BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 044652
(553 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255587658|ref|XP_002534345.1| transcription factor, putative [Ricinus communis]
gi|223525454|gb|EEF28039.1| transcription factor, putative [Ricinus communis]
Length = 554
Score = 615 bits (1587), Expect = e-173, Method: Compositional matrix adjust.
Identities = 368/583 (63%), Positives = 409/583 (70%), Gaps = 66/583 (11%)
Query: 4 EFFLNAGIPAPVAMPIW-------------PSAAMEIQIQATNEMM--NCSSEQSSDCFF 48
EFFLN GIP P +P+ S+AM Q NE N SS SDCF+
Sbjct: 5 EFFLNTGIPPP-QLPLHFEQNSTWQQQQQSFSSAMATQ---ANEFKHNNSSSNHLSDCFY 60
Query: 49 NPNNWEKSTDHSLQFDSALSSIVSSPAASNSNISNESSVIRELIGKLGNIGNNSGAGEIT 108
+PN WEKSTD SLQFDSALSS+VSSPAASNSNIS ES +IRELIGKLGN+G+ GEI+
Sbjct: 61 DPN-WEKSTDQSLQFDSALSSMVSSPAASNSNISTESFIIRELIGKLGNVGS---TGEIS 116
Query: 109 PHS----LAPYINNNSNNNNGSSSTNASCYTTPLNSPPKLNLPMS--LGNSMPLNSSVAE 162
PHS A Y N NS G++STN SCYTTPL+SPPKLN+ + L + LNSSVAE
Sbjct: 117 PHSQPMLAASYNNKNSITGTGNNSTNTSCYTTPLSSPPKLNMSPTDQLSTPLALNSSVAE 176
Query: 163 FSADPGFAERAARFSRFGSRSFNGRSTGQFVPNHNPDQFGLSRSNNNPNPMTANEKLPRV 222
F+ADPGFAERAARFS FGSRSFNGR++ QFGL++ M KLPRV
Sbjct: 177 FTADPGFAERAARFSCFGSRSFNGRTS----------QFGLNKLEMQL--MGNANKLPRV 224
Query: 223 SSSPSLKVLGSQAQATGNK--SP--QDRSELANS--QEESSVSEQVP--NDFNSRKRKAV 274
SS+PSLK +GS Q GNK SP QDRSELANS QEESSVSEQ P + NS+KRK
Sbjct: 225 SSTPSLKAVGSHHQK-GNKNSSPLLQDRSELANSTSQEESSVSEQNPPNAELNSKKRKTA 283
Query: 275 SKGKGKETAASPSVNNTTKVAEANASESSKNKRCKPNEGKANGNGAVKAEDE----GDDK 330
K K KE A P N+ K AE + ++S KR K NE VKAE+E GDDK
Sbjct: 284 PKAKSKE-APQP---NSAKDAEVD--DNSNAKRSKGNE-----KNDVKAEEEHKGNGDDK 332
Query: 331 QAKANNAKPPEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTG 390
Q KA+ KPPEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTG
Sbjct: 333 QNKAS-TKPPEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTG 391
Query: 391 KALMLDEIINYVQSLQRQVEFLSMKLASVNTRLELNVDALMSKDIYQPNKPLPHSIFQID 450
KALMLDEIINYVQSLQRQVEFLSMKLASVNTRL++N+D LMSKDI+Q LPH IF ID
Sbjct: 392 KALMLDEIINYVQSLQRQVEFLSMKLASVNTRLDINLDTLMSKDIFQTTNQLPHPIFPID 451
Query: 451 SSASAFFSHQPQQNPALHGNISNGTMTQCPVDPLDNALCRNLSMQLPQLEQFTETIPQFQ 510
SSASA F HQPQQNPALH NISNG +T C VDPLD L NL+M LP LE F T PQF
Sbjct: 452 SSASAIFGHQPQQNPALHSNISNGALTHCSVDPLDTGLSHNLNMHLPPLEGFNHTPPQFP 511
Query: 511 NFGEDDLQSIVQMGFGQNPNSETSLQSQSFHGSNQAPHMKAEL 553
F E+DLQSIVQMGF Q P E L Q+ H SNQ +MK E+
Sbjct: 512 TFCEEDLQSIVQMGFTQIPVPEALLPGQNIHSSNQVSYMKTEI 554
>gi|224069890|ref|XP_002303073.1| predicted protein [Populus trichocarpa]
gi|222844799|gb|EEE82346.1| predicted protein [Populus trichocarpa]
Length = 563
Score = 612 bits (1577), Expect = e-172, Method: Compositional matrix adjust.
Identities = 358/598 (59%), Positives = 423/598 (70%), Gaps = 80/598 (13%)
Query: 1 MENEFFLNAGIPAPV----------AMPIWPSAAMEIQIQATNEMMNCSSEQSSDCFFNP 50
ME+E+F NAG+P +MP+W S + +++Q NCS+ + FN
Sbjct: 1 MESEYFFNAGVPPQALLFEPTSTSSSMPVWQSLSSPMEMQD-----NCSARR----LFN- 50
Query: 51 NNWEKSTDHSLQFDSALSSIVSSPAASNSNISNESSVIRELIGKLGNIGNNSGAGEITPH 110
+NWEKSTDHS F+S+LSS+VSSP SN N+S+ES ++RELIG LGNI N++ GEI+PH
Sbjct: 51 SNWEKSTDHSPHFESSLSSMVSSPGVSNCNVSSESFMVRELIGNLGNIDNSNNPGEISPH 110
Query: 111 S----LAPYINNNSNNNNGSSSTNASCYTTPLNSPPKLNLPM------------SLGNSM 154
S A YI +N S N SCYTTPLNSPPKLN+P+ SLG M
Sbjct: 111 SQPMLAASYITAANN------SANTSCYTTPLNSPPKLNMPVMDQFSKEHLNIPSLGKPM 164
Query: 155 PLNSSVAEFSADPGFAERAARFSRFGSRSFNGRSTGQFVPNHNPDQFGLSRSN--NNPNP 212
LNSSVAEF+ADPGFAERAA+FS FGSRSFNGR + Q GL+ + N NP
Sbjct: 165 GLNSSVAEFTADPGFAERAAKFSCFGSRSFNGRIS----------QLGLNNAEMANGCNP 214
Query: 213 MTANEKLPRVSSSPSLKVLGSQAQATGNKSP--QDRSELANSQEESSVSEQVP------- 263
+ N KL RV+SSP LK +GSQ GNKS QDRSEL NSQE SSVSEQ+P
Sbjct: 215 LMGNGKLARVASSPLLKAVGSQ---KGNKSTPLQDRSELTNSQE-SSVSEQIPSGEAGLK 270
Query: 264 --NDFNSRKRKAVSKGKGKETAASPSVNNTTKVAEANASESSKNKRCKPNEGKANGNGAV 321
N+ NSRKRKA+SKGK K++A++P + T +A ++S KR KPNEG+ N N V
Sbjct: 271 ASNELNSRKRKALSKGKAKQSASNPPASATK---DAETDDNSNTKRIKPNEGEENENSPV 327
Query: 322 KAEDE----GDDKQAKANNAKPPEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKL 377
KAE+E GDD Q KAN ++PPEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKL
Sbjct: 328 KAEEEPKGSGDDIQNKAN-SRPPEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKL 386
Query: 378 LQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMKLASVNTRLELNVDALMSKDIYQ 437
LQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMKLASVNTRL+ N+D L+SKDI+Q
Sbjct: 387 LQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMKLASVNTRLDFNMDTLISKDIFQ 446
Query: 438 PNKPLPHSIFQIDSSA-SAFFSHQPQQNPALHGNISNGTMTQCPVDPLD-NALCRNLSMQ 495
++PLPH IF +DSSA +A FSHQ QQNP LH NISNG +T C VDPLD LC+ L+ Q
Sbjct: 447 SSQPLPHPIFPLDSSAPAAIFSHQQQQNPPLHSNISNGAVTHCSVDPLDTTGLCQTLNAQ 506
Query: 496 LPQLEQFTETIPQFQNFGEDDLQSIVQMGFGQNPNSETSLQSQSFHGSNQAPHMKAEL 553
LP L+ FT+ Q+ F EDDLQ+IVQMG+GQNPN ET L Q+FHGSNQ HMK EL
Sbjct: 507 LPPLDGFTQNAHQYPTFCEDDLQTIVQMGYGQNPNLETFL-PQNFHGSNQVSHMKIEL 563
>gi|356527316|ref|XP_003532257.1| PREDICTED: transcription factor bHLH62-like [Glycine max]
Length = 586
Score = 593 bits (1530), Expect = e-167, Method: Compositional matrix adjust.
Identities = 354/604 (58%), Positives = 414/604 (68%), Gaps = 76/604 (12%)
Query: 1 MENEFFLNAGIPAPVAMPI--------------WPSA---AMEIQIQATNEMMNCSSEQS 43
MEN+FFLNAG+P + W S+ AM++Q+ ++NCS+EQ+
Sbjct: 1 MENQFFLNAGVPPQLHFEPSPHHHHHHLCPPPSWQSSLSSAMDVQVT----VLNCSTEQN 56
Query: 44 SDCFFNPN-NWEKSTDH-SLQFDSALSSIVSSPAASNSNISNESSVIRELIGKLGNIGNN 101
DCF+N W+KSTDH LQFDSALSS+VSSPAASNSN+S+E+ VIRELIGKLGNIG
Sbjct: 57 PDCFYNNTPTWDKSTDHHGLQFDSALSSMVSSPAASNSNMSSENFVIRELIGKLGNIGAG 116
Query: 102 SGAGEITPHSLAPYINNNSNNNNGSSSTNASCYTTPLNSPPKLNL--------------- 146
S EI+PHS P + +S N ++STN SCY+TPL+S PK+N+
Sbjct: 117 SDEIEISPHS-QPLVGASSYINCNNNSTNTSCYSTPLSSSPKVNMNKIPTMVKHLVKEGM 175
Query: 147 PMSLGNSMPLNSSVAEFSADPGFAERAARFSRFGSRSFNGRSTGQFVPNHNPDQFGLSRS 206
P+SLG S LNS+VAEFSADPGFAERAA+ S FGSRSFNGR+T Q N ++
Sbjct: 176 PLSLGTSTSLNSTVAEFSADPGFAERAAKLSCFGSRSFNGRTT-QLCLN-------IAEL 227
Query: 207 NNNPNPMTANEK--LPRVSSSPSLKVLGSQAQATGNK-SP-QDRSELANSQEESSVSEQV 262
+P+ N K LPRVSSSPSLKVLGSQ NK SP QD E+ANSQEES++SEQ
Sbjct: 228 AQRSSPLVENGKKQLPRVSSSPSLKVLGSQMGTQENKNSPLQDLMEVANSQEESAISEQT 287
Query: 263 PND---------FNSRKRKAVSKGKGKETAASPSVNNTTKVAEANASESSKNKRCKPNEG 313
PN NSRKRK SKGK KET+ S T A AS+ S KR KPNEG
Sbjct: 288 PNGDTGEKPSPYVNSRKRKGPSKGKAKETSTS-----TNPPMAAEASDDSNAKRSKPNEG 342
Query: 314 KANGNGAVKAEDEG---------DDKQAKANNAKPPEPPKDYIHVRARRGQATDSHSLAE 364
+ N NG VKAE+E D+KQ K+N +KPPEPPKDYIHVRARRGQATDSHSLAE
Sbjct: 343 EGNENGQVKAEEESKGGNNSNANDEKQNKSN-SKPPEPPKDYIHVRARRGQATDSHSLAE 401
Query: 365 RVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMKLASVNTRLE 424
RVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMKLASVNTRL+
Sbjct: 402 RVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMKLASVNTRLD 461
Query: 425 LNVDALMSKDIYQPNKPLPHSIFQIDSSASAFFSHQPQQNPALHGNISNGTMTQCPVDPL 484
++++L+SKDI+Q N L IF IDSSA F+ Q Q NPA+H NI NGTMT VDPL
Sbjct: 462 FSIESLISKDIFQSNNSLAQPIFPIDSSAPPFYGQQTQPNPAIHNNIPNGTMTHNSVDPL 521
Query: 485 DNALCRNLSMQLPQLEQFTETIPQFQ-NFGEDDLQSIVQMGFGQNPNSETSLQSQSFHGS 543
D +C+NL M LP L F E Q+ F EDDL +IVQMGFGQ N +T +QSQSF+GS
Sbjct: 522 DTGMCQNLGMHLPHLNGFNEGGFQYPITFSEDDLHTIVQMGFGQTANRKTPIQSQSFNGS 581
Query: 544 NQAP 547
NQ P
Sbjct: 582 NQEP 585
>gi|356566230|ref|XP_003551337.1| PREDICTED: transcription factor bHLH62-like [Glycine max]
Length = 585
Score = 586 bits (1511), Expect = e-165, Method: Compositional matrix adjust.
Identities = 354/600 (59%), Positives = 414/600 (69%), Gaps = 69/600 (11%)
Query: 1 MENEFFLNAGIP------------APVAMPIWPSA---AMEIQIQATNEMMNCSSEQSSD 45
MEN+FFLNAG+P P P W S+ AM++Q+ ++NCS+EQ+ D
Sbjct: 1 MENQFFLNAGVPPQLHFEPSPHGHQPCPPPSWQSSLSSAMDVQVT----VLNCSTEQTQD 56
Query: 46 CFFNPN-NWEKSTDHSLQFDSALSSIVSSPAASNSNISNESSVIRELIGKLGNIGNNSGA 104
CF+N W+KSTDH LQFDSALSS+VSSPAASNSNIS+E+ VIRELIGKLGNIG G+
Sbjct: 57 CFYNTTPTWDKSTDHGLQFDSALSSMVSSPAASNSNISSENFVIRELIGKLGNIGGGGGS 116
Query: 105 GEITPHSLAPYINNNSNNNNGSSSTNASCYTTPLNSPPKLN---------------LPMS 149
EI+PHS P + + N ++STN SCY+TPL+SPPK+N +P S
Sbjct: 117 DEISPHS-QPLVGASFYINCNNNSTNTSCYSTPLSSPPKVNTIKIPTMVNHLVKEGMPPS 175
Query: 150 LGNSMPLNSSVAEFSADPGFAERAARFSRFGSRSFNGRSTGQFVPNHNPDQFGLSRSN-- 207
L M LNS+VA+FSADPGFAERAA+FS FGSRS NGR+T Q GL+ +
Sbjct: 176 LETPMSLNSTVAKFSADPGFAERAAKFSCFGSRSLNGRTT----------QLGLNNAELA 225
Query: 208 NNPNPMTANEKLPRVSSSPSLKVLGSQAQATGNK-SP-QDRSELANSQEESSVSEQVPND 265
+ + ++LPRVSSSPSLKVL SQ NK SP QD ELANSQEES++SEQ PN
Sbjct: 226 QRSSLVENGKRLPRVSSSPSLKVLESQMGTQENKNSPLQDLMELANSQEESTISEQTPNG 285
Query: 266 ---------FNSRKRKAVSKGKGKETAASPSVNNTTKVAEANASESSKNKRCKPNEGKAN 316
NSRKRK SKGK KET+AS + + A ASE KR KPN G+ N
Sbjct: 286 DTGVKPSPYVNSRKRKGPSKGKAKETSASINPPMGLSLQAAEASEDWNAKRSKPNAGEGN 345
Query: 317 GNGAVKAEDEG--------DDKQAKANNAKPPEPPKDYIHVRARRGQATDSHSLAERVRR 368
NG VKAE+E D+KQ K+N +KPPEPPKDYIHVRARRGQATDSHSLAERVRR
Sbjct: 346 ENGQVKAEEESKGGNSNANDEKQNKSN-SKPPEPPKDYIHVRARRGQATDSHSLAERVRR 404
Query: 369 EKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMKLASVNTRLELNVD 428
EKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMKLASVNTRL+ +++
Sbjct: 405 EKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMKLASVNTRLDFSIE 464
Query: 429 ALMSKDIYQPNKPLPHSIFQIDSSASAFFSHQPQQNPALHGNISNGTMTQCPVDPLDNAL 488
+L+SKDI+Q N L H IF IDSSA F+ PQ NPA+H NI NGTMT VDPLD L
Sbjct: 465 SLISKDIFQSNNSLAHPIFLIDSSAPPFYGQHPQPNPAVHNNIPNGTMTHNSVDPLDTGL 524
Query: 489 CRNLSMQLPQLEQFTETIPQFQN-FGEDDLQSIVQMGFGQNPNSETSLQSQSFHGSNQAP 547
C+NL M LP L F E Q+ F EDDL +I+QMGFGQN N T +QSQSF+GSNQ P
Sbjct: 525 CQNLGMHLPHLNDFNEGGSQYAKPFSEDDLHTIIQMGFGQNANRITPIQSQSFNGSNQVP 584
>gi|356558973|ref|XP_003547776.1| PREDICTED: transcription factor bHLH62-like [Glycine max]
Length = 548
Score = 538 bits (1387), Expect = e-150, Method: Compositional matrix adjust.
Identities = 329/563 (58%), Positives = 392/563 (69%), Gaps = 55/563 (9%)
Query: 29 IQATNEMMNCSSEQSSDCFFNPNNWEKST-DHSLQ-FDSALSSIVSS-PAASNS--NISN 83
IQ T +MNC+ EQ+ DCF+NPN W+KST DH L FDS+ S + S PAAS++ N SN
Sbjct: 3 IQLT--VMNCAPEQTQDCFYNPN-WDKSTADHGLHHFDSSALSSMVSSPAASSNPNNKSN 59
Query: 84 ESSVIRELIGKLGNIGNNSGAGEITPHSLAPYINNNSNNNNGSSSTNASCYTTPLNSPPK 143
E+ +IREL+GKLG IG++ + +PH L + ++ N+NG++ST SCY+TPL+SPPK
Sbjct: 60 ENFIIRELVGKLGPIGSSDEIPQHSPHPLV--VASSCMNSNGNNSTYTSCYSTPLSSPPK 117
Query: 144 LNLPMSLGN-----------SMPLNSSVAEFSADPGFAERAARFSRFGSRSFNGRSTGQF 192
+N+ SL N +M LNSSVAEFSADPGFAERAA+FS FGSRSFN RS
Sbjct: 118 VNIVHSLVNERLANLGGGKSTMALNSSVAEFSADPGFAERAAKFSCFGSRSFNDRSVQLG 177
Query: 193 VPNHNPDQFGLSRSNNNPNPMTANEKLPRVSSSPSLKVLGSQAQATGNKS-----PQDRS 247
V N Q + M KLPRVSSSP LK LGSQ A NK+ Q++
Sbjct: 178 VNNAELAQ-------RSAPAMEHGGKLPRVSSSPLLKTLGSQMGAQENKNSAIHQEQEKM 230
Query: 248 ELANSQEESSVSEQVPND----------FNSRKRKAVSKGKGKETAASPSVNNTTKVAEA 297
E ANSQEES++SEQ PN NSRKRKA SKGK KET+ S N TK E
Sbjct: 231 EGANSQEESTISEQAPNGEIGVKTSQDMMNSRKRKASSKGKAKETSNS---FNPTKGVEG 287
Query: 298 NASESSKNKRCKPNEGKANGNGAVKAEDEGDDKQAKAN--NAKPPEPPKDYIHVRARRGQ 355
SE S +KR KPNEG N NG VK E+E ++ K N N+KPPEPPKDYIHVRARRGQ
Sbjct: 288 --SEDSNSKRSKPNEGDGNENGQVKVEEESKAEEEKQNKSNSKPPEPPKDYIHVRARRGQ 345
Query: 356 ATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMK 415
ATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMK
Sbjct: 346 ATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMK 405
Query: 416 LASVNTRLELNVDALMSKDIYQPN---KPLPHSIFQIDSSASAFFSHQPQQ-NPALHGNI 471
LASVNTR++L+++ L+SKD++Q N LP+++F +DSSA F+ HQPQQ NP H NI
Sbjct: 406 LASVNTRMDLSIENLISKDVFQSNNSLATLPNAVFPLDSSAQTFYGHQPQQNNPVAHNNI 465
Query: 472 SNGTMTQCPVDPLDNALCRNLSMQLPQLEQFTETIPQF-QNFGEDDLQSIVQMGFGQNPN 530
N ++T C VDPLD +LC+NL+MQLP L F + QF F EDDL +IVQMGFGQ N
Sbjct: 466 PNRSVTHCSVDPLDTSLCQNLAMQLPPLNVFNDGGSQFPLAFLEDDLHTIVQMGFGQAAN 525
Query: 531 SETSLQSQSFHGSNQAPHMKAEL 553
+T +QS SF+GSN P MK EL
Sbjct: 526 RKTPIQSPSFNGSNNVPQMKVEL 548
>gi|356503048|ref|XP_003520324.1| PREDICTED: transcription factor bHLH62-like [Glycine max]
Length = 582
Score = 529 bits (1362), Expect = e-147, Method: Compositional matrix adjust.
Identities = 331/599 (55%), Positives = 406/599 (67%), Gaps = 63/599 (10%)
Query: 1 MENEFFLNAGIPA-----PVAMPI-----------WPSAAM-EIQIQATNEMMNCSSEQS 43
MEN+FFLN+G+ P+ + W S + + IQ T +MNC+SEQ+
Sbjct: 1 MENQFFLNSGVSQTQHHHPLHLESSPPSNPSSVPSWQSLSPPNMGIQPT--VMNCASEQT 58
Query: 44 S-DCFFNPNNWEKST--DHSLQ-FDSALSSIVSS-PAASNSNISNESS---VIRELIGKL 95
DCF+N +NW+KST D L FDS+ S + S PAAS++ +N S+ +IREL+GKL
Sbjct: 59 QQDCFYN-SNWDKSTTTDQGLHHFDSSALSSMVSSPAASSNPNNNMSNENFIIRELMGKL 117
Query: 96 GNIGNNSGAGEITPHSLAPYINNNSNNNNGSSSTNASCYTTPLNSPPKLNLPMSLGNSMP 155
G IGN+ + +PH L + ++ N G++STN SCY+TPL+SPPK+N+ SL +
Sbjct: 118 GAIGNSDEIPQHSPHPLV--VASSYMNTKGNNSTNTSCYSTPLSSPPKVNIVNSLSTTTV 175
Query: 156 LNSSVAEFSADPGFAERAARFSRFGSRSFNGRSTGQFVPNHNPDQFGLSRSNNNPNPMTA 215
LNSSVAEFSADPGFAERAA+FS FGSRSFN RS V N Q + M
Sbjct: 176 LNSSVAEFSADPGFAERAAKFSCFGSRSFNDRSVQLRVNNAELAQ-------RSAPAMEH 228
Query: 216 NEKLPRVSSSPSLKVLGSQAQATGNKS-----PQDRSELANSQEESSVSEQVPND----- 265
KLPRVSSSP LK LGSQ A NK+ Q++ E ANSQEES++SEQ PN
Sbjct: 229 GGKLPRVSSSPLLKTLGSQMGAQENKNSAIHQEQEKMEGANSQEESTISEQTPNGEIGVK 288
Query: 266 -----FNSRKRKAVSKGKGKETAASPSVNNTTKVAEANASESSKNKRCKPNEGKANGNGA 320
NSRKRKA SKGK KET+ + N TK E SE S +KR KPNEG NG
Sbjct: 289 TSQDIMNSRKRKASSKGKAKETS---NTTNPTKGVEG--SEYSNSKRSKPNEGNENGQVK 343
Query: 321 VKAEDEGDDKQAKANNAKPPEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQD 380
V+ E + ++++ +N+KPPEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQD
Sbjct: 344 VEEESKAEEEKQSKSNSKPPEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQD 403
Query: 381 LVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMKLASVNTRLELNVDALMSKDIYQPNK 440
LVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMKLASVNTR++L++++L++KD++Q N
Sbjct: 404 LVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMKLASVNTRMDLSIESLVTKDVFQSNN 463
Query: 441 PL---PHS-IFQIDSSASAFFSHQPQQ-NPALHGNISNGTMTQCPVDPLDNALCRNLSMQ 495
L P++ IF + SSA AF+ HQPQQ NP H NI N T+T C VDPLD +LC+NL+MQ
Sbjct: 464 SLATHPNAIIFPLGSSAQAFYGHQPQQNNPVFHNNIPNRTVTHCSVDPLDTSLCQNLAMQ 523
Query: 496 LPQLEQFTETIPQF-QNFGEDDLQSIVQMGFGQNPNSETSLQSQSFHGSNQAPHMKAEL 553
L L+ F E QF F EDDL +IVQMGFGQ N +T +QS SF+GSN P MK EL
Sbjct: 524 LSPLDVFNEGGSQFPLAFLEDDLHTIVQMGFGQAANRKTPIQSSSFNGSNNVPQMKVEL 582
>gi|388499536|gb|AFK37834.1| unknown [Lotus japonicus]
Length = 493
Score = 491 bits (1263), Expect = e-136, Method: Compositional matrix adjust.
Identities = 299/564 (53%), Positives = 360/564 (63%), Gaps = 89/564 (15%)
Query: 1 MENEFFLNAGIPAPV----AMPIWPSAAMEIQIQATNEMMNCSSEQSSDCFFNPNNWEKS 56
MEN+FF N G+P + +MP W S SSEQ+ DCF+N WE S
Sbjct: 1 MENQFFSNGGVPPQLHFDPSMPTWQSPPPP-----------QSSEQNQDCFYNTQTWENS 49
Query: 57 TDH-SLQFDSALSSIVSSPAASNSNISNESSVIRELIGKLGNIGNNSGAGEITPHSLAPY 115
TDH +L FDSA+SS+VSSPAASNSN+S+++ IRELIGK G EI+P L
Sbjct: 50 TDHHALHFDSAMSSMVSSPAASNSNMSSDNFAIRELIGK--LGNIGGGGDEISPGFL--- 104
Query: 116 INNNSNNNNGSSSTNASCYTTPLNSPPKLNLPMSLGNSMPLNSSVAEFSADPGFAERAAR 175
SM LNS+VAEFS+DPGFA RAA+
Sbjct: 105 ------------------------------------KSMALNSTVAEFSSDPGFAARAAK 128
Query: 176 FSRFGSRSFNGRSTGQFVPNHNPDQFGLSRSNNNPNPMTANEKLPRVSSSPSLKVLGSQA 235
FS GSRSFNGR + Q N+N + L++S +P+ M LPRVSSSPSLK+LGSQ
Sbjct: 129 FSCIGSRSFNGRGS-QLGLNNNAE---LTQSQRSPSLMENGMLLPRVSSSPSLKLLGSQM 184
Query: 236 QATGNKSPQDRSELANSQEESSVSEQVPND-FNSRKRKAVSKGKGKETAASPSVNNTTKV 294
+ T NSQEES++SEQ P+ NSRKRKA S+GK KET VN+T
Sbjct: 185 EGT------------NSQEESTISEQKPSPCVNSRKRKASSRGKAKET-----VNSTNPP 227
Query: 295 AEANASESSKNKRCKPNEGKAN-GNGAVKAEDE-------GDDKQAKANNAKPPEPPKDY 346
+A ASE KR KPNE + NG+VKAE++ G D++ +++KPPEPPKDY
Sbjct: 228 MDAEASEDQNAKRGKPNEDEGKEKNGSVKAEEDSKAGTSSGGDEKQNMSSSKPPEPPKDY 287
Query: 347 IHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQ 406
IHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYV+SLQ
Sbjct: 288 IHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVRSLQ 347
Query: 407 RQVEFLSMKLASVNTRLELNVDALMSKDIYQPNKPLPHSIFQIDSSASAFFSHQPQQNPA 466
RQVEFLSMKL+SVNTRL+ + ++L+SKDI+Q N L +F +DSSA AF+ QPQQN A
Sbjct: 348 RQVEFLSMKLSSVNTRLDFSTESLISKDIFQSNNSLAQPLFPLDSSAQAFYGQQPQQNSA 407
Query: 467 LHGNISNGTMTQCPVDPLDNA-LCRNLSMQLPQLEQFTETIPQF-QNFGEDDLQSIVQMG 524
+H N NGT+T VDPL LC+NL MQL L E QF F EDDL +IVQMG
Sbjct: 408 IHNNFPNGTVTHTSVDPLHTGDLCQNLGMQLLPLNGINEGGSQFPLTFSEDDLHTIVQMG 467
Query: 525 FGQNPNSETSLQSQSFHGSNQAPH 548
FGQ N +T ++ QS +GSNQ P+
Sbjct: 468 FGQTANRKTPIRFQSINGSNQVPY 491
>gi|359477937|ref|XP_002264969.2| PREDICTED: transcription factor bHLH62-like [Vitis vinifera]
Length = 569
Score = 461 bits (1187), Expect = e-127, Method: Compositional matrix adjust.
Identities = 300/609 (49%), Positives = 378/609 (62%), Gaps = 96/609 (15%)
Query: 1 MENE-FFLNAGIPAPVAMPIWPSAAMEIQIQATNEMMNCSSEQSSDCFFNPNNWEKSTDH 59
ME E F+N G + P W + MEIQ +NE+ NCSS+ +CF NPN W+ S D
Sbjct: 1 MEKERLFMNEG--NCITPPNW-NLGMEIQ---SNEL-NCSSQAVQNCFLNPN-WDNSMDQ 52
Query: 60 SLQFDSALSSIVSSPAASNSN-ISNESSVIRELIGKLGNIGNNSGAGEITPHSLAPYINN 118
S F+SALSSIVSSP S++ + +S IRELIG+LG+I N +GEI+P S YI
Sbjct: 53 SDPFESALSSIVSSPVGSSAGGMPGDSIAIRELIGRLGSICN---SGEISPQS---YIGG 106
Query: 119 NSNNNNGSSSTNASCYTTPLNSPPKLNLPMS-----------LGNSMPLNSSVAEFSADP 167
+ N ++S N SCY TPLNSPPKLNL + N +P + S+A F ADP
Sbjct: 107 GGHGNT-NNSNNTSCYNTPLNSPPKLNLSIMDHQQHQIRTNFPTNHLPTHPSLAPFPADP 165
Query: 168 GFAERAARFSRFGSRSFNGRSTGQFVPNHNPDQFGLSRSNNNPNPM-TANEKLPRVSSSP 226
GFAERAARFS FG+ +F+G S QFGL N+ P ++ KL RVSS+
Sbjct: 166 GFAERAARFSCFGTGNFSGLSA----------QFGL---NDTELPYRSSTGKLSRVSSNQ 212
Query: 227 SLKVLGSQ--AQATGNKSPQ--------------------DRSELANSQEESSVSEQVP- 263
S K GSQ AQ ++SP D +EL +S+EESSVSEQ+P
Sbjct: 213 SFKAAGSQLGAQEFKDRSPPQDGVSASDKKLGKISRSSTPDNTELGDSREESSVSEQIPG 272
Query: 264 --------NDFNSRKRKAVSKGKGKETAASPSVNNTTKVAEANASESSKNKRCKPNEGKA 315
ND N RKRK++ +GK KE +SPS + ++ + S + KR KP+EG
Sbjct: 273 GETSLKGQNDANGRKRKSIPRGKAKEVPSSPSAKDAKVASDKDESNA---KRSKPDEGSG 329
Query: 316 NG----------NGAVKAEDEGDDKQAKANNAKPPEPPKDYIHVRARRGQATDSHSLAER 365
+ NG+ K+ +G+ KQ+K +N KPPE PKDYIHVRARRGQATDSHSLAER
Sbjct: 330 SEKDAAKAKAEANGSTKSAGDGNQKQSK-DNPKPPEAPKDYIHVRARRGQATDSHSLAER 388
Query: 366 VRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMKLASVNTRLEL 425
VRREKISERMK LQDLVPGCNKVTGKA+MLDEIINYVQSLQRQVEFLSMKLA+VN R++
Sbjct: 389 VRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRMDF 448
Query: 426 NVDALMSKDIYQPNKPLPHSIFQIDSSASAF-FSHQPQQNPALHGNISNGTMTQCPVDPL 484
N++AL+SK+I+Q LP +++ +DSSA AF + +QPQQ P+L I NGT T V+PL
Sbjct: 449 NMEALLSKEIFQSRGSLPQAMYPLDSSALAFPYGYQPQQGPSLQNGIPNGTETPFSVNPL 508
Query: 485 DNALCRNLSMQLPQLEQFTETIPQFQNFGEDDLQSIVQMGFGQNPNSETSLQSQSFHGSN 544
++A+ R SM LP ++ F E Q F ED+L S+VQMG GQN Q Q F GS
Sbjct: 509 NSAIRRTSSM-LPSIDGFGEAASQVSTFWEDELHSVVQMGIGQN-------QPQGFPGSM 560
Query: 545 QAPHMKAEL 553
A MK EL
Sbjct: 561 GAAQMKIEL 569
>gi|147786897|emb|CAN73299.1| hypothetical protein VITISV_005183 [Vitis vinifera]
Length = 569
Score = 460 bits (1184), Expect = e-127, Method: Compositional matrix adjust.
Identities = 301/610 (49%), Positives = 378/610 (61%), Gaps = 98/610 (16%)
Query: 1 MENE-FFLNAG-IPAPVAMPIWPSAAMEIQIQATNEMMNCSSEQSSDCFFNPNNWEKSTD 58
ME E F+N G P P W + MEIQ +NE+ NCSS+ +CF NPN W+ S D
Sbjct: 1 MEKERLFMNEGNCTTP---PNW-NFGMEIQ---SNEL-NCSSQAVQNCFLNPN-WDNSMD 51
Query: 59 HSLQFDSALSSIVSSPAASNSN-ISNESSVIRELIGKLGNIGNNSGAGEITPHSLAPYIN 117
S F+SALSSIVSSP S++ + +S IRELIG+LG+I N +GEI+P S YI
Sbjct: 52 QSDPFESALSSIVSSPVGSSAGGMPGDSIAIRELIGRLGSICN---SGEISPQS---YIG 105
Query: 118 NNSNNNNGSSSTNASCYTTPLNSPPKLNLPMS-----------LGNSMPLNSSVAEFSAD 166
+ N ++S N SCY TPLNSPPKLNL + N +P + S+A F AD
Sbjct: 106 GGGHGNT-NNSNNTSCYNTPLNSPPKLNLSIMDHQQHQIRTNFPTNHLPTHPSLAPFPAD 164
Query: 167 PGFAERAARFSRFGSRSFNGRSTGQFVPNHNPDQFGLSRSNNNPNPM-TANEKLPRVSSS 225
PGFAERAARFS FG+ +F+G S QFGL N+ P ++ KL RVSS+
Sbjct: 165 PGFAERAARFSCFGTGNFSGLSA----------QFGL---NDTELPYRSSTGKLSRVSSN 211
Query: 226 PSLKVLGSQ--AQATGNKSPQ--------------------DRSELANSQEESSVSEQVP 263
S K GSQ AQ ++SP D +EL +S+EESSVSEQ+P
Sbjct: 212 QSFKAAGSQLGAQEFKDRSPPQDGVSASDKKLGKISRSSTPDNAELGDSREESSVSEQIP 271
Query: 264 ---------NDFNSRKRKAVSKGKGKETAASPSVNNTTKVAEANASESSKNKRCKPNEGK 314
ND N RKRK++ +GK KE +SPS + ++ + S + KR KP+EG
Sbjct: 272 GGETSLKGQNDANGRKRKSIPRGKAKEVPSSPSAKDAKVASDKDESNA---KRSKPDEGS 328
Query: 315 ANG----------NGAVKAEDEGDDKQAKANNAKPPEPPKDYIHVRARRGQATDSHSLAE 364
+ NG+ K+ +G+ KQ+K +N KPPE PKDYIHVRARRGQATDSHSLAE
Sbjct: 329 GSEKDAAKAKAEANGSTKSAGDGNQKQSK-DNPKPPEAPKDYIHVRARRGQATDSHSLAE 387
Query: 365 RVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMKLASVNTRLE 424
RVRREKISERMK LQDLVPGCNKVTGKA+MLDEIINYVQSLQRQVEFLSMKLA+VN R++
Sbjct: 388 RVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRMD 447
Query: 425 LNVDALMSKDIYQPNKPLPHSIFQIDSSASAF-FSHQPQQNPALHGNISNGTMTQCPVDP 483
N++AL+SK+I+Q LP +++ +DSSA AF + +QPQQ P+L I NGT T V+P
Sbjct: 448 FNMEALLSKEIFQSRGSLPQAMYPLDSSALAFPYGYQPQQGPSLQNGIPNGTETPFSVNP 507
Query: 484 LDNALCRNLSMQLPQLEQFTETIPQFQNFGEDDLQSIVQMGFGQNPNSETSLQSQSFHGS 543
L++A+ R SM LP ++ F E Q F ED+L S+VQMG GQN Q Q F GS
Sbjct: 508 LNSAIRRTSSM-LPSIDGFGEAASQVSTFWEDELHSVVQMGIGQN-------QPQGFPGS 559
Query: 544 NQAPHMKAEL 553
A MK EL
Sbjct: 560 MGAAQMKIEL 569
>gi|357513299|ref|XP_003626938.1| BHLH transcription factor [Medicago truncatula]
gi|355520960|gb|AET01414.1| BHLH transcription factor [Medicago truncatula]
Length = 498
Score = 459 bits (1181), Expect = e-126, Method: Compositional matrix adjust.
Identities = 292/583 (50%), Positives = 354/583 (60%), Gaps = 115/583 (19%)
Query: 1 MENEFFLNAGIPAPVAMPIWPSAAMEIQIQATNEMMNCSSEQSSDCFFNPNNWEKSTDHS 60
MEN+FFLNAG Q+ DCFFNPN W+KSTD +
Sbjct: 1 MENQFFLNAGFEP---------------------------YQTQDCFFNPN-WDKSTDQN 32
Query: 61 LQFDSALSSIVSSPAAS----NSNISNESSVIRELIGKLGNIGNNSGAGEITPHSLAPYI 116
L +DS LSSIVSSPAA+ N N+SNE+ V+RELIGKLG G EI+ HS P +
Sbjct: 33 LNYDSTLSSIVSSPAATSSPSNPNMSNENFVMRELIGKLGTFG------EISQHSSNPLV 86
Query: 117 NNNSNNNNGSSSTNASCYTTPLNSPPKLNLPMSLGNSMPLNSSVAEFSADPGFAERAARF 176
+P+ S VAEFS DPGF +RAA+F
Sbjct: 87 -------------------------------------LPMMSRVAEFSPDPGFVQRAAKF 109
Query: 177 SRFGSRSFNGRSTGQFVPNHNPDQFGLSRSNNNPNPMTANEKLPRVSSSPSLKVLGSQAQ 236
S FGS+SFN R Q V N+ + + + N M KL RVSSSPSLK GSQ
Sbjct: 110 SCFGSKSFNERGN-QMVMNN------VELAQRSHNLMENGMKLSRVSSSPSLKTFGSQMV 162
Query: 237 ATGNKS-----PQDRSELANSQEESSVSEQ-VPN---------DFNSRKRKAVSKGKGKE 281
NK+ ++ E+ANSQEES +SEQ PN D NSRKRKA S KGK
Sbjct: 163 NHENKNSSLQQENEKMEVANSQEESKISEQNTPNGEIGVKASPDMNSRKRKA-SSSKGK- 220
Query: 282 TAASPSVNNTTKVAEANASESSKNKRCKPNEGKANGNGAVKAEDE--------GDDKQAK 333
+P+ N TK E + E K+ K NEG+ N NG E+E G++KQ K
Sbjct: 221 ---APNSTNPTKGVEG-SGEDFNAKKIKANEGERNENGVRNMEEEIKEGTPNAGEEKQNK 276
Query: 334 ANNAKPPEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKAL 393
++ +KPPEP KDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKAL
Sbjct: 277 SD-SKPPEPQKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKAL 335
Query: 394 MLDEIINYVQSLQRQVEFLSMKLASVNTRLELNVDAL-MSKDIYQPNKPLPHSIFQIDSS 452
MLDEIINYVQSLQRQVEFLSMKL+SVNT+++L++++L +SKDI+Q N L +SIFQ+DSS
Sbjct: 336 MLDEIINYVQSLQRQVEFLSMKLSSVNTKMDLSIESLVVSKDIFQSNNSLQNSIFQLDSS 395
Query: 453 ASAFFSHQPQQNPALHGNISNGTMTQCPVDPLDNALCRNLSMQLPQLEQFTETIPQFQ-- 510
+F+ QPQQN A+H NI N + C V+PLD++LC N+ M LP L F E Q
Sbjct: 396 VPSFYGQQPQQNQAIHNNIPNTNGSHCSVEPLDSSLCHNIGMHLPFLNGFNEGGSQQYPL 455
Query: 511 NFGEDDLQSIVQMGFGQNPNSETSLQSQSFHGSNQAPHMKAEL 553
F E+DL ++VQMGFGQ N T + S SF+GSNQ+ MK EL
Sbjct: 456 TFSEEDLNTVVQMGFGQTSNRNTPIHSPSFNGSNQSTQMKIEL 498
>gi|224128880|ref|XP_002320444.1| hypothetical protein POPTRDRAFT_572918 [Populus trichocarpa]
gi|222861217|gb|EEE98759.1| hypothetical protein POPTRDRAFT_572918 [Populus trichocarpa]
Length = 568
Score = 425 bits (1092), Expect = e-116, Method: Compositional matrix adjust.
Identities = 289/603 (47%), Positives = 371/603 (61%), Gaps = 90/603 (14%)
Query: 3 NEFFLNAGIPAPVAMPIWPSAAMEIQIQATNEMMNCSSEQSSDCFFNPNNWEKSTDHSLQ 62
++ F++ G A A IW S + +++QA NE+ +C E+ ++CF NPN W+ S D S
Sbjct: 4 DKLFVSEG--ANTAATIWNSCSFGMEMQA-NEL-SCGPEKLANCFLNPN-WDNSLDQSDP 58
Query: 63 FDSALSSIVSSPAASNS----------NISNESSVIRELIGKLGNIGNNSGAGEITPHSL 112
F+SALSSIVSSP AS + + +S +IRELIG+LGNI N +G+I+ S
Sbjct: 59 FESALSSIVSSPVASGANANANAIPNAGVGGDSLMIRELIGRLGNICN---SGDISLQSF 115
Query: 113 APYINNNSNNNNGSSSTNASCYTTPLNSPPKLNLPMSL----------GNSMPLNSSVAE 162
NN ++STN SCY+TP+NSPPKLNL M GNS+ + +A
Sbjct: 116 V---------NNNNNSTNTSCYSTPMNSPPKLNLSMMDSQMRGNLPIPGNSVVKHPGLAP 166
Query: 163 FSADPGFAERAARFSRFGSRSFNGRSTGQFVPNHNPDQFGLSRSN--NNPNPMTANEKLP 220
F AD F ERAAR+S FGS + G + QFGL+ S N P KL
Sbjct: 167 FPAD--FVERAARYSCFGSNNPGGINK----------QFGLNESELINRLMPRVEPGKLS 214
Query: 221 RVSSSPSLKVLGSQA--QATGNKSPQD----------------RSELANSQEESSVSEQV 262
RVSS+ S+KV SQA Q + SPQD SE +S+EESS+SEQV
Sbjct: 215 RVSSNNSMKVTVSQANVQESNKSSPQDGSLNSEKKFSRQSRPTTSENGDSREESSLSEQV 274
Query: 263 P---------NDFNSRKRKAVSKGKGKETAASPSVNNTTKVAEANASESSKNKRCKPNEG 313
P ND NSRKRK++ +GK KET +S + KVA N + SK KR K +E
Sbjct: 275 PGGKLSMKSQNDANSRKRKSIPRGKAKETPSSSPSASDVKVAAEN--DESKAKRSKSDET 332
Query: 314 K-ANGNGAVKAEDEGDDKQAKANNAKPPEPPKDYIHVRARRGQATDSHSLAERVRREKIS 372
++ + A + E+E +++ NN+KPPEPPKDYIHVRARRGQATDSHSLAERVRREKIS
Sbjct: 333 NGSDKDTAKEKEEENGNQKQNKNNSKPPEPPKDYIHVRARRGQATDSHSLAERVRREKIS 392
Query: 373 ERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMKLASVNTRLELNVDALMS 432
ERMK LQDLVPGCNKVTGKA+MLDEIINYVQSLQRQVEFLSMKL+SVN R+E+N++ L+S
Sbjct: 393 ERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSMKLSSVNPRMEINMETLLS 452
Query: 433 KDIYQPNKPLPHSIFQIDSSASAF-FSHQPQQNPALHGNISNGTMTQCPVDPLDNALCRN 491
KDI+Q +PHS++ +D+S F + +Q QQ AL + + TQ ++PL+ AL RN
Sbjct: 453 KDIFQSRGSMPHSLYPLDASTPVFPYGYQSQQGLALQNGMPSNAETQFSMNPLNAALRRN 512
Query: 492 LSMQLPQLEQFTE-TIPQFQNFGEDDLQSIVQMGFGQNPNSETSLQSQSFHGSNQAPHMK 550
SM LP L+ F + Q EDDLQS+VQMG+GQN +SF GS + HMK
Sbjct: 513 PSMHLPHLDGFGDPAALQASAMWEDDLQSVVQMGYGQN-------HQESFQGSVPSTHMK 565
Query: 551 AEL 553
EL
Sbjct: 566 IEL 568
>gi|449527227|ref|XP_004170614.1| PREDICTED: transcription factor bHLH62-like [Cucumis sativus]
Length = 450
Score = 403 bits (1036), Expect = e-109, Method: Compositional matrix adjust.
Identities = 281/529 (53%), Positives = 327/529 (61%), Gaps = 96/529 (18%)
Query: 34 EMMNCSSEQSS---DCFFNPNNWEKSTDHSLQFDSALSSIVSSPAASNSNISNESSVIRE 90
++ +CSS DCF NP +D S QFDSALSS+VSSPAASNSNI+NES IRE
Sbjct: 9 DLTHCSSSSHQSPPDCFLNP-----VSDQSFQFDSALSSMVSSPAASNSNITNESFAIRE 63
Query: 91 LIGKLGNIGNNSGAGEITPHSLAPYINNNSNNNNGSSSTNASCYTTPLNSPPKLNLPMSL 150
LIGKLG G E L S+ST A+ LP
Sbjct: 64 LIGKLG------GNSERRILEL-------------SNSTAAAA------------LP--- 89
Query: 151 GNSMPLNSSVAEFSADPGFAERAARFSRFGSRSFNGRSTGQFVPNHNPDQFGLSRSNNNP 210
P +SSVAEFS+DPGFAERAARFS FGSRSFNGR ++FG RS+ +
Sbjct: 90 ----PSSSSVAEFSSDPGFAERAARFSCFGSRSFNGRQLT--------NEFGNYRSHLS- 136
Query: 211 NPMTANEKLPRVSSSPSLKVLGSQAQATGNKSPQDRSELANSQE-ESSVSEQVPNDFNSR 269
NEKL RVSSSPSLK LGS+ Q+ ++SQE ESS+S Q N R
Sbjct: 137 ---IGNEKLSRVSSSPSLKALGSEMNL------QEHKNNSSSQEDESSLSNQDKTITNPR 187
Query: 270 KRKAVSKGKGKETAASPSVNNTTKVAEANASESSKNKRCKPNEGKANGNGAVK-AEDEGD 328
KRKA++K K KE + +E K KR NG G + E+ +
Sbjct: 188 KRKAITKAKLKEPLL------PKRKSEEVEDSGKKGKR-------ENGRGFEENDENSAE 234
Query: 329 DKQAKANNAKPPEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKV 388
+KQ KAN +KPPE PKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKV
Sbjct: 235 EKQTKAN-SKPPEAPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKV 293
Query: 389 TGKALMLDEIINYVQSLQRQVEFLSMKLASVN-TRLELNVDALM-SKDIYQPNKPLPH-S 445
TGKALMLDEIINYVQSLQ QVEFLSMKLASVN TR++ NVD+L+ SK +YQ L H
Sbjct: 294 TGKALMLDEIINYVQSLQHQVEFLSMKLASVNTTRVDFNVDSLISSKQMYQSGTSLTHPQ 353
Query: 446 IFQIDSSASAFFSHQPQQNPALHGNISNGTMTQCPVDPLDNALCRNLSMQLPQLEQFTET 505
I IDSSAS+F+ HQ N S T + C VDP+D+ LC+NL +QLP L F +
Sbjct: 354 ISPIDSSASSFYGHQ---------NSSLPTTSHCSVDPIDSVLCQNLPIQLPPLNSFLQN 404
Query: 506 IPQFQNFGEDDLQSIVQMGFGQNPNSETSLQSQSFH-GSNQAPHMKAEL 553
Q+ NFGED+LQSIVQMGF QN E SLQS +F+ GS+Q MK EL
Sbjct: 405 PSQYPNFGEDELQSIVQMGFVQNQTQEISLQSHNFNLGSDQ---MKIEL 450
>gi|255550670|ref|XP_002516384.1| transcription factor, putative [Ricinus communis]
gi|223544482|gb|EEF46001.1| transcription factor, putative [Ricinus communis]
Length = 534
Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust.
Identities = 276/561 (49%), Positives = 362/561 (64%), Gaps = 70/561 (12%)
Query: 1 MENE-FFLNAGIPAPVAMPIWPSAAMEIQIQATNEMMNCSSEQSSDCFFNPNNWEKSTDH 59
ME E F++ G+ + +PIW S ++I ++NE+ +S+Q + FFN +NWE S D
Sbjct: 1 MEKEKLFMSEGVNS-REVPIWNSCNFGMEISSSNEL---NSDQIPNSFFN-SNWENSMDQ 55
Query: 60 SLQFDSALSSIVSSP---AASNSNISNESSVIRELIGKLGNIGNNSGAGEITPHSLAPYI 116
S F+SALSSIVSSP A NSN + +IRELIG+LGNI N + +I+P S YI
Sbjct: 56 SDPFESALSSIVSSPNANAVPNSN--GDPVMIRELIGRLGNICN---SRDISPQS---YI 107
Query: 117 NNNSNNNNGSSSTNASCYTTPLNSPPKLNLPM----SLGNS-------MPLNSSVAEFSA 165
N N+ ++STN SCYTTPLNSPPKLN+ + GN+ +P+ +S+A A
Sbjct: 108 NTNN-----NNSTNTSCYTTPLNSPPKLNISILDSQIRGNTNTNNSHNLPI-ASLAPLPA 161
Query: 166 DPGFAERAARFSRFGS-RSFNGRSTGQFVPNHNPDQFGLSRSNNNPNPMTANEKLP--RV 222
DPGF ERAARFS FGS R+ +G S GQF N + + + + N + + +
Sbjct: 162 DPGFVERAARFSCFGSSRNLSGLS-GQFGSNESSFLSRIPATGSQVNASNVQQAVADGKP 220
Query: 223 SSSPSLKVLGSQAQATGNKSPQDRSELANSQEESSVSEQVP-----------NDFNSRKR 271
+S L V+ S + +E +S+EESS+SEQ+P NDF+ RKR
Sbjct: 221 NSDRKLNVIS-------RSSTPENAEFGDSREESSLSEQIPGGELSIKVQNNNDFSVRKR 273
Query: 272 KAVSKGKGKET-AASPSVNNTTKVAEANASESSKNKRCKPNEGKANGNGAVKAEDEGDDK 330
KA+ +GK KET ++SPS ++ AE + S + KR K +E ANG+ KAE G+ K
Sbjct: 274 KAIPRGKAKETPSSSPSASDVKVAAEKDESTA---KRSKSDE--ANGHDKAKAEQNGNQK 328
Query: 331 QAKANNAKPPEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTG 390
Q K +N K PEPPKDYIHVRARRGQATDSHSLAERVRREKISERMK LQDLVPGCNKVTG
Sbjct: 329 QNK-DNTKLPEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTG 387
Query: 391 KALMLDEIINYVQSLQRQVEFLSMKLASVNTRLELNVDALMSKDIYQPNKPLPHSIFQID 450
KA+MLDEIINYVQSLQRQVEFLSMKLA+VN R+++N++AL SKD++Q LPHS++ +D
Sbjct: 388 KAVMLDEIINYVQSLQRQVEFLSMKLATVNPRMDVNMEAL-SKDVFQSFGSLPHSLYPLD 446
Query: 451 SSASAF--FSHQPQQNPALHGNISNGTMTQCPVDPLDNALCRNLSMQLPQLEQFTETIP- 507
SSA+ +S+Q QQ L ++S+ TQ ++ L L RN SMQLP L+ F +
Sbjct: 447 SSAALALPYSYQSQQGVPLPNDMSSNAETQFSMNAL---LRRNHSMQLPPLDGFGDAAAR 503
Query: 508 QFQNFGEDDLQSIVQMGFGQN 528
Q F E++LQS+VQMGF QN
Sbjct: 504 QVSAFWEEELQSVVQMGFVQN 524
>gi|298205236|emb|CBI17295.3| unnamed protein product [Vitis vinifera]
Length = 457
Score = 397 bits (1019), Expect = e-108, Method: Compositional matrix adjust.
Identities = 258/549 (46%), Positives = 319/549 (58%), Gaps = 131/549 (23%)
Query: 25 MEIQIQATNEMMNCSSEQSSDCFFNPNNWEKSTDHSLQFDSALSSIVSSPAASNSNISNE 84
MEIQ +NE+ NCSS+ +CF NPN W+ S D S F+SALSSIVSSP S
Sbjct: 1 MEIQ---SNEL-NCSSQAVQNCFLNPN-WDNSMDQSDPFESALSSIVSSPVGS------- 48
Query: 85 SSVIRELIGKLGNIGNNSGAGEITPHSLAPYINNNSNNNNGSSSTNASCYTTPLNSPPKL 144
SG G +S N SCY TPLNSPPKL
Sbjct: 49 -----------------SGHGNTN------------------NSNNTSCYNTPLNSPPKL 73
Query: 145 NLPMS-----------LGNSMPLNSSVAEFSADPGFAERAARFSRFGSRSFNGRSTGQFV 193
NL + N +P + S+A F ADPGFAERAARFS FG+ +F+G S
Sbjct: 74 NLSIMDHQQHQIRTNFPTNHLPTHPSLAPFPADPGFAERAARFSCFGTGNFSGLSA---- 129
Query: 194 PNHNPDQFGLSRSNNNPNPMTANEKLPRVSSSPSLKVLGSQAQATGNKSPQDRSELANSQ 253
QFGL+ + +LP SS TG K L +S+
Sbjct: 130 ------QFGLN-----------DTELPYRSS-------------TGWK-------LGDSR 152
Query: 254 EESSVSEQVP---------NDFNSRKRKAVSKGKGKETAASPSVNNTTKVAEANASESSK 304
EESSVSEQ+P ND N RKRK++ +GK KE +SPS + ++ + S +
Sbjct: 153 EESSVSEQIPGGETSLKGQNDANGRKRKSIPRGKAKEVPSSPSAKDAKVASDKDESNA-- 210
Query: 305 NKRCKPNEGKANG----------NGAVKAEDEGDDKQAKANNAKPPEPPKDYIHVRARRG 354
KR KP+EG + NG+ K+ +G+ KQ+K +N KPPE PKDYIHVRARRG
Sbjct: 211 -KRSKPDEGSGSEKDAAKAKAEANGSTKSAGDGNQKQSK-DNPKPPEAPKDYIHVRARRG 268
Query: 355 QATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSM 414
QATDSHSLAERVRREKISERMK LQDLVPGCNKVTGKA+MLDEIINYVQSLQRQVEFLSM
Sbjct: 269 QATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSM 328
Query: 415 KLASVNTRLELNVDALMSKDIYQPNKPLPHSIFQIDSSASAF-FSHQPQQNPALHGNISN 473
KLA+VN R++ N++AL+SK+I+Q LP +++ +DSSA AF + +QPQQ P+L I N
Sbjct: 329 KLATVNPRMDFNMEALLSKEIFQSRGSLPQAMYPLDSSALAFPYGYQPQQGPSLQNGIPN 388
Query: 474 GTMTQCPVDPLDNALCRNLSMQLPQLEQFTETIPQFQNFGEDDLQSIVQMGFGQNPNSET 533
GT T V+PL++A+ R SM LP ++ F E Q F ED+L S+VQMG GQN
Sbjct: 389 GTETPFSVNPLNSAIRRTSSM-LPSIDGFGEAASQVSTFWEDELHSVVQMGIGQN----- 442
Query: 534 SLQSQSFHG 542
Q Q F G
Sbjct: 443 --QPQGFPG 449
>gi|15231450|ref|NP_187390.1| transcription factor bHLH62 [Arabidopsis thaliana]
gi|75313804|sp|Q9SRT2.1|BH062_ARATH RecName: Full=Transcription factor bHLH62; AltName: Full=Basic
helix-loop-helix protein 62; Short=AtbHLH62; Short=bHLH
62; AltName: Full=Transcription factor EN 85; AltName:
Full=bHLH transcription factor bHLH062
gi|6041855|gb|AAF02164.1|AC009853_24 unknown protein [Arabidopsis thaliana]
gi|51968880|dbj|BAD43132.1| putative bHLH transcription factor (bHLH062) [Arabidopsis thaliana]
gi|51969134|dbj|BAD43259.1| putative bHLH transcription factor (bHLH062) [Arabidopsis thaliana]
gi|111074462|gb|ABH04604.1| At3g07340 [Arabidopsis thaliana]
gi|332641009|gb|AEE74530.1| transcription factor bHLH62 [Arabidopsis thaliana]
Length = 456
Score = 394 bits (1012), Expect = e-107, Method: Compositional matrix adjust.
Identities = 261/561 (46%), Positives = 317/561 (56%), Gaps = 113/561 (20%)
Query: 1 MENEFFLNAGIPAPVAMPIWPSAAMEIQIQATNEMMNCSSEQSSDCFFNPNNWEKSTDHS 60
MENE F+NAG+ P M PS++ + + E S + F WEKST+ S
Sbjct: 1 MENELFMNAGVSHPPVM-TSPSSSSAMLKWVSMETQPVDPSLSRNLF-----WEKSTEQS 54
Query: 61 LQFDSALSSIVSSPAASNSNIS-----NESSVIRELIGKLGNIGNNSGAGEITPHSLAPY 115
+ FDSALSS+VSSP SNSN S E+ ++RELIGKLGNIG+ G
Sbjct: 55 I-FDSALSSLVSSPTPSNSNFSVGGVGGENVIMRELIGKLGNIGDIYGI----------- 102
Query: 116 INNNSNNNNGSSSTNASCYTTPLNSPPKLNLPMSLGNSMPLNSSVAEFSADPGFAERAAR 175
++S SCY TP++SPP ++ M + P+ AE S DPGFAERAAR
Sbjct: 103 ----------TASNGNSCYATPMSSPPPGSM-METKTTTPM----AELSGDPGFAERAAR 147
Query: 176 FSRFGSRSFNGRSTGQFVPNHNPDQFGLSRSNNNPNPMTANEKLPRVSSSPSLKVLGSQA 235
FS FGSRSFN R+ F N+ P P+T NEK+PRVSSSP K L S
Sbjct: 148 FSCFGSRSFNSRTNSPFPINNEP-------------PITTNEKMPRVSSSPVFKPLASHV 194
Query: 236 QATGNKSPQDRSELANSQEESSVSEQVPNDFNSRKRKAVSKGKGKETAASPSVNNTTKVA 295
A + EL SRKRK SK SPS +++K
Sbjct: 195 PAG-----ESSGEL------------------SRKRKTKSKQN------SPSAVSSSK-- 223
Query: 296 EANASESSKNKRCKPNEGKANGNGAVKAEDEGDDKQAKANNAKPPEPPKDYIHVRARRGQ 355
E E S KRCK K+E+ GD K +P KDYIHVRARRGQ
Sbjct: 224 EIEEKEDSDPKRCK------------KSEENGD-------KTKSIDPYKDYIHVRARRGQ 264
Query: 356 ATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMK 415
ATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMK
Sbjct: 265 ATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMK 324
Query: 416 LASVNTRLELNVDALMSKDIYQPNKPLPH--SIFQIDSSASAFFSHQPQQNPALHGNISN 473
L+SVNTRL+ N+DAL+SKDI+ + L H + Q+DSSA +N L+ +IS+
Sbjct: 325 LSSVNTRLDFNMDALLSKDIFPSSNNLMHHQQVLQLDSSAETLLGDHHNKNLQLNPDISS 384
Query: 474 GTMTQCPVDPLDNALCRNLSMQLPQLEQFTETIPQFQNFGEDDLQSIVQMGFGQNPNSET 533
+ ++PL+ + R+ LP L FT++I Q+ F EDDL SI+ MGF QN
Sbjct: 385 NNV----INPLETSETRSFISHLPTLAHFTDSISQYSTFSEDDLHSIIHMGFAQN----- 435
Query: 534 SLQSQSFHGSNQAP-HMKAEL 553
LQ + SNQ P HMKAEL
Sbjct: 436 RLQELNQGSSNQVPSHMKAEL 456
>gi|51971323|dbj|BAD44326.1| putative bHLH transcription factor (bHLH062) [Arabidopsis thaliana]
gi|51971523|dbj|BAD44426.1| putative bHLH transcription factor (bHLH062) [Arabidopsis thaliana]
Length = 456
Score = 391 bits (1005), Expect = e-106, Method: Compositional matrix adjust.
Identities = 260/561 (46%), Positives = 316/561 (56%), Gaps = 113/561 (20%)
Query: 1 MENEFFLNAGIPAPVAMPIWPSAAMEIQIQATNEMMNCSSEQSSDCFFNPNNWEKSTDHS 60
MENE F+NAG+ P M PS++ + + E S + F WEKST+ S
Sbjct: 1 MENELFMNAGVSHPPVM-TSPSSSSAMLKWVSMETQPVDPSLSRNLF-----WEKSTEQS 54
Query: 61 LQFDSALSSIVSSPAASNSNIS-----NESSVIRELIGKLGNIGNNSGAGEITPHSLAPY 115
+ FDSALSS+VSSP SNSN S E+ ++RELIGKLGNIG+ G
Sbjct: 55 I-FDSALSSLVSSPTPSNSNFSVGGVGGENVIMRELIGKLGNIGDIYGI----------- 102
Query: 116 INNNSNNNNGSSSTNASCYTTPLNSPPKLNLPMSLGNSMPLNSSVAEFSADPGFAERAAR 175
++S SCY TP++SPP ++ M + P+ AE S DPGFAERAAR
Sbjct: 103 ----------TASNGNSCYATPMSSPPPGSM-METKTTTPM----AELSGDPGFAERAAR 147
Query: 176 FSRFGSRSFNGRSTGQFVPNHNPDQFGLSRSNNNPNPMTANEKLPRVSSSPSLKVLGSQA 235
FS FGSRSFN R+ F N+ P P+T NEK+PRVSSSP K L S
Sbjct: 148 FSCFGSRSFNSRTNSPFPINNEP-------------PITTNEKMPRVSSSPVFKPLASHV 194
Query: 236 QATGNKSPQDRSELANSQEESSVSEQVPNDFNSRKRKAVSKGKGKETAASPSVNNTTKVA 295
A + EL SRKRK SK SPS +++K
Sbjct: 195 PAG-----ESSGEL------------------SRKRKTKSKQN------SPSAVSSSK-- 223
Query: 296 EANASESSKNKRCKPNEGKANGNGAVKAEDEGDDKQAKANNAKPPEPPKDYIHVRARRGQ 355
E E S KRCK K+E+ GD K +P KDYIHVRARRGQ
Sbjct: 224 EIEEKEDSDPKRCK------------KSEENGD-------KTKSIDPYKDYIHVRARRGQ 264
Query: 356 ATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMK 415
ATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMK
Sbjct: 265 ATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMK 324
Query: 416 LASVNTRLELNVDALMSKDIYQPNKPLPH--SIFQIDSSASAFFSHQPQQNPALHGNISN 473
L+SVNTRL+ N+DAL+SKDI+ + L H + Q+DSSA +N L+ +IS+
Sbjct: 325 LSSVNTRLDFNMDALLSKDIFPSSNNLMHHQQVLQLDSSAETLLGDHHNKNLQLNPDISS 384
Query: 474 GTMTQCPVDPLDNALCRNLSMQLPQLEQFTETIPQFQNFGEDDLQSIVQMGFGQNPNSET 533
+ ++PL+ + R+ LP L FT++I Q+ F DDL SI+ MGF QN
Sbjct: 385 NNV----INPLETSETRSFISHLPTLAHFTDSISQYSTFSGDDLHSIIHMGFAQN----- 435
Query: 534 SLQSQSFHGSNQAP-HMKAEL 553
LQ + SNQ P HMKAEL
Sbjct: 436 RLQELNQGSSNQVPSHMKAEL 456
>gi|297833524|ref|XP_002884644.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297330484|gb|EFH60903.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 456
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 265/564 (46%), Positives = 317/564 (56%), Gaps = 119/564 (21%)
Query: 1 MENEFFLNAGIPAPVAMPIWPSAA------MEIQIQATNEMMNCSSEQSSDCFFNPNNWE 54
MENE F+NAG + + PS++ + ++ Q + + C+ F WE
Sbjct: 1 MENELFMNAGASSHTPVMTSPSSSPAMLNWVSMETQPVDPSLGCN-------LF----WE 49
Query: 55 KSTDHSLQFDSALSSIVSSPAASNSNISN-ESSVIRELIGKLGNIGNNSGAGEITPHSLA 113
KST+ S+ F SALSS+VSSP SNSN S E+ VIRELIG+L NIG+ G TP S
Sbjct: 50 KSTEQSI-FHSALSSLVSSPTPSNSNFSGGENVVIRELIGRLSNIGDIYG----TPAS-- 102
Query: 114 PYINNNSNNNNGSSSTNASCYTTPLNSPPKLNLPMSLGNSMPLNSSVAEFSADPGFAERA 173
NG+ S SCY TP++SP + M +MP + EFS DPGFAERA
Sbjct: 103 ----------NGNVS--GSCYATPMSSPTPGRM-MVTKTTMP----ITEFSGDPGFAERA 145
Query: 174 ARFSRFGSRSFNGRSTGQFVPNHNPDQFGLSRSNNNPNPMTANEKLPRVSSSPSLKVLGS 233
ARFS FGSRSFNGR+ F NN P+ NEK+PR+SSSP LK L S
Sbjct: 146 ARFSCFGSRSFNGRTNSPF-------------PINNEQPVATNEKMPRISSSPVLKPLVS 192
Query: 234 QAQATGNKSPQDRSELANSQEESSVSEQVPNDFNSRKRKAVSKGKGKETAASPSVNNTTK 293
A G S + SRKRKA SK T SPS
Sbjct: 193 HVPA-GESSGE----------------------YSRKRKAKSKQNSPSTV-SPS------ 222
Query: 294 VAEANASESSKNKRCKPNEGKANGNGAVKAEDEGDDKQAKANNAKPPEPPKDYIHVRARR 353
E E S KRCK K+ED GD K +P KDYIHVRARR
Sbjct: 223 -KEIEEKEDSDPKRCK------------KSEDNGD-------KTKSIDPYKDYIHVRARR 262
Query: 354 GQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLS 413
GQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLS
Sbjct: 263 GQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLS 322
Query: 414 MKLASVNTRLELNVDALMSKDIYQPNKPLPH--SIFQIDSSASAFFSHQPQQNPALHGNI 471
MKL+SVNTRL+ N+DAL+SKDI+ + L H + Q+DSSA N L+ +I
Sbjct: 323 MKLSSVNTRLDFNMDALLSKDIFPSSNNLMHHQHVLQLDSSAETLLGDHHNNNLRLNPDI 382
Query: 472 SNGTMTQCPVDPLDNALCRNLSMQLPQLEQFTETIPQFQNFGEDDLQSIVQMGFGQNPNS 531
S + ++P + + R+ LP L FT++I Q+ F EDDL SI+QMGF QN
Sbjct: 383 SCNNI----INPSETSETRSFISHLPTLAHFTDSISQYSTFSEDDLTSIIQMGFAQNRLH 438
Query: 532 ETSLQSQSFHGSN-QAP-HMKAEL 553
E + HGS+ Q P HMKAEL
Sbjct: 439 ELN------HGSSKQVPSHMKAEL 456
>gi|20127064|gb|AAM10951.1|AF488595_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 450
Score = 383 bits (984), Expect = e-103, Method: Compositional matrix adjust.
Identities = 256/555 (46%), Positives = 312/555 (56%), Gaps = 113/555 (20%)
Query: 7 LNAGIPAPVAMPIWPSAAMEIQIQATNEMMNCSSEQSSDCFFNPNNWEKSTDHSLQFDSA 66
+NAG+ P M PS++ + + E S + F WEKST+ S+ FDSA
Sbjct: 1 MNAGVSHPPVM-TSPSSSSAMLKWVSMETQPVDPSLSRNLF-----WEKSTEQSI-FDSA 53
Query: 67 LSSIVSSPAASNSNIS-----NESSVIRELIGKLGNIGNNSGAGEITPHSLAPYINNNSN 121
LSS+VSSP SNSN S E+ ++RELIGKLGNIG+ G
Sbjct: 54 LSSLVSSPTPSNSNFSVGGVGGENVIMRELIGKLGNIGDIYGI----------------- 96
Query: 122 NNNGSSSTNASCYTTPLNSPPKLNLPMSLGNSMPLNSSVAEFSADPGFAERAARFSRFGS 181
++S SCY TP++SPP ++ M + P+ AE S DPGFAERAARFS FGS
Sbjct: 97 ----TASNGNSCYATPMSSPPPGSM-METKTTTPM----AELSGDPGFAERAARFSCFGS 147
Query: 182 RSFNGRSTGQFVPNHNPDQFGLSRSNNNPNPMTANEKLPRVSSSPSLKVLGSQAQATGNK 241
RSFN R+ F N+ P P+T NEK+PRVSSSP K L S A
Sbjct: 148 RSFNSRTNSPFPINNEP-------------PITTNEKMPRVSSSPVFKPLASHVPAG--- 191
Query: 242 SPQDRSELANSQEESSVSEQVPNDFNSRKRKAVSKGKGKETAASPSVNNTTKVAEANASE 301
+ EL SRKRK SK SPS +++K E E
Sbjct: 192 --ESSGEL------------------SRKRKTKSKQN------SPSAVSSSK--EIEEKE 223
Query: 302 SSKNKRCKPNEGKANGNGAVKAEDEGDDKQAKANNAKPPEPPKDYIHVRARRGQATDSHS 361
S KRCK K+E+ GD K +P KDYIHVRARRGQATDSHS
Sbjct: 224 DSDPKRCK------------KSEENGD-------KTKSIDPYKDYIHVRARRGQATDSHS 264
Query: 362 LAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMKLASVNT 421
LAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMKL+SVNT
Sbjct: 265 LAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMKLSSVNT 324
Query: 422 RLELNVDALMSKDIYQPNKPLPH--SIFQIDSSASAFFSHQPQQNPALHGNISNGTMTQC 479
RL+ N+DAL+SKDI+ + L H + Q+DSSA +N L+ +IS+ +
Sbjct: 325 RLDFNMDALLSKDIFPSSNNLMHHQQVLQLDSSAETLLGDHHNKNLQLNPDISSNNV--- 381
Query: 480 PVDPLDNALCRNLSMQLPQLEQFTETIPQFQNFGEDDLQSIVQMGFGQNPNSETSLQSQS 539
++PL+ + R+ LP L FT++I Q+ F EDDL SI+ MGF QN LQ +
Sbjct: 382 -INPLETSETRSFISHLPTLAHFTDSISQYSTFSEDDLHSIIHMGFAQN-----RLQELN 435
Query: 540 FHGSNQAP-HMKAEL 553
SNQ P HMKAEL
Sbjct: 436 QGSSNQVPSHMKAEL 450
>gi|449459842|ref|XP_004147655.1| PREDICTED: transcription factor bHLH78-like [Cucumis sativus]
gi|449525371|ref|XP_004169691.1| PREDICTED: transcription factor bHLH78-like [Cucumis sativus]
Length = 546
Score = 379 bits (973), Expect = e-102, Method: Compositional matrix adjust.
Identities = 259/583 (44%), Positives = 330/583 (56%), Gaps = 105/583 (18%)
Query: 1 MENEFFLNAGIPAPVAMPIWPSAAMEIQIQATNEMMNCSSEQSSDCFFNPNNWEKSTDHS 60
ME EFF+N G + M I P NE+ SS NPN WE S DHS
Sbjct: 1 MEKEFFMNDGGCSFYGMEIQP-----------NEL------NSSGGLLNPN-WENSMDHS 42
Query: 61 LQFDSALSSIVSSPAASNSNI--------SNESSVIRELIGKLGNIGNNSGAGEITPHSL 112
F+S LSSIVSSPA NS+I ++ ++RELIG+LG+I N +GEI+PHS
Sbjct: 43 DLFESTLSSIVSSPA--NSHIIGGGGGGGGGDNLMMRELIGRLGSICN---SGEISPHS- 96
Query: 113 APYINNNSNNNNGSSSTNASCYTTPLNSPPKLNLPMSL-----GNSMPLNSSVAEFSADP 167
YI +NN STN SCY TPLNSPPKLNL + GN +P + ++A FS DP
Sbjct: 97 --YIGGTNNN-----STNTSCYNTPLNSPPKLNLSSIMESQIRGNLIPHHQNLAPFSTDP 149
Query: 168 GFAERAARFSRFGSRSFNGRSTGQFVPNHNPDQFGLSRSNNNPNPMTANEKLPRVSSSPS 227
GFAERAARFS FG+R+ G + GQ N + S + + KL RVSS+ S
Sbjct: 150 GFAERAARFSCFGNRNLGGLN-GQLGSNETQELSNRSMAGAG----VESGKLSRVSSNKS 204
Query: 228 LKVLG----SQAQATGNKSPQDRSE---------------------LANSQEESSVSEQV 262
+ G G++SP + +S+E SSVSEQ
Sbjct: 205 FNIGGVGSPQMVVQEGDQSPVQKGNSMPIPNKKVSNRFSRSSTPENAGDSREGSSVSEQN 264
Query: 263 P---------NDFNSRKRKAVSKGKGKETAASPSVNNTTKVAEANASESSKNKRCKPNEG 313
P + N+RKRK+V G+ K+ A+ V N E N K+ KP+E
Sbjct: 265 PIGESGLKGKAETNTRKRKSVQTGQAKDVKAA--VEN----HEPNG------KKIKPDEV 312
Query: 314 KA----NGNGAVKAEDEGDDKQAKANNA-KPPEPPKDYIHVRARRGQATDSHSLAERVRR 368
G +A+ GD Q + N++ KPPEPPKDYIHVRARRGQATDSHSLAERVRR
Sbjct: 313 TKKEIDGAKGKAEAKSSGDANQKQNNDSSKPPEPPKDYIHVRARRGQATDSHSLAERVRR 372
Query: 369 EKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMKLASVNTRLELNVD 428
EKIS+RMK LQDLVPGCNKVTGKA+MLDEIINYVQSLQRQVEFLSMKLA+VN R++ N++
Sbjct: 373 EKISKRMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRMDFNME 432
Query: 429 ALMSKDIYQPNKPLPHSIFQIDSSASAF-FSHQPQQNPALHGNISNGTMTQCPVDPLDNA 487
L+ KDI++ H+++ +DSS F + +Q LH I NGT Q V ++
Sbjct: 433 TLVPKDIFKGPGSSSHTVYPMDSSVPQFAYDYQSMHVTPLHSGIPNGTEKQFSVASANDV 492
Query: 488 LCRNLSMQLPQLEQFTETI--PQFQNFGEDDLQSIVQMGFGQN 528
+ RNLS Q+ + E + Q F ED+L ++VQMG+GQN
Sbjct: 493 MQRNLSGQM--TNGYNEVVNGIQISKFWEDELHTVVQMGYGQN 533
>gi|449466372|ref|XP_004150900.1| PREDICTED: transcription factor bHLH62-like [Cucumis sativus]
Length = 412
Score = 378 bits (971), Expect = e-102, Method: Compositional matrix adjust.
Identities = 261/492 (53%), Positives = 307/492 (62%), Gaps = 88/492 (17%)
Query: 70 IVSSPAASNSNISNESSVIRELIGKLGNIGNNSGAGEITPHSLAPYINNNSNNNNGSSST 129
+VSSPAASNSNI+NES IRELIGKLG G E L S+ST
Sbjct: 1 MVSSPAASNSNITNESFAIRELIGKLG------GNSERRILEL-------------SNST 41
Query: 130 NASCYTTPLNSPPKLNLPMSLGNSMPLNSSVAEFSADPGFAERAARFSRFGSRSFNGRST 189
A+ LP P +SSVAEFS+DPGFAERAARFS FGSRSFNGR
Sbjct: 42 AAAA------------LP-------PSSSSVAEFSSDPGFAERAARFSCFGSRSFNGRQL 82
Query: 190 GQFVPNHNPDQFGLSRSNNNPNPMTANEKLPRVSSSPSLKVLGSQAQATGNKSPQDRSEL 249
++FG RS+ + NEKL RVSSSPSLK LGS+ Q+
Sbjct: 83 T--------NEFGNYRSHLS----IGNEKLSRVSSSPSLKALGSEMNL------QEHKNN 124
Query: 250 ANSQE-ESSVSEQVPNDFNSRKRKAVSKGKGKE--TAASPSVNNTTKVAEANASESSKNK 306
++SQE ESS+S Q N RKRKA++K K KE A+P + K+ E+ K +
Sbjct: 125 SSSQEDESSLSNQDKTITNPRKRKAITKAKLKEPVVEATPEKESPKKLKTVERKENVKTE 184
Query: 307 R-CKPNEGKANGNGAVKAEDEGDDKQAKANNAKPPEPPKDYIHVRARRGQATDSHSLAER 365
K N+ E+ +++Q KAN +KPPE PKDYIHVRARRGQATDSHSLAER
Sbjct: 185 EDLKKND-----------ENSAEERQTKAN-SKPPEAPKDYIHVRARRGQATDSHSLAER 232
Query: 366 VRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMKLASVN-TRLE 424
VRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQ QVEFLSMKLASVN TR++
Sbjct: 233 VRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQHQVEFLSMKLASVNTTRVD 292
Query: 425 LNVDALM-SKDIYQPNKPLPH-SIFQIDSSASAFFSHQPQQNPALHGNISNGTMTQCPVD 482
NVD+L+ SK +YQ L H I IDSS S+F+ HQ N S T + C VD
Sbjct: 293 FNVDSLISSKQMYQSGTSLTHPQISPIDSSTSSFYGHQ---------NSSLPTTSHCSVD 343
Query: 483 PLDNALCRNLSMQLPQLEQFTETIPQFQNFGEDDLQSIVQMGFGQNPNSETSLQSQSFH- 541
P+D+ LC+NL +QLP L F + Q+ NFGED+LQSIVQMGF QN E SLQS +F+
Sbjct: 344 PIDSVLCQNLPIQLPPLNSFLQNPSQYPNFGEDELQSIVQMGFVQNQTQEISLQSHNFNL 403
Query: 542 GSNQAPHMKAEL 553
GS+Q MK EL
Sbjct: 404 GSDQ---MKIEL 412
>gi|15239013|ref|NP_199667.1| transcription factor bHLH78 [Arabidopsis thaliana]
gi|75309142|sp|Q9FJL4.1|BH078_ARATH RecName: Full=Transcription factor bHLH78; AltName: Full=Basic
helix-loop-helix protein 78; Short=AtbHLH78; Short=bHLH
78; AltName: Full=Transcription factor EN 86; AltName:
Full=bHLH transcription factor bHLH078
gi|10177346|dbj|BAB10689.1| unnamed protein product [Arabidopsis thaliana]
gi|27754625|gb|AAO22758.1| unknown protein [Arabidopsis thaliana]
gi|28973465|gb|AAO64057.1| unknown protein [Arabidopsis thaliana]
gi|332008305|gb|AED95688.1| transcription factor bHLH78 [Arabidopsis thaliana]
Length = 498
Score = 345 bits (885), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 278/586 (47%), Positives = 327/586 (55%), Gaps = 121/586 (20%)
Query: 1 MENEFFLNAGIPAPVAMPIWPSAAMEIQIQATNEMMNCSSEQSSDCFFNPNN-------W 53
M+NE F+N P P M + E Q +++ MM + +PN W
Sbjct: 1 MDNELFMNTEFPPPPEM----ATHFEHQQSSSSAMM------LNWALMDPNPHQDSSFLW 50
Query: 54 EKSTDHSLQ---FDSALSSIVSSPAASNSNISN---ESSVIRELIGKLGNIGNNSGAG-E 106
EKST+ Q FDSALSS+VSSP SNSN S + +IRELIGKLGNIGNN+ E
Sbjct: 51 EKSTEQQQQQSIFDSALSSLVSSPTPSNSNFSGGGGDGFLIRELIGKLGNIGNNNNNSGE 110
Query: 107 I--TPHSLAPYINNNSNNNNGSSSTNASCYTTPLNSPPKLNLP---MSLGNSMPLNSSVA 161
I TP S + ASCY TP++SPP M + + PL
Sbjct: 111 IYGTPMSRS-----------------ASCYATPMSSPPPPTNSNSQMMMNRTTPL----T 149
Query: 162 EFSADPGFAERAARFSRFGSRSFNGRSTGQFVPNHNPDQFGLSRSNNNPNPMTANEKLPR 221
EFSADPGFAERAARFS FGSRSFNGR T +P NN N + + KL R
Sbjct: 150 EFSADPGFAERAARFSCFGSRSFNGR-TNTNLP-----------INNGNNMVNNSGKLTR 197
Query: 222 VSSSPSLKVLGSQAQATGNKSPQDRSELANSQEESSVSEQVPNDFNSRKRKAVSKGKGKE 281
VSS+P+LK L S E P SRKRK+V KGK KE
Sbjct: 198 VSSTPALKALVS-------------------------PEVTPGGEFSRKRKSVPKGKSKE 232
Query: 282 ---TAASPSVNNTTKVAEANASESSKNKRCKPNEGKANGNGAVKAEDEGDDKQAKANNAK 338
+ ASPS + +K AE N + +K + GK E+EG+ + K+NN K
Sbjct: 233 NPISTASPSPS-FSKTAEKNGGKGG-SKSSEEKGGKRRREEEDDEEEEGEGEGNKSNNTK 290
Query: 339 PPEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEI 398
PPEPPKDYIHVRARRGQATDSHSLAERVRREKI ERMKLLQDLVPGCNKVTGKALMLDEI
Sbjct: 291 PPEPPKDYIHVRARRGQATDSHSLAERVRREKIGERMKLLQDLVPGCNKVTGKALMLDEI 350
Query: 399 INYVQSLQRQVEFLSMKLASVN-TRLELNVDALMSKDIYQP--NKPLPHSIFQIDSSASA 455
INYVQSLQRQVEFLSMKL+SVN TRL+ NVDAL+SKD+ P N L Q SS
Sbjct: 351 INYVQSLQRQVEFLSMKLSSVNDTRLDFNVDALVSKDVMIPSSNNRLHEEGLQSKSS--- 407
Query: 456 FFSHQPQQ-------NPALHGNI-SNGTMTQCPVDPLDNALCRNLSMQLPQLEQFTETIP 507
SH QQ N L NI SN M Q P++ L+ + LP L QFT++I
Sbjct: 408 --SHHHQQQLNIYNNNSQLLPNISSNNMMLQSPMNSLETSTLARSFTHLPTLTQFTDSIS 465
Query: 508 QFQNFGEDDLQSIVQMGFGQNPNSETSLQSQSFHGSNQAPHMKAEL 553
Q+Q F E+DLQSIV MG +NPN N++ HMK EL
Sbjct: 466 QYQMFSEEDLQSIVGMGVAENPN-------------NESQHMKIEL 498
>gi|20127085|gb|AAM10957.1|AF488610_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 498
Score = 345 bits (884), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 278/586 (47%), Positives = 326/586 (55%), Gaps = 121/586 (20%)
Query: 1 MENEFFLNAGIPAPVAMPIWPSAAMEIQIQATNEMMNCSSEQSSDCFFNPNN-------W 53
M+NE F+N P P M + E Q +++ MM + +PN W
Sbjct: 1 MDNELFMNTEFPPPPEM----ATHFEHQQSSSSAMM------LNWALMDPNPHQDSSFLW 50
Query: 54 EKSTDHSLQ---FDSALSSIVSSPAASNSNISN---ESSVIRELIGKLGNIGNNSGAG-E 106
EKST+ Q FDSALSS+VSSP SNSN S + +IRELIGKLGNIGNN+ E
Sbjct: 51 EKSTEQQQQQSIFDSALSSLVSSPTPSNSNFSGGGGDGFLIRELIGKLGNIGNNNNNSGE 110
Query: 107 I--TPHSLAPYINNNSNNNNGSSSTNASCYTTPLNSPPKLNLP---MSLGNSMPLNSSVA 161
I TP S + ASCY TP++SPP M + + PL
Sbjct: 111 IYGTPMSRS-----------------ASCYATPMSSPPPPTNSNSQMMMNRTTPL----T 149
Query: 162 EFSADPGFAERAARFSRFGSRSFNGRSTGQFVPNHNPDQFGLSRSNNNPNPMTANEKLPR 221
EFSADPGFAERAARFS FGSRSFNGR T +P NN N + + KL R
Sbjct: 150 EFSADPGFAERAARFSCFGSRSFNGR-TNTNLP-----------INNGNNMVNNSGKLTR 197
Query: 222 VSSSPSLKVLGSQAQATGNKSPQDRSELANSQEESSVSEQVPNDFNSRKRKAVSKGKGKE 281
VSS+P+LK L S E P SRKRK+V KGK KE
Sbjct: 198 VSSTPALKALVS-------------------------PEVTPGGEFSRKRKSVPKGKSKE 232
Query: 282 ---TAASPSVNNTTKVAEANASESSKNKRCKPNEGKANGNGAVKAEDEGDDKQAKANNAK 338
+ ASPS + +K AE N + +K + GK E+EG + K+NN K
Sbjct: 233 NPISTASPSPS-FSKTAEKNGGKGG-SKSSEEKGGKRRREEEDDEEEEGGGEGNKSNNTK 290
Query: 339 PPEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEI 398
PPEPPKDYIHVRARRGQATDSHSLAERVRREKI ERMKLLQDLVPGCNKVTGKALMLDEI
Sbjct: 291 PPEPPKDYIHVRARRGQATDSHSLAERVRREKIGERMKLLQDLVPGCNKVTGKALMLDEI 350
Query: 399 INYVQSLQRQVEFLSMKLASVN-TRLELNVDALMSKDIYQP--NKPLPHSIFQIDSSASA 455
INYVQSLQRQVEFLSMKL+SVN TRL+ NVDAL+SKD+ P N L Q SS
Sbjct: 351 INYVQSLQRQVEFLSMKLSSVNDTRLDFNVDALVSKDVMIPSSNNRLHEEGLQSKSS--- 407
Query: 456 FFSHQPQQ-------NPALHGNI-SNGTMTQCPVDPLDNALCRNLSMQLPQLEQFTETIP 507
SH QQ N L NI SN M Q P++ L+ + LP L QFT++I
Sbjct: 408 --SHHHQQQLNIYNNNSQLLPNISSNNMMLQSPMNSLETSTLARSFTHLPTLTQFTDSIS 465
Query: 508 QFQNFGEDDLQSIVQMGFGQNPNSETSLQSQSFHGSNQAPHMKAEL 553
Q+Q F E+DLQSIV MG +NPN N++ HMK EL
Sbjct: 466 QYQMFSEEDLQSIVGMGVAENPN-------------NESQHMKIEL 498
>gi|148906813|gb|ABR16552.1| unknown [Picea sitchensis]
Length = 605
Score = 341 bits (875), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 235/580 (40%), Positives = 317/580 (54%), Gaps = 112/580 (19%)
Query: 52 NWEKSTDHSLQFDSALSSIVSSPAASNSNISNESSVIRELIGKLG-NIGNNSGAGEITPH 110
NWE + S+ F S+LS +VS P+ +++ ++S IRELIG+LG NI + SG T
Sbjct: 60 NWEPLIEQSIPFQSSLSPMVS-PSPPATSLPSDSIAIRELIGRLGGNICSVSGPLGSTMD 118
Query: 111 SLAPYINNNSNNNNGSSSTNASCYTTPLNSPPKLNLPM-----SLGNSMPLNS---SVAE 162
++ N PLNS P LNL + +L P ++ ++A+
Sbjct: 119 TV----------------LNMGTAWNPLNSSPNLNLAVDPSKGALSIQGPKHTPPHNLAQ 162
Query: 163 FSADPGFAERAARFSRFGSRSF------------------------------NGRSTGQF 192
FS+DPGFAERAARFS FG+R++ + +S
Sbjct: 163 FSSDPGFAERAARFSCFGNRNYPELATPFNFPEGEPSYRSAPVDNSKIPRVQSNQSLKAG 222
Query: 193 VPNHNPDQFGLSRSNNNPNPMTANEKLPRV----------SSSP-SLKVLGSQAQATGNK 241
+P + P+ SN + P +E PR SS+P S + + +GN+
Sbjct: 223 LPINLPNMAETKESNASETPHEGSEADPRFTDRKISRISRSSTPVSTDDMKQRLATSGNE 282
Query: 242 SPQDRSELANSQEESSVSEQVP---------NDFNSRKRKAVSKGKGKET--AASPSVNN 290
S D +E + +EESS S+Q+ N+ N RKR+ +SK K K+T A + S
Sbjct: 283 S--DEAEFSTGREESSCSDQIAGREPGSKTLNEVNGRKRRVLSKAKAKDTPSAVASSGGR 340
Query: 291 TTKVAEANASESSKNKRCKPNEGKANGNGAVKAEDEGDDKQAKANNA------------- 337
TK EA+ S + + K GA +E DD ++KA +
Sbjct: 341 ETKSLEADESPTKRYK------------GAEVGSNEKDDAKSKAEQSTILSTGESSPKQT 388
Query: 338 ----KPPEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKAL 393
K PEPPKDYIHVRARRGQATDSHSLAERVRREKISERMK LQDLVPGC+KVTGKA+
Sbjct: 389 KDIVKTPEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAV 448
Query: 394 MLDEIINYVQSLQRQVEFLSMKLASVNTRLELNVDALMSKDIYQPNKPLPHSIFQIDSSA 453
MLDEIINYVQSLQRQVEFLSMKLA+VN RL+ N+D L++KD+ Q + P +F D +A
Sbjct: 449 MLDEIINYVQSLQRQVEFLSMKLATVNPRLDFNMDGLIAKDMLQSHGSSPRMLFSTDPTA 508
Query: 454 SAFFSHQPQQNPALHGNISNGTMTQCPVDPLDNALCRNLSMQLPQLEQFTETIPQFQNFG 513
+ HQPQQ P G ++ GT P++ AL R ++ Q P ++ + ++IPQ N
Sbjct: 509 AFPQLHQPQQGPVQVG-VTCGTEGHRMGHPVEGALRRTMNAQPPCIDGYGDSIPQVANVW 567
Query: 514 EDDLQSIVQMGFGQNPNSETSLQSQSFHGSNQAPHMKAEL 553
++DLQS+VQMGFGQ N ++ SQ FHGS HMK EL
Sbjct: 568 DEDLQSVVQMGFGQ--NRQSPFTSQGFHGSVPTSHMKIEL 605
>gi|297792043|ref|XP_002863906.1| hypothetical protein ARALYDRAFT_494918 [Arabidopsis lyrata subsp.
lyrata]
gi|297309741|gb|EFH40165.1| hypothetical protein ARALYDRAFT_494918 [Arabidopsis lyrata subsp.
lyrata]
Length = 498
Score = 338 bits (867), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 279/586 (47%), Positives = 329/586 (56%), Gaps = 121/586 (20%)
Query: 1 MENEFFLNAGIPAPVAM------PIWPSAAMEIQIQATNEMMNCSSEQSSDCFFNPNNWE 54
M+NE F+N P P M P S+AM + +M+ + Q S WE
Sbjct: 1 MDNELFMNTEFPPPPEMATHFEPPPSSSSAMMLNW----ALMDPNPPQDSSFI-----WE 51
Query: 55 KSTDHSLQ---FDSALSSIVSSPAASNSNISN---ESSVIRELIGKLGNIGNNSGAG-EI 107
KST+ Q FDSALSS+VSSP SNSN S + +IRELIGKLGNIGNN+ EI
Sbjct: 52 KSTEQQQQQSIFDSALSSLVSSPTPSNSNFSGGGGDGFLIRELIGKLGNIGNNNNNSGEI 111
Query: 108 --TPHSLAPYINNNSNNNNGSSSTNASCYTTPLNSPPK---LNLPMSLGNSMPLNSSVAE 162
TP S +ASCY TP++SPP N M + + PL E
Sbjct: 112 YGTPMS-----------------RSASCYATPMSSPPPPTNTNSQMMMNRTTPL----TE 150
Query: 163 FSADPGFAERAARFSRFGSRSFNGRSTGQFVPNHNPDQFGLSRSNNNPNPMTANEKLPRV 222
FSADPGFAERA+RFS FGSRSFNGR T +P NN N + + KL RV
Sbjct: 151 FSADPGFAERASRFSCFGSRSFNGR-TNTNLP-----------INNGNNIVNNSGKLTRV 198
Query: 223 SSSPSLKVLGSQAQATGNKSPQDRSELANSQEESSVSEQVPNDFNSRKRKAVSKGKGKE- 281
SS+P+LK L S A G + P RKRK+V KGK KE
Sbjct: 199 SSTPALKALVSPEVAPGGEFP-------------------------RKRKSVPKGKSKEN 233
Query: 282 --TAASPSVNNTTKVAEANASESSKNKRCKPNEGKANGNGAVKAEDEGDDKQAKANNAKP 339
+ ASPS + +K AE K + +G G + EDE + + NN KP
Sbjct: 234 PISTASPSPS-FSKTAEKKEEWGGKGSKSSEEKG---GKRRREDEDEEEGEGEGNNNTKP 289
Query: 340 PEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEII 399
PEPPKDYIHVRARRGQATDSHSLAERVRREKI ERMKLLQDLVPGCNKVTGKALMLDEII
Sbjct: 290 PEPPKDYIHVRARRGQATDSHSLAERVRREKIGERMKLLQDLVPGCNKVTGKALMLDEII 349
Query: 400 NYVQSLQRQVEFLSMKLASVN-TRLELNVDALMSKDIYQP--NKPLPHSIFQIDSSASAF 456
NYVQSLQRQVEFLSMKL+SVN TRL+ NVDAL+SKD+ P N L Q SS+
Sbjct: 350 NYVQSLQRQVEFLSMKLSSVNDTRLDFNVDALVSKDVMIPSSNNRLHEEGLQSKSSSR-- 407
Query: 457 FSHQPQQ-------NPALHGNI-SNGTMTQCPVDPLD-NALCRNLSMQLPQLEQFTETIP 507
HQ QQ N L NI SN M Q P++ L+ + L R+ + LP L QFT++I
Sbjct: 408 -HHQQQQLNMYNSNNAQLLPNISSNNMMLQSPMNSLEASTLARSFT-HLPTLTQFTDSIS 465
Query: 508 QFQNFGEDDLQSIVQMGFGQNPNSETSLQSQSFHGSNQAPHMKAEL 553
Q+Q F E+DLQSIV MG NPN N++ HMK EL
Sbjct: 466 QYQMFSEEDLQSIVGMGVALNPN-------------NESQHMKIEL 498
>gi|115441817|ref|NP_001045188.1| Os01g0915600 [Oryza sativa Japonica Group]
gi|56784941|dbj|BAD82399.1| putative bHLH transcription factor [Oryza sativa Japonica Group]
gi|113534719|dbj|BAF07102.1| Os01g0915600 [Oryza sativa Japonica Group]
gi|215704868|dbj|BAG94896.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218189599|gb|EEC72026.1| hypothetical protein OsI_04910 [Oryza sativa Indica Group]
gi|323388943|gb|ADX60276.1| bHLH transcription factor [Oryza sativa Japonica Group]
Length = 481
Score = 317 bits (812), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 227/555 (40%), Positives = 286/555 (51%), Gaps = 137/555 (24%)
Query: 46 CFFNPNNWEKSTDHSL--QFDSALSSIVSSPAASNSNISNESSVIRELIGKLGNIGNNSG 103
CF N NW++S D + D ALSS+VSSPA+ N++G
Sbjct: 17 CFLN-LNWDQSMDAAAGGHLDPALSSMVSSPAS-----------------------NSTG 52
Query: 104 AGEITPHSLAPYINNNSNNNNGSSSTNASCYTTPLNSPPKLNLPMS-------------- 149
A H ++P + TPL+SPPKLNL M
Sbjct: 53 A----LHGISPQPHYGGG--------------TPLSSPPKLNLSMMGQFHHYAAPPQVGG 94
Query: 150 ----------LGNSMPLNSSVAEFSADPGFAERAARFSRFGSRSFNGRSTGQFVPNHNPD 199
L N MP+ + +F ADPGFAERAAR S F +R G P
Sbjct: 95 GGGGGGGLPILENLMPMG-HLDQFLADPGFAERAARLSGFDARGGGGGGGYG---GAGPA 150
Query: 200 QFGLSRSNNNPNPMTANEKLPRVSSSPSLKVLGSQAQATGNKSPQDRSELANSQEESSVS 259
QFGL P G+ + EL N+++ESSVS
Sbjct: 151 QFGL----------------------PDAGAAGASKEM----------ELGNTRDESSVS 178
Query: 260 EQVP----------NDFNSRKRKAVSKGKGKETAASPSVNNTTKVAEANASESSKNKRCK 309
+ P +D N+RKRKA KGKGK++ S S A E S KRCK
Sbjct: 179 DPAPGGAEIPPKGASDGNARKRKASGKGKGKDSPMSTSA----------AKEDSSGKRCK 228
Query: 310 PNE----GKANGNGAVKA-----EDEGDDKQAKANNAKPPEPPKDYIHVRARRGQATDSH 360
E +G KA E+ G KQ K +++KPPEPPKDYIHVRARRG+ATDSH
Sbjct: 229 STEESNAAAEENSGKGKAAQSNSENGGGKKQGKDSSSKPPEPPKDYIHVRARRGEATDSH 288
Query: 361 SLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMKLASVN 420
SLAERVRREKIS+RMKLLQDLVPGCNKV GKA+MLDEIINYVQSLQRQVEFLSMKLA+VN
Sbjct: 289 SLAERVRREKISQRMKLLQDLVPGCNKVVGKAVMLDEIINYVQSLQRQVEFLSMKLATVN 348
Query: 421 TRLEL-NVDALMSKDIYQPNKPLPHSIFQIDSSASAF-FSHQPQQNPALHGNISNGTMTQ 478
+L+ N+ L++KD++Q PL S F +++S + + +QPQQ L ++NG Q
Sbjct: 349 PQLDFNNLPNLLAKDMHQSCSPLQSSHFPLETSGAPLPYINQPQQGNPLGCGLTNGMDNQ 408
Query: 479 CPVDPLDNALCRNLSMQLPQLEQFTETIPQFQNFGEDDLQSIVQMGFGQNPNSETSLQSQ 538
+ PLD A CR + P L ++ Q F +DDLQS+VQM GQ + E + S
Sbjct: 409 GSMHPLDPAFCRPMGSHHPFLNGVSDAASQVGAFWQDDLQSVVQMDMGQ--SQEIATSSN 466
Query: 539 SFHGSNQAPHMKAEL 553
S++GS Q HMK EL
Sbjct: 467 SYNGSLQTVHMKMEL 481
>gi|222619751|gb|EEE55883.1| hypothetical protein OsJ_04533 [Oryza sativa Japonica Group]
Length = 483
Score = 293 bits (749), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 216/553 (39%), Positives = 282/553 (50%), Gaps = 131/553 (23%)
Query: 46 CFFNPNNWEKSTDHSL--QFDSALSSIVSSPAASNSNISNESSVIRELIGKLGNIGNNSG 103
CF N NW++S D + D ALSS+VSSPA+ N++G
Sbjct: 17 CFLN-LNWDQSMDAAAGGHLDPALSSMVSSPAS-----------------------NSTG 52
Query: 104 AGEITPHSLAPYINNNSNNNNGSSSTNASCYTTPLNSPPKLNLPMSLGNSMPLNSSVAEF 163
A H ++P + TPL+SPPKLNL S+ ++ +F
Sbjct: 53 A----LHGISPQPHYGGG--------------TPLSSPPKLNL--SMMGQFHHYAAPPQF 92
Query: 164 SADPGFAERAARFSRFGSRSFNGRSTGQFVPNHNPDQFGLSRSNNNPNPMTANEKLPRVS 223
ADPGFAERAAR S F +R G P QFGL
Sbjct: 93 LADPGFAERAARLSGFDARGGGGGGGYG---GAGPAQFGL-------------------- 129
Query: 224 SSPSLKVLGSQAQATGNKSPQDRSELANSQEESSVSEQVPNDFNSRKRKAVSKG------ 277
P G+ + EL N+++ESSVS+ P R+R+ ++G
Sbjct: 130 --PDAGAAGASKEM----------ELGNTRDESSVSDPAP-----RRRRDSAQGGFRRQC 172
Query: 278 ------KGKETAASPSVN----NTTKVAEANAS----------------ESSKNKRCKPN 311
+ + P V+ T ++ A A+ E S KRCK
Sbjct: 173 TEAEGLREGQRQGQPHVHLRRQGTRRIPLAMAAPHHSWTERFHLSSVLQEDSSGKRCKST 232
Query: 312 E----GKANGNGAVKA-----EDEGDDKQAKANNAKPPEPPKDYIHVRARRGQATDSHSL 362
E +G KA E+ G KQ K +++KPPEPPKDYIHVRARRG+ATDSHSL
Sbjct: 233 EESNAAAEENSGKGKAAQSNSENGGGKKQGKDSSSKPPEPPKDYIHVRARRGEATDSHSL 292
Query: 363 AERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMKLASVNTR 422
AERVRREKIS+RMKLLQDLVPGCNKV GKA+MLDEIINYVQSLQRQVEFLSMKLA+VN +
Sbjct: 293 AERVRREKISQRMKLLQDLVPGCNKVVGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPQ 352
Query: 423 LEL-NVDALMSKDIYQPNKPLPHSIFQIDSSASAF-FSHQPQQNPALHGNISNGTMTQCP 480
L+ N+ L++KD++Q PL S F +++S + + +QPQQ L ++NG Q
Sbjct: 353 LDFNNLPNLLAKDMHQSCSPLQSSHFPLETSGAPLPYINQPQQGNPLGCGLTNGMDNQGS 412
Query: 481 VDPLDNALCRNLSMQLPQLEQFTETIPQFQNFGEDDLQSIVQMGFGQNPNSETSLQSQSF 540
+ PLD A CR + P L ++ Q F +DDLQS+VQM GQ + E + S S+
Sbjct: 413 MHPLDPAFCRPMGSHHPFLNGVSDAASQVGAFWQDDLQSVVQMDMGQ--SQEIATSSNSY 470
Query: 541 HGSNQAPHMKAEL 553
+GS Q HMK EL
Sbjct: 471 NGSLQTVHMKMEL 483
>gi|242059665|ref|XP_002458978.1| hypothetical protein SORBIDRAFT_03g043690 [Sorghum bicolor]
gi|241930953|gb|EES04098.1| hypothetical protein SORBIDRAFT_03g043690 [Sorghum bicolor]
Length = 484
Score = 274 bits (701), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 199/458 (43%), Positives = 253/458 (55%), Gaps = 87/458 (18%)
Query: 136 TPLNSPPKLNLPMS---------------------LGNSMPLNSSVAEFSADPGFAERAA 174
TPL+SPPKLNL M L N MP+ + + +F ADPGFAERAA
Sbjct: 74 TPLSSPPKLNLSMMGQFHHYPPPQVGGAAPSGLPILENLMPM-AHLDQFLADPGFAERAA 132
Query: 175 RFSRFGSRSFNGRSTGQFVPNHNPDQFGLSRSNNNPNPMTANEKLPRVSSSPSLKVLGSQ 234
R S F R G P QFGL ++ P+ A ++L
Sbjct: 133 RLSGFDGRPGGSGYGGAV-----PGQFGLPDAD----PIDALKEL--------------- 168
Query: 235 AQATGNKSPQDRSELANSQEESSVSE----------QVPNDFNSRKRKAVSKGKGKETAA 284
EL N ++ESSVS+ + P+D N++KRKA KGKGK+
Sbjct: 169 -------------ELGNGRDESSVSDPASASAEMALKGPSDGNAKKRKASGKGKGKDGPG 215
Query: 285 SPSVNNTTKVAEANASESSKNKRCK-------PNEGKANGNGAVKAEDEGDDKQAKANNA 337
S + + K E S KRCK + G A + G KQ K + +
Sbjct: 216 STAAKDLAK-------EESGGKRCKSADESNGAEDNSTKGKAAQSNSENGGKKQGKDSTS 268
Query: 338 KPPEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDE 397
KPPEPPKDYIHVRARRG+ATDSHSLAERVRREKIS+RMKLLQDLVPGCNKV GKA+MLDE
Sbjct: 269 KPPEPPKDYIHVRARRGEATDSHSLAERVRREKISQRMKLLQDLVPGCNKVVGKAVMLDE 328
Query: 398 IINYVQSLQRQVEFLSMKLASVNTRLEL-NVDALMSKDIYQPNKPLPHSIFQIDSSASAF 456
IINYVQSLQRQVEFLSMKLA+VN +L+ N+ L+ KDI+Q PL +S F +++S +
Sbjct: 329 IINYVQSLQRQVEFLSMKLATVNPQLDFNNLPNLLPKDIHQSCGPLQNSHFPLETSGAPL 388
Query: 457 -FSHQPQQNPALHGNISNGTMTQCPVDPLDNALCRNLSMQLPQLEQFTETIPQFQNFGED 515
+ +QP Q L +++ G +Q + PLD A CR ++ Q P L ++ Q F +D
Sbjct: 389 PYLNQPHQGNPLGCSLT-GMDSQSSMHPLDPAFCRPMNSQHPFLNGVSDAASQVGTFWQD 447
Query: 516 DLQSIVQMGFGQNPNSETSLQSQSFHGSNQAPHMKAEL 553
DLQS+V M GQ+ S S++GS Q HMK EL
Sbjct: 448 DLQSVVHMDIGQS-QEIAPTSSNSYNGSLQTVHMKMEL 484
>gi|224065260|ref|XP_002301743.1| predicted protein [Populus trichocarpa]
gi|222843469|gb|EEE81016.1| predicted protein [Populus trichocarpa]
Length = 225
Score = 271 bits (692), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 139/231 (60%), Positives = 170/231 (73%), Gaps = 9/231 (3%)
Query: 324 EDEGDDKQAKANNAKPPEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVP 383
E+ G+ KQ K +N+ PPEPPKDYIHVRARRGQATDSHSLAERVRREKISERMK LQDLVP
Sbjct: 3 EENGNHKQKK-DNSNPPEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVP 61
Query: 384 GCNKVTGKALMLDEIINYVQSLQRQVEFLSMKLASVNTRLELNVDALMSKDIYQPNKPLP 443
GCNKVTGKA+MLDEIINYVQSLQRQVEFLSMK+A+VN ++E+N++ +SKDI+Q +P
Sbjct: 62 GCNKVTGKAVMLDEIINYVQSLQRQVEFLSMKMATVNPKMEINMETFLSKDIFQSRGSMP 121
Query: 444 HSIFQIDSSASAF-FSHQPQQNPALHGNISNGTMTQCPVDPLDNALCRNLSMQLPQLEQF 502
H ++ +DSS AF + +Q QQ AL +S +Q ++PL+ AL R+ SMQLP L+ F
Sbjct: 122 HGLYPLDSSTPAFPYGYQSQQGLALQDGMSRNAESQFSMNPLNAALRRSSSMQLPALDGF 181
Query: 503 TETIPQFQNFGEDDLQSIVQMGFGQNPNSETSLQSQSFHGSNQAPHMKAEL 553
+ Q +DDLQS+VQMG+GQN Q Q F GS MK EL
Sbjct: 182 GDASHQASAMWQDDLQSVVQMGYGQN-------QQQDFQGSVPPTQMKIEL 225
>gi|357126478|ref|XP_003564914.1| PREDICTED: transcription factor bHLH62-like [Brachypodium
distachyon]
Length = 475
Score = 267 bits (682), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 218/557 (39%), Positives = 272/557 (48%), Gaps = 149/557 (26%)
Query: 46 CFFNPNNWEKSTDH------SLQFDSALSSIVSSPAASNSNISNESSVIRELIGKLGNIG 99
CF N NW++S D D AL S+VSSPAASNS + ++
Sbjct: 19 CFLN-LNWDQSMDAPAHRGAGAHLDPALGSMVSSPAASNSTATEGLAL------------ 65
Query: 100 NNSGAGEITPHSLAPYINNNSNNNNGSSSTNASCYTTPLNSPPKLNLPM----------- 148
H ++P+ TP PPKL+L M
Sbjct: 66 ----------HGISPHYGG-----------------TP---PPKLDLSMMGQFHHHYPPP 95
Query: 149 -----------SLGNSMPLNSSVAEFSADPGFAERAARFSRFGSRSFNGRSTGQFVPNHN 197
+L N MP+ S + +F ADPGFAERAAR S FG
Sbjct: 96 QAGGGSGGGLPTLENLMPMGS-LDQFLADPGFAERAARLSGFGGPG-------------- 140
Query: 198 PDQFGLSRSNNNPNPMTANEKLPRVSSSPSLKVLGSQAQATGNKSPQDRSELANSQEESS 257
LP +LK L EL N+++ESS
Sbjct: 141 ----------------PGQFGLPDDGPIGALKEL----------------ELGNARDESS 168
Query: 258 VSEQVPN-------DFNSRKRKAVSKGKGKETAASPSVNNTTKVAEANASESSKNKRCK- 309
VS+ D N+RKRKA SKGKGK+++ S S + A E S KRCK
Sbjct: 169 VSDPASEMALKGAPDGNARKRKAGSKGKGKDSSMSTSAKDLL------AKEDSAAKRCKS 222
Query: 310 ------PNEGKANGNGA-VKAEDEGDDKQAK-ANNAKPPEPPKDYIHVRARRGQATDSHS 361
E A G A +E+ G KQ K A +K PEPPKDYIHVRARRG+ATDSHS
Sbjct: 223 MEESNGAEENCAKGKAAQSSSENGGGKKQGKDAGASKLPEPPKDYIHVRARRGEATDSHS 282
Query: 362 LAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMKLASVNT 421
LAERVRREKIS+RMKLLQDLVPGCNKV GKA+MLDEIINYVQSLQRQVEFLSMKLA+VN
Sbjct: 283 LAERVRREKISQRMKLLQDLVPGCNKVVGKAVMLDEIINYVQSLQRQVEFLSMKLATVNP 342
Query: 422 RLEL-NVDALMSKDIYQPNKPLPHSIFQIDSSASAF-FSHQPQQ--NPALHGNISNGTMT 477
+L+ N+ L++KD+ Q L S F +++S + + QP Q NP L +++G
Sbjct: 343 QLDFNNLPNLLAKDMQQSCGQLQSSHFPLEASGAPLPYMSQPHQGSNP-LDCGMTDGMDD 401
Query: 478 QCPV-DPLDNALCRNLSMQLPQLEQFTETIPQFQNFGEDDLQSIVQMGFGQNPNSETSLQ 536
Q + LD A CR + L ++ Q F + DLQS+VQM GQ + E +
Sbjct: 402 QGSMHHQLDPAFCRPMGSHHHFLNGVSDAASQVGAFWQ-DLQSVVQMDMGQ--SQEIATS 458
Query: 537 SQSFHGSNQAPHMKAEL 553
S S+ GS Q HMK EL
Sbjct: 459 SNSYDGSLQTVHMKMEL 475
>gi|326525931|dbj|BAJ93142.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 474
Score = 266 bits (679), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 198/467 (42%), Positives = 253/467 (54%), Gaps = 102/467 (21%)
Query: 136 TPLNSPPKLNLPM--------------------SLGNSMPLNSSVAEFSADPGFAERAAR 175
TPL SP KLNL M +L N MP++S + +F ADPGFA+RAAR
Sbjct: 61 TPLGSPTKLNLSMMGQYRHHAHQYPPPQVGGLPTLENLMPMDS-LDQFLADPGFAQRAAR 119
Query: 176 FSRFGSRSFNGRSTGQFVPNHNPDQFGLSRSNNNPNPMTANEKLPRVSSSPSLKVLGSQA 235
S F +R G QFGL + P+ A ++L
Sbjct: 120 LSGFDARGGYGA------------QFGLP----DDGPVGALKEL---------------- 147
Query: 236 QATGNKSPQDRSELANSQEESSVSE------------QVPNDFNSRKRKAV--SKGKGKE 281
EL +++++SSVS+ + +D N+RKRKA SKGKGK+
Sbjct: 148 ------------ELGSARDDSSVSDPASASAGAGMALKGASDGNARKRKAAGGSKGKGKD 195
Query: 282 TAASPSVNNTTKVAEANASESSKNKRCKP------NEGKANGNGAVKAEDEGDDKQAKAN 335
+ S TT + A E S +KRCK E G A + + G KQ K
Sbjct: 196 ASVS-----TTSAKDLLAKEDSASKRCKSMSMEDGEENSGKGKAAQSSSENGGKKQGKDG 250
Query: 336 NAKPPEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALML 395
+K PEPPKD+IHVRARRG+ATDSHSLAERVRREKIS+RMKLLQDLVPGCNKV GKA+ML
Sbjct: 251 ASKLPEPPKDFIHVRARRGEATDSHSLAERVRREKISQRMKLLQDLVPGCNKVVGKAVML 310
Query: 396 DEIINYVQSLQRQVEFLSMKLASVNTRLEL-NVDALMSKDIYQPNKPLPH---SIFQIDS 451
DEIINYVQSLQRQVEFLSMKLA+VN +L+ N+ L++KD+ Q + S F +++
Sbjct: 311 DEIINYVQSLQRQVEFLSMKLATVNPQLDFNNLPNLLAKDMQQQSCGQLQQGSSHFPLEA 370
Query: 452 SASAFFSHQPQQNPALHG-NISNGTM--TQCPVDPLDNALCRNL-SMQLPQLEQF-TETI 506
S +A N L G +S+G M Q + PLD A CR + S Q Q + F ++
Sbjct: 371 SGAALPYMGQGNNDHLGGCGMSDGGMGDDQGAMHPLDQAFCRPMGSQQQQQQQHFLSDAA 430
Query: 507 PQFQNFGEDDLQSIVQMGFGQNPNSETSLQSQSFHGSNQAPHMKAEL 553
Q F + DLQS+VQM GQ + E + S S+ GS Q HMK EL
Sbjct: 431 SQVGAFWQ-DLQSVVQMDMGQ--SQEIATSSNSYDGSLQTVHMKMEL 474
>gi|326495502|dbj|BAJ85847.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 474
Score = 265 bits (678), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 198/467 (42%), Positives = 252/467 (53%), Gaps = 102/467 (21%)
Query: 136 TPLNSPPKLNLPM--------------------SLGNSMPLNSSVAEFSADPGFAERAAR 175
TPL SP KLNL M +L N MP+ S + +F ADPGFA+RAAR
Sbjct: 61 TPLGSPTKLNLSMMGQYRHHAHQYPPPQVGGLPTLENLMPMGS-LDQFLADPGFAQRAAR 119
Query: 176 FSRFGSRSFNGRSTGQFVPNHNPDQFGLSRSNNNPNPMTANEKLPRVSSSPSLKVLGSQA 235
S F +R G QFGL + P+ A ++L
Sbjct: 120 LSGFDARGGYGA------------QFGLP----DDGPVGALKEL---------------- 147
Query: 236 QATGNKSPQDRSELANSQEESSVSE------------QVPNDFNSRKRKAV--SKGKGKE 281
EL +++++SSVS+ + +D N+RKRKA SKGKGK+
Sbjct: 148 ------------ELGSARDDSSVSDPASASAGAGMALKGASDGNARKRKAAGGSKGKGKD 195
Query: 282 TAASPSVNNTTKVAEANASESSKNKRCKP------NEGKANGNGAVKAEDEGDDKQAKAN 335
+ S TT + A E S +KRCK E G A + + G KQ K
Sbjct: 196 ASVS-----TTSAKDLLAKEDSASKRCKSMSMEDGEENSGKGKAAQSSSENGGKKQGKDG 250
Query: 336 NAKPPEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALML 395
+K PEPPKD+IHVRARRG+ATDSHSLAERVRREKIS+RMKLLQDLVPGCNKV GKA+ML
Sbjct: 251 ASKLPEPPKDFIHVRARRGEATDSHSLAERVRREKISQRMKLLQDLVPGCNKVVGKAVML 310
Query: 396 DEIINYVQSLQRQVEFLSMKLASVNTRLEL-NVDALMSKDIYQPNKPLPH---SIFQIDS 451
DEIINYVQSLQRQVEFLSMKLA+VN +L+ N+ L++KD+ Q + S F +++
Sbjct: 311 DEIINYVQSLQRQVEFLSMKLATVNPQLDFNNLPNLLAKDMQQQSCGQLQQGSSHFPLEA 370
Query: 452 SASAFFSHQPQQNPALHG-NISNGTM--TQCPVDPLDNALCRNL-SMQLPQLEQF-TETI 506
S +A N L G +S+G M Q + PLD A CR + S Q Q + F ++
Sbjct: 371 SGAALPYMGQGNNDHLGGCGMSDGGMGDDQGAMHPLDQAFCRPMGSQQQQQQQHFLSDAA 430
Query: 507 PQFQNFGEDDLQSIVQMGFGQNPNSETSLQSQSFHGSNQAPHMKAEL 553
Q F + DLQS+VQM GQ + E + S S+ GS Q HMK EL
Sbjct: 431 SQVGAFWQ-DLQSVVQMDMGQ--SQEIATSSNSYDGSLQTVHMKMEL 474
>gi|293333026|ref|NP_001168271.1| putative HLH DNA-binding domain superfamily protein isoform 1 [Zea
mays]
gi|194707870|gb|ACF88019.1| unknown [Zea mays]
gi|223947139|gb|ACN27653.1| unknown [Zea mays]
gi|414879034|tpg|DAA56165.1| TPA: putative HLH DNA-binding domain superfamily protein isoform 1
[Zea mays]
gi|414879035|tpg|DAA56166.1| TPA: putative HLH DNA-binding domain superfamily protein isoform 2
[Zea mays]
Length = 460
Score = 262 bits (669), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 192/434 (44%), Positives = 235/434 (54%), Gaps = 55/434 (12%)
Query: 136 TPLNSPPKLNLPMSLG--NSMPLNSSVAEFSADPGFAERAARFSRFGSRSFNGRSTGQFV 193
TPL+SP KLNL M +G + P + +F ADPGFA RAAR S F R G
Sbjct: 66 TPLSSPRKLNLSM-MGQFHHYPPMGHLDQFLADPGFAARAARLSGFDGRPGGSGYGGAV- 123
Query: 194 PNHNPDQFGLSRSNNNPNPMTANEKLPRVSSSPSLKVLGSQAQATGNKSPQDRSELANSQ 253
P QFGL P +G + EL N +
Sbjct: 124 ----PGQFGL----------------------PDAGPIGGALREL---------ELGNGR 148
Query: 254 EESSVSEQVPNDFNSRKRKAVSKGKGKETAASPSVNNTTKVAEANAS-ESSKNKRCKPNE 312
+ESSVS+ + KA S G K+ AS A+ E S KRCK E
Sbjct: 149 DESSVSDPA-SASAEMALKAPSDGNAKKRKASGKGKGKDGPGSTAATKEESSGKRCKSAE 207
Query: 313 ---GKANGNGAVKA-----EDEGDDKQAKANNAKPPEPPKDYIHVRARRGQATDSHSLAE 364
G +G KA D G KQ K +KPPEPPKDYIHVRARRG+ATDSHSLAE
Sbjct: 208 ESNGAEENSGKGKAAAQSNSDNGGKKQGKDGASKPPEPPKDYIHVRARRGEATDSHSLAE 267
Query: 365 RVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMKLASVNTRLE 424
RVRREKIS+RMKLLQDLVPGCNKV GKA+MLDEIINYVQSLQRQVEFLSMKLA+VN +L+
Sbjct: 268 RVRREKISQRMKLLQDLVPGCNKVVGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPQLD 327
Query: 425 L-NVDALMSKDIYQPNKPLPHSIFQIDSSASAFFSHQPQQNPALHGNISNGTM-TQCPVD 482
N+ L+ KD++Q PL +S F +++S A + Q NP + + NG +Q +
Sbjct: 328 FNNLPNLLPKDMHQSCGPLQNSHFPLETSG-APLPYLNQGNPLIGCGLPNGMDNSQSSMH 386
Query: 483 PLDNALCRNL-SMQLPQLEQFTETIPQFQNFGEDDLQSIVQMGFGQNPNSETSLQSQSFH 541
PLD A CR + S Q P L ++ + F +DDLQS+V M GQ E + S + +
Sbjct: 387 PLDPAFCRPMSSQQHPFLNGVSDAASKVGTFWQDDLQSVVHMDMGQQSQQEMAPTSSNSY 446
Query: 542 --GSNQAPHMKAEL 553
GS Q HMK EL
Sbjct: 447 NDGSLQTVHMKMEL 460
>gi|226530189|ref|NP_001145523.1| uncharacterized protein LOC100278938 [Zea mays]
gi|195657423|gb|ACG48179.1| hypothetical protein [Zea mays]
Length = 460
Score = 261 bits (668), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 192/434 (44%), Positives = 234/434 (53%), Gaps = 55/434 (12%)
Query: 136 TPLNSPPKLNLPMSLG--NSMPLNSSVAEFSADPGFAERAARFSRFGSRSFNGRSTGQFV 193
TPL+SP KLNL M +G + P + +F ADPGFA RAAR S F R G
Sbjct: 66 TPLSSPRKLNLSM-MGQFHHYPPMGHLDQFLADPGFAARAARLSGFDGRPGGSGYGGAV- 123
Query: 194 PNHNPDQFGLSRSNNNPNPMTANEKLPRVSSSPSLKVLGSQAQATGNKSPQDRSELANSQ 253
P QFGL P +G + EL N +
Sbjct: 124 ----PGQFGL----------------------PDAGPIGGALREL---------ELGNGR 148
Query: 254 EESSVSEQVPNDFNSRKRKAVSKGKGKETAASPSVNNTTKVAEANAS-ESSKNKRCKPNE 312
+ESSVS+ + KA S G K+ AS A+ E S KRCK E
Sbjct: 149 DESSVSDPA-SASAEMALKAPSDGNAKKRKASGKGKGKDGPGSTAATKEESSGKRCKSAE 207
Query: 313 ---GKANGNGAVKA-----EDEGDDKQAKANNAKPPEPPKDYIHVRARRGQATDSHSLAE 364
G +G KA D G KQ K +KPPEPPKDYIH RARRG+ATDSHSLAE
Sbjct: 208 ESNGAEENSGKGKAAAQSNSDNGGKKQGKDGASKPPEPPKDYIHFRARRGEATDSHSLAE 267
Query: 365 RVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMKLASVNTRLE 424
RVRREKIS+RMKLLQDLVPGCNKV GKA+MLDEIINYVQSLQRQVEFLSMKLA+VN +L+
Sbjct: 268 RVRREKISQRMKLLQDLVPGCNKVVGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPQLD 327
Query: 425 L-NVDALMSKDIYQPNKPLPHSIFQIDSSASAFFSHQPQQNPALHGNISNGTM-TQCPVD 482
N+ L+ KD++Q PL +S F +++S A + Q NP + + NG +Q +
Sbjct: 328 FNNLPNLLPKDMHQSCGPLQNSHFPLETSG-APLPYLNQGNPLIGCGLPNGMDNSQSSMH 386
Query: 483 PLDNALCRNL-SMQLPQLEQFTETIPQFQNFGEDDLQSIVQMGFGQNPNSETSLQSQSFH 541
PLD A CR + S Q P L ++ Q F +DDLQS+V M GQ E + S + +
Sbjct: 387 PLDPAFCRPMSSQQHPFLNGVSDAASQVGTFWQDDLQSVVHMDMGQQSQQEMAPTSSNSY 446
Query: 542 --GSNQAPHMKAEL 553
GS Q HMK EL
Sbjct: 447 NDGSLQTVHMKMEL 460
>gi|308080388|ref|NP_001183599.1| uncharacterized protein LOC100502193 [Zea mays]
gi|238013326|gb|ACR37698.1| unknown [Zea mays]
gi|413951548|gb|AFW84197.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 480
Score = 253 bits (645), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 215/546 (39%), Positives = 267/546 (48%), Gaps = 120/546 (21%)
Query: 46 CFFNPNNWEKSTDHSLQFDSALSSIVSSPAASNSNISNESSVIRELIGKLGNIGNNSGAG 105
CF N NW++S Q D ALSS+VSSP ASNS + + R L
Sbjct: 17 CFLN-LNWDQSMAAD-QLDPALSSMVSSP-ASNSTAAAAVTDGRAL-------------- 59
Query: 106 EITPHSLAPYINNNSNNNNGSSSTNASCYTTPLNSPPKLNL------------PMSLG-- 151
H ++P TPL+SPPKLNL P +G
Sbjct: 60 ----HGISPQQQYGG---------------TPLSSPPKLNLFHQTRPQFHHFPPPQVGGL 100
Query: 152 ----NSMPLNSSVAEFSADPGFAERAARFSRFGSRSFNGRSTGQFVPNHNPDQFGLSRSN 207
N MP+ + +F ADPGFAERAAR S F R G VP QFG+ +
Sbjct: 101 PILENLMPMG-HLDQFLADPGFAERAARLSGFDGRPGGSGYGGVGVPG----QFGIPDA- 154
Query: 208 NNPNPMTANEKLPRVSSSPSLKVLGSQAQATGNKSPQDRSELANSQEESSVSEQVPNDFN 267
P+ A ++L EL N ++ESSVS+
Sbjct: 155 ---GPIGALKEL----------------------------ELGNGRDESSVSDPASGSAE 183
Query: 268 SRKRKAVSKGKGKETAASPSVNNTTKVAEANAS---ESSKNKRCKPNE---GKANGNGAV 321
K S G K+ AS A A E S KRC+ + G + N
Sbjct: 184 MALNKGPSDGNAKKRKASGKGKGKDGPGSAAAGAAKEESSGKRCRSADESSGAEDNNPTT 243
Query: 322 KAE--------DEGDDKQAKANNAKPP-EPPKDYIHVRARRGQATDSHSLAERVRREKIS 372
K + G +Q K + KPP E PKDYIHVRARRG+ATDSHSLAERVRREKIS
Sbjct: 244 KGKAAQSSSENGGGRKQQGKESATKPPAEAPKDYIHVRARRGEATDSHSLAERVRREKIS 303
Query: 373 ERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMKLASVNTRLELNV--DAL 430
+RMKLLQDLVPGCNKV GKA+MLDEIINYVQSLQRQVEFLSMKLA+VN +L+ N + L
Sbjct: 304 QRMKLLQDLVPGCNKVVGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPQLDFNSLPNLL 363
Query: 431 MSKDIYQPNKPLPHSIFQIDSSASAF-FSHQPQQNPALHG--NISNGTMTQCPVDPLDNA 487
+ KDI+QP P PH F +++S + + QP L + G+M PLD A
Sbjct: 364 LPKDIHQPCGP-PH--FPLETSGAPLPYLSQPHHGSPLGCCMDTQGGSM-----HPLDAA 415
Query: 488 LCRNLSMQLPQLEQFTETIPQFQNFGEDDLQSIVQMGFGQNPNSETSLQSQSFHGSNQAP 547
CR ++ Q P L ++ Q F +DDLQS+V M GQ+ S S++GS Q
Sbjct: 416 FCRPMNPQHPFLNGASDAASQVGTFWQDDLQSVVHMDIGQS-QEIAPTSSNSYNGSLQTV 474
Query: 548 HMKAEL 553
HMK EL
Sbjct: 475 HMKMEL 480
>gi|326501104|dbj|BAJ98783.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 384
Score = 245 bits (625), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 181/432 (41%), Positives = 233/432 (53%), Gaps = 80/432 (18%)
Query: 138 LNSPPKLNLPMSLGNSMPLNSSVAEFSADPGFAERAARFSRFGSRSFNGRSTGQFVPNHN 197
L S P L+ M G + +F DPGFAERAAR S SFNG+
Sbjct: 17 LTSSPMLDFGMLDGAVTAGGDCLDKFCGDPGFAERAARLS-----SFNGQHLA------- 64
Query: 198 PDQFGLSRSNNNPNPMTANEKLPRVSSSPSLKVLGSQAQATGNKSPQDRSELANSQEESS 257
P G+ LP P E S+E SS
Sbjct: 65 PGLLGM---------------LP----------------------PAPGGEFGGSREASS 87
Query: 258 VSE--QVPNDFNSRKRKA-VSKGKGKETAASPSVNNTTKVAEANASESSKNKRCK----- 309
VS+ D N++KRKA SKGK KE PS++ + +V E ++ KRC+
Sbjct: 88 VSDPASAMKDANAKKRKAPASKGKAKE----PSLSTSCQVGEHKEPDA---KRCRTGDAE 140
Query: 310 -----PNEGKANGNGAVKAEDEGDDKQAKANNAKPPEPPKDYIHVRARRGQATDSHSLAE 364
P KA G+ + ++G+ ++ K NAKP EPPKDY+HVRARRGQATDSHSLAE
Sbjct: 141 KKAAAPVRPKAEQAGSDSSVEDGEQRKGKGKNAKPVEPPKDYVHVRARRGQATDSHSLAE 200
Query: 365 RVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMKLASVNTRLE 424
RVRRE+IS+RMK LQDLVPGCNKV GKALMLDEIINYVQSLQRQVEFLSMKLA+VN
Sbjct: 201 RVRRERISQRMKFLQDLVPGCNKVIGKALMLDEIINYVQSLQRQVEFLSMKLATVNPLDF 260
Query: 425 LNVDALMSKDIYQPNKPLPHSIFQIDSSASAF-FSHQPQQNPALHGNISNGTMTQCPVDP 483
N+ L+ KD+Y P+ S+F ++SS+SAF FS Q + N +QC ++
Sbjct: 261 SNLPTLLHKDMYGPSA---SSVFSLESSSSAFPFS---DQGDVFQSFLPNSMESQCTLNQ 314
Query: 484 LDNALCRNLSMQLPQLEQFTET--IPQFQNFGEDDLQSIVQMGFGQNPNSETSLQSQSFH 541
LD AL + + + T + + Q +NF EDDLQS+ + Q+ ++ S ++SFH
Sbjct: 315 LDLALSQATNAAQYGFQDATASTNLQQQRNFWEDDLQSVFHVDNRQSQDNGVS--AESFH 372
Query: 542 GSNQAPHMKAEL 553
G QA MK E
Sbjct: 373 GDLQAGQMKMEF 384
>gi|242082133|ref|XP_002445835.1| hypothetical protein SORBIDRAFT_07g026610 [Sorghum bicolor]
gi|241942185|gb|EES15330.1| hypothetical protein SORBIDRAFT_07g026610 [Sorghum bicolor]
Length = 397
Score = 243 bits (619), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 184/444 (41%), Positives = 241/444 (54%), Gaps = 64/444 (14%)
Query: 125 GSSSTNASCYTTPLNSPPKLNLPMSLG---NSMPLNSSVAEFSADPGFAERAARFSRFGS 181
GS + + L+S P+L+ + LG + +F DPGFA RAAR S F +
Sbjct: 3 GSRAGAGDYIASLLSSSPRLDFGV-LGAADGGGEEEDCLDKFCGDPGFAARAARLSSFSA 61
Query: 182 RSFNGRSTGQFVPNHNPDQFGLSRSNNNPNPMTANEKLPRVSSSPSLKVLGSQAQATGNK 241
+ F G ++ FGL P P+ A A+G
Sbjct: 62 QRFPGAAS----------LFGL------PPPVPA---------------------ASGG- 83
Query: 242 SPQDRSELANSQEESSVSE---QVPNDFNSRKRKA--VSKGKGKETA--ASPSVNNTTKV 294
E A S+E SSVS+ + D N++KRKA +KGKGKE++ A + TK
Sbjct: 84 -----GEFAGSREASSVSDPASAMMKDANAKKRKAPPAAKGKGKESSVQAGEQKDPDTKR 138
Query: 295 AEANASESSKNKRCKPNEGKANGNGAVKAEDEGDDKQ--AKANNAKPPEPPKDYIHVRAR 352
+ E + KP +A + +V ED G ++ K NAK EPPKDY+HVRAR
Sbjct: 139 CKTEGGEGKEGSPVKPKPEQAGSDSSV--EDGGQTQKPPGKGKNAKLVEPPKDYVHVRAR 196
Query: 353 RGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFL 412
RGQATDSHSLAERVRRE+IS+RMK+LQDLVPGCNKV GKALMLDEIINYVQSLQRQVEFL
Sbjct: 197 RGQATDSHSLAERVRRERISQRMKVLQDLVPGCNKVIGKALMLDEIINYVQSLQRQVEFL 256
Query: 413 SMKLASVNTRLELNVDALMSKDIYQPNKPLPHSIFQIDSSASAF-FSHQPQQNPALHGNI 471
SMKLA+VN N+ L+ KD++Q P S+F ++SS+S F FS +
Sbjct: 257 SMKLATVNPLDFSNLPTLLQKDMFQACGPSASSVFSLESSSSGFPFS---DHGDVFQSFV 313
Query: 472 SNGTMTQCPVDPLDNALCRNLSMQLP-QLEQFTETIPQFQNFGEDDLQSIVQMG-FGQNP 529
NG QC ++PLD AL + Q Q T Q +++ E+DLQS+ + GQ+
Sbjct: 314 PNGLENQCGLNPLDLALSHATTGQYGFQDGTAGTTNLQQRSYWEEDLQSVFHIDNNGQSQ 373
Query: 530 NSETSLQSQSFHGSNQAPHMKAEL 553
+ S+ +QSFHG Q HMK E
Sbjct: 374 ENGVSVSAQSFHGQLQEGHMKMEF 397
>gi|357148526|ref|XP_003574799.1| PREDICTED: transcription factor bHLH62-like [Brachypodium
distachyon]
Length = 401
Score = 237 bits (604), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 167/402 (41%), Positives = 206/402 (51%), Gaps = 67/402 (16%)
Query: 138 LNSPPKLNLPMSLGNSMPLNSSVAEFSADPGFAERAARFSRFGSRSFNGRSTGQF-VPNH 196
LNS P L+ + L + + +F DPGFAERAAR S F + F G + G F +P
Sbjct: 14 LNSSPMLDFGV-LDGTGAGGDCLDKFCGDPGFAERAARLSSFNGQRFPGAAAGLFGMPP- 71
Query: 197 NPDQFGLSRSNNNPNPMTANEKLPRVSSSPSLKVLGSQAQATGNKSPQDRSELANSQEES 256
P P +N A S+E S
Sbjct: 72 -------------PAPAASNGDFGG----------------------------AGSREAS 90
Query: 257 SVSEQVPNDFNSRKRKAVSKGKGKETAASPSVNNTTKVAEANASESSKNKRC-------- 308
SVS+ K K A PS++ + +V + ++ KRC
Sbjct: 91 SVSDPASGMMKDANAKKRKASAAKGKAREPSLSTSGQVGDQKELDA---KRCRTGDAEKK 147
Query: 309 ----KPNEGKANGNGAVKAEDEGDDKQAKANNAKPPEPPKDYIHVRARRGQATDSHSLAE 364
KP +A +V ED G+ K+ K NAKP EPPKDY+HVRARRGQATDSHSLAE
Sbjct: 148 TAPVKPKAEQARSGSSV--EDYGEPKKGKGKNAKPVEPPKDYVHVRARRGQATDSHSLAE 205
Query: 365 RVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMKLASVNTRLE 424
RVRRE+IS+RMK LQDLVPGCNKV GKALMLDEIINYVQSLQRQVEFLSMKLA+VN
