Query 044658
Match_columns 364
No_of_seqs 206 out of 1218
Neff 9.4
Searched_HMMs 29240
Date Mon Mar 25 09:09:51 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/044658.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/044658hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2i68_A Protein EMRE; transmemb 99.1 1.4E-10 4.9E-15 91.6 6.0 71 254-324 34-105 (137)
2 3b5d_A Multidrug transporter E 98.8 7.5E-08 2.6E-12 73.3 11.7 70 255-324 35-105 (110)
3 3b5d_A Multidrug transporter E 98.6 3.1E-07 1E-11 69.9 9.1 69 77-151 34-103 (110)
4 2i68_A Protein EMRE; transmemb 98.4 2.3E-07 7.9E-12 73.2 4.2 69 77-151 34-103 (137)
5 3rko_J NADH-quinone oxidoreduc 37.3 1.6E+02 0.0055 23.7 12.4 32 291-322 127-160 (184)
6 3l1l_A Arginine/agmatine antip 26.3 1.3E+02 0.0043 27.4 6.7 42 284-326 388-430 (445)
7 2zxe_G FXYD10, phospholemman-l 16.8 71 0.0024 21.4 1.9 20 307-326 25-44 (74)
8 2jo1_A Phospholemman; FXYD1, N 16.0 46 0.0016 22.1 0.8 18 307-324 22-39 (72)
9 3b9w_A Ammonium transporter fa 9.1 1E+03 0.035 21.6 19.1 325 6-364 39-388 (407)
10 3b9w_A Ammonium transporter fa 8.8 1.1E+03 0.036 21.5 15.8 187 47-268 151-342 (407)
No 1
>2i68_A Protein EMRE; transmembrane protein, small-multidrug resistance, transporter, homodimer, dual topology, transport protein; NMR {Escherichia coli}
Probab=99.07 E-value=1.4e-10 Score=91.61 Aligned_cols=71 Identities=8% Similarity=0.156 Sum_probs=54.3
Q ss_pred HHHHhhhHHHHHHHHHHHhccCcceehcc-hhhhHHHHHHHHHHHhcCCccchhhHHHHHHHHhhhhheecC
Q 044658 254 YSGVVGSGLCYVGMAWCVEQRGPVFTSAF-TPLIQIFVAIVGFFILHERIYPGSVVGSIIVVIGLYILLWGK 324 (364)
Q Consensus 254 ~~~~~~~~~~~~~~~~a~~~~~~~~~s~~-~~l~pv~~~~~~~~~l~e~~~~~~~~G~~li~~g~~l~~~~~ 324 (364)
.++++++++++.++.+++++.+++.+..+ ..+.|+++++++++++||++++.+++|+++|++|+++....+
T Consensus 34 ~l~i~~~~ls~~l~~~alk~i~~s~ay~iw~~l~pv~~~l~g~l~lgE~ls~~~~~Gi~LIi~GV~ll~~~~ 105 (137)
T 2i68_A 34 VGTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLIINLLS 105 (137)
T ss_dssp CHHHHHHHHHHHHHHHHHC-----CHHHHHHHHHHHHHHHHHHHHHC------CHHHHHHHHHHHHHHHHC-
T ss_pred HHHHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcCC
Confidence 35667889999999999999999999998 899999999999999999999999999999999999987644
No 2
>3b5d_A Multidrug transporter EMRE; helical membrane protein, multidrug resistance transporter, SMR, antiport, inner membrane, transmembrane; HET: P4P; 3.80A {Escherichia coli K12} PDB: 3b61_A 3b62_A*
Probab=98.79 E-value=7.5e-08 Score=73.33 Aligned_cols=70 Identities=9% Similarity=0.164 Sum_probs=64.3
