BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 044647
(93 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O29445|SERA_ARCFU D-3-phosphoglycerate dehydrogenase OS=Archaeoglobus fulgidus
(strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC
100126) GN=serA PE=3 SV=1
Length = 527
Score = 56.6 bits (135), Expect = 4e-08, Method: Composition-based stats.
Identities = 25/87 (28%), Positives = 47/87 (54%)
Query: 1 GSLLVNIVRGGLLDYEVVAHYLESGHLGGLGLDVAWTKPFDPNNPILKFQIVLITPHVGG 60
G ++VN RGG++D + +++G + LDV +P P+NP+LK V+ TPH+
Sbjct: 222 GVIVVNAARGGIVDEAALYEAIKAGKVAAAALDVYEKEPPSPDNPLLKLDNVVTTPHIAA 281
Query: 61 VTEHSYRSTAKVVGDVALQLHAGTPLR 87
T + + ++ + + + G P+R
Sbjct: 282 STREAQLNVGMIIAEDIVNMAKGLPVR 308
>sp|P35136|SERA_BACSU D-3-phosphoglycerate dehydrogenase OS=Bacillus subtilis (strain
168) GN=serA PE=3 SV=3
Length = 525
Score = 54.7 bits (130), Expect = 2e-07, Method: Composition-based stats.
Identities = 29/86 (33%), Positives = 47/86 (54%), Gaps = 1/86 (1%)
Query: 1 GSLLVNIVRGGLLDYEVVAHYLESGHLGGLGLDVAWTKPFDPNNPILKFQIVLITPHVGG 60
G L+N RGG++D + LE+GH+ G LDV +P +N ++ +V+ TPH+G
Sbjct: 221 GVRLINCARGGIIDEAALLEALENGHVAGAALDVFEVEP-PVDNKLVDHPLVIATPHLGA 279
Query: 61 VTEHSYRSTAKVVGDVALQLHAGTPL 86
T+ + + A V + LQ G P+
Sbjct: 280 STKEAQLNVAAQVSEEVLQFAKGLPV 305
>sp|P0A9T3|SERA_SHIFL D-3-phosphoglycerate dehydrogenase OS=Shigella flexneri GN=serA
PE=3 SV=2
Length = 410
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 43/72 (59%), Gaps = 4/72 (5%)
Query: 1 GSLLVNIVRGGLLDYEVVAHYLESGHLGGLGLDVAWTKPF---DP-NNPILKFQIVLITP 56
GSLL+N RG ++D + L S HL G +DV T+P DP +P+ +F VL+TP
Sbjct: 232 GSLLINASRGTVVDIPALCDALASKHLAGAAIDVFPTEPATNSDPFTSPLCEFDNVLLTP 291
Query: 57 HVGGVTEHSYRS 68
H+GG T+ + +
Sbjct: 292 HIGGSTQEAQEN 303
>sp|P0A9T0|SERA_ECOLI D-3-phosphoglycerate dehydrogenase OS=Escherichia coli (strain K12)
GN=serA PE=1 SV=2
Length = 410
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 43/72 (59%), Gaps = 4/72 (5%)
Query: 1 GSLLVNIVRGGLLDYEVVAHYLESGHLGGLGLDVAWTKPF---DP-NNPILKFQIVLITP 56
GSLL+N RG ++D + L S HL G +DV T+P DP +P+ +F VL+TP
Sbjct: 232 GSLLINASRGTVVDIPALCDALASKHLAGAAIDVFPTEPATNSDPFTSPLCEFDNVLLTP 291
Query: 57 HVGGVTEHSYRS 68
H+GG T+ + +
Sbjct: 292 HIGGSTQEAQEN 303
>sp|P0A9T1|SERA_ECOL6 D-3-phosphoglycerate dehydrogenase OS=Escherichia coli O6:H1
(strain CFT073 / ATCC 700928 / UPEC) GN=serA PE=3 SV=2
Length = 410
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 43/72 (59%), Gaps = 4/72 (5%)
Query: 1 GSLLVNIVRGGLLDYEVVAHYLESGHLGGLGLDVAWTKPF---DP-NNPILKFQIVLITP 56
GSLL+N RG ++D + L S HL G +DV T+P DP +P+ +F VL+TP
Sbjct: 232 GSLLINASRGTVVDIPALCDALASKHLAGAAIDVFPTEPATNSDPFTSPLCEFDNVLLTP 291
Query: 57 HVGGVTEHSYRS 68
H+GG T+ + +
Sbjct: 292 HIGGSTQEAQEN 303
>sp|P0A9T2|SERA_ECO57 D-3-phosphoglycerate dehydrogenase OS=Escherichia coli O157:H7
GN=serA PE=3 SV=2
Length = 410
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 43/72 (59%), Gaps = 4/72 (5%)
Query: 1 GSLLVNIVRGGLLDYEVVAHYLESGHLGGLGLDVAWTKPF---DP-NNPILKFQIVLITP 56
GSLL+N RG ++D + L S HL G +DV T+P DP +P+ +F VL+TP
Sbjct: 232 GSLLINASRGTVVDIPALCDALASKHLAGAAIDVFPTEPATNSDPFTSPLCEFDNVLLTP 291
Query: 57 HVGGVTEHSYRS 68
H+GG T+ + +
Sbjct: 292 HIGGSTQEAQEN 303
>sp|O33116|SERA_MYCLE D-3-phosphoglycerate dehydrogenase OS=Mycobacterium leprae (strain
TN) GN=serA PE=3 SV=1
Length = 528
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 46/81 (56%), Gaps = 2/81 (2%)
Query: 1 GSLLVNIVRGGLLDYEVVAHYLESGHLGGLGLDVAWTKPFDPNNPILKFQIVLITPHVGG 60
G ++VN RGGL+D +A + SGH+ GLDV T+P ++P+ + V++TPH+G
Sbjct: 224 GVIIVNAARGGLVDEVALADAVRSGHVRAAGLDVFATEPC-TDSPLFELSQVVVTPHLGA 282
Query: 61 VT-EHSYRSTAKVVGDVALQL 80
T E R+ V V L L
Sbjct: 283 STAEAQDRAGTDVAESVRLAL 303
>sp|B1L765|GYAR_KORCO Glyoxylate reductase OS=Korarchaeum cryptofilum (strain OPF8)
GN=gyaR PE=3 SV=1
Length = 332
Score = 52.4 bits (124), Expect = 8e-07, Method: Composition-based stats.
