999988766 4762 0 01224577777554433334 344444
No 355
>PF13528 Glyco_trans_1_3: Glycosyl transferase family 1
Probab=48.48 E-value=2.2e+02 Score=30.74 Aligned_cols=113 Identities=10% Similarity=0.010 Sum_probs=61.5
Q ss_pred CCcEEEEeccCcccccCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhccCCCCCCcc
Q 044635 337 QGKVMLLGVDDMDIFKGISLKLLAMEQLLIQHPEWQGKVVLVQIANPARGRGKDVKEVQAETYSTVERINQTFGKPGYDP 416 (831)
Q Consensus 337 ~~~~iil~VdRld~~KGi~~~l~A~~~lL~~~P~~~~~vvLvqig~p~r~~~~~~~~l~~~i~~lv~~IN~~~g~~~~~p 416 (831)
.+++|++++|-.+.. ..++ .++..|+++ ++.+|.+. .+. + -.+
T Consensus 191 ~~~~iLv~~gg~~~~----~~~~----~l~~~~~~~----~~v~g~~~----~~~----------------~-----~~n 233 (318)
T PF13528_consen 191 DEPKILVYFGGGGPG----DLIE----ALKALPDYQ----FIVFGPNA----ADP----------------R-----PGN 233 (318)
T ss_pred CCCEEEEEeCCCcHH----HHHH----HHHhCCCCe----EEEEcCCc----ccc----------------c-----CCC
Confidence 467899999998766 3333 344467665 66555321 000 0 113
Q ss_pred EEEecCCCCHHHHHHHHHHcCEeEECCCccCC--CCCCCCCceEEEeccccccccc---------CCCceeCCC--CHHH
Q 044635 417 VVLIDEPLKFYERIAYYVVAECCLVTAVRDGS--EPSSPKKSMLVVSEFIGCSPSL---------SGAIRVNPW--NIDA 483 (831)
Q Consensus 417 v~~~~~~v~~~el~aly~~ADv~vvtS~~eGm--a~~~~~~g~lVlSe~~G~~~~l---------~~allVnP~--d~~~ 483 (831)
|.+. ..+..++..++..||++|..+=+..+ ++.. +.|.++-...|..++. .-++.+++. +++.
T Consensus 234 i~~~--~~~~~~~~~~m~~ad~vIs~~G~~t~~Ea~~~--g~P~l~ip~~~~~EQ~~~a~~l~~~G~~~~~~~~~~~~~~ 309 (318)
T PF13528_consen 234 IHVR--PFSTPDFAELMAAADLVISKGGYTTISEALAL--GKPALVIPRPGQDEQEYNARKLEELGLGIVLSQEDLTPER 309 (318)
T ss_pred EEEe--ecChHHHHHHHHhCCEEEECCCHHHHHHHHHc--CCCEEEEeCCCCchHHHHHHHHHHCCCeEEcccccCCHHH
Confidence 4432 34457899999999999986533322 1111 3344444444544443 223444443 4577
Q ss_pred HHHHHHH
Q 044635 484 VSDAMDS 490 (831)
Q Consensus 484 ~A~ai~~ 490 (831)
++++|.+
T Consensus 310 l~~~l~~ 316 (318)
T PF13528_consen 310 LAEFLER 316 (318)
T ss_pred HHHHHhc
Confidence 7777654
No 356
>COG1011 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=48.29 E-value=9.6 Score=39.18 Aligned_cols=17 Identities=47% Similarity=0.692 Sum_probs=14.9
Q ss_pred cCceeEEecCCCccCCC
Q 044635 571 TTTRAILLDYDGTLMPQ 587 (831)
Q Consensus 571 s~~rli~~D~DGTLl~~ 587 (831)
+..|.|+||+||||++.
T Consensus 2 ~~~k~i~FD~d~TL~d~ 18 (229)
T COG1011 2 MMIKAILFDLDGTLLDF 18 (229)
T ss_pred CceeEEEEecCCccccc
Confidence 45789999999999993
No 357
>TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase. These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA.
Probab=48.29 E-value=66 Score=32.64 Aligned_cols=14 Identities=36% Similarity=1.030 Sum_probs=12.8
Q ss_pred ceeEEecCCCccCC
Q 044635 573 TRAILLDYDGTLMP 586 (831)
Q Consensus 573 ~rli~~D~DGTLl~ 586 (831)
.+.|+||+||||++
T Consensus 2 ik~viFDldGtL~d 15 (211)
T TIGR02247 2 IKAVIFDFGGVLLP 15 (211)
T ss_pred ceEEEEecCCceec
Confidence 46899999999998
No 358
>COG4087 Soluble P-type ATPase [General function prediction only]
Probab=47.84 E-value=15 Score=34.64 Aligned_cols=48 Identities=10% Similarity=0.035 Sum_probs=39.6
Q ss_pred EEecCCCccCCCCCCCCCCCHHHHHHHHHHhhcCCCeEEEECCCCHhhHHHHhC
Q 044635 576 ILLDYDGTLMPQASIDKSPNSKTIDILNSLCRDKNNMVFLVSAKSRKTLAEWFS 629 (831)
Q Consensus 576 i~~D~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~ 629 (831)
.+.++++|+.. ..+.-+++.+.++.|.. -..|+|+||-.+.++.+...
T Consensus 17 ~~~~v~~tiat----gGklf~ev~e~iqeL~d--~V~i~IASgDr~gsl~~lae 64 (152)
T COG4087 17 KAGKVLYTIAT----GGKLFSEVSETIQELHD--MVDIYIASGDRKGSLVQLAE 64 (152)
T ss_pred ecceEEEEEcc----CcEEcHhhHHHHHHHHH--hheEEEecCCcchHHHHHHH
Confidence 35678899986 45666889999999976 39999999999999988875
No 359
>KOG4626 consensus O-linked N-acetylglucosamine transferase OGT [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms]
Probab=46.60 E-value=3.1e+02 Score=32.93 Aligned_cols=158 Identities=17% Similarity=0.155 Sum_probs=84.9
Q ss_pred HHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhccCCCCCCccE-EEecCCCCHHHHHHH
Q 044635 354 ISLKLLAMEQLLIQHPEWQGKVVLVQIANPARGRGKDVKEVQAETYSTVERINQTFGKPGYDPV-VLIDEPLKFYERIAY 432 (831)
Q Consensus 354 i~~~l~A~~~lL~~~P~~~~~vvLvqig~p~r~~~~~~~~l~~~i~~lv~~IN~~~g~~~~~pv-~~~~~~v~~~el~al 432 (831)
=+..|+-+.++|++-|+-+ |.+..-|.-++ +..+.-++++ | .+|- +.|..-...+|=..-
T Consensus 772 dP~~l~~W~~ILk~VPnS~----LwllrfPa~ge----~rf~ty~~~~--------G---l~p~riifs~va~k~eHvrr 832 (966)
T KOG4626|consen 772 DPSTLQMWANILKRVPNSV----LWLLRFPAVGE----QRFRTYAEQL--------G---LEPDRIIFSPVAAKEEHVRR 832 (966)
T ss_pred CHHHHHHHHHHHHhCCcce----eEEEeccccch----HHHHHHHHHh--------C---CCccceeeccccchHHHHHh
Confidence 3578899999999999876 77777776443 2333333332 2 2332 223333456777888
Q ss_pred HHHcCEeEECCCccCC--CCCCCCCceEEEec-------cccccccc--C-CCceeCCCCHHHHHH-HHHHHhcCCHHHH
Q 044635 433 YVVAECCLVTAVRDGS--EPSSPKKSMLVVSE-------FIGCSPSL--S-GAIRVNPWNIDAVSD-AMDSALEMADQEK 499 (831)
Q Consensus 433 y~~ADv~vvtS~~eGm--a~~~~~~g~lVlSe-------~~G~~~~l--~-~allVnP~d~~~~A~-ai~~aL~m~~~er 499 (831)
+..||||+-|++.-|- +++.--.|+++++= ..|++... . +-++++ +-++-.+ |+.-+. .-+.-+
T Consensus 833 ~~LaDv~LDTplcnGhTTg~dvLw~GvPmVTmpge~lAsrVa~Sll~~~Gl~hliak--~~eEY~~iaV~Lat-d~~~L~ 909 (966)
T KOG4626|consen 833 GQLADVCLDTPLCNGHTTGMDVLWAGVPMVTMPGETLASRVAASLLTALGLGHLIAK--NREEYVQIAVRLAT-DKEYLK 909 (966)
T ss_pred hhhhhhcccCcCcCCcccchhhhccCCceeecccHHHHHHHHHHHHHHcccHHHHhh--hHHHHHHHHHHhhc-CHHHHH
Confidence 9999999999998875 22221123333331 11112111 1 113333 2333333 232232 233444
Q ss_pred HHHHHHHhhhhc--cCCHHHHHHHHHHHHHHHHHHh
Q 044635 500 QLRHEKHYRYVS--THDVGYWARSFLQDLERTCREH 533 (831)
Q Consensus 500 ~~r~~~~~~~v~--~~~~~~W~~~~l~~l~~~~~~~ 533 (831)
..|++-....+. -++..+|+..+-..+.+.++.+
T Consensus 910 ~lr~~l~~~r~~splfd~~q~~~~LE~~y~~MW~~y 945 (966)
T KOG4626|consen 910 KLRAKLRKARASSPLFDTKQYAKGLERLYLQMWKKY 945 (966)
T ss_pred HHHHHHHHHhcCCCccCchHHHHHHHHHHHHHHHHh
Confidence 455444333333 3678889887666666666654
No 360
>PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional
Probab=46.43 E-value=26 Score=34.76 Aligned_cols=31 Identities=13% Similarity=0.298 Sum_probs=21.1
Q ss_pred cCceeEEecCCCccCCCCCCCCCCCHHHHHHHHHHhhc
Q 044635 571 TTTRAILLDYDGTLMPQASIDKSPNSKTIDILNSLCRD 608 (831)
Q Consensus 571 s~~rli~~D~DGTLl~~~~~~~~~s~~~~~~L~~L~~d 608 (831)
.+.++++||+||||++. . +...++++++.++
T Consensus 3 ~~~~~viFD~DGTLiDs---~----~~~~~a~~~~~~~ 33 (188)
T PRK10725 3 DRYAGLIFDMDGTILDT---E----PTHRKAWREVLGR 33 (188)
T ss_pred CcceEEEEcCCCcCccC---H----HHHHHHHHHHHHH
Confidence 34689999999999992 2 3445555555543
No 361
>TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED. HAD subfamilies caused by an overly broad single model.
Probab=46.26 E-value=25 Score=34.45 Aligned_cols=36 Identities=14% Similarity=0.066 Sum_probs=31.2
Q ss_pred HHHHHHHHHHhhhcCCCcccEEEEcCCchhHHHHHHcch
Q 044635 741 GLVAKRLLSTMQEREMLPDFVLCVGDDRSDEDMFEVIIS 779 (831)
Q Consensus 741 G~al~~Ll~~l~~~g~~~d~vla~GD~~NDe~Mf~~a~~ 779 (831)
....+.+++.+ |+++++++.|||+..|+.+-+.+|.
T Consensus 143 ~~~~~~~~~~~---~~~~~~~~~vgD~~~di~aA~~~G~ 178 (183)
T TIGR01509 143 PDIYLLALKKL---GLKPEECLFVDDSPAGIEAAKAAGM 178 (183)
T ss_pred HHHHHHHHHHc---CCCcceEEEEcCCHHHHHHHHHcCC
Confidence 56678888887 8999999999999999998888874
No 362
>TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548. All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's.