Sbjct: 206 RVRRERISQRMKFLQDLVPGCNKVIGKALMLDEIINYVQSLQRQVEFLSMKLATVNPLDF 265
Query: 425 LNVDALMSKDIYQPNKPLPHSIFQIDSSASAF-FSHQPQQNPALHGNISNGTMTQCPVDP 483
N+ L+ KD+YQ P S+F ++SS SAF FS Q + N +QC ++
Sbjct: 266 SNLPTLLHKDMYQACGPSASSVFSLESSNSAFPFSD---QGDVFQSFVPNSMESQCTLNQ 322
Query: 484 LDNALCRNLSMQLPQLEQFTETIPQFQ--NFGEDDLQSIVQM 523
LD AL S Q + T Q Q NF EDDLQS+ +
Sbjct: 323 LDLALSHATSAQYAFQDGTGSTNLQQQQRNFWEDDLQSVFHV 364
>gi|297835410|ref|XP_002885587.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297331427|gb|EFH61846.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 374
Score = 234 bits (597), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 136/276 (49%), Positives = 171/276 (61%), Gaps = 37/276 (13%)
Query: 257 SVSEQV-PNDFNSRKRKAVSKGKGKETAASPSVNNTTKVAEANASESSKNKRCKPNEGKA 315
SVS++V NSRKRK++ G GKE+ AS S+ + S KR K +E +
Sbjct: 105 SVSDRVHTTKSNSRKRKSIPSGNGKESPASSSLTASNSKVSGENGGSKGGKRSKQDEAGS 164
Query: 316 NGNGAVKAEDEGDDKQAKANNAKPPEPPKDYIHVRARRGQATDSHSLAERVRREKISERM 375
+ NG K + +GD+K ++AKPPE PKDYIHVRARRGQATDSHSLAER RREKISERM
Sbjct: 165 SKNGVEKCDSKGDNK----DDAKPPEAPKDYIHVRARRGQATDSHSLAERARREKISERM 220
Query: 376 KLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMKLASVNTRLELNVDALMSKDI 435
LLQDLVPGCN++TGKA+MLDEIINYVQSLQRQVEFLSMKLA+VN R+E N +A +S ++
Sbjct: 221 TLLQDLVPGCNRITGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRMEFNANAALSTEM 280
Query: 436 YQPNKPLPHSIFQIDSSA----SAFFSHQPQQNPALHGNISNGTMTQCPVDPLDNALCRN 491
QP + L S++ + S SA++S L + R
Sbjct: 281 IQPGESLTQSLYAMACSEQRLPSAYYS-------------------------LGKNMPRF 315
Query: 492 LSMQLPQLEQFTET-IPQFQNFGEDDLQSIVQMGFG 526
Q P + F + P F + +DLQSIVQMGFG
Sbjct: 316 SDTQFPSNDGFVQAETPGF--WENNDLQSIVQMGFG 349
>gi|22331295|ref|NP_189011.2| transcription factor bHLH77 [Arabidopsis thaliana]
gi|75311240|sp|Q9LK48.1|BH077_ARATH RecName: Full=Transcription factor bHLH77; AltName: Full=Basic
helix-loop-helix protein 77; Short=AtbHLH77; Short=bHLH
77; AltName: Full=Transcription factor EN 87; AltName:
Full=bHLH transcription factor bHLH077
gi|9293943|dbj|BAB01846.1| unnamed protein product [Arabidopsis thaliana]
gi|17529310|gb|AAL38882.1| putative DNA-binding protein [Arabidopsis thaliana]
gi|20465453|gb|AAM20186.1| putative DNA-binding protein [Arabidopsis thaliana]
gi|332643281|gb|AEE76802.1| transcription factor bHLH77 [Arabidopsis thaliana]
Length = 371
Score = 231 bits (590), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 136/276 (49%), Positives = 170/276 (61%), Gaps = 37/276 (13%)
Query: 257 SVSEQV-PNDFNSRKRKAVSKGKGKETAASPSVNNTTKVAEANASESSKNKRCKPNEGKA 315
SVS++V NSRKRK++ G GKE+ AS S+ + S KR K + +
Sbjct: 102 SVSDRVHTTKSNSRKRKSIPSGNGKESPASSSLTASNSKVSGENGGSKGGKRSKQDVAGS 161
Query: 316 NGNGAVKAEDEGDDKQAKANNAKPPEPPKDYIHVRARRGQATDSHSLAERVRREKISERM 375
+ NG K + +GD+K ++AKPPE PKDYIHVRARRGQATDSHSLAER RREKISERM
Sbjct: 162 SKNGVEKCDSKGDNK----DDAKPPEAPKDYIHVRARRGQATDSHSLAERARREKISERM 217
Query: 376 KLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMKLASVNTRLELNVDALMSKDI 435
LLQDLVPGCN++TGKA+MLDEIINYVQSLQRQVEFLSMKLA+VN R+E N +A +S ++
Sbjct: 218 TLLQDLVPGCNRITGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRMEFNANASLSTEM 277
Query: 436 YQPNKPLPHSIFQIDSSA----SAFFSHQPQQNPALHGNISNGTMTQCPVDPLDNALCRN 491
QP + L S++ + S SA++S L + R
Sbjct: 278 IQPGESLTQSLYAMACSEQRLPSAYYS-------------------------LGKNMPRF 312
Query: 492 LSMQLPQLEQFTET-IPQFQNFGEDDLQSIVQMGFG 526
Q P + F T P F + +DLQSIVQMGFG
Sbjct: 313 SDTQFPSNDGFVHTETPGF--WENNDLQSIVQMGFG 346
>gi|115477387|ref|NP_001062289.1| Os08g0524800 [Oryza sativa Japonica Group]
gi|29647487|dbj|BAC75416.1| bHLH transcription factor(GBOF-1)-like [Oryza sativa Japonica
Group]
gi|113624258|dbj|BAF24203.1| Os08g0524800 [Oryza sativa Japonica Group]
Length = 405
Score = 228 bits (580), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 132/263 (50%), Positives = 161/263 (61%), Gaps = 16/263 (6%)
Query: 303 SKNKRCKPNEGKANGNGAVKAEDEGDDKQAK-----------ANNAKPPEPPKDYIHVRA 351
S KRCK G+ + KAE G D + NAKP EPPKDY+HVRA
Sbjct: 147 SDGKRCKTGNGEKESSVKPKAEQAGSDSSVEDGGGGGQKQGKGKNAKPVEPPKDYVHVRA 206
Query: 352 RRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEF 411
RRGQATDSHSLAERVRRE+IS+RMK+LQDLVPGCNKV GKALMLDEIINYVQSLQRQVEF
Sbjct: 207 RRGQATDSHSLAERVRRERISQRMKVLQDLVPGCNKVIGKALMLDEIINYVQSLQRQVEF 266
Query: 412 LSMKLASVNTRLELNVDALMSKDIYQPNKPLPHSIFQIDSSASAFFSHQPQQNPALHGNI 471
LSMKLA+VN N+ L+ KD++Q P S+F ++SS SAF +Q
Sbjct: 267 LSMKLATVNPLDFSNLPTLLQKDMFQACGPSASSVFSLESSNSAF--RFAEQGDVFQQFA 324
Query: 472 SNGTMTQCPVDPLDNALCRNLSMQLPQLEQFTETI-PQFQNFGEDDLQSIVQMGFGQNPN 530
N +QC ++ LD AL + + + T Q +NF EDDLQS+ + GQ +
Sbjct: 325 QNSMESQCTLNQLDLALSQATNAAQYAFQDGTAGANLQQRNFWEDDLQSVFHIENGQ--S 382
Query: 531 SETSLQSQSFHGSNQAPHMKAEL 553
E + + +FHG QA HMK E
Sbjct: 383 QENGVSAPNFHGQQQAGHMKMEF 405
>gi|218201482|gb|EEC83909.1| hypothetical protein OsI_29959 [Oryza sativa Indica Group]
Length = 405
Score = 226 bits (576), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 133/264 (50%), Positives = 163/264 (61%), Gaps = 18/264 (6%)
Query: 303 SKNKRCKPNEGKANGNGAVKAEDEGDDKQAK-----------ANNAKPPEPPKDYIHVRA 351
S KRCK G+ + KAE G D + NAKP EPPKDY+HVRA
Sbjct: 147 SDGKRCKTGNGEKESSVKPKAEQAGSDSSVEDGSGGGQKQGKGKNAKPVEPPKDYVHVRA 206
Query: 352 RRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEF 411
RRGQATDSHSLAERVRRE+IS+RMK+LQDLVPGCNKV GKALMLDEIINYVQSLQRQVEF
Sbjct: 207 RRGQATDSHSLAERVRRERISQRMKVLQDLVPGCNKVIGKALMLDEIINYVQSLQRQVEF 266
Query: 412 LSMKLASVNTRLELNVDALMSKDIYQPNKPLPHSIFQIDSSASAF-FSHQPQQNPALHGN 470
LSMKLA+VN N+ L+ KD++Q P S+F ++SS SAF F+ +Q
Sbjct: 267 LSMKLATVNPLDFSNLPTLLQKDMFQACGPSASSVFSLESSNSAFPFA---EQGDVFQQF 323
Query: 471 ISNGTMTQCPVDPLDNALCRNLSMQLPQLEQFTETI-PQFQNFGEDDLQSIVQMGFGQNP 529
N +QC ++ LD AL + + + T Q +NF EDDLQS+ + GQ
Sbjct: 324 AQNSMESQCTLNQLDLALSQATNAAQYAFQDGTAGANLQQRNFWEDDLQSVFHIENGQ-- 381
Query: 530 NSETSLQSQSFHGSNQAPHMKAEL 553
+ E + + +FHG QA HMK E
Sbjct: 382 SQENGVSAPNFHGQLQAGHMKMEF 405
>gi|323388953|gb|ADX60281.1| bHLH transcription factor [Oryza sativa Japonica Group]
Length = 405
Score = 226 bits (575), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 132/263 (50%), Positives = 160/263 (60%), Gaps = 16/263 (6%)
Query: 303 SKNKRCKPNEGKANGNGAVKAEDEGDDKQAK-----------ANNAKPPEPPKDYIHVRA 351
S KRCK G+ + KAE G D + NAKP EPPKDY+HVRA
Sbjct: 147 SDGKRCKTGNGEKESSVKPKAEQAGSDSSVEDGGGGGQKQGKGKNAKPVEPPKDYVHVRA 206
Query: 352 RRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEF 411
RRGQATDSHSLAERVRRE+IS+RMK+LQDLVPGCNKV GKALMLDEIINYVQSLQRQVEF
Sbjct: 207 RRGQATDSHSLAERVRRERISQRMKVLQDLVPGCNKVIGKALMLDEIINYVQSLQRQVEF 266
Query: 412 LSMKLASVNTRLELNVDALMSKDIYQPNKPLPHSIFQIDSSASAFFSHQPQQNPALHGNI 471
LSMKLA+VN N+ L+ KD+ Q P S+F ++SS SAF +Q
Sbjct: 267 LSMKLATVNPLDFSNLPTLLQKDMLQACGPSASSVFSLESSNSAF--RFAEQGDVFQQFA 324
Query: 472 SNGTMTQCPVDPLDNALCRNLSMQLPQLEQFTETI-PQFQNFGEDDLQSIVQMGFGQNPN 530
N +QC ++ LD AL + + + T Q +NF EDDLQS+ + GQ +
Sbjct: 325 QNSMESQCTLNQLDLALSQATNAAQYAFQDGTAGANLQQRNFWEDDLQSVFHIENGQ--S 382
Query: 531 SETSLQSQSFHGSNQAPHMKAEL 553
E + + +FHG QA HMK E
Sbjct: 383 QENGVSAPNFHGQQQAGHMKMEF 405
>gi|297738215|emb|CBI27416.3| unnamed protein product [Vitis vinifera]
Length = 496
Score = 218 bits (554), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 161/403 (39%), Positives = 225/403 (55%), Gaps = 39/403 (9%)
Query: 156 LNSSVAEFSADPGFAERAARFSRFGSRSFNGRSTGQFVPNHNPDQFGLSRSNNNPNPMTA 215
L +++F AD GF ERAARFS FNG G F NP F + S N P
Sbjct: 128 LPQGLSQFPADSGFIERAARFS-----CFNG---GNFSDMMNP--FSIPESLN-PYSRGG 176
Query: 216 NEKLPRVSSSPSLK-VLGSQAQATGNKSPQDRSELANSQEESSVSEQVPNDFNSRKRKAV 274
V +S LK V G Q+Q + +++++++ + P+ K +
Sbjct: 177 GMLQQDVFASNGLKSVPGGQSQKDEPSMAEISKDVSSAKQNKELGCGEPS-----SGKGL 231
Query: 275 SKGKGKETAASPSVNNTTKVAEANASESSKNKRCKPNEGKANGNGAVKAEDEGDDKQAKA 334
K K + P ++ K + E+SK+ ++G N + +V +++ G + A
Sbjct: 232 GSKKRKRSGQDPEIDQV-KGSPQQPGEASKDNPEIQHKGDQNPS-SVPSKNTGKHGKQGA 289
Query: 335 NNAKPPEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALM 394
+ PP+ ++YIHVRARRGQAT+SHSLAERVRREKISERMK LQDLVPGC+KVTGKA+M
Sbjct: 290 QASDPPK--EEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVM 347
Query: 395 LDEIINYVQSLQRQVEFLSMKLASVNTRLELNVDALMSKDIYQPNKPLPHSIFQIDSSAS 454
LDEIINYVQSLQRQVEFLSMKLA+VN RL+ N++ ++ KDI Q ++ P S +
Sbjct: 348 LDEIINYVQSLQRQVEFLSMKLATVNPRLDFNIEGMLGKDILQ-SRVGPSSTMGFSPETT 406
Query: 455 AFFSHQPQQNPALHGNISNGTMTQCPVDPLDN---ALCRNLSMQLPQLE-QFTETIPQFQ 510
+ PQ +P+ G + Q + L N A+ R ++ QL + + E+ PQ
Sbjct: 407 MPY---PQLHPSQPG------LIQVGLPGLGNSSDAIRRTINSQLAAMSGGYKESAPQLP 457
Query: 511 NFGEDDLQSIVQMGFGQNPNSETSLQSQSFHGSNQAPHMKAEL 553
N ED+L ++VQMGF ++ L SQ +GS HMKAEL
Sbjct: 458 NVWEDELHNVVQMGF----STGAPLNSQDLNGSLPPGHMKAEL 496
>gi|224108619|ref|XP_002314910.1| predicted protein [Populus trichocarpa]
gi|222863950|gb|EEF01081.1| predicted protein [Populus trichocarpa]
Length = 562
Score = 212 bits (540), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 157/418 (37%), Positives = 214/418 (51%), Gaps = 57/418 (13%)
Query: 151 GNSMP-----LNSSVAEFSADPGFAERAARFSRFGSRSFNGRSTGQFV-PNHNPDQFGL- 203
GN +P L S+++F AD F ERAARFS FNG G V P P+ GL
Sbjct: 137 GNFLPNAPGMLPQSLSQFPADSAFIERAARFS-----CFNGGDFGDMVNPFGVPESMGLF 191
Query: 204 SRSNN---NPNPMTANEKLPRVSSSPSLKVLGSQAQATGN---------------KSPQD 245
SR P + + VS + K + + +A+ + K+
Sbjct: 192 SRGGGMMQGPGEVFVGSGMKSVSGGQAQKNVMNAGEASKDVSMSVDHMATEGSPLKNETK 251
Query: 246 RSELANSQEESSVSEQVPNDFNSRKRKAVSKGKGKETAASPSVNNTTKVAEANASESSKN 305
R LA S++E+ + V N S G G++ + N A++ S+ K
Sbjct: 252 RESLARSRDEA--KKGVGGSGNDSDEAEFSGGSGQDEPSLLEGNCGELSAKSLGSKKRKR 309
Query: 306 KRCKPNEGKANGN-----GAVKAEDEGDD-----------KQAKANNAKPPEPPKDYIHV 349
+A G G+ + + +GD KQ K + +P ++YIHV
Sbjct: 310 SGEDAELDQAKGTPQSAKGSPETQQKGDQKPTSTTSKASGKQGKQGSQGSDQPKEEYIHV 369
Query: 350 RARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQV 409
RARRGQAT+SHSLAERVRREKISERMK LQDLVPGC+KVTGKA+MLDEIINYVQSLQRQV
Sbjct: 370 RARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQV 429
Query: 410 EFLSMKLASVNTRLELNVDALMSKDIYQPNKPLPHSIFQIDSSASAFFSHQPQQNPALHG 469
EFLSMKLA+VN RL+ N++ L++KDI Q P S+ AF S P PALH
Sbjct: 430 EFLSMKLATVNPRLDFNIEGLLAKDILQSRAVPPSSL--------AFSSEMPMAYPALHQ 481
Query: 470 NISNGTMTQCP-VDPLDNALCRNLSMQLPQLEQFTETIPQFQNFGEDDLQSIVQMGFG 526
+ T P ++ + + R ++ QL + + Q N +D+L ++VQM +G
Sbjct: 482 SQPGLIPTAFPGMESHSDIIRRTINSQLTAMTAGFKEPAQLPNVWDDELHNVVQMTYG 539
>gi|46367684|emb|CAE00874.1| TA1 protein [Oryza sativa Japonica Group]
Length = 204
Score = 212 bits (540), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 119/210 (56%), Positives = 145/210 (69%), Gaps = 21/210 (10%)
Query: 276 KGKGKETAASPSVNNTTKVAEANASESSKNKRCKPNE----GKANGNGAVKA-----EDE 326
KGKGK++ S S A E S KRCK E +G KA E+
Sbjct: 2 KGKGKDSPMSTSA----------AKEDSSGKRCKSTEESNAAAEENSGKGKAAQSNSENG 51
Query: 327 GDDKQAKANNAKPPEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCN 386
G KQ K +++KPPEPPKDYIHVRARRG+ATDSHSLAERVRREKIS+RMKLLQDLVPGCN
Sbjct: 52 GGKKQGKDSSSKPPEPPKDYIHVRARRGEATDSHSLAERVRREKISQRMKLLQDLVPGCN 111
Query: 387 KVTGKALMLDEIINYVQSLQRQVEFLSMKLASVNTRLEL-NVDALMSKDIYQPNKPLPHS 445
KV GKA+MLDEIINYVQSLQRQVEFLSMKLA+VN +L+ N+ L++KD++Q PL S
Sbjct: 112 KVVGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPQLDFNNLPNLLAKDMHQSCSPLQSS 171
Query: 446 IFQIDSSASAF-FSHQPQQNPALHGNISNG 474
F +++S + + +QPQQ L ++NG
Sbjct: 172 HFPLETSGAPLPYINQPQQGNPLGCGLTNG 201
>gi|226498378|ref|NP_001148110.1| BHLH transcription factor [Zea mays]
gi|195615854|gb|ACG29757.1| BHLH transcription factor [Zea mays]
Length = 403
Score = 210 bits (535), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 165/416 (39%), Positives = 202/416 (48%), Gaps = 74/416 (17%)
Query: 163 FSADPGFAERAARFSRFGSRSFNGRSTGQFVPNHNPDQFGLSRSNNNPNPMTANEKLPRV 222
F DPGFA RAAR S F + F FGL P P++A
Sbjct: 36 FCGDPGFAARAARLSSFSGQRF----------AVTAGLFGL------PPPLSA------- 72
Query: 223 SSSPSLKVLGSQAQATGNKSPQDRSELANSQEESSVSEQVPNDFNSRKRKAVSKGKGKET 282
A+G E A S+E SSVS+ ++ K K K
Sbjct: 73 --------------ASGGG-----GEFAGSREASSVSDPA----SAMKDANAKKRKAPAA 109
Query: 283 AASPSVNNTTKVAEANASESSKNKRCKPNEGKANGNGA----VKAEDEGDDKQ------- 331
AA + A+A + KRC EG G+ K E G D
Sbjct: 110 AAKGKGREPSAQAQAGEPKGPDAKRCCKAEGGEGVEGSPVKLPKPEQAGSDSSVEDGGGA 169
Query: 332 -------AKANNAKPPEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPG 384
K NAKP EPP+DY+HVRARRGQATDSHSLAERVRRE+IS+RMK+LQDLVPG
Sbjct: 170 QNQKPPPGKGKNAKPVEPPRDYVHVRARRGQATDSHSLAERVRRERISQRMKVLQDLVPG 229
Query: 385 CNKVTGKALMLDEIINYVQSLQRQVEFLSMKLASVNTRLELNVDALMSKDIYQPNKPLPH 444
CNKV GKALMLDEIINYVQSLQRQVEFLSMKLA+VN N+ L+ KD++Q
Sbjct: 230 CNKVIGKALMLDEIINYVQSLQRQVEFLSMKLATVNPLDLSNLPTLLQKDMFQACGASAS 289
Query: 445 SIFQIDSSASAF-FSHQPQQNPALHGNISNGTMTQC-PVDPLDNALCRNLSMQLPQLEQF 502
S+F ++S + F F Q NG C ++PLD AL Q +
Sbjct: 290 SVFSLESCSPGFPFGG---QGDVFQSFAPNGLENPCGGLNPLDLALSHATGGQFGFQDGT 346
Query: 503 TETIPQFQNFG--EDDLQSIVQMGF-GQNPNSETSLQSQSFHG--SNQAPHMKAEL 553
T Q +N+ E+DLQS+ + GQ+ S +QSFHG +Q HMK E
Sbjct: 347 AGTNLQQRNYWEEEEDLQSVFHIDDNGQSQEHGASASAQSFHGQLQSQEGHMKMEF 402
>gi|194692938|gb|ACF80553.1| unknown [Zea mays]
gi|414886197|tpg|DAA62211.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 353
Score = 209 bits (533), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 147/316 (46%), Positives = 177/316 (56%), Gaps = 32/316 (10%)
Query: 252 SQEESSVSE----QVPNDFNSRKRKAVSKGKGKETAASPSVNNTTKVAEANASESSKNKR 307
S E SSVS+ + D N RKRKA G A P K AEA + KR
Sbjct: 56 SPEGSSVSDPAWARARGDDNVRKRKAPPTGSAGGKEACPG-----KAAEAKGPD---GKR 107
Query: 308 CK------PNEGKANGNGAVKAEDE-GDDKQAKANNAKPP-EPPKDYIHVRARRGQATDS 359
C+ P + K A A E K+ K AKP EPPKDY+HVRARRGQATDS
Sbjct: 108 CRVGGSDSPVKPKVEEVAASDASVELKAQKKGKGKTAKPAVEPPKDYVHVRARRGQATDS 167
Query: 360 HSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMKLASV 419
HSLAERVRREKIS+RMK LQDLVPGCNKV GKALMLDEIINYVQSLQ+QVEFLSMKLA+V
Sbjct: 168 HSLAERVRREKISQRMKFLQDLVPGCNKVVGKALMLDEIINYVQSLQQQVEFLSMKLATV 227
Query: 420 NTRLEL-NVDALMSKDIYQPNKPLPHSIFQIDSSASAF-FSHQPQQNPALHGNISNGTMT 477
N +L+ N+ L+ KD+YQP P +S+F ++S +AF F Q + G+ S
Sbjct: 228 NPQLDFSNLSTLLHKDMYQPCGPSANSVFPLESDGAAFPFCDQADLFHSF-GSGSAAMED 286
Query: 478 QCPVDPLDNALCRNLSMQLPQLEQFTETIPQFQNFGEDDLQSIVQMGFGQNPNSETSLQS 537
QC + LD AL + Q +Q ++F ED LQ+ + G Q E L
Sbjct: 287 QCSLSLLDTALPHAANPQFAFQKQ--------RDFWEDGLQNALPTGSEQR-QEEDGLLV 337
Query: 538 QSFHGSNQAPHMKAEL 553
+F G A K E
Sbjct: 338 PNFDGQLHADQTKVEF 353
>gi|356495611|ref|XP_003516668.1| PREDICTED: transcription factor bHLH49-like [Glycine max]
Length = 414
Score = 209 bits (533), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 171/434 (39%), Positives = 224/434 (51%), Gaps = 63/434 (14%)
Query: 159 SVAEFSADPGFAERAARFSRFGSRSFN--------GRSTGQF-----VPNHNPDQF-GLS 204
++++F D GF ERAARFS F +F+ +S G + + H G
Sbjct: 5 TLSQFPTDSGFIERAARFSCFSGGNFSDMVNSYGIAQSMGLYGARDAIAGHGMKSVTGGQ 64
Query: 205 RSNNNPNPMTANEKLPRVSSSPSLKVLGSQAQATGNKSPQDRSELAN--SQEESSVSEQV 262
+ N + A + + SPS++ L A G+ DR + SQ+E S
Sbjct: 65 SQGGDMNVVEATKDV-----SPSVEHL---VAAKGSPLKSDRRSEGHVISQDEGKQSLVR 116
Query: 263 PNDFNSRKRKAVSKGKGKETAASPSVNNTTKVAEANASESSKNKRCKPNEGKANGNGAVK 322
P + + R A S G SP + T+ + + K KR + NGA +
Sbjct: 117 PANESDR---AESSDDGGGQDDSPMLEGTSGEPSSKGLNTKKRKRSGQDGDNDKANGAQE 173
Query: 323 -----AED------EGDDK-----QAKANNAK----PPEPPKD-YIHVRARRGQATDSHS 361
AED +GD + +A NAK +PPK+ YIHVRARRGQAT+SHS
Sbjct: 174 LPSEGAEDNYENQQKGDHQPTSTAKASGKNAKLGSQASDPPKEEYIHVRARRGQATNSHS 233
Query: 362 LAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMKLASVNT 421
LAERVRREKISERMK LQDLVPGC+KVTGKA+MLDEIINYVQSLQRQVEFLSMKLA+VN
Sbjct: 234 LAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNP 293
Query: 422 RLELNVDALMSKDIYQPNKPLPHSI--FQIDSSASAFFSHQPQQNPALHGNISNGTMTQC 479
RL+ N++ L++KDI Q +P P S F +D S AF P Q +H I N +
Sbjct: 294 RLDFNIEGLLAKDILQ-QRPGPSSALGFPLDMSM-AFPPLHPPQPGLIHPVIPNMANSS- 350
Query: 480 PVDPLDNALCRNLSMQLPQLEQFTETIPQFQNFGEDDLQSIVQMGFGQNPNSETSLQSQS 539
+ L R + QL L + Q + ED+L ++VQM F + L SQ
Sbjct: 351 ------DILQRTIHPQLAPLNGGLKEPNQLPDVWEDELHNVVQMSFA----TTAPLTSQD 400
Query: 540 FHGSNQAPHMKAEL 553
F G+ A MK EL
Sbjct: 401 FDGTGPASQMKVEL 414
>gi|414886196|tpg|DAA62210.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 354
Score = 209 bits (532), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 148/316 (46%), Positives = 178/316 (56%), Gaps = 31/316 (9%)
Query: 252 SQEESSVSE----QVPNDFNSRKRKAVSKGKGKETAASPSVNNTTKVAEANASESSKNKR 307
S E SSVS+ + D N RKRKA G A P K AEA + KR
Sbjct: 56 SPEGSSVSDPAWARARGDDNVRKRKAPPTGSAGGKEACPG-----KAAEAKGPD---GKR 107
Query: 308 CK------PNEGKANGNGAVKAEDE-GDDKQAKANNAKPP-EPPKDYIHVRARRGQATDS 359
C+ P + K A A E K+ K AKP EPPKDY+HVRARRGQATDS
Sbjct: 108 CRVGGSDSPVKPKVEEVAASDASVELKAQKKGKGKTAKPAVEPPKDYVHVRARRGQATDS 167
Query: 360 HSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMKLASV 419
HSLAERVRREKIS+RMK LQDLVPGCNKV GKALMLDEIINYVQSLQ+QVEFLSMKLA+V
Sbjct: 168 HSLAERVRREKISQRMKFLQDLVPGCNKVVGKALMLDEIINYVQSLQQQVEFLSMKLATV 227
Query: 420 NTRLEL-NVDALMSKDIYQPNKPLPHSIFQIDSSASAF-FSHQPQQNPALHGNISNGTMT 477
N +L+ N+ L+ KD+YQP P +S+F ++S +AF F Q + G+ S
Sbjct: 228 NPQLDFSNLSTLLHKDMYQPCGPSANSVFPLESDGAAFPFCDQADLFHSF-GSGSAAMED 286
Query: 478 QCPVDPLDNALCRNLSMQLPQLEQFTETIPQFQNFGEDDLQSIVQMGFGQNPNSETSLQS 537
QC + LD AL + Q F + Q ++F ED LQ+ + G Q E L
Sbjct: 287 QCSLSLLDTALPHAANPQF----AFQK---QQRDFWEDGLQNALPTGSEQR-QEEDGLLV 338
Query: 538 QSFHGSNQAPHMKAEL 553
+F G A K E
Sbjct: 339 PNFDGQLHADQTKVEF 354
>gi|359473485|ref|XP_003631305.1| PREDICTED: LOW QUALITY PROTEIN: transcription factor bHLH49-like
[Vitis vinifera]
Length = 609
Score = 209 bits (531), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 164/446 (36%), Positives = 231/446 (51%), Gaps = 65/446 (14%)
Query: 156 LNSSVAEFSADPGFAERAARFSRFGSRSFNGRSTGQFVPNH-NP----------DQFGLS 204
L +++F AD GF ERAARFS F +F+ +P NP D F +
Sbjct: 181 LPQGLSQFPADSGFIERAARFSCFNGGNFSDMMNPFSIPESLNPYSRGGGMLQQDVFASN 240
Query: 205 RSNNNPNPMTANEK--LPRVSSSPSLKVLGSQ------------------------AQAT 238
+ P + ++ + +S S V G+ +
Sbjct: 241 GLKSVPGGQSQKDEPSMAEISKDVSSAVRGAMEGSPLKNERKSESLVKSLEEAKQGIGVS 300
Query: 239 GNKSPQDRSELA----NSQEESSVSEQVPNDFNSRKRKAVSKGKGKETAASPSVNNTTKV 294
GN+S D +E + QEE S+ E + +S K + K K + P ++ K
Sbjct: 301 GNES--DEAEFSGGGGGGQEEPSILEGTGGEPSS--GKGLGSKKRKRSGQDPEIDQ-VKG 355
Query: 295 AEANASESSKNKRCKPNEGKANGNGAVKAEDEGDDKQAKANNAKPPEPPKDYIHVRARRG 354
+ E+SK+ ++G N + +V +++ G + A + PP+ ++YIHVRARRG
Sbjct: 356 SPQQPGEASKDNPEIQHKGDQNPS-SVPSKNTGKHGKQGAQASDPPK--EEYIHVRARRG 412
Query: 355 QATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSM 414
QAT+SHSLAERVRREKISERMK LQDLVPGC+KVTGKA+MLDEIINYVQSLQRQVEFLSM
Sbjct: 413 QATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSM 472
Query: 415 KLASVNTRLELNVDALMSKDIYQPNKPLPHSIFQIDSSASAFFSHQPQQN---PALHGNI 471
KLA+VN RL+ N++ ++ KD+ + I Q S+ P+ P LH
Sbjct: 473 KLATVNPRLDFNIEGMLGKDVSEIAX---QKILQSRVGPSSTMGFSPETTMPYPQLH--P 527
Query: 472 SNGTMTQCPVDPLDN---ALCRNLSMQLPQLE-QFTETIPQFQNFGEDDLQSIVQMGFGQ 527
S + Q + L N A+ R ++ QL + + E+ PQ N ED+L ++VQMGF
Sbjct: 528 SQPGLIQVGLPGLGNSSDAIRRTINSQLAAMSGGYKESAPQLPNVWEDELHNVVQMGF-- 585
Query: 528 NPNSETSLQSQSFHGSNQAPHMKAEL 553
++ L SQ +GS HMKAEL
Sbjct: 586 --STGAPLNSQDLNGSLPPGHMKAEL 609
>gi|212721436|ref|NP_001132323.1| uncharacterized protein LOC100193765 [Zea mays]
gi|194694078|gb|ACF81123.1| unknown [Zea mays]
gi|414869584|tpg|DAA48141.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 404
Score = 208 bits (529), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 166/418 (39%), Positives = 205/418 (49%), Gaps = 77/418 (18%)
Query: 163 FSADPGFAERAARFSRFGSRSFNGRSTGQFVPNHNPDQFGLSRSNNNPNPMTANEKLPRV 222
F DPGFA RAAR S F + F + FGL P P+ A
Sbjct: 36 FCGDPGFAARAARLSSFSGQRFAVTAG----------LFGL------PPPLPA------- 72
Query: 223 SSSPSLKVLGSQAQATGNKSPQDRSELANSQEESSVSE------QVPNDFNSRKRKAVSK 276
A+G E A S+E SSVS+ A +K
Sbjct: 73 --------------ASGG------GEFAGSREASSVSDPASAMKDANAKKRKAPAAAAAK 112
Query: 277 GKGKETAA--------SPSVNNTTKVAEANASESSKNKRCKPNEGKANGNGAVKAEDEGD 328
GKG+E +A P K E S K KP + ++ + ED G
Sbjct: 113 GKGREPSAQAQAGEPKGPDAKRCCKAEGGEGEEGSPVKLPKPEQAGSDSS----VEDGGA 168
Query: 329 DKQ-----AKANNAKPPEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVP 383
Q K NAKP EPP+DY+HVRARRGQATDSHSLAERVRRE+IS+RMK+LQDLVP
Sbjct: 169 QNQKPPPPVKGKNAKPVEPPRDYVHVRARRGQATDSHSLAERVRRERISQRMKVLQDLVP 228
Query: 384 GCNKVTGKALMLDEIINYVQSLQRQVEFLSMKLASVNTRLELNVDALMSKDIYQPNKPLP 443
GCNKV GKALMLDEIINYVQSLQRQVEFLSMKLA+VN N+ L+ KD++Q
Sbjct: 229 GCNKVIGKALMLDEIINYVQSLQRQVEFLSMKLATVNPLDLSNLPTLLQKDMFQACGASA 288
Query: 444 HSIFQIDSSASAF-FSHQPQQNPALHGNISNGTMTQC-PVDPLDNALCRNLSMQLPQLEQ 501
S+F ++S + F F Q + NG C ++PLD AL + Q +
Sbjct: 289 SSVFSLESCSPGFPFGG---QGDVFQSFVPNGLENPCGGLNPLDLALSQATGGQFGFQDG 345
Query: 502 FTETIPQFQNFG---EDDLQSIVQMGF-GQNPNSETSLQSQSFHG--SNQAPHMKAEL 553
T Q +N+ E+DLQS+ + GQ+ S +QSFHG Q HMK E
Sbjct: 346 TAGTNLQQRNYWEEEEEDLQSVFHIDDNGQSQEHGASASAQSFHGQLQPQEGHMKMEF 403
>gi|226497606|ref|NP_001151910.1| BHLH transcription factor [Zea mays]
gi|195650891|gb|ACG44913.1| BHLH transcription factor [Zea mays]
Length = 354
Score = 207 bits (527), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 147/316 (46%), Positives = 178/316 (56%), Gaps = 31/316 (9%)
Query: 252 SQEESSVSE----QVPNDFNSRKRKAVSKGKGKETAASPSVNNTTKVAEANASESSKNKR 307
S E SSVS+ + +D N RKRK G A P K AEA + KR
Sbjct: 56 SPEGSSVSDPAWARARDDDNVRKRKEPPTGSAGGKEACPG-----KAAEAKGPD---GKR 107
Query: 308 CK------PNEGKANGNGAVKAEDE-GDDKQAKANNAKPP-EPPKDYIHVRARRGQATDS 359
C+ P + K A A E K+ K AKP EPPKDY+HVRARRGQATDS
Sbjct: 108 CRVGGSDSPVKPKVEEVAASDASVELKAQKKGKGKTAKPAVEPPKDYVHVRARRGQATDS 167
Query: 360 HSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMKLASV 419
HSLAERVRREKIS+RMK LQDLVPGCNKV GKALMLDEIINYVQSLQ+QVEFLSMKLA+V
Sbjct: 168 HSLAERVRREKISQRMKFLQDLVPGCNKVVGKALMLDEIINYVQSLQQQVEFLSMKLATV 227
Query: 420 NTRLEL-NVDALMSKDIYQPNKPLPHSIFQIDSSASAF-FSHQPQQNPALHGNISNGTMT 477
N +L+ N+ L+ KD+YQP P +S+F ++S +AF F Q + G+ S
Sbjct: 228 NPQLDFSNLSTLLHKDMYQPCGPSANSVFPLESDGAAFPFCDQADLFHSF-GSGSAAMED 286
Query: 478 QCPVDPLDNALCRNLSMQLPQLEQFTETIPQFQNFGEDDLQSIVQMGFGQNPNSETSLQS 537
QC + LD AL + Q F + Q ++F ED LQ+ + G Q E L
Sbjct: 287 QCSLSLLDTALPHAANPQF----AFQK---QQRDFWEDGLQNALPTGSEQR-QEEDGLLV 338
Query: 538 QSFHGSNQAPHMKAEL 553
+F G A K E
Sbjct: 339 PNFDGQLHADQTKVEF 354
>gi|194699354|gb|ACF83761.1| unknown [Zea mays]
Length = 353
Score = 207 bits (527), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 146/316 (46%), Positives = 177/316 (56%), Gaps = 32/316 (10%)
Query: 252 SQEESSVSE----QVPNDFNSRKRKAVSKGKGKETAASPSVNNTTKVAEANASESSKNKR 307
S E SSVS+ + D N RKRKA G A P K AEA + KR
Sbjct: 56 SPEGSSVSDPAWARARGDDNVRKRKAPPTGSAGGKEACPG-----KAAEAKGPD---GKR 107
Query: 308 CK------PNEGKANGNGAVKAEDE-GDDKQAKANNAKPP-EPPKDYIHVRARRGQATDS 359
C+ P + K A A E K+ K AKP EPPKDY+HVRARRGQATDS
Sbjct: 108 CRVGGSDSPVKPKVEEVAASDASVELKAQKKGKGKTAKPAVEPPKDYVHVRARRGQATDS 167
Query: 360 HSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMKLASV 419
HSLAERVRREKIS+RMK LQDLVPGCNKV GKALMLDEIINYVQSLQ+QVEFLSMKLA+V
Sbjct: 168 HSLAERVRREKISQRMKFLQDLVPGCNKVVGKALMLDEIINYVQSLQQQVEFLSMKLATV 227
Query: 420 NTRLEL-NVDALMSKDIYQPNKPLPHSIFQIDSSASAF-FSHQPQQNPALHGNISNGTMT 477
N +L+ N+ L+ KD++QP P +S+F ++S +AF F Q + G+ S
Sbjct: 228 NPQLDFSNLSTLLHKDMHQPCGPSANSVFPLESDGAAFPFCDQADLFHSF-GSGSAAMED 286
Query: 478 QCPVDPLDNALCRNLSMQLPQLEQFTETIPQFQNFGEDDLQSIVQMGFGQNPNSETSLQS 537
QC + LD AL + Q +Q ++F ED LQ+ + G Q E L
Sbjct: 287 QCSLSLLDTALPHAANPQFAFQKQ--------RDFWEDGLQNALPTGSEQR-QEEDGLLV 337
Query: 538 QSFHGSNQAPHMKAEL 553
+F G A K E
Sbjct: 338 PNFDGQLHADQTKVEF 353
>gi|356502674|ref|XP_003520142.1| PREDICTED: transcription factor bHLH49-like [Glycine max]
Length = 551
Score = 206 bits (525), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 183/485 (37%), Positives = 237/485 (48%), Gaps = 72/485 (14%)
Query: 118 NNSNNNNGSSSTNA------SCYTTPLNSPPKLNLPMSLGNSMPLNS------SVAEFSA 165
NN +NN GSSST A + L + + NSM N S+++F
Sbjct: 90 NNVHNNGGSSSTVAIRKDGFGFGRVGQDHHGTLEMGWNHANSMLPNGPVMFPHSLSQFPT 149
Query: 166 DPGFAERAARFSRFGSRSFN--------GRSTGQFVPNHNPDQFGL----SRSNNNPNPM 213
D GF ERAARFS F +F +S G + GL + + M
Sbjct: 150 DSGFIERAARFSCFSGGNFGDMVNSYGIAQSMGLYGARDAIAGHGLKSVIAGGQSQGGDM 209
Query: 214 TANEKLPRVSSSPSLKVLGSQAQATGNKSPQD-RSELANSQEESSVSEQVPNDFNSRKRK 272
E +P PS++ L A G+ D RSE ++ V N S + +
Sbjct: 210 NVVEDVP-----PSVEHL---VAAKGSPLKSDRRSEGHVIFQDEGKQSLVRNANESDRAE 261
Query: 273 AVSKGKGKETAASPSVNNTTKVAEANASESSKNKRCKPNEGKANGNGAVKAEDEG----- 327
+ G G++ SP + T+ + S K KR + NGA + EG
Sbjct: 262 SSDDGGGQDD--SPMLEGTSGEPSSKGLNSKKRKRSGRDGDNDKANGAQELPSEGAKGNS 319
Query: 328 -----DDKQ-------AKANNAK----PPEPPK-DYIHVRARRGQATDSHSLAERVRREK 370
D+Q A NAK +PPK +YIHVRARRGQAT+SHSLAERVRREK
Sbjct: 320 ENQQKGDQQPISTANKACGKNAKLGSQASDPPKEEYIHVRARRGQATNSHSLAERVRREK 379
Query: 371 ISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMKLASVNTRLELNVDAL 430
ISERMK LQDLVPGC+KVTGKA+MLDEIINYVQSLQRQVEFLSMKLA+VN RL+ N++ L
Sbjct: 380 ISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDFNIEGL 439
Query: 431 MSKDIYQPNKPLPHSI--FQIDSSASAFFSHQPQQNPALHGNISNGTMTQCPVDPLDNAL 488
++KDI Q +P P + F +D S AF P Q +H I N T + + L
Sbjct: 440 LAKDILQ-QRPDPSTALGFPLDMSM-AFPPLHPPQPGLIHPVIPNMTNSS-------DIL 490
Query: 489 CRNLSMQLPQLEQFTETIPQFQNFGEDDLQSIVQMGFGQNPNSETSLQSQSFHGSNQAPH 548
R + QL L + Q + ED+L ++VQM F + SQ G+ A
Sbjct: 491 QRTIHPQLAPLNGGFKEPNQLPDVWEDELHNVVQMSFA----TTAPPTSQDVDGTGPASQ 546
Query: 549 MKAEL 553
MK EL
Sbjct: 547 MKVEL 551
>gi|125564259|gb|EAZ09639.1| hypothetical protein OsI_31923 [Oryza sativa Indica Group]
Length = 366
Score = 205 bits (521), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 146/335 (43%), Positives = 184/335 (54%), Gaps = 73/335 (21%)
Query: 167 PGFAERAARFSRFGSRSFNGRSTGQFVPNHNPDQFGLSRSNNNPNPMTANEKLPRVSSSP 226
PGFAERAAR G+ F + G N ++ G SR ++ S P
Sbjct: 38 PGFAERAARLCGGGAGLFGLPAVG------NAERGGCSREGSS-------------VSDP 78
Query: 227 SLKVLGSQAQATGNKSPQDRSELANSQEESSVSEQVPNDFNSRKRKA-VSKGKGKETAAS 285
+ A ATG N+RKRKA S GK+ A
Sbjct: 79 AW------AHATGGGGD-----------------------NARKRKAPASAAAGKDKDAV 109
Query: 286 PSVNNT-TKVAEANASESSKNKRCK----PNEGKANGNGAVKAEDEGD--DKQAKANNAK 338
++ +V EA A +S K+CK P +A +G+V GD KQ K N+
Sbjct: 110 VGGGSSPCEVGEAKAPDS---KKCKAEVNPKVEEAASDGSV-----GDRVQKQGKGKNSS 161
Query: 339 PP--EPPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLD 396
P EPPKDY+HVRARRGQATDSHSLAERVRREKIS+RMK+LQDLVPGCNKV GKALMLD
Sbjct: 162 KPAAEPPKDYVHVRARRGQATDSHSLAERVRREKISQRMKVLQDLVPGCNKVVGKALMLD 221
Query: 397 EIINYVQSLQRQVEFLSMKLASVNTRLEL-NVDALMSKDIYQPNKPLPHSIFQIDSSASA 455
EIINYVQSLQ+QVEFLSMKLA+VN +L+ N+ L+ KD++Q P +S+F ++S+ +A
Sbjct: 222 EIINYVQSLQQQVEFLSMKLATVNPQLDFGNLSTLLQKDMFQSCGPSVNSVFPLESAGTA 281
Query: 456 F-FSHQPQQNPALHGNISNGTMT-QCPVDPLDNAL 488
F F Q + G M QC +D + AL
Sbjct: 282 FPFCDQAD----FFQSFGLGAMENQCSLDLANTAL 312
>gi|115479977|ref|NP_001063582.1| Os09g0501600 [Oryza sativa Japonica Group]
gi|113631815|dbj|BAF25496.1| Os09g0501600 [Oryza sativa Japonica Group]
gi|125606227|gb|EAZ45263.1| hypothetical protein OsJ_29905 [Oryza sativa Japonica Group]
gi|215765178|dbj|BAG86875.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 366
Score = 204 bits (520), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 146/335 (43%), Positives = 184/335 (54%), Gaps = 73/335 (21%)
Query: 167 PGFAERAARFSRFGSRSFNGRSTGQFVPNHNPDQFGLSRSNNNPNPMTANEKLPRVSSSP 226
PGFAERAAR G+ F + G N ++ G SR ++ S P
Sbjct: 38 PGFAERAARLCGGGAGLFGLPAVG------NAERGGCSREGSS-------------VSDP 78
Query: 227 SLKVLGSQAQATGNKSPQDRSELANSQEESSVSEQVPNDFNSRKRKA-VSKGKGKETAAS 285
+ A ATG N+RKRKA S GK+ A
Sbjct: 79 AW------AHATGGGGD-----------------------NARKRKAPASAAAGKDKDAV 109
Query: 286 PSVNNT-TKVAEANASESSKNKRCK----PNEGKANGNGAVKAEDEGD--DKQAKANNAK 338
++ +V EA A +S K+CK P +A +G+V GD KQ K N+
Sbjct: 110 VGGGSSPCEVGEAKAPDS---KKCKAEVNPKVEEAASDGSV-----GDRVQKQGKGKNSS 161
Query: 339 PP--EPPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLD 396
P EPPKDY+HVRARRGQATDSHSLAERVRREKIS+RMK+LQDLVPGCNKV GKALMLD
Sbjct: 162 KPAAEPPKDYVHVRARRGQATDSHSLAERVRREKISQRMKVLQDLVPGCNKVVGKALMLD 221
Query: 397 EIINYVQSLQRQVEFLSMKLASVNTRLEL-NVDALMSKDIYQPNKPLPHSIFQIDSSASA 455
EIINYVQSLQ+QVEFLSMKLA+VN +L+ N+ L+ KD++Q P +S+F ++S+ +A
Sbjct: 222 EIINYVQSLQQQVEFLSMKLATVNPQLDFGNLSTLLQKDMFQSCGPSVNSVFPLESAGTA 281
Query: 456 F-FSHQPQQNPALHGNISNGTMT-QCPVDPLDNAL 488
F F Q + G M QC +D + AL
Sbjct: 282 FPFCDQAD----FFQSFGLGAMENQCSLDLANTAL 312
>gi|302763871|ref|XP_002965357.1| hypothetical protein SELMODRAFT_439190 [Selaginella moellendorffii]
gi|300167590|gb|EFJ34195.1| hypothetical protein SELMODRAFT_439190 [Selaginella moellendorffii]
Length = 730
Score = 204 bits (519), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 141/321 (43%), Positives = 185/321 (57%), Gaps = 35/321 (10%)
Query: 218 KLPRVSSSPSLKVLGSQAQATGNKSPQDRSELANSQEESSVSEQVPNDFNSRKRKAVSKG 277
KLP V + KV S +G KS Q+ S+ + +E + RKR+ +S+
Sbjct: 255 KLPVVET----KVEASVDDTSGAKSAQETSQASIVKESTG-----------RKRRTLSED 299
Query: 278 KGKETAASPSVNNTTKVAEANASESSKNKRCKPNEGKANGNGAVKAEDEGDDK------Q 331
K K+ +S ++ K E + +N K E K +GNG KA+ D +
Sbjct: 300 KLKD-GSSCVTSSGIKDGEQVKGKRQRNPNAK-EESKQHGNG--KADRSSSDNSGSTSPK 355
Query: 332 AKANNAKPPEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGK 391
+ N KPPEPPKDYIHVRARRGQATDSHSLAERVRREKISERMK LQDLVPGCNKVTGK
Sbjct: 356 SVKENTKPPEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGK 415
Query: 392 ALMLDEIINYVQSLQRQVEFLSMKLASVNTRLELNVDALMSKDIYQPNKPLPHSIFQIDS 451
A+MLDEIINYVQSLQRQVEFLSMKLA+VN RLE NV++L+ K++ P+ + F +
Sbjct: 416 AVMLDEIINYVQSLQRQVEFLSMKLAAVNPRLEFNVESLLGKEV--PHGRASPTNFVLGP 473
Query: 452 SASAFFSHQPQQNPALHGNISNGTMTQCPVDPLDNALCRNLSMQLPQLEQFTETIPQFQN 511
+ + HQ Q + T+T L R + P L+ +++ Q +
Sbjct: 474 QSYSQQLHQAQHSALQLAGFDLRTLT-----GLQEVAMRRGA--FPCLDPYSDPASQTSS 526
Query: 512 FGEDDLQSIVQ-MGFGQNPNS 531
+ +LQ+IV MGF +N S
Sbjct: 527 VWDGELQNIVHMMGFVENGQS 547
>gi|357159196|ref|XP_003578371.1| PREDICTED: transcription factor bHLH49-like [Brachypodium
distachyon]
Length = 372
Score = 202 bits (515), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 125/256 (48%), Positives = 161/256 (62%), Gaps = 23/256 (8%)
Query: 250 ANSQEESSVSEQV------PNDFNSRKRKAVSKGKGKETAASPSVNNTTKVAEANASESS 303
A S+E SSVS+ P+ N++KRKA + GK A+ + KV EA ES
Sbjct: 66 AASREGSSVSDPAWASYARPDGANAKKRKAPAGASGKGKEAAAAAACFGKVGEATGPESK 125
Query: 304 KNKR----CKPNEGKANGNGAVKAEDEGDDKQAKANNAKPP----EPPKDYIHVRARRGQ 355
K K KP + +G+ E KQAK ++K EPP+DY+HVRARRGQ
Sbjct: 126 KCKVEVAPVKPKVEETASDGSAGGER--GRKQAKGKSSKSKQADDEPPRDYVHVRARRGQ 183
Query: 356 ATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMK 415
ATDSHSLAERVRREKI+ +MK+LQDLVPGCNKV GKALMLDEIINYVQSLQ+QVEFLSMK
Sbjct: 184 ATDSHSLAERVRREKITIKMKMLQDLVPGCNKVIGKALMLDEIINYVQSLQQQVEFLSMK 243
Query: 416 LASVNTRLELN-VDALMSKDIYQPNKPLPHSIFQIDSSASAF-FSHQPQQNPALHGNISN 473
LA+VN +L+ + + L+ KD+ + P P S+F ++S+ AF F Q + + +
Sbjct: 244 LATVNPQLDFSTLSTLLHKDMNEAFGPSPSSVFPLESAGGAFPFYEQAD----IFQSFGS 299
Query: 474 GTMT-QCPVDPLDNAL 488
G+M QCP+ LD L
Sbjct: 300 GSMENQCPLGLLDTVL 315
>gi|294462520|gb|ADE76806.1| unknown [Picea sitchensis]
Length = 392
Score = 202 bits (514), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 131/287 (45%), Positives = 167/287 (58%), Gaps = 33/287 (11%)
Query: 252 SQEESSVSEQVPNDFNSRKRKAVSKGKGK---ETAASPSVNNTTKVAEANASESSKNKRC 308
S EE S SEQ RKR+ + K + T SPS E N SK+KR
Sbjct: 122 SGEECSSSEQ---STGGRKRRTLPNDKARFHDSTFTSPS--------EKNTENESKSKRP 170
Query: 309 KPNEG-KANGNGAVKAEDEGDDKQAKAN------NAKPPEPPKDYIHVRARRGQATDSHS 361
K E K N + AE + + N +AKPPEPPKDYIHVRARRGQATD HS
Sbjct: 171 KSAEAMKENDDSKSDAEQRTHTGRPEVNPRQSEQSAKPPEPPKDYIHVRARRGQATDRHS 230
Query: 362 LAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMKLASVNT 421
LAERVRREKI ERMKLLQDLVPGCNK+TGKA+M+DEIINYVQSLQ QVEFLSMKL +VN
Sbjct: 231 LAERVRREKIGERMKLLQDLVPGCNKITGKAVMVDEIINYVQSLQCQVEFLSMKLEAVNP 290
Query: 422 RLELNVDALMSKDIYQPNKPLPHSIFQIDSSASAFFSHQPQQNPALHGNISNGTMTQCPV 481
+L N++ +++D+ +P+ F + F HQP+ A+ S QC
Sbjct: 291 KLACNMEGFLARDMLEPS-------FNTAKAYPQF--HQPEW-LAMQVGTSCEMEEQCMG 340
Query: 482 DPLDNALCRNLSMQLPQLEQFTETIPQFQNFGEDDLQSIVQMGFGQN 528
+ AL R ++ P +E + + N +D+LQ++V++G GQN
Sbjct: 341 NARQVALRRIMNENSPLIEGCGDA--KISNVWDDELQNVVRLGVGQN 385
>gi|449493518|ref|XP_004159328.1| PREDICTED: transcription factor bHLH49-like [Cucumis sativus]
Length = 517
Score = 202 bits (513), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 148/373 (39%), Positives = 195/373 (52%), Gaps = 32/373 (8%)
Query: 159 SVAEFSADPGFAERAARFSRFGSRSFNGRSTGQFVPNHNPDQFGLSRSNNNPNPMTANEK 218
S+++ AD F ERAAR S F +F G G F + PD G+ P +E
Sbjct: 149 SLSQLPADSSFIERAARLSCFSGGNFGG-DVGHF---NVPDPVGVFSRGMGVIPERWDE- 203
Query: 219 LPRVSSSPSLKVLG-SQAQATGNKSPQDRSELAN--SQEESSVSEQVPNDFNSRKRKAVS 275
+PR + G SQ ++S R + E++ E +RKRK
Sbjct: 204 IPRNGLGLASGTGGQSQRNVVNSESSMPRGDGLGEPCTLEATGKELSTKGLGTRKRKRSG 263
Query: 276 KGKGKETAASPSVNNTTKVAEANASESSKNKRCKPNEGKANGNGAVKAEDEGDDKQAKAN 335
+ + A P T V+ + +E+ + + PN G G KQA
Sbjct: 264 QKTELDQANGPL--QQTTVSPKDDAETQRKRDQNPNSTANKGTGK-------HGKQA--- 311
Query: 336 NAKPPEPPKD-YIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALM 394
++P +PPK+ YIHVRARRGQAT+SHSLAERVRREKISERMK LQ+LVPGC+KVTGKA+M
Sbjct: 312 -SQPSDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQELVPGCSKVTGKAVM 370
Query: 395 LDEIINYVQSLQRQVEFLSMKLASVNTRLELNVDALMSKDIYQPN-KPLPHSIFQIDSSA 453
LDEIINYVQSLQRQVEFLSMKLA+VN RL++N+D +++KDI Q PL S
Sbjct: 371 LDEIINYVQSLQRQVEFLSMKLATVNPRLDINIDGVVAKDILQSRVGPL---------ST 421
Query: 454 SAFFSHQPQQNPALHGNISNGTMTQCPVDPLDNALCRNLSMQLPQLEQFTETIPQFQNFG 513
F SH P P H + T P L ++ + + Q +N
Sbjct: 422 LGFSSHMPVACPPPHISHHELIPTSFPAIGSSEMLRSTMNSHMTPRSGGFKNPSQIKNVW 481
Query: 514 EDDLQSIVQMGFG 526
E +LQ++VQM FG
Sbjct: 482 EGELQNLVQMSFG 494
>gi|223950211|gb|ACN29189.1| unknown [Zea mays]
gi|414869585|tpg|DAA48142.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 401
Score = 200 bits (509), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 165/418 (39%), Positives = 203/418 (48%), Gaps = 80/418 (19%)
Query: 163 FSADPGFAERAARFSRFGSRSFNGRSTGQFVPNHNPDQFGLSRSNNNPNPMTANEKLPRV 222
F DPGFA RAAR S F + F + FGL P P+ A
Sbjct: 36 FCGDPGFAARAARLSSFSGQRFAVTAG----------LFGL------PPPLPA------- 72
Query: 223 SSSPSLKVLGSQAQATGNKSPQDRSELANSQEESSVSE------QVPNDFNSRKRKAVSK 276
A+G E A S+E SSVS+ A +K
Sbjct: 73 --------------ASGG------GEFAGSREASSVSDPASAMKDANAKKRKAPAAAAAK 112
Query: 277 GKGKETAA--------SPSVNNTTKVAEANASESSKNKRCKPNEGKANGNGAVKAEDEGD 328
GKG+E +A P K E S K KP + ++ + ED G
Sbjct: 113 GKGREPSAQAQAGEPKGPDAKRCCKAEGGEGEEGSPVKLPKPEQAGSDSS----VEDGGA 168
Query: 329 DKQ-----AKANNAKPPEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVP 383
Q K NAKP EPP+DY+HVRARRGQATDSHSLAERVRRE+IS+RMK+LQDLVP
Sbjct: 169 QNQKPPPPVKGKNAKPVEPPRDYVHVRARRGQATDSHSLAERVRRERISQRMKVLQDLVP 228
Query: 384 GCNKVTGKALMLDEIINYVQSLQRQVEFLSMKLASVNTRLELNVDALMSKDIYQPNKPLP 443
GCNKV GKALMLDEIINYVQSLQRQVEFLSMKLA+VN N+ L+ KD +
Sbjct: 229 GCNKVIGKALMLDEIINYVQSLQRQVEFLSMKLATVNPLDLSNLPTLLQKDACGASA--- 285
Query: 444 HSIFQIDSSASAF-FSHQPQQNPALHGNISNGTMTQC-PVDPLDNALCRNLSMQLPQLEQ 501
S+F ++S + F F Q + NG C ++PLD AL + Q +
Sbjct: 286 SSVFSLESCSPGFPFGG---QGDVFQSFVPNGLENPCGGLNPLDLALSQATGGQFGFQDG 342
Query: 502 FTETIPQFQNFG---EDDLQSIVQMGF-GQNPNSETSLQSQSFHG--SNQAPHMKAEL 553
T Q +N+ E+DLQS+ + GQ+ S +QSFHG Q HMK E
Sbjct: 343 TAGTNLQQRNYWEEEEEDLQSVFHIDDNGQSQEHGASASAQSFHGQLQPQEGHMKMEF 400
>gi|255547017|ref|XP_002514566.1| conserved hypothetical protein [Ricinus communis]
gi|223546170|gb|EEF47672.1| conserved hypothetical protein [Ricinus communis]
Length = 566
Score = 199 bits (507), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 161/440 (36%), Positives = 219/440 (49%), Gaps = 62/440 (14%)
Query: 156 LNSSVAEFSADPGFAERAARFSRFGSRSFNGRSTGQFVPNHNPDQFGL-SRSNN---NPN 211
L S+++F AD F ERAARFS F +F + P P+ GL SRS P
Sbjct: 147 LPQSLSQFPADSAFIERAARFSCFNGGNF----SDMMNPFGIPESMGLYSRSGGMMQGPQ 202
Query: 212 PMTANEKLPRVSSSPS---LKVLGSQAQATGN-----------KSPQDRSELANSQEESS 257
+ A L V+ + ++G ++ K+ + L S +E+
Sbjct: 203 EVFAASGLKTVTGGQGQNNVTIVGETSKDASMSIEHVAIEGPLKNERKSDSLVRSNDEAK 262
Query: 258 VSEQVPNDFNSRKRKAVSKGKGKETAASPSVNNTTKVAEANASESSKNKRCKPNEGKANG 317
D + S G G+E A++ N A++ + K +A G
Sbjct: 263 QGAGGSGD--ESEEAEFSGGGGQEEASTLEGNGMELSAKSLGLKKRKRNGQDIELDQAKG 320
Query: 318 N--------GAVKAEDEGDD-----------KQAKANNAKPPEPPKDYIHVRARRGQATD 358
N V+A+ +GD KQ K + P ++YIHVRARRGQAT+
Sbjct: 321 NLQSVEAAKDNVEAQQKGDQTPTSTPNKTSGKQGKQGSQASDPPKEEYIHVRARRGQATN 380
Query: 359 SHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMKLAS 418
SHSLAERVRREKISERMK LQDLVPGC+KVTGKA+MLDEIINYVQSLQRQVEFLSMKLA+
Sbjct: 381 SHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLAT 440
Query: 419 VNTRLELNVDALMSKDIYQPNKPLPHSIFQIDSSASAFFSHQPQQNPALHGNISNGTMTQ 478
VN RL+ N++ L++KDI ++ +P SS AF P N S + Q
Sbjct: 441 VNPRLDFNIEGLLAKDILH-SRAVP-------SSTLAFSPDMIMAYPPF--NTSQPGLIQ 490
Query: 479 CPVDPLD---NALCRNLSMQLPQLEQFTETIPQFQNFGEDDLQSIVQMGFGQNPNSETSL 535
++ + L R +S QL L + Q N +D+L ++VQMG+G + T+
Sbjct: 491 ASFPGMESHSDVLRRTISSQLTPLSGVFKEPTQLPNAWDDELHNVVQMGYG----TGTTQ 546
Query: 536 QSQSFHGSN--QAPHMKAEL 553
SQ + + A MKAEL
Sbjct: 547 DSQDVNAGSLPAAGQMKAEL 566
>gi|116787273|gb|ABK24441.1| unknown [Picea sitchensis]
Length = 320
Score = 199 bits (507), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 114/225 (50%), Positives = 146/225 (64%), Gaps = 14/225 (6%)
Query: 334 ANNAKPPEP--PKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGK 391
+NAKP +DYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGK
Sbjct: 105 VDNAKPSSVSVKQDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGK 164
Query: 392 ALMLDEIINYVQSLQRQVEFLSMKLASVNTRLELNVD-ALMSKDIYQPNKPLPHSIFQID 450
A+MLDEIINYVQ+LQ QVEFLSMKLA+VN +L+ NV+ +++D+ QP+ +F D
Sbjct: 165 AVMLDEIINYVQALQCQVEFLSMKLAAVNPQLDCNVEGGYLTRDVLQPHCSSISKMFAPD 224
Query: 451 SSASAFFSHQPQQNPALHGNISNGTMTQCPVDPLDNALCRNLSMQLPQLEQFTETIPQFQ 510
++A+A +Q Q+ P HG QC D + A+ + Q + + + Q Q
Sbjct: 225 TTAAASQINQLQKTPLQHG-------LQCRADRQELAIRGMMDTQFTCMNGYADPTFQLQ 277
Query: 511 --NFGEDDLQSIVQMGFGQNPNSETSLQSQSFHGSNQAPHMKAEL 553
+D+ Q+ V +G QN ++ L+S FHG HMK EL
Sbjct: 278 MSQGWDDEFQNAVDIGLDQNRSN--PLKSHGFHGVLPTGHMKVEL 320
>gi|449434704|ref|XP_004135136.1| PREDICTED: transcription factor bHLH49-like [Cucumis sativus]
Length = 561
Score = 198 bits (504), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 157/417 (37%), Positives = 206/417 (49%), Gaps = 76/417 (18%)
Query: 159 SVAEFSADPGFAERAARFSRFGSRSFNGRSTGQFVPNHNPDQFGLSRSNNNPNPMTANEK 218
S+++ AD F ERAAR S F +F G G F + PD G+ P +E
Sbjct: 149 SLSQLPADSSFIERAARLSCFSGGNFGG-DVGHF---NVPDPVGVFSRGMGVIPERWDE- 203
Query: 219 LPR-----------------VSSSPSLKV-LGSQAQATGNKSPQDRSEL----------- 249
+PR V+S S+ V L ++ AT SP++ S L
Sbjct: 204 IPRNGLGLASGTGGQSQRNVVNSESSMPVCLTNEHGATERDSPKNGSPLKLDGRGKLAVD 263
Query: 250 --ANSQEESSVS----------------EQVPNDFNSRKRKAVSKGKGKETAASPSVNNT 291
AN +E+ S E +RKRK + + A P
Sbjct: 264 GSANESDEAECSGGDGLGEPCTLEATGKELSTKGLGTRKRKRSGQKTELDQANGPL--QQ 321
Query: 292 TKVAEANASESSKNKRCKPNEGKANGNGAVKAEDEGDDKQAKANNAKPPEPPKD-YIHVR 350
T V+ + +E+ + + PN G G KQA ++P +PPK+ YIHVR
Sbjct: 322 TTVSPKDDAETQRKRDQNPNSTANKGTGK-------HGKQA----SQPSDPPKEEYIHVR 370
Query: 351 ARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVE 410
ARRGQAT+SHSLAERVRREKISERMK LQ+LVPGC+KVTGKA+MLDEIINYVQSLQRQVE
Sbjct: 371 ARRGQATNSHSLAERVRREKISERMKFLQELVPGCSKVTGKAVMLDEIINYVQSLQRQVE 430
Query: 411 FLSMKLASVNTRLELNVDALMSKDIYQPN-KPLPHSIFQIDSSASAFFSHQPQQNPALHG 469
FLSMKLA+VN RL++N+D +++KDI Q PL S F SH P P H
Sbjct: 431 FLSMKLATVNPRLDINIDGVVAKDILQSRVGPL---------STLGFSSHMPVACPPPHI 481
Query: 470 NISNGTMTQCPVDPLDNALCRNLSMQLPQLEQFTETIPQFQNFGEDDLQSIVQMGFG 526
+ T P L ++ + + Q +N E +LQ++VQM FG
Sbjct: 482 SHHELIPTSFPAIGSSEMLRSTMNSHMTPRSGGFKNPSQIKNVWEGELQNLVQMSFG 538
>gi|118486023|gb|ABK94855.1| unknown [Populus trichocarpa]
Length = 348
Score = 196 bits (498), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 115/231 (49%), Positives = 149/231 (64%), Gaps = 20/231 (8%)
Query: 330 KQAKANNAKPPEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVT 389
KQ K + +P ++YIHVRARRGQAT+SHSLAERVRREKISERMK LQDLVPGC+KVT
Sbjct: 131 KQGKQGSLGSDQPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVT 190
Query: 390 GKALMLDEIINYVQSLQRQVEFLSMKLASVNTRLELNVDALMSKDIYQPNKPLPHSIFQI 449
GKA+MLDEIINYVQSLQRQVEFLSMKLA+VN RL+LN++ L++KD++ P I Q+
Sbjct: 191 GKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDLNIEGLLAKDVFDPK------ILQL 244
Query: 450 DS---SASAFFSHQPQQNPALHGNISNGTMTQCP-VDPLDNALCRNLSMQL-PQLEQFTE 504
+ S+ AF P P H + + T P ++ + +CR ++ QL P F E
Sbjct: 245 HAVPPSSLAFSLEMPMAYPPSHPSQAGLIPTAFPGMNNHSDIICRTINSQLTPMTAGFKE 304
Query: 505 TIPQFQNFGEDDLQSIVQMGFGQNPNSETSLQSQSFHGSNQAP--HMKAEL 553
Q N +D+L+++VQM + ETS S + P H+K EL
Sbjct: 305 PA-QLPNVWDDELRNVVQMSY------ETSAPHDSQDVNKPLPPGHLKVEL 348
>gi|79320926|ref|NP_001031255.1| transcription factor bHLH49 [Arabidopsis thaliana]
gi|227204401|dbj|BAH57052.1| AT1G68920 [Arabidopsis thaliana]
gi|332196742|gb|AEE34863.1| transcription factor bHLH49 [Arabidopsis thaliana]
Length = 485
Score = 196 bits (498), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 153/408 (37%), Positives = 201/408 (49%), Gaps = 73/408 (17%)
Query: 141 PPKLNLPMSLGNSMPLNSSVAEFSADPGFAERAARFSRFGSRSF---------NGRSTGQ 191
PPK N S L S+A+F AD GF ERAARFS F +F N + G
Sbjct: 104 PPKGNGLFLPNASSFLPPSMAQFPADSGFIERAARFSLFSGGNFSDMVNQPLGNSEAIGL 163
Query: 192 FVPNHNPDQFGLSRSNNNPNPMTANEKLPRVSSSPSLKVLGSQAQA------TGNKSPQD 245
F+ G + N + E VS + + S QA +GN S
Sbjct: 164 FLQGG-----GTMQGQCQSNELNVGEPHNDVSVAVKESTVRSSEQAKPNVPGSGNVSEDT 218
Query: 246 RSELANSQEESSVSEQVPNDFNSRKRKAVSKGKGKETAASPSVNNTTKVAEANASESSKN 305
+S N Q+ S N++KRK G+ E A S + + + N E +
Sbjct: 219 QSSGGNGQKGRETSS------NTKKRK--RNGQNSEAAQSHRSQQSEEEPDNNGDEKRND 270
Query: 306 KRCKPNEGKANGNGAVKAEDEGDDKQAKANNAKPPEPPKD-YIHVRARRGQATDSHSLAE 364
++ + GK + +G + + D PPKD YIHVRARRGQAT+SHSLAE
Sbjct: 271 EQSPNSPGKKSNSGKQQGKQSSD-------------PPKDGYIHVRARRGQATNSHSLAE 317
Query: 365 RVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMKLASVNTRLE 424
RVRREKISERMK LQDLVPGCNKVTGKA+MLDEIINYVQSLQRQVEFLSMKLA+VN +++
Sbjct: 318 RVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPQMD 377
Query: 425 LNVDALMSKDIYQPNKPLPHSIFQIDSSASAFFSHQPQQNPAL-HGNI-----SNGTMTQ 478
N++ L++KD Q + SS + F + P L HG + S G
Sbjct: 378 FNLEGLLAKDALQ--------LRAGSSSTTPFPPNMSMAYPPLPHGFMQQTLSSIGRTIT 429
Query: 479 CPVDPLDNALCRNLSMQLPQLEQFTETIPQFQNFGEDDLQSIVQMGFG 526
P+ P++ R Q N E DLQ+++ + +G
Sbjct: 430 SPLSPMNGGFKR-----------------QETNGWEGDLQNVIHINYG 460
>gi|20127044|gb|AAM10942.1|AF488584_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 486
Score = 195 bits (495), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 153/408 (37%), Positives = 200/408 (49%), Gaps = 72/408 (17%)
Query: 141 PPKLNLPMSLGNSMPLNSSVAEFSADPGFAERAARFSRFGSRSF---------NGRSTGQ 191
PPK N S L S+A+F AD GF ERAARFS F +F N + G
Sbjct: 104 PPKGNGLFLPNASSFLPPSMAQFPADSGFIERAARFSLFSGGNFSDMVNQPLGNSEAIGL 163
Query: 192 FVPNHNPDQFGLSRSNNNPNPMTANEKLPRVSSSPSLKVLGSQAQA------TGNKSPQD 245
F+ G N + E VS + + S QA +GN S
Sbjct: 164 FLQGG-----GTMHGQCQSNELNVGEPHNDVSVAVKESTVRSSEQAEPNVPGSGNVSEDT 218
Query: 246 RSELANSQEESSVSEQVPNDFNSRKRKAVSKGKGKETAASPSVNNTTKVAEANASESSKN 305
+S N Q+ S N++KRK + K E A S + + + N E +
Sbjct: 219 QSSGGNGQKGRETSS------NTKKRKRNGQ-KNSEAAQSHRSQQSEEEPDNNGDEKRND 271
Query: 306 KRCKPNEGKANGNGAVKAEDEGDDKQAKANNAKPPEPPKD-YIHVRARRGQATDSHSLAE 364
++ + GK + +G + + D PPKD YIHVRARRGQAT+SHSLAE
Sbjct: 272 EQSPNSPGKKSNSGKQQGKQSSD-------------PPKDGYIHVRARRGQATNSHSLAE 318
Query: 365 RVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMKLASVNTRLE 424
RVRREKISERMK LQDLVPGCNKVTGKA+MLDEIINYVQSLQRQVEFLSMKLA+VN +++
Sbjct: 319 RVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPQMD 378
Query: 425 LNVDALMSKDIYQPNKPLPHSIFQIDSSASAFFSHQPQQNPAL-HGNI-----SNGTMTQ 478
N++ L++KD Q + SS + F + P L HG + S G
Sbjct: 379 FNLEGLLAKDALQ--------LRAGSSSTTPFPPNMSMSYPPLPHGFMQQTLSSIGRTIT 430
Query: 479 CPVDPLDNALCRNLSMQLPQLEQFTETIPQFQNFGEDDLQSIVQMGFG 526
P+ P++ R Q N E DLQ+++ + +G
Sbjct: 431 SPLSPMNGGFKR-----------------QETNGWEGDLQNVIHINYG 461
>gi|15221563|ref|NP_177058.1| transcription factor bHLH49 [Arabidopsis thaliana]
gi|79590003|ref|NP_849863.2| transcription factor bHLH49 [Arabidopsis thaliana]
gi|75333634|sp|Q9CAA9.1|BH049_ARATH RecName: Full=Transcription factor bHLH49; AltName: Full=Basic
helix-loop-helix protein 49; Short=AtbHLH49; Short=bHLH
49; AltName: Full=Transcription factor EN 82; AltName:
Full=bHLH transcription factor bHLH049
gi|12323211|gb|AAG51583.1|AC011665_4 putative DNA-binding protein [Arabidopsis thaliana]
gi|22135841|gb|AAM91106.1| At1g68920/T6L1_10 [Arabidopsis thaliana]
gi|25090290|gb|AAN72270.1| At1g68920/T6L1_10 [Arabidopsis thaliana]
gi|332196740|gb|AEE34861.1| transcription factor bHLH49 [Arabidopsis thaliana]
gi|332196741|gb|AEE34862.1| transcription factor bHLH49 [Arabidopsis thaliana]
Length = 486
Score = 195 bits (495), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 153/408 (37%), Positives = 201/408 (49%), Gaps = 72/408 (17%)
Query: 141 PPKLNLPMSLGNSMPLNSSVAEFSADPGFAERAARFSRFGSRSF---------NGRSTGQ 191
PPK N S L S+A+F AD GF ERAARFS F +F N + G
Sbjct: 104 PPKGNGLFLPNASSFLPPSMAQFPADSGFIERAARFSLFSGGNFSDMVNQPLGNSEAIGL 163
Query: 192 FVPNHNPDQFGLSRSNNNPNPMTANEKLPRVSSSPSLKVLGSQAQA------TGNKSPQD 245
F+ G + N + E VS + + S QA +GN S
Sbjct: 164 FLQGG-----GTMQGQCQSNELNVGEPHNDVSVAVKESTVRSSEQAKPNVPGSGNVSEDT 218
Query: 246 RSELANSQEESSVSEQVPNDFNSRKRKAVSKGKGKETAASPSVNNTTKVAEANASESSKN 305
+S N Q+ S N++KRK + K E A S + + + N E +
Sbjct: 219 QSSGGNGQKGRETSS------NTKKRKRNGQ-KNSEAAQSHRSQQSEEEPDNNGDEKRND 271
Query: 306 KRCKPNEGKANGNGAVKAEDEGDDKQAKANNAKPPEPPKD-YIHVRARRGQATDSHSLAE 364
++ + GK + +G + + D PPKD YIHVRARRGQAT+SHSLAE
Sbjct: 272 EQSPNSPGKKSNSGKQQGKQSSD-------------PPKDGYIHVRARRGQATNSHSLAE 318
Query: 365 RVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMKLASVNTRLE 424
RVRREKISERMK LQDLVPGCNKVTGKA+MLDEIINYVQSLQRQVEFLSMKLA+VN +++
Sbjct: 319 RVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPQMD 378
Query: 425 LNVDALMSKDIYQPNKPLPHSIFQIDSSASAFFSHQPQQNPAL-HGNI-----SNGTMTQ 478
N++ L++KD Q + SS + F + P L HG + S G
Sbjct: 379 FNLEGLLAKDALQ--------LRAGSSSTTPFPPNMSMAYPPLPHGFMQQTLSSIGRTIT 430
Query: 479 CPVDPLDNALCRNLSMQLPQLEQFTETIPQFQNFGEDDLQSIVQMGFG 526
P+ P++ R Q N E DLQ+++ + +G
Sbjct: 431 SPLSPMNGGFKR-----------------QETNGWEGDLQNVIHINYG 461
>gi|356538777|ref|XP_003537877.1| PREDICTED: transcription factor bHLH49-like [Glycine max]
Length = 420
Score = 193 bits (490), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 123/268 (45%), Positives = 159/268 (59%), Gaps = 17/268 (6%)
Query: 295 AEANASESSKNKRCKPNEGKANGNGAVKAEDEGDD-KQAKANNAKPPEPPKDYIHVRARR 353
E+ +E + NK K N K N AE D+ K ++ N KP +YIHVRARR
Sbjct: 161 GESKVTEQTSNKNGKSNANKNNNRETTSAETSKDNSKGSEVQNQKP-----EYIHVRARR 215
Query: 354 GQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLS 413
GQATDSHSLAERVRREKISERMK LQDLVPGCNKV GKA MLDEIINYVQSLQRQVEFLS
Sbjct: 216 GQATDSHSLAERVRREKISERMKYLQDLVPGCNKVAGKAGMLDEIINYVQSLQRQVEFLS 275
Query: 414 MKLASVNTRLELNVDALMSKDIY-QPNKPLPHSIFQIDSSASAFFSHQPQQNPALHGNIS 472
MKLA+VN RL+ N+D L +K+++ + P+ +D S S S+ P + +
Sbjct: 276 MKLAAVNPRLDFNLDELFTKEVFPSCAQSFPNIGMPLDMSMSNNPSYLPFNSAQQLVSCC 335
Query: 473 NGTMTQCPVDPLDNALCRNLS---MQLPQL----EQFTETIPQFQNFGEDDLQSIVQMGF 525
G + + P + L RN+S + LP+ FT+ +P N+ D QS+ + F
Sbjct: 336 GGLINNMGISPPNMGLRRNISTSPVPLPETFLDSSCFTQILPS-SNWEGGDFQSLYNVAF 394
Query: 526 GQNPNSETSLQSQSFHGSNQAPHMKAEL 553
Q + S SQ F G +A ++K E+
Sbjct: 395 DQGRTA--SFPSQPFTGLVEASNLKMEM 420
>gi|302790872|ref|XP_002977203.1| hypothetical protein SELMODRAFT_106386 [Selaginella moellendorffii]
gi|300155179|gb|EFJ21812.1| hypothetical protein SELMODRAFT_106386 [Selaginella moellendorffii]
Length = 158
Score = 192 bits (487), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 102/154 (66%), Positives = 115/154 (74%), Gaps = 8/154 (5%)
Query: 301 ESSKNKRCK-PN---EGKANGNGAVKAEDEGDDK----QAKANNAKPPEPPKDYIHVRAR 352
E K KR + PN E K +GNG + ++ N KPPEPPKDYIHVRAR
Sbjct: 2 EQVKGKRQRNPNAKEESKQHGNGKADRSSSDNSGSTSPKSVKENTKPPEPPKDYIHVRAR 61
Query: 353 RGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFL 412
RGQATDSHSLAERVRREKISERMK LQDLVPGCNKVTGKA+MLDEIINYVQSLQRQVEFL
Sbjct: 62 RGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFL 121
Query: 413 SMKLASVNTRLELNVDALMSKDIYQPNKPLPHSI 446
SMKLA+VN RLE NV++L+ K++ K L S+
Sbjct: 122 SMKLAAVNPRLEFNVESLLGKEVRTLLKILFFSV 155
>gi|449440736|ref|XP_004138140.1| PREDICTED: transcription factor bHLH79-like [Cucumis sativus]
gi|449477343|ref|XP_004154996.1| PREDICTED: transcription factor bHLH79-like [Cucumis sativus]
Length = 276
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 117/227 (51%), Positives = 146/227 (64%), Gaps = 19/227 (8%)
Query: 252 SQEESSVSEQVPNDFNSRKRKAVSKGKGKETAASPSVNNTTKVAEANASESSKNKRCKPN 311
S EES+V+EQ RKRK VS E +S V+ ++ AN +S +KR K
Sbjct: 60 SMEESTVTEQ---SGGGRKRKDVSS----EDESSRMVSTSS----ANQLSNSNDKRMKVV 108
Query: 312 EGKANGNGAVKAEDE--GDDKQAKANNAKPPEPPKDYIHVRARRGQATDSHSLAERVRRE 369
E + + NG +KAE + D + A + PEPPKDYIHVRARRGQATDSHSLAER RRE
Sbjct: 109 ESR-DENGGIKAEVDPNSSDGKKLAEQSPKPEPPKDYIHVRARRGQATDSHSLAERARRE 167
Query: 370 KISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMKLASVNTRLEL--NV 427
KISERMK+LQDLVPGCNKV GKAL+LDEIINY+QSLQRQVEFLSMKL +VN+R+ + +
Sbjct: 168 KISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNITPGI 227
Query: 428 DALMSKDIYQPNKPLPHSIFQIDSSASAFFSHQPQQNPALHGNISNG 474
+ K+I N+P + S A+ ++ Q Q LH I G
Sbjct: 228 EGFTVKNIV--NQPYDAAGILYGSQAARDYT-QGAQTEWLHMQIGGG 271
>gi|449518045|ref|XP_004166054.1| PREDICTED: transcription factor bHLH49-like [Cucumis sativus]
Length = 533
Score = 190 bits (483), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 156/429 (36%), Positives = 207/429 (48%), Gaps = 73/429 (17%)
Query: 160 VAEFSADPGFAERAARFSRFGSRSFNGRSTGQF-----VPNHNPDQFG---------LSR 205
+++ AD F ERAARFS F + F G F + H+ FG +S+
Sbjct: 143 LSQLPADSAFIERAARFSCFNNGVFGAPPAGPFGISDSLGIHSGGGFGRQEVISRNGVSK 202
Query: 206 SNNNPNPMTANEKLPRVSSSPSLKVLGSQAQATGNKSPQDRSE--LANSQEESSVSEQVP 263
+ P + A EK P + S Q +S D E + Q+E
Sbjct: 203 DVSLPMELEAEEKSPPKNEKDSEMSQDRAKQGCVGESGNDSDEAGFSGGQDEQCTMGGTM 262
Query: 264 ND-------FNSRKRKAVSKGKGKETAASPSVNNTTKVAEANASESSKNKRCKPNEGKAN 316
+ F RKR + G G+ A +N T K N + +N P+ +
Sbjct: 263 TEPSTEGLCFKKRKRGEQNVGLGQVKEAPQQINETAKNGAFNQQKGGQN----PSSTTSK 318
Query: 317 GNGAVKAEDEGDDKQAKANNAKPPEPPKDYIHVRARRGQATDSHSLAERVRREKISERMK 376
G KQ K ++ P ++YIHVRARRGQAT+SHSLAERVRREKISERM+
Sbjct: 319 PAG----------KQGKQDSQPSDAPKEEYIHVRARRGQATNSHSLAERVRREKISERMR 368
Query: 377 LLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMKLASVNTRLELNVDALMSKDIY 436
LLQDLVPGC+KVTGKA+MLDEIINYVQSLQRQVEFLSMKLA+VN RL+ N++ L++K+
Sbjct: 369 LLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDFNIEELLTKEFI 428
Query: 437 Q-----------PNKPLPHSIFQIDSSASAFFSHQPQQNPALHGNISNGTMTQCPVDPLD 485
Q P+ P+P+ SH P L TM P
Sbjct: 429 QSKAGPSLFGFPPDMPVPY--------LPQHSSHHGLIPPCLP------TMGSSP----- 469
Query: 486 NALCRNLSMQLPQL-EQFTETIPQFQNFGEDDLQSIVQMGFGQNPNSETSLQSQSFHGSN 544
+ L R ++ QL L F E + Q N E++L ++V M F + S Q GSN
Sbjct: 470 DLLRRTINSQLTSLVGGFKEPV-QLPNRWENELHNVVPMNFDVSAPSS----GQDVDGSN 524
Query: 545 QAPHMKAEL 553
+ +AEL
Sbjct: 525 PQCNTRAEL 533
>gi|388504626|gb|AFK40379.1| unknown [Medicago truncatula]
Length = 397
Score = 188 bits (477), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 127/291 (43%), Positives = 162/291 (55%), Gaps = 27/291 (9%)
Query: 280 KETAASPSVNNTTKVAEANASESSKNKRCK----PNEGKANGNGAVKAEDEGDDKQAKAN 335
K A N+ KV +K+KR K E K GN K +D
Sbjct: 117 KRKAEKSHHNSKLKVVVGEIEIENKDKRIKIGSEDGESKITGNPNTKKNCVAEDTSNSKE 176
Query: 336 NAKPPEPPK-DYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALM 394
N+K + K DYIHVRARRGQATDSHSLAERVRREKISERMK LQDLVPGCNK+TGKA M
Sbjct: 177 NSKVSDVQKTDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGM 236
Query: 395 LDEIINYVQSLQRQVEFLSMKLASVNTRLELNVDALMSKDIYQPNKPLPHSIFQIDSSAS 454
LDEIINYVQSLQ+QVEFLSMKLA+VN RL+ N+D L K+++ PN S FQ ++
Sbjct: 237 LDEIINYVQSLQKQVEFLSMKLATVNPRLDFNIDDLFEKEVF-PNCDANAS-FQAMGMST 294
Query: 455 AFFSHQPQ------QNPALHGNISNGTMTQCPVDPLDNALCRNLS--MQLPQL----EQF 502
S+ P Q +G + G ++P D L R++S + +PQ F
Sbjct: 295 GLNSNNPYLQFNSPQQFVPYGGLDAG------MNPSDMGLRRSISAPVSIPQTFIDSSCF 348
Query: 503 TETIPQFQNFGEDDLQSIVQMGFGQNPNSETSLQSQSFHGSNQAPHMKAEL 553
++ +P E D Q++ F Q + QSQ F G +A ++K E+
Sbjct: 349 SQILP--STIWEGDFQNLYNFNFDQARATSFPTQSQLFTGLVEANNLKIEM 397
>gi|449463525|ref|XP_004149484.1| PREDICTED: transcription factor bHLH49-like [Cucumis sativus]
Length = 533
Score = 187 bits (475), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 127/319 (39%), Positives = 167/319 (52%), Gaps = 48/319 (15%)
Query: 160 VAEFSADPGFAERAARFSRFGSRSFNGRSTGQF-----VPNHNPDQFG---------LSR 205
+++ AD F ERAARFS F + F G F + H+ FG +S+
Sbjct: 143 LSQLPADSAFIERAARFSCFNNGVFGAPPAGPFGISDSLGIHSGGGFGRQEVISRNGVSK 202
Query: 206 SNNNPNPMTANEKLPRVSSSPSLKVLGSQAQATGNKSPQDRSE--LANSQEESSVSEQVP 263
+ P + A EK P + S Q +S D E + Q+E
Sbjct: 203 DVSLPMELEAEEKSPPKNEKDSEMSQDRAKQGCVGESGNDSDEAGFSGGQDEQCTMGGTM 262
Query: 264 ND-------FNSRKRKAVSKGKGKETAASPSVNNTTKVAEANASESSKNKRCKPNEGKAN 316
+ F RKR + G G+ A +N T K N + +N P+ +
Sbjct: 263 TEPSTEGLCFKKRKRGEQNVGLGQVKEAPQQINETAKNGAFNQQKGGQN----PSSTTSK 318
Query: 317 GNGAVKAEDEGDDKQAKANNAKPPEPPKDYIHVRARRGQATDSHSLAERVRREKISERMK 376
G KQ K ++ P ++YIHVRARRGQAT+SHSLAERVRREKISERM+
Sbjct: 319 PAG----------KQGKQDSQPSDAPKEEYIHVRARRGQATNSHSLAERVRREKISERMR 368
Query: 377 LLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMKLASVNTRLELNVDALMSKDIY 436
LLQDLVPGC+KVTGKA+MLDEIINYVQSLQRQVEFLSMKLA+VN RL+ N++ L++K+
Sbjct: 369 LLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDFNIEELLTKEFI 428
Query: 437 Q-----------PNKPLPH 444
Q P+ P+P+
Sbjct: 429 QSKAGPSLFGFPPDMPVPY 447
>gi|219363183|ref|NP_001136483.1| uncharacterized protein LOC100216597 [Zea mays]
gi|194695886|gb|ACF82027.1| unknown [Zea mays]
gi|413920793|gb|AFW60725.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 469
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 132/303 (43%), Positives = 161/303 (53%), Gaps = 63/303 (20%)
Query: 265 DFNSRKRKAVSKGKGKETAASPSVNNTTKVAEANASESSKNKRCKPNEGK----ANGNGA 320
D RKRKA S K++ A +V TT E+ + ++ K+CK + + A G G
Sbjct: 177 DGPCRKRKA-SGTSSKQSKAKEAV--TTAPPESRETAETRAKKCKLSTDEERKPAAGEGW 233
Query: 321 VKAEDEGDDKQAKANNAKPPEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQD 380
G K+ A +A EPPKDYIHVRARRGQATDSHSLAERVRREKI ERMKLLQD
Sbjct: 234 ---RGSGKGKELVAADA---EPPKDYIHVRARRGQATDSHSLAERVRREKIGERMKLLQD 287
Query: 381 LVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMKLASVNTRLELNVD------------ 428
LVPGC+KVTGKA+MLDEIINYVQSLQRQVEFLSMKL++VN RLEL D
Sbjct: 288 LVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLSTVNPRLELGADDSFVPRDDANKM 347
Query: 429 ---ALMSKDIYQPNKPLPHSIFQIDSSASAFFSHQPQQNPALHGNIS------------- 472
A S + Q PLP + ++ S+ AF P +
Sbjct: 348 CAAATSSISMAQQPLPLPAAYHALEGSSPAFCYTTTPPAPGTAARLGVAASDAKAFEMAP 407
Query: 473 ---------NGTMTQCPVD-PLDNALCRNLSMQLPQLEQFTETIPQFQNFGEDDLQSIVQ 522
GT + P++ P D N S Q+ + E G+DDLQS+V
Sbjct: 408 PSSAATVNHAGTAERRPLEGPADE----NASPQMGGRSLWEE--------GDDDLQSLVL 455
Query: 523 MGF 525
MGF
Sbjct: 456 MGF 458
>gi|357152259|ref|XP_003576061.1| PREDICTED: transcription factor bHLH49-like [Brachypodium
distachyon]
Length = 211
Score = 186 bits (472), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 115/228 (50%), Positives = 138/228 (60%), Gaps = 37/228 (16%)
Query: 313 GKANGNGAVKAEDEGDDKQAKANNAKPPEPPKDYIHVRARRGQATDSHSLAERVRREKIS 372
G+ GNG K ++ +D P KDYIHVRARRGQATDSHSLAERVRREKIS
Sbjct: 8 GELGGNGKGKEKEVAED------------PHKDYIHVRARRGQATDSHSLAERVRREKIS 55
Query: 373 ERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMKLASVNTRLELNVDALMS 432
ERMKLLQDLVP CNKVTGKA+MLDEIINYVQSLQRQVEFLSMKL++VN ++E +VD +
Sbjct: 56 ERMKLLQDLVPSCNKVTGKAVMLDEIINYVQSLQRQVEFLSMKLSTVNPQMEFDVDNFLP 115
Query: 433 KDIYQPNKPLPHSIFQIDSSAS-AFFSHQPQQNPALHGNISNGTMTQCPVDPLDNALCRN 491
KD +P LP + + A+ A F + P TM Q + A+C
Sbjct: 116 KDDNEPCS-LPATAYTAAEGANPAAFCYPPSPEAG------KATMQQSAL-----AICSK 163
Query: 492 LSMQLPQLEQFTETIPQ-------FQN----FGEDDLQSIVQMGFGQN 528
++P L TIP QN + +DDLQS+VQMGF N
Sbjct: 164 -GFEVPSLFVTHGTIPASSSHQELIQNACNLWEDDDLQSVVQMGFRGN 210
>gi|115467562|ref|NP_001057380.1| Os06g0275600 [Oryza sativa Japonica Group]
gi|55295989|dbj|BAD68029.1| putative TA1 protein [Oryza sativa Japonica Group]
gi|113595420|dbj|BAF19294.1| Os06g0275600 [Oryza sativa Japonica Group]
Length = 437
Score = 186 bits (471), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 149/399 (37%), Positives = 188/399 (47%), Gaps = 64/399 (16%)
Query: 163 FSADPGFAERAARFSRFGSRSFNGRSTGQFVPNHNPDQFGLSRSNNNPNPMTANEKLPRV 222
F A PGF + A F + + F H P L N P E + +
Sbjct: 89 FVATPGFVDSTAGFPCYNGGNLGAMINHPFPGIHQP----LGDFQNGVEPCREIEDI-EI 143
Query: 223 SSSPSLKVLGSQAQATGNK-----------SPQDRSELANSQEESSVSEQVPNDFNSRKR 271
S ++ G + Q G S R+ A E + VS S+KR
Sbjct: 144 EGSKNVSQTGEKQQGDGETTHAVDSSSKELSMPGRNGGAGHDEGTRVS-------CSKKR 196
Query: 272 KAVSKGKGKETAASPSVNNTTKVAEANAS-ESSKNKRCKPNEGKANGNGAVKAEDEGDDK 330
K + G + A T A+ N E + KR GK++G K
Sbjct: 197 KRSGQDGGVKHAEGGEQLATVGSAQKNEDDEKGEPKRSSVASGKSSG------------K 244
Query: 331 QAKANNAKPPEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTG 390
Q K N P E DYIHVRARRGQAT+SHSLAERVRREKISERMK LQDLVPGC+KVTG
Sbjct: 245 QIKDNAGSPKE---DYIHVRARRGQATNSHSLAERVRREKISERMKYLQDLVPGCSKVTG 301
Query: 391 KALMLDEIINYVQSLQRQVEFLSMKLASVNTRLELNVDALMSKDIYQPNKPLPHSIFQID 450
KA+MLDEIINYVQSLQRQVEFLSMKLASVN L+ N++ ++SKDI+Q
Sbjct: 302 KAVMLDEIINYVQSLQRQVEFLSMKLASVNPTLDFNIERILSKDIFQCRG-------TTA 354
Query: 451 SSASAFFSH--QPQQNPALHGNISNGTMTQCPVDPLDNALCRNLSMQLPQLEQFTETIPQ 508
SSA FF P+ +P + + ++ V+P D A R + L F E Q
Sbjct: 355 SSAFGFFPDIVHPRLHPPKYTQVGMPSI----VNPTD-AFGRVIHAPLGTNSAFKEPKHQ 409
Query: 509 FQNFGEDDLQSIVQMGFGQNPNSETSLQSQSFHGSNQAP 547
N + Q +++M F + HGSN P
Sbjct: 410 MPNNLNGEFQDVIEMPF-----------THDHHGSNDQP 437
>gi|168059612|ref|XP_001781795.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162666702|gb|EDQ53349.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 656
Score = 186 bits (471), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 155/385 (40%), Positives = 210/385 (54%), Gaps = 74/385 (19%)
Query: 216 NEKLP-RVSSSPSLKVLGSQAQATGNKSPQDRSELANSQE---ESSVSEQV--------- 262
N+K P R +S P L+ + + T +++ + +E+A E SSV+EQ
Sbjct: 299 NDKSPTRTASVPELEAIEGASLVTMDRT-HELAEVAAGLEPNNSSSVTEQQQASAASPAR 357
Query: 263 ----PNDFNSRKRKAVSKGKGKETAASPSVNNTTKVAEANASESSKNKRCKPN-----EG 313
+D + RKRK+ S K ++ +K A+ S+ KRCK + +
Sbjct: 358 SPTGSDDSDRRKRKSSSADK---------LDVDSKAADV---ADSQPKRCKGDNDDLVKA 405
Query: 314 KANGNGAVKAEDEGDDKQAKANNAKPPEPPKDYIHVRARRGQATDSHSLAERVRREKISE 373
KA + + + D G + K NN+ +DYIHVRARRGQATDSHSLAERVRREKISE
Sbjct: 406 KAERSSSENSGDSGSPRAHKENNSSKDHAKQDYIHVRARRGQATDSHSLAERVRREKISE 465
Query: 374 RMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMKLASVN-----TRLELNVD 428
RMK LQDLVPGC+KVTGKA+MLDEIINYVQSLQRQVE LSMKLASVN TR++ N +
Sbjct: 466 RMKYLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVENLSMKLASVNPGPSSTRIDHNFE 525
Query: 429 ALMSKDIYQPNKPLPHSIFQIDSSASAFFSHQPQQNPALHGNISNGTMTQCPVD------ 482
M+KD+ Q + S+ +S+ + Q Q P G++ NG C +D
Sbjct: 526 TTMNKDMLQSQ--MSGSLGGSESTTTFGMMQQHQHQPQPQGHMMNG---HCGLDFRAMGT 580
Query: 483 PLDNALCRN----LSMQ--LPQLEQFTETIPQFQNFGED-DLQSIV-QMGF------GQN 528
+D L R+ + +Q + L+ F + + Q+ G D +LQSIV QMGF G +
Sbjct: 581 SMDGYLRRSNSAPIRVQSGITSLDSFGDDVS--QSIGWDGELQSIVNQMGFSFQGRYGSS 638
Query: 529 PNSETSLQSQSFHGSNQAPHMKAEL 553
P SLQ Q G HMK E+
Sbjct: 639 P--LDSLQCQLPVG-----HMKVEM 656
>gi|357473295|ref|XP_003606932.1| BHLH transcription factor [Medicago truncatula]
gi|355507987|gb|AES89129.1| BHLH transcription factor [Medicago truncatula]
Length = 344
Score = 186 bits (471), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 128/284 (45%), Positives = 164/284 (57%), Gaps = 41/284 (14%)
Query: 295 AEANASESSKNKRCKPN--EG--------KANGNGAVKAEDEGDDKQAKAN-------NA 337
A+ SK+KR K + EG K N N +K + DD +K N N
Sbjct: 77 ADHKVDMKSKDKRIKVSVEEGESKITEQIKGNKNTKLKNRENCDDVGSKENSKGSEIQNH 136
Query: 338 KPPEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDE 397
KP DYIHVRARRGQATDSHSLAERVRREKISERMK LQDLVPGCNK+ GKA MLDE
Sbjct: 137 KP-----DYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKIAGKAGMLDE 191
Query: 398 IINYVQSLQRQVEFLSMKLASVNTRLELNVDALMSKDIYQPNKPLPHSIFQIDSSASAFF 457
IINYVQSLQRQVEFLSMKLA+VN RL+ N+D L +K+++ N + S ++ + A F
Sbjct: 192 IINYVQSLQRQVEFLSMKLAAVNPRLDFNIDELFAKEVFTQNFQMMQS--EMSNPAYLQF 249
Query: 458 SHQPQQNPALHGNISNGTMTQCPVDPLDNALCRNL----SMQLPQL----EQFTETIPQF 509
+ QQ G I+N + P + + RN+ S LP++ FT +P
Sbjct: 250 NSAQQQVSCCGGLINNMGIL-----PPEIGVRRNINAPASASLPEIFLDPSCFTHILP-- 302
Query: 510 QNFGEDDLQSIVQMGFGQNPNSETSLQSQSFHGSNQAPHMKAEL 553
+ E D Q++ + F Q + TS SQ F G +A ++K E+
Sbjct: 303 SSTWEGDFQNLHSVDFDQGRS--TSFPSQPFTGMIEASNLKMEM 344
>gi|356517054|ref|XP_003527205.1| PREDICTED: transcription factor bHLH63-like [Glycine max]
Length = 384
Score = 185 bits (470), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 118/235 (50%), Positives = 145/235 (61%), Gaps = 32/235 (13%)
Query: 332 AKANNAKPPEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGK 391
A+ +N+K E P DYIHVRARRGQATDSHSLAERVRREKISERMK LQDLVPGCNKVTGK
Sbjct: 169 AETSNSKASEKP-DYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKVTGK 227
Query: 392 ALMLDEIINYVQSLQRQVEFLSMKLASVNTRLELNVDALMSKDIYQ------PNKPLPHS 445
A MLDEIINYVQSLQRQVEFLSMKLA+VN RL+L++D L KD++ PN + +
Sbjct: 228 AGMLDEIINYVQSLQRQVEFLSMKLAAVNPRLDLSIDDLFDKDVFSTCATNFPNIGISST 287
Query: 446 IFQIDSSASAFFS-HQPQQNPALHGNISNGTMTQCPVDPLDNALCRNLS--MQLP----Q 498
D S A+ + PQQ + G +DP D L R +S + +P Q
Sbjct: 288 ---SDISNPAYLQFNSPQQIFSYDG-----------LDPSDMGLRRTISAPVSMPETYLQ 333
Query: 499 LEQFTETIPQFQNFGEDDLQSIVQMGFGQNPNSETSLQSQSFHGSNQAPHMKAEL 553
FT+ +P + E D Q++ F Q TS SQ G +A ++K E+
Sbjct: 334 SSCFTQMLP--SSTWEGDFQNLCNFDFDQ--ARATSFPSQLLSGLVEAGNLKMEM 384
>gi|222635385|gb|EEE65517.1| hypothetical protein OsJ_20959 [Oryza sativa Japonica Group]
Length = 545
Score = 185 bits (470), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 149/399 (37%), Positives = 188/399 (47%), Gaps = 64/399 (16%)
Query: 163 FSADPGFAERAARFSRFGSRSFNGRSTGQFVPNHNPDQFGLSRSNNNPNPMTANEKLPRV 222
F A PGF + A F + + F H P L N P E + +
Sbjct: 197 FVATPGFVDSTAGFPCYNGGNLGAMINHPFPGIHQP----LGDFQNGVEPCREIEDI-EI 251
Query: 223 SSSPSLKVLGSQAQATGNK-----------SPQDRSELANSQEESSVSEQVPNDFNSRKR 271
S ++ G + Q G S R+ A E + VS S+KR
Sbjct: 252 EGSKNVSQTGEKQQGDGETTHAVDSSSKELSMPGRNGGAGHDEGTRVS-------CSKKR 304
Query: 272 KAVSKGKGKETAASPSVNNTTKVAEANAS-ESSKNKRCKPNEGKANGNGAVKAEDEGDDK 330
K + G + A T A+ N E + KR GK++G K
Sbjct: 305 KRSGQDGGVKHAEGGEQLATVGSAQKNEDDEKGEPKRSSVASGKSSG------------K 352
Query: 331 QAKANNAKPPEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTG 390
Q K N P E DYIHVRARRGQAT+SHSLAERVRREKISERMK LQDLVPGC+KVTG
Sbjct: 353 QIKDNAGSPKE---DYIHVRARRGQATNSHSLAERVRREKISERMKYLQDLVPGCSKVTG 409
Query: 391 KALMLDEIINYVQSLQRQVEFLSMKLASVNTRLELNVDALMSKDIYQPNKPLPHSIFQID 450
KA+MLDEIINYVQSLQRQVEFLSMKLASVN L+ N++ ++SKDI+Q
Sbjct: 410 KAVMLDEIINYVQSLQRQVEFLSMKLASVNPTLDFNIERILSKDIFQCRG-------TTA 462
Query: 451 SSASAFFSH--QPQQNPALHGNISNGTMTQCPVDPLDNALCRNLSMQLPQLEQFTETIPQ 508
SSA FF P+ +P + + ++ V+P D A R + L F E Q
Sbjct: 463 SSAFGFFPDIVHPRLHPPKYTQVGMPSI----VNPTD-AFGRVIHAPLGTNSAFKEPKHQ 517
Query: 509 FQNFGEDDLQSIVQMGFGQNPNSETSLQSQSFHGSNQAP 547
N + Q +++M F + HGSN P
Sbjct: 518 MPNNLNGEFQDVIEMPF-----------THDHHGSNDQP 545
>gi|357516845|ref|XP_003628711.1| BHLH transcription factor [Medicago truncatula]
gi|355522733|gb|AET03187.1| BHLH transcription factor [Medicago truncatula]
Length = 467
Score = 185 bits (470), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 129/316 (40%), Positives = 175/316 (55%), Gaps = 32/316 (10%)
Query: 159 SVAEFSADPGFAERAARFSRFGSRSFNGRSTGQFVPNHNPDQFGLSRS----NNNPNPMT 214
S+++FS D GF + AAR S F + SF +P +SRS ++ +P+
Sbjct: 125 SLSQFSTDSGFVD-AARMSCFSAGSFVDMMNSCGIPQSMALPLHVSRSVEHLGSDGSPIQ 183
Query: 215 ANEK--LPRVSSSPSLKVLGSQA-QATGNKSPQDRSELANSQEESSVSEQVPNDFNSRKR 271
+ + P +S +VLG +A G++S D + + + E N +KR
Sbjct: 184 NDRRSDCPVMSQDEGKQVLGRSCNEADGDESSGDD---GSQMLDCASGEPSIKGLNPKKR 240
Query: 272 KAVSKGKGKETAASPSVNNTTKVAEANASESSKNKRCKPNEGKANGNGAVKAEDEGDDKQ 331
K + G A+ ++ ++ A+ N K K+ + KA+G K
Sbjct: 241 KRNGQ-DGDSDKATGTLELPSETAKDNCESRKKGKQQTSSTAKASG------------KN 287
Query: 332 AKANNAKPPEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGK 391
AK + P + Y+HVRARRGQAT+SHSLAERVRREKISERMK LQDLVPGCNKVTGK
Sbjct: 288 AKQGSQASDPPNEGYVHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCNKVTGK 347
Query: 392 ALMLDEIINYVQSLQRQVEFLSMKLASVNTRLELNVDALMSKDIYQPNKPLPHSIFQIDS 451
A+MLDEIINYVQSLQ+QVEFLSMKLA+VN ++ N++ L+ KDI Q ++P P S
Sbjct: 348 AVMLDEIINYVQSLQQQVEFLSMKLATVNPHVDFNMERLLPKDILQ-HQPGP-------S 399
Query: 452 SASAFFSHQPQQNPAL 467
SA F P P L
Sbjct: 400 SALGFLREMPMAFPPL 415
>gi|218197962|gb|EEC80389.1| hypothetical protein OsI_22515 [Oryza sativa Indica Group]
Length = 494
Score = 185 bits (469), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 149/399 (37%), Positives = 188/399 (47%), Gaps = 64/399 (16%)
Query: 163 FSADPGFAERAARFSRFGSRSFNGRSTGQFVPNHNPDQFGLSRSNNNPNPMTANEKLPRV 222
F A PGF + A F + + F H P L N P E + +
Sbjct: 146 FVATPGFVDSTAGFPCYNGGNLGAMINHPFPGIHQP----LGDFQNGVEPCREIEDI-EI 200
Query: 223 SSSPSLKVLGSQAQATGNK-----------SPQDRSELANSQEESSVSEQVPNDFNSRKR 271
S ++ G + Q G S R+ A E + VS S+KR
Sbjct: 201 EGSKNVSQTGEKQQGDGETTHAVDSSSKELSMPGRNGGAGHDEGTRVS-------CSKKR 253
Query: 272 KAVSKGKGKETAASPSVNNTTKVAEANAS-ESSKNKRCKPNEGKANGNGAVKAEDEGDDK 330
K + G + A T A+ N E + KR GK++G K
Sbjct: 254 KRSGQDGGVKHAEGGEQLATVGSAQKNEDDEKGEPKRSSVASGKSSG------------K 301
Query: 331 QAKANNAKPPEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTG 390
Q K N P E DYIHVRARRGQAT+SHSLAERVRREKISERMK LQDLVPGC+KVTG
Sbjct: 302 QIKDNAGSPKE---DYIHVRARRGQATNSHSLAERVRREKISERMKYLQDLVPGCSKVTG 358
Query: 391 KALMLDEIINYVQSLQRQVEFLSMKLASVNTRLELNVDALMSKDIYQPNKPLPHSIFQID 450
KA+MLDEIINYVQSLQRQVEFLSMKLASVN L+ N++ ++SKDI+Q
Sbjct: 359 KAVMLDEIINYVQSLQRQVEFLSMKLASVNPTLDFNIERILSKDIFQCRG-------TTA 411
Query: 451 SSASAFFSH--QPQQNPALHGNISNGTMTQCPVDPLDNALCRNLSMQLPQLEQFTETIPQ 508
SSA FF P+ +P + + ++ V+P D A R + L F E Q
Sbjct: 412 SSAFGFFPDIVHPRLHPPKYTQVGMPSI----VNPTD-AFGRVIHAPLGTNSAFKEPKHQ 466
Query: 509 FQNFGEDDLQSIVQMGFGQNPNSETSLQSQSFHGSNQAP 547
N + Q +++M F + HGSN P
Sbjct: 467 MPNNLNGEFQDVIEMPF-----------THDHHGSNDQP 494
>gi|297838663|ref|XP_002887213.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297333054|gb|EFH63472.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 487
Score = 185 bits (469), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 141/340 (41%), Positives = 178/340 (52%), Gaps = 55/340 (16%)
Query: 141 PPKLNLPMSLGNSMPLNSSVAEFSADPGFAERAARFSRFGSRSFNGRSTGQFVPNHNPDQ 200
PPK N S L S+A+F AD GF ERAARFS F +F+ P NP+
Sbjct: 104 PPKGNGLFLPNASTFLPPSMAQFPADSGFIERAARFSLFSGGNFSDMVN---QPLGNPES 160
Query: 201 FGLSRSNNNP-------NPMTANEKLPRVSSSPSLKVLGSQAQA------TGNKSPQDRS 247
GL + + E VS++ + S QA +GN S +S
Sbjct: 161 IGLFLQGGGTMQGQCQCDELNVGEPHNDVSTAVKDPTVRSCEQAKPNVPGSGNVSEDTQS 220
Query: 248 ELANSQEESSVSEQVPNDFNSRKRKAVSKGKGKETAASPSVNNTTKVAEANASESSKNKR 307
N ++ S N++KRK G+ AA + ++ N + +N
Sbjct: 221 SGGNGRKGRETSS------NTKKRK--RNGQVNSEAAQSHRSQQSEEEPDNNGDKKRNSE 272
Query: 308 CKPNEGKANGNGAVKAEDEGDDKQAKANNAKPPEPPKD-YIHVRARRGQATDSHSLAERV 366
PN + GN + +G KQ+ + PKD YIHVRARRGQAT+SHSLAERV
Sbjct: 273 QSPN---SPGNKTNSGKRQG--KQSS-------DLPKDGYIHVRARRGQATNSHSLAERV 320
Query: 367 RREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMKLASVNTRLELN 426
RREKISERMK LQDLVPGCNKVTGKA+MLDEIINYVQSLQRQVEFLSMKLA+VN +++ N
Sbjct: 321 RREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPQMDFN 380
Query: 427 VDALMSKDIYQ-------------PNK-----PLPHSIFQ 448
++ L++KD Q PN PLPH Q
Sbjct: 381 LEGLLAKDALQLRAGSSSTTTPFTPNMAMAYPPLPHGFMQ 420
>gi|290767992|gb|ADD60699.1| putative TA1 protein [Oryza officinalis]
Length = 435
Score = 185 bits (469), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 159/435 (36%), Positives = 206/435 (47%), Gaps = 74/435 (17%)
Query: 137 PLNSPPKLNLP----MSLGNSM------PLNSSVAEFSADPGFAERAARFSRFGSRSFNG 186
P PP L P M LG + L++ V F+ PGF + AA F + +
Sbjct: 51 PFPIPPGLWNPPSHNMGLGETSFSSLLGMLSAGVPPFATTPGFVDSAAGFPCYNGGNLGA 110
Query: 187 RSTGQFVPNHNPDQFGLSRSNNNPNPMTANEKLPRVSSSPSLKVLGSQAQATG------N 240
+ F H P L+ N E + + S ++ G + Q G +
Sbjct: 111 MTNFSFPTTHQP----LADFQNGVESCREIEAI-VIEGSKNVSQTGEKQQGDGETTHAVD 165
Query: 241 KSPQDRSEL-----ANSQEESSVSEQVPNDFNSRKRKAVSKGKGKETAASPSVNNTTKVA 295
S ++ S L A EE VS S+KRK + G + A T A
Sbjct: 166 SSSKELSMLGCNGGAGHDEEIRVS-------CSKKRKRSGQDGGVKHAEGGEQLATVGSA 218
Query: 296 EANASESSKN-KRCKPNEGKANGNGAVKAEDEGDDKQAKANNAKPPEPPKDYIHVRARRG 354
+ N ++ + KR K++G KQ K N P E DYIHVRARRG
Sbjct: 219 KKNENDDNGEPKRSSVASRKSSG------------KQTKDNAGSPKE---DYIHVRARRG 263
Query: 355 QATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSM 414
QAT+SHSLAERVRREKISERMK LQDLVPGC+KVTGKA+MLDEIINYVQSLQRQVEFLSM
Sbjct: 264 QATNSHSLAERVRREKISERMKYLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSM 323
Query: 415 KLASVNTRLELNVDALMSKDIYQPNKPLPHSIFQIDSSASAFFSH--QPQQNPALHGNIS 472
KLASVN L+ N++ ++SKDI+Q S SSA FF P+ +P + +
Sbjct: 324 KLASVNPTLDFNIERILSKDIFQ-------SRGTTASSAFGFFPDIVHPRLHPPKYTQVG 376
Query: 473 NGTMTQCPVDPLDNALCRNLSMQLPQLEQFTETIPQFQNFGEDDLQSIVQMGFGQNPNSE 532
++ V+P D A R L F E Q N + Q +++M F
Sbjct: 377 MPSI----VNPTD-AFGRATHAPLGTNSSFKEPKHQMPNNLNGEFQDVIEMPF------- 424
Query: 533 TSLQSQSFHGSNQAP 547
+ HGSN P
Sbjct: 425 ----THDHHGSNDQP 435
>gi|323388959|gb|ADX60284.1| bHLH transcription factor [Oryza sativa Japonica Group]
Length = 437
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 148/399 (37%), Positives = 188/399 (47%), Gaps = 64/399 (16%)
Query: 163 FSADPGFAERAARFSRFGSRSFNGRSTGQFVPNHNPDQFGLSRSNNNPNPMTANEKLPRV 222
F A PGF + A F + + F H P L N P E + +
Sbjct: 89 FVATPGFVDSTAGFPCYNGGNLGAMINHPFPGIHQP----LGDFQNGVEPCREIEDI-EI 143
Query: 223 SSSPSLKVLGSQAQATGNK-----------SPQDRSELANSQEESSVSEQVPNDFNSRKR 271
S ++ G + Q G S R+ A E + VS S+KR
Sbjct: 144 EGSKNVSQTGEKQQGDGETTHAVDSSSKELSMPGRNGGAGHDEGTRVS-------CSKKR 196
Query: 272 KAVSKGKGKETAASPSVNNTTKVAEANAS-ESSKNKRCKPNEGKANGNGAVKAEDEGDDK 330
K + G + A T A+ N E + +R GK++G K
Sbjct: 197 KRSGQDGGVKHAEGGEQLATVGSAQKNEDDEKGEPERSSVASGKSSG------------K 244
Query: 331 QAKANNAKPPEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTG 390
Q K N P E DYIHVRARRGQAT+SHSLAERVRREKISERMK LQDLVPGC+KVTG
Sbjct: 245 QIKDNAGSPKE---DYIHVRARRGQATNSHSLAERVRREKISERMKYLQDLVPGCSKVTG 301
Query: 391 KALMLDEIINYVQSLQRQVEFLSMKLASVNTRLELNVDALMSKDIYQPNKPLPHSIFQID 450
KA+MLDEIINYVQSLQRQVEFLSMKLASVN L+ N++ ++SKDI+Q
Sbjct: 302 KAVMLDEIINYVQSLQRQVEFLSMKLASVNPTLDFNIERILSKDIFQCRG-------TTA 354
Query: 451 SSASAFFSH--QPQQNPALHGNISNGTMTQCPVDPLDNALCRNLSMQLPQLEQFTETIPQ 508
SSA FF P+ +P + + ++ V+P D A R + L F E Q
Sbjct: 355 SSAFGFFPDIVHPRLHPPKYTQVGMPSI----VNPTD-AFGRVIHAPLGTNSAFKEPKHQ 409
Query: 509 FQNFGEDDLQSIVQMGFGQNPNSETSLQSQSFHGSNQAP 547
N + Q +++M F + HGSN P
Sbjct: 410 MPNNLNGEFQDVIEMPF-----------THDHHGSNDQP 437
>gi|302766193|ref|XP_002966517.1| hypothetical protein SELMODRAFT_72702 [Selaginella moellendorffii]
gi|302801203|ref|XP_002982358.1| hypothetical protein SELMODRAFT_72704 [Selaginella moellendorffii]
gi|300149950|gb|EFJ16603.1| hypothetical protein SELMODRAFT_72704 [Selaginella moellendorffii]
gi|300165937|gb|EFJ32544.1| hypothetical protein SELMODRAFT_72702 [Selaginella moellendorffii]
Length = 102
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 86/101 (85%), Positives = 97/101 (96%), Gaps = 1/101 (0%)
Query: 336 NAKPPEPPK-DYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALM 394
N+KPPEPPK DYIHVRARRGQATDSHSLAERVRREKISERMK LQDLVPGC+KVTGKA+M
Sbjct: 2 NSKPPEPPKQDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVM 61
Query: 395 LDEIINYVQSLQRQVEFLSMKLASVNTRLELNVDALMSKDI 435
LDEIINYVQSLQRQVEFLSMKLA+VN RL++N+D L++K++
Sbjct: 62 LDEIINYVQSLQRQVEFLSMKLAAVNPRLDINLDGLLTKEV 102
>gi|357467301|ref|XP_003603935.1| Transcription factor BEE [Medicago truncatula]
gi|355492983|gb|AES74186.1| Transcription factor BEE [Medicago truncatula]
Length = 398
Score = 184 bits (466), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 127/291 (43%), Positives = 161/291 (55%), Gaps = 26/291 (8%)
Query: 280 KETAASPSVNNTTKVAEANASESSKNKRCK----PNEGKANGNGAVKAEDEGDDKQAKAN 335
K A N+ KV +K+KR K E K GN K +D
Sbjct: 117 KRKAEKSHHNSKLKVVVGEIEIENKDKRIKIGSEDGESKITGNPNTKKNCVAEDTSNSKE 176
Query: 336 NAKPPEPPK-DYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALM 394
N+K + K DYIHVRARRGQATDSHSLAERVRREKISERMK LQDLVPGCNK+TGKA M
Sbjct: 177 NSKVSDVQKTDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGM 236
Query: 395 LDEIINYVQSLQRQVEFLSMKLASVNTRLELNVDALMSKDIYQPNKPLPHSIFQIDSSAS 454
LDEIINYVQSLQ+QVEFLSMKLA+VN RL+ N+D L K+++ PN S FQ ++
Sbjct: 237 LDEIINYVQSLQKQVEFLSMKLATVNPRLDFNIDDLFEKEVF-PNCDANAS-FQAMGMST 294
Query: 455 AFFSHQPQ------QNPALHGNISNGTMTQCPVDPLDNALCRNLS--MQLPQL----EQF 502
S+ P Q +G + G ++P D L R++S + +PQ F
Sbjct: 295 GLNSNNPYLQFNSPQQFVPYGGLDAG------MNPSDMGLRRSISAPVSIPQTFIDSSCF 348
Query: 503 TETIPQFQNFGEDDLQSIVQMGFGQNPNSETSLQSQSFHGSNQAPHMKAEL 553
++ I E D Q++ F Q + QSQ F G +A ++K E+
Sbjct: 349 SQQILP-STIWEGDFQNLYNFNFDQARATSFPTQSQLFTGLVEANNLKIEM 398
>gi|339716200|gb|AEJ88339.1| putative MYC protein [Tamarix hispida]
Length = 301
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 120/244 (49%), Positives = 153/244 (62%), Gaps = 36/244 (14%)
Query: 251 NSQEESSVSEQVPNDFNS--RKRKAVSKGKGKETAASPSVNNTTKVAEANASESSKN-KR 307
S EES+V+EQ + RKRK V E +S V+ TT +A+E ++N KR
Sbjct: 75 GSIEESTVTEQSGSHGGGGCRKRKDVIS----EDESSKLVSATT-----SANELTENGKR 125
Query: 308 CKPNEGKANGNG---AVKAEDEGDDKQAKANNAKPPEPPKDYIHVRARRGQATDSHSLAE 364
K + + NG ++A G K A+ +++PPEPPKDYIHVRARRGQATDSHSLAE
Sbjct: 126 MKISGSRYENNGSKTGIEASSSGGGKSAE-KSSQPPEPPKDYIHVRARRGQATDSHSLAE 184
Query: 365 RVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMKLASVNTRLE 424
R RREKISERMK+LQDLVPGCNKV GKAL+LDEIINY+QSLQRQVEFLSMKL VN+ +
Sbjct: 185 RARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEVVNSGVN 244
Query: 425 LNVDALMSKDIYQPNKPLPHSIFQIDSSASAFFSHQ--------PQQNPA-----LHGNI 471
++ SKD+ Q L + F+ +A+ F+ Q PQ +P L G++
Sbjct: 245 PAINCFPSKDVNQ----LAPTTFE---AAAMMFASQSARGFEPAPQPHPEWLRMHLGGSL 297
Query: 472 SNGT 475
GT
Sbjct: 298 DRGT 301
>gi|55419646|gb|AAV51936.1| bHLH transcription factor [Gossypium hirsutum]
Length = 222
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 109/191 (57%), Positives = 128/191 (67%), Gaps = 13/191 (6%)
Query: 254 EESSVSEQVPNDFNSRKRKAVSKGKGKETAASPSVNNTTKVAEANASESSKNKRCKPNEG 313
EES+V+EQ RKRK +S E +S V+ TT E N S KR K
Sbjct: 2 EESTVTEQSVGCGGGRKRKELSS----EDESSKIVSTTTSANELN---DSNGKRMKTPVS 54
Query: 314 KANGNGAVKAEDEGD--DKQAKANNAKPPEPPK-DYIHVRARRGQATDSHSLAERVRREK 370
K G+ +AE E D N+KP EPPK DYIHVRARRGQATDSHSLAER RRE+
Sbjct: 55 KNGNTGSKEAEVEASSADGSKPDKNSKPAEPPKQDYIHVRARRGQATDSHSLAERARRER 114
Query: 371 ISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMKLASVNTRLELN--VD 428
ISERMK+LQDLVPGCNKV GKAL+LDEIINY+QSLQ+QVEFLSMKL +VN+R+ +N +
Sbjct: 115 ISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQQQVEFLSMKLEAVNSRINVNPSFE 174
Query: 429 ALMSKDI-YQP 438
SKD+ QP
Sbjct: 175 GFHSKDLGLQP 185
>gi|414589882|tpg|DAA40453.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 329
Score = 183 bits (464), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 118/226 (52%), Positives = 141/226 (62%), Gaps = 30/226 (13%)
Query: 251 NSQEESSVSEQV---PNDF-NSRKRKAVSKGK--GKETAASPSVNNTTKVAEANASESSK 304
S E SSVS+ D+ N+RKRKA G GKE S KVAEA +
Sbjct: 51 GSPEGSSVSDPAWARARDYGNARKRKAPPTGSAGGKEACLS-------KVAEAKGPD--- 100
Query: 305 NKRCK-------PNEGKANGNGAVKA----EDEGDDKQAKANNAKPPEPPKDYIHVRARR 353
KRC+ P + K A + E + K ++ EPPKDY+HVRARR
Sbjct: 101 GKRCRVVGASDSPVKPKEEEEEAAASDALVEVKAQKKGKGKSSKPAVEPPKDYVHVRARR 160
Query: 354 GQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLS 413
GQATDSHSLAERVRREKIS+RMK LQDLVPGCNKV GKALMLDEIINYVQSLQ+QVEFLS
Sbjct: 161 GQATDSHSLAERVRREKISQRMKFLQDLVPGCNKVVGKALMLDEIINYVQSLQQQVEFLS 220
Query: 414 MKLASVNTRLEL-NVDALMSKDIYQP--NKPLPHSIFQIDSSASAF 456
MKLA+VN L+ N+ L+ KD+YQ P S+F ++S+ +AF
Sbjct: 221 MKLATVNPELDFSNLSTLLHKDMYQQPCGGPSASSVFPLESAGAAF 266
>gi|290767978|gb|ADD60686.1| putative TA1 protein [Oryza australiensis]
Length = 436
Score = 182 bits (463), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 164/449 (36%), Positives = 203/449 (45%), Gaps = 76/449 (16%)
Query: 126 SSSTNASCYTT---PLNSPPKLNLP----MSLGNS-------MPLNSSVAEFSADPGFAE 171
+SS A+ TT P PP L P M LG + M S+ F+A PGF +
Sbjct: 37 ASSATANALTTMANPFPIPPGLWNPPSHNMGLGETSFSSLLGMLSASAPPPFAATPGFVD 96
Query: 172 RAARFSRFGSRSFNGRSTGQFVPNHNPDQFGLSRSNNNPNPMTANEKLPRVSSSPSLKVL 231
AA F + +F F H P N P E + S ++
Sbjct: 97 SAAGFPCYNGGNFGAMVNHSFPGTHLPS----GDFQNGVEPCREIEAIEN-EGSKNVTQT 151
Query: 232 GSQAQATGNK-----------SPQDRSELANSQEESSVSEQVPNDFNSRKRKAVSKGKGK 280
G + Q G S R+ A E + VS S+KRK + G
Sbjct: 152 GEKQQGDGETTCDVDSSSKELSMPGRNGGAGHDEGTRVS-------CSKKRKRSGQDDGV 204
Query: 281 ETAASPSVNNTTKVAEANA-SESSKNKRCKPNEGKANGNGAVKAEDEGDDKQAKANNAKP 339
+ A T A+ N E K KR GK++G KQ K N P
Sbjct: 205 KHAEGDEQLATVGSAQKNENDEKGKPKRSSVASGKSSG------------KQTKDNAGSP 252
Query: 340 PEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEII 399
E +YIHVRARRGQAT+SHSLAERVRREKISERMK LQ+LVPGC KVTGKA+MLDEII
Sbjct: 253 KE---EYIHVRARRGQATNSHSLAERVRREKISERMKYLQNLVPGCTKVTGKAVMLDEII 309
Query: 400 NYVQSLQRQVEFLSMKLASVNTRLELNVDALMSKDIYQPNKPLPHSIFQIDSSASAFFSH 459
NYVQSLQRQVEFLSMKLASVN L+ N++ ++SKDI+Q S+AS+ F
Sbjct: 310 NYVQSLQRQVEFLSMKLASVNPTLDFNIERILSKDIFQSR----------GSAASSAFGF 359
Query: 460 QPQ-QNPALHGNISNGTMTQCPVDPLDNALCRNLSMQLPQLEQFTETIPQFQNFGEDDLQ 518
P +P LH + V+ D A R L F E Q N + Q
Sbjct: 360 LPDIVHPRLHPPKYTQVVMPSIVNSTD-AFGRVARAPLGTNSAFKEPKHQMPNSLNGEFQ 418
Query: 519 SIVQMGFGQNPNSETSLQSQSFHGSNQAP 547
++M F + HGSN P
Sbjct: 419 DFIEMPF-----------THDHHGSNDQP 436
>gi|357124540|ref|XP_003563957.1| PREDICTED: transcription factor bHLH49-like [Brachypodium
distachyon]
Length = 441
Score = 182 bits (463), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 113/267 (42%), Positives = 152/267 (56%), Gaps = 25/267 (9%)
Query: 260 EQVPNDFNSRKRKAVSKGKGKETAASPSVNNTTKVAEANASESSKNKRCKPNEGKANGNG 319
++ P+ +++KRK + +G + S T VA+ K+ +P
Sbjct: 187 DEGPSVSSAKKRKRSGQDRGVKHVQEGSQQLATVVAKQEKDNDEKDGPKRP--------- 237
Query: 320 AVKAEDEGDDKQAKANNAKPPEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQ 379
+ A + + KQ + N+ P E DYIH+RAR GQAT+SHSLAERVRREKISERMK LQ
Sbjct: 238 -ISASRKSNGKQTEDNSDAPKE---DYIHIRARSGQATNSHSLAERVRREKISERMKFLQ 293
Query: 380 DLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMKLASVNTRLELNVDALMSKDIYQPN 439
DLVPGC+KV GKA+MLDEIINYVQSLQRQVEFLSMKL++VN L+ N++ ++SKD +Q
Sbjct: 294 DLVPGCSKVIGKAVMLDEIINYVQSLQRQVEFLSMKLSTVNPALDFNIERILSKDFFQSQ 353
Query: 440 KPLPHSIFQIDSSASAFFSHQPQQN-PALHGNISNGTMTQCPVDPLDNALCRNLSMQLPQ 498
S F S F HQP+ + ALHG V+P D A R + Q+
Sbjct: 354 GTPASSAFGFLPENSHHFLHQPKHSQAALHG----------IVNPTD-AFGRVTNAQVGS 402
Query: 499 LEQFTETIPQFQNFGEDDLQSIVQMGF 525