Identities = 24/82 (29%), Positives = 45/82 (54%)
Query: 2 SLLVNIVRGGLLDYEVVAHYLESGHLGGLGLDVAWTKPFDPNNPILKFQIVLITPHVGGV 61
++LVN RG ++D + + L+ G + G GLDV +P P++P+LK + V++ PH
Sbjct: 231 AILVNTSRGKVVDQKALYKALKEGWIAGAGLDVFEQEPIPPDDPLLKLENVVLAPHAASA 290
Query: 62 TEHSYRSTAKVVGDVALQLHAG 83
+ + A++V + + G
Sbjct: 291 SHETRSRMAEMVAENLIAFKRG 312
>sp|Q1QWN6|SLCC_CHRSD (S)-sulfolactate dehydrogenase OS=Chromohalobacter salexigens
(strain DSM 3043 / ATCC BAA-138 / NCIMB 13768) GN=slcC
PE=1 SV=1
Length = 309
Score = 52.0 bits (123), Expect = 9e-07, Method: Composition-based stats.
Identities = 26/65 (40%), Positives = 38/65 (58%)
Query: 1 GSLLVNIVRGGLLDYEVVAHYLESGHLGGLGLDVAWTKPFDPNNPILKFQIVLITPHVGG 60
GSLL+N RGG++D +A L HLGG LDV +P ++ + + ++ TPH+ G
Sbjct: 225 GSLLINTARGGIVDERALAASLRDRHLGGAMLDVFEEEPLTADSVLSGVEGLIATPHIAG 284
Query: 61 VTEHS 65
VT S
Sbjct: 285 VTHES 289
>sp|O27051|SERA_METTH D-3-phosphoglycerate dehydrogenase OS=Methanothermobacter
thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM
10044 / NBRC 100330 / Delta H) GN=serA PE=3 SV=1
Length = 525
Score = 51.6 bits (122), Expect = 1e-06, Method: Composition-based stats.
Identities = 26/85 (30%), Positives = 47/85 (55%), Gaps = 2/85 (2%)
Query: 2 SLLVNIVRGGLLDYEVVAHYLESGHLGGLGLDVAWTKPFDPNNPILKFQIVLITPHVGGV 61
+ +VN RGG++D + + L+ G + G LDV +P + +P+L+ + V++TPH+G
Sbjct: 225 AFIVNCARGGIIDEDALYRALKDGEIAGAALDVFEEEPPE-GSPLLELENVVLTPHIGAS 283
Query: 62 TEHSYRSTAKVVG-DVALQLHAGTP 85
T + R A +V ++ G P
Sbjct: 284 TSEAQRDAAIIVANEIKTVFQGGAP 308
>sp|P0A544|SERA_MYCTU D-3-phosphoglycerate dehydrogenase OS=Mycobacterium tuberculosis
GN=serA PE=1 SV=1
Length = 528
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 45/81 (55%), Gaps = 2/81 (2%)
Query: 1 GSLLVNIVRGGLLDYEVVAHYLESGHLGGLGLDVAWTKPFDPNNPILKFQIVLITPHVGG 60
G ++VN RGGL+D +A + GH+ GLDV T+P ++P+ + V++TPH+G
Sbjct: 224 GVIIVNAARGGLVDEAALADAITGGHVRAAGLDVFATEPC-TDSPLFELAQVVVTPHLGA 282
Query: 61 VT-EHSYRSTAKVVGDVALQL 80
T E R+ V V L L
Sbjct: 283 STAEAQDRAGTDVAESVRLAL 303
>sp|P0A545|SERA_MYCBO D-3-phosphoglycerate dehydrogenase OS=Mycobacterium bovis (strain
ATCC BAA-935 / AF2122/97) GN=serA PE=3 SV=1
Length = 528
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 45/81 (55%), Gaps = 2/81 (2%)
Query: 1 GSLLVNIVRGGLLDYEVVAHYLESGHLGGLGLDVAWTKPFDPNNPILKFQIVLITPHVGG 60
G ++VN RGGL+D +A + GH+ GLDV T+P ++P+ + V++TPH+G
Sbjct: 224 GVIIVNAARGGLVDEAALADAITGGHVRAAGLDVFATEPC-TDSPLFELAQVVVTPHLGA 282
Query: 61 VT-EHSYRSTAKVVGDVALQL 80
T E R+ V V L L
Sbjct: 283 STAEAQDRAGTDVAESVRLAL 303
>sp|A1RYE4|GYAR_THEPD Glyoxylate reductase OS=Thermofilum pendens (strain Hrk 5) GN=gyaR
PE=3 SV=1
Length = 339
Score = 51.2 bits (121), Expect = 2e-06, Method: Composition-based stats.