Probab=46.25 E-value=22 Score=35.86 Aligned_cols=26 Identities=19% Similarity=0.280 Sum_probs=17.4
Q ss_pred eEEecCCCccCCCCCCCCCCCHHHHHHHHHHhh
Q 044635 575 AILLDYDGTLMPQASIDKSPNSKTIDILNSLCR 607 (831)
Q Consensus 575 li~~D~DGTLl~~~~~~~~~s~~~~~~L~~L~~ 607 (831)
+|+||+||||++. . +...+++++..+
T Consensus 2 ~viFD~DGTLiDs---~----~~~~~a~~~~~~ 27 (197)
T TIGR01548 2 ALVLDMDGVMADV---S----QSYRRAIIDTVE 27 (197)
T ss_pred ceEEecCceEEec---h----HHHHHHHHHHHH
Confidence 6899999999992 2 334455555444
No 363
>TIGR00250 RNAse_H_YqgF RNAse H-fold protein YqgF. This protein family, which exhibits an RNAse H fold in crystal structure, has been proposed as a putative Holliday junction resolvase, an alternate to RuvC.
Probab=46.22 E-value=1e+02 Score=29.13 Aligned_cols=71 Identities=23% Similarity=0.267 Sum_probs=52.4
Q ss_pred HHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhccCCCCCCccEEEecCCCCHHHHHHHHHH
Q 044635 356 LKLLAMEQLLIQHPEWQGKVVLVQIANPARGRGKDVKEVQAETYSTVERINQTFGKPGYDPVVLIDEPLKFYERIAYYVV 435 (831)
Q Consensus 356 ~~l~A~~~lL~~~P~~~~~vvLvqig~p~r~~~~~~~~l~~~i~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ 435 (831)
..+.++..+.+++. +..+.||.|-..+|.. .+....+.+.++++..+|+. ||.++....+-.+-...|..
T Consensus 35 ~~~~~l~~~i~~~~-----~~~iVvGlP~~~dG~~-~~~a~~v~~f~~~L~~~~~~----~v~~~DEr~TT~~A~~~l~~ 104 (130)
T TIGR00250 35 PDWSRIEELLKEWT-----PDKIVVGLPLNMDGTE-GPLTERAQKFANRLEGRFGV----PVVLWDERLSTVEAESGLFA 104 (130)
T ss_pred HHHHHHHHHHHHcC-----CCEEEEeccCCCCcCc-CHHHHHHHHHHHHHHHHhCC----CEEEEcCCcCHHHHHHHHHH
Confidence 45677777777764 3378899998766654 45567788888888877753 79999988888887777776
Q ss_pred c
Q 044635 436 A 436 (831)
Q Consensus 436 A 436 (831)
+
T Consensus 105 ~ 105 (130)
T TIGR00250 105 R 105 (130)
T ss_pred c
Confidence 3
No 364
>PRK10563 6-phosphogluconate phosphatase; Provisional
Probab=45.54 E-value=18 Score=37.14 Aligned_cols=29 Identities=21% Similarity=0.338 Sum_probs=20.3
Q ss_pred CceeEEecCCCccCCCCCCCCCCCHHHHHHHHHHhh
Q 044635 572 TTRAILLDYDGTLMPQASIDKSPNSKTIDILNSLCR 607 (831)
Q Consensus 572 ~~rli~~D~DGTLl~~~~~~~~~s~~~~~~L~~L~~ 607 (831)
+.++++||+||||++. . +-..+++.+..+
T Consensus 3 ~~~~viFD~DGTL~d~---~----~~~~~a~~~~~~ 31 (221)
T PRK10563 3 QIEAVFFDCDGTLVDS---E----VICSRAYVTMFA 31 (221)
T ss_pred CCCEEEECCCCCCCCC---h----HHHHHHHHHHHH
Confidence 5789999999999982 1 233455555554
No 365
>PRK14985 maltodextrin phosphorylase; Provisional
Probab=45.49 E-value=1.8e+02 Score=35.95 Aligned_cols=130 Identities=14% Similarity=0.052 Sum_probs=84.0
Q ss_pred CCcEEEEeccCcccccCHHH-HHHHHHHHH--HhCCCCC-CcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhccCCCC
Q 044635 337 QGKVMLLGVDDMDIFKGISL-KLLAMEQLL--IQHPEWQ-GKVVLVQIANPARGRGKDVKEVQAETYSTVERINQTFGKP 412 (831)
Q Consensus 337 ~~~~iil~VdRld~~KGi~~-~l~A~~~lL--~~~P~~~-~~vvLvqig~p~r~~~~~~~~l~~~i~~lv~~IN~~~g~~ 412 (831)
++...++.+=|+..-|=..+ .|.-+++++ +++|+.. ..+++|..|-..-++. .-.++-+.|..++..||..=...
T Consensus 527 p~slfdvq~kR~heYKRq~Lnil~ii~~y~~i~~~p~~~~~P~~~IFaGKAaP~y~-~aK~iIklI~~va~~in~Dp~v~ 605 (798)
T PRK14985 527 PQAIFDVQIKRLHEYKRQHLNLLHILALYKEIRENPQADRVPRVFLFGAKAAPGYY-LAKNIIFAINKVAEVINNDPLVG 605 (798)
T ss_pred chhcchhhHhhhhhhhhhhhHhhhhHHHHHHHHhCCCcCCCCeEEEEeecCCCCcH-HHHHHHHHHHHHHHHhcCChhhC
Confidence 45567888999998887777 666655553 3567633 3467776665442222 22456678888888887542223
Q ss_pred CCccEEEecCCCCHHHHHHHHHHcCEeEECCCc--c-----CCCCCCCCCceEEEeccccccccc
Q 044635 413 GYDPVVLIDEPLKFYERIAYYVVAECCLVTAVR--D-----GSEPSSPKKSMLVVSEFIGCSPSL 470 (831)
Q Consensus 413 ~~~pv~~~~~~v~~~el~aly~~ADv~vvtS~~--e-----Gma~~~~~~g~lVlSe~~G~~~~l 470 (831)
+.-.|+|+. ...-.--..++.+|||..-+|++ | || -..-.|+|-+|..-|+-.++
T Consensus 606 ~~lkVVFle-nY~VslAe~lipaaDvseqis~ag~EASGTsnM--K~amNGaLtlgtlDGanvEi 667 (798)
T PRK14985 606 DKLKVVFLP-DYCVSAAELLIPAADISEQISTAGKEASGTGNM--KLALNGALTVGTLDGANVEI 667 (798)
T ss_pred CceeEEEeC-CCChHHHHHHhhhhhhhhhCCCCCccccCcchh--HHHhcCceeeecccchHHHH
Confidence 333588776 45555666789999999988874 2 33 11225788888888876554
No 366
>TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase. Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes.
Probab=44.12 E-value=24 Score=35.66 Aligned_cols=13 Identities=38% Similarity=0.565 Sum_probs=12.1
Q ss_pred eeEEecCCCccCC
Q 044635 574 RAILLDYDGTLMP 586 (831)
Q Consensus 574 rli~~D~DGTLl~ 586 (831)
|+++||+||||++
T Consensus 1 k~viFDlDGTL~d 13 (203)
T TIGR02252 1 KLITFDAVGTLLA 13 (203)
T ss_pred CeEEEecCCceee
Confidence 5799999999998
No 367
>PRK04128 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase; Provisional
Probab=44.10 E-value=56 Score=34.16 Aligned_cols=62 Identities=13% Similarity=0.308 Sum_probs=42.4
Q ss_pred CHHHHHHHHHhcCceeEEecCCCccCCCCCCCCCCCHHHHHHHHHHhhcCCCeEEEECC-CCHhhHHHHhC
Q 044635 560 SMEHIVSAYKRTTTRAILLDYDGTLMPQASIDKSPNSKTIDILNSLCRDKNNMVFLVSA-KSRKTLAEWFS 629 (831)
Q Consensus 560 ~~~~~~~~y~~s~~rli~~D~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SG-R~~~~l~~~~~ 629 (831)
+..++++.|...-..+++.|+|||+... +...++++++++..+..|.+.=| |+.+.+++++.
T Consensus 31 dp~~~a~~~~~~~~~l~ivDldga~~g~--------~~n~~~i~~i~~~~~~pv~~gGGIrs~edv~~l~~ 93 (228)
T PRK04128 31 DPVEIALRFSEYVDKIHVVDLDGAFEGK--------PKNLDVVKNIIRETGLKVQVGGGLRTYESIKDAYE 93 (228)
T ss_pred CHHHHHHHHHHhCCEEEEEECcchhcCC--------cchHHHHHHHHhhCCCCEEEcCCCCCHHHHHHHHH
Confidence 6777888887765679999999999762 23456667776643444444433 56778888775
No 368
>TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC. No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC.
Probab=43.89 E-value=33 Score=32.20 Aligned_cols=34 Identities=15% Similarity=0.253 Sum_probs=29.3
Q ss_pred CHHHHHHHHHHHhhhcC--CCcccEEEEcCCchhHHHHH
Q 044635 739 NKGLVAKRLLSTMQERE--MLPDFVLCVGDDRSDEDMFE 775 (831)
Q Consensus 739 nKG~al~~Ll~~l~~~g--~~~d~vla~GD~~NDe~Mf~ 775 (831)
.|......+++++ | +.++++++|||+..|.+-++
T Consensus 90 pkp~~~~~a~~~l---g~~~~p~~~l~igDs~~n~~~~~ 125 (128)
T TIGR01681 90 PKSPRLVEIALKL---NGVLKPKSILFVDDRPDNNEEVD 125 (128)
T ss_pred cHHHHHHHHHHHh---cCCCCcceEEEECCCHhHHHHHH
Confidence 5888999999998 8 99999999999999965443
No 369
>TIGR03590 PseG pseudaminic acid biosynthesis-associated protein PseG. This protein is found in association with enzymes involved in the biosynthesis of pseudaminic acid, a component of polysaccharide in certain Pseudomonas strains as well as a modification of flagellin in Campylobacter and Hellicobacter. The role of this protein is unclear, although it may participate in N-acetylation in conjunction with, or in the absence of PseH (TIGR03585) as it often scores above the trusted cutoff to pfam00583 representing a family of acetyltransferases.