F E + Q N + + ++ M F
Sbjct: 403 SSSFKEPVHQMPNNFDGEFHNVTGMPF 429
>gi|293332473|ref|NP_001169219.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
gi|223975629|gb|ACN32002.1| unknown [Zea mays]
gi|414589883|tpg|DAA40454.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 350
Score = 182 bits (463), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 118/226 (52%), Positives = 141/226 (62%), Gaps = 30/226 (13%)
Query: 251 NSQEESSVSEQV---PNDF-NSRKRKAVSKGK--GKETAASPSVNNTTKVAEANASESSK 304
S E SSVS+ D+ N+RKRKA G GKE S KVAEA +
Sbjct: 51 GSPEGSSVSDPAWARARDYGNARKRKAPPTGSAGGKEACLS-------KVAEAKGPD--- 100
Query: 305 NKRCK-------PNEGKANGNGAVKA----EDEGDDKQAKANNAKPPEPPKDYIHVRARR 353
KRC+ P + K A + E + K ++ EPPKDY+HVRARR
Sbjct: 101 GKRCRVVGASDSPVKPKEEEEEAAASDALVEVKAQKKGKGKSSKPAVEPPKDYVHVRARR 160
Query: 354 GQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLS 413
GQATDSHSLAERVRREKIS+RMK LQDLVPGCNKV GKALMLDEIINYVQSLQ+QVEFLS
Sbjct: 161 GQATDSHSLAERVRREKISQRMKFLQDLVPGCNKVVGKALMLDEIINYVQSLQQQVEFLS 220
Query: 414 MKLASVNTRLEL-NVDALMSKDIYQP--NKPLPHSIFQIDSSASAF 456
MKLA+VN L+ N+ L+ KD+YQ P S+F ++S+ +AF
Sbjct: 221 MKLATVNPELDFSNLSTLLHKDMYQQPCGGPSASSVFPLESAGAAF 266
>gi|290768004|gb|ADD60710.1| putative TA1 protein [Oryza brachyantha]
Length = 426
Score = 182 bits (462), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 88/118 (74%), Positives = 99/118 (83%), Gaps = 3/118 (2%)
Query: 330 KQAKANNAKPPEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVT 389
KQAK N P E +YIHVRARRGQAT+SHSLAERVRREKISERMK LQDLVPGC+KVT
Sbjct: 233 KQAKDNAGSPKE---EYIHVRARRGQATNSHSLAERVRREKISERMKYLQDLVPGCSKVT 289
Query: 390 GKALMLDEIINYVQSLQRQVEFLSMKLASVNTRLELNVDALMSKDIYQPNKPLPHSIF 447
GKA+MLDEIINYVQSLQRQVEFLSMKLASVN L+ N+D ++SKDI+Q + S+F
Sbjct: 290 GKAVMLDEIINYVQSLQRQVEFLSMKLASVNPTLDFNIDRILSKDIFQSQGAIASSVF 347
>gi|225458914|ref|XP_002285475.1| PREDICTED: transcription factor bHLH74 [Vitis vinifera]
gi|302142156|emb|CBI19359.3| unnamed protein product [Vitis vinifera]
Length = 430
Score = 181 bits (460), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 103/203 (50%), Positives = 128/203 (63%), Gaps = 31/203 (15%)
Query: 329 DKQAKANNAKPPEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKV 388
+K AK N++ P ++YIHVRARRGQAT+SHSLAERVRREKISERM+LLQ+LVPGCNK+
Sbjct: 245 NKHAKDNSSNGEAPKENYIHVRARRGQATNSHSLAERVRREKISERMRLLQELVPGCNKI 304
Query: 389 TGKALMLDEIINYVQSLQRQVEFLSMKLASVNTRLELNVDALMSKDIYQPNKPLPHSIFQ 448
TGKA+MLDEIINYVQSLQ+QVEFLSMKLA+VN L ++++ L+SKDI
Sbjct: 305 TGKAVMLDEIINYVQSLQQQVEFLSMKLATVNPELNIDIERLLSKDILNSRGG------- 357
Query: 449 IDSSASAFFSHQPQQNPALHGNISNGTMTQCPVDPLDNALCRNLSMQLPQLEQFTETIPQ 508
+S F +P HG IS GT+ P QF T
Sbjct: 358 -STSVLGFGPGMSSSHPYPHG-ISQGTLPGIPT------------------PQFHST--- 394
Query: 509 FQNFGEDDLQSIVQMGFGQNPNS 531
Q + +LQS++QMGF NP+S
Sbjct: 395 -QAVWDGELQSLLQMGFDSNPSS 416
>gi|326489817|dbj|BAJ93982.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 427
Score = 181 bits (459), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 130/315 (41%), Positives = 165/315 (52%), Gaps = 51/315 (16%)
Query: 126 SSSTNASCYTTPLNSPPKLNLPMSLGNSMPLNSSVAEFSADPGFAERAARFSRFGSRSFN 185
S+S N + + P+ P P LG P++S GF ERAAR S F
Sbjct: 63 SASQNGAGFLAPV---PGFLPPPGLGGHFPVDS---------GFIERAARSSCFVGPGAG 110
Query: 186 GRSTGQFVPNHNPDQFGLSRSNNNPNPMTANEKLPRVSSSPSLKVLGSQAQATGNKSPQD 245
G G DQ + S+ L + + G+K+
Sbjct: 111 GGMIGAGAFGGAGDQ--------------------HMGSAFGEGYLDHRRKDGGDKA--- 147
Query: 246 RSELANSQEESSVSEQVPNDFNSRKRKAVSKGKGKETAASPSVNNTTKVAE-ANASESSK 304
ELA S S SE D +S+ + + + E V ++ A+ AN S SK
Sbjct: 148 EPELAGSGGVPS-SEAAGGDCSSKGSDSKKRRRPSEVMGGDQVQSSNVAADSANESVQSK 206
Query: 305 NK--RCKPNEGKANGNGAVKAEDEGDDKQAKANNAKPPEPPKDYIHVRARRGQATDSHSL 362
+K P G G ++K AK +DYIHVRARRGQAT+SHSL
Sbjct: 207 DKGEESSPATGTTTGG------------RSKGKGAKEGSEKEDYIHVRARRGQATNSHSL 254
Query: 363 AERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMKLASVNTR 422
AER+RREKISERMKLLQDLVPGC+KVTGKA+MLDEIINYVQSLQRQVEFLSMKLA+VN R
Sbjct: 255 AERLRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPR 314
Query: 423 LELNVDALMSKDIYQ 437
L+LN++ L+SKD+ +
Sbjct: 315 LDLNIEGLLSKDLLR 329
>gi|222641764|gb|EEE69896.1| hypothetical protein OsJ_29731 [Oryza sativa Japonica Group]
Length = 809
Score = 181 bits (459), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 124/296 (41%), Positives = 160/296 (54%), Gaps = 54/296 (18%)
Query: 156 LNSSVAEFSADPGFAERAARFSRFGSRSFNGRSTGQFVPNHNPDQFG-LSRSNNNPNPMT 214
L + F D GF ERAAR + FG G G D FG + + +
Sbjct: 471 LQQGLGHFPVDSGFIERAARSTCFGGGMMAGGPYGA-ADQAMGDAFGGTAEGLMDHHRNV 529
Query: 215 ANEKLPRVSSS-----PSLKVLGSQAQATGNKSPQDR---SELANSQEESSVSEQVPNDF 266
N+K + + PS +V G + G+ S + R + Q SS +P+D
Sbjct: 530 GNDKAEEFAGNGHDEVPSSEVAGGDCSSKGSDSKKRRRPNEVMGTDQVHSS---NLPSD- 585
Query: 267 NSRKRKAVSKGKGKETAASPSVNNTTKVAEANASESSKNKRCKPNEGKANGNGAVKAEDE 326
S SK KG+E+ SP+ N K A E+S++++
Sbjct: 586 -SANESVHSKDKGEES--SPATTNGGKSKGKGAKETSESQK------------------- 623
Query: 327 GDDKQAKANNAKPPEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCN 386
++YIHVRARRGQAT+SHSLAER+RREKISERMKLLQDLVPGC+
Sbjct: 624 -----------------EEYIHVRARRGQATNSHSLAERLRREKISERMKLLQDLVPGCS 666
Query: 387 KVTGKALMLDEIINYVQSLQRQVEFLSMKLASVNTRLELNVDALMSKDIYQ-PNKP 441
KVTGKA+MLDEIINYVQSLQRQVEFLSMKLA+VN RL+LN++ L+SKD+ + P P
Sbjct: 667 KVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDLNIEGLLSKDLLRFPGVP 722
>gi|115479723|ref|NP_001063455.1| Os09g0474100 [Oryza sativa Japonica Group]
gi|50726625|dbj|BAD34345.1| TA1 protein-like [Oryza sativa Japonica Group]
gi|113631688|dbj|BAF25369.1| Os09g0474100 [Oryza sativa Japonica Group]
gi|215768249|dbj|BAH00478.1| unnamed protein product [Oryza sativa Japonica Group]
gi|323388941|gb|ADX60275.1| bHLH- transcription factor [Oryza sativa Japonica Group]
Length = 428
Score = 181 bits (459), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 122/293 (41%), Positives = 158/293 (53%), Gaps = 48/293 (16%)
Query: 156 LNSSVAEFSADPGFAERAARFSRFGSRSFNGRSTGQFVPNHNPDQFG-LSRSNNNPNPMT 214
L + F D GF ERAAR + FG G G D FG + + +
Sbjct: 90 LQQGLGHFPVDSGFIERAARSTCFGGGMMAGGPYGA-ADQAMGDAFGGTAEGLMDHHRNV 148
Query: 215 ANEKLPRVSSS-----PSLKVLGSQAQATGNKSPQDRSELANSQEESSVSEQVPNDFNSR 269
N+K + + PS +V G + G+ S + R + S +P+D S
Sbjct: 149 GNDKAEEFAGNGHDEVPSSEVAGGDCSSKGSDSKKRRRPNEVMGTDQVHSSNLPSD--SA 206
Query: 270 KRKAVSKGKGKETAASPSVNNTTKVAEANASESSKNKRCKPNEGKANGNGAVKAEDEGDD 329
SK KG+E+ SP+ N K A E+S++++
Sbjct: 207 NESVHSKDKGEES--SPATTNGGKSKGKGAKETSESQK---------------------- 242
Query: 330 KQAKANNAKPPEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVT 389
++YIHVRARRGQAT+SHSLAER+RREKISERMKLLQDLVPGC+KVT
Sbjct: 243 --------------EEYIHVRARRGQATNSHSLAERLRREKISERMKLLQDLVPGCSKVT 288
Query: 390 GKALMLDEIINYVQSLQRQVEFLSMKLASVNTRLELNVDALMSKDIYQ-PNKP 441
GKA+MLDEIINYVQSLQRQVEFLSMKLA+VN RL+LN++ L+SKD+ + P P
Sbjct: 289 GKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDLNIEGLLSKDLLRFPGVP 341
>gi|15222679|ref|NP_173950.1| transcription factor bHLH76 [Arabidopsis thaliana]
gi|42571645|ref|NP_973913.1| transcription factor bHLH76 [Arabidopsis thaliana]
gi|75308803|sp|Q9C670.1|BH076_ARATH RecName: Full=Transcription factor bHLH76; AltName: Full=Basic
helix-loop-helix protein 76; Short=AtbHLH76; Short=bHLH
76; AltName: Full=Transcription factor EN 83; AltName:
Full=bHLH transcription factor bHLH076
gi|12321176|gb|AAG50678.1|AC079829_11 bHLH transcription factor GBOF-1, putative [Arabidopsis thaliana]
gi|26449804|dbj|BAC42025.1| putative transcription factor bHLH076 [Arabidopsis thaliana]
gi|28950949|gb|AAO63398.1| At1g26260 [Arabidopsis thaliana]
gi|332192546|gb|AEE30667.1| transcription factor bHLH76 [Arabidopsis thaliana]
gi|332192547|gb|AEE30668.1| transcription factor bHLH76 [Arabidopsis thaliana]
Length = 390
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 125/320 (39%), Positives = 168/320 (52%), Gaps = 79/320 (24%)
Query: 144 LNLPMSLGNSMPLNSSVAEFSADPGFAERAARFSRFGSRSFNGRSTGQFVPNHN------ 197
+++P+ +G +M A+F AD GF ERAA+FS FG G+ + N
Sbjct: 64 IDIPLEMGWNM------AQFPADSGFIERAAKFSFFG--------CGEMMMNQQQSSLGV 109
Query: 198 PDQFGL--------SRSNNNPNPMTANEKLPRVSSSPSLKVLGSQAQATGNKSPQDRSEL 249
PD GL S S + P+T KL + ++ N S +S
Sbjct: 110 PDSTGLFLQDTQIPSGSKLDNGPLTDASKLVK-------------ERSINNVSEDSQSSG 156
Query: 250 ANSQEESSVSEQVPNDFNSRKRKAVSKGKGKETAASPSVNNTTKVAEANASESSKNKRCK 309
N +++ + F+S+KRK + K + E K K +
Sbjct: 157 GNGHDDAKCGQTSSKGFSSKKRKRIGK-------------------DCEEEEDKKQKDEQ 197
Query: 310 PNEGKANGNGAVKAEDEGDDKQAKANNAK-PPEPPKD-YIHVRARRGQATDSHSLAERVR 367
AN K N+ K P + KD YIH+RARRGQAT+SHSLAERVR
Sbjct: 198 SPTSNAN----------------KTNSEKQPSDSLKDGYIHMRARRGQATNSHSLAERVR 241
Query: 368 REKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMKLASVNTRLELNV 427
REKISERMK LQDLVPGC+KVTGKA+MLDEIINYVQSLQ Q+EFLSMKL++VN L+ N+
Sbjct: 242 REKISERMKFLQDLVPGCDKVTGKAVMLDEIINYVQSLQCQIEFLSMKLSAVNPVLDFNL 301
Query: 428 DALMSKDIYQPNKP-LPHSI 446
++L++KD Q + P PH++
Sbjct: 302 ESLLAKDALQSSAPTFPHNM 321
>gi|290767965|gb|ADD60674.1| putative TA1 protein [Oryza granulata]
Length = 430
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 124/295 (42%), Positives = 160/295 (54%), Gaps = 42/295 (14%)
Query: 156 LNSSVAEFSADPGFAERAARFSRFGSRSFNGRSTGQFVPNHNPDQFGLSRSNNNPNPMTA 215
L++S+ F+A+ GF + AA F +NG + G + + P L N P +
Sbjct: 76 LSASLPPFAANSGFVDSAAGFP-----CYNGGNLGAMINHSFPSTQPLGDFQNGIEPCSE 130
Query: 216 NEKLPRVSSSPSLKVLGSQAQATGNKSPQDRSELANSQEESSVSEQVPNDFN-------- 267
E + S K TG K Q +E+ ++ + SS P
Sbjct: 131 IEAI----ESEGCK----NVSLTGEKQ-QGDAEMTHAVDSSSKELSKPECVGGAGRDEGT 181
Query: 268 ----SRKRK-AVSKGKGKETAASPSVNNTTKVAEANASESSKNKRCKPNEGKANGNGAVK 322
S+KRK ++ G K + + E + KR GK++
Sbjct: 182 RVSCSKKRKRSIQHGGVKHVEGGEQLATMAAAQKNENDEKYEPKRSSVAPGKSS------ 235
Query: 323 AEDEGDDKQAKANNAKPPEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLV 382
KQAK N P E +YIHVRARRGQAT+SHSLAERVRREKISERMK LQDLV
Sbjct: 236 ------RKQAKDNAGSPKE---EYIHVRARRGQATNSHSLAERVRREKISERMKYLQDLV 286
Query: 383 PGCNKVTGKALMLDEIINYVQSLQRQVEFLSMKLASVNTRLELNVDALMSKDIYQ 437
PGC+KVTGKA+MLDEIINYVQSLQRQVEFLSMKLASVN L+LN+++++SKDI+Q
Sbjct: 287 PGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLASVNPTLDLNIESILSKDIFQ 341
>gi|351720977|ref|NP_001237962.1| uncharacterized protein LOC100306638 [Glycine max]
gi|255629145|gb|ACU14917.1| unknown [Glycine max]
Length = 240
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 101/170 (59%), Positives = 123/170 (72%), Gaps = 9/170 (5%)
Query: 273 AVSKGKGKETAASPSVNNTTKVAEANASESSKNKRCKPNEGKANGNGAVKAEDE----GD 328
A + KGK++ A+ V ++T A + ++S NKR K G + N KAE E G
Sbjct: 35 ATAPTKGKDSTAADEVLSSTTTANLSNNDSGSNKRMKVG-GSSFENDGFKAEAEASSVGG 93
Query: 329 DKQAKANNAKPPEPPK-DYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNK 387
+K ++ +N KP E PK DYIHVRARRGQATDSHSLAER RREKISERMK+LQDL PGCNK
Sbjct: 94 NKSSEQSN-KPCEAPKPDYIHVRARRGQATDSHSLAERARREKISERMKILQDLAPGCNK 152
Query: 388 VTGKALMLDEIINYVQSLQRQVEFLSMKLASVNTRLELN--VDALMSKDI 435
V GKAL+LDEIINY+QSLQRQVEFLSMKL +VN+R+ N +D SKD+
Sbjct: 153 VIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNTNPTIDGFPSKDV 202
>gi|357158920|ref|XP_003578282.1| PREDICTED: transcription factor bHLH49-like [Brachypodium
distachyon]
Length = 415
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 86/128 (67%), Positives = 106/128 (82%), Gaps = 8/128 (6%)
Query: 318 NGAVKAEDEGDDK--------QAKANNAKPPEPPKDYIHVRARRGQATDSHSLAERVRRE 369
N +V ++D+G++ ++K AK +DYIHVRARRGQAT+SHSLAER+RRE
Sbjct: 202 NESVHSKDKGEESSPATTTTGKSKGKGAKESSEKEDYIHVRARRGQATNSHSLAERLRRE 261
Query: 370 KISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMKLASVNTRLELNVDA 429
KISERMKLLQDLVPGC+KVTGKA+MLDEIINYVQSLQRQVEFLSMKLA+VN RL+LN++
Sbjct: 262 KISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDLNIEG 321
Query: 430 LMSKDIYQ 437
L+SKD+ +
Sbjct: 322 LLSKDLLR 329
>gi|33339703|gb|AAQ14331.1|AF283506_1 MYC1 [Catharanthus roseus]
Length = 271
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 106/191 (55%), Positives = 125/191 (65%), Gaps = 22/191 (11%)
Query: 250 ANSQEESSVSEQVPN-DFNSRKRKAVSKGKGKETAASPSVNNTTKVAEANASESSKNKRC 308
N + V +Q PN + R+R+ + ++A S +N +ANA NKR
Sbjct: 63 VNRDHDPMVMDQAPNLNGGVRRRR-----EDDDSAKGVSTSN-----DANAMNEGDNKRL 112
Query: 309 KPNEGKANGNGAVKAEDEGDDKQAKANNAKPPEPPK-DYIHVRARRGQATDSHSLAERVR 367
K G +N N KAE E AKP EPPK DYIHVRARRGQATDSHSLAER R
Sbjct: 113 KT--GGSNENHESKAEGE--------ETAKPAEPPKQDYIHVRARRGQATDSHSLAERAR 162
Query: 368 REKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMKLASVNTRLELNV 427
REKISERMK+LQDLVPGCNKV GKAL+LDEIINY+QSLQRQVEFLSMKL +VN+RL +
Sbjct: 163 REKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRLSPGI 222
Query: 428 DALMSKDIYQP 438
+ SK+ QP
Sbjct: 223 EGFPSKEFGQP 233
>gi|224105381|ref|XP_002313791.1| predicted protein [Populus trichocarpa]
gi|222850199|gb|EEE87746.1| predicted protein [Populus trichocarpa]
Length = 439
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 129/306 (42%), Positives = 169/306 (55%), Gaps = 38/306 (12%)
Query: 274 VSKGKGKETAASPSVNNTTKVAEANASESSKNKRCK--PNEGKAN--------------- 316
+S G G+E++ V+N ++ +A E +++KR K EG++
Sbjct: 146 ISSGVGRESSKKRKVDNKQNNSKVDAEEDTRDKRIKGCAEEGESKITEKNNNKNSRNNNT 205
Query: 317 --GNGAVKAEDEGDDKQAKANNAKPPEPPK-DYIHVRARRGQATDSHSLAERVRREKISE 373
N + K G+ K +N+K E K DYIHVRARRGQATDSHSLAERVRREKISE
Sbjct: 206 NKNNNSNKESSAGNSK----DNSKVTEVQKPDYIHVRARRGQATDSHSLAERVRREKISE 261
Query: 374 RMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMKLASVNTRLELNVDALMSK 433
RMK LQDLVPGCNK+TGKA MLDEIINYVQSLQRQVEFLSMKLA+VN RL+ N D L ++
Sbjct: 262 RMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRLDFNFDNLFAR 321
Query: 434 DIY-QPNKPLPHSIFQIDSSASAFFSHQP-QQNPALHGNISNGTMTQCPVDPLDNALCRN 491
+ + + P D + A+ P QQ + GT DP D L R
Sbjct: 322 EAFPACSVNFPTIGMSSDMTNPAYLQFNPAQQQLVTCCGLDMGT------DPPDMGLKRT 375
Query: 492 LSMQLPQLEQFTETIPQFQNF----GEDDLQSIVQMGFGQNPNSETSLQSQSFHGSNQAP 547
S E F ++ Q + DLQ++ + F Q +TS +Q F GS +A
Sbjct: 376 TSSPESIPETFLDSSCFTQAHPPPAWDADLQNLYNVAFDQ--GRQTSFPTQPFTGSIEAS 433
Query: 548 HMKAEL 553
++K E+
Sbjct: 434 NLKMEM 439
>gi|449533331|ref|XP_004173629.1| PREDICTED: transcription factor bHLH63-like [Cucumis sativus]
Length = 456
Score = 179 bits (455), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 114/228 (50%), Positives = 143/228 (62%), Gaps = 16/228 (7%)
Query: 336 NAKPPEPPK-DYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALM 394
N+K E K DYIHVRARRGQATDSHSLAER RREKISERMK LQDLVPGCNK+TGKA M
Sbjct: 235 NSKASEVQKPDYIHVRARRGQATDSHSLAERARREKISERMKYLQDLVPGCNKITGKAGM 294
Query: 395 LDEIINYVQSLQRQVEFLSMKLASVNTRLELNVDALMSKDIYQPNKPLPHSIFQIDSSAS 454
LDEIINYVQSLQRQVEFLSMKLA+VN RL+ NVD L +K+++ P+ + S
Sbjct: 295 LDEIINYVQSLQRQVEFLSMKLAAVNPRLDFNVDDLFNKEVFPPSCTAANF-----PSVG 349
Query: 455 AFFSHQPQQNPALHGNISNGTMTQCP-----VDPLDNALCRNLSMQLPQLEQFTET--IP 507
S + L N +N M C ++ AL R +S + E F ++ +
Sbjct: 350 GMSSEMTDPSSYLQFNPNNQQMDSCCGLEMGINTSHVALRRTISAPVSFPENFLDSSCLT 409
Query: 508 QFQ-NFGED-DLQSIVQMGFGQNPNSETSLQSQSFHGSNQAPHMKAEL 553
QFQ + G D DLQ++ +GF Q S + S + GS +A ++K E+
Sbjct: 410 QFQPSSGWDVDLQNMYNVGFDQG-RSSNAFSSHPYTGSIEAGNIKMEM 456
>gi|218202318|gb|EEC84745.1| hypothetical protein OsI_31742 [Oryza sativa Indica Group]
Length = 428
Score = 179 bits (454), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 121/293 (41%), Positives = 157/293 (53%), Gaps = 48/293 (16%)
Query: 156 LNSSVAEFSADPGFAERAARFSRFGSRSFNGRSTGQFVPNHNPDQFG-LSRSNNNPNPMT 214
L + F D GF ERAAR + FG G G D FG + + +
Sbjct: 90 LQQGLGHFPVDSGFIERAARSTCFGGGMMAGGPYGA-ADQAMGDAFGGTAEGLMDHHRNV 148
Query: 215 ANEKLPRVSSS-----PSLKVLGSQAQATGNKSPQDRSELANSQEESSVSEQVPNDFNSR 269
N+K + + PS +V G + G+ S + R + S +P+D S
Sbjct: 149 GNDKAEEFAGNGHDEVPSSEVAGGDCSSKGSDSKKRRRPNEVMGTDQVHSSNLPSD--SA 206
Query: 270 KRKAVSKGKGKETAASPSVNNTTKVAEANASESSKNKRCKPNEGKANGNGAVKAEDEGDD 329
SK KG+E+ SP+ N K A E+ ++++
Sbjct: 207 NESVHSKDKGEES--SPATTNGGKSKGKGAKETYESQK---------------------- 242
Query: 330 KQAKANNAKPPEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVT 389
++YIHVRARRGQAT+SHSLAER+RREKISERMKLLQDLVPGC+KVT
Sbjct: 243 --------------EEYIHVRARRGQATNSHSLAERLRREKISERMKLLQDLVPGCSKVT 288
Query: 390 GKALMLDEIINYVQSLQRQVEFLSMKLASVNTRLELNVDALMSKDIYQ-PNKP 441
GKA+MLDEIINYVQSLQRQVEFLSMKLA+VN RL+LN++ L+SKD+ + P P
Sbjct: 289 GKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDLNIEGLLSKDLLRFPGVP 341
>gi|255540845|ref|XP_002511487.1| DNA binding protein, putative [Ricinus communis]
gi|223550602|gb|EEF52089.1| DNA binding protein, putative [Ricinus communis]
Length = 275
Score = 179 bits (454), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 109/193 (56%), Positives = 127/193 (65%), Gaps = 16/193 (8%)
Query: 248 ELANSQEESSVSEQVPNDFNSRKRKAVSKGKGKETAASPSVNNTTKVAEANASESSKNKR 307
E S EES+V+EQ RKR+ S + S + + N + S KR
Sbjct: 51 ERDGSVEESTVTEQSVG--GGRKRRDFS-------SEDESSKMVSTSSSGNELQDSNVKR 101
Query: 308 CKPNEGKANGNGAVKAEDEG---DDKQAKANNAKPPEPPK-DYIHVRARRGQATDSHSLA 363
K + G N NG KAE E +DK A N+K EPPK DYIHVRARRGQATDSHSLA
Sbjct: 102 MKIS-GSQNENGKSKAEVEASSANDKNAAEQNSKISEPPKQDYIHVRARRGQATDSHSLA 160
Query: 364 ERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMKLASVNTRL 423
ER RREKISERMK+LQDLVPGCNKV GKAL+LDEIINY+QSLQRQVEFLSMKL +VN+R+
Sbjct: 161 ERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRM 220
Query: 424 ELN--VDALMSKD 434
+N V+ KD
Sbjct: 221 GMNPTVEGFHPKD 233
>gi|193848525|gb|ACF22714.1| putative TA1 protein [Brachypodium distachyon]
Length = 428
Score = 179 bits (453), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 101/213 (47%), Positives = 133/213 (62%), Gaps = 14/213 (6%)
Query: 260 EQVPNDFNSRKRKAVSKGKGKETAASPSVNNTTKVAEANASESSKNKRCKPNEGKANGNG 319
++ P+ +++KRK + +G + S T VA+ K+ +P
Sbjct: 187 DEGPSVSSAKKRKRSGQDRGVKHVQEGSQQLATVVAKQEKDNDEKDGPKRP--------- 237
Query: 320 AVKAEDEGDDKQAKANNAKPPEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQ 379
+ A + + KQ + N+ P E DYIH+RAR GQAT+SHSLAERVRREKISERMK LQ
Sbjct: 238 -ISASRKSNGKQTEDNSDAPKE---DYIHIRARSGQATNSHSLAERVRREKISERMKFLQ 293
Query: 380 DLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMKLASVNTRLELNVDALMSKDIYQPN 439
DLVPGC+KV GKA+MLDEIINYVQSLQRQVEFLSMKL++VN L+ N++ ++SKD +Q
Sbjct: 294 DLVPGCSKVIGKAVMLDEIINYVQSLQRQVEFLSMKLSTVNPALDFNIERILSKDFFQSQ 353
Query: 440 KPLPHSIFQIDSSASAFFSHQPQQN-PALHGNI 471
S F S F HQP+ + ALHG +
Sbjct: 354 GTPASSAFGFLPENSHHFLHQPKHSQAALHGIV 386
>gi|414885894|tpg|DAA61908.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 434
Score = 179 bits (453), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 123/293 (41%), Positives = 159/293 (54%), Gaps = 38/293 (12%)
Query: 156 LNSSVAEFSADPGFAERAARFSRFGSRSFNGRSTGQFVP-NHNPDQFGLSRS-----NNN 209
L +A F D GF ERAAR S FG G +H P S S ++
Sbjct: 85 LPQGLAHFPVDSGFIERAARASCFGGGGGGGVMAAFGAAADHQPMNSAFSGSSEALLDHQ 144
Query: 210 PNPMTANEKLPRVSSSPSLKVLGSQAQATGNKSPQDRSELANSQEESSVSEQVPNDFNSR 269
+++ P + + VL S+A A G+ S + S+ S + PN+
Sbjct: 145 RTKDGSDKGEPELGRNGHDGVLSSEAAAAGDCSSKGTSD--------SKKRRRPNE---- 192
Query: 270 KRKAVSKGKGKETAASPSVNNTTKVAEANASESSKNKRCKPNEGKANGNGAVKAEDEGDD 329
V G +++ P+ + V + E S GK+ G GA + +
Sbjct: 193 ----VMGGDQVQSSNLPADSANESVHSKDKGEESSLATTTTGPGKSKGKGARETSES--- 245
Query: 330 KQAKANNAKPPEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVT 389
+DYIHVRARRGQAT+SHSLAER+RREKISERMKLLQDLVPGC+KVT
Sbjct: 246 ------------QKEDYIHVRARRGQATNSHSLAERLRREKISERMKLLQDLVPGCSKVT 293
Query: 390 GKALMLDEIINYVQSLQRQVEFLSMKLASVNTRLELNVDALMSKDIYQ-PNKP 441
GKA+MLDEIINYVQSLQRQVEFLSMKLA+VN RL+LN++ L+SKD+ + P P
Sbjct: 294 GKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDLNIEGLLSKDLLRFPGVP 346
>gi|168023966|ref|XP_001764508.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684372|gb|EDQ70775.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 679
Score = 179 bits (453), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 138/348 (39%), Positives = 177/348 (50%), Gaps = 40/348 (11%)
Query: 160 VAEFSADPGFAERAARFSRFGSRSFNGRSTGQFVPN--HNPDQ-FGLSRSNNNPNPMTAN 216
+A+ ++D F ERAA+FS FG+R TG++VP P F + + + P +
Sbjct: 176 LAQITSDSAFVERAAKFSTFGTR------TGEYVPEMLQRPAAGFVAATTKSVPGDVREE 229
Query: 217 EKLPRVSSSPS----LKVLGSQAQATGNKSPQDRSELANSQEE---SSVSEQVPNDFNSR 269
K + + P L+ + ++ T + + E A E SS +E P
Sbjct: 230 SKCIAIDTIPGKQSVLEAVEGASKVTVDAISNIKVEAAAFHENTNISSCAELQPGSQGEI 289
Query: 270 KRKAVSKGKGKETAASPSVNNTTKVA------------EANASESSKNKRCKPNEGKANG 317
+S + P+ N K + E+SK KRCK + K++
Sbjct: 290 SPDTISPARSTPPQDEPASRNKRKKPSTIDNDLASPDPKVGDVENSKAKRCKGEDTKSDC 349
Query: 318 NGAVKAEDEGDDKQA------KANNAKPPEPPK-DYIHVRARRGQATDSHSLAERVRREK 370
G + + + K NN K E K DYIHVRARRGQATDSHSLAERVRREK
Sbjct: 350 KGERSSSEISSESAGSPKVPQKENNQKAKEFSKQDYIHVRARRGQATDSHSLAERVRREK 409
Query: 371 ISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMKLASVN----TRLELN 426
ISERMK LQDLVPGC KVTGKA+MLDEIINYVQSLQRQVE LSMK+ASVN RL L
Sbjct: 410 ISERMKYLQDLVPGCRKVTGKAVMLDEIINYVQSLQRQVESLSMKVASVNPTHSGRLTLE 469
Query: 427 VDALMSKDIYQPNKPLPHSIFQIDSSASAFFSHQPQQNPALHGNISNG 474
L ++DI Q H +A+AF SH QQ L N+ G
Sbjct: 470 -SRLSNEDIIQSQLSSIHGSSDSSINAAAFGSHHLQQQSELLLNVYCG 516
>gi|326496517|dbj|BAJ94720.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 261
Score = 178 bits (452), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 112/255 (43%), Positives = 151/255 (59%), Gaps = 33/255 (12%)
Query: 293 KVAEANASESSKNKRCKPNEGKANGNGAVKAEDEGDDKQAKANNAKPPEPPKDYIHVRAR 352
KV E A+ ++ + G+ G V +K+ EPP+DY+HVRAR
Sbjct: 22 KVEEEAATATASDGSAGGERGRKQAKGKV----------SKSKQPAADEPPRDYVHVRAR 71
Query: 353 RGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFL 412
RGQATDSHSLAERVRREKI+ +MK+LQDLVPGCNKV GKALMLDEIINYVQSLQ+QVEFL
Sbjct: 72 RGQATDSHSLAERVRREKITLKMKMLQDLVPGCNKVIGKALMLDEIINYVQSLQQQVEFL 131
Query: 413 SMKLASVNTRLELN-VDALMSKDIYQPNKPLPHSIFQIDSSASAFFSHQPQQNPA-LHGN 470
SMKL++VN +L+ + + L+ KD+ Q P ++F ++S+ + + P + A L+
Sbjct: 132 SMKLSTVNPQLDFDTLSNLLHKDMNQALGPSASTVFPLESAGTVY----PLCDQADLYQP 187
Query: 471 ISNGTMT-QCPVDPLDNALCRNLSMQLPQLEQFTETIPQFQNFGEDDLQSIVQMGFGQN- 528
S+G M QC + LD M LP Q+ Q Q+F E Q+ + M GQ+
Sbjct: 188 FSSGAMENQCSMGLLD--------MALPHAPQYPFQKQQ-QDFWEASAQNALHMEHGQSQ 238
Query: 529 ------PNSETSLQS 537
PN + LQ+
Sbjct: 239 ENAGSAPNFDGQLQA 253
>gi|253761888|ref|XP_002489318.1| hypothetical protein SORBIDRAFT_0010s017130 [Sorghum bicolor]
gi|241946966|gb|EES20111.1| hypothetical protein SORBIDRAFT_0010s017130 [Sorghum bicolor]
Length = 324
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 106/195 (54%), Positives = 126/195 (64%), Gaps = 13/195 (6%)
Query: 243 PQDRSELANSQEESSVSEQVPNDFNSRKRKAVSKGKGKETAASPSVNNTTKVAEANASES 302
P R E + S+ +D RKRKA S GK K T A + +
Sbjct: 140 PGLRWEALTGAVKQHASDGSCSDGPCRKRKA-SGGKSKAKVV------VTPAAPKSRAPE 192
Query: 303 SKNKRCKPNEGKANGNGAVK---AEDEGDDKQAKANNAKPPEPPKDYIHVRARRGQATDS 359
++ K+CK + + + K E D+ K A EP KDYIHVRARRGQATDS
Sbjct: 193 TRAKKCKLSTDVGHDDEEQKPAAGEAWHDNSNGKEVAA---EPSKDYIHVRARRGQATDS 249
Query: 360 HSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMKLASV 419
HSLAERVRREKISERMKLLQDLVPGC+KVTGKA+MLDEIINYVQSLQRQVEFLSMKL++V
Sbjct: 250 HSLAERVRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLSTV 309
Query: 420 NTRLELNVDALMSKD 434
N RL+L+VD+ + KD
Sbjct: 310 NPRLKLDVDSCIPKD 324
>gi|356545203|ref|XP_003541034.1| PREDICTED: transcription factor bHLH63-like [Glycine max]
Length = 402
Score = 177 bits (448), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 110/234 (47%), Positives = 140/234 (59%), Gaps = 19/234 (8%)
Query: 330 KQAKANNAKPPEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVT 389
K ++ N KP DYIHVRARRGQATDSHSLAERVRREKISERMK LQDL+PGCNKV
Sbjct: 178 KGSEVQNQKP-----DYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLIPGCNKVA 232
Query: 390 GKALMLDEIINYVQSLQRQVEFLSMKLASVNTRLELNVDALMSKDIYQ------PNKPLP 443
GKA MLDEIINYVQSLQRQVEFLSMKLA+VN RL+ N+D L +K+++ PN +P
Sbjct: 233 GKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRLDFNIDELFAKEVFPSCAQSFPNIGIP 292
Query: 444 HSIFQIDSSASAFFSHQPQQNPALHGNISNGTMTQCPVDPLDNALCRNLSMQLPQL---- 499
S I ++ S + QQ + G + N P L + ++ LP+
Sbjct: 293 -SDMSISNNPSYLQFNSAQQLVSCCGGLINSMGISPPNMGLRTNIISTSTVPLPETFLDS 351
Query: 500 EQFTETIPQFQNFGEDDLQSIVQMGFGQNPNSETSLQSQSFHGSNQAPHMKAEL 553
F + +P N+ D QS+ + F Q + S Q F G +A ++K E+
Sbjct: 352 SCFAQILPS-SNWEGGDFQSLYNVAFDQGRTA--SFPPQPFTGLVEASNLKMEM 402
>gi|356577684|ref|XP_003556954.1| PREDICTED: transcription factor bHLH74-like [Glycine max]
Length = 435
Score = 177 bits (448), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 113/239 (47%), Positives = 144/239 (60%), Gaps = 16/239 (6%)
Query: 252 SQEESSV-SEQVPNDFNSRKRKAVSKGKGKETAASPSVN---NTTKVAEANASESSKNKR 307
SQ E S+ E+ P S R+ +G + SP+ N + K + AS+ SK
Sbjct: 171 SQVEDSIPEEEAPGSAPSGNRR--KRGLDHNSTFSPNKNAEGDAVKDSPGKASDGSKEHE 228
Query: 308 CKPNEGKANGNGAVKAEDEGDDKQAKANN-AKPPEPPKD-YIHVRARRGQATDSHSLAER 365
+P K N + KQAK NN ++ E PK+ +IHVRARRGQAT+SHSLAER
Sbjct: 229 KRP---KVEQNNGADVRGKQSVKQAKDNNNSQSGEAPKENFIHVRARRGQATNSHSLAER 285
Query: 366 VRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMKLASVNTRLEL 425
VRREKISERM+LLQ+LVPGCNK+TGKA+MLDEIINYVQSLQ+QVEFLSMKLA+VN L
Sbjct: 286 VRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSMKLATVNPELNF 345
Query: 426 NVDALMSKDIYQPNKPLPHSIFQIDSSASAFFSHQPQQNPALHGNISNGTMTQCPVDPL 484
+VD ++SKDI Q + H I + S N + HG ++ + T PL
Sbjct: 346 DVDRILSKDILQSR--IGHG---IGAYGPGINSSHTFPNGSFHGTLAGMSSTSSQFPPL 399
>gi|356552284|ref|XP_003544498.1| PREDICTED: transcription factor bHLH74-like [Glycine max]
Length = 429
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 84/109 (77%), Positives = 98/109 (89%), Gaps = 1/109 (0%)
Query: 330 KQAKANNAKPPEPPKD-YIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKV 388
KQAK NN++ E PK+ +IHVRARRGQAT+SHSLAERVRREKISERM+LLQ+LVPGCNK+
Sbjct: 243 KQAKDNNSQSGEAPKENFIHVRARRGQATNSHSLAERVRREKISERMRLLQELVPGCNKI 302
Query: 389 TGKALMLDEIINYVQSLQRQVEFLSMKLASVNTRLELNVDALMSKDIYQ 437
TGKA+MLDEIINYVQSLQ+QVEFLSMKLA+VN L +VD ++SKDI Q
Sbjct: 303 TGKAVMLDEIINYVQSLQQQVEFLSMKLATVNPELNFDVDRILSKDILQ 351
>gi|449509268|ref|XP_004163540.1| PREDICTED: transcription factor bHLH74-like [Cucumis sativus]
Length = 402
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 108/234 (46%), Positives = 141/234 (60%), Gaps = 28/234 (11%)
Query: 293 KVAEANASESSKNKRCKPNEGKANGNGAVKAEDEGDDKQAKANNAKPPEPPKD-YIHVRA 351
K+ + + +SS + K E + N G + + G KQ K ++ E PK+ YIHVRA
Sbjct: 177 KLKKDVSGDSSSTQEEKNAEMEQNLGGNSRGKSTG--KQTKEKSSNSAEAPKENYIHVRA 234
Query: 352 RRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEF 411
RRGQAT+SHSLAERVRREKISERM+LLQ+LVPGCNK+TGKA+MLDEIINYVQSLQ+QVEF
Sbjct: 235 RRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEF 294
Query: 412 LSMKLASVNTRLELNVDALMSKDIYQPNKPLPHSIFQIDSSASAFFSHQPQQNPALHGNI 471
LSMKLA+VN + ++++ ++SKDI+ + ++ D SA P +
Sbjct: 295 LSMKLATVNPDVNVDIERILSKDIFNI-RGSSGNVLGFDPGLSAVSPVPPHRMFQFQ--- 350
Query: 472 SNGTMTQCPVDPLDNALCRNLSMQLPQLEQFTETIPQFQNFGEDDLQSIVQMGF 525
GTM+ P S Q P P Q E DLQS++QMGF
Sbjct: 351 --GTMSSMPTT----------STQFP---------PMPQTMLESDLQSLLQMGF 383
>gi|255543699|ref|XP_002512912.1| conserved hypothetical protein [Ricinus communis]
gi|223547923|gb|EEF49415.1| conserved hypothetical protein [Ricinus communis]
Length = 444
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 111/230 (48%), Positives = 141/230 (61%), Gaps = 15/230 (6%)
Query: 335 NNAKPPEPPK-DYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKAL 393
+N+K E K DYIHVRARRGQATDSHSLAERVRREKISERMK LQDLVPGCNK+TGKA
Sbjct: 219 DNSKVTEVQKPDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAG 278
Query: 394 MLDEIINYVQSLQRQVEFLSMKLASVNTRLELNVDALMSKDIYQPNKP-LPHSIFQIDSS 452
MLDEIINYVQSLQRQVEFLSMKLA+VN RL+ N+D L++K+ + P P D +
Sbjct: 279 MLDEIINYVQSLQRQVEFLSMKLAAVNPRLDFNIDNLIAKETFPPCPTNFPAIGLSSDMT 338
Query: 453 ASAFFSHQPQQNPALHGNISNGTMTQCPVD-----PLDNALCRNLS--MQLPQLEQFTET 505
A+ P Q +T C +D P D + R +S + +P+ +
Sbjct: 339 NPAYLQFNPVQQQQQQQQ-QQQLVTCCGLDMGINNP-DMGIRRTISAPVSIPESYIDSSC 396
Query: 506 IPQFQ--NFGEDDLQSIVQMGFGQNPNSETSLQSQSFHGSNQAPHMKAEL 553
Q Q + + DLQ++ + F Q TS +Q F G+ A ++K E+
Sbjct: 397 FNQIQSSSTWDADLQNLYNVAFDQ--GRSTSFPTQPFTGAIDAGNLKMEM 444
>gi|242045042|ref|XP_002460392.1| hypothetical protein SORBIDRAFT_02g027430 [Sorghum bicolor]
gi|241923769|gb|EER96913.1| hypothetical protein SORBIDRAFT_02g027430 [Sorghum bicolor]
Length = 438
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 81/99 (81%), Positives = 93/99 (93%), Gaps = 1/99 (1%)
Query: 344 KDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQ 403
+DYIHVRARRGQAT+SHSLAER+RREKISERMKLLQDLVPGC+KVTGKA+MLDEIINYVQ
Sbjct: 251 EDYIHVRARRGQATNSHSLAERLRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQ 310
Query: 404 SLQRQVEFLSMKLASVNTRLELNVDALMSKDIYQ-PNKP 441
SLQRQVEFLSMKLA+VN RL+LN++ L+SKD+ + P P
Sbjct: 311 SLQRQVEFLSMKLATVNPRLDLNIEGLLSKDLLRFPGVP 349
>gi|108864345|gb|ABA93365.2| expressed protein [Oryza sativa Japonica Group]
Length = 508
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 171/482 (35%), Positives = 208/482 (43%), Gaps = 151/482 (31%)
Query: 131 ASCYTTPLNSPPKLNLPMSLGNSMPLNSSVAEFSADPGFAERAARFSRFGSRSFNGRSTG 190
ASCY+TP+ SP K + P+ S +A +AD AERAAR S + G
Sbjct: 93 ASCYSTPVGSPCKP------APAPPVPSLLA--AADAMIAERAARMSCLAAAGHGG---- 140
Query: 191 QFVPNHNPDQFGLSRSNNNPNPMTANEKLPRVSSSPSLKVLGSQAQATGNKSPQDRSELA 250
KL R +SS SL L A A G +L
Sbjct: 141 --------------------------GKLSRAASSQSL--LAETAAAGGVH------QLP 166
Query: 251 NSQEESSVSEQVPNDFNSRKRKA-VSKGKGKETAAS-------------PSVNNTTKVAE 296
S SS D RKRKA +K +GK+ A + S T+
Sbjct: 167 ASDGSSS-------DAPCRKRKAPCAKARGKDAATTIAKVLRLLSAPPLQSRRRTSPETM 219
Query: 297 ANASES----SKNKRCK------------PNEGKAN--GNGAVKAEDEGDDKQAKANNAK 338
N +S +K K+CK P G A GNG K D
Sbjct: 220 VNFPQSPEPGTKAKKCKLSADAAGDEDTKPVAGDAGHGGNGKGKVLDAAG---------- 269
Query: 339 PPEPPKDYIHVRARRGQATDSHSLAERV-------------------------------- 366
EPPKDYIHVRARRGQATDSHSLAERV
Sbjct: 270 --EPPKDYIHVRARRGQATDSHSLAERVKAAGIDAANHNFFFSSILAFADAIAAVFHLQV 327
Query: 367 RREKISERMKLLQDLVPGCNKV--------------TGKALMLDEIINYVQSLQRQVEFL 412
RREKISERMKLLQDLVPGCNKV TGKA+MLDEIINYVQSLQRQVEFL
Sbjct: 328 RREKISERMKLLQDLVPGCNKVAKFSQKINLNFTLVTGKAVMLDEIINYVQSLQRQVEFL 387
Query: 413 SMKLASVNTRLELNVDALMSKDIYQPNKPLPHSIFQIDSSASAFFSHQPQQNPALHGNIS 472
SMKL++VN +L+ +VD + KD Q + P+ + + +P + S
Sbjct: 388 SMKLSTVNPQLDFDVDNFIPKD--QASDPIMPAPLSLPPPPPPLSYSPEGASPGICYASS 445
Query: 473 NGTMTQCPVDP---LDNA--LCRNLSMQLPQLEQFTETIPQFQN-FGEDDLQSIVQMGFG 526
GT Q V L+ A + + +P L+ F Q + EDDLQS+VQMGF
Sbjct: 446 QGTAMQSVVTSTKHLETAPTFANHHVIPVPSLDGFHSAHSQAGSCMWEDDLQSVVQMGFR 505
Query: 527 QN 528
N
Sbjct: 506 GN 507
>gi|255558300|ref|XP_002520177.1| DNA binding protein, putative [Ricinus communis]
gi|223540669|gb|EEF42232.1| DNA binding protein, putative [Ricinus communis]
Length = 265
Score = 176 bits (445), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 96/155 (61%), Positives = 112/155 (72%), Gaps = 7/155 (4%)
Query: 289 NNTTKVAEA-----NASESSKNKRCKPNEGKANGNGAVKAEDEGDDKQAKANNAKPPEPP 343
+++TKV + NA S KR K + G + N K+E E + N +PPE P
Sbjct: 73 DDSTKVVSSSNGNGNAVNDSDAKRLKTS-GNLDENHDSKSEAEPSSGKHVEQNTQPPELP 131
Query: 344 K-DYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYV 402
K DYIHVRARRGQATDSHSLAER RREKISERMK+LQDLVPGCNKV GKAL+LDEIINY+
Sbjct: 132 KQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYI 191
Query: 403 QSLQRQVEFLSMKLASVNTRLELNVDALMSKDIYQ 437
QSLQRQVEFLSMKL +VNTR+ ++A SKD Q
Sbjct: 192 QSLQRQVEFLSMKLEAVNTRMTPGIEAFPSKDFGQ 226
>gi|449447083|ref|XP_004141299.1| PREDICTED: transcription factor bHLH74-like [Cucumis sativus]
Length = 249
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 108/234 (46%), Positives = 141/234 (60%), Gaps = 28/234 (11%)
Query: 293 KVAEANASESSKNKRCKPNEGKANGNGAVKAEDEGDDKQAKANNAKPPEPPKD-YIHVRA 351
K+ + + +SS + K E + N G + + G KQ K ++ E PK+ YIHVRA
Sbjct: 24 KLKKDVSGDSSSTQEEKNAEMEQNLGGNSRGKSTG--KQTKEKSSNSAEAPKENYIHVRA 81
Query: 352 RRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEF 411
RRGQAT+SHSLAERVRREKISERM+LLQ+LVPGCNK+TGKA+MLDEIINYVQSLQ+QVEF
Sbjct: 82 RRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEF 141
Query: 412 LSMKLASVNTRLELNVDALMSKDIYQPNKPLPHSIFQIDSSASAFFSHQPQQNPALHGNI 471
LSMKLA+VN + ++++ ++SKDI+ + ++ D SA P +
Sbjct: 142 LSMKLATVNPDVNVDIERILSKDIFNI-RGSSGNVLGFDPGLSAVSPVPPHRMFQFQ--- 197
Query: 472 SNGTMTQCPVDPLDNALCRNLSMQLPQLEQFTETIPQFQNFGEDDLQSIVQMGF 525
GTM+ P S Q P P Q E DLQS++QMGF
Sbjct: 198 --GTMSSMPTT----------STQFP---------PMPQTMLESDLQSLLQMGF 230
>gi|168063707|ref|XP_001783811.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162664693|gb|EDQ51403.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 164
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 100/170 (58%), Positives = 117/170 (68%), Gaps = 11/170 (6%)
Query: 277 GKGKETAAS-PSVNNTTKVAEANASESSKNKRCKPNEGKANGNGAVKAEDEGDD---KQA 332
GKGK + +S S +K EAN S K +R P + + + +E+ GD
Sbjct: 1 GKGKTSTSSFASDGKDSKSMEANEQTSLKRQRSGPVKAERSA-----SENSGDSVGPSSL 55
Query: 333 KANNAKPPEPPK-DYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGK 391
KA++ PK DYIHVRARRGQATDSHSLAERVRREKISERMK LQDLVPGC+KVTGK
Sbjct: 56 KASSKSVQNLPKQDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCSKVTGK 115
Query: 392 ALMLDEIINYVQSLQRQVEFLSMKLASVNTRLELNVDALMSKDIYQPNKP 441
A+MLDEIINYVQSLQRQ+EFLSMKLA+VN RL+ D L KD+ Q P
Sbjct: 116 AVMLDEIINYVQSLQRQIEFLSMKLAAVNPRLDYGFDVL-GKDLLQLRSP 164
>gi|356508360|ref|XP_003522925.1| PREDICTED: transcription factor bHLH63-like [Glycine max]
Length = 398
Score = 175 bits (443), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 114/230 (49%), Positives = 141/230 (61%), Gaps = 25/230 (10%)
Query: 336 NAKPPEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALML 395
N+K E P DYIHVRARRGQATDSHSLAERVRREKISERM LQDLVPGCNKVTGKA ML
Sbjct: 182 NSKASEKP-DYIHVRARRGQATDSHSLAERVRREKISERMNYLQDLVPGCNKVTGKAGML 240
Query: 396 DEIINYVQSLQRQVEFLSMKLASVNTRLELNVDALMSKDIYQ------PNKPLPHSIFQI 449
DEIINYVQSLQRQVEFLSMKLA+VN RL+ ++D L KD++ PN + + I
Sbjct: 241 DEIINYVQSLQRQVEFLSMKLAAVNPRLDFSMDDLFDKDVFPTCAANFPNIGMSSTSSDI 300
Query: 450 DSSASAFFSHQPQQNPALHGNISNGTMTQCPVDPLDNALCRNLS--MQLP----QLEQFT 503
+ A F + PQQ G + G ++P D L R +S + +P Q FT
Sbjct: 301 TNPAYLPF-NSPQQIFQYDG-LDTG------INPSDVGLRRTISAPVSMPETYLQSSCFT 352
Query: 504 ETIPQFQNFGEDDLQSIVQMGFGQNPNSETSLQSQSFHGSNQAPHMKAEL 553
+ +P + E D Q++ F + TS SQ G +A ++K E+
Sbjct: 353 QMLP--SSTWEGDFQNLCN--FDVDQARATSFPSQLLSGLVEAGNLKMEM 398
>gi|168056080|ref|XP_001780050.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668548|gb|EDQ55153.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 160
Score = 175 bits (443), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 98/169 (57%), Positives = 117/169 (69%), Gaps = 20/169 (11%)
Query: 282 TAASPSVNNTTKVAEANASESSKNKRCKPNEGKANGNGAVKAE-----DEGDDKQAKANN 336
T++ S +K EAN S K +R +G VKAE + GD ++
Sbjct: 3 TSSVVSDGKNSKSLEANEQTSLKRQR----------SGLVKAERSASENSGDSASPRSLK 52
Query: 337 A--KPPE--PPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKA 392
A KPP+ +DYIHVRARRGQATDSHSLAERVRREKISERMK LQDLVPGC+K+TGKA
Sbjct: 53 ATSKPPQDLSKQDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCSKITGKA 112
Query: 393 LMLDEIINYVQSLQRQVEFLSMKLASVNTRLELNVDALMSKDIYQPNKP 441
+MLDEIINYVQSLQRQ+EFLSMKLA+VN RL+ + D L+ KD+ Q P
Sbjct: 113 VMLDEIINYVQSLQRQIEFLSMKLAAVNPRLDYSYD-LLGKDMLQSRSP 160
>gi|357167346|ref|XP_003581118.1| PREDICTED: transcription factor bHLH62-like [Brachypodium
distachyon]
Length = 407
Score = 174 bits (442), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 104/213 (48%), Positives = 132/213 (61%), Gaps = 42/213 (19%)
Query: 313 GKANGNGAVKAEDEGDDKQAKANNAKPPEPPKDYIHVRARRGQATDSHSLAERVRREKIS 372
G ++ N AV A+ E ++++ PEP KDYIHVRARRGQATDSHSLAERVRR++IS
Sbjct: 219 GSSDENAAVPAKVELEEEK--------PEPVKDYIHVRARRGQATDSHSLAERVRRKRIS 270
Query: 373 ERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMKLASVNTRLELNVDALMS 432
ERMKLLQ LVPGCNK+TGKALMLDEIINYVQSLQRQVEFLSMKL+++N +L+L+ S
Sbjct: 271 ERMKLLQSLVPGCNKITGKALMLDEIINYVQSLQRQVEFLSMKLSTMNPQLDLDGQYKPS 330
Query: 433 KDIYQPNKPLPHSIFQIDSSASAF-FSHQPQQNPALHGNISNGTMTQCPVDPLDNALCRN 491
KD+ Q P + D A AF ++ P + A+ +++
Sbjct: 331 KDMNQVTMP----AYASDEPAGAFSYASSPADSFAMGSAVAH----------------HG 370
Query: 492 LSMQLPQLEQFTETIPQFQNFGEDDLQSIVQMG 524
L +Q F+ E DLQS+VQMG
Sbjct: 371 LELQ----GTFSW---------EHDLQSMVQMG 390
Score = 43.9 bits (102), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 39/80 (48%), Gaps = 26/80 (32%)
Query: 62 QFDSALSSIVSSPAASNSNISNESSV-IRELIGKLGNIGNNSGAGEITPHSLAPYINNNS 120
FDSALSS+VSSPA++ E V I +LIG+LG I N +
Sbjct: 66 HFDSALSSLVSSPASAFFAHGGEDDVAIGDLIGRLGGICNGA------------------ 107
Query: 121 NNNNGSSSTNASCYTTPLNS 140
S N SCY+TPL+S
Sbjct: 108 -------SANNSCYSTPLSS 120
>gi|326523695|dbj|BAJ93018.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 417
Score = 174 bits (442), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 93/161 (57%), Positives = 112/161 (69%), Gaps = 8/161 (4%)
Query: 322 KAEDEGDDKQAKANNAKPPEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDL 381
+ D G+D+ A A + EP KDYIHVRARRGQATDSHSLAERVRREKI ERMKLLQ L
Sbjct: 231 RVSDGGNDENAGAVEEEKSEPVKDYIHVRARRGQATDSHSLAERVRREKIGERMKLLQSL 290
Query: 382 VPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMKLASVNTRLELNVDALMSKDIYQPNKP 441
VP CNK+TGKALMLDEIINYVQSLQRQVEFLSMKL+++N +LEL+ + SK++ Q P
Sbjct: 291 VPSCNKITGKALMLDEIINYVQSLQRQVEFLSMKLSTMNPQLELDEQCIPSKEMNQMAVP 350
Query: 442 LPHSI-----FQIDSSASAFFSHQPQQNPALHGNISNGTMT 477
+ S F S + + P Q+ HG + GT +
Sbjct: 351 VYPSDDRNPGFSYAGSPADSLTVAPSQH---HGAVLEGTFS 388
Score = 47.4 bits (111), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 47/93 (50%), Gaps = 30/93 (32%)
Query: 56 STDHSLQFDSALSSIVSSPAASNSNIS-----NESSVIRELIGKLGNIGNNSGAGEITPH 110
S+ + FDSALSS+VSSPA++++ + I +LIG+LG+I N +
Sbjct: 54 SSATTAHFDSALSSLVSSPASASAGGGLARGGEDDVAIGDLIGRLGSICNGA-------- 105
Query: 111 SLAPYINNNSNNNNGSSSTNASCYTTPLNSPPK 143
S N SCY+TPL+SPP+
Sbjct: 106 -----------------SANNSCYSTPLSSPPR 121
>gi|356516734|ref|XP_003527048.1| PREDICTED: transcription factor bHLH79-like [Glycine max]
Length = 269
Score = 174 bits (442), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 106/196 (54%), Positives = 129/196 (65%), Gaps = 13/196 (6%)
Query: 288 VNNTTKVAEANAS--ESSKNKRCKPNEGKANGNGAVKAEDE----GDDKQAKANNAKPPE 341
V ++T A AN S +S NK+ K G + N KAE E G +K ++ +N KP E
Sbjct: 73 VLSSTTTATANLSNNDSGSNKQMKLG-GSSVENDGFKAEAEASSAGGNKSSEQSN-KPCE 130
Query: 342 PPK-DYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIIN 400
PK DYIHVRARRGQATDSHSLAER RREKISERMK+LQDLVPGCNKV GKAL+LDEIIN
Sbjct: 131 APKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIIN 190
Query: 401 YVQSLQRQVEFLSMKLASVNTRLELN--VDALMSKDIYQPNKPLPHSIFQIDSSASAFFS 458
Y+QSLQRQVEFLSMKL +VN+R+ +N +D SKD+ +P + S A+ ++
Sbjct: 191 YIQSLQRQVEFLSMKLEAVNSRMNMNPTIDGFPSKDV--GTQPFDIAGMVFGSQAARGYA 248
Query: 459 HQPQQNPALHGNISNG 474
LH I G
Sbjct: 249 QGSSPPGWLHMQIGGG 264
>gi|255537964|ref|XP_002510047.1| DNA binding protein, putative [Ricinus communis]
gi|223550748|gb|EEF52234.1| DNA binding protein, putative [Ricinus communis]
Length = 408
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 139/385 (36%), Positives = 186/385 (48%), Gaps = 90/385 (23%)
Query: 158 SSVAEFSADPGFAERAARFSRFGSRSFNGRSTGQFVPNHNPDQFGLSRSNNNPNPMTANE 217
S + + +D + E +F +GS SF+ + FGL+
Sbjct: 78 SHLVHYQSDSSYVELVPKFPSYGSGSFSEMVS----------SFGLTDCG---------- 117
Query: 218 KLPRVSSSPSLKVLGSQAQATGNKSPQDRSELANS---QEESSVSEQ----VPNDFNSRK 270
++S+S G T N + + + NS QE+ +SE+ V D RK
Sbjct: 118 ---QISNS------GCHPNYTSNSAANNERTITNSALSQEDHQLSEEPVVGVSPDGKRRK 168
Query: 271 RKAVSKG------KGKETAASPSVNNTTKVAEANASESSKNKRCKPNEGKANGNGAVKAE 324
R A +E PS N++ E + K R + N AN G A
Sbjct: 169 RLAEPSSPFDPNKNAEEMHKDPSGNSSDIPKE----QDEKKSRTEQNTA-ANLRGKQAA- 222
Query: 325 DEGDDKQAKANNAKPPEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPG 384
KQAK N+ P ++YIHVRARRGQAT+SHSLAERVRREKISERM+LLQ+LVPG
Sbjct: 223 -----KQAKENSHSGEAPKENYIHVRARRGQATNSHSLAERVRREKISERMRLLQELVPG 277
Query: 385 CNKVTGKALMLDEIINYVQSLQRQVEFLSMKLASVNTRLELNVDALMSKDIYQPNKPLPH 444
CNK+TGKA+MLDEIINYVQSLQ+QVEFLSMKLA+VN L ++++ ++SKDI
Sbjct: 278 CNKITGKAVMLDEIINYVQSLQQQVEFLSMKLATVNPELNIDIERILSKDIL-------- 329
Query: 445 SIFQIDSSASAFFSHQPQQNPALHGNISNGTMTQCPVDPLDNALCRNLSMQLPQLEQFTE 504
H N A+ G + P NA + + P +
Sbjct: 330 --------------HSRGGNAAIMG-----------LSPGINAHPYSHGIFPPNIPVIPN 364
Query: 505 TIPQF----QNFGEDDLQSIVQMGF 525
T PQF E+DLQ++ QMGF
Sbjct: 365 TNPQFPPMPHTVLENDLQNLFQMGF 389
>gi|255646074|gb|ACU23524.1| unknown [Glycine max]
Length = 402
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 109/234 (46%), Positives = 139/234 (59%), Gaps = 19/234 (8%)
Query: 330 KQAKANNAKPPEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVT 389
K ++ N KP DYIHVRARRGQATDSHSLAERVRREKISERMK LQDL+PGCNKV
Sbjct: 178 KGSEVQNQKP-----DYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLIPGCNKVA 232
Query: 390 GKALMLDEIINYVQSLQRQVEFLSMKLASVNTRLELNVDALMSKDIYQ------PNKPLP 443
GKA MLDEIINYVQSLQRQVEFLSMKLA+VN L+ N+D L +K+++ PN +P
Sbjct: 233 GKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPGLDFNIDELFAKEVFPSCAQSFPNIGIP 292
Query: 444 HSIFQIDSSASAFFSHQPQQNPALHGNISNGTMTQCPVDPLDNALCRNLSMQLPQL---- 499
S I ++ S + QQ + G + N P L + ++ LP+
Sbjct: 293 -SDMSISNNPSYLQFNSAQQLVSCCGGLINSMGISPPNMGLRTNIISTSTVPLPETFLDS 351
Query: 500 EQFTETIPQFQNFGEDDLQSIVQMGFGQNPNSETSLQSQSFHGSNQAPHMKAEL 553
F + +P N+ D QS+ + F Q + S Q F G +A ++K E+
Sbjct: 352 SCFAQILPS-SNWEGGDFQSLYNVAFDQGRTA--SFPPQPFTGLVEASNLKMEM 402
>gi|449461645|ref|XP_004148552.1| PREDICTED: transcription factor bHLH63-like [Cucumis sativus]
Length = 523
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 111/218 (50%), Positives = 136/218 (62%), Gaps = 16/218 (7%)
Query: 336 NAKPPEPPK-DYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALM 394
N+K E K DYIHVRARRGQATDSHSLAER RREKISERMK LQDLVPGCNK+TGKA M
Sbjct: 235 NSKASEVQKPDYIHVRARRGQATDSHSLAERARREKISERMKYLQDLVPGCNKITGKAGM 294
Query: 395 LDEIINYVQSLQRQVEFLSMKLASVNTRLELNVDALMSKDIYQPNKPLPHSIFQIDSSAS 454
LDEIINYVQSLQRQVEFLSMKLA+VN RL+ NVD L +K+++ P+ + S
Sbjct: 295 LDEIINYVQSLQRQVEFLSMKLAAVNPRLDFNVDDLFNKEVFPPSCTAANF-----PSVG 349
Query: 455 AFFSHQPQQNPALHGNISNGTMTQCP-----VDPLDNALCRNLSMQLPQLEQFTET--IP 507
S + L N +N M C ++ AL R +S + E F ++ +
Sbjct: 350 GMSSEMTDPSSYLQFNPNNQQMDSCCGLEMGINTSHVALRRTISAPVSFPENFLDSSCLT 409
Query: 508 QFQ-NFGED-DLQSIVQMGFGQNPNSETSLQSQSFHGS 543
QFQ + G D DLQ++ +GF Q S + S + GS
Sbjct: 410 QFQPSSGWDVDLQNMYNVGFDQG-RSSNAFSSHPYTGS 446
>gi|223702402|gb|ACN21632.1| putative basic helix-loop-helix protein BHLH7 [Lotus japonicus]
Length = 340
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 117/259 (45%), Positives = 154/259 (59%), Gaps = 25/259 (9%)
Query: 257 SVSEQVPNDFNSRKRKAVSKGKGKETAASPSVNNTTKVAEANASESSKNKRCKPN--EGK 314
++ E N+F S K+++ K K S +N VAE + SK+KR K + +G+
Sbjct: 75 TLVEAKANEFFSIKKESYKKRK------SDKPHNPKIVAEND----SKDKRIKVDSEDGE 124
Query: 315 ANGNGAVKAEDEGDDKQAK-------ANNAKPPEPPK-DYIHVRARRGQATDSHSLAERV 366
+N G + +D ++K ++N+K E K DYIHVRARRGQATDSHSLAERV
Sbjct: 125 SNITGKISIKDNKTATKSKNRGTCANSSNSKENEDQKLDYIHVRARRGQATDSHSLAERV 184
Query: 367 RREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMKLASVNTRLELN 426
RREKISERMK LQDLVPGCNK+TGKA MLDEIINYVQSLQRQVEFLSMKLA+VN LE N
Sbjct: 185 RREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFLSMKLATVNPALEFN 244
Query: 427 VDALMSKDIYQPNKPLPHSIFQIDSSASAFFSHQPQQNPALHGNISNGTMTQCPVDPLDN 486
D L K ++ P+ + + A+ + P Q +G + G ++P D
Sbjct: 245 SDDLFDKVVF-PSCDSTFPAINLTNPATYLQFNSPPQQMVSYGGLDTGMN----MNPSDV 299
Query: 487 ALCRNLSMQLPQLEQFTET 505
L R +S + E F ++
Sbjct: 300 GLRRTISAPVSVPETFIDS 318
>gi|62701739|gb|AAX92812.1| expressed protein [Oryza sativa Japonica Group]
Length = 507
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 169/471 (35%), Positives = 208/471 (44%), Gaps = 130/471 (27%)
Query: 131 ASCYTTPLNSPPKLNLPMSLGNSMPLNSSVAEFSADPGFAERAARFSRFGSRSFNGRSTG 190
ASCY+TP+ SP K + P+ S +A +AD AERAAR S + G
Sbjct: 93 ASCYSTPVGSPCKP------APAPPVPSLLA--AADAMIAERAARMSCLAAAGHGG---- 140
Query: 191 QFVPNHNPDQFGLSRSNNNPNPMTANEKLPRVSSSPSLKVLGSQAQATGNKSPQDRSELA 250
KL R +SS SL L A A G +L
Sbjct: 141 --------------------------GKLSRAASSQSL--LAETAAAGGVH------QLP 166
Query: 251 NSQEESSVSEQVPNDFNSRKRKA-VSKGKGKETAAS-------------PSVNNTTKVAE 296
S SS D RKRKA +K +GK+ A + S T+
Sbjct: 167 ASDGSSS-------DAPCRKRKAPCAKARGKDAATTIAKVLRLLSAPPLQSRRRTSPETM 219
Query: 297 ANASES----SKNKRCKPNEGKANGNGAVK--AEDEGDDKQAKANNAKPP-EPPKDYIHV 349
N +S +K K+CK + A G+ K A D G K EPPKDYIHV
Sbjct: 220 VNFPQSPEPGTKAKKCKLS-ADAAGDEDTKPVAGDAGHGGNGKGKVLDAAGEPPKDYIHV 278
Query: 350 RARRGQATDSHSLAERV--------------------------------RREKISERMKL 377
RARRGQATDSHSLAERV RREKISERMKL
Sbjct: 279 RARRGQATDSHSLAERVKAAGIDAANHNFFFSSILAFADAIAAVFHLQVRREKISERMKL 338
Query: 378 LQDLVPGCNKV--------------TGKALMLDEIINYVQSLQRQVEFLSMKLASVNTRL 423
LQDLVPGCNKV TGKA+MLDEIINYVQSLQRQVEFLSMKL++VN +L
Sbjct: 339 LQDLVPGCNKVAKFSQKINLNFTLVTGKAVMLDEIINYVQSLQRQVEFLSMKLSTVNPQL 398
Query: 424 ELNVDALMSKDIYQPNKPLPHSIFQIDSSASAFFSHQPQQNPALHGNISNGTMTQCPVDP 483
+ +VD + KD + P+ + + +P + S GT Q V
Sbjct: 399 DFDVDNFIPKDA---SDPIMPAPLSLPPPPPPLSYSPEGASPGICYASSQGTAMQSVVTS 455
Query: 484 ---LDNA--LCRNLSMQLPQLEQFTETIPQFQN-FGEDDLQSIVQMGFGQN 528
L+ A + + +P L+ F Q + EDDLQS+VQMGF N
Sbjct: 456 TKHLETAPTFANHHVIPVPSLDGFHSAHSQAGSCMWEDDLQSVVQMGFRGN 506
>gi|225428454|ref|XP_002284113.1| PREDICTED: transcription factor bHLH63-like [Vitis vinifera]
Length = 456
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 107/230 (46%), Positives = 142/230 (61%), Gaps = 15/230 (6%)
Query: 330 KQAKANNAKPPEPPK-DYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKV 388
++ A+ +K E K DYIHVRARRGQATDSHSLAERVRREKISERMK LQDLVPGCNK+
Sbjct: 236 RETSADTSKVSEVQKPDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKI 295
Query: 389 TGKALMLDEIINYVQSLQRQVEFLSMKLASVNTRLELNVDALMSKDIYQPNKP-LPHSIF 447
TGKA MLDEIINYVQSLQRQVEFLSMKLA+VN RL+ N+D ++K+++ P
Sbjct: 296 TGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRLDFNIDNFLAKEVFPACAANFPTIGM 355
Query: 448 QIDSSASAFFSHQPQQNPALHGNISNGTMTQCPVDPLDNALCRNLSMQLPQLEQFTET-I 506
+ + ++ + P Q A G + ++P + AL R +S + + F ++
Sbjct: 356 SSEMTNPSYLHYDPIQQVATCG-------VEMGINPAEIALRRTISAPVSIPDTFLDSCF 408
Query: 507 PQFQ--NFGEDDLQSIVQMGFGQNPNSETSLQSQ-SFHGSNQAPHMKAEL 553
Q Q + + DLQ++ F Q S SQ +F G A ++K E+
Sbjct: 409 TQIQPSSTWDADLQNLYGPEFHQ--GRLMSFPSQAAFTGPIDASNLKMEM 456
>gi|295913599|gb|ADG58045.1| transcription factor [Lycoris longituba]
Length = 229
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 86/125 (68%), Positives = 100/125 (80%), Gaps = 9/125 (7%)
Query: 344 KDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQ 403
+DYIHVRARRGQAT+SHSLAERVRREKISERMK LQDLVPGC+KVTGKA+MLDEIINYVQ
Sbjct: 71 EDYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQ 130
Query: 404 SLQRQVEFLSMKLASVNTRLELNVDALMSKDIYQPNKPLPHSIFQIDSSASAFFSHQPQQ 463
SLQRQVEFLSMKLA+VN L+ N++ L+SKD+ Q + SS++ FS Q
Sbjct: 131 SLQRQVEFLSMKLAAVNPTLDFNIEGLLSKDLLQ---------LRGGSSSAIGFSPQRIL 181
Query: 464 NPALH 468
+P LH
Sbjct: 182 HPQLH 186
>gi|297744394|emb|CBI37656.3| unnamed protein product [Vitis vinifera]
Length = 345
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 107/230 (46%), Positives = 142/230 (61%), Gaps = 15/230 (6%)
Query: 330 KQAKANNAKPPEPPK-DYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKV 388
++ A+ +K E K DYIHVRARRGQATDSHSLAERVRREKISERMK LQDLVPGCNK+
Sbjct: 125 RETSADTSKVSEVQKPDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKI 184
Query: 389 TGKALMLDEIINYVQSLQRQVEFLSMKLASVNTRLELNVDALMSKDIYQPNKP-LPHSIF 447
TGKA MLDEIINYVQSLQRQVEFLSMKLA+VN RL+ N+D ++K+++ P
Sbjct: 185 TGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRLDFNIDNFLAKEVFPACAANFPTIGM 244
Query: 448 QIDSSASAFFSHQPQQNPALHGNISNGTMTQCPVDPLDNALCRNLSMQLPQLEQFTET-I 506
+ + ++ + P Q A G + ++P + AL R +S + + F ++
Sbjct: 245 SSEMTNPSYLHYDPIQQVATCG-------VEMGINPAEIALRRTISAPVSIPDTFLDSCF 297
Query: 507 PQFQ--NFGEDDLQSIVQMGFGQNPNSETSLQSQ-SFHGSNQAPHMKAEL 553
Q Q + + DLQ++ F Q S SQ +F G A ++K E+
Sbjct: 298 TQIQPSSTWDADLQNLYGPEFHQ--GRLMSFPSQAAFTGPIDASNLKMEM 345
>gi|297602519|ref|NP_001052532.2| Os04g0350700 [Oryza sativa Japonica Group]
gi|57834129|emb|CAE05521.2| OSJNBa0038P21.14 [Oryza sativa Japonica Group]
gi|215766234|dbj|BAG98462.1| unnamed protein product [Oryza sativa Japonica Group]
gi|255675358|dbj|BAF14446.2| Os04g0350700 [Oryza sativa Japonica Group]
Length = 263
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 85/121 (70%), Positives = 98/121 (80%), Gaps = 5/121 (4%)
Query: 340 PEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEII 399
PEP KDYIHVRARRGQATDSHSLAERVRRE+ISERMKLLQ LVPGCNK+TGKALMLDEII
Sbjct: 72 PEPAKDYIHVRARRGQATDSHSLAERVRRERISERMKLLQSLVPGCNKITGKALMLDEII 131
Query: 400 NYVQSLQRQVEFLSMKLASVNTRLELNVDALMSKDI-YQPNKPLPHSIFQIDSSASAFFS 458
NYVQSLQRQVEFLSMKLA++N +L+ + + SKD+ + P P S D + + FS
Sbjct: 132 NYVQSLQRQVEFLSMKLATMNPQLDFDSHYMPSKDMSHMPVPAYPSS----DPTTTTAFS 187
Query: 459 H 459
+
Sbjct: 188 Y 188
>gi|219363691|ref|NP_001136513.1| uncharacterized protein LOC100216628 [Zea mays]
gi|194695994|gb|ACF82081.1| unknown [Zea mays]
Length = 314
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 109/203 (53%), Positives = 127/203 (62%), Gaps = 24/203 (11%)
Query: 250 ANSQEESSVSEQV---PNDF-NSRKRKAVSKGK--GKETAASPSVNNTTKVAEANASESS 303
S E SSVS+ D+ N+RKRKA G GKE S KVAEA +
Sbjct: 50 GGSPEGSSVSDPAWARARDYGNARKRKAPPTGSAGGKEACLS-------KVAEAKGPDGK 102
Query: 304 K------NKRCKPNEGKANGNGAVK----AEDEGDDKQAKANNAKPPEPPKDYIHVRARR 353
+ + R KP E + A E + K ++ EPPKDY+HVRARR
Sbjct: 103 RCRVGASDSRVKPKEEEEAAAAAAASDALVEVKAQKKGKGKSSKPAVEPPKDYVHVRARR 162
Query: 354 GQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLS 413
GQATDSHSLAERVRREKIS+RMK LQDLVPGCNKV GKALMLDEIINYVQSLQ+QVEFLS
Sbjct: 163 GQATDSHSLAERVRREKISQRMKFLQDLVPGCNKVVGKALMLDEIINYVQSLQQQVEFLS 222
Query: 414 MKLASVNTRLEL-NVDALMSKDI 435
MKLA+VN L+ N+ L+ KD+
Sbjct: 223 MKLATVNPELDFSNLSTLLHKDV 245
>gi|414589881|tpg|DAA40452.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 312
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 110/204 (53%), Positives = 127/204 (62%), Gaps = 28/204 (13%)
Query: 250 ANSQEESSVSEQV---PNDF-NSRKRKAVSKGK--GKETAASPSVNNTTKVAEANASESS 303
S E SSVS+ D+ N+RKRKA G GKE S KVAEA +
Sbjct: 50 GGSPEGSSVSDPAWARARDYGNARKRKAPPTGSAGGKEACLS-------KVAEAKGPD-- 100
Query: 304 KNKRCK-------PNEGKANGNGAVK----AEDEGDDKQAKANNAKPPEPPKDYIHVRAR 352
KRC+ P + K A E + K ++ EPPKDY+HVRAR
Sbjct: 101 -GKRCRVVGASDSPVKPKEEEEEAAASDALVEVKAQKKGKGKSSKPAVEPPKDYVHVRAR 159
Query: 353 RGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFL 412
RGQATDSHSLAERVRREKIS+RMK LQDLVPGCNKV GKALMLDEIINYVQSLQ+QVEFL
Sbjct: 160 RGQATDSHSLAERVRREKISQRMKFLQDLVPGCNKVVGKALMLDEIINYVQSLQQQVEFL 219
Query: 413 SMKLASVNTRLEL-NVDALMSKDI 435
SMKLA+VN L+ N+ L+ KD+
Sbjct: 220 SMKLATVNPELDFSNLSTLLHKDV 243
>gi|125557558|gb|EAZ03094.1| hypothetical protein OsI_25238 [Oryza sativa Indica Group]
gi|125599428|gb|EAZ39004.1| hypothetical protein OsJ_23423 [Oryza sativa Japonica Group]
Length = 256
Score = 172 bits (435), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 89/140 (63%), Positives = 107/140 (76%), Gaps = 5/140 (3%)
Query: 300 SESSKNKRCKPNEGKANGNGAVKAE---DEGDDKQAKANNAKPPEPPK-DYIHVRARRGQ 355
S++ + KR KP + ++ N +++ E D G+ +A NA PPEPPK DYIHVRARRGQ
Sbjct: 76 SDAPEAKRLKPMKS-SDKNDSLRTEAGTDSGNSSKAADKNATPPEPPKQDYIHVRARRGQ 134
Query: 356 ATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMK 415
ATDSHSLAER RREKISERMK+LQDLVPGCNKV GKA +LDEIINY+QSLQ QVEFLSMK
Sbjct: 135 ATDSHSLAERARREKISERMKILQDLVPGCNKVIGKASVLDEIINYIQSLQHQVEFLSMK 194
Query: 416 LASVNTRLELNVDALMSKDI 435
L +VN+ + + A SKD
Sbjct: 195 LEAVNSHMINGIVAFPSKDF 214
>gi|326521466|dbj|BAK00309.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 440
Score = 172 bits (435), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 101/218 (46%), Positives = 132/218 (60%), Gaps = 19/218 (8%)
Query: 269 RKRKAVSKGKGKETAASPSVNNTTKVAEANASESSKNKRCKPNEGKANGNGAVKAEDEGD 328
+KRK S+ +G + S T A+ + K++ +P NG + ED+ D
Sbjct: 198 KKRKRPSQDRGVKNVQEGSQQLATLAAKQEKDDGDKDEPKRPIVTSRKSNGK-QTEDKSD 256
Query: 329 DKQAKANNAKPPEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKV 388
P +DYIH+RAR GQAT+SHSLAERVRREKISERMK LQDLVPGC+KV
Sbjct: 257 ------------APKEDYIHIRARSGQATNSHSLAERVRREKISERMKFLQDLVPGCSKV 304
Query: 389 TGKALMLDEIINYVQSLQRQVEFLSMKLASVNTRLELNVDALMSKDIYQPNKPLPHSIFQ 448
GKA+MLDEIINYVQSLQRQVEFLSMKL++VN L+ N++ ++SKD++Q ++ S F
Sbjct: 305 IGKAVMLDEIINYVQSLQRQVEFLSMKLSAVNPALDFNIERILSKDLFQ-SQGTASSTFG 363
Query: 449 IDSSASAFFSHQPQQNPALHGNISN-----GTMTQCPV 481
F H P+ + A +I N G +T PV
Sbjct: 364 FLPDIGHQFLHPPKHSQAALHSIVNPADAFGRVTNAPV 401
>gi|222628662|gb|EEE60794.1| hypothetical protein OsJ_14380 [Oryza sativa Japonica Group]
Length = 293
Score = 172 bits (435), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 79/96 (82%), Positives = 88/96 (91%)
Query: 340 PEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEII 399
PEP KDYIHVRARRGQATDSHSLAERVRRE+ISERMKLLQ LVPGCNK+TGKALMLDEII
Sbjct: 102 PEPAKDYIHVRARRGQATDSHSLAERVRRERISERMKLLQSLVPGCNKITGKALMLDEII 161
Query: 400 NYVQSLQRQVEFLSMKLASVNTRLELNVDALMSKDI 435
NYVQSLQRQVEFLSMKLA++N +L+ + + SKD+
Sbjct: 162 NYVQSLQRQVEFLSMKLATMNPQLDFDSHYMPSKDM 197
>gi|356500821|ref|XP_003519229.1| PREDICTED: transcription factor BPE-like [Glycine max]
Length = 260
Score = 171 bits (434), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 91/161 (56%), Positives = 106/161 (65%), Gaps = 12/161 (7%)
Query: 279 GKETAASPSVNNTTKVAEANASESSKNKRCKPNEGKANGNGAVKAEDEGDDKQAKANNAK 338
G+E ++ + T V E + + K + EG + AE G K
Sbjct: 71 GEEEESAKGASTTNAVDEGGGGDGKRIKASESGEGGRENSSGKPAEQSG----------K 120
Query: 339 PP-EPPK-DYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLD 396
PP EPPK DYIHVRARRGQATDSHSLAER RREKISERMK LQDLVPGCNKV GKAL+LD
Sbjct: 121 PPSEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKTLQDLVPGCNKVIGKALVLD 180
Query: 397 EIINYVQSLQRQVEFLSMKLASVNTRLELNVDALMSKDIYQ 437
EIINY+QSLQRQ EFLSMKL +VN+R+E ++ KD Q
Sbjct: 181 EIINYIQSLQRQAEFLSMKLEAVNSRMESGIEVFPPKDFDQ 221
>gi|125664136|gb|ABN51065.1| basic helix-loop-helix protein [Sesamum indicum]
Length = 400
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 102/207 (49%), Positives = 128/207 (61%), Gaps = 43/207 (20%)
Query: 330 KQAKANNAKPPEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVT 389
K+AK N++ ++YIHVRA+RGQAT+SHSLAERVRRE+ISERM+LLQ+LVPGCNK+T
Sbjct: 215 KEAKDNSSGAEASKENYIHVRAKRGQATNSHSLAERVRRERISERMRLLQELVPGCNKIT 274
Query: 390 GKALMLDEIINYVQSLQRQVEFLSMKLASVNTRLELNVDALMSKDIYQPNKPLPHSIFQI 449
GKA+MLDEIINYVQSLQ+QVEFLSMKLA+VN L ++++ L+SKDI
Sbjct: 275 GKAVMLDEIINYVQSLQQQVEFLSMKLATVNPELNVDIERLLSKDI-------------- 320
Query: 450 DSSASAFFSHQPQQNPALHGNISNGTMTQCPVDPLDNALCRNLSMQ-LPQ--LEQFTETI 506
LH SN T + P L + Q LPQ L F T
Sbjct: 321 -----------------LHSRGSNATA--LGIGP---GLSSSHPFQGLPQGTLNAFPGTA 358
Query: 507 PQF----QNFGEDDLQSIVQMGFGQNP 529
PQF QN ++LQ+I+Q G+ NP
Sbjct: 359 PQFQSLPQNLWNNELQNILQNGYDSNP 385
>gi|116787019|gb|ABK24344.1| unknown [Picea sitchensis]
Length = 467
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 112/279 (40%), Positives = 145/279 (51%), Gaps = 57/279 (20%)
Query: 158 SSVAEFSADPGFAERAARFSRFGSRSFNGRSTGQFVPNHNPDQFGLSRSNNNPNPMTANE 217
S++ +F +DPGF E+AA+FS P +N D+ N++ N +
Sbjct: 160 SALVQFPSDPGFVEQAAKFS----------------PFNNIDR------NSSENVVCGAS 197
Query: 218 KLPRVSSSPSLKVLGSQAQATGNKSPQDRSELANSQEESSVSEQVPNDFNSRKRKAVSKG 277
LP P E SV S K V G
Sbjct: 198 NLP----------------------PIVGGVQQGGGENMSVF--------SEPTKCVDDG 227
Query: 278 KGKETAASPSVNNTTKVAEANASESSKNKRCKPNEGKANGNGAVKAE-DEGDDKQAKANN 336
GK+ A + T + E +K KRC+ E + E + + K+ K N
Sbjct: 228 NGKKRRA----KSLTSAENSKEPEEAKAKRCRLGESSEIDDDDNNDETSDSNSKKGKEKN 283
Query: 337 AKPPEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLD 396
+ + +YIHVRARRGQATDSHSLAERVRREKI++RMK LQDLVP CNKVTGKA+MLD
Sbjct: 284 SNVSQKDDNYIHVRARRGQATDSHSLAERVRREKINQRMKFLQDLVPTCNKVTGKAVMLD 343
Query: 397 EIINYVQSLQRQVEFLSMKLASVNTRLELNVDALMSKDI 435
EIINYVQSLQ QVEFLSMKLA+VN +L+ N+D +K++
Sbjct: 344 EIINYVQSLQHQVEFLSMKLATVNPKLDFNIDNFFAKEM 382
>gi|115455099|ref|NP_001051150.1| Os03g0728900 [Oryza sativa Japonica Group]
gi|28273388|gb|AAO38474.1| putative Helix-loop-helix DNA-binding domain containing protein
[Oryza sativa Japonica Group]
gi|50428703|gb|AAT77054.1| putative DNA binding protein [Oryza sativa Japonica Group]
gi|108710880|gb|ABF98675.1| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
gi|113549621|dbj|BAF13064.1| Os03g0728900 [Oryza sativa Japonica Group]
gi|125544737|gb|EAY90876.1| hypothetical protein OsI_12481 [Oryza sativa Indica Group]
gi|125587792|gb|EAZ28456.1| hypothetical protein OsJ_12437 [Oryza sativa Japonica Group]
Length = 327
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 90/184 (48%), Positives = 126/184 (68%), Gaps = 13/184 (7%)
Query: 331 QAKANNAKPPEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTG 390
Q+K +++ +DY+HVRA+RGQAT+SHSLAER+RR+KISERMKLLQDLVPGC+K+TG
Sbjct: 129 QSKEDSSDGDGTKEDYVHVRAKRGQATNSHSLAERLRRKKISERMKLLQDLVPGCSKITG 188
Query: 391 KALMLDEIINYVQSLQRQVEFLSMKLASVNTRLELNVDALMSKD-IYQPNKPLPHSIFQI 449
KA+MLDEIINYVQSLQRQVEFLSMKLA+VN L +++ ++SK + ++ L + + +
Sbjct: 189 KAVMLDEIINYVQSLQRQVEFLSMKLATVNPELSFDIEQILSKQMMLSQDRHL--AFYGV 246
Query: 450 DSSASAFFSH--QPQQNPALHGNISNGTMTQCPVDPLDNALCRNLSM--QLPQLEQFTET 505
D +SA +H Q P + N+SN P D L +++S Q+P + + +
Sbjct: 247 DPGSSALVAHFNQGIMQPEMLCNVSN------PADVLQGTTIQDISTVNQIPAMWEGLQN 300
Query: 506 IPQF 509
IP
Sbjct: 301 IPHL 304
>gi|414591363|tpg|DAA41934.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 448
Score = 170 bits (431), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 123/278 (44%), Positives = 153/278 (55%), Gaps = 52/278 (18%)
Query: 264 NDFNSRKRKAVSKGKGKE--TAASPSVNNTTKVAEANASESSKNKRCKPNEGKANGNGAV 321
+D RKRKA S GK K+ T A+P +A+ + + +E ++GNG
Sbjct: 204 SDGPCRKRKA-SGGKAKDVVTTATPKSREPETMAKRRKLSTDAAR----DEAGSHGNG-- 256
Query: 322 KAEDEGDDKQAKANNAKPPEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDL 381
K+ P+PPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDL
Sbjct: 257 ------KGKEVAPAAEPEPQPPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDL 310
Query: 382 VPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMKLASVNTRLELNVDA-LMSKD--IYQP 438
VPGC+KVTGKA+MLDEIINYVQSLQ QVEFLSMKL++V+ R EL+V ++ KD Q
Sbjct: 311 VPGCSKVTGKAVMLDEIINYVQSLQCQVEFLSMKLSTVDPRRELDVGCFVVPKDDVTMQA 370
Query: 439 NK-----------PLPHSIFQIDSSASAFFSHQPQQNPALHGNISNGTMTQCPVDPLDNA 487
N+ ++ + ++A F + P N HG ++ D
Sbjct: 371 NRLCAPATSSSSSAFCYAARSVVTNAKGFETPLPLAN---HGVAAD-----------DRP 416
Query: 488 LCRNLSMQLPQLEQFTETIPQFQNFGEDDLQSIVQMGF 525
L R PQ E EDDLQS+V MGF
Sbjct: 417 LERRTRDAGPQAGSLWE---------EDDLQSLVLMGF 445
>gi|8778763|gb|AAF79771.1|AC009317_30 T30E16.21 [Arabidopsis thaliana]
Length = 348
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 92/172 (53%), Positives = 116/172 (67%), Gaps = 14/172 (8%)
Query: 289 NNTTKVAEANASESSKNKRCKPNEGKANGNGAVKAEDEGDDKQAKANNAKPPEPPKDYIH 348
+ + K+ + +NKR K +E +G +AE G + + K EP KDYIH
Sbjct: 76 SKSAKIVSTIGASEGENKRQKIDE---VCDGKAEAESLGTETEQKKQQM---EPTKDYIH 129
Query: 349 VRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQ 408
VRARRGQATDSHSLAER RREKISERMK+LQDLVPGCNKV GKAL+LDEIINY+QSLQRQ
Sbjct: 130 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 189
Query: 409 VEFLSMKLASVNTRLELNVDALMSKDIYQPNKPLPHSIFQIDSSASAFFSHQ 460
VEFLSMKL +VN+R+ + +++ P + + I I+S S FF+ Q
Sbjct: 190 VEFLSMKLEAVNSRMNPGI------EVFPPKEVMILMI--INSIFSIFFTKQ 233
>gi|356498105|ref|XP_003517894.1| PREDICTED: transcription factor BPE-like [Glycine max]
Length = 264
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 88/136 (64%), Positives = 100/136 (73%), Gaps = 9/136 (6%)
Query: 311 NEGKANGNG-------AVKAEDEGDDKQAKANNAKPP-EPPK-DYIHVRARRGQATDSHS 361
NEG G+G + K E E + + KPP EPPK DYIHVRARRGQATDSHS
Sbjct: 90 NEGGGVGDGKRVKTSESGKGEGETSSGKLAEQSGKPPSEPPKQDYIHVRARRGQATDSHS 149
Query: 362 LAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMKLASVNT 421
LAER RREKISERMK+LQD+VPGCNKV GKAL+LDEIINY+QSLQRQVEFLSMKL +VN+
Sbjct: 150 LAERARREKISERMKILQDIVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNS 209
Query: 422 RLELNVDALMSKDIYQ 437
RL ++ KD Q
Sbjct: 210 RLAPRIEVFPPKDFDQ 225
>gi|226492880|ref|NP_001152266.1| BHLH transcription factor [Zea mays]
gi|195654447|gb|ACG46691.1| BHLH transcription factor [Zea mays]
Length = 428
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 123/278 (44%), Positives = 153/278 (55%), Gaps = 52/278 (18%)
Query: 264 NDFNSRKRKAVSKGKGKE--TAASPSVNNTTKVAEANASESSKNKRCKPNEGKANGNGAV 321
+D RKRKA S GK K+ T A+P +A+ + + +E ++GNG
Sbjct: 184 SDGPCRKRKA-SGGKAKDVVTTATPKSREPETMAKRRKLSTDAAR----DEAGSHGNG-- 236
Query: 322 KAEDEGDDKQAKANNAKPPEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDL 381
K+ P+PPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDL
Sbjct: 237 ------KGKEVAPAAEPEPQPPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDL 290
Query: 382 VPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMKLASVNTRLELNVDA-LMSKD--IYQP 438
VPGC+KVTGKA+MLDEIINYVQSLQ QVEFLSMKL++V+ R EL+V ++ KD Q
Sbjct: 291 VPGCSKVTGKAVMLDEIINYVQSLQCQVEFLSMKLSTVDPRRELDVGCFVVPKDDVTMQA 350
Query: 439 NK-----------PLPHSIFQIDSSASAFFSHQPQQNPALHGNISNGTMTQCPVDPLDNA 487
N+ ++ + ++A F + P N HG ++ D
Sbjct: 351 NRLCAPATSSSSSAFCYAARSVVTNAKGFETPLPLAN---HGVAAD-----------DRP 396
Query: 488 LCRNLSMQLPQLEQFTETIPQFQNFGEDDLQSIVQMGF 525
L R PQ E EDDLQS+V MGF
Sbjct: 397 LERRTRDAGPQAGSLWE---------EDDLQSLVLMGF 425
>gi|30696324|ref|NP_849829.1| transcription factor BPE [Arabidopsis thaliana]
gi|122222656|sp|Q0JXE7.1|BPE_ARATH RecName: Full=Transcription factor BPE; AltName: Full=Basic
helix-loop-helix protein 31; Short=AtbHLH31; Short=bHLH
31; AltName: Full=Protein BIG PETAL; AltName:
Full=Transcription factor EN 88; AltName: Full=bHLH
transcription factor bHLH031
gi|113431920|emb|CAK32499.1| basic helix loop helix protein [Arabidopsis thaliana]
gi|332195477|gb|AEE33598.1| transcription factor BPE [Arabidopsis thaliana]
Length = 343
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 92/172 (53%), Positives = 116/172 (67%), Gaps = 14/172 (8%)
Query: 289 NNTTKVAEANASESSKNKRCKPNEGKANGNGAVKAEDEGDDKQAKANNAKPPEPPKDYIH 348
+ + K+ + +NKR K +E +G +AE G + + K EP KDYIH
Sbjct: 82 SKSAKIVSTIGASEGENKRQKIDE---VCDGKAEAESLGTETEQKKQQM---EPTKDYIH 135
Query: 349 VRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQ 408
VRARRGQATDSHSLAER RREKISERMK+LQDLVPGCNKV GKAL+LDEIINY+QSLQRQ
Sbjct: 136 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 195
Query: 409 VEFLSMKLASVNTRLELNVDALMSKDIYQPNKPLPHSIFQIDSSASAFFSHQ 460
VEFLSMKL +VN+R+ + +++ P + + I I+S S FF+ Q
Sbjct: 196 VEFLSMKLEAVNSRMNPGI------EVFPPKEVMILMI--INSIFSIFFTKQ 239
>gi|168046350|ref|XP_001775637.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673055|gb|EDQ59584.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 162
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 84/106 (79%), Positives = 94/106 (88%), Gaps = 4/106 (3%)
Query: 333 KANNAKPPE--PPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTG 390
K +KPP+ P +DYIHVRARRGQATDSHSLAERVRREKISERMK LQDLVPGC+KVTG
Sbjct: 58 KGATSKPPQDLPKQDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCSKVTG 117
Query: 391 KALMLDEIINYVQSLQRQVEFLSMKLASVN-TRLELNVDALMSKDI 435
KA+MLDEIINYVQSLQRQ+EFLSMKLA+VN RL+ N D L+SKD+
Sbjct: 118 KAVMLDEIINYVQSLQRQIEFLSMKLAAVNPPRLDHNYD-LLSKDM 162
>gi|6520231|dbj|BAA87957.1| helix-loop-helix protein homolog [Arabidopsis thaliana]
Length = 318
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 92/172 (53%), Positives = 116/172 (67%), Gaps = 14/172 (8%)
Query: 289 NNTTKVAEANASESSKNKRCKPNEGKANGNGAVKAEDEGDDKQAKANNAKPPEPPKDYIH 348
+ + K+ + +NKR K +E +G +AE G + + K EP KDYIH
Sbjct: 82 SKSAKIVSTIGASEGENKRQKIDE---VCDGKAEAESLGTETEQKKQQM---EPTKDYIH 135
Query: 349 VRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQ 408
VRARRGQATDSHSLAER RREKISERMK+LQDLVPGCNKV GKAL+LDEIINY+QSLQRQ
Sbjct: 136 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 195
Query: 409 VEFLSMKLASVNTRLELNVDALMSKDIYQPNKPLPHSIFQIDSSASAFFSHQ 460
VEFLSMKL +VN+R+ + +++ P + + I I+S S FF+ Q
Sbjct: 196 VEFLSMKLEAVNSRMNPGI------EVFPPKEVMILMI--INSIFSIFFTKQ 239
>gi|226508342|ref|NP_001152551.1| DNA binding protein [Zea mays]
gi|195657419|gb|ACG48177.1| DNA binding protein [Zea mays]
Length = 454
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 81/112 (72%), Positives = 95/112 (84%), Gaps = 2/112 (1%)
Query: 331 QAKANNAKPPEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTG 390
+ K P +DYIH+RARRGQAT+SHSLAER+RREKISERMKLLQDLVPGC+KVTG
Sbjct: 239 RGKGEKEVPESQKEDYIHIRARRGQATNSHSLAERLRREKISERMKLLQDLVPGCSKVTG 298
Query: 391 KALMLDEIINYVQSLQRQVEFLSMKLASVNTRLELNVDALMSKDIYQ-PNKP 441
KA+MLDEIINYVQSLQRQVEFLSMKLA+VN RL+ N++ L+SKD+ + P P
Sbjct: 299 KAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLD-NIEGLLSKDLLRFPGAP 349
>gi|242033101|ref|XP_002463945.1| hypothetical protein SORBIDRAFT_01g009380 [Sorghum bicolor]
gi|241917799|gb|EER90943.1| hypothetical protein SORBIDRAFT_01g009380 [Sorghum bicolor]
Length = 315
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 93/186 (50%), Positives = 129/186 (69%), Gaps = 13/186 (6%)
Query: 331 QAKANNAKPPEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTG 390
Q+K +++ +DY+HVRA+RGQAT+SHSLAER+RR+KISERMKLLQDLVPGCNK+TG
Sbjct: 120 QSKEDSSDGDGTKEDYVHVRAKRGQATNSHSLAERLRRKKISERMKLLQDLVPGCNKITG 179
Query: 391 KALMLDEIINYVQSLQRQVEFLSMKLASVNTRLELNVDALMSKD-IYQPNKPLPHSIFQI 449
KA+MLDEIINYVQSLQRQVEFLSMKLA+VN L +++ ++SK + ++ L + + +
Sbjct: 180 KAVMLDEIINYVQSLQRQVEFLSMKLATVNPELGFDIEQIISKQMMLSQDRHL--AFYGV 237
Query: 450 DSSASAFFS--HQPQQNPALHGNISNGTMTQCPVDPLDNALCRNLSM-QLPQLEQFTETI 506
D +S+ + +Q P + NISN PVD L + +M Q+P + + + +
Sbjct: 238 DPGSSSLTAPFNQGIMQPEMMCNISN------PVDVLHGTIHDLSTMNQIPSMWEGVQNM 291
Query: 507 PQFQNF 512
PQ NF
Sbjct: 292 PQM-NF 296
>gi|224107851|ref|XP_002314625.1| predicted protein [Populus trichocarpa]
gi|222863665|gb|EEF00796.1| predicted protein [Populus trichocarpa]
Length = 200
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 80/104 (76%), Positives = 89/104 (85%), Gaps = 1/104 (0%)
Query: 335 NNAKPPEPPK-DYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKAL 393
+ +PPEP K DYIHVRARRGQATDSHSLAER RREKISERMK+LQDLVPGCNKV GKAL
Sbjct: 59 HKTQPPEPSKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKAL 118
Query: 394 MLDEIINYVQSLQRQVEFLSMKLASVNTRLELNVDALMSKDIYQ 437
+LDEIINY+QSLQRQVEFLSMKL +VNTR+ ++ SKD Q
Sbjct: 119 VLDEIINYIQSLQRQVEFLSMKLEAVNTRMNPGIEVFASKDFGQ 162
>gi|297837577|ref|XP_002886670.1| hypothetical protein ARALYDRAFT_893615 [Arabidopsis lyrata subsp.
lyrata]
gi|297332511|gb|EFH62929.1| hypothetical protein ARALYDRAFT_893615 [Arabidopsis lyrata subsp.
lyrata]
Length = 264
Score = 169 bits (428), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 87/147 (59%), Positives = 105/147 (71%), Gaps = 6/147 (4%)
Query: 291 TTKVAEANASESSKNKRCKPNEGKANGNGAVKAEDEGDDKQAKANNAKPPEPPKDYIHVR 350
+ K+ N + +NKR K +E +G +AE G + + K EP KDYIHVR
Sbjct: 84 SVKIVSINGASEGENKRQKIDE---VCDGKAEAESLGTETEQKKLQI---EPTKDYIHVR 137
Query: 351 ARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVE 410
ARRGQATDSHSLAER RREKISERMK+LQDLVPGCNKV GKAL+LDEIINY+QSLQRQVE
Sbjct: 138 ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVE 197
Query: 411 FLSMKLASVNTRLELNVDALMSKDIYQ 437
FLSMKL +VN+R+ ++ K+ Q
Sbjct: 198 FLSMKLEAVNSRMNPGIEVFPPKEFGQ 224
>gi|356500809|ref|XP_003519223.1| PREDICTED: transcription factor BPE-like [Glycine max]
Length = 255
Score = 169 bits (428), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 94/164 (57%), Positives = 108/164 (65%), Gaps = 11/164 (6%)
Query: 278 KGKETAASPSVNNTTKVAEANASESS--KNKRCKPNE-GKANGNGAVKAEDEGDDKQAKA 334
K + A V +T + NA + KR K +E GK G K AK
Sbjct: 60 KKRRQAEEEEVESTRGASTTNAVDEGCGDGKRVKTSESGKGEGESC-------SGKPAKQ 112
Query: 335 NNAKPPEPPK-DYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKAL 393
+ P EPPK DYIHVRARRGQATDSHSLAER RREKISERMK+LQDLVPGCNKV GKAL
Sbjct: 113 SGKPPSEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKAL 172
Query: 394 MLDEIINYVQSLQRQVEFLSMKLASVNTRLELNVDALMSKDIYQ 437
+LDEIINY+QSLQRQVEFLSMKL +VN+R+ ++ KD Q
Sbjct: 173 VLDEIINYIQSLQRQVEFLSMKLEAVNSRIAPGIEVFPPKDFDQ 216
>gi|125578091|gb|EAZ19313.1| hypothetical protein OsJ_34859 [Oryza sativa Japonica Group]
Length = 311
Score = 169 bits (427), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 92/156 (58%), Positives = 106/156 (67%), Gaps = 28/156 (17%)
Query: 299 ASESSKNKRCKPNEGKAN--GNGAVKAEDEGDDKQAKANNAKPPEPPKDYIHVRARRGQA 356
+++++ ++ KP G A GNG K D EPPKDYIHVRARRGQA
Sbjct: 105 SADAAGDEDTKPVAGDAGHGGNGKGKVLDAAG------------EPPKDYIHVRARRGQA 152
Query: 357 TDSHSLAERVRREKISERMKLLQDLVPGCNK--------------VTGKALMLDEIINYV 402
TDSHSLAERVRREKISERMKLLQDLVPGCNK VTGKA+MLDEIINYV
Sbjct: 153 TDSHSLAERVRREKISERMKLLQDLVPGCNKVAKFSQKINLNFTLVTGKAVMLDEIINYV 212
Query: 403 QSLQRQVEFLSMKLASVNTRLELNVDALMSKDIYQP 438
QSLQRQVEFLSMKL++VN +L+ +VD + KD P
Sbjct: 213 QSLQRQVEFLSMKLSTVNPQLDFDVDNFIPKDASDP 248
>gi|224067162|ref|XP_002302386.1| predicted protein [Populus trichocarpa]
gi|222844112|gb|EEE81659.1| predicted protein [Populus trichocarpa]
Length = 330
Score = 168 bits (425), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 89/159 (55%), Positives = 111/159 (69%), Gaps = 17/159 (10%)
Query: 330 KQAKANNAKPPEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVT 389
KQAK + P ++Y HVRARRGQAT+SHSLAERVRREKISERM++LQ+LVPGCNK+T
Sbjct: 144 KQAKDDTQSGEVPKENYFHVRARRGQATNSHSLAERVRREKISERMRMLQELVPGCNKIT 203
Query: 390 GKALMLDEIINYVQSLQRQVEFLSMKLASVNTRLELNVDALMSKDI------------YQ 437
GKA+MLDEIINYVQSLQ+QVEFLSMKLA+VN L+++V+ ++SKDI +
Sbjct: 204 GKAVMLDEIINYVQSLQQQVEFLSMKLATVNPELQIDVERILSKDILHSRGGNAAILGFS 263
Query: 438 P---NKPLPHSIFQIDSSASAFFSHQPQQNPALHGNISN 473
P + P H IFQ + PQ +PA H + N
Sbjct: 264 PGISSHPYSHRIFQ--PGIQVIPNSNPQFSPAPHAVLDN 300
>gi|21592490|gb|AAM64440.1| unknown [Arabidopsis thaliana]
Length = 264
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 86/149 (57%), Positives = 105/149 (70%), Gaps = 6/149 (4%)
Query: 289 NNTTKVAEANASESSKNKRCKPNEGKANGNGAVKAEDEGDDKQAKANNAKPPEPPKDYIH 348
+ + K+ + +NKR K +E +G +AE G + + K EP KDYIH
Sbjct: 82 SKSAKIVSTIGASEGENKRQKIDE---VCDGKAEAESLGTETEQKKQQM---EPTKDYIH 135
Query: 349 VRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQ 408
VRARRGQATDSHSLAER RREKISERMK+LQDLVPGCNKV GKAL+LDEIINY+QSLQRQ
Sbjct: 136 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 195
Query: 409 VEFLSMKLASVNTRLELNVDALMSKDIYQ 437
VEFLSMKL +VN+R+ ++ K+ Q
Sbjct: 196 VEFLSMKLEAVNSRMNPGIEVFPPKEFGQ 224
>gi|225456604|ref|XP_002267633.1| PREDICTED: transcription factor bHLH79 isoform 1 [Vitis vinifera]
Length = 284
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 90/141 (63%), Positives = 102/141 (72%), Gaps = 12/141 (8%)
Query: 302 SSKNKRCK----PNEGKANGNGAVKAEDEGDDKQAK--ANNAKPPEPPK-DYIHVRARRG 354
+S KR K P+E NG KAE E + A +KP E K DYIHVRARRG
Sbjct: 108 ASNGKRMKISRTPDE-----NGGSKAELEASSVAGEKPAEESKPAEQSKQDYIHVRARRG 162
Query: 355 QATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSM 414
QATDSHSLAER RREKISERMK+LQDLVPGCNKV GKAL+LDEIINY+QSLQRQVEFLSM
Sbjct: 163 QATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSM 222
Query: 415 KLASVNTRLELNVDALMSKDI 435
KL +VN+R+ V+ KD+
Sbjct: 223 KLEAVNSRMNHTVEGFPLKDL 243
>gi|356526880|ref|XP_003532044.1| PREDICTED: transcription factor BPE-like [Glycine max]
Length = 273
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 82/104 (78%), Positives = 90/104 (86%), Gaps = 2/104 (1%)
Query: 336 NAKPP-EPPK-DYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKAL 393
+AKP EPPK DYIHVRARRGQATDSHSLAER RREKISERMK+LQDLVPGCNKV GKAL
Sbjct: 131 SAKPASEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKAL 190
Query: 394 MLDEIINYVQSLQRQVEFLSMKLASVNTRLELNVDALMSKDIYQ 437
+LDEIINY+QSLQRQVEFLSMKL +VN+RL ++A KD Q
Sbjct: 191 VLDEIINYIQSLQRQVEFLSMKLEAVNSRLNSGIEAFPPKDFGQ 234
>gi|18406408|ref|NP_564749.1| transcription factor BPE [Arabidopsis thaliana]
gi|28393152|gb|AAO42009.1| putative bHLH protein [Arabidopsis thaliana]
gi|28827506|gb|AAO50597.1| putative bHLH protein [Arabidopsis thaliana]
gi|113431918|emb|CAK32498.1| basic helix loop helix protein [Arabidopsis thaliana]
gi|332195476|gb|AEE33597.1| transcription factor BPE [Arabidopsis thaliana]
Length = 264
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 86/149 (57%), Positives = 105/149 (70%), Gaps = 6/149 (4%)
Query: 289 NNTTKVAEANASESSKNKRCKPNEGKANGNGAVKAEDEGDDKQAKANNAKPPEPPKDYIH 348
+ + K+ + +NKR K +E +G +AE G + + K EP KDYIH
Sbjct: 82 SKSAKIVSTIGASEGENKRQKIDE---VCDGKAEAESLGTETEQKKQQM---EPTKDYIH 135
Query: 349 VRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQ 408
VRARRGQATDSHSLAER RREKISERMK+LQDLVPGCNKV GKAL+LDEIINY+QSLQRQ
Sbjct: 136 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 195
Query: 409 VEFLSMKLASVNTRLELNVDALMSKDIYQ 437
VEFLSMKL +VN+R+ ++ K+ Q
Sbjct: 196 VEFLSMKLEAVNSRMNPGIEVFPPKEFGQ 224
>gi|297734057|emb|CBI15304.3| unnamed protein product [Vitis vinifera]
Length = 269
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 90/141 (63%), Positives = 102/141 (72%), Gaps = 12/141 (8%)
Query: 302 SSKNKRCK----PNEGKANGNGAVKAEDEGDDKQAK--ANNAKPPEPPK-DYIHVRARRG 354
+S KR K P+E NG KAE E + A +KP E K DYIHVRARRG
Sbjct: 93 ASNGKRMKISRTPDE-----NGGSKAELEASSVAGEKPAEESKPAEQSKQDYIHVRARRG 147
Query: 355 QATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSM 414
QATDSHSLAER RREKISERMK+LQDLVPGCNKV GKAL+LDEIINY+QSLQRQVEFLSM
Sbjct: 148 QATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSM 207
Query: 415 KLASVNTRLELNVDALMSKDI 435
KL +VN+R+ V+ KD+
Sbjct: 208 KLEAVNSRMNHTVEGFPLKDL 228
>gi|224081861|ref|XP_002306505.1| predicted protein [Populus trichocarpa]
gi|222855954|gb|EEE93501.1| predicted protein [Populus trichocarpa]
Length = 407
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 91/159 (57%), Positives = 107/159 (67%), Gaps = 17/159 (10%)
Query: 330 KQAKANNAKPPEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVT 389
KQAK N P DYIHVRARRGQAT+SHSLAERVRREKISERM++LQ+LVPGCNK+T
Sbjct: 221 KQAKDNPQSGEAPKDDYIHVRARRGQATNSHSLAERVRREKISERMRMLQELVPGCNKIT 280
Query: 390 GKALMLDEIINYVQSLQRQVEFLSMKLASVNTRLELNVDALMSKDI------------YQ 437
GKA+MLDEIINYVQSLQ+QVEFLSMKLA+VN L +V+ + SKDI +
Sbjct: 281 GKAVMLDEIINYVQSLQQQVEFLSMKLATVNPELYNDVEKIQSKDILHSRGGNAAILGFS 340
Query: 438 P---NKPLPHSIFQIDSSASAFFSHQPQQNPALHGNISN 473
P + H IFQ + PQ +PA H + N
Sbjct: 341 PGINSHQYSHGIFQ--PGIPVILNSNPQFSPAHHAVLDN 377
>gi|224122148|ref|XP_002318764.1| predicted protein [Populus trichocarpa]
gi|222859437|gb|EEE96984.1| predicted protein [Populus trichocarpa]
Length = 359
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 100/204 (49%), Positives = 123/204 (60%), Gaps = 34/204 (16%)
Query: 233 SQAQATGNKSPQDRSELANSQEESSVSEQVPNDFNSRKRKAVSKGKGKETAASPSVNNTT 292
++ Q+TG+ + D+ E E E P D RKRK + N+
Sbjct: 87 TKKQSTGSSTVVDKLETG----EQVTQEVTPVD---RKRKTTNGSL-----------NSA 128
Query: 293 KVAEANASESSKNKRCKPNEGKANGNGAVKAEDEGDDKQAKANNAKPPEPPKDYIHVRAR 352
+ + +S + K+C+ G +K E+ K+ KA P EPP Y+HVRAR
Sbjct: 129 QSKDVKEVKSKRQKKCR---------GDMKQEE----KRPKAVKKVPEEPPTGYVHVRAR 175
Query: 353 RGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFL 412
RGQATDSHSLAERVRREKISERMK+LQ LVPGC+KVTGKALMLDEIINYVQSLQ QVEFL
Sbjct: 176 RGQATDSHSLAERVRREKISERMKMLQRLVPGCDKVTGKALMLDEIINYVQSLQNQVEFL 235
Query: 413 SMKLASVNTRLE---LNVDALMSK 433
SMKLASVN + +DA M +
Sbjct: 236 SMKLASVNPMFYDFGMELDAFMVR 259
>gi|212723614|ref|NP_001131789.1| uncharacterized protein LOC100193160 [Zea mays]
gi|194692538|gb|ACF80353.1| unknown [Zea mays]
gi|414872589|tpg|DAA51146.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 316
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 98/216 (45%), Positives = 142/216 (65%), Gaps = 22/216 (10%)
Query: 310 PNEGKANGNGAVKAE----DEGDDK-----QAKANNAKPPEPPKDYIHVRARRGQATDSH 360
PN G G+ + E +EG+ K Q+K +++ +DY+H+RA+RGQAT+SH
Sbjct: 90 PNAGDQQTEGSSQPERNSMEEGNRKISPKIQSKEDSSDGDGTKEDYVHIRAKRGQATNSH 149
Query: 361 SLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMKLASVN 420
SLAER+RR+KISERMKLLQDLVPGC+K+TGKA+MLDEIINYVQSLQRQVEFLSMKL++VN
Sbjct: 150 SLAERLRRKKISERMKLLQDLVPGCSKITGKAVMLDEIINYVQSLQRQVEFLSMKLSTVN 209
Query: 421 TRLELNVDALMSKD-IYQPNKPLPHSIFQIDSSASAFFS--HQPQQNPALHGNISNGTMT 477
L +++ ++SK + ++ L + + +D +S+ + +Q PA+ NISN
Sbjct: 210 PELGFDIEQIISKQMMLSQDRHL--AFYGVDPGSSSLTAPFNQGIVQPAMMCNISN---- 263
Query: 478 QCPVDPLDNALCRNLSM-QLPQLEQFTETIPQFQNF 512
P D L + +M Q+P + + +++PQ NF
Sbjct: 264 --PADVLHGTIHDVSTMNQIPSMWEGLQSMPQM-NF 296
>gi|326514032|dbj|BAJ92166.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 316
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 92/186 (49%), Positives = 126/186 (67%), Gaps = 13/186 (6%)
Query: 331 QAKANNAKPPEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTG 390
Q+K +++ ++Y+H+RA+RGQAT+SHSLAER+RR+KISERMKLLQDLVPGCNK+TG
Sbjct: 120 QSKEDSSDGDGTKENYVHLRAKRGQATNSHSLAERLRRKKISERMKLLQDLVPGCNKITG 179
Query: 391 KALMLDEIINYVQSLQRQVEFLSMKLASVNTRLELNVDALMSKD-IYQPNKPLPHSIFQI 449
KA+MLDEIINYVQSLQRQVEFLSMKLA+VN L +++ ++SK + ++ L +
Sbjct: 180 KAVMLDEIINYVQSLQRQVEFLSMKLATVNPELGFDIEQILSKQMMLSQDRHL--GFYGA 237
Query: 450 DSSASAFFSH--QPQQNPALHGNISNGTMTQCPVDPLDNALCRNLSM-QLPQLEQFTETI 506
D ASA +H Q +P + N SN PV L + +M Q+P++ + + I
Sbjct: 238 DPGASALIAHFNQGMMHPDMICNASN------PVGALHGTIHDISTMNQMPEMWETLQNI 291
Query: 507 PQFQNF 512
P NF
Sbjct: 292 PHM-NF 296
>gi|218195917|gb|EEC78344.1| hypothetical protein OsI_18091 [Oryza sativa Indica Group]
Length = 339
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 94/171 (54%), Positives = 112/171 (65%), Gaps = 7/171 (4%)
Query: 283 AASPSVNNTTKVAEANASESSKNKR----CKPNEGKANGNGAVKAEDEGDDKQAKANNAK 338
+ P +T+ +A+ +S K+KR K E K + D DD + KA A
Sbjct: 112 GSCPCSLGSTQDMDASWGKSRKHKRSNVGLKGLEEKKARRVVLHQHD--DDVKKKAKEAA 169
Query: 339 PPEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEI 398
EPP YIHVRARRGQATDSHSLAERVRREKISERMK+LQ LVPGC+KVTGKALMLDEI
Sbjct: 170 GGEPPAGYIHVRARRGQATDSHSLAERVRREKISERMKMLQSLVPGCDKVTGKALMLDEI 229
Query: 399 INYVQSLQRQVEFLSMKLASVNTRL-ELNVDALMSKDIYQPNKPLPHSIFQ 448
I+YVQSLQ QVEFLSMKLAS+N + E M D+ + +PH + Q
Sbjct: 230 ISYVQSLQNQVEFLSMKLASLNPLMYEFGPGIDMHPDVLRQLAKMPHEMVQ 280
>gi|357119169|ref|XP_003561318.1| PREDICTED: transcription factor bHLH79-like [Brachypodium
distachyon]
Length = 240
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 86/135 (63%), Positives = 101/135 (74%), Gaps = 3/135 (2%)
Query: 304 KNKRCKPNEGK-ANGNGAVKAE-DEGDDKQAKANNAKPPEPPK-DYIHVRARRGQATDSH 360
+ KR K E A+GN A+ D G+ + N PPEPPK DYIHVRARRGQATDSH
Sbjct: 64 EEKRLKKMESDSADGNLRTNAQTDSGNASKVVDRNPTPPEPPKQDYIHVRARRGQATDSH 123
Query: 361 SLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMKLASVN 420
S+AER RREKISERMK+LQDLVPGCNKV GKA +LDEIINY+Q+LQRQVEFLSMKL +VN
Sbjct: 124 SIAERARREKISERMKMLQDLVPGCNKVIGKASVLDEIINYIQALQRQVEFLSMKLEAVN 183
Query: 421 TRLELNVDALMSKDI 435
+ + + SKD+
Sbjct: 184 AHVNNRIASFQSKDV 198
>gi|297849334|ref|XP_002892548.1| hypothetical protein ARALYDRAFT_888270 [Arabidopsis lyrata subsp.
lyrata]
gi|297338390|gb|EFH68807.1| hypothetical protein ARALYDRAFT_888270 [Arabidopsis lyrata subsp.
