Your job contains 1 sequence.
>044652
MENEFFLNAGIPAPVAMPIWPSAAMEIQIQATNEMMNCSSEQSSDCFFNPNNWEKSTDHS
LQFDSALSSIVSSPAASNSNISNESSVIRELIGKLGNIGNNSGAGEITPHSLAPYINNNS
NNNNGSSSTNASCYTTPLNSPPKLNLPMSLGNSMPLNSSVAEFSADPGFAERAARFSRFG
SRSFNGRSTGQFVPNHNPDQFGLSRSNNNPNPMTANEKLPRVSSSPSLKVLGSQAQATGN
KSPQDRSELANSQEESSVSEQVPNDFNSRKRKAVSKGKGKETAASPSVNNTTKVAEANAS
ESSKNKRCKPNEGKANGNGAVKAEDEGDDKQAKANNAKPPEPPKDYIHVRARRGQATDSH
SLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMKLASVN
TRLELNVDALMSKDIYQPNKPLPHSIFQIDSSASAFFSHQPQQNPALHGNISNGTMTQCP
VDPLDNALCRNLSMQLPQLEQFTETIPQFQNFGEDDLQSIVQMGFGQNPNSETSLQSQSF
HGSNQAPHMKAEL
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 044652
(553 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2079676 - symbol:AT3G07340 "AT3G07340" species... 601 1.3e-80 4
TAIR|locus:2152551 - symbol:AT5G48560 "AT5G48560" species... 615 2.9e-72 2
UNIPROTKB|Q5N802 - symbol:P0004D12.24 "BHLH transcription... 621 6.8e-65 2
UNIPROTKB|Q84QW1 - symbol:OJ1191_A10.109 "BHLH transcript... 533 2.4e-51 1
TAIR|locus:2095198 - symbol:AT3G23690 "AT3G23690" species... 474 1.8e-50 2
TAIR|locus:2201906 - symbol:AT1G10120 "AT1G10120" species... 381 1.2e-39 2
UNIPROTKB|Q69JJ6 - symbol:OSJNBa0026C08.22 "TA1 protein-l... 421 1.8e-39 1
TAIR|locus:2028804 - symbol:CIB5 "AT1G26260" species:3702... 382 5.1e-39 2
UNIPROTKB|Q5VR96 - symbol:P0038C05.31-1 "Os06g0275600 pro... 413 1.3e-38 1
TAIR|locus:2205420 - symbol:AT1G68920 species:3702 "Arabi... 408 4.3e-38 1
UNIPROTKB|Q84LH4 - symbol:OSJNBb0011H13.2 "Putative Helix... 397 6.3e-37 1
UNIPROTKB|Q6ZCV8 - symbol:P0028A08.20 "Os08g0487700 prote... 396 8.0e-37 1
UNIPROTKB|Q75M33 - symbol:P0668H12.5 "BHLH transcription ... 354 1.5e-35 2
TAIR|locus:2139484 - symbol:CIB1 "AT4G34530" species:3702... 382 2.4e-35 1
TAIR|locus:2202867 - symbol:BPEp "AT1G59640" species:3702... 366 1.2e-33 1
UNIPROTKB|Q6Z2G7 - symbol:P0680A05.9 "Putative bHLH trans... 342 1.5e-33 2
TAIR|locus:2115200 - symbol:BEE2 "AT4G36540" species:3702... 357 1.1e-32 1
UNIPROTKB|Q84T08 - symbol:OSJNBa0087C10.10 "BHLH transcri... 351 4.7e-32 1
TAIR|locus:505006688 - symbol:AT5G50915 "AT5G50915" speci... 351 4.7e-32 1
TAIR|locus:2172209 - symbol:AT5G62610 "AT5G62610" species... 351 4.7e-32 1
TAIR|locus:2053766 - symbol:AT2G42300 "AT2G42300" species... 348 9.8e-32 1
UNIPROTKB|Q8GZV6 - symbol:OJ1017C11.10 "Putative uncharac... 349 7.0e-31 1
UNIPROTKB|Q69WS3 - symbol:OJ1118_E12.15 "Putative bHLH pr... 326 2.1e-29 1
TAIR|locus:2027809 - symbol:BEE3 "AT1G73830" species:3702... 298 2.5e-29 2
TAIR|locus:2032990 - symbol:CES "AT1G25330" species:3702 ... 300 7.5e-29 2
TAIR|locus:2014144 - symbol:BEE1 "BR enhanced expression ... 295 7.4e-26 1
TAIR|locus:2076581 - symbol:AT3G57800 "AT3G57800" species... 197 2.3e-24 2
TAIR|locus:2147760 - symbol:LRL3 "AT5G58010" species:3702... 224 6.4e-18 1
UNIPROTKB|Q7Y1H4 - symbol:OSJNBa0094F01.11 "Putative unch... 217 3.7e-17 1
UNIPROTKB|Q6Z7E7 - symbol:P0020C11.18 "Putative bHLH tran... 225 7.4e-17 2
TAIR|locus:2126624 - symbol:LRL2 "AT4G30980" species:3702... 221 1.4e-16 1
TAIR|locus:2047555 - symbol:LRL1 "AT2G24260" species:3702... 223 3.8e-16 1
TAIR|locus:2132303 - symbol:UNE12 "AT4G02590" species:370... 210 5.4e-15 1
UNIPROTKB|Q69Y51 - symbol:P0698A06.26-2 "Putative bHLH tr... 214 8.7e-15 1
UNIPROTKB|Q6EPZ6 - symbol:P0014G10.34 "BHLH transcription... 214 1.6e-14 1
TAIR|locus:2007534 - symbol:AT1G03040 "AT1G03040" species... 205 1.8e-14 1
UNIPROTKB|Q6Z1F9 - symbol:OSJNBa0033D24.39 "BHLH transcri... 189 4.2e-14 1
UNIPROTKB|Q69WX7 - symbol:P0417G12.19 "Basic helix-loop-h... 188 5.5e-14 1
UNIPROTKB|Q8S490 - symbol:rau1 "Transcription factor RAU1... 165 1.7e-11 1
TAIR|locus:2077680 - symbol:PIL6 "AT3G59060" species:3702... 178 6.2e-11 2
UNIPROTKB|Q6K8Y4 - symbol:OJ1695_H09.18 "Basic helix-loop... 149 8.8e-11 2
TAIR|locus:2061634 - symbol:PIL5 "phytochrome interacting... 180 9.5e-11 1
TAIR|locus:4010713916 - symbol:AT4G28815 species:3702 "Ar... 174 1.3e-10 1
UNIPROTKB|Q7FA23 - symbol:OSJNBa0058K23.6 "Os04g0618600 p... 155 2.1e-10 1
TAIR|locus:2141573 - symbol:FBH2 "AT4G09180" species:3702... 168 2.8e-10 1
TAIR|locus:4010713915 - symbol:AT4G28811 species:3702 "Ar... 176 3.4e-10 1
TAIR|locus:2012345 - symbol:PIF3 "AT1G09530" species:3702... 174 5.2e-10 1
TAIR|locus:2008693 - symbol:FBH1 "AT1G35460" species:3702... 165 6.0e-10 1
UNIPROTKB|Q5VRS4 - symbol:OSJNBa0015I14.14 "Basic helix-l... 167 9.2e-10 1
TAIR|locus:2117788 - symbol:AT4G28800 species:3702 "Arabi... 169 1.4e-09 1
TAIR|locus:2059979 - symbol:FBH4 "AT2G42280" species:3702... 167 1.4e-09 1
TAIR|locus:2026037 - symbol:FBH3 "AT1G51140" species:3702... 167 1.6e-09 1
UNIPROTKB|Q5NAE0 - symbol:P0498A12.33 "Putative BP-5 prot... 168 1.6e-09 2
TAIR|locus:2117773 - symbol:AT4G28790 species:3702 "Arabi... 165 3.2e-09 1
TAIR|locus:2053733 - symbol:PIF4 "AT2G43010" species:3702... 165 3.5e-09 1
UNIPROTKB|Q948F6 - symbol:OSJNBa0049O12.18 "Putative SPAT... 160 4.9e-09 1
UNIPROTKB|Q8GRJ1 - symbol:OJ1343_B12.103 "Transcription f... 164 9.9e-09 2
UNIPROTKB|Q2QMV9 - symbol:LOC_Os12g39850 "Helix-loop-heli... 157 1.2e-08 1
TAIR|locus:2155503 - symbol:ALC "AT5G67110" species:3702 ... 147 1.5e-08 1
TAIR|locus:2115080 - symbol:SPT "AT4G36930" species:3702 ... 158 1.6e-08 1
TAIR|locus:2041369 - symbol:PIL1 "phytochrome interacting... 157 2.6e-08 1
TAIR|locus:2126876 - symbol:UNE10 "AT4G00050" species:370... 156 3.0e-08 1
TAIR|locus:2199221 - symbol:RSL4 "AT1G27740" species:3702... 149 5.2e-08 1
TAIR|locus:2118934 - symbol:RSL2 "AT4G33880" species:3702... 149 1.5e-07 2
UNIPROTKB|Q7XT55 - symbol:OSJNBa0084K20.3 "OSJNBa0076N16.... 141 1.8e-07 1
UNIPROTKB|Q6Z9R3 - symbol:P0461F06.33 "BHLH protein famil... 141 3.7e-07 1
UNIPROTKB|Q2QMM0 - symbol:LOC_Os12g40710 "Helix-loop-heli... 141 5.7e-07 2
TAIR|locus:2074865 - symbol:HEC2 "AT3G50330" species:3702... 132 8.1e-07 2
TAIR|locus:505006103 - symbol:AT1G05805 "AT1G05805" speci... 142 9.0e-07 1
TAIR|locus:504954900 - symbol:AT5G43175 "AT5G43175" speci... 134 1.6e-06 1
UNIPROTKB|Q67TR8 - symbol:B1342C04.6 "Basic helix-loop-he... 134 2.1e-06 1
TAIR|locus:2144791 - symbol:HEC3 "AT5G09750" species:3702... 133 2.1e-06 1
UNIPROTKB|Q9ASJ3 - symbol:P0439B06.24 "Putative uncharact... 136 2.6e-06 1
UNIPROTKB|Q2QMN2 - symbol:LOC_Os12g40590 "Helix-loop-heli... 134 3.2e-06 1
TAIR|locus:2163163 - symbol:PIF7 "AT5G61270" species:3702... 139 4.0e-06 2
TAIR|locus:2155543 - symbol:HEC1 "HECATE 1" species:3702 ... 131 5.2e-06 1
UNIPROTKB|Q94LR3 - symbol:OSJNBa0010C11.7 "Helix-loop-hel... 126 5.7e-06 1
UNIPROTKB|Q6AV35 - symbol:OSJNBa0063J18.7 "Putative trans... 133 6.4e-06 1
UNIPROTKB|Q2R0R9 - symbol:LOC_Os11g41640 "Helix-loop-heli... 129 9.6e-06 1
UNIPROTKB|Q8W5G3 - symbol:OSJNBa0002J24.23 "Helix-loop-he... 120 1.7e-05 2
UNIPROTKB|Q69TX2 - symbol:P0021C04.13 "BHLH protein-like"... 123 2.6e-05 1
TAIR|locus:504954829 - symbol:GL3 "AT5G41315" species:370... 132 2.9e-05 1
TAIR|locus:2089418 - symbol:AT3G21330 "AT3G21330" species... 127 4.4e-05 1
UNIPROTKB|Q8S0N2 - symbol:P0692C11.41-1 "BHLH transcripti... 127 4.9e-05 1
TAIR|locus:2028957 - symbol:RHD6 "AT1G66470" species:3702... 124 6.0e-05 1
TAIR|locus:2026629 - symbol:EGL3 "AT1G63650" species:3702... 127 9.4e-05 1
UNIPROTKB|Q6ZFY4 - symbol:OJ1311_H06.19 "BHLH protein-lik... 122 0.00010 1
TAIR|locus:2156015 - symbol:RSL1 "AT5G37800" species:3702... 122 0.00016 2
UNIPROTKB|Q5TKP7 - symbol:OJ1362_G11.11 "Putative unchara... 124 0.00018 2
UNIPROTKB|Q2QML8 - symbol:LOC_Os12g40730 "Helix-loop-heli... 114 0.00028 2
TAIR|locus:2204898 - symbol:HFR1 "AT1G02340" species:3702... 110 0.00037 2
RGD|3092 - symbol:Mitf "microphthalmia-associated transcr... 97 0.00038 1
UNIPROTKB|O88368 - symbol:Mitf "Microphthalmia-associated... 97 0.00038 1
UNIPROTKB|Q657D1 - symbol:P0697C12.40 "BHLH transcription... 120 0.00041 1
TAIR|locus:2126856 - symbol:IND "AT4G00120" species:3702 ... 111 0.00056 1
TAIR|locus:2179122 - symbol:APTX "APRATAXIN-like" species... 121 0.00074 1
UNIPROTKB|Q651K2 - symbol:B1089G05.30 "BHLH protein-like"... 114 0.00078 1
>TAIR|locus:2079676 [details] [associations]
symbol:AT3G07340 "AT3G07340" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000238007 EMBL:AC009853 EMBL:AK175369 EMBL:AK175496
EMBL:AK176563 EMBL:AK176663 EMBL:BT026497 EMBL:AF488595
IPI:IPI00521004 RefSeq:NP_187390.1 UniGene:At.40357
ProteinModelPortal:Q9SRT2 SMR:Q9SRT2 EnsemblPlants:AT3G07340.1
GeneID:819922 KEGG:ath:AT3G07340 GeneFarm:2908 TAIR:At3g07340
eggNOG:NOG283912 InParanoid:Q9SRT2 OMA:MENELFM PhylomeDB:Q9SRT2
ProtClustDB:CLSN2684837 Genevestigator:Q9SRT2 Uniprot:Q9SRT2
Length = 456
Score = 601 (216.6 bits), Expect = 1.3e-80, Sum P(4) = 1.3e-80
Identities = 130/211 (61%), Positives = 153/211 (72%)
Query: 346 YIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSL 405
YIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSL
Sbjct: 255 YIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSL 314
Query: 406 QRQVEFLSMKLASVNTRLELNVDALMSKDIYQPNKPLPH--SIFQIDSSASAFFSHQPQQ 463
QRQVEFLSMKL+SVNTRL+ N+DAL+SKDI+ + L H + Q+DSSA +
Sbjct: 315 QRQVEFLSMKLSSVNTRLDFNMDALLSKDIFPSSNNLMHHQQVLQLDSSAETLLGDHHNK 374
Query: 464 NPALHGNISNGTMTQCPVDPLDNALCRNLSMQLPQLEQFTETIPQFQNFGEDDLQSIVQM 523
N L+ +IS+ + ++PL+ + R+ LP L FT++I Q+ F EDDL SI+ M
Sbjct: 375 NLQLNPDISSNNV----INPLETSETRSFISHLPTLAHFTDSISQYSTFSEDDLHSIIHM 430
Query: 524 GFGQNPNSETSLQSQSFHGSNQAP-HMKAEL 553
GF QN LQ + SNQ P HMKAEL
Sbjct: 431 GFAQN-----RLQELNQGSSNQVPSHMKAEL 456
Score = 102 (41.0 bits), Expect = 1.3e-80, Sum P(4) = 1.3e-80
Identities = 35/108 (32%), Positives = 45/108 (41%)
Query: 1 MENEFFLNAGIPAPVAMPIWPSAAMEIQIQATNEMMNCSSEQSSDCFFNPNNWEKSTDHS 60
MENE F+NAG+ P M PS++ + + E S + F WEKST+ S
Sbjct: 1 MENELFMNAGVSHPPVMTS-PSSSSAMLKWVSMETQPVDPSLSRNLF-----WEKSTEQS 54
Query: 61 LQFDXXXXXXXXXXXXXXXXXXXXXXXX-----RELIGKLGNIGNNSG 103
+ FD RELIGKLGNIG+ G
Sbjct: 55 I-FDSALSSLVSSPTPSNSNFSVGGVGGENVIMRELIGKLGNIGDIYG 101
Score = 89 (36.4 bits), Expect = 1.3e-80, Sum P(4) = 1.3e-80
Identities = 21/36 (58%), Positives = 23/36 (63%)
Query: 207 NNNPNPMTANEKLPRVSSSPSLKVLGSQAQATGNKS 242
NN P P+T NEK+PRVSSSP K L S A G S
Sbjct: 167 NNEP-PITTNEKMPRVSSSPVFKPLASHVPA-GESS 200
Score = 58 (25.5 bits), Expect = 1.3e-80, Sum P(4) = 1.3e-80
Identities = 21/51 (41%), Positives = 26/51 (50%)
Query: 268 SRKRKAVSKGKGKETAASPSVNNTTKVAEANASESSKNKRCKPNEGKANGN 318
SRKRK SK SPS +++K E E S KRCK +E NG+
Sbjct: 204 SRKRKTKSKQN------SPSAVSSSK--EIEEKEDSDPKRCKKSE--ENGD 244
>TAIR|locus:2152551 [details] [associations]
symbol:AT5G48560 "AT5G48560" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0016132 "brassinosteroid biosynthetic process" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AB015468 Gene3D:4.10.280.10
SUPFAM:SSF47459 HOGENOM:HOG000238007 eggNOG:NOG283912
ProtClustDB:CLSN2684837 EMBL:AF488610 EMBL:BT002945 EMBL:BT005637
IPI:IPI00543091 RefSeq:NP_199667.1 UniGene:At.43769
ProteinModelPortal:Q9FJL4 SMR:Q9FJL4 IntAct:Q9FJL4 PaxDb:Q9FJL4
PRIDE:Q9FJL4 EnsemblPlants:AT5G48560.1 GeneID:834912
KEGG:ath:AT5G48560 TAIR:At5g48560 InParanoid:Q9FJL4 OMA:SASCYAT
PhylomeDB:Q9FJL4 Genevestigator:Q9FJL4 Uniprot:Q9FJL4
Length = 498
Score = 615 (221.5 bits), Expect = 2.9e-72, Sum P(2) = 2.9e-72
Identities = 153/279 (54%), Positives = 179/279 (64%)
Query: 268 SRKRKAVSKGKGKE---TAASPSVNNTTKVAEANASESSKNKRCKPNEGKANGNGAVKAE 324
SRKRK+V KGK KE + ASPS + +K AE N + +K + GK E
Sbjct: 219 SRKRKSVPKGKSKENPISTASPSPS-FSKTAEKNGGKGG-SKSSEEKGGKRRREEEDDEE 276
Query: 325 DEGXXXXXXXXXXXXXXXXXXYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPG 384
+EG YIHVRARRGQATDSHSLAERVRREKI ERMKLLQDLVPG
Sbjct: 277 EEGEGEGNKSNNTKPPEPPKDYIHVRARRGQATDSHSLAERVRREKIGERMKLLQDLVPG 336
Query: 385 CNKVTGKALMLDEIINYVQSLQRQVEFLSMKLASVN-TRLELNVDALMSKDIYQP--NKP 441
CNKVTGKALMLDEIINYVQSLQRQVEFLSMKL+SVN TRL+ NVDAL+SKD+ P N
Sbjct: 337 CNKVTGKALMLDEIINYVQSLQRQVEFLSMKLSSVNDTRLDFNVDALVSKDVMIPSSNNR 396
Query: 442 LPHSIFQIDSSASAFFSHQPQ-----QNPALHGNIS-NGTMTQCPVDPLDNA-LCRNLSM 494
L Q SS+ HQ Q N L NIS N M Q P++ L+ + L R+ +
Sbjct: 397 LHEEGLQSKSSSH---HHQQQLNIYNNNSQLLPNISSNNMMLQSPMNSLETSTLARSFT- 452
Query: 495 QLPQLEQFTETIPQFQNFGEDDLQSIVQMGFGQNPNSET 533
LP L QFT++I Q+Q F E+DLQSIV MG +NPN+E+
Sbjct: 453 HLPTLTQFTDSISQYQMFSEEDLQSIVGMGVAENPNNES 491
Score = 134 (52.2 bits), Expect = 2.9e-72, Sum P(2) = 2.9e-72
Identities = 57/180 (31%), Positives = 74/180 (41%)
Query: 1 MENEFFLNAGIPAPVAMPIWPSAAMEIQIQATNEMM-NCSSEQSSDCFFNPNNWEKSTDH 59
M+NE F+N P P M + E Q +++ MM N + + + WEKST+
Sbjct: 1 MDNELFMNTEFPPPPEM----ATHFEHQQSSSSAMMLNWALMDPNPHQDSSFLWEKSTEQ 56
Query: 60 SLQ---FDXXXXXXXXX---XXXXXXXXXXXXXXXRELIGKLGNIGNNSG-AGEI--TPH 110
Q FD RELIGKLGNIGNN+ +GEI TP
Sbjct: 57 QQQQSIFDSALSSLVSSPTPSNSNFSGGGGDGFLIRELIGKLGNIGNNNNNSGEIYGTPM 116
Query: 111 SLAPYIXXXXXXXXXXXXXXXXCYTTPLNSPP---KLNLPMSLGNSMPLNSSVAEFSADP 167
S + CY TP++SPP N M + + PL EFSADP
Sbjct: 117 SRS-----------------ASCYATPMSSPPPPTNSNSQMMMNRTTPLT----EFSADP 155
>UNIPROTKB|Q5N802 [details] [associations]
symbol:P0004D12.24 "BHLH transcription factor"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AP008207 eggNOG:NOG283912 EMBL:AP003433 EMBL:HQ858864
EMBL:AK101063 RefSeq:NP_001045188.1 UniGene:Os.5763
EnsemblPlants:LOC_Os01g68700.2 GeneID:4324327 KEGG:osa:4324327
ProtClustDB:CLSN2692207 Uniprot:Q5N802
Length = 481
Score = 621 (223.7 bits), Expect = 6.8e-65, Sum P(2) = 6.8e-65
Identities = 142/292 (48%), Positives = 179/292 (61%)
Query: 264 NDFNSRKRKAVSKGKGKETAASPSVNNTTKVAEANASESSKNKRCKPNEGKANGNGAVKA 323
+D N+RKRKA KGKGK++ S S + S N + N GK + +
Sbjct: 193 SDGNARKRKASGKGKGKDSPMSTSAAKEDSSGKRCKSTEESNAAAEENSGKGKAAQS-NS 251
Query: 324 EDEGXXXXXXXXXXXXXXXXXXYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVP 383
E+ G YIHVRARRG+ATDSHSLAERVRREKIS+RMKLLQDLVP
Sbjct: 252 ENGGGKKQGKDSSSKPPEPPKDYIHVRARRGEATDSHSLAERVRREKISQRMKLLQDLVP 311
Query: 384 GCNKVTGKALMLDEIINYVQSLQRQVEFLSMKLASVNTRLELN-VDALMSKDIYQPNKPL 442
GCNKV GKA+MLDEIINYVQSLQRQVEFLSMKLA+VN +L+ N + L++KD++Q PL
Sbjct: 312 GCNKVVGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPQLDFNNLPNLLAKDMHQSCSPL 371
Query: 443 PHSIFQIDSSASAF-FSHQPQQNPALHGNISNGTMTQCPVDPLDNALCRNLSMQLPQLEQ 501
S F +++S + + +QPQQ L ++NG Q + PLD A CR + P L
Sbjct: 372 QSSHFPLETSGAPLPYINQPQQGNPLGCGLTNGMDNQGSMHPLDPAFCRPMGSHHPFLNG 431
Query: 502 FTETIPQFQNFGEDDLQSIVQMGFGQNPNSETSLQSQSFHGSNQAPHMKAEL 553
++ Q F +DDLQS+VQM GQ+ TS S S++GS Q HMK EL
Sbjct: 432 VSDAASQVGAFWQDDLQSVVQMDMGQSQEIATS--SNSYNGSLQTVHMKMEL 481
Score = 58 (25.5 bits), Expect = 6.8e-65, Sum P(2) = 6.8e-65
Identities = 11/13 (84%), Positives = 12/13 (92%)
Query: 136 TPLNSPPKLNLPM 148
TPL+SPPKLNL M
Sbjct: 67 TPLSSPPKLNLSM 79
>UNIPROTKB|Q84QW1 [details] [associations]
symbol:OJ1191_A10.109 "BHLH transcription
factor(GBOF-1)-like" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 EMBL:AP008214
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AP003888
RefSeq:NP_001062289.1 UniGene:Os.10830
EnsemblPlants:LOC_Os08g41320.1 GeneID:4346087 KEGG:osa:4346087
eggNOG:NOG320619 OMA:ERISQRM ProtClustDB:CLSN2697487 Uniprot:Q84QW1
Length = 405
Score = 533 (192.7 bits), Expect = 2.4e-51, P = 2.4e-51
Identities = 131/293 (44%), Positives = 166/293 (56%)
Query: 267 NSRKRK------AVSKGKGKETAASPSVNNTTKVAEANASESSKNKRCKPNEGKANGNGA 320
N++KRK A +KGKGKE + K + E K KP +A + +
Sbjct: 118 NAKKRKSTAAAAAAAKGKGKEPPVGEEKESDGKRCKTGNGE--KESSVKPKAEQAGSDSS 175
Query: 321 VKAEDEGXXXXXXXXXXXXXXXXXXYIHVRARRGQATDSHSLAERVRREKISERMKLLQD 380
V+ G Y+HVRARRGQATDSHSLAERVRRE+IS+RMK+LQD
Sbjct: 176 VEDGGGGGQKQGKGKNAKPVEPPKDYVHVRARRGQATDSHSLAERVRRERISQRMKVLQD 235
Query: 381 LVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMKLASVNTRLELNVDALMSKDIYQPNK 440
LVPGCNKV GKALMLDEIINYVQSLQRQVEFLSMKLA+VN N+ L+ KD++Q
Sbjct: 236 LVPGCNKVIGKALMLDEIINYVQSLQRQVEFLSMKLATVNPLDFSNLPTLLQKDMFQACG 295
Query: 441 PLPHSIFQIDSSASAFFSHQPQQNPALHGNISNGTMTQCPVDPLDNALCRNLSMQLPQLE 500
P S+F ++SS SAF +Q N +QC ++ LD AL + + +
Sbjct: 296 PSASSVFSLESSNSAF--RFAEQGDVFQQFAQNSMESQCTLNQLDLALSQATNAAQYAFQ 353
Query: 501 QFTETIP-QFQNFGEDDLQSIVQMGFGQNPNSETSLQSQSFHGSNQAPHMKAE 552
T Q +NF EDDLQS+ + GQ+ E + + +FHG QA HMK E
Sbjct: 354 DGTAGANLQQRNFWEDDLQSVFHIENGQS--QENGVSAPNFHGQQQAGHMKME 404
>TAIR|locus:2095198 [details] [associations]
symbol:AT3G23690 "AT3G23690" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003677
EMBL:AP000377 GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10
SUPFAM:SSF47459 HOGENOM:HOG000238007 EMBL:AY065441 EMBL:AY096536