Probab=43.73 E-value=97 Score=33.33 Aligned_cols=79 Identities=9% Similarity=-0.010 Sum_probs=47.1
Q ss_pred CcEEEEeccCcccccCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhccCCCCCCccE
Q 044635 338 GKVMLLGVDDMDIFKGISLKLLAMEQLLIQHPEWQGKVVLVQIANPARGRGKDVKEVQAETYSTVERINQTFGKPGYDPV 417 (831)
Q Consensus 338 ~~~iil~VdRld~~KGi~~~l~A~~~lL~~~P~~~~~vvLvqig~p~r~~~~~~~~l~~~i~~lv~~IN~~~g~~~~~pv 417 (831)
.++|++..|-.|+.+.....++|+.++ .++++ + .+++| +. .+.+++ +++.+.. + + .+
T Consensus 170 ~~~iLi~~GG~d~~~~~~~~l~~l~~~---~~~~~--i-~vv~G-~~---~~~~~~----l~~~~~~-~---~-----~i 226 (279)
T TIGR03590 170 LRRVLVSFGGADPDNLTLKLLSALAES---QINIS--I-TLVTG-SS---NPNLDE----LKKFAKE-Y---P-----NI 226 (279)
T ss_pred cCeEEEEeCCcCCcCHHHHHHHHHhcc---ccCce--E-EEEEC-CC---CcCHHH----HHHHHHh-C---C-----CE
Confidence 367999999999988667778777654 23332 2 23344 32 122333 3333322 1 1 23
Q ss_pred EEecCCCCHHHHHHHHHHcCEeEEC
Q 044635 418 VLIDEPLKFYERIAYYVVAECCLVT 442 (831)
Q Consensus 418 ~~~~~~v~~~el~aly~~ADv~vvt 442 (831)
.+ .++ .+++..+++.||++|.+
T Consensus 227 ~~-~~~--~~~m~~lm~~aDl~Is~ 248 (279)
T TIGR03590 227 IL-FID--VENMAELMNEADLAIGA 248 (279)
T ss_pred EE-EeC--HHHHHHHHHHCCEEEEC
Confidence 33 233 56899999999999875
No 370
>KOG1618 consensus Predicted phosphatase [General function prediction only]
Probab=41.71 E-value=20 Score=38.85 Aligned_cols=42 Identities=19% Similarity=0.359 Sum_probs=31.4
Q ss_pred CceeEEecCCCccCCCCCCCCCCCHHHHHHHHHHhhcCCC---eEEEEC
Q 044635 572 TTRAILLDYDGTLMPQASIDKSPNSKTIDILNSLCRDKNN---MVFLVS 617 (831)
Q Consensus 572 ~~rli~~D~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~---~V~I~S 617 (831)
+.--|+||+||.|+- .+.+-++..++|+.|..++|+ .+++.|
T Consensus 34 ~~fgfafDIDGVL~R----G~~~i~~~~~Alr~L~~~~g~lkIP~vfLT 78 (389)
T KOG1618|consen 34 PTFGFAFDIDGVLFR----GHRPIPGALKALRRLVDNQGQLKIPFVFLT 78 (389)
T ss_pred CceeEEEecccEEEe----cCCCCcchHHHHHHHHhcCCCeeccEEEEe
Confidence 345799999999997 556778999999999875443 344443
No 371
>COG0058 GlgP Glucan phosphorylase [Carbohydrate transport and metabolism]
Probab=41.43 E-value=1.9e+02 Score=35.55 Aligned_cols=123 Identities=14% Similarity=0.158 Sum_probs=82.9
Q ss_pred CcEEEEeccCcccccCHHHHHHHHHHHHHhCC-CCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhccCCCCCCcc
Q 044635 338 GKVMLLGVDDMDIFKGISLKLLAMEQLLIQHP-EWQGKVVLVQIANPARGRGKDVKEVQAETYSTVERINQTFGKPGYDP 416 (831)
Q Consensus 338 ~~~iil~VdRld~~KGi~~~l~A~~~lL~~~P-~~~~~vvLvqig~p~r~~~~~~~~l~~~i~~lv~~IN~~~g~~~~~p 416 (831)
+..+++.+=|+..-|=....+.=...+...-- ++..+|.+|..|-..-++. .-.++-+.|...++.||.+- .
T Consensus 486 ~~lfd~~~kRiheYKRq~Lnl~~i~~ly~~i~~d~~prv~~iFaGKAhP~y~-~aK~iIk~I~~~a~~in~~l------k 558 (750)
T COG0058 486 NALFDGQARRIHEYKRQLLNLLDIERLYRILKEDWVPRVQIIFAGKAHPADY-AAKEIIKLINDVADVINNKL------K 558 (750)
T ss_pred CcceeeeehhhhhhhhhHHhHhhHHHHHHHHhcCCCCceEEEEeccCCCcch-HHHHHHHHHHHHHHhhcccc------e
Confidence 46789999999998877776666655554333 5555677666664332222 22466778888888888732 5
Q ss_pred EEEecCCCCHHHHHHHHHHcCEeEECCCcc-------CCCCCCCCCceEEEeccccccccc
Q 044635 417 VVLIDEPLKFYERIAYYVVAECCLVTAVRD-------GSEPSSPKKSMLVVSEFIGCSPSL 470 (831)
Q Consensus 417 v~~~~~~v~~~el~aly~~ADv~vvtS~~e-------Gma~~~~~~g~lVlSe~~G~~~~l 470 (831)
|+|+.. .+-.--..++.+|||-.-+|++- || -..-.|.|-+|..-|+-.++
T Consensus 559 VvFl~n-YdvslA~~iipa~Dvweqis~a~~EASGTsnM--K~alNGaltigtlDGanvEi 616 (750)
T COG0058 559 VVFLPN-YDVSLAELLIPAADVWEQIPTAGKEASGTSNM--KAALNGALTLGTLDGANVEI 616 (750)
T ss_pred EEEeCC-CChhHHHhhcccccccccCCCCCccccCcCcc--hHHhcCCceeeccccHHHHH
Confidence 787763 44445566889999999999862 34 11225788899998987666
No 372
>PRK09456 ?-D-glucose-1-phosphatase; Provisional
Probab=41.43 E-value=33 Score=34.66 Aligned_cols=37 Identities=5% Similarity=0.057 Sum_probs=30.8
Q ss_pred HHHHHHHHHHHhhhcCCCcccEEEEcCCchhHHHHHHcch
Q 044635 740 KGLVAKRLLSTMQEREMLPDFVLCVGDDRSDEDMFEVIIS 779 (831)
Q Consensus 740 KG~al~~Ll~~l~~~g~~~d~vla~GD~~NDe~Mf~~a~~ 779 (831)
+....+.+++.+ |++++++++|||+..|+..=+.+|.
T Consensus 143 ~p~~~~~~~~~~---~~~p~~~l~vgD~~~di~aA~~aG~ 179 (199)
T PRK09456 143 EARIYQHVLQAE---GFSAADAVFFDDNADNIEAANALGI 179 (199)
T ss_pred CHHHHHHHHHHc---CCChhHeEEeCCCHHHHHHHHHcCC
Confidence 466677888887 9999999999999999877777763
No 373
>COG1819 Glycosyl transferases, related to UDP-glucuronosyltransferase [Carbohydrate transport and metabolism / Signal transduction mechanisms]
Probab=40.72 E-value=1.6e+02 Score=33.63 Aligned_cols=98 Identities=12% Similarity=0.093 Sum_probs=55.4
Q ss_pred ecCCCCHHHHHHHHHHcCEeEECCCccCCCC--CCCCCceEEEecccc--------cccccCCC--ceeCCCCHHHHHHH
Q 044635 420 IDEPLKFYERIAYYVVAECCLVTAVRDGSEP--SSPKKSMLVVSEFIG--------CSPSLSGA--IRVNPWNIDAVSDA 487 (831)
Q Consensus 420 ~~~~v~~~el~aly~~ADv~vvtS~~eGma~--~~~~~g~lVlSe~~G--------~~~~l~~a--llVnP~d~~~~A~a 487 (831)
....+|+.+ ++..||++|... |++. ++-..|+++++=-.+ ..+.+.-| +...++..+.++++
T Consensus 288 v~~~~p~~~---~l~~ad~vI~hG---G~gtt~eaL~~gvP~vv~P~~~DQ~~nA~rve~~G~G~~l~~~~l~~~~l~~a 361 (406)
T COG1819 288 VADYVPQLE---LLPRADAVIHHG---GAGTTSEALYAGVPLVVIPDGADQPLNAERVEELGAGIALPFEELTEERLRAA 361 (406)
T ss_pred EecCCCHHH---HhhhcCEEEecC---CcchHHHHHHcCCCEEEecCCcchhHHHHHHHHcCCceecCcccCCHHHHHHH
Confidence 445677666 677999999753 4421 111224333332211 12222334 44557999999999
Q ss_pred HHHHhcCCHHHHHHHHHHHhhhhccCCHHHHHHHHHHH
Q 044635 488 MDSALEMADQEKQLRHEKHYRYVSTHDVGYWARSFLQD 525 (831)
Q Consensus 488 i~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~ 525 (831)
|.++|+++. -+++.+++.+...+++...=+...+.+
T Consensus 362 v~~vL~~~~--~~~~~~~~~~~~~~~~g~~~~a~~le~ 397 (406)
T COG1819 362 VNEVLADDS--YRRAAERLAEEFKEEDGPAKAADLLEE 397 (406)
T ss_pred HHHHhcCHH--HHHHHHHHHHHhhhcccHHHHHHHHHH
Confidence 999998543 334445566666666654444444443
No 374
>TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668. This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family.
Probab=40.67 E-value=28 Score=34.41 Aligned_cols=37 Identities=24% Similarity=0.121 Sum_probs=31.7
Q ss_pred HHHHHHHHHHHhhhcCCCcccEEEEcCCc-hhHHHHHHcch
Q 044635 740 KGLVAKRLLSTMQEREMLPDFVLCVGDDR-SDEDMFEVIIS 779 (831)
Q Consensus 740 KG~al~~Ll~~l~~~g~~~d~vla~GD~~-NDe~Mf~~a~~ 779 (831)
+....+.+++.+ +++++++++|||+. .|+..=+.+|.
T Consensus 93 ~p~~~~~~l~~~---~~~~~~~l~IGDs~~~Di~aA~~aGi 130 (170)
T TIGR01668 93 PGCAFRRAHPEM---GLTSEQVAVVGDRLFTDVMGGNRNGS 130 (170)
T ss_pred ChHHHHHHHHHc---CCCHHHEEEECCcchHHHHHHHHcCC
Confidence 566788888887 89999999999998 79988888874
No 375
>PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase). This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J ....
Probab=40.62 E-value=9.9 Score=38.44 Aligned_cols=30 Identities=33% Similarity=0.337 Sum_probs=20.8
Q ss_pred ceeEEecCCCccCCCCCCCCCC----CHHHHHHHHHH
Q 044635 573 TRAILLDYDGTLMPQASIDKSP----NSKTIDILNSL 605 (831)
Q Consensus 573 ~rli~~D~DGTLl~~~~~~~~~----s~~~~~~L~~L 605 (831)
.++|+||.||||+. ..... ...+.+++..+
T Consensus 1 i~~i~fDktGTLt~---~~~~v~~~~~~~~~~~~~~~ 34 (215)
T PF00702_consen 1 IDAICFDKTGTLTQ---GKMSVAPPSNEAALAIAAAL 34 (215)
T ss_dssp ESEEEEECCTTTBE---SHHEEESCSHHHHHHHHHHH
T ss_pred CeEEEEecCCCccc---CeEEEEeccHHHHHHHHHHh
Confidence 36899999999998 44444 45555666555
No 376
>TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities.
Probab=40.57 E-value=43 Score=34.85 Aligned_cols=37 Identities=11% Similarity=0.024 Sum_probs=32.4
Q ss_pred HHHHHHHHHHHhhhcCCCcccEEEEcCCchhHHHHHHcch
Q 044635 740 KGLVAKRLLSTMQEREMLPDFVLCVGDDRSDEDMFEVIIS 779 (831)
Q Consensus 740 KG~al~~Ll~~l~~~g~~~d~vla~GD~~NDe~Mf~~a~~ 779 (831)
+.....++++.+ |+++++++++||+..|++.=+.+|.
