Query 044659
Match_columns 169
No_of_seqs 103 out of 1527
Neff 10.2
Searched_HMMs 46136
Date Fri Mar 29 05:27:08 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/044659.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/044659hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02965 Probable pheophorbida 99.9 1.5E-24 3.2E-29 157.5 16.0 162 3-169 24-238 (255)
2 PLN02385 hydrolase; alpha/beta 99.9 3.7E-23 8E-28 156.5 14.6 162 3-169 109-326 (349)
3 PF12697 Abhydrolase_6: Alpha/ 99.9 6.7E-24 1.4E-28 149.4 9.8 160 3-169 19-221 (228)
4 TIGR03343 biphenyl_bphD 2-hydr 99.9 5.9E-23 1.3E-27 150.7 15.1 159 5-169 56-268 (282)
5 PRK00870 haloalkane dehalogena 99.9 4.3E-23 9.4E-28 153.2 13.3 161 3-169 67-286 (302)
6 PLN02824 hydrolase, alpha/beta 99.9 1.2E-22 2.7E-27 150.2 14.3 159 4-169 51-279 (294)
7 PLN02298 hydrolase, alpha/beta 99.9 1.8E-22 3.9E-27 151.6 14.5 161 3-168 81-297 (330)
8 PHA02857 monoglyceride lipase; 99.9 1.7E-22 3.8E-27 148.0 13.0 162 2-169 45-255 (276)
9 PRK10673 acyl-CoA esterase; Pr 99.9 5E-22 1.1E-26 143.8 13.9 156 8-169 41-240 (255)
10 TIGR02240 PHA_depoly_arom poly 99.9 7.5E-22 1.6E-26 144.8 14.5 154 9-169 51-251 (276)
11 PRK10349 carboxylesterase BioH 99.9 1.3E-21 2.9E-26 141.9 14.6 155 4-169 35-241 (256)
12 PRK10749 lysophospholipase L2; 99.9 2E-21 4.3E-26 146.1 15.1 160 4-169 76-311 (330)
13 TIGR03056 bchO_mg_che_rel puta 99.9 2.2E-21 4.7E-26 141.7 14.6 157 4-169 50-265 (278)
14 PRK03204 haloalkane dehalogena 99.9 1.4E-21 3E-26 144.2 13.5 156 8-169 59-273 (286)
15 TIGR03611 RutD pyrimidine util 99.9 1.9E-21 4.1E-26 140.0 13.8 157 7-169 37-243 (257)
16 PRK11126 2-succinyl-6-hydroxy- 99.9 2.3E-21 5.1E-26 139.3 13.3 150 9-169 27-227 (242)
17 PLN03087 BODYGUARD 1 domain co 99.9 3.9E-21 8.5E-26 149.5 15.4 155 7-167 230-461 (481)
18 TIGR02427 protocat_pcaD 3-oxoa 99.9 4.4E-21 9.5E-26 137.2 13.5 156 8-169 38-238 (251)
19 PRK03592 haloalkane dehalogena 99.9 1.5E-21 3.3E-26 144.4 11.4 160 3-169 48-274 (295)
20 TIGR01250 pro_imino_pep_2 prol 99.9 1.4E-20 3.1E-25 137.3 16.3 160 4-169 48-275 (288)
21 PLN02679 hydrolase, alpha/beta 99.9 5.8E-21 1.3E-25 145.1 14.3 160 4-169 110-342 (360)
22 PRK07581 hypothetical protein; 99.9 6.6E-21 1.4E-25 143.7 14.4 160 4-169 66-321 (339)
23 PLN02211 methyl indole-3-aceta 99.9 2.5E-20 5.4E-25 136.7 16.4 159 3-169 39-255 (273)
24 PF00561 Abhydrolase_1: alpha/ 99.9 3.7E-21 7.9E-26 136.6 11.5 154 10-169 1-220 (230)
25 TIGR01738 bioH putative pimelo 99.9 2.1E-20 4.5E-25 133.3 13.7 152 8-169 29-233 (245)
26 KOG4178 Soluble epoxide hydrol 99.9 2.1E-20 4.6E-25 136.1 13.1 160 4-169 66-305 (322)
27 COG1647 Esterase/lipase [Gener 99.8 9E-21 2E-25 130.6 9.9 162 1-168 34-227 (243)
28 TIGR03695 menH_SHCHC 2-succiny 99.8 3.6E-20 7.8E-25 132.1 13.5 159 4-169 23-238 (251)
29 PRK13604 luxD acyl transferase 99.8 9.1E-20 2E-24 133.7 14.2 158 2-166 57-246 (307)
30 PRK08775 homoserine O-acetyltr 99.8 4.4E-20 9.5E-25 139.5 12.4 155 8-169 98-324 (343)
31 PLN02578 hydrolase 99.8 1.6E-19 3.4E-24 137.0 14.8 155 8-169 111-340 (354)
32 PRK06489 hypothetical protein; 99.8 1.3E-19 2.7E-24 137.8 14.0 154 7-166 103-340 (360)
33 PLN03084 alpha/beta hydrolase 99.8 2.6E-19 5.6E-24 136.5 15.5 158 4-169 149-369 (383)
34 TIGR01392 homoserO_Ac_trn homo 99.8 7.2E-20 1.6E-24 138.7 12.4 74 5-84 68-161 (351)
35 TIGR01249 pro_imino_pep_1 prol 99.8 1.3E-19 2.9E-24 134.9 13.3 158 5-168 49-292 (306)
36 COG2267 PldB Lysophospholipase 99.8 1.4E-19 3.1E-24 133.8 13.0 163 2-169 54-276 (298)
37 KOG4409 Predicted hydrolase/ac 99.8 4.1E-19 8.9E-24 130.1 14.4 71 9-85 116-195 (365)
38 KOG1454 Predicted hydrolase/ac 99.8 1.5E-19 3.2E-24 135.2 12.1 157 7-169 84-309 (326)
39 KOG1455 Lysophospholipase [Lip 99.8 2.4E-19 5.3E-24 129.0 12.1 160 2-167 75-291 (313)
40 PLN02652 hydrolase; alpha/beta 99.8 7.5E-19 1.6E-23 134.6 15.3 165 2-168 156-370 (395)
41 PLN02511 hydrolase 99.8 3E-19 6.5E-24 136.9 12.4 165 4-169 124-344 (388)
42 PRK10985 putative hydrolase; P 99.8 1.4E-18 3E-23 130.4 15.3 164 3-168 81-299 (324)
43 PRK14875 acetoin dehydrogenase 99.8 1.6E-18 3.4E-23 131.9 14.1 152 9-169 157-356 (371)
44 PRK00175 metX homoserine O-ace 99.8 2.4E-18 5.1E-23 131.6 13.4 72 7-84 89-181 (379)
45 PLN02894 hydrolase, alpha/beta 99.8 1.3E-17 2.9E-22 128.3 16.6 158 5-169 128-370 (402)
46 TIGR03100 hydr1_PEP hydrolase, 99.8 3.2E-18 6.9E-23 125.7 12.5 160 2-168 50-258 (274)
47 KOG2984 Predicted hydrolase [G 99.8 2.2E-18 4.8E-23 117.5 8.7 150 9-167 71-259 (277)
48 TIGR01607 PST-A Plasmodium sub 99.8 8.6E-18 1.9E-22 126.4 12.0 166 2-168 67-316 (332)
49 PRK05077 frsA fermentation/res 99.8 5.8E-17 1.3E-21 125.1 16.3 152 3-161 216-392 (414)
50 TIGR01838 PHA_synth_I poly(R)- 99.8 2.5E-17 5.4E-22 129.6 13.9 162 2-169 213-460 (532)
51 PLN02980 2-oxoglutarate decarb 99.7 2.5E-17 5.4E-22 144.0 14.2 155 9-169 1397-1624(1655)
52 PRK05855 short chain dehydroge 99.7 2E-17 4.3E-22 132.5 12.7 64 3-67 46-113 (582)
53 KOG1552 Predicted alpha/beta h 99.7 2.5E-17 5.5E-22 116.4 9.1 140 8-165 87-234 (258)
54 PRK10566 esterase; Provisional 99.7 2.5E-16 5.5E-21 113.8 13.2 157 2-166 47-234 (249)
55 PRK11071 esterase YqiA; Provis 99.7 1.8E-16 3.9E-21 110.4 11.7 131 9-165 32-174 (190)
56 PF00326 Peptidase_S9: Prolyl 99.7 2E-16 4.3E-21 112.0 11.9 155 3-166 8-190 (213)
57 PF12695 Abhydrolase_5: Alpha/ 99.7 2.8E-16 6E-21 104.4 11.5 121 2-164 19-145 (145)
58 PRK06765 homoserine O-acetyltr 99.7 1.3E-15 2.7E-20 116.6 13.4 72 6-83 96-194 (389)
59 TIGR01836 PHA_synth_III_C poly 99.7 1.6E-15 3.5E-20 115.0 11.8 76 2-85 87-171 (350)
60 COG0429 Predicted hydrolase of 99.6 1.4E-14 3E-19 106.0 11.2 165 2-168 97-319 (345)
61 KOG4667 Predicted esterase [Li 99.6 1.8E-14 4E-19 99.3 11.1 155 2-166 55-241 (269)
62 KOG2382 Predicted alpha/beta h 99.6 1E-13 2.2E-18 101.4 12.9 156 7-169 78-298 (315)
63 COG3208 GrsT Predicted thioest 99.6 5.1E-14 1.1E-18 99.1 10.8 158 9-168 33-220 (244)
64 KOG4391 Predicted alpha/beta h 99.5 7.9E-14 1.7E-18 96.4 8.3 151 5-166 102-265 (300)
65 TIGR03101 hydr2_PEP hydrolase, 99.5 1.7E-13 3.6E-18 99.8 9.1 79 3-87 50-136 (266)
66 TIGR02821 fghA_ester_D S-formy 99.5 1E-12 2.2E-17 96.6 13.2 154 3-167 66-259 (275)
67 PLN02872 triacylglycerol lipas 99.5 1.8E-13 3.9E-18 104.9 9.2 63 4-67 102-179 (395)
68 KOG1838 Alpha/beta hydrolase [ 99.5 1.4E-12 3.1E-17 98.5 13.5 165 3-169 148-368 (409)
69 COG2945 Predicted hydrolase of 99.5 3.5E-13 7.5E-18 91.5 9.0 132 2-166 53-190 (210)
70 COG0596 MhpC Predicted hydrola 99.5 1.1E-12 2.5E-17 93.3 12.4 153 10-169 51-267 (282)
71 PLN02442 S-formylglutathione h 99.5 1.2E-12 2.7E-17 96.5 12.7 155 3-166 71-264 (283)
72 PRK07868 acyl-CoA synthetase; 99.5 8.2E-13 1.8E-17 112.0 12.7 46 122-167 293-341 (994)
73 COG1506 DAP2 Dipeptidyl aminop 99.4 3E-12 6.4E-17 103.7 12.6 155 3-166 417-597 (620)
74 KOG2564 Predicted acetyltransf 99.4 4.7E-13 1E-17 95.7 5.6 73 6-81 99-178 (343)
75 PF01738 DLH: Dienelactone hyd 99.4 6.8E-12 1.5E-16 89.1 11.3 133 2-167 34-192 (218)
76 PLN00021 chlorophyllase 99.4 8.8E-12 1.9E-16 93.0 11.9 142 2-169 72-245 (313)
77 TIGR01840 esterase_phb esteras 99.4 1.7E-11 3.6E-16 86.8 11.3 77 3-84 37-129 (212)
78 COG4757 Predicted alpha/beta h 99.3 4.3E-12 9.3E-17 88.6 7.7 158 2-165 50-263 (281)
79 PF06342 DUF1057: Alpha/beta h 99.3 7.1E-11 1.5E-15 85.1 14.0 80 1-85 54-137 (297)
80 PRK11460 putative hydrolase; P 99.3 1.3E-10 2.8E-15 83.5 12.6 82 49-166 103-194 (232)
81 PRK05371 x-prolyl-dipeptidyl a 99.2 4.7E-10 1E-14 92.6 13.7 80 2-86 272-374 (767)
82 PF06821 Ser_hydrolase: Serine 99.2 1E-10 2.2E-15 80.0 7.9 114 30-166 38-155 (171)
83 PF06500 DUF1100: Alpha/beta h 99.2 1.1E-09 2.3E-14 83.5 13.2 154 3-162 212-390 (411)
84 TIGR01839 PHA_synth_II poly(R) 99.2 1.6E-09 3.4E-14 85.6 14.1 60 2-64 240-304 (560)
85 PF07859 Abhydrolase_3: alpha/ 99.2 5.6E-10 1.2E-14 78.7 10.6 157 5-166 25-210 (211)
86 PF08840 BAAT_C: BAAT / Acyl-C 99.1 1.4E-10 2.9E-15 82.3 6.4 113 49-166 22-164 (213)
87 TIGR03230 lipo_lipase lipoprot 99.1 2.4E-10 5.2E-15 88.3 8.2 73 9-87 73-156 (442)
88 PF02230 Abhydrolase_2: Phosph 99.1 5.9E-10 1.3E-14 79.2 9.3 105 31-166 83-201 (216)
89 PF05728 UPF0227: Uncharacteri 99.1 2.3E-09 5E-14 74.3 11.7 127 31-165 42-172 (187)
90 TIGR00976 /NonD putative hydro 99.1 1.5E-09 3.2E-14 87.1 12.1 78 3-85 47-132 (550)
91 PRK10162 acetyl esterase; Prov 99.1 3.6E-09 7.8E-14 79.4 12.5 157 7-166 110-292 (318)
92 PF09752 DUF2048: Uncharacteri 99.1 4.2E-09 9.1E-14 78.4 12.1 156 2-166 114-330 (348)
93 COG0412 Dienelactone hydrolase 99.1 4.2E-09 9.2E-14 75.7 11.8 131 2-166 47-204 (236)
94 COG3243 PhaC Poly(3-hydroxyalk 99.0 3.4E-09 7.4E-14 80.2 10.8 63 2-67 132-200 (445)
95 COG2021 MET2 Homoserine acetyl 99.0 1.2E-08 2.5E-13 76.3 12.0 71 6-82 89-179 (368)
96 COG3571 Predicted hydrolase of 98.9 3.6E-08 7.7E-13 65.6 11.5 135 2-165 36-182 (213)
97 PF03583 LIP: Secretory lipase 98.9 1.3E-08 2.9E-13 75.4 10.7 42 124-165 217-265 (290)