EMBL:EU550216 EMBL:EU550217 EMBL:EU550218 EMBL:EU550219
EMBL:EU550220 EMBL:EU550221 EMBL:EU550222 EMBL:EU550223
EMBL:EU550224 EMBL:EU550225 EMBL:EU550226 EMBL:EU550227
EMBL:EU550228 EMBL:EU550229 EMBL:EU550230 EMBL:EU550231
EMBL:EU550232 EMBL:EU550233 EMBL:EU550234 EMBL:EU550235
EMBL:EU550236 EMBL:EU550237 EMBL:EU550238 EMBL:EU550239
EMBL:AF488609 IPI:IPI00545445 RefSeq:NP_189011.2 UniGene:At.6666
ProteinModelPortal:Q9LK48 SMR:Q9LK48 PaxDb:Q9LK48 PRIDE:Q9LK48
EnsemblPlants:AT3G23690.1 GeneID:821950 KEGG:ath:AT3G23690
TAIR:At3g23690 eggNOG:NOG292697 InParanoid:Q9LK48 OMA:MEFNANA
PhylomeDB:Q9LK48 ProtClustDB:CLSN2917952 Genevestigator:Q9LK48
Uniprot:Q9LK48
Length = 371
Score = 474 (171.9 bits), Expect = 1.8e-50, Sum P(2) = 1.8e-50
Identities = 106/197 (53%), Positives = 133/197 (67%)
Query: 267 NSRKRKAVSKGKGKETAASPSVN-NTTKVAEANASESSKNKRCKPNEGKANGNGAVKAED 325
NSRKRK++ G GKE+ AS S+ + +KV+ N S KR K + ++ NG K +
Sbjct: 113 NSRKRKSIPSGNGKESPASSSLTASNSKVSGENGG-SKGGKRSKQDVAGSSKNGVEKCDS 171
Query: 326 EGXXXXXXXXXXXXXXXXXXYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGC 385
+G YIHVRARRGQATDSHSLAER RREKISERM LLQDLVPGC
Sbjct: 172 KGDNKDDAKPPEAPKD----YIHVRARRGQATDSHSLAERARREKISERMTLLQDLVPGC 227
Query: 386 NKVTGKALMLDEIINYVQSLQRQVEFLSMKLASVNTRLELNVDALMSKDIYQPNKPLPHS 445
N++TGKA+MLDEIINYVQSLQRQVEFLSMKLA+VN R+E N +A +S ++ QP + L S
Sbjct: 228 NRITGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRMEFNANASLSTEMIQPGESLTQS 287
Query: 446 IFQIDSSA----SAFFS 458
++ + S SA++S
Sbjct: 288 LYAMACSEQRLPSAYYS 304
Score = 68 (29.0 bits), Expect = 1.8e-50, Sum P(2) = 1.8e-50
Identities = 24/62 (38%), Positives = 32/62 (51%)
Query: 495 QLPQLEQFTET-IPQFQNFGEDDLQSIVQMGFGQNPNSETSLQSQSFHGSNQA--PHMKA 551
Q P + F T P F + +DLQSIVQMGFG LQ QS + +N P ++
Sbjct: 316 QFPSNDGFVHTETPGF--WENNDLQSIVQMGFGD------ILQQQSNNNNNNCSEPTLQM 367
Query: 552 EL 553
+L
Sbjct: 368 KL 369
>TAIR|locus:2201906 [details] [associations]
symbol:AT1G10120 "AT1G10120" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AC004122 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:BT012655 EMBL:AK221806 EMBL:AK229309
EMBL:AK230347 EMBL:AF488606 IPI:IPI00541831 PIR:T00632
RefSeq:NP_172483.4 UniGene:At.43391 UniGene:At.69296
ProteinModelPortal:Q6NKN9 SMR:Q6NKN9 EnsemblPlants:AT1G10120.1
GeneID:837549 KEGG:ath:AT1G10120 TAIR:At1g10120 eggNOG:NOG271189
HOGENOM:HOG000090626 InParanoid:Q6NKN9 OMA:GESSHED PhylomeDB:Q6NKN9
ProtClustDB:CLSN2681496 Genevestigator:Q6NKN9 Uniprot:Q6NKN9
Length = 366
Score = 381 (139.2 bits), Expect = 1.2e-39, Sum P(2) = 1.2e-39
Identities = 82/128 (64%), Positives = 102/128 (79%)
Query: 346 YIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSL 405
YIH+RARRGQAT+SHSLAERVRREKISERM+LLQ+LVPGCNK+TGKA+MLDEIINYVQSL
Sbjct: 203 YIHMRARRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSL 262
Query: 406 QRQVEFLSMKLASVNTRLELNVDALMSKDIYQP---NKPL----PHSIFQID-SSASAFF 457
Q+QVEFLSMKLA+VN + +++D +++KD+ Q N P P + FQ + + SA
Sbjct: 263 QQQVEFLSMKLATVNPEINIDIDRILAKDLLQSRDRNTPTLGLNPFAGFQGNIPNLSA-- 320
Query: 458 SHQPQQNP 465
+ PQ NP
Sbjct: 321 TTNPQYNP 328
Score = 58 (25.5 bits), Expect = 1.2e-39, Sum P(2) = 1.2e-39
Identities = 16/43 (37%), Positives = 24/43 (55%)
Query: 496 LPQLEQFTETIPQF----QNFGEDDLQSIVQMGFGQNPNSETS 534
+P L T PQ+ Q E +LQ++ QMGF NP++ +S
Sbjct: 315 IPNLSATTN--PQYNPLPQTTLESELQNLYQMGFVSNPSTMSS 355
>UNIPROTKB|Q69JJ6 [details] [associations]
symbol:OSJNBa0026C08.22 "TA1 protein-like" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AP008215
ProtClustDB:CLSN2697804 EMBL:AP006169 EMBL:HQ858863 EMBL:AK121418
RefSeq:NP_001063455.1 UniGene:Os.38400
EnsemblPlants:LOC_Os09g29830.3 GeneID:4347355 KEGG:osa:4347355
Uniprot:Q69JJ6
Length = 428
Score = 421 (153.3 bits), Expect = 1.8e-39, P = 1.8e-39
Identities = 94/169 (55%), Positives = 111/169 (65%)
Query: 275 SKGKGKETAASPS-VNNTTKVAEANASESSKNKRCKPNEGKANGNGAVKAEDEGXXXXXX 333
SKG + P+ V T +V +N S N+ K G + A G
Sbjct: 176 SKGSDSKKRRRPNEVMGTDQVHSSNLPSDSANESV---HSKDKGEESSPATTNGGKSKGK 232
Query: 334 XXXXXXXXXXXXYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKAL 393
YIHVRARRGQAT+SHSLAER+RREKISERMKLLQDLVPGC+KVTGKA+
Sbjct: 233 GAKETSESQKEEYIHVRARRGQATNSHSLAERLRREKISERMKLLQDLVPGCSKVTGKAV 292
Query: 394 MLDEIINYVQSLQRQVEFLSMKLASVNTRLELNVDALMSKDIYQ-PNKP 441
MLDEIINYVQSLQRQVEFLSMKLA+VN RL+LN++ L+SKD+ + P P
Sbjct: 293 MLDEIINYVQSLQRQVEFLSMKLATVNPRLDLNIEGLLSKDLLRFPGVP 341
>TAIR|locus:2028804 [details] [associations]
symbol:CIB5 "AT1G26260" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0009911 "positive regulation of flower development"
evidence=IGI] [GO:0048513 "organ development" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AC079829 GO:GO:0009911
Gene3D:4.10.280.10 SUPFAM:SSF47459 HOGENOM:HOG000238007
EMBL:AK117355 EMBL:BT005334 EMBL:AJ630483 EMBL:AY568655
EMBL:AF488608 IPI:IPI00529982 IPI:IPI00547855 PIR:H86388
RefSeq:NP_001031093.1 RefSeq:NP_173950.1 RefSeq:NP_973913.1
UniGene:At.41276 ProteinModelPortal:Q9C670 SMR:Q9C670 IntAct:Q9C670
STRING:Q9C670 EnsemblPlants:AT1G26260.1 EnsemblPlants:AT1G26260.2
GeneID:839167 KEGG:ath:AT1G26260 TAIR:At1g26260 eggNOG:NOG284637
InParanoid:Q9C670 OMA:ETHGYES PhylomeDB:Q9C670
ProtClustDB:CLSN2682645 Genevestigator:Q9C670 Uniprot:Q9C670
Length = 390
Score = 382 (139.5 bits), Expect = 5.1e-39, Sum P(2) = 5.1e-39
Identities = 75/102 (73%), Positives = 91/102 (89%)
Query: 346 YIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSL 405
YIH+RARRGQAT+SHSLAERVRREKISERMK LQDLVPGC+KVTGKA+MLDEIINYVQSL
Sbjct: 220 YIHMRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCDKVTGKAVMLDEIINYVQSL 279
Query: 406 QRQVEFLSMKLASVNTRLELNVDALMSKDIYQPNKP-LPHSI 446
Q Q+EFLSMKL++VN L+ N+++L++KD Q + P PH++
Sbjct: 280 QCQIEFLSMKLSAVNPVLDFNLESLLAKDALQSSAPTFPHNM 321
Score = 51 (23.0 bits), Expect = 5.1e-39, Sum P(2) = 5.1e-39
Identities = 25/114 (21%), Positives = 45/114 (39%)
Query: 198 PDQFGLSRSNNNPNPMTANEKLPRVSSSPSLKVLGSQAQATGNKSPQDRSELANXXXXXX 257
PD GL + + + KL + + K++ + ++ N S +S N
Sbjct: 110 PDSTGLFLQDTQ---IPSGSKLDNGPLTDASKLV--KERSINNVSEDSQSSGGNGHDDAK 164
Query: 258 XXXXXPNDFNSRKRKAVSKG------KGKETAASPSVNNTTKVAEANASESSKN 305
F+S+KRK + K K ++ SP+ N +E S+S K+
Sbjct: 165 CGQTSSKGFSSKKRKRIGKDCEEEEDKKQKDEQSPTSNANKTNSEKQPSDSLKD 218
>UNIPROTKB|Q5VR96 [details] [associations]
symbol:P0038C05.31-1 "Os06g0275600 protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:AP008212 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AP003044 RefSeq:NP_001057380.1 UniGene:Os.32526
EnsemblPlants:LOC_Os06g16400.1 EnsemblPlants:LOC_Os06g16400.2
GeneID:4340749 KEGG:osa:4340749 ProtClustDB:CLSN2697804
Uniprot:Q5VR96
Length = 437
Score = 413 (150.4 bits), Expect = 1.3e-38, P = 1.3e-38
Identities = 115/261 (44%), Positives = 146/261 (55%)
Query: 268 SRKRKAVSKGKGKETAASPSVNNTTKVAEANAS-ESSKNKRCKPNEGKANGNGAVKAEDE 326
S+KRK + G + A T A+ N E + KR GK++G +K ++
Sbjct: 193 SKKRKRSGQDGGVKHAEGGEQLATVGSAQKNEDDEKGEPKRSSVASGKSSGK-QIK-DNA 250
Query: 327 GXXXXXXXXXXXXXXXXXXYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCN 386
G YIHVRARRGQAT+SHSLAERVRREKISERMK LQDLVPGC+
Sbjct: 251 GSPKED-------------YIHVRARRGQATNSHSLAERVRREKISERMKYLQDLVPGCS 297
Query: 387 KVTGKALMLDEIINYVQSLQRQVEFLSMKLASVNTRLELNVDALMSKDIYQPNKPLPHSI 446
KVTGKA+MLDEIINYVQSLQRQVEFLSMKLASVN L+ N++ ++SKDI+Q
Sbjct: 298 KVTGKAVMLDEIINYVQSLQRQVEFLSMKLASVNPTLDFNIERILSKDIFQCRGTTA--- 354
Query: 447 FQIDSSASAFFSH--QPQQNPALHGNISNGTMTQCPVDPLDNALCRNLSMQLPQLEQFTE 504
SSA FF P+ +P + + ++ V+P D A R + L F E
Sbjct: 355 ----SSAFGFFPDIVHPRLHPPKYTQVGMPSI----VNPTD-AFGRVIHAPLGTNSAFKE 405
Query: 505 TIPQFQNFGEDDLQSIVQMGF 525
Q N + Q +++M F
Sbjct: 406 PKHQMPNNLNGEFQDVIEMPF 426
>TAIR|locus:2205420 [details] [associations]
symbol:AT1G68920 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AC011665 EMBL:AF488584 EMBL:AY128299
EMBL:BT002259 IPI:IPI00536565 IPI:IPI00545990 PIR:G96713
RefSeq:NP_001031255.1 RefSeq:NP_177058.1 RefSeq:NP_849863.2
UniGene:At.28096 ProteinModelPortal:Q9CAA9 SMR:Q9CAA9 STRING:Q9CAA9
EnsemblPlants:AT1G68920.1 EnsemblPlants:AT1G68920.2 GeneID:843225
KEGG:ath:AT1G68920 TAIR:At1g68920 eggNOG:NOG301979
HOGENOM:HOG000238007 InParanoid:Q3E6P7 OMA:MLKGGIF PhylomeDB:Q9CAA9
ProtClustDB:CLSN2682343 Genevestigator:Q9CAA9 Uniprot:Q9CAA9
Length = 486
Score = 408 (148.7 bits), Expect = 4.3e-38, P = 4.3e-38
Identities = 111/257 (43%), Positives = 148/257 (57%)
Query: 278 KGKETAASPSVNNTTKVAEANASESSKNKRCKPNEGKANGNGAVKAEDE------GXXXX 331
KG+ET S + + + N SE++++ R + +E + + NG K DE G
Sbjct: 227 KGRET--SSNTKKRKRNGQKN-SEAAQSHRSQQSEEEPDNNGDEKRNDEQSPNSPGKKSN 283
Query: 332 XXXXXXXXXXX--XXXYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVT 389
YIHVRARRGQAT+SHSLAERVRREKISERMK LQDLVPGCNKVT
Sbjct: 284 SGKQQGKQSSDPPKDGYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCNKVT 343
Query: 390 GKALMLDEIINYVQSLQRQVEFLSMKLASVNTRLELNVDALMSKDIYQPNKPLPHSIFQI 449
GKA+MLDEIINYVQSLQRQVEFLSMKLA+VN +++ N++ L++KD Q +
Sbjct: 344 GKAVMLDEIINYVQSLQRQVEFLSMKLATVNPQMDFNLEGLLAKDALQ---------LRA 394
Query: 450 DSSASAFFSHQPQQNPALHGNISNGTMTQCPVDPLDNALCRNLSMQLPQLEQFTETIPQF 509
SS++ F P + A + + +G M Q + + + LS P F Q
Sbjct: 395 GSSSTTPFP--PNMSMA-YPPLPHGFMQQT-LSSIGRTITSPLS---PMNGGFKR---QE 444
Query: 510 QNFGEDDLQSIVQMGFG 526
N E DLQ+++ + +G
Sbjct: 445 TNGWEGDLQNVIHINYG 461
>UNIPROTKB|Q84LH4 [details] [associations]
symbol:OSJNBb0011H13.2 "Putative Helix-loop-helix
DNA-binding domain containing protein" species:39947 "Oryza sativa
Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 GO:GO:0003677 EMBL:DP000009 EMBL:AP008209
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:CM000140 EMBL:AC120983
EMBL:AC135956 RefSeq:NP_001051150.1 UniGene:Os.24540
EnsemblPlants:LOC_Os03g51910.1 GeneID:4333984 KEGG:osa:4333984
eggNOG:NOG262475 OMA:SKQMMLS ProtClustDB:CLSN2694257 Uniprot:Q84LH4
Length = 327
Score = 397 (144.8 bits), Expect = 6.3e-37, P = 6.3e-37
Identities = 87/167 (52%), Positives = 118/167 (70%)
Query: 346 YIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSL 405
Y+HVRA+RGQAT+SHSLAER+RR+KISERMKLLQDLVPGC+K+TGKA+MLDEIINYVQSL
Sbjct: 144 YVHVRAKRGQATNSHSLAERLRRKKISERMKLLQDLVPGCSKITGKAVMLDEIINYVQSL 203
Query: 406 QRQVEFLSMKLASVNTRLELNVDALMSKDIY-QPNKPLPHSIFQIDSSASAFFSHQPQ-- 462
QRQVEFLSMKLA+VN L +++ ++SK + ++ L + + +D +SA +H Q
Sbjct: 204 QRQVEFLSMKLATVNPELSFDIEQILSKQMMLSQDRHL--AFYGVDPGSSALVAHFNQGI 261
Query: 463 QNPALHGNISNGTMTQCPVDPLDNALCRNLSM--QLPQLEQFTETIP 507
P + N+SN P D L +++S Q+P + + + IP
Sbjct: 262 MQPEMLCNVSN------PADVLQGTTIQDISTVNQIPAMWEGLQNIP 302
>UNIPROTKB|Q6ZCV8 [details] [associations]
symbol:P0028A08.20 "Os08g0487700 protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:AP008214 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:CM000145 EMBL:AP004557 RefSeq:NP_001062102.1 UniGene:Os.60678
EnsemblPlants:LOC_Os08g38080.1 GeneID:4345892 KEGG:osa:4345892
eggNOG:NOG275480 Uniprot:Q6ZCV8
Length = 365
Score = 396 (144.5 bits), Expect = 8.0e-37, P = 8.0e-37
Identities = 114/274 (41%), Positives = 155/274 (56%)
Query: 276 KGKGKETAASPSVNNTTKVAEA-NASESSKNKRCKPNEGKANGNGAVKAEDEGXXXXXXX 334
K + E A + N + +A++ N +E SK+ G+ G A A G
Sbjct: 109 KRRSDEIAGTDHANASNALADSGNETECSKDVN-----GEVIGPPATAAA--GGKSKGKG 161
Query: 335 XXXXXXXXXXXYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALM 394
Y HVRAR+GQAT++HSLAER+RREKISERMKLLQDLVPGC+KVTGKALM
Sbjct: 162 AKDAGEAQKEGYSHVRARKGQATNNHSLAERLRREKISERMKLLQDLVPGCSKVTGKALM 221
Query: 395 LDEIINYVQSLQRQVEFLSMKLASVNTRLELNVDALM--SKDIYQ-PNKPLPHSIFQIDS 451
LDEIINYVQSLQRQVEFLSMKL++VN R++L++++L+ SKD+ + P +P S
Sbjct: 222 LDEIINYVQSLQRQVEFLSMKLSAVNPRIDLDIESLVNNSKDVLRFPGQP---------S 272
Query: 452 SASAFFSHQPQQNPALHGNISNGTMTQCPVDPLDNA-LCRNLSMQLPQLEQFTETIPQFQ 510
SA FS + P L +S + Q V + N + +L + Q ++ PQ
Sbjct: 273 SAPMGFSFSTEMMPGLQ--LSRPGILQGGVHGMINPDVFTSLMQKQQQNDKGAFREPQMH 330
Query: 511 NFGEDDLQSIVQMGFGQNPNSET-SL-QSQS-FH 541
+ ++ QM + Q +SE S+ Q Q FH
Sbjct: 331 QTLDGSFRNTAQMPYPQVMSSEELSIRQDQDGFH 364
>UNIPROTKB|Q75M33 [details] [associations]
symbol:P0668H12.5 "BHLH transcription factor" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:AP008211 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:CM000142 EMBL:AC084818 EMBL:AC073405 EMBL:HQ858853
EMBL:AK065864 RefSeq:NP_001054390.1 UniGene:Os.23082
EnsemblPlants:LOC_Os05g01256.1 EnsemblPlants:LOC_Os05g01256.2
GeneID:4337537 KEGG:osa:4337537 eggNOG:NOG296531 Uniprot:Q75M33
Length = 339
Score = 354 (129.7 bits), Expect = 1.5e-35, Sum P(2) = 1.5e-35
Identities = 74/104 (71%), Positives = 84/104 (80%)
Query: 346 YIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSL 405
YIHVRARRGQATDSHSLAERVRREKISERMK+LQ LVPGC+KVTGKALMLDEII+YVQSL
Sbjct: 177 YIHVRARRGQATDSHSLAERVRREKISERMKMLQSLVPGCDKVTGKALMLDEIISYVQSL 236
Query: 406 QRQVEFLSMKLASVNTRL-ELNVDALMSKDIYQPNKPLPHSIFQ 448
Q QVEFLSMKLAS++ + E M D+ + +PH + Q
Sbjct: 237 QNQVEFLSMKLASLSPLMYEFGPGIDMHPDVLRQLAKMPHEMVQ 280
Score = 46 (21.3 bits), Expect = 1.5e-35, Sum P(2) = 1.5e-35
Identities = 13/47 (27%), Positives = 23/47 (48%)
Query: 6 FLNAGIPAPVAMPIWPSAAMEIQIQATNEMMNCSSEQSSDCFFNPNN 52
FL+A P P+ +P +P+ ++ +A M E SS +P +
Sbjct: 29 FLSA--PEPLPVPGFPAGCSNLEEKAAAAMAAYEYESSSCSSLDPTS 73
>TAIR|locus:2139484 [details] [associations]
symbol:CIB1 "AT4G34530" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS;IDA] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS;IDA]
[GO:0006351 "transcription, DNA-dependent" evidence=IDA]
[GO:0009911 "positive regulation of flower development"
evidence=IMP] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 GO:GO:0009911
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AL161585 EMBL:AL023094
HOGENOM:HOG000238007 EMBL:AF488596 EMBL:AK117846 EMBL:AY120741
EMBL:BT005313 IPI:IPI00519970 PIR:T05273 RefSeq:NP_195179.2
UniGene:At.48937 ProteinModelPortal:Q8GY61 SMR:Q8GY61
DIP:DIP-59356N IntAct:Q8GY61 PRIDE:Q8GY61 EnsemblPlants:AT4G34530.1
GeneID:829604 KEGG:ath:AT4G34530 TAIR:At4g34530 eggNOG:NOG251551
InParanoid:Q8GY61 OMA:SGYSHEM PhylomeDB:Q8GY61
ProtClustDB:CLSN2915063 Genevestigator:Q8GY61 Uniprot:Q8GY61
Length = 335
Score = 382 (139.5 bits), Expect = 2.4e-35, P = 2.4e-35
Identities = 88/172 (51%), Positives = 108/172 (62%)
Query: 267 NSRKRKAVSKGKG-KETAASPSVNNTTKVAEANASESSKNKRCKPNEGKANGNGAVK--A 323
N +KRK ++ K E ++N V E E K+K + N G +K A
Sbjct: 90 NFKKRKFDTETKDCNEKKKKMTMNRDDLVEEG---EEEKSKITEQNNGSTKSIKKMKHKA 146
Query: 324 EDEGXXXXXXXXXXXXXXXXXXYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVP 383
+ E YIHVRARRGQATDSHS+AERVRREKISERMK LQDLVP
Sbjct: 147 KKEENNFSNDSSKVTKELEKTDYIHVRARRGQATDSHSIAERVRREKISERMKFLQDLVP 206
Query: 384 GCNKVTGKALMLDEIINYVQSLQRQVEFLSMKLASVNTRLELNVDALMSKDI 435
GC+K+TGKA MLDEIINYVQSLQRQ+EFLSMKLA VN R + ++D + +K++
Sbjct: 207 GCDKITGKAGMLDEIINYVQSLQRQIEFLSMKLAIVNPRPDFDMDDIFAKEV 258
>TAIR|locus:2202867 [details] [associations]
symbol:BPEp "AT1G59640" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0048446 "petal morphogenesis" evidence=IMP] [GO:0009062 "fatty
acid catabolic process" evidence=RCA] [GO:0009694 "jasmonic acid
metabolic process" evidence=RCA] [GO:0009753 "response to jasmonic
acid stimulus" evidence=RCA] [GO:0009827 "plant-type cell wall
modification" evidence=RCA] [GO:0009860 "pollen tube growth"
evidence=RCA] [GO:0010162 "seed dormancy process" evidence=RCA]
[GO:0048441 "petal development" evidence=RCA] [GO:0048443 "stamen
development" evidence=RCA] [GO:0048481 "ovule development"
evidence=RCA] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10
SUPFAM:SSF47459 HOGENOM:HOG000238007 EMBL:AM269753 EMBL:AM269754
EMBL:AC009317 EMBL:BT003964 EMBL:BT005064 EMBL:AY086373
EMBL:AB028232 IPI:IPI00530097 IPI:IPI00531813 PIR:B96620 PIR:T52428
RefSeq:NP_564749.1 RefSeq:NP_849829.1 UniGene:At.455
ProteinModelPortal:Q0JXE7 SMR:Q0JXE7 IntAct:Q0JXE7 STRING:Q0JXE7
PRIDE:Q0JXE7 EnsemblPlants:AT1G59640.2 GeneID:842254
KEGG:ath:AT1G59640 TAIR:At1g59640 eggNOG:NOG296410
InParanoid:Q0JXE7 OMA:RGASPEW PhylomeDB:Q0JXE7
ProtClustDB:CLSN2688917 Genevestigator:Q0JXE7 GO:GO:0048446
Uniprot:Q0JXE7
Length = 343
Score = 366 (133.9 bits), Expect = 1.2e-33, P = 1.2e-33
Identities = 80/147 (54%), Positives = 98/147 (66%)
Query: 289 NNTTKVAEANASESSKNKRCKPNEGKANGNGAVKAEDEGXXXXXXXXXXXXXXXXXXYIH 348
+ + K+ + +NKR K +E +G +AE G YIH
Sbjct: 82 SKSAKIVSTIGASEGENKRQKIDEVC---DGKAEAESLGTETEQKKQQMEPTKD---YIH 135
Query: 349 VRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQ 408
VRARRGQATDSHSLAER RREKISERMK+LQDLVPGCNKV GKAL+LDEIINY+QSLQRQ