T Consensus 154 ~p~~y~~i~~~l---gv~p~e~lfVgDs~~Di~AA~~AG~ 190 (220)
T TIGR01691 154 EAQSYVKIAGQL---GSPPREILFLSDIINELDAARKAGL 190 (220)
T ss_pred CHHHHHHHHHHh---CcChhHEEEEeCCHHHHHHHHHcCC
Confidence 456778888888 9999999999999999999888875
No 377
>COG2503 Predicted secreted acid phosphatase [General function prediction only]
Probab=40.38 E-value=35 Score=35.68 Aligned_cols=53 Identities=17% Similarity=0.413 Sum_probs=37.7
Q ss_pred hcCceeEEecCCCccCCCCC-------CC----------------CCCCHHHHHHHHHHhhcCCCeEEEECCCCHhh
Q 044635 570 RTTTRAILLDYDGTLMPQAS-------ID----------------KSPNSKTIDILNSLCRDKNNMVFLVSAKSRKT 623 (831)
Q Consensus 570 ~s~~rli~~D~DGTLl~~~~-------~~----------------~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~ 623 (831)
+-+.+.|++|+|-|+++..+ .. .++-+...+.|+-.-+ .|..|+.+|-|..+.
T Consensus 76 k~K~~aVvlDlDETvLdNs~Yqgy~v~nnk~f~pe~Wd~wV~a~~sk~vpGA~eFl~Yvn~-~Gg~ifyiSNR~~~~ 151 (274)
T COG2503 76 KGKKKAVVLDLDETVLDNSAYQGYQVLNNKGFTPETWDKWVQAKKSKAVPGAVEFLNYVNS-NGGKIFYISNRDQEN 151 (274)
T ss_pred cCCCceEEEecchHhhcCccccchhhhcCCCCCccchHHHHhhcccccCccHHHHHHHHHh-cCcEEEEEeccchhc
Confidence 34567999999999998432 11 1234567777777655 588888888888775
No 378
>TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED. HAD subfamilies caused by an overly broad single model.
Probab=40.22 E-value=12 Score=36.83 Aligned_cols=12 Identities=58% Similarity=0.924 Sum_probs=10.9
Q ss_pred eEEecCCCccCC
Q 044635 575 AILLDYDGTLMP 586 (831)
Q Consensus 575 li~~D~DGTLl~ 586 (831)
.++||+||||++
T Consensus 1 ~vlFDlDgtLv~ 12 (183)
T TIGR01509 1 AILFDLDGVLVD 12 (183)
T ss_pred CeeeccCCceec
Confidence 379999999998
No 379
>PRK09456 ?-D-glucose-1-phosphatase; Provisional
Probab=40.11 E-value=15 Score=37.28 Aligned_cols=13 Identities=8% Similarity=0.261 Sum_probs=12.0
Q ss_pred eeEEecCCCccCC
Q 044635 574 RAILLDYDGTLMP 586 (831)
Q Consensus 574 rli~~D~DGTLl~ 586 (831)
++++||+||||++
T Consensus 1 ~~viFDldgvL~d 13 (199)
T PRK09456 1 MLYIFDLGNVIVD 13 (199)
T ss_pred CEEEEeCCCcccc
Confidence 4899999999998
No 380
>PRK00109 Holliday junction resolvase-like protein; Reviewed
Probab=39.95 E-value=1.5e+02 Score=28.35 Aligned_cols=71 Identities=21% Similarity=0.234 Sum_probs=49.6
Q ss_pred HHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhccCCCCCCccEEEecCCCCHHHHHHHHHHc
Q 044635 357 KLLAMEQLLIQHPEWQGKVVLVQIANPARGRGKDVKEVQAETYSTVERINQTFGKPGYDPVVLIDEPLKFYERIAYYVVA 436 (831)
Q Consensus 357 ~l~A~~~lL~~~P~~~~~vvLvqig~p~r~~~~~~~~l~~~i~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~A 436 (831)
.+..+.++.++++ +..+.||.|...+|.. .+....+.+.++++..+++. ||+++....+-.+-...|..+
T Consensus 42 ~~~~l~~~i~~~~-----i~~iVvGlP~~~~G~~-~~~~~~v~~f~~~L~~~~~~----~v~~~DEr~TT~~A~~~l~~~ 111 (138)
T PRK00109 42 DWDRLEKLIKEWQ-----PDGLVVGLPLNMDGTE-GPRTERARKFANRLEGRFGL----PVVLVDERLSTVEAERALADV 111 (138)
T ss_pred HHHHHHHHHHHhC-----CCEEEEeccCCCCCCc-CHHHHHHHHHHHHHHHHhCC----CEEEEcCCcCHHHHHHHHHHc
Confidence 3566666766653 4478899997655543 34556777777777777643 799999988888877777654
Q ss_pred C
Q 044635 437 E 437 (831)
Q Consensus 437 D 437 (831)
.
T Consensus 112 ~ 112 (138)
T PRK00109 112 G 112 (138)
T ss_pred C
Confidence 3
No 381
>PF04312 DUF460: Protein of unknown function (DUF460); InterPro: IPR007408 This is an archaeal protein of unknown function.
Probab=39.50 E-value=29 Score=33.07 Aligned_cols=54 Identities=22% Similarity=0.282 Sum_probs=35.5
Q ss_pred ceeEEecCCCccCCCCCCCCCCCHHHHHHHHHHhhcCCCeEEEECCCC--HhhHHHHhCC
Q 044635 573 TRAILLDYDGTLMPQASIDKSPNSKTIDILNSLCRDKNNMVFLVSAKS--RKTLAEWFSP 630 (831)
Q Consensus 573 ~rli~~D~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~--~~~l~~~~~~ 630 (831)
.-+-++|+||.++.-.+....-..++++.+. + -|..|+|+|--. .+.++++-..
T Consensus 43 tgiAildL~G~~l~l~S~R~~~~~evi~~I~---~-~G~PviVAtDV~p~P~~V~Kia~~ 98 (138)
T PF04312_consen 43 TGIAILDLDGELLDLKSSRNMSRSEVIEWIS---E-YGKPVIVATDVSPPPETVKKIARS 98 (138)
T ss_pred eEEEEEecCCcEEEEEeecCCCHHHHHHHHH---H-cCCEEEEEecCCCCcHHHHHHHHH
Confidence 3477899999999854333333455555554 4 389999998654 4566666553
No 382
>COG3660 Predicted nucleoside-diphosphate-sugar epimerase [Cell envelope biogenesis, outer membrane]
Probab=39.37 E-value=2.4e+02 Score=30.16 Aligned_cols=31 Identities=19% Similarity=0.329 Sum_probs=24.9
Q ss_pred CEEEEeCccccchHHHHHhhcCCCeEEEEEe
Q 044635 203 DFVWVHDYHLMVLPTFLRKRFNRVKLGFFLH 233 (831)
Q Consensus 203 d~vwvhDyhL~llp~~lr~~~~~~~i~~flH 233 (831)
|+|.--...-.++...|++++-..++..-+|
T Consensus 72 dl~I~aGrrta~l~~~lkk~~~~~~vVqI~~ 102 (329)
T COG3660 72 DLIITAGRRTAPLAFYLKKKFGGIKVVQIQD 102 (329)
T ss_pred ceEEecccchhHHHHHHHHhcCCceEEEeeC
Confidence 7888889999999999999988765555554
No 383
>KOG2882 consensus p-Nitrophenyl phosphatase [Inorganic ion transport and metabolism]
Probab=39.07 E-value=23 Score=38.18 Aligned_cols=55 Identities=20% Similarity=0.327 Sum_probs=39.1
Q ss_pred cCceeEEecCCCccCCCCCCCCCCCHHHHHHHHHHhhcCCCeEEEECCCCHhhHHHHhCC
Q 044635 571 TTTRAILLDYDGTLMPQASIDKSPNSKTIDILNSLCRDKNNMVFLVSAKSRKTLAEWFSP 630 (831)
Q Consensus 571 s~~rli~~D~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~ 630 (831)
.+.-.|+||-||.|.. ...+-|.+.++|+.|.+. |-.++++|-.+..+.+.+++.
T Consensus 20 ~~~DtfifDcDGVlW~----g~~~ipGs~e~l~~L~~~-gK~i~fvTNNStksr~~y~kK 74 (306)
T KOG2882|consen 20 DSFDTFIFDCDGVLWL----GEKPIPGSPEALNLLKSL-GKQIIFVTNNSTKSREQYMKK 74 (306)
T ss_pred hhcCEEEEcCCcceee----cCCCCCChHHHHHHHHHc-CCcEEEEeCCCcchHHHHHHH
Confidence 3567999999999997 344556777777777764 677888876666655555543
No 384
>COG4822 CbiK Cobalamin biosynthesis protein CbiK, Co2+ chelatase [Coenzyme metabolism]
Probab=38.42 E-value=4.7e+02 Score=27.09 Aligned_cols=158 Identities=20% Similarity=0.283 Sum_probs=91.2
Q ss_pred CCChHHhhcCCChHHHHHHHhcCCeEeecCHHhHHHHHHHHHHHhCCeecccCceeeEEEcCEE-EEEEEeecccChHHH
Q 044635 236 FPSSEIYKTLPIREEILRALLNSDLIGFHTFDYARHFLSCCSRMLGLTYESKRGYIGLEYYGRT-VSIKILPVGIHMGQL 314 (831)
Q Consensus 236 fP~~e~f~~lp~r~eil~~ll~~dligf~t~~~~~~Fl~~~~r~l~~~~~~~~~~~~~~~~gr~-~~i~v~P~GId~~~~ 314 (831)
||.+++||..-. ..|++-|-.-|-|-|.|+.-+-|=|.. .|+ .... -.+.++| |++.+.+
T Consensus 33 fpDydvfrAfTS-~kIIkkLK~rdgi~~dTP~~aL~klk~------------~gy-----~eviiQ~lhiIp-G~EyEkl 93 (265)
T COG4822 33 FPDYDVFRAFTS-RKIIKKLKERDGIDFDTPIQALNKLKD------------QGY-----EEVIIQPLHIIP-GIEYEKL 93 (265)
T ss_pred CccHHHHHHHhH-HHHHHHHHhhcCcccCCHHHHHHHHHH------------ccc-----hheeeeeeeecC-chHHHHH
Confidence 888999987664 567788888999999999888665531 111 1111 1445565 8877766
Q ss_pred HHhhCCcchHHHHHHHHHHhccCCcEEEEeccCcccccCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHH
Q 044635 315 QSVLSLPGTEAKVSELIKQFHDQGKVMLLGVDDMDIFKGISLKLLAMEQLLIQHPEWQGKVVLVQIANPARGRGKDVKEV 394 (831)
Q Consensus 315 ~~~~~~~~~~~~~~~lr~~~~~~~~~iil~VdRld~~KGi~~~l~A~~~lL~~~P~~~~~vvLvqig~p~r~~~~~~~~l 394 (831)
. ..++.++..| +.+.+|.-=|.+.-.-.. +++.+..+.|-++.+=.+|..|-.+. .+... .
T Consensus 94 v---------r~V~~~~~dF----~~lkig~PlLy~k~DYe~---~v~aik~~~ppl~k~e~~vlmgHGt~--h~s~~-~ 154 (265)
T COG4822 94 V---------REVNKYSNDF----KRLKIGRPLLYYKNDYEI---CVEAIKDQIPPLNKDEILVLMGHGTD--HHSNA-A 154 (265)
T ss_pred H---------HHHHHHhhhh----heeecCCceeechhhHHH---HHHHHHHhcCCcCcCeEEEEEecCCC--ccHHH-H
Confidence 4 3455666666 233333333333322333 44555567898877777777786542 22221 1
Q ss_pred HHHHHHHHHHHhccCCCCCCccEEE--ecCCCCHHHHHHHHHHcCE
Q 044635 395 QAETYSTVERINQTFGKPGYDPVVL--IDEPLKFYERIAYYVVAEC 438 (831)
Q Consensus 395 ~~~i~~lv~~IN~~~g~~~~~pv~~--~~~~v~~~el~aly~~ADv 438 (831)
-.-++..... .+|.||.. ..+...-+.+..+++..-+
T Consensus 155 YacLd~~~~~-------~~f~~v~v~~ve~yP~~d~vi~~l~~~~~ 193 (265)
T COG4822 155 YACLDHVLDE-------YGFDNVFVAAVEGYPLVDTVIEYLRKNGI 193 (265)
T ss_pred HHHHHHHHHh-------cCCCceEEEEecCCCcHHHHHHHHHHcCC
Confidence 2223333221 24445543 4566667888888887665
No 385
>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B.