Q ss_pred HHHhhhHHHHHHHHHHHhccCcceehcc-hhhhHHHHHHHHHHHhcCCccchhhHHHHHHHHhhhhheecC
Q 044658 255 SGVVGSGLCYVGMAWCVEQRGPVFTSAF-TPLIQIFVAIVGFFILHERIYPGSVVGSIIVVIGLYILLWGK 324 (364)
Q Consensus 255 ~~~~~~~~~~~~~~~a~~~~~~~~~s~~-~~l~pv~~~~~~~~~l~e~~~~~~~~G~~li~~g~~l~~~~~ 324 (364)
.++++..+++.++.+++|+.+.+.+..+ ..+.|+++.+++++++||++++.+++|+.+|++|+++....+
T Consensus 35 ~~~~~~~~~~~~~~~al~~~p~s~ay~i~~g~~~v~~~l~~~~~~~E~~s~~~~~Gi~lIi~Gv~~l~~~~ 105 (110)
T 3b5d_A 35 GTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLIINLLS 105 (110)
T ss_pred HHHHHHHHHHHHHHHHHHhCChhhHHHHHhhHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcCC
Confidence 5556788999999999999999999888 899999999999999999999999999999999999987643
No 3
>3b5d_A Multidrug transporter EMRE; helical membrane protein, multidrug resistance transporter, SMR, antiport, inner membrane, transmembrane; HET: P4P; 3.80A {Escherichia coli K12} PDB: 3b61_A 3b62_A*
Probab=98.56 E-value=3.1e-07 Score=69.92 Aligned_cols=69 Identities=16% Similarity=0.302 Sum_probs=63.0
Q ss_pred HHHHHHHHHHHHHHHHhccccCcceeehc-ccchhHHHHHHhhhhccccccccccccccchhHHHHHHhhhhhhee
Q 044658 77 FSALTGVTLAQYFFLLGFEYTTAAFSCAF-INIVPVSTFLLALPFRLEKLNMKSLDGRSKVLGAIVCIGGALTLTL 151 (364)
Q Consensus 77 ~~g~~~~~~~~~~~~~al~~~~~~~~~~l-~~~~pi~~~ll~~~~l~e~~~~~~~~~~~~~~gi~~~~~Gv~li~~ 151 (364)
..+++...+++.++.+++++.|.+.+..+ ..+.|++++++++++++|+++..+ ++|+.+++.|+.++..
T Consensus 34 ~~~~~~~~~~~~~~~~al~~~p~s~ay~i~~g~~~v~~~l~~~~~~~E~~s~~~------~~Gi~lIi~Gv~~l~~ 103 (110)
T 3b5d_A 34 VGTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPA------IIGMMLICAGVLIINL 103 (110)
T ss_pred HHHHHHHHHHHHHHHHHHHhCChhhHHHHHhhHHHHHHHHHHHHHhCCCCCHHH------HHHHHHHHHHHHHHhc
Confidence 34555558899999999999999999888 799999999999999999999999 9999999999999974
No 4
>2i68_A Protein EMRE; transmembrane protein, small-multidrug resistance, transporter, homodimer, dual topology, transport protein; NMR {Escherichia coli}
Probab=98.37 E-value=2.3e-07 Score=73.15 Aligned_cols=69 Identities=16% Similarity=0.302 Sum_probs=52.6
Q ss_pred HHHHHHHHHHHHHHHHhccccCcceeehc-ccchhHHHHHHhhhhccccccccccccccchhHHHHHHhhhhhhee
Q 044658 77 FSALTGVTLAQYFFLLGFEYTTAAFSCAF-INIVPVSTFLLALPFRLEKLNMKSLDGRSKVLGAIVCIGGALTLTL 151 (364)
Q Consensus 77 ~~g~~~~~~~~~~~~~al~~~~~~~~~~l-~~~~pi~~~ll~~~~l~e~~~~~~~~~~~~~~gi~~~~~Gv~li~~ 151 (364)
+.+++...+++.++.+++++.+++.+..+ .++.|++++++++++++|+++..+ ++|+.++++|++++..