Sbjct: 136 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 195
Query: 409 VEFLSMKLASVNTRLELNVDALMSKDI 435
VEFLSMKL +VN+R+ ++ K++
Sbjct: 196 VEFLSMKLEAVNSRMNPGIEVFPPKEV 222
>UNIPROTKB|Q6Z2G7 [details] [associations]
symbol:P0680A05.9 "Putative bHLH transcription factor"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AP008208 eggNOG:NOG251551 EMBL:AP005323 EMBL:AK119183
RefSeq:NP_001047868.1 UniGene:Os.7751
EnsemblPlants:LOC_Os02g47660.1 GeneID:4330462 KEGG:osa:4330462
OMA:TVESLCQ ProtClustDB:CLSN2693116 Uniprot:Q6Z2G7
Length = 361
Score = 342 (125.4 bits), Expect = 1.5e-33, Sum P(2) = 1.5e-33
Identities = 70/93 (75%), Positives = 80/93 (86%)
Query: 346 YIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSL 405
YIHVRARRGQATDSHSLAERVRRE+ISERM+ LQ+LVPGCNKVTGKA MLDEIINYVQSL
Sbjct: 161 YIHVRARRGQATDSHSLAERVRRERISERMRYLQELVPGCNKVTGKAGMLDEIINYVQSL 220
Query: 406 QRQVEFLSMKLASVNTRLELN-VDALMSKDIYQ 437
Q+QVEFLSMK+A+ N + N V+ L + + Q
Sbjct: 221 QKQVEFLSMKIAASNPVVNFNIVEDLFGRQLSQ 253
Score = 39 (18.8 bits), Expect = 1.5e-33, Sum P(2) = 1.5e-33
Identities = 9/31 (29%), Positives = 14/31 (45%)
Query: 273 AVSKGKGKETAASPSVNNTTKVAEANASESS 303
A + GKG+ A P +VA S ++
Sbjct: 118 AAAVGKGRPERARPGAKKKAEVASPKDSPAT 148
Score = 38 (18.4 bits), Expect = 1.9e-33, Sum P(2) = 1.9e-33
Identities = 11/47 (23%), Positives = 18/47 (38%)
Query: 269 RKRKAVSKGKGKETAASPSVNNTTKVAEANASESSKNKRCKPNEGKA 315
R +A K K ASP + T + A + + + G+A
Sbjct: 125 RPERARPGAKKKAEVASPKDSPATSASTVTAGQKTDYIHVRARRGQA 171
>TAIR|locus:2115200 [details] [associations]
symbol:BEE2 "AT4G36540" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0009740 "gibberellic acid mediated signaling pathway"
evidence=RCA] [GO:0010162 "seed dormancy process" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR
PROSITE:PS00678 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AL161589 EMBL:Z99708
EMBL:AF488591 EMBL:AF370231 EMBL:AY059122 EMBL:AY054588
EMBL:BT000388 EMBL:AY084997 EMBL:AY138254 IPI:IPI00540245
IPI:IPI00548266 PIR:D85431 RefSeq:NP_195372.1 RefSeq:NP_849508.1
UniGene:At.25403 ProteinModelPortal:Q93VJ4 SMR:Q93VJ4 IntAct:Q93VJ4
PRIDE:Q93VJ4 EnsemblPlants:AT4G36540.1 GeneID:829806
KEGG:ath:AT4G36540 TAIR:At4g36540 eggNOG:NOG240651
InParanoid:Q93VJ4 OMA:ELECHID PhylomeDB:Q93VJ4
ProtClustDB:CLSN2685556 Genevestigator:Q93VJ4 Uniprot:Q93VJ4
Length = 304
Score = 357 (130.7 bits), Expect = 1.1e-32, P = 1.1e-32
Identities = 88/166 (53%), Positives = 102/166 (61%)
Query: 304 KNKRCKPNEGKANGNGA--VKAEDEGXXXXXXXXXXXXXXXXXX-----YIHVRARRGQA 356
+NKR KP EGK +KAEDE YIHVRARRG+A
Sbjct: 91 QNKR-KP-EGKTEKREKKKIKAEDETEPSMKGKSNMSNTETSSEIQKPDYIHVRARRGEA 148
Query: 357 TDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMKL 416
TD HSLAER RREKIS++MK LQD+VPGCNKVTGKA MLDEIINYVQSLQ+QVEFLSMKL
Sbjct: 149 TDRHSLAERARREKISKKMKCLQDIVPGCNKVTGKAGMLDEIINYVQSLQQQVEFLSMKL 208
Query: 417 ASVNTRLELNVDALMSKDI--YQPNKPLPHSIFQIDSSASAFFSHQ 460
+ +N LE ++D L +K Y P S I + +F HQ
Sbjct: 209 SVINPELECHIDDLSAKQFQAYFTGPPEGDSKQSIMADFRSFPLHQ 254
>UNIPROTKB|Q84T08 [details] [associations]
symbol:OSJNBa0087C10.10 "BHLH transcription factor,
putative, expressed" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 EMBL:DP000009
EMBL:AP008209 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000238007 EMBL:AC108906 RefSeq:NP_001051605.1
UniGene:Os.33544 STRING:Q84T08 EnsemblPlants:LOC_Os03g58830.1
GeneID:4334471 KEGG:osa:4334471 OMA:GTSTSEW ProtClustDB:CLSN2694415
Uniprot:Q84T08
Length = 265
Score = 351 (128.6 bits), Expect = 4.7e-32, P = 4.7e-32
Identities = 69/89 (77%), Positives = 77/89 (86%)
Query: 346 YIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSL 405
YIHVRARRGQATDSHSLAER RREKISERMK+LQDLVPGCNKV GKA +LDEIINY+Q+L
Sbjct: 133 YIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKASVLDEIINYIQAL 192
Query: 406 QRQVEFLSMKLASVNTRLELNVDALMSKD 434
QRQVEFLSMKL +VN + ++A KD
Sbjct: 193 QRQVEFLSMKLEAVNAHVNNGIEAFPPKD 221
>TAIR|locus:505006688 [details] [associations]
symbol:AT5G50915 "AT5G50915" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0009739
"response to gibberellin stimulus" evidence=IEP] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0009739 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AB017063 EMBL:AF428350 EMBL:AY057549 EMBL:AY113059
EMBL:AY087602 IPI:IPI00536793 RefSeq:NP_568745.1 RefSeq:NP_851163.1
UniGene:At.23601 ProteinModelPortal:Q93W88 SMR:Q93W88
EnsemblPlants:AT5G50915.1 EnsemblPlants:AT5G50915.2 GeneID:835164
KEGG:ath:AT5G50915 TAIR:At5g50915 eggNOG:NOG262059
HOGENOM:HOG000242938 InParanoid:Q93W88 OMA:ISERMRT PhylomeDB:Q93W88
ProtClustDB:CLSN2689980 Genevestigator:Q93W88 Uniprot:Q93W88
Length = 286
Score = 351 (128.6 bits), Expect = 4.7e-32, P = 4.7e-32
Identities = 82/147 (55%), Positives = 94/147 (63%)
Query: 281 ETAASPSVNNTTKVAEANAS---ESSKNKRCKPNEGKANGNGAVKAED--EGXXXXXXXX 335
E + S + NTTK A +S + S N GK G A + + EG
Sbjct: 61 ENSGSEKLANTTKTATTGSSSCDQLSHGPSAITNTGKTRGRKARNSNNSKEGVEGRKSKK 120
Query: 336 XXXXXXXX--XXYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKAL 393
YIHVRARRGQATDSHSLAERVRREKISERM+ LQ+LVPGC+KVTGKAL
Sbjct: 121 QKRGSKEEPPTDYIHVRARRGQATDSHSLAERVRREKISERMRTLQNLVPGCDKVTGKAL 180
Query: 394 MLDEIINYVQSLQRQVEFLSMKLASVN 420
MLDEIINYVQ+LQ QVEFLSMKL S++
Sbjct: 181 MLDEIINYVQTLQTQVEFLSMKLTSIS 207
>TAIR|locus:2172209 [details] [associations]
symbol:AT5G62610 "AT5G62610" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
HSSP:P36956 EMBL:AB020751 HOGENOM:HOG000238007 EMBL:AY072104
EMBL:AY123023 EMBL:AY084578 EMBL:AF488611 IPI:IPI00518025
RefSeq:NP_201067.1 UniGene:At.24534 UniGene:At.24682
ProteinModelPortal:Q9LV17 SMR:Q9LV17 PaxDb:Q9LV17 PRIDE:Q9LV17
EnsemblPlants:AT5G62610.1 GeneID:836382 KEGG:ath:AT5G62610
GeneFarm:2935 TAIR:At5g62610 eggNOG:NOG269855 InParanoid:Q9LV17
OMA:DDSSKMV PhylomeDB:Q9LV17 ProtClustDB:CLSN2916786
Genevestigator:Q9LV17 Uniprot:Q9LV17
Length = 281
Score = 351 (128.6 bits), Expect = 4.7e-32, P = 4.7e-32
Identities = 80/159 (50%), Positives = 100/159 (62%)
Query: 266 FNSRKRKAVSKGKGKETAASPSVNNTTKVAEANASESSKNKRCKPNEGKANGNGAVKAED 325
+ SRK + ++ E +S V++++ E S K K C G NG+G+++ E
Sbjct: 73 WGSRKTRDLNS----EDDSSKMVSSSSSGNELKESGDKKRKLCGSESG--NGDGSMRPEG 126
Query: 326 E---GXXXXXXXXXXXXXXXXXXYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLV 382
E G YIHVRARRGQATD HSLAER RREKISE+M LQD++
Sbjct: 127 ETSSGGGGSKATEQKNKPEPPKDYIHVRARRGQATDRHSLAERARREKISEKMTALQDII 186
Query: 383 PGCNKVTGKALMLDEIINYVQSLQRQVEFLSMKLASVNT 421
PGCNK+ GKAL+LDEIINY+QSLQRQVEFLSMKL VN+
Sbjct: 187 PGCNKIIGKALVLDEIINYIQSLQRQVEFLSMKLEVVNS 225
>TAIR|locus:2053766 [details] [associations]
symbol:AT2G42300 "AT2G42300" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA;TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AC005956 EMBL:AY065411 EMBL:AY096521 EMBL:AK175584
EMBL:AK176019 EMBL:AK176634 EMBL:AF488583 IPI:IPI00532521
PIR:C84852 RefSeq:NP_850368.1 UniGene:At.28495
ProteinModelPortal:Q8VZ02 SMR:Q8VZ02 EnsemblPlants:AT2G42300.1
GeneID:818831 KEGG:ath:AT2G42300 TAIR:At2g42300 eggNOG:NOG301522
HOGENOM:HOG000037005 InParanoid:Q8VZ02 OMA:PEWGREE PhylomeDB:Q8VZ02
ProtClustDB:CLSN2680198 Genevestigator:Q8VZ02 Uniprot:Q8VZ02
Length = 327
Score = 348 (127.6 bits), Expect = 9.8e-32, P = 9.8e-32
Identities = 82/185 (44%), Positives = 112/185 (60%)
Query: 281 ETAASPSVNNTTKVAEANASESSKNKRCKPNEGKANGNGAVKAEDEGXXXXXXXXXXXXX 340
ETA S N + A E ++ N+ ++ +G K ++
Sbjct: 118 ETANSLPSNPGANLDRVKA-EPAETDSMVENQNQSYSSGKRKEREKKVKSSTKKNKSSVE 176
Query: 341 XXXXXYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIIN 400
Y+HVRARRGQATD+HSLAER RREKI+ RMKLLQ+LVPGC+K+ G AL+LDEIIN
Sbjct: 177 SDKLPYVHVRARRGQATDNHSLAERARREKINARMKLLQELVPGCDKIQGTALVLDEIIN 236
Query: 401 YVQSLQRQVEFLSMKLASVNTRLELNVDALMSKDIYQPNKPLPHSIFQIDSSASAFFSHQ 460
+VQ+LQRQVE LSM+LA+VN R++ N+D++++ + N L +D S +A HQ
Sbjct: 237 HVQTLQRQVEMLSMRLAAVNPRIDFNLDSILASE----NGSL------MDGSFNAESYHQ 286
Query: 461 PQQNP 465
QQ P
Sbjct: 287 LQQWP 291
>UNIPROTKB|Q8GZV6 [details] [associations]
symbol:OJ1017C11.10 "Putative uncharacterized protein
OJ1017C11.10" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR001810
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50181 PROSITE:PS50888
SMART:SM00256 SMART:SM00353 GO:GO:0005634 SUPFAM:SSF81383
Gene3D:4.10.280.10 SUPFAM:SSF47459 InterPro:IPR019955
PROSITE:PS50053 EMBL:AC135157 ProteinModelPortal:Q8GZV6
Gramene:Q8GZV6 Uniprot:Q8GZV6
Length = 776
Score = 349 (127.9 bits), Expect = 7.0e-31, P = 7.0e-31
Identities = 83/145 (57%), Positives = 99/145 (68%)
Query: 346 YIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSL 405
Y+HVRA+RGQAT+SHSLAER RREKI+ERMKLLQDLVPGCNK+TGKA+MLDEIINYVQSL
Sbjct: 625 YVHVRAKRGQATNSHSLAERFRREKINERMKLLQDLVPGCNKITGKAMMLDEIINYVQSL 684
Query: 406 QRQVEFLSMKLASVNTRLELNVDALMSKDIYQPNKPLPHSIFQIDSSASAFFSHQPQQNP 465
QRQVEFLSMKL++++ ELN D D+ I + SAF PQ +
Sbjct: 685 QRQVEFLSMKLSTISP--ELNSDL----DL--------QDILCSQDARSAFLGCSPQLSN 730
Query: 466 ALHGNISNGTMTQCPVDP-LDNALC 489
A H N+ QC P L ++C
Sbjct: 731 A-HPNLYRAAQ-QCLSPPGLYGSVC 753
>UNIPROTKB|Q69WS3 [details] [associations]
symbol:OJ1118_E12.15 "Putative bHLH protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AP003743
ProteinModelPortal:Q69WS3 Gramene:Q69WS3 Uniprot:Q69WS3
Length = 268
Score = 326 (119.8 bits), Expect = 2.1e-29, P = 2.1e-29
Identities = 89/191 (46%), Positives = 108/191 (56%)
Query: 300 SESSKNKRCKPNEGKANGNGAVKAE---DEGXXXXXXXXXXXXXXX-XXXYIHVRARRGQ 355
S++ + KR KP + ++ N +++ E D G YIHVRARRGQ
Sbjct: 76 SDAPEAKRLKPMKS-SDKNDSLRTEAGTDSGNSSKAADKNATPPEPPKQDYIHVRARRGQ 134
Query: 356 ATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEF---- 411
ATDSHSLAER RREKISERMK+LQDLVPGCNKV GKA +LDEIINY+QSLQ QVEF
Sbjct: 135 ATDSHSLAERARREKISERMKILQDLVPGCNKVIGKASVLDEIINYIQSLQHQVEFMFKY 194
Query: 412 --------LSMKLASVNTRLELNVDALMSKDI-YQPNKPLPHSIFQIDSSASAFFSHQPQ 462
LSMKL +VN+ + + A SKD QP F D + F+ Q
Sbjct: 195 LIELFLQFLSMKLEAVNSHMINGIVAFPSKDFGAQPYNTAAGLTF--DPQTTREFA-QGS 251
Query: 463 QNPALHGNISN 473
+ LH I N
Sbjct: 252 TSEWLHMQIGN 262
>TAIR|locus:2027809 [details] [associations]
symbol:BEE3 "AT1G73830" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000090950 ProtClustDB:CLSN2680013 EMBL:AF488585
EMBL:AC012679 EMBL:AK118781 EMBL:BT006055 IPI:IPI00541876
RefSeq:NP_177524.2 UniGene:At.34949 ProteinModelPortal:Q8GWK7
SMR:Q8GWK7 EnsemblPlants:AT1G73830.1 GeneID:843719
KEGG:ath:AT1G73830 TAIR:At1g73830 eggNOG:NOG264296
InParanoid:Q8GWK7 OMA:LENNFHQ PhylomeDB:Q8GWK7
Genevestigator:Q8GWK7 Uniprot:Q8GWK7
Length = 261
Score = 298 (110.0 bits), Expect = 2.5e-29, Sum P(2) = 2.5e-29
Identities = 61/88 (69%), Positives = 71/88 (80%)
Query: 347 IHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQ 406
+HVRARRGQATDSHS+AERVRR KI+ER+K LQD+VPGC K G A MLDEIINYVQSLQ
Sbjct: 145 VHVRARRGQATDSHSIAERVRRGKINERLKCLQDIVPGCYKTMGMATMLDEIINYVQSLQ 204
Query: 407 RQVEFLSMKLASVNTRLELN--VDALMS 432
QVEFLSMKL + ++ + N DA+ S
Sbjct: 205 NQVEFLSMKLTAASSYYDFNSETDAVES 232
Score = 47 (21.6 bits), Expect = 2.5e-29, Sum P(2) = 2.5e-29
Identities = 16/65 (24%), Positives = 31/65 (47%)
Query: 264 NDFNSRKRKAVSKGKG-KETAASPSVNNTTKV-AEANASESSKNKRCKPNEGKANGNGAV 321
+ F+++KRK++ + E + S +T+ N + S+KN + GK + N
Sbjct: 81 SQFDTKKRKSLMEAVSTSENSVSDQTLSTSSAQVSINGNISTKNNSSR--RGKRSKNREE 138
Query: 322 KAEDE 326
+ E E
Sbjct: 139 EKERE 143
>TAIR|locus:2032990 [details] [associations]
symbol:CES "AT1G25330" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IMP;TAS]
[GO:2000488 "positive regulation of brassinosteroid biosynthetic
process" evidence=IMP] [GO:0048441 "petal development"
evidence=RCA] [GO:0048443 "stamen development" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
eggNOG:NOG264296 EMBL:AC079374 EMBL:DQ446289 EMBL:DQ652859
EMBL:AK175757 EMBL:AY088885 EMBL:AF488607 IPI:IPI00519962
PIR:B86383 PIR:D86381 RefSeq:NP_564229.1 UniGene:At.48236
UniGene:At.63980 ProteinModelPortal:A4D998 SMR:A4D998
EnsemblPlants:AT1G25330.1 GeneID:839117 KEGG:ath:AT1G25330
GeneFarm:2907 TAIR:At1g25330 InParanoid:A4D998 PhylomeDB:A4D998
Genevestigator:A4D998 GO:GO:2000488 Uniprot:A4D998
Length = 223
Score = 300 (110.7 bits), Expect = 7.5e-29, Sum P(2) = 7.5e-29
Identities = 60/91 (65%), Positives = 74/91 (81%)
Query: 347 IHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQ 406
+HVRA+RGQATDSHSLAERVRREKI+ER+K LQDLVPGC K G A+MLD II+YV+SLQ
Sbjct: 102 VHVRAKRGQATDSHSLAERVRREKINERLKCLQDLVPGCYKAMGMAVMLDVIIDYVRSLQ 161
Query: 407 RQVEFLSMKLASVNTRLELNVDALMSKDIYQ 437
Q+EFLSMKL++ + +LN + DI+Q
Sbjct: 162 NQIEFLSMKLSAASACYDLNSLDIEPTDIFQ 192
Score = 40 (19.1 bits), Expect = 7.5e-29, Sum P(2) = 7.5e-29
Identities = 14/38 (36%), Positives = 21/38 (55%)
Query: 290 NTTKVAEANASES-SKNKRCKPNEGKA-NGNGAVKAED 325
NT + + N ES SK +R + E +A NG+ K +D
Sbjct: 65 NTRR--KGNKEESGSKRRRKRSEEEEAMNGDETQKPKD 100
>TAIR|locus:2014144 [details] [associations]
symbol:BEE1 "BR enhanced expression 1" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AC013354
EMBL:AY138253 EMBL:AF488579 EMBL:AK117269 EMBL:BT005268
IPI:IPI00539846 RefSeq:NP_173276.2 UniGene:At.46141
ProteinModelPortal:Q8GZ13 SMR:Q8GZ13 IntAct:Q8GZ13
EnsemblPlants:AT1G18400.1 GeneID:838421 KEGG:ath:AT1G18400
TAIR:At1g18400 eggNOG:euNOG17991 HOGENOM:HOG000090950
InParanoid:Q8GZ13 PhylomeDB:Q8GZ13 ProtClustDB:CLSN2680013
Genevestigator:Q8GZ13 Uniprot:Q8GZ13
Length = 260
Score = 295 (108.9 bits), Expect = 7.4e-26, P = 7.4e-26
Identities = 61/88 (69%), Positives = 71/88 (80%)
Query: 347 IHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQ 406
+HVRARRGQATDSHSLAERVRR KI+ER++ LQD+VPGC K G A MLDEIINYVQSLQ
Sbjct: 143 VHVRARRGQATDSHSLAERVRRGKINERLRCLQDMVPGCYKAMGMATMLDEIINYVQSLQ 202
Query: 407 RQVEFLSMKLASVNTRLELN--VDALMS 432
QVEFLSMKL + ++ + N DA+ S
Sbjct: 203 NQVEFLSMKLTAASSFYDFNSETDAVDS 230
>TAIR|locus:2076581 [details] [associations]
symbol:AT3G57800 "AT3G57800" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AL049660 Gene3D:4.10.280.10
SUPFAM:SSF47459 HOGENOM:HOG000037005 ProtClustDB:CLSN2680198
EMBL:AF488593 EMBL:AL132977 EMBL:AY139773 EMBL:BT003037
EMBL:AY085849 IPI:IPI00532305 IPI:IPI00535946 PIR:T46002
RefSeq:NP_567057.2 RefSeq:NP_850745.1 UniGene:At.34797
ProteinModelPortal:Q3EAI1 EnsemblPlants:AT3G57800.1 GeneID:825530
KEGG:ath:AT3G57800 TAIR:At3g57800 eggNOG:NOG254513
InParanoid:Q3EAI1 OMA:MVASANL PhylomeDB:Q3EAI1
Genevestigator:Q3EAI1 Uniprot:Q3EAI1
Length = 426
Score = 197 (74.4 bits), Expect = 2.3e-24, Sum P(2) = 2.3e-24
Identities = 46/91 (50%), Positives = 57/91 (62%)
Query: 300 SESS-KNKRCKPNEGKANGNGAVKAEDEGXXXXXXXXXXXXXXXXXXYIHVRARRGQATD 358
S+S+ +N+ PN+ N NG K ++ Y+HVRARRGQATD
Sbjct: 156 SDSAIENQIPCPNQN--NRNGKRKDFEKKGKSSTKKNKSSEENEKLPYVHVRARRGQATD 213
Query: 359 SHSLAERVRREKISERMKLLQDLVPGCNKVT 389
SHSLAER RREKI+ RMKLLQ+LVPGC+K T
Sbjct: 214 SHSLAERARREKINARMKLLQELVPGCDKGT 244
Score = 152 (58.6 bits), Expect = 2.3e-24, Sum P(2) = 2.3e-24
Identities = 28/48 (58%), Positives = 41/48 (85%)
Query: 387 KVTGKALMLDEIINYVQSLQRQVEFLSMKLASVNTRLELNVDALMSKD 434
++ G AL+LDEIIN+VQSLQRQVE LSM+LA+VN R++ N+D +++ +
Sbjct: 289 RIQGTALVLDEIINHVQSLQRQVEMLSMRLAAVNPRIDFNLDTILASE 336
>TAIR|locus:2147760 [details] [associations]
symbol:LRL3 "AT5G58010" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;TAS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0080147 "root hair cell development"
evidence=IMP] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10
SUPFAM:SSF47459 HSSP:P36956 HOGENOM:HOG000239571 GO:GO:0080147
EMBL:AB026635 EMBL:AF488614 IPI:IPI00540554 RefSeq:NP_200609.1
UniGene:At.29300 ProteinModelPortal:Q9LSQ3 SMR:Q9LSQ3 PRIDE:Q9LSQ3
EnsemblPlants:AT5G58010.1 GeneID:835913 KEGG:ath:AT5G58010
TAIR:At5g58010 eggNOG:NOG252939 InParanoid:Q9LSQ3 OMA:TEQRVAK
PhylomeDB:Q9LSQ3 ProtClustDB:CLSN2916934 Genevestigator:Q9LSQ3
Uniprot:Q9LSQ3
Length = 297
Score = 224 (83.9 bits), Expect = 6.4e-18, P = 6.4e-18
Identities = 54/86 (62%), Positives = 63/86 (73%)
Query: 349 VRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQ 408
VRARRGQATD HS+AER+RRE+I+ERMK LQ+LVP NK T KA MLDEII YV+ LQ Q
Sbjct: 99 VRARRGQATDPHSIAERLRRERIAERMKSLQELVPNTNK-TDKASMLDEIIEYVRFLQLQ 157
Query: 409 VEFLSMK----LASVNTRLE-LNVDA 429
V+ LSM SV RL L+ +A
Sbjct: 158 VKVLSMSRLGGAGSVGPRLNGLSAEA 183
>UNIPROTKB|Q7Y1H4 [details] [associations]
symbol:OSJNBa0094F01.11 "Putative uncharacterized protein
OSJNBa0094F01.11" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 EMBL:DP000009
EMBL:AP008209 Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0009567