Probab=38.25 E-value=15 Score=36.58 Aligned_cols=36 Identities=31% Similarity=0.431 Sum_probs=28.2
Q ss_pred CHHHHHHHHHHHhhhcCCCcccEEEEcCCchhHHHHH
Q 044635 739 NKGLVAKRLLSTMQEREMLPDFVLCVGDDRSDEDMFE 775 (831)
Q Consensus 739 nKG~al~~Ll~~l~~~g~~~d~vla~GD~~NDe~Mf~ 775 (831)
+|..+++.+...... +.+.+.++++|||.||.+|++
T Consensus 157 ~K~~~l~~~~~~~~~-~~~~~~~~~iGDs~~D~~~lr 192 (192)
T PF12710_consen 157 GKAEALKELYIRDEE-DIDPDRVIAIGDSINDLPMLR 192 (192)
T ss_dssp HHHHHHHHHHHHHHH-THTCCEEEEEESSGGGHHHHH
T ss_pred cHHHHHHHHHHHhhc-CCCCCeEEEEECCHHHHHHhC
Confidence 699999999221111 456789999999999999986
No 386
>PHA02530 pseT polynucleotide kinase; Provisional
Probab=36.68 E-value=54 Score=35.41 Aligned_cols=38 Identities=21% Similarity=0.177 Sum_probs=29.5
Q ss_pred CHHHHHHHHHHHhhhcCC-CcccEEEEcCCchhHHHHHHcch
Q 044635 739 NKGLVAKRLLSTMQEREM-LPDFVLCVGDDRSDEDMFEVIIS 779 (831)
Q Consensus 739 nKG~al~~Ll~~l~~~g~-~~d~vla~GD~~NDe~Mf~~a~~ 779 (831)
.+....+..++.+ +. +++.+++|||+.+|+.+-+.+|-
T Consensus 252 p~p~~~~~~l~~~---~~~~~~~~~~vgD~~~d~~~a~~~Gi 290 (300)
T PHA02530 252 PDDVVKEEIFWEK---IAPKYDVLLAVDDRDQVVDMWRRIGL 290 (300)
T ss_pred CcHHHHHHHHHHH---hccCceEEEEEcCcHHHHHHHHHhCC
Confidence 3444566666655 56 57999999999999999999984
No 387
>TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509).
Probab=36.67 E-value=40 Score=33.43 Aligned_cols=12 Identities=42% Similarity=0.722 Sum_probs=11.3
Q ss_pred eEEecCCCccCC
Q 044635 575 AILLDYDGTLMP 586 (831)
Q Consensus 575 li~~D~DGTLl~ 586 (831)
+++||+||||++
T Consensus 2 ~viFDlDGTL~d 13 (184)
T TIGR01993 2 VWFFDLDNTLYP 13 (184)
T ss_pred eEEEeCCCCCCC
Confidence 689999999998
No 388
>TIGR02093 P_ylase glycogen/starch/alpha-glucan phosphorylases. This family consists of phosphorylases. Members use phosphate to break alpha 1,4 linkages between pairs of glucose residues at the end of long glucose polymers, releasing alpha-D-glucose 1-phosphate. The nomenclature convention is to preface the name according to the natural substrate, as in glycogen phosphorylase, starch phosphorylase, maltodextrin phosphorylase, etc. Name differences among these substrates reflect differences in patterns of branching with alpha 1,6 linkages. Members include allosterically regulated and unregulated forms. A related family, TIGR02094, contains examples known to act well on particularly small alpha 1,4 glucans, as may be found after import from exogenous sources.
Probab=35.37 E-value=4e+02 Score=33.14 Aligned_cols=130 Identities=12% Similarity=0.032 Sum_probs=83.6
Q ss_pred CCcEEEEeccCcccccCHHH-HHHHHHHHH--HhCCCCC-CcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhccCCCC
Q 044635 337 QGKVMLLGVDDMDIFKGISL-KLLAMEQLL--IQHPEWQ-GKVVLVQIANPARGRGKDVKEVQAETYSTVERINQTFGKP 412 (831)
Q Consensus 337 ~~~~iil~VdRld~~KGi~~-~l~A~~~lL--~~~P~~~-~~vvLvqig~p~r~~~~~~~~l~~~i~~lv~~IN~~~g~~ 412 (831)
++...++.+=|+..-|=..+ .|.-++++. ..+|+.. ..+++|..|-..-++. .-.++-+.|..++..||..=...
T Consensus 525 p~slfdvq~KR~heYKRq~LNil~ii~~y~~i~~~p~~~~~P~~~IFaGKAaP~y~-~aK~iIklI~~va~~iN~Dp~v~ 603 (794)
T TIGR02093 525 PNSIFDVQVKRLHEYKRQLLNVLHVIYLYNRIKEDPPKDIVPRTVIFGGKAAPGYH-MAKLIIKLINSVAEVVNNDPAVG 603 (794)
T ss_pred ccccchhhheechhhhHHHHHHhhhHHHHHHHHhCCCcCCCCeEEEEEecCCCCcH-HHHHHHHHHHHHHHHhccChhhC
Confidence 45667888999998887777 666655553 3456542 2466776665442332 22456778888888888643223
Q ss_pred CCccEEEecCCCCHHHHHHHHHHcCEeEECCCc--c-----CCCCCCCCCceEEEeccccccccc
Q 044635 413 GYDPVVLIDEPLKFYERIAYYVVAECCLVTAVR--D-----GSEPSSPKKSMLVVSEFIGCSPSL 470 (831)
Q Consensus 413 ~~~pv~~~~~~v~~~el~aly~~ADv~vvtS~~--e-----Gma~~~~~~g~lVlSe~~G~~~~l 470 (831)
+.-.|+|+. ...-.--..++.+||+..-+|++ | || -.+-.|.|-+|..-|+-.++
T Consensus 604 ~~lkVVFle-nY~VslAe~iipaaDvseqistag~EASGTsnM--K~alNGaltlgtlDGanvEi 665 (794)
T TIGR02093 604 DKLKVVFVP-NYNVSLAELIIPAADLSEQISTAGKEASGTGNM--KFMLNGALTIGTLDGANVEI 665 (794)
T ss_pred CceeEEEeC-CCChHHHHHhhhhhhhhhhCCCCCccccCcchh--HHHhcCcceeecccchhHHH
Confidence 344588876 34555566789999999988874 2 23 11225778888877766555
No 389
>TIGR01685 MDP-1 magnesium-dependent phosphatase-1. This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues.
Probab=33.55 E-value=70 Score=31.99 Aligned_cols=40 Identities=15% Similarity=0.092 Sum_probs=28.9
Q ss_pred CHHHHHHHHHHHhhhc---CCCcccEEEEcCCchhHHHHHHcc
Q 044635 739 NKGLVAKRLLSTMQER---EMLPDFVLCVGDDRSDEDMFEVII 778 (831)
Q Consensus 739 nKG~al~~Ll~~l~~~---g~~~d~vla~GD~~NDe~Mf~~a~ 778 (831)
+|..-...+++.+... |++++++++|||+..|+..-+.+|
T Consensus 108 ~~~kp~~~i~~~~~~~~~~gl~p~e~l~VgDs~~di~aA~~aG 150 (174)
T TIGR01685 108 NKAKQLEMILQKVNKVDPSVLKPAQILFFDDRTDNVREVWGYG 150 (174)
T ss_pred chHHHHHHHHHHhhhcccCCCCHHHeEEEcChhHhHHHHHHhC
Confidence 4555555555554332 589999999999999988877665
No 390
>TIGR01493 HAD-SF-IA-v2 Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase. The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single alignment is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only o
Probab=32.42 E-value=41 Score=32.96 Aligned_cols=26 Identities=23% Similarity=0.323 Sum_probs=17.6
Q ss_pred eEEecCCCccCCCCCCCCCCCHHHHHHHHHHhh
Q 044635 575 AILLDYDGTLMPQASIDKSPNSKTIDILNSLCR 607 (831)
Q Consensus 575 li~~D~DGTLl~~~~~~~~~s~~~~~~L~~L~~ 607 (831)
+|+||+||||++. . +...++++.+..
T Consensus 1 ~viFD~DGTL~D~---~----~~~~~~~~~~~~ 26 (175)
T TIGR01493 1 AMVFDVYGTLVDV---H----GGVRACLAAIAP 26 (175)
T ss_pred CeEEecCCcCccc---H----HHHHHHHHHhhh
Confidence 4799999999992 1 345555555543
No 391
>TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5. The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog.
Probab=31.44 E-value=83 Score=34.67 Aligned_cols=49 Identities=24% Similarity=0.250 Sum_probs=35.3
Q ss_pred CcccEEEEcCCc-hhHHHHHHcchhcCCCCCCCCCceEEEEe--CC--C-----CcccceEeCChhHHHHHH
Q 044635 757 LPDFVLCVGDDR-SDEDMFEVIISSMAGPSIAPRAEVFACTV--GR--K-----PSKAKYYLDDTVEIVRLM 818 (831)
Q Consensus 757 ~~d~vla~GD~~-NDe~Mf~~a~~~~~~~~~~~~~~~~~v~v--G~--~-----~s~A~y~l~d~~eV~~~L 818 (831)
+++.+++|||+. +|+.+=+.+|. .+|-| |. . .-.++|++++..++...|
T Consensus 262 ~~~~~~mIGD~~~tDI~ga~~~G~-------------~silV~tG~~~~~~~~~~~~p~~vv~~l~e~~~~i 320 (321)
T TIGR01456 262 PFHALYMVGDNPASDIIGAQNYGW-------------FSCLVKTGVYNGGDDLKECKPTLIVNDVFDAVTKI 320 (321)
T ss_pred ChheEEEEcCChhhhhhhHHhCCc-------------eEEEecccccCCCCCCCCCCCCEEECCHHHHHHHh
Confidence 457999999997 99998888874 24433 31 1 124678899988887765
No 392
>PLN02177 glycerol-3-phosphate acyltransferase
Probab=30.71 E-value=55 Score=38.42 Aligned_cols=34 Identities=18% Similarity=0.157 Sum_probs=24.7
Q ss_pred HHHHHHHHHHHhhhcCCCcccEEEEcCCchhHHHHHHcchh
Q 044635 740 KGLVAKRLLSTMQEREMLPDFVLCVGDDRSDEDMFEVIISS 780 (831)
Q Consensus 740 KG~al~~Ll~~l~~~g~~~d~vla~GD~~NDe~Mf~~a~~~ 780 (831)
|-.+++ +.+ |.+... .+.|||.||.+||+.+++.