T Consensus 34 ~l~i~~~~ls~~l~~~alk~i~~s~ay~iw~~l~pv~~~l~g~l~lgE~ls~~~------~~Gi~LIi~GV~ll~~ 103 (137)
T 2i68_A 34 VGTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPA------IIGMMLICAGVLIINL 103 (137)
T ss_dssp CHHHHHHHHHHHHHHHHHC-----CHHHHHHHHHHHHHHHHHHHHHC------C------HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHhCCCCCHHH------HHHHHHHHHHHHHHhc
Confidence 35555568999999999999999999888 899999999999999999999999 9999999999999975
No 5
>3rko_J NADH-quinone oxidoreductase subunit J; complex I, proton pump, membrane protein, Na ubiquinone, cytoplasmic membrane; HET: LFA CA7; 3.00A {Escherichia coli}
Probab=37.28 E-value=1.6e+02 Score=23.65 Aligned_cols=32 Identities=6% Similarity=0.155 Sum_probs=23.4
Q ss_pred HHHHHHHhcCCccchhhHHHHHHH--Hhhhhhee
Q 044658 291 AIVGFFILHERIYPGSVVGSIIVV--IGLYILLW 322 (364)
Q Consensus 291 ~~~~~~~l~e~~~~~~~~G~~li~--~g~~l~~~ 322 (364)
--+|..++++-.-+.++.+.++.+ +|.+...+
T Consensus 127 ~~iG~~Lft~Y~lpFElaSvlLLvAmIGAIvLar 160 (184)
T 3rko_J 127 KAVGITLFGPYVLAVELASMLLLAGLVVAFHVGR 160 (184)
T ss_dssp HHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 467788899998899999988865 34444443
No 6
>3l1l_A Arginine/agmatine antiporter; TCDB 2.A.3.2.5, ADIC, Arg-bound, amino-acid transport, cell inner membrane, cell membrane, membrane; HET: ARG BNG; 3.00A {Escherichia coli} PDB: 3h5m_A* 3h6b_A 3lrb_A 3lrc_A 3ob6_A* 3hqk_A 3ncy_A
Probab=26.30 E-value=1.3e+02 Score=27.41 Aligned_cols=42 Identities=0% Similarity=-0.015 Sum_probs=22.3
Q ss_pred hhhHHHHHHHHHHHh-cCCccchhhHHHHHHHHhhhhheecCcc
Q 044658 284 PLIQIFVAIVGFFIL-HERIYPGSVVGSIIVVIGLYILLWGKSK 326 (364)
Q Consensus 284 ~l~pv~~~~~~~~~l-~e~~~~~~~~G~~li~~g~~l~~~~~~~ 326 (364)
..-++++.++..+.+ ...+ ...+.|.++++.|+.++...+++
T Consensus 388 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~g~~~y~~~~~~ 430 (445)
T 3l1l_A 388 LAVTTIAFLYCIWAVVGSGA-KEVMWSFVTLMVITAMYALNYNR 430 (445)
T ss_dssp HHHHHHHHHHHHHHHHHSCH-HHHHHHHHHHHHHHHHHHHHHST
T ss_pred HHHHHHHHHHHHHHHHHcCH-HHHHHHHHHHHHHHHHHHHHhhh
Confidence 344444444443332 2222 23456777788888777655444
No 7
>2zxe_G FXYD10, phospholemman-like protein; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_G*
Probab=16.78 E-value=71 Score=21.36 Aligned_cols=20 Identities=45% Similarity=0.851 Sum_probs=12.1
Q ss_pred hHHHHHHHHhhhhheecCcc
Q 044658 307 VVGSIIVVIGLYILLWGKSK 326 (364)
Q Consensus 307 ~~G~~li~~g~~l~~~~~~~ 326 (364)
+++.++.+.|++++...|-+
T Consensus 25 ifA~vLfi~GI~iilS~kcr 44 (74)
T 2zxe_G 25 IVAAVLCVIGIIILLAGKCR 44 (74)
T ss_dssp HHHHHHHHHHHHHHTTTC--
T ss_pred hhHHHHHHHHHHHHHcCccc
Confidence 45566677787777665443
No 8
>2jo1_A Phospholemman; FXYD1, Na,K-ATPase, micelle, hydrolase regulator; NMR {Homo sapiens}
