BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 044654
(68 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9SJ24|EC12_ARATH Egg cell-secreted protein 1.2 OS=Arabidopsis thaliana GN=EC1.2
PE=2 SV=1
Length = 125
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 41/80 (51%), Gaps = 13/80 (16%)
Query: 1 MALKHVFFILALTFLIMANLQMQP-PEMIASTT------------CWNVLMNLKSCSNEI 47
MA F + L++ N+ + PE ST CWN L LKSC+NEI
Sbjct: 1 MASNTSFLFATIAILLVLNISGRTLPETEDSTNIAARLNGGGLMECWNALYELKSCTNEI 60
Query: 48 VIFFLNSQADIGPDCCRVID 67
V+FFLN + +G DCC+ ++
Sbjct: 61 VLFFLNGETKLGVDCCQAVE 80
>sp|Q9SJ23|EC13_ARATH Egg cell-secreted protein 1.3 OS=Arabidopsis thaliana GN=EC1.3
PE=2 SV=1
Length = 125
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 41/80 (51%), Gaps = 13/80 (16%)
Query: 1 MALKHVFFILALTFLIMANLQMQPPEMIASTT-------------CWNVLMNLKSCSNEI 47
MA F + +T L++ N+ + +A +T CW+ L LKSC+NEI
Sbjct: 1 MASNTSFLFVTVTLLLVLNVSSRALPPVADSTNIAARLTGGGLMQCWDALYELKSCTNEI 60
Query: 48 VIFFLNSQADIGPDCCRVID 67
V+FFLN + +G CC +D
Sbjct: 61 VLFFLNGETKLGYGCCNAVD 80
>sp|Q9T039|EC14_ARATH Egg cell-secreted protein 1.4 OS=Arabidopsis thaliana GN=EC1.4
PE=2 SV=1
Length = 127
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 20/35 (57%), Positives = 25/35 (71%)
Query: 33 CWNVLMNLKSCSNEIVIFFLNSQADIGPDCCRVID 67
CWN L LKSC+NEIV+FFLN + +G CC +D
Sbjct: 48 CWNALYELKSCTNEIVLFFLNGETKLGVSCCESVD 82
>sp|Q9SRD8|EC11_ARATH Egg cell-secreted protein 1.1 OS=Arabidopsis thaliana GN=EC1.1
PE=2 SV=1
Length = 158
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 18/34 (52%), Positives = 24/34 (70%)
Query: 33 CWNVLMNLKSCSNEIVIFFLNSQADIGPDCCRVI 66
CW+ LM L+ CS E+++FFLN + IGP CC I
Sbjct: 57 CWDSLMQLQHCSGELILFFLNGETYIGPGCCSAI 90
>sp|Q9FGG1|EC15_ARATH Egg cell-secreted protein 1.5 OS=Arabidopsis thaliana GN=EC1.5
PE=2 SV=1
Length = 155
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 23/42 (54%), Gaps = 8/42 (19%)
Query: 33 CWNVLMNLKSCSNEIVIFFLNS--------QADIGPDCCRVI 66
CWN + LKSC++EIV FFL+ + I DCC I
Sbjct: 53 CWNAGLELKSCTDEIVKFFLSQTGTSEPPVKGGIDKDCCGAI 94
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.332 0.139 0.450
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 20,179,032
Number of Sequences: 539616
Number of extensions: 495392
Number of successful extensions: 1503
Number of sequences better than 100.0: 5
Number of HSP's better than 100.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 1498
Number of HSP's gapped (non-prelim): 5
length of query: 68
length of database: 191,569,459
effective HSP length: 40
effective length of query: 28
effective length of database: 169,984,819
effective search space: 4759574932
effective search space used: 4759574932
T: 11
A: 40
X1: 15 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 39 (21.5 bits)
S2: 55 (25.8 bits)