T Consensus 177 Kv~rl~---~~~---g~~~~~-~aYgDS~sD~plL~~a~e~ 210 (497)
T PLN02177 177 KRDAVL---KEF---GDALPD-LGLGDRETDHDFMSICKEG 210 (497)
T ss_pred HHHHHH---HHh---CCCCce-EEEECCccHHHHHHhCCcc
Confidence 666665 333 433333 8999999999999999864
No 393
>smart00577 CPDc catalytic domain of ctd-like phosphatases.
Probab=29.85 E-value=28 Score=33.49 Aligned_cols=32 Identities=13% Similarity=-0.010 Sum_probs=24.7
Q ss_pred HHHHHHHhhhcCCCcccEEEEcCCchhHHHHHHcc
Q 044635 744 AKRLLSTMQEREMLPDFVLCVGDDRSDEDMFEVII 778 (831)
Q Consensus 744 l~~Ll~~l~~~g~~~d~vla~GD~~NDe~Mf~~a~ 778 (831)
..+.++.+ |.+++++++|||+.+|..+...++
T Consensus 104 ~~k~l~~l---~~~p~~~i~i~Ds~~~~~aa~~ng 135 (148)
T smart00577 104 YVKDLSLL---GRDLSNVIIIDDSPDSWPFHPENL 135 (148)
T ss_pred EeecHHHc---CCChhcEEEEECCHHHhhcCccCE
Confidence 34445665 889999999999999998765443
No 394
>PRK10422 lipopolysaccharide core biosynthesis protein; Provisional
Probab=29.67 E-value=4.4e+02 Score=29.11 Aligned_cols=87 Identities=20% Similarity=0.179 Sum_probs=50.6
Q ss_pred CCcEEEEeccCcccccCHH-HHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhccCCCCCCc
Q 044635 337 QGKVMLLGVDDMDIFKGIS-LKLLAMEQLLIQHPEWQGKVVLVQIANPARGRGKDVKEVQAETYSTVERINQTFGKPGYD 415 (831)
Q Consensus 337 ~~~~iil~VdRld~~KGi~-~~l~A~~~lL~~~P~~~~~vvLvqig~p~r~~~~~~~~l~~~i~~lv~~IN~~~g~~~~~ 415 (831)
.++.+++..|--...|--+ +.+.++.+.|.+. .++ ++++|.|. ++ + .+.++++++..+ . .
T Consensus 182 ~~~~i~i~pga~~~~K~Wp~e~fa~l~~~L~~~-~~~----vvl~ggp~----e~--e-~~~~~~i~~~~~----~---~ 242 (352)
T PRK10422 182 TQNYVVIQPTARQIFKCWDNDKFSAVIDALQAR-GYE----VVLTSGPD----KD--D-LACVNEIAQGCQ----T---P 242 (352)
T ss_pred CCCeEEEecCCCccccCCCHHHHHHHHHHHHHC-CCe----EEEEcCCC----hH--H-HHHHHHHHHhcC----C---C
Confidence 3467788888766777754 3555555555432 333 55566543 11 1 112233332211 1 1
Q ss_pred cEEEecCCCCHHHHHHHHHHcCEeEEC
Q 044635 416 PVVLIDEPLKFYERIAYYVVAECCLVT 442 (831)
Q Consensus 416 pv~~~~~~v~~~el~aly~~ADv~vvt 442 (831)
+++-+.+..+-.|+.++++.||++|-+
T Consensus 243 ~~~~l~g~~sL~el~ali~~a~l~v~n 269 (352)
T PRK10422 243 PVTALAGKTTFPELGALIDHAQLFIGV 269 (352)
T ss_pred ccccccCCCCHHHHHHHHHhCCEEEec
Confidence 344567788999999999999999875
No 395
>PF11019 DUF2608: Protein of unknown function (DUF2608); InterPro: IPR022565 This family is conserved in Bacteria. The function is not known.
Probab=28.68 E-value=91 Score=33.13 Aligned_cols=34 Identities=24% Similarity=0.170 Sum_probs=19.0
Q ss_pred HHHHHHHHHHhhcCCCeEEEECCCCHhhHHHHhCC
Q 044635 596 SKTIDILNSLCRDKNNMVFLVSAKSRKTLAEWFSP 630 (831)
Q Consensus 596 ~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~ 630 (831)
+.+.+.++.|.+ .|..|+..|.|+.......+..
T Consensus 84 ~~~~~~i~~lq~-~~~~v~alT~~~~~~~~~t~~~ 117 (252)
T PF11019_consen 84 SDVPNIINSLQN-KGIPVIALTARGPNMEDWTLRE 117 (252)
T ss_pred hhHHHHHHHHHH-CCCcEEEEcCCChhhHHHHHHH
Confidence 444556666654 4677777777774443333333
No 396
>PF13477 Glyco_trans_4_2: Glycosyl transferase 4-like
Probab=28.67 E-value=81 Score=29.31 Aligned_cols=40 Identities=18% Similarity=0.324 Sum_probs=28.4
Q ss_pred HHHHHHcCCCCCEEEEeCccc-cchHHHHHhhcCCCeEEEEEe
Q 044635 192 DRIMEVINPEDDFVWVHDYHL-MVLPTFLRKRFNRVKLGFFLH 233 (831)
Q Consensus 192 ~~i~~~~~~~~d~vwvhDyhL-~llp~~lr~~~~~~~i~~flH 233 (831)
.++.+..+| |+|++|...- .+++.++.+.....|+.+..|
T Consensus 67 ~k~ik~~~~--DvIh~h~~~~~~~~~~l~~~~~~~~~~i~~~h 107 (139)
T PF13477_consen 67 RKIIKKEKP--DVIHCHTPSPYGLFAMLAKKLLKNKKVIYTVH 107 (139)
T ss_pred HHHhccCCC--CEEEEecCChHHHHHHHHHHHcCCCCEEEEec
Confidence 344455555 8999999775 566666655554589999999
No 397
>PRK14057 epimerase; Provisional
Probab=27.84 E-value=4.6e+02 Score=27.95 Aligned_cols=63 Identities=11% Similarity=0.150 Sum_probs=43.1
Q ss_pred EEEEEEecCCCCCchhHHHHHHHHHHHHHHHhccCCCCCCccEEEecCCCCHHHHHHHHHH-cCEeEE
Q 044635 375 VVLVQIANPARGRGKDVKEVQAETYSTVERINQTFGKPGYDPVVLIDEPLKFYERIAYYVV-AECCLV 441 (831)
Q Consensus 375 vvLvqig~p~r~~~~~~~~l~~~i~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~-ADv~vv 441 (831)
.+||+-.+|..++.+-.++..+.|.++.+.+..+ ++.-.+-+.|.++.+.+..+..+ ||++|.
T Consensus 157 ~VLvMtV~PGfgGQ~Fi~~~l~KI~~lr~~~~~~----~~~~~IeVDGGI~~~ti~~l~~aGad~~V~ 220 (254)
T PRK14057 157 VIQLLAVNPGYGSKMRSSDLHERVAQLLCLLGDK----REGKIIVIDGSLTQDQLPSLIAQGIDRVVS 220 (254)
T ss_pred EEEEEEECCCCCchhccHHHHHHHHHHHHHHHhc----CCCceEEEECCCCHHHHHHHHHCCCCEEEE
Confidence 5688888887665544455556666666555432 33335668999999988887764 999886
No 398
>COG2248 Predicted hydrolase (metallo-beta-lactamase superfamily) [General function prediction only]
Probab=27.40 E-value=7.2e+02 Score=26.57 Aligned_cols=158 Identities=20% Similarity=0.270 Sum_probs=77.2
Q ss_pred hhHHHHHHHHHHHHHHHHHHcCCCCCEEEEeCccccchHHHHHhhcCCCeEEEEEeccCCChHHhhcCCChHHHHHHH--
Q 044635 178 SLWQAYVSVNKIFADRIMEVINPEDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYKTLPIREEILRAL-- 255 (831)
Q Consensus 178 ~~w~~Y~~vN~~fa~~i~~~~~~~~d~vwvhDyhL~llp~~lr~~~~~~~i~~flH~PfP~~e~f~~lp~r~eil~~l-- 255 (831)
..|+.-.++ .++|.+..+. -|+|-|-.||.= +|+||-..-+-.+.-.-.||-.|=
T Consensus 47 ~E~erl~~~----r~~i~~~ak~-a~VitISHYHYD------------------HhtPf~~~~y~~s~e~~~eiY~gK~l 103 (304)
T COG2248 47 RELERLRQA----REKIQRYAKK-ADVITISHYHYD------------------HHTPFFDGIYEASGETAKEIYKGKLL 103 (304)
T ss_pred HHHHHHHHH----HHHHHHHHhh-CCEEEEeeeccc------------------cCCccccchhhhcccchHHHhcCcEE
Confidence 345544433 3445555543 489999999953 788875544434333334444331
Q ss_pred hcC---CeEeecCHHhHHHHHHHHHHHhCCeecccCceeeEEEcCEEEEEE-EeecccChHHHHHhhCCcchHHHHHHHH
Q 044635 256 LNS---DLIGFHTFDYARHFLSCCSRMLGLTYESKRGYIGLEYYGRTVSIK-ILPVGIHMGQLQSVLSLPGTEAKVSELI 331 (831)
Q Consensus 256 l~~---dligf~t~~~~~~Fl~~~~r~l~~~~~~~~~~~~~~~~gr~~~i~-v~P~GId~~~~~~~~~~~~~~~~~~~lr 331 (831)
|-- +-|--....-+..|+.....+ +.+....+|. +.++++-.+... .+|-|-|-.++-.....
T Consensus 104 LlKhPte~IN~SQ~~Ra~~fl~~~~~~-~~~ie~ADgk-~f~fG~t~IefS~pvpHG~eGskLGyVl~v----------- 170 (304)
T COG2248 104 LLKHPTENINRSQRRRAYRFLESLKDI-AREIEYADGK-TFEFGGTVIEFSPPVPHGREGSKLGYVLMV----------- 170 (304)
T ss_pred EecCchhhhCHHHHHHHHHHHHHhhhh-cceeEecCCc-eEEeCCEEEEecCCCCCCCcccccceEEEE-----------
Confidence 000 011111123345577665443 2233322221 345544433322 34555443332211110
Q ss_pred HHhccCCcEEEEeccCcc-cccCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCC
Q 044635 332 KQFHDQGKVMLLGVDDMD-IFKGISLKLLAMEQLLIQHPEWQGKVVLVQIANPA 384 (831)
Q Consensus 332 ~~~~~~~~~iil~VdRld-~~KGi~~~l~A~~~lL~~~P~~~~~vvLvqig~p~ 384 (831)
.-..++.-|++..... +.++ .|++-++++.|+ +++|+.|.
T Consensus 171 --~V~dg~~~i~faSDvqGp~~~-----~~l~~i~e~~P~------v~ii~GPp 211 (304)
T COG2248 171 --AVTDGKSSIVFASDVQGPIND-----EALEFILEKRPD------VLIIGGPP 211 (304)
T ss_pred --EEecCCeEEEEcccccCCCcc-----HHHHHHHhcCCC------EEEecCCc
Confidence 0025677778887776 5554 466778899997 55566553
No 399
>PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional
Probab=27.02 E-value=67 Score=35.97 Aligned_cols=39 Identities=15% Similarity=0.085 Sum_probs=32.1
Q ss_pred CCHHHHHHHHHHHhhhcCCCcccEEEEcCCchhHHHHHHcch
Q 044635 738 VNKGLVAKRLLSTMQEREMLPDFVLCVGDDRSDEDMFEVIIS 779 (831)
Q Consensus 738 vnKG~al~~Ll~~l~~~g~~~d~vla~GD~~NDe~Mf~~a~~ 779 (831)
--|-..+..+++.+ +++++++++|||+.+|+..=+.+|.