Identities = 23/71 (32%), Positives = 40/71 (56%)
Query: 2 SLLVNIVRGGLLDYEVVAHYLESGHLGGLGLDVAWTKPFDPNNPILKFQIVLITPHVGGV 61
+ L+N RG ++D E + L+ G + G LDV +P PN+P+ KF V++ PH+
Sbjct: 234 AYLINTARGPVVDTEALVKALKEGWIAGAALDVFEQEPLPPNHPLTKFDNVVLAPHIASA 293
Query: 62 TEHSYRSTAKV 72
T + + A++
Sbjct: 294 TIEARQRMAEL 304
>sp|Q91Z53|GRHPR_MOUSE Glyoxylate reductase/hydroxypyruvate reductase OS=Mus musculus
GN=Grhpr PE=1 SV=1
Length = 328
Score = 50.1 bits (118), Expect = 5e-06, Method: Composition-based stats.
Identities = 30/87 (34%), Positives = 49/87 (56%), Gaps = 5/87 (5%)
Query: 2 SLLVNIVRGGLLDYEVVAHYLESGHLGGLGLDVAWTKPFDPNNPILKFQIVLITPHVGGV 61
++ +NI RG +++ E + L SG + GLDV +P P++P+L + +I PH+G
Sbjct: 238 AIFINISRGDVVNQEDLYQALASGQIAAAGLDVTTPEPLPPSHPLLTLKNCVILPHIGSA 297
Query: 62 TEHSYRSTAKVVGDVALQLHAGTPLRG 88
T + R+T ++ A L AG LRG
Sbjct: 298 T-YKTRNTMSLLA--ANNLLAG--LRG 319
>sp|P33160|FDH_PSESR Formate dehydrogenase OS=Pseudomonas sp. (strain 101) PE=1 SV=3
Length = 401
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 41/87 (47%)
Query: 1 GSLLVNIVRGGLLDYEVVAHYLESGHLGGLGLDVAWTKPFDPNNPILKFQIVLITPHVGG 60
G+ +VN RG L D + VA LESG L G DV + +P ++P +TPH+ G
Sbjct: 277 GAYIVNTARGKLCDRDAVARALESGRLAGYAGDVWFPQPAPKDHPWRTMPYNGMTPHISG 336
Query: 61 VTEHSYRSTAKVVGDVALQLHAGTPLR 87
T + A ++ G P+R
Sbjct: 337 TTLTAQARYAAGTREILECFFEGRPIR 363
>sp|Q9UBQ7|GRHPR_HUMAN Glyoxylate reductase/hydroxypyruvate reductase OS=Homo sapiens
GN=GRHPR PE=1 SV=1
Length = 328
Score = 49.3 bits (116), Expect = 7e-06, Method: Composition-based stats.
Identities = 32/91 (35%), Positives = 51/91 (56%), Gaps = 6/91 (6%)
Query: 2 SLLVNIVRGGLLDYEVVAHYLESGHLGGLGLDVAWTKPFDPNNPILKFQIVLITPHVGGV 61
++ +NI RG +++ + + L SG + GLDV +P N+P+L + +I PH+G
Sbjct: 238 AVFINISRGDVVNQDDLYQALASGKIAAAGLDVTSPEPLPTNHPLLTLKNCVILPHIGSA 297
Query: 62 TEHSYRSTAKVVGDVALQLHAGTPLRGIEPV 92
T H R+T ++ A L AG LRG EP+
Sbjct: 298 T-HRTRNTMSLLA--ANNLLAG--LRG-EPM 322
>sp|P43885|SERA_HAEIN D-3-phosphoglycerate dehydrogenase OS=Haemophilus influenzae
(strain ATCC 51907 / DSM 11121 / KW20 / Rd) GN=serA PE=3
SV=1
Length = 410
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 42/72 (58%), Gaps = 4/72 (5%)
Query: 1 GSLLVNIVRGGLLDYEVVAHYLESGHLGGLGLDVAWTKPFDPN----NPILKFQIVLITP 56
G++L+N RG ++D + +A L+ G L G +DV +P N +P+ +F V++TP
Sbjct: 233 GAILINAARGTVVDIDALAQALKDGKLQGAAIDVFPVEPASINEEFISPLREFDNVILTP 292
Query: 57 HVGGVTEHSYRS 68
H+GG T + +
Sbjct: 293 HIGGSTAEAQEN 304
>sp|Q2VEQ7|DDH_HALMT D-2-hydroxyacid dehydrogenase OS=Haloferax mediterranei (strain
ATCC 33500 / DSM 1411 / JCM 8866 / NBRC 14739 / NCIMB
2177 / R-4) GN=ddh PE=1 SV=1
Length = 308
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 43/83 (51%)
Query: 4 LVNIVRGGLLDYEVVAHYLESGHLGGLGLDVAWTKPFDPNNPILKFQIVLITPHVGGVTE 63
LVN+ RG ++ + L+SG + G LDV +P ++P+ F+ VLITPHV T
Sbjct: 221 LVNVARGPVVVESDLVAALDSGDIAGAALDVFSEEPLPEDSPLWDFEDVLITPHVSAATS 280
Query: 64 HSYRSTAKVVGDVALQLHAGTPL 86
+ A ++ + ++ G L
Sbjct: 281 KYHEDVAALIRENIEKIATGDEL 303
>sp|O32264|TKRA_BACSU Probable 2-ketogluconate reductase OS=Bacillus subtilis (strain
168) GN=yvcT PE=3 SV=1
Length = 325
Score = 48.1 bits (113), Expect = 1e-05, Method: Composition-based stats.