EMBL:AC093713 EMBL:AK104412 RefSeq:NP_001051563.1 UniGene:Os.27522
EnsemblPlants:LOC_Os03g58330.1 GeneID:4334429 KEGG:osa:4334429
OMA:TDGTERQ ProtClustDB:CLSN2694399 Uniprot:Q7Y1H4
Length = 294
Score = 217 (81.4 bits), Expect = 3.7e-17, P = 3.7e-17
Identities = 48/85 (56%), Positives = 63/85 (74%)
Query: 349 VRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQ 408
VRARRGQATD HS+AER+RRE+I+ERM+ LQ+LVP NK T +A MLDEI++YV+ L+ Q
Sbjct: 133 VRARRGQATDPHSIAERLRRERIAERMRALQELVPNTNK-TDRAAMLDEILDYVKFLRLQ 191
Query: 409 VEFLSM-KLASVNTRLELNVDALMS 432
V+ LSM +L +L D +S
Sbjct: 192 VKVLSMSRLGGAGAVAQLVADIPLS 216
>UNIPROTKB|Q6Z7E7 [details] [associations]
symbol:P0020C11.18 "Putative bHLH transcription factor
PTF1" species:39947 "Oryza sativa Japonica Group" [GO:0005634
"nucleus" evidence=IC] InterPro:IPR011598 InterPro:IPR024097
InterPro:IPR024102 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 GO:GO:0006355 Gene3D:4.10.280.10 SUPFAM:SSF47459
HSSP:P36956 PANTHER:PTHR10014 PANTHER:PTHR10014:SF30 EMBL:CM000139
EMBL:AP004865 EMBL:AK241924 EnsemblPlants:LOC_Os02g35660.1
OMA:TTAMQYL Uniprot:Q6Z7E7
Length = 524
Score = 225 (84.3 bits), Expect = 7.4e-17, Sum P(2) = 7.4e-17
Identities = 49/66 (74%), Positives = 56/66 (84%)
Query: 349 VRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQ 408
VRARRGQATD HS+AER+RREKIS+RMK LQ+LVP NK T KA MLDEII+YV+ LQ Q
Sbjct: 314 VRARRGQATDPHSIAERLRREKISDRMKDLQELVPNSNK-TNKASMLDEIIDYVKFLQLQ 372
Query: 409 VEFLSM 414
V+ LSM
Sbjct: 373 VKVLSM 378
Score = 53 (23.7 bits), Expect = 7.4e-17, Sum P(2) = 7.4e-17
Identities = 16/47 (34%), Positives = 24/47 (51%)
Query: 264 NDFNSRKRKAVSKGKGKETAASPSVNNTTKVAEANASESSKNKRCKP 310
N S ++ A + G GK A+P VN + + + N S S+ N KP
Sbjct: 267 NATQSHRQPAEACG-GKNGGAAPFVNLSEVLPKGNGSGSAGNGAPKP 312
>TAIR|locus:2126624 [details] [associations]
symbol:LRL2 "AT4G30980" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;TAS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0080147
"root hair cell development" evidence=IMP] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AL022198
EMBL:AL161578 HOGENOM:HOG000239571 GO:GO:0080147
ProtClustDB:CLSN2683027 EMBL:AF488601 IPI:IPI00524968 PIR:G85362
RefSeq:NP_194827.2 UniGene:At.31786 ProteinModelPortal:Q8S3D5
SMR:Q8S3D5 EnsemblPlants:AT4G30980.1 GeneID:829223
KEGG:ath:AT4G30980 TAIR:At4g30980 eggNOG:NOG295725
InParanoid:O65552 OMA:GGSHENT PhylomeDB:Q8S3D5
Genevestigator:Q8S3D5 Uniprot:Q8S3D5
Length = 310
Score = 221 (82.9 bits), Expect = 1.4e-16, P = 1.4e-16
Identities = 48/66 (72%), Positives = 56/66 (84%)
Query: 349 VRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQ 408
VRARRGQATD HS+AER+RRE+I+ERMK LQ+LVP NK T KA MLDEII+YV+ LQ Q
Sbjct: 130 VRARRGQATDPHSIAERLRRERIAERMKSLQELVPNGNK-TDKASMLDEIIDYVKFLQLQ 188
Query: 409 VEFLSM 414
V+ LSM
Sbjct: 189 VKVLSM 194
>TAIR|locus:2047555 [details] [associations]
symbol:LRL1 "AT2G24260" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;TAS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0080147
"root hair cell development" evidence=IMP] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AC005967
HOGENOM:HOG000239571 GO:GO:0080147 EMBL:AF488599 EMBL:AK176370
EMBL:AK176390 EMBL:BT026512 IPI:IPI00528969 PIR:E84634
RefSeq:NP_180003.1 UniGene:At.20792 ProteinModelPortal:Q9ZUG9
SMR:Q9ZUG9 EnsemblPlants:AT2G24260.1 GeneID:816961
KEGG:ath:AT2G24260 TAIR:At2g24260 eggNOG:NOG284260
InParanoid:Q9ZUG9 OMA:STATCHS PhylomeDB:Q9ZUG9
ProtClustDB:CLSN2683027 Genevestigator:Q9ZUG9 Uniprot:Q9ZUG9
Length = 350
Score = 223 (83.6 bits), Expect = 3.8e-16, P = 3.8e-16
Identities = 53/115 (46%), Positives = 69/115 (60%)
Query: 313 GKANGNGAVKAEDEGXXXXXXXXXXXXXXXXXXYIHVRARRGQATDSHSLAERVRREKIS 372
G N G + + + +RARRGQATD HS+AER+RRE+I+
Sbjct: 102 GLMNQQGQTQTQTQPQASASTATGGTVAAPPQSRTKIRARRGQATDPHSIAERLRRERIA 161
Query: 373 ERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMK----LASVNTRL 423
ERMK LQ+LVP NK T KA MLDEII+YV+ LQ QV+ LSM ASV++++
Sbjct: 162 ERMKALQELVPNGNK-TDKASMLDEIIDYVKFLQLQVKVLSMSRLGGAASVSSQI 215
>TAIR|locus:2132303 [details] [associations]
symbol:UNE12 "AT4G02590" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0009567 "double fertilization forming a zygote and endosperm"
evidence=IMP] [GO:0031347 "regulation of defense response"
evidence=IMP] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0007275 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:4.10.280.10 SUPFAM:SSF47459 HOGENOM:HOG000239571
ProtClustDB:CLSN2687635 EMBL:AC002330 EMBL:AL161494 GO:GO:0031347
GO:GO:0009567 EMBL:AF488592 EMBL:AF367328 EMBL:AY143951
EMBL:AY088218 IPI:IPI00545077 IPI:IPI00892352 PIR:T01090
RefSeq:NP_001031577.1 RefSeq:NP_001118919.1 RefSeq:NP_567245.1
UniGene:At.20028 ProteinModelPortal:O22768 SMR:O22768 IntAct:O22768
PaxDb:O22768 PRIDE:O22768 EnsemblPlants:AT4G02590.1
EnsemblPlants:AT4G02590.2 GeneID:828126 KEGG:ath:AT4G02590
TAIR:At4g02590 eggNOG:euNOG02041 InParanoid:O22768 OMA:PAWEKWS
PhylomeDB:O22768 Genevestigator:O22768 Uniprot:O22768
Length = 310
Score = 210 (79.0 bits), Expect = 5.4e-15, P = 5.4e-15
Identities = 46/88 (52%), Positives = 63/88 (71%)
Query: 349 VRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQ 408
VRARRGQATD HS+AER+RRE+I+ER++ LQ+LVP NK T +A M+DEI++YV+ L+ Q
Sbjct: 146 VRARRGQATDPHSIAERLRRERIAERIRALQELVPTVNK-TDRAAMIDEIVDYVKFLRLQ 204
Query: 409 VEFLSM-KLASVNTRLELNVDALMSKDI 435
V+ LSM +L L D +S +
Sbjct: 205 VKVLSMSRLGGAGAVAPLVTDMPLSSSV 232
>UNIPROTKB|Q69Y51 [details] [associations]
symbol:P0698A06.26-2 "Putative bHLH transcription factor
PTF1" species:39947 "Oryza sativa Japonica Group" [GO:0005634
"nucleus" evidence=IC] InterPro:IPR011598 InterPro:IPR024097
InterPro:IPR024102 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 GO:GO:0006355 Gene3D:4.10.280.10 SUPFAM:SSF47459
PANTHER:PTHR10014 PANTHER:PTHR10014:SF30 EMBL:AP003514
ProteinModelPortal:Q69Y51 EnsemblPlants:LOC_Os06g09370.3
Gramene:Q69Y51 HOGENOM:HOG000241730 Uniprot:Q69Y51
Length = 401
Score = 214 (80.4 bits), Expect = 8.7e-15, P = 8.7e-15
Identities = 48/65 (73%), Positives = 53/65 (81%)
Query: 350 RARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQV 409
RARRGQATD HS+AER+RREKISERMK LQ LVP NK KA MLDEII+YV+ LQ QV
Sbjct: 240 RARRGQATDPHSIAERLRREKISERMKNLQVLVPNSNKAD-KASMLDEIIDYVKFLQLQV 298
Query: 410 EFLSM 414
+ LSM
Sbjct: 299 KVLSM 303
>UNIPROTKB|Q6EPZ6 [details] [associations]
symbol:P0014G10.34 "BHLH transcription factor PTF1-like
protein" species:39947 "Oryza sativa Japonica Group" [GO:0005634
"nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AP008215 HOGENOM:HOG000239571 EMBL:AP005784
RefSeq:NP_001175840.1 UniGene:Os.59658
EnsemblPlants:LOC_Os09g25040.1 GeneID:9272478 KEGG:osa:9272478
OMA:SMSVLTA Uniprot:Q6EPZ6
Length = 499
Score = 214 (80.4 bits), Expect = 1.6e-14, P = 1.6e-14
Identities = 50/81 (61%), Positives = 62/81 (76%)
Query: 349 VRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKV--TGKALMLDEIINYVQSLQ 406
VRARRGQATD HS+AER+RRE+I+ERMK LQ+LVP NK+ T KA MLDEII+YV+ LQ
Sbjct: 250 VRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKLMQTDKASMLDEIIDYVKFLQ 309
Query: 407 RQVEFLSMKLASVNTRLELNV 427
QV+ AS T+L ++V
Sbjct: 310 LQVK------ASTYTKLLIHV 324
>TAIR|locus:2007534 [details] [associations]
symbol:AT1G03040 "AT1G03040" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AF251692
EMBL:AC006550 EMBL:AY054469 EMBL:AY114633 IPI:IPI00529284
PIR:B86161 RefSeq:NP_001184895.1 RefSeq:NP_563672.1
UniGene:At.20497 ProteinModelPortal:Q93Y00 SMR:Q93Y00 IntAct:Q93Y00
PaxDb:Q93Y00 PRIDE:Q93Y00 EnsemblPlants:AT1G03040.1 GeneID:839446
KEGG:ath:AT1G03040 TAIR:At1g03040 eggNOG:NOG281566
HOGENOM:HOG000239571 InParanoid:Q93Y00 OMA:SIVKPEM PhylomeDB:Q93Y00
ProtClustDB:CLSN2687635 Genevestigator:Q93Y00 Uniprot:Q93Y00
Length = 302
Score = 205 (77.2 bits), Expect = 1.8e-14, P = 1.8e-14
Identities = 42/66 (63%), Positives = 56/66 (84%)
Query: 349 VRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQ 408
VRARRGQATD HS+AER+RRE+I+ER++ LQ+LVP NK T +A M+DEI++YV+ L+ Q
Sbjct: 144 VRARRGQATDPHSIAERLRRERIAERIRSLQELVPTVNK-TDRAAMIDEIVDYVKFLRLQ 202
Query: 409 VEFLSM 414
V+ LSM
Sbjct: 203 VKVLSM 208
>UNIPROTKB|Q6Z1F9 [details] [associations]
symbol:OSJNBa0033D24.39 "BHLH transcription factor-like
protein" species:39947 "Oryza sativa Japonica Group" [GO:0005634
"nucleus" evidence=IC] InterPro:IPR011598 GO:GO:0005634
EMBL:AP008214 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AP005439
EMBL:AP004464 RefSeq:NP_001062365.1 UniGene:Os.89290 GeneID:4346166
KEGG:osa:4346166 Uniprot:Q6Z1F9
Length = 143
Score = 189 (71.6 bits), Expect = 4.2e-14, P = 4.2e-14
Identities = 44/85 (51%), Positives = 59/85 (69%)
Query: 375 MKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMKLASVNTRLE---LNVDALM 431
M++LQ LVPGC+KVTGKAL+LDEIINYVQSLQ QVEFLSM++AS++ L ++ D L
Sbjct: 1 MRMLQALVPGCDKVTGKALILDEIINYVQSLQNQVEFLSMRIASMSPVLYGFGMDSDGLH 60
Query: 432 SKDI---YQPNKPLPHSIFQIDSSA 453
+ I +Q +P+ + S A
Sbjct: 61 DQKIGGMFQEALAMPNPVLNQSSPA 85
>UNIPROTKB|Q69WX7 [details] [associations]
symbol:P0417G12.19 "Basic helix-loop-helix protein-like"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 GO:GO:0005634 Gene3D:4.10.280.10
EMBL:AP003626 EMBL:AP003711 EMBL:AK070970
EnsemblPlants:LOC_Os06g41060.1 OMA:KNGMDLE Uniprot:Q69WX7
Length = 154
Score = 188 (71.2 bits), Expect = 5.5e-14, P = 5.5e-14
Identities = 36/50 (72%), Positives = 48/50 (96%)
Query: 375 MKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMKLASVNTRLE 424
M+LL++LVPGC+KV+G AL+LDEIIN+VQSLQRQVE+LSM+LA+VN R++
Sbjct: 1 MELLKELVPGCSKVSGTALVLDEIINHVQSLQRQVEYLSMRLAAVNPRVD 50
>UNIPROTKB|Q8S490 [details] [associations]
symbol:rau1 "Transcription factor RAU1" species:4530 "Oryza
sativa" [GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AF465824
ProteinModelPortal:Q8S490 Gramene:Q8S490 Genevestigator:Q8S490
Uniprot:Q8S490
Length = 150
Score = 165 (63.1 bits), Expect = 1.7e-11, P = 1.7e-11
Identities = 34/65 (52%), Positives = 49/65 (75%)
Query: 349 VRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQ 408
+RA+RG AT S+AERVRR +ISER++ LQ+LVP +K T A MLD ++Y++ LQ+Q
Sbjct: 69 IRAKRGCATHPRSIAERVRRTRISERIRKLQELVPNMDKQTNTADMLDLAVDYIKDLQKQ 128
Query: 409 VEFLS 413
V+ L+
Sbjct: 129 VKGLN 133
>TAIR|locus:2077680 [details] [associations]
symbol:PIL6 "AT3G59060" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0009585 "red,
far-red light phototransduction" evidence=IMP] [GO:0009693
"ethylene biosynthetic process" evidence=IMP] [GO:0010600
"regulation of auxin biosynthetic process" evidence=IDA]
[GO:0010928 "regulation of auxin mediated signaling pathway"
evidence=IDA] [GO:0000096 "sulfur amino acid metabolic process"
evidence=RCA] [GO:0006546 "glycine catabolic process" evidence=RCA]
[GO:0006636 "unsaturated fatty acid biosynthetic process"
evidence=RCA] [GO:0006733 "oxidoreduction coenzyme metabolic
process" evidence=RCA] [GO:0006766 "vitamin metabolic process"
evidence=RCA] [GO:0007623 "circadian rhythm" evidence=RCA]
[GO:0008652 "cellular amino acid biosynthetic process"
evidence=RCA] [GO:0009072 "aromatic amino acid family metabolic
process" evidence=RCA] [GO:0009073 "aromatic amino acid family
biosynthetic process" evidence=RCA] [GO:0009106 "lipoate metabolic
process" evidence=RCA] [GO:0009108 "coenzyme biosynthetic process"
evidence=RCA] [GO:0009117 "nucleotide metabolic process"
evidence=RCA] [GO:0009630 "gravitropism" evidence=RCA] [GO:0009684
"indoleacetic acid biosynthetic process" evidence=RCA] [GO:0009695
"jasmonic acid biosynthetic process" evidence=RCA] [GO:0009965
"leaf morphogenesis" evidence=RCA] [GO:0010017 "red or far-red
light signaling pathway" evidence=RCA] [GO:0015995 "chlorophyll
biosynthetic process" evidence=RCA] [GO:0019288 "isopentenyl
diphosphate biosynthetic process, mevalonate-independent pathway"
evidence=RCA] [GO:0019344 "cysteine biosynthetic process"
evidence=RCA] [GO:0019748 "secondary metabolic process"
evidence=RCA] [GO:0019761 "glucosinolate biosynthetic process"
evidence=RCA] [GO:0030003 "cellular cation homeostasis"
evidence=RCA] [GO:0030154 "cell differentiation" evidence=RCA]
[GO:0044272 "sulfur compound biosynthetic process" evidence=RCA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=RCA] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0009693 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
EMBL:AL163527 GO:GO:0009585 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000240264 HSSP:P22415 GO:GO:0010928
ProtClustDB:CLSN2680212 GO:GO:0010600 EMBL:AF488598 EMBL:AB103112
EMBL:AY081271 EMBL:BT000049 IPI:IPI00541791 IPI:IPI00543835
IPI:IPI00890365 PIR:T47788 RefSeq:NP_001030889.1
RefSeq:NP_001030890.1 RefSeq:NP_191465.3 RefSeq:NP_851021.1
UniGene:At.43437 UniGene:At.67329 ProteinModelPortal:Q84LH8
SMR:Q84LH8 IntAct:Q84LH8 STRING:Q84LH8 EnsemblPlants:AT3G59060.2
EnsemblPlants:AT3G59060.3 EnsemblPlants:AT3G59060.4 GeneID:825075
KEGG:ath:AT3G59060 TAIR:At3g59060 eggNOG:NOG259206
InParanoid:Q84LH8 OMA:SHCGSNQ PhylomeDB:Q84LH8
Genevestigator:Q84LH8 Uniprot:Q84LH8
Length = 444
Score = 178 (67.7 bits), Expect = 6.2e-11, Sum P(2) = 6.2e-11
Identities = 62/190 (32%), Positives = 99/190 (52%)
Query: 352 RRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEF 411
RR +A + H+L+ER RR++I+ERMK LQ+L+P C++ T KA +LDE I+Y++SLQ Q++
Sbjct: 253 RRSRAAEVHNLSERRRRDRINERMKALQELIPHCSR-TDKASILDEAIDYLKSLQMQLQV 311
Query: 412 LSMKLASVNTRLELNVDALMSKDIYQPNKPLPHSIFQIDSSASAFFSHQPQQNPALHGNI 471
+ M + + A S ++ + P+ I Q+ + S P N + N
Sbjct: 312 MWM-----GSGMAAAAAAAASPMMFPGVQSSPY-INQMAMQSQMQLSQFPVMNRSAPQN- 364
Query: 472 SNGTMTQCPVDPLDNALCRNLSMQLPQLEQFTETIPQFQNFGEDDLQSIVQ-----MGFG 526
G + Q PV A + LS QL ++ IPQ G + +Q++ Q +GFG
Sbjct: 365 HPGLVCQNPVQLQLQAQNQILS---EQLARYMGGIPQMPPAG-NQMQTVQQQPADMLGFG 420
Query: 527 Q--NPNSETS 534
P S+ S
Sbjct: 421 SPAGPQSQLS 430
Score = 45 (20.9 bits), Expect = 6.2e-11, Sum P(2) = 6.2e-11
Identities = 12/41 (29%), Positives = 20/41 (48%)
Query: 24 AMEIQIQATNEMMNCSSEQSSDCFFNPNNWEKSTDHSLQFD 64
+M + + E ++ SS SS C + NN E + S+ D
Sbjct: 172 SMSDRSKNVEERLDTSSGGSSGCSYGRNNKETVSGTSVTID 212
>UNIPROTKB|Q6K8Y4 [details] [associations]
symbol:OJ1695_H09.18 "Basic helix-loop-helix (BHLH)-like"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000239571 EMBL:AP003975 EMBL:AP004094
EnsemblPlants:LOC_Os02g55250.1 OMA:GQDDFFD Uniprot:Q6K8Y4
Length = 463
Score = 149 (57.5 bits), Expect = 8.8e-11, Sum P(2) = 8.8e-11
Identities = 33/49 (67%), Positives = 40/49 (81%)
Query: 366 VRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSM 414
+RRE+I+ERMK LQ+LVP NK T KA MLDEII+YV+ LQ QV+ LSM
Sbjct: 251 LRRERIAERMKALQELVPNANK-TDKASMLDEIIDYVKFLQLQVKVLSM 298
Score = 76 (31.8 bits), Expect = 8.8e-11, Sum P(2) = 8.8e-11
Identities = 15/17 (88%), Positives = 16/17 (94%)
Query: 350 RARRGQATDSHSLAERV 366
RARRGQATD HS+AERV
Sbjct: 213 RARRGQATDPHSIAERV 229
>TAIR|locus:2061634 [details] [associations]
symbol:PIL5 "phytochrome interacting factor 3-like 5"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS;IDA;TAS] [GO:0005515
"protein binding" evidence=IPI] [GO:0015995 "chlorophyll
biosynthetic process" evidence=IMP] [GO:0010187 "negative
regulation of seed germination" evidence=IGI;IMP] [GO:0010313
"phytochrome binding" evidence=IDA] [GO:0009959 "negative
gravitropism" evidence=IMP;TAS] [GO:0010029 "regulation of seed
germination" evidence=TAS] [GO:0010099 "regulation of
photomorphogenesis" evidence=TAS] [GO:0003677 "DNA binding"
evidence=IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IMP] [GO:0009740 "gibberellic acid mediated
signaling pathway" evidence=RCA;IMP] [GO:0010100 "negative
regulation of photomorphogenesis" evidence=IMP] [GO:0010161 "red
light signaling pathway" evidence=IDA] [GO:0006783 "heme
biosynthetic process" evidence=IMP] [GO:0042802 "identical protein
binding" evidence=IPI] [GO:0009686 "gibberellin biosynthetic
process" evidence=RCA] [GO:0009845 "seed germination" evidence=RCA]
[GO:0048608 "reproductive structure development" evidence=RCA]
InterPro:IPR011598 InterPro:IPR024097 InterPro:IPR024102
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0010187 GO:GO:0006783 Gene3D:4.10.280.10
SUPFAM:SSF47459 PANTHER:PTHR10014 PANTHER:PTHR10014:SF30
GO:GO:0010161 EMBL:AC006081 HSSP:P61244 HOGENOM:HOG000240264
GO:GO:0015995 GO:GO:0010100 GO:GO:0009740 GO:GO:0009959
EMBL:AF488560 EMBL:AB103113 EMBL:AK228820 EMBL:BT029775
IPI:IPI00527244 IPI:IPI00537020 PIR:A84586 RefSeq:NP_001189559.1