Probab=16.04 E-value=46 Score=22.06 Aligned_cols=18 Identities=28% Similarity=0.700 Sum_probs=10.9
Q ss_pred hHHHHHHHHhhhhheecC
Q 044658 307 VVGSIIVVIGLYILLWGK 324 (364)
Q Consensus 307 ~~G~~li~~g~~l~~~~~ 324 (364)
++++++.+.|++++...+
T Consensus 22 ifA~vLfi~GI~iilS~K 39 (72)
T 2jo1_A 22 VIAGILFILGILIVLSRR 39 (72)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCc
Confidence 455566667777766543
No 9
>3b9w_A Ammonium transporter family; membrane protein, ammonia transport, rhesus protein, transpo protein; HET: BOG; 1.30A {Nitrosomonas europaea} PDB: 3bhs_A 3b9y_A* 3b9z_A*
Probab=9.06 E-value=1e+03 Score=21.57 Aligned_cols=325 Identities=11% Similarity=-0.034 Sum_probs=0.0
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHH------hcCCChHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCHHHHHHHHHHH
Q 044658 6 QWKPIIMMVAVNLGLAAANALLKKIL------DGGLNHLVIVAYRQIIATIFLAPVAYFWERKSRPKLTVPILCQLFFSA 79 (364)
Q Consensus 6 ~~~~~l~~~l~~~~~~~~~~~~k~~~------~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g 79 (364)
++.++-.+....++-+......=... +..++.....+.+..++.....++....-.|.+. .......++..
T Consensus 39 rk~~~s~v~~n~l~~a~~~QW~~l~~~~Gf~~~g~ip~~~~~~fq~~Faa~t~~IvsGAvaeR~kf---~~~li~~~~~~ 115 (407)
T 3b9w_A 39 RRYGFSATTGTYLVVATGLPLYILLRANGIFGHALTPHSVDAVIYAEFAVATGLIAMGAVLGRLRV---FQYALLALFIV 115 (407)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHHHHHHTTTTSSCCCSSSHHHHHHHHHHHHHHHHHHHHHTTSSCH---HHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCCcchHHHHHHHHHHHHHHHHHHHHHHHhhcccH---HHHHHHHHHHH
Q ss_pred HHHHHHHHHHH----HHhccccCcceeehcccchhHHHHHHhhhhccccccccccccccchhHHHHHHhhhhhheeccCC
Q 044658 80 LTGVTLAQYFF----LLGFEYTTAAFSCAFINIVPVSTFLLALPFRLEKLNMKSLDGRSKVLGAIVCIGGALTLTLYKGK 155 (364)
Q Consensus 80 ~~~~~~~~~~~----~~al~~~~~~~~~~l~~~~pi~~~ll~~~~l~e~~~~~~~~~~~~~~gi~~~~~Gv~li~~~~~~ 155 (364)
.+.....+..+ ..-....+-+-..++....-......++++-+++-....+ + ..--...+..+|..++- =.
T Consensus 116 ~vY~~~~~wvw~gG~~~~~G~~DfAGs~vVH~~gG~~aLa~a~~LG~R~~~~~~~-~-~~~hn~~~~~lGt~lLW---~G 190 (407)
T 3b9w_A 116 PVYLLNEWLVLDNASGLTEGFQDSAGSIAIHAFGAYFGLGVSIALTTAAQRAQPI-E-SDATSDRFSMLGSMVLW---LF 190 (407)
T ss_dssp HHHHHHHHHHTTCTTSSCTTCCCTTCTTTTHHHHHHHHHHHHHHHCCHHHHTSCC-C-CCHHHHHHHHHHHHHHH---HH
T ss_pred HhccceeEEEeCCcchhhcceeeccCceEEEeCchHHHHHHHHHhcCccccCCCC-c-CCCCCHHHHHHHHHHHH---HH
Q ss_pred cccccccccccccccccCCCCCCCCchHHHHHHHHHHHHHHhHHHHHHHHhccCCCchhHHHHHHHHHHHHHHHHHHHhh
Q 044658 156 PFYLGATNHMTNDVNTMNSSKKADDWAIGSIVLIAFTVVWSSWFLIQARIGKKYPCKYSSTAIMALFGAIQSAVLSLIVE 235 (364)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (364)
...+ |.+...+.......+-..+|+.+-++......+..++.........-..+.+.+...+.+-...