Identities = 22/61 (36%), Positives = 35/61 (57%)
Query: 2 SLLVNIVRGGLLDYEVVAHYLESGHLGGLGLDVAWTKPFDPNNPILKFQIVLITPHVGGV 61
++ VNI RG +D + + L+ G + G GLDV +P +NP+L+ V + PH+G
Sbjct: 233 AIFVNISRGKTVDEKALIRALQEGWIRGAGLDVYEKEPVTQDNPLLQLDNVTLLPHIGSA 292
Query: 62 T 62
T
Sbjct: 293 T 293
>sp|Q8U3Y2|GYAR_PYRFU Glyoxylate reductase OS=Pyrococcus furiosus (strain ATCC 43587 /
DSM 3638 / JCM 8422 / Vc1) GN=gyaR PE=3 SV=1
Length = 336
Score = 47.4 bits (111), Expect = 2e-05, Method: Composition-based stats.
Identities = 24/73 (32%), Positives = 42/73 (57%), Gaps = 1/73 (1%)
Query: 2 SLLVNIVRGGLLDYEVVAHYLESGHLGGLGLDVAWTKPFDPNNPILKFQIVLITPHVGGV 61
++LVNI RG ++D + + L+ G + G GLDV +P+ N + V++TPH+G
Sbjct: 234 AILVNIARGKVVDTKALIKALKEGWIAGAGLDVFEEEPY-YNEELFSLDNVVLTPHIGSA 292
Query: 62 TEHSYRSTAKVVG 74
T + + A++V
Sbjct: 293 TFEAREAMAELVA 305
>sp|P73821|SERA_SYNY3 D-3-phosphoglycerate dehydrogenase OS=Synechocystis sp. (strain PCC
6803 / Kazusa) GN=serA PE=3 SV=1
Length = 554
Score = 47.4 bits (111), Expect = 2e-05, Method: Composition-based stats.
Identities = 26/84 (30%), Positives = 45/84 (53%), Gaps = 1/84 (1%)
Query: 4 LVNIVRGGLLDYEVVAHYLESGHLGGLGLDVAWTKPFDPNNPILKFQIVLITPHVGGVTE 63
++N RGG++D E + +E+ +GG LDV +P + + +F V++TPH+G TE
Sbjct: 253 IINCSRGGIIDEEALVTAIETAQIGGAALDVFAQEPLGESR-LREFSNVILTPHLGASTE 311
Query: 64 HSYRSTAKVVGDVALQLHAGTPLR 87
+ + A V + + G P R
Sbjct: 312 EAQVNVAVDVAEQIRDVLLGLPAR 335
>sp|C5A1V0|GYAR_THEGJ Glyoxylate reductase OS=Thermococcus gammatolerans (strain DSM
15229 / JCM 11827 / EJ3) GN=gyaR PE=3 SV=1
Length = 334
Score = 46.6 bits (109), Expect = 4e-05, Method: Composition-based stats.
Identities = 24/73 (32%), Positives = 41/73 (56%), Gaps = 1/73 (1%)
Query: 2 SLLVNIVRGGLLDYEVVAHYLESGHLGGLGLDVAWTKPFDPNNPILKFQIVLITPHVGGV 61
++LVNI RG ++D E + L+ G + G GLDV +P+ N + + V++ PH+G
Sbjct: 234 AILVNIARGKVVDTEALIKALKEGWIAGAGLDVFEEEPY-YNEELFSLKNVILAPHIGSA 292
Query: 62 TEHSYRSTAKVVG 74
T + A++V
Sbjct: 293 TFGAREGMAELVA 305
>sp|Q9YAW4|GYAR_AERPE Glyoxylate reductase OS=Aeropyrum pernix (strain ATCC 700893 / DSM
11879 / JCM 9820 / NBRC 100138 / K1) GN=gyaR PE=3 SV=2
Length = 335
Score = 46.6 bits (109), Expect = 5e-05, Method: Composition-based stats.
Identities = 20/64 (31%), Positives = 34/64 (53%)
Query: 2 SLLVNIVRGGLLDYEVVAHYLESGHLGGLGLDVAWTKPFDPNNPILKFQIVLITPHVGGV 61
++LVN RG ++D + L G + LDV +P +PN+P+ F+ V++ PH
Sbjct: 235 AILVNTGRGAIVDTGALVKALREGWIAAAALDVFEEEPLNPNHPLTAFKNVVLAPHAASA 294
Query: 62 TEHS 65
T +
Sbjct: 295 TRET 298
>sp|O58320|GYAR_PYRHO Glyoxylate reductase OS=Pyrococcus horikoshii (strain ATCC 700860 /
DSM 12428 / JCM 9974 / NBRC 100139 / OT-3) GN=gyaR PE=1
SV=2
Length = 334
Score = 46.6 bits (109), Expect = 5e-05, Method: Composition-based stats.
Identities = 23/73 (31%), Positives = 41/73 (56%), Gaps = 1/73 (1%)
Query: 2 SLLVNIVRGGLLDYEVVAHYLESGHLGGLGLDVAWTKPFDPNNPILKFQIVLITPHVGGV 61
++L+NI RG ++D + L+ G + G GLDV +P+ N + K V++TPH+G
Sbjct: 234 AILINIARGKVVDTNALVKALKEGWIAGAGLDVFEEEPY-YNEELFKLDNVVLTPHIGSA 292
Query: 62 TEHSYRSTAKVVG 74
+ + A++V
Sbjct: 293 SFGAREGMAELVA 305
>sp|Q9W758|CTBP2_XENLA C-terminal-binding protein 2 OS=Xenopus laevis GN=ctbp2 PE=1 SV=1
Length = 437
Score = 46.6 bits (109), Expect = 5e-05, Method: Composition-based stats.