T Consensus 104 KP~p~~l~~a~~~l---~v~~~~svmIGDs~sDi~aAk~aGi 142 (354)
T PRK05446 104 KPKTGLVEEYLAEG---AIDLANSYVIGDRETDVQLAENMGI 142 (354)
T ss_pred CCCHHHHHHHHHHc---CCCcccEEEEcCCHHHHHHHHHCCC
Confidence 34556777777776 8899999999999999999888875
No 400
>PRK13587 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase; Provisional
Probab=26.01 E-value=1.8e+02 Score=30.43 Aligned_cols=62 Identities=18% Similarity=0.357 Sum_probs=44.5
Q ss_pred CHHHHHHHHHh-c-CceeEEecCCCccCCCCCCCCCCCHHHHHHHHHHhhcCCCeEEEECC-CCHhhHHHHhC
Q 044635 560 SMEHIVSAYKR-T-TTRAILLDYDGTLMPQASIDKSPNSKTIDILNSLCRDKNNMVFLVSA-KSRKTLAEWFS 629 (831)
Q Consensus 560 ~~~~~~~~y~~-s-~~rli~~D~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SG-R~~~~l~~~~~ 629 (831)
+...+++.|.. . -..+.+.|+||+.-. .+.+.++++++++..+..+.+-=| |+.+.+++++.
T Consensus 32 dp~~~a~~~~~~~Ga~~l~ivDLd~a~~~--------~~~n~~~I~~i~~~~~~pi~vGGGIrs~e~v~~~l~ 96 (234)
T PRK13587 32 SAEESIAYYSQFECVNRIHIVDLIGAKAQ--------HAREFDYIKSLRRLTTKDIEVGGGIRTKSQIMDYFA 96 (234)
T ss_pred CHHHHHHHHHhccCCCEEEEEECcccccC--------CcchHHHHHHHHhhcCCeEEEcCCcCCHHHHHHHHH
Confidence 55668888987 4 489999999999755 245677777777654556555444 67778888885
No 401
>smart00775 LNS2 LNS2 domain. This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance.
Probab=25.49 E-value=1.4e+02 Score=29.25 Aligned_cols=39 Identities=13% Similarity=0.014 Sum_probs=30.8
Q ss_pred CHHHHHHHHHHHhhhcCCCcccEEEEcCCchhHHHHHHcch
Q 044635 739 NKGLVAKRLLSTMQEREMLPDFVLCVGDDRSDEDMFEVIIS 779 (831)
Q Consensus 739 nKG~al~~Ll~~l~~~g~~~d~vla~GD~~NDe~Mf~~a~~ 779 (831)
-|...++.|.+.+.. ....++++|||..+|..+.+.+|-
T Consensus 102 ~K~~~l~~i~~~~~~--~~~~f~~~~gn~~~D~~~y~~~gi 140 (157)
T smart00775 102 FKIACLRDIKSLFPP--QGNPFYAGFGNRITDVISYSAVGI 140 (157)
T ss_pred HHHHHHHHHHHhcCC--CCCCEEEEeCCCchhHHHHHHcCC
Confidence 488888888876521 234678889999999999999985
No 402
>PRK09722 allulose-6-phosphate 3-epimerase; Provisional
Probab=25.31 E-value=5.7e+02 Score=26.76 Aligned_cols=64 Identities=11% Similarity=0.071 Sum_probs=42.3
Q ss_pred cEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhccCCCCCCccEEEecCCCCHHHHHHHHH-HcCEeEE
Q 044635 374 KVVLVQIANPARGRGKDVKEVQAETYSTVERINQTFGKPGYDPVVLIDEPLKFYERIAYYV-VAECCLV 441 (831)
Q Consensus 374 ~vvLvqig~p~r~~~~~~~~l~~~i~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~-~ADv~vv 441 (831)
+.+||+-.+|..++.+-..+..+.+.++.+.++.+ ++.-.+.+.|.++.+.+..+.. .||++|+
T Consensus 132 D~VLvMsV~PGf~GQ~fi~~~l~KI~~lr~~~~~~----~~~~~IeVDGGI~~~~i~~~~~aGad~~V~ 196 (229)
T PRK09722 132 DKITVMTVDPGFAGQPFIPEMLDKIAELKALRERN----GLEYLIEVDGSCNQKTYEKLMEAGADVFIV 196 (229)
T ss_pred CEEEEEEEcCCCcchhccHHHHHHHHHHHHHHHhc----CCCeEEEEECCCCHHHHHHHHHcCCCEEEE
Confidence 35688888887655444445556666665554432 3334567899999988887765 4899887
No 403
>KOG0331 consensus ATP-dependent RNA helicase [RNA processing and modification]
Probab=25.13 E-value=3.8e+02 Score=31.61 Aligned_cols=95 Identities=15% Similarity=0.115 Sum_probs=67.4
Q ss_pred EEEeccCcccccCHHHHHHHHHHHHH-hCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhccCCCCCCccEEE
Q 044635 341 MLLGVDDMDIFKGISLKLLAMEQLLI-QHPEWQGKVVLVQIANPARGRGKDVKEVQAETYSTVERINQTFGKPGYDPVVL 419 (831)
Q Consensus 341 iil~VdRld~~KGi~~~l~A~~~lL~-~~P~~~~~vvLvqig~p~r~~~~~~~~l~~~i~~lv~~IN~~~g~~~~~pv~~ 419 (831)
=++++.|--.-|.+..+|=|+..+.. +...-+++---++|-.|+ .||..+|.+.+.++-...+ ...+.+
T Consensus 130 D~v~iA~TGSGKTLay~lP~i~~l~~~~~~~~~~~~P~vLVL~PT-------RELA~QV~~~~~~~~~~~~---~~~~cv 199 (519)
T KOG0331|consen 130 DLVGIARTGSGKTLAYLLPAIVHLNNEQGKLSRGDGPIVLVLAPT-------RELAVQVQAEAREFGKSLR---LRSTCV 199 (519)
T ss_pred ceEEEeccCCcchhhhhhHHHHHHHhccccccCCCCCeEEEEcCc-------HHHHHHHHHHHHHHcCCCC---ccEEEE
Confidence 36788888889999999999999887 344444443344445676 4777888887777665443 223444
Q ss_pred ecCCCCHHHHHHHHHHcCEeEECCCc
Q 044635 420 IDEPLKFYERIAYYVVAECCLVTAVR 445 (831)
Q Consensus 420 ~~~~v~~~el~aly~~ADv~vvtS~~ 445 (831)
+.|.--..++..+=+.+||++-|+-|
T Consensus 200 yGG~~~~~Q~~~l~~gvdiviaTPGR 225 (519)
T KOG0331|consen 200 YGGAPKGPQLRDLERGVDVVIATPGR 225 (519)
T ss_pred eCCCCccHHHHHHhcCCcEEEeCChH
Confidence 55555577999999999999999843
No 404
>PRK08091 ribulose-phosphate 3-epimerase; Validated
Probab=24.83 E-value=5.8e+02 Score=26.73 Aligned_cols=64 Identities=8% Similarity=0.118 Sum_probs=41.6
Q ss_pred EEEEEEecCCCCCchhHHHHHHHHHHHHHHHhccCCCCCCccEEEecCCCCHHHHHHHHHH-cCEeEEC
Q 044635 375 VVLVQIANPARGRGKDVKEVQAETYSTVERINQTFGKPGYDPVVLIDEPLKFYERIAYYVV-AECCLVT 442 (831)
Q Consensus 375 vvLvqig~p~r~~~~~~~~l~~~i~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~-ADv~vvt 442 (831)
.+||+-.+|..++..-.....+.+.++-+.+..+ ++.-.+...|.+..+.+..+..+ ||++|.-
T Consensus 143 ~VLiMtV~PGfgGQ~f~~~~l~KI~~lr~~~~~~----~~~~~IeVDGGI~~~ti~~l~~aGaD~~V~G 207 (228)
T PRK08091 143 LIQILTLDPRTGTKAPSDLILDRVIQVENRLGNR----RVEKLISIDGSMTLELASYLKQHQIDWVVSG 207 (228)
T ss_pred EEEEEEECCCCCCccccHHHHHHHHHHHHHHHhc----CCCceEEEECCCCHHHHHHHHHCCCCEEEEC
Confidence 5688888887654443344555666665555432 23335678999999988777654 9998873
No 405
>TIGR02201 heptsyl_trn_III lipopolysaccharide heptosyltransferase III, putative. This family consists of examples of the putative ADP-heptose:LPS heptosyltransferase III, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria. This enzyme may be less widely distributed than heptosyltransferases I and II.
Probab=24.70 E-value=7.6e+02 Score=27.01 Aligned_cols=86 Identities=15% Similarity=0.100 Sum_probs=47.2
Q ss_pred CcEEEEeccCcccccCHH-HHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhccCCCCCCcc
Q 044635 338 GKVMLLGVDDMDIFKGIS-LKLLAMEQLLIQHPEWQGKVVLVQIANPARGRGKDVKEVQAETYSTVERINQTFGKPGYDP 416 (831)
Q Consensus 338 ~~~iil~VdRld~~KGi~-~~l~A~~~lL~~~P~~~~~vvLvqig~p~r~~~~~~~~l~~~i~~lv~~IN~~~g~~~~~p 416 (831)
+..+++..+--.+.|.-+ +...++.+.|... .++ +|++|.|. +.-. +.++++.+. .+. .+
T Consensus 181 ~~~i~i~p~a~~~~K~Wp~e~~~~l~~~l~~~-~~~----ivl~g~p~----~~e~---~~~~~i~~~----~~~---~~ 241 (344)
T TIGR02201 181 QNYIVIQPTSRWFFKCWDNDRFSALIDALHAR-GYE----VVLTSGPD----KDEL---AMVNEIAQG----CQT---PR 241 (344)
T ss_pred CCEEEEeCCCCccccCCCHHHHHHHHHHHHhC-CCe----EEEecCCC----HHHH---HHHHHHHhh----CCC---Cc
Confidence 456777777655666553 2344444444332 333 55566542 1111 112222222 221 13
Q ss_pred EEEecCCCCHHHHHHHHHHcCEeEEC
Q 044635 417 VVLIDEPLKFYERIAYYVVAECCLVT 442 (831)
Q Consensus 417 v~~~~~~v~~~el~aly~~ADv~vvt 442 (831)
++-+.+..+-.|+.++++.||++|-+
T Consensus 242 ~~~l~g~~sL~el~ali~~a~l~Vs~ 267 (344)
T TIGR02201 242 VTSLAGKLTLPQLAALIDHARLFIGV 267 (344)
T ss_pred ccccCCCCCHHHHHHHHHhCCEEEec
Confidence 45567788999999999999998875
No 406
>PHA03392 egt ecdysteroid UDP-glucosyltransferase; Provisional
Probab=23.79 E-value=8.8e+02 Score=28.56 Aligned_cols=75 Identities=9% Similarity=0.046 Sum_probs=40.6
Q ss_pred EEecCCCCHHHHHHHHHHcCEeEECCCccCCCC--CCCC-CceEEEecccc----ccccc---CCCceeCC--CCHHHHH
Q 044635 418 VLIDEPLKFYERIAYYVVAECCLVTAVRDGSEP--SSPK-KSMLVVSEFIG----CSPSL---SGAIRVNP--WNIDAVS 485 (831)
Q Consensus 418 ~~~~~~v~~~el~aly~~ADv~vvtS~~eGma~--~~~~-~g~lVlSe~~G----~~~~l---~~allVnP--~d~~~~A 485 (831)
+++.+.+|+.++.+- ..+++||- +-|+++ ++-. +.|+|+--..+ .+.-+ +-|+.+++ .+.++++
T Consensus 348 v~i~~w~Pq~~lL~h-p~v~~fIt---HGG~~s~~Eal~~GvP~v~iP~~~DQ~~Na~rv~~~G~G~~l~~~~~t~~~l~ 423 (507)
T PHA03392 348 VLTQKWFPQRAVLKH-KNVKAFVT---QGGVQSTDEAIDALVPMVGLPMMGDQFYNTNKYVELGIGRALDTVTVSAAQLV 423 (507)
T ss_pred eEEecCCCHHHHhcC-CCCCEEEe---cCCcccHHHHHHcCCCEEECCCCccHHHHHHHHHHcCcEEEeccCCcCHHHHH
Confidence 345567888776542 45777774 334421 1111 33444433322 11111 23566654 4678999
Q ss_pred HHHHHHhcCCH
Q 044635 486 DAMDSALEMAD 496 (831)
Q Consensus 486 ~ai~~aL~m~~ 496 (831)
+||.++|+.+.