T Consensus 191 WfGF------------N~Gl~~~~~~~~a~~NT~lAaaag~l~~~~~~~~~~~gK~~~~~~~nG~LAGLVAITa~~~~v~ 258 (407)
T 3b9w_A 191 WPSF------------ATAIVPFEQMPQTIVNTLLALCGATLATYFLSALFHKGKASIVDMANAALAGGVAIGSVCNIVG 258 (407)
T ss_dssp HHHH------------HHTTSCGGGHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCCHHHHHHHTTHHHHHHTTTTTTSC
T ss_pred HHhh------------hhhhccchhhHHHHHHhHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHhhhhhhheeccCCCCCC
Q ss_pred cCCCcccccchhhHHHHHHHHHhhhHHHHHHHHHH-------HhccCcceehcchhhhHHHHHHHHHHHhcCCccchhhH
Q 044658 236 RNPAGWAMKGKLEIITIIYSGVVGSGLCYVGMAWC-------VEQRGPVFTSAFTPLIQIFVAIVGFFILHERIYPGSVV 308 (364)
Q Consensus 236 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a-------~~~~~~~~~s~~~~l~pv~~~~~~~~~l~e~~~~~~~~ 308 (364)
. +.-+.+|+++..+++..+.+- ++.=++.-+-.+--.--+++.+..- ++....+..|++
T Consensus 259 p-------------~~A~iIG~iaG~i~~~~~~~l~~~l~~~l~iDD~l~a~~vHgv~Gi~G~l~~g-lfa~~~~~~Ql~ 324 (407)
T 3b9w_A 259 P-------------VGAFVIGLLGGAISVVGFVFIQPMLESKAKTIDTCGVHNLHGLPGLLGGFSAI-LIVPGIAVAQLT 324 (407)
T ss_dssp H-------------HHHHHHHHHHHHHHHHHHHTHHHHHHHHSCCCCTTCHHHHTTHHHHHHHHHHH-HHSTTCHHHHHH
T ss_pred H-------------HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCeecchHHHHHHHHHHH-HHccCCcHHHHH
Q ss_pred HHHHH----HHhhhhheecCccccchhhhhcccccCCCCCCCCCCCCCccceec----cCCCCC
Q 044658 309 GSIIV----VIGLYILLWGKSKEIDECQGMKQAQLAPQDGHFDAVSPSHVIPVA----MDSSKP 364 (364)
Q Consensus 309 G~~li----~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~ 364 (364)
|.+.+ +++.++..+--+++.+++++.+.+..=+-+..+..+..++..|+. .|.+|.