Identities = 24/66 (36%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
Query: 1 GSLLVNIVRGGLLDYEVVAHYLESGHLGGLGLDVAWTKPFD-PNNPILKFQIVLITPHVG 59
G LVN RGGL+D + +A L+ G + G LDV ++PF P+ ++ TPH
Sbjct: 261 GCFLVNTARGGLVDEKALAQALKDGRIRGAALDVHESEPFSFSQGPLKDAPNLICTPHTA 320
Query: 60 GVTEHS 65
+EH+
Sbjct: 321 WYSEHA 326
>sp|P45250|Y1556_HAEIN Putative 2-hydroxyacid dehydrogenase HI_1556 OS=Haemophilus
influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
GN=HI_1556 PE=1 SV=1
Length = 315
Score = 46.6 bits (109), Expect = 5e-05, Method: Composition-based stats.
Identities = 28/89 (31%), Positives = 49/89 (55%), Gaps = 8/89 (8%)
Query: 1 GSLLVNIVRGGLLDYEVVAHYLESGHLGGLGLDVAWTKPFDPNNPIL----KFQIVLITP 56
G+ L+N RG L+D + L++GHLGG LDV +P + +NP++ ++ITP
Sbjct: 225 GAFLINTGRGPLIDELALVDALKTGHLGGAALDVMVKEPPEKDNPLILAAKTMPNLIITP 284
Query: 57 HVGGVTEHSYRS-TAKVVGDV---ALQLH 81
H+ ++ + + KV+ ++ QLH
Sbjct: 285 HIAWASDSAVTTLVGKVMQNIEEFVQQLH 313
>sp|Q58424|SERA_METJA D-3-phosphoglycerate dehydrogenase OS=Methanocaldococcus jannaschii
(strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC
100440) GN=serA PE=3 SV=1
Length = 524
Score = 46.6 bits (109), Expect = 5e-05, Method: Composition-based stats.
Identities = 24/74 (32%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Query: 2 SLLVNIVRGGLLDYEVVAHYLESGHLGGLGLDVAWTKPFDPNNPILKFQIVLITPHVGGV 61
+++VN RGGL+D + + L+ G + LDV +P +NP+L V+ TPH G
Sbjct: 224 AIIVNCARGGLIDEKALYEALKEGKIRAAALDVFEEEP-PKDNPLLTLDNVIGTPHQGAS 282
Query: 62 TEHSYRSTAKVVGD 75
TE + ++ +V +
Sbjct: 283 TEEAQKAAGTIVAE 296
>sp|O88712|CTBP1_MOUSE C-terminal-binding protein 1 OS=Mus musculus GN=Ctbp1 PE=1 SV=2
Length = 441
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
Query: 1 GSLLVNIVRGGLLDYEVVAHYLESGHLGGLGLDVAWTKPFD-PNNPILKFQIVLITPHVG 59
G+ LVN RGGL+D + +A L+ G + G LDV ++PF P+ ++ TPH
Sbjct: 258 GAFLVNTARGGLVDEKALAQALKEGRIRGAALDVHESEPFSFSQGPLKDAPNLICTPHAA 317
Query: 60 GVTEHS 65
+E +
Sbjct: 318 WYSEQA 323
>sp|Q13363|CTBP1_HUMAN C-terminal-binding protein 1 OS=Homo sapiens GN=CTBP1 PE=1 SV=2
Length = 440
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
Query: 1 GSLLVNIVRGGLLDYEVVAHYLESGHLGGLGLDVAWTKPFD-PNNPILKFQIVLITPHVG 59
G+ LVN RGGL+D + +A L+ G + G LDV ++PF P+ ++ TPH
Sbjct: 258 GAFLVNTARGGLVDEKALAQALKEGRIRGAALDVHESEPFSFSQGPLKDAPNLICTPHAA 317
Query: 60 GVTEHS 65
+E +
Sbjct: 318 WYSEQA 323
>sp|Q9YHU0|CTBP1_XENLA C-terminal-binding protein 1 OS=Xenopus laevis GN=ctbp1 PE=2 SV=1
Length = 440
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
Query: 1 GSLLVNIVRGGLLDYEVVAHYLESGHLGGLGLDVAWTKPFD-PNNPILKFQIVLITPHVG 59
G+ LVN RGGL+D + +A L+ G + G LDV ++PF P+ ++ TPH
Sbjct: 258 GAFLVNTARGGLVDEKALAQALKEGRIRGAALDVHESEPFSFTQGPLKDAPNLICTPHAA 317
Query: 60 GVTEHS 65
+E +
Sbjct: 318 WYSEQA 323
>sp|Q54UH8|SERA_DICDI D-3-phosphoglycerate dehydrogenase OS=Dictyostelium discoideum
GN=serA PE=1 SV=1
Length = 407
Score = 45.8 bits (107), Expect = 7e-05, Method: Composition-based stats.
Identities = 28/84 (33%), Positives = 43/84 (51%), Gaps = 4/84 (4%)
Query: 1 GSLLVNIVRGGLLDYEVVAHYLESGHLGGLGLDVAWTKPF----DPNNPILKFQIVLITP 56
GS L+N RG ++ +A+ L SGHL G +DV +P D + K ++TP
Sbjct: 232 GSYLLNASRGKVVQIPHLANALRSGHLAGAAVDVYPEEPSANCKDWECELQKCPNTILTP 291
Query: 57 HVGGVTEHSYRSTAKVVGDVALQL 80
H+GG TE + + V D+ +Q
Sbjct: 292 HIGGSTEEAQEAIGLEVSDLIVQF 315
>sp|Q05709|VANH_ENTFC D-specific alpha-keto acid dehydrogenase OS=Enterococcus faecium
GN=vanH PE=1 SV=1
Length = 322
Score = 45.4 bits (106), Expect = 1e-04, Method: Composition-based stats.