RefSeq:NP_179608.2 RefSeq:NP_849996.1 UniGene:At.43003
UniGene:At.69322 ProteinModelPortal:Q8GZM7 SMR:Q8GZM7 IntAct:Q8GZM7
STRING:Q8GZM7 PRIDE:Q8GZM7 EnsemblPlants:AT2G20180.2
EnsemblPlants:AT2G20180.3 GeneID:816538 KEGG:ath:AT2G20180
TAIR:At2g20180 eggNOG:NOG264707 InParanoid:Q8GZM7 OMA:QEDEMTS
PhylomeDB:Q8GZM7 ProtClustDB:CLSN2690808 Genevestigator:Q8GZM7
GO:GO:0010313 Uniprot:Q8GZM7
Length = 478
Score = 180 (68.4 bits), Expect = 9.5e-11, P = 9.5e-11
Identities = 45/138 (32%), Positives = 67/138 (48%)
Query: 277 GKGKETAASPSVNNTTKVAEANASESSKNKRCKPNEGKANGNGAVKAEDEGXXXXXXXXX 336
G G +V T E + SS + + K N + + E E
Sbjct: 207 GGGAYNRKGKAVAMTAPAIEITGTSSSVVSKSEIEPEKTNVDDRKRKEREATTTDETESR 266
Query: 337 XXXXXXXXXYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLD 396
+R +A + H+L+ER RR++I+ERMK LQ+L+P CNK + KA MLD
Sbjct: 267 SEETKQARVST-TSTKRSRAAEVHNLSERKRRDRINERMKALQELIPRCNK-SDKASMLD 324
Query: 397 EIINYVQSLQRQVEFLSM 414
E I Y++SLQ Q++ +SM
Sbjct: 325 EAIEYMKSLQLQIQMMSM 342
>TAIR|locus:4010713916 [details] [associations]
symbol:AT4G28815 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0006355 GO:GO:0003677 GO:GO:0006351
EMBL:AL161573 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AL035353
PIR:H85335 PIR:T04518 EMBL:AJ577586 IPI:IPI00530422
RefSeq:NP_001078463.1 UniGene:At.71260 ProteinModelPortal:Q7XHI7
SMR:Q7XHI7 EnsemblPlants:AT4G28815.1 GeneID:5008171
KEGG:ath:AT4G28815 TAIR:At4g28815 eggNOG:NOG83291 PhylomeDB:Q7XHI7
Genevestigator:Q7XHI7 Uniprot:Q7XHI7
Length = 307
Score = 174 (66.3 bits), Expect = 1.3e-10, P = 1.3e-10
Identities = 54/147 (36%), Positives = 78/147 (53%)
Query: 352 RRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQV-E 410
+R +A + H+LAER RREKI+ERMK LQ L+P CNK T K ML+++I YV+SL+ Q+ +
Sbjct: 147 KRSRAAEMHNLAERRRREKINERMKTLQQLIPRCNKST-KVSMLEDVIEYVKSLEMQINQ 205
Query: 411 FLSMKLASVN---TRLELNVDALMSK--DIYQPNK-PLPH-SIFQ-----IDSSASAFFS 458
F+ +N + A M+ Y P + P P+ F + S S
Sbjct: 206 FMPHMAMGMNQPPAYIPFPSQAHMAGVGPSYPPPRYPFPNIQTFDPSRVWLQSPQPNPVS 265
Query: 459 HQPQQNPALHGN-ISNGTMTQCPVDPL 484
+QPQ NP +G + + M Q PL
Sbjct: 266 NQPQMNP--YGQFVGHHQMQQSLPPPL 290
>UNIPROTKB|Q7FA23 [details] [associations]
symbol:OSJNBa0058K23.6 "Os04g0618600 protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 InterPro:IPR024097 InterPro:IPR024102
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
GO:GO:0006355 Gene3D:4.10.280.10 SUPFAM:SSF47459 HSSP:P36956
PANTHER:PTHR10014 PANTHER:PTHR10014:SF30 EMBL:AP008210
EMBL:CM000141 EMBL:AL662970 RefSeq:NP_001053893.1 UniGene:Os.4548
EnsemblPlants:LOC_Os04g52770.1 GeneID:4337015 KEGG:osa:4337015
eggNOG:NOG275283 OMA:RSAEFHN ProtClustDB:CLSN2695118 Uniprot:Q7FA23
Length = 181
Score = 155 (59.6 bits), Expect = 2.1e-10, P = 2.1e-10
Identities = 30/63 (47%), Positives = 47/63 (74%)
Query: 352 RRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEF 411
RR ++ + H+ +ER RR++I+E++K LQ+L+P C K T K MLDE I+Y++SLQ Q++
Sbjct: 10 RRSRSAEFHNFSERRRRDRINEKLKALQELLPNCTK-TDKVSMLDEAIDYLKSLQLQLQM 68
Query: 412 LSM 414
L M
Sbjct: 69 LVM 71
>TAIR|locus:2141573 [details] [associations]
symbol:FBH2 "AT4G09180" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AL161514 HOGENOM:HOG000095218 ProtClustDB:CLSN2679906
EMBL:AF488613 EMBL:BT010423 EMBL:AK230384 IPI:IPI00545642
PIR:B85093 RefSeq:NP_192657.1 UniGene:At.33710
ProteinModelPortal:Q9M0R0 SMR:Q9M0R0 PaxDb:Q9M0R0 PRIDE:Q9M0R0
EnsemblPlants:AT4G09180.1 GeneID:826499 KEGG:ath:AT4G09180
TAIR:At4g09180 eggNOG:NOG277140 InParanoid:Q9M0R0 OMA:MENLMED
PhylomeDB:Q9M0R0 Genevestigator:Q9M0R0 Uniprot:Q9M0R0
Length = 262
Score = 168 (64.2 bits), Expect = 2.8e-10, P = 2.8e-10
Identities = 35/65 (53%), Positives = 49/65 (75%)
Query: 349 VRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQ 408
VRA+RG AT S+AERVRR +IS+R++ LQ+LVP +K T A ML+E + YV+ LQRQ
Sbjct: 184 VRAKRGCATHPRSIAERVRRTRISDRIRKLQELVPNMDKQTNTADMLEEAVEYVKVLQRQ 243
Query: 409 VEFLS 413
++ L+
Sbjct: 244 IQELT 248
>TAIR|locus:4010713915 [details] [associations]
symbol:AT4G28811 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0006355 GO:GO:0003677 GO:GO:0006351
EMBL:AL161573 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AL035353
HOGENOM:HOG000240264 EMBL:AJ519811 IPI:IPI00518617 PIR:H85335
PIR:T04518 RefSeq:NP_001078462.1 UniGene:At.46149
ProteinModelPortal:Q8GT73 SMR:Q8GT73 PRIDE:Q8GT73
EnsemblPlants:AT4G28811.1 GeneID:5008170 KEGG:ath:AT4G28811
TAIR:At4g28811 eggNOG:NOG314238 PhylomeDB:Q8GT73
ProtClustDB:CLSN2699107 Genevestigator:Q8GT73 Uniprot:Q8GT73
Length = 544
Score = 176 (67.0 bits), Expect = 3.4e-10, P = 3.4e-10
Identities = 34/63 (53%), Positives = 49/63 (77%)
Query: 352 RRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEF 411
+R +A D H+L+ER RRE+I+ERMK LQ+L+P C K T K ML+++I YV+SLQ Q++
Sbjct: 354 KRSRAADMHNLSERRRRERINERMKTLQELLPRCRK-TDKVSMLEDVIEYVKSLQLQIQM 412
Query: 412 LSM 414
+SM
Sbjct: 413 MSM 415
>TAIR|locus:2012345 [details] [associations]
symbol:PIF3 "AT1G09530" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS;IDA] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0009639 "response to red or far red
light" evidence=IMP] [GO:0010017 "red or far-red light signaling
pathway" evidence=RCA;IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0042802 "identical protein binding" evidence=IPI] [GO:0031539
"positive regulation of anthocyanin metabolic process"
evidence=IMP] [GO:0009740 "gibberellic acid mediated signaling
pathway" evidence=IMP] [GO:0009704 "de-etiolation" evidence=IMP]
[GO:0007623 "circadian rhythm" evidence=RCA] [GO:0009630
"gravitropism" evidence=RCA] [GO:0007165 "signal transduction"
evidence=TAS] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 EMBL:AC003970
GO:GO:0009585 Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0010017
GO:GO:0009704 GO:GO:0009740 GO:GO:0031539 EMBL:AF100166
EMBL:AF251693 EMBL:AF088280 EMBL:AK117255 EMBL:EF193482
EMBL:EF193483 EMBL:EF193484 EMBL:EF193485 EMBL:EF193486
EMBL:EF193487 EMBL:EF193488 EMBL:EF193489 EMBL:EF193490
EMBL:EF193491 EMBL:EF193492 EMBL:EF193493 EMBL:EF193494
EMBL:EF193495 EMBL:EF193496 IPI:IPI00530297 PIR:H86228
RefSeq:NP_172424.1 RefSeq:NP_849626.1 UniGene:At.10926
ProteinModelPortal:O80536 SMR:O80536 DIP:DIP-33892N IntAct:O80536
STRING:O80536 EnsemblPlants:AT1G09530.1 EnsemblPlants:AT1G09530.2
GeneID:837479 KEGG:ath:AT1G09530 TAIR:At1g09530 eggNOG:NOG285764
InParanoid:O80536 KO:K12126 OMA:WENGQIS PhylomeDB:O80536
ProtClustDB:CLSN2679266 Genevestigator:O80536 GermOnline:AT1G09530
Uniprot:O80536
Length = 524
Score = 174 (66.3 bits), Expect = 5.2e-10, P = 5.2e-10
Identities = 33/64 (51%), Positives = 51/64 (79%)
Query: 351 ARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVE 410
++R ++ + H+L+ER RR++I+E+M+ LQ+L+P CNKV KA MLDE I Y++SLQ QV+
Sbjct: 339 SKRSRSAEVHNLSERRRRDRINEKMRALQELIPNCNKVD-KASMLDEAIEYLKSLQLQVQ 397
Query: 411 FLSM 414
+SM
Sbjct: 398 IMSM 401
>TAIR|locus:2008693 [details] [associations]
symbol:FBH1 "AT1G35460" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AF488612 EMBL:AC023064 EMBL:AF411791 EMBL:AY093794
IPI:IPI00538359 PIR:F86475 RefSeq:NP_174776.1 UniGene:At.18017
ProteinModelPortal:Q9C8P8 SMR:Q9C8P8 PRIDE:Q9C8P8
EnsemblPlants:AT1G35460.1 GeneID:840438 KEGG:ath:AT1G35460
TAIR:At1g35460 eggNOG:NOG263612 HOGENOM:HOG000095218
InParanoid:Q9C8P8 OMA:NLCLTEL PhylomeDB:Q9C8P8
ProtClustDB:CLSN2679906 Genevestigator:Q9C8P8 Uniprot:Q9C8P8
Length = 259
Score = 165 (63.1 bits), Expect = 6.0e-10, P = 6.0e-10
Identities = 34/65 (52%), Positives = 49/65 (75%)
Query: 349 VRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQ 408
VRA+RG AT S+AERVRR +IS+R++ LQ+LVP +K T A ML+E + YV++LQ Q
Sbjct: 181 VRAKRGCATHPRSIAERVRRTRISDRIRRLQELVPNMDKQTNTADMLEEAVEYVKALQSQ 240
Query: 409 VEFLS 413
++ L+
Sbjct: 241 IQELT 245
>UNIPROTKB|Q5VRS4 [details] [associations]
symbol:OSJNBa0015I14.14 "Basic helix-loop-helix protein
SPATULA-like" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598
InterPro:IPR024097 InterPro:IPR024102 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 GO:GO:0006355 EMBL:CM000143
Gene3D:4.10.280.10 SUPFAM:SSF47459 PANTHER:PTHR10014
PANTHER:PTHR10014:SF30 EMBL:AP002536 KEGG:dosa:Os06t0164400-01
Uniprot:Q5VRS4
Length = 315
Score = 167 (63.8 bits), Expect = 9.2e-10, P = 9.2e-10
Identities = 34/65 (52%), Positives = 48/65 (73%)
Query: 351 ARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVE 410
++R +A + H+L+E+ RR KI+E+MK LQ L+P NK T KA MLDE I Y++ LQ QV+
Sbjct: 99 SKRSRAAEVHNLSEKRRRSKINEKMKALQSLIPNSNK-TDKASMLDEAIEYLKQLQLQVQ 157
Query: 411 FLSMK 415
LSM+
Sbjct: 158 MLSMR 162
>TAIR|locus:2117788 [details] [associations]
symbol:AT4G28800 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 EMBL:AL161573
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AL035353 IPI:IPI00517558
IPI:IPI01020410 PIR:T04519 RefSeq:NP_194609.5 UniGene:At.71648
ProteinModelPortal:Q9SVU7 SMR:Q9SVU7 GeneID:829001
KEGG:ath:AT4G28800 TAIR:At4g28800 InParanoid:Q9SVU7
Genevestigator:Q9SVU7 Uniprot:Q9SVU7
Length = 445
Score = 169 (64.5 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 58/190 (30%), Positives = 88/190 (46%)
Query: 352 RRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEF 411
+R + + H+LAER RREKI+E+MK LQ L+P CNK T K LD+ I YV+SLQ Q++
Sbjct: 252 KRSRTAEMHNLAERRRREKINEKMKTLQQLIPRCNKST-KVSTLDDAIEYVKSLQSQIQG 310
Query: 412 LSMKLASVNTRLELNVDALMSKDIYQPNKPLPHSIFQIDSS-ASAFFSHQPQQNPALHGN 470
+ + + + M + P P P + F + + A S+ + P +
Sbjct: 311 MMSPMMNAGNTQQFMPHMAMDMNRPPPFIPFPGTSFPMPAQMAGVGPSYPAPRYPFPNIQ 370
Query: 471 ISNGTMTQCPVDPLDNALCRNLSMQLPQLEQFTETIPQFQNFGEDDLQSIVQMGF-GQNP 529
+ + + P P N + S Q PQ + QF G LQ F GQ
Sbjct: 371 TFDPSRVRLP-SPQPNPV----SNQ-PQFPAYMNPYSQFA--GPHQLQQPPPPPFQGQTT 422
Query: 530 NSETSLQSQS 539
+ +S Q+ S
Sbjct: 423 SQLSSGQASS 432
>TAIR|locus:2059979 [details] [associations]
symbol:FBH4 "AT2G42280" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0048573 "photoperiodism, flowering" evidence=IMP] [GO:0046685
"response to arsenic-containing substance" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AC002561 GO:GO:0048573
Gene3D:4.10.280.10 SUPFAM:SSF47459 eggNOG:NOG312535
HOGENOM:HOG000242890 EMBL:BT015339 EMBL:BT015712 EMBL:AK228981
IPI:IPI00530686 IPI:IPI00538142 PIR:T00937 RefSeq:NP_181757.2
RefSeq:NP_973670.1 UniGene:At.12448 UniGene:At.43726
ProteinModelPortal:Q66GR3 SMR:Q66GR3 PRIDE:Q66GR3
EnsemblPlants:AT2G42280.1 GeneID:818829 KEGG:ath:AT2G42280
TAIR:At2g42280 InParanoid:Q66GR3 OMA:NDNRANC PhylomeDB:Q66GR3
ProtClustDB:CLSN2681218 Genevestigator:Q66GR3 Uniprot:Q66GR3
Length = 359
Score = 167 (63.8 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 34/65 (52%), Positives = 48/65 (73%)
Query: 349 VRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQ 408
+RA+RG AT S+AERVRR +ISERM+ LQ+LVP +K T + MLD ++Y++ LQRQ
Sbjct: 279 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTSDMLDLAVDYIKDLQRQ 338
Query: 409 VEFLS 413
+ L+
Sbjct: 339 YKILN 343
>TAIR|locus:2026037 [details] [associations]
symbol:FBH3 "AT1G51140" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0048573 "photoperiodism, flowering" evidence=IMP]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 GO:GO:0048573 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AC079828 EMBL:AY034941 EMBL:AY063120
IPI:IPI00519239 PIR:H96548 RefSeq:NP_564583.1 UniGene:At.19155
ProteinModelPortal:Q9C690 SMR:Q9C690 PaxDb:Q9C690 PRIDE:Q9C690
EnsemblPlants:AT1G51140.1 GeneID:841537 KEGG:ath:AT1G51140
TAIR:At1g51140 eggNOG:NOG312535 HOGENOM:HOG000242890
InParanoid:Q9C690 OMA:TKDEDSA PhylomeDB:Q9C690
ProtClustDB:CLSN2917227 Genevestigator:Q9C690 Uniprot:Q9C690
Length = 379
Score = 167 (63.8 bits), Expect = 1.6e-09, P = 1.6e-09
Identities = 36/64 (56%), Positives = 45/64 (70%)
Query: 349 VRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQ 408
+RA+RG AT S+AERVRR KISERM+ LQDLVP + T A MLD + Y++ LQ Q
Sbjct: 304 IRAKRGCATHPRSIAERVRRTKISERMRKLQDLVPNMDTQTNTADMLDLAVQYIKDLQEQ 363
Query: 409 VEFL 412
V+ L
Sbjct: 364 VKAL 367
>UNIPROTKB|Q5NAE0 [details] [associations]
symbol:P0498A12.33 "Putative BP-5 protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AP003020
ProteinModelPortal:Q5NAE0 Gramene:Q5NAE0 Uniprot:Q5NAE0
Length = 565
Score = 168 (64.2 bits), Expect = 1.6e-09, Sum P(2) = 1.6e-09
Identities = 31/63 (49%), Positives = 49/63 (77%)
Query: 352 RRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEF 411
+R + + H+L+ER RR++I+E+M+ LQ+L+P CNK+ KA MLDE I Y+++LQ QV+
Sbjct: 309 KRSRTAEVHNLSERRRRDRINEKMRALQELIPNCNKID-KASMLDEAIEYLKTLQLQVQM 367
Query: 412 LSM 414
+SM
Sbjct: 368 MSM 370
Score = 46 (21.3 bits), Expect = 1.6e-09, Sum P(2) = 1.6e-09
Identities = 10/22 (45%), Positives = 12/22 (54%)
Query: 204 SRSNNNPNPMTANEKLPRVSSS 225
+R+ P P A KLPR S S
Sbjct: 113 TRAEPQPQPQLAAAKLPRSSGS 134
>TAIR|locus:2117773 [details] [associations]
symbol:AT4G28790 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 EMBL:AL161573
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AL035353 EMBL:BT015828
EMBL:BT020214 IPI:IPI00521625 IPI:IPI00529771 IPI:IPI00915578
PIR:T04520 RefSeq:NP_194608.3 RefSeq:NP_974634.1 UniGene:At.31988
ProteinModelPortal:Q9SVU6 SMR:Q9SVU6 PRIDE:Q9SVU6
EnsemblPlants:AT4G28790.1 GeneID:829000 KEGG:ath:AT4G28790
TAIR:At4g28790 HOGENOM:HOG000240264 InParanoid:Q9SVU6
PhylomeDB:Q9SVU6 ProtClustDB:CLSN2680993 Genevestigator:Q9SVU6
Uniprot:Q9SVU6
Length = 413
Score = 165 (63.1 bits), Expect = 3.2e-09, P = 3.2e-09
Identities = 46/167 (27%), Positives = 70/167 (41%)
Query: 250 ANXXXXXXXXXXXPNDFNSRKRKAVSKGKGKETAASPSVNNTTKVAEANASESSKNKRCK 309
+N P + R V+ G + T A P + K + + CK
Sbjct: 171 SNSTLLSSATESIPATHGTESRATVTGGVSR-TFAVPGLGPRGKAVAIETAGTQSWGLCK 229
Query: 310 PNEGKANGNGAVKAE--DEGXXXXXXXXXXXXXXXXXXYIHVRARRGQATDSHSLAERVR 367
A + + DE ++R +A H L+ER R
Sbjct: 230 AETEPVQRQPATETDITDERKRKTREETNVENQGTEEARDSTSSKRSRAAIMHKLSERRR 289
Query: 368 REKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSM 414
R+KI+E MK LQ+L+P C K T ++ MLD++I YV+SLQ Q++ SM
Sbjct: 290 RQKINEMMKALQELLPRCTK-TDRSSMLDDVIEYVKSLQSQIQMFSM 335
>TAIR|locus:2053733 [details] [associations]
symbol:PIF4 "AT2G43010" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS;IDA] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0005515
"protein binding" evidence=IPI] [GO:0010017 "red or far-red light
signaling pathway" evidence=RCA;IMP] [GO:0010161 "red light
signaling pathway" evidence=IGI] [GO:0009704 "de-etiolation"
evidence=IMP] [GO:0010600 "regulation of auxin biosynthetic
process" evidence=IDA] [GO:0010928 "regulation of auxin mediated
signaling pathway" evidence=IDA] [GO:0000165 "MAPK cascade"
evidence=RCA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=RCA] [GO:0006612 "protein targeting to
membrane" evidence=RCA] [GO:0007623 "circadian rhythm"
evidence=RCA] [GO:0009617 "response to bacterium" evidence=RCA]
[GO:0009630 "gravitropism" evidence=RCA] [GO:0009862 "systemic
acquired resistance, salicylic acid mediated signaling pathway"
evidence=RCA] [GO:0009867 "jasmonic acid mediated signaling
pathway" evidence=RCA] [GO:0010310 "regulation of hydrogen peroxide
metabolic process" evidence=RCA] [GO:0010363 "regulation of
plant-type hypersensitive response" evidence=RCA] [GO:0030003
"cellular cation homeostasis" evidence=RCA] [GO:0031348 "negative
regulation of defense response" evidence=RCA] [GO:0035304
"regulation of protein dephosphorylation" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 GO:GO:0009585 Gene3D:4.10.280.10
SUPFAM:SSF47459 GO:GO:0010161 GO:GO:0009704 GO:GO:0010928
EMBL:AC006224 EMBL:AJ440755 EMBL:AF251694 EMBL:AY142625
EMBL:AF360221 EMBL:EF193514 EMBL:EF193515 EMBL:EF193516
EMBL:EF193517 EMBL:EF193518 EMBL:EF193519 EMBL:EF193520
EMBL:EF193521 EMBL:EF193522 EMBL:EF193523 EMBL:EF193524
EMBL:EF193525 EMBL:EF193526 EMBL:EF193527 IPI:IPI00520232
IPI:IPI00534557 PIR:H84860 RefSeq:NP_565991.2 UniGene:At.19015
ProteinModelPortal:Q8W2F3 SMR:Q8W2F3 IntAct:Q8W2F3 STRING:Q8W2F3
EnsemblPlants:AT2G43010.1 GeneID:818903 KEGG:ath:AT2G43010
TAIR:At2g43010 eggNOG:NOG244119 InParanoid:Q8W2F3 KO:K16189
OMA:IRETEME PhylomeDB:Q8W2F3 ProtClustDB:CLSN2680212
Genevestigator:Q8W2F3 GermOnline:AT2G43010 GO:GO:0010600
Uniprot:Q8W2F3
Length = 430
Score = 165 (63.1 bits), Expect = 3.5e-09, P = 3.5e-09
Identities = 33/63 (52%), Positives = 50/63 (79%)
Query: 352 RRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEF 411
RR +A + H+L+ER RR++I+ERMK LQ+L+P C+K T KA +LDE I+Y++SLQ Q++