98 cd00707 Pancreat_lipase_like P 98.9 1.2E-09 2.5E-14 80.4 5.0 77 5-87 62-149 (275)
99 PF05448 AXE1: Acetyl xylan es 98.9 6.5E-09 1.4E-13 77.9 8.9 153 5-165 105-304 (320)
100 PRK10115 protease 2; Provision 98.9 3.8E-08 8.2E-13 80.8 13.2 154 4-164 469-653 (686)
101 PF02129 Peptidase_S15: X-Pro 98.9 1.7E-08 3.7E-13 74.1 9.9 63 5-67 53-120 (272)
102 TIGR01849 PHB_depoly_PhaZ poly 98.9 2.7E-08 5.8E-13 76.4 10.0 78 3-83 124-206 (406)
103 PF00975 Thioesterase: Thioest 98.9 4.3E-08 9.3E-13 69.9 10.3 75 9-84 27-103 (229)
104 PF06057 VirJ: Bacterial virul 98.8 1.1E-08 2.3E-13 70.2 5.7 140 2-165 22-174 (192)
105 PLN02733 phosphatidylcholine-s 98.8 1.5E-08 3.2E-13 78.8 7.0 64 2-67 114-181 (440)
106 TIGR03502 lipase_Pla1_cef extr 98.8 1.5E-08 3.3E-13 83.2 7.2 66 2-67 469-574 (792)
107 PF08538 DUF1749: Protein of u 98.8 4.5E-08 9.8E-13 71.9 8.4 158 2-166 56-283 (303)
108 COG0400 Predicted esterase [Ge 98.8 6.4E-08 1.4E-12 68.0 8.7 103 31-168 80-193 (207)
109 PF12715 Abhydrolase_7: Abhydr 98.8 1.6E-08 3.6E-13 76.2 5.9 152 2-160 153-343 (390)
110 KOG2281 Dipeptidyl aminopeptid 98.7 7.6E-08 1.7E-12 76.3 9.1 155 4-165 671-847 (867)
111 PF05677 DUF818: Chlamydia CHL 98.7 2.4E-07 5.2E-12 68.8 11.1 123 3-136 165-300 (365)
112 PF03959 FSH1: Serine hydrolas 98.7 6.6E-08 1.4E-12 68.5 7.9 110 31-168 86-205 (212)
113 COG0657 Aes Esterase/lipase [L 98.7 5.7E-07 1.2E-11 67.3 12.9 159 3-165 104-288 (312)
114 COG3545 Predicted esterase of 98.7 1.4E-07 3E-12 63.7 8.0 111 31-165 43-157 (181)
115 COG3458 Acetyl esterase (deace 98.7 1.2E-07 2.5E-12 68.2 7.3 151 6-164 106-300 (321)
116 PF02273 Acyl_transf_2: Acyl t 98.6 9.9E-07 2.1E-11 62.7 11.1 156 1-165 49-238 (294)
117 PF12146 Hydrolase_4: Putative 98.6 6.1E-08 1.3E-12 57.8 4.3 42 2-43 36-79 (79)
118 KOG2100 Dipeptidyl aminopeptid 98.6 1.9E-07 4.1E-12 77.3 8.1 150 5-166 554-728 (755)
119 PF10230 DUF2305: Uncharacteri 98.6 4.3E-06 9.4E-11 61.3 13.5 78 8-85 31-122 (266)
120 KOG4627 Kynurenine formamidase 98.6 1.2E-07 2.6E-12 65.6 4.9 153 4-168 92-251 (270)
121 KOG3043 Predicted hydrolase re 98.6 4E-07 8.7E-12 63.7 7.4 129 2-166 60-211 (242)
122 KOG2551 Phospholipase/carboxyh 98.5 1.6E-06 3.6E-11 60.6 9.3 108 31-166 88-204 (230)
123 PF03096 Ndr: Ndr family; Int 98.5 1.1E-06 2.4E-11 64.1 8.8 153 9-168 55-263 (283)
124 PF10503 Esterase_phd: Esteras 98.5 2.7E-06 5.9E-11 60.4 10.4 76 3-83 40-130 (220)
125 KOG2565 Predicted hydrolases o 98.5 7.7E-07 1.7E-11 66.7 7.6 61 9-75 188-251 (469)
126 PF12740 Chlorophyllase2: Chlo 98.5 2E-06 4.3E-11 62.2 9.5 147 2-169 37-210 (259)
127 COG4188 Predicted dienelactone 98.4 3.3E-07 7.1E-12 68.8 4.1 47 122-168 247-298 (365)
128 PRK10252 entF enterobactin syn 98.3 8.6E-06 1.9E-10 71.5 11.5 59 8-67 1093-1152(1296)
129 PF11339 DUF3141: Protein of u 98.3 1.6E-05 3.5E-10 62.2 10.9 46 122-167 293-351 (581)
130 KOG1553 Predicted alpha/beta h 98.2 5.5E-06 1.2E-10 61.8 7.1 75 6-85 265-345 (517)
131 KOG2931 Differentiation-relate 98.2 5.3E-05 1.1E-09 55.4 11.6 68 10-83 79-155 (326)
132 PRK04940 hypothetical protein; 98.2 2.9E-05 6.4E-10 53.2 9.4 98 49-165 60-163 (180)
133 KOG2112 Lysophospholipase [Lip 98.1 2.4E-05 5.3E-10 54.3 7.6 106 31-166 71-190 (206)
134 KOG1515 Arylacetamide deacetyl 98.1 0.0004 8.8E-09 52.5 14.5 159 5-167 119-313 (336)
135 PF07819 PGAP1: PGAP1-like pro 98.0 3.6E-05 7.9E-10 55.1 7.8 57 9-67 39-104 (225)
136 PF06028 DUF915: Alpha/beta hy 98.0 0.0002 4.2E-09 52.2 10.7 128 31-168 82-240 (255)
137 KOG2624 Triglyceride lipase-ch 98.0 0.00027 5.8E-09 54.6 11.8 77 3-85 100-199 (403)
138 PF10142 PhoPQ_related: PhoPQ- 97.9 0.00023 5E-09 54.3 10.5 120 31-166 152-305 (367)
139 COG4099 Predicted peptidase [G 97.9 0.00012 2.6E-09 53.8 8.4 101 7-142 224-331 (387)
140 PF08386 Abhydrolase_4: TAP-li 97.8 5.3E-05 1.2E-09 47.5 4.9 42 125-166 33-76 (103)
141 KOG4840 Predicted hydrolases o 97.8 0.00019 4.1E-09 50.7 7.3 80 3-87 60-146 (299)
142 smart00824 PKS_TE Thioesterase 97.7 0.00029 6.3E-09 48.9 8.5 58 9-67 25-83 (212)
143 COG3319 Thioesterase domains o 97.7 0.00022 4.7E-09 51.9 7.0 59 9-68 26-85 (257)
144 PF01674 Lipase_2: Lipase (cla 97.7 2.4E-05 5.1E-10 55.6 1.8 64 2-67 22-94 (219)
145 KOG1551 Uncharacterized conser 97.6 0.00044 9.5E-09 50.1 7.8 37 129-166 309-347 (371)
146 PF07224 Chlorophyllase: Chlor 97.6 0.00069 1.5E-08 49.1 8.8 79 4-86 68-158 (307)
147 COG3150 Predicted esterase [Ge 97.6 0.00024 5.2E-09 47.9 6.0 69 13-87 24-93 (191)
148 PF05990 DUF900: Alpha/beta hy 97.6 0.00018 3.9E-09 51.8 5.9 56 11-67 50-112 (233)
149 PRK10439 enterobactin/ferric e 97.6 0.0042 9.1E-08 48.5 13.6 111 34-165 269-392 (411)
150 PTZ00472 serine carboxypeptida 97.5 0.00031 6.7E-09 55.5 6.5 57 10-67 122-190 (462)
151 PF05577 Peptidase_S28: Serine 97.5 0.0003 6.6E-09 55.2 6.0 68 3-75 53-135 (434)
152 PF03403 PAF-AH_p_II: Platelet 97.5 0.00012 2.7E-09 56.3 3.7 84 49-166 228-317 (379)
153 KOG3101 Esterase D [General fu 97.4 0.00059 1.3E-08 47.9 6.2 103 49-164 141-261 (283)
154 PF01764 Lipase_3: Lipase (cla 97.4 0.00034 7.3E-09 46.0 4.9 34 33-67 49-83 (140)
155 COG2936 Predicted acyl esteras 97.4 0.00046 9.9E-09 55.2 5.7 63 4-67 75-143 (563)
156 PF02450 LCAT: Lecithin:choles 97.3 0.00037 8.1E-09 53.9 4.3 20 48-67 118-138 (389)
157 PF04301 DUF452: Protein of un 97.3 0.0027 5.8E-08 44.9 8.2 30 49-83 57-88 (213)
158 COG1075 LipA Predicted acetylt 97.2 0.00078 1.7E-08 51.1 5.6 61 5-67 82-146 (336)
159 PF00151 Lipase: Lipase; Inte 97.2 0.00016 3.5E-09 54.7 1.6 78 8-87 103-189 (331)
160 PF05057 DUF676: Putative seri 97.2 0.00045 9.8E-09 49.2 3.6 35 33-67 61-97 (217)
161 KOG2183 Prolylcarboxypeptidase 97.1 0.0011 2.5E-08 50.8 5.1 69 2-75 104-189 (492)
162 cd00741 Lipase Lipase. Lipase 97.0 0.0016 3.5E-08 43.6 4.6 19 49-67 28-47 (153)
163 PF10340 DUF2424: Protein of u 97.0 0.081 1.7E-06 40.7 14.0 77 10-87 155-237 (374)
164 COG1770 PtrB Protease II [Amin 96.9 0.023 5.1E-07 46.3 10.9 148 5-164 473-656 (682)
165 KOG2237 Predicted serine prote 96.9 0.0074 1.6E-07 48.8 8.0 65 6-75 496-571 (712)
166 KOG3975 Uncharacterized conser 96.7 0.038 8.3E-07 40.0 9.7 41 126-166 242-285 (301)
167 cd00519 Lipase_3 Lipase (class 96.7 0.0029 6.4E-08 45.2 4.2 19 49-67 128-147 (229)
168 PF11288 DUF3089: Protein of u 96.6 0.0049 1.1E-07 43.4 5.0 37 31-67 77-114 (207)
169 KOG3253 Predicted alpha/beta h 96.6 0.0054 1.2E-07 49.4 5.5 42 125-166 303-347 (784)
170 PLN02517 phosphatidylcholine-s 96.6 0.005 1.1E-07 49.7 5.4 20 48-67 212-232 (642)
171 COG3509 LpqC Poly(3-hydroxybut 96.6 0.018 4E-07 42.5 7.7 78 3-85 85-179 (312)
172 COG4782 Uncharacterized protei 96.5 0.0039 8.5E-08 47.2 4.2 57 10-67 147-210 (377)
173 PF05705 DUF829: Eukaryotic pr 96.5 0.065 1.4E-06 38.6 10.4 46 123-168 175-226 (240)
174 KOG2369 Lecithin:cholesterol a 96.5 0.0036 7.7E-08 48.9 3.7 36 31-67 165-201 (473)
175 PLN02454 triacylglycerol lipas 96.5 0.0049 1.1E-07 47.7 4.4 30 37-67 215-247 (414)
176 PLN02571 triacylglycerol lipas 96.4 0.0049 1.1E-07 47.8 4.2 36 32-67 208-245 (413)
177 COG1505 Serine proteases of th 96.4 0.022 4.8E-07 45.9 7.8 147 5-165 446-625 (648)
178 COG3946 VirJ Type IV secretory 96.3 0.0064 1.4E-07 46.7 4.4 61 2-67 280-345 (456)
179 COG2382 Fes Enterochelin ester 96.3 0.01 2.2E-07 43.9 5.0 22 49-75 177-199 (299)
180 PLN02162 triacylglycerol lipas 96.3 0.0074 1.6E-07 47.4 4.4 32 35-67 265-297 (475)
181 PLN02408 phospholipase A1 96.2 0.0076 1.6E-07 46.1 4.3 33 35-67 185-219 (365)
182 PLN00413 triacylglycerol lipas 96.2 0.009 1.9E-07 47.0 4.5 33 34-67 270-303 (479)
183 KOG3724 Negative regulator of 96.0 0.0047 1E-07 51.1 2.4 19 49-67 182-201 (973)
184 PLN02934 triacylglycerol lipas 96.0 0.011 2.5E-07 46.8 4.4 34 33-67 306-340 (515)
185 PF00756 Esterase: Putative es 95.9 0.012 2.7E-07 42.4 4.1 45 36-85 100-150 (251)
186 PLN02324 triacylglycerol lipas 95.9 0.013 2.9E-07 45.4 4.2 34 34-67 199-234 (415)
187 PLN02310 triacylglycerol lipas 95.8 0.014 3E-07 45.2 4.1 34 34-67 191-228 (405)
188 KOG3847 Phospholipase A2 (plat 95.7 0.031 6.7E-07 41.8 5.2 19 49-67 241-260 (399)
189 PF06259 Abhydrolase_8: Alpha/ 95.6 0.068 1.5E-06 36.8 6.5 37 31-67 87-128 (177)
190 PLN02753 triacylglycerol lipas 95.5 0.021 4.5E-07 45.6 4.2 34 34-67 293-331 (531)
191 PLN03037 lipase class 3 family 95.5 0.02 4.4E-07 45.6 4.1 34 34-67 300-337 (525)
192 PLN02802 triacylglycerol lipas 95.5 0.022 4.8E-07 45.2 4.2 32 36-67 316-349 (509)
193 PF07082 DUF1350: Protein of u 95.4 0.31 6.7E-06 35.4 9.5 71 2-82 40-122 (250)
194 COG4814 Uncharacterized protei 95.4 0.033 7.1E-07 40.4 4.4 45 41-86 129-177 (288)
195 COG2819 Predicted hydrolase of 95.3 0.043 9.3E-07 40.1 5.0 30 49-83 137-170 (264)
196 KOG2029 Uncharacterized conser 95.3 0.043 9.3E-07 44.3 5.3 38 30-67 505-545 (697)
197 PLN02719 triacylglycerol lipas 95.2 0.028 6E-07 44.7 4.0 33 35-67 280-317 (518)