lyrata]
Length = 364
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 95/198 (47%), Positives = 122/198 (61%), Gaps = 44/198 (22%)
Query: 342 PPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINY 401
P ++YIH+RARRGQAT+SHSLAERVRREKISERM+LLQ+LVPGCNK+TGKA+MLDEIINY
Sbjct: 197 PKENYIHMRARRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINY 256
Query: 402 VQSLQRQVEFLSMKLASVNTRLELNVDALMSKDIYQPNKPLPHSIFQIDSSASAFFSHQP 461
VQSLQ+QVEFLSMKLA+VN + +++D +++KD+ Q +
Sbjct: 257 VQSLQQQVEFLSMKLATVNPEINIDIDRILAKDLLQ---------------------SRD 295
Query: 462 QQNPALHGNISNGTMTQCPVDPLDNALCRNLSMQLPQLEQFTETIPQF----QNFGEDDL 517
+ P L N +G P NLS T T PQ+ Q E +L
Sbjct: 296 RNTPTLGLNPFSGFQGTIP----------NLS---------TTTNPQYNPLPQTTLESEL 336
Query: 518 QSIVQMGFGQNPNSETSL 535
Q++ QMGF NP + +S
Sbjct: 337 QNLYQMGFVSNPTTMSSF 354
>gi|79318615|ref|NP_001031093.1| transcription factor bHLH76 [Arabidopsis thaliana]
gi|45935021|gb|AAS79545.1| putative transcription factor [Arabidopsis thaliana]
gi|46367460|emb|CAG25856.1| hypothetical protein [Arabidopsis thaliana]
gi|332192548|gb|AEE30669.1| transcription factor bHLH76 [Arabidopsis thaliana]
Length = 339
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 92/178 (51%), Positives = 121/178 (67%), Gaps = 18/178 (10%)
Query: 287 SVNNTTKVAEANASESSKNKRCKPNEGKANGNGAVK-----AEDEGDDKQA--------- 332
S+NN ++ ++++ + +C K + K E+E D KQ
Sbjct: 93 SINNVSEDSQSSGGNGHDDAKCGQTSSKGFSSKKRKRIGKDCEEEEDKKQKDEQSPTSNA 152
Query: 333 -KANNAK-PPEPPKD-YIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVT 389
K N+ K P + KD YIH+RARRGQAT+SHSLAERVRREKISERMK LQDLVPGC+KVT
Sbjct: 153 NKTNSEKQPSDSLKDGYIHMRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCDKVT 212
Query: 390 GKALMLDEIINYVQSLQRQVEFLSMKLASVNTRLELNVDALMSKDIYQPNKP-LPHSI 446
GKA+MLDEIINYVQSLQ Q+EFLSMKL++VN L+ N+++L++KD Q + P PH++
Sbjct: 213 GKAVMLDEIINYVQSLQCQIEFLSMKLSAVNPVLDFNLESLLAKDALQSSAPTFPHNM 270
>gi|168039065|ref|XP_001772019.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162676620|gb|EDQ63100.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 147
Score = 165 bits (418), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 91/145 (62%), Positives = 102/145 (70%), Gaps = 16/145 (11%)
Query: 309 KPNEGKANGNGAVKA-------EDEGDDKQAKA----NNAKPPEPPKDYIHVRARRGQAT 357
KP K + +VKA E+ GD +A NN +DYIHVRARRGQAT
Sbjct: 3 KPKRCKGENDESVKAKAERSCSENSGDSGSPRALKDSNNRNKILSKQDYIHVRARRGQAT 62
Query: 358 DSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMKLA 417
DSHSLAERVRREKISERMK LQDLVPGCNKVTGKA+MLDEIINYVQSLQRQVE LSMKLA
Sbjct: 63 DSHSLAERVRREKISERMKYLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVESLSMKLA 122
Query: 418 SVN-----TRLELNVDALMSKDIYQ 437
SVN RL+ N + ++KD+ Q
Sbjct: 123 SVNPGPSTARLDYNFETALNKDMLQ 147
>gi|226504718|ref|NP_001150409.1| LOC100284039 [Zea mays]
gi|195639036|gb|ACG38986.1| protein SPATULA [Zea mays]
gi|414873439|tpg|DAA51996.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 255
Score = 165 bits (417), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 94/174 (54%), Positives = 114/174 (65%), Gaps = 8/174 (4%)
Query: 306 KRCKPNEGKANGNGAVKAEDEGDDK---QAKANNAKPPEPPK-DYIHVRARRGQATDSHS 361
KR K N+ +N G+++ E E D + +A + N EPPK DYIHVRARRGQATDSHS
Sbjct: 80 KRSKTNK-SSNNKGSLRTEVETDSRSAGKAVSKNIPAAEPPKQDYIHVRARRGQATDSHS 138
Query: 362 LAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMKLASVNT 421
LAER RREKISERMK+LQDLVPGCNKV GKA +LDEIINY+QSLQ QVEFLSMKL +VN
Sbjct: 139 LAERARREKISERMKVLQDLVPGCNKVIGKASVLDEIINYIQSLQCQVEFLSMKLEAVNA 198
Query: 422 RLELNVDALMSKDI-YQPNKPLPHSIFQIDSSASAFFSHQPQQNPALHGNISNG 474
+ V+ +KD Q P F D+ S ++ + LH I +G
Sbjct: 199 QANQGVEVFPAKDYGSQTYNTAPGLTF--DTQTSREYAQGTSTSEWLHMQIGSG 250
>gi|115461581|ref|NP_001054390.1| Os05g0103000 [Oryza sativa Japonica Group]
gi|57863903|gb|AAW56931.1| unknown protein [Oryza sativa Japonica Group]
gi|57863910|gb|AAS88824.2| unknown protein [Oryza sativa Japonica Group]
gi|113577941|dbj|BAF16304.1| Os05g0103000 [Oryza sativa Japonica Group]
gi|215686863|dbj|BAG89713.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222629873|gb|EEE62005.1| hypothetical protein OsJ_16787 [Oryza sativa Japonica Group]
gi|323388921|gb|ADX60265.1| bHLH transcription factor [Oryza sativa Japonica Group]
Length = 339
Score = 165 bits (417), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 93/171 (54%), Positives = 112/171 (65%), Gaps = 7/171 (4%)
Query: 283 AASPSVNNTTKVAEANASESSKNKR----CKPNEGKANGNGAVKAEDEGDDKQAKANNAK 338
+ P +T+ +A+ +S K+KR K E K + D DD + KA A
Sbjct: 112 GSCPCSLGSTQDMDASWGKSRKHKRSNVGLKGLEEKKARRVVLHQHD--DDVKKKAKEAA 169
Query: 339 PPEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEI 398
EPP YIHVRARRGQATDSHSLAERVRREKISERMK+LQ LVPGC+KVTGKALMLDEI
Sbjct: 170 GGEPPAGYIHVRARRGQATDSHSLAERVRREKISERMKMLQSLVPGCDKVTGKALMLDEI 229
Query: 399 INYVQSLQRQVEFLSMKLASVNTRL-ELNVDALMSKDIYQPNKPLPHSIFQ 448
I+YVQSLQ QVEFLSMKLAS++ + E M D+ + +PH + Q
Sbjct: 230 ISYVQSLQNQVEFLSMKLASLSPLMYEFGPGIDMHPDVLRQLAKMPHEMVQ 280
>gi|168056950|ref|XP_001780480.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668066|gb|EDQ54681.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 221
Score = 165 bits (417), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 82/104 (78%), Positives = 93/104 (89%), Gaps = 3/104 (2%)
Query: 334 ANNAKPPEPPK-DYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKA 392
A + +P + PK DYIHVRARRGQATDSHSLAERVRREKISERMK LQDLVPGC+KVTGKA
Sbjct: 48 ATSKRPQDFPKQDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCSKVTGKA 107
Query: 393 LMLDEIINYVQSLQRQVEFLSMKLASVNT-RLELNVDALMSKDI 435
+MLDEIINYVQSLQRQVEFLSMKLA+VN RL+ + D L+SK++
Sbjct: 108 VMLDEIINYVQSLQRQVEFLSMKLATVNVPRLDYSYD-LLSKEM 150
>gi|159505446|gb|ABW97699.1| putative bHLH transcription factor [Citrus sinensis]
Length = 370
Score = 165 bits (417), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 93/147 (63%), Positives = 103/147 (70%), Gaps = 9/147 (6%)
Query: 274 VSKGKGKETAASPSVNNTTKVAEANASESSKNKRCKPNEGKANGNGAVKAEDEGDDKQAK 333
+ K + T AS S N+ A++ K+K+ K K N N A K E E K A
Sbjct: 117 MDKKRKNRTNASSSFNS----AQSKDPREVKSKKQK----KGNVNDAKKEEKENSPK-AD 167
Query: 334 ANNAKPPEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKAL 393
+ EPPKDYIHVRARRGQATDSHSLAERVRREKISERMK+LQ LVPGC+KVTGKA
Sbjct: 168 SEKKVAKEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAF 227
Query: 394 MLDEIINYVQSLQRQVEFLSMKLASVN 420
MLDEIINYVQ LQ QVEFLSMKLASVN
Sbjct: 228 MLDEIINYVQFLQNQVEFLSMKLASVN 254
>gi|357516593|ref|XP_003628585.1| Transcription factor bHLH79 [Medicago truncatula]
gi|355522607|gb|AET03061.1| Transcription factor bHLH79 [Medicago truncatula]
Length = 278
Score = 165 bits (417), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 92/152 (60%), Positives = 105/152 (69%), Gaps = 8/152 (5%)
Query: 291 TTKVAEANASESSKNKRCKP----NEGKANGNGAVKAE-DEGDDKQAKANNAKPPEPPKD 345
+T ANA S KR K NEG G+G V+ E G + + P +D
Sbjct: 91 STSNGGANAVNDSDGKRTKASGNKNEG---GDGKVEGEASSGKHAEQSSKPPPSDPPKQD 147
Query: 346 YIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSL 405
YIHVRARRGQATDSHSLAER RREKISERMK+LQDLVPGCNKV GKAL+LDEIINY+QSL
Sbjct: 148 YIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSL 207
Query: 406 QRQVEFLSMKLASVNTRLELNVDALMSKDIYQ 437
QRQVEFLSMKL +VN+RL ++A KD Q
Sbjct: 208 QRQVEFLSMKLEAVNSRLNTGIEAFPPKDYGQ 239
>gi|242082417|ref|XP_002445977.1| hypothetical protein SORBIDRAFT_07g028945 [Sorghum bicolor]
gi|241942327|gb|EES15472.1| hypothetical protein SORBIDRAFT_07g028945 [Sorghum bicolor]
Length = 343
Score = 165 bits (417), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 97/191 (50%), Positives = 118/191 (61%), Gaps = 25/191 (13%)
Query: 257 SVSEQVPN-DFNSRKRK-----AVSKGKGKETAASPSVNNTTKVAEANASESSKNKRCKP 310
+ S +VP D NS KRK + + PSV+++ + E +A + P
Sbjct: 95 ACSSRVPEPDSNSNKRKRSNEDVLGMIGTDQDQGMPSVDSSKERGEDDAK---GKEETPP 151
Query: 311 NEGKANGNGAVKAEDEGDDKQAKANNAKPPEPPKDYIHVRARRGQATDSHSLAERVRREK 370
K G GA A+ E + YIHVRAR+GQAT+ HSLAER+RREK
Sbjct: 152 ATRKKKGKGASAADGESES----------------YIHVRARKGQATNRHSLAERLRREK 195
Query: 371 ISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMKLASVNTRLELNVDAL 430
ISERMKLLQDLVPGC KVTGKA+MLDEIINYVQSLQRQVEFLSMKLA+VN +L LN+ L
Sbjct: 196 ISERMKLLQDLVPGCTKVTGKAVMLDEIINYVQSLQRQVEFLSMKLAAVNPQLGLNIKQL 255
Query: 431 MSKDIYQPNKP 441
+SKD + P
Sbjct: 256 LSKDFCKKCAP 266
>gi|147774847|emb|CAN69076.1| hypothetical protein VITISV_004761 [Vitis vinifera]
Length = 302
Score = 165 bits (417), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 97/204 (47%), Positives = 124/204 (60%), Gaps = 17/204 (8%)
Query: 297 ANASESSKNKRCKPNEGKANGNGAVKAEDEGDDKQAKANNAKPPEPPK-DYIHVRARRGQ 355
N + KR K + G + N K E E + N + +PPK D+IHVRARRGQ
Sbjct: 99 GNVANDCDGKRLKTS-GSRDENRDSKTEVETSSGKPVEQNPQSADPPKQDFIHVRARRGQ 157
Query: 356 ATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMK 415
ATDSHSLAER RREKISERMK+LQDLVPGCNKV GKAL+LDEIINY+QSLQRQVEFLSMK
Sbjct: 158 ATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMK 217
Query: 416 LASVNTRLELNVDALMSKDIYQPNKPLPHSIFQIDSSASAFFSHQPQQNPALHGNISNGT 475
L +VN+R+ ++ SKD Q D++ A+ S ++ +G S+
Sbjct: 218 LEAVNSRMNSGIEGFPSKDFGQQT---------FDAAGVAYSSQATRE----YGRASSPE 264
Query: 476 MTQCPVDPLDNALCRNLSMQLPQL 499
+ LD LC N+ + P++
Sbjct: 265 WLH--MQQLDVLLCTNIQTEPPRV 286
>gi|225424835|ref|XP_002272776.1| PREDICTED: transcription factor BPE-like [Vitis vinifera]
Length = 277
Score = 164 bits (416), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 86/142 (60%), Positives = 101/142 (71%), Gaps = 2/142 (1%)
Query: 297 ANASESSKNKRCKPNEGKANGNGAVKAEDEGDDKQAKANNAKPPEPPK-DYIHVRARRGQ 355
N + KR K + G + N K E E + N + +PPK D+IHVRARRGQ
Sbjct: 99 GNVANDCDGKRLKTS-GSRDENRDSKTEVETSSGKPVEQNPQSADPPKQDFIHVRARRGQ 157
Query: 356 ATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMK 415
ATDSHSLAER RREKISERMK+LQDLVPGCNKV GKAL+LDEIINY+QSLQRQVEFLSMK
Sbjct: 158 ATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMK 217
Query: 416 LASVNTRLELNVDALMSKDIYQ 437
L +VN+R+ ++ SKD Q
Sbjct: 218 LEAVNSRMNSGIEGFPSKDFGQ 239
>gi|449458041|ref|XP_004146756.1| PREDICTED: transcription factor BPE-like [Cucumis sativus]
Length = 298
Score = 164 bits (416), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 102/197 (51%), Positives = 125/197 (63%), Gaps = 8/197 (4%)
Query: 248 ELANSQEESSVSEQVPNDFNSR--KRKAVSKGKGKETAASPSVNNTTKVAEANASES--- 302
++A E S ++ +P R VSK + SP V++T+ ANA+ S
Sbjct: 64 DIAIGNPEVSPTDSLPLQLQQRLPHGHGVSKKRRDSDQDSPKVSSTSNGNNANANSSAGN 123
Query: 303 -SKNKRCKPNEGKANGNGAVKAEDEGDDKQAKANNAKPPEPPK-DYIHVRARRGQATDSH 360
S KR K + + N K E E + + N+ PE PK DYIHVRARRGQATDSH
Sbjct: 124 DSGGKRVKTAACR-DDNHESKTEAEPRSGKTEQNSQPTPEQPKQDYIHVRARRGQATDSH 182
Query: 361 SLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMKLASVN 420
SLAER RREKISERMK+LQDLVPGCNKV GKAL+LDEIINY+QSLQRQVEFLSMKL +VN
Sbjct: 183 SLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVN 242
Query: 421 TRLELNVDALMSKDIYQ 437
+R+ ++ KD Q
Sbjct: 243 SRIGPGIEVFPPKDYGQ 259
>gi|79340401|ref|NP_172483.4| transcription factor bHLH74 [Arabidopsis thaliana]
gi|75291341|sp|Q6NKN9.1|BH074_ARATH RecName: Full=Transcription factor bHLH74; AltName: Full=Basic
helix-loop-helix protein 74; Short=AtbHLH74; Short=bHLH
74; AltName: Full=Transcription factor EN 90; AltName:
Full=bHLH transcription factor bHLH074
gi|46931340|gb|AAT06474.1| At1g10120 [Arabidopsis thaliana]
gi|62320956|dbj|BAD93978.1| bHLH transcription factor like protein [Arabidopsis thaliana]
gi|332190423|gb|AEE28544.1| transcription factor bHLH74 [Arabidopsis thaliana]
Length = 366
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 96/201 (47%), Positives = 123/201 (61%), Gaps = 50/201 (24%)
Query: 342 PPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINY 401
P ++YIH+RARRGQAT+SHSLAERVRREKISERM+LLQ+LVPGCNK+TGKA+MLDEIINY
Sbjct: 199 PKENYIHMRARRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINY 258
Query: 402 VQSLQRQVEFLSMKLASVNTRLELNVDALMSKDIYQP---NKPL----PHSIFQIDSSAS 454
VQSLQ+QVEFLSMKLA+VN + +++D +++KD+ Q N P P + FQ
Sbjct: 259 VQSLQQQVEFLSMKLATVNPEINIDIDRILAKDLLQSRDRNTPTLGLNPFAGFQ------ 312
Query: 455 AFFSHQPQQNPALHGNISNGTMTQCPVDPLDNALCRNLSMQLPQLEQFTETIPQFQNFGE 514
GNI N + T P Q+ P Q E
Sbjct: 313 --------------GNIPNLSATTNP--------------------QYN---PLPQTTLE 335
Query: 515 DDLQSIVQMGFGQNPNSETSL 535
+LQ++ QMGF NP++ +S
Sbjct: 336 SELQNLYQMGFVSNPSTMSSF 356
>gi|125526612|gb|EAY74726.1| hypothetical protein OsI_02617 [Oryza sativa Indica Group]
Length = 386
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 116/283 (40%), Positives = 142/283 (50%), Gaps = 69/283 (24%)
Query: 300 SESSKNKRCKPNEGKAN--GNGAVKAEDEGDDKQAKANNAKPPEPPKDYIHVRARRGQAT 357
++++ ++ KP G A GNG K D EPPKDYIHVRARRGQAT
Sbjct: 118 ADAAGDEDTKPVAGDAGHGGNGKGKVLDAAG------------EPPKDYIHVRARRGQAT 165
Query: 358 DSHSLAERV--------------------------------RREKISERMKLLQDLVPGC 385
DSHSLAERV RREKISERMKLLQDLVPGC
Sbjct: 166 DSHSLAERVKAAGIDAANHNFFFSSILAFADAIAAVFHLQVRREKISERMKLLQDLVPGC 225
Query: 386 NKV--------------TGKALMLDEIINYVQSLQRQVEFLSMKLASVNTRLELNVDALM 431
NKV TGKA+MLDEIINYVQSLQRQVEFLSMKL++VN +L+ +VD +
Sbjct: 226 NKVAKFSQKINLNFTLVTGKAVMLDEIINYVQSLQRQVEFLSMKLSTVNPQLDFDVDNFI 285
Query: 432 SKDIYQPNKPLPHSIFQIDSSASAFFSHQPQQNPALHGNISNGTMTQCPVDP---LDNA- 487
KD + P+ + + +P + S GT Q V L+ A
Sbjct: 286 PKD---ASDPIMPAPLSLPPPPPPLSYSPEGASPGICYASSQGTAMQSVVTSTKHLETAP 342
Query: 488 -LCRNLSMQLPQLEQFTETIPQFQN-FGEDDLQSIVQMGFGQN 528
+ + +P L+ F Q + EDDLQS+VQMGF N
Sbjct: 343 TFANHHVIPVPSLDGFHSAHSQAGSCMWEDDLQSVVQMGFRGN 385
>gi|296086467|emb|CBI32056.3| unnamed protein product [Vitis vinifera]
Length = 208
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 86/142 (60%), Positives = 101/142 (71%), Gaps = 2/142 (1%)
Query: 297 ANASESSKNKRCKPNEGKANGNGAVKAEDEGDDKQAKANNAKPPEPPK-DYIHVRARRGQ 355
N + KR K + G + N K E E + N + +PPK D+IHVRARRGQ
Sbjct: 30 GNVANDCDGKRLKTS-GSRDENRDSKTEVETSSGKPVEQNPQSADPPKQDFIHVRARRGQ 88
Query: 356 ATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMK 415
ATDSHSLAER RREKISERMK+LQDLVPGCNKV GKAL+LDEIINY+QSLQRQVEFLSMK
Sbjct: 89 ATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMK 148
Query: 416 LASVNTRLELNVDALMSKDIYQ 437
L +VN+R+ ++ SKD Q
Sbjct: 149 LEAVNSRMNSGIEGFPSKDFGQ 170
>gi|297843798|ref|XP_002889780.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297335622|gb|EFH66039.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 140
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 73/101 (72%), Positives = 90/101 (89%)
Query: 341 EPPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIIN 400
EP + YIH+RARRGQAT+SHSLAERVRREKISERM+LLQ+LVPGCNK+TGKA MLDEIIN
Sbjct: 40 EPKEKYIHMRARRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAFMLDEIIN 99
Query: 401 YVQSLQRQVEFLSMKLASVNTRLELNVDALMSKDIYQPNKP 441
Y+QSLQ+QVEFLSMKLA+VN + +++D +++KD+ N P
Sbjct: 100 YIQSLQQQVEFLSMKLATVNPDINIDIDRILAKDVRAQNPP 140
>gi|358347900|ref|XP_003637988.1| Transcription factor BPE [Medicago truncatula]
gi|355503923|gb|AES85126.1| Transcription factor BPE [Medicago truncatula]
Length = 249
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 91/150 (60%), Positives = 105/150 (70%), Gaps = 8/150 (5%)
Query: 291 TTKVAEANASESSKNKRCKP----NEGKANGNGAVKAE-DEGDDKQAKANNAKPPEPPKD 345
+T ANA S KR K NEG G+G V+ E G + + P +D
Sbjct: 91 STSNGGANAVNDSDGKRTKASGNKNEG---GDGKVEGEASSGKHAEQSSKPPPSDPPKQD 147
Query: 346 YIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSL 405
YIHVRARRGQATDSHSLAER RREKISERMK+LQDLVPGCNKV GKAL+LDEIINY+QSL
Sbjct: 148 YIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSL 207
Query: 406 QRQVEFLSMKLASVNTRLELNVDALMSKDI 435
QRQVEFLSMKL +VN+RL ++A KD+
Sbjct: 208 QRQVEFLSMKLEAVNSRLNTGIEAFPPKDV 237
>gi|110738493|dbj|BAF01172.1| bHLH transcription factor like protein [Arabidopsis thaliana]
Length = 314
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 96/201 (47%), Positives = 123/201 (61%), Gaps = 50/201 (24%)
Query: 342 PPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINY 401
P ++YIH+RARRGQAT+SHSLAERVRREKISERM+LLQ+LVPGCNK+TGKA+MLDEIINY
Sbjct: 147 PKENYIHMRARRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINY 206
Query: 402 VQSLQRQVEFLSMKLASVNTRLELNVDALMSKDIYQP---NKPL----PHSIFQIDSSAS 454
VQSLQ+QVEFLSMKLA+VN + +++D +++KD+ Q N P P + FQ
Sbjct: 207 VQSLQQQVEFLSMKLATVNPEINIDIDRILAKDLLQSRDRNTPTLGLNPFAGFQ------ 260
Query: 455 AFFSHQPQQNPALHGNISNGTMTQCPVDPLDNALCRNLSMQLPQLEQFTETIPQFQNFGE 514
GNI N + T P Q+ P Q E
Sbjct: 261 --------------GNIPNLSATTNP--------------------QYN---PLPQTTLE 283
Query: 515 DDLQSIVQMGFGQNPNSETSL 535
+LQ++ QMGF NP++ +S
Sbjct: 284 SELQNLYQMGFVSNPSTMSSF 304
>gi|242032639|ref|XP_002463714.1| hypothetical protein SORBIDRAFT_01g004710 [Sorghum bicolor]
gi|241917568|gb|EER90712.1| hypothetical protein SORBIDRAFT_01g004710 [Sorghum bicolor]
Length = 253
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 97/174 (55%), Positives = 115/174 (66%), Gaps = 8/174 (4%)
Query: 306 KRCKPNEGKANGNGAVKAEDEGDDKQA-KANNAKPP--EPPK-DYIHVRARRGQATDSHS 361
KR K N+ +N NG+++ E E D + A KA + P EPPK DYIHVRARRGQATDSHS
Sbjct: 78 KRSKTNK-SSNNNGSLRTEAETDPRSAGKAVSKSLPAAEPPKQDYIHVRARRGQATDSHS 136
Query: 362 LAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMKLASVNT 421
LAER RREKISERMK+LQDLVPGCNKV GKA +LDEIINY+QSLQ QVEFLSMKL +VN
Sbjct: 137 LAERARREKISERMKVLQDLVPGCNKVIGKASVLDEIINYIQSLQCQVEFLSMKLEAVNA 196
Query: 422 RLELNVDALMSKDI-YQPNKPLPHSIFQIDSSASAFFSHQPQQNPALHGNISNG 474
V+A KD + P F D+ S ++ + LH I +G
Sbjct: 197 HANQGVEAFPVKDYGAETYNTAPGLTF--DTQTSREYAQGTSTSEWLHMQIGSG 248
>gi|388504966|gb|AFK40549.1| unknown [Medicago truncatula]
Length = 278
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 91/152 (59%), Positives = 104/152 (68%), Gaps = 8/152 (5%)
Query: 291 TTKVAEANASESSKNKRCKP----NEGKANGNGAVKAE-DEGDDKQAKANNAKPPEPPKD 345
+T ANA S KR K NEG G+G V+ E G + + P +D
Sbjct: 91 STSNGGANAVNDSDGKRTKASGNKNEG---GDGKVEGEASSGKHAEQSSKPPPSDPPKQD 147
Query: 346 YIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSL 405
YIHVRARRGQATDSH LAER RREKISERMK+LQDLVPGCNKV GKAL+LDEIINY+QSL
Sbjct: 148 YIHVRARRGQATDSHGLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSL 207
Query: 406 QRQVEFLSMKLASVNTRLELNVDALMSKDIYQ 437
QRQVEFLSMKL +VN+RL ++A KD Q
Sbjct: 208 QRQVEFLSMKLEAVNSRLNTGIEAFPPKDYGQ 239
>gi|50509096|dbj|BAD30156.1| putative bHLH protein [Oryza sativa Japonica Group]
Length = 268
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 94/179 (52%), Positives = 116/179 (64%), Gaps = 28/179 (15%)
Query: 284 ASPSVNNTTKVAEANA-----------SESSKNKRCKPNEGKANGNGAVKAE---DEGDD 329
A P ++ +KV +A S++ + KR KP + ++ N +++ E D G+
Sbjct: 49 AGPEDDDLSKVVSTSAASGGGGGGGQDSDAPEAKRLKPMKS-SDKNDSLRTEAGTDSGNS 107
Query: 330 KQAKANNAKPPEPPK-DYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKV 388
+A NA PPEPPK DYIHVRARRGQATDSHSLAER RREKISERMK+LQDLVPGCNKV
Sbjct: 108 SKAADKNATPPEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKV 167
Query: 389 TGKALMLDEIINYVQSLQRQVE------------FLSMKLASVNTRLELNVDALMSKDI 435
GKA +LDEIINY+QSLQ QVE FLSMKL +VN+ + + A SKD
Sbjct: 168 IGKASVLDEIINYIQSLQHQVEFMFKYLIELFLQFLSMKLEAVNSHMINGIVAFPSKDF 226
>gi|414872588|tpg|DAA51145.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 209
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 90/186 (48%), Positives = 130/186 (69%), Gaps = 13/186 (6%)
Query: 331 QAKANNAKPPEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTG 390
Q+K +++ +DY+H+RA+RGQAT+SHSLAER+RR+KISERMKLLQDLVPGC+K+TG
Sbjct: 13 QSKEDSSDGDGTKEDYVHIRAKRGQATNSHSLAERLRRKKISERMKLLQDLVPGCSKITG 72
Query: 391 KALMLDEIINYVQSLQRQVEFLSMKLASVNTRLELNVDALMSKD-IYQPNKPLPHSIFQI 449
KA+MLDEIINYVQSLQRQVEFLSMKL++VN L +++ ++SK + ++ L + + +
Sbjct: 73 KAVMLDEIINYVQSLQRQVEFLSMKLSTVNPELGFDIEQIISKQMMLSQDRHL--AFYGV 130
Query: 450 DSSASAFFS--HQPQQNPALHGNISNGTMTQCPVDPLDNALCRNLSM-QLPQLEQFTETI 506
D +S+ + +Q PA+ NISN P D L + +M Q+P + + +++
Sbjct: 131 DPGSSSLTAPFNQGIVQPAMMCNISN------PADVLHGTIHDVSTMNQIPSMWEGLQSM 184
Query: 507 PQFQNF 512
PQ NF
Sbjct: 185 PQM-NF 189
>gi|255540091|ref|XP_002511110.1| DNA binding protein, putative [Ricinus communis]
gi|223550225|gb|EEF51712.1| DNA binding protein, putative [Ricinus communis]
Length = 422
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 86/137 (62%), Positives = 100/137 (72%), Gaps = 5/137 (3%)
Query: 302 SSKNKRCKPNEGKANGNGAVKAEDEGDDKQAKANNAKPP--EPPKDYIHVRARRGQATDS 359
S+++K + GK + +++ K K + K P EPP YIHVRARRGQATDS
Sbjct: 123 SAQSKDARDGRGKKQKKCNNEVKEDKKPKAEKKDQKKVPDQEPPTGYIHVRARRGQATDS 182
Query: 360 HSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMKLASV 419
HSLAERVRREKISERMK+LQ LVPGC+KVTGKALMLDEIINYVQSLQ QVEFLSMKLASV
Sbjct: 183 HSLAERVRREKISERMKILQRLVPGCDKVTGKALMLDEIINYVQSLQNQVEFLSMKLASV 242
Query: 420 N---TRLELNVDALMSK 433
N ++ DALM +
Sbjct: 243 NPLFYDFGMDFDALMVR 259
>gi|158147058|gb|ABW22630.1| bHLH transcription factor Upa20 [Capsicum annuum]
gi|158147060|gb|ABW22631.1| bHLH transcription factor Upa20 [Capsicum annuum]
gi|158147061|gb|ABW22632.1| bHLH transcription factor Upa20 [Capsicum annuum]
Length = 340
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 95/163 (58%), Positives = 112/163 (68%), Gaps = 16/163 (9%)
Query: 277 GKGKETAASPSVNNTTKVAEANASESSKNKR--CKPNEGKAN-GNGAVKAEDEGDDKQAK 333
G K SP ++ K E ++S +S N + + + GK N N + A+DE K
Sbjct: 99 GNNKPNVTSP-MDKKRKSREGSSSMTSANSKNVTQGDNGKKNKSNSKLVAKDE-----KK 152
Query: 334 ANNAKPPEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKAL 393
AN E P YIHVRARRGQATDSHSLAERVRREKISERMK+LQ LVPGC+KVTGKAL
Sbjct: 153 ANE----EAPTGYIHVRARRGQATDSHSLAERVRREKISERMKMLQSLVPGCDKVTGKAL 208
Query: 394 MLDEIINYVQSLQRQVEFLSMKLASVN---TRLELNVDALMSK 433
MLDEIINYVQSLQ QVEFLSMKLAS+N +++DALM +
Sbjct: 209 MLDEIINYVQSLQNQVEFLSMKLASLNPMYYDFGMDLDALMVR 251
>gi|449533777|ref|XP_004173848.1| PREDICTED: transcription factor BPE-like, partial [Cucumis sativus]
Length = 174
Score = 162 bits (411), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 75/99 (75%), Positives = 85/99 (85%)
Query: 339 PPEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEI 398
P +P +DYIHVRARRGQATDSHSLAER RREKISERMK+LQDLVPGCNKV GKAL+LDEI
Sbjct: 37 PEQPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEI 96
Query: 399 INYVQSLQRQVEFLSMKLASVNTRLELNVDALMSKDIYQ 437
INY+QSLQRQVEFLSMKL +VN+R+ ++ KD Q
Sbjct: 97 INYIQSLQRQVEFLSMKLEAVNSRIGPGIEVFPPKDYGQ 135
>gi|110741191|dbj|BAF02146.1| bHLH transcription factor like protein [Arabidopsis thaliana]
Length = 366
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 95/201 (47%), Positives = 122/201 (60%), Gaps = 50/201 (24%)
Query: 342 PPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINY 401
P ++YIH+RARRGQAT+SHSLAERVRREKISERM+LLQ+L PGCNK+TGKA+MLDEIINY
Sbjct: 199 PKENYIHMRARRGQATNSHSLAERVRREKISERMRLLQELAPGCNKITGKAVMLDEIINY 258
Query: 402 VQSLQRQVEFLSMKLASVNTRLELNVDALMSKDIYQP---NKPL----PHSIFQIDSSAS 454
VQSLQ+QVEFLSMKLA+VN + +++D +++KD+ Q N P P + FQ
Sbjct: 259 VQSLQQQVEFLSMKLATVNPEINIDIDRILAKDLLQSRDRNTPTLGLNPFAGFQ------ 312
Query: 455 AFFSHQPQQNPALHGNISNGTMTQCPVDPLDNALCRNLSMQLPQLEQFTETIPQFQNFGE 514
GNI N + T P Q+ P Q E
Sbjct: 313 --------------GNIPNLSATTNP--------------------QYN---PLPQTTLE 335
Query: 515 DDLQSIVQMGFGQNPNSETSL 535
+LQ++ QMGF NP++ +S
Sbjct: 336 SELQNLYQMGFVSNPSTMSSF 356
>gi|297795891|ref|XP_002865830.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297311665|gb|EFH42089.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 281
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 86/134 (64%), Positives = 93/134 (69%), Gaps = 4/134 (2%)
Query: 290 NTTKVAEANASESSKNKRCKPNEGKANGNGA--VKAEDEGDD--KQAKANNAKPPEPPKD 345
NTTK A +S GK G A V EG + K K EPPKD
Sbjct: 74 NTTKTATTRSSSCDHGSSAITTIGKKRGRKARNVSNSKEGVEGTKSKKQKRGSKEEPPKD 133
Query: 346 YIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSL 405
YIHVRARRGQATDSHSLAERVRREKISERM+ LQ+LVPGC+KVTGKALMLDEIINYVQ+L
Sbjct: 134 YIHVRARRGQATDSHSLAERVRREKISERMRTLQNLVPGCDKVTGKALMLDEIINYVQTL 193
Query: 406 QRQVEFLSMKLASV 419
Q QVEFLSMKL S+
Sbjct: 194 QNQVEFLSMKLTSI 207
>gi|413933172|gb|AFW67723.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 284
Score = 162 bits (409), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 89/186 (47%), Positives = 126/186 (67%), Gaps = 13/186 (6%)
Query: 331 QAKANNAKPPEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTG 390
Q+K +++ +DY+H+RA+RGQAT+SHSLAER+RR+KISERMKLLQDLVPGC+K+TG
Sbjct: 88 QSKEDSSDGDGTKEDYVHIRAKRGQATNSHSLAERLRRKKISERMKLLQDLVPGCSKITG 147
Query: 391 KALMLDEIINYVQSLQRQVEFLSMKLASVNTRLELNVDALMSKD-IYQPNKPLPHSIFQI 449
KA+MLDEIINYVQSLQRQVEFLSMKLA+VN L +++ ++SK + ++ L + + +
Sbjct: 148 KAVMLDEIINYVQSLQRQVEFLSMKLATVNPELGFDIEQIISKQMLLSQDRHL--AFYGV 205
Query: 450 DSSASAFFS--HQPQQNPALHGNISNGTMTQCPVDPLDNALCRNLSM-QLPQLEQFTETI 506
+ +S +Q P L I+N PVD L A+ +M +P + + + +
Sbjct: 206 EPGSSGLTGPFNQGIMQPELMCTIAN------PVDVLHGAIHDASTMNHIPSMWEGLQNM 259
Query: 507 PQFQNF 512
PQ NF
Sbjct: 260 PQM-NF 264
>gi|356509797|ref|XP_003523632.1| PREDICTED: transcription factor bHLH74-like [Glycine max]
Length = 376
Score = 162 bits (409), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 118/306 (38%), Positives = 160/306 (52%), Gaps = 74/306 (24%)
Query: 154 MPLNSSVAEFSADPGFAERAARFSRFG-SRSFNGRSTGQFVPNHNPDQFGLSRSNNNPNP 212
M +S ++ +D F A + FG + S++ +TG ++PNHNP
Sbjct: 76 MNCDSHFVQYVSDSNFEHMALKVPSFGQTGSYDIANTG-YLPNHNPS------------- 121
Query: 213 MTANEKLPRVSSSPSLKVLGSQAQATGNKSPQDRSELANSQ---EESSVSEQVPNDFNSR 269
N+S +RS + N Q E S+ E D + R
Sbjct: 122 ---------------------------NESGMERSPINNEQSKLEGSTSEEGAAPDEHKR 154
Query: 270 KRKAVSKGKGKETAASPSVNNTTKVAEANASESSKNKRC----------KPNEGK---AN 316
KR G + + S N K AE A + S K C KP + AN
Sbjct: 155 KR-------GLDYNFTFSSN---KNAEGEALKDSSGKSCDDDVKEQCEKKPRVAQNSTAN 204
Query: 317 GNGAVKAEDEGDDKQAKANNAKPPEPPKDYIHVRARRGQATDSHSLAERVRREKISERMK 376
G + + DD +++ + + ++IHVRARRGQAT+SHSLAERVRREKISERM+
Sbjct: 205 LCGKQLLKQKKDDSESEEGSKE------NFIHVRARRGQATNSHSLAERVRREKISERMR 258
Query: 377 LLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMKLASVNTRLELNVDALMSKDIY 436
LLQ+LVPGC+K TGKA+MLDEIINYVQSLQ+QVEFLSMKLA+VN +L NV+ + SKD +
Sbjct: 259 LLQELVPGCDKKTGKAVMLDEIINYVQSLQQQVEFLSMKLATVNPQLNFNVEQICSKDSH 318
Query: 437 QPNKPL 442
+ P+
Sbjct: 319 IGHGPI 324
>gi|125562347|gb|EAZ07795.1| hypothetical protein OsI_30053 [Oryza sativa Indica Group]
gi|125604159|gb|EAZ43484.1| hypothetical protein OsJ_28098 [Oryza sativa Japonica Group]
Length = 291
Score = 161 bits (408), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 98/204 (48%), Positives = 125/204 (61%), Gaps = 33/204 (16%)
Query: 285 SPSVNNTTKVAEANASESSKNKRCKPNEGKANGNGAVKAEDEGDDKQAKANNAKPPEPPK 344
SPSV+ K AE +A K K GK KA E ++K + EPPK
Sbjct: 71 SPSVDRKRKAAEDSAHSKDSCKDGKSRRGK-------KASKEVEEKSTTED-----EPPK 118
Query: 345 DYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQS 404
YIHVRARRGQATDSHSLAERVRRE+ISERM++LQ LVPGC+KVTGKAL+LDEIINYVQS
Sbjct: 119 GYIHVRARRGQATDSHSLAERVRRERISERMRMLQALVPGCDKVTGKALILDEIINYVQS 178
Query: 405 LQRQVEFLSMKLASVNTRLE---LNVDALMSKDI---YQPNKPLPHSIFQ---------- 448
LQ QVEFLSM++AS++ L ++ D L + I +Q +P+ +
Sbjct: 179 LQNQVEFLSMRIASMSPVLYGFGMDSDGLHDQKIGGMFQEALAMPNPVLNQSSPAPSQAI 238
Query: 449 IDSSASAFFSHQPQQNPALHGNIS 472
+D++++ +S Q Q HG IS
Sbjct: 239 MDTTSTTSYSLQSQ-----HGAIS 257
>gi|356562791|ref|XP_003549652.1| PREDICTED: transcription factor bHLH79-like [Glycine max]
Length = 229
Score = 161 bits (408), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 89/149 (59%), Positives = 108/149 (72%), Gaps = 13/149 (8%)
Query: 299 ASESSKNKRCKPN-EGKANGNGAVKAEDEGDDKQAKAN-----NAKP---PEPPK-DYIH 348
+++ NK K + G + NGA+KA E D N AKP +PPK DYIH
Sbjct: 41 STDCGSNKHIKSSGSGSQDQNGALKA-GEVDATSVAGNKLPEQTAKPSSSEQPPKQDYIH 99
Query: 349 VRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQ 408
VRARRGQATDSHSLAER RREKISERMK+LQD+VPGCNKV GKAL+LDEIINY+QSLQ Q
Sbjct: 100 VRARRGQATDSHSLAERARREKISERMKILQDIVPGCNKVIGKALVLDEIINYIQSLQHQ 159
Query: 409 VEFLSMKLASVNTRLELN--VDALMSKDI 435
VEFLSMKL +VN+RL ++ ++ SK++
Sbjct: 160 VEFLSMKLEAVNSRLSMSPTIECFPSKEV 188
>gi|357117083|ref|XP_003560304.1| PREDICTED: transcription factor bHLH74-like isoform 1 [Brachypodium
distachyon]
Length = 326
Score = 161 bits (408), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 89/185 (48%), Positives = 120/185 (64%), Gaps = 12/185 (6%)
Query: 331 QAKANNAKPPEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTG 390
Q+K +++ +DY+H+RA+RGQAT+SHSLAER+RR+KISERMKLLQDLVPGC+K+TG
Sbjct: 128 QSKEDSSDGDGTKEDYVHIRAKRGQATNSHSLAERLRRKKISERMKLLQDLVPGCSKITG 187
Query: 391 KALMLDEIINYVQSLQRQVEFLSMKLASVNTRLELNVDALMSKDIYQPNKPLPHSIFQID 450
KA+MLDEIINYVQSLQRQVEFLSMKLA+VN L +++ ++SK + H F
Sbjct: 188 KAVMLDEIINYVQSLQRQVEFLSMKLATVNPELGFDIEQILSKQMMLSQD--RHLAFYGA 245
Query: 451 SSASAFFSH--QPQQNPALHGNISNGTMTQCPVDPLDNALCRNLSM-QLPQLEQFTETIP 507
S+ +H Q P + N+SN P L +M Q+P++ + + IP
Sbjct: 246 DPGSSTLAHFNQGIMQPDMMCNVSN------PAGVLHGTFHEISAMNQMPEMWEALQNIP 299
Query: 508 QFQNF 512
NF
Sbjct: 300 DM-NF 303
>gi|390979910|gb|AFM30927.1| basic helix-loop-helix [Solanum lycopersicum]
Length = 330
Score = 161 bits (408), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 87/134 (64%), Positives = 98/134 (73%), Gaps = 12/134 (8%)
Query: 303 SKNKRCKPNEGKANGNGAVKAEDEGDDKQAKANNAKPPEPPKDYIHVRARRGQATDSHSL 362
SKN++ N K N + A+DE KAN E P YIHVRARRGQATDSHSL
Sbjct: 116 SKNEKQGDNGKKKKINSKLVAKDE-----KKANE----EAPTGYIHVRARRGQATDSHSL 166
Query: 363 AERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMKLASVN-- 420
AERVRREKISERMK+LQ LVPGC+KVTGKALMLDEIINYVQSLQ QVEFLSMKL S+N
Sbjct: 167 AERVRREKISERMKILQSLVPGCDKVTGKALMLDEIINYVQSLQNQVEFLSMKLTSLNPM 226
Query: 421 -TRLELNVDALMSK 433
+++DALM +
Sbjct: 227 YYDFGMDLDALMVR 240
>gi|18423212|ref|NP_568745.1| transcription factor bHLH137 [Arabidopsis thaliana]
gi|30695963|ref|NP_851163.1| transcription factor bHLH137 [Arabidopsis thaliana]
gi|75305763|sp|Q93W88.1|BH137_ARATH RecName: Full=Transcription factor bHLH137; AltName: Full=Basic
helix-loop-helix protein 137; Short=AtbHLH137;
Short=bHLH 137; AltName: Full=Transcription factor EN
89; AltName: Full=bHLH transcription factor bHLH137
gi|16226850|gb|AAL16280.1|AF428350_1 unknown protein [Arabidopsis thaliana]
gi|15982883|gb|AAL09788.1| probable DNA-binding protein [Arabidopsis thaliana]
gi|21360503|gb|AAM47367.1| At5g50917/At5g50917 [Arabidopsis thaliana]
gi|21593195|gb|AAM65144.1| unknown [Arabidopsis thaliana]
gi|332008626|gb|AED96009.1| transcription factor bHLH137 [Arabidopsis thaliana]
gi|332008627|gb|AED96010.1| transcription factor bHLH137 [Arabidopsis thaliana]
Length = 286
Score = 161 bits (407), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 88/146 (60%), Positives = 100/146 (68%), Gaps = 7/146 (4%)
Query: 281 ETAASPSVNNTTKVAEANAS---ESSKNKRCKPNEGKANGNGAVKAED--EGDD--KQAK 333
E + S + NTTK A +S + S N GK G A + + EG + K K
Sbjct: 61 ENSGSEKLANTTKTATTGSSSCDQLSHGPSAITNTGKTRGRKARNSNNSKEGVEGRKSKK 120
Query: 334 ANNAKPPEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKAL 393
EPP DYIHVRARRGQATDSHSLAERVRREKISERM+ LQ+LVPGC+KVTGKAL
Sbjct: 121 QKRGSKEEPPTDYIHVRARRGQATDSHSLAERVRREKISERMRTLQNLVPGCDKVTGKAL 180
Query: 394 MLDEIINYVQSLQRQVEFLSMKLASV 419
MLDEIINYVQ+LQ QVEFLSMKL S+
Sbjct: 181 MLDEIINYVQTLQTQVEFLSMKLTSI 206
>gi|359494803|ref|XP_003634844.1| PREDICTED: transcription factor bHLH74-like [Vitis vinifera]
gi|296090643|emb|CBI41042.3| unnamed protein product [Vitis vinifera]
Length = 415
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 72/96 (75%), Positives = 86/96 (89%)
Query: 342 PPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINY 401
P +DYIHVRA+RGQAT+SHSLAERVRRE+ISERMK LQDLVPGCNK+TGKA+MLDEIINY
Sbjct: 239 PKEDYIHVRAKRGQATNSHSLAERVRRERISERMKFLQDLVPGCNKITGKAVMLDEIINY 298
Query: 402 VQSLQRQVEFLSMKLASVNTRLELNVDALMSKDIYQ 437
VQSLQRQVEFLSMKLA+V + + ++ ++S DI+
Sbjct: 299 VQSLQRQVEFLSMKLATVYPEMNVQIERILSSDIHH 334
>gi|225456461|ref|XP_002284464.1| PREDICTED: transcription factor bHLH137 [Vitis vinifera]
gi|297734492|emb|CBI15739.3| unnamed protein product [Vitis vinifera]
Length = 349
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 79/96 (82%), Positives = 84/96 (87%), Gaps = 3/96 (3%)
Query: 341 EPPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIIN 400
EPP YIHVRARRGQATDSHSLAERVRREKISERMKLLQ LVPGC+KVTGKALMLDEIIN
Sbjct: 163 EPPTGYIHVRARRGQATDSHSLAERVRREKISERMKLLQALVPGCDKVTGKALMLDEIIN 222
Query: 401 YVQSLQRQVEFLSMKLASVNTRLE---LNVDALMSK 433
YVQSLQ QVEFLSMKLASVN +++DALM +
Sbjct: 223 YVQSLQNQVEFLSMKLASVNPMFYDFGMDLDALMVR 258
>gi|224119176|ref|XP_002318005.1| predicted protein [Populus trichocarpa]
gi|222858678|gb|EEE96225.1| predicted protein [Populus trichocarpa]
Length = 272
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 100/194 (51%), Positives = 127/194 (65%), Gaps = 20/194 (10%)
Query: 252 SQEESSVSEQVPNDFNS-RKRKAVSKGKGKETAASPSVNNTTKVAEANASESSKNKRCKP 310
S +ES+V+EQ + N RK + +S +E +S V+ TT + N N + +
Sbjct: 48 SVDESTVTEQRGGNRNGNRKARDLSS---EEDDSSIMVSTTTSAHDLN----DLNGKRRK 100
Query: 311 NEGKANGNGAVKAEDEGDDKQAKANN------AKPPEPP-KDYIHVRARRGQATDSHSLA 363
G N N +AE E + ANN +KP EPP +DYIHVR+RRGQATDSHSLA
Sbjct: 101 ISGSRNENNDSRAEIEA---SSAANNKPAEPSSKPSEPPMQDYIHVRSRRGQATDSHSLA 157
Query: 364 ERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMKLASVNTRL 423
ER RRE+I ERMK+LQDLVPGCNKV GKAL LDEIINY+QSLQ QVEFLSMKL +VN+R+
Sbjct: 158 ERARRERIGERMKILQDLVPGCNKVIGKALALDEIINYIQSLQCQVEFLSMKLEAVNSRM 217
Query: 424 ELN--VDALMSKDI 435
+ ++ L KD+
Sbjct: 218 STSPAIEGLHPKDL 231
>gi|357117085|ref|XP_003560305.1| PREDICTED: transcription factor bHLH74-like isoform 2 [Brachypodium
distachyon]
Length = 317
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 89/185 (48%), Positives = 120/185 (64%), Gaps = 12/185 (6%)
Query: 331 QAKANNAKPPEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTG 390
Q+K +++ +DY+H+RA+RGQAT+SHSLAER+RR+KISERMKLLQDLVPGC+K+TG
Sbjct: 122 QSKEDSSDGDGTKEDYVHIRAKRGQATNSHSLAERLRRKKISERMKLLQDLVPGCSKITG 181
Query: 391 KALMLDEIINYVQSLQRQVEFLSMKLASVNTRLELNVDALMSKDIYQPNKPLPHSIFQID 450
KA+MLDEIINYVQSLQRQVEFLSMKLA+VN L +++ ++SK + H F
Sbjct: 182 KAVMLDEIINYVQSLQRQVEFLSMKLATVNPELGFDIEQILSKQMMLSQD--RHLAFYGA 239
Query: 451 SSASAFFSH--QPQQNPALHGNISNGTMTQCPVDPLDNALCRNLSM-QLPQLEQFTETIP 507
S+ +H Q P + N+SN P L +M Q+P++ + + IP
Sbjct: 240 DPGSSTLAHFNQGIMQPDMMCNVSN------PAGVLHGTFHEISAMNQMPEMWEALQNIP 293
Query: 508 QFQNF 512
NF
Sbjct: 294 DM-NF 297
>gi|297735141|emb|CBI17503.3| unnamed protein product [Vitis vinifera]
Length = 366
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 111/261 (42%), Positives = 144/261 (55%), Gaps = 24/261 (9%)
Query: 273 AVSKGKGKETAASPSVNNTTKVAEANASESSKNKRCKPNEGKANGNGAVKAEDEGDDKQA 332
A + G+E A SV + AE +E K+++ K +E + K + +
Sbjct: 121 AATSVDGRELAGRNSVKK--RKAEVALTEECKDQKIKRDEEEEESKIEEKHSEISPNASK 178
Query: 333 KANNAKPPEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKA 392
+ + KP DYIHVRARRGQATDSHSLAER RREKIS++MK LQDLVPGCNK+TGKA
Sbjct: 179 VSGSPKP-----DYIHVRARRGQATDSHSLAERARREKISKKMKYLQDLVPGCNKITGKA 233
Query: 393 LMLDEIINYVQSLQRQVEFLSMKLASVNTRLELNVDALMSKDIYQPNKPLPHSIFQIDSS 452
MLDEIINYVQSLQRQVEFLS+KLA++N R + N+D + K+ P + +
Sbjct: 234 GMLDEIINYVQSLQRQVEFLSLKLATMNPRTDFNLDTFLGKE-------FPAYVAAGFPT 286
Query: 453 ASAFFSHQPQQNPALHGNISNGTMTQC----PVDPLDNALCRNLSMQLPQLEQFT--ETI 506
A+A S + P L +T C P+DP +AL S E FT +
Sbjct: 287 AAA--SSEMANLPFLQFQPVPQGITSCELHMPIDPPQSALQMTTSSSTSVPEMFTNSTSF 344
Query: 507 PQFQNF--GEDDLQSIVQMGF 525
Q Q F + DLQS+ F
Sbjct: 345 SQVQPFTTWDTDLQSLYTGEF 365
>gi|295913657|gb|ADG58071.1| transcription factor [Lycoris longituba]
Length = 258
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 86/161 (53%), Positives = 109/161 (67%), Gaps = 8/161 (4%)
Query: 283 AASPSVNNTTKVA------EANASESSKNKRCKPNEGKANGNGAVKAEDEGD--DKQAKA 334
+A PS + ++K+ +A SE+ + K K +G N N +AE +K A
Sbjct: 57 SAPPSEDESSKIMSTSSGNDATDSEAKRLKGMKSGDGNENSNSKTEAEASSGLCNKLADQ 116
Query: 335 NNAKPPEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALM 394
+N P +DYIHVRARRGQATDSHSLAER RREKISERM +LQDLVPGCNKV GKA +
Sbjct: 117 SNQPSEAPKQDYIHVRARRGQATDSHSLAERARREKISERMNILQDLVPGCNKVIGKASV 176
Query: 395 LDEIINYVQSLQRQVEFLSMKLASVNTRLELNVDALMSKDI 435
LDEIINY+Q+LQRQVEFLSMKL +VN+++ ++ KD
Sbjct: 177 LDEIINYIQALQRQVEFLSMKLEAVNSQMNPGIEGFPPKDF 217
>gi|224133354|ref|XP_002321546.1| predicted protein [Populus trichocarpa]
gi|222868542|gb|EEF05673.1| predicted protein [Populus trichocarpa]
Length = 213
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 90/161 (55%), Positives = 106/161 (65%), Gaps = 33/161 (20%)
Query: 264 NDFNSRKRKAVSKGKGKETAASPSVNNTTKVAEANASESSKNKRCKPNEGKANGNGAVKA 323
ND N S GK ++ + S S NN ++ AE AS ++ NK +
Sbjct: 30 NDLND------SNGKRRKISGSRSENNDSR-AETEASSAANNKTAE-------------- 68
Query: 324 EDEGDDKQAKANNAKPPEPPK-DYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLV 382
++KP EPPK DYIHVRARRGQATDSHSLAER RREKISERM +LQDLV
Sbjct: 69 -----------QSSKPSEPPKQDYIHVRARRGQATDSHSLAERARREKISERMNMLQDLV 117
Query: 383 PGCNKVTGKALMLDEIINYVQSLQRQVEFLSMKLASVNTRL 423
PGCNKV GKAL+LDEIINY+QSLQ QVEFLSMKL +VN+R+
Sbjct: 118 PGCNKVIGKALVLDEIINYIQSLQCQVEFLSMKLEAVNSRM 158
>gi|115477012|ref|NP_001062102.1| Os08g0487700 [Oryza sativa Japonica Group]
gi|42408258|dbj|BAD09414.1| bHLH transcription factor-like [Oryza sativa Japonica Group]
gi|113624071|dbj|BAF24016.1| Os08g0487700 [Oryza sativa Japonica Group]
gi|125561978|gb|EAZ07426.1| hypothetical protein OsI_29678 [Oryza sativa Indica Group]
gi|125603820|gb|EAZ43145.1| hypothetical protein OsJ_27735 [Oryza sativa Japonica Group]
Length = 365
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 82/126 (65%), Positives = 100/126 (79%), Gaps = 12/126 (9%)
Query: 346 YIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSL 405
Y HVRAR+GQAT++HSLAER+RREKISERMKLLQDLVPGC+KVTGKALMLDEIINYVQSL
Sbjct: 173 YSHVRARKGQATNNHSLAERLRREKISERMKLLQDLVPGCSKVTGKALMLDEIINYVQSL 232
Query: 406 QRQVEFLSMKLASVNTRLELNVDALM--SKDIYQ-PNKPLPHSIFQIDSSASAFFSHQPQ 462
QRQVEFLSMKL++VN R++L++++L+ SKD+ + P +P SSA FS +
Sbjct: 233 QRQVEFLSMKLSAVNPRIDLDIESLVNNSKDVLRFPGQP---------SSAPMGFSFSTE 283
Query: 463 QNPALH 468
P L
Sbjct: 284 MMPGLQ 289
>gi|225430730|ref|XP_002266502.1| PREDICTED: transcription factor bHLH64-like [Vitis vinifera]
Length = 362
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 86/163 (52%), Positives = 109/163 (66%), Gaps = 7/163 (4%)
Query: 273 AVSKGKGKETAASPSVNNTTKVAEANASESSKNKRCKPNEGKANGNGAVKAEDEGDDKQA 332
A + G+E A SV + AE +E K+++ K +E + K + +
Sbjct: 121 AATSVDGRELAGRNSVKK--RKAEVALTEECKDQKIKRDEEEEESKIEEKHSEISPNASK 178
Query: 333 KANNAKPPEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKA 392
+ + KP DYIHVRARRGQATDSHSLAER RREKIS++MK LQDLVPGCNK+TGKA
Sbjct: 179 VSGSPKP-----DYIHVRARRGQATDSHSLAERARREKISKKMKYLQDLVPGCNKITGKA 233
Query: 393 LMLDEIINYVQSLQRQVEFLSMKLASVNTRLELNVDALMSKDI 435
MLDEIINYVQSLQRQVEFLS+KLA++N R + N+D + K+
Sbjct: 234 GMLDEIINYVQSLQRQVEFLSLKLATMNPRTDFNLDTFLGKEF 276
>gi|297851058|ref|XP_002893410.1| DNA binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297339252|gb|EFH69669.1| DNA binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 347
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 73/96 (76%), Positives = 87/96 (90%)
Query: 346 YIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSL 405
YIH+RARRGQAT+SHSLAERVRREKISERMK LQDLVPGC+KVTGKA+MLDEIINYVQSL
Sbjct: 165 YIHMRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCDKVTGKAVMLDEIINYVQSL 224
Query: 406 QRQVEFLSMKLASVNTRLELNVDALMSKDIYQPNKP 441
Q Q+EFLSMKL++VN L+ N+++L++KD Q + P
Sbjct: 225 QCQIEFLSMKLSAVNPVLDFNLESLLAKDALQSSAP 260
>gi|15241896|ref|NP_201067.1| transcription factor bHLH79 [Arabidopsis thaliana]
gi|75311612|sp|Q9LV17.1|BH079_ARATH RecName: Full=Transcription factor bHLH79; AltName: Full=Basic
helix-loop-helix protein 79; Short=AtbHLH79; Short=bHLH
79; AltName: Full=Transcription factor EN 81; AltName:
Full=bHLH transcription factor bHLH079
gi|8809657|dbj|BAA97208.1| unnamed protein product [Arabidopsis thaliana]
gi|18175779|gb|AAL59926.1| unknown protein [Arabidopsis thaliana]
gi|21536811|gb|AAM61143.1| unknown [Arabidopsis thaliana]
gi|21689825|gb|AAM67556.1| unknown protein [Arabidopsis thaliana]
gi|332010247|gb|AED97630.1| transcription factor bHLH79 [Arabidopsis thaliana]
Length = 281
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 82/129 (63%), Positives = 94/129 (72%), Gaps = 5/129 (3%)
Query: 296 EANASESSKNKRCKPNEGKANGNGAVKAEDE--GDDKQAKANNAK-PPEPPKDYIHVRAR 352
E S K K C G NG+G+++ E E +KA K PEPPKDYIHVRAR
Sbjct: 99 ELKESGDKKRKLCGSESG--NGDGSMRPEGETSSGGGGSKATEQKNKPEPPKDYIHVRAR 156
Query: 353 RGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFL 412
RGQATD HSLAER RREKISE+M LQD++PGCNK+ GKAL+LDEIINY+QSLQRQVEFL
Sbjct: 157 RGQATDRHSLAERARREKISEKMTALQDIIPGCNKIIGKALVLDEIINYIQSLQRQVEFL 216
Query: 413 SMKLASVNT 421
SMKL VN+
Sbjct: 217 SMKLEVVNS 225
>gi|3096922|emb|CAA18832.1| putative protein [Arabidopsis thaliana]
gi|7270403|emb|CAB80170.1| putative protein [Arabidopsis thaliana]
Length = 324
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 72/91 (79%), Positives = 83/91 (91%)
Query: 345 DYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQS 404
DYIHVRARRGQATDSHS+AERVRREKISERMK LQDLVPGC+K+TGKA MLDEIINYVQS
Sbjct: 168 DYIHVRARRGQATDSHSIAERVRREKISERMKFLQDLVPGCDKITGKAGMLDEIINYVQS 227
Query: 405 LQRQVEFLSMKLASVNTRLELNVDALMSKDI 435
LQRQ+EFLSMKLA VN R + ++D + +K++
Sbjct: 228 LQRQIEFLSMKLAIVNPRPDFDMDDIFAKEV 258
>gi|21539493|gb|AAM53299.1| unknown protein [Arabidopsis thaliana]
Length = 335
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 72/91 (79%), Positives = 83/91 (91%)
Query: 345 DYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQS 404
DYIHVRARRGQATDSHS+AERVRREKISERMK LQDLVPGC+K+TGKA MLDEIINYVQS
Sbjct: 168 DYIHVRARRGQATDSHSIAERVRREKISERMKFLQDLVPGCDKITGKAGMLDEIINYVQS 227
Query: 405 LQRQVEFLSMKLASVNTRLELNVDALMSKDI 435
LQRQ+EFLSMKLA VN R + ++D + +K++
Sbjct: 228 LQRQIEFLSMKLAIVNPRPDFDMDDIFAKEV 258
>gi|388503848|gb|AFK39990.1| unknown [Lotus japonicus]
Length = 248
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 85/145 (58%), Positives = 105/145 (72%), Gaps = 14/145 (9%)
Query: 303 SKNKRCKPNEGKA---NGNGAVKAE-------DEGDDKQAKANNAKPPEPPKDYIHVRAR 352
S NKR + G + NG G AE + D++ K + ++PP+ +DYIHVRAR
Sbjct: 65 SGNKRIRLGGGGSTVENGGGLKAAEASSVAGSNNSDEQSTKPSESEPPK--QDYIHVRAR 122
Query: 353 RGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFL 412
RGQATDSHS+AER RREKISERMK+LQDLVPGCNK+ GKAL+LDEIINY+QSLQ QVEFL
Sbjct: 123 RGQATDSHSIAERARREKISERMKILQDLVPGCNKMIGKALVLDEIINYIQSLQHQVEFL 182
Query: 413 SMKLASVNTRLELNV--DALMSKDI 435
SMKL +VN+R +N + SKD+
Sbjct: 183 SMKLEAVNSRANMNPTNEGFPSKDV 207
>gi|20127066|gb|AAM10952.1|AF488596_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 335
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 72/91 (79%), Positives = 83/91 (91%)
Query: 345 DYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQS 404
DYIHVRARRGQATDSHS+AERVRREKISERMK LQDLVPGC+K+TGKA MLDEIINYVQS
Sbjct: 168 DYIHVRARRGQATDSHSIAERVRREKISERMKFLQDLVPGCDKITGKAGMLDEIINYVQS 227
Query: 405 LQRQVEFLSMKLASVNTRLELNVDALMSKDI 435
LQRQ+EFLSMKLA VN R + ++D + +K++
Sbjct: 228 LQRQIEFLSMKLAIVNPRPDFDMDDIFAKEV 258
>gi|22329164|ref|NP_195179.2| transcription factor bHLH63 [Arabidopsis thaliana]
gi|75299602|sp|Q8GY61.1|BH063_ARATH RecName: Full=Transcription factor bHLH63; AltName: Full=Basic
helix-loop-helix protein 63; Short=AtbHLH63; Short=bHLH
63; AltName: Full=Transcription factor EN 84; AltName:
Full=bHLH transcription factor bHLH063
gi|26450757|dbj|BAC42487.1| putative bHLH transcription factor bHLH063 [Arabidopsis thaliana]
gi|28950907|gb|AAO63377.1| At4g34530 [Arabidopsis thaliana]
gi|332660989|gb|AEE86389.1| transcription factor bHLH63 [Arabidopsis thaliana]
Length = 335
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 72/91 (79%), Positives = 83/91 (91%)
Query: 345 DYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQS 404
DYIHVRARRGQATDSHS+AERVRREKISERMK LQDLVPGC+K+TGKA MLDEIINYVQS
Sbjct: 168 DYIHVRARRGQATDSHSIAERVRREKISERMKFLQDLVPGCDKITGKAGMLDEIINYVQS 227
Query: 405 LQRQVEFLSMKLASVNTRLELNVDALMSKDI 435
LQRQ+EFLSMKLA VN R + ++D + +K++
Sbjct: 228 LQRQIEFLSMKLAIVNPRPDFDMDDIFAKEV 258
>gi|356516503|ref|XP_003526933.1| PREDICTED: transcription factor bHLH77-like [Glycine max]
Length = 320
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 78/98 (79%), Positives = 84/98 (85%), Gaps = 3/98 (3%)
Query: 339 PPEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEI 398
P EPP YIHVRARRGQATDSHSLAERVRREKISERMK+LQ LVPGC+KVTGKALMLDEI
Sbjct: 154 PEEPPTGYIHVRARRGQATDSHSLAERVRREKISERMKVLQRLVPGCDKVTGKALMLDEI 213
Query: 399 INYVQSLQRQVEFLSMKLASVN---TRLELNVDALMSK 433
INYVQSLQ QVEFLSMKLASVN L ++D L+ +
Sbjct: 214 INYVQSLQNQVEFLSMKLASVNPMFYDLATDLDTLLVR 251
>gi|388498252|gb|AFK37192.1| unknown [Lotus japonicus]
Length = 220
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 86/132 (65%), Positives = 97/132 (73%), Gaps = 5/132 (3%)
Query: 345 DYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQS 404
DYIHVRARRGQATDSHSLAER RREKISERMK+LQDLVPGCNKV GKAL+LDEIINY+QS
Sbjct: 87 DYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQS 146
Query: 405 LQRQVEFLSMKLASVNTRLELN--VDALMSKDIYQPNKPLPHSIFQIDSSASAFFSHQPQ 462
LQ QVEFLSMKL +VN+R +N +D SKD+ L IF S AS ++ Q
Sbjct: 147 LQHQVEFLSMKLEAVNSRFNMNPTIDCFSSKDVGTQPFDLAGIIF--GSQASRGYA-QGS 203
Query: 463 QNPALHGNISNG 474
Q LH I+ G
Sbjct: 204 QPGWLHMQITGG 215
>gi|297797231|ref|XP_002866500.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297312335|gb|EFH42759.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 282
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 83/130 (63%), Positives = 95/130 (73%), Gaps = 6/130 (4%)
Query: 296 EANASESSKNKRCKPNEGKANGNGAVKAEDE---GDDKQAKANNAK-PPEPPKDYIHVRA 351
E S K K C G NG+G+++ E E G +KA K PEPPKDYIHVRA
Sbjct: 99 ELKESGDKKRKLCGSESG--NGDGSMRPEGETSSGGGGGSKATEQKNKPEPPKDYIHVRA 156
Query: 352 RRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEF 411
RRGQATD HSLAER RREKISE+M LQD++PGCNK+ GKAL+LDEIINY+QSLQRQVEF
Sbjct: 157 RRGQATDRHSLAERARREKISEKMTALQDIIPGCNKIIGKALVLDEIINYIQSLQRQVEF 216
Query: 412 LSMKLASVNT 421
LSMKL VN+
Sbjct: 217 LSMKLEVVNS 226
>gi|356507384|ref|XP_003522447.1| PREDICTED: transcription factor bHLH137-like [Glycine max]
Length = 334
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 78/98 (79%), Positives = 84/98 (85%), Gaps = 3/98 (3%)
Query: 339 PPEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEI 398
P EPP YIHVRARRGQATDSHSLAERVRREKISERMK+LQ LVPGC+KVTGKALMLDEI
Sbjct: 137 PEEPPTGYIHVRARRGQATDSHSLAERVRREKISERMKVLQRLVPGCDKVTGKALMLDEI 196
Query: 399 INYVQSLQRQVEFLSMKLASVN---TRLELNVDALMSK 433
INYVQSLQ QVEFLSMKLASVN L ++D L+ +
Sbjct: 197 INYVQSLQNQVEFLSMKLASVNPMFYDLATDLDTLLVR 234
>gi|297802298|ref|XP_002869033.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297314869|gb|EFH45292.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 304
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 100/190 (52%), Positives = 121/190 (63%), Gaps = 16/190 (8%)
Query: 298 NASESSKNKRCKPNEGKANG--NGAVKAEDEGDD----KQAKANNAKPPEPPK-DYIHVR 350
N + S +NKR KP EGK +KAEDE + K +N E K DYIHVR
Sbjct: 85 NRAISLQNKR-KP-EGKTEKREKKKIKAEDETESSMKGKTNMSNTETSSEIQKPDYIHVR 142
Query: 351 ARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVE 410
ARRG+ATD HSLAER RREKIS++MK LQD+VPGCNKVTGKA MLDEIINYVQSLQ+QVE
Sbjct: 143 ARRGEATDRHSLAERARREKISKKMKCLQDIVPGCNKVTGKAGMLDEIINYVQSLQQQVE 202
Query: 411 FLSMKLASVNTRLELNVDALMSKDIYQPNKPLPHSIFQIDSSASA---FFSHQPQQNPAL 467
FLSMKL+ +N LE ++D L +K LP + DS S F S Q ++
Sbjct: 203 FLSMKLSVINPELECHIDDLSAKQFQAYFTGLPEA----DSKQSIMADFRSFPLHQQGSI 258
Query: 468 HGNISNGTMT 477
++ NGT+T
Sbjct: 259 DYSVLNGTVT 268
>gi|297802514|ref|XP_002869141.1| hypothetical protein ARALYDRAFT_491205 [Arabidopsis lyrata subsp.
lyrata]
gi|297314977|gb|EFH45400.1| hypothetical protein ARALYDRAFT_491205 [Arabidopsis lyrata subsp.
lyrata]
Length = 333
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 72/91 (79%), Positives = 82/91 (90%)
Query: 345 DYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQS 404
DYIHVRARRGQATDSHS+AERVRREKISERMK LQDLVPGC+K+TGKA MLDEIINYVQS
Sbjct: 165 DYIHVRARRGQATDSHSIAERVRREKISERMKFLQDLVPGCDKITGKAGMLDEIINYVQS 224
Query: 405 LQRQVEFLSMKLASVNTRLELNVDALMSKDI 435
LQRQ+EFLSMKLA VN R + ++D + K++
Sbjct: 225 LQRQIEFLSMKLAVVNPRPDFDMDDIFDKEV 255
>gi|255648089|gb|ACU24499.1| unknown [Glycine max]
Length = 229
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 88/149 (59%), Positives = 107/149 (71%), Gaps = 13/149 (8%)
Query: 299 ASESSKNKRCKPN-EGKANGNGAVKAEDEGDDKQAKAN-----NAKP---PEPPK-DYIH 348
+++ NK K + G + NGA+KA E D N AKP +PPK DYIH
Sbjct: 41 STDCGSNKHIKSSGSGSQDQNGALKA-GEVDATSVAGNKLPEQTAKPSSSEQPPKQDYIH 99
Query: 349 VRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQ 408
VRARRGQATDSHSLAER RREKISERMK+LQD+VPGCNKV GKAL+LDEIINY+QSLQ Q
Sbjct: 100 VRARRGQATDSHSLAERARREKISERMKILQDIVPGCNKVIGKALVLDEIINYIQSLQHQ 159
Query: 409 VEFLSMKLASVNTRLELN--VDALMSKDI 435
VEFL MKL +VN+RL ++ ++ SK++
Sbjct: 160 VEFLFMKLEAVNSRLSMSPIIECFPSKEV 188
>gi|357486401|ref|XP_003613488.1| BHLH transcription factor [Medicago truncatula]
gi|355514823|gb|AES96446.1| BHLH transcription factor [Medicago truncatula]
Length = 239
Score = 158 bits (400), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 90/163 (55%), Positives = 103/163 (63%), Gaps = 25/163 (15%)
Query: 313 GKANGNGAVKAEDEGDDKQAK-ANNAK---------------PPEPPKDYIHVRARRGQA 356
G A GN +D GD K++K + N+K P P KDYIHVRARRGQA
Sbjct: 60 GGARGNSNAVNDDGGDGKRSKTSGNSKGEENSSGKHAEETSDEPHPKKDYIHVRARRGQA 119
Query: 357 TDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMKL 416
TDSHSLAER RREKISERMK LQDLVPGCNKV GKAL+LDEIINY+QSL QVEFLSMKL
Sbjct: 120 TDSHSLAERARREKISERMKTLQDLVPGCNKVIGKALVLDEIINYIQSLHHQVEFLSMKL 179
Query: 417 ASVNTRLELNVDALMSKDIYQPNKPLPHSIFQIDSSASAFFSH 459
+VN+R ++ P K F D++A F SH
Sbjct: 180 EAVNSRPTPGMEVF-------PPKTFDQQTF--DTTAIPFASH 213
>gi|357115005|ref|XP_003559284.1| PREDICTED: transcription factor bHLH79-like [Brachypodium
distachyon]
Length = 243
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 84/140 (60%), Positives = 101/140 (72%), Gaps = 5/140 (3%)
Query: 303 SKNKRCKPNEGKANGNGAVKAEDEGDD----KQAKANNAKPPEPPKDYIHVRARRGQATD 358
S+ KR + N+ ++ NG+ + + EGD K N P P +DYIHVRARRGQATD
Sbjct: 65 SEAKRFRANK-SSDDNGSFRTDAEGDSRNGSKVVDQNPPPPEPPKQDYIHVRARRGQATD 123
Query: 359 SHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMKLAS 418
SHSLAER RREKI+ERMK+LQDLVPGCNKV GKA +LDEIINYVQ+L+RQVEFLSMKL +
Sbjct: 124 SHSLAERARREKITERMKILQDLVPGCNKVIGKASVLDEIINYVQALERQVEFLSMKLEA 183
Query: 419 VNTRLELNVDALMSKDIYQP 438
VN + V+ SKD P
Sbjct: 184 VNAHVNNGVETFPSKDFSAP 203
>gi|224134264|ref|XP_002327796.1| predicted protein [Populus trichocarpa]
gi|222836881|gb|EEE75274.1| predicted protein [Populus trichocarpa]
Length = 290
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 75/104 (72%), Positives = 85/104 (81%)
Query: 332 AKANNAKPPEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGK 391
+K N P DYIHVRARRGQATDSHSLAER RREKIS++MK LQDLVPGCNK+TG+
Sbjct: 185 SKENQQTSALPKTDYIHVRARRGQATDSHSLAERARREKISKKMKSLQDLVPGCNKITGR 244
Query: 392 ALMLDEIINYVQSLQRQVEFLSMKLASVNTRLELNVDALMSKDI 435
A MLDEIINYVQSLQRQVEFLSMKLA++N R E N+D K++
Sbjct: 245 AGMLDEIINYVQSLQRQVEFLSMKLAALNPRPEFNIDNFSGKEV 288
>gi|302774124|ref|XP_002970479.1| hypothetical protein SELMODRAFT_93546 [Selaginella moellendorffii]
gi|302793582|ref|XP_002978556.1| hypothetical protein SELMODRAFT_108937 [Selaginella moellendorffii]
gi|300153905|gb|EFJ20542.1| hypothetical protein SELMODRAFT_108937 [Selaginella moellendorffii]
gi|300161995|gb|EFJ28609.1| hypothetical protein SELMODRAFT_93546 [Selaginella moellendorffii]
Length = 125
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 80/107 (74%), Positives = 85/107 (79%), Gaps = 9/107 (8%)
Query: 336 NAKPPEP-PKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALM 394
N+KP +DYIHVRARRGQATDSHSLAERVRREKISERMK LQDLVPGC+KVTGKA+M
Sbjct: 19 NSKPGAGNTQDYIHVRARRGQATDSHSLAERVRREKISERMKTLQDLVPGCSKVTGKAMM 78
Query: 395 LDEIINYVQSLQRQVEFLSMKLASVNTRLELNVDALMSKDIYQPNKP 441
LDEIINYVQSLQRQVEFLSMKLA+V L D YQ KP
Sbjct: 79 LDEIINYVQSLQRQVEFLSMKLAAVKPAL--------YTDAYQVRKP 117
>gi|295913405|gb|ADG57955.1| transcription factor [Lycoris longituba]
Length = 186
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 75/101 (74%), Positives = 84/101 (83%), Gaps = 1/101 (0%)
Query: 336 NAKPPEPPK-DYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALM 394
N +P E PK DYIHVRARRGQATDSHSLAER RREKISERMK+LQDLVPGCNKV GKA +
Sbjct: 45 NTQPLEAPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKASV 104
Query: 395 LDEIINYVQSLQRQVEFLSMKLASVNTRLELNVDALMSKDI 435
LDEIINY+Q+LQRQVEFLSMKL +VN+R ++ KD
Sbjct: 105 LDEIINYIQALQRQVEFLSMKLEAVNSRTNSGIEGFPPKDF 145
>gi|357520555|ref|XP_003630566.1| BHLH transcription factor [Medicago truncatula]
gi|355524588|gb|AET05042.1| BHLH transcription factor [Medicago truncatula]
Length = 327
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 78/114 (68%), Positives = 89/114 (78%), Gaps = 10/114 (8%)
Query: 341 EPPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIIN 400
E P YIHVRARRGQATDSHSLAERVRREKISERMK+LQ LVPGC++VTGKAL+LDEIIN
Sbjct: 137 EVPTGYIHVRARRGQATDSHSLAERVRREKISERMKILQQLVPGCDRVTGKALVLDEIIN 196
Query: 401 YVQSLQRQVEFLSMKLASVN---TRLELNVDALMSK-------DIYQPNKPLPH 444
YVQSLQ QVEFLSMKLASVN +++D L+ + I P+ P+PH
Sbjct: 197 YVQSLQNQVEFLSMKLASVNPIFFDFAMDLDTLLVRPDHQRLNSITSPSTPIPH 250
>gi|297819388|ref|XP_002877577.1| hypothetical protein ARALYDRAFT_347878 [Arabidopsis lyrata subsp.
lyrata]
gi|297323415|gb|EFH53836.1| hypothetical protein ARALYDRAFT_347878 [Arabidopsis lyrata subsp.
lyrata]
Length = 260
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 89/168 (52%), Positives = 111/168 (66%), Gaps = 10/168 (5%)
Query: 254 EESSVSEQVPNDFNSRKRKAVSKGKGKETAASPSVNNTTKVAEANASESSKNKRCKPNEG 313
EES+V+EQ RKR+A++ ++ ++ ++ T V S K K C +EG
Sbjct: 55 EESTVTEQTGG---GRKRRALTS---QDESSKMMFSSCTSVNRLKESSKKKMKVC-LSEG 107
Query: 314 KANGNGAVKAEDEGDDKQAKANNAKPPEPPKDYIHVRARRGQATDSHSLAERVRREKISE 373
+ +G + + +K K P KDYIHVRARRGQATD HSLAER RREKISE
Sbjct: 108 ETE-DGLRREGETSSGGGSKETEEKSP--LKDYIHVRARRGQATDRHSLAERARREKISE 164
Query: 374 RMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMKLASVNT 421
RMK LQDL+PGCNK+ GKAL+LDEIINY+QSLQRQVEFLSMKL VN+
Sbjct: 165 RMKFLQDLIPGCNKIIGKALVLDEIINYIQSLQRQVEFLSMKLEIVNS 212
>gi|224136304|ref|XP_002322296.1| predicted protein [Populus trichocarpa]
gi|222869292|gb|EEF06423.1| predicted protein [Populus trichocarpa]
Length = 357
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 76/96 (79%), Positives = 83/96 (86%), Gaps = 3/96 (3%)
Query: 341 EPPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIIN 400
EPP YIHVRARRGQATDSHSLAERVRRE+ISERMK+LQ LVPGC+K+TGKALMLDEIIN
Sbjct: 166 EPPAGYIHVRARRGQATDSHSLAERVRRERISERMKILQLLVPGCDKITGKALMLDEIIN 225
Query: 401 YVQSLQRQVEFLSMKLASVNTRLE---LNVDALMSK 433
YVQSLQ QVEFLSMKLASVN L ++ DA M +
Sbjct: 226 YVQSLQNQVEFLSMKLASVNPLLYDFGMDRDAFMVR 261
>gi|357141712|ref|XP_003572320.1| PREDICTED: transcription factor bHLH49-like [Brachypodium
distachyon]
Length = 327
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 70/90 (77%), Positives = 85/90 (94%)
Query: 346 YIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSL 405
Y+HVRAR QAT+SHS+AE++RREKISERMKLLQDLVPGC+KVTGKA+MLDEIINYVQSL
Sbjct: 145 YVHVRARSEQATNSHSIAEKLRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSL 204
Query: 406 QRQVEFLSMKLASVNTRLELNVDALMSKDI 435
QRQVEFLSMKL++VN RL ++++ L++KDI
Sbjct: 205 QRQVEFLSMKLSTVNPRLGVDIELLLAKDI 234
>gi|30690689|ref|NP_849508.1| transcription factor BEE 2 [Arabidopsis thaliana]
gi|332661270|gb|AEE86670.1| transcription factor BEE 2 [Arabidopsis thaliana]
Length = 302
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 93/164 (56%), Positives = 109/164 (66%), Gaps = 9/164 (5%)
Query: 304 KNKRCKPNEGKANG--NGAVKAEDEGD----DKQAKANNAKPPEPPK-DYIHVRARRGQA 356
+NKR KP EGK +KAEDE + K +N E K DYIHVRARRG+A
Sbjct: 91 QNKR-KP-EGKTEKREKKKIKAEDETEPSMKGKSNMSNTETSSEIQKPDYIHVRARRGEA 148
Query: 357 TDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMKL 416
TD HSLAER RREKIS++MK LQD+VPGCNKVTGKA MLDEIINYVQSLQ+QVEFLSMKL
Sbjct: 149 TDRHSLAERARREKISKKMKCLQDIVPGCNKVTGKAGMLDEIINYVQSLQQQVEFLSMKL 208
Query: 417 ASVNTRLELNVDALMSKDIYQPNKPLPHSIFQIDSSASAFFSHQ 460
+ +N LE ++D L +K Y P S I + +F HQ
Sbjct: 209 SVINPELECHIDDLSAKQAYFTGPPEGDSKQSIMADFRSFPLHQ 252
>gi|413920794|gb|AFW60726.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 328
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 91/160 (56%), Positives = 107/160 (66%), Gaps = 13/160 (8%)
Query: 265 DFNSRKRKAVSKGKGKETAASPSVNNTTKVAEANASESSKNKRCKPNEGK----ANGNGA 320
D RKRKA S K++ A +V TT E+ + ++ K+CK + + A G G
Sbjct: 177 DGPCRKRKA-SGTSSKQSKAKEAV--TTAPPESRETAETRAKKCKLSTDEERKPAAGEGW 233
Query: 321 VKAEDEGDDKQAKANNAKPPEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQD 380
G K+ A +A EPPKDYIHVRARRGQATDSHSLAERVRREKI ERMKLLQD
Sbjct: 234 ---RGSGKGKELVAADA---EPPKDYIHVRARRGQATDSHSLAERVRREKIGERMKLLQD 287
Query: 381 LVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMKLASVN 420
LVPGC+KVTGKA+MLDEIINYVQSLQRQVE + L +
Sbjct: 288 LVPGCSKVTGKAVMLDEIINYVQSLQRQVEVRRVCLLCIG 327
>gi|115456009|ref|NP_001051605.1| Os03g0802900 [Oryza sativa Japonica Group]
gi|29150361|gb|AAO72370.1| hypothetical protein [Oryza sativa Japonica Group]
gi|108711612|gb|ABF99407.1| bHLH transcription factor, putative, expressed [Oryza sativa
Japonica Group]
gi|113550076|dbj|BAF13519.1| Os03g0802900 [Oryza sativa Japonica Group]
Length = 265
Score = 155 bits (391), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 82/137 (59%), Positives = 99/137 (72%), Gaps = 5/137 (3%)
Query: 303 SKNKRCKPNEGKANGNGAVKAEDEGDDKQAKA----NNAKPPEPPKDYIHVRARRGQATD 358
S+ KR K ++ + N +++ E E D + A N P P +DYIHVRARRGQATD
Sbjct: 87 SEAKRFKASKSSGD-NSSLRTEAETDSRNASKSGDQNPPPPEPPKQDYIHVRARRGQATD 145
Query: 359 SHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMKLAS 418
SHSLAER RREKISERMK+LQDLVPGCNKV GKA +LDEIINY+Q+LQRQVEFLSMKL +
Sbjct: 146 SHSLAERARREKISERMKILQDLVPGCNKVIGKASVLDEIINYIQALQRQVEFLSMKLEA 205
Query: 419 VNTRLELNVDALMSKDI 435
VN + ++A KD
Sbjct: 206 VNAHVNNGIEAFPPKDF 222
>gi|323388909|gb|ADX60259.1| bHLH transcription factor [Oryza sativa Japonica Group]
Length = 265
Score = 155 bits (391), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 82/137 (59%), Positives = 99/137 (72%), Gaps = 5/137 (3%)
Query: 303 SKNKRCKPNEGKANGNGAVKAEDEGDDKQAKA----NNAKPPEPPKDYIHVRARRGQATD 358
S+ KR K ++ + N +++ E E D + A N P P +DYIHVRARRGQATD
Sbjct: 87 SEAKRFKASKSSGD-NSSLRTEAETDSRNASKSGDQNPPPPEPPKQDYIHVRARRGQATD 145
Query: 359 SHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMKLAS 418
SHSLAER RREKISERMK+LQDLVPGCNKV GKA +LDEIINY+Q+LQRQVEFLSMKL +
Sbjct: 146 SHSLAERARREKISERMKILQDLVPGCNKVIGKASVLDEIINYIQALQRQVEFLSMKLEA 205
Query: 419 VNTRLELNVDALMSKDI 435
VN + ++A KD
Sbjct: 206 VNAHVNNGIEAFPPKDF 222
>gi|224100187|ref|XP_002311780.1| predicted protein [Populus trichocarpa]
gi|222851600|gb|EEE89147.1| predicted protein [Populus trichocarpa]
Length = 268
Score = 155 bits (391), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 73/93 (78%), Positives = 80/93 (86%)
Query: 345 DYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQS 404
DYIHVRARRGQATDSHSLAER RREKISERMK+LQD+VPGCNKVTGKAL+LDEIINY+QS
Sbjct: 137 DYIHVRARRGQATDSHSLAERARREKISERMKILQDIVPGCNKVTGKALVLDEIINYIQS 196
Query: 405 LQRQVEFLSMKLASVNTRLELNVDALMSKDIYQ 437
LQRQVEFLSMKL +VN + + SKD Q
Sbjct: 197 LQRQVEFLSMKLEAVNLNMNPETEVFPSKDFGQ 229
>gi|363808192|ref|NP_001242485.1| uncharacterized protein LOC100809878 [Glycine max]
gi|255644791|gb|ACU22897.1| unknown [Glycine max]
Length = 224
Score = 155 bits (391), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 88/163 (53%), Positives = 112/163 (68%), Gaps = 15/163 (9%)
Query: 286 PSVNNTTKVAEANASESSKNKRCKPNEGKA-NGNGAVKAEDEGDDKQAKANNAKPPEPPK 344
PS + K + +S+S+ NK K + ++ + NGA+K + D + A N P + PK
Sbjct: 27 PSDHTPRKRRLSPSSDSASNKHIKLSAPESQDQNGALKVGEV--DATSVAGNKLPQQTPK 84
Query: 345 ----------DYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALM 394
DYIHVRARRGQATD+HSLAER RREKISERMK+LQDLVPGCNKV GKA +
Sbjct: 85 PSSSEQAPKQDYIHVRARRGQATDNHSLAERARREKISERMKILQDLVPGCNKVIGKAFV 144
Query: 395 LDEIINYVQSLQRQVEFLSMKLASVNTRLEL--NVDALMSKDI 435
LD IINYVQSLQRQVEFLSMKL +V++RL + ++ SK++
Sbjct: 145 LDGIINYVQSLQRQVEFLSMKLEAVSSRLSMKPTLECFPSKEV 187
>gi|125588289|gb|EAZ28953.1| hypothetical protein OsJ_12999 [Oryza sativa Japonica Group]
Length = 224
Score = 154 bits (390), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 82/137 (59%), Positives = 99/137 (72%), Gaps = 5/137 (3%)
Query: 303 SKNKRCKPNEGKANGNGAVKAEDEGDDKQAKA----NNAKPPEPPKDYIHVRARRGQATD 358
S+ KR K ++ + N +++ E E D + A N P P +DYIHVRARRGQATD
Sbjct: 46 SEAKRFKASKSSGD-NSSLRTEAETDSRNASKSGDQNPPPPEPPKQDYIHVRARRGQATD 104
Query: 359 SHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMKLAS 418
SHSLAER RREKISERMK+LQDLVPGCNKV GKA +LDEIINY+Q+LQRQVEFLSMKL +
Sbjct: 105 SHSLAERARREKISERMKILQDLVPGCNKVIGKASVLDEIINYIQALQRQVEFLSMKLEA 164
Query: 419 VNTRLELNVDALMSKDI 435
VN + ++A KD
Sbjct: 165 VNAHVNNGIEAFPPKDF 181
>gi|102139897|gb|ABF70046.1| basic helix-loop-helix (bHLH) family protein [Musa acuminata]
Length = 278
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 85/148 (57%), Positives = 103/148 (69%), Gaps = 8/148 (5%)
Query: 279 GKETAASPSVNNTTKVAEANASESSKNKRCKPNEGKANGNGAVKAEDEGDDKQAKANNAK 338
G+E A++ S N+T+ +A S+ EG A G K + K+A ++A
Sbjct: 70 GQENASANSFENSTEKRKAPKSKQESRSSGAEEEGTARGGATSK-----NKKKASGSDA- 123
Query: 339 PPEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEI 398
P E DYIHVRARRGQATDSHSLAERVRRE+ISERMK LQ+LVPGC+K+ GKA LDEI
Sbjct: 124 PKE--TDYIHVRARRGQATDSHSLAERVRRERISERMKYLQELVPGCSKIMGKASTLDEI 181
Query: 399 INYVQSLQRQVEFLSMKLASVNTRLELN 426
INYVQSLQRQVEFLSMKLA+ R+ L+
Sbjct: 182 INYVQSLQRQVEFLSMKLAAAEPRMHLS 209
>gi|4006909|emb|CAB16839.1| putative protein [Arabidopsis thaliana]
gi|7270602|emb|CAB80320.1| putative protein [Arabidopsis thaliana]
Length = 300
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 86/137 (62%), Positives = 100/137 (72%), Gaps = 9/137 (6%)
Query: 304 KNKRCKPNEGKANG--NGAVKAEDEGD----DKQAKANNAKPPEPPK-DYIHVRARRGQA 356
+NKR KP EGK +KAEDE + K +N E K DYIHVRARRG+A
Sbjct: 87 QNKR-KP-EGKTEKREKKKIKAEDETEPSMKGKSNMSNTETSSEIQKPDYIHVRARRGEA 144
Query: 357 TDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMKL 416
TD HSLAER RREKIS++MK LQD+VPGCNKVTGKA MLDEIINYVQSLQ+QVEFLSMKL
Sbjct: 145 TDRHSLAERARREKISKKMKCLQDIVPGCNKVTGKAGMLDEIINYVQSLQQQVEFLSMKL 204
Query: 417 ASVNTRLELNVDALMSK 433
+ +N LE ++D L +K
Sbjct: 205 SVINPELECHIDDLSAK 221
>gi|312283223|dbj|BAJ34477.1| unnamed protein product [Thellungiella halophila]
Length = 342
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 77/100 (77%), Positives = 82/100 (82%), Gaps = 2/100 (2%)
Query: 345 DYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQS 404
DYIHVRARRGQATD HSLAER RREKIS++MK LQDLVPGCNKVTGKA MLDEIINYVQS
Sbjct: 183 DYIHVRARRGQATDRHSLAERARREKISKKMKYLQDLVPGCNKVTGKAGMLDEIINYVQS 242
Query: 405 LQRQVEFLSMKLASVNTRLELNVDALMSKDI--YQPNKPL 442
LQRQVEFLSMKLA +N LEL V+ L K Y N P+
Sbjct: 243 LQRQVEFLSMKLAVLNPELELAVEDLSVKQFQAYFTNLPV 282
>gi|18398703|ref|NP_565434.1| transcription factor bHLH64 [Arabidopsis thaliana]
gi|15724318|gb|AAL06552.1|AF412099_1 At2g18300/T30D6.19 [Arabidopsis thaliana]
gi|18700242|gb|AAL77731.1| At2g18300/T30D6.19 [Arabidopsis thaliana]
gi|20197806|gb|AAD15506.2| expressed protein [Arabidopsis thaliana]
gi|330251658|gb|AEC06752.1| transcription factor bHLH64 [Arabidopsis thaliana]
Length = 335
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 80/129 (62%), Positives = 93/129 (72%), Gaps = 6/129 (4%)
Query: 312 EGKAN-GNGAVKAEDEGDDKQAKANNAKPPEPPKDYIHVRARRGQATDSHSLAERVRREK 370
+GK+N GN ++ + + + N K DYIHVRARRGQATD HSLAER RREK
Sbjct: 152 KGKSNMGNTEASSDTSKETSKGASENQKL-----DYIHVRARRGQATDRHSLAERARREK 206
Query: 371 ISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMKLASVNTRLELNVDAL 430
IS++MK LQD+VPGCNKVTGKA MLDEIINYVQ LQRQVEFLSMKLA +N LEL V+ +
Sbjct: 207 ISKKMKYLQDIVPGCNKVTGKAGMLDEIINYVQCLQRQVEFLSMKLAVLNPELELAVEDV 266
Query: 431 MSKDIYQPN 439
K Y N
Sbjct: 267 SVKQAYFTN 275
>gi|125546085|gb|EAY92224.1| hypothetical protein OsI_13945 [Oryza sativa Indica Group]
Length = 263
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 82/137 (59%), Positives = 99/137 (72%), Gaps = 7/137 (5%)
Query: 303 SKNKRCKPNEGKANGNGAVKAEDEGDDKQAKA----NNAKPPEPPKDYIHVRARRGQATD 358
S+ KR K ++ + N +++ E E D + A N P P +DYIHVRARRGQATD
Sbjct: 87 SEAKRFKASK---SDNSSLRTEAETDSRNASKSGDQNPPPPEPPKQDYIHVRARRGQATD 143
Query: 359 SHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMKLAS 418
SHSLAER RREKISERMK+LQDLVPGCNKV GKA +LDEIINY+Q+LQRQVEFLSMKL +
Sbjct: 144 SHSLAERARREKISERMKILQDLVPGCNKVIGKASVLDEIINYIQALQRQVEFLSMKLEA 203
Query: 419 VNTRLELNVDALMSKDI 435
VN + ++A KD
Sbjct: 204 VNAHVNNGIEAFPPKDF 220
>gi|34391435|gb|AAN18284.1| putative bHLH transcription factor [Arabidopsis thaliana]
Length = 288
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 86/137 (62%), Positives = 100/137 (72%), Gaps = 9/137 (6%)
Query: 304 KNKRCKPNEGKANG--NGAVKAEDEGD----DKQAKANNAKPPEPPK-DYIHVRARRGQA 356
+NKR KP EGK +KAEDE + K +N E K DYIHVRARRG+A
Sbjct: 75 QNKR-KP-EGKTEKREKKKIKAEDETEPSMKGKSNMSNTETSSEIQKPDYIHVRARRGEA 132
Query: 357 TDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMKL 416
TD HSLAER RREKIS++MK LQD+VPGCNKVTGKA MLDEIINYVQSLQ+QVEFLSMKL
Sbjct: 133 TDRHSLAERARREKISKKMKCLQDIVPGCNKVTGKAGMLDEIINYVQSLQQQVEFLSMKL 192
Query: 417 ASVNTRLELNVDALMSK 433
+ +N LE ++D L +K
Sbjct: 193 SVINPELECHIDDLSAK 209
>gi|15451016|gb|AAK96779.1| Unknown protein [Arabidopsis thaliana]
gi|23198360|gb|AAN15707.1| Unknown protein [Arabidopsis thaliana]
Length = 304
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 86/137 (62%), Positives = 100/137 (72%), Gaps = 9/137 (6%)
Query: 304 KNKRCKPNEGKANG--NGAVKAEDEGD----DKQAKANNAKPPEPPK-DYIHVRARRGQA 356
+NKR KP EGK +KAEDE + K +N E K DYIHVRARRG+A
Sbjct: 91 QNKR-KP-EGKTEKREKKKIKAEDETEPSMKGKSNMSNTETSSEIQKPDYIHVRARRGEA 148
Query: 357 TDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMKL 416
TD HSLAER RREKIS++MK LQD+VPGCNKVTGKA MLDEIINYVQSLQ+QVEFLSMKL
Sbjct: 149 TDRHSLAERARREKISKKMKCLQDIVPGCNKVTGKAGMLDEIINYVQSLQQQVEFLSMKL 208
Query: 417 ASVNTRLELNVDALMSK 433
+ +N LE ++D L +K
Sbjct: 209 SVINPELECHIDDLSAK 225
>gi|20127056|gb|AAM10947.1|AF488591_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 304
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 86/137 (62%), Positives = 100/137 (72%), Gaps = 9/137 (6%)
Query: 304 KNKRCKPNEGKANG--NGAVKAEDEGD----DKQAKANNAKPPEPPK-DYIHVRARRGQA 356
+NKR KP EGK +KAEDE + K +N E K DYIHVRARRG+A
Sbjct: 91 QNKR-KP-EGKTEKREKKKIKAEDETEPSMKGKSNMSNTETSSEIQKPDYIHVRARRGEA 148
Query: 357 TDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMKL 416
TD HSLAER RREKIS++MK LQD+VPGCNKVTGKA MLDEIINYVQSLQ+QVEFLSMKL
Sbjct: 149 TDRHSLAERARREKISKKMKCLQDIVPGCNKVTGKAGMLDEIINYVQSLQQQVEFLSMKL 208
Query: 417 ASVNTRLELNVDALMSK 433
+ +N LE ++D L +K
Sbjct: 209 SVINPELECHIDDLSAK 225
>gi|15234436|ref|NP_195372.1| transcription factor BEE 2 [Arabidopsis thaliana]
gi|75305715|sp|Q93VJ4.1|BEE2_ARATH RecName: Full=Transcription factor BEE 2; AltName: Full=Basic
helix-loop-helix protein 58; Short=AtbHLH58; Short=bHLH
58; AltName: Full=Protein Brassinosteroid enhanced
expression 2; AltName: Full=Transcription factor EN 80;
AltName: Full=bHLH transcription factor bHLH058
gi|13877937|gb|AAK44046.1|AF370231_1 unknown protein [Arabidopsis thaliana]
gi|16323468|gb|AAL15228.1| unknown protein [Arabidopsis thaliana]
gi|332661269|gb|AEE86669.1| transcription factor BEE 2 [Arabidopsis thaliana]
Length = 304
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 86/137 (62%), Positives = 100/137 (72%), Gaps = 9/137 (6%)
Query: 304 KNKRCKPNEGKANG--NGAVKAEDEGD----DKQAKANNAKPPEPPK-DYIHVRARRGQA 356
+NKR KP EGK +KAEDE + K +N E K DYIHVRARRG+A
Sbjct: 91 QNKR-KP-EGKTEKREKKKIKAEDETEPSMKGKSNMSNTETSSEIQKPDYIHVRARRGEA 148
Query: 357 TDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMKL 416
TD HSLAER RREKIS++MK LQD+VPGCNKVTGKA MLDEIINYVQSLQ+QVEFLSMKL
Sbjct: 149 TDRHSLAERARREKISKKMKCLQDIVPGCNKVTGKAGMLDEIINYVQSLQQQVEFLSMKL 208
Query: 417 ASVNTRLELNVDALMSK 433
+ +N LE ++D L +K
Sbjct: 209 SVINPELECHIDDLSAK 225
>gi|449473858|ref|XP_004154003.1| PREDICTED: uncharacterized protein LOC101205943 [Cucumis sativus]
gi|449518641|ref|XP_004166345.1| PREDICTED: uncharacterized LOC101205943 [Cucumis sativus]
Length = 372
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 86/133 (64%), Positives = 93/133 (69%), Gaps = 13/133 (9%)
Query: 311 NEGKANGNGAVKAEDEGDDKQAKANNAKPPEPPKD---------YIHVRARRGQATDSHS 361
N KA G V+ E D K AK+ E KD YIHVRARRGQATDSHS
Sbjct: 134 NGKKAKNKGEVEEGKERDQK-AKSGKKLLEEKLKDSEDGGATTGYIHVRARRGQATDSHS 192
Query: 362 LAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMKLASVN- 420
LAERVRREKISERMK LQ LVPGC+KVTGKALMLDEIINYVQSLQ QVEFLSMKLAS+N
Sbjct: 193 LAERVRREKISERMKTLQRLVPGCDKVTGKALMLDEIINYVQSLQNQVEFLSMKLASLNP 252
Query: 421 --TRLELNVDALM 431
+++D LM
Sbjct: 253 IFFDFRMDLDGLM 265
>gi|21537215|gb|AAM61556.1| unknown [Arabidopsis thaliana]
Length = 288
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 86/137 (62%), Positives = 100/137 (72%), Gaps = 9/137 (6%)
Query: 304 KNKRCKPNEGKANG--NGAVKAEDEGD----DKQAKANNAKPPEPPK-DYIHVRARRGQA 356
+NKR KP EGK +KAEDE + K +N E K DYIHVRARRG+A
Sbjct: 75 QNKR-KP-EGKTEKREKKKIKAEDETEPSMKGKSNMSNXETSSEIQKPDYIHVRARRGEA 132
Query: 357 TDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMKL 416
TD HSLAER RREKIS++MK LQD+VPGCNKVTGKA MLDEIINYVQSLQ+QVEFLSMKL
Sbjct: 133 TDRHSLAERARREKISKKMKCLQDIVPGCNKVTGKAGMLDEIINYVQSLQQQVEFLSMKL 192
Query: 417 ASVNTRLELNVDALMSK 433
+ +N LE ++D L +K
Sbjct: 193 SVINPELECHIDDLSAK 209
>gi|449454949|ref|XP_004145216.1| PREDICTED: transcription factor bHLH49-like [Cucumis sativus]
Length = 340
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 86/133 (64%), Positives = 93/133 (69%), Gaps = 13/133 (9%)
Query: 311 NEGKANGNGAVKAEDEGDDKQAKANNAKPPEPPKD---------YIHVRARRGQATDSHS 361
N KA G V+ E D K AK+ E KD YIHVRARRGQATDSHS
Sbjct: 102 NGKKAKNKGEVEEGKERDQK-AKSGKKLLEEKLKDSEDGGATTGYIHVRARRGQATDSHS 160
Query: 362 LAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMKLASVN- 420
LAERVRREKISERMK LQ LVPGC+KVTGKALMLDEIINYVQSLQ QVEFLSMKLAS+N
Sbjct: 161 LAERVRREKISERMKTLQRLVPGCDKVTGKALMLDEIINYVQSLQNQVEFLSMKLASLNP 220
Query: 421 --TRLELNVDALM 431
+++D LM
Sbjct: 221 IFFDFRMDLDGLM 233
>gi|357148647|ref|XP_003574844.1| PREDICTED: transcription factor bHLH137-like [Brachypodium
distachyon]
Length = 294
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 87/157 (55%), Positives = 106/157 (67%), Gaps = 21/157 (13%)
Query: 284 ASPSVNNTTKVAEANASE----SSKNKRCKPNEGKANGNGAVKAEDEGDDKQAKANNAKP 339
S SV K + A+ S S+ +K CK +GK+ K E D++
Sbjct: 70 GSASVGRKRKASTADDSSATLSSAHSKDCK--DGKSRRG---KREKSSTDQE-------- 116
Query: 340 PEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEII 399
E PK YIHVRARRGQATDSHSLAERVRRE+ISERM+LLQ LVPGC+KVTGKAL+LDEII
Sbjct: 117 -EAPKGYIHVRARRGQATDSHSLAERVRRERISERMRLLQTLVPGCDKVTGKALILDEII 175
Query: 400 NYVQSLQRQVEFLSMKLASVNTRLE---LNVDALMSK 433
NYVQSLQ QVEFLSM++AS++ L L+ D L+ +
Sbjct: 176 NYVQSLQNQVEFLSMRIASMSPVLYGFGLDSDGLLDQ 212
>gi|5923912|gb|AAD56411.1|AF185269_1 bHLH transcription factor GBOF-1 [Tulipa gesneriana]
Length = 321
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 90/161 (55%), Positives = 103/161 (63%), Gaps = 24/161 (14%)
Query: 269 RKRKAVSKGKGKETAASPSVNNTTKVAEANASESSKNKRCKPNEGKANGNGAVKAEDEGD 328
RKRK S G + S TK S+ + KP KAN + +K + +
Sbjct: 78 RKRKDKSDGSCMTSVQSKGTKRETK---------SRKSQKKP---KANESDEMKERTQEE 125
Query: 329 DKQAKANNAKPPEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKV 388
+ E P YIHVRARRGQATDSHSLAERVRREKISERMKLLQ LVPGC+KV
Sbjct: 126 E-----------EAPVGYIHVRARRGQATDSHSLAERVRREKISERMKLLQALVPGCDKV 174
Query: 389 TGKALMLDEIINYVQSLQRQVEFLSMKLASVNTRL-ELNVD 428
TGKA+MLDEIINYVQSLQ QVEFLSMKLA+V+ L E +D
Sbjct: 175 TGKAVMLDEIINYVQSLQNQVEFLSMKLATVSPMLYEFGLD 215
>gi|168009958|ref|XP_001757672.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162691366|gb|EDQ77729.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 83
Score = 152 bits (385), Expect = 3e-34, Method: Composition-based stats.
Identities = 71/83 (85%), Positives = 81/83 (97%)
Query: 344 KDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQ 403
+DYIHVRARRGQATDSHSLAERVRREKISERMK LQDLVPGC+K+TGKA+ML+EIINYVQ
Sbjct: 1 QDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCSKITGKAVMLEEIINYVQ 60
Query: 404 SLQRQVEFLSMKLASVNTRLELN 426
SLQRQ+EFLSMKLA+V+ RL++N
Sbjct: 61 SLQRQIEFLSMKLAAVDPRLDIN 83
>gi|297836564|ref|XP_002886164.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297332004|gb|EFH62423.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 337
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 90/175 (51%), Positives = 105/175 (60%), Gaps = 18/175 (10%)
Query: 272 KAVSKGKGKETAASPSVNNTTKVAEANASESSKNKR----CKPNEGKANGNGAVKAEDEG 327
+A+S+ ++ K E N + + KNKR E K V+AE E
Sbjct: 90 EAISRTSSCHMEPVDTIEVLLKTGEENRAIALKNKRNPEVKTRGEEKTEKKIKVEAETES 149
Query: 328 DDK-------------QAKANNAKPPEPPK-DYIHVRARRGQATDSHSLAERVRREKISE 373
K +K + K E K DYIHVRARRGQATD HSLAER RREKIS+
Sbjct: 150 SMKGKSNMRNTEASSDTSKETSKKASEIQKLDYIHVRARRGQATDRHSLAERARREKISK 209
Query: 374 RMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMKLASVNTRLELNVD 428
+MK LQD+VPGCNKVTGKA MLDEIINYVQ LQRQVEFLSMKLA +N LEL V+
Sbjct: 210 KMKYLQDIVPGCNKVTGKAGMLDEIINYVQCLQRQVEFLSMKLAVLNPELELAVE 264
>gi|223702424|gb|ACN21643.1| putative basic helix-loop-helix protein BHLH6 [Lotus japonicus]
Length = 364
Score = 152 bits (384), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 87/167 (52%), Positives = 109/167 (65%), Gaps = 31/167 (18%)
Query: 289 NNTTKVAEANASE-SSKNKRCKPNEGKAN----GNGAVKAEDEG--------DDKQAKAN 335
NN + +E + S+ S NKR + G + G G +KA + D++ K +
Sbjct: 53 NNDSTTSEDDCSKNDSGNKRIRLGGGGSTVENGGGGGLKAAEASSVAGSNNSDEQSTKPS 112
Query: 336 NAKPPEPPKDYIHVRARRGQATDSHSLAERV----------------RREKISERMKLLQ 379
++PP+ +DYIHVRARRGQATDSHS+AERV RREKISERMK+LQ
Sbjct: 113 ESEPPK--QDYIHVRARRGQATDSHSIAERVIHFSLCLSISYLLLVARREKISERMKILQ 170
Query: 380 DLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMKLASVNTRLELN 426
DLVPGCNK+ GKAL+LDEIINY+QSLQ QVEFLSMKL +VN+R LN
Sbjct: 171 DLVPGCNKMIGKALVLDEIINYIQSLQHQVEFLSMKLEAVNSRANLN 217
>gi|226500746|ref|NP_001149110.1| LOC100282732 [Zea mays]
gi|195624818|gb|ACG34239.1| bHLH transcription factor GBOF-1 [Zea mays]
Length = 287
Score = 152 bits (384), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 81/153 (52%), Positives = 104/153 (67%), Gaps = 11/153 (7%)
Query: 279 GKETAASPSVNNTTKVAEAN--ASESSKNKRC-KPNEGKANGNGAVKAEDEGDDKQAKAN 335
G TA S S+ ++ V + + + S NK C K E + +++D + +K +
Sbjct: 30 GTATADSASLETSSGVLDTSPRGTSSGDNKACRKHKEDSGASFSSARSKDSNSKESSKRS 89
Query: 336 NAK--------PPEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNK 387
K E PK YIHVRARRGQATD+HSLAERVRRE+ISERM++LQ LVPGC+K
Sbjct: 90 GGKRDRSSKKVDEEEPKGYIHVRARRGQATDNHSLAERVRRERISERMRVLQALVPGCDK 149
Query: 388 VTGKALMLDEIINYVQSLQRQVEFLSMKLASVN 420
VTGKAL+LDEIINYVQSLQ QVEFLSM++AS++
Sbjct: 150 VTGKALILDEIINYVQSLQNQVEFLSMRIASLS 182
>gi|449437607|ref|XP_004136583.1| PREDICTED: transcription factor bHLH60-like [Cucumis sativus]
gi|449501894|ref|XP_004161487.1| PREDICTED: transcription factor bHLH60-like [Cucumis sativus]
Length = 369
Score = 152 bits (384), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 78/147 (53%), Positives = 106/147 (72%), Gaps = 13/147 (8%)
Query: 301 ESSKNKRCKPNEGKANGNGAVKAEDEGDDKQAKANNAKPPEPPKDYIHVRARRGQATDSH 360
E++ + K E + G G+ K ++ A+ K P Y+HVRARRGQATDSH
Sbjct: 162 ENTNQRSAKRKEREKKGRGSTKKSKNESNEDAE----KLP-----YVHVRARRGQATDSH 212
Query: 361 SLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMKLASVN 420
SLAER RREKI+ RMKLLQ+LVPGCNK++G AL+LDEIIN+VQSLQRQVEFLSM+LA+VN
Sbjct: 213 SLAERARREKINARMKLLQELVPGCNKISGTALVLDEIINHVQSLQRQVEFLSMRLAAVN 272
Query: 421 TRLELNVDALMSKDIYQPNKPLPHSIF 447
R++ N++++++ + N+P+ S F
Sbjct: 273 PRVDFNIESILATE----NEPILESNF 295
>gi|238009798|gb|ACR35934.1| unknown [Zea mays]
Length = 287
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 81/153 (52%), Positives = 104/153 (67%), Gaps = 11/153 (7%)
Query: 279 GKETAASPSVNNTTKVAEAN--ASESSKNKRC-KPNEGKANGNGAVKAEDEGDDKQAKAN 335
G TA S S+ ++ V + + + S NK C K E + +++D + +K +
Sbjct: 30 GTATADSASLETSSGVLDTSPRGTSSDDNKACRKHKEDSGASFSSARSKDSNSKESSKRS 89
Query: 336 NAK--------PPEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNK 387
K E PK YIHVRARRGQATD+HSLAERVRRE+ISERM++LQ LVPGC+K
Sbjct: 90 GGKRDRSSKKVDEEEPKGYIHVRARRGQATDNHSLAERVRRERISERMRVLQALVPGCDK 149
Query: 388 VTGKALMLDEIINYVQSLQRQVEFLSMKLASVN 420
VTGKAL+LDEIINYVQSLQ QVEFLSM++AS++
Sbjct: 150 VTGKALILDEIINYVQSLQNQVEFLSMRIASLS 182
>gi|334184293|ref|NP_001189548.1| transcription factor bHLH64 [Arabidopsis thaliana]
gi|330251660|gb|AEC06754.1| transcription factor bHLH64 [Arabidopsis thaliana]
Length = 364
Score = 151 bits (382), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 77/118 (65%), Positives = 89/118 (75%), Gaps = 6/118 (5%)
Query: 312 EGKAN-GNGAVKAEDEGDDKQAKANNAKPPEPPKDYIHVRARRGQATDSHSLAERVRREK 370
+GK+N GN ++ + + + N K DYIHVRARRGQATD HSLAER RREK
Sbjct: 152 KGKSNMGNTEASSDTSKETSKGASENQKL-----DYIHVRARRGQATDRHSLAERARREK 206
Query: 371 ISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMKLASVNTRLELNVD 428
IS++MK LQD+VPGCNKVTGKA MLDEIINYVQ LQRQVEFLSMKLA +N LEL V+
Sbjct: 207 ISKKMKYLQDIVPGCNKVTGKAGMLDEIINYVQCLQRQVEFLSMKLAVLNPELELAVE 264
>gi|30680338|ref|NP_849976.1| transcription factor bHLH64 [Arabidopsis thaliana]
gi|218563534|sp|Q9ZPW3.3|BH064_ARATH RecName: Full=Transcription factor bHLH64; AltName: Full=Basic
helix-loop-helix protein 64; Short=AtbHLH64; Short=bHLH
64; AltName: Full=Transcription factor EN 79; AltName:
Full=bHLH transcription factor bHLH064
gi|330251659|gb|AEC06753.1| transcription factor bHLH64 [Arabidopsis thaliana]
Length = 337
Score = 151 bits (382), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 77/118 (65%), Positives = 89/118 (75%), Gaps = 6/118 (5%)
Query: 312 EGKAN-GNGAVKAEDEGDDKQAKANNAKPPEPPKDYIHVRARRGQATDSHSLAERVRREK 370
+GK+N GN ++ + + + N K DYIHVRARRGQATD HSLAER RREK
Sbjct: 152 KGKSNMGNTEASSDTSKETSKGASENQKL-----DYIHVRARRGQATDRHSLAERARREK 206
Query: 371 ISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMKLASVNTRLELNVD 428
IS++MK LQD+VPGCNKVTGKA MLDEIINYVQ LQRQVEFLSMKLA +N LEL V+
Sbjct: 207 ISKKMKYLQDIVPGCNKVTGKAGMLDEIINYVQCLQRQVEFLSMKLAVLNPELELAVE 264
>gi|312281887|dbj|BAJ33809.1| unnamed protein product [Thellungiella halophila]
Length = 304
Score = 151 bits (382), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 86/158 (54%), Positives = 104/158 (65%), Gaps = 9/158 (5%)
Query: 296 EANASESSKNKRCKPNEGKANGNGAVKAEDEGDD------KQAKANNAKPPEPPK-DYIH 348
E N + S +NKR KP EGK K + E + K +N E K DYIH
Sbjct: 83 EVNRAISFQNKR-KP-EGKTEKREKKKIKTEAETETSMKGKSNMSNTETSSEIQKPDYIH 140
Query: 349 VRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQ 408
VRARRG+ATD HSLAER RREKIS++MK LQD+VPGC KVTGKA MLDEIINYVQSLQ+Q
Sbjct: 141 VRARRGEATDRHSLAERARREKISKKMKCLQDIVPGCTKVTGKAGMLDEIINYVQSLQQQ 200
Query: 409 VEFLSMKLASVNTRLELNVDALMSKDIYQPNKPLPHSI 446
VEFLSMKL+ +N LE +++ L +K LP ++
Sbjct: 201 VEFLSMKLSVLNPELEFHINELSTKQFQAYFADLPEAV 238
>gi|20127068|gb|AAM10953.1|AF488597_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 320
Score = 151 bits (381), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 77/118 (65%), Positives = 89/118 (75%), Gaps = 6/118 (5%)
Query: 312 EGKAN-GNGAVKAEDEGDDKQAKANNAKPPEPPKDYIHVRARRGQATDSHSLAERVRREK 370
+GK+N GN ++ + + + N K DYIHVRARRGQATD HSLAER RREK
Sbjct: 135 KGKSNMGNTEASSDTSKETSKGASENQKL-----DYIHVRARRGQATDRHSLAERARREK 189
Query: 371 ISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMKLASVNTRLELNVD 428
IS++MK LQD+VPGCNKVTGKA MLDEIINYVQ LQRQVEFLSMKLA +N LEL V+
Sbjct: 190 ISKKMKYLQDIVPGCNKVTGKAGMLDEIINYVQCLQRQVEFLSMKLAVLNPELELAVE 247
>gi|449462268|ref|XP_004148863.1| PREDICTED: transcription factor bHLH62-like [Cucumis sativus]
Length = 187
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 70/93 (75%), Positives = 85/93 (91%), Gaps = 1/93 (1%)
Query: 345 DYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQS 404
DY+HVRARRG+ATDSHSLAER RREKISERMK LQ+LVPGCNK+ GKA MLDEIINYVQS
Sbjct: 2 DYVHVRARRGKATDSHSLAERARREKISERMKYLQNLVPGCNKIAGKAGMLDEIINYVQS 61
Query: 405 LQRQVEFLSMKLASVNTRLE-LNVDALMSKDIY 436
LQ+QVEFLSMK+A++N R++ +NVD L++K ++
Sbjct: 62 LQQQVEFLSMKVAALNHRVDFINVDDLLAKQMF 94
>gi|242049812|ref|XP_002462650.1| hypothetical protein SORBIDRAFT_02g029530 [Sorghum bicolor]
gi|241926027|gb|EER99171.1| hypothetical protein SORBIDRAFT_02g029530 [Sorghum bicolor]
Length = 281
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 95/223 (42%), Positives = 127/223 (56%), Gaps = 20/223 (8%)
Query: 279 GKETAASPSVNNTTKVAEAN--ASESSKNKRCKPNEGKANGNGAVKAEDEGDDKQAKANN 336
G TA S S+ ++ V + + + S K KP E A+ + A ++D + K
Sbjct: 30 GAATADSASLETSSGVLDTSPQGTASDDKKPRKPREDSASFSSA-HSKDSNSKESTKKKG 88
Query: 337 AK--------PPEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKV 388
K E PK YIHVRARRGQATDSHSLAERVRRE+ISERM++LQ LVPGC+KV
Sbjct: 89 GKRDRSSKEVDEEEPKGYIHVRARRGQATDSHSLAERVRRERISERMRVLQALVPGCDKV 148
Query: 389 TGKALMLDEIINYVQSLQRQVEFLSMKLASVNTRLE---LNVDAL------MSKDIYQPN 439
TGKAL+LDEIINYVQSLQ QVEFLSM++AS++ L ++ DA + ++
Sbjct: 149 TGKALILDEIINYVQSLQNQVEFLSMRIASLSPVLYGFGMDTDAFSDHTQKIEGMLHHEA 208
Query: 440 KPLPHSIFQIDSSASAFFSHQPQQNPALHGNISNGTMTQCPVD 482
+P S+ S + +H +P+ + GT P D
Sbjct: 209 LGMPSSVLNRPPSETHMDTHNSTSSPSYEVHGDGGTSISFPQD 251
>gi|224094803|ref|XP_002310242.1| predicted protein [Populus trichocarpa]
gi|222853145|gb|EEE90692.1| predicted protein [Populus trichocarpa]
Length = 108
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 70/89 (78%), Positives = 77/89 (86%)
Query: 332 AKANNAKPPEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGK 391
+K N P DYIHVRARRGQATDSHSLAER RREKIS++MK LQDLVPGCNK+TG+
Sbjct: 20 SKENQKTSALPKTDYIHVRARRGQATDSHSLAERARREKISKKMKCLQDLVPGCNKITGR 79
Query: 392 ALMLDEIINYVQSLQRQVEFLSMKLASVN 420
A MLDEIINYVQSLQRQVEF+SMKLA+VN
Sbjct: 80 AGMLDEIINYVQSLQRQVEFISMKLAAVN 108
>gi|225441702|ref|XP_002282897.1| PREDICTED: transcription factor bHLH60 [Vitis vinifera]
gi|297739713|emb|CBI29895.3| unnamed protein product [Vitis vinifera]
Length = 364
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 66/87 (75%), Positives = 82/87 (94%)
Query: 346 YIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSL 405
Y+HVRARRGQATDSHSLAER RREKI+ RMKLLQ+LVPGCNK++G AL+LDEII++VQSL
Sbjct: 194 YVHVRARRGQATDSHSLAERARREKINARMKLLQELVPGCNKISGTALVLDEIISHVQSL 253
Query: 406 QRQVEFLSMKLASVNTRLELNVDALMS 432
QRQVEFLSM+LA+VN R++ N+D+L++
Sbjct: 254 QRQVEFLSMRLAAVNPRIDFNLDSLLA 280
>gi|242079823|ref|XP_002444680.1| hypothetical protein SORBIDRAFT_07g025920 [Sorghum bicolor]
gi|241941030|gb|EES14175.1| hypothetical protein SORBIDRAFT_07g025920 [Sorghum bicolor]
Length = 293
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 80/139 (57%), Positives = 101/139 (72%), Gaps = 9/139 (6%)
Query: 283 AASPSVNNTTKVAEANASESS-KNKRCKPNEGKANGNGAVKAEDEGDDKQAKANNAKPPE 341
+ASP + K E +A+ SS ++K CK E K+ + +K+ + + E
Sbjct: 63 SASP-MERKRKATEDSATLSSAQSKDCKQQESKSK-------RGKRPNKETEEKSTTEDE 114
Query: 342 PPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINY 401
K YIHVRARRGQATDSHSLAERVRRE+ISERM++LQ LVPGC+KVTGKAL+LDEIINY
Sbjct: 115 ATKGYIHVRARRGQATDSHSLAERVRRERISERMRMLQALVPGCDKVTGKALILDEIINY 174
Query: 402 VQSLQRQVEFLSMKLASVN 420
VQSLQ QVEFLSM++AS++
Sbjct: 175 VQSLQNQVEFLSMRIASMS 193
>gi|414869721|tpg|DAA48278.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 314
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 77/137 (56%), Positives = 95/137 (69%), Gaps = 15/137 (10%)
Query: 299 ASESSKNKRCKPNEGKANGNGAVKAEDEGDDKQAKANNAKPP---------------EPP 343
A+ S ++ KP E A + A ED +++K+ K P E
Sbjct: 74 AAASPMERKRKPAEDSATLSSAQSKEDCKQQQESKSRRGKRPHNKEANTEEKSATEDEAT 133
Query: 344 KDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQ 403
+ YIHVRARRGQATDSHSLAERVRRE+ISERM++LQ LVPGC+KVTGKAL+LDEIINYVQ
Sbjct: 134 RGYIHVRARRGQATDSHSLAERVRRERISERMRMLQALVPGCDKVTGKALILDEIINYVQ 193
Query: 404 SLQRQVEFLSMKLASVN 420
SLQ QVEFLSM++AS++
Sbjct: 194 SLQNQVEFLSMRIASMS 210
>gi|242041659|ref|XP_002468224.1| hypothetical protein SORBIDRAFT_01g042070 [Sorghum bicolor]
gi|241922078|gb|EER95222.1| hypothetical protein SORBIDRAFT_01g042070 [Sorghum bicolor]
Length = 291
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 67/85 (78%), Positives = 80/85 (94%)
Query: 344 KDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQ 403
+DY+HVRA+RGQAT+SHSLAER RREKI+ERMKLLQDLVPGCNK+TGKA+MLDEIINYVQ
Sbjct: 118 EDYVHVRAKRGQATNSHSLAERFRREKINERMKLLQDLVPGCNKITGKAMMLDEIINYVQ 177
Query: 404 SLQRQVEFLSMKLASVNTRLELNVD 428
SLQRQVEFLSMKL++++ L ++D
Sbjct: 178 SLQRQVEFLSMKLSAISPELNCDLD 202
>gi|224137946|ref|XP_002322691.1| predicted protein [Populus trichocarpa]
gi|222867321|gb|EEF04452.1| predicted protein [Populus trichocarpa]
Length = 291
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 69/109 (63%), Positives = 90/109 (82%)
Query: 327 GDDKQAKANNAKPPEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCN 386
G K++K ++ E Y+HVRARRGQATDSHSLAER RREKI++RMKLLQ+LVPGCN
Sbjct: 160 GASKKSKNEGSQQEEEKLPYVHVRARRGQATDSHSLAERARREKINQRMKLLQELVPGCN 219
Query: 387 KVTGKALMLDEIINYVQSLQRQVEFLSMKLASVNTRLELNVDALMSKDI 435
K++G AL+LDEIIN+VQ LQRQVE LSM+LA+VN R++ N+D+++S +
Sbjct: 220 KISGTALVLDEIINHVQFLQRQVEILSMRLAAVNPRIDFNLDSMLSAEF 268
>gi|212721642|ref|NP_001131806.1| uncharacterized protein LOC100193179 [Zea mays]
gi|194692596|gb|ACF80382.1| unknown [Zea mays]
gi|414869722|tpg|DAA48279.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 315
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 77/137 (56%), Positives = 95/137 (69%), Gaps = 15/137 (10%)
Query: 299 ASESSKNKRCKPNEGKANGNGAVKAEDEGDDKQAKANNAKPP---------------EPP 343
A+ S ++ KP E A + A ED +++K+ K P E
Sbjct: 74 AAASPMERKRKPAEDSATLSSAQSKEDCKQQQESKSRRGKRPHNKEANTEEKSATEDEAT 133
Query: 344 KDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQ 403
+ YIHVRARRGQATDSHSLAERVRRE+ISERM++LQ LVPGC+KVTGKAL+LDEIINYVQ
Sbjct: 134 RGYIHVRARRGQATDSHSLAERVRRERISERMRMLQALVPGCDKVTGKALILDEIINYVQ 193
Query: 404 SLQRQVEFLSMKLASVN 420
SLQ QVEFLSM++AS++
Sbjct: 194 SLQNQVEFLSMRIASMS 210
>gi|356511528|ref|XP_003524477.1| PREDICTED: transcription factor bHLH77-like [Glycine max]
Length = 324
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 73/96 (76%), Positives = 81/96 (84%), Gaps = 3/96 (3%)
Query: 341 EPPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIIN 400
+PP YIHVRARRGQATDSHSLAERVRREKIS+RM LQ LVPGC+KVTGKAL+LDEIIN
Sbjct: 130 DPPTGYIHVRARRGQATDSHSLAERVRREKISKRMTTLQRLVPGCDKVTGKALVLDEIIN 189
Query: 401 YVQSLQRQVEFLSMKLASVNTRL---ELNVDALMSK 433
YVQSLQ QVEFLSMKLASVN +++D LM +
Sbjct: 190 YVQSLQNQVEFLSMKLASVNPMFFDSAMDLDTLMVR 225
>gi|414865635|tpg|DAA44192.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 185
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 69/96 (71%), Positives = 84/96 (87%), Gaps = 2/96 (2%)
Query: 333 KANNAKPPEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKA 392
KA +A+ +DY+HVRA+RGQAT+SHSLAER RREKI+ERMKLLQDLVPGCNK+TGKA
Sbjct: 84 KAGDARAKR--EDYVHVRAKRGQATNSHSLAERFRREKINERMKLLQDLVPGCNKITGKA 141
Query: 393 LMLDEIINYVQSLQRQVEFLSMKLASVNTRLELNVD 428
+MLDEIINYVQSLQRQ+EFLSMKL+++ L ++D
Sbjct: 142 MMLDEIINYVQSLQRQIEFLSMKLSAIGPGLNCDLD 177
>gi|224120394|ref|XP_002331037.1| predicted protein [Populus trichocarpa]
gi|222872967|gb|EEF10098.1| predicted protein [Populus trichocarpa]
Length = 354
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 66/89 (74%), Positives = 83/89 (93%)
Query: 346 YIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSL 405
Y+HVRARRGQATDSHSLAER RREKI++RMKLLQ+LVPGCNK++G AL+LDEIIN+VQSL
Sbjct: 174 YVHVRARRGQATDSHSLAERARREKINQRMKLLQELVPGCNKISGTALVLDEIINHVQSL 233
Query: 406 QRQVEFLSMKLASVNTRLELNVDALMSKD 434
Q QVEFLSM+LA+VN R++ N+D+++S +
Sbjct: 234 QCQVEFLSMRLAAVNPRIDFNLDSMLSAE 262
>gi|414865634|tpg|DAA44191.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 262
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 69/96 (71%), Positives = 84/96 (87%), Gaps = 2/96 (2%)
Query: 333 KANNAKPPEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKA 392
KA +A+ +DY+HVRA+RGQAT+SHSLAER RREKI+ERMKLLQDLVPGCNK+TGKA
Sbjct: 84 KAGDARAKR--EDYVHVRAKRGQATNSHSLAERFRREKINERMKLLQDLVPGCNKITGKA 141
Query: 393 LMLDEIINYVQSLQRQVEFLSMKLASVNTRLELNVD 428
+MLDEIINYVQSLQRQ+EFLSMKL+++ L ++D
Sbjct: 142 MMLDEIINYVQSLQRQIEFLSMKLSAIGPGLNCDLD 177
>gi|414589941|tpg|DAA40512.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 295
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 68/80 (85%), Positives = 76/80 (95%)
Query: 341 EPPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIIN 400
E PK YIHVRARRGQATDSHSLAERVRRE+ISERM++LQ LVPGC+KVTGKAL+LDEIIN
Sbjct: 103 EEPKGYIHVRARRGQATDSHSLAERVRRERISERMRVLQALVPGCDKVTGKALVLDEIIN 162
Query: 401 YVQSLQRQVEFLSMKLASVN 420
YVQSLQ QVEFLSMK+AS++
Sbjct: 163 YVQSLQNQVEFLSMKIASLS 182
>gi|293333598|ref|NP_001167725.1| uncharacterized protein LOC100381413 [Zea mays]
gi|223943625|gb|ACN25896.1| unknown [Zea mays]
gi|414865638|tpg|DAA44195.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 211
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 69/96 (71%), Positives = 84/96 (87%), Gaps = 2/96 (2%)
Query: 333 KANNAKPPEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKA 392
KA +A+ +DY+HVRA+RGQAT+SHSLAER RREKI+ERMKLLQDLVPGCNK+TGKA
Sbjct: 110 KAGDARAKR--EDYVHVRAKRGQATNSHSLAERFRREKINERMKLLQDLVPGCNKITGKA 167
Query: 393 LMLDEIINYVQSLQRQVEFLSMKLASVNTRLELNVD 428
+MLDEIINYVQSLQRQ+EFLSMKL+++ L ++D
Sbjct: 168 MMLDEIINYVQSLQRQIEFLSMKLSAIGPGLNCDLD 203
>gi|223945659|gb|ACN26913.1| unknown [Zea mays]
Length = 267
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 69/96 (71%), Positives = 84/96 (87%), Gaps = 2/96 (2%)
Query: 333 KANNAKPPEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKA 392
KA +A+ +DY+HVRA+RGQAT+SHSLAER RREKI+ERMKLLQDLVPGCNK+TGKA
Sbjct: 110 KAGDARAKR--EDYVHVRAKRGQATNSHSLAERFRREKINERMKLLQDLVPGCNKITGKA 167
Query: 393 LMLDEIINYVQSLQRQVEFLSMKLASVNTRLELNVD 428
+MLDEIINYVQSLQRQ+EFLSMKL+++ L ++D
Sbjct: 168 MMLDEIINYVQSLQRQIEFLSMKLSAIGPGLNCDLD 203
>gi|212721128|ref|NP_001132785.1| uncharacterized protein LOC100194274 [Zea mays]
gi|194695392|gb|ACF81780.1| unknown [Zea mays]
gi|414589942|tpg|DAA40513.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 305
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 68/80 (85%), Positives = 76/80 (95%)
Query: 341 EPPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIIN 400
E PK YIHVRARRGQATDSHSLAERVRRE+ISERM++LQ LVPGC+KVTGKAL+LDEIIN
Sbjct: 113 EEPKGYIHVRARRGQATDSHSLAERVRRERISERMRVLQALVPGCDKVTGKALVLDEIIN 172
Query: 401 YVQSLQRQVEFLSMKLASVN 420
YVQSLQ QVEFLSMK+AS++
Sbjct: 173 YVQSLQNQVEFLSMKIASLS 192
>gi|414865637|tpg|DAA44194.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 289
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 69/96 (71%), Positives = 84/96 (87%), Gaps = 2/96 (2%)
Query: 333 KANNAKPPEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKA 392
KA +A+ +DY+HVRA+RGQAT+SHSLAER RREKI+ERMKLLQDLVPGCNK+TGKA
Sbjct: 110 KAGDARAKR--EDYVHVRAKRGQATNSHSLAERFRREKINERMKLLQDLVPGCNKITGKA 167
Query: 393 LMLDEIINYVQSLQRQVEFLSMKLASVNTRLELNVD 428
+MLDEIINYVQSLQRQ+EFLSMKL+++ L ++D
Sbjct: 168 MMLDEIINYVQSLQRQIEFLSMKLSAIGPGLNCDLD 203
>gi|89257428|gb|ABD64920.1| bHLH transcription factor, putative [Brassica oleracea]
Length = 155
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 71/103 (68%), Positives = 85/103 (82%)
Query: 330 KQAKANNAKPPEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVT 389
K+ +A++ KPPEPPKDYIHVRARRGQ DSH AERVRREKISE + LLQDLVP +++T
Sbjct: 2 KKLEADDTKPPEPPKDYIHVRARRGQPADSHRFAERVRREKISEMLTLLQDLVPDSSRIT 61
Query: 390 GKALMLDEIINYVQSLQRQVEFLSMKLASVNTRLELNVDALMS 432
GKA LDEIINYVQSL+RQVE L MKLA++N R+E N +A +S
Sbjct: 62 GKADSLDEIINYVQSLKRQVELLYMKLATINPRMESNRNAALS 104
>gi|242047764|ref|XP_002461628.1| hypothetical protein SORBIDRAFT_02g005713 [Sorghum bicolor]
gi|241925005|gb|EER98149.1| hypothetical protein SORBIDRAFT_02g005713 [Sorghum bicolor]
Length = 178
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 70/94 (74%), Positives = 78/94 (82%)
Query: 345 DYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQS 404
DYIHVRARRGQATDSHSLAER RREKISERMK+LQD+VPGCNKV GKA +LDEIINY+QS
Sbjct: 46 DYIHVRARRGQATDSHSLAERARREKISERMKVLQDIVPGCNKVIGKASVLDEIINYIQS 105
Query: 405 LQRQVEFLSMKLASVNTRLELNVDALMSKDIYQP 438
LQRQVEFLSMKL ++N + A +KD P
Sbjct: 106 LQRQVEFLSMKLETINAHMNNATVAFPTKDFGAP 139
>gi|326506812|dbj|BAJ91447.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326510963|dbj|BAJ91829.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 353
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 84/147 (57%), Positives = 96/147 (65%), Gaps = 17/147 (11%)
Query: 308 CKPNEGKAN------GNGAVKAEDEGDDKQAKANNAKPPEPP-----KDYIHVRARRGQA 356
CK GK GA K E + KA K PE DYIHVRARRGQA
Sbjct: 102 CKRPRGKQQLRDPDEAGGAAKGRPE----KPKACARKKPEAAAAGQKTDYIHVRARRGQA 157
Query: 357 TDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMKL 416
TDSHSLAERVRRE+ISERM+ LQ+LVPGC+KVTGKA MLDEIINYVQSLQ+QVEFLSMK+
Sbjct: 158 TDSHSLAERVRRERISERMRYLQELVPGCDKVTGKAGMLDEIINYVQSLQKQVEFLSMKI 217
Query: 417 ASVNTRLELNV--DALMSKDIYQPNKP 441
A+ N + N+ D + + QP P
Sbjct: 218 AAANPVVNFNIVDDLFGGRRMSQPCGP 244
>gi|226496555|ref|NP_001150926.1| bHLH transcription factor GBOF-1 [Zea mays]
gi|195642998|gb|ACG40967.1| bHLH transcription factor GBOF-1 [Zea mays]
Length = 306
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 68/80 (85%), Positives = 76/80 (95%)
Query: 341 EPPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIIN 400
E PK YIHVRARRGQATDSHSLAERVRRE+ISERM++LQ LVPGC+KVTGKAL+LDEIIN
Sbjct: 112 EEPKGYIHVRARRGQATDSHSLAERVRRERISERMRVLQALVPGCDKVTGKALVLDEIIN 171
Query: 401 YVQSLQRQVEFLSMKLASVN 420
YVQSLQ QVEFLSMK+AS++
Sbjct: 172 YVQSLQNQVEFLSMKIASLS 191
>gi|357113290|ref|XP_003558437.1| PREDICTED: transcription factor bHLH74-like [Brachypodium
distachyon]
Length = 296
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 74/122 (60%), Positives = 93/122 (76%), Gaps = 8/122 (6%)
Query: 317 GNGAVKAEDEGDDKQAKANNAKPPEPPKDYIHVRARRGQATDSHSLAERVRREKISERMK 376
G GAV + +K A + + +DY+H+RA+RGQAT++HSLAER RREKI+ERMK
Sbjct: 91 GTGAVSKREVNSEKAGDAESNR-----EDYVHIRAKRGQATNNHSLAERFRREKINERMK 145
Query: 377 LLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMKLASVNTRLELNVDALMSKDIY 436
LQDLVPGCNK+TGKA+MLDEIINYVQSLQRQVEFLSMKL++V+ L ++D +DI
Sbjct: 146 HLQDLVPGCNKITGKAMMLDEIINYVQSLQRQVEFLSMKLSAVSPELNCDLDF---QDIL 202
Query: 437 QP 438
P
Sbjct: 203 CP 204
>gi|414591902|tpg|DAA42473.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 251
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 69/91 (75%), Positives = 77/91 (84%)
Query: 345 DYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQS 404
DYIHVRARRGQATDSHSLAER RREKISERMK+LQD+VPGCNKV GKA +LDEIINY+QS
Sbjct: 119 DYIHVRARRGQATDSHSLAERARREKISERMKVLQDIVPGCNKVIGKASVLDEIINYIQS 178
Query: 405 LQRQVEFLSMKLASVNTRLELNVDALMSKDI 435
LQRQVEFLSMKL ++N + A +KD
Sbjct: 179 LQRQVEFLSMKLEAINAHVSNATVAFPTKDF 209
>gi|414869720|tpg|DAA48277.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 252
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 77/137 (56%), Positives = 95/137 (69%), Gaps = 15/137 (10%)
Query: 299 ASESSKNKRCKPNEGKANGNGAVKAEDEGDDKQAKANNAKPP---------------EPP 343
A+ S ++ KP E A + A ED +++K+ K P E
Sbjct: 74 AAASPMERKRKPAEDSATLSSAQSKEDCKQQQESKSRRGKRPHNKEANTEEKSATEDEAT 133
Query: 344 KDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQ 403
+ YIHVRARRGQATDSHSLAERVRRE+ISERM++LQ LVPGC+KVTGKAL+LDEIINYVQ
Sbjct: 134 RGYIHVRARRGQATDSHSLAERVRRERISERMRMLQALVPGCDKVTGKALILDEIINYVQ 193
Query: 404 SLQRQVEFLSMKLASVN 420
SLQ QVEFLSM++AS++
Sbjct: 194 SLQNQVEFLSMRIASMS 210
>gi|115448177|ref|NP_001047868.1| Os02g0705500 [Oryza sativa Japonica Group]
gi|41053096|dbj|BAD08039.1| putative bHLH transcription factor [Oryza sativa Japonica Group]
gi|113537399|dbj|BAF09782.1| Os02g0705500 [Oryza sativa Japonica Group]
gi|215767339|dbj|BAG99567.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 361
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 71/94 (75%), Positives = 81/94 (86%), Gaps = 1/94 (1%)
Query: 345 DYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQS 404
DYIHVRARRGQATDSHSLAERVRRE+ISERM+ LQ+LVPGCNKVTGKA MLDEIINYVQS
Sbjct: 160 DYIHVRARRGQATDSHSLAERVRRERISERMRYLQELVPGCNKVTGKAGMLDEIINYVQS 219
Query: 405 LQRQVEFLSMKLASVNTRLELN-VDALMSKDIYQ 437
LQ+QVEFLSMK+A+ N + N V+ L + + Q
Sbjct: 220 LQKQVEFLSMKIAASNPVVNFNIVEDLFGRQLSQ 253
>gi|218192387|gb|EEC74814.1| hypothetical protein OsI_10634 [Oryza sativa Indica Group]
gi|222624516|gb|EEE58648.1| hypothetical protein OsJ_10029 [Oryza sativa Japonica Group]
Length = 307
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 71/95 (74%), Positives = 85/95 (89%), Gaps = 5/95 (5%)
Query: 344 KDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQ 403
++Y+HVRA+RGQAT+SHSLAER RREKI+ERMKLLQDLVPGCNK+TGKA+MLDEIINYVQ
Sbjct: 120 EEYVHVRAKRGQATNSHSLAERFRREKINERMKLLQDLVPGCNKITGKAMMLDEIINYVQ 179
Query: 404 SLQRQVEFLSMKLASV----NTRLELNVDALMSKD 434
SLQRQVEFLSMKL+++ N+ L+L D L S+D
Sbjct: 180 SLQRQVEFLSMKLSTISPELNSDLDLQ-DILCSQD 213
>gi|255645941|gb|ACU23459.1| unknown [Glycine max]
Length = 193
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 72/82 (87%), Positives = 75/82 (91%), Gaps = 1/82 (1%)
Query: 332 AKANNAKPPEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGK 391
A+ +N+K E P DYIHVRARRGQATDSHSLAERVRREKISERMK LQDLVPGCNKVTGK
Sbjct: 113 AETSNSKASEKP-DYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKVTGK 171
Query: 392 ALMLDEIINYVQSLQRQVEFLS 413
A MLDEIINYVQSLQRQVEFLS
Sbjct: 172 AGMLDEIINYVQSLQRQVEFLS 193
>gi|414865636|tpg|DAA44193.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 275
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 69/96 (71%), Positives = 84/96 (87%), Gaps = 2/96 (2%)
Query: 333 KANNAKPPEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKA 392
KA +A+ +DY+HVRA+RGQAT+SHSLAER RREKI+ERMKLLQDLVPGCNK+TGKA
Sbjct: 114 KAGDARAKR--EDYVHVRAKRGQATNSHSLAERFRREKINERMKLLQDLVPGCNKITGKA 171
Query: 393 LMLDEIINYVQSLQRQVEFLSMKLASVNTRLELNVD 428
+MLDEIINYVQSLQRQ+EFLSMKL+++ L ++D
Sbjct: 172 MMLDEIINYVQSLQRQIEFLSMKLSAIGPGLNCDLD 207
>gi|168024189|ref|XP_001764619.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684197|gb|EDQ70601.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 351
Score = 148 bits (374), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 69/95 (72%), Positives = 83/95 (87%), Gaps = 1/95 (1%)
Query: 338 KPPEPPKD-YIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLD 396
K +PPK +IHVRARRGQATD HSLAER RREKIS RMK LQ LVPGC++VTGKA+ML+
Sbjct: 138 KKEQPPKQGFIHVRARRGQATDGHSLAERARREKISNRMKFLQALVPGCSEVTGKAVMLE 197
Query: 397 EIINYVQSLQRQVEFLSMKLASVNTRLELNVDALM 431
EIINYV+SLQRQ+EFLSMKLA+V+ R++ NV+ L+
Sbjct: 198 EIINYVKSLQRQIEFLSMKLAAVDPRVDTNVEGLL 232
>gi|218191430|gb|EEC73857.1| hypothetical protein OsI_08622 [Oryza sativa Indica Group]
Length = 361
Score = 148 bits (374), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 71/94 (75%), Positives = 81/94 (86%), Gaps = 1/94 (1%)
Query: 345 DYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQS 404
DYIHVRARRGQATDSHSLAERVRRE+ISERM+ LQ+LVPGCNKVTGKA MLDEIINYVQS
Sbjct: 160 DYIHVRARRGQATDSHSLAERVRRERISERMRYLQELVPGCNKVTGKAGMLDEIINYVQS 219
Query: 405 LQRQVEFLSMKLASVNTRLELN-VDALMSKDIYQ 437
LQ+QVEFLSMK+A+ N + N V+ L + + Q
Sbjct: 220 LQKQVEFLSMKIAASNPVVNFNIVEDLFGRQLSQ 253
>gi|222623520|gb|EEE57652.1| hypothetical protein OsJ_08085 [Oryza sativa Japonica Group]
Length = 300
Score = 148 bits (373), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 70/94 (74%), Positives = 81/94 (86%), Gaps = 4/94 (4%)
Query: 345 DYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQS 404
DYIHVRARRGQATDSHSLAERVRRE+ISERM+ LQ+LVPGCNKVTGKA MLDEIINYVQS
Sbjct: 160 DYIHVRARRGQATDSHSLAERVRRERISERMRYLQELVPGCNKVTGKAGMLDEIINYVQS 219
Query: 405 LQRQVEFLSMKLASVNTRLELNVDALMSKDIYQP 438
LQ+QVEFLSMK+A+ N + N+ +D++ P
Sbjct: 220 LQKQVEFLSMKIAASNPVVNFNI----VEDLFGP 249
>gi|108707005|gb|ABF94800.1| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
Length = 809
Score = 148 bits (373), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 92/213 (43%), Positives = 120/213 (56%), Gaps = 54/213 (25%)
Query: 344 KDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQ 403
++Y+HVRA+RGQAT+SHSLAER RREKI+ERMKLLQDLVPGCNK+TGKA+MLDEIINYVQ
Sbjct: 623 EEYVHVRAKRGQATNSHSLAERFRREKINERMKLLQDLVPGCNKITGKAMMLDEIINYVQ 682
Query: 404 SLQRQVEFLSMKLASV----NTRLELNVDALMSKDIYQPNKPLPHSIFQIDSSASAFFSH 459
SLQRQVEFLSMKL+++ N+ L+L D L S+D + SAF
Sbjct: 683 SLQRQVEFLSMKLSTISPELNSDLDLQ-DILCSQD-----------------ARSAFLGC 724
Query: 460 QPQQN----------------PALHGNISNGTMTQCPVDPLDNALCRNLSMQLPQLEQFT 503
PQ + P L+G++ C +P D L R
Sbjct: 725 SPQLSNAHPNLYRAAQQCLSPPGLYGSV-------CVPNPADVHLAR---------AGHL 768
Query: 504 ETIPQFQNFGEDDLQSIVQMGFGQNPNSETSLQ 536
+ PQ ++L++I GF + +SL+
Sbjct: 769 ASFPQRGLIWNEELRNIAPAGFASDAAGTSSLE 801
>gi|115480081|ref|NP_001063634.1| Os09g0510500 [Oryza sativa Japonica Group]
gi|113631867|dbj|BAF25548.1| Os09g0510500 [Oryza sativa Japonica Group]
gi|125606291|gb|EAZ45327.1| hypothetical protein OsJ_29973 [Oryza sativa Japonica Group]
gi|215694666|dbj|BAG89857.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 282
Score = 148 bits (373), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 84/183 (45%), Positives = 117/183 (63%), Gaps = 8/183 (4%)
Query: 279 GKETAASPSV--NNTTKVAEANASESSKNKRCKPNE---GKANGNGAVKAEDEGDDKQAK 333
G T +P++ + + + + S ++K+ KP E N + +A++ G + K
Sbjct: 30 GAATTTAPAIPEDASMETSSVVLDTSPQDKKRKPREEDTASLNSAHSKEAKENGRKRGGK 89
Query: 334 --ANNAKPPEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGK 391
+ + E P+ +IHVRARRGQATDSHSLAERVRRE+ISERM++LQ LVPGC+KVTGK
Sbjct: 90 KHSRDQMEEEAPQGFIHVRARRGQATDSHSLAERVRRERISERMRMLQALVPGCDKVTGK 149
Query: 392 ALMLDEIINYVQSLQRQVEFLSMKLASVNTRLE-LNVDALMSKDIYQPNKPLPHSIFQID 450
AL+LDEIINYVQSLQ QVEFLSM++AS++ L +D+ D Q + + H I
Sbjct: 150 ALILDEIINYVQSLQNQVEFLSMRIASLSPVLYGFGIDSDAFSDHSQKMEGMFHEAVAIP 209
Query: 451 SSA 453
+S
Sbjct: 210 ASV 212
>gi|413938470|gb|AFW73021.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 340
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 70/98 (71%), Positives = 82/98 (83%), Gaps = 1/98 (1%)
Query: 345 DYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQS 404
DYIHVRARRGQATDSHSLAERVRRE+ISERM+ LQ+LVPGC+KVTGKA MLDEIINYVQS
Sbjct: 142 DYIHVRARRGQATDSHSLAERVRRERISERMRYLQELVPGCSKVTGKAGMLDEIINYVQS 201
Query: 405 LQRQVEFLSMKLASVNTRLELN-VDALMSKDIYQPNKP 441
LQ+QVEFLSMK+A+ N + + V+ L + + Q P
Sbjct: 202 LQKQVEFLSMKIAASNPVVSFDIVEDLFGRQLKQACGP 239
>gi|168024075|ref|XP_001764562.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684140|gb|EDQ70544.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 118
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 70/103 (67%), Positives = 87/103 (84%), Gaps = 1/103 (0%)
Query: 333 KANNAKPPEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKA 392
K N + P P + +IHVRARRGQAT+SHSLAER RREKIS RMK LQ LVPGC++VTGKA
Sbjct: 4 KVKNKEQP-PKQGFIHVRARRGQATNSHSLAERARREKISNRMKFLQALVPGCSEVTGKA 62
Query: 393 LMLDEIINYVQSLQRQVEFLSMKLASVNTRLELNVDALMSKDI 435
+ML+EIINYV+SLQRQ+EFLSMKLA+V+ RL+ NV+ L+ ++
Sbjct: 63 VMLEEIINYVKSLQRQIEFLSMKLAAVDPRLDTNVEGLLKMEV 105
>gi|108707003|gb|ABF94798.1| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
Length = 810
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 71/95 (74%), Positives = 85/95 (89%), Gaps = 5/95 (5%)
Query: 344 KDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQ 403
++Y+HVRA+RGQAT+SHSLAER RREKI+ERMKLLQDLVPGCNK+TGKA+MLDEIINYVQ
Sbjct: 623 EEYVHVRAKRGQATNSHSLAERFRREKINERMKLLQDLVPGCNKITGKAMMLDEIINYVQ 682
Query: 404 SLQRQVEFLSMKLASV----NTRLELNVDALMSKD 434
SLQRQVEFLSMKL+++ N+ L+L D L S+D
Sbjct: 683 SLQRQVEFLSMKLSTISPELNSDLDLQ-DILCSQD 716
>gi|224029073|gb|ACN33612.1| unknown [Zea mays]
gi|413938471|gb|AFW73022.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 350
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 70/98 (71%), Positives = 82/98 (83%), Gaps = 1/98 (1%)
Query: 345 DYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQS 404
DYIHVRARRGQATDSHSLAERVRRE+ISERM+ LQ+LVPGC+KVTGKA MLDEIINYVQS
Sbjct: 142 DYIHVRARRGQATDSHSLAERVRRERISERMRYLQELVPGCSKVTGKAGMLDEIINYVQS 201
Query: 405 LQRQVEFLSMKLASVNTRLELN-VDALMSKDIYQPNKP 441
LQ+QVEFLSMK+A+ N + + V+ L + + Q P
Sbjct: 202 LQKQVEFLSMKIAASNPVVSFDIVEDLFGRQLKQACGP 239
>gi|27311243|gb|AAO00689.1| Hypothetical protein [Oryza sativa Japonica Group]
Length = 776
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 71/95 (74%), Positives = 85/95 (89%), Gaps = 5/95 (5%)
Query: 344 KDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQ 403
++Y+HVRA+RGQAT+SHSLAER RREKI+ERMKLLQDLVPGCNK+TGKA+MLDEIINYVQ
Sbjct: 623 EEYVHVRAKRGQATNSHSLAERFRREKINERMKLLQDLVPGCNKITGKAMMLDEIINYVQ 682
Query: 404 SLQRQVEFLSMKLASV----NTRLELNVDALMSKD 434
SLQRQVEFLSMKL+++ N+ L+L D L S+D
Sbjct: 683 SLQRQVEFLSMKLSTISPELNSDLDLQ-DILCSQD 716
>gi|223702428|gb|ACN21645.1| putative basic helix-loop-helix protein BHLH8 [Lotus japonicus]
Length = 309
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 72/95 (75%), Positives = 81/95 (85%), Gaps = 3/95 (3%)
Query: 342 PPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINY 401
P YIHVRARRGQATDSHSLAERVRREKISERM +LQ LVPGC+KVTGKAL+L+EIINY
Sbjct: 112 PSTGYIHVRARRGQATDSHSLAERVRREKISERMNMLQQLVPGCDKVTGKALVLEEIINY 171
Query: 402 VQSLQRQVEFLSMKLASVNTRL---ELNVDALMSK 433
VQSLQ QVEFLSMKLASVN L +++D L+ +
Sbjct: 172 VQSLQHQVEFLSMKLASVNPMLFDMAMDLDNLLVR 206
>gi|147821091|emb|CAN75381.1| hypothetical protein VITISV_027596 [Vitis vinifera]
Length = 328
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 104/232 (44%), Positives = 126/232 (54%), Gaps = 58/232 (25%)
Query: 252 SQEESSVSEQVPNDFNSRKRKAVSKGKGKETAASPSVNNTTKVAEANASESSKNKRCK-P 310
S +ES+V+EQ + RKR+ VS S + +T+ + NAS + K + P
Sbjct: 66 SVDESTVTEQSGSRGGGRKRRDVSS-----EDESSKIVSTSSGSGMNASNGKRMKISRTP 120
Query: 311 NEGKANGNGAVKAEDEGDDKQAK--ANNAKPPEPPK-DYIHVRARRGQATDSHSLAERV- 366
+E NG KAE E + A +KP E K DYIHVRARRGQATDSHSLAERV
Sbjct: 121 DE-----NGGSKAELEASSVAGEKPAEESKPAEQSKQDYIHVRARRGQATDSHSLAERVM 175
Query: 367 -------------------------------------------RREKISERMKLLQDLVP 383
RREKISERMK+LQDLVP
Sbjct: 176 QFYTLLIFCFLVVPQMPKLKRIGLSWNSRSRCRCIGVSVYINARREKISERMKILQDLVP 235
Query: 384 GCNKVTGKALMLDEIINYVQSLQRQVEFLSMKLASVNTRLELNVDALMSKDI 435
GCNKV GKAL+LDEIINY+QSLQRQVEFLSMKL +VN+R+ V+ KD+
Sbjct: 236 GCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNHTVEGFPLKDL 287
>gi|168000495|ref|XP_001752951.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162695650|gb|EDQ81992.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 119
Score = 147 bits (370), Expect = 2e-32, Method: Composition-based stats.