Sbjct: 254 RRSRAAEVHNLSERRRRDRINERMKALQELIPHCSK-TDKASILDEAIDYLKSLQLQLQV 312
Query: 412 LSM 414
+ M
Sbjct: 313 MWM 315
>UNIPROTKB|Q948F6 [details] [associations]
symbol:OSJNBa0049O12.18 "Putative SPATULA" species:4530
"Oryza sativa" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 InterPro:IPR024097 InterPro:IPR024102
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
GO:GO:0006355 Gene3D:4.10.280.10 SUPFAM:SSF47459 HSSP:P36956
PANTHER:PTHR10014 PANTHER:PTHR10014:SF30 EMBL:AC069158
ProteinModelPortal:Q948F6 Gramene:Q948F6 Genevestigator:Q948F6
Uniprot:Q948F6
Length = 298
Score = 160 (61.4 bits), Expect = 4.9e-09, P = 4.9e-09
Identities = 32/66 (48%), Positives = 48/66 (72%)
Query: 350 RARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQV 409
R +R +A + H+L+E+ RR +I+E+MK LQ L+P +K T KA MLD+ I Y++ LQ QV
Sbjct: 27 RGKRSRAAEVHNLSEKRRRSRINEKMKALQSLIPNSSK-TDKASMLDDAIEYLKQLQLQV 85
Query: 410 EFLSMK 415
+ LSM+
Sbjct: 86 QMLSMR 91
>UNIPROTKB|Q8GRJ1 [details] [associations]
symbol:OJ1343_B12.103 "Transcription factor BHLH9-like
protein" species:39947 "Oryza sativa Japonica Group" [GO:0005634
"nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10
SUPFAM:SSF47459 HSSP:P61244 EMBL:AP003824 EMBL:AP004010
Uniprot:Q8GRJ1
Length = 417
Score = 164 (62.8 bits), Expect = 9.9e-09, Sum P(2) = 9.9e-09
Identities = 33/63 (52%), Positives = 49/63 (77%)
Query: 352 RRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEF 411
RR +A + H+L+ER RR++I+E+++ LQ+LVP CNK T KA +LDE I Y++SLQ QV+
Sbjct: 225 RRTRAAEVHNLSERRRRDRINEKLRALQELVPHCNK-TDKASILDEAIEYLKSLQMQVQI 283
Query: 412 LSM 414
+ M
Sbjct: 284 MWM 286
Score = 38 (18.4 bits), Expect = 9.9e-09, Sum P(2) = 9.9e-09
Identities = 9/23 (39%), Positives = 12/23 (52%)
Query: 431 MSKDIYQPNKPLPHSIFQIDSSA 453
M + Y N LP+ + QI S A
Sbjct: 325 MQRTTYYMNNSLPNQMPQIPSPA 347
>UNIPROTKB|Q2QMV9 [details] [associations]
symbol:LOC_Os12g39850 "Helix-loop-helix DNA-binding domain
containing protein" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 GO:GO:0003677
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:DP000011 EMBL:CM000149
KEGG:dosa:Os12t0589000-00 OMA:DESEMMA Uniprot:Q2QMV9
Length = 304
Score = 157 (60.3 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 67/241 (27%), Positives = 103/241 (42%)
Query: 206 SNNNPNPMTANEKLPRVSSSPSLKVLG-SQAQATGNKSP---QDRSELANXXXXXXXXXX 261
SN+N + + A + S S + LG S + A + S Q +E N
Sbjct: 68 SNSNASSIPAPSEYEGYCFSDSNEALGVSSSIAPHDLSMVQVQGATEFLNVIPNHSLDSF 127
Query: 262 XPNDFNSRKRKAVSKGKGKETAASPSVNNTTKVAE-ANASESSKNKRCKPNEGK----AN 316
+ +VS ++ +A + T+ ++ A +E + K+ K K A
Sbjct: 128 GNGELGHEDLDSVSGTNKRKQSAEGEFDGQTRGSKCARKAEPKRAKKAKQTVEKDASVAI 187
Query: 317 GNGAVKAEDEGXXXXXXXXXXXXXXXXXXYIHVRARRGQATDSHSLAERVRREKISERMK 376
NG+ D RA RG ATD SL R RRE+I+ER+K
Sbjct: 188 PNGSCSISDNDSSSSQEVADAGATSKGKS----RAGRGAATDPQSLYARKRRERINERLK 243
Query: 377 LLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMK-------LA--SVNTRLELNV 427
LQ+LVP KV + ML+E ++YV+ LQ Q++ LS +A +N L+LN+
Sbjct: 244 TLQNLVPNGTKVD-ISTMLEEAVHYVKFLQLQIKLLSSDEMWMYAPIAYNGMNIGLDLNI 302
Query: 428 D 428
D
Sbjct: 303 D 303
>TAIR|locus:2155503 [details] [associations]
symbol:ALC "AT5G67110" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;ISS;IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0010047 "fruit dehiscence" evidence=IMP]
InterPro:IPR011598 InterPro:IPR024097 InterPro:IPR024102
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0010047 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AB020742 EMBL:BT028946 EMBL:AF488605 IPI:IPI00537617
IPI:IPI00846166 IPI:IPI00846501 RefSeq:NP_001078810.1
RefSeq:NP_001078811.1 RefSeq:NP_201512.1 UniGene:At.28825
HSSP:P36956 ProteinModelPortal:Q9FHA2 SMR:Q9FHA2 IntAct:Q9FHA2
STRING:Q9FHA2 EnsemblPlants:AT5G67110.1 GeneID:836846
KEGG:ath:AT5G67110 TAIR:At5g67110 eggNOG:NOG329583
HOGENOM:HOG000033902 InParanoid:Q9FHA2 OMA:HTRINET PhylomeDB:Q9FHA2
ProtClustDB:CLSN2686902 Genevestigator:Q9FHA2 PANTHER:PTHR10014
PANTHER:PTHR10014:SF30 Uniprot:Q9FHA2
Length = 210
Score = 147 (56.8 bits), Expect = 1.5e-08, P = 1.5e-08
Identities = 40/109 (36%), Positives = 59/109 (54%)
Query: 360 HSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLS------ 413
H+L+E+ RR KI+E+MK LQ L+P NK T KA MLDE I Y++ LQ QV+ L+
Sbjct: 98 HNLSEKKRRSKINEKMKALQKLIPNSNK-TDKASMLDEAIEYLKQLQLQVQTLAVMNGLG 156
Query: 414 ---MKLASVNTRLELNVDALMSKDI-YQPNKPLPHSIFQIDSSASAFFS 458
M+L V ++ + +D+ + PHS+ +S FS
Sbjct: 157 LNPMRLPQVPPPTHTRINETLEQDLNLETLLAAPHSLEPAKTSQGMCFS 205
>TAIR|locus:2115080 [details] [associations]
symbol:SPT "AT4G36930" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0009908 "flower
development" evidence=NAS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS;TAS]
[GO:0009409 "response to cold" evidence=IMP] [GO:0010114 "response
to red light" evidence=IMP] [GO:0010187 "negative regulation of
seed germination" evidence=IMP] [GO:0010154 "fruit development"
evidence=IMP] [GO:0048440 "carpel development" evidence=IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0007623 "circadian
rhythm" evidence=IEP] InterPro:IPR011598 InterPro:IPR024097
InterPro:IPR024102 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003677
GO:GO:0007623 GO:GO:0009409 GO:GO:0003700 GO:GO:0006351
GO:GO:0010114 GO:GO:0010187 GO:GO:0048440 GO:GO:0010154
Gene3D:4.10.280.10 SUPFAM:SSF47459 PANTHER:PTHR10014
PANTHER:PTHR10014:SF30 EMBL:Z99707 EMBL:AL161590 EMBL:AF319540
EMBL:AK229267 EMBL:BT026462 IPI:IPI00541204 PIR:B85436
RefSeq:NP_568010.1 UniGene:At.4639 ProteinModelPortal:Q9FUA4
SMR:Q9FUA4 IntAct:Q9FUA4 STRING:Q9FUA4 EnsemblPlants:AT4G36930.1
GeneID:829847 KEGG:ath:AT4G36930 TAIR:At4g36930 eggNOG:NOG276771
HOGENOM:HOG000090429 InParanoid:Q9FUA4 OMA:NAPEMIN PhylomeDB:Q9FUA4
ProtClustDB:CLSN2917674 Genevestigator:Q9FUA4 GermOnline:AT4G36930
Uniprot:Q9FUA4
Length = 373
Score = 158 (60.7 bits), Expect = 1.6e-08, P = 1.6e-08
Identities = 32/65 (49%), Positives = 48/65 (73%)
Query: 351 ARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVE 410
++R +A + H+L+E+ RR +I+E+MK LQ L+P NK T KA MLDE I Y++ LQ QV+
Sbjct: 193 SKRCRAAEVHNLSEKRRRSRINEKMKALQSLIPNSNK-TDKASMLDEAIEYLKQLQLQVQ 251
Query: 411 FLSMK 415
L+M+
Sbjct: 252 MLTMR 256
>TAIR|locus:2041369 [details] [associations]
symbol:PIL1 "phytochrome interacting factor 3-like 1"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0009641 "shade
avoidance" evidence=IEP] [GO:0010017 "red or far-red light
signaling pathway" evidence=IEP;IMP] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 EMBL:AC004411 Gene3D:4.10.280.10 SUPFAM:SSF47459
GO:GO:0010017 GO:GO:0009641 HOGENOM:HOG000115543
ProtClustDB:CLSN2680935 EMBL:AB090873 EMBL:AY219127 EMBL:AY954840
IPI:IPI00545843 PIR:T02190 RefSeq:NP_182220.2 UniGene:At.36425
ProteinModelPortal:Q8L5W8 SMR:Q8L5W8 IntAct:Q8L5W8 STRING:Q8L5W8
PRIDE:Q8L5W8 EnsemblPlants:AT2G46970.1 GeneID:819311
KEGG:ath:AT2G46970 TAIR:At2g46970 eggNOG:NOG291407
InParanoid:Q8L5W8 OMA:MELVCEN PhylomeDB:Q8L5W8
Genevestigator:Q8L5W8 Uniprot:Q8L5W8
Length = 416
Score = 157 (60.3 bits), Expect = 2.6e-08, P = 2.6e-08
Identities = 49/153 (32%), Positives = 81/153 (52%)
Query: 347 IHVRAR-----RGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINY 401
+H R R R ++T+ H L ER RR++ +++M+ LQDL+P C K KA +LDE I Y
Sbjct: 216 VHARTRKPVTKRKRSTEVHKLYERKRRDEFNKKMRALQDLLPNCYK-DDKASLLDEAIKY 274
Query: 402 VQSLQRQVEFLSMKLASVN--TRLELNVDALMSKDIYQPNKPLPHSIFQ---IDSSASAF 456
+++LQ QV+ +SM + T L + + M ++ P SI Q ++ A+ F
Sbjct: 275 MRTLQLQVQMMSMGNGLIRPPTMLPMGHYSPMGLGMHMGAAATPTSIPQFLPMNVQATGF 334
Query: 457 --FSHQPQQNPALHGNISNGTMTQCPV-DPLDN 486
++ P Q + N +G + P+ PL+N
Sbjct: 335 PGMNNAPPQMLSFL-NHPSGLIPNTPIFSPLEN 366
>TAIR|locus:2126876 [details] [associations]
symbol:UNE10 "AT4G00050" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;TAS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0009567
"double fertilization forming a zygote and endosperm" evidence=IMP]
[GO:0009506 "plasmodesma" evidence=IDA] InterPro:IPR011598
InterPro:IPR024097 InterPro:IPR024102 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0009506 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:4.10.280.10 SUPFAM:SSF47459 PANTHER:PTHR10014
PANTHER:PTHR10014:SF30 EMBL:AL161471 HSSP:P22415 GO:GO:0009567
EMBL:AF069299 EMBL:AF488561 EMBL:AK117229 EMBL:BT025971
IPI:IPI00517893 PIR:T01333 RefSeq:NP_191916.3 UniGene:At.44779
ProteinModelPortal:Q8GZ38 SMR:Q8GZ38 IntAct:Q8GZ38
EnsemblPlants:AT4G00050.1 GeneID:828175 KEGG:ath:AT4G00050
TAIR:At4g00050 eggNOG:NOG239145 HOGENOM:HOG000084918
InParanoid:Q8GZ38 OMA:MMSRMNM PhylomeDB:Q8GZ38
ProtClustDB:CLSN2690671 Genevestigator:Q8GZ38 Uniprot:Q8GZ38
Length = 399
Score = 156 (60.0 bits), Expect = 3.0e-08, P = 3.0e-08
Identities = 35/72 (48%), Positives = 49/72 (68%)
Query: 349 VRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQ 408
V +R +A H+ +ER RR+KI++RMK LQ LVP +K T KA MLDE+I Y++ LQ Q
Sbjct: 207 VSTKRSRAAAIHNQSERKRRDKINQRMKTLQKLVPNSSK-TDKASMLDEVIEYLKQLQAQ 265
Query: 409 VEFLS-MKLASV 419
V +S M + S+
Sbjct: 266 VSMMSRMNMPSM 277
>TAIR|locus:2199221 [details] [associations]
symbol:RSL4 "AT1G27740" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS;TAS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0009733 "response to auxin stimulus" evidence=IEP] [GO:0016049
"cell growth" evidence=IMP] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IMP] [GO:0048766 "root hair
initiation" evidence=IMP] [GO:0048765 "root hair cell
differentiation" evidence=RCA] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0045893 GO:GO:0009733
GO:GO:0003677 GO:GO:0016049 GO:GO:0003700 GO:GO:0006351
EMBL:AC012375 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AY085436
IPI:IPI00523669 PIR:B86402 RefSeq:NP_564293.1 UniGene:At.41015
ProteinModelPortal:Q8LEG1 SMR:Q8LEG1 EnsemblPlants:AT1G27740.1
GeneID:839667 KEGG:ath:AT1G27740 TAIR:At1g27740 eggNOG:NOG244031
HOGENOM:HOG000240244 InParanoid:Q8LEG1 OMA:DESNTNW PhylomeDB:Q8LEG1
ProtClustDB:CLSN2688032 Genevestigator:Q8LEG1 GO:GO:0048766
Uniprot:Q8LEG1
Length = 258
Score = 149 (57.5 bits), Expect = 5.2e-08, P = 5.2e-08
Identities = 34/64 (53%), Positives = 45/64 (70%)
Query: 350 RARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQV 409
RA +G ATD SL R RREKI+ER+K LQ+LVP KV + ML+E ++YV+ LQ Q+
Sbjct: 168 RATKGTATDPQSLYARKRREKINERLKTLQNLVPNGTKVD-ISTMLEEAVHYVKFLQLQI 226
Query: 410 EFLS 413
+ LS
Sbjct: 227 KLLS 230
>TAIR|locus:2118934 [details] [associations]
symbol:RSL2 "AT4G33880" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0009733 "response to auxin stimulus" evidence=IEP] [GO:0016049
"cell growth" evidence=IMP] [GO:0048766 "root hair initiation"
evidence=IMP] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0009733 GO:GO:0003677 GO:GO:0016049 GO:GO:0003700
GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AL031032
EMBL:AL161584 HOGENOM:HOG000240244 GO:GO:0048766 EMBL:AF488616
EMBL:BT003137 EMBL:AK228110 IPI:IPI00526320 PIR:T05216
RefSeq:NP_195114.2 UniGene:At.31542 ProteinModelPortal:Q84WK0
SMR:Q84WK0 EnsemblPlants:AT4G33880.1 GeneID:829531
KEGG:ath:AT4G33880 TAIR:At4g33880 eggNOG:NOG318365
InParanoid:Q84WK0 OMA:TINTNSY PhylomeDB:Q84WK0
ProtClustDB:CLSN2680247 Genevestigator:Q84WK0 Uniprot:Q84WK0
Length = 352
Score = 149 (57.5 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 33/64 (51%), Positives = 46/64 (71%)
Query: 350 RARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQV 409
RA RG ATD SL R RRE+I+ER+++LQ+LVP KV + ML+E ++YV+ LQ Q+
Sbjct: 267 RASRGAATDPQSLYARKRRERINERLRILQNLVPNGTKVD-ISTMLEEAVHYVKFLQLQI 325
Query: 410 EFLS 413
+ LS
Sbjct: 326 KLLS 329
Score = 40 (19.1 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 12/48 (25%), Positives = 25/48 (52%)
Query: 281 ETAASPSVNNTTKVAEANASESSKNKRCKPNEGKANGNGAVKAED-EG 327
E + + + + T + A+ + KNKR + N+ +A N + ++ EG
Sbjct: 158 EISVTTTKSLTGSKKRSRATSTDKNKRARVNK-RAQKNVEMSGDNNEG 204
>UNIPROTKB|Q7XT55 [details] [associations]
symbol:OSJNBa0084K20.3 "OSJNBa0076N16.1 protein"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:CM000141 EMBL:AL606613 EMBL:AL731617 Uniprot:Q7XT55
Length = 218
Score = 141 (54.7 bits), Expect = 1.8e-07, P = 1.8e-07
Identities = 30/64 (46%), Positives = 45/64 (70%)
Query: 349 VRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQ 408
VRA+RG AT S+AER RR +ISE+++ LQ LVP +K T + MLD +++++ LQ Q
Sbjct: 134 VRAKRGCATHPRSIAERERRTRISEKLRKLQALVPNMDKQTSTSDMLDLAVDHIKGLQSQ 193
Query: 409 VEFL 412
++ L
Sbjct: 194 LQTL 197
>UNIPROTKB|Q6Z9R3 [details] [associations]
symbol:P0461F06.33 "BHLH protein family-like" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:CM000145
eggNOG:NOG315110 EMBL:AP004693 EnsemblPlants:LOC_Os08g36740.1
OMA:SAMREMI Uniprot:Q6Z9R3
Length = 246
Score = 141 (54.7 bits), Expect = 3.7e-07, P = 3.7e-07
Identities = 33/65 (50%), Positives = 47/65 (72%)
Query: 356 ATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMK 415
+TD S+A R+RRE+ISER+++LQ LVPG K+ A MLDE I+YV+ L+ QV+ L +
Sbjct: 158 STDPQSVAARMRRERISERIRILQRLVPGGTKMD-TASMLDEAIHYVKFLKTQVQSLE-R 215
Query: 416 LASVN 420
A+ N
Sbjct: 216 AAAAN 220
>UNIPROTKB|Q2QMM0 [details] [associations]
symbol:LOC_Os12g40710 "Helix-loop-helix DNA-binding domain
containing protein" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598
InterPro:IPR024097 InterPro:IPR024102 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 GO:GO:0006355 GO:GO:0003677
Gene3D:4.10.280.10 SUPFAM:SSF47459 PANTHER:PTHR10014
PANTHER:PTHR10014:SF30 EMBL:DP000011 Gramene:Q2QMM0 Uniprot:Q2QMM0
Length = 266
Score = 141 (54.7 bits), Expect = 5.7e-07, Sum P(2) = 5.7e-07
Identities = 29/63 (46%), Positives = 42/63 (66%)
Query: 351 ARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVE 410
+R A +H+L E+ RR KI+ER + LQ LVPGC+ + +A LD+ I Y++SLQ Q+E
Sbjct: 78 SRHRHAAGAHNLTEKRRRFKITERFRTLQRLVPGCDNKSNQASTLDQTIQYMKSLQHQLE 137
Query: 411 FLS 413
S
Sbjct: 138 ATS 140
Score = 37 (18.1 bits), Expect = 5.7e-07, Sum P(2) = 5.7e-07
Identities = 11/51 (21%), Positives = 22/51 (43%)
Query: 270 KRKAVSKGKGKETAASPSVNNTTKVAEANASESSKNKRCKPNEGKANGNGA 320
+R A + K+ P+V + T + + +S + K+ K A G +
Sbjct: 28 RRAAPPAPEKKQMDNMPAVASPTMNKDEASDDSGERKKKKKKASSAAGKAS 78
>TAIR|locus:2074865 [details] [associations]
symbol:HEC2 "AT3G50330" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0010500 "transmitting tissue development" evidence=IGI]
[GO:0048462 "carpel formation" evidence=IMP] [GO:0080126 "ovary
septum development" evidence=IGI] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AL132976
HOGENOM:HOG000242863 ProtClustDB:CLSN2684406 GO:GO:0048462
GO:GO:0010500 EMBL:BT010607 EMBL:AK175679 EMBL:AK175912
EMBL:AK176020 IPI:IPI00532987 PIR:T45579 RefSeq:NP_190602.1
UniGene:At.35505 ProteinModelPortal:Q9SND4 SMR:Q9SND4 IntAct:Q9SND4
EnsemblPlants:AT3G50330.1 GeneID:824195 KEGG:ath:AT3G50330
TAIR:At3g50330 eggNOG:NOG315110 InParanoid:Q9SND4 OMA:NANMAAM
PhylomeDB:Q9SND4 Genevestigator:Q9SND4 GO:GO:0080126 Uniprot:Q9SND4
Length = 231
Score = 132 (51.5 bits), Expect = 8.1e-07, Sum P(2) = 8.1e-07
Identities = 33/63 (52%), Positives = 45/63 (71%)
Query: 358 DSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMKLA 417
D S+A R RRE+ISER+++LQ LVPG K+ A MLDE I+YV+ L++QV+ L + A
Sbjct: 128 DPQSVAARHRRERISERIRILQRLVPGGTKMD-TASMLDEAIHYVKFLKKQVQSLE-EHA 185
Query: 418 SVN 420
VN
Sbjct: 186 VVN 188
Score = 42 (19.8 bits), Expect = 8.1e-07, Sum P(2) = 8.1e-07
Identities = 9/15 (60%), Positives = 10/15 (66%)
Query: 198 PDQFGLSRSNNNPNP 212
P+ F S SN NPNP
Sbjct: 19 PEHF--SNSNPNPNP 31
Score = 38 (18.4 bits), Expect = 2.1e-06, Sum P(2) = 2.1e-06
Identities = 7/11 (63%), Positives = 8/11 (72%)
Query: 206 SNNNPNPMTAN 216
SN+NPNP N
Sbjct: 23 SNSNPNPNPHN 33
>TAIR|locus:505006103 [details] [associations]
symbol:AT1G05805 "AT1G05805" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0005829 "cytosol" evidence=IDA] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005829 GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AC009999 HOGENOM:HOG000242890 EMBL:BT000954 EMBL:AY086106
IPI:IPI00516925 PIR:F86192 RefSeq:NP_563749.1 UniGene:At.11933
ProteinModelPortal:Q8H102 SMR:Q8H102 IntAct:Q8H102 STRING:Q8H102
PaxDb:Q8H102 PRIDE:Q8H102 EnsemblPlants:AT1G05805.1 GeneID:837090
KEGG:ath:AT1G05805 TAIR:At1g05805 eggNOG:NOG249421
InParanoid:Q8H102 OMA:NEVNETP PhylomeDB:Q8H102
ProtClustDB:CLSN2687697 Genevestigator:Q8H102 Uniprot:Q8H102
Length = 362