198 cd00312 Esterase_lipase Estera 95.1 0.064 1.4E-06 42.8 6.0 58 10-67 126-195 (493)
199 PLN02761 lipase class 3 family 95.1 0.033 7.1E-07 44.4 4.1 34 34-67 274-313 (527)
200 PF11187 DUF2974: Protein of u 95.1 0.049 1.1E-06 39.0 4.6 19 49-67 84-103 (224)
201 KOG2182 Hydrolytic enzymes of 95.0 0.099 2.1E-06 41.4 6.4 68 3-75 112-194 (514)
202 COG2830 Uncharacterized protei 95.0 0.049 1.1E-06 36.8 4.1 35 132-167 170-204 (214)
203 KOG4569 Predicted lipase [Lipi 94.7 0.047 1E-06 41.6 4.0 35 32-67 155-190 (336)
204 COG4287 PqaA PhoPQ-activated p 94.6 0.092 2E-06 40.2 5.2 120 31-165 217-371 (507)
205 PF12048 DUF3530: Protein of u 94.5 0.36 7.9E-06 36.4 8.3 33 49-86 193-230 (310)
206 COG1073 Hydrolases of the alph 94.4 0.059 1.3E-06 39.3 3.9 41 127-167 233-277 (299)
207 PF01083 Cutinase: Cutinase; 94.3 0.17 3.7E-06 34.9 5.7 36 31-67 64-100 (179)
208 PF08237 PE-PPE: PE-PPE domain 94.2 0.28 6.1E-06 35.2 6.7 60 9-68 2-68 (225)
209 PLN02847 triacylglycerol lipas 94.0 0.094 2E-06 42.6 4.4 19 49-67 251-270 (633)
210 PF11144 DUF2920: Protein of u 94.0 0.89 1.9E-05 35.4 9.4 22 49-75 184-206 (403)
211 KOG3967 Uncharacterized conser 93.8 0.52 1.1E-05 33.6 7.2 74 4-83 139-222 (297)
212 COG0627 Predicted esterase [Ge 93.6 0.31 6.7E-06 36.8 6.3 33 50-87 153-189 (316)
213 PLN02213 sinapoylglucose-malat 92.9 0.48 1E-05 35.8 6.6 58 10-67 2-70 (319)
214 PLN02633 palmitoyl protein thi 92.8 0.29 6.4E-06 36.7 5.1 37 31-67 75-113 (314)
215 KOG4540 Putative lipase essent 92.8 0.29 6.2E-06 36.4 4.8 31 48-83 275-307 (425)
216 COG5153 CVT17 Putative lipase 92.8 0.29 6.2E-06 36.4 4.8 31 48-83 275-307 (425)
217 PF05277 DUF726: Protein of un 92.7 0.37 8.1E-06 36.8 5.6 37 49-85 220-260 (345)
218 KOG1202 Animal-type fatty acid 92.2 2.3 4.9E-05 38.1 10.0 66 17-82 2148-2216(2376)
219 PF00450 Peptidase_S10: Serine 92.0 0.55 1.2E-05 36.5 6.0 78 10-87 86-183 (415)
220 PF02089 Palm_thioest: Palmito 91.8 0.52 1.1E-05 34.9 5.3 37 31-67 61-99 (279)
221 PLN02606 palmitoyl-protein thi 91.7 0.35 7.6E-06 36.2 4.4 37 31-67 76-114 (306)
222 PF00135 COesterase: Carboxyle 89.2 1.2 2.6E-05 35.8 5.8 79 3-83 150-243 (535)
223 KOG2541 Palmitoyl protein thio 88.6 1.4 3.1E-05 32.4 5.2 37 31-67 73-111 (296)
224 PF00450 Peptidase_S10: Serine 88.2 0.75 1.6E-05 35.7 3.9 44 125-168 329-400 (415)
225 PF10605 3HBOH: 3HB-oligomer h 87.6 0.55 1.2E-05 38.4 2.8 41 126-166 555-605 (690)
226 PF09994 DUF2235: Uncharacteri 86.6 2.1 4.6E-05 31.7 5.3 29 39-67 82-111 (277)
227 PTZ00472 serine carboxypeptida 86.3 1 2.2E-05 36.0 3.7 18 125-142 363-380 (462)
228 COG2272 PnbA Carboxylesterase 85.7 4.8 0.0001 32.3 7.0 64 4-67 119-199 (491)
229 PLN03016 sinapoylglucose-malat 85.6 2.2 4.7E-05 33.9 5.2 58 10-67 116-184 (433)
230 PF06850 PHB_depo_C: PHB de-po 85.4 0.83 1.8E-05 32.0 2.5 42 126-167 134-182 (202)
231 KOG4372 Predicted alpha/beta h 84.7 0.47 1E-05 36.8 1.1 36 31-67 133-169 (405)
232 COG3673 Uncharacterized conser 84.3 3.8 8.3E-05 31.2 5.6 63 5-67 59-141 (423)
233 PLN02209 serine carboxypeptida 83.9 3.3 7.1E-05 32.9 5.5 77 10-86 118-213 (437)
234 KOG1282 Serine carboxypeptidas 83.3 1.9 4.1E-05 34.3 4.0 58 10-67 118-187 (454)
235 PLN02213 sinapoylglucose-malat 80.4 3.2 7E-05 31.4 4.2 41 126-166 233-300 (319)
236 PF07519 Tannase: Tannase and 78.4 2.6 5.7E-05 33.8 3.3 75 6-86 56-151 (474)
237 TIGR03712 acc_sec_asp2 accesso 77.8 3.8 8.2E-05 32.9 3.9 49 34-87 341-392 (511)
238 PLN02209 serine carboxypeptida 77.0 4.7 0.0001 32.1 4.3 41 126-166 351-418 (437)
239 PF00698 Acyl_transf_1: Acyl t 76.8 2.9 6.3E-05 31.5 3.0 28 39-67 75-103 (318)
240 COG2939 Carboxypeptidase C (ca 76.5 5.1 0.00011 32.2 4.3 61 11-71 148-221 (498)
241 PRK10279 hypothetical protein; 75.7 4.3 9.4E-05 30.5 3.7 28 39-67 24-52 (300)
242 cd07225 Pat_PNPLA6_PNPLA7 Pata 75.5 5.1 0.00011 30.2 4.0 28 39-67 34-62 (306)
243 COG4947 Uncharacterized protei 75.4 3.9 8.5E-05 28.3 3.0 43 39-87 92-138 (227)
244 PLN03016 sinapoylglucose-malat 75.2 5.8 0.00013 31.5 4.4 41 126-166 347-414 (433)
245 smart00827 PKS_AT Acyl transfe 74.7 4.1 8.8E-05 30.2 3.3 28 39-67 73-101 (298)
246 COG1752 RssA Predicted esteras 74.5 4.3 9.4E-05 30.5 3.4 29 38-67 29-58 (306)
247 PF09419 PGP_phosphatase: Mito 74.4 18 0.0004 24.7 6.1 53 5-59 36-88 (168)
248 TIGR03131 malonate_mdcH malona 72.3 5.1 0.00011 29.8 3.4 28 39-67 67-95 (295)
249 COG0218 Predicted GTPase [Gene 70.7 6.5 0.00014 27.7 3.3 32 12-44 72-103 (200)
250 cd07198 Patatin Patatin-like p 69.7 9.3 0.0002 25.9 3.9 26 41-67 19-45 (172)
251 cd07227 Pat_Fungal_NTE1 Fungal 69.6 7.6 0.00016 28.8 3.6 28 39-67 29-57 (269)
252 cd07207 Pat_ExoU_VipD_like Exo 69.5 9 0.00019 26.4 3.9 25 42-67 21-46 (194)
253 PF05576 Peptidase_S37: PS-10 68.7 4.7 0.0001 31.8 2.4 71 9-84 88-169 (448)
254 TIGR00128 fabD malonyl CoA-acy 68.6 7.4 0.00016 28.7 3.5 27 40-67 74-102 (290)
255 cd07210 Pat_hypo_W_succinogene 66.8 12 0.00025 26.8 4.1 24 43-67 23-47 (221)
256 cd01714 ETF_beta The electron 61.1 42 0.00092 23.6 6.0 49 11-67 79-132 (202)
257 cd07209 Pat_hypo_Ecoli_Z1214_l 61.0 16 0.00035 25.9 3.9 26 41-67 19-45 (215)
258 KOG1516 Carboxylesterase and r 60.6 25 0.00054 28.6 5.4 37 31-67 173-214 (545)
259 cd07212 Pat_PNPLA9 Patatin-lik 59.6 8.5 0.00018 29.1 2.4 16 52-67 35-51 (312)
260 cd07205 Pat_PNPLA6_PNPLA7_NTE1 59.5 17 0.00037 24.6 3.7 24 43-67 23-47 (175)
261 PF07519 Tannase: Tannase and 59.5 20 0.00044 28.9 4.6 44 122-165 349-406 (474)
262 KOG2385 Uncharacterized conser 59.4 20 0.00043 29.3 4.3 19 49-67 447-466 (633)
263 cd07228 Pat_NTE_like_bacteria 59.3 20 0.00044 24.4 4.1 24 43-67 23-47 (175)
264 PF14253 AbiH: Bacteriophage a 58.8 11 0.00024 27.5 2.9 13 49-61 235-247 (270)
265 PF11713 Peptidase_C80: Peptid 58.7 5.9 0.00013 26.8 1.3 45 17-61 61-116 (157)
266 PRK02399 hypothetical protein; 55.4 89 0.0019 24.8 7.2 67 3-75 24-119 (406)
267 COG1092 Predicted SAM-dependen 55.3 32 0.00069 27.1 4.9 39 9-47 290-328 (393)
268 COG0482 TrmU Predicted tRNA(5- 54.9 31 0.00067 26.7 4.7 52 3-57 21-72 (356)
269 TIGR02816 pfaB_fam PfaB family 53.7 16 0.00036 29.9 3.2 27 40-67 256-284 (538)
270 COG1598 Predicted nuclease of 49.0 44 0.00094 19.3 3.8 33 6-42 12-44 (73)
271 cd07230 Pat_TGL4-5_like Triacy 48.5 27 0.00058 27.7 3.6 25 42-67 95-120 (421)
272 KOG1282 Serine carboxypeptidas 47.8 49 0.0011 26.6 5.0 43 126-168 363-432 (454)
273 cd07224 Pat_like Patatin-like 46.9 37 0.00081 24.4 3.9 18 50-67 30-48 (233)
274 cd07208 Pat_hypo_Ecoli_yjju_li 46.2 33 0.00072 25.1 3.6 24 43-67 21-46 (266)
275 cd07229 Pat_TGL3_like Triacylg 45.9 32 0.00069 27.1 3.6 27 40-67 103-130 (391)
276 PLN03093 Protein SENSITIVITY T 45.4 59 0.0013 24.2 4.7 63 3-66 148-216 (273)
277 KOG1283 Serine carboxypeptidas 43.0 79 0.0017 24.4 5.1 56 11-67 73-141 (414)
278 cd07211 Pat_PNPLA8 Patatin-lik 41.9 20 0.00043 26.9 2.0 16 52-67 44-60 (308)
279 cd07232 Pat_PLPL Patain-like p 41.6 40 0.00087 26.7 3.6 25 42-67 89-114 (407)
280 PF01734 Patatin: Patatin-like 41.5 26 0.00057 23.4 2.4 19 49-67 27-46 (204)
281 cd07204 Pat_PNPLA_like Patatin 41.1 51 0.0011 23.9 3.9 16 52-67 34-50 (243)
282 cd00382 beta_CA Carbonic anhyd 40.5 41 0.00089 21.4 3.0 30 33-63 44-73 (119)
283 PF05576 Peptidase_S37: PS-10 39.6 24 0.00051 28.0 2.0 43 125-167 350-392 (448)
284 COG4553 DepA Poly-beta-hydroxy 39.6 1.7E+02 0.0038 22.4 8.1 42 126-167 339-387 (415)
285 cd07217 Pat17_PNPLA8_PNPLA9_li 38.7 29 0.00062 26.8 2.4 16 52-67 44-60 (344)
286 PF03054 tRNA_Me_trans: tRNA m 38.6 29 0.00063 26.9 2.4 51 3-55 18-69 (356)
287 cd07218 Pat_iPLA2 Calcium-inde 37.5 57 0.0012 23.8 3.7 16 52-67 33-49 (245)
288 cd07231 Pat_SDP1-like Sugar-De 37.4 55 0.0012 25.0 3.6 25 42-67 90-115 (323)
289 PF03283 PAE: Pectinacetyleste 35.5 64 0.0014 25.1 3.9 52 32-84 138-193 (361)
290 TIGR03607 patatin-related prot 35.4 82 0.0018 27.1 4.7 19 49-67 66-85 (739)
291 TIGR00521 coaBC_dfp phosphopan 35.4 1.9E+02 0.0041 22.8 6.4 52 4-56 137-193 (390)
292 COG0331 FabD (acyl-carrier-pro 35.3 43 0.00094 25.4 2.8 19 49-67 85-104 (310)
293 PF09949 DUF2183: Uncharacteri 35.1 1.1E+02 0.0023 19.0 4.1 67 3-75 18-89 (100)
294 cd03379 beta_CA_cladeD Carboni 35.0 60 0.0013 21.4 3.2 30 33-63 41-70 (142)
295 cd07213 Pat17_PNPLA8_PNPLA9_li 34.9 31 0.00068 25.7 2.0 16 52-67 37-53 (288)
296 cd07025 Peptidase_S66 LD-Carbo 34.4 1.3E+02 0.0029 22.3 5.3 40 3-44 21-60 (282)
297 cd07206 Pat_TGL3-4-5_SDP1 Tria 33.7 69 0.0015 24.3 3.6 22 45-67 94-116 (298)
298 KOG4389 Acetylcholinesterase/B 33.6 36 0.00078 27.8 2.2 59 9-67 173-237 (601)
299 PF08197 TT_ORF2a: pORF2a trun 33.6 25 0.00054 18.1 0.9 13 11-23 36-48 (49)
300 cd07221 Pat_PNPLA3 Patatin-lik 33.5 76 0.0016 23.3 3.8 18 50-67 33-51 (252)
301 cd06583 PGRP Peptidoglycan rec 33.0 73 0.0016 19.9 3.3 48 13-60 70-117 (126)
302 cd00883 beta_CA_cladeA Carboni 31.6 62 0.0013 22.4 2.9 32 34-66 67-99 (182)
303 cd07216 Pat17_PNPLA8_PNPLA9_li 31.4 31 0.00067 25.9 1.6 15 52-66 45-60 (309)