T Consensus 424 ~ai~~vl~~~~ 434 (507)
T PHA03392 424 LAIVDVIENPK 434 (507)
T ss_pred HHHHHHhCCHH
Confidence 99999997543
No 407
>TIGR01664 DNA-3'-Pase DNA 3'-phosphatase. The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region.
Probab=23.31 E-value=82 Score=31.07 Aligned_cols=36 Identities=17% Similarity=0.043 Sum_probs=28.9
Q ss_pred HHHHHHHHHHhhhcC--CCcccEEEEcCCc--------hhHHHHHHcch
Q 044635 741 GLVAKRLLSTMQERE--MLPDFVLCVGDDR--------SDEDMFEVIIS 779 (831)
Q Consensus 741 G~al~~Ll~~l~~~g--~~~d~vla~GD~~--------NDe~Mf~~a~~ 779 (831)
...++.+++.+ | ++++++++|||+. +|+..=+.+|-
T Consensus 111 p~~~~~~~~~~---~~~~~~~~~v~VGD~~~~~~~~~~~Di~aA~~aGi 156 (166)
T TIGR01664 111 TGMWEYLQSQY---NSPIKMTRSFYVGDAAGRKLDFSDADIKFAKNLGL 156 (166)
T ss_pred cHHHHHHHHHc---CCCCCchhcEEEECCCCCCCCCchhHHHHHHHCCC
Confidence 45777888877 7 8899999999986 68887777764
No 408
>KOG2670 consensus Enolase [Carbohydrate transport and metabolism]
Probab=22.53 E-value=75 Score=34.55 Aligned_cols=41 Identities=24% Similarity=0.529 Sum_probs=31.3
Q ss_pred eCChHhhhhHhhhhhccccccccccCCCCCCCCCCccChhhHHHHHHHHHH
Q 044635 139 FLPPDLFSRYYHGFCKQQLWPLFHYMLPLSPDLGGRFNRSLWQAYVSVNKI 189 (831)
Q Consensus 139 ~l~~~~~~~~y~gf~~~~lWp~~H~~~~~~~~~~~~~~~~~w~~Y~~vN~~ 189 (831)
|++.+.+-..|..|+|.. |+ +.+. ..|++++|++|..++..
T Consensus 272 ~~s~~~L~dlY~~~~k~y--Pi--vSiE------DPFdqdDw~~w~~~~~~ 312 (433)
T KOG2670|consen 272 WLSGDQLADLYKSFIKDY--PI--VSIE------DPFDQDDWEAWSKFFKE 312 (433)
T ss_pred ccCHHHHHHHHHHHHhcC--Ce--eeec------CCcchhhHHHHHHHhhc
Confidence 588899999999999984 55 2221 36999999999876653
No 409
>TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672. Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion.
Probab=22.52 E-value=96 Score=32.67 Aligned_cols=29 Identities=10% Similarity=-0.008 Sum_probs=23.2
Q ss_pred EEEEcCCchhHHHHHHcchhcCCCCCCCCCceEEEEeCCC
Q 044635 761 VLCVGDDRSDEDMFEVIISSMAGPSIAPRAEVFACTVGRK 800 (831)
Q Consensus 761 vla~GD~~NDe~Mf~~a~~~~~~~~~~~~~~~~~v~vG~~ 800 (831)
++++||+.+|+..-+.+|. ..++|..|..
T Consensus 187 ~i~vGDs~~DI~aAk~AGi-----------~~I~V~~g~~ 215 (237)
T TIGR01672 187 RIHYGDSDNDITAAKEAGA-----------RGIRILRASN 215 (237)
T ss_pred eEEEeCCHHHHHHHHHCCC-----------CEEEEEecCC
Confidence 7999999999998888874 2467777754
No 410
>COG4359 Uncharacterized conserved protein [Function unknown]
Probab=21.95 E-value=68 Score=32.25 Aligned_cols=37 Identities=8% Similarity=0.035 Sum_probs=21.1
Q ss_pred CCHHHHHHHHHHhhcCCCeEEEECCCCHhhHHHHhCCC
Q 044635 594 PNSKTIDILNSLCRDKNNMVFLVSAKSRKTLAEWFSPC 631 (831)
Q Consensus 594 ~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~~ 631 (831)
+.|..++.++...+ .++.|+|+||-....+..+|.++
T Consensus 74 Idp~fKef~e~ike-~di~fiVvSsGm~~fI~~lfe~i 110 (220)
T COG4359 74 IDPGFKEFVEWIKE-HDIPFIVVSSGMDPFIYPLFEGI 110 (220)
T ss_pred cCccHHHHHHHHHH-cCCCEEEEeCCCchHHHHHHHhh
Confidence 44555555555544 46666666666655555555543
No 411
>PRK08745 ribulose-phosphate 3-epimerase; Provisional
Probab=21.64 E-value=9.2e+02 Score=25.07 Aligned_cols=63 Identities=21% Similarity=0.151 Sum_probs=40.8
Q ss_pred EEEEEEecCCCCCchhHHHHHHHHHHHHHHHhccCCCCCCccEEEecCCCCHHHHHHHHHH-cCEeEE
Q 044635 375 VVLVQIANPARGRGKDVKEVQAETYSTVERINQTFGKPGYDPVVLIDEPLKFYERIAYYVV-AECCLV 441 (831)
Q Consensus 375 vvLvqig~p~r~~~~~~~~l~~~i~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~-ADv~vv 441 (831)
.+||+-.+|..++.+-.++..+.+.++.+.+..+ ++.-.+-+.|.++.+.+..+..+ ||++|+
T Consensus 135 ~VlvMtV~PGf~GQ~fi~~~l~KI~~l~~~~~~~----~~~~~IeVDGGI~~eti~~l~~aGaDi~V~ 198 (223)
T PRK08745 135 LVLVMSVNPGFGGQAFIPSALDKLRAIRKKIDAL----GKPIRLEIDGGVKADNIGAIAAAGADTFVA 198 (223)
T ss_pred EEEEEEECCCCCCccccHHHHHHHHHHHHHHHhc----CCCeeEEEECCCCHHHHHHHHHcCCCEEEE
Confidence 5688888886655444444555566655554432 22234567899999988877764 799887
No 412
>COG0036 Rpe Pentose-5-phosphate-3-epimerase [Carbohydrate transport and metabolism]
Probab=20.88 E-value=5.9e+02 Score=26.48 Aligned_cols=76 Identities=21% Similarity=0.200 Sum_probs=51.4
Q ss_pred HHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhccCCCCCCccEEEecCCCCHHHHHHHH-HHc
Q 044635 358 LLAMEQLLIQHPEWQGKVVLVQIANPARGRGKDVKEVQAETYSTVERINQTFGKPGYDPVVLIDEPLKFYERIAYY-VVA 436 (831)
Q Consensus 358 l~A~~~lL~~~P~~~~~vvLvqig~p~r~~~~~~~~l~~~i~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~aly-~~A 436 (831)
+.+++.+|++- .++|++-.+|..++-.-..+..+.+.++-+.+..+ + ...+-+.|.++.+....+. ..|
T Consensus 122 ~~~i~~~l~~v-----D~VllMsVnPGfgGQ~Fi~~~l~Ki~~lr~~~~~~----~-~~~IeVDGGI~~~t~~~~~~AGa 191 (220)
T COG0036 122 LEALEPVLDDV-----DLVLLMSVNPGFGGQKFIPEVLEKIRELRAMIDER----L-DILIEVDGGINLETIKQLAAAGA 191 (220)
T ss_pred HHHHHHHHhhC-----CEEEEEeECCCCcccccCHHHHHHHHHHHHHhccc----C-CeEEEEeCCcCHHHHHHHHHcCC
Confidence 45666666543 46788888887666554455666666665555442 2 3466789999999988888 789
Q ss_pred CEeEECC
Q 044635 437 ECCLVTA 443 (831)
Q Consensus 437 Dv~vvtS 443 (831)
|++|.-|
T Consensus 192 d~~VaGS 198 (220)
T COG0036 192 DVFVAGS 198 (220)
T ss_pred CEEEEEE
Confidence 9988743
No 413
>KOG2411 consensus Aspartyl-tRNA synthetase, mitochondrial [Translation, ribosomal structure and biogenesis]
Probab=20.54 E-value=2.9e+02 Score=32.04 Aligned_cols=79 Identities=19% Similarity=0.267 Sum_probs=39.0
Q ss_pred HHhHHHHHHHHHHHhCCeecccCceeeEEEcCEEEEEEEeecccChHHHHHhhCCcchHHHHHHHHHHh--c-cCCcEEE
Q 044635 266 FDYARHFLSCCSRMLGLTYESKRGYIGLEYYGRTVSIKILPVGIHMGQLQSVLSLPGTEAKVSELIKQF--H-DQGKVML 342 (831)
Q Consensus 266 ~~~~~~Fl~~~~r~l~~~~~~~~~~~~~~~~gr~~~i~v~P~GId~~~~~~~~~~~~~~~~~~~lr~~~--~-~~~~~ii 342 (831)
.++...+-+.|..+.|.-|+.- .-+++.+|-.++|. -.-|.--.+...+..|+......-+.+.+ | ++..-+-
T Consensus 497 ~~Di~~L~s~p~~~rgqhYDlV--~NGvElGGGSiRIh--n~diQr~vLe~iLk~p~~~~s~gHLL~ALd~GaPPHGGiA 572 (628)
T KOG2411|consen 497 PKDIDLLESAPEKIRGQHYDLV--VNGVELGGGSIRIH--NPDIQRYVLEDILKIPEDAESKGHLLNALDMGAPPHGGIA 572 (628)
T ss_pred hhhhhHhhcCchhhhcceeeeE--EccEeecCceeEec--CHHHHHHHHHHHhcCchhhhhHHHHHHHhhcCCCCCCcee
Confidence 3455556666666666555321 12456666655553 33333223344555554332222344444 3 4455677
Q ss_pred EeccCc
Q 044635 343 LGVDDM 348 (831)
Q Consensus 343 l~VdRl 348 (831)
+|.|||
T Consensus 573 lGlDRl 578 (628)
T KOG2411|consen 573 LGLDRL 578 (628)
T ss_pred ecHHHH
Confidence 777775
Done!