Score = 142 (55.0 bits), Expect = 9.0e-07, P = 9.0e-07
Identities = 30/64 (46%), Positives = 44/64 (68%)
Query: 349 VRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQ 408
+RA+RG AT S+AER RR +IS ++K LQDLVP +K T + MLD + +++ LQ Q
Sbjct: 283 IRAKRGCATHPRSIAERERRTRISGKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQHQ 342
Query: 409 VEFL 412
++ L
Sbjct: 343 LQNL 346
>TAIR|locus:504954900 [details] [associations]
symbol:AT5G43175 "AT5G43175" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AB008267 HOGENOM:HOG000240244 ProtClustDB:CLSN2688032
IPI:IPI00519888 RefSeq:NP_680385.1 UniGene:At.55333
ProteinModelPortal:Q3E7L7 SMR:Q3E7L7 EnsemblPlants:AT5G43175.1
GeneID:834335 KEGG:ath:AT5G43175 TAIR:At5g43175 eggNOG:NOG323547
InParanoid:Q3E7L7 OMA:MENEAFV PhylomeDB:Q3E7L7
Genevestigator:Q3E7L7 Uniprot:Q3E7L7
Length = 223
Score = 134 (52.2 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 30/64 (46%), Positives = 44/64 (68%)
Query: 350 RARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQV 409
+A RG A+D SL R RRE+I++R+K LQ LVP KV + ML++ ++YV+ LQ Q+
Sbjct: 133 KANRGIASDPQSLYARKRRERINDRLKTLQSLVPNGTKVD-ISTMLEDAVHYVKFLQLQI 191
Query: 410 EFLS 413
+ LS
Sbjct: 192 KLLS 195
>UNIPROTKB|Q67TR8 [details] [associations]
symbol:B1342C04.6 "Basic helix-loop-helix (BHLH)-like
protein" species:39947 "Oryza sativa Japonica Group" [GO:0005634
"nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AP008215 EMBL:AP005655 EMBL:AP006057
EMBL:AK060477 EMBL:AK070458 RefSeq:NP_001063357.1 UniGene:Os.51063
EnsemblPlants:LOC_Os09g28210.1 GeneID:4347252 KEGG:osa:4347252
OMA:AYPAFHA ProtClustDB:CLSN2697769 Uniprot:Q67TR8
Length = 236
Score = 134 (52.2 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 31/61 (50%), Positives = 43/61 (70%)
Query: 358 DSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMKLA 417
D S+A R+RRE+ISER+++LQ LVPG K+ A MLDE I+YV+ L+ QV+ L A
Sbjct: 150 DPQSVAARLRRERISERIRILQRLVPGGTKMD-TASMLDEAIHYVKFLKSQVQSLERAAA 208
Query: 418 S 418
+
Sbjct: 209 A 209
>TAIR|locus:2144791 [details] [associations]
symbol:HEC3 "AT5G09750" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0010500 "transmitting tissue development" evidence=IGI]
[GO:0048462 "carpel formation" evidence=IMP] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AB020752
EMBL:AL353994 GO:GO:0048462 GO:GO:0010500 IPI:IPI00522404
PIR:T49923 RefSeq:NP_196537.1 UniGene:At.65500
ProteinModelPortal:Q9LXD8 SMR:Q9LXD8 IntAct:Q9LXD8 STRING:Q9LXD8
EnsemblPlants:AT5G09750.1 GeneID:830835 KEGG:ath:AT5G09750
TAIR:At5g09750 eggNOG:NOG238444 HOGENOM:HOG000210013
InParanoid:Q9LXD8 OMA:NDPIGMA ProtClustDB:CLSN2916890
Genevestigator:Q9LXD8 Uniprot:Q9LXD8
Length = 224
Score = 133 (51.9 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 30/56 (53%), Positives = 40/56 (71%)
Query: 358 DSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLS 413
D S+A R RRE+ISER+++LQ LVPG K+ A MLDE I YV+ L+RQ+ L+
Sbjct: 128 DPQSVAARHRRERISERIRILQRLVPGGTKMD-TASMLDEAIRYVKFLKRQIRLLN 182
>UNIPROTKB|Q9ASJ3 [details] [associations]
symbol:P0439B06.24 "Putative uncharacterized protein
P0439B06.24" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AP002882 UniGene:Os.30617
ProteinModelPortal:Q9ASJ3 Gramene:Q9ASJ3 OMA:KAITYVK
ProtClustDB:CLSN2918925 Uniprot:Q9ASJ3
Length = 294
Score = 136 (52.9 bits), Expect = 2.6e-06, P = 2.6e-06
Identities = 45/141 (31%), Positives = 67/141 (47%)
Query: 277 GKGKETAASPSVNNTTKVAEANASE----SSKNKRCKPNEGKANGNGAVKAEDEGXXXXX 332
G G + S V+N ++ E+N S+ ++K + C E +A G + +G
Sbjct: 130 GFGLASPGSSVVDNGLEIHESNVSKPPPPAAKKRACPSGEARAAGKKQCR---KGSKPNK 186
Query: 333 XXXXXXXXXXXXXYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKA 392
+ Q S A +VRRE+ISER+K+LQDLVP KV
Sbjct: 187 AASASSPSPSPSPSPSPNKEQPQ-----SAAAKVRRERISERLKVLQDLVPNGTKVD-LV 240
Query: 393 LMLDEIINYVQSLQRQVEFLS 413
ML++ INYV+ LQ QV+ L+
Sbjct: 241 TMLEKAINYVKFLQLQVKVLA 261
>UNIPROTKB|Q2QMN2 [details] [associations]
symbol:LOC_Os12g40590 "Helix-loop-helix DNA-binding domain
containing protein, expressed" species:39947 "Oryza sativa Japonica
Group" [GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598
InterPro:IPR024097 InterPro:IPR024102 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 GO:GO:0006355 GO:GO:0003677
Gene3D:4.10.280.10 SUPFAM:SSF47459 PANTHER:PTHR10014
PANTHER:PTHR10014:SF30 EMBL:DP000011 EMBL:CM000149 eggNOG:NOG272270
KEGG:dosa:Os12t0597800-01 Uniprot:Q2QMN2
Length = 265
Score = 134 (52.2 bits), Expect = 3.2e-06, P = 3.2e-06
Identities = 27/62 (43%), Positives = 45/62 (72%)
Query: 350 RARRGQA-TDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQ 408
+ARR ++H L E+ RR +I+E+ K+LQ LVPGC+K + ++ LD I+Y++SLQ+Q
Sbjct: 146 KARRNPGYAETHGLTEKRRRSRINEKFKMLQRLVPGCDKCS-QSSTLDRTIHYMKSLQQQ 204
Query: 409 VE 410
++
Sbjct: 205 LQ 206
>TAIR|locus:2163163 [details] [associations]
symbol:PIF7 "AT5G61270" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS;IDA] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0003690 "double-stranded DNA binding" evidence=IDA] [GO:0009416
"response to light stimulus" evidence=IDA] [GO:0009704
"de-etiolation" evidence=IMP] [GO:0016607 "nuclear speck"
evidence=IDA] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0016607
GO:GO:0003700 GO:GO:0006351 GO:GO:0003690 GO:GO:0009585
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AB010073 HSSP:P22415
GO:GO:0009704 EMBL:AF488604 EMBL:BX831447 EMBL:AY568656
EMBL:AJ630484 EMBL:AK220640 IPI:IPI00537261 IPI:IPI00656604
RefSeq:NP_001032117.1 RefSeq:NP_200935.2 UniGene:At.29114
ProteinModelPortal:Q570R7 SMR:Q570R7 IntAct:Q570R7 STRING:Q570R7
EnsemblPlants:AT5G61270.1 GeneID:836248 KEGG:ath:AT5G61270
TAIR:At5g61270 eggNOG:NOG286182 HOGENOM:HOG000097081
InParanoid:Q9FLK6 OMA:HNESERR PhylomeDB:Q570R7
ProtClustDB:CLSN2681114 Genevestigator:Q570R7 Uniprot:Q570R7
Length = 366
Score = 139 (54.0 bits), Expect = 4.0e-06, Sum P(2) = 4.0e-06
Identities = 27/64 (42%), Positives = 47/64 (73%)
Query: 352 RRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEF 411
RRG+A H+ +ER RR++I++RM+ LQ L+P +K K +LD++I +++ LQ QV+F
Sbjct: 163 RRGRAAAIHNESERRRRDRINQRMRTLQKLLPTASKAD-KVSILDDVIEHLKQLQAQVQF 221
Query: 412 LSMK 415
+S++
Sbjct: 222 MSLR 225
Score = 38 (18.4 bits), Expect = 4.0e-06, Sum P(2) = 4.0e-06
Identities = 18/66 (27%), Positives = 28/66 (42%)
Query: 466 ALHGNISNGTMT-QCPVDPLDNALCRNLSMQLPQLEQFTETIPQFQNFGEDDLQSIVQMG 524
+L N+ M Q P P + L ++ Q Q +Q + Q Q F L ++ +MG
Sbjct: 223 SLRANLPQQMMIPQLP--PPQSVL--SIQHQQQQQQQQQQQQQQQQQFQMSLLATMARMG 278
Query: 525 FGQNPN 530
G N
Sbjct: 279 MGGGGN 284
>TAIR|locus:2155543 [details] [associations]
symbol:HEC1 "HECATE 1" species:3702 "Arabidopsis
thaliana" [GO:0005634 "nucleus" evidence=ISM] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] [GO:0010500 "transmitting tissue
development" evidence=IGI] [GO:0048462 "carpel formation"
evidence=IMP] [GO:0048445 "carpel morphogenesis" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AB020742 EMBL:AF488618 EMBL:AK228927 IPI:IPI00530790
RefSeq:NP_201507.1 UniGene:At.28829 ProteinModelPortal:Q9FHA7
SMR:Q9FHA7 IntAct:Q9FHA7 EnsemblPlants:AT5G67060.1 GeneID:836841
KEGG:ath:AT5G67060 TAIR:At5g67060 eggNOG:NOG267961
HOGENOM:HOG000242863 InParanoid:Q9FHA7 OMA:FLFNSTH PhylomeDB:Q9FHA7
ProtClustDB:CLSN2684406 Genevestigator:Q9FHA7 GO:GO:0048462
GO:GO:0010500 Uniprot:Q9FHA7
Length = 241
Score = 131 (51.2 bits), Expect = 5.2e-06, P = 5.2e-06
Identities = 30/55 (54%), Positives = 41/55 (74%)
Query: 358 DSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFL 412
D S+A R RRE+ISER+++LQ LVPG K+ A MLDE I+YV+ L++QV+ L
Sbjct: 131 DPQSVAARHRRERISERIRILQRLVPGGTKMD-TASMLDEAIHYVKFLKKQVQSL 184
>UNIPROTKB|Q94LR3 [details] [associations]
symbol:OSJNBa0010C11.7 "Helix-loop-helix DNA-binding domain
containing protein, expressed" species:39947 "Oryza sativa Japonica
Group" [GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
GO:GO:0003677 EMBL:DP000086 EMBL:AP008216 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AC069300 RefSeq:NP_001065353.1
UniGene:Os.27587 IntAct:Q94LR3 STRING:Q94LR3 GeneID:4349351
KEGG:osa:4349351 ProtClustDB:CLSN2714538 Uniprot:Q94LR3
Length = 191
Score = 126 (49.4 bits), Expect = 5.7e-06, P = 5.7e-06
Identities = 30/73 (41%), Positives = 49/73 (67%)
Query: 367 RREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLS------MKLASVN 420
RR++I+++MK LQ LVP +K T KA MLDE+I+Y++ LQ QV+ +S M +
Sbjct: 13 RRDRINQKMKTLQKLVPNSSK-TDKASMLDEVIDYLKQLQAQVQVMSRMGSMMMPMGMAM 71
Query: 421 TRLELNVDALMSK 433
+L+++V A M++
Sbjct: 72 PQLQMSVMAQMAQ 84
>UNIPROTKB|Q6AV35 [details] [associations]
symbol:OSJNBa0063J18.7 "Putative transcription factor"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 GO:GO:0003677 EMBL:DP000009
EMBL:AP008209 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:CM000140
EMBL:AC107206 RefSeq:NP_001050667.1 UniGene:Os.79759
EnsemblPlants:LOC_Os03g42100.1 GeneID:4333457 KEGG:osa:4333457
eggNOG:NOG300710 OMA:CTSENDS ProtClustDB:CLSN2694086 Uniprot:Q6AV35
Length = 310
Score = 133 (51.9 bits), Expect = 6.4e-06, P = 6.4e-06
Identities = 32/66 (48%), Positives = 46/66 (69%)
Query: 350 RARRGQ--ATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQR 407
+A+ G ATD SL R RRE+I+ER+K+LQ+LVP KV + ML+E ++YV+ LQ
Sbjct: 220 KAQSGHRSATDPQSLYARKRRERINERLKILQNLVPNGTKVD-ISTMLEEAMHYVKFLQL 278
Query: 408 QVEFLS 413
Q++ LS
Sbjct: 279 QIKLLS 284
>UNIPROTKB|Q2R0R9 [details] [associations]
symbol:LOC_Os11g41640 "Helix-loop-helix DNA-binding domain
containing protein" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 GO:GO:0003677
EMBL:DP000010 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000240244 KEGG:dosa:Os11t0634700-00 Gramene:Q2R0R9
OMA:SLYAKRR Uniprot:Q2R0R9
Length = 246
Score = 129 (50.5 bits), Expect = 9.6e-06, P = 9.6e-06
Identities = 40/134 (29%), Positives = 66/134 (49%)
Query: 280 KETAASPSVNNTTKVAEANASESSKNKRCKPNEGKANGNGAVKAEDEGXXXXXXXXXXXX 339
K+T S SV++++ + + S N C + G + G ++ A D G
Sbjct: 101 KKTRTSRSVSSSSTITDYETSSELVNPSC--SSGSSVGEDSIAATD-GSVVLKQSDNS-- 155
Query: 340 XXXXXXYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEII 399
R + + D+ SL + RRE+I+ER+++LQ LVP KV + ML+E +
Sbjct: 156 ----------RGHKQCSKDTQSLYAKRRRERINERLRILQQLVPNGTKVD-ISTMLEEAV 204
Query: 400 NYVQSLQRQVEFLS 413
YV+ LQ Q++ LS
Sbjct: 205 QYVKFLQLQIKLLS 218
>UNIPROTKB|Q8W5G3 [details] [associations]
symbol:OSJNBa0002J24.23 "Helix-loop-helix DNA-binding
domain containing protein, expressed" species:39947 "Oryza sativa
Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 GO:GO:0003677 EMBL:DP000009 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:CM000140 HOGENOM:HOG000240244 EMBL:AC090713
EnsemblPlants:LOC_Os03g55550.1 eggNOG:NOG237829 OMA:WIWERRR
Uniprot:Q8W5G3
Length = 310
Score = 120 (47.3 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 29/62 (46%), Positives = 42/62 (67%)
Query: 349 VRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQ 408
V ARR AT + SL R RRE+I+ R+++LQ LVP KV + ML+E ++YV+ LQ Q
Sbjct: 210 VPARRRSATIAQSLYARRRRERINGRLRILQKLVPNGTKVD-ISTMLEEAVHYVKFLQLQ 268
Query: 409 VE 410
++
Sbjct: 269 IK 270
Score = 50 (22.7 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 20/60 (33%), Positives = 31/60 (51%)
Query: 265 DFNSRKRKA-VSKGKGKETAASPSVNNTTKVAEANASESSKNKRCKPNEGKANGNGAVKA 323
D +K+KA VS + +E+ S S ++ E+N S+ N+R K + GNG V A
Sbjct: 160 DLGRQKKKARVSDKRNQESMQSGSCSDN----ESNCSQV--NRR-KVDRVAGGGNGKVPA 212
>UNIPROTKB|Q69TX2 [details] [associations]
symbol:P0021C04.13 "BHLH protein-like" species:39947 "Oryza
sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AP004687
ProteinModelPortal:Q69TX2 EnsemblPlants:LOC_Os06g10820.1
Gramene:Q69TX2 HOGENOM:HOG000241748 Uniprot:Q69TX2
Length = 211
Score = 123 (48.4 bits), Expect = 2.6e-05, P = 2.6e-05
Identities = 41/138 (29%), Positives = 67/138 (48%)
Query: 286 PSVNNTTKVAEANASESSKNKRCKPNEGKANGNGAVKAEDEGXXXXXXXXXXXXXXXXXX 345
P + NTT V+ + A +++ + P A AV++ G
Sbjct: 53 PGLLNTTMVSTSRA-QAAPSAPLHPVAATA----AVQSSSRGIMYTTTRQGVIDAAEEEE 107
Query: 346 YIHVRARRGQA---TDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYV 402
R RR A ++ S+A R+RRE++S+RM+ LQ LVPG ++ A ML+E I YV
Sbjct: 108 AAAPRPRRRNARVSSEPQSVAARLRRERVSQRMRALQRLVPGGARLD-TASMLEEAIRYV 166
Query: 403 QSLQRQVEFLSMKLASVN 420
+ L+ V+ L A+++
Sbjct: 167 KFLKGHVQSLERAAAALH 184
>TAIR|locus:504954829 [details] [associations]
symbol:GL3 "AT5G41315" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS;NAS] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0010091 "trichome branching" evidence=IMP]
[GO:0001708 "cell fate specification" evidence=IMP] [GO:0005515
"protein binding" evidence=IPI] [GO:0009957 "epidermal cell fate
specification" evidence=IMP] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:4.10.280.10 SUPFAM:SSF47459 InterPro:IPR025610 Pfam:PF14215
GO:GO:0010091 HSSP:P61244 EMBL:AB006707 eggNOG:NOG320411
HOGENOM:HOG000237985 ProtClustDB:CLSN2682588 GO:GO:0009957
EMBL:AF246291 IPI:IPI00543830 RefSeq:NP_680372.1 UniGene:At.27204
ProteinModelPortal:Q9FN69 SMR:Q9FN69 IntAct:Q9FN69 STRING:Q9FN69
EnsemblPlants:AT5G41315.1 GeneID:834133 KEGG:ath:AT5G41315
TAIR:At5g41315 InParanoid:Q9FN69 OMA:ERTSANC PhylomeDB:Q9FN69
Genevestigator:Q9FN69 Uniprot:Q9FN69
Length = 637
Score = 132 (51.5 bits), Expect = 2.9e-05, P = 2.9e-05
Identities = 34/124 (27%), Positives = 58/124 (46%)
Query: 298 NASESSKNKRCKPNEGKANGNGAVKAEDEGXXXXXXXXXXXXXXXXXXYIHVRARRGQAT 357
N + S R K + ++G V A +G + R + T
Sbjct: 381 NCDKQSSFTRWKKSSSSSSGTATVTAPSQGMLKKIIFDVPRVHQKEKLMLDSPEARDE-T 439
Query: 358 DSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMKLA 417
+H++ E+ RREK++ER L+ ++P NK+ K +LD+ I Y+Q L+R+V+ L
Sbjct: 440 GNHAVLEKKRREKLNERFMTLRKIIPSINKID-KVSILDDTIEYLQELERRVQELESCRE 498
Query: 418 SVNT 421
S +T
Sbjct: 499 STDT 502
>TAIR|locus:2089418 [details] [associations]
symbol:AT3G21330 "AT3G21330" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AP001305 EMBL:AF488617 EMBL:BT004279 EMBL:BT020364
IPI:IPI00541948 RefSeq:NP_188770.1 UniGene:At.38078
ProteinModelPortal:Q8S3D2 SMR:Q8S3D2 EnsemblPlants:AT3G21330.1
GeneID:821687 KEGG:ath:AT3G21330 TAIR:At3g21330 eggNOG:NOG330001
HOGENOM:HOG000095219 InParanoid:Q9LIG3 OMA:LMARELC PhylomeDB:Q8S3D2
ProtClustDB:CLSN2685101 Genevestigator:Q8S3D2 Uniprot:Q8S3D2
Length = 373
Score = 127 (49.8 bits), Expect = 4.4e-05, P = 4.4e-05
Identities = 37/95 (38%), Positives = 58/95 (61%)
Query: 356 ATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFL-SM 414
+TD ++A R RRE+ISE++++LQ LVPG K+ A MLDE NY++ L+ QV+ L ++
Sbjct: 276 STDPQTVAARQRRERISEKIRVLQTLVPGGTKMD-TASMLDEAANYLKFLRAQVKALENL 334
Query: 415 KLASVNTRLELNVDALMSKDIYQPN-KPL--PHSI 446
+ T L + A S ++ P+ PL P+ I
Sbjct: 335 RPKLDQTNLSFS-SAPTSFPLFHPSFLPLQNPNQI 368
>UNIPROTKB|Q8S0N2 [details] [associations]
symbol:P0692C11.41-1 "BHLH transcription factor-like"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AP008207
EMBL:CM000138 EMBL:AP003381 EMBL:AP003273 EMBL:AK106119
RefSeq:NP_001044022.1 UniGene:Os.25546 GeneID:4327679
KEGG:osa:4327679 eggNOG:NOG254276 OMA:EPDMEAM
ProtClustDB:CLSN2919059 Uniprot:Q8S0N2
Length = 393
Score = 127 (49.8 bits), Expect = 4.9e-05, P = 4.9e-05
Identities = 29/70 (41%), Positives = 48/70 (68%)
Query: 356 ATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMK 415
++D ++A R+RRE++S+R+++LQ LVPG NK+ A MLDE +Y++ L+ QV+ L
Sbjct: 282 SSDPQTVAARLRRERVSDRLRVLQKLVPGGNKMD-TASMLDEAASYLKFLKSQVQKLET- 339
Query: 416 LASVNTRLEL 425
L + T +L
Sbjct: 340 LGTTTTTSKL 349
>TAIR|locus:2028957 [details] [associations]
symbol:RHD6 "AT1G66470" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0048766 "root
hair initiation" evidence=IMP] [GO:0005739 "mitochondrion"
evidence=IDA] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005739
GO:GO:0005634 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0048766 EMBL:AC074025
EMBL:AY128310 EMBL:BT006320 EMBL:AF488615 IPI:IPI00529158
PIR:C96690 RefSeq:NP_176820.1 UniGene:At.35765
ProteinModelPortal:Q9C707 SMR:Q9C707 IntAct:Q9C707
EnsemblPlants:AT1G66470.1 GeneID:842965 KEGG:ath:AT1G66470
TAIR:At1g66470 eggNOG:NOG301765 HOGENOM:HOG000006063
InParanoid:Q9C707 OMA:HESFPPP PhylomeDB:Q9C707
ProtClustDB:CLSN2681768 Genevestigator:Q9C707 Uniprot:Q9C707
Length = 298
Score = 124 (48.7 bits), Expect = 6.0e-05, P = 6.0e-05
Identities = 29/56 (51%), Positives = 40/56 (71%)
Query: 358 DSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLS 413
D SLA + RRE+ISER+K+LQ+LVP KV ML++ I+YV+ LQ QV+ L+