304 cd07220 Pat_PNPLA2 Patatin-lik 30.8 90 0.002 22.8 3.8 17 51-67 38-55 (249)
305 PF10081 Abhydrolase_9: Alpha/ 30.8 1E+02 0.0022 23.2 4.0 36 49-84 109-146 (289)
306 cd07222 Pat_PNPLA4 Patatin-lik 30.6 77 0.0017 23.0 3.4 16 52-67 34-50 (246)
307 cd07062 Peptidase_S66_mccF_lik 30.5 1.7E+02 0.0037 22.1 5.3 39 3-43 25-63 (308)
308 COG3887 Predicted signaling pr 30.1 1.1E+02 0.0024 25.6 4.5 37 31-67 319-364 (655)
309 COG4874 Uncharacterized protei 29.8 53 0.0012 24.1 2.4 24 1-24 62-85 (318)
310 PF03681 UPF0150: Uncharacteri 29.1 43 0.00092 17.2 1.4 33 7-43 11-43 (48)
311 cd07199 Pat17_PNPLA8_PNPLA9_li 29.0 39 0.00084 24.6 1.7 16 52-67 37-53 (258)
312 COG0541 Ffh Signal recognition 28.5 3E+02 0.0065 22.3 6.4 56 4-67 177-233 (451)
313 PLN03006 carbonate dehydratase 28.4 1.1E+02 0.0024 23.2 4.0 29 34-63 158-186 (301)
314 PLN02154 carbonic anhydrase 27.7 1.4E+02 0.003 22.5 4.3 32 34-66 152-184 (290)
315 cd07214 Pat17_isozyme_like Pat 27.5 39 0.00085 26.0 1.5 16 52-67 46-62 (349)
316 PF00484 Pro_CA: Carbonic anhy 27.4 1.4E+02 0.0029 19.7 4.0 31 32-63 39-69 (153)
317 cd07215 Pat17_PNPLA8_PNPLA9_li 27.1 40 0.00086 25.7 1.5 16 52-67 43-59 (329)
318 PLN03019 carbonic anhydrase 27.0 1.1E+02 0.0024 23.6 3.7 29 34-63 201-229 (330)
319 COG3675 Predicted lipase [Lipi 27.0 41 0.0009 25.4 1.5 27 37-63 163-189 (332)
320 PF07643 DUF1598: Protein of u 26.6 1E+02 0.0022 18.5 2.8 28 39-67 34-63 (84)
321 KOG4388 Hormone-sensitive lipa 25.5 96 0.0021 26.1 3.3 78 2-82 420-505 (880)
322 PF07521 RMMBL: RNA-metabolisi 25.5 1E+02 0.0023 15.5 3.7 32 10-54 7-38 (43)
323 PF00091 Tubulin: Tubulin/FtsZ 25.4 1E+02 0.0022 21.8 3.3 15 49-63 124-138 (216)
324 cd00884 beta_CA_cladeB Carboni 25.4 87 0.0019 21.9 2.8 32 34-66 73-105 (190)
325 PRK14194 bifunctional 5,10-met 25.3 1.2E+02 0.0026 23.0 3.7 32 36-67 144-181 (301)
326 cd01819 Patatin_and_cPLA2 Pata 25.2 1.3E+02 0.0028 20.0 3.6 17 50-66 29-46 (155)
327 TIGR02883 spore_cwlD N-acetylm 25.1 2.1E+02 0.0045 19.8 4.7 34 13-47 3-44 (189)
328 PF02310 B12-binding: B12 bind 25.0 1.8E+02 0.0038 18.0 5.9 46 2-63 21-66 (121)
329 PF03698 UPF0180: Uncharacteri 24.9 46 0.00099 19.8 1.2 17 2-18 14-30 (80)
330 PTZ00445 p36-lilke protein; Pr 24.6 2.7E+02 0.0059 20.1 5.1 58 2-59 35-102 (219)
331 PLN03014 carbonic anhydrase 24.5 1.3E+02 0.0028 23.3 3.7 29 34-63 206-234 (347)
332 PLN00416 carbonate dehydratase 24.4 96 0.0021 22.9 3.0 32 34-66 126-158 (258)
333 PF12165 DUF3594: Domain of un 23.8 98 0.0021 20.2 2.5 37 31-67 18-56 (137)
334 PF08902 DUF1848: Domain of un 23.5 3.2E+02 0.0069 20.4 5.5 47 4-51 67-114 (266)
335 PF03575 Peptidase_S51: Peptid 23.0 42 0.0009 22.3 0.9 13 51-63 70-82 (154)
336 KOG2805 tRNA (5-methylaminomet 23.0 2.5E+02 0.0053 21.7 4.8 45 3-47 23-68 (377)
337 PF10561 UPF0565: Uncharacteri 22.9 74 0.0016 24.2 2.2 19 49-67 193-212 (303)
338 KOG2486 Predicted GTPase [Gene 22.7 2.3E+02 0.0049 21.6 4.6 42 9-52 182-224 (320)
339 COG0288 CynT Carbonic anhydras 22.4 1.1E+02 0.0023 21.8 2.9 31 32-63 76-106 (207)
340 COG4667 Predicted esterase of 22.3 1.8E+02 0.0038 21.9 3.9 30 37-67 29-59 (292)
341 COG1255 Uncharacterized protei 22.2 49 0.0011 21.3 1.0 17 2-18 29-45 (129)
342 KOG2299 Ribonuclease HI [Repli 22.2 1.2E+02 0.0026 22.5 3.0 32 135-166 143-177 (301)
343 PRK03094 hypothetical protein; 22.2 59 0.0013 19.3 1.2 15 2-16 14-28 (80)
344 cd08769 DAP_dppA_2 Peptidase M 22.1 1.5E+02 0.0033 22.1 3.6 33 124-160 145-177 (270)
345 PRK15219 carbonic anhydrase; P 21.9 1.2E+02 0.0026 22.3 3.0 32 34-66 129-161 (245)
346 KOG0781 Signal recognition par 21.8 2.1E+02 0.0045 23.6 4.5 50 4-61 461-510 (587)
347 PLN02752 [acyl-carrier protein 21.7 60 0.0013 24.8 1.6 16 52-67 127-143 (343)
348 TIGR02813 omega_3_PfaA polyket 21.7 91 0.002 31.1 3.0 27 40-67 666-693 (2582)
349 cd06270 PBP1_GalS_like Ligand 21.5 2.4E+02 0.0053 20.0 4.7 56 4-60 73-128 (268)
350 PF08496 Peptidase_S49_N: Pept 21.5 2.1E+02 0.0046 19.3 4.0 50 9-63 97-146 (155)
351 PF06792 UPF0261: Uncharacteri 21.4 4.3E+02 0.0093 21.1 7.2 67 3-75 22-117 (403)
352 PLN02633 palmitoyl protein thi 21.3 1.5E+02 0.0032 22.7 3.5 30 125-154 24-57 (314)
353 COG1246 ArgA N-acetylglutamate 20.8 1.6E+02 0.0034 20.0 3.2 42 13-63 73-114 (153)
354 PF03490 Varsurf_PPLC: Variant 20.8 1.1E+02 0.0023 16.4 1.9 24 31-55 8-31 (51)
No 1
>PLN02965 Probable pheophorbidase
Probab=99.93 E-value=1.5e-24 Score=157.47 Aligned_cols=162 Identities=14% Similarity=0.058 Sum_probs=111.5
Q ss_pred hhhhhcCcEEEEeCCCCCCCCCCCC--CCChhhHHHHHHHHHHhcCCCCceEEEEEcchHHHH-HHhhccccCCCc---c
Q 044659 3 DFMDELGVYVLTFDRTGYGESDPKP--KRPVKIEAFDIQELANQLNLGHKFDVIGISILTYLF-GLVSNAHHTGIP---A 76 (169)
Q Consensus 3 ~~l~~~g~~v~~~d~~G~G~s~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~ia-~~~~~~~~~~~p---~ 76 (169)
+.|.+.||+|+++|+||||.|+... ..+++++++|+.+++++++..++++++||||||.++ .++. .+| .
T Consensus 24 ~~L~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~a~dl~~~l~~l~~~~~~~lvGhSmGG~ia~~~a~-----~~p~~v~ 98 (255)
T PLN02965 24 TLLDAAGFKSTCVDLTGAGISLTDSNTVSSSDQYNRPLFALLSDLPPDHKVILVGHSIGGGSVTEALC-----KFTDKIS 98 (255)
T ss_pred HHHhhCCceEEEecCCcCCCCCCCccccCCHHHHHHHHHHHHHhcCCCCCEEEEecCcchHHHHHHHH-----hCchhee
Confidence 4466778999999999999997543 345899999999999999762499999999999999 8888 777 6
Q ss_pred eEEEEeecchh-------hhh-------hhc-----cc---chh--HHHHHHH-H-Hhc---------------C--CCC
Q 044659 77 GVALVVLVINY-------CIT-------CRL-----QG---AHE--SLHRDIM-V-HLG---------------T--WEF 113 (169)
Q Consensus 77 ~~~~~~~~~~~-------~~~-------~~~-----~~---~~~--~~~~~~~-~-~~~---------------~--~~~ 113 (169)
+++++++.... .+. ... .. ... ....... . ... . +..
T Consensus 99 ~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (255)
T PLN02965 99 MAIYVAAAMVKPGSIISPRLKNVMEGTEKIWDYTFGEGPDKPPTGIMMKPEFVRHYYYNQSPLEDYTLSSKLLRPAPVRA 178 (255)
T ss_pred EEEEEccccCCCCCCccHHHHhhhhccccceeeeeccCCCCCcchhhcCHHHHHHHHhcCCCHHHHHHHHHhcCCCCCcc
Confidence 67777654110 000 000 00 000 0000000 0 000 0 000
Q ss_pred --CchhhhccCCCCCCceEEEEeCCCCcchH--HHHHHHhCCCcEEEEecCCCceeeecC
Q 044659 114 --DPMEMENQFPNNEESVYLCQGHKDKLVPF--HRYRAKKLPRIRYHEGSAGGHLMIHEK 169 (169)
Q Consensus 114 --~~~~~~~~~~~~~~P~l~~~g~~D~~v~~--~~~~~~~~~~~~~~~~~~~gH~~~~e~ 169 (169)
....+......+++|+++++|++|.++|+ ++.+.+.++++++++++++||++++|+
T Consensus 179 ~~~~~~~~~~~~~i~vP~lvi~g~~D~~~~~~~~~~~~~~~~~a~~~~i~~~GH~~~~e~ 238 (255)
T PLN02965 179 FQDLDKLPPNPEAEKVPRVYIKTAKDNLFDPVRQDVMVENWPPAQTYVLEDSDHSAFFSV 238 (255)
T ss_pred hhhhhhccchhhcCCCCEEEEEcCCCCCCCHHHHHHHHHhCCcceEEEecCCCCchhhcC
Confidence 01111122346899999999999999999 999999999999999999999999885
No 2
>PLN02385 hydrolase; alpha/beta fold family protein
Probab=99.91 E-value=3.7e-23 Score=156.53 Aligned_cols=162 Identities=17% Similarity=0.155 Sum_probs=108.4
Q ss_pred hhhhhcCcEEEEeCCCCCCCCCCCCC--CChhhHHHHHHHHHHhcCC-----CCceEEEEEcchHHHH-HHhhccccCCC
Q 044659 3 DFMDELGVYVLTFDRTGYGESDPKPK--RPVKIEAFDIQELANQLNL-----GHKFDVIGISILTYLF-GLVSNAHHTGI 74 (169)
Q Consensus 3 ~~l~~~g~~v~~~d~~G~G~s~~~~~--~~~~~~~~~~~~~~~~~~~-----~~~~~l~G~S~Gg~ia-~~~~~~~~~~~ 74 (169)
+.|.+.||+|+++|+||||.|+.... .+++++++|+.++++.+.. +.+++|+||||||+++ .++. .+
T Consensus 109 ~~l~~~g~~v~~~D~~G~G~S~~~~~~~~~~~~~~~dv~~~l~~l~~~~~~~~~~~~LvGhSmGG~val~~a~-----~~ 183 (349)
T PLN02385 109 RKIASSGYGVFAMDYPGFGLSEGLHGYIPSFDDLVDDVIEHYSKIKGNPEFRGLPSFLFGQSMGGAVALKVHL-----KQ 183 (349)
T ss_pred HHHHhCCCEEEEecCCCCCCCCCCCCCcCCHHHHHHHHHHHHHHHHhccccCCCCEEEEEeccchHHHHHHHH-----hC
Confidence 34667799999999999999976433 2588899999988877643 1379999999999999 8887 77
Q ss_pred c---ceEEEEeecchh-------hh--------hh-hc------ccc-hhHHHHH----HHHHhcCCCCC----------
Q 044659 75 P---AGVALVVLVINY-------CI--------TC-RL------QGA-HESLHRD----IMVHLGTWEFD---------- 114 (169)
Q Consensus 75 p---~~~~~~~~~~~~-------~~--------~~-~~------~~~-~~~~~~~----~~~~~~~~~~~---------- 114 (169)
| .++++++|.... .. .. .. ... ......+ .........+.
T Consensus 184 p~~v~glVLi~p~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (349)
T PLN02385 184 PNAWDGAILVAPMCKIADDVVPPPLVLQILILLANLLPKAKLVPQKDLAELAFRDLKKRKMAEYNVIAYKDKPRLRTAVE 263 (349)
T ss_pred cchhhheeEecccccccccccCchHHHHHHHHHHHHCCCceecCCCccccccccCHHHHHHhhcCcceeCCCcchHHHHH
Confidence 7 778888775321 00 00 00 000 0000000 00000000000
Q ss_pred ----chhhhccCCCCCCceEEEEeCCCCcchH--HHHHHHhC--CCcEEEEecCCCceeeecC
Q 044659 115 ----PMEMENQFPNNEESVYLCQGHKDKLVPF--HRYRAKKL--PRIRYHEGSAGGHLMIHEK 169 (169)
Q Consensus 115 ----~~~~~~~~~~~~~P~l~~~g~~D~~v~~--~~~~~~~~--~~~~~~~~~~~gH~~~~e~ 169 (169)
...+...+..+++|+|+++|++|.++|+ .+.+.+.. ++.+++++|++||.+++|+
T Consensus 264 ~l~~~~~~~~~l~~i~~P~Lii~G~~D~vv~~~~~~~l~~~~~~~~~~l~~i~~~gH~l~~e~ 326 (349)
T PLN02385 264 LLRTTQEIEMQLEEVSLPLLILHGEADKVTDPSVSKFLYEKASSSDKKLKLYEDAYHSILEGE 326 (349)
T ss_pred HHHHHHHHHHhcccCCCCEEEEEeCCCCccChHHHHHHHHHcCCCCceEEEeCCCeeecccCC
Confidence 0112234567999999999999999998 78888877 4689999999999998763
No 3
>PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A ....