Identities = 32/85 (37%), Positives = 41/85 (48%), Gaps = 15/85 (17%)
Query: 1 GSLLVNIVRGGLLDYEVVAHYLESGHLGGLGLDV-----------AWTKPFDPNNPILKF 49
G+ L+N RG L+D + LE+G LGG LDV KP D N +LK
Sbjct: 223 GAFLINTGRGPLVDTYELVKALENGKLGGAALDVLEGEEEFFYSDCTQKPID-NQFLLKL 281
Query: 50 QI---VLITPHVGGVTEHSYRSTAK 71
Q V+ITPH TE + R T +
Sbjct: 282 QRMPNVIITPHTAYYTEQALRDTVE 306
>sp|Q9C4M5|GYAR_THELI Glyoxylate reductase OS=Thermococcus litoralis GN=gyaR PE=1 SV=1
Length = 331
Score = 45.1 bits (105), Expect = 1e-04, Method: Composition-based stats.
Identities = 22/73 (30%), Positives = 40/73 (54%), Gaps = 1/73 (1%)
Query: 2 SLLVNIVRGGLLDYEVVAHYLESGHLGGLGLDVAWTKPFDPNNPILKFQIVLITPHVGGV 61
++L+N RG ++D + L+ G + G GLDV +P+ N + K + V++ PH+G
Sbjct: 234 AILINTSRGAVVDTNALIKALKEGWIAGAGLDVFEEEPY-YNEELFKLKNVVLAPHIGSA 292
Query: 62 TEHSYRSTAKVVG 74
T + A++V
Sbjct: 293 THEAREGMAELVA 305
>sp|C6DJ88|GHRB_PECCP Glyoxylate/hydroxypyruvate reductase B OS=Pectobacterium
carotovorum subsp. carotovorum (strain PC1) GN=ghrB PE=3
SV=1
Length = 320
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 38/75 (50%)
Query: 1 GSLLVNIVRGGLLDYEVVAHYLESGHLGGLGLDVAWTKPFDPNNPILKFQIVLITPHVGG 60
++L+NI RG ++D + + L G + G GLDV +P ++P+L V+ PH+G
Sbjct: 225 SAILINIGRGAVVDEDALTEALVKGTIQGAGLDVFVKEPLPVDSPLLDLPNVVALPHIGS 284
Query: 61 VTEHSYRSTAKVVGD 75
T + A D
Sbjct: 285 ATHETRYDMAACAVD 299
>sp|Q9ZRI8|FDH_HORVU Formate dehydrogenase, mitochondrial OS=Hordeum vulgare PE=2 SV=1
Length = 377
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 34/62 (54%)
Query: 1 GSLLVNIVRGGLLDYEVVAHYLESGHLGGLGLDVAWTKPFDPNNPILKFQIVLITPHVGG 60
G ++VN RG ++D + VA SGH+ G G DV + +P ++P +TPH+ G
Sbjct: 275 GVIIVNNARGAIMDTQAVADACSSGHIAGYGGDVWFPQPAPKDHPWRYMPNHAMTPHISG 334
Query: 61 VT 62
T
Sbjct: 335 TT 336
>sp|Q59516|DHGY_METEA Glycerate dehydrogenase OS=Methylobacterium extorquens (strain ATCC
14718 / DSM 1338 / AM1) GN=hprA PE=1 SV=3
Length = 314
Score = 44.3 bits (103), Expect = 2e-04, Method: Composition-based stats.
Identities = 26/91 (28%), Positives = 45/91 (49%), Gaps = 2/91 (2%)
Query: 2 SLLVNIVRGGLLDYEVVAHYLESGHLGGLGLDVAWTKPFDPNNPILKFQI--VLITPHVG 59
++L+N RGGL+D + L+ G +GG G DV +P N + + +++TPHV
Sbjct: 223 AILINTARGGLVDEAALLQALKDGTIGGAGFDVVAQEPPKDGNILCDADLPNLIVTPHVA 282
Query: 60 GVTEHSYRSTAKVVGDVALQLHAGTPLRGIE 90
++ + + A + D AG P +E
Sbjct: 283 WASKEAMQILADQLVDNVEAFVAGKPQNVVE 313
>sp|P56545|CTBP2_HUMAN C-terminal-binding protein 2 OS=Homo sapiens GN=CTBP2 PE=1 SV=1
Length = 445
Score = 44.3 bits (103), Expect = 2e-04, Method: Composition-based stats.
Identities = 23/66 (34%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
Query: 1 GSLLVNIVRGGLLDYEVVAHYLESGHLGGLGLDVAWTKPFD-PNNPILKFQIVLITPHVG 59
G+ LVN RGGL+D + +A L+ G + G LDV ++PF P+ ++ TPH
Sbjct: 264 GAFLVNAARGGLVDEKALAQALKEGRIRGAALDVHESEPFSFAQGPLKDAPNLICTPHTA 323
Query: 60 GVTEHS 65
+E +
Sbjct: 324 WYSEQA 329
>sp|Q0VCQ1|CTBP2_BOVIN C-terminal-binding protein 2 OS=Bos taurus GN=CTBP2 PE=1 SV=1
Length = 445
Score = 44.3 bits (103), Expect = 2e-04, Method: Composition-based stats.
Identities = 23/66 (34%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
Query: 1 GSLLVNIVRGGLLDYEVVAHYLESGHLGGLGLDVAWTKPFD-PNNPILKFQIVLITPHVG 59
G+ LVN RGGL+D + +A L+ G + G LDV ++PF P+ ++ TPH
Sbjct: 264 GAFLVNAARGGLVDEKALAQALKEGRIRGAALDVHESEPFSFAQGPLKDAPNLICTPHTA 323
Query: 60 GVTEHS 65
+E +
Sbjct: 324 WYSEQA 329
>sp|O04130|SERA_ARATH D-3-phosphoglycerate dehydrogenase, chloroplastic OS=Arabidopsis
thaliana GN=At1g17745 PE=1 SV=2
Length = 624
Score = 44.3 bits (103), Expect = 2e-04, Method: Composition-based stats.