Sbjct: 204 DPQSLAAKNRRERISERLKILQELVPNGTKVD-LVTMLEKAISYVKFLQVQVKVLA 258
>TAIR|locus:2026629 [details] [associations]
symbol:EGL3 "AT1G63650" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0009957 "epidermal
cell fate specification" evidence=RCA;IMP] [GO:0001708 "cell fate
specification" evidence=RCA] [GO:0009909 "regulation of flower
development" evidence=RCA] [GO:0009913 "epidermal cell
differentiation" evidence=RCA] [GO:0009965 "leaf morphogenesis"
evidence=RCA] [GO:0016570 "histone modification" evidence=RCA]
[GO:0048449 "floral organ formation" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
InterPro:IPR025610 Pfam:PF14215 EMBL:AF251687 EMBL:AF013465
EMBL:AF027732 EMBL:AC011622 IPI:IPI00545374 PIR:D96661
RefSeq:NP_001185302.1 RefSeq:NP_176552.1 RefSeq:NP_974080.1
UniGene:At.25024 ProteinModelPortal:Q9CAD0 SMR:Q9CAD0 IntAct:Q9CAD0
STRING:Q9CAD0 PRIDE:Q9CAD0 EnsemblPlants:AT1G63650.1
EnsemblPlants:AT1G63650.2 EnsemblPlants:AT1G63650.3 GeneID:842669
KEGG:ath:AT1G63650 GeneFarm:1894 TAIR:At1g63650 eggNOG:NOG320411
HOGENOM:HOG000237985 InParanoid:Q9CAD0 OMA:ERASANC PhylomeDB:Q9CAD0
ProtClustDB:CLSN2682588 Genevestigator:Q9CAD0 GermOnline:AT1G63650
GO:GO:0009957 Uniprot:Q9CAD0
Length = 596
Score = 127 (49.8 bits), Expect = 9.4e-05, P = 9.4e-05
Identities = 25/73 (34%), Positives = 46/73 (63%)
Query: 355 QATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSM 414
+ T +H+L+E+ RREK++ER L+ ++P +K+ K +LD+ I Y+Q LQ++V+ L
Sbjct: 401 EETGNHALSEKKRREKLNERFMTLRSIIPSISKID-KVSILDDTIEYLQDLQKRVQELES 459
Query: 415 KLASVNTRLELNV 427
S +T + +
Sbjct: 460 CRESADTETRITM 472
>UNIPROTKB|Q6ZFY4 [details] [associations]
symbol:OJ1311_H06.19 "BHLH protein-like" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AP003983
EMBL:AP004161 Uniprot:Q6ZFY4
Length = 298
Score = 122 (48.0 bits), Expect = 0.00010, P = 0.00010
Identities = 28/56 (50%), Positives = 40/56 (71%)
Query: 358 DSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLS 413
D SLA + RRE+ISER+++LQ+LVP KV ML++ I+YV+ LQ QV+ L+
Sbjct: 206 DPQSLAAKNRRERISERLRILQELVPNGTKVD-LVTMLEKAISYVKFLQLQVKVLA 260
>TAIR|locus:2156015 [details] [associations]
symbol:RSL1 "AT5G37800" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000006063 ProtClustDB:CLSN2681768 EMBL:AB016873
IPI:IPI00523734 RefSeq:NP_198596.1 UniGene:At.55195
ProteinModelPortal:Q9FJ00 SMR:Q9FJ00 EnsemblPlants:AT5G37800.1
GeneID:833758 KEGG:ath:AT5G37800 TAIR:At5g37800 eggNOG:NOG303056
InParanoid:Q9FJ00 OMA:MDFNASS PhylomeDB:Q9FJ00
Genevestigator:Q9FJ00 Uniprot:Q9FJ00
Length = 307
Score = 122 (48.0 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 29/56 (51%), Positives = 39/56 (69%)
Query: 358 DSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLS 413
D SLA + RRE+ISER+K+LQ+LVP KV ML++ I YV+ LQ QV+ L+
Sbjct: 210 DPQSLAAKNRRERISERLKVLQELVPNGTKVD-LVTMLEKAIGYVKFLQVQVKVLA 264
Score = 38 (18.4 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 10/41 (24%), Positives = 19/41 (46%)
Query: 267 NSRKRKAVSKGKGKETAASPSVNNTTKVAEANASESSKNKR 307
NS + A + G G + ++ N E+ + + + NKR
Sbjct: 139 NSMSKPATNHGNGDWLYSGSTIVNIGSRHESTSPKLAGNKR 179
>UNIPROTKB|Q5TKP7 [details] [associations]
symbol:OJ1362_G11.11 "Putative uncharacterized protein
OJ1362_G11.11" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AC104713 ProteinModelPortal:Q5TKP7
EnsemblPlants:LOC_Os05g46370.1 KEGG:dosa:Os05t0541400-00
Gramene:Q5TKP7 HOGENOM:HOG000238211 Uniprot:Q5TKP7
Length = 416
Score = 124 (48.7 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 26/57 (45%), Positives = 43/57 (75%)
Query: 356 ATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFL 412
++D ++A R+RRE++SER+++LQ LVPG +K+ A MLDE +Y++ L+ Q+E L
Sbjct: 304 SSDPQTVAARLRRERVSERLRVLQRLVPGGSKMD-TATMLDEAASYLKFLKSQLEAL 359
Score = 40 (19.1 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 10/33 (30%), Positives = 15/33 (45%)
Query: 210 PNPMTANEKLPRVSSSPSLKVLGSQAQATGNKS 242
P+ EK P V +SP+ K + A +S
Sbjct: 186 PSKRKLPEKYPVVGTSPTTKTTTTSETAAERRS 218
>UNIPROTKB|Q2QML8 [details] [associations]
symbol:LOC_Os12g40730 "Helix-loop-helix DNA-binding domain
containing protein" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598
InterPro:IPR024097 InterPro:IPR024102 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 GO:GO:0006355 GO:GO:0003677
Gene3D:4.10.280.10 SUPFAM:SSF47459 PANTHER:PTHR10014
PANTHER:PTHR10014:SF30 EMBL:DP000011 KEGG:dosa:Os12t0599400-00
KEGG:dosa:Os12t0599550-00 Gramene:Q2QML8 HOGENOM:HOG000244163
Uniprot:Q2QML8
Length = 387
Score = 114 (45.2 bits), Expect = 0.00028, Sum P(2) = 0.00028
Identities = 24/48 (50%), Positives = 36/48 (75%)
Query: 367 RREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSM 414
RR KI+ER + LQ LVPGC+K + +A LD+ I Y++SLQ Q++ +S+
Sbjct: 226 RRFKITERFRTLQRLVPGCDK-SNQASTLDQTIQYMKSLQHQLKAMSV 272
Score = 48 (22.0 bits), Expect = 0.00028, Sum P(2) = 0.00028
Identities = 10/23 (43%), Positives = 12/23 (52%)
Query: 264 NDFNSRKRKAVSKGKGKETAASP 286
+D RK+K S GK ASP
Sbjct: 178 DDSGERKKKKASSAAGKSKQASP 200
>TAIR|locus:2204898 [details] [associations]
symbol:HFR1 "AT1G02340" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA;TAS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0007165 "signal transduction" evidence=TAS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0009585 "red, far-red light
phototransduction" evidence=TAS] [GO:0009642 "response to light
intensity" evidence=IEP] [GO:0009785 "blue light signaling pathway"
evidence=TAS] [GO:0003712 "transcription cofactor activity"
evidence=IMP] [GO:0005829 "cytosol" evidence=IDA] [GO:0009738
"abscisic acid mediated signaling pathway" evidence=IMP]
[GO:0007623 "circadian rhythm" evidence=RCA] [GO:0009630
"gravitropism" evidence=RCA] [GO:0010017 "red or far-red light
signaling pathway" evidence=RCA] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005829 GO:GO:0005634 GO:GO:0009738
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 GO:GO:0003712
GO:GO:0009585 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AC064879
GO:GO:0009642 GO:GO:0009785 EMBL:AF288287 EMBL:AF324245
EMBL:AF323182 EMBL:AK117248 IPI:IPI00545685 PIR:G86153
RefSeq:NP_563650.1 UniGene:At.24795 ProteinModelPortal:Q9FE22
SMR:Q9FE22 IntAct:Q9FE22 STRING:Q9FE22 PRIDE:Q9FE22
EnsemblPlants:AT1G02340.1 GeneID:839300 KEGG:ath:AT1G02340
TAIR:At1g02340 eggNOG:NOG274868 HOGENOM:HOG000112891 OMA:FSSHAMR
PhylomeDB:Q9FE22 ProtClustDB:CLSN2916946 Genevestigator:Q9FE22
GermOnline:AT1G02340 Uniprot:Q9FE22
Length = 292
Score = 110 (43.8 bits), Expect = 0.00037, Sum P(2) = 0.00037
Identities = 23/49 (46%), Positives = 35/49 (71%)
Query: 365 RVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLS 413
R R EK+S +M+ LQ LVP C+K T K +LD+ I Y+++LQ Q++ +S
Sbjct: 144 RRRDEKMSNKMRKLQQLVPNCHK-TDKVSVLDKTIEYMKNLQLQLQMMS 191
Score = 47 (21.6 bits), Expect = 0.00037, Sum P(2) = 0.00037
Identities = 11/27 (40%), Positives = 16/27 (59%)
Query: 523 MGFGQNPNSETSLQSQSFHGSNQAPHM 549
+GFG + + T++ S HG N A HM
Sbjct: 204 LGFGMHNHMLTAMASA--HGLNPANHM 228
>RGD|3092 [details] [associations]
symbol:Mitf "microphthalmia-associated transcription factor"
species:10116 "Rattus norvegicus" [GO:0001077 "RNA polymerase II core
promoter proximal region sequence-specific DNA binding transcription
factor activity involved in positive regulation of transcription"
evidence=IEA;ISO] [GO:0003674 "molecular_function" evidence=ND]
[GO:0003677 "DNA binding" evidence=IEA;ISO] [GO:0003682 "chromatin
binding" evidence=IEA;ISO] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISO] [GO:0003705 "RNA
polymerase II distal enhancer sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISO] [GO:0005575
"cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA;ISO] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;ISO] [GO:0006461 "protein complex
assembly" evidence=IEA;ISO] [GO:0008150 "biological_process"
evidence=ND] [GO:0010468 "regulation of gene expression"
evidence=ISO] [GO:0016055 "Wnt receptor signaling pathway"
evidence=IEA;ISO] [GO:0030154 "cell differentiation" evidence=ISO]
[GO:0030316 "osteoclast differentiation" evidence=IEA;ISO]
[GO:0030318 "melanocyte differentiation" evidence=IEA;ISO]
[GO:0042127 "regulation of cell proliferation" evidence=IEA;ISO]
[GO:0042981 "regulation of apoptotic process" evidence=ISO]
[GO:0043010 "camera-type eye development" evidence=IEA;ISO]
[GO:0043066 "negative regulation of apoptotic process"
evidence=IEA;ISO] [GO:0043234 "protein complex" evidence=IEA;ISO]
[GO:0043473 "pigmentation" evidence=ISO] [GO:0045165 "cell fate
commitment" evidence=IEA;ISO] [GO:0045670 "regulation of osteoclast
differentiation" evidence=IEA;ISO] [GO:0045893 "positive regulation
of transcription, DNA-dependent" evidence=ISO] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=ISO] [GO:0046849 "bone remodeling" evidence=IEA;ISO]
[GO:0046983 "protein dimerization activity" evidence=IEA]
InterPro:IPR011598 InterPro:IPR024097 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 RGD:3092 GO:GO:0005634 GO:GO:0043066 GO:GO:0043234
GO:GO:0006461 GO:GO:0016055 GO:GO:0003677 GO:GO:0046849 GO:GO:0003682
GO:GO:0003705 GO:GO:0042127 GO:GO:0001077 GO:GO:0043010 GO:GO:0045670
Gene3D:4.10.280.10 SUPFAM:SSF47459 PANTHER:PTHR10014 GO:GO:0030318
GO:GO:0045165 GO:GO:0030316 eggNOG:NOG251286 HOGENOM:HOG000231368
OrthoDB:EOG495ZRR EMBL:AF029886 IPI:IPI00563001 UniGene:Rn.31427
ProteinModelPortal:O88368 STRING:O88368 UCSC:RGD:3092
InParanoid:O88368 ArrayExpress:O88368 Genevestigator:O88368
GermOnline:ENSRNOG00000008658 Uniprot:O88368
Length = 110
Score = 97 (39.2 bits), Expect = 0.00038, P = 0.00038
Identities = 30/89 (33%), Positives = 44/89 (49%)
Query: 351 ARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVT---GKALMLDEIINYVQSLQR 407
A+ Q D+H+L ER RR I++R+K L L+P N K +L ++Y++ LQR
Sbjct: 16 AKERQKKDNHNLIERRRRFNINDRIKELGTLIPKSNDPDMRWNKGTILKASVDYIRKLQR 75
Query: 408 Q------VEFLSMKLASVNTRLELNVDAL 430
+ +E KL N L L V L
Sbjct: 76 EQQRAKDLENRQKKLEHANRHLLLRVQEL 104
>UNIPROTKB|O88368 [details] [associations]
symbol:Mitf "Microphthalmia-associated transcription
factor" species:10116 "Rattus norvegicus" [GO:0046983 "protein
dimerization activity" evidence=IEA] InterPro:IPR011598
InterPro:IPR024097 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
RGD:3092 GO:GO:0005634 GO:GO:0043066 GO:GO:0043234 GO:GO:0006461
GO:GO:0016055 GO:GO:0003677 GO:GO:0046849 GO:GO:0003682
GO:GO:0003705 GO:GO:0042127 GO:GO:0001077 GO:GO:0043010
GO:GO:0045670 Gene3D:4.10.280.10 SUPFAM:SSF47459 PANTHER:PTHR10014
GO:GO:0030318 GO:GO:0045165 GO:GO:0030316 eggNOG:NOG251286
HOGENOM:HOG000231368 OrthoDB:EOG495ZRR EMBL:AF029886
IPI:IPI00563001 UniGene:Rn.31427 ProteinModelPortal:O88368
STRING:O88368 UCSC:RGD:3092 InParanoid:O88368 ArrayExpress:O88368
Genevestigator:O88368 GermOnline:ENSRNOG00000008658 Uniprot:O88368
Length = 110
Score = 97 (39.2 bits), Expect = 0.00038, P = 0.00038
Identities = 30/89 (33%), Positives = 44/89 (49%)
Query: 351 ARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVT---GKALMLDEIINYVQSLQR 407
A+ Q D+H+L ER RR I++R+K L L+P N K +L ++Y++ LQR
Sbjct: 16 AKERQKKDNHNLIERRRRFNINDRIKELGTLIPKSNDPDMRWNKGTILKASVDYIRKLQR 75
Query: 408 Q------VEFLSMKLASVNTRLELNVDAL 430
+ +E KL N L L V L
Sbjct: 76 EQQRAKDLENRQKKLEHANRHLLLRVQEL 104
>UNIPROTKB|Q657D1 [details] [associations]
symbol:P0697C12.40 "BHLH transcription-like" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AP003141
EMBL:AP003296 Uniprot:Q657D1
Length = 484
Score = 120 (47.3 bits), Expect = 0.00041, P = 0.00041
Identities = 27/57 (47%), Positives = 40/57 (70%)
Query: 356 ATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFL 412
++D ++A R RRE+ISER+++LQ LVPG K+ A MLDE NY++ L+ Q+ L
Sbjct: 371 SSDPQTVAARQRRERISERLRVLQKLVPGGAKMD-TASMLDEAANYLRFLKSQIREL 426
>TAIR|locus:2126856 [details] [associations]
symbol:IND "AT4G00120" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0010197 "polar nucleus fusion" evidence=IMP] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AL161471
GO:GO:0010197 EMBL:AF069299 EMBL:BT029443 EMBL:AF488578
IPI:IPI00532644 PIR:T01340 RefSeq:NP_191923.1 UniGene:At.34598
ProteinModelPortal:O81313 SMR:O81313 IntAct:O81313 STRING:O81313
PRIDE:O81313 EnsemblPlants:AT4G00120.1 GeneID:827911
KEGG:ath:AT4G00120 TAIR:At4g00120 eggNOG:NOG274244
HOGENOM:HOG000113070 InParanoid:O81313 OMA:DWNKAND PhylomeDB:O81313
ProtClustDB:CLSN2916160 Genevestigator:O81313 Uniprot:O81313
Length = 198
Score = 111 (44.1 bits), Expect = 0.00056, P = 0.00056
Identities = 25/55 (45%), Positives = 37/55 (67%)
Query: 358 DSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFL 412
D ++ R RRE+ISE++++L+ +VPG K+ A MLDE I Y + L+RQV L
Sbjct: 121 DPQTVVARRRRERISEKIRILKRIVPGGAKMD-TASMLDEAIRYTKFLKRQVRIL 174
>TAIR|locus:2179122 [details] [associations]
symbol:APTX "APRATAXIN-like" species:3702 "Arabidopsis
thaliana" [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] [GO:0006790 "sulfur compound metabolic
process" evidence=IDA] [GO:0009150 "purine ribonucleotide metabolic
process" evidence=IDA] [GO:0047627 "adenylylsulfatase activity"
evidence=IDA] [GO:0000278 "mitotic cell cycle" evidence=RCA]
[GO:0006259 "DNA metabolic process" evidence=RCA] [GO:0006310 "DNA
recombination" evidence=RCA] [GO:0006396 "RNA processing"
evidence=RCA] [GO:0007062 "sister chromatid cohesion" evidence=RCA]
[GO:0007126 "meiosis" evidence=RCA] [GO:0007131 "reciprocal meiotic
recombination" evidence=RCA] [GO:0010332 "response to gamma
radiation" evidence=RCA] [GO:0010413 "glucuronoxylan metabolic
process" evidence=RCA] [GO:0032204 "regulation of telomere
maintenance" evidence=RCA] [GO:0033044 "regulation of chromosome
organization" evidence=RCA] [GO:0042138 "meiotic DNA double-strand
break formation" evidence=RCA] [GO:0043247 "telomere maintenance in
response to DNA damage" evidence=RCA] [GO:0045132 "meiotic
chromosome segregation" evidence=RCA] [GO:0045492 "xylan
biosynthetic process" evidence=RCA] InterPro:IPR011146
InterPro:IPR011598 InterPro:IPR015880 Pfam:PF00010 PROSITE:PS00028
PROSITE:PS50157 PROSITE:PS50888 PROSITE:PS51084 SMART:SM00353
SMART:SM00355 GO:GO:0005524 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0046872 GO:GO:0003677 GO:GO:0006260
GO:GO:0008270 GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10
SUPFAM:SSF47459 Gene3D:3.30.428.10 InterPro:IPR001310
SUPFAM:SSF54197 PROSITE:PS00892 InterPro:IPR019808 eggNOG:NOG278510
KO:K10863 PANTHER:PTHR12486 GO:GO:0006790 EMBL:AL161746
IPI:IPI00539681 PIR:T48153 RefSeq:NP_195751.1 UniGene:At.54671
ProteinModelPortal:Q9M041 SMR:Q9M041 PRIDE:Q9M041
EnsemblPlants:AT5G01310.1 GeneID:830940 KEGG:ath:AT5G01310
GeneFarm:3073 TAIR:At5g01310 HOGENOM:HOG000083464 InParanoid:Q9M041
OMA:GHEGNLQ PhylomeDB:Q9M041 ProtClustDB:CLSN2687115
BioCyc:ARA:AT5G01310-MONOMER Genevestigator:Q9M041 GO:GO:0047627
GO:GO:0009150 InterPro:IPR002589 Pfam:PF01661 PROSITE:PS51154
Uniprot:Q9M041
Length = 912
Score = 121 (47.7 bits), Expect = 0.00074, P = 0.00074
Identities = 28/65 (43%), Positives = 42/65 (64%)
Query: 356 ATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMK 415
+TD S+A R RR +IS+R K+LQ +VPG K+ + MLDE I+YV+ L+ Q+ +
Sbjct: 44 STDPQSVAARDRRHRISDRFKILQSMVPGGAKMDTVS-MLDEAISYVKFLKAQIWYHQNM 102
Query: 416 LASVN 420
L +N
Sbjct: 103 LLFIN 107
>UNIPROTKB|Q651K2 [details] [associations]
symbol:B1089G05.30 "BHLH protein-like" species:39947 "Oryza
sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CM000143 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AP005967 EnsemblPlants:LOC_Os06g30090.1 Uniprot:Q651K2
Length = 294
Score = 114 (45.2 bits), Expect = 0.00078, P = 0.00078
Identities = 26/63 (41%), Positives = 39/63 (61%)
Query: 350 RARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQV 409
+ +R ++ S A + RRE+ISER++ LQ+LVP KV MLD I+YV+ +Q Q+
Sbjct: 190 KKQRANNKETQSSAAKSRRERISERLRALQELVPSGGKVD-MVTMLDRAISYVKFMQMQL 248
Query: 410 EFL 412
L
Sbjct: 249 RVL 251
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.311 0.126 0.362 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 553 461 0.00096 118 3 11 23 0.48 34
35 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 97
No. of states in DFA: 606 (64 KB)
Total size of DFA: 259 KB (2138 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 43.36u 0.09s 43.45t Elapsed: 00:00:04
Total cpu time: 43.37u 0.09s 43.46t Elapsed: 00:00:04
Start: Fri May 10 04:33:25 2013 End: Fri May 10 04:33:29 2013