Probab=99.91 E-value=6.7e-24 Score=149.45 Aligned_cols=160 Identities=24% Similarity=0.339 Sum_probs=113.4
Q ss_pred hhhhhcCcEEEEeCCCCCCCCCCCC---CCChhhHHHHHHHHHHhcCCCCceEEEEEcchHHHH-HHhhccccCCCc---
Q 044659 3 DFMDELGVYVLTFDRTGYGESDPKP---KRPVKIEAFDIQELANQLNLGHKFDVIGISILTYLF-GLVSNAHHTGIP--- 75 (169)
Q Consensus 3 ~~l~~~g~~v~~~d~~G~G~s~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~ia-~~~~~~~~~~~p--- 75 (169)
+.| ..||+|+++|+||||.|+... ..+++++++++.+++++++. ++++++|||+||.++ .++. .+|
T Consensus 19 ~~l-~~~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~l~~~l~~~~~-~~~~lvG~S~Gg~~a~~~a~-----~~p~~v 91 (228)
T PF12697_consen 19 EAL-ARGYRVIAFDLPGHGRSDPPPDYSPYSIEDYAEDLAELLDALGI-KKVILVGHSMGGMIALRLAA-----RYPDRV 91 (228)
T ss_dssp HHH-HTTSEEEEEECTTSTTSSSHSSGSGGSHHHHHHHHHHHHHHTTT-SSEEEEEETHHHHHHHHHHH-----HSGGGE
T ss_pred HHH-hCCCEEEEEecCCccccccccccCCcchhhhhhhhhhccccccc-cccccccccccccccccccc-----cccccc
Confidence 445 369999999999999998754 24589999999999999998 799999999999999 8888 777
Q ss_pred ceEEEEeecchhhhh-------hhcccc-------hhHHH-----H--------HHH-----HHhcCCC--CCchhhhcc
Q 044659 76 AGVALVVLVINYCIT-------CRLQGA-------HESLH-----R--------DIM-----VHLGTWE--FDPMEMENQ 121 (169)
Q Consensus 76 ~~~~~~~~~~~~~~~-------~~~~~~-------~~~~~-----~--------~~~-----~~~~~~~--~~~~~~~~~ 121 (169)
.+++++++....... .+.... ...+. . +.. .....+. .....+...
T Consensus 92 ~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (228)
T PF12697_consen 92 KGLVLLSPPPPLPDSPSRSFGPSFIRRLLAWRSRSLRRLASRFFYRWFDGDEPEDLIRSSRRALAEYLRSNLWQADLSEA 171 (228)
T ss_dssp EEEEEESESSSHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccceeecccccccccccccccchhhhhhhhcccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 778888876632100 000000 00000 0 000 0000000 011222233
Q ss_pred CCCCCCceEEEEeCCCCcchH--HHHHHHhCCCcEEEEecCCCceeeecC
Q 044659 122 FPNNEESVYLCQGHKDKLVPF--HRYRAKKLPRIRYHEGSAGGHLMIHEK 169 (169)
Q Consensus 122 ~~~~~~P~l~~~g~~D~~v~~--~~~~~~~~~~~~~~~~~~~gH~~~~e~ 169 (169)
+..+++|+++++|++|.+++. .+.+.+..++++++++|++||++++|+
T Consensus 172 ~~~~~~pvl~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~ 221 (228)
T PF12697_consen 172 LPRIKVPVLVIHGEDDPIVPPESAEELADKLPNAELVVIPGAGHFLFLEQ 221 (228)
T ss_dssp HHGSSSEEEEEEETTSSSSHHHHHHHHHHHSTTEEEEEETTSSSTHHHHS
T ss_pred ccccCCCeEEeecCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCccHHHC
Confidence 556799999999999999998 888999999999999999999998874
No 4
>TIGR03343 biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase. Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself.
Probab=99.91 E-value=5.9e-23 Score=150.72 Aligned_cols=159 Identities=18% Similarity=0.205 Sum_probs=107.5
Q ss_pred hhhcCcEEEEeCCCCCCCCCCCCC--CChhhHHHHHHHHHHhcCCCCceEEEEEcchHHHH-HHhhccccCCCc---ceE
Q 044659 5 MDELGVYVLTFDRTGYGESDPKPK--RPVKIEAFDIQELANQLNLGHKFDVIGISILTYLF-GLVSNAHHTGIP---AGV 78 (169)
Q Consensus 5 l~~~g~~v~~~d~~G~G~s~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~ia-~~~~~~~~~~~p---~~~ 78 (169)
+.+.||+|+++|+||||.|+.... ......++++.++++.++. ++++++||||||.++ .++. .+| .++
T Consensus 56 l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~~-~~~~lvG~S~Gg~ia~~~a~-----~~p~~v~~l 129 (282)
T TIGR03343 56 FVDAGYRVILKDSPGFNKSDAVVMDEQRGLVNARAVKGLMDALDI-EKAHLVGNSMGGATALNFAL-----EYPDRIGKL 129 (282)
T ss_pred HHhCCCEEEEECCCCCCCCCCCcCcccccchhHHHHHHHHHHcCC-CCeeEEEECchHHHHHHHHH-----hChHhhceE
Confidence 445689999999999999976432 1222568899999999998 899999999999999 8888 777 677
Q ss_pred EEEeecch--hh--------h----hhhcccchhHHHH--------------HHH---------------HHhcCC---C
Q 044659 79 ALVVLVIN--YC--------I----TCRLQGAHESLHR--------------DIM---------------VHLGTW---E 112 (169)
Q Consensus 79 ~~~~~~~~--~~--------~----~~~~~~~~~~~~~--------------~~~---------------~~~~~~---~ 112 (169)
+++++... .. . ..........+.. ... .....+ .
T Consensus 130 vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (282)
T TIGR03343 130 ILMGPGGLGPSLFAPMPMEGIKLLFKLYAEPSYETLKQMLNVFLFDQSLITEELLQGRWENIQRQPEHLKNFLISSQKAP 209 (282)
T ss_pred EEECCCCCCccccccCchHHHHHHHHHhcCCCHHHHHHHHhhCccCcccCcHHHHHhHHHHhhcCHHHHHHHHHhccccc
Confidence 77765321 00 0 0000000000000 000 000000 0
Q ss_pred CCchhhhccCCCCCCceEEEEeCCCCcchH--HHHHHHhCCCcEEEEecCCCceeeecC
Q 044659 113 FDPMEMENQFPNNEESVYLCQGHKDKLVPF--HRYRAKKLPRIRYHEGSAGGHLMIHEK 169 (169)
Q Consensus 113 ~~~~~~~~~~~~~~~P~l~~~g~~D~~v~~--~~~~~~~~~~~~~~~~~~~gH~~~~e~ 169 (169)
.........+..+++|+++++|++|.++++ .+.+.+.+|+++++++|++||++++|+
T Consensus 210 ~~~~~~~~~l~~i~~Pvlli~G~~D~~v~~~~~~~~~~~~~~~~~~~i~~agH~~~~e~ 268 (282)
T TIGR03343 210 LSTWDVTARLGEIKAKTLVTWGRDDRFVPLDHGLKLLWNMPDAQLHVFSRCGHWAQWEH 268 (282)
T ss_pred cccchHHHHHhhCCCCEEEEEccCCCcCCchhHHHHHHhCCCCEEEEeCCCCcCCcccC
Confidence 000111223567999999999999999998 888999999999999999999999874
No 5
>PRK00870 haloalkane dehalogenase; Provisional
Probab=99.90 E-value=4.3e-23 Score=153.20 Aligned_cols=161 Identities=13% Similarity=0.114 Sum_probs=110.4
Q ss_pred hhhhhcCcEEEEeCCCCCCCCCCCC---CCChhhHHHHHHHHHHhcCCCCceEEEEEcchHHHH-HHhhccccCCCc---
Q 044659 3 DFMDELGVYVLTFDRTGYGESDPKP---KRPVKIEAFDIQELANQLNLGHKFDVIGISILTYLF-GLVSNAHHTGIP--- 75 (169)
Q Consensus 3 ~~l~~~g~~v~~~d~~G~G~s~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~ia-~~~~~~~~~~~p--- 75 (169)
+.|.+.||+|+++|+||||.|+..+ ..+.+++++++.+++++++. ++++++||||||.++ .++. .+|
T Consensus 67 ~~L~~~gy~vi~~Dl~G~G~S~~~~~~~~~~~~~~a~~l~~~l~~l~~-~~v~lvGhS~Gg~ia~~~a~-----~~p~~v 140 (302)
T PRK00870 67 PILAAAGHRVIAPDLIGFGRSDKPTRREDYTYARHVEWMRSWFEQLDL-TDVTLVCQDWGGLIGLRLAA-----EHPDRF 140 (302)
T ss_pred HHHHhCCCEEEEECCCCCCCCCCCCCcccCCHHHHHHHHHHHHHHcCC-CCEEEEEEChHHHHHHHHHH-----hChhhe
Confidence 3466679999999999999997643 24589999999999999998 799999999999999 8888 777
Q ss_pred ceEEEEeecchhh----------hhhhccc-------------chhHHHHHHHHHh-cC-----C----C-------CCc
Q 044659 76 AGVALVVLVINYC----------ITCRLQG-------------AHESLHRDIMVHL-GT-----W----E-------FDP 115 (169)
Q Consensus 76 ~~~~~~~~~~~~~----------~~~~~~~-------------~~~~~~~~~~~~~-~~-----~----~-------~~~ 115 (169)
.+++++++..+.. |..+... ....+..+....+ .. + . ...
T Consensus 141 ~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (302)
T PRK00870 141 ARLVVANTGLPTGDGPMPDAFWAWRAFSQYSPVLPVGRLVNGGTVRDLSDAVRAAYDAPFPDESYKAGARAFPLLVPTSP 220 (302)
T ss_pred eEEEEeCCCCCCccccchHHHhhhhcccccCchhhHHHHhhccccccCCHHHHHHhhcccCChhhhcchhhhhhcCCCCC
Confidence 7777776532210 1000000 0000000000000 00 0 0 000
Q ss_pred ---h-----hhhccCCCCCCceEEEEeCCCCcchH-HHHHHHhCCCcE---EEEecCCCceeeecC
Q 044659 116 ---M-----EMENQFPNNEESVYLCQGHKDKLVPF-HRYRAKKLPRIR---YHEGSAGGHLMIHEK 169 (169)
Q Consensus 116 ---~-----~~~~~~~~~~~P~l~~~g~~D~~v~~-~~~~~~~~~~~~---~~~~~~~gH~~~~e~ 169 (169)
. .....+..+++|+++++|++|.++|. .+.+.+.+++.+ +.+++++||++++|+
T Consensus 221 ~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~ 286 (302)
T PRK00870 221 DDPAVAANRAAWAVLERWDKPFLTAFSDSDPITGGGDAILQKRIPGAAGQPHPTIKGAGHFLQEDS 286 (302)
T ss_pred CCcchHHHHHHHHhhhcCCCceEEEecCCCCcccCchHHHHhhcccccccceeeecCCCccchhhC
Confidence 0 00122467899999999999999999 878888899876 889999999999874
No 6
>PLN02824 hydrolase, alpha/beta fold family protein
Probab=99.90 E-value=1.2e-22 Score=150.15 Aligned_cols=159 Identities=17% Similarity=0.115 Sum_probs=108.3
Q ss_pred hhhhcCcEEEEeCCCCCCCCCCCC--------CCChhhHHHHHHHHHHhcCCCCceEEEEEcchHHHH-HHhhccccCCC
Q 044659 4 FMDELGVYVLTFDRTGYGESDPKP--------KRPVKIEAFDIQELANQLNLGHKFDVIGISILTYLF-GLVSNAHHTGI 74 (169)
Q Consensus 4 ~l~~~g~~v~~~d~~G~G~s~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~ia-~~~~~~~~~~~ 74 (169)
.|.+. |+|+++|+||||.|+... ..+++++++++.+++++++. ++++|+||||||.++ .++. .+
T Consensus 51 ~L~~~-~~vi~~DlpG~G~S~~~~~~~~~~~~~~~~~~~a~~l~~~l~~l~~-~~~~lvGhS~Gg~va~~~a~-----~~ 123 (294)
T PLN02824 51 VLAKS-HRVYAIDLLGYGYSDKPNPRSAPPNSFYTFETWGEQLNDFCSDVVG-DPAFVICNSVGGVVGLQAAV-----DA 123 (294)
T ss_pred HHHhC-CeEEEEcCCCCCCCCCCccccccccccCCHHHHHHHHHHHHHHhcC-CCeEEEEeCHHHHHHHHHHH-----hC
Confidence 34444 899999999999997542 24689999999999999998 899999999999999 8888 77
Q ss_pred c---ceEEEEeecchhh---------h-------hhhcc-cchhHH----------H--------------HHHHH-Hhc
Q 044659 75 P---AGVALVVLVINYC---------I-------TCRLQ-GAHESL----------H--------------RDIMV-HLG 109 (169)
Q Consensus 75 p---~~~~~~~~~~~~~---------~-------~~~~~-~~~~~~----------~--------------~~~~~-~~~ 109 (169)
| .+++++++..... . ..+.. .....+ . .+... ...
T Consensus 124 p~~v~~lili~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (294)
T PLN02824 124 PELVRGVMLINISLRGLHIKKQPWLGRPFIKAFQNLLRETAVGKAFFKSVATPETVKNILCQCYHDDSAVTDELVEAILR 203 (294)
T ss_pred hhheeEEEEECCCcccccccccchhhhHHHHHHHHHHhchhHHHHHHHhhcCHHHHHHHHHHhccChhhccHHHHHHHHh
Confidence 7 7788877543110 0 00000 000000 0 00000 000
Q ss_pred -CC------------CCCch-hhhccCCCCCCceEEEEeCCCCcchH--HHHHHHhCCCcEEEEecCCCceeeecC
Q 044659 110 -TW------------EFDPM-EMENQFPNNEESVYLCQGHKDKLVPF--HRYRAKKLPRIRYHEGSAGGHLMIHEK 169 (169)
Q Consensus 110 -~~------------~~~~~-~~~~~~~~~~~P~l~~~g~~D~~v~~--~~~~~~~~~~~~~~~~~~~gH~~~~e~ 169 (169)
.. ..... .....+.++++|+++++|++|..+|. .+.+.+..+++++++++++||++++|+
T Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~ 279 (294)
T PLN02824 204 PGLEPGAVDVFLDFISYSGGPLPEELLPAVKCPVLIAWGEKDPWEPVELGRAYANFDAVEDFIVLPGVGHCPQDEA 279 (294)
T ss_pred ccCCchHHHHHHHHhccccccchHHHHhhcCCCeEEEEecCCCCCChHHHHHHHhcCCccceEEeCCCCCChhhhC
Confidence 00 00000 00122556899999999999999999 777888788899999999999999875
No 7
>PLN02298 hydrolase, alpha/beta fold family protein
Probab=99.90 E-value=1.8e-22 Score=151.62 Aligned_cols=161 Identities=15% Similarity=0.151 Sum_probs=106.7
Q ss_pred hhhhhcCcEEEEeCCCCCCCCCCCCC--CChhhHHHHHHHHHHhcCC-----CCceEEEEEcchHHHH-HHhhccccCCC
Q 044659 3 DFMDELGVYVLTFDRTGYGESDPKPK--RPVKIEAFDIQELANQLNL-----GHKFDVIGISILTYLF-GLVSNAHHTGI 74 (169)
Q Consensus 3 ~~l~~~g~~v~~~d~~G~G~s~~~~~--~~~~~~~~~~~~~~~~~~~-----~~~~~l~G~S~Gg~ia-~~~~~~~~~~~ 74 (169)
+.|.+.||+|+++|+||||.|+.... .+.+++++|+.++++.+.. +.+++|+||||||.++ .++. ..