Identities = 74/95 (77%), Positives = 88/95 (92%)
Query: 342 PPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINY 401
P + YIHVRARRGQATDSHSLAERVRREKISERMK LQDLVP C+KVTGKA+MLDEIINY
Sbjct: 18 PKQHYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPSCSKVTGKAVMLDEIINY 77
Query: 402 VQSLQRQVEFLSMKLASVNTRLELNVDALMSKDIY 436
VQSLQRQ+EFLSMKLA+V+ RL++N+ L++K+++
Sbjct: 78 VQSLQRQIEFLSMKLAAVDPRLDINLLNLLNKEVH 112
>gi|357137204|ref|XP_003570191.1| PREDICTED: uncharacterized protein LOC100822236 [Brachypodium
distachyon]
Length = 361
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 78/132 (59%), Positives = 93/132 (70%), Gaps = 10/132 (7%)
Query: 345 DYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQS 404
DYIHVRARRGQATDSHSLAERVRRE+ISERM+ LQ+LVPGC+KVTGKA MLDEIINYVQS
Sbjct: 157 DYIHVRARRGQATDSHSLAERVRRERISERMRYLQELVPGCDKVTGKAGMLDEIINYVQS 216
Query: 405 LQRQVEFLSMKLASVNTRLELNV--DALMSKDIYQPNKP----LPHSIF-QIDSSASAFF 457
LQ+QVEFLSMK+A+ N + ++ D + + Q P +P I Q+D+S
Sbjct: 217 LQKQVEFLSMKIAASNPVVNFDIVEDLFGGRRLGQACSPAAATMPMPIHGQMDTSC---L 273
Query: 458 SHQPQQNPALHG 469
Q PA G
Sbjct: 274 QMQQMHQPAAAG 285
>gi|357509815|ref|XP_003625196.1| Transcription factor bHLH60 [Medicago truncatula]
gi|124360133|gb|ABN08149.1| Helix-loop-helix DNA-binding [Medicago truncatula]
gi|355500211|gb|AES81414.1| Transcription factor bHLH60 [Medicago truncatula]
Length = 340
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 65/89 (73%), Positives = 79/89 (88%)
Query: 346 YIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSL 405
Y+HVR RRGQATDSHSLAER RREKI+ RMKLLQ+LVPGC K++G AL+LDEIIN+VQ+L
Sbjct: 170 YVHVRVRRGQATDSHSLAERARREKINARMKLLQELVPGCEKISGTALVLDEIINHVQTL 229
Query: 406 QRQVEFLSMKLASVNTRLELNVDALMSKD 434
QRQVE LSMKLA+VN R++ N+D L++ D
Sbjct: 230 QRQVEILSMKLAAVNPRIDFNLDRLLAAD 258
>gi|356504821|ref|XP_003521193.1| PREDICTED: transcription factor bHLH48-like [Glycine max]
Length = 372
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 64/89 (71%), Positives = 81/89 (91%)
Query: 346 YIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSL 405
Y+HVR RRGQATDSHSLAER RREKI+ RMKLLQ+LVPGC+K++G A++LDEIIN+VQSL
Sbjct: 203 YVHVRVRRGQATDSHSLAERARREKINARMKLLQELVPGCDKISGTAMVLDEIINHVQSL 262
Query: 406 QRQVEFLSMKLASVNTRLELNVDALMSKD 434
QRQVE LSMKLA+VN R++ ++D+L++ D
Sbjct: 263 QRQVEILSMKLAAVNPRIDFSLDSLLATD 291
>gi|363808336|ref|NP_001242250.1| transcription factor bHLH48-like [Glycine max]
gi|256002927|gb|ACU52707.1| bHLH transcription factor PTF1 [Glycine max]
Length = 366
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 64/89 (71%), Positives = 81/89 (91%)
Query: 346 YIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSL 405
Y+HVR RRGQATDSHSLAER RREKI+ RMKLLQ+LVPGC+K++G A++LDEIIN+VQSL
Sbjct: 197 YVHVRVRRGQATDSHSLAERARREKINARMKLLQELVPGCDKISGTAMVLDEIINHVQSL 256
Query: 406 QRQVEFLSMKLASVNTRLELNVDALMSKD 434
QRQVE LSMKLA+VN R++ ++D+L++ D
Sbjct: 257 QRQVEILSMKLAAVNPRIDFSLDSLLATD 285
>gi|226495537|ref|NP_001141393.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
gi|194704318|gb|ACF86243.1| unknown [Zea mays]
gi|413923610|gb|AFW63542.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 342
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 76/133 (57%), Positives = 94/133 (70%), Gaps = 7/133 (5%)
Query: 345 DYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQS 404
DYIHVRARRGQATDSHSLAERVRRE+ISERM+ LQ+LVPGC+KVTGKA MLDEIINYVQS
Sbjct: 139 DYIHVRARRGQATDSHSLAERVRRERISERMRYLQELVPGCSKVTGKAGMLDEIINYVQS 198
Query: 405 LQRQVEFLSMKLASVNTRLELN-VDALMSKDIYQPNKPLPHSIFQIDSSASAF------F 457
LQ+QVEFLSMK+A+ N + + V+ L + + Q + ++ + A
Sbjct: 199 LQKQVEFLSMKIAASNPVVSFDIVEDLFGRQLKQSRRSPAAALPAMALPAGQLEPSCLQM 258
Query: 458 SHQPQQNPALHGN 470
SH PQ +P+ N
Sbjct: 259 SHMPQMHPSAAAN 271
>gi|326519344|dbj|BAJ96671.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 279
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 79/126 (62%), Positives = 95/126 (75%), Gaps = 8/126 (6%)
Query: 302 SSKNKRCKPNEGK-ANGNGAVKAEDE------GDDKQAKANNAKPPEPPKDYIHVRARRG 354
+S K+ KP E A+ N A E + G KQ K A+ E PK YIHVRARRG
Sbjct: 52 ASMEKKRKPKEDTTASLNSAHSKETKESTRKRGGKKQDK-ETAEEEEEPKGYIHVRARRG 110
Query: 355 QATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSM 414
QATDSHSL+ERVRRE+ISERM++LQ LVPGC+KVTGKAL+LDEIINYV+SLQ QVEFLSM
Sbjct: 111 QATDSHSLSERVRRERISERMRMLQSLVPGCDKVTGKALILDEIINYVRSLQNQVEFLSM 170
Query: 415 KLASVN 420
++AS++
Sbjct: 171 RIASLS 176
>gi|308080104|ref|NP_001183737.1| uncharacterized protein LOC100502330 [Zea mays]
gi|238014262|gb|ACR38166.1| unknown [Zea mays]
gi|413921691|gb|AFW61623.1| putative HLH DNA-binding domain superfamily protein isoform 1 [Zea
mays]
gi|413921692|gb|AFW61624.1| putative HLH DNA-binding domain superfamily protein isoform 2 [Zea
mays]
Length = 319
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 79/139 (56%), Positives = 98/139 (70%), Gaps = 8/139 (5%)
Query: 283 AASPSVNNTTKVAEANASESS-KNKRCKPNEGKANGNGAVKAEDEGDDKQAKANNAKPPE 341
+ASP AE +A+ SS + K CK G + E ++K + + E
Sbjct: 71 SASPMERKRKATAEDSAAISSPQPKDCKQESKSRRGK---RPRKETEEKSSTDED----E 123
Query: 342 PPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINY 401
K YIHVRARRGQATDSHSLAERVRRE+ISERM++LQ LVPGC+KVTGKA++LDEIINY
Sbjct: 124 ASKGYIHVRARRGQATDSHSLAERVRRERISERMRMLQALVPGCDKVTGKAMVLDEIINY 183
Query: 402 VQSLQRQVEFLSMKLASVN 420
VQSLQ QVEFLSM++AS++
Sbjct: 184 VQSLQNQVEFLSMRIASMS 202
>gi|413923609|gb|AFW63541.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 316
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 76/133 (57%), Positives = 94/133 (70%), Gaps = 7/133 (5%)
Query: 345 DYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQS 404
DYIHVRARRGQATDSHSLAERVRRE+ISERM+ LQ+LVPGC+KVTGKA MLDEIINYVQS
Sbjct: 139 DYIHVRARRGQATDSHSLAERVRRERISERMRYLQELVPGCSKVTGKAGMLDEIINYVQS 198
Query: 405 LQRQVEFLSMKLASVNTRLELN-VDALMSKDIYQPNKPLPHSIFQIDSSASAF------F 457
LQ+QVEFLSMK+A+ N + + V+ L + + Q + ++ + A
Sbjct: 199 LQKQVEFLSMKIAASNPVVSFDIVEDLFGRQLKQSRRSPAAALPAMALPAGQLEPSCLQM 258
Query: 458 SHQPQQNPALHGN 470
SH PQ +P+ N
Sbjct: 259 SHMPQMHPSAAAN 271
>gi|125526611|gb|EAY74725.1| hypothetical protein OsI_02616 [Oryza sativa Indica Group]
Length = 467
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 156/446 (34%), Positives = 193/446 (43%), Gaps = 116/446 (26%)
Query: 131 ASCYTTPLNSPPKLNLPMSLGNSMPLNSSVAEFSADPGFAERAARFSRFGSRSFNGRSTG 190
ASCY+TP+ SP K + P+ S +A +AD AERAAR S + G
Sbjct: 89 ASCYSTPVGSPCK------PAPAPPVPSLLA--AADAMIAERAARMSCLAAAGHGG---- 136
Query: 191 QFVPNHNPDQFGLSRSNNNPNPMTANEKLPRVSSSPSLKVLGSQAQATGNKSPQDRSELA 250
KL R +SS SL L A A G +L
Sbjct: 137 --------------------------GKLSRAASSQSL--LAEPAAAGGVH------QLP 162
Query: 251 NSQEESSVSEQVPNDFNSRKRKA-VSKGKGKETA-----------ASP--SVNNTTKVAE 296
S SS D SRKRKA SK +GK+ A ASP S T+
Sbjct: 163 ASDGSSS-------DAPSRKRKAPGSKARGKDAATSIAKVLPLLSASPLQSQRRTSPETM 215
Query: 297 ANASES----SKNKRC------------KPNEGKA--NGNGAVKAEDEGDDKQAKANNAK 338
N +S +K K+C KP G A GNG K D
Sbjct: 216 VNFPQSPEPGTKAKKCKLSADAAGDEDTKPVAGDAGHGGNGKGKVLDAAG---------- 265
Query: 339 PPEPPKDYIHVRARRGQATDSHSLAERVRREKISERMK--------LLQDLVPGCN--KV 388
EPPKDYIHVRARRGQATDSHSLAERV + + D + +V
Sbjct: 266 --EPPKDYIHVRARRGQATDSHSLAERVNTAGVYAAIHNFVFSSILAFADAIAAVFHLQV 323
Query: 389 TGKALMLDEIINYVQSLQRQVEFLSMKLASVNTRLELNVDALMSKDIYQPNKPLPHSIFQ 448
TGKA+MLDEIINYVQSLQRQVEFLSMKL++VN +L+ +VD + KD N P +
Sbjct: 324 TGKAVMLDEIINYVQSLQRQVEFLSMKLSTVNPQLDFDVDNFIPKDA---NDPSMPAPLS 380
Query: 449 IDSSASAFFSHQPQQNPALHGNISNGTMTQCPVDP---LDNA--LCRNLSMQLPQLEQFT 503
+ +P + S GT Q V L+ A + + +P L+ F
Sbjct: 381 LPPPPPPLSYSPEGASPGICYASSQGTAMQSVVTSTKHLETAPTFANHHVIPVPSLDGFH 440
Query: 504 ETIPQFQN-FGEDDLQSIVQMGFGQN 528
Q + EDDLQS+VQMGF N
Sbjct: 441 SAHSQAGSCMWEDDLQSVVQMGFRGN 466
>gi|413923611|gb|AFW63543.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 352
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 76/133 (57%), Positives = 94/133 (70%), Gaps = 7/133 (5%)
Query: 345 DYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQS 404
DYIHVRARRGQATDSHSLAERVRRE+ISERM+ LQ+LVPGC+KVTGKA MLDEIINYVQS
Sbjct: 139 DYIHVRARRGQATDSHSLAERVRRERISERMRYLQELVPGCSKVTGKAGMLDEIINYVQS 198
Query: 405 LQRQVEFLSMKLASVNTRLELN-VDALMSKDIYQPNKPLPHSIFQIDSSASAF------F 457
LQ+QVEFLSMK+A+ N + + V+ L + + Q + ++ + A
Sbjct: 199 LQKQVEFLSMKIAASNPVVSFDIVEDLFGRQLKQSRRSPAAALPAMALPAGQLEPSCLQM 258
Query: 458 SHQPQQNPALHGN 470
SH PQ +P+ N
Sbjct: 259 SHMPQMHPSAAAN 271
>gi|30695836|ref|NP_850745.1| transcription factor bHLH60 [Arabidopsis thaliana]
gi|6729523|emb|CAB67608.1| putative protein [Arabidopsis thaliana]
gi|22655000|gb|AAM98091.1| AT3g57800/T10K17_10 [Arabidopsis thaliana]
gi|27764962|gb|AAO23602.1| AT3g57800/T10K17_10 [Arabidopsis thaliana]
gi|332646182|gb|AEE79703.1| transcription factor bHLH60 [Arabidopsis thaliana]
Length = 379
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 64/89 (71%), Positives = 80/89 (89%)
Query: 346 YIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSL 405
Y+HVRARRGQATDSHSLAER RREKI+ RMKLLQ+LVPGC+K+ G AL+LDEIIN+VQSL
Sbjct: 201 YVHVRARRGQATDSHSLAERARREKINARMKLLQELVPGCDKIQGTALVLDEIINHVQSL 260
Query: 406 QRQVEFLSMKLASVNTRLELNVDALMSKD 434
QRQVE LSM+LA+VN R++ N+D +++ +
Sbjct: 261 QRQVEMLSMRLAAVNPRIDFNLDTILASE 289
>gi|20127060|gb|AAM10949.1|AF488593_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 379
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 64/89 (71%), Positives = 80/89 (89%)
Query: 346 YIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSL 405
Y+HVRARRGQATDSHSLAER RREKI+ RMKLLQ+LVPGC+K+ G AL+LDEIIN+VQSL
Sbjct: 201 YVHVRARRGQATDSHSLAERARREKINARMKLLQELVPGCDKIQGTALVLDEIINHVQSL 260
Query: 406 QRQVEFLSMKLASVNTRLELNVDALMSKD 434
QRQVE LSM+LA+VN R++ N+D +++ +
Sbjct: 261 QRQVEMLSMRLAAVNPRIDFNLDTILASE 289
>gi|312281897|dbj|BAJ33814.1| unnamed protein product [Thellungiella halophila]
Length = 375
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 64/89 (71%), Positives = 80/89 (89%)
Query: 346 YIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSL 405
Y+HVRARRGQATDSHSLAER RREKI+ RMKLLQ+LVPGC+K+ G AL+LDEIIN+VQSL
Sbjct: 197 YVHVRARRGQATDSHSLAERARREKINARMKLLQELVPGCDKIQGTALVLDEIINHVQSL 256
Query: 406 QRQVEFLSMKLASVNTRLELNVDALMSKD 434
QRQVE LSM+LA+VN R++ N+D +++ +
Sbjct: 257 QRQVEMLSMRLAAVNPRIDFNLDTILASE 285
>gi|30688981|ref|NP_850368.1| transcription factor bHLH48 [Arabidopsis thaliana]
gi|75304461|sp|Q8VZ02.1|BH048_ARATH RecName: Full=Transcription factor bHLH48; AltName: Full=Basic
helix-loop-helix protein 48; Short=AtbHLH48; Short=bHLH
48; AltName: Full=Transcription factor EN 97; AltName:
Full=bHLH transcription factor bHLH048
gi|17529250|gb|AAL38852.1| unknown protein [Arabidopsis thaliana]
gi|20465971|gb|AAM20171.1| unknown protein [Arabidopsis thaliana]
gi|51971465|dbj|BAD44397.1| putative bHLH transcription factor (bHLH048) [Arabidopsis thaliana]
gi|330255008|gb|AEC10102.1| transcription factor bHLH48 [Arabidopsis thaliana]
Length = 327
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 72/120 (60%), Positives = 93/120 (77%), Gaps = 10/120 (8%)
Query: 346 YIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSL 405
Y+HVRARRGQATD+HSLAER RREKI+ RMKLLQ+LVPGC+K+ G AL+LDEIIN+VQ+L
Sbjct: 182 YVHVRARRGQATDNHSLAERARREKINARMKLLQELVPGCDKIQGTALVLDEIINHVQTL 241
Query: 406 QRQVEFLSMKLASVNTRLELNVDALMSKDIYQPNKPLPHSIFQIDSSASAFFSHQPQQNP 465
QRQVE LSM+LA+VN R++ N+D++++ + N L +D S +A HQ QQ P
Sbjct: 242 QRQVEMLSMRLAAVNPRIDFNLDSILASE----NGSL------MDGSFNAESYHQLQQWP 291
>gi|297824189|ref|XP_002879977.1| hypothetical protein ARALYDRAFT_483321 [Arabidopsis lyrata subsp.
lyrata]
gi|297325816|gb|EFH56236.1| hypothetical protein ARALYDRAFT_483321 [Arabidopsis lyrata subsp.
lyrata]
Length = 326
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 64/89 (71%), Positives = 81/89 (91%)
Query: 346 YIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSL 405
Y+HVRARRGQATD+HSLAER RREKI+ RMKLLQ+LVPGC+K+ G AL+LDEIIN+VQSL
Sbjct: 181 YVHVRARRGQATDNHSLAERARREKINARMKLLQELVPGCDKIQGTALVLDEIINHVQSL 240
Query: 406 QRQVEFLSMKLASVNTRLELNVDALMSKD 434
QRQVE LSM+LA+VN R+E N+D++++ +
Sbjct: 241 QRQVEMLSMRLAAVNPRVEFNLDSILASE 269
>gi|357130181|ref|XP_003566729.1| PREDICTED: uncharacterized protein LOC100831834 [Brachypodium
distachyon]
Length = 298
Score = 145 bits (366), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 72/96 (75%), Positives = 79/96 (82%), Gaps = 2/96 (2%)
Query: 341 EPPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIIN 400
E P YIHVRA+RGQA DSHSLAERVRREKISE+M LLQ LVPGC+KVTGKA+MLDEII+
Sbjct: 149 EAPAGYIHVRAKRGQARDSHSLAERVRREKISEKMLLLQSLVPGCDKVTGKAMMLDEIIS 208
Query: 401 YVQSLQRQVEFLSMKLASVNTRL--ELNVDALMSKD 434
YVQSLQ QVEFLSMKLAS+N + E VD M D
Sbjct: 209 YVQSLQNQVEFLSMKLASLNPMMMYEFGVDIGMYPD 244
>gi|242062782|ref|XP_002452680.1| hypothetical protein SORBIDRAFT_04g030530 [Sorghum bicolor]
gi|241932511|gb|EES05656.1| hypothetical protein SORBIDRAFT_04g030530 [Sorghum bicolor]
Length = 359
Score = 144 bits (364), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 66/83 (79%), Positives = 76/83 (91%)
Query: 345 DYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQS 404
DYIHVRARRGQATDSHSLAERVRRE+ISERM+ LQ+LVPGC+KVTGKA MLDEIINYVQS
Sbjct: 149 DYIHVRARRGQATDSHSLAERVRRERISERMRYLQELVPGCSKVTGKAGMLDEIINYVQS 208
Query: 405 LQRQVEFLSMKLASVNTRLELNV 427
LQ+QVEFLSMK+A+ N + ++
Sbjct: 209 LQKQVEFLSMKIAASNPVVSFDI 231
>gi|119655907|gb|ABL86246.1| BHLHogu [Brassica rapa subsp. chinensis]
Length = 122
Score = 144 bits (364), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 64/90 (71%), Positives = 81/90 (90%)
Query: 346 YIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSL 405
Y+HVRARRGQATDSHSLAER RREKI+ RMKLL++LVPGC+K+ G AL+LDEIIN+VQSL
Sbjct: 30 YVHVRARRGQATDSHSLAERARREKINARMKLLRELVPGCDKIQGTALVLDEIINHVQSL 89
Query: 406 QRQVEFLSMKLASVNTRLELNVDALMSKDI 435
QRQVE LSM+LA+VN R++ N+D L++ ++
Sbjct: 90 QRQVEMLSMRLAAVNPRIDFNLDTLLASEV 119
>gi|51969310|dbj|BAD43347.1| putative bHLH transcription factor (bHLH048) [Arabidopsis thaliana]
gi|51970180|dbj|BAD43782.1| putative bHLH transcription factor (bHLH048) [Arabidopsis thaliana]
Length = 327
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 71/120 (59%), Positives = 92/120 (76%), Gaps = 10/120 (8%)
Query: 346 YIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSL 405
Y+HVRARRGQATD+HSLAER RREKI+ RMKLLQ+LVPGC+K+ G L+LDEIIN+VQ+L
Sbjct: 182 YVHVRARRGQATDNHSLAERARREKINARMKLLQELVPGCDKIQGTGLVLDEIINHVQTL 241
Query: 406 QRQVEFLSMKLASVNTRLELNVDALMSKDIYQPNKPLPHSIFQIDSSASAFFSHQPQQNP 465
QRQVE LSM+LA+VN R++ N+D++++ + N L +D S +A HQ QQ P
Sbjct: 242 QRQVEMLSMRLAAVNPRIDFNLDSILASE----NGSL------MDGSFNAESYHQLQQWP 291
>gi|449450566|ref|XP_004143033.1| PREDICTED: transcription factor bHLH49-like [Cucumis sativus]
Length = 341
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 67/104 (64%), Positives = 84/104 (80%)
Query: 328 DDKQAKANNAKPPEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNK 387
D K+AK + P ++YIHV+ARRG+A ++HSLAERVRREKISERMKLLQ LVPGC++
Sbjct: 184 DSKKAKGGSQNVQAPKENYIHVQARRGRAANNHSLAERVRREKISERMKLLQQLVPGCHQ 243
Query: 388 VTGKALMLDEIINYVQSLQRQVEFLSMKLASVNTRLELNVDALM 431
+TGK ++LDEIINYVQSLQ+QVEFLSMKLASV L + ++
Sbjct: 244 ITGKTVVLDEIINYVQSLQQQVEFLSMKLASVGLESSLEAEQIL 287
>gi|219362473|ref|NP_001136461.1| uncharacterized protein LOC100216572 [Zea mays]
gi|194695798|gb|ACF81983.1| unknown [Zea mays]
Length = 366
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 66/76 (86%), Positives = 73/76 (96%)
Query: 345 DYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQS 404
DYIHVRARRGQATDSHSLAERVRRE+ISERM+ LQ+LVPGC+KVTGKA MLDEIINYVQS
Sbjct: 142 DYIHVRARRGQATDSHSLAERVRRERISERMRYLQELVPGCSKVTGKAGMLDEIINYVQS 201
Query: 405 LQRQVEFLSMKLASVN 420
LQ+QVEFLSMK+A+ N
Sbjct: 202 LQKQVEFLSMKIAASN 217
>gi|294462391|gb|ADE76744.1| unknown [Picea sitchensis]
Length = 222
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 66/84 (78%), Positives = 76/84 (90%)
Query: 344 KDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQ 403
KDYIH+R+RRGQAT+SHSLAERVRREKISERMK+LQDLVPGCNKVTGKAL+L+ IINYVQ
Sbjct: 107 KDYIHLRSRRGQATNSHSLAERVRREKISERMKVLQDLVPGCNKVTGKALVLENIINYVQ 166
Query: 404 SLQRQVEFLSMKLASVNTRLELNV 427
SLQ QVE LS+KL SV +R ++
Sbjct: 167 SLQSQVEILSVKLTSVLSRCHFDL 190
>gi|413956455|gb|AFW89104.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 239
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 69/89 (77%), Positives = 78/89 (87%), Gaps = 4/89 (4%)
Query: 344 KDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQ 403
+DY HVRA+RGQAT+SHSLAER RREKI+ RMKLLQDLVPGCNK+TGKA+MLDEIINYVQ
Sbjct: 149 EDYAHVRAKRGQATNSHSLAERFRREKINVRMKLLQDLVPGCNKITGKAMMLDEIINYVQ 208
Query: 404 SLQRQVEFLSMKLASV----NTRLELNVD 428
SLQRQVEFLSMKL+++ N LEL D
Sbjct: 209 SLQRQVEFLSMKLSAIRPGFNRDLELQDD 237
>gi|224066981|ref|XP_002302310.1| hypothetical protein POPTRDRAFT_754747 [Populus trichocarpa]
gi|222844036|gb|EEE81583.1| hypothetical protein POPTRDRAFT_754747 [Populus trichocarpa]
Length = 309
Score = 141 bits (356), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 69/82 (84%), Positives = 74/82 (90%), Gaps = 4/82 (4%)
Query: 329 DKQAKANNAKPPEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKV 388
D Q KAN+ +PP+DYIHVRAR+GQATDSHSL ERVRREKISERMKLLQ+LVPGCNKV
Sbjct: 116 DIQNKANS----KPPEDYIHVRARKGQATDSHSLVERVRREKISERMKLLQNLVPGCNKV 171
Query: 389 TGKALMLDEIINYVQSLQRQVE 410
TGKA MLDEIINYVQSLQRQVE
Sbjct: 172 TGKAFMLDEIINYVQSLQRQVE 193
>gi|449520908|ref|XP_004167474.1| PREDICTED: transcription factor bHLH49-like [Cucumis sativus]
Length = 341
Score = 141 bits (355), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 66/104 (63%), Positives = 83/104 (79%)
Query: 328 DDKQAKANNAKPPEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNK 387
D K+AK + P ++YIHV+ARRG+A ++HSLAERVRREKISERMKLLQ LVPGC++
Sbjct: 184 DSKKAKGGSQNVQAPKENYIHVQARRGRAANNHSLAERVRREKISERMKLLQQLVPGCHQ 243
Query: 388 VTGKALMLDEIINYVQSLQRQVEFLSMKLASVNTRLELNVDALM 431
+TGK ++LDEIINYVQSLQ+QVE LSMKLASV L + ++
Sbjct: 244 ITGKTVVLDEIINYVQSLQQQVELLSMKLASVGLESSLEAEQIL 287
>gi|413956454|gb|AFW89103.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 263
Score = 141 bits (355), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 68/86 (79%), Positives = 77/86 (89%), Gaps = 4/86 (4%)
Query: 344 KDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQ 403
+DY HVRA+RGQAT+SHSLAER RREKI+ RMKLLQDLVPGCNK+TGKA+MLDEIINYVQ
Sbjct: 149 EDYAHVRAKRGQATNSHSLAERFRREKINVRMKLLQDLVPGCNKITGKAMMLDEIINYVQ 208
Query: 404 SLQRQVEFLSMKLASV----NTRLEL 425
SLQRQVEFLSMKL+++ N LEL
Sbjct: 209 SLQRQVEFLSMKLSAIRPGFNRDLEL 234
>gi|356498448|ref|XP_003518064.1| PREDICTED: transcription factor bHLH48-like [Glycine max]
Length = 354
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 63/93 (67%), Positives = 80/93 (86%)
Query: 346 YIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSL 405
Y+HVR RRGQATDSHSLAER RREKI+ RMKLLQ+LVPGCNK++G AL+LD+IIN+VQSL
Sbjct: 185 YVHVRVRRGQATDSHSLAERARREKINARMKLLQELVPGCNKISGTALVLDKIINHVQSL 244
Query: 406 QRQVEFLSMKLASVNTRLELNVDALMSKDIYQP 438
Q +VE LSMKLA+VN ++ N+D+L++ + P
Sbjct: 245 QNEVEILSMKLAAVNPVIDFNLDSLLATEGVTP 277
>gi|356534621|ref|XP_003535851.1| PREDICTED: transcription factor bHLH48-like [Glycine max]
Length = 357
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 63/93 (67%), Positives = 80/93 (86%)
Query: 346 YIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSL 405
Y+HVR RRGQATDSHSLAER RREKI+ RMKLLQ+LVPGCNK++G AL+LD+IIN+VQSL
Sbjct: 189 YVHVRVRRGQATDSHSLAERARREKINARMKLLQELVPGCNKISGTALVLDKIINHVQSL 248
Query: 406 QRQVEFLSMKLASVNTRLELNVDALMSKDIYQP 438
Q +VE LSMKLA+VN ++ N+D+L++ + P
Sbjct: 249 QNEVEILSMKLAAVNPVIDFNLDSLLATEGVTP 281
>gi|295913280|gb|ADG57897.1| transcription factor [Lycoris longituba]
Length = 176
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 64/90 (71%), Positives = 83/90 (92%), Gaps = 1/90 (1%)
Query: 346 YIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSL 405
Y+HVRARRGQATDSHSLAER RREKI+ RMKLLQ+LVPGC+K++G AL+LDEIIN+VQSL
Sbjct: 4 YVHVRARRGQATDSHSLAERARREKINARMKLLQELVPGCSKISGTALVLDEIINHVQSL 63
Query: 406 QRQVEFLSMKLASVNTRLELN-VDALMSKD 434
QR+VEFLSM+LA+VN R++ + +D+++S +
Sbjct: 64 QREVEFLSMRLAAVNPRIDFSGLDSILSSE 93
>gi|357440189|ref|XP_003590372.1| Transcription factor BEE [Medicago truncatula]
gi|355479420|gb|AES60623.1| Transcription factor BEE [Medicago truncatula]
Length = 326
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 61/89 (68%), Positives = 79/89 (88%)
Query: 346 YIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSL 405
Y+HVR RRGQATDSHSLAER RREKI+ RMKLLQ+LVPGCNK++G AL+LD+IIN+VQSL
Sbjct: 157 YVHVRVRRGQATDSHSLAERARREKINARMKLLQELVPGCNKISGTALVLDKIINHVQSL 216
Query: 406 QRQVEFLSMKLASVNTRLELNVDALMSKD 434
Q +VE LSMKLA+VN ++ N+D++++ +
Sbjct: 217 QHEVEILSMKLAAVNPIIDFNLDSILAAE 245
>gi|357117653|ref|XP_003560578.1| PREDICTED: transcription factor bHLH48-like [Brachypodium
distachyon]
Length = 259
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 68/116 (58%), Positives = 90/116 (77%), Gaps = 2/116 (1%)
Query: 320 AVKAEDEGDDKQAKANNAKPPEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQ 379
A + D D+ +K E P Y+HVRARRGQATDSHSLAER RREKI+ RM+LL+
Sbjct: 52 AKRKADHAADRASKDAGGGEDEKPA-YVHVRARRGQATDSHSLAERARREKINARMELLK 110
Query: 380 DLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMKLASVNTRLEL-NVDALMSKD 434
+LVPGC+KV+G AL+LDEIIN+VQSLQRQVE+LSM+LA+VN R++ +D+ ++ +
Sbjct: 111 ELVPGCSKVSGTALVLDEIINHVQSLQRQVEYLSMRLAAVNPRVDFGGLDSFLTSE 166
>gi|449439405|ref|XP_004137476.1| PREDICTED: transcription factor BEE 3-like [Cucumis sativus]
gi|449531561|ref|XP_004172754.1| PREDICTED: transcription factor BEE 3-like [Cucumis sativus]
Length = 278
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 68/127 (53%), Positives = 90/127 (70%), Gaps = 5/127 (3%)
Query: 318 NGAVKAEDEGDDKQAKANNAKPPEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKL 377
NG + G +K++K + E P++ +HVRARRGQATDSHS+AER+RR KI+ER++
Sbjct: 122 NGINTKNNNGKEKRSKKGDTNDGEKPREVVHVRARRGQATDSHSVAERIRRGKINERLRC 181
Query: 378 LQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMKLASVNTRLELNVDA-----LMS 432
LQD+VPGC K G A+MLDEIINYVQSLQ QVEFLSMKL + ++ + N D+ L
Sbjct: 182 LQDIVPGCYKTMGMAVMLDEIINYVQSLQNQVEFLSMKLTAASSYHDFNSDSDAEDKLKG 241
Query: 433 KDIYQPN 439
K+I + N
Sbjct: 242 KEIREGN 248
>gi|4567302|gb|AAD23713.1| unknown protein [Arabidopsis thaliana]
Length = 226
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 63/98 (64%), Positives = 83/98 (84%), Gaps = 8/98 (8%)
Query: 346 YIHVRARRGQATDSHSLAERV--------RREKISERMKLLQDLVPGCNKVTGKALMLDE 397
Y+HVRARRGQATD+HSLAERV RREKI+ RMKLLQ+LVPGC+K+ G AL+LDE
Sbjct: 126 YVHVRARRGQATDNHSLAERVIHNLTDMARREKINARMKLLQELVPGCDKIQGTALVLDE 185
Query: 398 IINYVQSLQRQVEFLSMKLASVNTRLELNVDALMSKDI 435
IIN+VQ+LQRQVE LSM+LA+VN R++ N+D++++ ++
Sbjct: 186 IINHVQTLQRQVEMLSMRLAAVNPRIDFNLDSILASEV 223
>gi|413954819|gb|AFW87468.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 372
Score = 139 bits (349), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 72/128 (56%), Positives = 94/128 (73%), Gaps = 17/128 (13%)
Query: 312 EGKANGNGAVKAED----EGDDKQAKANNAKPPEPPKDYIHVRARRGQATDSHSLAERVR 367
+GKA G E +GDD+ KP Y+HVRARRGQATDSHSLAER R
Sbjct: 164 QGKAAKKGKTAEEKLAGGDGDDE-------KP-----AYVHVRARRGQATDSHSLAERAR 211
Query: 368 REKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMKLASVNTRLEL-N 426
REKI+ RM+LL++LVPGC+KV+G AL+LDEIIN+VQSLQRQVE+LSM+LA+VN R++
Sbjct: 212 REKINARMELLKELVPGCSKVSGTALVLDEIINHVQSLQRQVEYLSMRLAAVNPRVDFGG 271
Query: 427 VDALMSKD 434
+D+ ++ +
Sbjct: 272 LDSFLTTE 279
>gi|413954820|gb|AFW87469.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 359
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 62/90 (68%), Positives = 81/90 (90%), Gaps = 1/90 (1%)
Query: 346 YIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSL 405
Y+HVRARRGQATDSHSLAER RREKI+ RM+LL++LVPGC+KV+G AL+LDEIIN+VQSL
Sbjct: 177 YVHVRARRGQATDSHSLAERARREKINARMELLKELVPGCSKVSGTALVLDEIINHVQSL 236
Query: 406 QRQVEFLSMKLASVNTRLEL-NVDALMSKD 434
QRQVE+LSM+LA+VN R++ +D+ ++ +
Sbjct: 237 QRQVEYLSMRLAAVNPRVDFGGLDSFLTTE 266
>gi|225455954|ref|XP_002276500.1| PREDICTED: transcription factor BEE 3 [Vitis vinifera]
gi|297734215|emb|CBI15462.3| unnamed protein product [Vitis vinifera]
Length = 265
Score = 138 bits (347), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 65/102 (63%), Positives = 78/102 (76%)
Query: 327 GDDKQAKANNAKPPEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCN 386
G K+A + K E P++ +HVRARRGQATDSHSLAERVRR KI+ER++ LQD+VPGC
Sbjct: 125 GRGKRAMKSIEKEDEKPREVVHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCY 184
Query: 387 KVTGKALMLDEIINYVQSLQRQVEFLSMKLASVNTRLELNVD 428
K G A+MLDEIINYVQSLQ QVEFLSMKL + + + N D
Sbjct: 185 KTMGMAVMLDEIINYVQSLQNQVEFLSMKLTAASQYYDFNSD 226
>gi|224118802|ref|XP_002317910.1| predicted protein [Populus trichocarpa]
gi|222858583|gb|EEE96130.1| predicted protein [Populus trichocarpa]
Length = 273
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 62/86 (72%), Positives = 72/86 (83%)
Query: 343 PKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYV 402
PKD +HVRARRGQATDSHSLAERVRR KI+ER++ LQD+VPGC K G A+MLDEIINYV
Sbjct: 150 PKDVVHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMAVMLDEIINYV 209
Query: 403 QSLQRQVEFLSMKLASVNTRLELNVD 428
QSLQ QVEFLSMKL + +T + N +
Sbjct: 210 QSLQNQVEFLSMKLTAASTFYDFNAE 235
>gi|116830915|gb|ABK28414.1| unknown [Arabidopsis thaliana]
Length = 224
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 65/104 (62%), Positives = 80/104 (76%)
Query: 334 ANNAKPPEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKAL 393
A N + PKD +HVRA+RGQATDSHSLAERVRREKI+ER+K LQDLVPGC K G A+
Sbjct: 89 AMNGDETQKPKDVVHVRAKRGQATDSHSLAERVRREKINERLKCLQDLVPGCYKAMGMAV 148
Query: 394 MLDEIINYVQSLQRQVEFLSMKLASVNTRLELNVDALMSKDIYQ 437
MLD II+YV+SLQ Q+EFLSMKL++ + +LN + DI+Q
Sbjct: 149 MLDVIIDYVRSLQNQIEFLSMKLSAASACYDLNSLDIEPTDIFQ 192
>gi|18395643|ref|NP_564229.1| transcription factor bHLH75 [Arabidopsis thaliana]
gi|218563498|sp|A4D998.1|BH075_ARATH RecName: Full=Transcription factor bHLH75; AltName: Full=Basic
helix-loop-helix protein 75; Short=AtbHLH75; Short=bHLH
75; AltName: Full=Transcription factor EN 78; AltName:
Full=bHLH transcription factor bHLH075
gi|21618141|gb|AAM67191.1| helix-loop-helix protein homolog, putative [Arabidopsis thaliana]
gi|51969656|dbj|BAD43520.1| putative bHLH transcription factor (bHLH075) [Arabidopsis thaliana]
gi|91805851|gb|ABE65654.1| basic helix-loop-helix family protein [Arabidopsis thaliana]
gi|332192486|gb|AEE30607.1| transcription factor bHLH75 [Arabidopsis thaliana]
Length = 223
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 65/104 (62%), Positives = 80/104 (76%)
Query: 334 ANNAKPPEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKAL 393
A N + PKD +HVRA+RGQATDSHSLAERVRREKI+ER+K LQDLVPGC K G A+
Sbjct: 89 AMNGDETQKPKDVVHVRAKRGQATDSHSLAERVRREKINERLKCLQDLVPGCYKAMGMAV 148
Query: 394 MLDEIINYVQSLQRQVEFLSMKLASVNTRLELNVDALMSKDIYQ 437
MLD II+YV+SLQ Q+EFLSMKL++ + +LN + DI+Q
Sbjct: 149 MLDVIIDYVRSLQNQIEFLSMKLSAASACYDLNSLDIEPTDIFQ 192
>gi|11761480|gb|AAG28811.2|AC079374_14 helix-loop-helix protein homolog, putative [Arabidopsis thaliana]
Length = 166
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 65/104 (62%), Positives = 80/104 (76%)
Query: 334 ANNAKPPEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKAL 393
A N + PKD +HVRA+RGQATDSHSLAERVRREKI+ER+K LQDLVPGC K G A+
Sbjct: 32 AMNGDETQKPKDVVHVRAKRGQATDSHSLAERVRREKINERLKCLQDLVPGCYKAMGMAV 91
Query: 394 MLDEIINYVQSLQRQVEFLSMKLASVNTRLELNVDALMSKDIYQ 437
MLD II+YV+SLQ Q+EFLSMKL++ + +LN + DI+Q
Sbjct: 92 MLDVIIDYVRSLQNQIEFLSMKLSAASACYDLNSLDIEPTDIFQ 135
>gi|147802826|emb|CAN64154.1| hypothetical protein VITISV_000192 [Vitis vinifera]
Length = 270
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 69/106 (65%), Positives = 83/106 (78%), Gaps = 5/106 (4%)
Query: 343 PKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYV 402
P ++HVRARRG+ATDSHSLAER RREKISERMKLLQ LVPGC+K+ GK L+LDEIINYV
Sbjct: 102 PSGFVHVRARRGEATDSHSLAERARREKISERMKLLQSLVPGCDKIIGKTLVLDEIINYV 161
Query: 403 QSLQRQVEFLSMKLASVNTRL---ELNVDA--LMSKDIYQPNKPLP 443
+SLQ QVEFL KLAS++ L E N+D+ L S+++ PLP
Sbjct: 162 KSLQNQVEFLVGKLASISPMLIGHEANLDSNTLQSENLCSFGPPLP 207
>gi|218198545|gb|EEC80972.1| hypothetical protein OsI_23697 [Oryza sativa Indica Group]
Length = 286
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 61/80 (76%), Positives = 75/80 (93%)
Query: 346 YIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSL 405
Y+HVRARRGQATDSHSLAER RREKI+ RM+LL++LVPGC+KV+G AL+LDEIIN+VQSL
Sbjct: 104 YVHVRARRGQATDSHSLAERARREKINARMELLKELVPGCSKVSGTALVLDEIINHVQSL 163
Query: 406 QRQVEFLSMKLASVNTRLEL 425
QRQVE+LSM+LA+VN R++
Sbjct: 164 QRQVEYLSMRLAAVNPRVDF 183
>gi|222635879|gb|EEE66011.1| hypothetical protein OsJ_21966 [Oryza sativa Japonica Group]
Length = 325
Score = 136 bits (342), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 61/80 (76%), Positives = 75/80 (93%)
Query: 346 YIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSL 405
Y+HVRARRGQATDSHSLAER RREKI+ RM+LL++LVPGC+KV+G AL+LDEIIN+VQSL
Sbjct: 143 YVHVRARRGQATDSHSLAERARREKINARMELLKELVPGCSKVSGTALVLDEIINHVQSL 202
Query: 406 QRQVEFLSMKLASVNTRLEL 425
QRQVE+LSM+LA+VN R++
Sbjct: 203 QRQVEYLSMRLAAVNPRVDF 222
>gi|390979908|gb|AFM30926.1| basic helix-loop-helix, partial [Vitis vinifera]
Length = 270
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 69/106 (65%), Positives = 83/106 (78%), Gaps = 5/106 (4%)
Query: 343 PKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYV 402
P ++HVRARRG+ATDSHSLAER RREKISERMKLLQ LVPGC+K+ GK L+LDEIINYV
Sbjct: 102 PSGFVHVRARRGEATDSHSLAERARREKISERMKLLQSLVPGCDKLIGKTLVLDEIINYV 161
Query: 403 QSLQRQVEFLSMKLASVNTRL---ELNVDA--LMSKDIYQPNKPLP 443
+SLQ QVEFL KLAS++ L E N+D+ L S+++ PLP
Sbjct: 162 KSLQNQVEFLVGKLASISPMLIGHEANLDSSTLQSENLCSFGPPLP 207
>gi|255582765|ref|XP_002532159.1| DNA binding protein, putative [Ricinus communis]
gi|223528169|gb|EEF30233.1| DNA binding protein, putative [Ricinus communis]
Length = 190
Score = 135 bits (340), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 64/92 (69%), Positives = 75/92 (81%), Gaps = 2/92 (2%)
Query: 341 EPPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIIN 400
E PK+ +HVRARRGQATDSHSLAERVRR KI+ER++ LQD+VPGC K G A+MLDEIIN
Sbjct: 65 EKPKEVVHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMAVMLDEIIN 124
Query: 401 YVQSLQRQVEFLSMKLASVNTRLELN--VDAL 430
YVQSLQ QVEFLSMKL + +T + N DA+
Sbjct: 125 YVQSLQNQVEFLSMKLTAASTFYDFNSETDAI 156
>gi|413943655|gb|AFW76304.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 370
Score = 135 bits (340), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 62/90 (68%), Positives = 80/90 (88%), Gaps = 1/90 (1%)
Query: 346 YIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSL 405
Y+HVRARRGQATDSHSLAER RREKI+ RM+LL++LVPGC+KV+G AL+LDEIIN+VQSL
Sbjct: 154 YVHVRARRGQATDSHSLAERARREKINARMELLKELVPGCSKVSGTALVLDEIINHVQSL 213
Query: 406 QRQVEFLSMKLASVNTRLEL-NVDALMSKD 434
QRQVE+LSM+LA+VN R + +D+ ++ +
Sbjct: 214 QRQVEYLSMRLATVNPRGDFGGLDSFLTTE 243
>gi|225425220|ref|XP_002267465.1| PREDICTED: transcription factor bHLH76-like [Vitis vinifera]
Length = 270
Score = 135 bits (339), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 68/106 (64%), Positives = 82/106 (77%), Gaps = 5/106 (4%)
Query: 343 PKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYV 402
P ++HVRARRG+ATDSHSLAER RREKISERMK LQ LVPGC+K+ GK L+LDEIINYV
Sbjct: 102 PSGFVHVRARRGEATDSHSLAERARREKISERMKFLQSLVPGCDKIIGKTLVLDEIINYV 161
Query: 403 QSLQRQVEFLSMKLASVNTRL---ELNVDA--LMSKDIYQPNKPLP 443
+SLQ QVEFL KLAS++ L E N+D+ L S+++ PLP
Sbjct: 162 KSLQNQVEFLVGKLASISPMLIGHEANLDSSTLQSENLCSFGPPLP 207
>gi|225424017|ref|XP_002279412.1| PREDICTED: transcription factor bHLH75 [Vitis vinifera]
Length = 258
Score = 134 bits (338), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 66/112 (58%), Positives = 84/112 (75%), Gaps = 5/112 (4%)
Query: 320 AVKAEDEGDDK-----QAKANNAKPPEPPKDYIHVRARRGQATDSHSLAERVRREKISER 374
A +E GD+K + K +N + P++ IHVRA+RGQATDSHSLAERVRREKI+E+
Sbjct: 106 ASGSEFLGDNKNLGGRKRKRSNERENNKPREVIHVRAKRGQATDSHSLAERVRREKINEK 165
Query: 375 MKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMKLASVNTRLELN 426
++ LQDLVPGC K G A+MLD IINYVQSLQ Q+EFLSMKL++ +T + N
Sbjct: 166 LRCLQDLVPGCYKTMGMAVMLDVIINYVQSLQNQIEFLSMKLSAASTFYDFN 217
>gi|297737801|emb|CBI27002.3| unnamed protein product [Vitis vinifera]
Length = 241
Score = 134 bits (338), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 66/112 (58%), Positives = 84/112 (75%), Gaps = 5/112 (4%)
Query: 320 AVKAEDEGDDK-----QAKANNAKPPEPPKDYIHVRARRGQATDSHSLAERVRREKISER 374
A +E GD+K + K +N + P++ IHVRA+RGQATDSHSLAERVRREKI+E+
Sbjct: 89 ASGSEFLGDNKNLGGRKRKRSNERENNKPREVIHVRAKRGQATDSHSLAERVRREKINEK 148
Query: 375 MKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMKLASVNTRLELN 426
++ LQDLVPGC K G A+MLD IINYVQSLQ Q+EFLSMKL++ +T + N
Sbjct: 149 LRCLQDLVPGCYKTMGMAVMLDVIINYVQSLQNQIEFLSMKLSAASTFYDFN 200
>gi|147773703|emb|CAN76460.1| hypothetical protein VITISV_010828 [Vitis vinifera]
Length = 237
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 66/112 (58%), Positives = 84/112 (75%), Gaps = 5/112 (4%)
Query: 320 AVKAEDEGDDK-----QAKANNAKPPEPPKDYIHVRARRGQATDSHSLAERVRREKISER 374
A +E GD+K + K +N + P++ IHVRA+RGQATDSHSLAERVRREKI+E+
Sbjct: 85 ASGSEFLGDNKNLGGRKRKRSNERENNKPREVIHVRAKRGQATDSHSLAERVRREKINEK 144
Query: 375 MKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMKLASVNTRLELN 426
++ LQDLVPGC K G A+MLD IINYVQSLQ Q+EFLSMKL++ +T + N
Sbjct: 145 LRCLQDLVPGCYKTMGMAVMLDVIINYVQSLQNQIEFLSMKLSAASTFYDFN 196
>gi|224135389|ref|XP_002322061.1| predicted protein [Populus trichocarpa]
gi|222869057|gb|EEF06188.1| predicted protein [Populus trichocarpa]
Length = 270
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 69/131 (52%), Positives = 92/131 (70%), Gaps = 5/131 (3%)
Query: 298 NASESSKNKRCKPNEGKANGNGAVKAEDEGDDKQAKANNAKPPEPPKDYIHVRARRGQAT 357
+ SESS C + + + +G+ K + K+ K+N + + ++ +HVRARRGQAT
Sbjct: 111 DVSESS----CMNSYPRVSESGSKKRKSSRRGKRVKSNEEEEEKT-REVVHVRARRGQAT 165
Query: 358 DSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMKLA 417
DSHSLAERVRR KI+ER++ LQD+VPGC K G A+MLDEIINYVQSLQ QVEFLSMKL
Sbjct: 166 DSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMAVMLDEIINYVQSLQNQVEFLSMKLT 225
Query: 418 SVNTRLELNVD 428
+ +T + N +
Sbjct: 226 AASTFYDFNAE 236
>gi|296088166|emb|CBI35658.3| unnamed protein product [Vitis vinifera]
Length = 204
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 68/106 (64%), Positives = 82/106 (77%), Gaps = 5/106 (4%)
Query: 343 PKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYV 402
P ++HVRARRG+ATDSHSLAER RREKISERMK LQ LVPGC+K+ GK L+LDEIINYV
Sbjct: 36 PSGFVHVRARRGEATDSHSLAERARREKISERMKFLQSLVPGCDKIIGKTLVLDEIINYV 95
Query: 403 QSLQRQVEFLSMKLASVNTRL---ELNVDA--LMSKDIYQPNKPLP 443
+SLQ QVEFL KLAS++ L E N+D+ L S+++ PLP
Sbjct: 96 KSLQNQVEFLVGKLASISPMLIGHEANLDSSTLQSENLCSFGPPLP 141
>gi|449439537|ref|XP_004137542.1| PREDICTED: transcription factor BEE 3-like [Cucumis sativus]
gi|449532109|ref|XP_004173026.1| PREDICTED: transcription factor BEE 3-like [Cucumis sativus]
Length = 265
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 62/103 (60%), Positives = 80/103 (77%)
Query: 327 GDDKQAKANNAKPPEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCN 386
G K+ K+ + + ++ +HVRARRGQATDSHSLAERVRR KI+ER++ L+D+VPGC
Sbjct: 126 GKGKRLKSLEKEEEKSTREVVHVRARRGQATDSHSLAERVRRGKINERLRCLKDIVPGCY 185
Query: 387 KVTGKALMLDEIINYVQSLQRQVEFLSMKLASVNTRLELNVDA 429
K G A+MLDEIINYVQSLQ QVEFLSMKLA+ ++ + N +A
Sbjct: 186 KTMGMAVMLDEIINYVQSLQNQVEFLSMKLAAASSFYDFNSEA 228
>gi|297839255|ref|XP_002887509.1| hypothetical protein ARALYDRAFT_476520 [Arabidopsis lyrata subsp.
lyrata]
gi|297333350|gb|EFH63768.1| hypothetical protein ARALYDRAFT_476520 [Arabidopsis lyrata subsp.
lyrata]
Length = 263
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 67/119 (56%), Positives = 83/119 (69%), Gaps = 5/119 (4%)
Query: 316 NGNGAVKAEDEGDDKQAKANNAKPPEPPKDYIHVRARRGQATDSHSLAERVRREKISERM 375
NGN K ++ K + + E ++ +HVRARRGQATDSHS+AERVRR KI+ER+
Sbjct: 119 NGNSLTK---NNSSRRGKRSKNREEEKDREVVHVRARRGQATDSHSIAERVRRGKINERL 175
Query: 376 KLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMKLASVNTRLELN--VDALMS 432
K LQD+VPGC K G A MLDEIINYVQSLQ QVEFLSMKL + ++ + N DA+ S
Sbjct: 176 KCLQDIVPGCYKTMGMATMLDEIINYVQSLQNQVEFLSMKLTAASSYYDFNSETDAVES 234
>gi|168050670|ref|XP_001777781.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162670882|gb|EDQ57443.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 67
Score = 133 bits (334), Expect = 3e-28, Method: Composition-based stats.
Identities = 62/67 (92%), Positives = 64/67 (95%)
Query: 344 KDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQ 403
+DYIHVRARRGQATDSHSLAERVRREKISERMK LQDLVPGC KVTGKA+MLDEIINYVQ
Sbjct: 1 QDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCKKVTGKAVMLDEIINYVQ 60
Query: 404 SLQRQVE 410
LQRQVE
Sbjct: 61 FLQRQVE 67
>gi|295913282|gb|ADG57898.1| transcription factor [Lycoris longituba]
Length = 206
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 67/106 (63%), Positives = 86/106 (81%), Gaps = 6/106 (5%)
Query: 332 AKANNAKPPEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNK--VT 389
A+ NN P Y+HVRARRGQATDSHSLAER RREKI+ RMKLLQ+LVPGC+K ++
Sbjct: 18 AEENNGGEKLP---YVHVRARRGQATDSHSLAERARREKINARMKLLQELVPGCSKGQIS 74
Query: 390 GKALMLDEIINYVQSLQRQVEFLSMKLASVNTRLELN-VDALMSKD 434
G AL+LD+IIN+VQSLQRQVEFLSM+LA+V R++ + +D ++S +
Sbjct: 75 GTALVLDKIINHVQSLQRQVEFLSMRLAAVTPRIDFSGLDNILSSE 120
>gi|356529573|ref|XP_003533364.1| PREDICTED: transcription factor BEE 3-like [Glycine max]
Length = 273
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 65/106 (61%), Positives = 80/106 (75%), Gaps = 3/106 (2%)
Query: 327 GDDKQAKANNAKPPEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCN 386
G K+ K+N E K+ +HVRARRGQATDSHSLAERVRR KI+E+++ LQ++VPGC
Sbjct: 135 GRGKRVKSN-VTEEEKAKEVVHVRARRGQATDSHSLAERVRRGKINEKLRCLQNIVPGCY 193
Query: 387 KVTGKALMLDEIINYVQSLQRQVEFLSMKLASVNTRLELN--VDAL 430
K G A+MLDEIINYVQSLQ QVEFLS+KL + +T + N DAL
Sbjct: 194 KTMGMAVMLDEIINYVQSLQHQVEFLSLKLTAASTFYDFNSETDAL 239
>gi|238005608|gb|ACR33839.1| unknown [Zea mays]
gi|413938469|gb|AFW73020.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 246
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 59/67 (88%), Positives = 64/67 (95%)
Query: 345 DYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQS 404
DYIHVRARRGQATDSHSLAERVRRE+ISERM+ LQ+LVPGC+KVTGKA MLDEIINYVQS
Sbjct: 142 DYIHVRARRGQATDSHSLAERVRRERISERMRYLQELVPGCSKVTGKAGMLDEIINYVQS 201
Query: 405 LQRQVEF 411
LQ+QVE
Sbjct: 202 LQKQVEV 208
>gi|356520601|ref|XP_003528950.1| PREDICTED: transcription factor BEE 3-like [Glycine max]
Length = 272
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 65/106 (61%), Positives = 80/106 (75%), Gaps = 3/106 (2%)
Query: 327 GDDKQAKANNAKPPEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCN 386
G K+ K+N E K+ +HVRARRGQATDSHSLAERVRR KI+E+++ LQ++VPGC
Sbjct: 134 GRGKRVKSN-VTEEEKAKEVVHVRARRGQATDSHSLAERVRRGKINEKLRCLQNIVPGCY 192
Query: 387 KVTGKALMLDEIINYVQSLQRQVEFLSMKLASVNTRLELN--VDAL 430
K G A+MLDEIINYVQSLQ QVEFLS+KL + +T + N DAL
Sbjct: 193 KTMGMAVMLDEIINYVQSLQHQVEFLSLKLTAASTFYDFNSETDAL 238
>gi|356527821|ref|XP_003532505.1| PREDICTED: transcription factor BEE 3-like [Glycine max]
Length = 252
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 62/100 (62%), Positives = 79/100 (79%), Gaps = 1/100 (1%)
Query: 327 GDDKQAKANNAKPPEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCN 386
G K+ K N+ + +P + +HVRA+RGQATDSHSLAERVRR KI+E+++ LQ++VPGC
Sbjct: 112 GRGKRVKRNSIEDKKP-NEVVHVRAKRGQATDSHSLAERVRRGKINEKLRCLQNIVPGCY 170
Query: 387 KVTGKALMLDEIINYVQSLQRQVEFLSMKLASVNTRLELN 426
K G A+MLDEIINYVQSLQ QVEFLSMKL + +T +LN
Sbjct: 171 KTMGMAIMLDEIINYVQSLQHQVEFLSMKLTAASTYYDLN 210
>gi|414591362|tpg|DAA41933.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 384
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 89/191 (46%), Positives = 105/191 (54%), Gaps = 44/191 (23%)
Query: 264 NDFNSRKRKAVSKGKGKE--TAASPSVNNTTKVAEANASESSKNKRCKPNEGKANGNGAV 321
+D RKRKA S GK K+ T A+P +A+ + + +E ++GNG
Sbjct: 204 SDGPCRKRKA-SGGKAKDVVTTATPKSREPETMAKRRKLSTDAAR----DEAGSHGNG-- 256
Query: 322 KAEDEGDDKQAKANNAKPPEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDL 381
K+ P+PPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDL
Sbjct: 257 ------KGKEVAPAAEPEPQPPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDL 310
Query: 382 VPGCN-----------------------------KVTGKALMLDEIINYVQSLQRQVEFL 412
VPGC+ KVTGKA+MLDEIINYVQSLQ QVE
Sbjct: 311 VPGCSKVSKHRRPLLKIRLKTHAYFNFQRLLDLVKVTGKAVMLDEIINYVQSLQCQVEVR 370
Query: 413 SMKLASVNTRL 423
+ L S + L
Sbjct: 371 AYDLHSALSAL 381
>gi|223702430|gb|ACN21646.1| putative basic helix-loop-helix protein BHLH5 [Lotus japonicus]
gi|388495576|gb|AFK35854.1| unknown [Lotus japonicus]
Length = 268
Score = 128 bits (322), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 77/158 (48%), Positives = 95/158 (60%), Gaps = 26/158 (16%)
Query: 269 RKRKAVSKGKGKETAASPSVNNTTKVAEANASESSKNKRCKPNEGKANGNGAVKAEDEGD 328
RKRKA + + S N+T V+E+ SK K C G K E +
Sbjct: 98 RKRKATN------MSGPSSANSTPSVSES----ESKIKNCS-----GRGKRVKKNMMEEE 142
Query: 329 DKQAKANNAKPPEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKV 388
DK++ +HVRARRGQATDSHSLAERVRR KI+E++K LQ++VPGC K
Sbjct: 143 DKKST-----------QVVHVRARRGQATDSHSLAERVRRGKINEKLKCLQNIVPGCYKT 191
Query: 389 TGKALMLDEIINYVQSLQRQVEFLSMKLASVNTRLELN 426
G A+MLDEIINYVQSLQ QVEFLSMKL + +T + N
Sbjct: 192 MGMAIMLDEIINYVQSLQHQVEFLSMKLTAASTFYDFN 229
>gi|334183900|ref|NP_001185394.1| transcription factor BEE 3 [Arabidopsis thaliana]
gi|332197393|gb|AEE35514.1| transcription factor BEE 3 [Arabidopsis thaliana]
Length = 260
Score = 128 bits (322), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 77/167 (46%), Positives = 105/167 (62%), Gaps = 19/167 (11%)
Query: 260 EQVPNDFNSRKRKAVSKGKGKETAASPSVNNTTKVAEANASESSKNKRCKPNEGKANGNG 319
E+ + F+++KRK++ + A S S N+ V++ S SS + NGN
Sbjct: 77 EESSSQFDTKKRKSLME------AVSTSENS---VSDQTLSTSSA-------QVSINGNI 120
Query: 320 AVKAEDEGDDKQAKANNAKPPEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQ 379
+ K ++ K + + E ++ +HVRARRGQATDSHS+AERVRR KI+ER+K LQ
Sbjct: 121 STK---NNSSRRGKRSKNREEEKEREVVHVRARRGQATDSHSIAERVRRGKINERLKCLQ 177
Query: 380 DLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMKLASVNTRLELN 426
D+VPGC K G A MLDEIINYVQSLQ QVEFLSMKL + ++ + N
Sbjct: 178 DIVPGCYKTMGMATMLDEIINYVQSLQNQVEFLSMKLTAASSYYDFN 224
>gi|30698967|ref|NP_177524.2| transcription factor BEE 3 [Arabidopsis thaliana]
gi|75299562|sp|Q8GWK7.1|BEE3_ARATH RecName: Full=Transcription factor BEE 3; AltName: Full=Basic
helix-loop-helix protein 50; Short=AtbHLH50; Short=bHLH
50; AltName: Full=Protein Brassinosteroid enhanced
expression 3; AltName: Full=Transcription factor EN 76;
AltName: Full=bHLH transcription factor bHLH050
gi|26452579|dbj|BAC43374.1| putative bHLH transcription factor bHLH050 [Arabidopsis thaliana]
gi|29824159|gb|AAP04040.1| putative helix-loop-helix DNA-binding protein [Arabidopsis
thaliana]
gi|332197392|gb|AEE35513.1| transcription factor BEE 3 [Arabidopsis thaliana]
Length = 261
Score = 128 bits (322), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 58/79 (73%), Positives = 66/79 (83%)
Query: 348 HVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQR 407
HVRARRGQATDSHS+AERVRR KI+ER+K LQD+VPGC K G A MLDEIINYVQSLQ
Sbjct: 146 HVRARRGQATDSHSIAERVRRGKINERLKCLQDIVPGCYKTMGMATMLDEIINYVQSLQN 205
Query: 408 QVEFLSMKLASVNTRLELN 426
QVEFLSMKL + ++ + N
Sbjct: 206 QVEFLSMKLTAASSYYDFN 224
>gi|30685840|ref|NP_173276.2| transcription factor BEE 1 [Arabidopsis thaliana]
gi|75299631|sp|Q8GZ13.1|BEE1_ARATH RecName: Full=Transcription factor BEE 1; AltName: Full=Basic
helix-loop-helix protein 44; Short=AtbHLH44; Short=bHLH
44; AltName: Full=Protein Brassinosteroid enhanced
expression 1; AltName: Full=Transcription factor EN 77;
AltName: Full=bHLH transcription factor bHLH044
gi|26449635|dbj|BAC41942.1| putative bHLH transcription factor bHLH044 [Arabidopsis thaliana]
gi|28950817|gb|AAO63332.1| At1g18400 [Arabidopsis thaliana]
gi|34391437|gb|AAN18283.1| putative bHLH transcription factor [Arabidopsis thaliana]
gi|332191590|gb|AEE29711.1| transcription factor BEE 1 [Arabidopsis thaliana]
Length = 260
Score = 128 bits (321), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 58/80 (72%), Positives = 67/80 (83%)
Query: 347 IHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQ 406
+HVRARRGQATDSHSLAERVRR KI+ER++ LQD+VPGC K G A MLDEIINYVQSLQ
Sbjct: 143 VHVRARRGQATDSHSLAERVRRGKINERLRCLQDMVPGCYKAMGMATMLDEIINYVQSLQ 202
Query: 407 RQVEFLSMKLASVNTRLELN 426
QVEFLSMKL + ++ + N
Sbjct: 203 NQVEFLSMKLTAASSFYDFN 222
>gi|224072488|ref|XP_002303756.1| predicted protein [Populus trichocarpa]
gi|222841188|gb|EEE78735.1| predicted protein [Populus trichocarpa]
Length = 230
Score = 128 bits (321), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 58/80 (72%), Positives = 67/80 (83%)
Query: 332 AKANNAKPPEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGK 391
AK P EPP Y+HVRARRG+ATDSHSLAERVRREKIS RMKLLQ LVPGC+K+TGK
Sbjct: 144 AKKQKKVPVEPPTGYVHVRARRGEATDSHSLAERVRREKISSRMKLLQSLVPGCDKITGK 203
Query: 392 ALMLDEIINYVQSLQRQVEF 411
AL+LDEII+YVQ L+ +V+
Sbjct: 204 ALVLDEIISYVQFLKDRVQV 223
>gi|12324208|gb|AAG52074.1|AC012679_12 putative helix-loop-helix DNA-binding protein; 87971-89290
[Arabidopsis thaliana]
Length = 250
Score = 128 bits (321), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 58/79 (73%), Positives = 66/79 (83%)
Query: 348 HVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQR 407
HVRARRGQATDSHS+AERVRR KI+ER+K LQD+VPGC K G A MLDEIINYVQSLQ
Sbjct: 135 HVRARRGQATDSHSIAERVRRGKINERLKCLQDIVPGCYKTMGMATMLDEIINYVQSLQN 194
Query: 408 QVEFLSMKLASVNTRLELN 426
QVEFLSMKL + ++ + N
Sbjct: 195 QVEFLSMKLTAASSYYDFN 213
>gi|356513103|ref|XP_003525253.1| PREDICTED: transcription factor BEE 3-like [Glycine max]
Length = 246
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 61/100 (61%), Positives = 77/100 (77%), Gaps = 1/100 (1%)
Query: 327 GDDKQAKANNAKPPEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCN 386
G K+ K N + +P + +HVRA+RGQATDSHSLAERVRR KI+E+++ LQ++VPGC
Sbjct: 106 GRGKRVKRNMIEDKKP-NEVVHVRAKRGQATDSHSLAERVRRGKINEKLRCLQNIVPGCY 164
Query: 387 KVTGKALMLDEIINYVQSLQRQVEFLSMKLASVNTRLELN 426
K G A+MLDEIINYVQSLQ QVEFLSMKL + +T + N
Sbjct: 165 KTMGMAIMLDEIINYVQSLQHQVEFLSMKLNAASTYYDFN 204
>gi|218194642|gb|EEC77069.1| hypothetical protein OsI_15464 [Oryza sativa Indica Group]
Length = 403
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 68/121 (56%), Positives = 81/121 (66%), Gaps = 22/121 (18%)
Query: 340 PEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEII 399
PEP KDYIHVR RE+ISERMKLLQ LVPGCNK+TGKALMLDEII
Sbjct: 195 PEPAKDYIHVR-----------------RERISERMKLLQSLVPGCNKITGKALMLDEII 237
Query: 400 NYVQSLQRQVEFLSMKLASVNTRLELNVDALMSKDI-YQPNKPLPHSIFQIDSSASAFFS 458
NYVQSLQRQVEFLSMKLA++N +L+ + + SKD+ + P P S D + + FS
Sbjct: 238 NYVQSLQRQVEFLSMKLATMNPQLDFDSHYMPSKDMSHMPVPAYPSS----DPTTTTAFS 293
Query: 459 H 459
+
Sbjct: 294 Y 294
>gi|255586626|ref|XP_002533944.1| DNA binding protein, putative [Ricinus communis]
gi|223526075|gb|EEF28430.1| DNA binding protein, putative [Ricinus communis]
Length = 267
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 58/87 (66%), Positives = 73/87 (83%)
Query: 347 IHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQ 406
IHVRA+RGQATDSHS+AERVRREKI+ +++ LQDLVPGC+K G A+ML+EIINYV SLQ
Sbjct: 147 IHVRAKRGQATDSHSIAERVRREKINNKLRCLQDLVPGCHKSMGMAVMLEEIINYVHSLQ 206
Query: 407 RQVEFLSMKLASVNTRLELNVDALMSK 433
QVEFLSM+LA+ + +LN++ SK
Sbjct: 207 NQVEFLSMELAAASCSYDLNLETESSK 233
>gi|6714300|gb|AAF25996.1|AC013354_15 F15H18.11 [Arabidopsis thaliana]
Length = 1154
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 58/80 (72%), Positives = 67/80 (83%)
Query: 347 IHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQ 406
+HVRARRGQATDSHSLAERVRR KI+ER++ LQD+VPGC K G A MLDEIINYVQSLQ
Sbjct: 1037 VHVRARRGQATDSHSLAERVRRGKINERLRCLQDMVPGCYKAMGMATMLDEIINYVQSLQ 1096
Query: 407 RQVEFLSMKLASVNTRLELN 426
QVEFLSMKL + ++ + N
Sbjct: 1097 NQVEFLSMKLTAASSFYDFN 1116
>gi|224101643|ref|XP_002312365.1| predicted protein [Populus trichocarpa]
gi|222852185|gb|EEE89732.1| predicted protein [Populus trichocarpa]
Length = 168
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 82/183 (44%), Positives = 109/183 (59%), Gaps = 19/183 (10%)
Query: 375 MKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMKLASVNTRLELNVDALMSKD 434
MK LQDLVPGC+KVTGKA+MLDEIINYVQSLQRQVEFLSMKLA+VN RL+LN++ L++KD
Sbjct: 1 MKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDLNIEGLLAKD 60
Query: 435 IYQPNKPLPHSIFQIDSSASAFFSHQPQQNPALHGNISNGTMTQCP-VDPLDNALCRNLS 493
I Q + + S+ AF P P H + + T P ++ + +CR ++
Sbjct: 61 ILQ--------LHAVPPSSLAFSLEMPMAYPPSHPSQAGLIPTAFPGMNNHSDIICRTIN 112
Query: 494 MQL-PQLEQFTETIPQFQNFGEDDLQSIVQMGFGQNPNSETSLQSQSFHGSNQAP--HMK 550
QL P F E Q N +D+L+++VQM + ETS S + P H+K
Sbjct: 113 SQLTPMTAGFKEPA-QLPNVWDDELRNVVQMSY------ETSAPHDSQDVNKPLPPGHLK 165
Query: 551 AEL 553
EL
Sbjct: 166 VEL 168
>gi|224127674|ref|XP_002329336.1| predicted protein [Populus trichocarpa]
gi|222870790|gb|EEF07921.1| predicted protein [Populus trichocarpa]
Length = 265
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 62/112 (55%), Positives = 84/112 (75%), Gaps = 1/112 (0%)
Query: 315 ANGNGAVKAEDEGDDKQAKANNAKPPEPPKDYIHVRARRGQATDSHSLAERVRREKISER 374
A+ N K + G K+ + N K + ++ IHVRA+RGQATDSHS+AERVRREKI+ +
Sbjct: 115 ASTNETKKKNNLGGSKKGE-NKEKEGDKAEEVIHVRAKRGQATDSHSIAERVRREKINNK 173
Query: 375 MKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMKLASVNTRLELN 426
++ LQDLVPGC++ G A+ML+EIINYV SLQ QVEFLSM+LA+ ++ +LN
Sbjct: 174 LRCLQDLVPGCHRSMGMAVMLEEIINYVHSLQNQVEFLSMELAAASSSNDLN 225
>gi|295913621|gb|ADG58055.1| transcription factor [Lycoris longituba]
Length = 207
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 57/78 (73%), Positives = 64/78 (82%)
Query: 329 DKQAKANNAKPPEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKV 388
D + K + +DYIHVRARRG+ATDSHSLAERVRRE+ISERMK L+ LVPGCNK+
Sbjct: 130 DDSGNGSKEKNEDKKQDYIHVRARRGEATDSHSLAERVRRERISERMKYLEGLVPGCNKI 189
Query: 389 TGKALMLDEIINYVQSLQ 406
TGKA MLDEIINYVQSLQ
Sbjct: 190 TGKAGMLDEIINYVQSLQ 207
>gi|147818198|emb|CAN60403.1| hypothetical protein VITISV_034133 [Vitis vinifera]
Length = 484
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 83/206 (40%), Positives = 106/206 (51%), Gaps = 59/206 (28%)
Query: 329 DKQAKANNAKPPEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKV 388
+K AK N++ P ++YIHVRARRGQAT+SHSLAER+
Sbjct: 245 NKHAKDNSSNGEAPKENYIHVRARRGQATNSHSLAERI---------------------- 282
Query: 389 TGKALMLDEIINYVQSLQRQVEFLSMKLASVNTRLELNVDALMSKDIYQPNKPLPHSIFQ 448
TGKA+MLDEIINYVQSLQ+QVEFLSMKLA+VN L ++++ L+SKDI
Sbjct: 283 TGKAVMLDEIINYVQSLQQQVEFLSMKLATVNPELNIDIERLLSKDILNSRGG------- 335
Query: 449 IDSSASAFFSHQPQQNPALHGNISNGTMTQCPVDPLDNALCRNLSMQLPQLEQFTETIPQ 508
+S F +P HG IS GT+ P PQ
Sbjct: 336 -STSVLGFGPGMSSSHPYPHG-ISQGTLPGIPT-------------------------PQ 368
Query: 509 F---QNFGEDDLQSIVQMGFGQNPNS 531
F Q + +LQS++QMGF NP+S
Sbjct: 369 FHSTQAVWDGELQSLLQMGFDSNPSS 394
>gi|297844782|ref|XP_002890272.1| F15H18.11 [Arabidopsis lyrata subsp. lyrata]
gi|297336114|gb|EFH66531.1| F15H18.11 [Arabidopsis lyrata subsp. lyrata]
Length = 1143
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 57/70 (81%), Positives = 62/70 (88%)
Query: 347 IHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQ 406
+HVRARRGQATDSHSLAERVRR KI+ER++ LQD+VPGC K G A MLDEIINYVQSLQ
Sbjct: 1026 VHVRARRGQATDSHSLAERVRRGKINERLRCLQDMVPGCYKAMGMATMLDEIINYVQSLQ 1085
Query: 407 RQVEFLSMKL 416
QVEFLSMKL
Sbjct: 1086 NQVEFLSMKL 1095
>gi|297606176|ref|NP_001058071.2| Os06g0613500 [Oryza sativa Japonica Group]
gi|255677227|dbj|BAF19985.2| Os06g0613500, partial [Oryza sativa Japonica Group]
Length = 178
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 57/75 (76%), Positives = 70/75 (93%)
Query: 351 ARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVE 410
ARRGQATDSHSLAER RREKI+ RM+LL++LVPGC+KV+G AL+LDEIIN+VQSLQRQVE
Sbjct: 1 ARRGQATDSHSLAERARREKINARMELLKELVPGCSKVSGTALVLDEIINHVQSLQRQVE 60
Query: 411 FLSMKLASVNTRLEL 425
+LSM+LA+VN R++
Sbjct: 61 YLSMRLAAVNPRVDF 75
>gi|224057820|ref|XP_002299340.1| predicted protein [Populus trichocarpa]
gi|222846598|gb|EEE84145.1| predicted protein [Populus trichocarpa]
Length = 222
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 61/107 (57%), Positives = 75/107 (70%)
Query: 314 KANGNGAVKAEDEGDDKQAKANNAKPPEPPKDYIHVRARRGQATDSHSLAERVRREKISE 373
K N +V E + A P E P Y+HVRARRG+ATDSHSLAERVRRE+IS
Sbjct: 42 KRNPKSSVSTNLERQRPTKRQKKAPPLEHPTGYVHVRARRGEATDSHSLAERVRRERISA 101
Query: 374 RMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMKLASVN 420
+MKLLQ LVPGC+++TGKAL+LDEII YVQSL+ ++ L +L VN
Sbjct: 102 KMKLLQSLVPGCDQITGKALILDEIIRYVQSLKDRIGSLEAELVLVN 148
>gi|255543172|ref|XP_002512649.1| conserved hypothetical protein [Ricinus communis]
gi|223548610|gb|EEF50101.1| conserved hypothetical protein [Ricinus communis]
Length = 297
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 60/98 (61%), Positives = 75/98 (76%), Gaps = 3/98 (3%)
Query: 342 PPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINY 401
P Y+HVRARRG+ATD HSLAERVRR+KIS RMKLLQ LVPGC+K+TGKA +LDEII +
Sbjct: 157 PLTGYVHVRARRGEATDPHSLAERVRRKKISVRMKLLQSLVPGCDKLTGKAQILDEIIRH 216
Query: 402 VQSLQRQVEFLSMKLASVN---TRLELNVDALMSKDIY 436
V SLQ QVEFL+ K S N + ++ L++K++Y
Sbjct: 217 VLSLQNQVEFLAAKFTSENGIANEVNYEMNTLVAKELY 254
>gi|388519201|gb|AFK47662.1| unknown [Lotus japonicus]
Length = 274
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 56/79 (70%), Positives = 67/79 (84%)
Query: 348 HVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQR 407
HVRARRGQATDSHSLAERVRR KI+E+++ LQ++VPGC K G A+MLDEIINYVQSLQ
Sbjct: 156 HVRARRGQATDSHSLAERVRRGKINEKLRCLQNIVPGCYKTMGMAVMLDEIINYVQSLQH 215
Query: 408 QVEFLSMKLASVNTRLELN 426
QVEFLS+KL + +T + N
Sbjct: 216 QVEFLSLKLTAASTYYDFN 234
>gi|30695832|ref|NP_567057.2| transcription factor bHLH60 [Arabidopsis thaliana]
gi|122214701|sp|Q3EAI1.1|BH060_ARATH RecName: Full=Transcription factor bHLH60; AltName: Full=Basic
helix-loop-helix protein 60; Short=AtbHLH60; Short=bHLH
60; AltName: Full=Transcription factor EN 91; AltName:
Full=bHLH transcription factor bHLH060
gi|332646181|gb|AEE79702.1| transcription factor bHLH60 [Arabidopsis thaliana]
Length = 426
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 64/136 (47%), Positives = 80/136 (58%), Gaps = 47/136 (34%)
Query: 346 YIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNK------------------ 387
Y+HVRARRGQATDSHSLAER RREKI+ RMKLLQ+LVPGC+K
Sbjct: 201 YVHVRARRGQATDSHSLAERARREKINARMKLLQELVPGCDKGTDFGGKIKIKVCFGVHL 260
Query: 388 -----------------------------VTGKALMLDEIINYVQSLQRQVEFLSMKLAS 418
+ G AL+LDEIIN+VQSLQRQVE LSM+LA+
Sbjct: 261 LMISGKKVAIFLWKVSCEDLIDCSFSPPRIQGTALVLDEIINHVQSLQRQVEMLSMRLAA 320
Query: 419 VNTRLELNVDALMSKD 434
VN R++ N+D +++ +
Sbjct: 321 VNPRIDFNLDTILASE 336
>gi|168024073|ref|XP_001764561.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684139|gb|EDQ70543.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 62
Score = 122 bits (307), Expect = 4e-25, Method: Composition-based stats.
Identities = 59/62 (95%), Positives = 60/62 (96%)
Query: 349 VRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQ 408
VRARRGQATDSHSLAERVRREKISERMK LQDLVPGC KVTGKA+MLDEIINYVQSLQRQ
Sbjct: 1 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCRKVTGKAVMLDEIINYVQSLQRQ 60
Query: 409 VE 410
VE
Sbjct: 61 VE 62
>gi|58743491|gb|AAW81732.1| putative bZIPtranscription factor protein [Brassica oleracea]
Length = 263
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 57/80 (71%), Positives = 66/80 (82%)
Query: 347 IHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQ 406
+HVRARRGQATDSHSLAERVRR KI+ER++ LQD+VPGC K G A MLDEIINYVQSLQ
Sbjct: 146 VHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKSMGMATMLDEIINYVQSLQ 205
Query: 407 RQVEFLSMKLASVNTRLELN 426
QVE LSMKL + ++ + N
Sbjct: 206 NQVELLSMKLTAASSFYDFN 225
>gi|224079313|ref|XP_002305819.1| predicted protein [Populus trichocarpa]
gi|222848783|gb|EEE86330.1| predicted protein [Populus trichocarpa]
Length = 276
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 53/75 (70%), Positives = 67/75 (89%)
Query: 344 KDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQ 403
K+ IHVRA+RGQATDSHS+AER+RREKI+ +++ LQD+VPGC+K G A+ML+EIINYV
Sbjct: 153 KEVIHVRAKRGQATDSHSIAERIRREKINNKLRCLQDIVPGCHKSMGMAVMLEEIINYVH 212
Query: 404 SLQRQVEFLSMKLAS 418
SLQ QVEFLSM+LA+
Sbjct: 213 SLQNQVEFLSMELAA 227
>gi|356554137|ref|XP_003545405.1| PREDICTED: transcription factor BEE 3-like [Glycine max]
Length = 305
Score = 121 bits (304), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 73/165 (44%), Positives = 98/165 (59%), Gaps = 33/165 (20%)
Query: 274 VSKGKGKETAASP---SVNNTTKVAEAN---ASESSKNKRCKPNEGKANGNGAVKAEDEG 327
+ +GK +++ P SVN+T KV+E+ S + KR K
Sbjct: 97 IHEGKKRKSMDLPETSSVNSTPKVSESGNKFKHSSGRGKRVK------------------ 138
Query: 328 DDKQAKANNAKPPEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNK 387
NN E K+ ++VRAR GQATDS +LAERVRR KI+E+++ LQ++VPGC K
Sbjct: 139 -------NNVTEEEKAKEVVNVRARSGQATDSRNLAERVRRGKINEKLRYLQNIVPGCYK 191
Query: 388 VTGKALMLDEIINYVQSLQRQVEFLSMKLASVNTRLELN--VDAL 430
G A+MLDEIINYVQSLQ QVEFLS+KL + +T + N +DAL
Sbjct: 192 TMGMAVMLDEIINYVQSLQNQVEFLSLKLTAPSTFYDFNSEIDAL 236
>gi|296087271|emb|CBI33645.3| unnamed protein product [Vitis vinifera]
Length = 319
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 56/81 (69%), Positives = 67/81 (82%)
Query: 341 EPPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIIN 400
+ P + IHVRARRGQATD+HS+AERVRREKI R++ LQDLVPGC K G A+MLDEIIN
Sbjct: 194 DKPDEVIHVRARRGQATDNHSIAERVRREKIKTRLRCLQDLVPGCYKNKGMAVMLDEIIN 253
Query: 401 YVQSLQRQVEFLSMKLASVNT 421
YV SLQ QVEFLS +LA+ ++
Sbjct: 254 YVHSLQNQVEFLSRELAAASS 274
>gi|414886198|tpg|DAA62212.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 172
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 82/187 (43%), Positives = 104/187 (55%), Gaps = 23/187 (12%)
Query: 375 MKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMKLASVNTRLEL-NVDALMSK 433
MK LQDLVPGCNKV GKALMLDEIINYVQSLQ+QVEFLSMKLA+VN +L+ N+ L+ K
Sbjct: 1 MKFLQDLVPGCNKVVGKALMLDEIINYVQSLQQQVEFLSMKLATVNPQLDFSNLSTLLHK 60
Query: 434 DIYQPNKPLPHSIFQIDSSASAF-FSHQPQQNPALHGNISNGTMTQCPVDPLDNALCRNL 492
D+YQP P +S+F ++S +AF F Q + G+ S QC + LD AL
Sbjct: 61 DMYQPCGPSANSVFPLESDGAAFPFCDQADLFHSF-GSGSAAMEDQCSLSLLDTALPHAA 119
Query: 493 SMQLPQLEQFTETIPQF------QNFGEDDLQSIVQMGFGQNPNSETSLQSQSFHGSNQA 546
+ PQF ++F ED LQ+ + G + E L +F G A
Sbjct: 120 N-------------PQFAFQKQQRDFWEDGLQNALPTG-SEQRQEEDGLLVPNFDGQLHA 165
Query: 547 PHMKAEL 553
K E
Sbjct: 166 DQTKVEF 172
>gi|414886200|tpg|DAA62214.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 161
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 66/116 (56%), Positives = 81/116 (69%), Gaps = 3/116 (2%)
Query: 375 MKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMKLASVNTRLEL-NVDALMSK 433
MK LQDLVPGCNKV GKALMLDEIINYVQSLQ+QVEFLSMKLA+VN +L+ N+ L+ K
Sbjct: 1 MKFLQDLVPGCNKVVGKALMLDEIINYVQSLQQQVEFLSMKLATVNPQLDFSNLSTLLHK 60
Query: 434 DIYQPNKPLPHSIFQIDSSASAF-FSHQPQQNPALHGNISNGTMTQCPVDPLDNAL 488
D+YQP P +S+F ++S +AF F Q + G+ S QC + LD AL
Sbjct: 61 DMYQPCGPSANSVFPLESDGAAFPFCDQADLFHSF-GSGSAAMEDQCSLSLLDTAL 115
>gi|414886199|tpg|DAA62213.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 162
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 66/116 (56%), Positives = 81/116 (69%), Gaps = 3/116 (2%)
Query: 375 MKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMKLASVNTRLEL-NVDALMSK 433
MK LQDLVPGCNKV GKALMLDEIINYVQSLQ+QVEFLSMKLA+VN +L+ N+ L+ K
Sbjct: 1 MKFLQDLVPGCNKVVGKALMLDEIINYVQSLQQQVEFLSMKLATVNPQLDFSNLSTLLHK 60
Query: 434 DIYQPNKPLPHSIFQIDSSASAF-FSHQPQQNPALHGNISNGTMTQCPVDPLDNAL 488
D+YQP P +S+F ++S +AF F Q + G+ S QC + LD AL
Sbjct: 61 DMYQPCGPSANSVFPLESDGAAFPFCDQADLFHSF-GSGSAAMEDQCSLSLLDTAL 115
>gi|147810591|emb|CAN71967.1| hypothetical protein VITISV_017400 [Vitis vinifera]
Length = 271
Score = 119 bits (297), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 57/86 (66%), Positives = 68/86 (79%), Gaps = 5/86 (5%)
Query: 341 EPPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVT-----GKALML 395
+ P + IHVRARRGQATD+HS+AERVRREKI R++ LQDLVPGC KV G A+ML
Sbjct: 140 DKPDEVIHVRARRGQATDNHSIAERVRREKIKTRLRCLQDLVPGCYKVYDPQNKGMAVML 199
Query: 396 DEIINYVQSLQRQVEFLSMKLASVNT 421
DEIINYV SLQ QVEFLS +LA+ ++
Sbjct: 200 DEIINYVHSLQNQVEFLSRELAAASS 225
>gi|168061161|ref|XP_001782559.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162665966|gb|EDQ52634.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 154
Score = 118 bits (295), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 58/77 (75%), Positives = 64/77 (83%)
Query: 344 KDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQ 403
+D+I VRARRGQATDS S+AE VR EKI +RMK LQDLVPGC KVTGK MLDEIINYVQ
Sbjct: 6 QDFIRVRARRGQATDSLSVAEWVRCEKIRKRMKYLQDLVPGCRKVTGKTDMLDEIINYVQ 65
Query: 404 SLQRQVEFLSMKLASVN 420
SLQ Q E LSMKL +V+
Sbjct: 66 SLQCQAESLSMKLGAVH 82
>gi|255572100|ref|XP_002526990.1| DNA binding protein, putative [Ricinus communis]
gi|223533625|gb|EEF35362.1| DNA binding protein, putative [Ricinus communis]
Length = 189
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 52/70 (74%), Positives = 61/70 (87%)
Query: 341 EPPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIIN 400
E PK+ IHVRA+RGQATDSHSLAERVRRE+I+E+++ LQDLVPGC K G A+MLD IIN
Sbjct: 113 EKPKEVIHVRAKRGQATDSHSLAERVRRERINEKLRCLQDLVPGCYKTMGMAVMLDVIIN 172
Query: 401 YVQSLQRQVE 410
YVQSLQ Q+E
Sbjct: 173 YVQSLQNQIE 182
>gi|356564005|ref|XP_003550247.1| PREDICTED: transcription factor BEE 1-like [Glycine max]
Length = 268
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 53/83 (63%), Positives = 67/83 (80%), Gaps = 2/83 (2%)
Query: 350 RARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQV 409
RARRGQATDSH+LAERVRR KI+E+++ LQ++VPGC K A+MLDEIINYVQSLQ QV
Sbjct: 152 RARRGQATDSHNLAERVRRGKINEKLRYLQNIVPGCYKTMSMAVMLDEIINYVQSLQHQV 211
Query: 410 EFLSMKLASVNTRLELN--VDAL 430
EFLS++L + +T + N +DA
Sbjct: 212 EFLSLELTAASTFYDFNSEIDAF 234
>gi|341941279|gb|AEL12217.1| putative cryptochrome-interacting basic helix-loop-helix 5 [Beta
vulgaris]
Length = 225
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 54/87 (62%), Positives = 68/87 (78%)
Query: 346 YIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSL 405
+++VRARRG+A DSHSLAERVRR+KIS +MKLLQ LVPGC+K TGK +LD IINY+ SL
Sbjct: 133 FVYVRARRGEAVDSHSLAERVRRQKISSKMKLLQSLVPGCDKTTGKVPILDTIINYIHSL 192
Query: 406 QRQVEFLSMKLASVNTRLELNVDALMS 432
Q QV+ L +LA V+ ++N AL S
Sbjct: 193 QDQVKSLMEELALVDPTFDVNYLALES 219
>gi|225456606|ref|XP_002267823.1| PREDICTED: transcription factor bHLH79 isoform 2 [Vitis vinifera]
Length = 262
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 70/141 (49%), Positives = 81/141 (57%), Gaps = 34/141 (24%)
Query: 302 SSKNKRCK----PNEGKANGNGAVKAEDEGDDKQAK--ANNAKPPEPPK-DYIHVRARRG 354
+S KR K P+E NG KAE E + A +KP E K DYIHVRARRG
Sbjct: 108 ASNGKRMKISRTPDE-----NGGSKAELEASSVAGEKPAEESKPAEQSKQDYIHVRARRG 162
Query: 355 QATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSM 414
QATDSHSLAERV GKAL+LDEIINY+QSLQRQVEFLSM
Sbjct: 163 QATDSHSLAERV----------------------IGKALVLDEIINYIQSLQRQVEFLSM 200
Query: 415 KLASVNTRLELNVDALMSKDI 435
KL +VN+R+ V+ KD+
Sbjct: 201 KLEAVNSRMNHTVEGFPLKDL 221
>gi|357500329|ref|XP_003620453.1| Transcription factor BEE [Medicago truncatula]
gi|355495468|gb|AES76671.1| Transcription factor BEE [Medicago truncatula]
Length = 263
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 55/103 (53%), Positives = 71/103 (68%), Gaps = 10/103 (9%)
Query: 327 GDDKQAKANNAKPPEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCN 386
G K+ K+ + E K+ +HVRARRGQATDSHSLAERVRR KI+E++K LQ++VPGC
Sbjct: 134 GRGKRVKSYETEE-EKAKEVVHVRARRGQATDSHSLAERVRRGKINEKLKCLQNIVPGCY 192
Query: 387 KVTGKALMLDEIINYVQSLQRQVEFLSMKLASVNTRLELNVDA 429
K G A+MLDEIINY FLS+KL + +T + N +A
Sbjct: 193 KTMGMAVMLDEIINY---------FLSLKLTAASTYYDFNSEA 226
>gi|326521778|dbj|BAK00465.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 173
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 56/101 (55%), Positives = 72/101 (71%), Gaps = 8/101 (7%)
Query: 306 KRCKPNEGKANGNGAVKAEDEGDDKQA-KANNAKPPEPPKDYIHVRARRGQATDSHSLAE 364
KR K N+ ++ NG+ + + E D + A KA + PP P +D+IHVRARRGQATDSHSLAE
Sbjct: 77 KRFKANKS-SDDNGSFRKDAEADSRNASKAVDQNPPPPKQDFIHVRARRGQATDSHSLAE 135
Query: 365 RVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSL 405
R RREKI+ERMK+LQDLVPGCNK ++ + Y QS+
Sbjct: 136 RARREKITERMKILQDLVPGCNK------LMRPWLGYWQSI 170
>gi|3540186|gb|AAC34336.1| Hypothetical protein [Arabidopsis thaliana]
Length = 339
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 78/202 (38%), Positives = 104/202 (51%), Gaps = 74/202 (36%)
Query: 342 PPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINY 401
P ++YIH+RARRGQAT+SHSLAER+ TGKA+MLDEIINY
Sbjct: 199 PKENYIHMRARRGQATNSHSLAERI----------------------TGKAVMLDEIINY 236
Query: 402 VQSLQRQVEFLSMKLASVNTRLELNVDALMSKDIYQP---NKPL----PHSIFQIDSSAS 454
VQSLQ+QVEFLSMKLA+VN + +++D +++KD+ Q N P P + FQ
Sbjct: 237 VQSLQQQVEFLSMKLATVNPEINIDIDRILAKDLLQSRDRNTPTLGLNPFAGFQ------ 290
Query: 455 AFFSHQPQQNPALHGNISNGTMTQCP-VDPLDNALCRNLSMQLPQLEQFTETIPQFQNFG 513
GNI N + T P +P LPQ T+
Sbjct: 291 --------------GNIPNLSATTNPQYNP------------LPQT-----TL------- 312
Query: 514 EDDLQSIVQMGFGQNPNSETSL 535
E +LQ++ QMGF NP++ +S
Sbjct: 313 ESELQNLYQMGFVSNPSTMSSF 334
>gi|357480123|ref|XP_003610347.1| Transcription factor bHLH66 [Medicago truncatula]
gi|355511402|gb|AES92544.1| Transcription factor bHLH66 [Medicago truncatula]
Length = 403
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 68/154 (44%), Positives = 94/154 (61%), Gaps = 10/154 (6%)
Query: 261 QVPNDFNSRKRKAVSKGKGKETAASPSVNNTTKVAEANASESSKNKRCKPNEGKANGNGA 320
+P DF+S + V+ + A SV + ++ +P +G++ G+G+
Sbjct: 120 HMPADFDSSQNDVVNTSSLLQAAGDASVQALFNGFSGSLHGVAQPHHFQPPQGQSFGSGS 179
Query: 321 VKAEDEGDDKQAKANNAKPPEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQD 380
V A + QA A+ A P +P + VRARRGQATD HS+AER+RRE+I+ERMK LQ+
Sbjct: 180 VSATN-----QAPASGA-PAQPRQK---VRARRGQATDPHSIAERLRRERIAERMKALQE 230
Query: 381 LVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSM 414
LVP NK T KA MLDEII+YV+ LQ QV+ LSM
Sbjct: 231 LVPNANK-TDKASMLDEIIDYVKFLQVQVKVLSM 263
>gi|223942973|gb|ACN25570.1| unknown [Zea mays]
gi|413951549|gb|AFW84198.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 156
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 74/165 (44%), Positives = 97/165 (58%), Gaps = 14/165 (8%)
Query: 394 MLDEIINYVQSLQRQVEFLSMKLASVNTRLELNV--DALMSKDIYQPNKPLPHSIFQIDS 451
MLDEIINYVQSLQRQVEFLSMKLA+VN +L+ N + L+ KDI+QP P PH F +++
Sbjct: 1 MLDEIINYVQSLQRQVEFLSMKLATVNPQLDFNSLPNLLLPKDIHQPCGP-PH--FPLET 57
Query: 452 SASAF-FSHQPQQNPALHG--NISNGTMTQCPVDPLDNALCRNLSMQLPQLEQFTETIPQ 508
S + + QP L + G+M PLD A CR ++ Q P L ++ Q
Sbjct: 58 SGAPLPYLSQPHHGSPLGCCMDTQGGSM-----HPLDAAFCRPMNPQHPFLNGASDAASQ 112
Query: 509 FQNFGEDDLQSIVQMGFGQNPNSETSLQSQSFHGSNQAPHMKAEL 553
F +DDLQS+V M GQ+ + S S++GS Q HMK EL
Sbjct: 113 VGTFWQDDLQSVVHMDIGQSQEIAPT-SSNSYNGSLQTVHMKMEL 156
>gi|224077848|ref|XP_002305434.1| predicted protein [Populus trichocarpa]
gi|222848398|gb|EEE85945.1| predicted protein [Populus trichocarpa]
Length = 177
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 76/184 (41%), Positives = 103/184 (55%), Gaps = 12/184 (6%)
Query: 375 MKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMKLASVNTRLELNVDALMSKD 434
MK LQDLVPGCN +TGKA MLDEIINYVQSLQRQVEFLSMKLA+VN RL+ N+D L +K+
Sbjct: 1 MKYLQDLVPGCNNITGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRLDFNIDNLFAKE 60
Query: 435 IYQPNKP-LPHSIFQIDSSASAFFSHQPQQNPALHGNISNGTMTQCPVDPLDNALCRNLS 493
+ P D + +A+ Q NPA +S + ++P D L R S
Sbjct: 61 AFPACSTNFPAIGMSPDMTNAAYL----QFNPAQQQLVSCCGLDM-GINPPDMGLRRTTS 115
Query: 494 MQLPQLEQFTET--IPQFQN--FGEDDLQSIVQMGFGQNPNSETSLQSQSFHGSNQAPHM 549
+ E F ++ Q Q + DL ++ + F Q +T+ Q F GS +A ++
Sbjct: 116 TPVSIPETFLDSSCFTQIQAPPTWDADLPNLYNVAFDQ--GRQTTFPVQPFSGSVEASNL 173
Query: 550 KAEL 553
K E+
Sbjct: 174 KMEM 177
>gi|388493796|gb|AFK34964.1| unknown [Lotus japonicus]
gi|388513685|gb|AFK44904.1| unknown [Lotus japonicus]
Length = 180
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 76/188 (40%), Positives = 104/188 (55%), Gaps = 17/188 (9%)
Query: 375 MKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMKLASVNTRLELNVDALMSKD 434
MK LQDLVPGCNK+ GKA MLDEIINYVQSLQRQVEFLSMKLA+VN RL+ N+D L K+
Sbjct: 1 MKYLQDLVPGCNKIAGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRLDFNIDELFVKE 60
Query: 435 IY-QPNKPLPHSIFQID-SSASAFFSH-QPQQNPALHGNISNGTMTQCPVDPLDNALCRN 491
++ + P Q D ++ A+ QQ + G + N T + P D + RN
Sbjct: 61 VFPACAQSFPSIGMQSDMTNHPAYLQFNSAQQLVSYCGGLVNNT----EIIPTDMGVRRN 116
Query: 492 LSMQLPQLEQ------FTETIPQFQNFGEDDLQSIVQMGFGQNPNSETSLQSQSFHGSNQ 545
+++ + E FT+ +P E D Q++ + F Q +S S Q F +
Sbjct: 117 MNVPVSMPETFLDSSCFTQILPSLS--WEGDFQNLQSVAFDQGRSS--SFPFQPFTDLVE 172
Query: 546 APHMKAEL 553
A +K E+
Sbjct: 173 ASDLKMEM 180
>gi|223948547|gb|ACN28357.1| unknown [Zea mays]
Length = 188
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 75/185 (40%), Positives = 91/185 (49%), Gaps = 42/185 (22%)
Query: 375 MKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMKLASVNTRLELNVD------ 428
MKLLQDLVPGC+KVTGKA+MLDEIINYVQSLQRQVEFLSMKL++VN RLEL D
Sbjct: 1 MKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLSTVNPRLELGADDSFVPR 60
Query: 429 ---------ALMSKDIYQPNKPLPHSIFQIDSSASAFFSHQPQQNPALHGNI-------- 471
A S + Q PLP + ++ S+ AF P +
Sbjct: 61 DDANKMCAAATSSISMAQQPLPLPAAYHALEGSSPAFCYTTTPPAPGTAARLGVAASDAK 120
Query: 472 --------SNGTMTQCPV---DPLDNALCRNLSMQLPQLEQFTETIPQFQNFGEDDLQSI 520
S T+ PL+ N S Q+ + E G+DDLQS+
Sbjct: 121 AFEMAPPSSAATVNHAGTAERRPLEGPADENASPQMGGRSLWEE--------GDDDLQSL 172
Query: 521 VQMGF 525
V MGF
Sbjct: 173 VLMGF 177
>gi|147797633|emb|CAN71939.1| hypothetical protein VITISV_038910 [Vitis vinifera]
Length = 381
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 52/96 (54%), Positives = 65/96 (67%), Gaps = 22/96 (22%)
Query: 342 PPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINY 401
P +DYIHVRA+RGQAT+SHSLAER+ TGKA+MLDEIINY
Sbjct: 239 PKEDYIHVRAKRGQATNSHSLAERI----------------------TGKAVMLDEIINY 276
Query: 402 VQSLQRQVEFLSMKLASVNTRLELNVDALMSKDIYQ 437
VQSLQRQVEFLSMKLA+V + + ++ ++S DI+
Sbjct: 277 VQSLQRQVEFLSMKLATVYPEMNVQIERILSSDIHH 312
>gi|449435746|ref|XP_004135655.1| PREDICTED: transcription factor UNE12-like [Cucumis sativus]
Length = 318
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 54/97 (55%), Positives = 70/97 (72%), Gaps = 2/97 (2%)
Query: 337 AKPPEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLD 396
A P+PP+ VRARRGQATD HS+AER+RRE+I+ERMK LQ+LVP CNK T +A MLD
Sbjct: 145 AAIPQPPQVRPRVRARRGQATDPHSIAERLRRERIAERMKALQELVPSCNK-TDRAAMLD 203
Query: 397 EIINYVQSLQRQVEFLSM-KLASVNTRLELNVDALMS 432
EI++YV+ L+ QV+ LSM +L +L D +S
Sbjct: 204 EIVDYVKFLRLQVKVLSMSRLGGAGAVAQLVADVPLS 240
>gi|449530006|ref|XP_004171988.1| PREDICTED: transcription factor UNE12-like, partial [Cucumis
sativus]
Length = 219
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 54/97 (55%), Positives = 70/97 (72%), Gaps = 2/97 (2%)
Query: 337 AKPPEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLD 396
A P+PP+ VRARRGQATD HS+AER+RRE+I+ERMK LQ+LVP CNK T +A MLD
Sbjct: 46 AAIPQPPQVRPRVRARRGQATDPHSIAERLRRERIAERMKALQELVPSCNK-TDRAAMLD 104
Query: 397 EIINYVQSLQRQVEFLSM-KLASVNTRLELNVDALMS 432
EI++YV+ L+ QV+ LSM +L +L D +S
Sbjct: 105 EIVDYVKFLRLQVKVLSMSRLGGAGAVAQLVADVPLS 141
>gi|357480125|ref|XP_003610348.1| Transcription factor bHLH66 [Medicago truncatula]
gi|355511403|gb|AES92545.1| Transcription factor bHLH66 [Medicago truncatula]
Length = 400
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 60/106 (56%), Positives = 78/106 (73%), Gaps = 10/106 (9%)
Query: 309 KPNEGKANGNGAVKAEDEGDDKQAKANNAKPPEPPKDYIHVRARRGQATDSHSLAERVRR 368
+P +G++ G+G+V A + QA A+ A P +P + VRARRGQATD HS+AER+RR
Sbjct: 165 QPPQGQSFGSGSVSATN-----QAPASGA-PAQPRQK---VRARRGQATDPHSIAERLRR 215
Query: 369 EKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSM 414
E+I+ERMK LQ+LVP NK T KA MLDEII+YV+ LQ QV+ LSM
Sbjct: 216 ERIAERMKALQELVPNANK-TDKASMLDEIIDYVKFLQVQVKVLSM 260
>gi|297728315|ref|NP_001176521.1| Os11g0442650 [Oryza sativa Japonica Group]
gi|255680061|dbj|BAH95249.1| Os11g0442650 [Oryza sativa Japonica Group]
Length = 461
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 142/468 (30%), Positives = 174/468 (37%), Gaps = 170/468 (36%)
Query: 131 ASCYTTPLNSPPKLNLPMSLGNSMPLNSSVAEFSADPGFAERAARFSRFGSRSFNGRSTG 190
ASCY+TP+ SP K + P+ S +A +AD AERAAR S + G
Sbjct: 93 ASCYSTPVGSPCK------PAPAPPVPSLLA--AADAMIAERAARMSCLAAAGHGG---- 140
Query: 191 QFVPNHNPDQFGLSRSNNNPNPMTANEKLPRVSSSPSLKVLGSQAQATGNKSPQDRSELA 250
KL R +SS SL L A A G +L
Sbjct: 141 --------------------------GKLSRAASSQSL--LAETAAAGGVH------QLP 166
Query: 251 NSQEESSVSEQVPNDFNSRKRKA-VSKGKGKETA-----------ASP--SVNNTTKVAE 296
S SS D RKRKA +K +GK+ A A P S T+
Sbjct: 167 ASDGSSS-------DAPCRKRKAPCAKARGKDAATTIAKVLRLLSAPPLQSRRRTSPETM 219
Query: 297 ANASES----SKNKRC------------KPNEGKA--NGNGAVKAEDEGDDKQAKANNAK 338
N +S +K K+C KP G A GNG K D
Sbjct: 220 VNFPQSPEPGTKAKKCKLSADAAGDEDTKPVAGDAGHGGNGKGKVLDAAG---------- 269
Query: 339 PPEPPKDYIHVRARRGQATDSHSLAER--------------------------------V 366
EPPKDYIHVRARRGQATDSHSLAER V
Sbjct: 270 --EPPKDYIHVRARRGQATDSHSLAERVKAAGIDAANHNFFFSSILAFADAIAAVFHLQV 327
Query: 367 RREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMKLASVNTRLELN 426
RREKISERMKLLQDLVPGCNKV A + ++ LN
Sbjct: 328 RREKISERMKLLQDLVPGCNKV----------------------------AKFSQKINLN 359
Query: 427 VDALMSKDIYQPNKPLPHSIFQIDSSASAFFSHQPQQNPALHGNISNGTMTQCPVDP--- 483
Q + P+ + + +P + S GT Q V
Sbjct: 360 F-------TLQASDPIMPAPLSLPPPPPPLSYSPEGASPGICYASSQGTAMQSVVTSTKH 412
Query: 484 LDNA--LCRNLSMQLPQLEQFTETIPQFQN-FGEDDLQSIVQMGFGQN 528
L+ A + + +P L+ F Q + EDDLQS+VQMGF N
Sbjct: 413 LETAPTFANHHVIPVPSLDGFHSAHSQAGSCMWEDDLQSVVQMGFRGN 460
>gi|224143968|ref|XP_002325140.1| predicted protein [Populus trichocarpa]
gi|222866574|gb|EEF03705.1| predicted protein [Populus trichocarpa]
Length = 251
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 53/84 (63%), Positives = 63/84 (75%), Gaps = 3/84 (3%)
Query: 331 QAKANNAKPPEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTG 390
QA +N P P+ VRARRGQATD HS+AER+RRE+I+ERMK LQ+LVP NK T
Sbjct: 21 QASGSNGGAPAQPRQ--RVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANK-TD 77
Query: 391 KALMLDEIINYVQSLQRQVEFLSM 414
KA MLDEII+YV+ LQ QV+ LSM
Sbjct: 78 KASMLDEIIDYVKFLQLQVKVLSM 101
>gi|297825371|ref|XP_002880568.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297326407|gb|EFH56827.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 353
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 54/86 (62%), Positives = 66/86 (76%), Gaps = 5/86 (5%)
Query: 342 PPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINY 401
PP+ VRARRGQATD HS+AER+RRE+I+ERMK LQ+LVP NK T KA MLDEII+Y
Sbjct: 131 PPQSRTKVRARRGQATDPHSIAERLRRERIAERMKALQELVPNGNK-TDKASMLDEIIDY 189
Query: 402 VQSLQRQVEFLSMK----LASVNTRL 423
V+ LQ QV+ LSM ASV+++L
Sbjct: 190 VKFLQLQVKVLSMSRLGGAASVSSQL 215
>gi|20127072|gb|AAM10955.1|AF488599_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 350
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 49/73 (67%), Positives = 59/73 (80%), Gaps = 1/73 (1%)
Query: 342 PPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINY 401
PP+ +RARRGQATD HS+AER+RRE+I+ERMK LQ+LVP NK T KA MLDEII+Y
Sbjct: 131 PPQSRTKIRARRGQATDPHSIAERLRRERIAERMKALQELVPNGNK-TDKASMLDEIIDY 189
Query: 402 VQSLQRQVEFLSM 414
V+ LQ QV+ LSM
Sbjct: 190 VEFLQLQVKVLSM 202
>gi|295913612|gb|ADG58051.1| transcription factor [Lycoris longituba]
Length = 95
Score = 102 bits (253), Expect = 7e-19, Method: Composition-based stats.