Identities = 20/70 (28%), Positives = 40/70 (57%)
Query: 1 GSLLVNIVRGGLLDYEVVAHYLESGHLGGLGLDVAWTKPFDPNNPILKFQIVLITPHVGG 60
G L+N+ RGG++D + + L++G + LDV +P ++ +++ + V +TPH+G
Sbjct: 304 GVRLINVARGGVIDEDALVRALDAGIVAQAALDVFCEEPPSKDSRLIQHENVTVTPHLGA 363
Query: 61 VTEHSYRSTA 70
T+ + A
Sbjct: 364 STKEAQEGVA 373
>sp|Q9EQH5|CTBP2_RAT C-terminal-binding protein 2 OS=Rattus norvegicus GN=Ctbp2 PE=1
SV=2
Length = 445
Score = 43.9 bits (102), Expect = 3e-04, Method: Composition-based stats.
Identities = 23/66 (34%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
Query: 1 GSLLVNIVRGGLLDYEVVAHYLESGHLGGLGLDVAWTKPFD-PNNPILKFQIVLITPHVG 59
G+ LVN RGGL+D + +A L+ G + G LDV ++PF P+ ++ TPH
Sbjct: 264 GAFLVNAARGGLVDEKALAQALKEGRIRGAALDVHESEPFSFAQGPLKDAPNLICTPHTA 323
Query: 60 GVTEHS 65
+E +
Sbjct: 324 WYSEQA 329
>sp|P56546|CTBP2_MOUSE C-terminal-binding protein 2 OS=Mus musculus GN=Ctbp2 PE=1 SV=2
Length = 445
Score = 43.9 bits (102), Expect = 3e-04, Method: Composition-based stats.
Identities = 23/66 (34%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
Query: 1 GSLLVNIVRGGLLDYEVVAHYLESGHLGGLGLDVAWTKPFD-PNNPILKFQIVLITPHVG 59
G+ LVN RGGL+D + +A L+ G + G LDV ++PF P+ ++ TPH
Sbjct: 264 GAFLVNAARGGLVDEKALAQALKEGRIRGAALDVHESEPFSFAQGPLKDAPNLICTPHTA 323
Query: 60 GVTEHS 65
+E +
Sbjct: 324 WYSEQA 329
>sp|Q9Z2F5|CTBP1_RAT C-terminal-binding protein 1 OS=Rattus norvegicus GN=Ctbp1 PE=1
SV=3
Length = 430
Score = 43.9 bits (102), Expect = 3e-04, Method: Composition-based stats.
Identities = 23/66 (34%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
Query: 1 GSLLVNIVRGGLLDYEVVAHYLESGHLGGLGLDVAWTKPFD-PNNPILKFQIVLITPHVG 59
G+ LVN RGGL+D + +A L+ G + G LDV ++PF P+ ++ TPH
Sbjct: 247 GAFLVNTARGGLVDEKALAQALKEGRIRGAALDVHESEPFSFSQGPLKDAPNLICTPHAA 306
Query: 60 GVTEHS 65
+E +
Sbjct: 307 WYSEQA 312
>sp|A1JT62|GHRB_YERE8 Glyoxylate/hydroxypyruvate reductase B OS=Yersinia enterocolitica
serotype O:8 / biotype 1B (strain 8081) GN=ghrB PE=3
SV=1
Length = 326
Score = 43.9 bits (102), Expect = 3e-04, Method: Composition-based stats.
Identities = 24/83 (28%), Positives = 41/83 (49%)
Query: 2 SLLVNIVRGGLLDYEVVAHYLESGHLGGLGLDVAWTKPFDPNNPILKFQIVLITPHVGGV 61
++L+N RG ++D + + L+ G + GLDV +P +P+LK V+ PH+G
Sbjct: 230 AILINAGRGPVVDEQALIAALQDGTIHAAGLDVFAQEPLPVESPLLKLPNVVAVPHIGSA 289
Query: 62 TEHSYRSTAKVVGDVALQLHAGT 84
T + + A D + GT
Sbjct: 290 THETRYNMAACAVDNLIAALTGT 312
>sp|B6YWH0|GYAR_THEON Glyoxylate reductase OS=Thermococcus onnurineus (strain NA1)
GN=gyaR PE=3 SV=1
Length = 334
Score = 43.9 bits (102), Expect = 3e-04, Method: Composition-based stats.
Identities = 23/73 (31%), Positives = 39/73 (53%), Gaps = 1/73 (1%)
Query: 2 SLLVNIVRGGLLDYEVVAHYLESGHLGGLGLDVAWTKPFDPNNPILKFQIVLITPHVGGV 61
++LVNI RG ++D E + L G + G GLDV +P+ + + V++ PH+G
Sbjct: 234 AILVNIARGKVVDTEALVKALREGWIAGAGLDVFEEEPY-YHEELFSLDNVVLAPHIGSA 292
Query: 62 TEHSYRSTAKVVG 74
T + A++V
Sbjct: 293 TYGAREGMAELVA 305
>sp|Q1CD80|GHRB_YERPN Glyoxylate/hydroxypyruvate reductase B OS=Yersinia pestis bv.
Antiqua (strain Nepal516) GN=ghrB PE=3 SV=1
Length = 326
Score = 43.5 bits (101), Expect = 4e-04, Method: Composition-based stats.