T Consensus 81 ~~L~~~Gy~V~~~D~rGhG~S~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~~~~~i~l~GhSmGG~ia~~~a~-----~~ 155 (330)
T PLN02298 81 IFLAQMGFACFALDLEGHGRSEGLRAYVPNVDLVVEDCLSFFNSVKQREEFQGLPRFLYGESMGGAICLLIHL-----AN 155 (330)
T ss_pred HHHHhCCCEEEEecCCCCCCCCCccccCCCHHHHHHHHHHHHHHHHhcccCCCCCEEEEEecchhHHHHHHHh-----cC
Confidence 34677899999999999999975433 3588889999999987742 1479999999999999 8887 66
Q ss_pred c---ceEEEEeecchhh------h---------hhhccc-----chhHHH-------HHHHHHhcCCCCC--c-------
Q 044659 75 P---AGVALVVLVINYC------I---------TCRLQG-----AHESLH-------RDIMVHLGTWEFD--P------- 115 (169)
Q Consensus 75 p---~~~~~~~~~~~~~------~---------~~~~~~-----~~~~~~-------~~~~~~~~~~~~~--~------- 115 (169)
| .++++++|..... + ..+... ....+. ...........+. +
T Consensus 156 p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (330)
T PLN02298 156 PEGFDGAVLVAPMCKISDKIRPPWPIPQILTFVARFLPTLAIVPTADLLEKSVKVPAKKIIAKRNPMRYNGKPRLGTVVE 235 (330)
T ss_pred cccceeEEEecccccCCcccCCchHHHHHHHHHHHHCCCCccccCCCcccccccCHHHHHHHHhCccccCCCccHHHHHH
Confidence 6 6777777643210 0 000000 000000 0000000000000 0
Q ss_pred -----hhhhccCCCCCCceEEEEeCCCCcchH--HHHHHHhCC--CcEEEEecCCCceeeec
Q 044659 116 -----MEMENQFPNNEESVYLCQGHKDKLVPF--HRYRAKKLP--RIRYHEGSAGGHLMIHE 168 (169)
Q Consensus 116 -----~~~~~~~~~~~~P~l~~~g~~D~~v~~--~~~~~~~~~--~~~~~~~~~~gH~~~~e 168 (169)
..+...+..+++|+|+++|++|.++|+ .+.+++.++ ++++++++++||.++++
T Consensus 236 ~~~~~~~~~~~l~~i~~PvLii~G~~D~ivp~~~~~~l~~~i~~~~~~l~~~~~a~H~~~~e 297 (330)
T PLN02298 236 LLRVTDYLGKKLKDVSIPFIVLHGSADVVTDPDVSRALYEEAKSEDKTIKIYDGMMHSLLFG 297 (330)
T ss_pred HHHHHHHHHHhhhhcCCCEEEEecCCCCCCCHHHHHHHHHHhccCCceEEEcCCcEeeeecC
Confidence 011233567899999999999999999 777777764 78999999999999875
No 8
>PHA02857 monoglyceride lipase; Provisional
Probab=99.89 E-value=1.7e-22 Score=148.04 Aligned_cols=162 Identities=14% Similarity=0.158 Sum_probs=106.1
Q ss_pred hhhhhhcCcEEEEeCCCCCCCCCCCCC--CChhhHHHHHHHHHHhc----CCCCceEEEEEcchHHHH-HHhhccccCCC
Q 044659 2 QDFMDELGVYVLTFDRTGYGESDPKPK--RPVKIEAFDIQELANQL----NLGHKFDVIGISILTYLF-GLVSNAHHTGI 74 (169)
Q Consensus 2 ~~~l~~~g~~v~~~d~~G~G~s~~~~~--~~~~~~~~~~~~~~~~~----~~~~~~~l~G~S~Gg~ia-~~~~~~~~~~~ 74 (169)
.+.|.+.||+|+++|+||||.|+.... .++.++.+|+.+.++.+ .. ++++++||||||.++ .++. ..
T Consensus 45 ~~~l~~~g~~via~D~~G~G~S~~~~~~~~~~~~~~~d~~~~l~~~~~~~~~-~~~~lvG~S~GG~ia~~~a~-----~~ 118 (276)
T PHA02857 45 AENISSLGILVFSHDHIGHGRSNGEKMMIDDFGVYVRDVVQHVVTIKSTYPG-VPVFLLGHSMGATISILAAY-----KN 118 (276)
T ss_pred HHHHHhCCCEEEEccCCCCCCCCCccCCcCCHHHHHHHHHHHHHHHHhhCCC-CCEEEEEcCchHHHHHHHHH-----hC
Confidence 345777899999999999999975432 23666677776666543 23 589999999999999 8887 66
Q ss_pred c---ceEEEEeecchhhh----h----h----h-ccc-----chhHHHH---HH-HHHhcCCC----CCc----------
Q 044659 75 P---AGVALVVLVINYCI----T----C----R-LQG-----AHESLHR---DI-MVHLGTWE----FDP---------- 115 (169)
Q Consensus 75 p---~~~~~~~~~~~~~~----~----~----~-~~~-----~~~~~~~---~~-~~~~~~~~----~~~---------- 115 (169)
| +++++++|...... . . . ... ....+.+ .. ......+. ...
T Consensus 119 p~~i~~lil~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (276)
T PHA02857 119 PNLFTAMILMSPLVNAEAVPRLNLLAAKLMGIFYPNKIVGKLCPESVSRDMDEVYKYQYDPLVNHEKIKAGFASQVLKAT 198 (276)
T ss_pred ccccceEEEeccccccccccHHHHHHHHHHHHhCCCCccCCCCHhhccCCHHHHHHHhcCCCccCCCccHHHHHHHHHHH
Confidence 6 78888887543210 0 0 0 000 0000000 00 00000110 000
Q ss_pred hhhhccCCCCCCceEEEEeCCCCcchH--HHHHHHhC-CCcEEEEecCCCceeeecC
Q 044659 116 MEMENQFPNNEESVYLCQGHKDKLVPF--HRYRAKKL-PRIRYHEGSAGGHLMIHEK 169 (169)
Q Consensus 116 ~~~~~~~~~~~~P~l~~~g~~D~~v~~--~~~~~~~~-~~~~~~~~~~~gH~~~~e~ 169 (169)
..+...+..+++|+++++|++|.++|+ ...+.+.. +++++++++++||+++.|+
T Consensus 199 ~~~~~~l~~i~~Pvliv~G~~D~i~~~~~~~~l~~~~~~~~~~~~~~~~gH~~~~e~ 255 (276)
T PHA02857 199 NKVRKIIPKIKTPILILQGTNNEISDVSGAYYFMQHANCNREIKIYEGAKHHLHKET 255 (276)
T ss_pred HHHHHhcccCCCCEEEEecCCCCcCChHHHHHHHHHccCCceEEEeCCCcccccCCc
Confidence 111234678999999999999999999 77777776 4689999999999999773
No 9
>PRK10673 acyl-CoA esterase; Provisional
Probab=99.89 E-value=5e-22 Score=143.75 Aligned_cols=156 Identities=19% Similarity=0.252 Sum_probs=108.3
Q ss_pred cCcEEEEeCCCCCCCCCCCCCCChhhHHHHHHHHHHhcCCCCceEEEEEcchHHHH-HHhhccccCCCc---ceEEEEee
Q 044659 8 LGVYVLTFDRTGYGESDPKPKRPVKIEAFDIQELANQLNLGHKFDVIGISILTYLF-GLVSNAHHTGIP---AGVALVVL 83 (169)
Q Consensus 8 ~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~ia-~~~~~~~~~~~p---~~~~~~~~ 83 (169)
.+|+|+++|+||||.|......+++++++|+.+++++++. ++++++||||||.++ .++. ..| .++++++.
T Consensus 41 ~~~~vi~~D~~G~G~s~~~~~~~~~~~~~d~~~~l~~l~~-~~~~lvGhS~Gg~va~~~a~-----~~~~~v~~lvli~~ 114 (255)
T PRK10673 41 NDHDIIQVDMRNHGLSPRDPVMNYPAMAQDLLDTLDALQI-EKATFIGHSMGGKAVMALTA-----LAPDRIDKLVAIDI 114 (255)
T ss_pred hCCeEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHcCC-CceEEEEECHHHHHHHHHHH-----hCHhhcceEEEEec
Confidence 4699999999999999876667899999999999999988 789999999999999 8888 776 66666643
Q ss_pred cchhh--------h---hhhcc-cch-----hHHHH------HHHHHh------cCCCCCch-------hh--hccCCCC
Q 044659 84 VINYC--------I---TCRLQ-GAH-----ESLHR------DIMVHL------GTWEFDPM-------EM--ENQFPNN 125 (169)
Q Consensus 84 ~~~~~--------~---~~~~~-~~~-----~~~~~------~~~~~~------~~~~~~~~-------~~--~~~~~~~ 125 (169)
..... + ..... ... ..+.. ...... ..|.+... .+ ....+.+
T Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (255)
T PRK10673 115 APVDYHVRRHDEIFAAINAVSEAGATTRQQAAAIMRQHLNEEGVIQFLLKSFVDGEWRFNVPVLWDQYPHIVGWEKIPAW 194 (255)
T ss_pred CCCCccchhhHHHHHHHHHhhhcccccHHHHHHHHHHhcCCHHHHHHHHhcCCcceeEeeHHHHHHhHHHHhCCcccCCC
Confidence 21110 0 00000 000 00000 000000 01111110 00 1124567
Q ss_pred CCceEEEEeCCCCcchH--HHHHHHhCCCcEEEEecCCCceeeecC
Q 044659 126 EESVYLCQGHKDKLVPF--HRYRAKKLPRIRYHEGSAGGHLMIHEK 169 (169)
Q Consensus 126 ~~P~l~~~g~~D~~v~~--~~~~~~~~~~~~~~~~~~~gH~~~~e~ 169 (169)
++|+++++|++|..++. .+.+.+..++.++++++++||++++|+
T Consensus 195 ~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~ 240 (255)
T PRK10673 195 PHPALFIRGGNSPYVTEAYRDDLLAQFPQARAHVIAGAGHWVHAEK 240 (255)
T ss_pred CCCeEEEECCCCCCCCHHHHHHHHHhCCCcEEEEeCCCCCeeeccC
Confidence 89999999999999988 888999999999999999999998874
No 10
>TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase. This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid.
Probab=99.89 E-value=7.5e-22 Score=144.82 Aligned_cols=154 Identities=17% Similarity=0.225 Sum_probs=106.8
Q ss_pred CcEEEEeCCCCCCCCCCCC-CCChhhHHHHHHHHHHhcCCCCceEEEEEcchHHHH-HHhhccccCCCc---ceEEEEee
Q 044659 9 GVYVLTFDRTGYGESDPKP-KRPVKIEAFDIQELANQLNLGHKFDVIGISILTYLF-GLVSNAHHTGIP---AGVALVVL 83 (169)
Q Consensus 9 g~~v~~~d~~G~G~s~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~ia-~~~~~~~~~~~p---~~~~~~~~ 83 (169)
+|+|+++|+||||.|+... ..+++++++++.+++++++. ++++|+||||||.++ .++. ..| .+++++++
T Consensus 51 ~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~i~~l~~-~~~~LvG~S~GG~va~~~a~-----~~p~~v~~lvl~~~ 124 (276)
T TIGR02240 51 DLEVIAFDVPGVGGSSTPRHPYRFPGLAKLAARMLDYLDY-GQVNAIGVSWGGALAQQFAH-----DYPERCKKLILAAT 124 (276)
T ss_pred CceEEEECCCCCCCCCCCCCcCcHHHHHHHHHHHHHHhCc-CceEEEEECHHHHHHHHHHH-----HCHHHhhheEEecc
Confidence 6999999999999997543 24589999999999999998 799999999999999 8888 777 78888876
Q ss_pred cchhh--------hhhhcc------cch-----hHHH-----H--HHHHHhcCC-------CCCch-------hhhccCC
Q 044659 84 VINYC--------ITCRLQ------GAH-----ESLH-----R--DIMVHLGTW-------EFDPM-------EMENQFP 123 (169)
Q Consensus 84 ~~~~~--------~~~~~~------~~~-----~~~~-----~--~~~~~~~~~-------~~~~~-------~~~~~~~ 123 (169)
..... ...... ... ..+. . +.......+ .+... .....+.
T Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 204 (276)
T TIGR02240 125 AAGAVMVPGKPKVLMMMASPRRYIQPSHGIHIAPDIYGGAFRRDPELAMAHASKVRSGGKLGYYWQLFAGLGWTSIHWLH 204 (276)
T ss_pred CCccccCCCchhHHHHhcCchhhhccccccchhhhhccceeeccchhhhhhhhhcccCCCchHHHHHHHHcCCchhhHhh
Confidence 54211 000000 000 0000 0 000000000 00000 0012256
Q ss_pred CCCCceEEEEeCCCCcchH--HHHHHHhCCCcEEEEecCCCceeeecC
Q 044659 124 NNEESVYLCQGHKDKLVPF--HRYRAKKLPRIRYHEGSAGGHLMIHEK 169 (169)
Q Consensus 124 ~~~~P~l~~~g~~D~~v~~--~~~~~~~~~~~~~~~~~~~gH~~~~e~ 169 (169)
++++|+++++|++|+++|+ .+.+.+.+++++++++++ ||++++|+
T Consensus 205 ~i~~P~lii~G~~D~~v~~~~~~~l~~~~~~~~~~~i~~-gH~~~~e~ 251 (276)
T TIGR02240 205 KIQQPTLVLAGDDDPIIPLINMRLLAWRIPNAELHIIDD-GHLFLITR 251 (276)
T ss_pred cCCCCEEEEEeCCCCcCCHHHHHHHHHhCCCCEEEEEcC-CCchhhcc
Confidence 7999999999999999999 788999999999999986 99998874
No 11
>PRK10349 carboxylesterase BioH; Provisional
Probab=99.88 E-value=1.3e-21 Score=141.93 Aligned_cols=155 Identities=14% Similarity=0.013 Sum_probs=100.8
Q ss_pred hhhhcCcEEEEeCCCCCCCCCCCCCCChhhHHHHHHHHHHhcCCCCceEEEEEcchHHHH-HHhhccccCCCc---ceEE
Q 044659 4 FMDELGVYVLTFDRTGYGESDPKPKRPVKIEAFDIQELANQLNLGHKFDVIGISILTYLF-GLVSNAHHTGIP---AGVA 79 (169)
Q Consensus 4 ~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~ia-~~~~~~~~~~~p---~~~~ 79 (169)
.|.+ .|+|+++|+||||.|+.....+.++.++++. ++.. ++++++||||||.++ .++. ..| .+++
T Consensus 35 ~L~~-~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~l~----~~~~-~~~~lvGhS~Gg~ia~~~a~-----~~p~~v~~li 103 (256)
T PRK10349 35 ELSS-HFTLHLVDLPGFGRSRGFGALSLADMAEAVL----QQAP-DKAIWLGWSLGGLVASQIAL-----THPERVQALV 103 (256)
T ss_pred HHhc-CCEEEEecCCCCCCCCCCCCCCHHHHHHHHH----hcCC-CCeEEEEECHHHHHHHHHHH-----hChHhhheEE
Confidence 3443 5999999999999997654445666665544 3556 789999999999999 8888 777 7777
Q ss_pred EEeecchh----hh--------hhhc---ccchhHHHHHH---------------HHH----hcCCCCCc----------
Q 044659 80 LVVLVINY----CI--------TCRL---QGAHESLHRDI---------------MVH----LGTWEFDP---------- 115 (169)
Q Consensus 80 ~~~~~~~~----~~--------~~~~---~~~~~~~~~~~---------------~~~----~~~~~~~~---------- 115 (169)
++++.... .+ ..+. ........+.. ... ........