Identities = 49/60 (81%), Positives = 53/60 (88%)
Query: 364 ERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMKLASVNTRL 423
ERVRRE+I ERMK LQ LVPGCNK+TGKA ML+EIINYVQSLQRQVEFLSMKLA VN +
Sbjct: 3 ERVRRERIGERMKYLQGLVPGCNKITGKAGMLEEIINYVQSLQRQVEFLSMKLAGVNPEI 62
>gi|15224109|ref|NP_180003.1| transcription factor bHLH66 [Arabidopsis thaliana]
gi|75315918|sp|Q9ZUG9.1|BH066_ARATH RecName: Full=Transcription factor bHLH66; AltName: Full=Basic
helix-loop-helix protein 66; Short=AtbHLH66; Short=bHLH
66; AltName: Full=Transcription factor EN 95; AltName:
Full=bHLH transcription factor bHLH066
gi|4115386|gb|AAD03387.1| unknown protein [Arabidopsis thaliana]
gi|51970882|dbj|BAD44133.1| putative bHLH transcription factor (bHLH066) [Arabidopsis thaliana]
gi|111074492|gb|ABH04619.1| At2g24260 [Arabidopsis thaliana]
gi|330252457|gb|AEC07551.1| transcription factor bHLH66 [Arabidopsis thaliana]
Length = 350
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 49/73 (67%), Positives = 59/73 (80%), Gaps = 1/73 (1%)
Query: 342 PPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINY 401
PP+ +RARRGQATD HS+AER+RRE+I+ERMK LQ+LVP NK T KA MLDEII+Y
Sbjct: 131 PPQSRTKIRARRGQATDPHSIAERLRRERIAERMKALQELVPNGNK-TDKASMLDEIIDY 189
Query: 402 VQSLQRQVEFLSM 414
V+ LQ QV+ LSM
Sbjct: 190 VKFLQLQVKVLSM 202
>gi|51970922|dbj|BAD44153.1| putative bHLH transcription factor (bHLH066) [Arabidopsis thaliana]
Length = 350
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 49/73 (67%), Positives = 59/73 (80%), Gaps = 1/73 (1%)
Query: 342 PPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINY 401
PP+ +RARRGQATD HS+AER+RRE+I+ERMK LQ+LVP NK T KA MLDEII+Y
Sbjct: 131 PPQSRTKIRARRGQATDPHSIAERLRRERIAERMKALQELVPNGNK-TDKASMLDEIIDY 189
Query: 402 VQSLQRQVEFLSM 414
V+ LQ QV+ LSM
Sbjct: 190 VKFLQLQVKVLSM 202
>gi|125564328|gb|EAZ09708.1| hypothetical protein OsI_31996 [Oryza sativa Indica Group]
Length = 236
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 55/108 (50%), Positives = 74/108 (68%), Gaps = 4/108 (3%)
Query: 350 RARRGQATDSHSL---AERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQ 406
+ R+ + D+ SL +VRRE+ISERM++LQ LVPGC+KVTGKAL+LDEIINYVQSLQ
Sbjct: 59 KKRKPREEDTASLNSAHSKVRRERISERMRMLQALVPGCDKVTGKALILDEIINYVQSLQ 118
Query: 407 RQVEFLSMKLASVNTRLE-LNVDALMSKDIYQPNKPLPHSIFQIDSSA 453
QVEFLSM++AS++ L +D+ D Q + + H I +S
Sbjct: 119 NQVEFLSMRIASLSPVLYGFGIDSDAFSDHSQKMEGMFHEAVAIPASV 166
>gi|242037799|ref|XP_002466294.1| hypothetical protein SORBIDRAFT_01g005130 [Sorghum bicolor]
gi|241920148|gb|EER93292.1| hypothetical protein SORBIDRAFT_01g005130 [Sorghum bicolor]
Length = 283
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 51/94 (54%), Positives = 68/94 (72%), Gaps = 2/94 (2%)
Query: 340 PEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEII 399
P+PP VRARRGQATD HS+AER+RRE+I+ERM+ LQ+LVP NK T +A+MLDEI+
Sbjct: 113 PQPPAPRPKVRARRGQATDPHSIAERLRRERIAERMRALQELVPNTNK-TDRAVMLDEIL 171
Query: 400 NYVQSLQRQVEFLSM-KLASVNTRLELNVDALMS 432
+YV+ L+ QV+ LSM +L +L D +S
Sbjct: 172 DYVKFLRLQVKVLSMSRLGGAGAVAQLVADIPLS 205
>gi|226495509|ref|NP_001152044.1| LOC100285681 [Zea mays]
gi|195652123|gb|ACG45529.1| BHLH transcription factor [Zea mays]
gi|413932798|gb|AFW67349.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 285
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 51/94 (54%), Positives = 67/94 (71%), Gaps = 2/94 (2%)
Query: 340 PEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEII 399
P+PP VRARRGQATD HS+AER+RRE+I+ERM+ LQ+LVP NK T +A MLDEI+
Sbjct: 115 PQPPAPRPKVRARRGQATDPHSIAERLRRERIAERMRALQELVPNTNK-TDRAAMLDEIL 173
Query: 400 NYVQSLQRQVEFLSM-KLASVNTRLELNVDALMS 432
+YV+ L+ QV+ LSM +L +L D +S
Sbjct: 174 DYVKFLRLQVKVLSMSRLGGAGAVAQLVADIPLS 207
>gi|224131266|ref|XP_002328496.1| predicted protein [Populus trichocarpa]
gi|222838211|gb|EEE76576.1| predicted protein [Populus trichocarpa]
Length = 182
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 51/94 (54%), Positives = 68/94 (72%), Gaps = 2/94 (2%)
Query: 340 PEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEII 399
P+PP VRARRGQATD HS+AER+RR +I+ER+K LQ+LVP CNK T +A MLDEI+
Sbjct: 11 PQPPGIRPRVRARRGQATDPHSIAERLRRVRITERVKALQELVPTCNK-TDRAAMLDEIV 69
Query: 400 NYVQSLQRQVEFLSM-KLASVNTRLELNVDALMS 432
+YV+ L+ QV+ LSM +L + +L D +S
Sbjct: 70 DYVKFLRLQVKVLSMSRLGAAGAVAQLVADVPLS 103
>gi|116309555|emb|CAH66617.1| OSIGBa0144C23.3 [Oryza sativa Indica Group]
Length = 157
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 46/61 (75%), Positives = 54/61 (88%)
Query: 375 MKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMKLASVNTRLELNVDALMSKD 434
MKLLQ LVPGCNK+TGKALMLDEIINYVQSLQRQVEFLSMKLA++N +L+ + + SKD
Sbjct: 1 MKLLQSLVPGCNKITGKALMLDEIINYVQSLQRQVEFLSMKLATMNPQLDFDSHYMPSKD 60
Query: 435 I 435
+
Sbjct: 61 M 61
>gi|359487888|ref|XP_002274833.2| PREDICTED: transcription factor UNE12-like [Vitis vinifera]
Length = 331
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 52/93 (55%), Positives = 65/93 (69%), Gaps = 2/93 (2%)
Query: 337 AKPPEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLD 396
A P PP VRARRGQATD HS+AER+RRE+I+ERMK LQ+LVP NK T +A MLD
Sbjct: 157 AAQPHPPAIRPRVRARRGQATDPHSIAERLRRERIAERMKALQELVPSANK-TDRAAMLD 215
Query: 397 EIINYVQSLQRQVEFLSM-KLASVNTRLELNVD 428
EI++YV+ L+ QV+ LSM +L +L D
Sbjct: 216 EIVDYVKFLRLQVKVLSMSRLGGAGAVAQLVAD 248
>gi|255565001|ref|XP_002523493.1| conserved hypothetical protein [Ricinus communis]
gi|223537200|gb|EEF38832.1| conserved hypothetical protein [Ricinus communis]
Length = 474
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 52/84 (61%), Positives = 62/84 (73%), Gaps = 3/84 (3%)
Query: 331 QAKANNAKPPEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTG 390
QA + P P+ VRARRGQATD HS+AER+RRE+I+ERMK LQ+LVP NK T
Sbjct: 240 QASGSTGGAPAQPRQ--RVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANK-TD 296
Query: 391 KALMLDEIINYVQSLQRQVEFLSM 414
KA MLDEII+YV+ LQ QV+ LSM
Sbjct: 297 KASMLDEIIDYVKFLQLQVKVLSM 320
>gi|413968544|gb|AFW90609.1| basic helix-loop-helix protein BHLH3 [Solanum tuberosum]
Length = 303
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 51/89 (57%), Positives = 66/89 (74%), Gaps = 2/89 (2%)
Query: 341 EPPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIIN 400
+PP VRARRGQATD HS+AER+RRE+ISER+K LQ+LVP CNK T +A MLDEI++
Sbjct: 133 QPPSIRPRVRARRGQATDPHSIAERLRRERISERIKALQELVPSCNK-TDRAAMLDEILD 191
Query: 401 YVQSLQRQVEFLSM-KLASVNTRLELNVD 428
YV+ L+ QV+ LSM +L + +L D
Sbjct: 192 YVKFLRLQVKVLSMSRLGGASAVAQLVAD 220
>gi|225432880|ref|XP_002284047.1| PREDICTED: transcription factor UNE12 [Vitis vinifera]
gi|297737150|emb|CBI26351.3| unnamed protein product [Vitis vinifera]
Length = 313
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 51/90 (56%), Positives = 64/90 (71%), Gaps = 2/90 (2%)
Query: 340 PEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEII 399
P PP VRARRGQATD HS+AER+RRE+I+ERMK LQ+LVP NK T +A MLDEI+
Sbjct: 142 PHPPAIRPRVRARRGQATDPHSIAERLRRERIAERMKALQELVPSSNK-TDRAAMLDEIV 200
Query: 400 NYVQSLQRQVEFLSM-KLASVNTRLELNVD 428
+YV+ L+ QV+ LSM +L +L D
Sbjct: 201 DYVKFLRLQVKVLSMSRLGGAGAVAQLVAD 230
>gi|357118504|ref|XP_003560994.1| PREDICTED: transcription factor bHLH66-like [Brachypodium
distachyon]
Length = 388
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 52/83 (62%), Positives = 63/83 (75%), Gaps = 2/83 (2%)
Query: 332 AKANNAKPPEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGK 391
A A++ PP+ VRARRGQATD HS+AER+RRE+I+ERMK LQ+LVP NK T K
Sbjct: 167 APASSGGGAAPPRQ-TRVRARRGQATDPHSIAERLRRERIAERMKSLQELVPNANK-TDK 224
Query: 392 ALMLDEIINYVQSLQRQVEFLSM 414
A MLDEII+YV+ LQ QV+ LSM
Sbjct: 225 ASMLDEIIDYVKFLQLQVKVLSM 247
>gi|326498007|dbj|BAJ94866.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 481
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 80/185 (43%), Positives = 97/185 (52%), Gaps = 38/185 (20%)
Query: 237 ATGNKSPQDRSELANSQEESSVSEQVPN-DFNSRKRKAVSKGKGKETAASPSVNNTTKVA 295
TG +S L Q+E + +P F S + AVS+ +G A PS TT +
Sbjct: 231 GTGQQSQLAGGGLKAEQQEQNTMCNIPLPSFVSASQMAVSEAQG---ALIPS--KTTSIT 285
Query: 296 EANASE------SSKNKRCKPNEGKANGNGAVKAEDEGDDKQAKANNAKPPEPPKDYIHV 349
N SE S + + K N G NGN A +AKP
Sbjct: 286 HNNKSEYPIPISHSADVQHKANSG--NGNSA---------------SAKP--------RA 320
Query: 350 RARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQV 409
RARRGQATD HS+AER+RREKISERMK LQDLVP NK K+ MLDEII+YV+ LQ QV
Sbjct: 321 RARRGQATDPHSIAERLRREKISERMKNLQDLVPNSNKA-DKSSMLDEIIDYVKFLQLQV 379
Query: 410 EFLSM 414
+ LSM
Sbjct: 380 KVLSM 384
>gi|224123420|ref|XP_002319074.1| predicted protein [Populus trichocarpa]
gi|222857450|gb|EEE94997.1| predicted protein [Populus trichocarpa]
Length = 178
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 50/94 (53%), Positives = 68/94 (72%), Gaps = 2/94 (2%)
Query: 340 PEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEII 399
P+PP VRARRGQATD HS+AER+RR +I+ER+K LQ+LVP CNK T +A MLDEI+
Sbjct: 7 PQPPGIRPRVRARRGQATDPHSIAERLRRVRITERVKALQELVPTCNK-TDRAAMLDEIV 65
Query: 400 NYVQSLQRQVEFLSM-KLASVNTRLELNVDALMS 432
+YV+ L+ Q++ LSM +L + +L D +S
Sbjct: 66 DYVKFLRLQIKVLSMSRLGAAGAVAQLVADVPLS 99
>gi|242047606|ref|XP_002461549.1| hypothetical protein SORBIDRAFT_02g004570 [Sorghum bicolor]
gi|241924926|gb|EER98070.1| hypothetical protein SORBIDRAFT_02g004570 [Sorghum bicolor]
Length = 277
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 51/94 (54%), Positives = 67/94 (71%), Gaps = 2/94 (2%)
Query: 340 PEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEII 399
P+PP VRARRGQATD HS+AER+RRE+I+ERM+ LQ+LVP NK T +A MLDEI+
Sbjct: 106 PQPPAPRPKVRARRGQATDPHSIAERLRRERIAERMRALQELVPNTNK-TDRAAMLDEIL 164
Query: 400 NYVQSLQRQVEFLSM-KLASVNTRLELNVDALMS 432
+YV+ L+ QV+ LSM +L +L D +S
Sbjct: 165 DYVKFLRLQVKVLSMSRLGGAGAVAQLVADIPLS 198
>gi|226496235|ref|NP_001140213.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
gi|194698524|gb|ACF83346.1| unknown [Zea mays]
gi|195636992|gb|ACG37964.1| BHLH transcription factor [Zea mays]
gi|414883773|tpg|DAA59787.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 285
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 51/94 (54%), Positives = 67/94 (71%), Gaps = 2/94 (2%)
Query: 340 PEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEII 399
P+PP VRARRGQATD HS+AER+RRE+I+ERM+ LQ+LVP NK T +A MLDEI+
Sbjct: 107 PQPPAPRPKVRARRGQATDPHSIAERLRRERIAERMRALQELVPNTNK-TDRAAMLDEIL 165
Query: 400 NYVQSLQRQVEFLSM-KLASVNTRLELNVDALMS 432
+YV+ L+ QV+ LSM +L +L D +S
Sbjct: 166 DYVKFLRLQVKVLSMSRLGGAGAVAQLVADIPLS 199
>gi|298204851|emb|CBI34158.3| unnamed protein product [Vitis vinifera]
Length = 261
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 52/94 (55%), Positives = 65/94 (69%), Gaps = 2/94 (2%)
Query: 337 AKPPEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLD 396
A P PP VRARRGQATD HS+AER+RRE+I+ERMK LQ+LVP NK T +A MLD
Sbjct: 87 AAQPHPPAIRPRVRARRGQATDPHSIAERLRRERIAERMKALQELVPSANK-TDRAAMLD 145
Query: 397 EIINYVQSLQRQVEFLSM-KLASVNTRLELNVDA 429
EI++YV+ L+ QV+ LSM +L +L D
Sbjct: 146 EIVDYVKFLRLQVKVLSMSRLGGAGAVAQLVADV 179
>gi|147771925|emb|CAN66761.1| hypothetical protein VITISV_032727 [Vitis vinifera]
Length = 337
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 51/90 (56%), Positives = 64/90 (71%), Gaps = 2/90 (2%)
Query: 340 PEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEII 399
P PP VRARRGQATD HS+AER+RRE+I+ERMK LQ+LVP NK T +A MLDEI+
Sbjct: 166 PHPPAIRPRVRARRGQATDPHSIAERLRRERIAERMKALQELVPSSNK-TDRAAMLDEIV 224
Query: 400 NYVQSLQRQVEFLSM-KLASVNTRLELNVD 428
+YV+ L+ QV+ LSM +L +L D
Sbjct: 225 DYVKFLRLQVKVLSMSRLGGAGAVAQLVAD 254
>gi|93280154|gb|ABF06705.1| Joka8 [Nicotiana plumbaginifolia]
Length = 360
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 48/66 (72%), Positives = 56/66 (84%), Gaps = 1/66 (1%)
Query: 349 VRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQ 408
VRARRGQATD HS+AER+RRE+I+ERMK LQ+LVP NK T KA MLDEII+YV+ LQ Q
Sbjct: 247 VRARRGQATDPHSIAERLRRERIAERMKALQELVPNANK-TDKASMLDEIIDYVKFLQLQ 305
Query: 409 VEFLSM 414
V+ LSM
Sbjct: 306 VKVLSM 311
>gi|77999289|gb|ABB16991.1| unknown [Solanum tuberosum]
Length = 304
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 51/88 (57%), Positives = 65/88 (73%), Gaps = 2/88 (2%)
Query: 342 PPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINY 401
PP VRARRGQATD HS+AER+RRE+ISER+K LQ+LVP CNK T +A MLDEI++Y
Sbjct: 135 PPSIRPRVRARRGQATDPHSIAERLRRERISERIKALQELVPSCNK-TDRAAMLDEILDY 193
Query: 402 VQSLQRQVEFLSM-KLASVNTRLELNVD 428
V+ L+ QV+ LSM +L + +L D
Sbjct: 194 VKFLRLQVKVLSMSRLGGASAVAQLVAD 221
>gi|20127075|gb|AAM10956.1|AF488601_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 310
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 52/79 (65%), Positives = 61/79 (77%), Gaps = 5/79 (6%)
Query: 336 NAKPPEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALML 395
A+P PK VRARRGQATD HS+AER+RRE+I+ERMK LQ+LVP NK T KA ML
Sbjct: 121 TAQPQTKPK----VRARRGQATDPHSIAERLRRERIAERMKSLQELVPNGNK-TDKASML 175
Query: 396 DEIINYVQSLQRQVEFLSM 414
DEII+YV+ LQ QV+ LSM
Sbjct: 176 DEIIDYVKFLQLQVKVLSM 194
>gi|30688869|ref|NP_194827.2| transcription factor bHLH69 [Arabidopsis thaliana]
gi|218563529|sp|Q8S3D5.2|BH069_ARATH RecName: Full=Transcription factor bHLH69; AltName: Full=Basic
helix-loop-helix protein 69; Short=AtbHLH69; Short=bHLH
69; AltName: Full=Transcription factor EN 94; AltName:
Full=bHLH transcription factor bHLH069
gi|225898837|dbj|BAH30549.1| hypothetical protein [Arabidopsis thaliana]
gi|332660437|gb|AEE85837.1| transcription factor bHLH69 [Arabidopsis thaliana]
Length = 310
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 52/79 (65%), Positives = 61/79 (77%), Gaps = 5/79 (6%)
Query: 336 NAKPPEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALML 395
A+P PK VRARRGQATD HS+AER+RRE+I+ERMK LQ+LVP NK T KA ML
Sbjct: 121 TAQPQTKPK----VRARRGQATDPHSIAERLRRERIAERMKSLQELVPNGNK-TDKASML 175
Query: 396 DEIINYVQSLQRQVEFLSM 414
DEII+YV+ LQ QV+ LSM
Sbjct: 176 DEIIDYVKFLQLQVKVLSM 194
>gi|2980768|emb|CAA18195.1| putative protein [Arabidopsis thaliana]
gi|7270000|emb|CAB79816.1| putative protein [Arabidopsis thaliana]
Length = 367
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 52/78 (66%), Positives = 61/78 (78%), Gaps = 5/78 (6%)
Query: 337 AKPPEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLD 396
A+P PK VRARRGQATD HS+AER+RRE+I+ERMK LQ+LVP NK T KA MLD
Sbjct: 179 AQPQTKPK----VRARRGQATDPHSIAERLRRERIAERMKSLQELVPNGNK-TDKASMLD 233
Query: 397 EIINYVQSLQRQVEFLSM 414
EII+YV+ LQ QV+ LSM
Sbjct: 234 EIIDYVKFLQLQVKVLSM 251
>gi|115455925|ref|NP_001051563.1| Os03g0797600 [Oryza sativa Japonica Group]
gi|31126765|gb|AAP44685.1| unknown protein [Oryza sativa Japonica Group]
gi|108711561|gb|ABF99356.1| Lipoamide dehydrogenase, putative, expressed [Oryza sativa Japonica
Group]
gi|113550034|dbj|BAF13477.1| Os03g0797600 [Oryza sativa Japonica Group]
gi|215737529|dbj|BAG96659.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218193907|gb|EEC76334.1| hypothetical protein OsI_13903 [Oryza sativa Indica Group]
Length = 294
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 51/94 (54%), Positives = 67/94 (71%), Gaps = 2/94 (2%)
Query: 340 PEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEII 399
P+PP VRARRGQATD HS+AER+RRE+I+ERM+ LQ+LVP NK T +A MLDEI+
Sbjct: 124 PQPPAPRPKVRARRGQATDPHSIAERLRRERIAERMRALQELVPNTNK-TDRAAMLDEIL 182
Query: 400 NYVQSLQRQVEFLSM-KLASVNTRLELNVDALMS 432
+YV+ L+ QV+ LSM +L +L D +S
Sbjct: 183 DYVKFLRLQVKVLSMSRLGGAGAVAQLVADIPLS 216
>gi|356530637|ref|XP_003533887.1| PREDICTED: transcription factor bHLH66-like [Glycine max]
Length = 452
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 48/66 (72%), Positives = 56/66 (84%), Gaps = 1/66 (1%)
Query: 349 VRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQ 408
VRARRGQATD HS+AER+RRE+I+ERMK LQ+LVP NK T KA MLDEII+YV+ LQ Q
Sbjct: 225 VRARRGQATDPHSIAERLRRERIAERMKALQELVPNANK-TDKASMLDEIIDYVKFLQLQ 283
Query: 409 VEFLSM 414
V+ LSM
Sbjct: 284 VKVLSM 289
>gi|302809450|ref|XP_002986418.1| hypothetical protein SELMODRAFT_425336 [Selaginella moellendorffii]
gi|300145954|gb|EFJ12627.1| hypothetical protein SELMODRAFT_425336 [Selaginella moellendorffii]
Length = 355
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 49/66 (74%), Positives = 56/66 (84%), Gaps = 1/66 (1%)
Query: 349 VRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQ 408
VRARRGQATD HS+AER+RREKI+ERMK LQ+LVP NK T KA MLDEII+YV+ LQ Q
Sbjct: 136 VRARRGQATDPHSIAERLRREKIAERMKALQELVPNANK-TDKASMLDEIIDYVKFLQLQ 194
Query: 409 VEFLSM 414
V+ LSM
Sbjct: 195 VKVLSM 200
>gi|168048453|ref|XP_001776681.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162671973|gb|EDQ58517.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 233
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 48/67 (71%), Positives = 56/67 (83%), Gaps = 1/67 (1%)
Query: 348 HVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQR 407
VRARRGQATD HS+AER+RRE+I+ERMK LQ+LVP NK T KA MLDEII+YV+ LQ
Sbjct: 31 RVRARRGQATDPHSIAERLRRERIAERMKALQELVPNSNK-TDKASMLDEIIDYVKFLQL 89
Query: 408 QVEFLSM 414
QV+ LSM
Sbjct: 90 QVKVLSM 96
>gi|168043431|ref|XP_001774188.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162674456|gb|EDQ60964.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 231
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 48/67 (71%), Positives = 56/67 (83%), Gaps = 1/67 (1%)
Query: 348 HVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQR 407
VRARRGQATD HS+AER+RRE+I+ERMK LQ+LVP NK T KA MLDEII+YV+ LQ
Sbjct: 30 RVRARRGQATDPHSIAERLRRERIAERMKALQELVPNSNK-TDKASMLDEIIDYVKFLQL 88
Query: 408 QVEFLSM 414
QV+ LSM
Sbjct: 89 QVKVLSM 95
>gi|222625964|gb|EEE60096.1| hypothetical protein OsJ_12958 [Oryza sativa Japonica Group]
Length = 294
Score = 98.6 bits (244), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 51/94 (54%), Positives = 67/94 (71%), Gaps = 2/94 (2%)
Query: 340 PEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEII 399
P+PP VRARRGQATD HS+AER+RRE+I+ERM+ LQ+LVP NK T +A MLDEI+
Sbjct: 124 PQPPAPRPKVRARRGQATDPHSIAERLRRERIAERMRALQELVPNTNK-TDRAAMLDEIL 182
Query: 400 NYVQSLQRQVEFLSM-KLASVNTRLELNVDALMS 432
+YV+ L+ QV+ LSM +L +L D +S
Sbjct: 183 DYVKFLRLQVKVLSMSRLGGAGAVAQLVADIPLS 216
>gi|356556714|ref|XP_003546668.1| PREDICTED: transcription factor bHLH66-like [Glycine max]
Length = 475
Score = 98.6 bits (244), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 48/66 (72%), Positives = 56/66 (84%), Gaps = 1/66 (1%)
Query: 349 VRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQ 408
VRARRGQATD HS+AER+RRE+I+ERMK LQ+LVP NK T KA MLDEII+YV+ LQ Q
Sbjct: 253 VRARRGQATDPHSIAERLRRERIAERMKALQELVPNANK-TDKASMLDEIIDYVKFLQLQ 311
Query: 409 VEFLSM 414
V+ LSM
Sbjct: 312 VKVLSM 317
>gi|297743632|emb|CBI36515.3| unnamed protein product [Vitis vinifera]
Length = 282
Score = 98.6 bits (244), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 51/84 (60%), Positives = 61/84 (72%), Gaps = 1/84 (1%)
Query: 331 QAKANNAKPPEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTG 390
Q A + P + VRARRGQATD HS+AER+RRE+I+ERMK LQ+LVP NK T
Sbjct: 86 QTPATGSAGGAPAQPRQRVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANK-TD 144
Query: 391 KALMLDEIINYVQSLQRQVEFLSM 414
KA MLDEII+YV+ LQ QV+ LSM
Sbjct: 145 KASMLDEIIDYVKFLQLQVKVLSM 168
>gi|413943961|gb|AFW76610.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 473
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 60/114 (52%), Positives = 74/114 (64%), Gaps = 6/114 (5%)
Query: 349 VRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQ 408
VRARRGQATD HS+AER+RREKIS+RMK LQDLVP NK KA MLDEII+YV+ LQ Q
Sbjct: 317 VRARRGQATDPHSIAERLRREKISDRMKNLQDLVPNSNK-ADKASMLDEIIDYVKFLQLQ 375
Query: 409 VEFLSM-KLASVNTRLELNVDALMSKDIYQPNKPLPHSIFQ-IDSSASAFFSHQ 460
V+ LSM ++ + L L + SK +PLP + +DS S F +
Sbjct: 376 VKVLSMSRVGAPGAVLPLLTE---SKTEGYHGQPLPQGLLDALDSEDSFVFEEE 426
>gi|227345480|gb|ACP28172.1| roothairless1/slippery [Lotus japonicus]
Length = 386
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 48/66 (72%), Positives = 56/66 (84%), Gaps = 1/66 (1%)
Query: 349 VRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQ 408
VRARRGQATD HS+AER+RRE+I+ERMK LQ+LVP NK T KA MLDEII+YV+ LQ Q
Sbjct: 174 VRARRGQATDPHSIAERLRRERIAERMKALQELVPNANK-TDKASMLDEIIDYVKFLQLQ 232
Query: 409 VEFLSM 414
V+ LSM
Sbjct: 233 VKVLSM 238
>gi|356564915|ref|XP_003550692.1| PREDICTED: transcription factor bHLH69-like [Glycine max]
Length = 369
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 48/66 (72%), Positives = 56/66 (84%), Gaps = 1/66 (1%)
Query: 349 VRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQ 408
VRARRGQATD HS+AER+RRE+I+ERMK LQ+LVP NK T KA MLDEII+YV+ LQ Q
Sbjct: 197 VRARRGQATDPHSIAERLRRERIAERMKALQELVPNANK-TDKASMLDEIIDYVKFLQLQ 255
Query: 409 VEFLSM 414
V+ LSM
Sbjct: 256 VKVLSM 261
>gi|449457905|ref|XP_004146688.1| PREDICTED: uncharacterized protein LOC101211609 [Cucumis sativus]
gi|449529094|ref|XP_004171536.1| PREDICTED: uncharacterized protein LOC101228749 [Cucumis sativus]
Length = 422
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 48/66 (72%), Positives = 56/66 (84%), Gaps = 1/66 (1%)
Query: 349 VRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQ 408
VRARRGQATD HS+AER+RRE+I+ERMK LQ+LVP NK T KA MLDEII+YV+ LQ Q
Sbjct: 204 VRARRGQATDPHSIAERLRRERIAERMKALQELVPNANK-TDKASMLDEIIDYVKFLQLQ 262
Query: 409 VEFLSM 414
V+ LSM
Sbjct: 263 VKVLSM 268
>gi|242095026|ref|XP_002438003.1| hypothetical protein SORBIDRAFT_10g006250 [Sorghum bicolor]
gi|241916226|gb|EER89370.1| hypothetical protein SORBIDRAFT_10g006250 [Sorghum bicolor]
Length = 489
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 49/66 (74%), Positives = 55/66 (83%), Gaps = 1/66 (1%)
Query: 349 VRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQ 408
VRARRGQATD HS+AER+RREKIS+RMK LQDLVP NK KA MLDEII+YV+ LQ Q
Sbjct: 320 VRARRGQATDPHSIAERLRREKISDRMKSLQDLVPNSNKAD-KASMLDEIIDYVKFLQLQ 378
Query: 409 VEFLSM 414
V+ LSM
Sbjct: 379 VKVLSM 384
>gi|125554388|gb|EAY99993.1| hypothetical protein OsI_21996 [Oryza sativa Indica Group]
Length = 477
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 53/79 (67%), Positives = 58/79 (73%), Gaps = 9/79 (11%)
Query: 336 NAKPPEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALML 395
NAKP RARRGQATD HS+AER+RREKISERMK LQDLVP NK KA ML
Sbjct: 310 NAKP--------RTRARRGQATDPHSIAERLRREKISERMKNLQDLVPNSNKAD-KASML 360
Query: 396 DEIINYVQSLQRQVEFLSM 414
DEII+YV+ LQ QV+ LSM
Sbjct: 361 DEIIDYVKFLQLQVKVLSM 379
>gi|212724016|ref|NP_001131264.1| uncharacterized protein LOC100192577 [Zea mays]
gi|194691028|gb|ACF79598.1| unknown [Zea mays]
gi|323388613|gb|ADX60111.1| bHLH transcription factor [Zea mays]
Length = 438
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/114 (52%), Positives = 74/114 (64%), Gaps = 6/114 (5%)
Query: 349 VRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQ 408
VRARRGQATD HS+AER+RREKIS+RMK LQDLVP NK KA MLDEII+YV+ LQ Q
Sbjct: 282 VRARRGQATDPHSIAERLRREKISDRMKNLQDLVPNSNK-ADKASMLDEIIDYVKFLQLQ 340
Query: 409 VEFLSM-KLASVNTRLELNVDALMSKDIYQPNKPLPHSIFQ-IDSSASAFFSHQ 460
V+ LSM ++ + L L + SK +PLP + +DS S F +
Sbjct: 341 VKVLSMSRVGAPGAVLPLLTE---SKTEGYHGQPLPQGLLDALDSEDSFVFEEE 391
>gi|357137415|ref|XP_003570296.1| PREDICTED: uncharacterized protein LOC100827783 [Brachypodium
distachyon]
Length = 351
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 48/66 (72%), Positives = 56/66 (84%), Gaps = 1/66 (1%)
Query: 349 VRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQ 408
VRARRGQATD HS+AER+RRE+I+ERMK LQ+LVP NK T KA MLDEII+YV+ LQ Q
Sbjct: 144 VRARRGQATDPHSIAERLRRERIAERMKALQELVPSANK-TDKASMLDEIIDYVKFLQVQ 202
Query: 409 VEFLSM 414
V+ LSM
Sbjct: 203 VKVLSM 208
>gi|414589493|tpg|DAA40064.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 471
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 49/73 (67%), Positives = 59/73 (80%), Gaps = 3/73 (4%)
Query: 342 PPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINY 401
PP+ VRARRGQATD HS+AER+RRE+I+ERMK LQ+LVP NK T KA MLDEI++Y
Sbjct: 235 PPRQ--RVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANK-TDKASMLDEIVDY 291
Query: 402 VQSLQRQVEFLSM 414
V+ LQ QV+ LSM
Sbjct: 292 VKFLQLQVKVLSM 304
>gi|226496023|ref|NP_001141950.1| uncharacterized protein LOC100274099 [Zea mays]
gi|223945379|gb|ACN26773.1| unknown [Zea mays]
gi|414589494|tpg|DAA40065.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 470
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 49/73 (67%), Positives = 59/73 (80%), Gaps = 3/73 (4%)
Query: 342 PPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINY 401
PP+ VRARRGQATD HS+AER+RRE+I+ERMK LQ+LVP NK T KA MLDEI++Y
Sbjct: 234 PPRQ--RVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANK-TDKASMLDEIVDY 290
Query: 402 VQSLQRQVEFLSM 414
V+ LQ QV+ LSM
Sbjct: 291 VKFLQLQVKVLSM 303
>gi|55773907|dbj|BAD72512.1| bHLH transcription factor PTF1-like [Oryza sativa Japonica Group]
Length = 420
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 50/73 (68%), Positives = 59/73 (80%), Gaps = 2/73 (2%)
Query: 342 PPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINY 401
PP+ VRARRGQATD HS+AER+RRE+I+ERMK LQ+LVP NK T KA MLDEII+Y
Sbjct: 198 PPRQQ-RVRARRGQATDPHSIAERLRRERIAERMKSLQELVPNANK-TDKASMLDEIIDY 255
Query: 402 VQSLQRQVEFLSM 414
V+ LQ QV+ LSM
Sbjct: 256 VKFLQLQVKVLSM 268
>gi|218197712|gb|EEC80139.1| hypothetical protein OsI_21931 [Oryza sativa Indica Group]
Length = 420
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 50/73 (68%), Positives = 59/73 (80%), Gaps = 2/73 (2%)
Query: 342 PPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINY 401
PP+ VRARRGQATD HS+AER+RRE+I+ERMK LQ+LVP NK T KA MLDEII+Y
Sbjct: 198 PPRQQ-RVRARRGQATDPHSIAERLRRERIAERMKSLQELVPNANK-TDKASMLDEIIDY 255
Query: 402 VQSLQRQVEFLSM 414
V+ LQ QV+ LSM
Sbjct: 256 VKFLQLQVKVLSM 268
>gi|194696204|gb|ACF82186.1| unknown [Zea mays]
gi|414883772|tpg|DAA59786.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 193
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 51/94 (54%), Positives = 67/94 (71%), Gaps = 2/94 (2%)
Query: 340 PEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEII 399
P+PP VRARRGQATD HS+AER+RRE+I+ERM+ LQ+LVP NK T +A MLDEI+
Sbjct: 15 PQPPAPRPKVRARRGQATDPHSIAERLRRERIAERMRALQELVPNTNK-TDRAAMLDEIL 73
Query: 400 NYVQSLQRQVEFLSM-KLASVNTRLELNVDALMS 432
+YV+ L+ QV+ LSM +L +L D +S
Sbjct: 74 DYVKFLRLQVKVLSMSRLGGAGAVAQLVADIPLS 107
>gi|302764076|ref|XP_002965459.1| hypothetical protein SELMODRAFT_24892 [Selaginella moellendorffii]
gi|302825088|ref|XP_002994179.1| hypothetical protein SELMODRAFT_24890 [Selaginella moellendorffii]
gi|300137980|gb|EFJ04769.1| hypothetical protein SELMODRAFT_24890 [Selaginella moellendorffii]
gi|300166273|gb|EFJ32879.1| hypothetical protein SELMODRAFT_24892 [Selaginella moellendorffii]
Length = 143
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 48/67 (71%), Positives = 56/67 (83%), Gaps = 1/67 (1%)
Query: 348 HVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQR 407
VRARRGQATD HS+AER+RRE+I+ERMK LQDLVP NK T KA MLDEI++YV+ LQ
Sbjct: 3 RVRARRGQATDPHSIAERLRRERIAERMKALQDLVPNANK-TDKASMLDEIVDYVKFLQL 61
Query: 408 QVEFLSM 414
QV+ LSM
Sbjct: 62 QVKVLSM 68
>gi|195616290|gb|ACG29975.1| helix-loop-helix DNA-binding domain containing protein [Zea mays]
Length = 481
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 49/66 (74%), Positives = 55/66 (83%), Gaps = 1/66 (1%)
Query: 349 VRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQ 408
VRARRGQATD HS+AER+RREKIS+RMK LQDLVP NK KA MLDEII+YV+ LQ Q
Sbjct: 320 VRARRGQATDPHSIAERLRREKISDRMKNLQDLVPNSNK-ADKASMLDEIIDYVKFLQLQ 378
Query: 409 VEFLSM 414
V+ LSM
Sbjct: 379 VKVLSM 384
>gi|162460249|ref|NP_001105867.1| bHLH transcription factor PTF1 [Zea mays]
gi|93359745|gb|ABF13333.1| bHLH transcription factor PTF1 [Zea mays]
Length = 481
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 49/66 (74%), Positives = 55/66 (83%), Gaps = 1/66 (1%)
Query: 349 VRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQ 408
VRARRGQATD HS+AER+RREKIS+RMK LQDLVP NK KA MLDEII+YV+ LQ Q
Sbjct: 320 VRARRGQATDPHSIAERLRREKISDRMKNLQDLVPNSNK-ADKASMLDEIIDYVKFLQLQ 378
Query: 409 VEFLSM 414
V+ LSM
Sbjct: 379 VKVLSM 384
>gi|323388949|gb|ADX60279.1| bHLH transcription factor [Oryza sativa Japonica Group]
Length = 294
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 50/94 (53%), Positives = 67/94 (71%), Gaps = 2/94 (2%)
Query: 340 PEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEII 399
P+PP VRARRGQATD HS+AER+RRE+I+ERM+ LQ+LVP NK T +A MLDEI+
Sbjct: 124 PQPPAPRPKVRARRGQATDPHSIAERLRRERIAERMRALQELVPNTNK-TDRAAMLDEIL 182
Query: 400 NYVQSLQRQVEFLSM-KLASVNTRLELNVDALMS 432
+YV+ L+ QV+ LS+ +L +L D +S
Sbjct: 183 DYVKFLRLQVKVLSISRLGGAGAVAQLVADIPLS 216
>gi|223702396|gb|ACN21629.1| putative basic helix-loop-helix protein BHLH2 [Lotus japonicus]
gi|388506732|gb|AFK41432.1| unknown [Lotus japonicus]
Length = 342
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 52/100 (52%), Positives = 69/100 (69%), Gaps = 2/100 (2%)
Query: 334 ANNAKPPEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKAL 393
A+NA PP VRARRGQATD HS+AER+RRE+I+ERM+ LQ+LVP NK + +A
Sbjct: 165 ASNAHMQHPPGIRPRVRARRGQATDPHSIAERLRRERIAERMRALQELVPSINK-SDRAA 223
Query: 394 MLDEIINYVQSLQRQVEFLSM-KLASVNTRLELNVDALMS 432
MLDEI++YV+ L+ QV+ LSM +L +L D +S
Sbjct: 224 MLDEIVDYVKFLRLQVKVLSMSRLGGAGAVAQLVADVPLS 263
>gi|297798868|ref|XP_002867318.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297313154|gb|EFH43577.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 308
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 48/66 (72%), Positives = 56/66 (84%), Gaps = 1/66 (1%)
Query: 349 VRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQ 408
VRARRGQATD HS+AER+RRE+I+ERMK LQ+LVP NK T KA MLDEII+YV+ LQ Q
Sbjct: 128 VRARRGQATDPHSIAERLRRERIAERMKSLQELVPNGNK-TDKASMLDEIIDYVKFLQLQ 186
Query: 409 VEFLSM 414
V+ LSM
Sbjct: 187 VKVLSM 192
>gi|449443257|ref|XP_004139396.1| PREDICTED: transcription factor bHLH66-like [Cucumis sativus]
gi|449523179|ref|XP_004168602.1| PREDICTED: transcription factor bHLH66-like [Cucumis sativus]
Length = 421
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 47/67 (70%), Positives = 56/67 (83%), Gaps = 1/67 (1%)
Query: 348 HVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQR 407
VRARRGQATD HS+AER+RRE+I+ERMK LQ+LVP NK T KA MLDEII+YV+ LQ
Sbjct: 216 RVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANK-TDKASMLDEIIDYVKFLQL 274
Query: 408 QVEFLSM 414
QV+ LS+
Sbjct: 275 QVKVLSV 281
>gi|46390356|dbj|BAD15821.1| putative bHLH transcription factor PTF1 [Oryza sativa Japonica
Group]
gi|215768923|dbj|BAH01152.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222623080|gb|EEE57212.1| hypothetical protein OsJ_07173 [Oryza sativa Japonica Group]
Length = 524
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 49/66 (74%), Positives = 56/66 (84%), Gaps = 1/66 (1%)
Query: 349 VRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQ 408
VRARRGQATD HS+AER+RREKIS+RMK LQ+LVP NK T KA MLDEII+YV+ LQ Q
Sbjct: 314 VRARRGQATDPHSIAERLRREKISDRMKDLQELVPNSNK-TNKASMLDEIIDYVKFLQLQ 372
Query: 409 VEFLSM 414
V+ LSM
Sbjct: 373 VKVLSM 378
>gi|413968542|gb|AFW90608.1| beta-fructofuranosidase protein [Solanum tuberosum]
Length = 298
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 49/90 (54%), Positives = 66/90 (73%), Gaps = 2/90 (2%)
Query: 340 PEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEII 399
P P + VRARRGQATD HS+AER+RRE+ISER+K LQ+LVP CNK T +A ++DEI+
Sbjct: 125 PHQPAIHPRVRARRGQATDPHSIAERLRRERISERIKALQELVPNCNK-TDRAALVDEIL 183
Query: 400 NYVQSLQRQVEFLSM-KLASVNTRLELNVD 428
+YV+ L+ QV+ LSM +L + +L D
Sbjct: 184 DYVKFLRLQVKVLSMSRLGGTSAVAQLVTD 213
>gi|125539931|gb|EAY86326.1| hypothetical protein OsI_07700 [Oryza sativa Indica Group]
Length = 524
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 49/66 (74%), Positives = 56/66 (84%), Gaps = 1/66 (1%)
Query: 349 VRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQ 408
VRARRGQATD HS+AER+RREKIS+RMK LQ+LVP NK T KA MLDEII+YV+ LQ Q
Sbjct: 314 VRARRGQATDPHSIAERLRREKISDRMKDLQELVPNSNK-TNKASMLDEIIDYVKFLQLQ 372
Query: 409 VEFLSM 414
V+ LSM
Sbjct: 373 VKVLSM 378
>gi|359484248|ref|XP_002277344.2| PREDICTED: uncharacterized protein LOC100257707 [Vitis vinifera]
Length = 536
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 52/83 (62%), Positives = 61/83 (73%), Gaps = 2/83 (2%)
Query: 348 HVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQR 407
VRARRGQATD HS+AER+RREKI+ERMK LQ+LVP NK T KA MLDEII YV+ LQ
Sbjct: 295 RVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIEYVKFLQL 353
Query: 408 QVEFLSM-KLASVNTRLELNVDA 429
QV+ LSM +L + + L D
Sbjct: 354 QVKVLSMSRLGAAEAVVPLITDG 376
>gi|356576702|ref|XP_003556469.1| PREDICTED: transcription factor UNE12-like [Glycine max]
Length = 331
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 51/93 (54%), Positives = 66/93 (70%), Gaps = 2/93 (2%)
Query: 341 EPPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIIN 400
+PP VRARRGQATD HS+AER+RRE+I+ERMK LQ+LVP NK T +A MLDEI++
Sbjct: 161 QPPGIRPRVRARRGQATDPHSIAERLRRERIAERMKALQELVPSINK-TDRAAMLDEIVD 219
Query: 401 YVQSLQRQVEFLSM-KLASVNTRLELNVDALMS 432
YV+ L+ QV+ LSM +L +L D +S
Sbjct: 220 YVKFLRLQVKVLSMSRLGGAGAVAQLVADVPLS 252
>gi|115345831|gb|ABI95371.1| PTF1 [Triticum aestivum]
Length = 480
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 113/330 (34%), Positives = 150/330 (45%), Gaps = 83/330 (25%)
Query: 123 NNGSSSTNA------SCYTTP------LNSPPKLNLPMSLGNSMPLNSS-VAEFSADPGF 169
NNGS +N C +TP L++P L LP +L +S+ N S V+ F AD
Sbjct: 99 NNGSLQSNLIPPGTLQCTSTPGTFDLQLDTPGLLELPHALSSSIESNGSEVSAFLADVHA 158
Query: 170 AERAARFSRFGSRSFNGRSTGQFVPNH---------------NPDQFG-LSRSNNNPNPM 213
A+ ST Q VP++ N F S SN N +
Sbjct: 159 VSSASTLC----------STFQNVPSYMEPVSLEAFSFQGIQNAAMFNNTSHSNGN---L 205
Query: 214 TANEKLPRVSSSPSLKVLGSQAQATGNKSPQDRSELANS-----QEESSVSEQVPNDFNS 268
+ ++ S S + L + G ++S+LA S Q+E + +P F S
Sbjct: 206 SVFDEATMASLHDSKEFLSGSISSFGTA---EQSQLAGSGLKAEQQEQNAMCNIPLPFAS 262
Query: 269 RKRKAVSKGKGKETAASPSVNNTTKVAEANASES----SKNKRCKPNEGKANGNGAVKAE 324
+ AVS+ +G A PS ++T N SE S + + ANGN A
Sbjct: 263 GSQMAVSEAQG---AMIPSKISSTM--HNNKSEYPVPISHSADAQNKANSANGNSA---- 313
Query: 325 DEGDDKQAKANNAKPPEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPG 384
+AKP RARRGQATD HS+AER+RREKISERMK LQDLVP
Sbjct: 314 -----------SAKP--------RARARRGQATDPHSIAERLRREKISERMKNLQDLVPN 354
Query: 385 CNKVTGKALMLDEIINYVQSLQRQVEFLSM 414
NK K+ MLDEII+YV+ LQ QV+ L M
Sbjct: 355 SNKAD-KSSMLDEIIDYVKFLQLQVKVLCM 383
>gi|295913203|gb|ADG57860.1| transcription factor [Lycoris longituba]
Length = 204
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 48/67 (71%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Query: 348 HVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQR 407
VRARRGQATD HS+AER+RRE+I+ERMK LQ+LVP NK T KA MLDEII YV+ LQ
Sbjct: 29 RVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANK-TDKASMLDEIIGYVKFLQL 87
Query: 408 QVEFLSM 414
QV+ LSM
Sbjct: 88 QVKVLSM 94
>gi|147836162|emb|CAN75431.1| hypothetical protein VITISV_021146 [Vitis vinifera]
Length = 486
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 53/100 (53%), Positives = 68/100 (68%), Gaps = 5/100 (5%)
Query: 319 GAVKAEDEGDDK----QAKANNAKPPEPPKDYIHVRARRGQATDSHSLAERVRREKISER 374
G+++A++ G Q A + P + VRARRGQAT HS+AER+RRE+I+ER
Sbjct: 226 GSMQAQNYGAPATVMNQTPATGSAGGAPAQPRQRVRARRGQATHPHSIAERLRRERIAER 285
Query: 375 MKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSM 414
MK LQ+LVP NK T KA MLDEII+YV+ LQ QV+ LSM
Sbjct: 286 MKALQELVPNANK-TDKASMLDEIIDYVKFLQLQVKVLSM 324
>gi|297738502|emb|CBI27747.3| unnamed protein product [Vitis vinifera]
Length = 389
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 52/83 (62%), Positives = 61/83 (73%), Gaps = 2/83 (2%)
Query: 348 HVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQR 407
VRARRGQATD HS+AER+RREKI+ERMK LQ+LVP NK T KA MLDEII YV+ LQ
Sbjct: 148 RVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIEYVKFLQL 206
Query: 408 QVEFLSM-KLASVNTRLELNVDA 429
QV+ LSM +L + + L D
Sbjct: 207 QVKVLSMSRLGAAEAVVPLITDG 229
>gi|356535169|ref|XP_003536121.1| PREDICTED: transcription factor UNE12-like [Glycine max]
Length = 328
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 51/93 (54%), Positives = 66/93 (70%), Gaps = 2/93 (2%)
Query: 341 EPPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIIN 400
+PP VRARRGQATD HS+AER+RRE+I+ERMK LQ+LVP NK T +A MLDEI++
Sbjct: 158 QPPGIRPRVRARRGQATDPHSIAERLRRERIAERMKALQELVPSINK-TDRAAMLDEIVD 216
Query: 401 YVQSLQRQVEFLSM-KLASVNTRLELNVDALMS 432
YV+ L+ QV+ LSM +L +L D +S
Sbjct: 217 YVKFLRLQVKVLSMSRLGGAGAVAQLVADVPLS 249
>gi|255580949|ref|XP_002531293.1| conserved hypothetical protein [Ricinus communis]
gi|223529126|gb|EEF31106.1| conserved hypothetical protein [Ricinus communis]
Length = 326
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 49/90 (54%), Positives = 65/90 (72%), Gaps = 2/90 (2%)
Query: 341 EPPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIIN 400
+PP VRARRGQATD HS+AER+RRE+I+ERMK LQ+LVP NK T +A M+DEI++
Sbjct: 155 QPPAIRPRVRARRGQATDPHSIAERLRRERIAERMKALQELVPTANK-TDRAAMIDEIVD 213
Query: 401 YVQSLQRQVEFLSM-KLASVNTRLELNVDA 429
YV+ L+ QV+ LSM +L + +L D
Sbjct: 214 YVKFLRLQVKVLSMSRLGAAGAVAQLVADV 243
>gi|15242922|ref|NP_200609.1| transcription factor bHLH82 [Arabidopsis thaliana]
gi|75311535|sp|Q9LSQ3.1|BH082_ARATH RecName: Full=Transcription factor bHLH82; AltName: Full=Basic
helix-loop-helix protein 82; Short=AtbHLH82; Short=bHLH
82; AltName: Full=Transcription factor EN 96; AltName:
Full=bHLH transcription factor bHLH082
gi|8885595|dbj|BAA97525.1| unnamed protein product [Arabidopsis thaliana]
gi|332009604|gb|AED96987.1| transcription factor bHLH82 [Arabidopsis thaliana]
Length = 297
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 48/67 (71%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Query: 348 HVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQR 407
VRARRGQATD HS+AER+RRE+I+ERMK LQ+LVP NK T KA MLDEII YV+ LQ
Sbjct: 98 RVRARRGQATDPHSIAERLRRERIAERMKSLQELVPNTNK-TDKASMLDEIIEYVRFLQL 156
Query: 408 QVEFLSM 414
QV+ LSM
Sbjct: 157 QVKVLSM 163
>gi|388509910|gb|AFK43021.1| unknown [Medicago truncatula]
Length = 102
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 46/63 (73%), Positives = 53/63 (84%)
Query: 375 MKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMKLASVNTRLELNVDALMSKD 434
MK+LQDLVPGCNKV GKAL+LDEIINY+QSLQRQVEFLSMKL +VN+RL ++A KD
Sbjct: 1 MKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRLNTGIEASPPKD 60
Query: 435 IYQ 437
Q
Sbjct: 61 YGQ 63
>gi|297796719|ref|XP_002866244.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297312079|gb|EFH42503.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 297
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 48/67 (71%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Query: 348 HVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQR 407
VRARRGQATD HS+AER+RRE+I+ERMK LQ+LVP NK T KA MLDEII YV+ LQ
Sbjct: 98 RVRARRGQATDPHSIAERLRRERIAERMKSLQELVPNTNK-TDKASMLDEIIEYVRFLQL 156
Query: 408 QVEFLSM 414
QV+ LSM
Sbjct: 157 QVKVLSM 163
>gi|293336149|ref|NP_001169231.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
gi|223975699|gb|ACN32037.1| unknown [Zea mays]
gi|414885895|tpg|DAA61909.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 332
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 83/239 (34%), Positives = 111/239 (46%), Gaps = 37/239 (15%)
Query: 156 LNSSVAEFSADPGFAERAARFSRFGSRSFNGRSTGQFVP-NHNPDQFGLSRS-----NNN 209
L +A F D GF ERAAR S FG G +H P S S ++
Sbjct: 85 LPQGLAHFPVDSGFIERAARASCFGGGGGGGVMAAFGAAADHQPMNSAFSGSSEALLDHQ 144
Query: 210 PNPMTANEKLPRVSSSPSLKVLGSQAQATGNKSPQDRSELANSQEESSVSEQVPNDFNSR 269
+++ P + + VL S+A A G+ S + S+ S + PN+
Sbjct: 145 RTKDGSDKGEPELGRNGHDGVLSSEAAAAGDCSSKGTSD--------SKKRRRPNE---- 192
Query: 270 KRKAVSKGKGKETAASPSVNNTTKVAEANASESSKNKRCKPNEGKANGNGAVKAEDEGDD 329
V G +++ P+ + V + E S GK+ G GA + +
Sbjct: 193 ----VMGGDQVQSSNLPADSANESVHSKDKGEESSLATTTTGPGKSKGKGARETSES--- 245
Query: 330 KQAKANNAKPPEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKV 388
+DYIHVRARRGQAT+SHSLAER+RREKISERMKLLQDLVPGC+KV
Sbjct: 246 ------------QKEDYIHVRARRGQATNSHSLAERLRREKISERMKLLQDLVPGCSKV 292
>gi|194688984|gb|ACF78576.1| unknown [Zea mays]
gi|238014612|gb|ACR38341.1| unknown [Zea mays]
gi|413952840|gb|AFW85489.1| pi starvation-induced transcription factor1 [Zea mays]
Length = 481
Score = 95.1 bits (235), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 48/66 (72%), Positives = 55/66 (83%), Gaps = 1/66 (1%)
Query: 349 VRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQ 408
VRARRGQATD HS+AER+RREKIS+RMK LQDLVP NK KA MLDEII++V+ LQ Q
Sbjct: 320 VRARRGQATDPHSIAERLRREKISDRMKNLQDLVPNSNK-ADKASMLDEIIDHVKFLQLQ 378
Query: 409 VEFLSM 414
V+ LSM
Sbjct: 379 VKVLSM 384
>gi|222636553|gb|EEE66685.1| hypothetical protein OsJ_23336 [Oryza sativa Japonica Group]
Length = 342
Score = 95.1 bits (235), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 48/81 (59%), Positives = 61/81 (75%), Gaps = 2/81 (2%)
Query: 349 VRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQ 408
VRARRGQATD HS+AER+RRE+I+ERM+ LQDLVP NK T +A MLDEI++YV+ L+ Q
Sbjct: 181 VRARRGQATDPHSIAERLRRERIAERMRALQDLVPNTNK-TDRAAMLDEILDYVKFLRLQ 239
Query: 409 VEFLSM-KLASVNTRLELNVD 428
V+ LSM +L +L D
Sbjct: 240 VKVLSMSRLGGAGAVAQLVAD 260
>gi|125557459|gb|EAZ02995.1| hypothetical protein OsI_25136 [Oryza sativa Indica Group]
Length = 293
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 48/81 (59%), Positives = 61/81 (75%), Gaps = 2/81 (2%)
Query: 349 VRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQ 408
VRARRGQATD HS+AER+RRE+I+ERM+ LQDLVP NK T +A MLDEI++YV+ L+ Q
Sbjct: 132 VRARRGQATDPHSIAERLRRERIAERMRALQDLVPNTNK-TDRAAMLDEILDYVKFLRLQ 190
Query: 409 VEFLSM-KLASVNTRLELNVD 428
V+ LSM +L +L D
Sbjct: 191 VKVLSMSRLGGAGAVAQLVAD 211
>gi|224068580|ref|XP_002326150.1| predicted protein [Populus trichocarpa]
gi|222833343|gb|EEE71820.1| predicted protein [Populus trichocarpa]
Length = 456
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 51/83 (61%), Positives = 60/83 (72%), Gaps = 2/83 (2%)
Query: 348 HVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQR 407
VRARRG ATD HS+AER+RREKI+ERMK LQ+LVP NKV KA MLDEII YV+ LQ
Sbjct: 239 RVRARRGHATDPHSIAERLRREKIAERMKNLQELVPNSNKVD-KASMLDEIIEYVKFLQL 297
Query: 408 QVEFLSM-KLASVNTRLELNVDA 429
QV+ LSM +L + + L D
Sbjct: 298 QVKVLSMSRLGAAGAVIPLLTDG 320
>gi|413937342|gb|AFW71893.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 489
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 48/67 (71%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Query: 348 HVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQR 407
VRARRGQATD HS+AER+RREKIS+RMK LQ+LVP N+ T KA MLDEII YV+ LQ
Sbjct: 297 RVRARRGQATDPHSIAERLRREKISDRMKNLQELVPNSNR-TDKASMLDEIIEYVKFLQL 355
Query: 408 QVEFLSM 414
QV+ LSM
Sbjct: 356 QVKVLSM 362
>gi|194396125|gb|ACF60480.1| bHLH transcription factor [Oryza sativa Japonica Group]
Length = 478
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 52/79 (65%), Positives = 57/79 (72%), Gaps = 9/79 (11%)
Query: 336 NAKPPEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALML 395
NAKP RARRGQATD HS+AER+RREKISERMK LQ LVP NK KA ML
Sbjct: 311 NAKP--------RTRARRGQATDPHSIAERLRREKISERMKNLQVLVPNSNKAD-KASML 361
Query: 396 DEIINYVQSLQRQVEFLSM 414
DEII+YV+ LQ QV+ LSM
Sbjct: 362 DEIIDYVKFLQLQVKVLSM 380
>gi|115466888|ref|NP_001057043.1| Os06g0193400 [Oryza sativa Japonica Group]
gi|51090797|dbj|BAD35275.1| bHLH transcription factor PTF1 [Oryza sativa Japonica Group]
gi|113595083|dbj|BAF18957.1| Os06g0193400 [Oryza sativa Japonica Group]
gi|125596339|gb|EAZ36119.1| hypothetical protein OsJ_20430 [Oryza sativa Japonica Group]
gi|215686762|dbj|BAG89612.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 478
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 52/79 (65%), Positives = 57/79 (72%), Gaps = 9/79 (11%)
Query: 336 NAKPPEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALML 395
NAKP RARRGQATD HS+AER+RREKISERMK LQ LVP NK KA ML
Sbjct: 311 NAKP--------RTRARRGQATDPHSIAERLRREKISERMKNLQVLVPNSNKAD-KASML 361
Query: 396 DEIINYVQSLQRQVEFLSM 414
DEII+YV+ LQ QV+ LSM
Sbjct: 362 DEIIDYVKFLQLQVKVLSM 380
>gi|29424047|gb|AAO73566.1| bHLH transcription factor PTF1 [Oryza sativa]
Length = 478
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 52/79 (65%), Positives = 57/79 (72%), Gaps = 9/79 (11%)
Query: 336 NAKPPEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALML 395
NAKP RARRGQATD HS+AER+RREKISERMK LQ LVP NK KA ML
Sbjct: 311 NAKP--------RTRARRGQATDPHSIAERLRREKISERMKNLQVLVPNSNKAD-KASML 361
Query: 396 DEIINYVQSLQRQVEFLSM 414
DEII+YV+ LQ QV+ LSM
Sbjct: 362 DEIIDYVKFLQLQVKVLSM 380
>gi|51090798|dbj|BAD35276.1| putative bHLH transcription factor PTF1 [Oryza sativa Japonica
Group]
Length = 401
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 52/79 (65%), Positives = 57/79 (72%), Gaps = 9/79 (11%)
Query: 336 NAKPPEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALML 395
NAKP RARRGQATD HS+AER+RREKISERMK LQ LVP NK KA ML
Sbjct: 234 NAKP--------RTRARRGQATDPHSIAERLRREKISERMKNLQVLVPNSNKAD-KASML 284
Query: 396 DEIINYVQSLQRQVEFLSM 414
DEII+YV+ LQ QV+ LSM
Sbjct: 285 DEIIDYVKFLQLQVKVLSM 303
>gi|255550301|ref|XP_002516201.1| DNA-directed RNA polymerase beta chain, putative [Ricinus communis]
gi|223544687|gb|EEF46203.1| DNA-directed RNA polymerase beta chain, putative [Ricinus communis]
Length = 592
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 51/83 (61%), Positives = 61/83 (73%), Gaps = 2/83 (2%)
Query: 348 HVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQR 407
VRARRGQATD HS+AER+RREKI+ERMK LQ+LVP +KV KA MLDEII YV+ LQ
Sbjct: 350 RVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSSKVD-KASMLDEIIEYVKFLQL 408
Query: 408 QVEFLSM-KLASVNTRLELNVDA 429
QV+ LSM +L + + L D
Sbjct: 409 QVKVLSMSRLGATGAVIPLITDG 431
>gi|226492543|ref|NP_001151181.1| LOC100284814 [Zea mays]
gi|195644858|gb|ACG41897.1| BHLH transcription factor [Zea mays]
Length = 390
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/65 (70%), Positives = 55/65 (84%), Gaps = 1/65 (1%)
Query: 350 RARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQV 409
RA+RGQATD HS+AER+RRE+I+ERMK LQ+LVP NK T KA MLDEII+YV+ LQ QV
Sbjct: 189 RAKRGQATDPHSIAERLRRERIAERMKALQELVPNANK-TDKASMLDEIIDYVKFLQLQV 247
Query: 410 EFLSM 414
+ LSM
Sbjct: 248 KVLSM 252
>gi|357124947|ref|XP_003564158.1| PREDICTED: uncharacterized protein LOC100841109 [Brachypodium
distachyon]
Length = 482
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/65 (72%), Positives = 54/65 (83%), Gaps = 1/65 (1%)
Query: 350 RARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQV 409
RARRGQATD HS+AER+RREKISERMK LQ+LVP NK K+ MLDEII+YV+ LQ QV
Sbjct: 322 RARRGQATDPHSIAERLRREKISERMKNLQELVPNSNKAD-KSSMLDEIIDYVKFLQLQV 380
Query: 410 EFLSM 414
+ LSM
Sbjct: 381 KVLSM 385
>gi|357119229|ref|XP_003561348.1| PREDICTED: transcription factor UNE12-like [Brachypodium
distachyon]
Length = 288
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 50/96 (52%), Positives = 67/96 (69%), Gaps = 2/96 (2%)
Query: 338 KPPEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDE 397
+P +PP RARRGQATD HS+AER+RRE+I+ERM+ LQ+LVP NK T +A MLDE
Sbjct: 115 QPHQPPAPRPKQRARRGQATDPHSIAERLRRERIAERMRALQELVPNTNK-TDRAAMLDE 173
Query: 398 IINYVQSLQRQVEFLSM-KLASVNTRLELNVDALMS 432
I++YV+ L+ QV+ LSM +L +L D +S
Sbjct: 174 ILDYVKFLRLQVKVLSMSRLGGAGAVAQLIADIPLS 209
>gi|242063376|ref|XP_002452977.1| hypothetical protein SORBIDRAFT_04g035890 [Sorghum bicolor]
gi|241932808|gb|EES05953.1| hypothetical protein SORBIDRAFT_04g035890 [Sorghum bicolor]
Length = 393
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/65 (70%), Positives = 55/65 (84%), Gaps = 1/65 (1%)
Query: 350 RARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQV 409
RA+RGQATD HS+AER+RRE+I+ERMK LQ+LVP NK T KA MLDEII+YV+ LQ QV
Sbjct: 196 RAKRGQATDPHSIAERLRRERIAERMKALQELVPNANK-TDKASMLDEIIDYVKFLQLQV 254
Query: 410 EFLSM 414
+ LSM
Sbjct: 255 KVLSM 259
>gi|413952903|gb|AFW85552.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 391
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 46/65 (70%), Positives = 55/65 (84%), Gaps = 1/65 (1%)
Query: 350 RARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQV 409
RA+RGQATD HS+AER+RRE+I+ERMK LQ+LVP NK T KA MLDEII+YV+ LQ QV
Sbjct: 195 RAKRGQATDPHSIAERLRRERIAERMKSLQELVPNANK-TDKASMLDEIIDYVRFLQLQV 253
Query: 410 EFLSM 414
+ LSM
Sbjct: 254 KVLSM 258
>gi|326505424|dbj|BAJ95383.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 199
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 40/59 (67%), Positives = 52/59 (88%)
Query: 331 QAKANNAKPPEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVT 389
Q+K +++ ++Y+H+RA+RGQAT+SHSLAER+RR+KISERMKLLQDLVPGCNKVT
Sbjct: 120 QSKEDSSDGDGTKENYVHLRAKRGQATNSHSLAERLRRKKISERMKLLQDLVPGCNKVT 178
>gi|413951547|gb|AFW84196.1| putative HLH DNA-binding domain superfamily protein, partial [Zea
mays]
Length = 236
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 45/60 (75%), Positives = 52/60 (86%), Gaps = 2/60 (3%)
Query: 378 LQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMKLASVNTRLELNV--DALMSKDI 435
LQDLVPGCNKV GKA+MLDEIINYVQSLQRQVEFLSMKLA+VN +L+ N + L+ KD+
Sbjct: 121 LQDLVPGCNKVVGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPQLDFNSLPNLLLPKDV 180
>gi|357142621|ref|XP_003572635.1| PREDICTED: uncharacterized protein LOC100834217 [Brachypodium
distachyon]
Length = 479
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 49/82 (59%), Positives = 63/82 (76%), Gaps = 2/82 (2%)
Query: 349 VRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQ 408
VRARRGQATD HS+AER+RREKIS+RMK LQ+LVP NK T KA ML+EII Y++ LQ Q
Sbjct: 282 VRARRGQATDPHSIAERLRREKISDRMKNLQELVPNSNK-TDKASMLEEIIEYIKFLQLQ 340
Query: 409 VEFLSM-KLASVNTRLELNVDA 429
+ LSM +L + + + L +D+
Sbjct: 341 TKVLSMSRLGATDALVPLLMDS 362
>gi|225445889|ref|XP_002276403.1| PREDICTED: uncharacterized protein LOC100243222 [Vitis vinifera]
Length = 519
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 45/65 (69%), Positives = 52/65 (80%), Gaps = 5/65 (7%)
Query: 349 VRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKV-----TGKALMLDEIINYVQ 403
VRARRGQATD HS+AER+RRE+I+ERMK LQ+LVP NKV T KA MLDEII+YV+
Sbjct: 285 VRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKVIHPTLTDKASMLDEIIDYVK 344
Query: 404 SLQRQ 408
LQ Q
Sbjct: 345 FLQLQ 349
>gi|357153670|ref|XP_003576528.1| PREDICTED: uncharacterized protein LOC100826168 [Brachypodium
distachyon]
Length = 458
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/64 (70%), Positives = 53/64 (82%), Gaps = 2/64 (3%)
Query: 349 VRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKV--TGKALMLDEIINYVQSLQ 406
VRARRGQATD HS+AER+RRE+I+ERMK LQ+LVP NK T KA MLDEII+YV+ LQ
Sbjct: 238 VRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKWMQTDKASMLDEIIDYVKFLQ 297
Query: 407 RQVE 410
QV+
Sbjct: 298 LQVK 301
>gi|297726953|ref|NP_001175840.1| Os09g0417400 [Oryza sativa Japonica Group]
gi|50253024|dbj|BAD29274.1| bHLH transcription factor PTF1-like protein [Oryza sativa Japonica
Group]
gi|255678901|dbj|BAH94568.1| Os09g0417400 [Oryza sativa Japonica Group]
Length = 499
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 50/86 (58%), Positives = 63/86 (73%), Gaps = 10/86 (11%)
Query: 344 KDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKV--TGKALMLDEIINY 401
+ VRARRGQATD HS+AER+RRE+I+ERMK LQ+LVP NK+ T KA MLDEII+Y
Sbjct: 247 RQ--RVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKLMQTDKASMLDEIIDY 304
Query: 402 VQSLQRQVEFLSMKLASVNTRLELNV 427
V+ LQ QV+ AS T+L ++V
Sbjct: 305 VKFLQLQVK------ASTYTKLLIHV 324
>gi|218202150|gb|EEC84577.1| hypothetical protein OsI_31377 [Oryza sativa Indica Group]
Length = 414
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 50/84 (59%), Positives = 62/84 (73%), Gaps = 9/84 (10%)
Query: 344 KDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQ 403
+ VRARRGQATD HS+AER+RRE+I+ERMK LQ+LVP NK T KA MLDEII+YV+
Sbjct: 156 RQ--RVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANK-TDKASMLDEIIDYVK 212
Query: 404 SLQRQVEFLSMKLASVNTRLELNV 427
LQ QV+ AS T+L ++V
Sbjct: 213 FLQLQVK------ASTYTKLLIHV 230
>gi|414885459|tpg|DAA61473.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 344
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 49/73 (67%), Positives = 57/73 (78%), Gaps = 5/73 (6%)
Query: 342 PPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINY 401
PP+ VRARRGQATD HS+AER+RRE+I+ERMK LQ+LV NK T KA MLDEII+Y
Sbjct: 140 PPRQ--RVRARRGQATDPHSIAERLRRERIAERMKALQELVSNANK-TDKASMLDEIIDY 196
Query: 402 VQSLQRQVEFLSM 414
V+ LQ QV LSM
Sbjct: 197 VKFLQLQV--LSM 207
>gi|414885458|tpg|DAA61472.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 316
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 47/72 (65%), Positives = 56/72 (77%), Gaps = 3/72 (4%)
Query: 342 PPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINY 401
PP+ VRARRGQATD HS+AER+RRE+I+ERMK LQ+LV NK T KA MLDEII+Y
Sbjct: 112 PPRQ--RVRARRGQATDPHSIAERLRRERIAERMKALQELVSNANK-TDKASMLDEIIDY 168
Query: 402 VQSLQRQVEFLS 413
V+ LQ QV +S
Sbjct: 169 VKFLQLQVLSMS 180
>gi|255637743|gb|ACU19194.1| unknown [Glycine max]
Length = 156
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 47/75 (62%), Positives = 57/75 (76%), Gaps = 7/75 (9%)
Query: 375 MKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMKLASVN---TRLELNVDALM 431
MK LQ LVPGC+KVTGKAL+LDEIINYVQSLQ QVEFLSMKLA VN L +++D LM
Sbjct: 1 MKTLQRLVPGCDKVTGKALVLDEIINYVQSLQNQVEFLSMKLALVNPMFYDLAIDLDTLM 60
Query: 432 SKDIYQPNKPLPHSI 446
+ P++ L ++I
Sbjct: 61 VR----PDQKLNYNI 71
>gi|413937341|gb|AFW71892.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 425
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 46/66 (69%), Positives = 53/66 (80%), Gaps = 1/66 (1%)
Query: 348 HVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQR 407
VRARRGQATD HS+AER+RREKIS+RMK LQ+LVP N+ T KA MLDEII YV+ LQ
Sbjct: 297 RVRARRGQATDPHSIAERLRREKISDRMKNLQELVPNSNR-TDKASMLDEIIEYVKFLQL 355
Query: 408 QVEFLS 413
QV+ S
Sbjct: 356 QVKVRS 361
>gi|414865639|tpg|DAA44196.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 201
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 41/55 (74%), Positives = 48/55 (87%), Gaps = 2/55 (3%)
Query: 333 KANNAKPPEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNK 387
KA +A+ +DY+HVRA+RGQAT+SHSLAER RREKI+ERMKLLQDLVPGCNK
Sbjct: 140 KAGDARAKR--EDYVHVRAKRGQATNSHSLAERFRREKINERMKLLQDLVPGCNK 192
>gi|356527670|ref|XP_003532431.1| PREDICTED: transcription factor bHLH49-like [Glycine max]
Length = 156
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/75 (62%), Positives = 57/75 (76%), Gaps = 7/75 (9%)
Query: 375 MKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMKLASVN---TRLELNVDALM 431
MK LQ LVPGC+KVTGKAL+LDEIINYVQSLQ QVEFLSMKLA VN L +++D LM
Sbjct: 1 MKTLQRLVPGCDKVTGKALVLDEIINYVQSLQNQVEFLSMKLALVNPMFYDLAIDLDTLM 60
Query: 432 SKDIYQPNKPLPHSI 446
+ P++ L ++I
Sbjct: 61 VR----PDQKLNYNI 71
>gi|326533782|dbj|BAK05422.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 362
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/61 (70%), Positives = 51/61 (83%), Gaps = 1/61 (1%)
Query: 354 GQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLS 413
GQATD HS+AER+RRE+I+ERMK LQ+LVP NK T KA MLDEII+YV+ LQ QV+ LS
Sbjct: 169 GQATDPHSIAERLRRERIAERMKALQELVPSANK-TDKASMLDEIIDYVKFLQLQVKVLS 227
Query: 414 M 414
M
Sbjct: 228 M 228
>gi|222641577|gb|EEE69709.1| hypothetical protein OsJ_29376 [Oryza sativa Japonica Group]
Length = 410
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 48/71 (67%), Positives = 56/71 (78%), Gaps = 5/71 (7%)
Query: 344 KDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQ 403
+ VRARRGQATD HS+AER+RRE+I+ERMK LQ+LVP NK T KA MLDEII+YV+
Sbjct: 247 RQ--RVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANK-TDKASMLDEIIDYVK 303
Query: 404 SLQRQVEFLSM 414
LQ QV LSM
Sbjct: 304 FLQLQV--LSM 312
>gi|242049278|ref|XP_002462383.1| hypothetical protein SORBIDRAFT_02g024750 [Sorghum bicolor]
gi|241925760|gb|EER98904.1| hypothetical protein SORBIDRAFT_02g024750 [Sorghum bicolor]
Length = 466
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 46/65 (70%), Positives = 53/65 (81%), Gaps = 3/65 (4%)
Query: 350 RARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQV 409
RA RGQATD HS+AER+RRE+I+ERMK LQ+LVP NK T KA MLDEII+YV+ LQ QV
Sbjct: 240 RAWRGQATDPHSIAERLRRERIAERMKALQELVPNANK-TDKASMLDEIIDYVKFLQLQV 298
Query: 410 EFLSM 414
LSM
Sbjct: 299 --LSM 301
>gi|449440508|ref|XP_004138026.1| PREDICTED: uncharacterized protein LOC101208544 [Cucumis sativus]
gi|449501436|ref|XP_004161366.1| PREDICTED: uncharacterized LOC101208544 [Cucumis sativus]
Length = 135
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 41/50 (82%), Positives = 45/50 (90%)
Query: 375 MKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMKLASVNTRLE 424
MK+LQ LVPGC+KVTGKALMLDEIINYVQSLQ QVEFLSMKLAS++ L
Sbjct: 1 MKVLQTLVPGCHKVTGKALMLDEIINYVQSLQNQVEFLSMKLASLDPVLH 50
>gi|302801892|ref|XP_002982702.1| hypothetical protein SELMODRAFT_422025 [Selaginella moellendorffii]
gi|300149801|gb|EFJ16455.1| hypothetical protein SELMODRAFT_422025 [Selaginella moellendorffii]
Length = 443
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 43/61 (70%), Positives = 51/61 (83%), Gaps = 1/61 (1%)
Query: 354 GQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLS 413
GQATD HS+AER+RRE+I+ERMK LQ+LVP NK T KA MLDEII+YV+ LQ QV+ LS
Sbjct: 264 GQATDPHSIAERLRRERIAERMKSLQELVPNSNK-TDKASMLDEIIDYVKFLQLQVKVLS 322
Query: 414 M 414
M
Sbjct: 323 M 323
>gi|302798949|ref|XP_002981234.1| hypothetical protein SELMODRAFT_444782 [Selaginella moellendorffii]
gi|300151288|gb|EFJ17935.1| hypothetical protein SELMODRAFT_444782 [Selaginella moellendorffii]
Length = 443
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 43/61 (70%), Positives = 51/61 (83%), Gaps = 1/61 (1%)
Query: 354 GQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLS 413
GQATD HS+AER+RRE+I+ERMK LQ+LVP NK T KA MLDEII+YV+ LQ QV+ LS
Sbjct: 264 GQATDPHSIAERLRRERIAERMKSLQELVPNSNK-TDKASMLDEIIDYVKFLQLQVKVLS 322
Query: 414 M 414
M
Sbjct: 323 M 323
>gi|168048993|ref|XP_001776949.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162671650|gb|EDQ58198.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 517
Score = 85.1 bits (209), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 50/110 (45%), Positives = 68/110 (61%), Gaps = 4/110 (3%)
Query: 347 IHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQ 406
+ RA+RG AT S+AERVRR KISERMK LQDLVP +K T + MLDE + YV+SLQ
Sbjct: 381 MRTRAKRGCATHPRSIAERVRRTKISERMKKLQDLVPSMDKQTNTSDMLDETVEYVKSLQ 440
Query: 407 RQVEFLS---MKLASVNTRLELNVDALMSKDIYQPNKPLPHSIFQIDSSA 453
RQV+ LS ++L + + + + K + PN P + Q D++A
Sbjct: 441 RQVQELSDTVVRLEAAAAQKIFSDFQIRQKYLATPN-PYSVDVTQADATA 489
>gi|79324891|ref|NP_001031530.1| transcription factor bHLH48 [Arabidopsis thaliana]
gi|330255009|gb|AEC10103.1| transcription factor bHLH48 [Arabidopsis thaliana]
Length = 233
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 36/43 (83%), Positives = 41/43 (95%)
Query: 346 YIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKV 388
Y+HVRARRGQATD+HSLAER RREKI+ RMKLLQ+LVPGC+KV
Sbjct: 182 YVHVRARRGQATDNHSLAERARREKINARMKLLQELVPGCDKV 224
>gi|297820582|ref|XP_002878174.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297324012|gb|EFH54433.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 439
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 37/44 (84%), Positives = 41/44 (93%)
Query: 346 YIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVT 389
Y+HVRARRGQATDSHSLAER RREKI+ RMKLLQ+LVPGC+K T
Sbjct: 201 YVHVRARRGQATDSHSLAERARREKINARMKLLQELVPGCDKGT 244
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 28/47 (59%), Positives = 40/47 (85%)
Query: 388 VTGKALMLDEIINYVQSLQRQVEFLSMKLASVNTRLELNVDALMSKD 434
+ G AL+LDEIIN+VQSLQRQVE LSM+LA+VN R++ N+D +++ +
Sbjct: 303 IQGTALVLDEIINHVQSLQRQVEMLSMRLAAVNPRIDFNLDTILASE 349
>gi|307136009|gb|ADN33865.1| bHLH transcription factor [Cucumis melo subsp. melo]
Length = 135
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 40/49 (81%), Positives = 44/49 (89%)
Query: 375 MKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMKLASVNTRL 423
MK+LQ LVPGC+KVTGKA MLDEIINYVQSLQ QVEFLSMKLAS++ L
Sbjct: 1 MKVLQTLVPGCHKVTGKASMLDEIINYVQSLQNQVEFLSMKLASLHPVL 49
>gi|356504971|ref|XP_003521266.1| PREDICTED: transcription factor UNE12-like [Glycine max]
Length = 292
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/123 (47%), Positives = 79/123 (64%), Gaps = 13/123 (10%)
Query: 301 ESSKNKRCKPNEGKANGNGAVKAEDEGDDKQAK-ANNAKP--------PEPPKDYIHVRA 351
E K + KP+E A+G + D+ D +AK + +P P PP VRA
Sbjct: 76 EQGKGRFMKPDEASASGK---RFRDDVVDNRAKHVFHGQPMPTTMPAAPHPPAIRPRVRA 132
Query: 352 RRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEF 411
RRGQATD HS+AER+RRE+I+ER++ LQ+LVP NK T +A MLDEI++YV+ L+ QV+
Sbjct: 133 RRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRLQVKV 191
Query: 412 LSM 414
LSM
Sbjct: 192 LSM 194
>gi|147770956|emb|CAN76246.1| hypothetical protein VITISV_023382 [Vitis vinifera]
Length = 627
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/173 (32%), Positives = 89/173 (51%), Gaps = 23/173 (13%)
Query: 249 LANSQEESSVSEQVPNDFNSRKRKAVSKGKGKETAASPSVNNTTKVAEANASESSKN--- 305
+A + EE +EQ P R K + G E + P+V + V N+ E + N
Sbjct: 349 VAKTMEEPLPAEQSPVHLPRRTAKGIPDG---EKSIEPAVA-CSSVCSGNSVERASNDPK 404
Query: 306 ----KRCKPNEGKANGNGAVKAEDEGDDKQAKANNAKPPEPPKDYIHVRARRGQATDSHS 361
++C+ E + V+ E G K A A ++R +A + H+
Sbjct: 405 HNLKRKCRDTEESECPSEDVEEESVGVRKSAPAKGG-----------TGSKRSRAAEVHN 453
Query: 362 LAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSM 414
L+ER RR++I+E+M+ LQ+L+P CNKV KA MLDE I Y+++LQ QV+ +SM
Sbjct: 454 LSERRRRDRINEKMRALQELIPNCNKVD-KASMLDEAIEYLKTLQLQVQIMSM 505
>gi|226493556|ref|NP_001141213.1| uncharacterized protein LOC100273300 [Zea mays]
gi|194703300|gb|ACF85734.1| unknown [Zea mays]
gi|223946721|gb|ACN27444.1| unknown [Zea mays]
Length = 154
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 37/61 (60%), Positives = 54/61 (88%), Gaps = 1/61 (1%)
Query: 375 MKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMKLASVNTRLEL-NVDALMSK 433
M+LL++LVPGC+KV+G AL+LDEIIN+VQSLQRQVE+LSM+LA+VN R++ +D+ ++
Sbjct: 1 MELLKELVPGCSKVSGTALVLDEIINHVQSLQRQVEYLSMRLAAVNPRVDFGGLDSFLTT 60
Query: 434 D 434
+
Sbjct: 61 E 61
>gi|115477539|ref|NP_001062365.1| Os08g0536800 [Oryza sativa Japonica Group]
gi|38175541|dbj|BAD01234.1| bHLH transcription factor-like protein [Oryza sativa Japonica
Group]
gi|45736094|dbj|BAD13119.1| bHLH transcription factor-like protein [Oryza sativa Japonica
Group]
gi|113624334|dbj|BAF24279.1| Os08g0536800 [Oryza sativa Japonica Group]
Length = 143
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 50/114 (43%), Positives = 71/114 (62%), Gaps = 21/114 (18%)
Query: 375 MKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMKLASVNTRLE---LNVDALM 431
M++LQ LVPGC+KVTGKAL+LDEIINYVQSLQ QVEFLSM++AS++ L ++ D L
Sbjct: 1 MRMLQALVPGCDKVTGKALILDEIINYVQSLQNQVEFLSMRIASMSPVLYGFGMDSDGLH 60
Query: 432 SKDI---YQPNKPLPHSIFQ----------IDSSASAFFSHQPQQNPALHGNIS 472
+ I +Q +P+ + +D++++ +S Q Q HG IS
Sbjct: 61 DQKIGGMFQEALAMPNPVLNQSSPAPSQAIMDTTSTTSYSLQSQ-----HGAIS 109
>gi|339778391|gb|AEK06077.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778393|gb|AEK06078.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778395|gb|AEK06079.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778399|gb|AEK06081.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778401|gb|AEK06082.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778405|gb|AEK06084.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778407|gb|AEK06085.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778409|gb|AEK06086.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778411|gb|AEK06087.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778413|gb|AEK06088.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778415|gb|AEK06089.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778417|gb|AEK06090.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778419|gb|AEK06091.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778421|gb|AEK06092.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778423|gb|AEK06093.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778425|gb|AEK06094.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778427|gb|AEK06095.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778429|gb|AEK06096.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
Length = 589
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 84/271 (30%), Positives = 129/271 (47%), Gaps = 38/271 (14%)
Query: 155 PLNSSVAEFSADPGFAERAA----RFSRFGSRSFNGRSTGQFVPNHNPDQFGLSR---SN 207
P+NSS+ FS FA AA G R+ +G S+ + + N + GL + S+
Sbjct: 136 PINSSLMNFSH---FARPAALVKANLQNVGMRASSGTSSMERMQNKDKGSIGLPKETDSH 192
Query: 208 NNPNPMTANEKLPRVSSSPSLKVLGSQAQATGNKSPQDRSELANSQEESSVSEQVPNDFN 267
PN M++ +V P+ P + S A EE S +D N
Sbjct: 193 CRPNMMSS-----KVEVKPT------------EVKPAEGSVPAELPEEMSQEGDSKSDRN 235
Query: 268 SRKRKAVSKGKGKETAASPSVNNTTKVAEANASESSKNKRCKPNEGKANGNGAVKAED-- 325
+ S KG E V TT+ A++S S N +P++ N K D
Sbjct: 236 CHQNFGESAIKGLE-----DVEKTTEPLVASSSVGSGNSAERPSDDPTE-NLKRKHRDTE 289
Query: 326 --EGDDKQAKANNAKPPEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVP 383
EG + A+ + +P ++RG+A + H+L+ER RR++I+E+M+ LQ+L+P
Sbjct: 290 ESEGPSEDAEEESVGAKKPASARAGNGSKRGRAAEVHNLSERRRRDRINEKMRALQELIP 349
Query: 384 GCNKVTGKALMLDEIINYVQSLQRQVEFLSM 414
CNKV KA MLDE I Y+++LQ QV+ +SM
Sbjct: 350 NCNKVD-KASMLDEAIEYLKTLQLQVQIMSM 379
>gi|339778403|gb|AEK06083.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
Length = 589
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 84/271 (30%), Positives = 129/271 (47%), Gaps = 38/271 (14%)
Query: 155 PLNSSVAEFSADPGFAERAA----RFSRFGSRSFNGRSTGQFVPNHNPDQFGLSR---SN 207
P+NSS+ FS FA AA G R+ +G S+ + + N + GL + S+
Sbjct: 136 PINSSLMNFSH---FARPAALVKANLQNVGMRASSGTSSMERMQNKDKGSIGLPKETDSH 192
Query: 208 NNPNPMTANEKLPRVSSSPSLKVLGSQAQATGNKSPQDRSELANSQEESSVSEQVPNDFN 267
PN M++ +V P+ P + S A EE S +D N
Sbjct: 193 CRPNMMSS-----KVEVKPT------------EVKPAEGSVPAELPEEMSQEGDSKSDRN 235
Query: 268 SRKRKAVSKGKGKETAASPSVNNTTKVAEANASESSKNKRCKPNEGKANGNGAVKAED-- 325
+ S KG E V TT+ A++S S N +P++ N K D
Sbjct: 236 CHQNFGESAIKGLE-----DVEKTTEPLVASSSVGSGNSAERPSDDPTE-NLKRKHRDTE 289
Query: 326 --EGDDKQAKANNAKPPEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVP 383
EG + A+ + +P ++RG+A + H+L+ER RR++I+E+M+ LQ+L+P
Sbjct: 290 ESEGPSEDAEEESVGAKKPASARAGNGSKRGRAAEVHNLSERRRRDRINEKMRALQELIP 349
Query: 384 GCNKVTGKALMLDEIINYVQSLQRQVEFLSM 414
CNKV KA MLDE I Y+++LQ QV+ +SM
Sbjct: 350 NCNKVD-KASMLDEAIEYLKTLQLQVQIMSM 379
>gi|339778389|gb|AEK06076.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
Length = 589
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 84/271 (30%), Positives = 129/271 (47%), Gaps = 38/271 (14%)
Query: 155 PLNSSVAEFSADPGFAERAA----RFSRFGSRSFNGRSTGQFVPNHNPDQFGLSR---SN 207
P+NSS+ FS FA AA G R+ +G S+ + + N + GL + S+
Sbjct: 136 PINSSLMNFSH---FARPAALVKANLQNVGMRASSGTSSMERMQNKDKGSIGLPKETDSH 192
Query: 208 NNPNPMTANEKLPRVSSSPSLKVLGSQAQATGNKSPQDRSELANSQEESSVSEQVPNDFN 267
PN M++ +V P+ P + S A EE S +D N
Sbjct: 193 CRPNMMSS-----KVEVKPT------------EVKPAEGSVPAELPEEMSQEGDSKSDRN 235
Query: 268 SRKRKAVSKGKGKETAASPSVNNTTKVAEANASESSKNKRCKPNEGKANGNGAVKAED-- 325
+ S KG E V TT+ A++S S N +P++ N K D
Sbjct: 236 CHQNFGESAIKGLE-----DVEKTTEPLVASSSVGSGNSAERPSDDPTE-NLKRKHRDTE 289
Query: 326 --EGDDKQAKANNAKPPEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVP 383
EG + A+ + +P ++RG+A + H+L+ER RR++I+E+M+ LQ+L+P
Sbjct: 290 ESEGPSEDAEEESVGAKKPASARAGNGSKRGRAAEVHNLSERRRRDRINEKMRALQELIP 349
Query: 384 GCNKVTGKALMLDEIINYVQSLQRQVEFLSM 414
CNKV KA MLDE I Y+++LQ QV+ +SM
Sbjct: 350 NCNKVD-KASMLDEAIEYLKTLQLQVQIMSM 379
>gi|339778397|gb|AEK06080.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
Length = 589
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 84/271 (30%), Positives = 129/271 (47%), Gaps = 38/271 (14%)
Query: 155 PLNSSVAEFSADPGFAERAA----RFSRFGSRSFNGRSTGQFVPNHNPDQFGLSR---SN 207
P+NSS+ FS FA AA G R+ +G S+ + + N + GL + S+
Sbjct: 136 PINSSLMNFSH---FARPAALVKANLQNVGMRASSGTSSMERMQNKDKGSIGLPKETDSH 192
Query: 208 NNPNPMTANEKLPRVSSSPSLKVLGSQAQATGNKSPQDRSELANSQEESSVSEQVPNDFN 267
PN M++ +V P+ P + S A EE S +D N
Sbjct: 193 CRPNMMSS-----KVEVKPT------------EVKPAEGSVPAELPEEMSQEGDSKSDRN 235
Query: 268 SRKRKAVSKGKGKETAASPSVNNTTKVAEANASESSKNKRCKPNEGKANGNGAVKAED-- 325
+ S KG E V TT+ A++S S N +P++ N K D
Sbjct: 236 CHQNFGESAIKGLE-----DVEKTTEPLVASSSVGSGNSAERPSDDPTE-NLKRKHRDTE 289
Query: 326 --EGDDKQAKANNAKPPEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVP 383
EG + A+ + +P ++RG+A + H+L+ER RR++I+E+M+ LQ+L+P
Sbjct: 290 ESEGPSEDAEEESVGAKKPASARAGNGSKRGRAAEVHNLSERRRRDRINEKMRALQELIP 349
Query: 384 GCNKVTGKALMLDEIINYVQSLQRQVEFLSM 414
CNKV KA MLDE I Y+++LQ QV+ +SM
Sbjct: 350 NCNKVD-KASMLDEAIEYLKTLQLQVQIMSM 379
>gi|339778387|gb|AEK06075.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
Length = 589
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 84/271 (30%), Positives = 129/271 (47%), Gaps = 38/271 (14%)
Query: 155 PLNSSVAEFSADPGFAERAA----RFSRFGSRSFNGRSTGQFVPNHNPDQFGLSR---SN 207
P+NSS+ FS FA AA G R+ +G S+ + + N + GL + S+
Sbjct: 136 PINSSLMNFSH---FARPAALVKANLQNVGMRASSGTSSMERMQNKDKGSIGLPKETDSH 192
Query: 208 NNPNPMTANEKLPRVSSSPSLKVLGSQAQATGNKSPQDRSELANSQEESSVSEQVPNDFN 267
PN M++ +V P+ P + S A EE S +D N
Sbjct: 193 CRPNMMSS-----KVEVKPT------------EVKPAEGSVPAELPEEMSQEGDSKSDRN 235
Query: 268 SRKRKAVSKGKGKETAASPSVNNTTKVAEANASESSKNKRCKPNEGKANGNGAVKAED-- 325
+ S KG E V TT+ A++S S N +P++ N K D
Sbjct: 236 CHQNFGESAIKGLE-----DVEKTTEPLVASSSVGSGNSAERPSDDPTE-NLKRKHRDTE 289
Query: 326 --EGDDKQAKANNAKPPEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVP 383
EG + A+ + +P ++RG+A + H+L+ER RR++I+E+M+ LQ+L+P
Sbjct: 290 ESEGPSEDAEEESVGAKKPASARAGNGSKRGRAAEVHNLSERRRRDRINEKMRALQELIP 349
Query: 384 GCNKVTGKALMLDEIINYVQSLQRQVEFLSM 414
CNKV KA MLDE I Y+++LQ QV+ +SM
Sbjct: 350 NCNKVD-KASMLDEAIEYLKTLQLQVQIMSM 379
>gi|195643094|gb|ACG41015.1| bHLH transcription factor GBOF-1 [Zea mays]
Length = 151
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 37/49 (75%), Positives = 45/49 (91%)
Query: 375 MKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMKLASVNTRL 423
M++LQ LVPGC+KVTGKAL+LDEIINYVQSLQ QVEFLSM++AS++ L
Sbjct: 1 MRMLQALVPGCDKVTGKALILDEIINYVQSLQNQVEFLSMRIASMSPVL 49
>gi|51090923|dbj|BAD35528.1| basic helix-loop-helix protein-like [Oryza sativa Japonica Group]
gi|51090957|dbj|BAD35560.1| basic helix-loop-helix protein-like [Oryza sativa Japonica Group]
gi|215678579|dbj|BAG92234.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 154
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 36/51 (70%), Positives = 48/51 (94%)
Query: 375 MKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMKLASVNTRLEL 425
M+LL++LVPGC+KV+G AL+LDEIIN+VQSLQRQVE+LSM+LA+VN R++
Sbjct: 1 MELLKELVPGCSKVSGTALVLDEIINHVQSLQRQVEYLSMRLAAVNPRVDF 51
>gi|225437207|ref|XP_002281626.1| PREDICTED: transcription factor UNE12 [Vitis vinifera]
gi|297735488|emb|CBI17928.3| unnamed protein product [Vitis vinifera]
Length = 289
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/117 (50%), Positives = 77/117 (65%), Gaps = 6/117 (5%)
Query: 298 NASESSKNKRCKPNEGKANGNGAVKAEDEGDDKQAKANNAKPPEPPKDYIHVRARRGQAT 357
+AS S K R + +G+A+ VK G QA A P PP VRARRGQAT
Sbjct: 81 DASGSGKRFREEVIDGRAS---TVKNAFHGQPMQATVAAA--PHPPAIRPRVRARRGQAT 135
Query: 358 DSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSM 414
D HS+AER+RRE+I+ER++ LQ+LVP NK T +A MLDEI++YV+ L+ QV+ LSM
Sbjct: 136 DPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRLQVKVLSM 191
>gi|168027605|ref|XP_001766320.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162682534|gb|EDQ68952.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 120
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/73 (57%), Positives = 53/73 (72%)
Query: 347 IHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQ 406
+ RA+RG AT S+AERVRR KISERMK LQDLVP +K T + MLDE + YV+SLQ
Sbjct: 30 MRTRAKRGCATHPRSIAERVRRTKISERMKRLQDLVPNMDKQTNTSDMLDETVEYVKSLQ 89
Query: 407 RQVEFLSMKLASV 419
R+V+ LS +A +
Sbjct: 90 RKVQELSDTVARL 102
>gi|357440517|ref|XP_003590536.1| Transcription factor UNE12 [Medicago truncatula]
gi|355479584|gb|AES60787.1| Transcription factor UNE12 [Medicago truncatula]
Length = 282
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/115 (48%), Positives = 76/115 (66%), Gaps = 11/115 (9%)
Query: 308 CKPNEGKANGNGAVKAEDEGDDKQAKANNAKP--------PEPPKDYIHVRARRGQATDS 359
KP+E A+G+G ED D + + +P P+PP VRARRGQATD
Sbjct: 73 LKPDE--ASGSGKRFREDLVDTRPKNTFHGQPMPTTVPAAPQPPAMRPRVRARRGQATDP 130
Query: 360 HSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSM 414
HS+AER+RRE+I+ER++ LQ+LVP NK T +A MLDEI++YV+ L+ QV+ LSM
Sbjct: 131 HSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRLQVKVLSM 184
>gi|255544792|ref|XP_002513457.1| DNA binding protein, putative [Ricinus communis]
gi|223547365|gb|EEF48860.1| DNA binding protein, putative [Ricinus communis]
Length = 418
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/65 (58%), Positives = 49/65 (75%)
Query: 349 VRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQ 408
+RA+RG AT S+AERVRR +ISERM+ LQDLVP +K T + MLD ++Y++ LQRQ
Sbjct: 339 IRAKRGCATHPRSIAERVRRTRISERMRKLQDLVPNMDKQTNTSDMLDLAVDYIKDLQRQ 398
Query: 409 VEFLS 413
VE LS
Sbjct: 399 VETLS 403
>gi|356557515|ref|XP_003547061.1| PREDICTED: transcription factor bHLH122-like [Glycine max]
Length = 411
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/65 (58%), Positives = 49/65 (75%)
Query: 349 VRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQ 408
+RA+RG AT S+AERVRR KISERM+ LQDLVP +K T A MLD ++Y++ LQ+Q
Sbjct: 333 IRAKRGCATHPRSIAERVRRTKISERMRKLQDLVPNMDKQTNTADMLDLAVDYIKDLQKQ 392
Query: 409 VEFLS 413
V+ LS
Sbjct: 393 VQTLS 397
>gi|242094954|ref|XP_002437967.1| hypothetical protein SORBIDRAFT_10g005650 [Sorghum bicolor]
gi|241916190|gb|EER89334.1| hypothetical protein SORBIDRAFT_10g005650 [Sorghum bicolor]
Length = 447
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/59 (69%), Positives = 49/59 (83%), Gaps = 1/59 (1%)
Query: 356 ATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSM 414
ATD HS+AER+RRE+I+ERMK LQ+LVP NK T KA MLDEII+YV+ LQ QV+ LSM
Sbjct: 220 ATDPHSIAERLRRERIAERMKSLQELVPNANK-TDKASMLDEIIDYVKFLQLQVKVLSM 277
>gi|255559915|ref|XP_002520976.1| DNA binding protein, putative [Ricinus communis]
gi|223539813|gb|EEF41393.1| DNA binding protein, putative [Ricinus communis]
Length = 299
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/125 (46%), Positives = 75/125 (60%), Gaps = 14/125 (11%)
Query: 301 ESSKNKRCKPNEGKANGNGAVKAEDEGDDKQAKANN-----------AKPPEPPKDYIHV 349
E K KP E A+G+G +D D + N A P PP V
Sbjct: 80 EQGKGGFLKPEE--ASGSGKRFRDDVVDGRANTVKNVFHGQPMPTTMAAAPHPPTMRPRV 137
Query: 350 RARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQV 409
RARRGQATD HS+AER+RRE+I+ER++ LQ+LVP NK T +A MLDEI++YV+ L+ QV
Sbjct: 138 RARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRLQV 196
Query: 410 EFLSM 414
+ LSM
Sbjct: 197 KVLSM 201
>gi|414871802|tpg|DAA50359.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 562
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/188 (32%), Positives = 93/188 (49%), Gaps = 37/188 (19%)
Query: 250 ANSQEESSVSEQVPNDFNSRKRKAVSKGKGKETAASPSVNNTTKVAE------------A 297
++ + S S +P+ S AV G+G E ++S N A +
Sbjct: 228 GTARGDGSGSAALPSAVGSANANAVGGGRGHEASSSGRSNYCCFGAATTTTTTTTTEPAS 287
Query: 298 NASESSKNKRC------KPNEGKANGNGAVKAEDEGDDKQAKANNAKPPEPPKDYIHVRA 351
++ SSK KR P+E +G+ A+ A KPP+ A
Sbjct: 288 TSNRSSKRKRLDTEDSESPSEDAESGSAAMLAR-------------KPPQ-----KMTTA 329
Query: 352 RRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEF 411
RR +A + H+L+ER RR++I+E+M+ LQ+L+P CNK T KA MLDE I Y++SLQ QV+
Sbjct: 330 RRSRAAEVHNLSERRRRDRINEKMRALQELIPHCNK-TDKASMLDEAIEYLKSLQLQVQM 388
Query: 412 LSMKLASV 419
+ M A +
Sbjct: 389 MWMGSAGI 396
>gi|356550347|ref|XP_003543549.1| PREDICTED: transcription factor bHLH122-like [Glycine max]
Length = 408
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 38/65 (58%), Positives = 49/65 (75%)
Query: 349 VRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQ 408
+RA+RG AT S+AERVRR KISERM+ LQDLVP +K T A MLD ++Y++ LQ+Q
Sbjct: 330 IRAKRGCATHPRSIAERVRRTKISERMRKLQDLVPNMDKQTNTADMLDLAVDYIKDLQKQ 389
Query: 409 VEFLS 413
V+ LS
Sbjct: 390 VQTLS 394
>gi|226493691|ref|NP_001147809.1| PIL5 [Zea mays]
gi|195613866|gb|ACG28763.1| PIL5 [Zea mays]
Length = 539
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/188 (32%), Positives = 93/188 (49%), Gaps = 37/188 (19%)
Query: 250 ANSQEESSVSEQVPNDFNSRKRKAVSKGKGKETAASPSVNNTTKVAE------------A 297
++ + S S +P+ S AV G+G E ++S N A +
Sbjct: 228 GTARGDGSGSAALPSAVGSANANAVGGGRGHEASSSGRSNYCCFGAATTTTTTTTTEPAS 287
Query: 298 NASESSKNKRC------KPNEGKANGNGAVKAEDEGDDKQAKANNAKPPEPPKDYIHVRA 351
++ SSK KR P+E +G+ A+ A KPP+ A
Sbjct: 288 TSNRSSKRKRLDTEDSESPSEDAESGSAAMLAR-------------KPPQ-----KMTTA 329
Query: 352 RRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEF 411
RR +A + H+L+ER RR++I+E+M+ LQ+L+P CNK T KA MLDE I Y++SLQ QV+
Sbjct: 330 RRSRAAEVHNLSERRRRDRINEKMRALQELIPHCNK-TDKASMLDEAIEYLKSLQLQVQM 388
Query: 412 LSMKLASV 419
+ M A +
Sbjct: 389 MWMGSAGI 396
>gi|356572238|ref|XP_003554277.1| PREDICTED: transcription factor UNE12-like [Glycine max]
Length = 292
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/123 (46%), Positives = 77/123 (62%), Gaps = 13/123 (10%)
Query: 301 ESSKNKRCKPNEGKANGNGAVKAEDEGDDKQAK-ANNAKP--------PEPPKDYIHVRA 351
+ K KP E A+G + D+ D +AK + +P P PP VRA
Sbjct: 76 DQGKGGFMKPEEASASGK---RFRDDVVDNRAKNVFHGQPMPTTMPAAPHPPAIRPRVRA 132
Query: 352 RRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEF 411
RRGQATD HS+AER+RRE+I+ER++ LQ+LVP NK T +A MLDEI++YV+ L+ QV+
Sbjct: 133 RRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRLQVKV 191
Query: 412 LSM 414
LSM
Sbjct: 192 LSM 194
>gi|356544541|ref|XP_003540708.1| PREDICTED: transcription factor bHLH122-like [Glycine max]
Length = 415
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 39/65 (60%), Positives = 47/65 (72%)
Query: 349 VRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQ 408
+RA+RG AT S+AERVRR KISERM+ LQDLVP +K T A MLD + Y++ LQ Q
Sbjct: 337 IRAKRGCATHPRSIAERVRRTKISERMRKLQDLVPNMDKQTNTADMLDLAVEYIKDLQNQ 396
Query: 409 VEFLS 413
VE LS
Sbjct: 397 VEALS 401
>gi|224124534|ref|XP_002330047.1| predicted protein [Populus trichocarpa]
gi|222871472|gb|EEF08603.1| predicted protein [Populus trichocarpa]
Length = 733
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 91/323 (28%), Positives = 144/323 (44%), Gaps = 35/323 (10%)
Query: 114 PYINNNSNNNNGSSSTNASCYTTPLNSP---------PKLNLPMSLGNSMPLNSSVAEFS 164
PY + + NG S++NA+ + ++S P + + + NSS+ FS
Sbjct: 206 PYFRSRVSAKNGDSTSNAAHHVVSVDSIRAPTSGGGFPSIKMQKQVPAQSTTNSSLMNFS 265
Query: 165 --ADPGFAERAARFSRFGSRSFNGRSTGQFVPNHNPDQFGLSRSNNNPNPMTANEKLPRV 222
A P A A G R+ G S + N + S + P+ + L +
Sbjct: 266 HFARPA-ALAKANLQNIGMRAGTGISNMERTQNKDKGSIASSSNPAECTPINSCSGLLKE 324
Query: 223 SSSPSLKVLG--------SQAQATGNKSPQDRSELANSQEESSVSEQVPNDFNSRKRKAV 274
+SS L VL S+A+ P + E + +S +F K V
Sbjct: 325 TSSHCLPVLMPPKVDAKPSEAKPAEGFVPAELPEATIPEGDSKSDRNCRQNFCESAIKGV 384
Query: 275 SK-GKGKE-TAASPSVNNTTKVAEANASESSKNKRCKPNEGKANG-NGAVKAEDEGDDKQ 331
+ K KE AS SV + V A+ + KR + ++ G + V+ E G KQ
Sbjct: 385 ADVEKTKEPVVASSSVGSDNSVERASDDPTENLKRKHRDTEESEGPSEDVEEESVGAKKQ 444
Query: 332 AKANNAKPPEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGK 391
A A ++R +A + H+L+ER RR++I+E+M+ LQ+L+P CNKV K
Sbjct: 445 APARAGN-----------GSKRNRAAEVHNLSERRRRDRINEKMRALQELIPNCNKVD-K 492
Query: 392 ALMLDEIINYVQSLQRQVEFLSM 414
A MLDE I Y+++LQ QV+ +SM
Sbjct: 493 ASMLDEAIEYLKTLQLQVQIMSM 515
>gi|356534971|ref|XP_003536024.1| PREDICTED: transcription factor PIF3-like [Glycine max]
Length = 665
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 59/180 (32%), Positives = 93/180 (51%), Gaps = 19/180 (10%)
Query: 240 NKSPQDRSELANSQEESSVS---EQVPNDFNSRKRKAVSKGKGKETAASPSV--NNTTKV 294
N P +SE A + + + QVP D ++ + A K K + AS SV N T
Sbjct: 328 NAVPSKQSEPAGKESAAKIDLIPNQVPGDNGTKGQTAAEKSK-EPAVASSSVCSGNGTDQ 386
Query: 295 AEANASESSKNKRCKPNEGKANGNGAVKAEDEGDDKQAKANNAKPPEPPKDYIHVRARRG 354
+++ K KR ++ + + V+ E G K A ++R
Sbjct: 387 GSEEPNQNLKRKRKDTDDSECHSED-VEEESAGAKKTAGGRGG-----------AGSKRS 434
Query: 355 QATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSM 414
+A + H+L+ER RR++I+E+M+ LQ+L+P CNKV KA MLDE I Y+++LQ QV+ +SM
Sbjct: 435 RAAEVHNLSERKRRDRINEKMRALQELIPNCNKVD-KASMLDEAIEYLKTLQLQVQIMSM 493
>gi|356538931|ref|XP_003537954.1| PREDICTED: transcription factor bHLH122-like [Glycine max]
Length = 418
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 38/65 (58%), Positives = 47/65 (72%)
Query: 349 VRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQ 408
+RA+RG AT S+AERVRR KISERM+ LQDLVP +K T A MLD + Y++ LQ Q
Sbjct: 340 IRAKRGCATHPRSIAERVRRTKISERMRKLQDLVPNMDKQTNTADMLDLAVEYIKDLQNQ 399
Query: 409 VEFLS 413
V+ LS
Sbjct: 400 VQTLS 404
>gi|449458442|ref|XP_004146956.1| PREDICTED: transcription factor UNE12-like [Cucumis sativus]
gi|449503810|ref|XP_004162188.1| PREDICTED: transcription factor UNE12-like [Cucumis sativus]
Length = 316
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 52/104 (50%), Positives = 68/104 (65%), Gaps = 2/104 (1%)
Query: 330 KQAKANNAKPPEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVT 389
+Q A P PP VRARRGQATD HS+AER+RRE+I+ER++ LQ+LVP NK T
Sbjct: 135 QQMHAAMGAAPHPPAMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-T 193
Query: 390 GKALMLDEIINYVQSLQRQVEFLSM-KLASVNTRLELNVDALMS 432
+A MLDEI++YV+ L+ QV+ LSM +L L D +S
Sbjct: 194 DRAAMLDEIVDYVKFLRLQVKVLSMSRLGGAGAVAPLVTDIPLS 237
>gi|168056355|ref|XP_001780186.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668419|gb|EDQ55027.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 144
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 40/71 (56%), Positives = 51/71 (71%)
Query: 349 VRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQ 408
+RA RG AT S+AERVRR KISERMK LQDLVP ++ T A MLD+ + YV+ LQ+Q
Sbjct: 63 IRANRGHATHPRSIAERVRRGKISERMKKLQDLVPSMDRQTNTADMLDDAVEYVKQLQQQ 122
Query: 409 VEFLSMKLASV 419
V+ LS +A +
Sbjct: 123 VQELSKTVAEL 133
>gi|223702400|gb|ACN21631.1| putative basic helix-loop-helix protein BHLH4 [Lotus japonicus]
Length = 275
Score = 78.6 bits (192), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 46/75 (61%), Positives = 60/75 (80%), Gaps = 1/75 (1%)
Query: 340 PEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEII 399
P PP VRARRGQATD HS+AER+RRE+I+ER++ LQ+LVP NK T +A+MLDEI+
Sbjct: 114 PHPPPMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAVMLDEIV 172
Query: 400 NYVQSLQRQVEFLSM 414
+YV+ L+ QV+ LSM
Sbjct: 173 DYVKFLRLQVKVLSM 187
>gi|242096368|ref|XP_002438674.1| hypothetical protein SORBIDRAFT_10g024110 [Sorghum bicolor]
gi|241916897|gb|EER90041.1| hypothetical protein SORBIDRAFT_10g024110 [Sorghum bicolor]
Length = 154
Score = 78.6 bits (192), Expect = 9e-12, Method: Composition-based stats.
Identities = 37/61 (60%), Positives = 54/61 (88%), Gaps = 1/61 (1%)
Query: 375 MKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMKLASVNTRLEL-NVDALMSK 433
M+LL++LVPGC+KV+G AL+LDEIIN+VQSLQRQVE+LSM+LA+VN R++ +D+ ++
Sbjct: 1 MELLKELVPGCSKVSGTALVLDEIINHVQSLQRQVEYLSMRLAAVNPRVDFGGLDSFLTT 60
Query: 434 D 434
+
Sbjct: 61 E 61
>gi|357444375|ref|XP_003592465.1| Transcription factor bHLH130 [Medicago truncatula]
gi|355481513|gb|AES62716.1| Transcription factor bHLH130 [Medicago truncatula]
Length = 433
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 38/65 (58%), Positives = 47/65 (72%)
Query: 349 VRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQ 408
+RA+RG AT S+AERVRR KISERM+ LQDLVP +K T + MLD + Y++ LQ Q
Sbjct: 355 IRAKRGCATHPRSIAERVRRTKISERMRKLQDLVPNMDKQTNTSDMLDLAVEYIKDLQNQ 414
Query: 409 VEFLS 413
VE LS
Sbjct: 415 VETLS 419
>gi|357440519|ref|XP_003590537.1| Transcription factor UNE12 [Medicago truncatula]
gi|355479585|gb|AES60788.1| Transcription factor UNE12 [Medicago truncatula]
Length = 285
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/75 (61%), Positives = 60/75 (80%), Gaps = 1/75 (1%)
Query: 340 PEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEII 399
P+PP VRARRGQATD HS+AER+RRE+I+ER++ LQ+LVP NK T +A MLDEI+
Sbjct: 114 PQPPAMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIV 172
Query: 400 NYVQSLQRQVEFLSM 414
+YV+ L+ QV+ LSM
Sbjct: 173 DYVKFLRLQVKVLSM 187
>gi|223702398|gb|ACN21630.1| putative basic helix-loop-helix protein BHLH3 [Lotus japonicus]
Length = 297
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/134 (43%), Positives = 80/134 (59%), Gaps = 12/134 (8%)
Query: 308 CKPNEGKANGNGAVKAEDEGDDKQAKANNAKP--------PEPPKDYIHVRARRGQATDS 359
KP + A+G+G +D D + + +P P PP VRARRGQATD
Sbjct: 88 LKPED--ASGSGKRFRDDVVDGRPKNVYHGQPMSTTMPAAPHPPAMRPRVRARRGQATDP 145
Query: 360 HSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSM-KLAS 418
HS+AER+RRE+I+ER++ LQ+LVP NK T +A MLDEI++YV+ L+ QV+ LSM +L
Sbjct: 146 HSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRLQVKVLSMSRLGG 204
Query: 419 VNTRLELNVDALMS 432
L D +S
Sbjct: 205 AGAVAPLVTDIPLS 218
>gi|224075772|ref|XP_002304761.1| predicted protein [Populus trichocarpa]
gi|222842193|gb|EEE79740.1| predicted protein [Populus trichocarpa]
Length = 422
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/65 (55%), Positives = 48/65 (73%)
Query: 349 VRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQ 408
+RA+RG AT S+AERVRR +ISERM+ LQDLVP +K T + MLD ++Y++ LQRQ
Sbjct: 344 IRAKRGCATHPRSIAERVRRTRISERMRKLQDLVPNMDKQTNTSDMLDLAVDYIKDLQRQ 403
Query: 409 VEFLS 413
+ LS
Sbjct: 404 FKALS 408
>gi|224066311|ref|XP_002302077.1| predicted protein [Populus trichocarpa]
gi|222843803|gb|EEE81350.1| predicted protein [Populus trichocarpa]
Length = 300
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/122 (45%), Positives = 75/122 (61%), Gaps = 11/122 (9%)
Query: 301 ESSKNKRCKPNEGKANGNGAVKAEDEGDDKQAKANNAKP--------PEPPKDYIHVRAR 352
E K KP E A+G+G +D D + + +P PP VRAR
Sbjct: 84 EQGKGGFLKPEE--ASGSGNRFRDDIVDGRVRNVFHGQPMPTTVTAATHPPAMRPRVRAR 141
Query: 353 RGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFL 412
RGQATD HS+AER+RRE+I+ER++ LQ+LVP NK T +A MLDEI++YV+ L+ QV+ L
Sbjct: 142 RGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRLQVKIL 200
Query: 413 SM 414
SM
Sbjct: 201 SM 202
>gi|356545930|ref|XP_003541386.1| PREDICTED: transcription factor PIF1-like [Glycine max]
Length = 476
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/152 (35%), Positives = 88/152 (57%), Gaps = 14/152 (9%)
Query: 271 RKAVSKGKGKETAASPSVNNTTKVAEANASESSKNKRCKP-NEGKANGNGAVKAEDEGDD 329
+ AVS G G+ETA + + T + ++S S++ +P + K G ++E + +D
Sbjct: 186 KTAVSDG-GRETA---TCDVTVTSSPGDSSGSAEPVEREPMADRKRKGREHEESEFQSED 241
Query: 330 KQAKANNAKPPEPPKDYIH--VRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNK 387
++ AK +H +R +A + H+L+ER RR++I+E+MK LQ+L+P CNK
Sbjct: 242 VDFESPEAK------KQVHGSTSTKRSRAAEVHNLSERRRRDRINEKMKALQELIPRCNK 295
Query: 388 VTGKALMLDEIINYVQSLQRQVEFLSMKLASV 419
+ KA MLDE I Y++SLQ QV+ +SM V
Sbjct: 296 -SDKASMLDEAIEYLKSLQLQVQMMSMGYGMV 326
>gi|359480088|ref|XP_002263397.2| PREDICTED: transcription factor PIF1-like [Vitis vinifera]
Length = 517
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/69 (52%), Positives = 53/69 (76%), Gaps = 1/69 (1%)
Query: 351 ARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVE 410
A+R +A + H+L+ER RR++I+E+MK LQ+L+P CNK + KA MLDE I Y++SLQ QV+
Sbjct: 304 AKRSRAAEVHNLSERRRRDRINEKMKALQELIPRCNK-SDKASMLDEAIEYLKSLQLQVQ 362
Query: 411 FLSMKLASV 419
+SM + V
Sbjct: 363 MMSMGCSMV 371
>gi|297744279|emb|CBI37249.3| unnamed protein product [Vitis vinifera]
Length = 479
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/69 (52%), Positives = 53/69 (76%), Gaps = 1/69 (1%)
Query: 351 ARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVE 410
A+R +A + H+L+ER RR++I+E+MK LQ+L+P CNK + KA MLDE I Y++SLQ QV+
Sbjct: 266 AKRSRAAEVHNLSERRRRDRINEKMKALQELIPRCNK-SDKASMLDEAIEYLKSLQLQVQ 324
Query: 411 FLSMKLASV 419
+SM + V
Sbjct: 325 MMSMGCSMV 333
>gi|357454359|ref|XP_003597460.1| Transcription factor bHLH122 [Medicago truncatula]
gi|355486508|gb|AES67711.1| Transcription factor bHLH122 [Medicago truncatula]
Length = 412
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/66 (54%), Positives = 48/66 (72%)
Query: 347 IHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQ 406
+ +RA+RG AT S+AERVRR KISERM+ LQDLVP +K T A MLD ++Y++ LQ
Sbjct: 330 MKIRAKRGCATHPRSIAERVRRTKISERMRKLQDLVPNMDKQTNTADMLDLAVDYIKDLQ 389
Query: 407 RQVEFL 412
+Q + L
Sbjct: 390 KQAQKL 395
>gi|359487706|ref|XP_002276198.2| PREDICTED: transcription factor PIF3-like [Vitis vinifera]
Length = 752
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/156 (32%), Positives = 80/156 (51%), Gaps = 23/156 (14%)
Query: 266 FNSRKRKAVSKGKGKETAASPSVNNTTKVAEANASESSKN-------KRCKPNEGKANGN 318
+R K + G E P+V + V N+ E + N ++C+ E +
Sbjct: 381 LGARTAKGIPDG---EKTIEPAVA-CSSVCSGNSVERASNDPKHNLKRKCRDTEESECPS 436
Query: 319 GAVKAEDEGDDKQAKANNAKPPEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKLL 378
V+ E G K A A ++R +A + H+L+ER RR++I+E+M+ L
Sbjct: 437 EDVEEESVGVRKSAPAKGG-----------TGSKRSRAAEVHNLSERRRRDRINEKMRAL 485
Query: 379 QDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSM 414
Q+L+P CNKV KA MLDE I Y+++LQ QV+ +SM
Sbjct: 486 QELIPNCNKVD-KASMLDEAIEYLKTLQLQVQIMSM 520
>gi|449437603|ref|XP_004136581.1| PREDICTED: transcription factor bHLH130-like [Cucumis sativus]
gi|449522885|ref|XP_004168456.1| PREDICTED: transcription factor bHLH130-like [Cucumis sativus]
Length = 366
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 36/65 (55%), Positives = 48/65 (73%)
Query: 349 VRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQ 408
+RA+RG AT S+AERVRR +ISERM+ LQDLVP +K T A MLD ++Y++ LQ+Q
Sbjct: 282 IRAKRGCATHPRSIAERVRRTRISERMRKLQDLVPNMDKQTNTADMLDLAVDYIKELQKQ 341
Query: 409 VEFLS 413
+ LS
Sbjct: 342 FKTLS 346
>gi|168040637|ref|XP_001772800.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162675877|gb|EDQ62367.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 461
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 45/95 (47%), Positives = 59/95 (62%), Gaps = 9/95 (9%)
Query: 326 EGDDKQAKANNAKPPEPPKDYIH-VRARRGQATDSHSLAERVRREKISERMKLLQDLVPG 384
E DD QA +P Y+ +RA RG AT S+AERVRR KISERMK LQ+LVP
Sbjct: 363 ELDDLQA--------DPSMVYLKTLRANRGHATHPRSIAERVRRGKISERMKKLQELVPN 414
Query: 385 CNKVTGKALMLDEIINYVQSLQRQVEFLSMKLASV 419
++ T A MLD+ + YV+ LQ QV+ L+ +A +
Sbjct: 415 SDRQTNTADMLDDAVEYVKQLQLQVQELTNTVAEL 449
>gi|296089857|emb|CBI39676.3| unnamed protein product [Vitis vinifera]
Length = 573
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/156 (32%), Positives = 80/156 (51%), Gaps = 23/156 (14%)
Query: 266 FNSRKRKAVSKGKGKETAASPSVNNTTKVAEANASESSKN-------KRCKPNEGKANGN 318
+R K + G E P+V + V N+ E + N ++C+ E +
Sbjct: 245 LGARTAKGIPDG---EKTIEPAVA-CSSVCSGNSVERASNDPKHNLKRKCRDTEESECPS 300
Query: 319 GAVKAEDEGDDKQAKANNAKPPEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKLL 378
V+ E G K A A ++R +A + H+L+ER RR++I+E+M+ L
Sbjct: 301 EDVEEESVGVRKSAPAKGG-----------TGSKRSRAAEVHNLSERRRRDRINEKMRAL 349
Query: 379 QDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSM 414
Q+L+P CNKV KA MLDE I Y+++LQ QV+ +SM
Sbjct: 350 QELIPNCNKVD-KASMLDEAIEYLKTLQLQVQIMSM 384
>gi|226529517|ref|NP_001151233.1| helix-loop-helix DNA-binding domain containing protein [Zea mays]
gi|195645224|gb|ACG42080.1| helix-loop-helix DNA-binding domain containing protein [Zea mays]
gi|414886017|tpg|DAA62031.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 408
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 46/108 (42%), Positives = 62/108 (57%), Gaps = 7/108 (6%)
Query: 313 GKANGNGAVKAEDEGDDKQAKANNAKPPEPPKDYIHVRARRGQATDSHSLAERVRREKIS 372
GK G A AE +K + +A P +RA+RG AT S+AERVRR KIS
Sbjct: 296 GKNKGGRAASAEMAAIEKFLQFQDAVP-------CKIRAKRGCATHPRSIAERVRRTKIS 348
Query: 373 ERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMKLASVN 420
ER++ LQ+LVP K T A MLD ++Y++ LQ+QV+ L+ AS
Sbjct: 349 ERIRKLQELVPNMEKQTNTADMLDLAVDYIKDLQKQVKVLNDGRASCT 396
>gi|357115750|ref|XP_003559649.1| PREDICTED: transcription factor PIF1-like [Brachypodium distachyon]
Length = 445
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 35/64 (54%), Positives = 50/64 (78%), Gaps = 1/64 (1%)
Query: 351 ARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVE 410
ARR +A + H+L+ER RR++I+E+MK LQ+L+P CNK T KA MLDE I Y+++LQ QV+
Sbjct: 262 ARRSRAAEVHNLSERRRRDRINEKMKALQELIPHCNK-TDKASMLDEAIEYLKTLQMQVQ 320
Query: 411 FLSM 414
+ M
Sbjct: 321 MMWM 324
>gi|371534690|gb|AEX32796.1| phytochrome-interacting factor 3 [Malus x domestica]
Length = 713
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 35/70 (50%), Positives = 53/70 (75%), Gaps = 4/70 (5%)
Query: 348 HVR---ARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQS 404
H R ++R +A + H+L+ER RR++I+E+M+ LQ+L+P CNKV KA MLDE I Y+++
Sbjct: 445 HARGMGSKRSRAAEVHNLSERRRRDRINEKMRALQELIPNCNKVD-KASMLDEAIEYLKT 503
Query: 405 LQRQVEFLSM 414
LQ QV+ +SM
Sbjct: 504 LQLQVQMMSM 513
>gi|356575289|ref|XP_003555774.1| PREDICTED: transcription factor PIF3-like [Glycine max]
Length = 633
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 51/64 (79%), Gaps = 1/64 (1%)
Query: 351 ARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVE 410
++R +A + H+L+ER RR++I+E+M+ LQ+L+P CNKV KA MLDE I Y+++LQ QV+
Sbjct: 367 SKRSRAAEVHNLSERRRRDRINEKMRALQELIPNCNKVD-KASMLDEAIEYLKTLQLQVQ 425
Query: 411 FLSM 414
+SM
Sbjct: 426 IMSM 429
>gi|297746360|emb|CBI16416.3| unnamed protein product [Vitis vinifera]
Length = 297
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 49/65 (75%)
Query: 349 VRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQ 408
+RA+RG AT S+AERVRR +ISERM+ LQ+LVP +K T + MLD ++Y++ LQ+Q
Sbjct: 219 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTSDMLDLAVDYIKDLQKQ 278
Query: 409 VEFLS 413
V+ LS
Sbjct: 279 VKTLS 283
>gi|449442685|ref|XP_004139111.1| PREDICTED: transcription factor bHLH122-like [Cucumis sativus]
Length = 437
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 36/65 (55%), Positives = 48/65 (73%)
Query: 349 VRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQ 408
+RA+RG AT S+AERVRR KISERM+ LQ+LVP +K T + MLD + Y++ LQ+Q
Sbjct: 359 LRAKRGCATHPRSIAERVRRTKISERMRKLQELVPNMDKQTNTSDMLDLAVEYIKGLQKQ 418
Query: 409 VEFLS 413
V+ LS
Sbjct: 419 VQTLS 423
>gi|449526183|ref|XP_004170093.1| PREDICTED: LOW QUALITY PROTEIN: transcription factor bHLH122-like
[Cucumis sativus]
Length = 437
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 36/65 (55%), Positives = 48/65 (73%)
Query: 349 VRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQ 408
+RA+RG AT S+AERVRR KISERM+ LQ+LVP +K T + MLD + Y++ LQ+Q
Sbjct: 359 LRAKRGCATHPRSIAERVRRTKISERMRKLQELVPNMDKQTNTSDMLDLAVEYIKGLQKQ 418
Query: 409 VEFLS 413
V+ LS
Sbjct: 419 VQTLS 423
>gi|356500459|ref|XP_003519049.1| PREDICTED: transcription factor bHLH130-like [Glycine max]
Length = 378
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 37/69 (53%), Positives = 49/69 (71%)
Query: 349 VRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQ 408
+RA+RG AT S+AERVRR +ISERM+ LQ+LVP +K T A MLD + Y++ LQ+Q
Sbjct: 294 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPHMDKQTNTADMLDLAVEYIKDLQKQ 353
Query: 409 VEFLSMKLA 417
+ LS K A
Sbjct: 354 FKTLSEKRA 362
>gi|110737548|dbj|BAF00716.1| putative bHLH transcription factor [Arabidopsis thaliana]
Length = 407
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 34/63 (53%), Positives = 50/63 (79%), Gaps = 1/63 (1%)
Query: 352 RRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEF 411
+R +A + H+L+ER RR++I+ERMK LQ+L+P CNK + KA MLDE I Y++SLQ Q++
Sbjct: 210 KRSRAAEVHNLSERKRRDRINERMKALQELIPRCNK-SDKASMLDEAIEYMKSLQLQIQM 268
Query: 412 LSM 414
+SM
Sbjct: 269 MSM 271
>gi|4580456|gb|AAD24380.1| unknown protein [Arabidopsis thaliana]
Length = 490
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 34/64 (53%), Positives = 50/64 (78%), Gaps = 1/64 (1%)
Query: 351 ARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVE 410
+R +A + H+L+ER RR++I+ERMK LQ+L+P CNK + KA MLDE I Y++SLQ Q++
Sbjct: 280 TKRSRAAEVHNLSERKRRDRINERMKALQELIPRCNK-SDKASMLDEAIEYMKSLQLQIQ 338
Query: 411 FLSM 414
+SM
Sbjct: 339 MMSM 342
>gi|30680903|ref|NP_849996.1| transcription factor PIF1 [Arabidopsis thaliana]
gi|119935961|gb|ABM06045.1| At2g20180 [Arabidopsis thaliana]
gi|330251884|gb|AEC06978.1| transcription factor PIF1 [Arabidopsis thaliana]
Length = 407
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 34/63 (53%), Positives = 50/63 (79%), Gaps = 1/63 (1%)
Query: 352 RRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEF 411
+R +A + H+L+ER RR++I+ERMK LQ+L+P CNK + KA MLDE I Y++SLQ Q++
Sbjct: 210 KRSRAAEVHNLSERKRRDRINERMKALQELIPRCNK-SDKASMLDEAIEYMKSLQLQIQM 268
Query: 412 LSM 414
+SM
Sbjct: 269 MSM 271
>gi|255543048|ref|XP_002512587.1| conserved hypothetical protein [Ricinus communis]
gi|223548548|gb|EEF50039.1| conserved hypothetical protein [Ricinus communis]
Length = 758
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 51/64 (79%), Gaps = 1/64 (1%)
Query: 351 ARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVE 410
++R +A + H+L+ER RR++I+E+M+ LQ+L+P CNKV KA MLDE I Y+++LQ QV+
Sbjct: 461 SKRSRAAEVHNLSERRRRDRINEKMRALQELIPNCNKVD-KASMLDEAIEYLKTLQLQVQ 519
Query: 411 FLSM 414
+SM
Sbjct: 520 IMSM 523
>gi|242038745|ref|XP_002466767.1| hypothetical protein SORBIDRAFT_01g013843 [Sorghum bicolor]
gi|241920621|gb|EER93765.1| hypothetical protein SORBIDRAFT_01g013843 [Sorghum bicolor]
Length = 535
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 35/64 (54%), Positives = 50/64 (78%), Gaps = 1/64 (1%)
Query: 351 ARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVE 410
ARR +A + H+L+ER RR++I+E+M+ LQ+L+P CNK T KA MLDE I Y++SLQ QV+
Sbjct: 324 ARRSRAAEVHNLSERRRRDRINEKMRALQELIPHCNK-TDKASMLDEAIEYLKSLQLQVQ 382
Query: 411 FLSM 414
+ M
Sbjct: 383 MMWM 386
>gi|357441953|ref|XP_003591254.1| Transcription factor PIF3 [Medicago truncatula]
gi|355480302|gb|AES61505.1| Transcription factor PIF3 [Medicago truncatula]
Length = 721
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 40/108 (37%), Positives = 62/108 (57%), Gaps = 18/108 (16%)
Query: 351 ARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVE 410
++R +A + H+L+ER RR++I+E+M+ LQ+L+P CNKV KA MLDE I Y+++LQ QV+
Sbjct: 464 SKRSRAAEVHNLSERRRRDRINEKMRALQELIPNCNKVD-KASMLDEAIEYLKTLQLQVQ 522
Query: 411 FLSMKLASVNTRLELNVDALMSKDIYQPNKPLPHSIFQIDSSASAFFS 458
+SM +Y P LP + + + A FS
Sbjct: 523 MMSMGAG-----------------LYMPQMMLPAGMQHMHAPHMAAFS 553
>gi|356505096|ref|XP_003521328.1| PREDICTED: transcription factor PIF1-like [Glycine max]
Length = 517
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 35/68 (51%), Positives = 52/68 (76%), Gaps = 1/68 (1%)
Query: 352 RRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEF 411
+R +A + H+L+ER RR++I+E+MK LQ+L+P CNK + KA MLDE I+Y++SLQ QV+
Sbjct: 305 KRSRAAEVHNLSERRRRDRINEKMKALQELIPRCNK-SDKASMLDEAISYLKSLQLQVQM 363
Query: 412 LSMKLASV 419
+SM V
Sbjct: 364 MSMGCGMV 371
>gi|312282767|dbj|BAJ34249.1| unnamed protein product [Thellungiella halophila]
Length = 363
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 35/64 (54%), Positives = 47/64 (73%)
Query: 349 VRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQ 408
VRA+RG AT S+AERVRR +ISERM+ LQ+LVP +K T + MLD ++Y++ LQRQ
Sbjct: 285 VRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTSDMLDLAVDYIKDLQRQ 344
Query: 409 VEFL 412
+ L
Sbjct: 345 YKIL 348
>gi|30680909|ref|NP_179608.2| transcription factor PIF1 [Arabidopsis thaliana]
gi|334184322|ref|NP_001189559.1| transcription factor PIF1 [Arabidopsis thaliana]
gi|75299660|sp|Q8GZM7.1|PIF1_ARATH RecName: Full=Transcription factor PIF1; AltName: Full=Basic
helix-loop-helix protein 15; Short=AtbHLH15; Short=bHLH
15; AltName: Full=Protein PHY-INTERACTING FACTOR 1;
AltName: Full=Protein PHYTOCHROME INTERACTING FACTOR
3-LIKE 5; AltName: Full=Transcription factor EN 101;
AltName: Full=bHLH transcription factor bHLH015
gi|26051284|gb|AAN78308.1| putative bHLH transcription factor [Arabidopsis thaliana]
gi|28372351|dbj|BAC56979.1| PIF3 like basic Helix Loop Helix protein [Arabidopsis thaliana]
gi|330251883|gb|AEC06977.1| transcription factor PIF1 [Arabidopsis thaliana]
gi|330251885|gb|AEC06979.1| transcription factor PIF1 [Arabidopsis thaliana]
Length = 478
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 34/64 (53%), Positives = 50/64 (78%), Gaps = 1/64 (1%)
Query: 351 ARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVE 410
+R +A + H+L+ER RR++I+ERMK LQ+L+P CNK + KA MLDE I Y++SLQ Q++
Sbjct: 280 TKRSRAAEVHNLSERKRRDRINERMKALQELIPRCNK-SDKASMLDEAIEYMKSLQLQIQ 338
Query: 411 FLSM 414
+SM
Sbjct: 339 MMSM 342
>gi|356537351|ref|XP_003537191.1| PREDICTED: transcription factor bHLH130-like [Glycine max]
Length = 384
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 37/69 (53%), Positives = 49/69 (71%)
Query: 349 VRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQ 408
+RA+RG AT S+AERVRR +ISERM+ LQ+LVP +K T A MLD + Y++ LQ+Q
Sbjct: 300 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVEYIKDLQKQ 359
Query: 409 VEFLSMKLA 417
+ LS K A
Sbjct: 360 FKTLSEKRA 368
>gi|357509821|ref|XP_003625199.1| Transcription factor bHLH130 [Medicago truncatula]
gi|355500214|gb|AES81417.1| Transcription factor bHLH130 [Medicago truncatula]
Length = 319
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 36/74 (48%), Positives = 51/74 (68%)
Query: 349 VRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQ 408
+RA+RG AT SLAERVRR +ISERM+ LQ++VP +K T + MLD + Y++ LQ+Q
Sbjct: 243 IRAKRGFATHPRSLAERVRRTRISERMRKLQEIVPNIDKQTCTSEMLDLAVEYIKDLQKQ 302
Query: 409 VEFLSMKLASVNTR 422
++ +S K A R
Sbjct: 303 LKTMSAKRAKCRCR 316
>gi|392513513|emb|CCE46185.1| bHLH transcription factor [Amborella trichopoda]
Length = 445
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 59/166 (35%), Positives = 87/166 (52%), Gaps = 17/166 (10%)
Query: 262 VPNDFNSRKRKAVSKGKGKETAASP--SVNNTTKVAEANAS--------ESSKNKRCKP- 310
V DF R VS G ETA V T+ ++EA S +SS + +P
Sbjct: 83 VLGDFARRNLPLVSSSVGDETAEGTERGVCGTSGLSEAGVSGRQSSIGDQSSPRRDSEPC 142
Query: 311 NEGKANGNGAVKAED-EGDDKQAKANNAKPPEPPKDYIHVRARRGQATDSHSLAERVRRE 369
+ KA+ + + D E ++ Q + P P + +R +A + H+L+E+ RR
Sbjct: 143 KKKKAHNDTDLDDLDCESEEGQEPSEEMSKPAPSRS----STKRSRAAEVHNLSEKRRRS 198
Query: 370 KISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMK 415
+I+E+MK LQ+L+P NK T KA MLDE I Y++ LQ QV+ LSMK
Sbjct: 199 RINEKMKALQNLIPNSNK-TDKASMLDEAIEYLKQLQLQVQMLSMK 243
>gi|449454115|ref|XP_004144801.1| PREDICTED: transcription factor PIF3-like [Cucumis sativus]
gi|449522990|ref|XP_004168508.1| PREDICTED: transcription factor PIF3-like [Cucumis sativus]
Length = 696
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 51/64 (79%), Gaps = 1/64 (1%)
Query: 351 ARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVE 410
++R +A + H+L+ER RR++I+E+M+ LQ+L+P CNKV KA MLDE I Y+++LQ QV+
Sbjct: 458 SKRSRAAEVHNLSERRRRDRINEKMRALQELIPNCNKVD-KASMLDEAIEYLKTLQLQVQ 516
Query: 411 FLSM 414
+SM
Sbjct: 517 IMSM 520
>gi|326528369|dbj|BAJ93366.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 488
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 34/64 (53%), Positives = 50/64 (78%), Gaps = 1/64 (1%)
Query: 351 ARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVE 410
ARR +A + H+L+ER RR++I+E+M+ LQ+L+P CNK T KA MLDE I Y+++LQ QV+
Sbjct: 311 ARRSRAAEVHNLSERRRRDRINEKMRALQELIPHCNK-TDKASMLDEAIEYLKTLQMQVQ 369
Query: 411 FLSM 414
+ M
Sbjct: 370 MMWM 373
>gi|356536868|ref|XP_003536955.1| PREDICTED: transcription factor PIF1-like [Glycine max]
Length = 491
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 35/68 (51%), Positives = 50/68 (73%), Gaps = 1/68 (1%)
Query: 352 RRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEF 411
+R A + H+L+ER RR++I+E+MK LQ+L+P CNK + KA MLDE I Y++SLQ QV+
Sbjct: 273 KRSHAAEVHNLSERRRRDRINEKMKALQELIPRCNK-SDKASMLDEAIEYLKSLQLQVQM 331
Query: 412 LSMKLASV 419
+SM V
Sbjct: 332 MSMGCGMV 339
>gi|374412422|gb|AEZ49169.1| helix-loop-helix DNA-binding domain containing protein [Wolffia
australiana]
Length = 368
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 32/63 (50%), Positives = 51/63 (80%)
Query: 352 RRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEF 411
+R ++++ H+L+ER RR++I+E+M+ LQ+LVP CNK KA ML+E+I Y++SLQ QV+
Sbjct: 217 KRSRSSEVHNLSERRRRDRINEKMRALQELVPCCNKQVDKASMLEEVIEYLKSLQMQVQA 276
Query: 412 LSM 414
+SM
Sbjct: 277 MSM 279
>gi|297832118|ref|XP_002883941.1| hypothetical protein ARALYDRAFT_319546 [Arabidopsis lyrata subsp.
lyrata]
gi|297329781|gb|EFH60200.1| hypothetical protein ARALYDRAFT_319546 [Arabidopsis lyrata subsp.
lyrata]
Length = 486
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 34/64 (53%), Positives = 50/64 (78%), Gaps = 1/64 (1%)
Query: 351 ARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVE 410
+R +A + H+L+ER RR++I+ERMK LQ+L+P CNK + KA MLDE I Y++SLQ Q++
Sbjct: 289 TKRSRAAEVHNLSERKRRDRINERMKALQELIPRCNK-SDKASMLDEAIEYMKSLQLQIQ 347
Query: 411 FLSM 414
+SM
Sbjct: 348 VMSM 351
>gi|21593792|gb|AAM65759.1| putative bHLH transcription factor [Arabidopsis thaliana]
Length = 310
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/88 (53%), Positives = 64/88 (72%), Gaps = 2/88 (2%)
Query: 349 VRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQ 408
VRARRGQATD HS+AER+RRE+I+ER++ LQ+LVP NK T +A M+DEI++YV+ L+ Q
Sbjct: 146 VRARRGQATDPHSIAERLRRERIAERIRALQELVPTVNK-TDRAAMIDEIVDYVKFLRLQ 204
Query: 409 VEFLSM-KLASVNTRLELNVDALMSKDI 435
V+ LSM +L V L D +S +
Sbjct: 205 VKVLSMSRLGGVGAVAPLVTDMPLSSSV 232
>gi|326492944|dbj|BAJ90328.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 209
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/64 (53%), Positives = 50/64 (78%), Gaps = 1/64 (1%)
Query: 351 ARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVE 410
ARR +A + H+L+ER RR++I+E+M+ LQ+L+P CNK T KA MLDE I Y+++LQ QV+
Sbjct: 32 ARRSRAAEVHNLSERRRRDRINEKMRALQELIPHCNK-TDKASMLDEAIEYLKTLQMQVQ 90
Query: 411 FLSM 414
+ M
Sbjct: 91 MMWM 94
>gi|224069945|ref|XP_002303090.1| predicted protein [Populus trichocarpa]
gi|222844816|gb|EEE82363.1| predicted protein [Populus trichocarpa]
Length = 615
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/112 (37%), Positives = 69/112 (61%), Gaps = 13/112 (11%)
Query: 309 KPNEGKANGNGAVK-AEDEGDDKQAKANNAKPPEPPKDYIHVRARRGQATDSHSLAERVR 367
KP +G+ + +K AE E D + + + + ++R +A + H+L+ER R
Sbjct: 331 KPLQGRRDAANPLKDAEFESADAKKRIRGS-----------MSSKRSRAAEVHNLSERRR 379
Query: 368 REKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMKLASV 419
R++I+E+M+ LQ+L+P CNK + KA MLDE I Y++SLQ QV+ +SM + V
Sbjct: 380 RDRINEKMRALQELIPRCNK-SDKASMLDEAIEYLKSLQLQVQMMSMGCSMV 430
>gi|6166283|gb|AAF04760.1|AF103808_1 helix-loop-helix protein 1A [Pinus taeda]
Length = 551
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/66 (59%), Positives = 50/66 (75%), Gaps = 1/66 (1%)
Query: 349 VRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVT-GKALMLDEIINYVQSLQR 407
VRA+RG AT S+AERVRR +ISERM+ LQ+LVP +K T A MLDE + YV+SLQ+
Sbjct: 468 VRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNSDKQTVNIADMLDEAVEYVKSLQK 527
Query: 408 QVEFLS 413
QV+ L+
Sbjct: 528 QVQELA 533
>gi|224145129|ref|XP_002325537.1| predicted protein [Populus trichocarpa]
gi|222862412|gb|EEE99918.1| predicted protein [Populus trichocarpa]
Length = 246
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/66 (54%), Positives = 49/66 (74%)
Query: 348 HVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQR 407
VRA+RG AT S+AERVRR +IS+R++ LQ+LVP +K T A MLDE + YV+ LQR
Sbjct: 169 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQELVPNMDKQTNTADMLDEALAYVKFLQR 228
Query: 408 QVEFLS 413
Q++ L+
Sbjct: 229 QIQELT 234
>gi|356504823|ref|XP_003521194.1| PREDICTED: transcription factor bHLH130-like [Glycine max]
Length = 387
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/69 (52%), Positives = 50/69 (72%)
Query: 349 VRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQ 408
+RA+RG AT S+AERVRR +ISER++ LQ+LVP +K T A MLD ++Y++ LQ+Q
Sbjct: 303 IRAKRGFATHPRSIAERVRRTRISERIRKLQELVPTMDKQTSTAEMLDLALDYIKDLQKQ 362
Query: 409 VEFLSMKLA 417
+ LS K A
Sbjct: 363 FKTLSDKRA 371
>gi|255544250|ref|XP_002513187.1| DNA binding protein, putative [Ricinus communis]
gi|223547685|gb|EEF49178.1| DNA binding protein, putative [Ricinus communis]
Length = 432
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/64 (54%), Positives = 46/64 (71%)
Query: 349 VRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQ 408
+RA+RG AT S+AERVRR +ISERM+ LQDL P +K T A MLD + Y++ LQ+Q
Sbjct: 350 IRAKRGFATHPRSIAERVRRTRISERMRKLQDLFPNMDKQTNTADMLDLAVEYIKDLQKQ 409
Query: 409 VEFL 412
V+ L
Sbjct: 410 VKTL 413
>gi|297827895|ref|XP_002881830.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297327669|gb|EFH58089.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 359
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/64 (53%), Positives = 47/64 (73%)
Query: 349 VRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQ 408
+RA+RG AT S+AERVRR +ISERM+ LQ+LVP +K T + MLD ++Y++ LQRQ
Sbjct: 279 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTSDMLDLAVDYIKDLQRQ 338
Query: 409 VEFL 412
+ L
Sbjct: 339 YKIL 342
>gi|42569863|ref|NP_181757.2| transcription factor bHLH130 [Arabidopsis thaliana]
gi|75288858|sp|Q66GR3.1|BH130_ARATH RecName: Full=Transcription factor bHLH130; AltName: Full=Basic
helix-loop-helix protein 130; Short=AtbHLH130;
Short=bHLH 130; AltName: Full=Transcription factor EN
69; AltName: Full=bHLH transcription factor bHLH130
gi|51536448|gb|AAU05462.1| At2g42280 [Arabidopsis thaliana]
gi|52421281|gb|AAU45210.1| At2g42280 [Arabidopsis thaliana]
gi|110737862|dbj|BAF00869.1| putative bHLH transcription factor [Arabidopsis thaliana]
gi|330255005|gb|AEC10099.1| transcription factor bHLH130 [Arabidopsis thaliana]
Length = 359
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/64 (53%), Positives = 47/64 (73%)
Query: 349 VRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQ 408
+RA+RG AT S+AERVRR +ISERM+ LQ+LVP +K T + MLD ++Y++ LQRQ
Sbjct: 279 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTSDMLDLAVDYIKDLQRQ 338
Query: 409 VEFL 412
+ L
Sbjct: 339 YKIL 342
>gi|238008194|gb|ACR35132.1| unknown [Zea mays]
gi|413946840|gb|AFW79489.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 638
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 50/64 (78%), Gaps = 1/64 (1%)
Query: 351 ARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVE 410
A+R + + H+L+ER RR++I+E+M+ LQ+L+P CNK+ KA MLDE I Y+++LQ QV+
Sbjct: 380 AKRSRTAEVHNLSERRRRDRINEKMRALQELIPNCNKID-KASMLDEAIEYLKTLQLQVQ 438
Query: 411 FLSM 414
+SM
Sbjct: 439 MMSM 442
>gi|255583282|ref|XP_002532405.1| DNA binding protein, putative [Ricinus communis]
gi|223527901|gb|EEF29990.1| DNA binding protein, putative [Ricinus communis]
Length = 355
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 48/65 (73%)
Query: 349 VRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQ 408
+RA+RG AT S+AERVRR +ISERM+ LQ+LVP +K T A MLD ++Y++ LQ+Q
Sbjct: 271 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQKQ 330
Query: 409 VEFLS 413
+ LS
Sbjct: 331 YKTLS 335
>gi|108710019|gb|ABF97814.1| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
Length = 481
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/64 (53%), Positives = 50/64 (78%), Gaps = 1/64 (1%)
Query: 351 ARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVE 410
ARR +A + H+L+ER RR++I+E+M+ LQ+L+P CNK T KA MLDE I Y++SLQ Q++
Sbjct: 314 ARRSRAAEVHNLSERRRRDRINEKMRALQELIPHCNK-TDKASMLDEAIEYLKSLQLQLQ 372
Query: 411 FLSM 414
+ M
Sbjct: 373 MMWM 376
>gi|15217533|ref|NP_172424.1| transcription factor PIF3 [Arabidopsis thaliana]
gi|30681206|ref|NP_849626.1| transcription factor PIF3 [Arabidopsis thaliana]
gi|20532207|sp|O80536.1|PIF3_ARATH RecName: Full=Transcription factor PIF3; AltName: Full=Basic
helix-loop-helix protein 8; Short=AtbHLH8; Short=bHLH 8;
AltName: Full=Phytochrome-associated protein 3; AltName:
Full=Phytochrome-interacting factor 3; AltName:
Full=Transcription factor EN 100; AltName: Full=bHLH
transcription factor bHLH008
gi|18026964|gb|AAL55715.1|AF251693_1 putative transcription factor BHLH8 [Arabidopsis thaliana]
gi|3482928|gb|AAC33213.1| Unknown protein [Arabidopsis thaliana]
gi|3929586|gb|AAC95156.1| phytochrome interacting factor 3 [Arabidopsis thaliana]
gi|26449609|dbj|BAC41930.1| putative transcription factor BHLH8 [Arabidopsis thaliana]
gi|332190336|gb|AEE28457.1| transcription factor PIF3 [Arabidopsis thaliana]
gi|332190337|gb|AEE28458.1| transcription factor PIF3 [Arabidopsis thaliana]
Length = 524
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 51/64 (79%), Gaps = 1/64 (1%)
Query: 351 ARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVE 410
++R ++ + H+L+ER RR++I+E+M+ LQ+L+P CNKV KA MLDE I Y++SLQ QV+
Sbjct: 339 SKRSRSAEVHNLSERRRRDRINEKMRALQELIPNCNKVD-KASMLDEAIEYLKSLQLQVQ 397
Query: 411 FLSM 414
+SM
Sbjct: 398 IMSM 401
>gi|224136007|ref|XP_002327358.1| predicted protein [Populus trichocarpa]
gi|222835728|gb|EEE74163.1| predicted protein [Populus trichocarpa]
Length = 264
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 50/65 (76%)
Query: 349 VRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQ 408
+RA+RG AT S+AERVRR +IS+R++ LQ+LVP +K T A ML+E ++YV+ LQRQ
Sbjct: 188 IRAKRGCATHPRSIAERVRRTRISDRIRKLQELVPNMDKQTNTADMLEEAVDYVKFLQRQ 247
Query: 409 VEFLS 413
++ L+
Sbjct: 248 IQELT 252
>gi|2673918|gb|AAB88652.1| unknown protein [Arabidopsis thaliana]
Length = 380
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/64 (53%), Positives = 47/64 (73%)
Query: 349 VRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQ 408
+RA+RG AT S+AERVRR +ISERM+ LQ+LVP +K T + MLD ++Y++ LQRQ
Sbjct: 300 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTSDMLDLAVDYIKDLQRQ 359
Query: 409 VEFL 412
+ L
Sbjct: 360 YKIL 363
>gi|108710018|gb|ABF97813.1| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
Length = 485
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/64 (53%), Positives = 50/64 (78%), Gaps = 1/64 (1%)
Query: 351 ARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVE 410
ARR +A + H+L+ER RR++I+E+M+ LQ+L+P CNK T KA MLDE I Y++SLQ Q++
Sbjct: 314 ARRSRAAEVHNLSERRRRDRINEKMRALQELIPHCNK-TDKASMLDEAIEYLKSLQLQLQ 372
Query: 411 FLSM 414
+ M
Sbjct: 373 MMWM 376
>gi|297852830|ref|XP_002894296.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297340138|gb|EFH70555.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 378
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/64 (56%), Positives = 45/64 (70%)
Query: 349 VRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQ 408
+RA+RG AT S+AERVRR KISERM+ LQDLVP + T A MLD + Y++ LQ Q
Sbjct: 303 IRAKRGCATHPRSIAERVRRTKISERMRKLQDLVPNMDTQTNTADMLDLAVQYIKDLQEQ 362
Query: 409 VEFL 412
V+ L
Sbjct: 363 VKTL 366
>gi|255560265|ref|XP_002521150.1| Phytochrome-interacting factor, putative [Ricinus communis]
gi|223539719|gb|EEF41301.1| Phytochrome-interacting factor, putative [Ricinus communis]
Length = 572
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/68 (50%), Positives = 52/68 (76%), Gaps = 1/68 (1%)
Query: 352 RRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEF 411
+R +A + H+L+ER RR++I+E+M+ LQ+L+P CNK + KA MLDE I Y++SLQ QV+
Sbjct: 357 KRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLDEAIEYLKSLQLQVQM 415
Query: 412 LSMKLASV 419
+SM + V
Sbjct: 416 MSMGCSMV 423
>gi|449443927|ref|XP_004139727.1| PREDICTED: transcription factor PIF1-like [Cucumis sativus]
Length = 529
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/63 (53%), Positives = 50/63 (79%), Gaps = 1/63 (1%)
Query: 352 RRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEF 411
+R +A + H+L+ER RR++I+E+MK LQ+L+P CNK T KA MLDE I Y+++LQ QV+
Sbjct: 313 KRSRAAEVHNLSERRRRDRINEKMKALQELIPRCNK-TDKASMLDEAIEYLKTLQLQVQM 371
Query: 412 LSM 414
+SM
Sbjct: 372 MSM 374
>gi|326514040|dbj|BAJ92170.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 341
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/129 (38%), Positives = 71/129 (55%), Gaps = 14/129 (10%)
Query: 285 SPSVNNTTKVAEANASESSKNKRCKPNEGKANGNGAVKAED-EGDDKQAKANNAKPPEPP 343
S S TT A + S +SK K+C A G V +D E + A+ P
Sbjct: 178 SASATLTTSSAWSRPSGASKRKQCD----GAESPGEVMQQDVESESADVTCETAQKP--- 230
Query: 344 KDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQ 403
A+R +A H+L+ER RR++I+E+M+ LQ+LVP CNK T KA MLDE I Y++
Sbjct: 231 -----ATAKRRRAAQVHNLSERRRRDRINEKMRALQELVPHCNK-TDKASMLDEAIEYLK 284
Query: 404 SLQRQVEFL 412
SLQ Q++ +
Sbjct: 285 SLQLQLQVM 293
>gi|18403381|ref|NP_564583.1| transcription factor bHLH122 [Arabidopsis thaliana]
gi|75308807|sp|Q9C690.1|BH122_ARATH RecName: Full=Transcription factor bHLH122; AltName: Full=Basic
helix-loop-helix protein 122; Short=AtbHLH122;
Short=bHLH 122; AltName: Full=Transcription factor EN
70; AltName: Full=bHLH transcription factor bHLH122
gi|12320788|gb|AAG50543.1|AC079828_14 unknown protein [Arabidopsis thaliana]
gi|14334500|gb|AAK59447.1| unknown protein [Arabidopsis thaliana]
gi|17104811|gb|AAL34294.1| unknown protein [Arabidopsis thaliana]
gi|332194505|gb|AEE32626.1| transcription factor bHLH122 [Arabidopsis thaliana]
Length = 379
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/64 (56%), Positives = 45/64 (70%)
Query: 349 VRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQ 408
+RA+RG AT S+AERVRR KISERM+ LQDLVP + T A MLD + Y++ LQ Q
Sbjct: 304 IRAKRGCATHPRSIAERVRRTKISERMRKLQDLVPNMDTQTNTADMLDLAVQYIKDLQEQ 363
Query: 409 VEFL 412
V+ L
Sbjct: 364 VKAL 367
>gi|226509284|ref|NP_001148741.1| DNA binding protein [Zea mays]
gi|195621758|gb|ACG32709.1| DNA binding protein [Zea mays]
gi|414887073|tpg|DAA63087.1| TPA: putative HLH DNA-binding domain superfamily protein isoform 1
[Zea mays]
gi|414887074|tpg|DAA63088.1| TPA: putative HLH DNA-binding domain superfamily protein isoform 2
[Zea mays]
Length = 374
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/64 (53%), Positives = 48/64 (75%)
Query: 349 VRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQ 408
+RA+RG AT S+AERVRR KISER++ LQ+LVP +K T + MLD ++Y++ LQ+Q
Sbjct: 292 IRAKRGCATHPRSIAERVRRTKISERIRKLQELVPNMDKQTNTSDMLDLAVDYIKDLQKQ 351
Query: 409 VEFL 412
V+ L
Sbjct: 352 VKVL 355
>gi|414590533|tpg|DAA41104.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 367
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/64 (53%), Positives = 48/64 (75%)
Query: 349 VRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQ 408
+RA+RG AT S+AERVRR KISER++ LQ+LVP +K T + MLD ++Y++ LQ+Q
Sbjct: 285 IRAKRGCATHPRSIAERVRRTKISERIRKLQELVPNMDKQTNTSDMLDLAVDYIKELQKQ 344
Query: 409 VEFL 412
V+ L
Sbjct: 345 VKVL 348
>gi|297843750|ref|XP_002889756.1| hypothetical protein ARALYDRAFT_471048 [Arabidopsis lyrata subsp.
lyrata]
gi|297335598|gb|EFH66015.1| hypothetical protein ARALYDRAFT_471048 [Arabidopsis lyrata subsp.
lyrata]
Length = 522
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 51/64 (79%), Gaps = 1/64 (1%)
Query: 351 ARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVE 410
++R ++ + H+L+ER RR++I+E+M+ LQ+L+P CNKV KA MLDE I Y++SLQ QV+
Sbjct: 337 SKRSRSAEVHNLSERRRRDRINEKMRALQELIPNCNKVD-KASMLDEAIEYLKSLQLQVQ 395
Query: 411 FLSM 414
+SM
Sbjct: 396 IMSM 399
>gi|118488234|gb|ABK95936.1| unknown [Populus trichocarpa]
Length = 283
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/58 (62%), Positives = 43/58 (74%), Gaps = 2/58 (3%)
Query: 331 QAKANNAKPPEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKV 388
QA +N P P+ VRARRGQATD HS+AER+RRE+I+ERMK LQ+LVP NKV
Sbjct: 225 QASGSNGGAPAQPRQ--RVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKV 280
>gi|238015240|gb|ACR38655.1| unknown [Zea mays]
Length = 435
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 50/64 (78%), Gaps = 1/64 (1%)
Query: 351 ARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVE 410
A+R + + H+L+ER RR++I+E+M+ LQ+L+P CNK+ KA MLDE I Y+++LQ QV+
Sbjct: 177 AKRSRTAEVHNLSERRRRDRINEKMRALQELIPNCNKID-KASMLDEAIEYLKTLQLQVQ 235
Query: 411 FLSM 414
+SM
Sbjct: 236 MMSM 239
>gi|414869403|tpg|DAA47960.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 380
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/72 (51%), Positives = 51/72 (70%)
Query: 349 VRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQ 408
VRA+RG AT S+AERVRR KISER++ LQ+LVP +K T + MLD ++Y++ LQ+Q
Sbjct: 297 VRAKRGCATHPRSIAERVRRTKISERIRKLQELVPDMDKQTNTSDMLDLAVDYIKDLQKQ 356
Query: 409 VEFLSMKLASVN 420
V+ L+ AS
Sbjct: 357 VKALNESRASCT 368
>gi|226505986|ref|NP_001147910.1| DNA binding protein [Zea mays]
gi|195614520|gb|ACG29090.1| DNA binding protein [Zea mays]
Length = 380
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/72 (51%), Positives = 51/72 (70%)
Query: 349 VRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQ 408
VRA+RG AT S+AERVRR KISER++ LQ+LVP +K T + MLD ++Y++ LQ+Q
Sbjct: 297 VRAKRGCATHPRSIAERVRRTKISERIRKLQELVPDMDKQTNTSDMLDLAVDYIKDLQKQ 356
Query: 409 VEFLSMKLASVN 420
V+ L+ AS
Sbjct: 357 VKALNESRASCT 368
>gi|414589820|tpg|DAA40391.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 244
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 47/65 (72%)
Query: 348 HVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQR 407
+RA+RG AT S+AERVRR KISER++ LQ+LVP K T A MLD ++Y++ LQ+
Sbjct: 159 KIRAKRGCATHPRSIAERVRRTKISERIRKLQELVPNMEKQTNTADMLDLAVDYIKDLQK 218
Query: 408 QVEFL 412
QV+ L
Sbjct: 219 QVKVL 223
>gi|125545009|gb|EAY91148.1| hypothetical protein OsI_12756 [Oryza sativa Indica Group]
Length = 469
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/64 (53%), Positives = 50/64 (78%), Gaps = 1/64 (1%)
Query: 351 ARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVE 410
ARR +A + H+L+ER RR++I+E+M+ LQ+L+P CNK T KA MLDE I Y++SLQ Q++
Sbjct: 295 ARRSRAAEVHNLSERRRRDRINEKMRALQELIPHCNK-TDKASMLDEAIEYLKSLQLQLQ 353
Query: 411 FLSM 414
+ M
Sbjct: 354 MMWM 357
>gi|42567227|ref|NP_194608.3| transcription factor bHLH23 [Arabidopsis thaliana]
gi|75313939|sp|Q9SVU6.1|BH023_ARATH RecName: Full=Transcription factor bHLH23; AltName: Full=Basic
helix-loop-helix protein 23; Short=AtbHLH23; Short=bHLH
23; AltName: Full=Transcription factor EN 107; AltName:
Full=bHLH transcription factor bHLH023
gi|4218119|emb|CAA22973.1| putative protein [Arabidopsis thaliana]
gi|7269734|emb|CAB81467.1| putative protein [Arabidopsis thaliana]
gi|225898825|dbj|BAH30543.1| hypothetical protein [Arabidopsis thaliana]
gi|332660145|gb|AEE85545.1| transcription factor bHLH23 [Arabidopsis thaliana]
Length = 413
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 81/167 (48%), Gaps = 4/167 (2%)
Query: 250 ANSQEESSVSEQVPNDFNSRKRKAVSKGKGKETAASPSVNNTTKVAEANASESSKNKRCK 309
+NS SS +E +P + R V+ G + T A P + K + + CK
Sbjct: 171 SNSTLLSSATESIPATHGTESRATVTGGVSR-TFAVPGLGPRGKAVAIETAGTQSWGLCK 229
Query: 310 PNEGKANGNGAVKAE--DEGDDKQAKANNAKPPEPPKDYIHVRARRGQATDSHSLAERVR 367
A + + DE K + N + + ++R +A H L+ER R
Sbjct: 230 AETEPVQRQPATETDITDERKRKTREETNVENQGTEEARDSTSSKRSRAAIMHKLSERRR 289
Query: 368 REKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSM 414
R+KI+E MK LQ+L+P C K T ++ MLD++I YV+SLQ Q++ SM
Sbjct: 290 RQKINEMMKALQELLPRCTK-TDRSSMLDDVIEYVKSLQSQIQMFSM 335
>gi|4093153|gb|AAC99771.1| phytochrome-associated protein 3 [Arabidopsis thaliana]
Length = 524
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 50/64 (78%), Gaps = 1/64 (1%)
Query: 351 ARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVE 410
++R + + H+L+ER RR++I+E+M+ LQ+L+P CNKV KA MLDE I Y++SLQ QV+
Sbjct: 339 SKRSRLAEVHNLSERRRRDRINEKMRALQELIPNCNKVD-KASMLDEAIEYLKSLQLQVQ 397
Query: 411 FLSM 414
+SM
Sbjct: 398 IMSM 401
>gi|147862096|emb|CAN80884.1| hypothetical protein VITISV_018653 [Vitis vinifera]
Length = 446
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/62 (53%), Positives = 47/62 (75%)
Query: 349 VRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQ 408
+RA+RG AT S+AERVRR +ISERM+ LQ+LVP +K T + MLD ++Y++ LQ+Q
Sbjct: 362 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTSDMLDLAVDYIKDLQKQ 421
Query: 409 VE 410
V+
Sbjct: 422 VK 423
>gi|297809111|ref|XP_002872439.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297318276|gb|EFH48698.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 263
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/67 (52%), Positives = 49/67 (73%)
Query: 347 IHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQ 406
VRA+RG AT S+AERVRR +IS+R++ LQ+LVP +K T A ML+E + YV+ LQ
Sbjct: 184 FRVRAKRGCATHPRSIAERVRRTRISDRIRKLQELVPNMDKQTNTADMLEEAVEYVKVLQ 243
Query: 407 RQVEFLS 413
RQ++ L+
Sbjct: 244 RQIQELT 250
>gi|15233768|ref|NP_192657.1| transcription factor bHLH81 [Arabidopsis thaliana]
gi|75311758|sp|Q9M0R0.1|BH081_ARATH RecName: Full=Transcription factor bHLH81; AltName: Full=Basic
helix-loop-helix protein 81; Short=AtbHLH81; Short=bHLH
81; AltName: Full=Transcription factor EN 72; AltName:
Full=bHLH transcription factor bHLH081
gi|7267561|emb|CAB78042.1| putative protein [Arabidopsis thaliana]
gi|34146832|gb|AAQ62424.1| At4g09180 [Arabidopsis thaliana]
gi|110741264|dbj|BAF02182.1| putative bHLH transcription factor [Arabidopsis thaliana]
gi|332657332|gb|AEE82732.1| transcription factor bHLH81 [Arabidopsis thaliana]
Length = 262
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/67 (52%), Positives = 49/67 (73%)
Query: 347 IHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQ 406
VRA+RG AT S+AERVRR +IS+R++ LQ+LVP +K T A ML+E + YV+ LQ
Sbjct: 182 FRVRAKRGCATHPRSIAERVRRTRISDRIRKLQELVPNMDKQTNTADMLEEAVEYVKVLQ 241
Query: 407 RQVEFLS 413
RQ++ L+
Sbjct: 242 RQIQELT 248
>gi|388517565|gb|AFK46844.1| unknown [Medicago truncatula]
Length = 194
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/65 (55%), Positives = 48/65 (73%)
Query: 349 VRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQ 408
+RA+RG AT S+AERVRR +IS+R++ LQ+LVP +K T A MLDE + YV+ LQ Q
Sbjct: 118 IRAKRGFATHPRSIAERVRRTRISDRIRKLQELVPNMDKQTNTAEMLDEAVAYVKFLQNQ 177
Query: 409 VEFLS 413
+E LS
Sbjct: 178 IEELS 182
>gi|297848526|ref|XP_002892144.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297337986|gb|EFH68403.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 306
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/108 (46%), Positives = 71/108 (65%), Gaps = 10/108 (9%)
Query: 316 NGNGAVKAEDEGDDKQAKANNAKP---PEPPKDYIH------VRARRGQATDSHSLAERV 366
+G G +D D++ + +P P PP + VRARRGQATD HS+AER+
Sbjct: 106 HGTGKRFQDDVLDNRMKPVFHGQPMSQPAPPMPHQQSTIRPRVRARRGQATDPHSIAERL 165
Query: 367 RREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSM 414
RRE+I+ER++ LQ+LVP NK T +A M+DEI++YV+ L+ QV+ LSM
Sbjct: 166 RRERIAERIRALQELVPTVNK-TDRAAMIDEIVDYVKFLRLQVKVLSM 212
>gi|351722090|ref|NP_001236464.1| uncharacterized protein LOC100527723 [Glycine max]
gi|255633050|gb|ACU16880.1| unknown [Glycine max]
Length = 157
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/65 (56%), Positives = 49/65 (75%)
Query: 349 VRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQ 408
VRA+RG AT S+AERVRR +IS+R++ LQ+LVP +K T A MLDE + YV+ LQ+Q
Sbjct: 81 VRAKRGCATHPRSIAERVRRTRISDRIRKLQELVPNMDKQTNTADMLDEAVAYVKFLQKQ 140
Query: 409 VEFLS 413
+E LS
Sbjct: 141 IEELS 145
>gi|356525636|ref|XP_003531430.1| PREDICTED: transcription factor bHLH130-like [Glycine max]
Length = 450
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 46/65 (70%)
Query: 349 VRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQ 408
+RA+RG AT S+AERVRR +ISER+K LQDL P K T A MLD + Y++ LQ++
Sbjct: 366 IRAKRGFATHPRSIAERVRRTRISERIKKLQDLFPKSEKQTSTADMLDLAVEYIKDLQQK 425
Query: 409 VEFLS 413
V+ LS
Sbjct: 426 VKILS 430
>gi|108711402|gb|ABF99197.1| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
Length = 421
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/63 (52%), Positives = 49/63 (77%), Gaps = 1/63 (1%)
Query: 352 RRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEF 411
RR +A + H+L+ER RR++I+E+M+ LQ+L+P CNK T KA +LDE I Y++SLQ QV+
Sbjct: 228 RRTRAAEVHNLSERRRRDRINEKMRALQELIPHCNK-TDKASILDEAIEYLKSLQMQVQI 286
Query: 412 LSM 414
+ M
Sbjct: 287 MWM 289
>gi|115479871|ref|NP_001063529.1| Os09g0487900 [Oryza sativa Japonica Group]
gi|113631762|dbj|BAF25443.1| Os09g0487900 [Oryza sativa Japonica Group]
Length = 401
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/64 (53%), Positives = 47/64 (73%)
Query: 349 VRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQ 408
+RA+RG AT S+AERVRR +ISER++ LQ+LVP K T A MLD ++Y++ LQ+Q
Sbjct: 319 IRAKRGCATHPRSIAERVRRTRISERIRKLQELVPNMEKQTNTADMLDLAVDYIKELQKQ 378
Query: 409 VEFL 412
V+ L
Sbjct: 379 VKVL 382
>gi|115455729|ref|NP_001051465.1| Os03g0782500 [Oryza sativa Japonica Group]
gi|108711401|gb|ABF99196.1| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
gi|108711403|gb|ABF99198.1| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
gi|113549936|dbj|BAF13379.1| Os03g0782500 [Oryza sativa Japonica Group]
gi|215740666|dbj|BAG97322.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 410
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/63 (52%), Positives = 49/63 (77%), Gaps = 1/63 (1%)
Query: 352 RRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEF 411
RR +A + H+L+ER RR++I+E+M+ LQ+L+P CNK T KA +LDE I Y++SLQ QV+
Sbjct: 217 RRTRAAEVHNLSERRRRDRINEKMRALQELIPHCNK-TDKASILDEAIEYLKSLQMQVQI 275
Query: 412 LSM 414
+ M
Sbjct: 276 MWM 278
>gi|449515805|ref|XP_004164938.1| PREDICTED: transcription factor PIF1-like [Cucumis sativus]
Length = 549
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/69 (49%), Positives = 50/69 (72%), Gaps = 1/69 (1%)
Query: 351 ARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVE 410
+R +A + H+L+ER RR++I+E+MK LQ+L+P CNK KA MLDE I Y+++LQ QV+
Sbjct: 297 TKRSRAAEVHNLSERRRRDRINEKMKALQELIPRCNKA-DKASMLDEAIEYLKTLQLQVQ 355
Query: 411 FLSMKLASV 419
+SM V
Sbjct: 356 MMSMGCGMV 364
>gi|242037911|ref|XP_002466350.1| hypothetical protein SORBIDRAFT_01g006190 [Sorghum bicolor]
gi|241920204|gb|EER93348.1| hypothetical protein SORBIDRAFT_01g006190 [Sorghum bicolor]
Length = 424
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/67 (50%), Positives = 50/67 (74%), Gaps = 1/67 (1%)
Query: 348 HVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQR 407
H RR +A + H+L+ER RR++I+E+M+ LQ+L+P CNK T KA +LDE I Y++SLQ
Sbjct: 223 HGPKRRTRAAEVHNLSERRRRDRINEKMRALQELIPHCNK-TDKASILDETIEYLKSLQM 281
Query: 408 QVEFLSM 414
QV+ + M
Sbjct: 282 QVQIMWM 288
>gi|312281971|dbj|BAJ33851.1| unnamed protein product [Thellungiella halophila]
Length = 310
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/88 (52%), Positives = 63/88 (71%), Gaps = 2/88 (2%)
Query: 349 VRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQ 408
VRARRGQATD HS+AER+RRE+I+ER++ LQ+LVP NK T +A M+DEI++YV+ L+ Q
Sbjct: 146 VRARRGQATDPHSIAERLRRERIAERIRALQELVPTVNK-TDRAAMIDEIVDYVKFLRLQ 204
Query: 409 VEFLSM-KLASVNTRLELNVDALMSKDI 435
V+ LSM +L L D +S +
Sbjct: 205 VKVLSMSRLGGAGAVAPLVTDMPLSSSV 232
>gi|449468728|ref|XP_004152073.1| PREDICTED: transcription factor PIF1-like [Cucumis sativus]
Length = 553
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/69 (49%), Positives = 50/69 (72%), Gaps = 1/69 (1%)
Query: 351 ARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVE 410
+R +A + H+L+ER RR++I+E+MK LQ+L+P CNK KA MLDE I Y+++LQ QV+
Sbjct: 301 TKRSRAAEVHNLSERRRRDRINEKMKALQELIPRCNKA-DKASMLDEAIEYLKTLQLQVQ 359
Query: 411 FLSMKLASV 419
+SM V
Sbjct: 360 MMSMGCGMV 368
>gi|125564183|gb|EAZ09563.1| hypothetical protein OsI_31842 [Oryza sativa Indica Group]
Length = 400
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/64 (53%), Positives = 47/64 (73%)
Query: 349 VRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQ 408
+RA+RG AT S+AERVRR +ISER++ LQ+LVP K T A MLD ++Y++ LQ+Q
Sbjct: 318 IRAKRGCATHPRSIAERVRRTRISERIRKLQELVPNMEKQTNTADMLDLAVDYIKELQKQ 377
Query: 409 VEFL 412
V+ L
Sbjct: 378 VKVL 381
>gi|168045219|ref|XP_001775076.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673663|gb|EDQ60183.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 73
Score = 73.2 bits (178), Expect = 4e-10, Method: Composition-based stats.