Identities = 23/83 (27%), Positives = 42/83 (50%)
Query: 2 SLLVNIVRGGLLDYEVVAHYLESGHLGGLGLDVAWTKPFDPNNPILKFQIVLITPHVGGV 61
++L+N RG ++D + + L+ G + GLDV +P ++P+L + V+ PH+G
Sbjct: 230 AILINAGRGPVVDEQTLIAALQDGTIHAAGLDVFEQEPLPVDSPLLTLRNVVAVPHIGSA 289
Query: 62 TEHSYRSTAKVVGDVALQLHAGT 84
T + + A D + GT
Sbjct: 290 THETRYNMAACAVDNLINALTGT 312
>sp|B1JH01|GHRB_YERPY Glyoxylate/hydroxypyruvate reductase B OS=Yersinia
pseudotuberculosis serotype O:3 (strain YPIII) GN=ghrB
PE=3 SV=1
Length = 326
Score = 43.5 bits (101), Expect = 4e-04, Method: Composition-based stats.
Identities = 23/83 (27%), Positives = 42/83 (50%)
Query: 2 SLLVNIVRGGLLDYEVVAHYLESGHLGGLGLDVAWTKPFDPNNPILKFQIVLITPHVGGV 61
++L+N RG ++D + + L+ G + GLDV +P ++P+L + V+ PH+G
Sbjct: 230 AILINAGRGPVVDEQALIAALQDGTIHAAGLDVFEQEPLPVDSPLLTLRNVVAVPHIGSA 289
Query: 62 TEHSYRSTAKVVGDVALQLHAGT 84
T + + A D + GT
Sbjct: 290 THETRYNMAACAVDNLINALTGT 312
>sp|A7MKR1|GHRB_CROS8 Glyoxylate/hydroxypyruvate reductase B OS=Cronobacter sakazakii
(strain ATCC BAA-894) GN=ghrB PE=3 SV=1
Length = 324
Score = 43.5 bits (101), Expect = 4e-04, Method: Composition-based stats.
Identities = 21/74 (28%), Positives = 38/74 (51%)
Query: 2 SLLVNIVRGGLLDYEVVAHYLESGHLGGLGLDVAWTKPFDPNNPILKFQIVLITPHVGGV 61
++ +N RG ++D + L+SG + GLDV +P ++P+L + V+ PH+G
Sbjct: 230 AIFINAGRGPVVDENALIAALQSGEIHAAGLDVFEQEPLSKDSPLLTMKNVVALPHIGSA 289
Query: 62 TEHSYRSTAKVVGD 75
T + + A D
Sbjct: 290 THETRYNMAACAVD 303
>sp|Q663W4|GHRB_YERPS Glyoxylate/hydroxypyruvate reductase B OS=Yersinia
pseudotuberculosis serotype I (strain IP32953) GN=ghrB
PE=3 SV=1
Length = 326
Score = 43.5 bits (101), Expect = 4e-04, Method: Composition-based stats.
Identities = 23/83 (27%), Positives = 42/83 (50%)
Query: 2 SLLVNIVRGGLLDYEVVAHYLESGHLGGLGLDVAWTKPFDPNNPILKFQIVLITPHVGGV 61
++L+N RG ++D + + L+ G + GLDV +P ++P+L + V+ PH+G
Sbjct: 230 AILINAGRGPVVDEQALIAALQDGTIHAAGLDVFEQEPLPVDSPLLTLRNVVAVPHIGSA 289
Query: 62 TEHSYRSTAKVVGDVALQLHAGT 84
T + + A D + GT
Sbjct: 290 THETRYNMAACAVDNLINALTGT 312
>sp|A4TGN1|GHRB_YERPP Glyoxylate/hydroxypyruvate reductase B OS=Yersinia pestis (strain
Pestoides F) GN=ghrB PE=3 SV=1
Length = 326
Score = 43.5 bits (101), Expect = 4e-04, Method: Composition-based stats.
Identities = 23/83 (27%), Positives = 42/83 (50%)
Query: 2 SLLVNIVRGGLLDYEVVAHYLESGHLGGLGLDVAWTKPFDPNNPILKFQIVLITPHVGGV 61
++L+N RG ++D + + L+ G + GLDV +P ++P+L + V+ PH+G
Sbjct: 230 AILINAGRGPVVDEQALIAALQDGTIHAAGLDVFEQEPLPVDSPLLTLRNVVAVPHIGSA 289
Query: 62 TEHSYRSTAKVVGDVALQLHAGT 84
T + + A D + GT
Sbjct: 290 THETRYNMAACAVDNLINALTGT 312
>sp|A9R4G6|GHRB_YERPG Glyoxylate/hydroxypyruvate reductase B OS=Yersinia pestis bv.
Antiqua (strain Angola) GN=ghrB PE=3 SV=1
Length = 326
Score = 43.5 bits (101), Expect = 4e-04, Method: Composition-based stats.
Identities = 23/83 (27%), Positives = 42/83 (50%)
Query: 2 SLLVNIVRGGLLDYEVVAHYLESGHLGGLGLDVAWTKPFDPNNPILKFQIVLITPHVGGV 61
++L+N RG ++D + + L+ G + GLDV +P ++P+L + V+ PH+G
Sbjct: 230 AILINAGRGPVVDEQALIAALQDGTIHAAGLDVFEQEPLPVDSPLLTLRNVVAVPHIGSA 289
Query: 62 TEHSYRSTAKVVGDVALQLHAGT 84
T + + A D + GT
Sbjct: 290 THETRYNMAACAVDNLINALTGT 312
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.142 0.433
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 38,086,835
Number of Sequences: 539616
Number of extensions: 1454841
Number of successful extensions: 3351
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 201
Number of HSP's successfully gapped in prelim test: 99
Number of HSP's that attempted gapping in prelim test: 3108
Number of HSP's gapped (non-prelim): 305
length of query: 93
length of database: 191,569,459
effective HSP length: 63
effective length of query: 30
effective length of database: 157,573,651
effective search space: 4727209530
effective search space used: 4727209530
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 55 (25.8 bits)