T Consensus 325 g~~~~~~~s~v~~~i~~~il~~r~~~e~e~~g~~~we~p~ld~~~hg~~ayp~~~~~~~~~~~~ 388 (407)
T 3b9w_A 325 GIGITLALALIGGVIAGALIKLTGTTKQAYEDSHEFIHLAGPEDEHKAERLVLEAKTEIQGLKN 388 (407)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCCCSSTTCGGGTSSSCCCGGGC-------------------
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCCHHHHcCCcccccCccccHHHhchhhccchhhhhcccccc
No 10
>3b9w_A Ammonium transporter family; membrane protein, ammonia transport, rhesus protein, transpo protein; HET: BOG; 1.30A {Nitrosomonas europaea} PDB: 3bhs_A 3b9y_A* 3b9z_A*
Probab=8.77 E-value=1.1e+03 Score=21.49 Aligned_cols=187 Identities=9% Similarity=-0.132 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhccccCcceeehcccchhHHHHHHhhhhccc--c
Q 044658 47 IATIFLAPVAYFWERKSRPKLTVPILCQLFFSALTGVTLAQYFFLLGFEYTTAAFSCAFINIVPVSTFLLALPFRLE--K 124 (364)
Q Consensus 47 ~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~ll~~~~l~e--~ 124 (364)
.+.+....+...|.++..++..+..-..+..+|.+..-.++..++-++........++++...-.-...+.+++..+ +
T Consensus 151 ~~aLa~a~~LG~R~~~~~~~~~~~hn~~~~~lGt~lLW~GWfGFN~Gl~~~~~~~~a~~NT~lAaaag~l~~~~~~~~~~ 230 (407)
T 3b9w_A 151 YFGLGVSIALTTAAQRAQPIESDATSDRFSMLGSMVLWLFWPSFATAIVPFEQMPQTIVNTLLALCGATLATYFLSALFH 230 (407)
T ss_dssp HHHHHHHHHHCCHHHHTSCCCCCHHHHHHHHHHHHHHHHHHHHHHHTTSCGGGHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHhcCccccCCCCcCCCCCHHHHHHHHHHHHHHHHhhhhhhccchhhHHHHHHhHHHHHHHHHHHHHHHHHHh
Q ss_pred ccccccccccchhHHHHHHhhhhhheeccCCcccccccccccccccccCCCCCCCCchHHHHHHHHHHHHHHhHHHHHHH
Q 044658 125 LNMKSLDGRSKVLGAIVCIGGALTLTLYKGKPFYLGATNHMTNDVNTMNSSKKADDWAIGSIVLIAFTVVWSSWFLIQAR 204 (364)
Q Consensus 125 ~~~~~~~~~~~~~gi~~~~~Gv~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~i~~k~ 204 (364)
-.+.+ ..++.-+.++-.+..-......+. ....+..+++++..-...-..|+
T Consensus 231 ~gK~~------~~~~~nG~LAGLVAITa~~~~v~p----------------------~~A~iIG~iaG~i~~~~~~~l~~ 282 (407)
T 3b9w_A 231 KGKAS------IVDMANAALAGGVAIGSVCNIVGP----------------------VGAFVIGLLGGAISVVGFVFIQP 282 (407)
T ss_dssp TTCCC------HHHHHHHTTHHHHHHTTTTTTSCH----------------------HHHHHHHHHHHHHHHHHHHTHHH
T ss_pred CCCCC------HHHHHHhhhhhhheeccCCCCCCH----------------------HHHHHHHHHHHHHHHHHHHHHHH
Q ss_pred Hh---ccCCCchhHHHHHHHHHHHHHHHHHHHhhcCCCcccccchhhHHHHHHHHHhhhHHHHHHHH
Q 044658 205 IG---KKYPCKYSSTAIMALFGAIQSAVLSLIVERNPAGWAMKGKLEIITIIYSGVVGSGLCYVGMA 268 (364)
Q Consensus 205 ~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 268 (364)
.. -+.+|+..........+..-.+...++.... ...+...++.....+...++..+.
T Consensus 283 ~l~~~l~iDD~l~a~~vHgv~Gi~G~l~~glfa~~~-------~~~Ql~g~~~~~~~s~v~~~i~~~ 342 (407)
T 3b9w_A 283 MLESKAKTIDTCGVHNLHGLPGLLGGFSAILIVPGI-------AVAQLTGIGITLALALIGGVIAGA 342 (407)
T ss_dssp HHHHHSCCCCTTCHHHHTTHHHHHHHHHHHHHSTTC-------HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHhcCCCCCCCCCeecchHHHHHHHHHHHHHccCC-------cHHHHHHHHHHHHHHHHHHHHHHH
Done!