Identities = 40/71 (56%), Positives = 48/71 (67%)
Query: 347 IHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQ 406
+ RA+RG AT S+AERVRR +ISERMK LQDLVP K T A MLDE + YV+SLQ
Sbjct: 3 MRARAKRGCATHPRSIAERVRRTRISERMKKLQDLVPNMEKTTNTADMLDETVEYVKSLQ 62
Query: 407 RQVEFLSMKLA 417
+V L +A
Sbjct: 63 VKVSELQETIA 73
>gi|20127058|gb|AAM10948.1|AF488592_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 310
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 46/88 (52%), Positives = 63/88 (71%), Gaps = 2/88 (2%)
Query: 349 VRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQ 408
VRARRGQATD HS+AER+RRE+I+ER++ LQ+LVP NK T +A M+DEI++YV+ L+ Q
Sbjct: 146 VRARRGQATDPHSIAERLRRERIAERIRALQELVPTVNK-TDRAAMIDEIVDYVKFLRLQ 204
Query: 409 VEFLSM-KLASVNTRLELNVDALMSKDI 435
V+ LSM +L L D +S +
Sbjct: 205 VKVLSMSRLGGAGAVAPLVTDMPLSSSV 232
>gi|414869406|tpg|DAA47963.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 277
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 37/73 (50%), Positives = 51/73 (69%)
Query: 349 VRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQ 408
VRA+RG AT S+AERVRR KISER++ LQ+LVP +K T + MLD ++Y++ LQ+Q
Sbjct: 194 VRAKRGCATHPRSIAERVRRTKISERIRKLQELVPDMDKQTNTSDMLDLAVDYIKDLQKQ 253
Query: 409 VEFLSMKLASVNT 421
V+ L+ AS
Sbjct: 254 VKALNESRASCTC 266
>gi|56784181|dbj|BAD81566.1| putative BP-5 protein [Oryza sativa Japonica Group]
Length = 565
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 49/63 (77%), Gaps = 1/63 (1%)
Query: 352 RRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEF 411
+R + + H+L+ER RR++I+E+M+ LQ+L+P CNK+ KA MLDE I Y+++LQ QV+
Sbjct: 309 KRSRTAEVHNLSERRRRDRINEKMRALQELIPNCNKID-KASMLDEAIEYLKTLQLQVQM 367
Query: 412 LSM 414
+SM
Sbjct: 368 MSM 370
>gi|108862947|gb|ABA99362.2| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
Length = 446
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/64 (53%), Positives = 50/64 (78%), Gaps = 1/64 (1%)
Query: 351 ARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVE 410
A+R +A + H+L+ER RR++I+E+MK LQ+L+P CNK T KA MLDE I Y++SLQ Q++
Sbjct: 265 AKRRRAAEVHNLSERRRRDRINEKMKALQELIPHCNK-TDKASMLDEAIEYLKSLQLQLQ 323
Query: 411 FLSM 414
+ M
Sbjct: 324 MMWM 327
>gi|218193849|gb|EEC76276.1| hypothetical protein OsI_13762 [Oryza sativa Indica Group]
Length = 505
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 33/63 (52%), Positives = 49/63 (77%), Gaps = 1/63 (1%)
Query: 352 RRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEF 411
RR +A + H+L+ER RR++I+E+M+ LQ+L+P CNK T KA +LDE I Y++SLQ QV+
Sbjct: 333 RRTRAAEVHNLSERRRRDRINEKMRALQELIPHCNK-TDKASILDEAIEYLKSLQMQVQI 391
Query: 412 LSM 414
+ M
Sbjct: 392 MWM 394
>gi|115489518|ref|NP_001067246.1| Os12g0610200 [Oryza sativa Japonica Group]
gi|77556567|gb|ABA99363.1| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
gi|108862946|gb|ABA99364.2| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
gi|113649753|dbj|BAF30265.1| Os12g0610200 [Oryza sativa Japonica Group]
gi|125537356|gb|EAY83844.1| hypothetical protein OsI_39060 [Oryza sativa Indica Group]
gi|215694924|dbj|BAG90115.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 445
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/64 (53%), Positives = 50/64 (78%), Gaps = 1/64 (1%)
Query: 351 ARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVE 410
A+R +A + H+L+ER RR++I+E+MK LQ+L+P CNK T KA MLDE I Y++SLQ Q++
Sbjct: 265 AKRRRAAEVHNLSERRRRDRINEKMKALQELIPHCNK-TDKASMLDEAIEYLKSLQLQLQ 323
Query: 411 FLSM 414
+ M
Sbjct: 324 MMWM 327
>gi|18411987|ref|NP_567245.1| transcription factor UNE12 [Arabidopsis thaliana]
gi|79324985|ref|NP_001031577.1| transcription factor UNE12 [Arabidopsis thaliana]
gi|75277341|sp|O22768.2|UNE12_ARATH RecName: Full=Transcription factor UNE12; AltName: Full=Basic
helix-loop-helix protein 59; Short=AtbHLH59; Short=bHLH
59; AltName: Full=Protein UNFERTILIZED EMBRYO SAC 12;
AltName: Full=Transcription factor EN 93; AltName:
Full=bHLH transcription factor bHLH059
gi|13605859|gb|AAK32915.1|AF367328_1 AT4g02590/T10P11_13 [Arabidopsis thaliana]
gi|3892050|gb|AAC78259.1| hypothetical protein [Arabidopsis thaliana]
gi|7269019|emb|CAB80752.1| hypothetical protein [Arabidopsis thaliana]
gi|23506061|gb|AAN28890.1| At4g02590/T10P11_13 [Arabidopsis thaliana]
gi|222422973|dbj|BAH19471.1| AT4G02590 [Arabidopsis thaliana]
gi|332656799|gb|AEE82199.1| transcription factor UNE12 [Arabidopsis thaliana]
gi|332656800|gb|AEE82200.1| transcription factor UNE12 [Arabidopsis thaliana]
Length = 310
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 46/88 (52%), Positives = 63/88 (71%), Gaps = 2/88 (2%)
Query: 349 VRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQ 408
VRARRGQATD HS+AER+RRE+I+ER++ LQ+LVP NK T +A M+DEI++YV+ L+ Q
Sbjct: 146 VRARRGQATDPHSIAERLRRERIAERIRALQELVPTVNK-TDRAAMIDEIVDYVKFLRLQ 204
Query: 409 VEFLSM-KLASVNTRLELNVDALMSKDI 435
V+ LSM +L L D +S +
Sbjct: 205 VKVLSMSRLGGAGAVAPLVTDMPLSSSV 232
>gi|222625912|gb|EEE60044.1| hypothetical protein OsJ_12829 [Oryza sativa Japonica Group]
Length = 489
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 33/63 (52%), Positives = 49/63 (77%), Gaps = 1/63 (1%)
Query: 352 RRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEF 411
RR +A + H+L+ER RR++I+E+M+ LQ+L+P CNK T KA +LDE I Y++SLQ QV+
Sbjct: 317 RRTRAAEVHNLSERRRRDRINEKMRALQELIPHCNK-TDKASILDEAIEYLKSLQMQVQI 375
Query: 412 LSM 414
+ M
Sbjct: 376 MWM 378
>gi|359487434|ref|XP_003633592.1| PREDICTED: transcription factor bHLH130-like [Vitis vinifera]
Length = 408
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/64 (53%), Positives = 46/64 (71%)
Query: 349 VRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQ 408
+RA+RG AT S+AERVRR +ISERM+ LQ+L P +K T A MLD + Y++ LQ+Q
Sbjct: 333 IRAKRGCATHPRSIAERVRRTRISERMRKLQELFPNMDKQTNTADMLDLAVEYIKDLQKQ 392
Query: 409 VEFL 412
V+ L
Sbjct: 393 VKTL 396
>gi|218187227|gb|EEC69654.1| hypothetical protein OsI_39066 [Oryza sativa Indica Group]
Length = 469
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/64 (53%), Positives = 50/64 (78%), Gaps = 1/64 (1%)
Query: 351 ARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVE 410
A+R +A + H+L+ER RR++I+E+MK LQ+L+P CNK T KA MLDE I Y++SLQ Q++
Sbjct: 274 AKRRRAAEVHNLSERRRRDRINEKMKALQELIPHCNK-TDKASMLDEAIEYLKSLQLQLQ 332
Query: 411 FLSM 414
+ M
Sbjct: 333 MMWM 336
>gi|297596562|ref|NP_001042775.2| Os01g0286100 [Oryza sativa Japonica Group]
gi|215717101|dbj|BAG95464.1| unnamed protein product [Oryza sativa Japonica Group]
gi|255673123|dbj|BAF04689.2| Os01g0286100 [Oryza sativa Japonica Group]
Length = 637
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 49/63 (77%), Gaps = 1/63 (1%)
Query: 352 RRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEF 411
+R + + H+L+ER RR++I+E+M+ LQ+L+P CNK+ KA MLDE I Y+++LQ QV+
Sbjct: 381 KRSRTAEVHNLSERRRRDRINEKMRALQELIPNCNKID-KASMLDEAIEYLKTLQLQVQM 439
Query: 412 LSM 414
+SM
Sbjct: 440 MSM 442
>gi|334182257|ref|NP_001184895.1| transcription factor bHLH7 [Arabidopsis thaliana]
gi|4587574|gb|AAD25805.1|AC006550_13 Contains PF|00010 helix-loop-helix DNA-binding domain. ESTs
gb|T45640 and gb|T22783 come from this gene [Arabidopsis
thaliana]
gi|332189398|gb|AEE27519.1| transcription factor bHLH7 [Arabidopsis thaliana]
Length = 297
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/119 (45%), Positives = 78/119 (65%), Gaps = 18/119 (15%)
Query: 311 NEGKANGNGAVKAEDEG-----DDKQAKANNAKPP----EPPKDYIH------VRARRGQ 355
++GK G+G +K ++ G D + ++ KPP PP + VRARRGQ
Sbjct: 88 DQGK--GHGFLKPDETGKRFQDDVLDNRCSSMKPPMSQPAPPMPHQQSTIRPRVRARRGQ 145
Query: 356 ATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSM 414
ATD HS+AER+RRE+I+ER++ LQ+LVP NK T +A M+DEI++YV+ L+ QV+ LSM
Sbjct: 146 ATDPHSIAERLRRERIAERIRSLQELVPTVNK-TDRAAMIDEIVDYVKFLRLQVKVLSM 203
>gi|125606147|gb|EAZ45183.1| hypothetical protein OsJ_29826 [Oryza sativa Japonica Group]
Length = 379
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/64 (53%), Positives = 47/64 (73%)
Query: 349 VRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQ 408
+RA+RG AT S+AERVRR +ISER++ LQ+LVP K T A MLD ++Y++ LQ+Q
Sbjct: 297 IRAKRGCATHPRSIAERVRRTRISERIRKLQELVPNMEKQTNTADMLDLAVDYIKELQKQ 356
Query: 409 VEFL 412
V+ L
Sbjct: 357 VKVL 360
>gi|125562107|gb|EAZ07555.1| hypothetical protein OsI_29809 [Oryza sativa Indica Group]
Length = 403
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/64 (53%), Positives = 48/64 (75%)
Query: 349 VRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQ 408
+RA+RG AT S+AERVRR +ISER++ LQ+LVP +K T A MLD ++Y++ LQ+Q
Sbjct: 322 IRAKRGCATHPRSIAERVRRTRISERIRKLQELVPNMDKQTNTADMLDLAVDYIKDLQKQ 381
Query: 409 VEFL 412
V+ L
Sbjct: 382 VKGL 385
>gi|297809891|ref|XP_002872829.1| hypothetical protein ARALYDRAFT_490301 [Arabidopsis lyrata subsp.
lyrata]
gi|297318666|gb|EFH49088.1| hypothetical protein ARALYDRAFT_490301 [Arabidopsis lyrata subsp.
lyrata]
Length = 310
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 46/88 (52%), Positives = 63/88 (71%), Gaps = 2/88 (2%)
Query: 349 VRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQ 408
VRARRGQATD HS+AER+RRE+I+ER++ LQ+LVP NK T +A M+DEI++YV+ L+ Q
Sbjct: 146 VRARRGQATDPHSIAERLRRERIAERIRALQELVPTVNK-TDRAAMIDEIVDYVKFLRLQ 204
Query: 409 VEFLSM-KLASVNTRLELNVDALMSKDI 435
V+ LSM +L L D +S +
Sbjct: 205 VKVLSMSRLGGAGAVAPLVTDMPLSSSV 232
>gi|224120208|ref|XP_002330991.1| predicted protein [Populus trichocarpa]
gi|222872921|gb|EEF10052.1| predicted protein [Populus trichocarpa]
Length = 355
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 47/65 (72%)
Query: 349 VRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQ 408
+RA+RG AT S+AERVRR +ISERM+ LQ+LVP +K T A MLD + Y++ LQ+Q
Sbjct: 271 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVVYIKDLQKQ 330
Query: 409 VEFLS 413
+ LS
Sbjct: 331 YKTLS 335
>gi|225441696|ref|XP_002277274.1| PREDICTED: transcription factor bHLH130-like [Vitis vinifera]
Length = 405
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 46/65 (70%)
Query: 349 VRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQ 408
+RA+RG AT S+AERVRR +ISERM+ LQ+LVP +K T A MLD + Y++ LQ+Q
Sbjct: 321 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVEYIKDLQKQ 380
Query: 409 VEFLS 413
L+
Sbjct: 381 YNTLT 385
>gi|297606863|ref|NP_001059108.2| Os07g0193800 [Oryza sativa Japonica Group]
gi|255677582|dbj|BAF21022.2| Os07g0193800, partial [Oryza sativa Japonica Group]
Length = 112
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 39/65 (60%), Positives = 47/65 (72%), Gaps = 5/65 (7%)
Query: 306 KRCKPNEGKANGNGAVKAE---DEGDDKQAKANNAKPPEPPK-DYIHVRARRGQATDSHS 361
KR KP + ++ N +++ E D G+ +A NA PPEPPK DYIHVRARRGQATDSHS
Sbjct: 34 KRLKPMKS-SDKNDSLRTEAGTDSGNSSKAADKNATPPEPPKQDYIHVRARRGQATDSHS 92
Query: 362 LAERV 366
LAERV
Sbjct: 93 LAERV 97
>gi|242082273|ref|XP_002445905.1| hypothetical protein SORBIDRAFT_07g027810 [Sorghum bicolor]
gi|241942255|gb|EES15400.1| hypothetical protein SORBIDRAFT_07g027810 [Sorghum bicolor]
Length = 399
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 36/72 (50%), Positives = 51/72 (70%)
Query: 349 VRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQ 408
+RA+RG AT S+AERVRR KISER++ LQ+LVP +K T + MLD ++Y++ LQ+Q
Sbjct: 317 IRAKRGCATHPRSIAERVRRTKISERIRKLQELVPNMDKQTNTSDMLDLAVDYIKDLQKQ 376
Query: 409 VEFLSMKLASVN 420
V+ L+ AS
Sbjct: 377 VKALNESRASCT 388
>gi|414873163|tpg|DAA51720.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 523
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 33/63 (52%), Positives = 49/63 (77%), Gaps = 1/63 (1%)
Query: 352 RRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEF 411
RR +A + H+L+ER RR++I+E+M+ LQ+L+P CNK T KA +LDE I Y++SLQ QV+
Sbjct: 321 RRTRAAEVHNLSERRRRDRINEKMRALQELIPHCNK-TDKASILDETIEYLKSLQMQVQI 379
Query: 412 LSM 414
+ M
Sbjct: 380 MWM 382
>gi|414876673|tpg|DAA53804.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 310
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/133 (39%), Positives = 77/133 (57%), Gaps = 15/133 (11%)
Query: 367 RREKISERMKLL--QDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMKLASVNTRLE 424
R I ++M L+ ++ + +V G A+ML EIINYVQSLQRQVEF+SMKLA+VN +++
Sbjct: 161 RLLDIHDKMMLINNKETLDFSFQVVGNAVMLGEIINYVQSLQRQVEFMSMKLATVNPQVD 220
Query: 425 LN-VDALMSKDIYQPNKPLPHSIFQIDSS-ASAFFSHQPQQNPALHGNISNGTMTQCPVD 482
LN + ++ KD P PH F +++S AS + QP HG+ Q +
Sbjct: 221 LNSLPNVLPKDSCGP----PH--FSLETSGASLSYLSQPH-----HGSPLGCMDNQSCMH 269
Query: 483 PLDNALCRNLSMQ 495
PLD C +++Q
Sbjct: 270 PLDTTFCLAINLQ 282
>gi|115477188|ref|NP_001062190.1| Os08g0506700 [Oryza sativa Japonica Group]
gi|42408931|dbj|BAD10188.1| putative transcription factor RAU1 [Oryza sativa Japonica Group]
gi|113624159|dbj|BAF24104.1| Os08g0506700 [Oryza sativa Japonica Group]
gi|125603951|gb|EAZ43276.1| hypothetical protein OsJ_27873 [Oryza sativa Japonica Group]
gi|215712322|dbj|BAG94449.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 399
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 34/64 (53%), Positives = 48/64 (75%)
Query: 349 VRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQ 408
+RA+RG AT S+AERVRR +ISER++ LQ+LVP +K T A MLD ++Y++ LQ+Q
Sbjct: 318 IRAKRGCATHPRSIAERVRRTRISERIRKLQELVPNMDKQTNTADMLDLAVDYIKDLQKQ 377
Query: 409 VEFL 412
V+ L
Sbjct: 378 VKGL 381
>gi|147789805|emb|CAN62935.1| hypothetical protein VITISV_008845 [Vitis vinifera]
Length = 394
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 46/65 (70%)
Query: 349 VRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQ 408
+RA+RG AT S+AERVRR +ISERM+ LQ+LVP +K T A MLD + Y++ LQ+Q
Sbjct: 310 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVEYIKDLQKQ 369
Query: 409 VEFLS 413
L+
Sbjct: 370 YNTLT 374
>gi|218188008|gb|EEC70435.1| hypothetical protein OsI_01449 [Oryza sativa Indica Group]
Length = 693
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 49/63 (77%), Gaps = 1/63 (1%)
Query: 352 RRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEF 411
+R + + H+L+ER RR++I+E+M+ LQ+L+P CNK+ KA MLDE I Y+++LQ QV+
Sbjct: 437 KRSRTAEVHNLSERRRRDRINEKMRALQELIPNCNKID-KASMLDEAIEYLKTLQLQVQM 495
Query: 412 LSM 414
+SM
Sbjct: 496 MSM 498
>gi|255538250|ref|XP_002510190.1| conserved hypothetical protein [Ricinus communis]
gi|223550891|gb|EEF52377.1| conserved hypothetical protein [Ricinus communis]
Length = 312
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 41/103 (39%), Positives = 61/103 (59%), Gaps = 3/103 (2%)
Query: 315 ANGNGAVKAEDEGDDKQAKANNAKPPEPPKDYIHVR--ARRGQATDSHSLAERVRREKIS 372
A G D GD A+ E P + + R ++R +A + H+L+E+ RR +I+
Sbjct: 83 AERRGVSMENDLGDLSCDSEKGAEVAEVPSETVRPRNSSKRSRAAEVHNLSEKRRRSRIN 142
Query: 373 ERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMK 415
E+MK LQ+L+P NK T KA MLDE I Y++ LQ QV+ L+M+
Sbjct: 143 EKMKALQNLIPNSNK-TDKASMLDEAIEYLKQLQLQVQMLTMR 184
>gi|168012170|ref|XP_001758775.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162689912|gb|EDQ76281.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 95
Score = 72.4 bits (176), Expect = 6e-10, Method: Composition-based stats.
Identities = 40/64 (62%), Positives = 46/64 (71%)
Query: 350 RARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQV 409
RARRG AT S+AER RR +ISERMK LQDLVP +K T A MLDE + YV+ LQ QV
Sbjct: 16 RARRGYATHPRSIAERNRRSRISERMKKLQDLVPNMDKQTNTADMLDEAVEYVKHLQTQV 75
Query: 410 EFLS 413
+ LS
Sbjct: 76 KDLS 79
>gi|357128032|ref|XP_003565680.1| PREDICTED: LOW QUALITY PROTEIN: transcription factor PIF3-like
[Brachypodium distachyon]
Length = 614
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 49/63 (77%), Gaps = 1/63 (1%)
Query: 352 RRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEF 411
+R + + H+L+ER RR++I+E+M+ LQ+L+P CNK+ KA MLDE I Y+++LQ QV+
Sbjct: 402 KRSRTAEVHNLSERRRRDRINEKMRALQELIPNCNKID-KASMLDEAIEYLKTLQLQVQM 460
Query: 412 LSM 414
+SM
Sbjct: 461 MSM 463
>gi|326495514|dbj|BAJ85853.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 391
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 35/72 (48%), Positives = 50/72 (69%)
Query: 349 VRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQ 408
+RA+RG AT S+AERVRR +ISER++ LQ+LVP +K T A MLD ++Y++ LQ Q
Sbjct: 307 IRAKRGCATHPRSIAERVRRTRISERIRKLQELVPNMDKQTNTADMLDLAVDYIKELQEQ 366
Query: 409 VEFLSMKLASVN 420
V+ ++ AS
Sbjct: 367 VKVINESRASCT 378
>gi|224066527|ref|XP_002302124.1| predicted protein [Populus trichocarpa]
gi|222843850|gb|EEE81397.1| predicted protein [Populus trichocarpa]
Length = 233
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 33/63 (52%), Positives = 49/63 (77%), Gaps = 1/63 (1%)
Query: 352 RRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEF 411
RR +A + H+L+ER RR++I+E+M+ LQ+L+P CNK T KA MLDE I Y++SLQ Q++
Sbjct: 31 RRSRAAEVHNLSERRRRDRINEKMRALQELIPHCNK-TDKASMLDEAIEYLKSLQLQLQV 89
Query: 412 LSM 414
+ M
Sbjct: 90 MWM 92
>gi|168056250|ref|XP_001780134.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668446|gb|EDQ55053.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 81
Score = 72.4 bits (176), Expect = 6e-10, Method: Composition-based stats.
Identities = 39/80 (48%), Positives = 54/80 (67%)
Query: 347 IHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQ 406
+ RA+RG AT S+AERVRR +ISERMK LQDLVP K T + MLDE + YV+SLQ
Sbjct: 1 MRARAKRGCATHPRSIAERVRRTRISERMKKLQDLVPNMEKTTNTSDMLDETVEYVKSLQ 60
Query: 407 RQVEFLSMKLASVNTRLELN 426
+V+ L+ +A + +++
Sbjct: 61 MKVKELTETIAQLKAATQMS 80
>gi|222618221|gb|EEE54353.1| hypothetical protein OsJ_01348 [Oryza sativa Japonica Group]
Length = 705
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 49/63 (77%), Gaps = 1/63 (1%)
Query: 352 RRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEF 411
+R + + H+L+ER RR++I+E+M+ LQ+L+P CNK+ KA MLDE I Y+++LQ QV+
Sbjct: 449 KRSRTAEVHNLSERRRRDRINEKMRALQELIPNCNKID-KASMLDEAIEYLKTLQLQVQM 507
Query: 412 LSM 414
+SM
Sbjct: 508 MSM 510
>gi|242042934|ref|XP_002459338.1| hypothetical protein SORBIDRAFT_02g002760 [Sorghum bicolor]
gi|241922715|gb|EER95859.1| hypothetical protein SORBIDRAFT_02g002760 [Sorghum bicolor]
Length = 446
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 33/63 (52%), Positives = 49/63 (77%), Gaps = 1/63 (1%)
Query: 352 RRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEF 411
RR +A + H+++ER RR++I+E+M+ LQ+LVP CNK T KA +LDE I Y++SLQ QV+
Sbjct: 245 RRTRAAEVHNMSERRRRDRINEKMRALQELVPHCNK-TDKASILDEAIEYLKSLQMQVQI 303
Query: 412 LSM 414
+ M
Sbjct: 304 MWM 306
>gi|357148389|ref|XP_003574744.1| PREDICTED: transcription factor bHLH130-like [Brachypodium
distachyon]
Length = 377
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 47/64 (73%)
Query: 349 VRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQ 408
+RA+RG AT S+AERVRR +ISER++ LQ+LVP +K T A MLD ++Y++ LQ Q
Sbjct: 300 IRAKRGCATHPRSIAERVRRTRISERIRKLQELVPNMDKQTNTADMLDLAVDYIKELQEQ 359
Query: 409 VEFL 412
V+ +
Sbjct: 360 VKVI 363
>gi|186511471|ref|NP_001118919.1| transcription factor UNE12 [Arabidopsis thaliana]
gi|332656801|gb|AEE82201.1| transcription factor UNE12 [Arabidopsis thaliana]
Length = 247
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 46/88 (52%), Positives = 63/88 (71%), Gaps = 2/88 (2%)
Query: 349 VRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQ 408
VRARRGQATD HS+AER+RRE+I+ER++ LQ+LVP NK T +A M+DEI++YV+ L+ Q
Sbjct: 83 VRARRGQATDPHSIAERLRRERIAERIRALQELVPTVNK-TDRAAMIDEIVDYVKFLRLQ 141
Query: 409 VEFLSM-KLASVNTRLELNVDALMSKDI 435
V+ LSM +L L D +S +
Sbjct: 142 VKVLSMSRLGGAGAVAPLVTDMPLSSSV 169
>gi|224053374|ref|XP_002297788.1| predicted protein [Populus trichocarpa]
gi|222845046|gb|EEE82593.1| predicted protein [Populus trichocarpa]
Length = 111
Score = 72.0 bits (175), Expect = 7e-10, Method: Composition-based stats.
Identities = 37/64 (57%), Positives = 48/64 (75%)
Query: 350 RARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQV 409
RA+RG AT S+AERVRR +ISERM+ LQDLVP +K T + MLD ++Y++ LQRQV
Sbjct: 33 RAKRGCATHPRSIAERVRRTRISERMRKLQDLVPNMDKQTNTSDMLDLAVDYIKDLQRQV 92
Query: 410 EFLS 413
+ LS
Sbjct: 93 QTLS 96
>gi|168021524|ref|XP_001763291.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162685426|gb|EDQ71821.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 537
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 38/63 (60%), Positives = 42/63 (66%), Gaps = 1/63 (1%)
Query: 350 RARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQV 409
RARRG ATD S+ R RREKI+ER+K LQ LVP KV MLDE I+YVQ LQ QV
Sbjct: 443 RARRGSATDPQSVYARHRREKINERLKTLQHLVPNGAKV-DIVTMLDEAIHYVQFLQLQV 501
Query: 410 EFL 412
L
Sbjct: 502 TLL 504
>gi|449436269|ref|XP_004135915.1| PREDICTED: transcription factor bHLH130-like [Cucumis sativus]
gi|449521930|ref|XP_004167982.1| PREDICTED: transcription factor bHLH130-like [Cucumis sativus]
Length = 419
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 44/124 (35%), Positives = 70/124 (56%), Gaps = 16/124 (12%)
Query: 306 KRCKPNEGKANGNGAV---KAEDEGDDKQAKANNAKPP-----EPPKDYI--------HV 349
KR + N G+A V + D G++ + A++ P +P + ++ +
Sbjct: 283 KRGRDNNGRAFATSIVLETQNADSGNNIRGLAHHLSLPISFNKDPVEKFLRFQEPVPHQI 342
Query: 350 RARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQV 409
RA+RG AT S+AER+RR +ISER+K LQ+L P +K T A ML+ + Y++ LQRQV
Sbjct: 343 RAKRGCATHPRSIAERMRRTRISERIKKLQELFPDMDKQTSTADMLELAVEYIKGLQRQV 402
Query: 410 EFLS 413
+ L+
Sbjct: 403 KTLT 406
>gi|339716188|gb|AEJ88333.1| putative MYC protein [Tamarix hispida]
Length = 160
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 48/65 (73%)
Query: 348 HVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQR 407
VRA+RG AT S+AERVRR +IS+R++ LQ+LVP +K T A ML+E + YV+ LQ+
Sbjct: 83 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQELVPNMDKQTNTADMLEEAVEYVKGLQK 142
Query: 408 QVEFL 412
Q+E L
Sbjct: 143 QIEEL 147
>gi|19401700|gb|AAL87667.1| transcription factor RAU1 [Oryza sativa]
Length = 150
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 34/64 (53%), Positives = 48/64 (75%)
Query: 349 VRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQ 408
+RA+RG AT S+AERVRR +ISER++ LQ+LVP +K T A MLD ++Y++ LQ+Q
Sbjct: 69 IRAKRGCATHPRSIAERVRRTRISERIRKLQELVPNMDKQTNTADMLDLAVDYIKDLQKQ 128
Query: 409 VEFL 412
V+ L
Sbjct: 129 VKGL 132
>gi|222080621|gb|ACM41587.1| bHLH transcription factor MYC4 [Catharanthus roseus]
Length = 259
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 34/66 (51%), Positives = 49/66 (74%)
Query: 348 HVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQR 407
VRA+RG AT S+AERVRR +IS+R++ LQ+LVP +K T A ML+E + YV+ LQ+
Sbjct: 182 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQELVPNMDKQTNTADMLEEAVEYVKFLQK 241
Query: 408 QVEFLS 413
Q++ L+
Sbjct: 242 QIQELT 247
>gi|297739719|emb|CBI29901.3| unnamed protein product [Vitis vinifera]
Length = 280
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 46/65 (70%)
Query: 349 VRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQ 408
+RA+RG AT S+AERVRR +ISERM+ LQ+LVP +K T A MLD + Y++ LQ+Q
Sbjct: 196 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVEYIKDLQKQ 255
Query: 409 VEFLS 413
L+
Sbjct: 256 YNTLT 260
>gi|297736219|emb|CBI24857.3| unnamed protein product [Vitis vinifera]
Length = 246
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 34/64 (53%), Positives = 46/64 (71%)
Query: 349 VRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQ 408
+RA+RG AT S+AERVRR +ISERM+ LQ+L P +K T A MLD + Y++ LQ+Q
Sbjct: 171 IRAKRGCATHPRSIAERVRRTRISERMRKLQELFPNMDKQTNTADMLDLAVEYIKDLQKQ 230
Query: 409 VEFL 412
V+ L
Sbjct: 231 VKTL 234
>gi|414590534|tpg|DAA41105.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 391
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/62 (53%), Positives = 47/62 (75%)
Query: 349 VRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQ 408
+RA+RG AT S+AERVRR KISER++ LQ+LVP +K T + MLD ++Y++ LQ+Q
Sbjct: 288 IRAKRGCATHPRSIAERVRRTKISERIRKLQELVPNMDKQTNTSDMLDLAVDYIKELQKQ 347
Query: 409 VE 410
V+
Sbjct: 348 VK 349
>gi|212720610|ref|NP_001131794.1| uncharacterized protein LOC100193167 [Zea mays]
gi|194692562|gb|ACF80365.1| unknown [Zea mays]
gi|413953032|gb|AFW85681.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 312
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/105 (40%), Positives = 60/105 (57%), Gaps = 5/105 (4%)
Query: 315 ANGNGAVKAEDEGDDKQAKANNAKPPEPPK----DYIHVRARRGQATDSHSLAERVRREK 370
+G ED G + A ++P PP+ +R +A + H+L+E+ RR K
Sbjct: 61 GHGQQVDYGEDAGGLGDSDAGGSEPEPPPERTRGGSGGGGGKRSRAAEVHNLSEKRRRSK 120
Query: 371 ISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMK 415
I+E+MK LQ L+P NK T KA MLDE I Y++ LQ QV+ LSM+
Sbjct: 121 INEKMKALQSLIPNSNK-TDKASMLDEAIEYLKQLQLQVQMLSMR 164
>gi|23495742|dbj|BAC19953.1| transcription factor BHLH9-like protein [Oryza sativa Japonica
Group]
gi|24059945|dbj|BAC21408.1| transcription factor BHLH9-like protein [Oryza sativa Japonica
Group]
Length = 417
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/68 (50%), Positives = 50/68 (73%), Gaps = 1/68 (1%)
Query: 352 RRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEF 411
RR +A + H+L+ER RR++I+E+++ LQ+LVP CNK T KA +LDE I Y++SLQ QV+
Sbjct: 225 RRTRAAEVHNLSERRRRDRINEKLRALQELVPHCNK-TDKASILDEAIEYLKSLQMQVQI 283
Query: 412 LSMKLASV 419
+ M V
Sbjct: 284 MWMTTGIV 291
>gi|414877117|tpg|DAA54248.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 567
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 49/63 (77%), Gaps = 1/63 (1%)
Query: 352 RRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEF 411
+R + + H+L+ER RR++I+E+M+ LQ+L+P CNK+ KA MLDE I Y+++LQ QV+
Sbjct: 349 KRSRTAEVHNLSERRRRDRINEKMRALQELIPNCNKID-KASMLDEAIEYLKTLQLQVQM 407
Query: 412 LSM 414
++M
Sbjct: 408 MAM 410
>gi|15219606|ref|NP_174776.1| transcription factor bHLH80 [Arabidopsis thaliana]
gi|75308885|sp|Q9C8P8.1|BH080_ARATH RecName: Full=Transcription factor bHLH80; AltName: Full=Basic
helix-loop-helix protein 80; Short=AtbHLH80; Short=bHLH
80; AltName: Full=Transcription factor EN 71; AltName:
Full=bHLH transcription factor bHLH080
gi|12324283|gb|AAG52112.1|AC023064_5 helix-loop-helix protein 1A, putative; 28707-26892 [Arabidopsis
thaliana]
gi|15724178|gb|AAL06481.1|AF411791_1 At1g35460/F12A4_2 [Arabidopsis thaliana]
gi|20127088|gb|AAM10958.1|AF488612_1 putative bHLH transcription factor [Arabidopsis thaliana]
gi|20147401|gb|AAM10410.1| At1g35460/F12A4_2 [Arabidopsis thaliana]
gi|332193674|gb|AEE31795.1| transcription factor bHLH80 [Arabidopsis thaliana]
Length = 259
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 49/65 (75%)
Query: 349 VRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQ 408
VRA+RG AT S+AERVRR +IS+R++ LQ+LVP +K T A ML+E + YV++LQ Q
Sbjct: 181 VRAKRGCATHPRSIAERVRRTRISDRIRRLQELVPNMDKQTNTADMLEEAVEYVKALQSQ 240
Query: 409 VEFLS 413
++ L+
Sbjct: 241 IQELT 245
>gi|357159056|ref|XP_003578325.1| PREDICTED: transcription factor bHLH130-like [Brachypodium
distachyon]
Length = 409
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 46/64 (71%)
Query: 349 VRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQ 408
+RA+RG AT S+AERVRR KISER++ LQ+LVP K T + MLD ++Y++ LQ Q
Sbjct: 327 IRAKRGCATHPRSIAERVRRTKISERIRKLQELVPNMEKQTNTSDMLDLAVDYIKELQMQ 386
Query: 409 VEFL 412
V+ +
Sbjct: 387 VKVM 390
>gi|449515097|ref|XP_004164586.1| PREDICTED: transcription factor bHLH84-like [Cucumis sativus]
Length = 327
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/117 (37%), Positives = 64/117 (54%), Gaps = 5/117 (4%)
Query: 297 ANASESSKNKRCKPNEGKANGNGAVKAEDEGDDKQAKANNAKPPEPPKDYIHVRARRGQA 356
N+ + S +R K E + NG + D ++ +N PK RA RG A
Sbjct: 189 GNSKKVSSTRRRKCEEEQENGRSSCDMNSCSSDNSSEDDNNNASPKPK----TRATRGSA 244
Query: 357 TDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLS 413
TD SL R RRE+I+ER+++LQ LVP KV + ML+E ++YV+ LQ Q++ LS
Sbjct: 245 TDPQSLYARKRRERINERLRILQKLVPNGTKV-DISTMLEEAVHYVKFLQLQIKLLS 300
>gi|339716186|gb|AEJ88332.1| putative MYC protein, partial [Tamarix hispida]
Length = 181
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/44 (72%), Positives = 34/44 (77%)
Query: 327 GDDKQAKANNAKPPEPPKDYIHVRARRGQATDSHSLAERVRREK 370
G K+ N PP+P KDYIHVRARRGQATDSHSLAER RREK
Sbjct: 138 GTGKETMQNTKSPPDPSKDYIHVRARRGQATDSHSLAERARREK 181
>gi|124360931|gb|ABN08903.1| Helix-loop-helix DNA-binding [Medicago truncatula]
Length = 484
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/68 (50%), Positives = 51/68 (75%), Gaps = 1/68 (1%)
Query: 352 RRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEF 411
+R +A + H+L+ER RR++I+E+MK LQ+L+P NK + KA MLDE I+Y++SLQ QV+
Sbjct: 255 KRSRAAEVHNLSERRRRDRINEKMKALQELIPRSNK-SDKASMLDEAIDYLKSLQLQVQM 313
Query: 412 LSMKLASV 419
+SM V
Sbjct: 314 MSMGCGMV 321
>gi|449447291|ref|XP_004141402.1| PREDICTED: transcription factor bHLH84-like [Cucumis sativus]
Length = 327
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/117 (37%), Positives = 64/117 (54%), Gaps = 5/117 (4%)
Query: 297 ANASESSKNKRCKPNEGKANGNGAVKAEDEGDDKQAKANNAKPPEPPKDYIHVRARRGQA 356
N+ + S +R K E + NG + D ++ +N PK RA RG A
Sbjct: 189 GNSKKVSSTRRRKCEEEQENGRSSCDMNSCSSDNSSEDDNNNASPKPK----TRATRGSA 244
Query: 357 TDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLS 413
TD SL R RRE+I+ER+++LQ LVP KV + ML+E ++YV+ LQ Q++ LS
Sbjct: 245 TDPQSLYARKRRERINERLRILQKLVPNGTKV-DISTMLEEAVHYVKFLQLQIKLLS 300
>gi|18379045|ref|NP_563672.1| transcription factor bHLH7 [Arabidopsis thaliana]
gi|75305862|sp|Q93Y00.1|BH007_ARATH RecName: Full=Transcription factor bHLH7; AltName: Full=Basic
helix-loop-helix protein 7; Short=AtbHLH7; Short=bHLH 7;
AltName: Full=Transcription factor EN 92; AltName:
Full=bHLH transcription factor bHLH007
gi|21735477|gb|AAL55714.2|AF251692_1 putative transcription factor BHLH7 [Arabidopsis thaliana]
gi|15450779|gb|AAK96661.1| Unknown protein [Arabidopsis thaliana]
gi|21387097|gb|AAM47952.1| unknown protein [Arabidopsis thaliana]
gi|332189397|gb|AEE27518.1| transcription factor bHLH7 [Arabidopsis thaliana]
Length = 302
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/66 (63%), Positives = 56/66 (84%), Gaps = 1/66 (1%)
Query: 349 VRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQ 408
VRARRGQATD HS+AER+RRE+I+ER++ LQ+LVP NK T +A M+DEI++YV+ L+ Q
Sbjct: 144 VRARRGQATDPHSIAERLRRERIAERIRSLQELVPTVNK-TDRAAMIDEIVDYVKFLRLQ 202
Query: 409 VEFLSM 414
V+ LSM
Sbjct: 203 VKVLSM 208
>gi|297606720|ref|NP_001058876.2| Os07g0143200 [Oryza sativa Japonica Group]
gi|255677508|dbj|BAF20790.2| Os07g0143200 [Oryza sativa Japonica Group]
Length = 447
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/68 (50%), Positives = 50/68 (73%), Gaps = 1/68 (1%)
Query: 352 RRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEF 411
RR +A + H+L+ER RR++I+E+++ LQ+LVP CNK T KA +LDE I Y++SLQ QV+
Sbjct: 226 RRTRAAEVHNLSERRRRDRINEKLRALQELVPHCNK-TDKASILDEAIEYLKSLQMQVQI 284
Query: 412 LSMKLASV 419
+ M V
Sbjct: 285 MWMTTGIV 292
>gi|359744468|gb|AEV57494.1| rice phytochrome-interacting factor 4 [Oryza sativa Japonica Group]
Length = 414
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/68 (50%), Positives = 50/68 (73%), Gaps = 1/68 (1%)
Query: 352 RRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEF 411
RR +A + H+L+ER RR++I+E+++ LQ+LVP CNK T KA +LDE I Y++SLQ QV+
Sbjct: 222 RRTRAAEVHNLSERRRRDRINEKLRALQELVPHCNK-TDKASILDEAIEYLKSLQMQVQI 280
Query: 412 LSMKLASV 419
+ M V
Sbjct: 281 MWMTTGIV 288
>gi|224082612|ref|XP_002306764.1| predicted protein [Populus trichocarpa]
gi|222856213|gb|EEE93760.1| predicted protein [Populus trichocarpa]
Length = 380
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/138 (37%), Positives = 72/138 (52%), Gaps = 24/138 (17%)
Query: 352 RRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEF 411
RR +A + H+L+ER RR++I+E+M+ LQ+L+P C K T KA MLDE I Y++SLQ Q++
Sbjct: 183 RRSRAAEVHNLSERRRRDRINEKMRALQELIPHCYK-TDKASMLDEAIEYLKSLQLQLQV 241
Query: 412 LSMKLASVNTRLELNVDALMSKDIYQPNKPLPH--------SIFQIDSSASAFFSHQPQQ 463
+ M + L V MS+ P PLP + ID S S P Q
Sbjct: 242 MWMG-GGMAPMLFPGVQHFMSRMGMGP--PLPSMQNPMHLPRVQLIDQS----ISMAPTQ 294
Query: 464 NPALHGNISNGTMTQCPV 481
N +G M Q PV
Sbjct: 295 N--------SGVMCQAPV 304
>gi|449447621|ref|XP_004141566.1| PREDICTED: transcription factor bHLH80-like [Cucumis sativus]
gi|449522500|ref|XP_004168264.1| PREDICTED: transcription factor bHLH80-like [Cucumis sativus]
Length = 244
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/66 (50%), Positives = 49/66 (74%)
Query: 348 HVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQR 407
VRA+RG AT S+AERVRR +IS+R++ LQ++VP +K T A ML+E + YV+ LQ+
Sbjct: 167 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQEVVPNMDKQTNTADMLEEAVEYVKFLQK 226
Query: 408 QVEFLS 413
Q++ L+
Sbjct: 227 QIQELT 232
>gi|226491584|ref|NP_001147257.1| protein SPATULA [Zea mays]
gi|195609152|gb|ACG26406.1| protein SPATULA [Zea mays]
Length = 185
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 49/64 (76%), Gaps = 1/64 (1%)
Query: 351 ARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVE 410
ARR ++ + H+ +ER RR+KI+E++K LQ+L+P CNK T K MLDE I+Y++SLQ Q++
Sbjct: 14 ARRSRSAEFHNFSERRRRDKINEKLKALQELLPNCNK-TDKVSMLDEAIDYLKSLQLQLQ 72
Query: 411 FLSM 414
L M
Sbjct: 73 MLVM 76
>gi|326503832|dbj|BAK02702.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 407
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 46/64 (71%)
Query: 349 VRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQ 408
+RA+RG AT S+AERVRR KISER++ LQ+LVP K T + MLD ++Y++ LQ Q
Sbjct: 324 IRAKRGCATHPRSIAERVRRTKISERIRKLQELVPNMEKQTNTSDMLDLAVDYIKELQMQ 383
Query: 409 VEFL 412
V+ +
Sbjct: 384 VKVM 387
>gi|414877115|tpg|DAA54246.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 377
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 49/63 (77%), Gaps = 1/63 (1%)
Query: 352 RRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEF 411
+R + + H+L+ER RR++I+E+M+ LQ+L+P CNK+ KA MLDE I Y+++LQ QV+
Sbjct: 159 KRSRTAEVHNLSERRRRDRINEKMRALQELIPNCNKI-DKASMLDEAIEYLKTLQLQVQM 217
Query: 412 LSM 414
++M
Sbjct: 218 MAM 220
>gi|297846606|ref|XP_002891184.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297337026|gb|EFH67443.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 256
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 49/65 (75%)
Query: 349 VRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQ 408
VRA+RG AT S+AERVRR +IS+R++ LQ+LVP +K T A ML+E + YV++LQ Q
Sbjct: 178 VRAKRGCATHPRSIAERVRRTRISDRIRRLQELVPNMDKQTNTADMLEEAVEYVKALQGQ 237
Query: 409 VEFLS 413
++ L+
Sbjct: 238 IQELT 242
>gi|222636419|gb|EEE66551.1| hypothetical protein OsJ_23063 [Oryza sativa Japonica Group]
Length = 517
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/68 (50%), Positives = 50/68 (73%), Gaps = 1/68 (1%)
Query: 352 RRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEF 411
RR +A + H+L+ER RR++I+E+++ LQ+LVP CNK T KA +LDE I Y++SLQ QV+
Sbjct: 325 RRTRAAEVHNLSERRRRDRINEKLRALQELVPHCNK-TDKASILDEAIEYLKSLQMQVQI 383
Query: 412 LSMKLASV 419
+ M V
Sbjct: 384 MWMTTGIV 391
>gi|297836114|ref|XP_002885939.1| basic helix-loop-helix protein [Arabidopsis lyrata subsp. lyrata]
gi|297331779|gb|EFH62198.1| basic helix-loop-helix protein [Arabidopsis lyrata subsp. lyrata]
Length = 328
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/158 (34%), Positives = 80/158 (50%), Gaps = 25/158 (15%)
Query: 265 DFNSRKRKAVSKGKGKETAASPSVNNTTKVAEANASESSKNKR----CKP-----NEGKA 315
D N R KA KG E + + + E +E + KR KP ++ ++
Sbjct: 159 DKNKRANKARRSQKGIEMSG-----DNENIGEEEYTEKAVGKRKTKPLKPQKTCCSDDES 213
Query: 316 NGNGAVKAEDEGDDKQAKANNAKPPEPPKDYIHVRARRGQATDSHSLAERVRREKISERM 375
NG ++++G+D +A N K RA RG ATD SL R RRE+I+ER+
Sbjct: 214 NGGDTFLSKEDGEDSKALNLNGK----------TRASRGAATDPQSLYARKRRERINERL 263
Query: 376 KLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLS 413
++LQ LVP KV + ML+E + YV+ LQ Q++ LS
Sbjct: 264 RILQHLVPNGTKVH-ISTMLEEAVQYVKFLQLQIKLLS 300
>gi|297803176|ref|XP_002869472.1| hypothetical protein ARALYDRAFT_913634 [Arabidopsis lyrata subsp.
lyrata]
gi|297315308|gb|EFH45731.1| hypothetical protein ARALYDRAFT_913634 [Arabidopsis lyrata subsp.
lyrata]
Length = 1780
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 76/162 (46%), Gaps = 20/162 (12%)
Query: 262 VPNDFNSRKRKAVSKGKGKETAASPSVNNTTKVAEANASESSKNKRCKPNEGKANGNGAV 321
+P + R V G + T A P K + + +S + CK
Sbjct: 1048 IPVTHGTESRATVIGGVSR-TFAVPGFGRRGKAVAIDTAGTSSSGVCKAETEPVRIQPET 1106
Query: 322 KAEDEGDDKQAKANNAKPPEPPKDYIHVRA----------RRGQATDSHSLAERVRREKI 371
+ E D KQ + + + ++ +R +A + H+LAER RREKI
Sbjct: 1107 ETEIAEDRKQKERE--------ETIVEIQGTEEARGSTSRKRSRAAEMHNLAERRRREKI 1158
Query: 372 SERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLS 413
+E+MK LQ+L+P CNK T K L+++I Y++SLQ Q++ +S
Sbjct: 1159 NEKMKTLQELIPRCNKST-KVSTLEDVIEYMKSLQMQIQMMS 1199
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 55/82 (67%), Gaps = 2/82 (2%)
Query: 352 RRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEF 411
+R +A + H+LAER RREKI+E+MK LQ+L+P CNK T K L+++I YV+SL+ Q++
Sbjct: 1569 KRSRAAEMHNLAERRRREKINEKMKTLQELIPRCNKST-KVSTLEDVIEYVKSLEMQIQH 1627
Query: 412 LSMKLASVNTRLELNVDALMSK 433
M + T + ++ L+ K
Sbjct: 1628 YVMNF-RIMTEVLISESMLLCK 1648
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 33/63 (52%), Positives = 45/63 (71%), Gaps = 1/63 (1%)
Query: 352 RRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEF 411
+R +A + H+LAER RREKI+E+MK LQ+L+P CNK T K LD I YV+ LQ Q++
Sbjct: 135 KRSRAAEMHNLAERRRREKINEKMKTLQELIPRCNKST-KVSTLDAAIEYVKWLQSQIQM 193
Query: 412 LSM 414
+ M
Sbjct: 194 ILM 196
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 70/139 (50%), Gaps = 15/139 (10%)
Query: 275 SKGKGKETAASPSVNNTTKVAEANASESSKNKRCKPNEGKANGNGAVKAEDEGDDKQAKA 334
++ + +T A P + K +E+ + CK A E +G + +A+
Sbjct: 518 TESRVSQTLAVPGLGQKGKAVVIETAETPSSGVCKAETEPVQIQPATIVEIQGTE-EARG 576
Query: 335 NNAKPPEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALM 394
+ ++ +R + + H+LAER RREKI+E +K LQ+L+P CNK T K
Sbjct: 577 SMSR-------------KRSRTAEMHNLAERRRREKINENIKTLQELIPRCNKST-KVST 622
Query: 395 LDEIINYVQSLQRQVEFLS 413
LD+ I YV+ LQ Q++ +S
Sbjct: 623 LDDAIEYVKWLQSQIQMMS 641
>gi|218199079|gb|EEC81506.1| hypothetical protein OsI_24867 [Oryza sativa Indica Group]
Length = 593
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/68 (50%), Positives = 50/68 (73%), Gaps = 1/68 (1%)
Query: 352 RRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEF 411
RR +A + H+L+ER RR++I+E+++ LQ+LVP CNK T KA +LDE I Y++SLQ QV+
Sbjct: 401 RRTRAAEVHNLSERRRRDRINEKLRALQELVPHCNK-TDKASILDEAIEYLKSLQMQVQI 459
Query: 412 LSMKLASV 419
+ M V
Sbjct: 460 MWMTTGIV 467
>gi|388503832|gb|AFK39982.1| unknown [Medicago truncatula]
Length = 406
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 45/65 (69%)
Query: 349 VRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQ 408
+RA+RG AT S+AERVRR +IS+R+K LQ L P +K T A MLD + Y++ LQ Q
Sbjct: 322 IRAKRGFATHPRSIAERVRRTRISDRIKKLQGLFPKSDKQTSTADMLDLAVEYIKDLQEQ 381
Query: 409 VEFLS 413
V+ L+
Sbjct: 382 VQILT 386
>gi|357457619|ref|XP_003599090.1| DNA binding protein [Medicago truncatula]
gi|355488138|gb|AES69341.1| DNA binding protein [Medicago truncatula]
Length = 403
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 45/65 (69%)
Query: 349 VRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQ 408
+RA+RG AT S+AERVRR +IS+R+K LQ L P +K T A MLD + Y++ LQ Q
Sbjct: 319 IRAKRGFATHPRSIAERVRRTRISDRIKKLQGLFPKSDKQTSTADMLDLAVEYIKDLQEQ 378
Query: 409 VEFLS 413
V+ L+
Sbjct: 379 VQILT 383
>gi|378924999|dbj|BAL63287.1| basic helix-loop-helix protein APG [Oryza sativa Japonica Group]
Length = 432
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 50/64 (78%), Gaps = 1/64 (1%)
Query: 351 ARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVE 410
++R + + H+L+ER RR++I+E+M+ LQ+L+P CNK+ KA ML+E I Y+++LQ QV+
Sbjct: 331 SKRSRTAEVHNLSERRRRDRINEKMRALQELIPNCNKI-DKASMLEEAIEYLKTLQLQVQ 389
Query: 411 FLSM 414
+SM
Sbjct: 390 MMSM 393
>gi|115461987|ref|NP_001054593.1| Os05g0139100 [Oryza sativa Japonica Group]
gi|50511445|gb|AAT77368.1| hypothetical protein [Oryza sativa Japonica Group]
gi|51854388|gb|AAU10768.1| hypothetical protein [Oryza sativa Japonica Group]
gi|113578144|dbj|BAF16507.1| Os05g0139100 [Oryza sativa Japonica Group]
Length = 505
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 49/63 (77%), Gaps = 1/63 (1%)
Query: 352 RRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEF 411
+R + + H+L+ER RR++I+E+M+ LQ+L+P CNK+ KA ML+E I Y+++LQ QV+
Sbjct: 332 KRSRTAEVHNLSERRRRDRINEKMRALQELIPNCNKI-DKASMLEEAIEYLKTLQLQVQM 390
Query: 412 LSM 414
+SM
Sbjct: 391 MSM 393
>gi|224106043|ref|XP_002314023.1| predicted protein [Populus trichocarpa]
gi|222850431|gb|EEE87978.1| predicted protein [Populus trichocarpa]
Length = 421
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 47/65 (72%)
Query: 349 VRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQ 408
+RA+RG AT S+AERVRR +ISERM+ LQ+L P +K T A MLD + +++ LQ+Q
Sbjct: 337 IRAKRGFATHPRSIAERVRRTRISERMRKLQELFPNMDKQTNTADMLDLAVEHIKDLQKQ 396
Query: 409 VEFLS 413
V+ L+
Sbjct: 397 VKTLT 401
>gi|449439645|ref|XP_004137596.1| PREDICTED: transcription factor UNE10-like [Cucumis sativus]
gi|449487081|ref|XP_004157490.1| PREDICTED: transcription factor UNE10-like [Cucumis sativus]
Length = 458
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 49/65 (75%), Gaps = 1/65 (1%)
Query: 351 ARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVE 410
ARR +A H+ +ER RR++I+E+MK LQ LVP +K T KA MLDE+I Y++ LQ QV+
Sbjct: 257 ARRSRAAAIHNQSERRRRDRINEKMKALQKLVPNASK-TDKASMLDEVIEYLKQLQAQVQ 315
Query: 411 FLSMK 415
F+S++
Sbjct: 316 FMSVR 320
>gi|145334165|ref|NP_001078463.1| transcription factor bHLH127 [Arabidopsis thaliana]
gi|75296238|sp|Q7XHI7.1|BH127_ARATH RecName: Full=Transcription factor bHLH127; AltName: Full=Basic
helix-loop-helix protein 127; Short=AtbHLH127;
Short=bHLH 127; AltName: Full=bHLH transcription factor
bHLH127
gi|33111973|emb|CAE12173.1| putative bHLH127 transcription factor [Arabidopsis thaliana]
gi|332660148|gb|AEE85548.1| transcription factor bHLH127 [Arabidopsis thaliana]
Length = 307
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/58 (56%), Positives = 45/58 (77%), Gaps = 1/58 (1%)
Query: 352 RRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQV 409
+R +A + H+LAER RREKI+ERMK LQ L+P CNK T K ML+++I YV+SL+ Q+
Sbjct: 147 KRSRAAEMHNLAERRRREKINERMKTLQQLIPRCNKST-KVSMLEDVIEYVKSLEMQI 203
>gi|297605234|ref|NP_001056902.2| Os06g0164400 [Oryza sativa Japonica Group]
gi|255676746|dbj|BAF18816.2| Os06g0164400, partial [Oryza sativa Japonica Group]
Length = 188
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 48/65 (73%), Gaps = 1/65 (1%)
Query: 351 ARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVE 410
++R +A + H+L+E+ RR KI+E+MK LQ L+P NK T KA MLDE I Y++ LQ QV+
Sbjct: 22 SKRSRAAEVHNLSEKRRRSKINEKMKALQSLIPNSNK-TDKASMLDEAIEYLKQLQLQVQ 80
Query: 411 FLSMK 415
LSM+
Sbjct: 81 MLSMR 85
>gi|168027850|ref|XP_001766442.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162682351|gb|EDQ68770.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 879
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/63 (52%), Positives = 45/63 (71%), Gaps = 1/63 (1%)
Query: 350 RARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQV 409
RAR+G A D S+A RVRRE+ISER+K+LQ L+P +KV ML++ I YVQ L+ Q+
Sbjct: 755 RARQGSANDPQSIAARVRRERISERLKVLQALIPNGDKVD-MVTMLEKAITYVQCLELQI 813
Query: 410 EFL 412
+ L
Sbjct: 814 KML 816
>gi|356571031|ref|XP_003553685.1| PREDICTED: uncharacterized protein LOC100784724 [Glycine max]
Length = 518
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/103 (38%), Positives = 64/103 (62%), Gaps = 4/103 (3%)
Query: 319 GAVKAEDEGDDKQAKANNAKPPEPPK-DYIHVRARRGQATDSHSLAERVRREKISERMKL 377
G K ED D N+ +P + K D R +R + + H+L+E+ RREKI+++M+
Sbjct: 299 GFRKHEDTDDSTYLSDNDGEPEDMVKQDREGNRVKRSRNPEVHNLSEKKRREKINKKMRT 358
Query: 378 LQDLVPGCNKVTGKALMLDEIINYVQSLQRQVE--FLSMKLAS 418
L+DL+P CNKV KA MLD+ I+Y+++L+ Q++ F M + S
Sbjct: 359 LKDLIPNCNKV-DKASMLDDAIDYLKTLKLQLQANFQIMSMGS 400
>gi|356542383|ref|XP_003539646.1| PREDICTED: transcription factor bHLH130-like [Glycine max]
Length = 434
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 44/64 (68%)
Query: 349 VRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQ 408
+RA+RG AT S+AER RR +IS R+K LQDL P +K T A MLD + Y++ LQ+Q
Sbjct: 356 IRAKRGFATHPRSIAERERRTRISARIKKLQDLFPKTDKQTSTADMLDLAVEYIKDLQKQ 415
Query: 409 VEFL 412
V+ L
Sbjct: 416 VKML 419
>gi|226510391|ref|NP_001150862.1| LOC100284495 [Zea mays]
gi|195642440|gb|ACG40688.1| helix-loop-helix DNA-binding domain containing protein [Zea mays]
Length = 359
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/64 (54%), Positives = 46/64 (71%)
Query: 349 VRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQ 408
VRARRG AT S+AER RR +IS+R+K LQDLVP +K T + MLD ++Y++ L+ Q
Sbjct: 280 VRARRGCATHPRSIAERERRTRISKRLKKLQDLVPNMDKQTNTSDMLDLAVDYIKELKDQ 339
Query: 409 VEFL 412
VE L
Sbjct: 340 VEKL 343
>gi|255563356|ref|XP_002522681.1| hypothetical protein RCOM_0886600 [Ricinus communis]
gi|223538157|gb|EEF39768.1| hypothetical protein RCOM_0886600 [Ricinus communis]
Length = 77
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/45 (71%), Positives = 40/45 (88%)
Query: 394 MLDEIINYVQSLQRQVEFLSMKLASVNTRLELNVDALMSKDIYQP 438
MLDEIINYVQSLQRQVEFLSMKLA+VN RL+ N++ L++K+ + P
Sbjct: 1 MLDEIINYVQSLQRQVEFLSMKLAAVNPRLDFNINNLIAKETFPP 45
>gi|242086827|ref|XP_002439246.1| hypothetical protein SORBIDRAFT_09g003090 [Sorghum bicolor]
gi|241944531|gb|EES17676.1| hypothetical protein SORBIDRAFT_09g003090 [Sorghum bicolor]
Length = 480
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 50/64 (78%), Gaps = 1/64 (1%)
Query: 351 ARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVE 410
A+R + + H+++ER RR++I+E+M+ LQ+L+P CNK+ KA ML+E I Y+++LQ QV+
Sbjct: 257 AKRSRTAEVHNMSERRRRDRINEKMRALQELIPNCNKI-DKASMLEEAIEYLKTLQLQVQ 315
Query: 411 FLSM 414
+SM
Sbjct: 316 MMSM 319
>gi|356548947|ref|XP_003542860.1| PREDICTED: transcription factor bHLH130-like [Glycine max]
Length = 438
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 44/64 (68%)
Query: 349 VRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQ 408
+RA+RG AT S+AER RR +IS R+K LQDL P +K T A MLD + Y++ LQ+Q
Sbjct: 360 IRAKRGFATHPRSIAERERRTRISARIKKLQDLFPKSDKQTSTADMLDLAVEYIKDLQKQ 419
Query: 409 VEFL 412
V+ L
Sbjct: 420 VKIL 423
>gi|326500148|dbj|BAJ90909.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 493
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 49/62 (79%), Gaps = 1/62 (1%)
Query: 352 RRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEF 411
+RG+ + H+++ER RR++I+E+M+ LQ+L+P CNK+ KA ML+E I Y+++LQ QV+
Sbjct: 321 KRGRTAEVHNMSERRRRDRINEKMRALQELIPNCNKID-KASMLEEAIEYLKTLQLQVQM 379
Query: 412 LS 413
+S
Sbjct: 380 MS 381
>gi|356557136|ref|XP_003546874.1| PREDICTED: transcription factor bHLH128-like [Glycine max]
Length = 445
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/69 (50%), Positives = 47/69 (68%)
Query: 349 VRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQ 408
+RA+RG AT S+AER RR +ISER+K LQDL P K T A MLD + +++ LQ+Q
Sbjct: 361 IRAKRGFATHPRSIAERERRTRISERIKKLQDLFPRSEKPTSTADMLDLAVEHIKDLQQQ 420
Query: 409 VEFLSMKLA 417
V+ LS + A
Sbjct: 421 VQILSDRKA 429
>gi|326523485|dbj|BAJ92913.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 493
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 49/62 (79%), Gaps = 1/62 (1%)
Query: 352 RRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEF 411
+RG+ + H+++ER RR++I+E+M+ LQ+L+P CNK+ KA ML+E I Y+++LQ QV+
Sbjct: 321 KRGRTAEVHNMSERRRRDRINEKMRALQELIPNCNKID-KASMLEEAIEYLKTLQLQVQM 379
Query: 412 LS 413
+S
Sbjct: 380 MS 381
>gi|242084158|ref|XP_002442504.1| hypothetical protein SORBIDRAFT_08g021000 [Sorghum bicolor]
gi|241943197|gb|EES16342.1| hypothetical protein SORBIDRAFT_08g021000 [Sorghum bicolor]
Length = 531
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/60 (55%), Positives = 48/60 (80%), Gaps = 1/60 (1%)
Query: 351 ARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVE 410
A+R +A + H+L+ER RR++I+E+MK LQ+L+P CNK T KA MLDE I Y++SLQ Q++
Sbjct: 310 AKRRRAAEVHNLSERRRRDRINEKMKALQELIPHCNK-TDKASMLDEAIEYLKSLQLQLQ 368
>gi|140084327|gb|ABO84930.1| Rhd6-like 1 [Physcomitrella patens]
Length = 762
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/63 (52%), Positives = 46/63 (73%), Gaps = 1/63 (1%)
Query: 350 RARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQV 409
RAR+G A D S+A RVRRE+ISER+K+LQ L+P +KV ML++ I+YVQ L+ Q+
Sbjct: 640 RARQGSANDPQSIAARVRRERISERLKVLQALIPNGDKVD-MVTMLEKAISYVQCLEFQI 698
Query: 410 EFL 412
+ L
Sbjct: 699 KML 701
>gi|449515887|ref|XP_004164979.1| PREDICTED: transcription factor UNE10-like [Cucumis sativus]
Length = 478
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/122 (37%), Positives = 68/122 (55%), Gaps = 14/122 (11%)
Query: 291 TTKVAEANASESSKNKRCKPNEGKANGNG--AVKAEDEGDDKQAKANNAKPPEPPKDYIH 348
TT ++ + +S +K C N + +V +DEGD K+ A ++
Sbjct: 238 TTATSQGSLDNTSSDKPCVKNTTVTTTDDHDSVCHKDEGDRKKENAKSS----------- 286
Query: 349 VRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQ 408
V +R +A H+ +ER RR+KI++RMK LQ LVP NK T KA MLDE+I Y++ LQ Q
Sbjct: 287 VSTKRSRAAAIHNQSERKRRDKINQRMKTLQKLVPNSNK-TDKASMLDEVIEYLKQLQAQ 345
Query: 409 VE 410
V+
Sbjct: 346 VQ 347
>gi|449445700|ref|XP_004140610.1| PREDICTED: transcription factor UNE10-like [Cucumis sativus]
Length = 478
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/122 (37%), Positives = 68/122 (55%), Gaps = 14/122 (11%)
Query: 291 TTKVAEANASESSKNKRCKPNEGKANGNG--AVKAEDEGDDKQAKANNAKPPEPPKDYIH 348
TT ++ + +S +K C N + +V +DEGD K+ A ++
Sbjct: 238 TTATSQGSLDNTSSDKPCVKNTTVTTTDDHDSVCHKDEGDRKKENAKSS----------- 286
Query: 349 VRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQ 408
V +R +A H+ +ER RR+KI++RMK LQ LVP NK T KA MLDE+I Y++ LQ Q
Sbjct: 287 VSTKRSRAAAIHNQSERKRRDKINQRMKTLQKLVPNSNK-TDKASMLDEVIEYLKQLQAQ 345
Query: 409 VE 410
V+
Sbjct: 346 VQ 347
>gi|413917616|gb|AFW57548.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 505
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 50/64 (78%), Gaps = 1/64 (1%)
Query: 351 ARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVE 410
A+R + + H+L+ER RR++I+E+M+ LQ+L+P CNKV K+ ML+E I Y+++LQ QV+
Sbjct: 318 AKRCRTAEVHNLSERRRRDRINEKMRALQELIPNCNKVD-KSSMLEEAIEYLKTLQLQVQ 376
Query: 411 FLSM 414
+SM
Sbjct: 377 MMSM 380
>gi|242084064|ref|XP_002442457.1| hypothetical protein SORBIDRAFT_08g020290 [Sorghum bicolor]
gi|241943150|gb|EES16295.1| hypothetical protein SORBIDRAFT_08g020290 [Sorghum bicolor]
Length = 353
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/68 (48%), Positives = 51/68 (75%), Gaps = 1/68 (1%)
Query: 351 ARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVE 410
+RR + H+L E+ RR KI+ER+K LQ LVPGC+K + +A LD+ I+Y++SLQ+QV+
Sbjct: 188 SRRSHHGEGHNLTEKRRRHKINERLKTLQKLVPGCSK-SNQASTLDQTIHYMKSLQQQVQ 246
Query: 411 FLSMKLAS 418
+S+ LA+
Sbjct: 247 AMSVGLAA 254
>gi|222623841|gb|EEE57973.1| hypothetical protein OsJ_08713 [Oryza sativa Japonica Group]
Length = 432
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/80 (51%), Positives = 48/80 (60%), Gaps = 23/80 (28%)
Query: 357 TDSHSLAERV----------------------RREKISERMKLLQDLVPGCNKVTGKALM 394
TD HS+AERV RRE+I+ERMK LQ+LVP NK T KA M
Sbjct: 220 TDPHSIAERVYHSPTTFPFSPPFFIASMPCCLRRERIAERMKALQELVPNANK-TDKASM 278
Query: 395 LDEIINYVQSLQRQVEFLSM 414
LDEII+YV+ LQ QV+ LSM
Sbjct: 279 LDEIIDYVKFLQLQVKVLSM 298
>gi|326525038|dbj|BAK07789.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 497
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 49/62 (79%), Gaps = 1/62 (1%)
Query: 352 RRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEF 411
+RG+ + H+++ER RR++I+E+M+ LQ+L+P CNK+ KA ML+E I Y+++LQ QV+
Sbjct: 325 KRGRTAEVHNMSERRRRDRINEKMRALQELIPNCNKID-KASMLEEAIEYLKTLQLQVQM 383
Query: 412 LS 413
+S
Sbjct: 384 MS 385
>gi|125541459|gb|EAY87854.1| hypothetical protein OsI_09276 [Oryza sativa Indica Group]
Length = 431
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/80 (51%), Positives = 48/80 (60%), Gaps = 23/80 (28%)
Query: 357 TDSHSLAERV----------------------RREKISERMKLLQDLVPGCNKVTGKALM 394
TD HS+AERV RRE+I+ERMK LQ+LVP NK T KA M
Sbjct: 219 TDPHSIAERVYHSPTTFPFSPPFFIASMPCCLRRERIAERMKALQELVPNANK-TDKASM 277
Query: 395 LDEIINYVQSLQRQVEFLSM 414
LDEII+YV+ LQ QV+ LSM
Sbjct: 278 LDEIIDYVKFLQLQVKVLSM 297
>gi|356534283|ref|XP_003535686.1| PREDICTED: transcription factor bHLH85-like [Glycine max]
Length = 358
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 50/77 (64%), Gaps = 1/77 (1%)
Query: 337 AKPPEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLD 396
+K P PP + RA G ATD SL R RRE+I+ER+++LQ+LVP KV + ML+
Sbjct: 252 SKDPAPPNLHRKSRATTGAATDPQSLYARKRRERINERLRILQNLVPNGTKV-DISTMLE 310
Query: 397 EIINYVQSLQRQVEFLS 413
E + YV+ LQ Q++ LS
Sbjct: 311 EAVQYVKFLQLQIKLLS 327
>gi|218196060|gb|EEC78487.1| hypothetical protein OsI_18387 [Oryza sativa Indica Group]
Length = 289
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 50/64 (78%), Gaps = 1/64 (1%)
Query: 351 ARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVE 410
++R + + H+L+ER RR++I+E+M+ LQ+L+P CNK+ KA ML+E I Y+++LQ QV+
Sbjct: 115 SKRSRTAEVHNLSERRRRDRINEKMRALQELIPNCNKI-DKASMLEEAIEYLKTLQLQVQ 173
Query: 411 FLSM 414
+SM
Sbjct: 174 MMSM 177
>gi|312282747|dbj|BAJ34239.1| unnamed protein product [Thellungiella halophila]
Length = 308
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 56/66 (84%), Gaps = 1/66 (1%)
Query: 349 VRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQ 408
VRARRGQATD HS+AER+RRE+I+ER++ LQ+LVP +K T +A M+DEI++YV+ L+ Q
Sbjct: 150 VRARRGQATDPHSIAERLRRERIAERIRALQELVPTVSK-TDRAAMIDEIVDYVKFLRLQ 208
Query: 409 VEFLSM 414
V+ LSM
Sbjct: 209 VKVLSM 214
>gi|326497797|dbj|BAK05983.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 386
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/91 (41%), Positives = 58/91 (63%), Gaps = 7/91 (7%)
Query: 331 QAKANNAKPPEP------PKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPG 384
+++A + PEP P+ ++R +A + H+L+E+ RR +I+E+MK LQ L+P
Sbjct: 132 ESEAGGSSEPEPHGTSDRPRGGGGSGSKRTRAAEVHNLSEKRRRSRINEKMKALQSLIPN 191
Query: 385 CNKVTGKALMLDEIINYVQSLQRQVEFLSMK 415
NK T KA MLDE I Y++ LQ QV+ LSM+
Sbjct: 192 SNK-TDKASMLDEAIEYLKQLQLQVQMLSMR 221
>gi|357129887|ref|XP_003566591.1| PREDICTED: transcription factor PIF1-like [Brachypodium distachyon]
Length = 448
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 49/62 (79%), Gaps = 1/62 (1%)
Query: 352 RRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEF 411
+RG+ + H+++ER RR++I+E+M+ LQ+L+P CNK+ KA ML+E I Y+++LQ QV+
Sbjct: 266 KRGRTAEVHNMSERRRRDRINEKMRALQELIPNCNKID-KASMLEEAIEYLKTLQLQVQM 324
Query: 412 LS 413
+S
Sbjct: 325 MS 326
>gi|224130812|ref|XP_002320931.1| predicted protein [Populus trichocarpa]
gi|222861704|gb|EEE99246.1| predicted protein [Populus trichocarpa]
Length = 555
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 51/64 (79%), Gaps = 1/64 (1%)
Query: 351 ARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVE 410
++R +AT+ H+L+ER RR++I+++M+ LQDL+P NKV KA ML E I+Y++SLQ QV+
Sbjct: 371 SKRRRATEIHNLSERKRRDRINKKMRALQDLIPNSNKVD-KASMLGEAIDYLKSLQLQVQ 429
Query: 411 FLSM 414
+SM
Sbjct: 430 MMSM 433
>gi|449448502|ref|XP_004142005.1| PREDICTED: uncharacterized protein LOC101217594 [Cucumis sativus]
Length = 406
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 49/65 (75%), Gaps = 1/65 (1%)
Query: 351 ARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVE 410
++R +A + H+L+E+ RR +I+E+MK LQ+L+P NK T KA MLDE I Y++ LQ QV+
Sbjct: 170 SKRSRAAEVHNLSEKRRRSRINEKMKALQNLIPNSNK-TDKASMLDEAIEYLKQLQLQVQ 228
Query: 411 FLSMK 415
LSM+
Sbjct: 229 MLSMR 233
>gi|357119457|ref|XP_003561456.1| PREDICTED: transcription factor PIF1-like [Brachypodium distachyon]
Length = 334
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/63 (52%), Positives = 48/63 (76%), Gaps = 1/63 (1%)
Query: 352 RRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEF 411
RR +A + H+ +ER RR++I+E+MK LQ+LVP CNK + KA +LDE I Y++SLQ QV+
Sbjct: 140 RRARAAEVHNQSERRRRDRINEKMKALQELVPHCNK-SDKASILDEAIEYLKSLQLQVQI 198
Query: 412 LSM 414
+ M
Sbjct: 199 MWM 201
>gi|118486519|gb|ABK95099.1| unknown [Populus trichocarpa]
Length = 561
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 51/64 (79%), Gaps = 1/64 (1%)
Query: 351 ARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVE 410
++R +AT+ H+L+ER RR++I+++M+ LQDL+P NKV KA ML E I+Y++SLQ QV+
Sbjct: 377 SKRRRATEIHNLSERKRRDRINKKMRALQDLIPNSNKVD-KASMLGEAIDYLKSLQLQVQ 435
Query: 411 FLSM 414
+SM
Sbjct: 436 MMSM 439
>gi|326511035|dbj|BAJ91865.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 296
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 44/100 (44%), Positives = 64/100 (64%), Gaps = 9/100 (9%)
Query: 317 GNGAVKAEDEGDDKQA-KANNAKPPEPPKDYIHVRARRGQATDSHSLAERVRREKISERM 375
G G V A D GD ++A ++ ++P P R +R +A + H+L+E+ RR KI+E+M
Sbjct: 18 GMGFVPA-DRGDSEEALGSSESEPAGRP------RGKRARAAEVHNLSEKRRRCKINEKM 70
Query: 376 KLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMK 415
K LQ LVP +K T KA MLD+ I Y++ LQ QV+ LSM+
Sbjct: 71 KALQSLVPNSSK-TDKASMLDDAIEYLKHLQLQVQMLSMR 109
>gi|226502090|ref|NP_001146660.1| uncharacterized protein LOC100280260 [Zea mays]
gi|219888217|gb|ACL54483.1| unknown [Zea mays]
gi|414868921|tpg|DAA47478.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 397
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 48/64 (75%), Gaps = 1/64 (1%)
Query: 351 ARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVE 410
A+R +A H+L+ER RR++I+E+MK LQ+L+P CNK KA MLDE I Y++SLQ Q++
Sbjct: 247 AKRRRAAQVHNLSERRRRDRINEKMKALQELIPHCNKAD-KASMLDEAIEYLKSLQLQLQ 305
Query: 411 FLSM 414
+ M
Sbjct: 306 VVWM 309
>gi|449485549|ref|XP_004157205.1| PREDICTED: uncharacterized protein LOC101227644 [Cucumis sativus]
Length = 415
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 49/65 (75%), Gaps = 1/65 (1%)
Query: 351 ARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVE 410
++R +A + H+L+E+ RR +I+E+MK LQ+L+P NK T KA MLDE I Y++ LQ QV+
Sbjct: 170 SKRSRAAEVHNLSEKRRRSRINEKMKALQNLIPNSNK-TDKASMLDEAIEYLKQLQLQVQ 228
Query: 411 FLSMK 415
LSM+
Sbjct: 229 MLSMR 233
>gi|225460440|ref|XP_002271390.1| PREDICTED: transcription factor bHLH80-like [Vitis vinifera]
Length = 251
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 34/66 (51%), Positives = 49/66 (74%)
Query: 348 HVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQR 407
VRA+RG AT S+AERVRR +IS+R++ LQ+LVP +K T A ML+E + YV+ LQ+
Sbjct: 174 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQELVPNMDKQTNTADMLEEAVEYVKFLQQ 233
Query: 408 QVEFLS 413
+++ LS
Sbjct: 234 KIQELS 239
>gi|414876674|tpg|DAA53805.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 149
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/126 (41%), Positives = 73/126 (57%), Gaps = 13/126 (10%)
Query: 387 KVTGKALMLDEIINYVQSLQRQVEFLSMKLASVNTRLELN-VDALMSKDIYQPNKPLPHS 445
+V G A+ML EIINYVQSLQRQVEF+SMKLA+VN +++LN + ++ KD P PH
Sbjct: 33 QVVGNAVMLGEIINYVQSLQRQVEFMSMKLATVNPQVDLNSLPNVLPKDSCGP----PH- 87
Query: 446 IFQIDSS-ASAFFSHQPQQNPALHGNISNGTMTQCPVDPLDNALCRNLSMQLPQLEQFTE 504
F +++S AS + QP L G + N Q + PLD C +++Q L ++
Sbjct: 88 -FSLETSGASLSYLSQPHHGSPL-GCMDN----QSCMHPLDTTFCLAINLQYHFLNGVSD 141
Query: 505 TIPQFQ 510
Q Q
Sbjct: 142 ASSQLQ 147
>gi|168042242|ref|XP_001773598.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162675137|gb|EDQ61636.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 538
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 37/63 (58%), Positives = 44/63 (69%), Gaps = 1/63 (1%)
Query: 350 RARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQV 409
RA+RG ATD S+ R RREKI+ER+K LQ+LVP KV MLDE I+YV+ LQ QV
Sbjct: 443 RAKRGSATDPQSVYARHRREKINERLKNLQNLVPNGAKV-DIVTMLDEAIHYVKFLQTQV 501
Query: 410 EFL 412
E L
Sbjct: 502 ELL 504
>gi|357113061|ref|XP_003558323.1| PREDICTED: transcription factor PIF5-like [Brachypodium distachyon]
Length = 418
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 55/93 (59%), Gaps = 1/93 (1%)
Query: 322 KAEDEGDDKQAKANNAKPPEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDL 381
+ D+ D + A E H RR +A + H+ +ER RR++I+E+M+ LQ+L
Sbjct: 202 RGRDDSDSRSEDAEFEATEETKSSRRHGSKRRSRAAEVHNQSERRRRDRINEKMRSLQEL 261
Query: 382 VPGCNKVTGKALMLDEIINYVQSLQRQVEFLSM 414
+P CNK KA +LDE I Y++SLQ Q++ + M
Sbjct: 262 IPHCNKAD-KASILDEAIEYLKSLQMQLQIMWM 293
>gi|47497022|dbj|BAD19075.1| basic helix-loop-helix (bHLH) -like [Oryza sativa Japonica Group]
gi|47497231|dbj|BAD19276.1| basic helix-loop-helix (bHLH) -like [Oryza sativa Japonica Group]
Length = 463
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/80 (51%), Positives = 48/80 (60%), Gaps = 23/80 (28%)
Query: 357 TDSHSLAERV----------------------RREKISERMKLLQDLVPGCNKVTGKALM 394
TD HS+AERV RRE+I+ERMK LQ+LVP NK T KA M
Sbjct: 220 TDPHSIAERVYHSPTTFPFSPPFFIASMPCCLRRERIAERMKALQELVPNANK-TDKASM 278
Query: 395 LDEIINYVQSLQRQVEFLSM 414
LDEII+YV+ LQ QV+ LSM
Sbjct: 279 LDEIIDYVKFLQLQVKVLSM 298
>gi|222630134|gb|EEE62266.1| hypothetical protein OsJ_17053 [Oryza sativa Japonica Group]
Length = 404
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 50/64 (78%), Gaps = 1/64 (1%)
Query: 351 ARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVE 410
++R + + H+L+ER RR++I+E+M+ LQ+L+P CNK+ KA ML+E I Y+++LQ QV+
Sbjct: 210 SKRSRTAEVHNLSERRRRDRINEKMRALQELIPNCNKID-KASMLEEAIEYLKTLQLQVQ 268
Query: 411 FLSM 414
+SM
Sbjct: 269 MMSM 272
>gi|224139834|ref|XP_002323299.1| predicted protein [Populus trichocarpa]
gi|222867929|gb|EEF05060.1| predicted protein [Populus trichocarpa]
Length = 107
Score = 69.3 bits (168), Expect = 5e-09, Method: Composition-based stats.
Identities = 35/65 (53%), Positives = 48/65 (73%)
Query: 349 VRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQ 408
+RA+RG AT S+AERVRR +ISERM+ LQ+LVP +K T A MLD ++Y++ LQ+Q
Sbjct: 30 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQKQ 89
Query: 409 VEFLS 413
+ LS
Sbjct: 90 YKTLS 94
>gi|449475553|ref|XP_004154488.1| PREDICTED: transcription factor bHLH82-like [Cucumis sativus]
Length = 173
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 32/70 (45%), Positives = 49/70 (70%), Gaps = 7/70 (10%)
Query: 352 RRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKV-------TGKALMLDEIINYVQS 404
+R +A + H+L+ER RR++I+E+MK LQ+L+P CNK+ T KA MLDE I Y+++
Sbjct: 55 KRSRAAEVHNLSERRRRDRINEKMKALQELIPRCNKLSSFTDSQTDKASMLDEAIEYLKT 114
Query: 405 LQRQVEFLSM 414
LQ QV+ +
Sbjct: 115 LQLQVQIFVL 124
>gi|242084066|ref|XP_002442458.1| hypothetical protein SORBIDRAFT_08g020300 [Sorghum bicolor]
gi|241943151|gb|EES16296.1| hypothetical protein SORBIDRAFT_08g020300 [Sorghum bicolor]
Length = 340
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 35/69 (50%), Positives = 51/69 (73%), Gaps = 4/69 (5%)
Query: 350 RARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQV 409
R+ G+A H+L E+ RR KI+ER+K LQ LVPGC+K + +A LD+ I+Y++SLQ QV
Sbjct: 162 RSHHGEA---HNLTEKRRRHKINERLKTLQQLVPGCSK-SNQASTLDQTIHYMKSLQHQV 217
Query: 410 EFLSMKLAS 418
+ +S+ LAS
Sbjct: 218 QAMSVGLAS 226
>gi|226499484|ref|NP_001146943.1| protein SPATULA [Zea mays]
gi|195605542|gb|ACG24601.1| protein SPATULA [Zea mays]
gi|414585417|tpg|DAA35988.1| TPA: putative HLH DNA-binding domain superfamily protein isoform 1
[Zea mays]
gi|414585418|tpg|DAA35989.1| TPA: putative HLH DNA-binding domain superfamily protein isoform 2
[Zea mays]
gi|414585419|tpg|DAA35990.1| TPA: putative HLH DNA-binding domain superfamily protein isoform 3
[Zea mays]
Length = 185
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 48/64 (75%), Gaps = 1/64 (1%)
Query: 351 ARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVE 410
RR ++ + H+ +ER RR+KI+E++K LQ+L+P CNK T K MLDE I+Y++SLQ Q++
Sbjct: 14 TRRSRSAEFHNFSERRRRDKINEKLKALQELLPNCNK-TDKVSMLDEAIDYLKSLQLQLQ 72
Query: 411 FLSM 414
L M
Sbjct: 73 MLVM 76
>gi|326519825|dbj|BAK00285.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 378
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 46/64 (71%)
Query: 349 VRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQ 408
VRA+RG AT S+AER RR +IS+R++ LQDLVP +K T + MLD ++Y++ LQ Q
Sbjct: 300 VRAKRGCATHPRSIAERERRTRISKRLRRLQDLVPNMDKQTNTSDMLDIAVDYIKVLQDQ 359
Query: 409 VEFL 412
+E L
Sbjct: 360 IEKL 363
>gi|42573075|ref|NP_974634.1| transcription factor bHLH23 [Arabidopsis thaliana]
gi|332660144|gb|AEE85544.1| transcription factor bHLH23 [Arabidopsis thaliana]
Length = 340
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 82/169 (48%), Gaps = 4/169 (2%)
Query: 250 ANSQEESSVSEQVPNDFNSRKRKAVSKGKGKETAASPSVNNTTKVAEANASESSKNKRCK 309
+NS SS +E +P + R V+ G + T A P + K + + CK
Sbjct: 171 SNSTLLSSATESIPATHGTESRATVTGGVSR-TFAVPGLGPRGKAVAIETAGTQSWGLCK 229
Query: 310 PNEGKANGNGAVKAE--DEGDDKQAKANNAKPPEPPKDYIHVRARRGQATDSHSLAERVR 367
A + + DE K + N + + ++R +A H L+ER R
Sbjct: 230 AETEPVQRQPATETDITDERKRKTREETNVENQGTEEARDSTSSKRSRAAIMHKLSERRR 289
Query: 368 REKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMKL 416
R+KI+E MK LQ+L+P C K T ++ MLD++I YV+SLQ Q++ +++
Sbjct: 290 RQKINEMMKALQELLPRCTK-TDRSSMLDDVIEYVKSLQSQIQGKHLRI 337
>gi|414879181|tpg|DAA56312.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 231
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 35/64 (54%), Positives = 45/64 (70%)
Query: 349 VRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQ 408
VRARRG AT S+AER RR +IS+R+K LQDLVP +K T + MLD + Y++ L+ Q
Sbjct: 152 VRARRGCATHPRSIAERERRTRISKRLKKLQDLVPNMDKQTNTSDMLDLAVEYIKELKDQ 211
Query: 409 VEFL 412
VE L
Sbjct: 212 VEKL 215
>gi|77556960|gb|ABA99756.1| Helix-loop-helix DNA-binding domain containing protein [Oryza
sativa Japonica Group]
gi|125537220|gb|EAY83708.1| hypothetical protein OsI_38930 [Oryza sativa Indica Group]
gi|125579902|gb|EAZ21048.1| hypothetical protein OsJ_36693 [Oryza sativa Japonica Group]
Length = 304
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 54/88 (61%), Gaps = 10/88 (11%)
Query: 350 RARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQV 409
RA RG ATD SL R RRE+I+ER+K LQ+LVP KV + ML+E ++YV+ LQ Q+
Sbjct: 217 RAGRGAATDPQSLYARKRRERINERLKTLQNLVPNGTKVD-ISTMLEEAVHYVKFLQLQI 275
Query: 410 EFLS---------MKLASVNTRLELNVD 428
+ LS + +N L+LN+D
Sbjct: 276 KLLSSDEMWMYAPIAYNGMNIGLDLNID 303
>gi|222635086|gb|EEE65218.1| hypothetical protein OsJ_20364 [Oryza sativa Japonica Group]
Length = 352
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 34/51 (66%), Positives = 42/51 (82%), Gaps = 1/51 (1%)
Query: 364 ERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSM 414
+R+RRE+I+ERMK LQ+LVP NK T KA MLDEII+YV+ LQ QV+ LSM
Sbjct: 151 QRLRRERIAERMKSLQELVPNANK-TDKASMLDEIIDYVKFLQLQVKVLSM 200
>gi|356562241|ref|XP_003549380.1| PREDICTED: uncharacterized protein LOC100780907 [Glycine max]
Length = 353
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/151 (35%), Positives = 80/151 (52%), Gaps = 25/151 (16%)
Query: 267 NSRKRKAVSK-GKG--KETAASPSVNNTTKVAEANASESSKN-KRCKPNEGKANGNGAVK 322
N +K+ VSK G+G K T + + +T+ EA + + + + C N
Sbjct: 198 NQKKKARVSKDGQGCMKNTWSKKNQKHTSNGEEAEETNTGLDGQSCSSN----------M 247
Query: 323 AEDEGDDKQAKANNAKPPEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLV 382
+ED+ K A +N K RA RG ATD SL R RRE+I+ER+++LQ+LV
Sbjct: 248 SEDDNTSKSALNSNGK----------TRASRGSATDPQSLYARKRRERINERLRILQNLV 297
Query: 383 PGCNKVTGKALMLDEIINYVQSLQRQVEFLS 413
P KV + ML+E +NYV+ LQ Q++ LS
Sbjct: 298 PNGTKV-DISTMLEEAVNYVKFLQLQIKLLS 327
>gi|168039365|ref|XP_001772168.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162676499|gb|EDQ62981.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 945
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 33/63 (52%), Positives = 46/63 (73%), Gaps = 1/63 (1%)
Query: 350 RARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQV 409
RAR+G A D S+A RVRRE+ISER+K+LQ L+P +KV ML++ I+YVQ L+ Q+
Sbjct: 823 RARQGSANDPQSIAARVRRERISERLKVLQALIPNGDKVD-MVTMLEKAISYVQCLEFQI 881
Query: 410 EFL 412
+ L
Sbjct: 882 KML 884
>gi|326487850|dbj|BAJ89764.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326508951|dbj|BAJ86868.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 396
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 48/67 (71%), Gaps = 1/67 (1%)
Query: 348 HVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQR 407
H RR +A + H+ +ER RR++I+E+M+ LQ+L+P CNK KA +LDE I Y++SLQ
Sbjct: 199 HGSKRRSRAAEVHNQSERRRRDRINEKMRSLQELIPHCNKAD-KASILDEAIEYLKSLQM 257
Query: 408 QVEFLSM 414
QV+ + M
Sbjct: 258 QVQVMWM 264
>gi|302813935|ref|XP_002988652.1| hypothetical protein SELMODRAFT_128445 [Selaginella moellendorffii]
gi|300143473|gb|EFJ10163.1| hypothetical protein SELMODRAFT_128445 [Selaginella moellendorffii]
Length = 61
Score = 68.9 bits (167), Expect = 7e-09, Method: Composition-based stats.
Identities = 31/39 (79%), Positives = 35/39 (89%)
Query: 349 VRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNK 387
VRARRGQATD HS+AER+RREKI+ERMK LQ+LVP NK
Sbjct: 1 VRARRGQATDPHSIAERLRREKIAERMKALQELVPNANK 39
>gi|356553958|ref|XP_003545317.1| PREDICTED: transcription factor ALC-like [Glycine max]
Length = 181
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 53/76 (69%), Gaps = 5/76 (6%)
Query: 337 AKPPEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLD 396
+KP PP+ ++R +A + H+L+E+ RR +I+E+MK LQ+L+P NK T KA MLD
Sbjct: 111 SKPVPPPRS----SSKRSRAAEFHNLSEKRRRSRINEKMKALQNLIPNSNK-TDKASMLD 165
Query: 397 EIINYVQSLQRQVEFL 412
E I Y++ LQ QV++L
Sbjct: 166 EAIEYLKQLQLQVQYL 181
>gi|296089503|emb|CBI39322.3| unnamed protein product [Vitis vinifera]
Length = 181
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 34/66 (51%), Positives = 49/66 (74%)
Query: 348 HVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQR 407
VRA+RG AT S+AERVRR +IS+R++ LQ+LVP +K T A ML+E + YV+ LQ+
Sbjct: 104 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQELVPNMDKQTNTADMLEEAVEYVKFLQQ 163
Query: 408 QVEFLS 413
+++ LS
Sbjct: 164 KIQELS 169
>gi|42569042|ref|NP_179083.2| transcription factor bHLH84 [Arabidopsis thaliana]
gi|75296240|sp|Q7XHI9.1|BH084_ARATH RecName: Full=Transcription factor bHLH84; AltName: Full=Basic
helix-loop-helix protein 84; Short=AtbHLH84; Short=bHLH
84; AltName: Full=bHLH transcription factor bHLH084
gi|33111969|emb|CAE12171.1| putative bHLH084 transcription factor [Arabidopsis thaliana]
gi|91806168|gb|ABE65812.1| basic helix-loop-helix protein/bHLH protein [Arabidopsis thaliana]
gi|330251237|gb|AEC06331.1| transcription factor bHLH84 [Arabidopsis thaliana]
Length = 328
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 42/106 (39%), Positives = 61/106 (57%), Gaps = 13/106 (12%)
Query: 308 CKPNEGKANGNGAVKAEDEGDDKQAKANNAKPPEPPKDYIHVRARRGQATDSHSLAERVR 367
C +E +NG ++++G+D +A N K RA RG ATD SL R R
Sbjct: 208 CSDDE--SNGGDTFLSKEDGEDSKALNLNGK----------TRASRGAATDPQSLYARKR 255
Query: 368 REKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLS 413
RE+I+ER+++LQ LVP KV + ML+E + YV+ LQ Q++ LS
Sbjct: 256 RERINERLRILQHLVPNGTKV-DISTMLEEAVQYVKFLQLQIKLLS 300
>gi|326505558|dbj|BAJ95450.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 387
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 48/67 (71%), Gaps = 1/67 (1%)
Query: 348 HVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQR 407
H RR +A + H+ +ER RR++I+E+M+ LQ+L+P CNK KA +LDE I Y++SLQ
Sbjct: 190 HGSKRRSRAAEVHNQSERRRRDRINEKMRSLQELIPHCNKAD-KASILDEAIEYLKSLQM 248
Query: 408 QVEFLSM 414
QV+ + M
Sbjct: 249 QVQVMWM 255
>gi|116831075|gb|ABK28492.1| unknown [Arabidopsis thaliana]
Length = 329
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 42/106 (39%), Positives = 61/106 (57%), Gaps = 13/106 (12%)
Query: 308 CKPNEGKANGNGAVKAEDEGDDKQAKANNAKPPEPPKDYIHVRARRGQATDSHSLAERVR 367
C +E +NG ++++G+D +A N K RA RG ATD SL R R
Sbjct: 208 CSDDE--SNGGDTFLSKEDGEDSKALNLNGK----------TRASRGAATDPQSLYARKR 255
Query: 368 REKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLS 413
RE+I+ER+++LQ LVP KV + ML+E + YV+ LQ Q++ LS
Sbjct: 256 RERINERLRILQHLVPNGTKVD-ISTMLEEAVQYVKFLQLQIKLLS 300
>gi|357504213|ref|XP_003622395.1| BHLH transcription factor [Medicago truncatula]
gi|355497410|gb|AES78613.1| BHLH transcription factor [Medicago truncatula]
Length = 141
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 33/45 (73%), Positives = 37/45 (82%), Gaps = 1/45 (2%)
Query: 367 RREKISERMKLLQDLVPGCNK-VTGKALMLDEIINYVQSLQRQVE 410
RREKISER+K+L+DLVP K V GK LML EIINY+QSLQ QVE
Sbjct: 60 RREKISERIKMLEDLVPRYTKLVIGKTLMLYEIINYIQSLQHQVE 104
>gi|302810858|ref|XP_002987119.1| hypothetical protein SELMODRAFT_28264 [Selaginella moellendorffii]
gi|300145016|gb|EFJ11695.1| hypothetical protein SELMODRAFT_28264 [Selaginella moellendorffii]
Length = 85
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 34/62 (54%), Positives = 46/62 (74%)
Query: 348 HVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQR 407
+RA+RG AT S+AERVRR +ISERM+ LQ+LVP +K T + MLDE + Y++ LQ+
Sbjct: 24 RLRAKRGCATHPRSIAERVRRTRISERMRRLQELVPNMDKQTNTSDMLDEAVEYMKFLQK 83
Query: 408 QV 409
QV
Sbjct: 84 QV 85
>gi|357126351|ref|XP_003564851.1| PREDICTED: transcription factor bHLH128-like [Brachypodium
distachyon]
Length = 373
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 46/64 (71%)
Query: 349 VRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQ 408
VRA+RG AT S+AER RR +IS+R++ LQDLVP +K T + MLD ++Y++ LQ Q
Sbjct: 295 VRAKRGCATHPRSIAERERRTRISKRLRKLQDLVPNMDKQTNTSDMLDIAVDYIKVLQDQ 354
Query: 409 VEFL 412
+E L
Sbjct: 355 IEKL 358
>gi|240256101|ref|NP_194609.5| basic helix-loop-helix domain-containing protein [Arabidopsis
thaliana]
gi|378405153|sp|Q9SVU7.2|BH056_ARATH RecName: Full=Putative transcription factor bHLH056; AltName:
Full=Basic helix-loop-helix protein 56; Short=AtbHLH56;
Short=bHLH 56; AltName: Full=Transcription factor EN
106; AltName: Full=bHLH transcription factor bHLH056
gi|332660146|gb|AEE85546.1| basic helix-loop-helix domain-containing protein [Arabidopsis
thaliana]
Length = 445
Score = 68.6 bits (166), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 37/96 (38%), Positives = 54/96 (56%), Gaps = 1/96 (1%)
Query: 352 RRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEF 411
+R + + H+LAER RREKI+E+MK LQ L+P CNK T K LD+ I YV+SLQ Q++
Sbjct: 252 KRSRTAEMHNLAERRRREKINEKMKTLQQLIPRCNKST-KVSTLDDAIEYVKSLQSQIQG 310
Query: 412 LSMKLASVNTRLELNVDALMSKDIYQPNKPLPHSIF 447
+ + + + M + P P P + F
Sbjct: 311 MMSPMMNAGNTQQFMPHMAMDMNRPPPFIPFPGTSF 346
>gi|125554209|gb|EAY99814.1| hypothetical protein OsI_21804 [Oryza sativa Indica Group]
Length = 315
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 48/65 (73%), Gaps = 1/65 (1%)
Query: 351 ARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVE 410
++R +A + H+L+E+ RR KI+E+MK LQ L+P NK T KA MLDE I Y++ LQ QV+
Sbjct: 99 SKRSRAAEVHNLSEKRRRSKINEKMKALQSLIPNSNK-TDKASMLDEAIEYLKQLQLQVQ 157
Query: 411 FLSMK 415
LSM+
Sbjct: 158 MLSMR 162
>gi|242092116|ref|XP_002436548.1| hypothetical protein SORBIDRAFT_10g004500 [Sorghum bicolor]
gi|241914771|gb|EER87915.1| hypothetical protein SORBIDRAFT_10g004500 [Sorghum bicolor]
Length = 291
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/104 (40%), Positives = 62/104 (59%), Gaps = 4/104 (3%)
Query: 315 ANGNGAVKAEDEGDDKQAKANNAKPPEPPK---DYIHVRARRGQATDSHSLAERVRREKI 371
+G+ ED G + A ++P PP+ ++R +A + H+L+E+ RR KI
Sbjct: 40 GHGHQVDYGEDAGGLGDSDAGGSEPEAPPERTRGGGGSGSKRSRAAEVHNLSEKRRRSKI 99
Query: 372 SERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMK 415
+E+MK LQ L+P NK T KA MLDE I Y++ LQ QV+ LSM+
Sbjct: 100 NEKMKALQSLIPNSNK-TDKASMLDEAIEYLKQLQLQVQMLSMR 142
>gi|55296133|dbj|BAD67851.1| basic helix-loop-helix protein SPATULA-like [Oryza sativa Japonica
Group]
gi|125596157|gb|EAZ35937.1| hypothetical protein OsJ_20240 [Oryza sativa Japonica Group]
Length = 315
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 48/65 (73%), Gaps = 1/65 (1%)
Query: 351 ARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVE 410
++R +A + H+L+E+ RR KI+E+MK LQ L+P NK T KA MLDE I Y++ LQ QV+
Sbjct: 99 SKRSRAAEVHNLSEKRRRSKINEKMKALQSLIPNSNK-TDKASMLDEAIEYLKQLQLQVQ 157
Query: 411 FLSMK 415
LSM+
Sbjct: 158 MLSMR 162
>gi|222619693|gb|EEE55825.1| hypothetical protein OsJ_04431 [Oryza sativa Japonica Group]
Length = 171
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/72 (48%), Positives = 46/72 (63%)
Query: 341 EPPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIIN 400
+P RA+RG AT S+AER RR +IS+R+K LQDLVP +K T + MLD +
Sbjct: 85 QPDSVACRARAKRGCATHPRSIAERERRTRISKRLKKLQDLVPNMDKQTNTSDMLDIAVT 144
Query: 401 YVQSLQRQVEFL 412
Y++ LQ QVE L
Sbjct: 145 YIKELQGQVEKL 156
>gi|356553998|ref|XP_003545337.1| PREDICTED: uncharacterized protein LOC100797500 [Glycine max]
Length = 350
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 46/65 (70%), Gaps = 1/65 (1%)
Query: 349 VRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQ 408
RA RG ATD SL R RRE+I+ER+++LQ+LVP KV + ML+E +NYV+ LQ Q
Sbjct: 261 TRASRGSATDPQSLYARKRRERINERLRILQNLVPNGTKVD-ISTMLEEAVNYVKFLQLQ 319
Query: 409 VEFLS 413
++ LS
Sbjct: 320 IKLLS 324
>gi|28207148|gb|AAO37214.1| hypothetical protein [Arabidopsis thaliana]
Length = 416
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 57/97 (58%), Gaps = 19/97 (19%)
Query: 323 AEDEGDDKQAKANNAKPPEPPKDYIHVRAR-----RGQATDSHSLAERVRREKISERMKL 377
++DE DD + + +H R R R ++T+ H L ER RR++ +++M+
Sbjct: 205 SDDESDDAKTQ-------------VHARTRKPVTKRKRSTEVHKLYERKRRDEFNKKMRA 251
Query: 378 LQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSM 414
LQDL+P C K KA +LDE I Y+++LQ QV+ +SM
Sbjct: 252 LQDLLPNCYK-DDKASLLDEAIKYMRTLQLQVQMMSM 287
>gi|42569994|ref|NP_182220.2| transcription factor PIL1 [Arabidopsis thaliana]
gi|75301051|sp|Q8L5W8.1|PIL1_ARATH RecName: Full=Transcription factor PIL1; AltName: Full=Basic
helix-loop-helix protein 124; Short=AtbHLH124;
Short=bHLH 124; AltName: Full=Protein PHYTOCHROME
INTERACTING FACTOR 3-LIKE 1; AltName: Full=Transcription
factor EN 110; AltName: Full=bHLH transcription factor
bHLH124
gi|22535492|dbj|BAC10689.1| PIF3 like basic Helix Loop Helix protein [Arabidopsis thaliana]
gi|61742691|gb|AAX55166.1| hypothetical protein At2g46970 [Arabidopsis thaliana]
gi|330255685|gb|AEC10779.1| transcription factor PIL1 [Arabidopsis thaliana]
Length = 416
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 57/97 (58%), Gaps = 19/97 (19%)
Query: 323 AEDEGDDKQAKANNAKPPEPPKDYIHVRAR-----RGQATDSHSLAERVRREKISERMKL 377
++DE DD + + +H R R R ++T+ H L ER RR++ +++M+
Sbjct: 205 SDDESDDAKTQ-------------VHARTRKPVTKRKRSTEVHKLYERKRRDEFNKKMRA 251
Query: 378 LQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSM 414
LQDL+P C K KA +LDE I Y+++LQ QV+ +SM
Sbjct: 252 LQDLLPNCYK-DDKASLLDEAIKYMRTLQLQVQMMSM 287
>gi|357118625|ref|XP_003561052.1| PREDICTED: uncharacterized protein LOC100821164 [Brachypodium
distachyon]
Length = 331
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 48/65 (73%), Gaps = 1/65 (1%)
Query: 351 ARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVE 410
++R +A + H+L+E+ RR +I+E+MK LQ L+P NK T KA MLDE I Y++ LQ QV+
Sbjct: 102 SKRTRAAEVHNLSEKRRRSRINEKMKALQSLIPNSNK-TDKASMLDEAIEYLKQLQLQVQ 160
Query: 411 FLSMK 415
LSM+
Sbjct: 161 MLSMR 165
>gi|31043851|emb|CAD32238.1| BP-5 protein [Oryza sativa]
Length = 335
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/66 (51%), Positives = 49/66 (74%), Gaps = 3/66 (4%)
Query: 351 ARRGQATDSHSLAERVRREKISERMKLLQ--DLVPGCNKVTGKALMLDEIINYVQSLQRQ 408
ARR +A + H+L+ER RR++I+E+M+ LQ +L+P CNK T KA MLDE I Y++SLQ Q
Sbjct: 162 ARRSRAAEVHNLSERRRRDRINEKMRALQELELIPHCNK-TDKASMLDEAIEYLKSLQLQ 220
Query: 409 VEFLSM 414
+ + M
Sbjct: 221 LRVMWM 226
>gi|357165982|ref|XP_003580559.1| PREDICTED: transcription factor PIF1-like [Brachypodium distachyon]
Length = 198
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 47/64 (73%), Gaps = 1/64 (1%)
Query: 351 ARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVE 410
RR ++ D H+ +ER RR++I+E++K LQ+L+P C K T K MLDE I+Y++SLQ Q++
Sbjct: 16 TRRSRSADFHNFSERRRRDRINEKLKALQELLPNCTK-TDKVSMLDEAIDYLKSLQLQLQ 74
Query: 411 FLSM 414
L M
Sbjct: 75 MLVM 78
>gi|140084334|gb|ABO84931.1| Rhd6-like 2 [Physcomitrella patens]
Length = 173
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/63 (52%), Positives = 45/63 (71%), Gaps = 1/63 (1%)
Query: 350 RARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQV 409
RAR+G A D S+A RVRRE+ISER+K+LQ L+P +KV ML++ I YVQ L+ Q+
Sbjct: 49 RARQGSANDPQSIAARVRRERISERLKVLQALIPNGDKVD-MVTMLEKAITYVQCLELQI 107
Query: 410 EFL 412
+ L
Sbjct: 108 KML 110
>gi|359480799|ref|XP_002277966.2| PREDICTED: uncharacterized protein LOC100245665 [Vitis vinifera]
gi|296082405|emb|CBI21410.3| unnamed protein product [Vitis vinifera]
Length = 394
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 49/65 (75%), Gaps = 1/65 (1%)
Query: 351 ARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVE 410
++R +A + H+L+E+ RR +I+E+MK LQ+L+P NK T KA MLDE I Y++ LQ QV+
Sbjct: 135 SKRSRAAEVHNLSEKRRRSRINEKMKALQNLIPNSNK-TDKASMLDEAIEYLKQLQLQVQ 193
Query: 411 FLSMK 415
LSM+
Sbjct: 194 MLSMR 198
>gi|297845732|ref|XP_002890747.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297336589|gb|EFH67006.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 258
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/130 (35%), Positives = 66/130 (50%), Gaps = 14/130 (10%)
Query: 289 NNTTKVAEANASESSKNKRCKP-----NEGKANGNGAVKAEDEGDDKQAKANNAKPPEPP 343
N+ V ++S K +R P +E N + DD++A + K
Sbjct: 110 NSNCDVTRQELAKSKKKQRVSPESNTVDESNTNWIDGQSLSNSSDDEKASVTSVKGK--- 166
Query: 344 KDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQ 403
RA +G ATD SL R RREKI+ER+K LQ+LVP KV + ML+E ++YV+
Sbjct: 167 -----TRATKGTATDPQSLYARKRREKINERLKTLQNLVPNGTKV-DISTMLEEAVHYVK 220
Query: 404 SLQRQVEFLS 413
LQ Q++ LS
Sbjct: 221 FLQLQIKLLS 230
>gi|295881692|gb|ADG56590.1| ALCATRAZ/SPATULA-like protein [Prunus persica]
Length = 386
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 49/65 (75%), Gaps = 1/65 (1%)
Query: 351 ARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVE 410
++R +A + H+++E+ RR +I+E+MK LQ+L+P NK T KA MLDE I Y++ LQ QV+
Sbjct: 154 SKRSRAAEVHNMSEKRRRSRINEKMKALQNLIPNSNK-TDKASMLDEAIEYLKQLQLQVQ 212
Query: 411 FLSMK 415
LSM+
Sbjct: 213 MLSMR 217
>gi|302781847|ref|XP_002972697.1| hypothetical protein SELMODRAFT_413232 [Selaginella moellendorffii]
gi|300159298|gb|EFJ25918.1| hypothetical protein SELMODRAFT_413232 [Selaginella moellendorffii]
Length = 442
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/64 (53%), Positives = 46/64 (71%), Gaps = 1/64 (1%)
Query: 350 RARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQV 409
RAR+G A D S+A R RRE+IS+R+K+LQ+LVP KV ML++ INYV+ LQ QV
Sbjct: 359 RARQGSANDPQSIAARHRRERISDRLKILQELVPNSTKV-DLVTMLEKAINYVKFLQLQV 417
Query: 410 EFLS 413
+ L+
Sbjct: 418 KVLT 421
>gi|222080623|gb|ACM41588.1| bHLH transcription factor MYC5 [Catharanthus roseus]
Length = 321
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 49/65 (75%), Gaps = 1/65 (1%)
Query: 351 ARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVE 410
++R +A + H+L+E+ RR +I+E+MK LQ+L+P NK T KA MLDE I Y++ LQ QV+
Sbjct: 142 SKRSRAAEVHNLSEKRRRSRINEKMKALQNLIPNSNK-TDKASMLDEAIEYLKQLQLQVQ 200
Query: 411 FLSMK 415
L+M+
Sbjct: 201 MLTMR 205
>gi|225457285|ref|XP_002284441.1| PREDICTED: transcription factor UNE10-like [Vitis vinifera]
Length = 423
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/127 (33%), Positives = 72/127 (56%), Gaps = 12/127 (9%)
Query: 289 NNTTKVAEANASESSKNKRCKPNEGKANGNGAVKAEDEGDDKQAKANNAKPPEPPKDYIH 348
+N T + +SES ++ + K + + +G + +DE D++ K +
Sbjct: 168 DNETTMMTWPSSESPRSLKAKTTDEDSACHGGSENQDE--DRETKTQTGRSHS------- 218
Query: 349 VRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQ 408
RR +A H+ +ER RR++I+++MK LQ LVP +K T KA MLDE+I Y++ LQ Q
Sbjct: 219 --TRRSRAAAIHNQSERRRRDRINQKMKTLQKLVPNSSK-TDKASMLDEVIEYLKQLQAQ 275
Query: 409 VEFLSMK 415
V+ +S++
Sbjct: 276 VQMMSVR 282
>gi|255572912|ref|XP_002527387.1| DNA binding protein, putative [Ricinus communis]
gi|223533239|gb|EEF34994.1| DNA binding protein, putative [Ricinus communis]
Length = 377
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 50/76 (65%), Gaps = 2/76 (2%)
Query: 343 PKDYI--HVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIIN 400
P+D + +RA+RG AT S+AER RR +IS R+K LQDLVP +K T A MLD +
Sbjct: 291 PEDSVPCKIRAKRGCATHPRSIAERERRTRISGRLKKLQDLVPNMDKQTSYADMLDLAVQ 350
Query: 401 YVQSLQRQVEFLSMKL 416
+++ LQ +V+ L +L
Sbjct: 351 HIKGLQGEVQKLHKEL 366
>gi|226496303|ref|NP_001147052.1| protein SPATULA [Zea mays]
gi|195606902|gb|ACG25281.1| protein SPATULA [Zea mays]
Length = 215
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 47/63 (74%), Gaps = 1/63 (1%)
Query: 352 RRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEF 411
RR ++ D H+ +ER RR++I+E+++ LQ+L+P C K T K MLDE I+Y++SLQ Q++
Sbjct: 17 RRSRSADFHNFSERRRRDRINEKLRALQELLPNCTK-TDKVSMLDEAIDYLKSLQLQLQM 75
Query: 412 LSM 414
L M
Sbjct: 76 LVM 78
>gi|297733906|emb|CBI15153.3| unnamed protein product [Vitis vinifera]
Length = 385
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/127 (33%), Positives = 72/127 (56%), Gaps = 12/127 (9%)
Query: 289 NNTTKVAEANASESSKNKRCKPNEGKANGNGAVKAEDEGDDKQAKANNAKPPEPPKDYIH 348
+N T + +SES ++ + K + + +G + +DE D++ K +
Sbjct: 130 DNETTMMTWPSSESPRSLKAKTTDEDSACHGGSENQDE--DRETKTQTGRSHS------- 180
Query: 349 VRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQ 408
RR +A H+ +ER RR++I+++MK LQ LVP +K T KA MLDE+I Y++ LQ Q
Sbjct: 181 --TRRSRAAAIHNQSERRRRDRINQKMKTLQKLVPNSSK-TDKASMLDEVIEYLKQLQAQ 237
Query: 409 VEFLSMK 415
V+ +S++
Sbjct: 238 VQMMSVR 244
>gi|20161601|dbj|BAB90521.1| B1065G12.3 [Oryza sativa Japonica Group]
Length = 234
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/72 (48%), Positives = 46/72 (63%)
Query: 341 EPPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIIN 400
+P RA+RG AT S+AER RR +IS+R+K LQDLVP +K T + MLD +
Sbjct: 148 QPDSVACRARAKRGCATHPRSIAERERRTRISKRLKKLQDLVPNMDKQTNTSDMLDIAVT 207
Query: 401 YVQSLQRQVEFL 412
Y++ LQ QVE L
Sbjct: 208 YIKELQGQVEKL 219
>gi|296083058|emb|CBI22462.3| unnamed protein product [Vitis vinifera]
Length = 350
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/64 (53%), Positives = 45/64 (70%), Gaps = 1/64 (1%)
Query: 350 RARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQV 409
RA RG ATD SL R RRE+I+ER+K+LQ+LVP KV + ML+E + YV+ LQ Q+
Sbjct: 260 RASRGSATDPQSLYARKRRERINERLKILQNLVPNGTKVD-ISTMLEEAVEYVKFLQLQI 318
Query: 410 EFLS 413
+ LS
Sbjct: 319 KLLS 322
>gi|147866312|emb|CAN79863.1| hypothetical protein VITISV_021999 [Vitis vinifera]
Length = 346
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/66 (51%), Positives = 45/66 (68%), Gaps = 1/66 (1%)
Query: 348 HVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQR 407
RA RG ATD SL R RRE+I+ER+K+LQ+LVP KV + ML+E + YV+ LQ
Sbjct: 254 KARASRGSATDPQSLYARKRRERINERLKILQNLVPNGTKVD-ISTMLEEAVEYVKFLQL 312
Query: 408 QVEFLS 413
Q++ LS
Sbjct: 313 QIKLLS 318
>gi|242084068|ref|XP_002442459.1| hypothetical protein SORBIDRAFT_08g020320 [Sorghum bicolor]
gi|241943152|gb|EES16297.1| hypothetical protein SORBIDRAFT_08g020320 [Sorghum bicolor]
Length = 342
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 65/123 (52%), Gaps = 20/123 (16%)
Query: 296 EANASESSKNKRCKPNEGKANGNGAVKAEDEGDDKQAKANNAKPPEPPKDYIHVRARRGQ 355
E + K K EG GN +K N P P + R+ G+
Sbjct: 130 ETSTETDKKEKVPTTTEGVVMGNKVMK-------------NKAPAGGPSSW---RSHHGE 173
Query: 356 ATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMK 415
A H L E+ RR KI+ER+K LQ LVPGC+K + +A LD+ I+Y++SLQ+QV+ +S+
Sbjct: 174 A---HKLTEKRRRHKINERLKTLQQLVPGCSK-SNQASTLDQTIHYMKSLQQQVQAMSVG 229
Query: 416 LAS 418
LA+
Sbjct: 230 LAA 232
>gi|323388933|gb|ADX60271.1| bHLH transcription factor [Oryza sativa Japonica Group]
gi|323388951|gb|ADX60280.1| HLH transcription factor [Oryza sativa Japonica Group]
Length = 387
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/72 (48%), Positives = 46/72 (63%)
Query: 341 EPPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIIN 400
+P RA+RG AT S+AER RR +IS+R+K LQDLVP +K T + MLD +
Sbjct: 301 QPDSVACRARAKRGCATHPRSIAERERRTRISKRLKKLQDLVPNMDKQTNTSDMLDIAVT 360
Query: 401 YVQSLQRQVEFL 412
Y++ LQ QVE L
Sbjct: 361 YIKELQGQVEKL 372
>gi|115441653|ref|NP_001045106.1| Os01g0900800 [Oryza sativa Japonica Group]
gi|56784863|dbj|BAD82103.1| putative helix-loop-helix protein 1A [Oryza sativa Japonica Group]
gi|113534637|dbj|BAF07020.1| Os01g0900800 [Oryza sativa Japonica Group]
gi|215687014|dbj|BAG90828.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218189543|gb|EEC71970.1| hypothetical protein OsI_04807 [Oryza sativa Indica Group]
Length = 387
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/72 (48%), Positives = 46/72 (63%)
Query: 341 EPPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIIN 400
+P RA+RG AT S+AER RR +IS+R+K LQDLVP +K T + MLD +
Sbjct: 301 QPDSVACRARAKRGCATHPRSIAERERRTRISKRLKKLQDLVPNMDKQTNTSDMLDIAVT 360
Query: 401 YVQSLQRQVEFL 412
Y++ LQ QVE L
Sbjct: 361 YIKELQGQVEKL 372
>gi|388520611|gb|AFK48367.1| unknown [Lotus japonicus]
Length = 251
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 45/65 (69%)
Query: 349 VRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQ 408
+RA+RG AT S+AERVRR +ISE++K L+ L P +K T A MLD + Y++ LQ Q
Sbjct: 167 IRAKRGFATHPRSVAERVRRTRISEKIKKLEGLFPKSDKQTSTADMLDSAVEYIKDLQEQ 226
Query: 409 VEFLS 413
V+ L+
Sbjct: 227 VKTLT 231
>gi|225428979|ref|XP_002264083.1| PREDICTED: transcription factor bHLH84-like [Vitis vinifera]
Length = 345
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/64 (53%), Positives = 45/64 (70%), Gaps = 1/64 (1%)
Query: 350 RARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQV 409
RA RG ATD SL R RRE+I+ER+K+LQ+LVP KV + ML+E + YV+ LQ Q+
Sbjct: 255 RASRGSATDPQSLYARKRRERINERLKILQNLVPNGTKVD-ISTMLEEAVEYVKFLQLQI 313
Query: 410 EFLS 413
+ LS
Sbjct: 314 KLLS 317
>gi|357161826|ref|XP_003579215.1| PREDICTED: transcription factor bHLH139-like [Brachypodium
distachyon]
Length = 301
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 83/177 (46%), Gaps = 26/177 (14%)
Query: 239 GNKSPQDRSELA--NSQEESSVSEQVPNDFNSRKRKAVSKGKGKETAASPSVNNTTKVAE 296
G S +D + + N ++ SS E + D +R +K K + K T + VA
Sbjct: 126 GESSCEDLTSVGPTNKRKHSSAEEGI--DCQARGQKFARKAEPKRTKKTKQSGWEVAVAT 183
Query: 297 ANASESSKNKRCKPNEGKANGNGAVKAEDEGDDKQAKANNAKPPEPPKDYIHVRARRGQA 356
N S +S ++D+ + Q A+ P+ RA RG +
Sbjct: 184 RNGSTAS----------------CCTSDDDSNASQESADTGVCPKG-----KARAARGAS 222
Query: 357 TDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLS 413
TD SL R RRE+I+ER+K LQ LVP KV + ML+E ++YV+ LQ Q++ LS
Sbjct: 223 TDPQSLYARKRRERINERLKTLQTLVPNGTKVD-MSTMLEEAVHYVKFLQLQIKVLS 278
>gi|356503978|ref|XP_003520776.1| PREDICTED: uncharacterized protein LOC100804665 [Glycine max]
Length = 513
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 50/65 (76%), Gaps = 1/65 (1%)
Query: 350 RARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQV 409
R RR + H+L+E+ RREKI+++M+ L++L+P CNKV KA MLD+ I+Y+++L+ Q+
Sbjct: 321 RVRRIRNPVVHNLSEKKRREKINKKMRTLKELIPNCNKV-DKASMLDDAIDYLKTLKLQL 379
Query: 410 EFLSM 414
+ +SM
Sbjct: 380 QIMSM 384
>gi|223702406|gb|ACN21634.1| putative basic helix-loop-helix protein BHLH10 [Lotus japonicus]
Length = 338
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 53/87 (60%), Gaps = 10/87 (11%)
Query: 350 RARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQV 409
R+ RG ATD S+ R RREKI+ER+K+LQ+LVP KV + ML+E + YV+ LQ Q+
Sbjct: 247 RSERGSATDPQSIYARRRREKINERLKILQNLVPNGTKVD-ISTMLEEAVQYVKFLQLQI 305
Query: 410 EFLS---------MKLASVNTRLELNV 427
+ LS + +N L+LN+
Sbjct: 306 KLLSSDDLWMYAPIAFNGMNIGLDLNL 332
>gi|449531452|ref|XP_004172700.1| PREDICTED: uncharacterized protein LOC101229339 [Cucumis sativus]
Length = 379
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 49/65 (75%), Gaps = 1/65 (1%)
Query: 351 ARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVE 410
++R ++ + H+++E+ RR +I+E+MK LQ+L+P NK T KA MLDE I Y++ LQ QV+
Sbjct: 192 SKRSRSAEVHNMSEKRRRRRINEKMKALQNLIPNSNK-TDKASMLDEAIEYLKQLQLQVQ 250
Query: 411 FLSMK 415
LSM+
Sbjct: 251 MLSMR 255
>gi|224124904|ref|XP_002319451.1| predicted protein [Populus trichocarpa]
gi|222857827|gb|EEE95374.1| predicted protein [Populus trichocarpa]
Length = 59
Score = 67.0 bits (162), Expect = 2e-08, Method: Composition-based stats.