T Consensus 104 li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (256)
T PRK10349 104 TVASSPCFSARDEWPGIKPDVLAGFQQQLSDDFQRTVERFLALQTMGTETARQDARALKKTVLALPMPEVDVLNGGLEIL 183 (256)
T ss_pred EecCccceecCCCCCcccHHHHHHHHHHHHhchHHHHHHHHHHHHccCchHHHHHHHHHHHhhccCCCcHHHHHHHHHHH
Confidence 77542110 00 0000 00000000000 000 00000000
Q ss_pred --hhhhccCCCCCCceEEEEeCCCCcchH--HHHHHHhCCCcEEEEecCCCceeeecC
Q 044659 116 --MEMENQFPNNEESVYLCQGHKDKLVPF--HRYRAKKLPRIRYHEGSAGGHLMIHEK 169 (169)
Q Consensus 116 --~~~~~~~~~~~~P~l~~~g~~D~~v~~--~~~~~~~~~~~~~~~~~~~gH~~~~e~ 169 (169)
.++...+.++++|+++++|++|.++|. .+.+.+.+++++++++|++||++++|+
T Consensus 184 ~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~i~~~~~~~i~~~gH~~~~e~ 241 (256)
T PRK10349 184 KTVDLRQPLQNVSMPFLRLYGYLDGLVPRKVVPMLDKLWPHSESYIFAKAAHAPFISH 241 (256)
T ss_pred HhCccHHHHhhcCCCeEEEecCCCccCCHHHHHHHHHhCCCCeEEEeCCCCCCccccC
Confidence 011233567999999999999999988 788889999999999999999999875
No 12
>PRK10749 lysophospholipase L2; Provisional
Probab=99.88 E-value=2e-21 Score=146.07 Aligned_cols=160 Identities=16% Similarity=0.047 Sum_probs=105.7
Q ss_pred hhhhcCcEEEEeCCCCCCCCCCCCC-------CChhhHHHHHHHHHHhc----CCCCceEEEEEcchHHHH-HHhhcccc
Q 044659 4 FMDELGVYVLTFDRTGYGESDPKPK-------RPVKIEAFDIQELANQL----NLGHKFDVIGISILTYLF-GLVSNAHH 71 (169)
Q Consensus 4 ~l~~~g~~v~~~d~~G~G~s~~~~~-------~~~~~~~~~~~~~~~~~----~~~~~~~l~G~S~Gg~ia-~~~~~~~~ 71 (169)
.+.+.||+|+++|+||||.|+.... .+++++++|+.++++++ +. .+++++||||||.++ .++.
T Consensus 76 ~l~~~g~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~-~~~~l~GhSmGG~ia~~~a~---- 150 (330)
T PRK10749 76 DLFHLGYDVLIIDHRGQGRSGRLLDDPHRGHVERFNDYVDDLAAFWQQEIQPGPY-RKRYALAHSMGGAILTLFLQ---- 150 (330)
T ss_pred HHHHCCCeEEEEcCCCCCCCCCCCCCCCcCccccHHHHHHHHHHHHHHHHhcCCC-CCeEEEEEcHHHHHHHHHHH----
Confidence 4667899999999999999975321 25889999999988876 45 689999999999999 8887
Q ss_pred CCCc---ceEEEEeecchhh-------------h-hhhc-------c--c-c------------hhHHHHHHHH-HhcCC
Q 044659 72 TGIP---AGVALVVLVINYC-------------I-TCRL-------Q--G-A------------HESLHRDIMV-HLGTW 111 (169)
Q Consensus 72 ~~~p---~~~~~~~~~~~~~-------------~-~~~~-------~--~-~------------~~~~~~~~~~-~~~~~ 111 (169)
..| .++++++|..... + .... . . . .......... ...+-
T Consensus 151 -~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 229 (330)
T PRK10749 151 -RHPGVFDAIALCAPMFGIVLPLPSWMARRILNWAEGHPRIRDGYAIGTGRWRPLPFAINVLTHSRERYRRNLRFYADDP 229 (330)
T ss_pred -hCCCCcceEEEECchhccCCCCCcHHHHHHHHHHHHhcCCCCcCCCCCCCCCCCCcCCCCCCCCHHHHHHHHHHHHhCC
Confidence 666 7788887753210 0 0000 0 0 0 0000000000 00000
Q ss_pred C-----CCc----h------hhhccCCCCCCceEEEEeCCCCcchH--HHHHHHhC-------CCcEEEEecCCCceeee
Q 044659 112 E-----FDP----M------EMENQFPNNEESVYLCQGHKDKLVPF--HRYRAKKL-------PRIRYHEGSAGGHLMIH 167 (169)
Q Consensus 112 ~-----~~~----~------~~~~~~~~~~~P~l~~~g~~D~~v~~--~~~~~~~~-------~~~~~~~~~~~gH~~~~ 167 (169)
. ... . .+.....++++|+|+++|++|.++++ .+.+++.+ ++++++++|++||.++.
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~Lii~G~~D~vv~~~~~~~~~~~l~~~~~~~~~~~l~~~~gagH~~~~ 309 (330)
T PRK10749 230 ELRVGGPTYHWVRESILAGEQVLAGAGDITTPLLLLQAEEERVVDNRMHDRFCEARTAAGHPCEGGKPLVIKGAYHEILF 309 (330)
T ss_pred CcccCCCcHHHHHHHHHHHHHHHhhccCCCCCEEEEEeCCCeeeCHHHHHHHHHHHhhcCCCCCCceEEEeCCCcchhhh
Confidence 0 000 0 11233567899999999999999999 66676655 45689999999999987
Q ss_pred cC
Q 044659 168 EK 169 (169)
Q Consensus 168 e~ 169 (169)
|+
T Consensus 310 E~ 311 (330)
T PRK10749 310 EK 311 (330)
T ss_pred CC
Confidence 63
No 13
>TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein. Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity.
Probab=99.88 E-value=2.2e-21 Score=141.72 Aligned_cols=157 Identities=22% Similarity=0.242 Sum_probs=107.2
Q ss_pred hhhhcCcEEEEeCCCCCCCCCCCCC--CChhhHHHHHHHHHHhcCCCCceEEEEEcchHHHH-HHhhccccCCCc---ce
Q 044659 4 FMDELGVYVLTFDRTGYGESDPKPK--RPVKIEAFDIQELANQLNLGHKFDVIGISILTYLF-GLVSNAHHTGIP---AG 77 (169)
Q Consensus 4 ~l~~~g~~v~~~d~~G~G~s~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~ia-~~~~~~~~~~~p---~~ 77 (169)
.|.+ +|+|+++|+||||.|+.... .+++++++|+.+++++++. ++++|+||||||.++ .++. ..| .+
T Consensus 50 ~l~~-~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~i~~~~~-~~~~lvG~S~Gg~~a~~~a~-----~~p~~v~~ 122 (278)
T TIGR03056 50 PLAR-SFRVVAPDLPGHGFTRAPFRFRFTLPSMAEDLSALCAAEGL-SPDGVIGHSAGAAIALRLAL-----DGPVTPRM 122 (278)
T ss_pred HHhh-CcEEEeecCCCCCCCCCccccCCCHHHHHHHHHHHHHHcCC-CCceEEEECccHHHHHHHHH-----hCCcccce
Confidence 3444 69999999999999976443 4699999999999999988 799999999999999 8887 666 55
Q ss_pred EEEEeecchhh-----------hhhhc-c-----------cchhHHHHHH-----------HHHh---------------
Q 044659 78 VALVVLVINYC-----------ITCRL-Q-----------GAHESLHRDI-----------MVHL--------------- 108 (169)
Q Consensus 78 ~~~~~~~~~~~-----------~~~~~-~-----------~~~~~~~~~~-----------~~~~--------------- 108 (169)
++++++..... ..... . .....+.... ...+
T Consensus 123 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (278)
T TIGR03056 123 VVGINAALMPFEGMAGTLFPYMARVLACNPFTPPMMSRGAADQQRVERLIRDTGSLLDKAGMTYYGRLIRSPAHVDGALS 202 (278)
T ss_pred EEEEcCcccccccccccccchhhHhhhhcccchHHHHhhcccCcchhHHhhccccccccchhhHHHHhhcCchhhhHHHH
Confidence 66655422100 00000 0 0000000000 0000
Q ss_pred --cCCCCCchhhhccCCCCCCceEEEEeCCCCcchH--HHHHHHhCCCcEEEEecCCCceeeecC
Q 044659 109 --GTWEFDPMEMENQFPNNEESVYLCQGHKDKLVPF--HRYRAKKLPRIRYHEGSAGGHLMIHEK 169 (169)
Q Consensus 109 --~~~~~~~~~~~~~~~~~~~P~l~~~g~~D~~v~~--~~~~~~~~~~~~~~~~~~~gH~~~~e~ 169 (169)
..|. .......++++++|+++++|++|.++|+ .+.+.+..++.+++.+|++||++++|+
T Consensus 203 ~~~~~~--~~~~~~~~~~i~~P~lii~g~~D~~vp~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~ 265 (278)
T TIGR03056 203 MMAQWD--LAPLNRDLPRITIPLHLIAGEEDKAVPPDESKRAATRVPTATLHVVPGGGHLVHEEQ 265 (278)
T ss_pred Hhhccc--ccchhhhcccCCCCEEEEEeCCCcccCHHHHHHHHHhccCCeEEEECCCCCcccccC
Confidence 0010 0111223567899999999999999998 888889999999999999999998874
No 14
>PRK03204 haloalkane dehalogenase; Provisional
Probab=99.88 E-value=1.4e-21 Score=144.22 Aligned_cols=156 Identities=15% Similarity=0.126 Sum_probs=103.2
Q ss_pred cCcEEEEeCCCCCCCCCCCCC--CChhhHHHHHHHHHHhcCCCCceEEEEEcchHHHH-HHhhccccCCCc---ceEEEE
Q 044659 8 LGVYVLTFDRTGYGESDPKPK--RPVKIEAFDIQELANQLNLGHKFDVIGISILTYLF-GLVSNAHHTGIP---AGVALV 81 (169)
Q Consensus 8 ~g~~v~~~d~~G~G~s~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~ia-~~~~~~~~~~~p---~~~~~~ 81 (169)
++|+|+++|+||||.|+.... .+.+++++++.+++++++. ++++++||||||.++ .++. .+| .+++++
T Consensus 59 ~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~lvG~S~Gg~va~~~a~-----~~p~~v~~lvl~ 132 (286)
T PRK03204 59 DRFRCVAPDYLGFGLSERPSGFGYQIDEHARVIGEFVDHLGL-DRYLSMGQDWGGPISMAVAV-----ERADRVRGVVLG 132 (286)
T ss_pred CCcEEEEECCCCCCCCCCCCccccCHHHHHHHHHHHHHHhCC-CCEEEEEECccHHHHHHHHH-----hChhheeEEEEE
Confidence 369999999999999975432 4589999999999999998 799999999999999 8887 777 666666
Q ss_pred eecchh-------hhhhhcc--cchhHHH------HH-------------HHHHhcCCCCC-------------------
Q 044659 82 VLVINY-------CITCRLQ--GAHESLH------RD-------------IMVHLGTWEFD------------------- 114 (169)
Q Consensus 82 ~~~~~~-------~~~~~~~--~~~~~~~------~~-------------~~~~~~~~~~~------------------- 114 (169)
++.... .+..... .....+. .. ...........
T Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 212 (286)
T PRK03204 133 NTWFWPADTLAMKAFSRVMSSPPVQYAILRRNFFVERLIPAGTEHRPSSAVMAHYRAVQPNAAARRGVAEMPKQILAARP 212 (286)
T ss_pred CccccCCCchhHHHHHHHhccccchhhhhhhhHHHHHhccccccCCCCHHHHHHhcCCCCCHHHHHHHHHHHHhcchhhH
Confidence 543211 0000000 0000000 00 00000000000
Q ss_pred -chhhhccCC--CCCCceEEEEeCCCCcchH---HHHHHHhCCCcEEEEecCCCceeeecC
Q 044659 115 -PMEMENQFP--NNEESVYLCQGHKDKLVPF---HRYRAKKLPRIRYHEGSAGGHLMIHEK 169 (169)
Q Consensus 115 -~~~~~~~~~--~~~~P~l~~~g~~D~~v~~---~~~~~~~~~~~~~~~~~~~gH~~~~e~ 169 (169)
...+..... ..++|+++++|++|.++++ .+.+.+.+|+.+++++|++||++++|+
T Consensus 213 ~~~~~~~~~~~~~~~~PtliI~G~~D~~~~~~~~~~~~~~~ip~~~~~~i~~aGH~~~~e~ 273 (286)
T PRK03204 213 LLARLAREVPATLGTKPTLLVWGMKDVAFRPKTILPRLRATFPDHVLVELPNAKHFIQEDA 273 (286)
T ss_pred HHHHhhhhhhhhcCCCCeEEEecCCCcccCcHHHHHHHHHhcCCCeEEEcCCCcccccccC
Confidence 000000011 1289999999999998855 688899999999999999999999874
No 15
>TIGR03611 RutD pyrimidine utilization protein D. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067.