Identities = 32/59 (54%), Positives = 48/59 (81%), Gaps = 1/59 (1%)
Query: 352 RRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVE 410
+RG+A + H+L+ER RR++I+E+M+ LQ+L+P CNKV KA MLDE I Y+++LQ QV+
Sbjct: 1 KRGRAAEVHNLSERRRRDRINEKMRALQELIPNCNKVD-KASMLDEAIEYLKTLQLQVQ 58
>gi|20127093|gb|AAM10959.1|AF488616_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 352
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 46/65 (70%), Gaps = 1/65 (1%)
Query: 349 VRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQ 408
RA RG ATD SL R RRE+I+ER+++LQ+LVP KV + ML+E ++YV+ LQ Q
Sbjct: 266 TRASRGAATDPQSLYARKRRERINERLRILQNLVPNGTKVD-ISTMLEEAVHYVKFLQLQ 324
Query: 409 VEFLS 413
++ LS
Sbjct: 325 IKLLS 329
>gi|242055293|ref|XP_002456792.1| hypothetical protein SORBIDRAFT_03g042860 [Sorghum bicolor]
gi|241928767|gb|EES01912.1| hypothetical protein SORBIDRAFT_03g042860 [Sorghum bicolor]
Length = 361
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 46/64 (71%)
Query: 349 VRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQ 408
VRA+RG AT S+AER RR +IS+R+K LQDLVP +K T + MLD ++Y++ L+ +
Sbjct: 281 VRAKRGCATHPRSIAERERRTRISKRLKKLQDLVPNMDKQTNTSDMLDLAVDYIKELKDR 340
Query: 409 VEFL 412
VE L
Sbjct: 341 VEKL 344
>gi|297798526|ref|XP_002867147.1| hypothetical protein ARALYDRAFT_491291 [Arabidopsis lyrata subsp.
lyrata]
gi|297312983|gb|EFH43406.1| hypothetical protein ARALYDRAFT_491291 [Arabidopsis lyrata subsp.
lyrata]
Length = 351
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 46/65 (70%), Gaps = 1/65 (1%)
Query: 349 VRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQ 408
RA RG ATD SL R RRE+I+ER+++LQ+LVP KV + ML+E ++YV+ LQ Q
Sbjct: 265 TRASRGAATDPQSLYARKRRERINERLRILQNLVPNGTKVD-ISTMLEEAVHYVKFLQLQ 323
Query: 409 VEFLS 413
++ LS
Sbjct: 324 IKLLS 328
>gi|224067212|ref|XP_002302411.1| predicted protein [Populus trichocarpa]
gi|222844137|gb|EEE81684.1| predicted protein [Populus trichocarpa]
Length = 362
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
Query: 349 VRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQ 408
RA RG ATD SL R RRE+I+ER+K+LQ+LVP KV + ML+E ++YV LQ Q
Sbjct: 272 TRATRGAATDPQSLYARKRRERINERLKILQNLVPNGTKV-DISTMLEEAVHYVNFLQLQ 330
Query: 409 VEFLS 413
++ LS
Sbjct: 331 IKLLS 335
>gi|219363643|ref|NP_001136510.1| uncharacterized protein LOC100216625 [Zea mays]
gi|194688606|gb|ACF78387.1| unknown [Zea mays]
gi|223949339|gb|ACN28753.1| unknown [Zea mays]
gi|413939377|gb|AFW73928.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 280
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/96 (39%), Positives = 59/96 (61%), Gaps = 8/96 (8%)
Query: 320 AVKAEDEGDDKQAKANNAKPPEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQ 379
A E E ++++ A+P P R +R +A + H+L+E+ RR +I+E+MK LQ
Sbjct: 17 ATVCESEDALGSSESDPARPARP-------RGKRSRAAEVHNLSEKRRRSRINEKMKALQ 69
Query: 380 DLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMK 415
L+P +K T KA MLD+ I Y++ LQ QV+ LSM+
Sbjct: 70 TLIPNSSK-TDKASMLDDAIEYLKHLQLQVQMLSMR 104
>gi|224103739|ref|XP_002313175.1| predicted protein [Populus trichocarpa]
gi|222849583|gb|EEE87130.1| predicted protein [Populus trichocarpa]
Length = 354
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 44/65 (67%), Gaps = 1/65 (1%)
Query: 349 VRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQ 408
RA RG ATD SL R RRE+I+ER+++LQ LVP KV + ML+E + YV+ LQ Q
Sbjct: 264 TRASRGAATDPQSLYARKRRERINERLRILQTLVPNGTKVD-ISTMLEEAVQYVKFLQLQ 322
Query: 409 VEFLS 413
++ LS
Sbjct: 323 IKLLS 327
>gi|357437785|ref|XP_003589168.1| Transcription factor SPATULA [Medicago truncatula]
gi|355478216|gb|AES59419.1| Transcription factor SPATULA [Medicago truncatula]
Length = 287
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 48/65 (73%), Gaps = 1/65 (1%)
Query: 351 ARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVE 410
++R +A + H+L+E+ RR KI+E++K LQ+L+P NK T KA MLDE I Y++ LQ QV+
Sbjct: 87 SKRSRAAEFHNLSEKRRRSKINEKLKALQNLIPNSNK-TDKASMLDEAIEYLKQLQLQVQ 145
Query: 411 FLSMK 415
L ++
Sbjct: 146 MLMVR 150
>gi|226493752|ref|NP_001140849.1| uncharacterized protein LOC100272925 [Zea mays]
gi|194690530|gb|ACF79349.1| unknown [Zea mays]
gi|194701428|gb|ACF84798.1| unknown [Zea mays]
gi|223949911|gb|ACN29039.1| unknown [Zea mays]
gi|413919543|gb|AFW59475.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 214
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 47/64 (73%), Gaps = 1/64 (1%)
Query: 351 ARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVE 410
RR ++ D H+ +ER RR++I+E+++ LQ+L+P C K T K MLDE I+Y++SLQ Q++
Sbjct: 15 TRRSRSADFHNFSERRRRDRINEKLRALQELLPNCTK-TDKVSMLDEAIDYLKSLQLQLQ 73
Query: 411 FLSM 414
L M
Sbjct: 74 MLVM 77
>gi|147805319|emb|CAN71946.1| hypothetical protein VITISV_007899 [Vitis vinifera]
Length = 380
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 46/65 (70%), Gaps = 1/65 (1%)
Query: 349 VRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQ 408
RA RG ATD SL R RRE+I+ER+++LQ+LVP KV + ML+E ++YV+ LQ Q
Sbjct: 287 TRASRGSATDPQSLYARKRRERINERLRILQNLVPNGTKVD-ISTMLEEAVHYVKFLQLQ 345
Query: 409 VEFLS 413
++ LS
Sbjct: 346 IKLLS 350
>gi|413939376|gb|AFW73927.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 279
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/96 (39%), Positives = 59/96 (61%), Gaps = 8/96 (8%)
Query: 320 AVKAEDEGDDKQAKANNAKPPEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQ 379
A E E ++++ A+P P R +R +A + H+L+E+ RR +I+E+MK LQ
Sbjct: 17 ATVCESEDALGSSESDPARPARP-------RGKRSRAAEVHNLSEKRRRSRINEKMKALQ 69
Query: 380 DLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMK 415
L+P +K T KA MLD+ I Y++ LQ QV+ LSM+
Sbjct: 70 TLIPNSSK-TDKASMLDDAIEYLKHLQLQVQMLSMR 104
>gi|225458820|ref|XP_002283302.1| PREDICTED: transcription factor bHLH84 [Vitis vinifera]
Length = 380
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 46/65 (70%), Gaps = 1/65 (1%)
Query: 349 VRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQ 408
RA RG ATD SL R RRE+I+ER+++LQ+LVP KV + ML+E ++YV+ LQ Q
Sbjct: 287 TRASRGSATDPQSLYARKRRERINERLRILQNLVPNGTKVD-ISTMLEEAVHYVKFLQLQ 345
Query: 409 VEFLS 413
++ LS
Sbjct: 346 IKLLS 350
>gi|30689839|ref|NP_195114.2| transcription factor bHLH85 [Arabidopsis thaliana]
gi|75298259|sp|Q84WK0.1|BH085_ARATH RecName: Full=Transcription factor bHLH85; AltName: Full=Basic
helix-loop-helix protein 85; Short=AtbHLH85; Short=bHLH
85; AltName: Full=Transcription factor EN 115; AltName:
Full=bHLH transcription factor bHLH085
gi|27808578|gb|AAO24569.1| At4g33880 [Arabidopsis thaliana]
gi|110736194|dbj|BAF00068.1| putative bHLH transcription factor [Arabidopsis thaliana]
gi|332660887|gb|AEE86287.1| transcription factor bHLH85 [Arabidopsis thaliana]
Length = 352
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 46/65 (70%), Gaps = 1/65 (1%)
Query: 349 VRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQ 408
RA RG ATD SL R RRE+I+ER+++LQ+LVP KV + ML+E ++YV+ LQ Q
Sbjct: 266 TRASRGAATDPQSLYARKRRERINERLRILQNLVPNGTKVD-ISTMLEEAVHYVKFLQLQ 324
Query: 409 VEFLS 413
++ LS
Sbjct: 325 IKLLS 329
>gi|34393609|dbj|BAC83262.1| transcription factor (bHLH)-like protein [Oryza sativa Japonica
Group]
gi|50509377|dbj|BAD30932.1| transcription factor (bHLH)-like protein [Oryza sativa Japonica
Group]
gi|125600907|gb|EAZ40483.1| hypothetical protein OsJ_24937 [Oryza sativa Japonica Group]
Length = 279
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
Query: 349 VRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQ 408
RA RG ATD SL R RRE+I+ER+++LQ+LVP KV + ML+E + YV+ LQ Q
Sbjct: 187 TRANRGAATDPQSLYARKRRERINERLRILQNLVPNGTKV-DISTMLEEAVQYVKFLQLQ 245
Query: 409 VEFLS 413
++ LS
Sbjct: 246 IKLLS 250
>gi|3297812|emb|CAA19870.1| putative protein [Arabidopsis thaliana]
gi|7270337|emb|CAB80105.1| putative protein [Arabidopsis thaliana]
Length = 349
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 46/65 (70%), Gaps = 1/65 (1%)
Query: 349 VRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQ 408
RA RG ATD SL R RRE+I+ER+++LQ+LVP KV + ML+E ++YV+ LQ Q
Sbjct: 263 TRASRGAATDPQSLYARKRRERINERLRILQNLVPNGTKVD-ISTMLEEAVHYVKFLQLQ 321
Query: 409 VEFLS 413
++ LS
Sbjct: 322 IKLLS 326
>gi|255541166|ref|XP_002511647.1| DNA binding protein, putative [Ricinus communis]
gi|223548827|gb|EEF50316.1| DNA binding protein, putative [Ricinus communis]
Length = 465
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/86 (44%), Positives = 52/86 (60%), Gaps = 10/86 (11%)
Query: 328 DDKQAKANNAKPPEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNK 387
DD + KAN V +R +A H+ +ER RR+KI++RMK LQ LVP +K
Sbjct: 265 DDDKQKANGKS---------SVSTKRSRAAAIHNQSERKRRDKINQRMKTLQKLVPNSSK 315
Query: 388 VTGKALMLDEIINYVQSLQRQVEFLS 413
T KA MLDE+I Y++ LQ QV+ +S
Sbjct: 316 -TDKASMLDEVIEYLKQLQAQVQMMS 340
>gi|125558995|gb|EAZ04531.1| hypothetical protein OsI_26681 [Oryza sativa Indica Group]
Length = 279
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
Query: 349 VRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQ 408
RA RG ATD SL R RRE+I+ER+++LQ+LVP KV + ML+E + YV+ LQ Q
Sbjct: 187 TRANRGAATDPQSLYARKRRERINERLRILQNLVPNGTKV-DISTMLEEAVQYVKFLQLQ 245
Query: 409 VEFLS 413
++ LS
Sbjct: 246 IKLLS 250
>gi|255538082|ref|XP_002510106.1| transcription factor, putative [Ricinus communis]
gi|223550807|gb|EEF52293.1| transcription factor, putative [Ricinus communis]
Length = 327
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 54/87 (62%), Gaps = 9/87 (10%)
Query: 327 GDDKQAKANNAKPPEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCN 386
GD K ++A N+K RA RG ATD SL R RRE+I+ER+++LQ+LVP
Sbjct: 223 GDSKVSEALNSKG--------KARAGRGSATDPQSLYARKRRERINERLRILQNLVPNGT 274
Query: 387 KVTGKALMLDEIINYVQSLQRQVEFLS 413
KV + ML+E + YV+ LQ Q++ LS
Sbjct: 275 KVD-ISTMLEEAVQYVKFLQLQIKLLS 300
>gi|297828431|ref|XP_002882098.1| hypothetical protein ARALYDRAFT_904169 [Arabidopsis lyrata subsp.
lyrata]
gi|297327937|gb|EFH58357.1| hypothetical protein ARALYDRAFT_904169 [Arabidopsis lyrata subsp.
lyrata]
Length = 413
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 50/76 (65%), Gaps = 6/76 (7%)
Query: 344 KDYIHVRAR-----RGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEI 398
K +H R R R ++T+ H L ER RR++ +++M+ LQD++P C K KA +LDE
Sbjct: 210 KTQVHARIRKPVTKRKRSTEVHKLYERKRRDEFNKKMRALQDILPNCYK-DDKASLLDEA 268
Query: 399 INYVQSLQRQVEFLSM 414
+ Y+++LQ QV+ +SM
Sbjct: 269 VKYMRTLQHQVQMMSM 284
>gi|242074344|ref|XP_002447108.1| hypothetical protein SORBIDRAFT_06g028750 [Sorghum bicolor]
gi|241938291|gb|EES11436.1| hypothetical protein SORBIDRAFT_06g028750 [Sorghum bicolor]
Length = 188
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 47/64 (73%), Gaps = 1/64 (1%)
Query: 351 ARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVE 410
RR ++ + H+ +ER RR++I+E++K LQ+L+P C K T K MLDE I+Y++SLQ Q++
Sbjct: 15 TRRSRSAEFHNFSERRRRDRINEKLKALQELLPNCTK-TDKVSMLDEAIDYLKSLQLQLQ 73
Query: 411 FLSM 414
L M
Sbjct: 74 MLVM 77
>gi|357510373|ref|XP_003625475.1| Transcription factor PIF1 [Medicago truncatula]
gi|355500490|gb|AES81693.1| Transcription factor PIF1 [Medicago truncatula]
Length = 467
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 49/63 (77%), Gaps = 1/63 (1%)
Query: 352 RRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEF 411
+R +A + H+L+ER RR++I+E+MK LQ+L+P NK + KA MLDE I+Y++SLQ QV+
Sbjct: 255 KRSRAAEVHNLSERRRRDRINEKMKALQELIPRSNK-SDKASMLDEAIDYLKSLQLQVQR 313
Query: 412 LSM 414
+ +
Sbjct: 314 VQL 316
>gi|225437758|ref|XP_002273729.1| PREDICTED: uncharacterized protein LOC100253874 [Vitis vinifera]
Length = 569
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 50/64 (78%), Gaps = 1/64 (1%)
Query: 351 ARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVE 410
++R ++ + HSL+E+ RR++I+++M+ LQ+L+P C KV K +LDE I+Y+++LQ QV+
Sbjct: 379 SKRNRSAEGHSLSEKRRRDRINKKMRSLQELIPNCKKVD-KISILDEAIDYLKTLQLQVQ 437
Query: 411 FLSM 414
+SM
Sbjct: 438 VMSM 441
>gi|356576919|ref|XP_003556577.1| PREDICTED: transcription factor bHLH128-like [Glycine max]
Length = 286
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 50/76 (65%), Gaps = 2/76 (2%)
Query: 343 PKDYI--HVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIIN 400
P+D + +RA+RG AT S+AER RR +IS ++K LQDLVP +K T A MLD +
Sbjct: 200 PEDSVPCKIRAKRGCATHPRSIAERERRTRISGKLKKLQDLVPNMDKQTSYADMLDLAVQ 259
Query: 401 YVQSLQRQVEFLSMKL 416
+++ LQ QV+ L ++
Sbjct: 260 HIKGLQTQVQKLHKEM 275
>gi|302798757|ref|XP_002981138.1| hypothetical protein SELMODRAFT_114141 [Selaginella moellendorffii]
gi|300151192|gb|EFJ17839.1| hypothetical protein SELMODRAFT_114141 [Selaginella moellendorffii]
Length = 85
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/63 (50%), Positives = 48/63 (76%), Gaps = 1/63 (1%)
Query: 351 ARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVE 410
++R +A + H+L+ER RR++I+E+MK LQ+L+P NK T KA MLDE I Y++ LQ Q++
Sbjct: 16 SKRSRAAEVHNLSERRRRDRINEKMKALQELIPNSNK-TDKASMLDEAIEYLKMLQLQLQ 74
Query: 411 FLS 413
LS
Sbjct: 75 VLS 77
>gi|242066894|ref|XP_002454736.1| hypothetical protein SORBIDRAFT_04g036450 [Sorghum bicolor]
gi|241934567|gb|EES07712.1| hypothetical protein SORBIDRAFT_04g036450 [Sorghum bicolor]
Length = 277
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/66 (48%), Positives = 48/66 (72%), Gaps = 1/66 (1%)
Query: 350 RARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQV 409
R +R +A + H+L+E+ RR +I+E+MK LQ L+P +K T KA MLD+ I Y++ LQ QV
Sbjct: 41 RGKRSRAAEVHNLSEKRRRSRINEKMKALQTLIPNSSK-TDKASMLDDAIEYLKQLQLQV 99
Query: 410 EFLSMK 415
+ LSM+
Sbjct: 100 QMLSMR 105
>gi|255565242|ref|XP_002523613.1| conserved hypothetical protein [Ricinus communis]
gi|223537175|gb|EEF38808.1| conserved hypothetical protein [Ricinus communis]
Length = 406
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 49/65 (75%), Gaps = 1/65 (1%)
Query: 351 ARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVE 410
++R +A + H+L+E+ RR +I+E+MK LQ+L+P NK T KA MLDE I Y++ LQ QV+
Sbjct: 157 SKRSRAAEVHNLSEKRRRSRINEKMKALQNLIPNSNK-TDKASMLDEAIEYLKQLQLQVQ 215
Query: 411 FLSMK 415
LS++
Sbjct: 216 MLSLR 220
>gi|307135852|gb|ADN33721.1| serine/threonine-protein kinase [Cucumis melo subsp. melo]
Length = 842
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 60/98 (61%), Gaps = 3/98 (3%)
Query: 320 AVKAEDEGDDKQAKANNAKPPEPP--KDYIHVRARRGQATDSHSLAERVRREKISERMKL 377
+ +E++ D + PE P D ++R ++ + H+++E+ RR +I+E+MK
Sbjct: 159 GLSSENDLGDFSCDSEGGDLPEVPSSTDLPRNSSKRSRSAEVHNMSEKRRRRRINEKMKA 218
Query: 378 LQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMK 415
LQ+L+P NK T KA MLDE I Y++ LQ QV+ LSM+
Sbjct: 219 LQNLIPNSNK-TDKASMLDEAIEYLKQLQLQVQMLSMR 255
>gi|449469332|ref|XP_004152375.1| PREDICTED: transcription factor bHLH84-like [Cucumis sativus]
gi|449530384|ref|XP_004172175.1| PREDICTED: transcription factor bHLH84-like [Cucumis sativus]
Length = 341
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 47/134 (35%), Positives = 69/134 (51%), Gaps = 8/134 (5%)
Query: 280 KETAASPSVNNTTKVAEANASESSKNKRCKPNEGKANGNGAVKAEDEGDDKQAKANNAKP 339
++T S T+K+A + +E +++ PN G E D +A+ NN
Sbjct: 185 EKTKRSGRARKTSKIASGSCNE--EDQIVSPN-----GQCTSSFSSEDDCNEAQENNGGI 237
Query: 340 PEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEII 399
RA RG ATD SL R RRE+I+ER+++LQ LVP KV + ML+E +
Sbjct: 238 TSSSTSNGKPRASRGSATDPQSLYARKRRERINERLRILQSLVPNGTKV-DISTMLEEAV 296
Query: 400 NYVQSLQRQVEFLS 413
YV+ LQ Q++ LS
Sbjct: 297 QYVKFLQLQIKLLS 310
>gi|195639614|gb|ACG39275.1| hypothetical protein [Zea mays]
Length = 282
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 32/66 (48%), Positives = 48/66 (72%), Gaps = 1/66 (1%)
Query: 350 RARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQV 409
R +R +A + H+L+E+ RR +I+E+MK LQ L+P +K T KA MLD+ I Y++ LQ QV
Sbjct: 42 RGKRSRAAEVHNLSEKRRRSRINEKMKALQTLIPNSSK-TDKASMLDDAIEYLKHLQLQV 100
Query: 410 EFLSMK 415
+ LSM+
Sbjct: 101 QMLSMR 106
>gi|359478054|ref|XP_002268535.2| PREDICTED: transcription factor bHLH128 [Vitis vinifera]
Length = 357
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 51/76 (67%), Gaps = 2/76 (2%)
Query: 343 PKDYI--HVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIIN 400
P+D + VRA+RG AT S+AER RR +IS ++K LQDLVP +K T A MLD +
Sbjct: 271 PEDSVPCKVRAKRGCATHPRSIAERERRTRISGKLKKLQDLVPNMDKQTSYADMLDLAVQ 330
Query: 401 YVQSLQRQVEFLSMKL 416
+++ LQ +V+ L+ +L
Sbjct: 331 HIKGLQNEVQKLNKEL 346
>gi|224055255|ref|XP_002298446.1| predicted protein [Populus trichocarpa]
gi|222845704|gb|EEE83251.1| predicted protein [Populus trichocarpa]
Length = 413
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 45/65 (69%)
Query: 349 VRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQ 408
+RA+RG AT S+AERVRR +ISERM+ LQ+L P +K T A LD I ++ LQ+Q
Sbjct: 336 IRAKRGFATHPRSIAERVRRTRISERMRKLQELFPDMDKQTSTADKLDLSIELIKDLQKQ 395
Query: 409 VEFLS 413
V+ L+
Sbjct: 396 VKSLA 400
>gi|302788881|ref|XP_002976209.1| hypothetical protein SELMODRAFT_443113 [Selaginella moellendorffii]
gi|300155839|gb|EFJ22469.1| hypothetical protein SELMODRAFT_443113 [Selaginella moellendorffii]
Length = 512
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/70 (50%), Positives = 48/70 (68%), Gaps = 6/70 (8%)
Query: 349 VRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKV------TGKALMLDEIINYV 402
+RA+RG AT S+AERVRR +ISERM+ LQ+LVP +K T + MLDE + Y+
Sbjct: 416 LRAKRGCATHPRSIAERVRRTRISERMRRLQELVPNMDKSLAVIQQTNTSDMLDEAVEYM 475
Query: 403 QSLQRQVEFL 412
+ LQ+QV+ L
Sbjct: 476 KFLQKQVDDL 485
>gi|357480671|ref|XP_003610621.1| Transcription factor bHLH85 [Medicago truncatula]
gi|355511956|gb|AES93579.1| Transcription factor bHLH85 [Medicago truncatula]
Length = 331
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 45/64 (70%), Gaps = 1/64 (1%)
Query: 350 RARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQV 409
R+ RG ATD SL R RRE+I+ER+K+LQ+LVP KV + ML+E + YV+ LQ Q+
Sbjct: 225 RSSRGPATDPQSLYARKRRERINERLKILQNLVPNGTKV-DISTMLEEAVQYVKFLQLQI 283
Query: 410 EFLS 413
+ LS
Sbjct: 284 KLLS 287
>gi|449450552|ref|XP_004143026.1| PREDICTED: transcription factor bHLH49-like [Cucumis sativus]
gi|449522833|ref|XP_004168430.1| PREDICTED: transcription factor bHLH49-like [Cucumis sativus]
Length = 329
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 57/100 (57%), Gaps = 18/100 (18%)
Query: 314 KANGNGAVKAEDEGDDKQAKANNAKPPEPPKDYIHVRARRGQATDSHSLAERVRREKISE 373
+ANG G+ D G ++++ RA RG ATD SL R RRE+I+E
Sbjct: 219 EANGGGSGATSDGGVNRKS-----------------RASRGSATDPQSLYARKRRERINE 261
Query: 374 RMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLS 413
R+++LQ LVP KV + ML+E ++YV+ LQ Q++ LS
Sbjct: 262 RLRILQKLVPNGTKVD-ISTMLEEAVHYVKFLQLQIKLLS 300
>gi|449438623|ref|XP_004137087.1| PREDICTED: transcription factor bHLH85-like [Cucumis sativus]
gi|449495759|ref|XP_004159936.1| PREDICTED: transcription factor bHLH85-like [Cucumis sativus]
Length = 279
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 49/149 (32%), Positives = 73/149 (48%), Gaps = 14/149 (9%)
Query: 265 DFNSRKRKAVSKGKGKETAASPSVNNTTKVAEANASESSKNKRCKPNEGKANGNGAVKAE 324
+F +K ++ K + S N T + A S S + C +E A+
Sbjct: 113 EFGDHVQKGRNERSKKAQKLTSSTNTTEEDGNAGLSRQSTSTYCSEDESNASL------- 165
Query: 325 DEGDDKQAKANNAKPPEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPG 384
D+ ANN++ + RA RG ATD SL R RRE+I+ER+++LQ LVP
Sbjct: 166 ----DQNGGANNSRSSLNGAN--KSRASRGSATDPQSLYARKRRERINERLRILQTLVPN 219
Query: 385 CNKVTGKALMLDEIINYVQSLQRQVEFLS 413
KV + ML+E + YV+ LQ Q++ LS
Sbjct: 220 GTKV-DISTMLEEAVQYVKFLQLQIKLLS 247
>gi|255573157|ref|XP_002527508.1| DNA binding protein, putative [Ricinus communis]
gi|223533148|gb|EEF34906.1| DNA binding protein, putative [Ricinus communis]
Length = 296
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 46/65 (70%), Gaps = 1/65 (1%)
Query: 349 VRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQ 408
RA RG ATD S+ R RRE+I+ER+++LQ+LVP KV + ML+E ++YV+ LQ Q
Sbjct: 207 TRASRGAATDPQSIYARKRRERINERLRILQNLVPNGTKVD-ISTMLEEAVHYVKFLQLQ 265
Query: 409 VEFLS 413
++ LS
Sbjct: 266 IKLLS 270
>gi|15451582|gb|AAK98706.1|AC069158_18 Putative SPATULA [Oryza sativa Japonica Group]
Length = 298
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 32/66 (48%), Positives = 48/66 (72%), Gaps = 1/66 (1%)
Query: 350 RARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQV 409
R +R +A + H+L+E+ RR +I+E+MK LQ L+P +K T KA MLD+ I Y++ LQ QV
Sbjct: 27 RGKRSRAAEVHNLSEKRRRSRINEKMKALQSLIPNSSK-TDKASMLDDAIEYLKQLQLQV 85
Query: 410 EFLSMK 415
+ LSM+
Sbjct: 86 QMLSMR 91
>gi|302801726|ref|XP_002982619.1| hypothetical protein SELMODRAFT_116654 [Selaginella moellendorffii]
gi|300149718|gb|EFJ16372.1| hypothetical protein SELMODRAFT_116654 [Selaginella moellendorffii]
Length = 85
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 32/63 (50%), Positives = 48/63 (76%), Gaps = 1/63 (1%)
Query: 351 ARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVE 410
++R +A + H+L+ER RR++I+E+MK LQ+L+P NK T KA MLDE I Y++ LQ Q++
Sbjct: 16 SKRSRAAEVHNLSERRRRDRINEKMKALQELIPNSNK-TDKASMLDEAIEYLKMLQLQLQ 74
Query: 411 FLS 413
LS
Sbjct: 75 VLS 77
>gi|4678267|emb|CAB41175.1| putative protein [Arabidopsis thaliana]
Length = 137
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 28/47 (59%), Positives = 40/47 (85%)
Query: 388 VTGKALMLDEIINYVQSLQRQVEFLSMKLASVNTRLELNVDALMSKD 434
+ G AL+LDEIIN+VQSLQRQVE LSM+LA+VN R++ N+D +++ +
Sbjct: 1 IQGTALVLDEIINHVQSLQRQVEMLSMRLAAVNPRIDFNLDTILASE 47
>gi|356541324|ref|XP_003539128.1| PREDICTED: transcription factor UNE10-like [Glycine max]
Length = 459
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 37/86 (43%), Positives = 53/86 (61%), Gaps = 9/86 (10%)
Query: 327 GDDKQAKANNAKPPEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCN 386
GD+++ K N K V +R +A H+ +ER RR+KI++RMK LQ LVP +
Sbjct: 250 GDEEKKKRANGKS--------SVSTKRSRAAAIHNQSERKRRDKINQRMKTLQKLVPNSS 301
Query: 387 KVTGKALMLDEIINYVQSLQRQVEFL 412
K T KA MLDE+I Y++ LQ QV+ +
Sbjct: 302 K-TDKASMLDEVIEYLKQLQAQVQMM 326
>gi|289540888|gb|ADD09565.1| unknown [Trifolium repens]
Length = 290
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 34/64 (53%), Positives = 45/64 (70%), Gaps = 1/64 (1%)
Query: 350 RARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQV 409
RA RG ATD SL R RREKI+ER++ LQ+LVP KV + ML++ I+YV+ LQ Q+
Sbjct: 199 RANRGSATDPQSLYARKRREKINERLRTLQNLVPNGTKV-DISTMLEDAIHYVKFLQLQI 257
Query: 410 EFLS 413
+ LS
Sbjct: 258 KLLS 261
>gi|297745167|emb|CBI39159.3| unnamed protein product [Vitis vinifera]
Length = 410
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 51/76 (67%), Gaps = 2/76 (2%)
Query: 343 PKDYI--HVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIIN 400
P+D + VRA+RG AT S+AER RR +IS ++K LQDLVP +K T A MLD +
Sbjct: 324 PEDSVPCKVRAKRGCATHPRSIAERERRTRISGKLKKLQDLVPNMDKQTSYADMLDLAVQ 383
Query: 401 YVQSLQRQVEFLSMKL 416
+++ LQ +V+ L+ +L
Sbjct: 384 HIKGLQNEVQKLNKEL 399
>gi|449450231|ref|XP_004142867.1| PREDICTED: uncharacterized protein LOC101203008 [Cucumis sativus]
Length = 842
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 49/65 (75%), Gaps = 1/65 (1%)
Query: 351 ARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVE 410
++R ++ + H+++E+ RR +I+E+MK LQ+L+P NK T KA MLDE I Y++ LQ QV+
Sbjct: 192 SKRSRSAEVHNMSEKRRRRRINEKMKALQNLIPNSNK-TDKASMLDEAIEYLKQLQLQVQ 250
Query: 411 FLSMK 415
LSM+
Sbjct: 251 MLSMR 255
>gi|414868828|tpg|DAA47385.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 327
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 47/63 (74%), Gaps = 1/63 (1%)
Query: 351 ARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVE 410
+RR ++H+L E+ RR KI+ER+K LQ +VPGC+K + +A LD+ I+Y++SLQ QV+
Sbjct: 172 SRRSHHGEAHNLTEKRRRHKINERLKTLQQIVPGCSK-SNQASTLDQTIHYMKSLQHQVQ 230
Query: 411 FLS 413
+S
Sbjct: 231 AMS 233
>gi|224129878|ref|XP_002320693.1| predicted protein [Populus trichocarpa]
gi|222861466|gb|EEE99008.1| predicted protein [Populus trichocarpa]
Length = 343
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 36/83 (43%), Positives = 52/83 (62%), Gaps = 1/83 (1%)
Query: 328 DDKQAKANNAKPPEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNK 387
DD +K +++K E RA RG ATD SL R RRE+I+ER+K+LQ +VP K
Sbjct: 249 DDNASKDSDSKVSEVLSSSGKTRASRGAATDPQSLYARKRRERINERLKILQHIVPNGTK 308
Query: 388 VTGKALMLDEIINYVQSLQRQVE 410
V + ML+E ++YV+ LQ Q++
Sbjct: 309 V-DISTMLEEAVHYVKFLQLQIK 330
>gi|225458663|ref|XP_002284880.1| PREDICTED: transcription factor SPATULA [Vitis vinifera]
gi|302142294|emb|CBI19497.3| unnamed protein product [Vitis vinifera]
Length = 369
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 45/60 (75%), Gaps = 1/60 (1%)
Query: 356 ATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMK 415
A + H+L+E+ RR +I+E+MK LQ+L+P NK T KA MLDE I Y++ LQ QV+ L+M+
Sbjct: 188 AAEVHNLSEKRRRSRINEKMKALQNLIPNSNK-TDKASMLDEAIEYLKQLQLQVQMLTMR 246
>gi|125541527|gb|EAY87922.1| hypothetical protein OsI_09345 [Oryza sativa Indica Group]
Length = 320
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 32/66 (48%), Positives = 48/66 (72%), Gaps = 1/66 (1%)
Query: 350 RARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQV 409
R +R +A + H+L+E+ RR +I+E+MK LQ L+P +K T KA MLD+ I Y++ LQ QV
Sbjct: 49 RGKRSRAAEVHNLSEKRRRSRINEKMKALQSLIPNSSK-TDKASMLDDAIEYLKQLQLQV 107
Query: 410 EFLSMK 415
+ LSM+
Sbjct: 108 QMLSMR 113
>gi|125584067|gb|EAZ24998.1| hypothetical protein OsJ_08778 [Oryza sativa Japonica Group]
Length = 320
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 32/66 (48%), Positives = 48/66 (72%), Gaps = 1/66 (1%)
Query: 350 RARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQV 409
R +R +A + H+L+E+ RR +I+E+MK LQ L+P +K T KA MLD+ I Y++ LQ QV
Sbjct: 49 RGKRSRAAEVHNLSEKRRRSRINEKMKALQSLIPNSSK-TDKASMLDDAIEYLKQLQLQV 107
Query: 410 EFLSMK 415
+ LSM+
Sbjct: 108 QMLSMR 113
>gi|224131550|ref|XP_002321112.1| predicted protein [Populus trichocarpa]
gi|222861885|gb|EEE99427.1| predicted protein [Populus trichocarpa]
Length = 342
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 50/76 (65%), Gaps = 2/76 (2%)
Query: 343 PKDYI--HVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIIN 400
P+D + +RA+RG AT S+AER RR +IS ++K LQDLVP +K T A ML+ +
Sbjct: 255 PEDSVPCKIRAKRGCATHPRSIAERERRTRISGKLKTLQDLVPNMDKQTSYADMLELAVK 314
Query: 401 YVQSLQRQVEFLSMKL 416
+++ LQ +VE L +L
Sbjct: 315 HIKGLQNEVEKLHKEL 330
>gi|289540905|gb|ADD09579.1| unknown [Trifolium repens]
Length = 276
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 34/64 (53%), Positives = 45/64 (70%), Gaps = 1/64 (1%)
Query: 350 RARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQV 409
RA RG ATD SL R RREKI+ER++ LQ+LVP KV + ML++ I+YV+ LQ Q+
Sbjct: 185 RANRGSATDPQSLYARKRREKINERLRTLQNLVPNGTKV-DISTMLEDAIHYVKFLQLQI 243
Query: 410 EFLS 413
+ LS
Sbjct: 244 KLLS 247
>gi|413924221|gb|AFW64153.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 230
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 33/50 (66%), Positives = 41/50 (82%), Gaps = 1/50 (2%)
Query: 365 RVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSM 414
++RRE+I+ERMK LQ+LVP NK T KA MLDEII+YV+ LQ QV+ LSM
Sbjct: 140 QLRRERIAERMKALQELVPNANK-TDKASMLDEIIDYVKFLQLQVKVLSM 188
>gi|297814329|ref|XP_002875048.1| hypothetical protein ARALYDRAFT_912247 [Arabidopsis lyrata subsp.
lyrata]
gi|297320885|gb|EFH51307.1| hypothetical protein ARALYDRAFT_912247 [Arabidopsis lyrata subsp.
lyrata]
Length = 403
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 46/65 (70%), Gaps = 1/65 (1%)
Query: 349 VRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQ 408
V +R +A H+ +ER RR+KI++RMK+LQ LVP +K T KA MLDE+I Y++ LQ Q
Sbjct: 209 VSTKRSRAAAIHNQSERKRRDKINQRMKILQKLVPNSSK-TDKASMLDEVIEYLKQLQAQ 267
Query: 409 VEFLS 413
V +S
Sbjct: 268 VSMMS 272
>gi|242050734|ref|XP_002463111.1| hypothetical protein SORBIDRAFT_02g037990 [Sorghum bicolor]
gi|241926488|gb|EER99632.1| hypothetical protein SORBIDRAFT_02g037990 [Sorghum bicolor]
Length = 282
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 33/66 (50%), Positives = 44/66 (66%), Gaps = 1/66 (1%)
Query: 348 HVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQR 407
+ RA RG ATD SL R RRE+I+ER+++LQ LVP KV + ML+E YV+ LQ
Sbjct: 189 YTRASRGAATDPQSLYARKRRERINERLRILQKLVPNGTKV-DISTMLEEAAQYVKFLQL 247
Query: 408 QVEFLS 413
Q++ LS
Sbjct: 248 QIKLLS 253
>gi|302142209|emb|CBI19412.3| unnamed protein product [Vitis vinifera]
Length = 186
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 46/64 (71%), Gaps = 1/64 (1%)
Query: 350 RARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQV 409
RA RG ATD SL R RRE+I+ER+++LQ+LVP KV + ML+E ++YV+ LQ Q+
Sbjct: 94 RASRGSATDPQSLYARKRRERINERLRILQNLVPNGTKVD-ISTMLEEAVHYVKFLQLQI 152
Query: 410 EFLS 413
+ LS
Sbjct: 153 KLLS 156
>gi|116785394|gb|ABK23705.1| unknown [Picea sitchensis]
Length = 333
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 48/65 (73%), Gaps = 1/65 (1%)
Query: 351 ARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVE 410
++R +A + H+L+E+ RR +I+E+MK LQ+L+P NK T KA MLDE I Y++ LQ QV+
Sbjct: 152 SKRSRAAEVHNLSEKRRRNRINEKMKALQNLIPNSNK-TDKASMLDEAIEYLKKLQLQVQ 210
Query: 411 FLSMK 415
LS +
Sbjct: 211 MLSAR 215
>gi|334184893|ref|NP_001189738.1| transcription factor bHLH129 [Arabidopsis thaliana]
gi|330255120|gb|AEC10214.1| transcription factor bHLH129 [Arabidopsis thaliana]
Length = 309
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 35/72 (48%), Positives = 47/72 (65%), Gaps = 2/72 (2%)
Query: 343 PKDYIHVRAR--RGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIIN 400
P+D + RAR RG AT S+AER RR +IS ++K LQ+LVP +K T A MLD +
Sbjct: 223 PEDSVPCRARAKRGFATHPRSIAERERRTRISGKLKKLQELVPNMDKQTSYADMLDLAVE 282
Query: 401 YVQSLQRQVEFL 412
+++ LQ QVE L
Sbjct: 283 HIKGLQHQVESL 294
>gi|302759440|ref|XP_002963143.1| hypothetical protein SELMODRAFT_404767 [Selaginella moellendorffii]
gi|300170004|gb|EFJ36606.1| hypothetical protein SELMODRAFT_404767 [Selaginella moellendorffii]
Length = 302
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 35/64 (54%), Positives = 43/64 (67%), Gaps = 1/64 (1%)
Query: 350 RARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQV 409
RA+RG ATD S+ R RRE+I+ER+K LQ LVP KV ML+E I+YV+ LQ QV
Sbjct: 212 RAKRGSATDPQSVYARHRRERINERLKTLQHLVPNGAKV-DIVTMLEEAIHYVKFLQLQV 270
Query: 410 EFLS 413
LS
Sbjct: 271 NMLS 274
>gi|54306640|gb|AAV33474.1| basic helix-loop-helix protein [Fragaria x ananassa]
Length = 298
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 32/60 (53%), Positives = 45/60 (75%), Gaps = 1/60 (1%)
Query: 356 ATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMK 415
A + H+L+E+ RR +I+E+MK LQ+L+P NK T KA MLDE I Y++ LQ QV+ LSM+
Sbjct: 145 AAEVHNLSEKRRRSRINEKMKALQNLIPNSNK-TDKASMLDEAIEYLKQLQLQVQMLSMR 203
>gi|18396475|ref|NP_564293.1| transcription factor bHLH54 [Arabidopsis thaliana]
gi|75301354|sp|Q8LEG1.1|BH054_ARATH RecName: Full=Transcription factor bHLH54; AltName: Full=Basic
helix-loop-helix protein 54; Short=AtbHLH54; Short=bHLH
54; AltName: Full=Transcription factor EN 114; AltName:
Full=bHLH transcription factor bHLH054
gi|21553570|gb|AAM62663.1| unknown [Arabidopsis thaliana]
gi|225897974|dbj|BAH30319.1| hypothetical protein [Arabidopsis thaliana]
gi|332192750|gb|AEE30871.1| transcription factor bHLH54 [Arabidopsis thaliana]
Length = 258
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 38/86 (44%), Positives = 52/86 (60%), Gaps = 9/86 (10%)
Query: 328 DDKQAKANNAKPPEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNK 387
DD++A + K RA +G ATD SL R RREKI+ER+K LQ+LVP K
Sbjct: 154 DDEKASVTSVKGK--------TRATKGTATDPQSLYARKRREKINERLKTLQNLVPNGTK 205
Query: 388 VTGKALMLDEIINYVQSLQRQVEFLS 413
V + ML+E ++YV+ LQ Q++ LS
Sbjct: 206 V-DISTMLEEAVHYVKFLQLQIKLLS 230
>gi|168000336|ref|XP_001752872.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162696035|gb|EDQ82376.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 583
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/60 (53%), Positives = 41/60 (68%), Gaps = 1/60 (1%)
Query: 350 RARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQV 409
R +RG ATD S+ R RREKI+ER++ LQ L+P KV MLDE ++YVQ L+RQV
Sbjct: 448 RVQRGSATDPQSVHARARREKIAERLRKLQHLIPNGGKV-DIVTMLDEAVHYVQFLKRQV 506
>gi|30678541|ref|NP_191916.3| transcription factor UNE10 [Arabidopsis thaliana]
gi|75299638|sp|Q8GZ38.1|UNE10_ARATH RecName: Full=Transcription factor UNE10; AltName: Full=Basic
helix-loop-helix protein 16; Short=AtbHLH16; Short=bHLH
16; AltName: Full=Protein UNFERTILIZED EMBRYO SAC 10;
AltName: Full=Transcription factor EN 108; AltName:
Full=bHLH transcription factor bHLH016
gi|26449558|dbj|BAC41905.1| putative bHLH transcription factor bHLH016 [Arabidopsis thaliana]
gi|109134123|gb|ABG25060.1| At4g00050 [Arabidopsis thaliana]
gi|332656418|gb|AEE81818.1| transcription factor UNE10 [Arabidopsis thaliana]
Length = 399
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
Query: 349 VRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQ 408
V +R +A H+ +ER RR+KI++RMK LQ LVP +K T KA MLDE+I Y++ LQ Q
Sbjct: 207 VSTKRSRAAAIHNQSERKRRDKINQRMKTLQKLVPNSSK-TDKASMLDEVIEYLKQLQAQ 265
Query: 409 VEFLS 413
V +S
Sbjct: 266 VSMMS 270
>gi|302812823|ref|XP_002988098.1| hypothetical protein SELMODRAFT_426794 [Selaginella moellendorffii]
gi|300144204|gb|EFJ10890.1| hypothetical protein SELMODRAFT_426794 [Selaginella moellendorffii]
Length = 422
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/61 (54%), Positives = 44/61 (72%), Gaps = 1/61 (1%)
Query: 350 RARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQV 409
RAR+G A D S+A R RRE+IS+R+K+LQ+LVP KV ML++ INYV+ LQ QV
Sbjct: 359 RARQGSANDPQSIAARHRRERISDRLKILQELVPNSTKV-DLVTMLEKAINYVKFLQLQV 417
Query: 410 E 410
+
Sbjct: 418 K 418
>gi|20127012|gb|AAM10933.1|AF488561_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 399
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
Query: 349 VRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQ 408
V +R +A H+ +ER RR+KI++RMK LQ LVP +K T KA MLDE+I Y++ LQ Q
Sbjct: 207 VSTKRSRAAAIHNQSERKRRDKINQRMKTLQKLVPNSSK-TDKASMLDEVIEYLKQLQAQ 265
Query: 409 VEFLS 413
V +S
Sbjct: 266 VSMMS 270
>gi|357437591|ref|XP_003589071.1| Transcription factor bHLH85 [Medicago truncatula]
gi|357437635|ref|XP_003589093.1| Transcription factor bHLH85 [Medicago truncatula]
gi|355478119|gb|AES59322.1| Transcription factor bHLH85 [Medicago truncatula]
gi|355478141|gb|AES59344.1| Transcription factor bHLH85 [Medicago truncatula]
Length = 375
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/66 (48%), Positives = 46/66 (69%), Gaps = 1/66 (1%)
Query: 349 VRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQ 408
RA RG ATD SL R RRE+I+ER+++LQ+LVP KV + ML+E +NYV+ LQ Q
Sbjct: 274 TRASRGSATDPQSLYARKRRERINERLRVLQNLVPNGTKV-DISTMLEEAVNYVKFLQTQ 332
Query: 409 VEFLSM 414
++ ++
Sbjct: 333 IKVCTI 338
>gi|224060782|ref|XP_002300268.1| predicted protein [Populus trichocarpa]
gi|222847526|gb|EEE85073.1| predicted protein [Populus trichocarpa]
Length = 317
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
Query: 349 VRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQ 408
RA +G ATD SL R RRE+I+ER+++LQ+LVP KV + ML+E + YV+ LQ Q
Sbjct: 224 TRASKGAATDPQSLYARKRRERINERLRILQNLVPNGTKVD-ISTMLEEAVQYVKFLQLQ 282
Query: 409 VEFLS 413
++ LS
Sbjct: 283 IKLLS 287
>gi|356501827|ref|XP_003519725.1| PREDICTED: uncharacterized protein LOC100783804 [Glycine max]
Length = 852
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 62/105 (59%), Gaps = 14/105 (13%)
Query: 328 DDKQAKANNAKP-PEPPKDYIHVR-------ARRGQATDSHSLAERVRREKISERMKLLQ 379
DD Q K + E P+D + + +R + H+L ER RR+KI++RM++L+
Sbjct: 716 DDAQRKITVTQENDEEPEDVVKEKPAREGTGVKRSRNAQVHNLCERKRRDKINKRMRILK 775
Query: 380 DLVPGCNKVTGKALMLDEIINYVQSLQRQVE-----FLSMKLASV 419
+L+P CNK T KA MLD+ I Y+++L+ Q++ F S ++A V
Sbjct: 776 ELIPNCNK-TDKASMLDDAIEYLKTLKLQIQVNFKSFSSYQIAFV 819
>gi|145360933|ref|NP_181843.2| transcription factor bHLH129 [Arabidopsis thaliana]
gi|218563526|sp|Q9ZW81.2|BH129_ARATH RecName: Full=Transcription factor bHLH129; AltName: Full=Basic
helix-loop-helix protein 129; Short=AtbHLH129;
Short=bHLH 129; AltName: Full=Transcription factor EN
73; AltName: Full=bHLH transcription factor bHLH129
gi|330255119|gb|AEC10213.1| transcription factor bHLH129 [Arabidopsis thaliana]
Length = 297
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/70 (48%), Positives = 46/70 (65%), Gaps = 2/70 (2%)
Query: 343 PKDYIHVRAR--RGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIIN 400
P+D + RAR RG AT S+AER RR +IS ++K LQ+LVP +K T A MLD +
Sbjct: 225 PEDSVPCRARAKRGFATHPRSIAERERRTRISGKLKKLQELVPNMDKQTSYADMLDLAVE 284
Query: 401 YVQSLQRQVE 410
+++ LQ QVE
Sbjct: 285 HIKGLQHQVE 294
>gi|297744077|emb|CBI37047.3| unnamed protein product [Vitis vinifera]
Length = 200
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 50/64 (78%), Gaps = 1/64 (1%)
Query: 351 ARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVE 410
++R ++ + HSL+E+ RR++I+++M+ LQ+L+P C KV K +LDE I+Y+++LQ QV+
Sbjct: 10 SKRNRSAEGHSLSEKRRRDRINKKMRSLQELIPNCKKVD-KISILDEAIDYLKTLQLQVQ 68
Query: 411 FLSM 414
+SM
Sbjct: 69 VMSM 72
>gi|3763923|gb|AAC64303.1| hypothetical protein [Arabidopsis thaliana]
Length = 295
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/70 (48%), Positives = 46/70 (65%), Gaps = 2/70 (2%)
Query: 343 PKDYIHVRAR--RGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIIN 400
P+D + RAR RG AT S+AER RR +IS ++K LQ+LVP +K T A MLD +
Sbjct: 223 PEDSVPCRARAKRGFATHPRSIAERERRTRISGKLKKLQELVPNMDKQTSYADMLDLAVE 282
Query: 401 YVQSLQRQVE 410
+++ LQ QVE
Sbjct: 283 HIKGLQHQVE 292
>gi|414868827|tpg|DAA47384.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 339
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 46/63 (73%), Gaps = 1/63 (1%)
Query: 351 ARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVE 410
+RR ++H+L E+ RR KI+ER K LQ +VPGC+K + +A LD+ I+Y++SLQ QV+
Sbjct: 175 SRRSHHGEAHNLTEKRRRHKINERFKTLQQIVPGCSK-SNQASTLDQTIHYMKSLQHQVQ 233
Query: 411 FLS 413
+S
Sbjct: 234 AMS 236
>gi|357445143|ref|XP_003592849.1| Transcription factor bHLH128 [Medicago truncatula]
gi|355481897|gb|AES63100.1| Transcription factor bHLH128 [Medicago truncatula]
Length = 343
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 49/76 (64%), Gaps = 2/76 (2%)
Query: 343 PKDYI--HVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIIN 400
P+D + +RA+RG AT S+AER RR +IS ++K LQDLVP +K T + MLD +
Sbjct: 257 PQDSVPCKIRAKRGCATHPRSIAERERRTRISGKLKKLQDLVPNMDKQTSYSDMLDLAVQ 316
Query: 401 YVQSLQRQVEFLSMKL 416
+++ LQ QV+ L L
Sbjct: 317 HIKGLQTQVQKLHEDL 332
>gi|297798162|ref|XP_002866965.1| hypothetical protein ARALYDRAFT_353119 [Arabidopsis lyrata subsp.
lyrata]
gi|297312801|gb|EFH43224.1| hypothetical protein ARALYDRAFT_353119 [Arabidopsis lyrata subsp.
lyrata]
Length = 354
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/61 (50%), Positives = 45/61 (73%), Gaps = 1/61 (1%)
Query: 355 QATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSM 414
+A + H+L+E+ RR +I+E+MK LQ L+P NK T KA MLDE I Y++ LQ QV+ L+M
Sbjct: 176 RAAEVHNLSEKRRRSRINEKMKALQSLIPNSNK-TDKASMLDEAIEYLKQLQLQVQMLTM 234
Query: 415 K 415
+
Sbjct: 235 R 235
>gi|224065030|ref|XP_002301638.1| predicted protein [Populus trichocarpa]
gi|222843364|gb|EEE80911.1| predicted protein [Populus trichocarpa]
Length = 155
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 52/84 (61%), Gaps = 2/84 (2%)
Query: 343 PKDYI--HVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIIN 400
P+D + +RA+RG AT S+AER RR +IS ++K LQDLVP +K T A MLD +
Sbjct: 69 PEDSVPCKIRAKRGFATHPRSIAERERRTRISGKLKKLQDLVPNMDKQTSYADMLDFAVQ 128
Query: 401 YVQSLQRQVEFLSMKLASVNTRLE 424
+++ LQ +VE L ++ + E
Sbjct: 129 HIKGLQNEVEKLHKEMENCTCGCE 152
>gi|297828011|ref|XP_002881888.1| hypothetical protein ARALYDRAFT_483415 [Arabidopsis lyrata subsp.
lyrata]
gi|297327727|gb|EFH58147.1| hypothetical protein ARALYDRAFT_483415 [Arabidopsis lyrata subsp.
lyrata]
Length = 297
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/70 (47%), Positives = 46/70 (65%), Gaps = 2/70 (2%)
Query: 343 PKDYI--HVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIIN 400
P+D + RA+RG AT S+AER RR +IS ++K LQ+LVP +K T A MLD +
Sbjct: 225 PEDSVPCKARAKRGFATHPRSIAERERRTRISGKLKKLQELVPNMDKQTSYADMLDLAVE 284
Query: 401 YVQSLQRQVE 410
+++ LQ QVE
Sbjct: 285 HIKGLQHQVE 294
>gi|168024155|ref|XP_001764602.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684180|gb|EDQ70584.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 801
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 48/64 (75%), Gaps = 1/64 (1%)
Query: 352 RRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEF 411
+R +A + H+ +ER RR++I+E+M+ LQ+L+P NK T KA MLDE I Y++ LQ Q++
Sbjct: 592 KRSRAAEVHNQSERRRRDRINEKMRALQELIPNSNK-TDKASMLDEAIEYLKMLQLQLQM 650
Query: 412 LSMK 415
+S++
Sbjct: 651 MSIR 654
>gi|302805681|ref|XP_002984591.1| hypothetical protein SELMODRAFT_29179 [Selaginella moellendorffii]
gi|300147573|gb|EFJ14236.1| hypothetical protein SELMODRAFT_29179 [Selaginella moellendorffii]
Length = 64
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 47/62 (75%), Gaps = 1/62 (1%)
Query: 351 ARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVE 410
++R +A + H+L+ER RR++I+ERMK LQ+L+P NK T KA MLDE I Y++ LQ Q++
Sbjct: 4 SKRSRAAEVHNLSERKRRDRINERMKALQELIPNSNK-TDKASMLDEAIEYLKLLQHQLQ 62
Query: 411 FL 412
+
Sbjct: 63 VV 64
>gi|218187187|gb|EEC69614.1| hypothetical protein OsI_38988 [Oryza sativa Indica Group]
Length = 271
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/66 (50%), Positives = 47/66 (71%), Gaps = 1/66 (1%)
Query: 350 RARRG-QATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQ 408
RARR + + +HSL ER RR KI+E +K LQ LVPGC+K +A LD+ I Y++SLQ+
Sbjct: 112 RARRSSRYSQTHSLTERKRRCKINENLKTLQQLVPGCDKSNNQASTLDKTIRYMKSLQQH 171
Query: 409 VEFLSM 414
V+ +S+
Sbjct: 172 VQAMSV 177
>gi|255547289|ref|XP_002514702.1| DNA binding protein, putative [Ricinus communis]
gi|223546306|gb|EEF47808.1| DNA binding protein, putative [Ricinus communis]
Length = 440
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 48/65 (73%), Gaps = 1/65 (1%)
Query: 351 ARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVE 410
+RR +A H+ +ER RR++I+++MK LQ LVP +K T KA MLDE+I Y++ LQ QV+
Sbjct: 243 SRRTRAAAVHNQSERRRRDRINQKMKALQKLVPNASK-TDKASMLDEVIEYLKQLQAQVQ 301
Query: 411 FLSMK 415
+S++
Sbjct: 302 AMSVR 306
>gi|18419937|ref|NP_568010.1| transcription factor SPATULA [Arabidopsis thaliana]
gi|75309699|sp|Q9FUA4.1|SPT_ARATH RecName: Full=Transcription factor SPATULA; AltName: Full=Basic
helix-loop-helix protein 24; Short=AtbHLH24; Short=bHLH
24; AltName: Full=Transcription factor EN 99; AltName:
Full=bHLH transcription factor bHLH024
gi|11245494|gb|AAG33640.1|AF319540_1 SPATULA [Arabidopsis thaliana]
gi|110738410|dbj|BAF01131.1| putative bHLH transcription factor (AtbHLH024) / SPATULA (SPT)
[Arabidopsis thaliana]
gi|111074392|gb|ABH04569.1| At4g36930 [Arabidopsis thaliana]
gi|332661320|gb|AEE86720.1| transcription factor SPATULA [Arabidopsis thaliana]
Length = 373
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/61 (50%), Positives = 45/61 (73%), Gaps = 1/61 (1%)
Query: 355 QATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSM 414
+A + H+L+E+ RR +I+E+MK LQ L+P NK T KA MLDE I Y++ LQ QV+ L+M
Sbjct: 197 RAAEVHNLSEKRRRSRINEKMKALQSLIPNSNK-TDKASMLDEAIEYLKQLQLQVQMLTM 255
Query: 415 K 415
+
Sbjct: 256 R 256
>gi|356541789|ref|XP_003539355.1| PREDICTED: transcription factor SPATULA-like [Glycine max]
Length = 381
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/56 (55%), Positives = 43/56 (76%), Gaps = 1/56 (1%)
Query: 360 HSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMK 415
H+L+E+ RR +I+E+MK LQ+L+P NK T KA MLDE I Y++ LQ QV+ LSM+
Sbjct: 145 HNLSEKRRRGRINEKMKALQNLIPNSNK-TDKASMLDEAIEYLKQLQLQVQMLSMR 199
>gi|21554238|gb|AAM63313.1| Contains similarity to bHLH transcription factor GBOF-1 from Tulipa
gesneriana gb|AF185269 [Arabidopsis thaliana]
Length = 362
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/72 (44%), Positives = 48/72 (66%), Gaps = 2/72 (2%)
Query: 343 PKDYI--HVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIIN 400
P+D + +RA+RG AT S+AER RR +IS ++K LQDLVP +K T + MLD +
Sbjct: 275 PEDSVPCKIRAKRGCATHPRSIAERERRTRISGKLKKLQDLVPNMDKQTSYSDMLDLAVQ 334
Query: 401 YVQSLQRQVEFL 412
+++ LQ Q++ L
Sbjct: 335 HIKGLQHQLQNL 346
>gi|18390573|ref|NP_563749.1| transcription factor bHLH128 [Arabidopsis thaliana]
gi|75299737|sp|Q8H102.1|BH128_ARATH RecName: Full=Transcription factor bHLH128; AltName: Full=Basic
helix-loop-helix protein 128; Short=AtbHLH128;
Short=bHLH 128; AltName: Full=Transcription factor EN
74; AltName: Full=bHLH transcription factor bHLH128
gi|24030386|gb|AAN41354.1| unknown protein [Arabidopsis thaliana]
gi|332189775|gb|AEE27896.1| transcription factor bHLH128 [Arabidopsis thaliana]
Length = 362
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/72 (44%), Positives = 48/72 (66%), Gaps = 2/72 (2%)
Query: 343 PKDYI--HVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIIN 400
P+D + +RA+RG AT S+AER RR +IS ++K LQDLVP +K T + MLD +
Sbjct: 275 PEDSVPCKIRAKRGCATHPRSIAERERRTRISGKLKKLQDLVPNMDKQTSYSDMLDLAVQ 334
Query: 401 YVQSLQRQVEFL 412
+++ LQ Q++ L
Sbjct: 335 HIKGLQHQLQNL 346
>gi|449521074|ref|XP_004167556.1| PREDICTED: transcription factor bHLH128-like [Cucumis sativus]
Length = 356
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 48/72 (66%), Gaps = 2/72 (2%)
Query: 343 PKDYI--HVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIIN 400
P+D + +RA+RG AT S+AER RR +IS ++K LQ+LVP +K T + MLD +
Sbjct: 284 PEDSVPCKIRAKRGCATHPRSIAERERRTRISGKLKKLQELVPNMDKQTSYSDMLDLAVQ 343
Query: 401 YVQSLQRQVEFL 412
+++ LQ Q++ L
Sbjct: 344 HIKGLQNQIQVL 355
>gi|356495472|ref|XP_003516601.1| PREDICTED: transcription factor SPATULA-like [Glycine max]
Length = 375
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/56 (55%), Positives = 43/56 (76%), Gaps = 1/56 (1%)
Query: 360 HSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMK 415
H+L+E+ RR +I+E+MK LQ+L+P NK T KA MLDE I Y++ LQ QV+ LSM+
Sbjct: 149 HNLSEKRRRSRINEKMKALQNLIPNSNK-TDKASMLDEAIEYLKQLQLQVQMLSMR 203
>gi|302767438|ref|XP_002967139.1| hypothetical protein SELMODRAFT_86848 [Selaginella moellendorffii]
gi|300165130|gb|EFJ31738.1| hypothetical protein SELMODRAFT_86848 [Selaginella moellendorffii]
Length = 110
Score = 63.5 bits (153), Expect = 2e-07, Method: Composition-based stats.
Identities = 32/62 (51%), Positives = 43/62 (69%)
Query: 349 VRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQ 408
+RARRG AT S+AERVRR KISE +K L DLVP +K T A ML+ + Y++ L+ +
Sbjct: 44 LRARRGCATHPRSVAERVRRTKISEGIKRLHDLVPNMDKQTNTADMLNHAMEYMKQLKEK 103
Query: 409 VE 410
+E
Sbjct: 104 IE 105
>gi|302793783|ref|XP_002978656.1| hypothetical protein SELMODRAFT_39143 [Selaginella moellendorffii]
gi|300153465|gb|EFJ20103.1| hypothetical protein SELMODRAFT_39143 [Selaginella moellendorffii]
Length = 66
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 47/62 (75%), Gaps = 1/62 (1%)
Query: 351 ARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVE 410
++R +A + H+L+ER RR++I+ERMK LQ+L+P NK T KA MLDE I Y++ LQ Q++
Sbjct: 4 SKRSRAAEVHNLSERKRRDRINERMKALQELIPNSNK-TDKASMLDEAIEYLKLLQHQLQ 62
Query: 411 FL 412
+
Sbjct: 63 VV 64
>gi|312282787|dbj|BAJ34259.1| unnamed protein product [Thellungiella halophila]
Length = 353
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/72 (44%), Positives = 48/72 (66%), Gaps = 2/72 (2%)
Query: 343 PKDYI--HVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIIN 400
P+D + +RA+RG AT S+AER RR +IS ++K LQDLVP +K T + MLD +
Sbjct: 266 PEDSVPCKIRAKRGCATHPRSIAERERRTRISGKLKKLQDLVPNMDKQTSYSDMLDLAVQ 325
Query: 401 YVQSLQRQVEFL 412
+++ LQ Q++ L
Sbjct: 326 HIKGLQHQLQNL 337
>gi|297843372|ref|XP_002889567.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297335409|gb|EFH65826.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 357
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/72 (44%), Positives = 48/72 (66%), Gaps = 2/72 (2%)
Query: 343 PKDYI--HVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIIN 400
P+D + +RA+RG AT S+AER RR +IS ++K LQDLVP +K T + MLD +
Sbjct: 270 PEDSVPCKIRAKRGCATHPRSIAERERRTRISGKLKKLQDLVPNMDKQTSYSDMLDLAVQ 329
Query: 401 YVQSLQRQVEFL 412
+++ LQ Q++ L
Sbjct: 330 HIKGLQHQLQNL 341
>gi|224137582|ref|XP_002327162.1| predicted protein [Populus trichocarpa]
gi|222835477|gb|EEE73912.1| predicted protein [Populus trichocarpa]
Length = 310
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/97 (38%), Positives = 57/97 (58%), Gaps = 1/97 (1%)
Query: 319 GAVKAEDEGDDKQAKANNAKPPEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKLL 378
G V ED+ D + + ++R +A + H+L+E+ RR +I+E+MK L
Sbjct: 87 GGVSVEDDLGDFSCDSEKGVEVQANTARPRSSSKRSRAAEVHNLSEKRRRSRINEKMKAL 146
Query: 379 QDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMK 415
Q+L+P NK T KA MLDE I Y++ LQ QV+ L+M+
Sbjct: 147 QNLIPNSNK-TDKASMLDEAIEYLKQLQLQVQMLTMR 182
>gi|4006880|emb|CAB16798.1| putative protein [Arabidopsis thaliana]
gi|7270642|emb|CAB80359.1| putative protein [Arabidopsis thaliana]
Length = 415
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/61 (50%), Positives = 45/61 (73%), Gaps = 1/61 (1%)
Query: 355 QATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSM 414
+A + H+L+E+ RR +I+E+MK LQ L+P NK T KA MLDE I Y++ LQ QV+ L+M
Sbjct: 197 RAAEVHNLSEKRRRSRINEKMKALQSLIPNSNK-TDKASMLDEAIEYLKQLQLQVQMLTM 255
Query: 415 K 415
+
Sbjct: 256 R 256
>gi|414873438|tpg|DAA51995.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 146
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/65 (56%), Positives = 45/65 (69%), Gaps = 5/65 (7%)
Query: 306 KRCKPNEGKANGNGAVKAEDEGDDK---QAKANNAKPPEPPK-DYIHVRARRGQATDSHS 361
KR K N+ +N G+++ E E D + +A + N EPPK DYIHVRARRGQATDSHS
Sbjct: 80 KRSKTNK-SSNNKGSLRTEVETDSRSAGKAVSKNIPAAEPPKQDYIHVRARRGQATDSHS 138
Query: 362 LAERV 366
LAERV
Sbjct: 139 LAERV 143
>gi|115459116|ref|NP_001053158.1| Os04g0489600 [Oryza sativa Japonica Group]
gi|113564729|dbj|BAF15072.1| Os04g0489600 [Oryza sativa Japonica Group]
gi|215695534|dbj|BAG90725.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218195100|gb|EEC77527.1| hypothetical protein OsI_16412 [Oryza sativa Indica Group]
Length = 369
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 45/66 (68%)
Query: 347 IHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQ 406
VRA+RG AT S+AER RR +ISE+++ LQ LVP +K T + MLD +++++ LQ
Sbjct: 283 FRVRAKRGCATHPRSIAERERRTRISEKLRKLQALVPNMDKQTSTSDMLDLAVDHIKGLQ 342
Query: 407 RQVEFL 412
Q++ L
Sbjct: 343 SQLQTL 348
>gi|414887375|tpg|DAA63389.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 472
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 44/64 (68%), Gaps = 1/64 (1%)
Query: 350 RARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQV 409
RA RG ATD SL R RRE+I+ER+++LQ+LVP KV + ML+E YV+ LQ Q+
Sbjct: 197 RASRGGATDPQSLYARKRRERINERLRILQNLVPNGTKV-DISTMLEEAAQYVKFLQLQI 255
Query: 410 EFLS 413
+ LS
Sbjct: 256 KLLS 259
>gi|357511681|ref|XP_003626129.1| Transcription factor PIF3 [Medicago truncatula]
gi|355501144|gb|AES82347.1| Transcription factor PIF3 [Medicago truncatula]
Length = 682
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 51/64 (79%), Gaps = 1/64 (1%)
Query: 351 ARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVE 410
+++ ++T+ H+L+ER RR++I+ERM+ LQ+L+P CNK KA MLDE I Y++SLQ Q++
Sbjct: 425 SKKNRSTEVHNLSERRRRDRINERMRALQELIPNCNKA-DKASMLDEAIEYLKSLQLQLQ 483
Query: 411 FLSM 414
+SM
Sbjct: 484 IMSM 487
>gi|302784756|ref|XP_002974150.1| hypothetical protein SELMODRAFT_414414 [Selaginella moellendorffii]
gi|300158482|gb|EFJ25105.1| hypothetical protein SELMODRAFT_414414 [Selaginella moellendorffii]
Length = 499
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/63 (50%), Positives = 46/63 (73%), Gaps = 1/63 (1%)
Query: 350 RARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQV 409
RA++G A D S+A R RRE+IS+R+K+LQ+L+P +KV ML++ INYV+ LQ QV
Sbjct: 409 RAKQGCANDPQSIAARQRRERISDRLKILQELIPNGSKVD-LVTMLEKAINYVKFLQLQV 467
Query: 410 EFL 412
+ L
Sbjct: 468 KVL 470
>gi|302770807|ref|XP_002968822.1| hypothetical protein SELMODRAFT_409967 [Selaginella moellendorffii]
gi|300163327|gb|EFJ29938.1| hypothetical protein SELMODRAFT_409967 [Selaginella moellendorffii]
Length = 499
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/63 (50%), Positives = 46/63 (73%), Gaps = 1/63 (1%)
Query: 350 RARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQV 409
RA++G A D S+A R RRE+IS+R+K+LQ+L+P +KV ML++ INYV+ LQ QV
Sbjct: 409 RAKQGCANDPQSIAARQRRERISDRLKILQELIPNGSKVD-LVTMLEKAINYVKFLQLQV 467
Query: 410 EFL 412
+ L
Sbjct: 468 KVL 470
>gi|168023762|ref|XP_001764406.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684270|gb|EDQ70673.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1015
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 49/64 (76%), Gaps = 1/64 (1%)
Query: 352 RRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEF 411
+R +A + H+ +ER RR++I+E+M+ LQ+L+P NK T KA MLDE I+Y++ LQ Q++
Sbjct: 731 KRSRAAEVHNQSERRRRDRINEKMRALQELIPNSNK-TDKASMLDEAIDYLKILQLQLQM 789
Query: 412 LSMK 415
+S++
Sbjct: 790 MSIR 793
>gi|356501423|ref|XP_003519524.1| PREDICTED: transcription factor PIF4-like [Glycine max]
Length = 562
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 47/64 (73%), Gaps = 1/64 (1%)
Query: 351 ARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVE 410
+RR +A + H+ +ER RR++I+E+M+ LQ L+P NK T KA ML+E I Y++SLQ Q++
Sbjct: 356 SRRNRAAEVHNQSERRRRDRINEKMRTLQQLIPNSNK-TDKASMLEEAIEYLKSLQFQLQ 414
Query: 411 FLSM 414
+ M
Sbjct: 415 VMWM 418
>gi|302754898|ref|XP_002960873.1| hypothetical protein SELMODRAFT_402301 [Selaginella moellendorffii]
gi|300171812|gb|EFJ38412.1| hypothetical protein SELMODRAFT_402301 [Selaginella moellendorffii]
Length = 638
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/68 (48%), Positives = 46/68 (67%)
Query: 349 VRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQ 408
+RARRG AT S+AERVRR KISE +K L DLVP +K T A ML+ + Y++ L+ +
Sbjct: 557 LRARRGCATHPRSVAERVRRTKISEGIKRLHDLVPNMDKQTNTADMLNHAMEYMKQLKEK 616
Query: 409 VEFLSMKL 416
+E + +L
Sbjct: 617 IEQMKEEL 624
>gi|356495899|ref|XP_003516808.1| PREDICTED: transcription factor UNE10-like [Glycine max]
Length = 458
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 54/89 (60%), Gaps = 12/89 (13%)
Query: 324 EDEGDDKQAKANNAKPPEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVP 383
+DEG K+A ++ V +R +A H+ +ER RR+KI++RMK LQ LVP
Sbjct: 250 QDEGKKKRANGKSS-----------VSTKRSRAAAIHNQSERKRRDKINQRMKTLQKLVP 298
Query: 384 GCNKVTGKALMLDEIINYVQSLQRQVEFL 412
+K + KA MLDE+I Y++ LQ Q++ +
Sbjct: 299 NSSK-SDKASMLDEVIEYLKQLQAQLQMI 326
>gi|218191124|gb|EEC73551.1| hypothetical protein OsI_07971 [Oryza sativa Indica Group]
Length = 217
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 45/64 (70%)
Query: 349 VRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQ 408
VRA+RG AT S+AER RR +ISE+++ LQ+LVP +K T A MLD + +++ LQ Q
Sbjct: 141 VRAKRGCATHPRSIAERERRTRISEKLRKLQELVPNMDKQTSTADMLDLAVEHIKGLQSQ 200
Query: 409 VEFL 412
++ L
Sbjct: 201 LQAL 204
>gi|413932893|gb|AFW67444.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 387
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 46/72 (63%), Gaps = 1/72 (1%)
Query: 343 PKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYV 402
P D +HV R+G D RR++I E+M+ LQ+L+P CNK T KA +LDE I Y+
Sbjct: 177 PSDSVHVHKRKGMCRDESDSRSERRRDRIKEKMRALQELIPHCNK-TDKASILDETIEYL 235
Query: 403 QSLQRQVEFLSM 414
+SLQ QV+ + M
Sbjct: 236 KSLQMQVQIMWM 247
>gi|302793827|ref|XP_002978678.1| hypothetical protein SELMODRAFT_418491 [Selaginella moellendorffii]
gi|300153487|gb|EFJ20125.1| hypothetical protein SELMODRAFT_418491 [Selaginella moellendorffii]
Length = 298
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/61 (50%), Positives = 45/61 (73%), Gaps = 1/61 (1%)
Query: 350 RARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQV 409
R+R+G A D S+A R RRE+IS+R+K+LQDLVP +KV ML++ INYV+ +Q Q+
Sbjct: 234 RSRQGTANDPQSIAARQRRERISQRLKILQDLVPNGSKV-DLVTMLEKAINYVKFMQLQL 292
Query: 410 E 410
+
Sbjct: 293 Q 293
>gi|87241328|gb|ABD33186.1| Helix-loop-helix DNA-binding [Medicago truncatula]
Length = 689
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/70 (47%), Positives = 52/70 (74%), Gaps = 6/70 (8%)
Query: 351 ARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKV------TGKALMLDEIINYVQS 404
+++ ++T+ H+L+ER RR++I+ERM+ LQ+L+P CNKV KA MLDE I Y++S
Sbjct: 425 SKKNRSTEVHNLSERRRRDRINERMRALQELIPNCNKVDLFFLQADKASMLDEAIEYLKS 484
Query: 405 LQRQVEFLSM 414
LQ Q++ +SM
Sbjct: 485 LQLQLQIMSM 494
>gi|302805717|ref|XP_002984609.1| hypothetical protein SELMODRAFT_423809 [Selaginella moellendorffii]
gi|300147591|gb|EFJ14254.1| hypothetical protein SELMODRAFT_423809 [Selaginella moellendorffii]
Length = 298
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/61 (50%), Positives = 45/61 (73%), Gaps = 1/61 (1%)
Query: 350 RARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQV 409
R+R+G A D S+A R RRE+IS+R+K+LQDLVP +KV ML++ INYV+ +Q Q+
Sbjct: 234 RSRQGTANDPQSIAARQRRERISQRLKILQDLVPNGSKV-DLVTMLEKAINYVKFMQLQL 292
Query: 410 E 410
+
Sbjct: 293 Q 293
>gi|356536570|ref|XP_003536810.1| PREDICTED: transcription factor UNE12-like [Glycine max]
Length = 283
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/61 (62%), Positives = 51/61 (83%), Gaps = 1/61 (1%)
Query: 354 GQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLS 413
GQATD HS+AER+RRE+I+ER++ LQ+LVP NK T +A MLDEI++YV+ L+ QV+ LS
Sbjct: 127 GQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRLQVKVLS 185
Query: 414 M 414
M
Sbjct: 186 M 186
>gi|242062246|ref|XP_002452412.1| hypothetical protein SORBIDRAFT_04g025260 [Sorghum bicolor]
gi|241932243|gb|EES05388.1| hypothetical protein SORBIDRAFT_04g025260 [Sorghum bicolor]
Length = 338
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 45/64 (70%)
Query: 349 VRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQ 408
VRA+RG AT S+AER RR +ISE+++ LQDLVP +K T A MLD + +++ LQ +
Sbjct: 262 VRAKRGCATHPRSIAERERRTRISEKLRKLQDLVPNMDKQTSTADMLDLAVEHIKGLQSE 321
Query: 409 VEFL 412
++ L
Sbjct: 322 LQAL 325
>gi|356574311|ref|XP_003555292.1| PREDICTED: transcription factor bHLH85-like [Glycine max]
Length = 358
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 47/77 (61%), Gaps = 1/77 (1%)
Query: 337 AKPPEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLD 396
+K P PP RA A D SL R RRE+I+ER+++LQ+LVP KV + ML+
Sbjct: 252 SKDPAPPNLDRKSRATTSAAADPQSLYARKRRERINERLRILQNLVPNGTKV-DISTMLE 310
Query: 397 EIINYVQSLQRQVEFLS 413
E + YV+ LQ Q++ LS
Sbjct: 311 EAVQYVKFLQLQIKLLS 327
>gi|357482855|ref|XP_003611714.1| Transcription factor SPATULA [Medicago truncatula]
gi|355513049|gb|AES94672.1| Transcription factor SPATULA [Medicago truncatula]
Length = 344
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/56 (53%), Positives = 43/56 (76%), Gaps = 1/56 (1%)
Query: 360 HSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMK 415
H+L+E+ RR +I+E+MK LQ+L+P NK T KA MLDE I Y++ LQ QV+ LS++
Sbjct: 116 HNLSEKRRRSRINEKMKALQNLIPNSNK-TDKASMLDEAIEYLKQLQLQVQMLSLR 170
>gi|297820750|ref|XP_002878258.1| phytochrome-interacting factor 5 [Arabidopsis lyrata subsp. lyrata]
gi|297324096|gb|EFH54517.1| phytochrome-interacting factor 5 [Arabidopsis lyrata subsp. lyrata]
Length = 439
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 50/64 (78%), Gaps = 1/64 (1%)
Query: 351 ARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVE 410
RR +A + H+L+ER RR++I+ERMK LQ+L+P C+K T KA +LDE I+Y++SLQ Q++
Sbjct: 250 TRRSRAAEVHNLSERRRRDRINERMKALQELIPHCSK-TDKASILDEAIDYLKSLQMQLQ 308
Query: 411 FLSM 414
+ M
Sbjct: 309 VMWM 312
>gi|224094310|ref|XP_002310136.1| predicted protein [Populus trichocarpa]
gi|222853039|gb|EEE90586.1| predicted protein [Populus trichocarpa]
Length = 239
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/64 (53%), Positives = 46/64 (71%), Gaps = 3/64 (4%)
Query: 358 DSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMKLA 417
D S+A R RRE+ISERM++LQ LVPG K+ A MLDE I+YV+ L++QV+ S++ A
Sbjct: 166 DPQSVAARHRRERISERMRILQRLVPGGTKM-DTASMLDEAIHYVKFLKKQVQ--SLEQA 222
Query: 418 SVNT 421
NT
Sbjct: 223 GANT 226
>gi|449468734|ref|XP_004152076.1| PREDICTED: transcription factor bHLH128-like [Cucumis sativus]
Length = 370
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 48/72 (66%), Gaps = 2/72 (2%)
Query: 343 PKDYI--HVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIIN 400
P+D + +RA+RG AT S+AER RR +IS ++K LQ+LVP +K T + MLD +
Sbjct: 284 PEDSVPCKIRAKRGCATHPRSIAERERRTRISGKLKKLQELVPNMDKQTSYSDMLDLAVQ 343
Query: 401 YVQSLQRQVEFL 412
+++ LQ Q++ L
Sbjct: 344 HIKGLQNQIQKL 355
>gi|224081688|ref|XP_002306475.1| predicted protein [Populus trichocarpa]
gi|222855924|gb|EEE93471.1| predicted protein [Populus trichocarpa]
Length = 220
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 54/80 (67%), Gaps = 6/80 (7%)
Query: 340 PEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEII 399
P PP+ ++R +A + H+L+E+ RR +I+E+MK LQ+L+P +K T KA MLDE I
Sbjct: 128 PAPPRS-----SKRTRAAEVHNLSEKRRRSRINEKMKALQNLIPNSSK-TDKASMLDEAI 181
Query: 400 NYVQSLQRQVEFLSMKLASV 419
Y++ LQ QV+ LS++ +
Sbjct: 182 EYLKLLQLQVQGLSVRFLEI 201
>gi|388517319|gb|AFK46721.1| unknown [Medicago truncatula]
Length = 373
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 47/58 (81%), Gaps = 1/58 (1%)
Query: 360 HSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMKLA 417
H+L+ER RR+KI+E+++ L++L+P CNK+ KA MLD+ I+Y+++L+ Q++ +SM A
Sbjct: 213 HNLSERKRRDKINEKIRALKELIPNCNKM-DKASMLDDAIDYLKTLKLQLQIMSMGRA 269
>gi|357511583|ref|XP_003626080.1| Transcription factor SPATULA [Medicago truncatula]
gi|355501095|gb|AES82298.1| Transcription factor SPATULA [Medicago truncatula]
Length = 373
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 47/58 (81%), Gaps = 1/58 (1%)
Query: 360 HSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMKLA 417
H+L+ER RR+KI+E+++ L++L+P CNK+ KA MLD+ I+Y+++L+ Q++ +SM A
Sbjct: 213 HNLSERKRRDKINEKIRALKELIPNCNKM-DKASMLDDAIDYLKTLKLQLQIMSMGRA 269
>gi|357142794|ref|XP_003572696.1| PREDICTED: transcription factor bHLH128-like [Brachypodium
distachyon]
Length = 317
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 45/64 (70%)
Query: 349 VRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQ 408
VRA+RG AT S+AER RR +ISE+++ LQDLVP +K T + MLD + +++ LQ Q
Sbjct: 241 VRAKRGCATHPRSIAERERRTRISEKLRKLQDLVPNMDKQTSTSDMLDLAVEHIKGLQSQ 300
Query: 409 VEFL 412
++ +
Sbjct: 301 LQAM 304
>gi|38345229|emb|CAE01659.2| OSJNBa0084K20.3 [Oryza sativa Japonica Group]
gi|38347437|emb|CAE02480.2| OSJNBa0076N16.1 [Oryza sativa Japonica Group]
gi|222629103|gb|EEE61235.1| hypothetical protein OsJ_15277 [Oryza sativa Japonica Group]
Length = 218
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 45/64 (70%)
Query: 349 VRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQ 408
VRA+RG AT S+AER RR +ISE+++ LQ LVP +K T + MLD +++++ LQ Q
Sbjct: 134 VRAKRGCATHPRSIAERERRTRISEKLRKLQALVPNMDKQTSTSDMLDLAVDHIKGLQSQ 193
Query: 409 VEFL 412
++ L
Sbjct: 194 LQTL 197
>gi|312283297|dbj|BAJ34514.1| unnamed protein product [Thellungiella halophila]
Length = 448
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 50/64 (78%), Gaps = 1/64 (1%)
Query: 351 ARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVE 410
RR +A + H+L+ER RR++I+ERMK LQ+L+P C+K T KA +LDE I+Y++SLQ Q++
Sbjct: 256 TRRSRAAEVHNLSERRRRDRINERMKALQELIPHCSK-TDKASILDEAIDYLKSLQMQLQ 314
Query: 411 FLSM 414
+ M
Sbjct: 315 VMWM 318
>gi|356553623|ref|XP_003545154.1| PREDICTED: transcription factor PIF5-like [Glycine max]
Length = 562
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 47/64 (73%), Gaps = 1/64 (1%)
Query: 351 ARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVE 410
++R +A + H+ +ER RR++I+E+M+ LQ L+P NK T KA ML+E I Y++SLQ Q++
Sbjct: 356 SKRNRAAEVHNQSERRRRDRINEKMRTLQQLIPNSNK-TDKASMLEEAIEYLKSLQFQLQ 414
Query: 411 FLSM 414
+ M
Sbjct: 415 VMWM 418
>gi|297824267|ref|XP_002880016.1| hypothetical protein ARALYDRAFT_483401 [Arabidopsis lyrata subsp.
lyrata]
gi|297325855|gb|EFH56275.1| hypothetical protein ARALYDRAFT_483401 [Arabidopsis lyrata subsp.
lyrata]
Length = 422
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 33/63 (52%), Positives = 50/63 (79%), Gaps = 1/63 (1%)
Query: 352 RRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEF 411
RR +A + H+L+ER RR++I+ERMK LQ+L+P C+K T KA +LDE I+Y++SLQ Q++
Sbjct: 253 RRSRAAEVHNLSERRRRDRINERMKALQELIPHCSK-TDKASILDEAIDYLKSLQLQLQV 311
Query: 412 LSM 414
+ M
Sbjct: 312 MWM 314
>gi|414590707|tpg|DAA41278.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 286
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 44/64 (68%), Gaps = 1/64 (1%)
Query: 350 RARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQV 409
RA RG AT+ SL R RRE+I+ER+++LQ+LVP KV + ML+E YV+ LQ Q+
Sbjct: 195 RASRGAATEPQSLYARKRRERINERLRILQNLVPNGTKV-DISTMLEEAAQYVKFLQLQI 253
Query: 410 EFLS 413
+ LS
Sbjct: 254 KLLS 257
>gi|168038260|ref|XP_001771619.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162677058|gb|EDQ63533.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 569
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 32/63 (50%), Positives = 43/63 (68%), Gaps = 1/63 (1%)
Query: 350 RARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQV 409
RA+RG ATD S+ R RREKI+ER+K LQ LVP +V ML+E I++V+ L+ Q+
Sbjct: 471 RAKRGSATDPQSVYARHRREKINERLKTLQRLVPNGEQV-DIVTMLEEAIHFVKFLEFQL 529
Query: 410 EFL 412
E L
Sbjct: 530 ELL 532
>gi|449461837|ref|XP_004148648.1| PREDICTED: transcription factor HEC2-like [Cucumis sativus]
gi|449524665|ref|XP_004169342.1| PREDICTED: transcription factor HEC2-like [Cucumis sativus]
Length = 223
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 40/55 (72%), Gaps = 1/55 (1%)
Query: 358 DSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFL 412
D S+A R+RRE+ISE++++LQ LVPG K+ A MLDE I YV+ L+RQ+ L
Sbjct: 118 DPQSIAARLRRERISEKIRILQRLVPGGTKM-DTASMLDEAIRYVKFLKRQIRLL 171
>gi|302804013|ref|XP_002983759.1| hypothetical protein SELMODRAFT_118904 [Selaginella moellendorffii]
gi|300148596|gb|EFJ15255.1| hypothetical protein SELMODRAFT_118904 [Selaginella moellendorffii]
Length = 89
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 31/67 (46%), Positives = 49/67 (73%), Gaps = 1/67 (1%)
Query: 350 RARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQV 409
R +R +A + H+L+ER RR++I+E+M+ LQ+L+P NK T KA MLDE I Y++ LQ Q+
Sbjct: 12 RPKRSRAAEVHNLSERRRRDRINEKMRALQELIPNSNK-TDKASMLDEAIEYLKMLQLQL 70
Query: 410 EFLSMKL 416
+ ++L
Sbjct: 71 QVPKIEL 77
>gi|449463597|ref|XP_004149520.1| PREDICTED: transcription factor PIF5-like [Cucumis sativus]
gi|449505798|ref|XP_004162571.1| PREDICTED: transcription factor PIF5-like [Cucumis sativus]
Length = 550
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 49/141 (34%), Positives = 81/141 (57%), Gaps = 10/141 (7%)
Query: 317 GNGAVKAEDEGDDKQAKANNAKPPEPPKDYIHVRA---RRGQATDSHSLAERVRREKISE 373
GNG + +G++ + ++ A+ + R+ RR +A + H+L+ER RRE+I+E
Sbjct: 310 GNGNKRKGRDGEESECQSETAELESAEGNKTAPRSGSSRRTRAAEVHNLSERRRRERINE 369
Query: 374 RMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMKLASVNTRLELNVDALMSK 433
+MK LQ+L+P CNK T KA MLDE I Y++SLQ Q++ + M + + + V MS+
Sbjct: 370 KMKALQELIPHCNK-TDKASMLDEAIEYLKSLQLQLQVMWMG-SGMAPMMFPGVQHYMSR 427
Query: 434 -----DIYQPNKPLPHSIFQI 449
+ QP+ P H+ Q+
Sbjct: 428 VAMGMGMAQPSMPSIHNPMQL 448
>gi|77556977|gb|ABA99773.1| Helix-loop-helix DNA-binding domain containing protein [Oryza
sativa Japonica Group]
Length = 266
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 28/59 (47%), Positives = 40/59 (67%)
Query: 352 RRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVE 410
R A +H+L E+ RR KI+ER + LQ LVPGC+ + +A LD+ I Y++SLQ Q+E
Sbjct: 79 RHRHAAGAHNLTEKRRRFKITERFRTLQRLVPGCDNKSNQASTLDQTIQYMKSLQHQLE 137
>gi|30694919|ref|NP_851021.1| transcription factor PIF5 [Arabidopsis thaliana]
gi|7529749|emb|CAB86934.1| putative protein [Arabidopsis thaliana]
gi|332646347|gb|AEE79868.1| transcription factor PIF5 [Arabidopsis thaliana]
Length = 442
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 50/64 (78%), Gaps = 1/64 (1%)
Query: 351 ARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVE 410
RR +A + H+L+ER RR++I+ERMK LQ+L+P C++ T KA +LDE I+Y++SLQ Q++
Sbjct: 252 TRRSRAAEVHNLSERRRRDRINERMKALQELIPHCSR-TDKASILDEAIDYLKSLQMQLQ 310
Query: 411 FLSM 414
+ M
Sbjct: 311 VMWM 314
>gi|218187189|gb|EEC69616.1| hypothetical protein OsI_38990 [Oryza sativa Indica Group]
Length = 379
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/59 (47%), Positives = 40/59 (67%)
Query: 352 RRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVE 410
R A +H+L E+ RR KI+ER + LQ LVPGC+ + +A LD+ I Y++SLQ Q+E
Sbjct: 192 RHRHAAGAHNLTEKRRRFKITERFRTLQRLVPGCDNKSNQASTLDQTIQYMKSLQHQLE 250
>gi|30694924|ref|NP_191465.3| transcription factor PIF5 [Arabidopsis thaliana]
gi|79315658|ref|NP_001030889.1| transcription factor PIF5 [Arabidopsis thaliana]
gi|79315685|ref|NP_001030890.1| transcription factor PIF5 [Arabidopsis thaliana]
gi|75297820|sp|Q84LH8.1|PIF5_ARATH RecName: Full=Transcription factor PIF5; AltName: Full=Basic
helix-loop-helix protein 65; Short=AtbHLH65; Short=bHLH
65; AltName: Full=Phytochrome interacting factor-like 6;
AltName: Full=Phytochrome-interacting factor 5; AltName:
Full=Transcription factor EN 103; AltName: Full=bHLH
transcription factor bHLH065
gi|28372349|dbj|BAC56978.1| PIF3 like basic Helix Loop Helix protein [Arabidopsis thaliana]
gi|222424174|dbj|BAH20046.1| AT3G59060 [Arabidopsis thaliana]
gi|225898729|dbj|BAH30495.1| hypothetical protein [Arabidopsis thaliana]
gi|332646348|gb|AEE79869.1| transcription factor PIF5 [Arabidopsis thaliana]
gi|332646349|gb|AEE79870.1| transcription factor PIF5 [Arabidopsis thaliana]
gi|332646350|gb|AEE79871.1| transcription factor PIF5 [Arabidopsis thaliana]
Length = 444
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 50/64 (78%), Gaps = 1/64 (1%)
Query: 351 ARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVE 410
RR +A + H+L+ER RR++I+ERMK LQ+L+P C++ T KA +LDE I+Y++SLQ Q++
Sbjct: 252 TRRSRAAEVHNLSERRRRDRINERMKALQELIPHCSR-TDKASILDEAIDYLKSLQMQLQ 310
Query: 411 FLSM 414
+ M
Sbjct: 311 VMWM 314
>gi|168029799|ref|XP_001767412.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162681308|gb|EDQ67736.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 825
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 48/84 (57%), Gaps = 6/84 (7%)
Query: 329 DKQAKANNAKPPEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKV 388
D+ ++N A PP P + R R G ATD S+A R RREK ++R+++LQ LVP ++
Sbjct: 660 DQDFRSNFASPPAPKQ-----RRRHGTATDPQSIAARTRREKFTDRIRILQSLVPNGERL 714
Query: 389 TGKALMLDEIINYVQSLQRQVEFL 412
ML + YV+ LQ +V L
Sbjct: 715 D-TVHMLSQTFEYVRFLQHKVWDL 737
>gi|20127070|gb|AAM10954.1|AF488598_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 442
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 50/64 (78%), Gaps = 1/64 (1%)
Query: 351 ARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVE 410
RR +A + H+L+ER RR++I+ERMK LQ+L+P C++ T KA +LDE I+Y++SLQ Q++
Sbjct: 252 TRRSRAAEVHNLSERRRRDRINERMKALQELIPHCSR-TDKASILDEAIDYLKSLQMQLQ 310
Query: 411 FLSM 414
+ M
Sbjct: 311 VMWM 314
>gi|242076304|ref|XP_002448088.1| hypothetical protein SORBIDRAFT_06g020810 [Sorghum bicolor]
gi|241939271|gb|EES12416.1| hypothetical protein SORBIDRAFT_06g020810 [Sorghum bicolor]
Length = 226
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 45/64 (70%)
Query: 349 VRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQ 408
VRA+RG AT S+AER RR +ISE+++ LQ LVP +K T A MLD +++++ LQ +
Sbjct: 146 VRAKRGCATHPRSIAERERRTRISEKLRKLQALVPNMDKQTSTADMLDLAVDHIRGLQSE 205
Query: 409 VEFL 412
++ L
Sbjct: 206 LQAL 209
>gi|302795837|ref|XP_002979681.1| hypothetical protein SELMODRAFT_419388 [Selaginella moellendorffii]
gi|300152441|gb|EFJ19083.1| hypothetical protein SELMODRAFT_419388 [Selaginella moellendorffii]
Length = 335
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/60 (53%), Positives = 41/60 (68%), Gaps = 1/60 (1%)
Query: 350 RARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQV 409
RA+RG ATD S+ R RRE+I+ER++ LQ LVP KV ML+E INYV+ LQ Q+
Sbjct: 238 RAKRGSATDPQSIYARQRRERINERLRALQGLVPNGAKV-DIVTMLEEAINYVKFLQLQL 296
>gi|115460586|ref|NP_001053893.1| Os04g0618600 [Oryza sativa Japonica Group]
gi|38344324|emb|CAE02150.2| OSJNBa0058K23.6 [Oryza sativa Japonica Group]
gi|113565464|dbj|BAF15807.1| Os04g0618600 [Oryza sativa Japonica Group]
gi|218195592|gb|EEC78019.1| hypothetical protein OsI_17435 [Oryza sativa Indica Group]
gi|222629570|gb|EEE61702.1| hypothetical protein OsJ_16185 [Oryza sativa Japonica Group]
Length = 181
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 42/55 (76%), Gaps = 1/55 (1%)
Query: 360 HSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSM 414
H+ +ER RR++I+E++K LQ+L+P C K T K MLDE I+Y++SLQ Q++ L M
Sbjct: 18 HNFSERRRRDRINEKLKALQELLPNCTK-TDKVSMLDEAIDYLKSLQLQLQMLVM 71
>gi|297801316|ref|XP_002868542.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297314378|gb|EFH44801.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 300
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/148 (33%), Positives = 71/148 (47%), Gaps = 20/148 (13%)
Query: 285 SPSVNNTTKVAEANAS-ESSKNKRCKPNEGKANG----------NGAVKAEDE-----GD 328
SP V T+ E +S E + N RCKP NG N ++ E G+
Sbjct: 118 SPRVIKTSNSFETTSSFELTSNSRCKPATNHGNGDWLYSDSTIVNTGLRHESASPKLAGN 177
Query: 329 DKQAKANNAKPPEPPKDYIHVRARRGQAT---DSHSLAERVRREKISERMKLLQDLVPGC 385
+ +N + P + A+ T D SLA + RRE+ISER+K+LQ+LVP
Sbjct: 178 KRPFTGDNTHLSKKPSSGTNGEAKPKATTSPKDPQSLAAKNRRERISERLKVLQELVPNG 237
Query: 386 NKVTGKALMLDEIINYVQSLQRQVEFLS 413
KV ML++ I YV+ LQ QV+ L+
Sbjct: 238 TKVD-LVTMLEKAIGYVKFLQVQVKVLA 264
>gi|6693022|gb|AAF24948.1|AC012375_11 T22C5.19 [Arabidopsis thaliana]
Length = 279
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/127 (33%), Positives = 63/127 (49%), Gaps = 14/127 (11%)
Query: 289 NNTTKVAEANASESSKNKRCKP-----NEGKANGNGAVKAEDEGDDKQAKANNAKPPEPP 343
N+ V ++S K +R +E N + DD++A + K
Sbjct: 110 NSNCDVTRQELAKSKKKQRVSSESNTVDESNTNWVDGQSLSNSSDDEKASVTSVKGK--- 166
Query: 344 KDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQ 403
RA +G ATD SL R RREKI+ER+K LQ+LVP KV + ML+E ++YV+
Sbjct: 167 -----TRATKGTATDPQSLYARKRREKINERLKTLQNLVPNGTKV-DISTMLEEAVHYVK 220
Query: 404 SLQRQVE 410
LQ Q++
Sbjct: 221 FLQLQIK 227
>gi|255548227|ref|XP_002515170.1| hypothetical protein RCOM_1343120 [Ricinus communis]
gi|223545650|gb|EEF47154.1| hypothetical protein RCOM_1343120 [Ricinus communis]
Length = 584
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 44/56 (78%), Gaps = 1/56 (1%)
Query: 360 HSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMK 415
HSL+ER RR+KI+++M+ LQ L+P +KV KA MLD+ I Y+++LQ Q++ +SM+
Sbjct: 385 HSLSERKRRDKINKKMRALQALIPNSDKV-DKASMLDKAIEYLKTLQLQLQMMSMR 439
>gi|242033665|ref|XP_002464227.1| hypothetical protein SORBIDRAFT_01g014580 [Sorghum bicolor]
gi|241918081|gb|EER91225.1| hypothetical protein SORBIDRAFT_01g014580 [Sorghum bicolor]
Length = 300
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/148 (33%), Positives = 75/148 (50%), Gaps = 20/148 (13%)
Query: 268 SRKRKAVSKGKGKETAASPSVNNTTKVAEANASESSKNKRCKPNEGKANGNGAVKAEDEG 327
S KRK + +GK ++ T+ ++ S +KR K + +G E
Sbjct: 144 SDKRKHLEQGK---------LDGHTR--SRKYAKKSDSKRAKKIMQREDGQSLSSCTFEN 192
Query: 328 DDKQAKANNAKPPEPPKDYI--HVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGC 385
D +NA P D + +A R AT+S SL R RRE+I+ER+++LQ+LVP
Sbjct: 193 D------SNASQGRPVSDNLGGKAKADRRSATESQSLYARKRRERINERLRILQNLVPNG 246
Query: 386 NKVTGKALMLDEIINYVQSLQRQVEFLS 413
KV + ML+E + YV+ LQ Q++ LS
Sbjct: 247 TKVD-ISTMLEEAVEYVKFLQLQIKLLS 273
>gi|413918730|gb|AFW58662.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 223
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 45/64 (70%)
Query: 349 VRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQ 408
VRA+RG AT S+AER RR +ISE+++ LQ LVP +K T A MLD +++++ LQ +
Sbjct: 143 VRAKRGCATHPRSIAERERRTRISEKLRKLQALVPNMDKQTSTADMLDLAVDHIRGLQNE 202
Query: 409 VEFL 412
++ L
Sbjct: 203 LQAL 206
>gi|440577342|emb|CCI55348.1| PH01B019A14.17 [Phyllostachys edulis]
Length = 184
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/58 (48%), Positives = 43/58 (74%), Gaps = 1/58 (1%)
Query: 357 TDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSM 414
+ H+ +ER RR++I+E++K LQ+L+P C K T K MLDE I+Y++SLQ Q++ L M
Sbjct: 19 VEFHNFSERRRRDRINEKLKALQELLPNCTK-TDKVSMLDEAIDYLKSLQIQLQMLVM 75
>gi|356507477|ref|XP_003522492.1| PREDICTED: uncharacterized protein LOC100779374 [Glycine max]
Length = 243
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/55 (54%), Positives = 40/55 (72%), Gaps = 1/55 (1%)
Query: 358 DSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFL 412
D S+A R RRE+ISE++++LQ LVPG K+ A MLDE I YV+ L+RQ+ FL
Sbjct: 127 DPQSVAARHRRERISEKIRILQRLVPGGTKM-DTASMLDEAIRYVKFLKRQIRFL 180
>gi|357444407|ref|XP_003592481.1| Transcription factor bHLH84 [Medicago truncatula]
gi|355481529|gb|AES62732.1| Transcription factor bHLH84 [Medicago truncatula]
Length = 287
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 47/76 (61%), Gaps = 1/76 (1%)
Query: 338 KPPEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDE 397
K E PK RA ATD+ S+ R RRE+I+ER+++LQ LVP KV + ML+E
Sbjct: 185 KEHEAPKLGRKSRAASSPATDAQSIYARKRRERINERLRILQTLVPNGTKV-DISTMLEE 243
Query: 398 IINYVQSLQRQVEFLS 413
+ YV+ LQ Q++ LS
Sbjct: 244 AVQYVKFLQLQIKLLS 259
>gi|224077304|ref|XP_002305203.1| predicted protein [Populus trichocarpa]
gi|222848167|gb|EEE85714.1| predicted protein [Populus trichocarpa]
Length = 334
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/91 (43%), Positives = 57/91 (62%), Gaps = 12/91 (13%)
Query: 327 GDDKQA---KANNA-KPPEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLV 382
G+ QA + NNA K P+P ++ G A D S+A + RRE+ISER+K+LQDLV
Sbjct: 212 GESMQALKKQCNNATKKPKP-------KSAAGPAKDLQSIAAKNRRERISERLKVLQDLV 264
Query: 383 PGCNKVTGKALMLDEIINYVQSLQRQVEFLS 413
P +KV ML++ I+YV+ LQ QV+ L+
Sbjct: 265 PNGSKVD-LVTMLEKAISYVKFLQLQVKVLA 294
>gi|242084070|ref|XP_002442460.1| hypothetical protein SORBIDRAFT_08g020330 [Sorghum bicolor]
gi|241943153|gb|EES16298.1| hypothetical protein SORBIDRAFT_08g020330 [Sorghum bicolor]
Length = 373
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/52 (55%), Positives = 41/52 (78%), Gaps = 1/52 (1%)
Query: 367 RREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMKLAS 418
RR KI+ER+K LQ LVPGC+K + +A LD+ I+Y++SLQ QV+ +S+ LAS
Sbjct: 225 RRHKINERLKTLQQLVPGCSK-SNQASTLDQTIHYMKSLQHQVQAMSVGLAS 275
>gi|15240202|ref|NP_201512.1| transcription factor ALC [Arabidopsis thaliana]
gi|75309083|sp|Q9FHA2.1|ALC_ARATH RecName: Full=Transcription factor ALC; AltName: Full=Basic
helix-loop-helix protein 73; Short=AtbHLH73; Short=bHLH
73; AltName: Full=Protein ALCATRAZ; AltName:
Full=Transcription factor EN 98; AltName: Full=bHLH
transcription factor bHLH073
gi|10177598|dbj|BAB10945.1| unnamed protein product [Arabidopsis thaliana]
gi|114050687|gb|ABI49493.1| At5g67110 [Arabidopsis thaliana]
gi|332010918|gb|AED98301.1| transcription factor ALC [Arabidopsis thaliana]
Length = 210
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/118 (37%), Positives = 64/118 (54%), Gaps = 29/118 (24%)
Query: 360 HSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLS------ 413
H+L+E+ RR KI+E+MK LQ L+P NK T KA MLDE I Y++ LQ QV+ L+
Sbjct: 98 HNLSEKKRRSKINEKMKALQKLIPNSNK-TDKASMLDEAIEYLKQLQLQVQTLAVMNGLG 156
Query: 414 ---MKLASV----NTRL------ELNVDALMSKDIYQPNKPLPHSIFQIDSSASAFFS 458
M+L V +TR+ +LN++ L++ PHS+ +S FS
Sbjct: 157 LNPMRLPQVPPPTHTRINETLEQDLNLETLLAA---------PHSLEPAKTSQGMCFS 205
>gi|30689224|ref|NP_850381.1| transcription factor PIF4 [Arabidopsis thaliana]
gi|330255104|gb|AEC10198.1| transcription factor PIF4 [Arabidopsis thaliana]
Length = 428
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/61 (52%), Positives = 49/61 (80%), Gaps = 1/61 (1%)
Query: 352 RRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEF 411
RR +A + H+L+ER RR++I+ERMK LQ+L+P C+K T KA +LDE I+Y++SLQ Q++
Sbjct: 254 RRSRAAEVHNLSERRRRDRINERMKALQELIPHCSK-TDKASILDEAIDYLKSLQLQLQV 312
Query: 412 L 412
+
Sbjct: 313 M 313
>gi|334184231|ref|NP_001189527.1| transcription factor bHLH84 [Arabidopsis thaliana]
gi|330251239|gb|AEC06333.1| transcription factor bHLH84 [Arabidopsis thaliana]
Length = 341
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 62/119 (52%), Gaps = 26/119 (21%)
Query: 308 CKPNEGKANGNGAVKAEDEGDDKQAKANNAKPPEPPKDYIHVRARRGQATDSHSLAERV- 366
C +E +NG ++++G+D +A N K RA RG ATD SL R+
Sbjct: 208 CSDDE--SNGGDTFLSKEDGEDSKALNLNGK----------TRASRGAATDPQSLYARLK 255
Query: 367 ------------RREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLS 413
RRE+I+ER+++LQ LVP KV + ML+E + YV+ LQ Q++ LS
Sbjct: 256 QLNKVHCMMVQKRRERINERLRILQHLVPNGTKV-DISTMLEEAVQYVKFLQLQIKLLS 313
>gi|21536863|gb|AAM61195.1| unknown [Arabidopsis thaliana]
Length = 210
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/118 (37%), Positives = 64/118 (54%), Gaps = 29/118 (24%)
Query: 360 HSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLS------ 413
H+L+E+ RR KI+E+MK LQ L+P NK T KA MLDE I Y++ LQ QV+ L+
Sbjct: 98 HNLSEKKRRSKINEKMKALQKLIPNSNK-TDKASMLDEAIEYLKQLQLQVQTLAVMNGLG 156
Query: 414 ---MKLASV----NTRL------ELNVDALMSKDIYQPNKPLPHSIFQIDSSASAFFS 458
M+L V +TR+ +LN++ L++ PHS+ +S FS
Sbjct: 157 LNPMRLPQVPPPTHTRINETLEQDLNLETLLAA---------PHSLEPAKTSQGMCFS 205
>gi|30689218|ref|NP_565991.2| transcription factor PIF4 [Arabidopsis thaliana]
gi|28201855|sp|Q8W2F3.1|PIF4_ARATH RecName: Full=Transcription factor PIF4; AltName: Full=Basic
helix-loop-helix protein 9; Short=AtbHLH9; Short=bHLH 9;
AltName: Full=Phytochrome-interacting factor 4; AltName:
Full=Short under red-light 2; AltName:
Full=Transcription factor EN 102; AltName: Full=bHLH
transcription factor bHLH009
gi|18026966|gb|AAL55716.1|AF251694_1 putative transcription factor BHLH9 [Arabidopsis thaliana]
gi|21068661|emb|CAD29449.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
gi|222423257|dbj|BAH19605.1| AT2G43010 [Arabidopsis thaliana]
gi|225898591|dbj|BAH30426.1| hypothetical protein [Arabidopsis thaliana]
gi|291506714|gb|ADE08789.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
gi|291506716|gb|ADE08790.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
gi|291506718|gb|ADE08791.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
gi|291506720|gb|ADE08792.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
gi|291506722|gb|ADE08793.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
gi|291506724|gb|ADE08794.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
gi|291506726|gb|ADE08795.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
gi|291506728|gb|ADE08796.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
gi|330255103|gb|AEC10197.1| transcription factor PIF4 [Arabidopsis thaliana]
Length = 430
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/61 (52%), Positives = 49/61 (80%), Gaps = 1/61 (1%)
Query: 352 RRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEF 411
RR +A + H+L+ER RR++I+ERMK LQ+L+P C+K T KA +LDE I+Y++SLQ Q++
Sbjct: 254 RRSRAAEVHNLSERRRRDRINERMKALQELIPHCSK-TDKASILDEAIDYLKSLQLQLQV 312
Query: 412 L 412
+
Sbjct: 313 M 313
>gi|222424750|dbj|BAH20328.1| AT2G43010 [Arabidopsis thaliana]
Length = 409
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/61 (52%), Positives = 49/61 (80%), Gaps = 1/61 (1%)
Query: 352 RRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEF 411
RR +A + H+L+ER RR++I+ERMK LQ+L+P C+K T KA +LDE I+Y++SLQ Q++
Sbjct: 233 RRSRAAEVHNLSERRRRDRINERMKALQELIPHCSK-TDKASILDEAIDYLKSLQLQLQV 291
Query: 412 L 412
+
Sbjct: 292 M 292
>gi|51970054|dbj|BAD43719.1| putative bHLH transcription factor (bHLH073/ALCATRAZ) [Arabidopsis
thaliana]
Length = 210
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/118 (37%), Positives = 64/118 (54%), Gaps = 29/118 (24%)
Query: 360 HSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLS------ 413
H+L+E+ RR KI+E+MK LQ L+P NK T KA MLDE I Y++ LQ QV+ L+
Sbjct: 98 HNLSEKKRRSKINEKMKALQKLIPNSNK-TDKASMLDEAIEYLKQLQLQVQTLAVMNGLG 156
Query: 414 ---MKLASV----NTRL------ELNVDALMSKDIYQPNKPLPHSIFQIDSSASAFFS 458
M+L V +TR+ +LN++ L++ PHS+ +S FS
Sbjct: 157 LNPMRLPQVPPPTHTRINETLEQDLNLETLLAA---------PHSLEPAKTSQGMCFS 205
>gi|291506702|gb|ADE08783.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
gi|291506704|gb|ADE08784.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
gi|291506706|gb|ADE08785.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
gi|291506708|gb|ADE08786.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
gi|291506710|gb|ADE08787.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
gi|291506712|gb|ADE08788.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
Length = 430
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/61 (52%), Positives = 49/61 (80%), Gaps = 1/61 (1%)
Query: 352 RRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEF 411
RR +A + H+L+ER RR++I+ERMK LQ+L+P C+K T KA +LDE I+Y++SLQ Q++
Sbjct: 254 RRSRAAEVHNLSERRRRDRINERMKALQELIPHCSK-TDKASILDEAIDYLKSLQLQLQV 312
Query: 412 L 412
+
Sbjct: 313 M 313
>gi|140084359|gb|ABO84933.1| Rhd6-like 4 [Physcomitrella patens]
Length = 67
Score = 60.5 bits (145), Expect = 2e-06, Method: Composition-based stats.
Identities = 31/59 (52%), Positives = 39/59 (66%), Gaps = 1/59 (1%)
Query: 354 GQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFL 412
G ATD S+ R RREKI+ER++ LQ L+P KV MLDE ++YVQ L+RQV L
Sbjct: 1 GSATDPQSVHARARREKIAERLRKLQHLIPNGGKVD-IVTMLDEAVHYVQFLKRQVTLL 58
>gi|255644916|gb|ACU22958.1| unknown [Glycine max]
Length = 242
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/55 (56%), Positives = 41/55 (74%), Gaps = 1/55 (1%)
Query: 358 DSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFL 412
D S+A R RRE+ISER+K+LQ LVPG K+ A MLDE I+YV+ L++QV+ L
Sbjct: 139 DPQSVAARHRRERISERIKILQRLVPGGTKM-DTASMLDEAIHYVKFLKKQVQTL 192
>gi|342298442|emb|CBY05411.1| ALCATRAZ-like protein [Aethionema carneum]
Length = 224
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/67 (50%), Positives = 45/67 (67%), Gaps = 2/67 (2%)
Query: 349 VRAR-RGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQR 407
VR R R H+L+E+ RR KI+E+MK LQ L+P NK T KA MLDE I Y++ LQ
Sbjct: 97 VRTRQRSIDAKFHNLSEKRRRSKINEKMKALQKLIPNSNK-TDKASMLDEAIEYLKQLQL 155
Query: 408 QVEFLSM 414
QV+ L++
Sbjct: 156 QVQALAV 162
>gi|342298426|emb|CBY05403.1| ALCATRAZ-like protein [Lepidium appelianum]
Length = 173
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/55 (54%), Positives = 41/55 (74%), Gaps = 1/55 (1%)
Query: 360 HSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSM 414
H+L+E+ RR KI+E+MK LQ L+P NK T KA MLDE I Y++ LQ QV+ L++
Sbjct: 97 HNLSEKRRRSKINEKMKALQKLIPNSNK-TDKASMLDEAIEYMKQLQLQVQTLAV 150
>gi|255561634|ref|XP_002521827.1| DNA binding protein, putative [Ricinus communis]
gi|223539040|gb|EEF40637.1| DNA binding protein, putative [Ricinus communis]
Length = 284
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/51 (56%), Positives = 38/51 (74%)
Query: 349 VRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEII 399
VRA+RG AT S+AERVRR +IS+R++ LQ+LVP +K T A MLDE +
Sbjct: 192 VRAKRGCATHPRSIAERVRRTRISDRIRKLQELVPNMDKQTNTADMLDEAV 242
>gi|357454361|ref|XP_003597461.1| Transcription factor bHLH122 [Medicago truncatula]
gi|355486509|gb|AES67712.1| Transcription factor bHLH122 [Medicago truncatula]
Length = 411
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/49 (55%), Positives = 35/49 (71%)
Query: 347 IHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALML 395
+ +RA+RG AT S+AERVRR KISERM+ LQDLVP +K+ L +
Sbjct: 330 MKIRAKRGCATHPRSIAERVRRTKISERMRKLQDLVPNMDKICWTWLWI 378
>gi|242084060|ref|XP_002442455.1| hypothetical protein SORBIDRAFT_08g020275 [Sorghum bicolor]
gi|241943148|gb|EES16293.1| hypothetical protein SORBIDRAFT_08g020275 [Sorghum bicolor]
Length = 155
Score = 60.5 bits (145), Expect = 3e-06, Method: Composition-based stats.
Identities = 25/60 (41%), Positives = 44/60 (73%)
Query: 351 ARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVE 410
ARR ++H+L E+ RR KI +++K L+ LVPGC+ + +A +LD+ I +++SLQ+Q++
Sbjct: 19 ARRSHPAETHNLTEKRRRRKIDDKLKTLRQLVPGCDDKSNQASILDQTIQHIKSLQQQIQ 78
>gi|222623194|gb|EEE57326.1| hypothetical protein OsJ_07428 [Oryza sativa Japonica Group]
Length = 103
Score = 60.5 bits (145), Expect = 3e-06, Method: Composition-based stats.
Identities = 31/64 (48%), Positives = 45/64 (70%)
Query: 349 VRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQ 408
VRA+RG AT S+AER RR +ISE+++ LQ+LVP +K T A MLD + +++ LQ Q
Sbjct: 27 VRAKRGCATHPRSIAERERRTRISEKLRKLQELVPNMDKQTSTADMLDLAVEHIKGLQSQ 86
Query: 409 VEFL 412
++ L
Sbjct: 87 LQAL 90
>gi|225458639|ref|XP_002282817.1| PREDICTED: transcription factor HEC1 [Vitis vinifera]
gi|302142304|emb|CBI19507.3| unnamed protein product [Vitis vinifera]
Length = 248
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 50/81 (61%), Gaps = 3/81 (3%)
Query: 358 DSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMKLA 417
D S+A R RRE+ISE++++LQ LVPG K+ A MLDE I+YV+ L+ QV+ S++ A
Sbjct: 154 DPQSVAARHRRERISEKIRILQRLVPGGTKM-DTASMLDEAIHYVKFLKTQVQ--SLERA 210
Query: 418 SVNTRLELNVDALMSKDIYQP 438
+ N + MS Y P
Sbjct: 211 AANRPAGIGFPVTMSNGSYLP 231
>gi|226492870|ref|NP_001146411.1| uncharacterized protein LOC100279991 [Zea mays]
gi|219887061|gb|ACL53905.1| unknown [Zea mays]
Length = 254
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/48 (54%), Positives = 39/48 (81%), Gaps = 1/48 (2%)
Query: 367 RREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSM 414
RR++I+E+M+ LQ+L+P CNK+ KA MLDE I Y+++LQ QV+ +SM
Sbjct: 12 RRDRINEKMRALQELIPNCNKID-KASMLDEAIEYLKTLQLQVQMMSM 58
>gi|223702412|gb|ACN21637.1| putative basic helix-loop-helix protein BHLH13 [Lotus japonicus]
Length = 262
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 40/55 (72%), Gaps = 1/55 (1%)
Query: 358 DSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFL 412
D S+A R RRE+ISE++++LQ LVPG K+ A MLDE I+YV+ L+RQ+ L
Sbjct: 134 DPQSVAARHRRERISEKIRILQRLVPGGTKM-DTASMLDEAIHYVKFLKRQIRLL 187
>gi|342298438|emb|CBY05409.1| ALCATRAZ-like protein [Lepidium campestre]
Length = 197
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/55 (54%), Positives = 41/55 (74%), Gaps = 1/55 (1%)
Query: 360 HSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSM 414
H+L+E+ RR KI+E+MK LQ L+P NK T KA MLDE I Y++ LQ QV+ L++
Sbjct: 97 HNLSEKRRRSKINEKMKALQKLIPNSNK-TDKASMLDEAIEYLKQLQLQVQTLAV 150
>gi|140084346|gb|ABO84932.1| Rhd6-like 3 [Physcomitrella patens]
Length = 67
Score = 59.7 bits (143), Expect = 4e-06, Method: Composition-based stats.
Identities = 34/59 (57%), Positives = 38/59 (64%), Gaps = 1/59 (1%)
Query: 354 GQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFL 412
G ATD S+ R RREKI+ER+K LQ LVP KV MLDE I+YVQ LQ QV L
Sbjct: 1 GSATDPQSVYARHRREKINERLKTLQHLVPNGAKVD-IVTMLDEAIHYVQFLQLQVTLL 58
>gi|47497385|dbj|BAD19423.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 110
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 45/63 (71%), Gaps = 1/63 (1%)
Query: 350 RARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQV 409
R +R +A + H+L+E+ RR +I+E+MK LQ L+P +K T KA MLD+ I Y++ LQ QV
Sbjct: 27 RGKRSRAAEVHNLSEKRRRSRINEKMKALQSLIPNSSK-TDKASMLDDAIEYLKQLQLQV 85
Query: 410 EFL 412
+ +
Sbjct: 86 QMI 88
>gi|224069350|ref|XP_002302962.1| predicted protein [Populus trichocarpa]
gi|222844688|gb|EEE82235.1| predicted protein [Populus trichocarpa]
Length = 330
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 43/60 (71%), Gaps = 1/60 (1%)
Query: 354 GQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLS 413
G A D S+A + RRE+ISER+K+LQDLVP +KV ML++ I+YV+ LQ QV+ L+
Sbjct: 232 GPAKDPQSIAAKNRRERISERLKMLQDLVPNGSKV-DLVTMLEKAISYVKFLQLQVKVLA 290
>gi|356506557|ref|XP_003522046.1| PREDICTED: transcription factor UNE10-like [Glycine max]
Length = 397
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 52/86 (60%), Gaps = 10/86 (11%)
Query: 342 PPKDYIHVRARRGQATDS--------HSLAERVRREKISERMKLLQDLVPGCNKVTGKAL 393
P +DY + R ++ H +ER RR+KI++RMK LQ LVP +K T KA
Sbjct: 213 PDEDYKATKVDRSSGSNKRIKANSVVHKQSERRRRDKINQRMKELQKLVPNSSK-TDKAS 271
Query: 394 MLDEIINYVQSLQRQVEFLS-MKLAS 418
MLDE+I Y++ LQ QV+ ++ MK+ +
Sbjct: 272 MLDEVIQYMKQLQAQVQMMNWMKMYT 297
>gi|297794285|ref|XP_002865027.1| hypothetical protein ARALYDRAFT_496889 [Arabidopsis lyrata subsp.
lyrata]
gi|297310862|gb|EFH41286.1| hypothetical protein ARALYDRAFT_496889 [Arabidopsis lyrata subsp.
lyrata]
Length = 206
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/55 (54%), Positives = 41/55 (74%), Gaps = 1/55 (1%)
Query: 360 HSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSM 414
H+L+E+ RR KI+E+MK LQ L+P NK T KA MLDE I Y++ LQ QV+ L++
Sbjct: 94 HNLSEKRRRSKINEKMKALQKLIPNSNK-TDKASMLDEAIEYLKQLQLQVQTLAV 147
>gi|356511167|ref|XP_003524301.1| PREDICTED: uncharacterized protein LOC100775296 [Glycine max]
Length = 266
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 39/55 (70%), Gaps = 1/55 (1%)
Query: 358 DSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFL 412
D S+A R RRE+ISE++++LQ LVPG K+ A MLDE I YV+ L+RQ+ L
Sbjct: 133 DPQSVAARHRRERISEKIRILQRLVPGGTKM-DTASMLDEAIRYVKFLKRQIRLL 186
>gi|356528585|ref|XP_003532880.1| PREDICTED: uncharacterized protein LOC100777351 [Glycine max]
Length = 271
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 39/55 (70%), Gaps = 1/55 (1%)
Query: 358 DSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFL 412
D S+A R RRE+ISE++++LQ LVPG K+ A MLDE I YV+ L+RQ+ L
Sbjct: 138 DPQSVAARHRRERISEKIRILQRLVPGGTKM-DTASMLDEAIRYVKFLKRQIRLL 191
>gi|222632408|gb|EEE64540.1| hypothetical protein OsJ_19392 [Oryza sativa Japonica Group]
Length = 388
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 51/76 (67%), Gaps = 9/76 (11%)
Query: 340 PEPPKDYIHVRARRGQ---ATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLD 396
P+PP+ R RR ++D ++A R+RRE++SER+++LQ LVPG +K+ A MLD
Sbjct: 262 PQPPQ-----RPRRKNVRISSDPQTVAARLRRERVSERLRVLQRLVPGGSKMD-TATMLD 315
Query: 397 EIINYVQSLQRQVEFL 412
E +Y++ L+ Q+E L
Sbjct: 316 EAASYLKFLKSQLEAL 331
>gi|452030238|gb|AGF92088.1| indehiscent-like protein [Phaseolus vulgaris]
Length = 282
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 39/55 (70%), Gaps = 1/55 (1%)
Query: 358 DSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFL 412
D S+A R RRE+ISE++++LQ LVPG K+ A MLDE I YV+ L+RQ+ L
Sbjct: 146 DPQSVAARHRRERISEKIRILQRLVPGGTKM-DTASMLDEAIRYVKFLKRQIRLL 199
>gi|242086066|ref|XP_002443458.1| hypothetical protein SORBIDRAFT_08g019780 [Sorghum bicolor]
gi|241944151|gb|EES17296.1| hypothetical protein SORBIDRAFT_08g019780 [Sorghum bicolor]
Length = 316
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 43/64 (67%), Gaps = 1/64 (1%)
Query: 350 RARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQV 409
RA R T+ S+ R RRE+I+ER+K+LQ+LVP KV + ML+E ++YV+ LQ Q+
Sbjct: 227 RAGRSATTEPQSIYARKRRERINERLKILQNLVPNGTKVD-ISTMLEEAVHYVKFLQLQI 285
Query: 410 EFLS 413
LS
Sbjct: 286 RLLS 289
>gi|168027682|ref|XP_001766358.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162682267|gb|EDQ68686.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 81
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 47/64 (73%), Gaps = 1/64 (1%)
Query: 351 ARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVE 410
A+R +A + H+ +ER RR++I+E+M+ LQ+L+P NK T KA MLDE I Y++ LQ Q++
Sbjct: 19 AKRSRAAEVHNQSERRRRDRINEKMRALQELIPNSNK-TDKASMLDEAIEYLKMLQLQLQ 77
Query: 411 FLSM 414
++
Sbjct: 78 VCAV 81
>gi|225446765|ref|XP_002278399.1| PREDICTED: transcription factor PIF5-like [Vitis vinifera]
Length = 531
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/54 (51%), Positives = 41/54 (75%), Gaps = 1/54 (1%)
Query: 351 ARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQS 404
RR +A + H+L+ER RR++I+E+MK LQ+L+P NK + KA MLDE I Y++S
Sbjct: 334 TRRSRAAEVHNLSERRRRDRINEKMKALQELIPHSNK-SDKASMLDEAIEYLKS 386
>gi|357519927|ref|XP_003630252.1| Transcription factor HEC3 [Medicago truncatula]
gi|355524274|gb|AET04728.1| Transcription factor HEC3 [Medicago truncatula]
Length = 275
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 40/55 (72%), Gaps = 1/55 (1%)
Query: 358 DSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFL 412
D S+A R RRE+ISE++++LQ LVPG K+ A MLDE I YV+ L+RQ++ L
Sbjct: 123 DPQSVAARHRRERISEKIRILQRLVPGGTKM-DTASMLDEAIRYVKFLKRQIKLL 176
>gi|140084368|gb|ABO84934.1| Rhd6-like 5 [Physcomitrella patens]
Length = 67
Score = 59.3 bits (142), Expect = 6e-06, Method: Composition-based stats.
Identities = 34/59 (57%), Positives = 40/59 (67%), Gaps = 1/59 (1%)
Query: 354 GQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFL 412
G ATD S+ R RREKI+ER+K LQ+LVP KV MLDE I+YV+ LQ QVE L
Sbjct: 1 GSATDPQSVYARHRREKINERLKSLQNLVPNGAKVD-IVTMLDEAIHYVKFLQNQVELL 58
>gi|356509769|ref|XP_003523618.1| PREDICTED: uncharacterized protein LOC100779202 [Glycine max]
Length = 332
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 43/65 (66%), Gaps = 1/65 (1%)
Query: 349 VRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQ 408
+A +G ATD SL R RRE+I +R+++LQ+LVP KV + ML+E + YV+ LQ Q
Sbjct: 240 TKASKGSATDPQSLYARKRRERIDDRLRILQNLVPNGTKVD-ISTMLEEAVQYVKFLQLQ 298
Query: 409 VEFLS 413
+ LS
Sbjct: 299 NKLLS 303
>gi|302143504|emb|CBI22065.3| unnamed protein product [Vitis vinifera]
Length = 544
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/54 (51%), Positives = 41/54 (75%), Gaps = 1/54 (1%)
Query: 351 ARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQS 404
RR +A + H+L+ER RR++I+E+MK LQ+L+P NK + KA MLDE I Y++S
Sbjct: 334 TRRSRAAEVHNLSERRRRDRINEKMKALQELIPHSNK-SDKASMLDEAIEYLKS 386
>gi|218184992|gb|EEC67419.1| hypothetical protein OsI_34609 [Oryza sativa Indica Group]
Length = 465
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 45/63 (71%), Gaps = 1/63 (1%)
Query: 349 VRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQ 408
+ +R +A H+ +ER RR++I+++MK LQ LVP +K T KA MLDE+I+Y++ LQ Q
Sbjct: 269 ISTKRSRAAAIHNESERKRRDRINQKMKTLQKLVPNSSK-TDKASMLDEVIDYLKQLQAQ 327
Query: 409 VEF 411
V+
Sbjct: 328 VQV 330
>gi|13486646|dbj|BAB39884.1| unknown protein [Oryza sativa Japonica Group]
Length = 294
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 30/54 (55%), Positives = 39/54 (72%), Gaps = 1/54 (1%)
Query: 360 HSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLS 413
S A +VRRE+ISER+K+LQDLVP KV ML++ INYV+ LQ QV+ L+
Sbjct: 209 QSAAAKVRRERISERLKVLQDLVPNGTKVD-LVTMLEKAINYVKFLQLQVKVLA 261
>gi|115434094|ref|NP_001041805.1| Os01g0111500 [Oryza sativa Japonica Group]
gi|113531336|dbj|BAF03719.1| Os01g0111500 [Oryza sativa Japonica Group]
gi|215766224|dbj|BAG98452.1| unnamed protein product [Oryza sativa Japonica Group]
gi|323388931|gb|ADX60270.1| bHLH transcription factor [Oryza sativa Japonica Group]
Length = 295
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 30/54 (55%), Positives = 39/54 (72%), Gaps = 1/54 (1%)
Query: 360 HSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLS 413
S A +VRRE+ISER+K+LQDLVP KV ML++ INYV+ LQ QV+ L+
Sbjct: 210 QSAAAKVRRERISERLKVLQDLVPNGTKVD-LVTMLEKAINYVKFLQLQVKVLA 262
>gi|145712853|gb|ABP96466.1| phytochrome interacting factor 4 [Arabidopsis lyrata subsp.
petraea]
Length = 250
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/54 (53%), Positives = 43/54 (79%), Gaps = 2/54 (3%)
Query: 352 RRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSL 405
RR +A + H+L+ER RR++I+ERMK LQ+L+P C+K T KA +LD I+Y++SL
Sbjct: 199 RRSRAAEVHNLSER-RRDRINERMKALQELIPHCSK-TDKASILDGAIDYMKSL 250
>gi|357143431|ref|XP_003572919.1| PREDICTED: transcription factor SPATULA-like [Brachypodium
distachyon]
Length = 312
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 30/58 (51%), Positives = 43/58 (74%), Gaps = 1/58 (1%)
Query: 358 DSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMK 415
+ H+L+E+ RR +I+E+MK LQ LVP +K T KA MLD+ I Y++ LQ QV+ LSM+
Sbjct: 68 EVHNLSEKRRRCRINEKMKALQSLVPNSSK-TDKASMLDDAIEYLKQLQLQVQMLSMR 124
>gi|167999578|ref|XP_001752494.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162696394|gb|EDQ82733.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 538
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 29/57 (50%), Positives = 41/57 (71%), Gaps = 1/57 (1%)
Query: 356 ATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFL 412
+ + S+A R RR+KISER+++L+ L+PG NK+ A MLDE I YV+ LQ QV+ L
Sbjct: 387 SVEPQSVAARHRRKKISERIRVLEKLIPGGNKM-DTATMLDEAIEYVKFLQLQVQIL 442
>gi|242052339|ref|XP_002455315.1| hypothetical protein SORBIDRAFT_03g008290 [Sorghum bicolor]
gi|241927290|gb|EES00435.1| hypothetical protein SORBIDRAFT_03g008290 [Sorghum bicolor]
Length = 290
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 40/56 (71%), Gaps = 1/56 (1%)
Query: 358 DSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLS 413
D S+A +VRREKI+E++K+LQDLVP KV ML++ I YV+ LQ QV+ L+
Sbjct: 203 DPQSVAAKVRREKIAEKLKVLQDLVPNGTKVD-LVTMLEKAITYVKFLQLQVKVLA 257
>gi|140084376|gb|ABO84935.1| Rhd6-like 6 [Physcomitrella patens]
Length = 67
Score = 58.5 bits (140), Expect = 8e-06, Method: Composition-based stats.
Identities = 34/59 (57%), Positives = 40/59 (67%), Gaps = 1/59 (1%)
Query: 354 GQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFL 412
G ATD S+ R RREKI+ER+K LQ+LVP KV MLDE I+YV+ LQ QVE L
Sbjct: 1 GSATDPQSVYARHRREKINERLKNLQNLVPNGAKVD-IVTMLDEAIHYVKFLQTQVELL 58
>gi|125544879|gb|EAY91018.1| hypothetical protein OsI_12623 [Oryza sativa Indica Group]
Length = 310
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 30/58 (51%), Positives = 42/58 (72%), Gaps = 1/58 (1%)
Query: 356 ATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLS 413
ATD SL R RRE+I+ER+K+LQ+LVP KV + ML+E ++YV+ LQ Q++ LS
Sbjct: 228 ATDPQSLYARKRRERINERLKILQNLVPNGTKVD-ISTMLEEAMHYVKFLQLQIKLLS 284
>gi|218187376|gb|EEC69803.1| hypothetical protein OsI_00101 [Oryza sativa Indica Group]
Length = 288
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 30/54 (55%), Positives = 39/54 (72%), Gaps = 1/54 (1%)
Query: 360 HSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLS 413
S A +VRRE+ISER+K+LQDLVP KV ML++ INYV+ LQ QV+ L+
Sbjct: 203 QSAAAKVRRERISERLKVLQDLVPNGTKVD-LVTMLEKAINYVKFLQLQVKVLA 255
>gi|115454133|ref|NP_001050667.1| Os03g0617800 [Oryza sativa Japonica Group]
gi|50428697|gb|AAT77048.1| putative transcription factor [Oryza sativa Japonica Group]
gi|108709850|gb|ABF97645.1| Helix-loop-helix DNA-binding domain containing protein [Oryza
sativa Japonica Group]
gi|113549138|dbj|BAF12581.1| Os03g0617800 [Oryza sativa Japonica Group]
gi|125587132|gb|EAZ27796.1| hypothetical protein OsJ_11741 [Oryza sativa Japonica Group]
Length = 310
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 30/58 (51%), Positives = 42/58 (72%), Gaps = 1/58 (1%)
Query: 356 ATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLS 413
ATD SL R RRE+I+ER+K+LQ+LVP KV + ML+E ++YV+ LQ Q++ LS
Sbjct: 228 ATDPQSLYARKRRERINERLKILQNLVPNGTKVD-ISTMLEEAMHYVKFLQLQIKLLS 284
>gi|223702404|gb|ACN21633.1| putative basic helix-loop-helix protein BHLH9 [Lotus japonicus]
Length = 165
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 53/89 (59%), Gaps = 5/89 (5%)
Query: 355 QATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSM 414
+A + +L+ + RR +I+E MK LQ+L+P NK T KA MLDE I+Y++ LQ QV+ LS+
Sbjct: 75 RAAEVLNLSGKRRRSRINENMKALQNLIPNSNK-TDKAFMLDEAIDYLKQLQLQVQMLSL 133
Query: 415 K----LASVNTRLELNVDALMSKDIYQPN 439
+ L + + D KD+ + N
Sbjct: 134 RNGLSLHPICLKFLYKFDGKYLKDVLERN 162
>gi|22327541|ref|NP_680385.1| transcription factor bHLH139 [Arabidopsis thaliana]
gi|122213858|sp|Q3E7L7.1|BH139_ARATH RecName: Full=Transcription factor bHLH139; AltName: Full=Basic
helix-loop-helix protein 139; Short=AtbHLH139;
Short=bHLH 139; AltName: Full=Transcription factor EN
116; AltName: Full=bHLH transcription factor bHLH139
gi|332007536|gb|AED94919.1| transcription factor bHLH139 [Arabidopsis thaliana]
Length = 223
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 44/64 (68%), Gaps = 1/64 (1%)
Query: 350 RARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQV 409
+A RG A+D SL R RRE+I++R+K LQ LVP KV + ML++ ++YV+ LQ Q+
Sbjct: 133 KANRGIASDPQSLYARKRRERINDRLKTLQSLVPNGTKV-DISTMLEDAVHYVKFLQLQI 191
Query: 410 EFLS 413
+ LS
Sbjct: 192 KLLS 195
>gi|359489230|ref|XP_002275629.2| PREDICTED: transcription factor UNE10-like [Vitis vinifera]
Length = 465
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/51 (56%), Positives = 39/51 (76%), Gaps = 1/51 (1%)
Query: 360 HSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVE 410
H+ +ER RR+KI++RMK LQ LVP +K T KA MLDE+I Y++ LQ QV+
Sbjct: 287 HNQSERKRRDKINQRMKTLQKLVPNSSK-TDKASMLDEVIEYLKQLQAQVQ 336
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.308 0.124 0.347
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,444,994,940
Number of Sequences: 23463169
Number of extensions: 353949297
Number of successful extensions: 1670412
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 1505
Number of HSP's successfully gapped in prelim test: 7706
Number of HSP's that attempted gapping in prelim test: 1559176
Number of HSP's gapped (non-prelim): 64771
length of query: 553
length of database: 8,064,228,071
effective HSP length: 148
effective length of query: 405
effective length of database: 8,886,646,355
effective search space: 3599091773775
effective search space used: 3599091773775
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 80 (35.4 bits)