Probab=99.88 E-value=1.9e-21 Score=140.00 Aligned_cols=157 Identities=19% Similarity=0.217 Sum_probs=107.3
Q ss_pred hcCcEEEEeCCCCCCCCCCCC--CCChhhHHHHHHHHHHhcCCCCceEEEEEcchHHHH-HHhhccccCCCc---ceEEE
Q 044659 7 ELGVYVLTFDRTGYGESDPKP--KRPVKIEAFDIQELANQLNLGHKFDVIGISILTYLF-GLVSNAHHTGIP---AGVAL 80 (169)
Q Consensus 7 ~~g~~v~~~d~~G~G~s~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~ia-~~~~~~~~~~~p---~~~~~ 80 (169)
..+|+|+++|+||||.|+... ..+++++++++.+++++++. ++++++||||||.++ .++. ..| .++++
T Consensus 37 ~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~i~~~~~-~~~~l~G~S~Gg~~a~~~a~-----~~~~~v~~~i~ 110 (257)
T TIGR03611 37 TQRFHVVTYDHRGTGRSPGELPPGYSIAHMADDVLQLLDALNI-ERFHFVGHALGGLIGLQLAL-----RYPERLLSLVL 110 (257)
T ss_pred HhccEEEEEcCCCCCCCCCCCcccCCHHHHHHHHHHHHHHhCC-CcEEEEEechhHHHHHHHHH-----HChHHhHHhee
Confidence 347999999999999997543 34599999999999999998 799999999999999 8877 666 66776
Q ss_pred Eeecchhhh------h----hhcccchhH-------------HHHHH--------HHHhcCCCCC-----------chhh
Q 044659 81 VVLVINYCI------T----CRLQGAHES-------------LHRDI--------MVHLGTWEFD-----------PMEM 118 (169)
Q Consensus 81 ~~~~~~~~~------~----~~~~~~~~~-------------~~~~~--------~~~~~~~~~~-----------~~~~ 118 (169)
+++...... . .+....... +.... ......+... ..+.
T Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (257)
T TIGR03611 111 INAWSRPDPHTRRCFDVRIALLQHAGPEAYVHAQALFLYPADWISENAARLAADEAHALAHFPGKANVLRRINALEAFDV 190 (257)
T ss_pred ecCCCCCChhHHHHHHHHHHHHhccCcchhhhhhhhhhccccHhhccchhhhhhhhhcccccCccHHHHHHHHHHHcCCc
Confidence 665332210 0 000000000 00000 0000000000 0011
Q ss_pred hccCCCCCCceEEEEeCCCCcchH--HHHHHHhCCCcEEEEecCCCceeeecC
Q 044659 119 ENQFPNNEESVYLCQGHKDKLVPF--HRYRAKKLPRIRYHEGSAGGHLMIHEK 169 (169)
Q Consensus 119 ~~~~~~~~~P~l~~~g~~D~~v~~--~~~~~~~~~~~~~~~~~~~gH~~~~e~ 169 (169)
...+..+++|+++++|++|.++|+ .+.+.+.+++++++.++++||++++|+
T Consensus 191 ~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~ 243 (257)
T TIGR03611 191 SARLDRIQHPVLLIANRDDMLVPYTQSLRLAAALPNAQLKLLPYGGHASNVTD 243 (257)
T ss_pred HHHhcccCccEEEEecCcCcccCHHHHHHHHHhcCCceEEEECCCCCCccccC
Confidence 223566899999999999999999 788899999999999999999988764
No 16
>PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional
Probab=99.87 E-value=2.3e-21 Score=139.29 Aligned_cols=150 Identities=13% Similarity=0.026 Sum_probs=98.8
Q ss_pred CcEEEEeCCCCCCCCCCCCCCChhhHHHHHHHHHHhcCCCCceEEEEEcchHHHH-HHhhccccCCCc----ceEEEEee
Q 044659 9 GVYVLTFDRTGYGESDPKPKRPVKIEAFDIQELANQLNLGHKFDVIGISILTYLF-GLVSNAHHTGIP----AGVALVVL 83 (169)
Q Consensus 9 g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~ia-~~~~~~~~~~~p----~~~~~~~~ 83 (169)
+|+|+++|+||||.|+.....+++++++++.++++.++. ++++++||||||.++ .++. .+| .+++++++
T Consensus 27 ~~~vi~~D~~G~G~S~~~~~~~~~~~~~~l~~~l~~~~~-~~~~lvG~S~Gg~va~~~a~-----~~~~~~v~~lvl~~~ 100 (242)
T PRK11126 27 DYPRLYIDLPGHGGSAAISVDGFADVSRLLSQTLQSYNI-LPYWLVGYSLGGRIAMYYAC-----QGLAGGLCGLIVEGG 100 (242)
T ss_pred CCCEEEecCCCCCCCCCccccCHHHHHHHHHHHHHHcCC-CCeEEEEECHHHHHHHHHHH-----hCCcccccEEEEeCC
Confidence 699999999999999876555799999999999999988 899999999999999 7777 443 56666654
Q ss_pred cchhh--------------h-hhhcccchhHHHHHH-----------------HHHhc-C-----------CCC-Cchhh
Q 044659 84 VINYC--------------I-TCRLQGAHESLHRDI-----------------MVHLG-T-----------WEF-DPMEM 118 (169)
Q Consensus 84 ~~~~~--------------~-~~~~~~~~~~~~~~~-----------------~~~~~-~-----------~~~-~~~~~ 118 (169)
..... | ..+.......+.... ..... . +.. .....
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (242)
T PRK11126 101 NPGLQNAEERQARWQNDRQWAQRFRQEPLEQVLADWYQQPVFASLNAEQRQQLVAKRSNNNGAAVAAMLEATSLAKQPDL 180 (242)
T ss_pred CCCCCCHHHHHHHHhhhHHHHHHhccCcHHHHHHHHHhcchhhccCccHHHHHHHhcccCCHHHHHHHHHhcCcccCCcH
Confidence 32110 0 000000000000000 00000 0 000 00112
Q ss_pred hccCCCCCCceEEEEeCCCCcchH-HHHHHHhCCCcEEEEecCCCceeeecC
Q 044659 119 ENQFPNNEESVYLCQGHKDKLVPF-HRYRAKKLPRIRYHEGSAGGHLMIHEK 169 (169)
Q Consensus 119 ~~~~~~~~~P~l~~~g~~D~~v~~-~~~~~~~~~~~~~~~~~~~gH~~~~e~ 169 (169)
...+.++++|+++++|++|..+.. .+. .+++++.++++||++++|+
T Consensus 181 ~~~l~~i~~P~lii~G~~D~~~~~~~~~-----~~~~~~~i~~~gH~~~~e~ 227 (242)
T PRK11126 181 RPALQALTFPFYYLCGERDSKFQALAQQ-----LALPLHVIPNAGHNAHREN 227 (242)
T ss_pred HHHhhccCCCeEEEEeCCcchHHHHHHH-----hcCeEEEeCCCCCchhhhC
Confidence 234567899999999999987654 322 2789999999999999874
No 17
>PLN03087 BODYGUARD 1 domain containing hydrolase; Provisional
Probab=99.87 E-value=3.9e-21 Score=149.46 Aligned_cols=155 Identities=15% Similarity=0.165 Sum_probs=104.9
Q ss_pred hcCcEEEEeCCCCCCCCCCCC--CCChhhHHHHHH-HHHHhcCCCCceEEEEEcchHHHH-HHhhccccCCCc---ceEE
Q 044659 7 ELGVYVLTFDRTGYGESDPKP--KRPVKIEAFDIQ-ELANQLNLGHKFDVIGISILTYLF-GLVSNAHHTGIP---AGVA 79 (169)
Q Consensus 7 ~~g~~v~~~d~~G~G~s~~~~--~~~~~~~~~~~~-~~~~~~~~~~~~~l~G~S~Gg~ia-~~~~~~~~~~~p---~~~~ 79 (169)
+.+|+|+++|+||||.|+... ..+++++++++. .++++++. ++++++||||||.++ .++. .+| .+++
T Consensus 230 ~~~yrVia~Dl~G~G~S~~p~~~~ytl~~~a~~l~~~ll~~lg~-~k~~LVGhSmGG~iAl~~A~-----~~Pe~V~~LV 303 (481)
T PLN03087 230 KSTYRLFAVDLLGFGRSPKPADSLYTLREHLEMIERSVLERYKV-KSFHIVAHSLGCILALALAV-----KHPGAVKSLT 303 (481)
T ss_pred hCCCEEEEECCCCCCCCcCCCCCcCCHHHHHHHHHHHHHHHcCC-CCEEEEEECHHHHHHHHHHH-----hChHhccEEE
Confidence 368999999999999997543 245888999994 78999998 799999999999999 8888 778 7778
Q ss_pred EEeecchhh--------h--h-----hh-cc----cchhHHH----H--------------HHHHHhcCCCC--------
Q 044659 80 LVVLVINYC--------I--T-----CR-LQ----GAHESLH----R--------------DIMVHLGTWEF-------- 113 (169)
Q Consensus 80 ~~~~~~~~~--------~--~-----~~-~~----~~~~~~~----~--------------~~~~~~~~~~~-------- 113 (169)
++++..... . . .. .. .....+. + ...........
T Consensus 304 Li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~ 383 (481)
T PLN03087 304 LLAPPYYPVPKGVQATQYVMRKVAPRRVWPPIAFGASVACWYEHISRTICLVICKNHRLWEFLTRLLTRNRMRTFLIEGF 383 (481)
T ss_pred EECCCccccccchhHHHHHHHHhcccccCCccccchhHHHHHHHHHhhhhcccccchHHHHHHHHHhhhhhhhHHHHHHH
Confidence 776532100 0 0 00 00 0000000 0 00000000000
Q ss_pred -----Cch-----------------hhhccCCCCCCceEEEEeCCCCcchH--HHHHHHhCCCcEEEEecCCCceeee
Q 044659 114 -----DPM-----------------EMENQFPNNEESVYLCQGHKDKLVPF--HRYRAKKLPRIRYHEGSAGGHLMIH 167 (169)
Q Consensus 114 -----~~~-----------------~~~~~~~~~~~P~l~~~g~~D~~v~~--~~~~~~~~~~~~~~~~~~~gH~~~~ 167 (169)
... .+..-...+++|+++++|++|.++|+ .+.+.+.+|+++++++|++||+.++
T Consensus 384 ~~~~~~~~~~~l~~~i~~~~~~l~~~l~~l~~~I~vPtLII~Ge~D~ivP~~~~~~la~~iP~a~l~vI~~aGH~~~v 461 (481)
T PLN03087 384 FCHTHNAAWHTLHNIICGSGSKLDGYLDHVRDQLKCDVAIFHGGDDELIPVECSYAVKAKVPRARVKVIDDKDHITIV 461 (481)
T ss_pred HhccchhhHHHHHHHHhchhhhhhhHHHHHHHhCCCCEEEEEECCCCCCCHHHHHHHHHhCCCCEEEEeCCCCCcchh
Confidence 000 00011125899999999999999999 8889999999999999999999885
No 18
>TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase. Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate.
Probab=99.87 E-value=4.4e-21 Score=137.16 Aligned_cols=156 Identities=19% Similarity=0.218 Sum_probs=106.0
Q ss_pred cCcEEEEeCCCCCCCCCCCCC-CChhhHHHHHHHHHHhcCCCCceEEEEEcchHHHH-HHhhccccCCCc---ceEEEEe
Q 044659 8 LGVYVLTFDRTGYGESDPKPK-RPVKIEAFDIQELANQLNLGHKFDVIGISILTYLF-GLVSNAHHTGIP---AGVALVV 82 (169)
Q Consensus 8 ~g~~v~~~d~~G~G~s~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~ia-~~~~~~~~~~~p---~~~~~~~ 82 (169)
.||+|+++|+||||.|+.... .+++++++++.++++.++. ++++++||||||+++ .++. ..| .++++++
T Consensus 38 ~~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~i~~~~~-~~v~liG~S~Gg~~a~~~a~-----~~p~~v~~li~~~ 111 (251)
T TIGR02427 38 PDFRVLRYDKRGHGLSDAPEGPYSIEDLADDVLALLDHLGI-ERAVFCGLSLGGLIAQGLAA-----RRPDRVRALVLSN 111 (251)
T ss_pred cccEEEEecCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCC-CceEEEEeCchHHHHHHHHH-----HCHHHhHHHhhcc
Confidence 589999999999999965433 3689999999999999988 799999999999999 8887 665 5556555
Q ss_pred ecchh----hh-hhh---cccchhHHHH--------------------HHHHHh-c-C---C-----CCCchhhhccCCC
Q 044659 83 LVINY----CI-TCR---LQGAHESLHR--------------------DIMVHL-G-T---W-----EFDPMEMENQFPN 124 (169)
Q Consensus 83 ~~~~~----~~-~~~---~~~~~~~~~~--------------------~~~~~~-~-~---~-----~~~~~~~~~~~~~ 124 (169)
+.... .+ ... .......+.. ...... . . + ......+...+.+
T Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (251)
T TIGR02427 112 TAAKIGTPESWNARIAAVRAEGLAALADAVLERWFTPGFREAHPARLDLYRNMLVRQPPDGYAGCCAAIRDADFRDRLGA 191 (251)
T ss_pred CccccCchhhHHHHHhhhhhccHHHHHHHHHHHHcccccccCChHHHHHHHHHHHhcCHHHHHHHHHHHhcccHHHHhhh
Confidence 43211 00 000 0000000000 000000 0 0 0 0000111233567
Q ss_pred CCCceEEEEeCCCCcchH--HHHHHHhCCCcEEEEecCCCceeeecC
Q 044659 125 NEESVYLCQGHKDKLVPF--HRYRAKKLPRIRYHEGSAGGHLMIHEK 169 (169)
Q Consensus 125 ~~~P~l~~~g~~D~~v~~--~~~~~~~~~~~~~~~~~~~gH~~~~e~ 169 (169)
+++|+++++|++|..+|. .+.+.+..++.+++++|++||++++|+
T Consensus 192 ~~~Pvlii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~ 238 (251)
T TIGR02427 192 IAVPTLCIAGDQDGSTPPELVREIADLVPGARFAEIRGAGHIPCVEQ 238 (251)
T ss_pred cCCCeEEEEeccCCcCChHHHHHHHHhCCCceEEEECCCCCcccccC
Confidence 899999999999999999 788888899999999999999998864
No 19
>PRK03592 haloalkane dehalogenase; Provisional
Probab=99.87 E-value=1.5e-21 Score=144.39 Aligned_cols=160 Identities=14% Similarity=0.148 Sum_probs=106.3
Q ss_pred hhhhhcCcEEEEeCCCCCCCCCCCCC-CChhhHHHHHHHHHHhcCCCCceEEEEEcchHHHH-HHhhccccCCCc---ce
Q 044659 3 DFMDELGVYVLTFDRTGYGESDPKPK-RPVKIEAFDIQELANQLNLGHKFDVIGISILTYLF-GLVSNAHHTGIP---AG 77 (169)
Q Consensus 3 ~~l~~~g~~v~~~d~~G~G~s~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~ia-~~~~~~~~~~~p---~~ 77 (169)
+.|.+. |+|+++|+||||.|+.... .+++++++|+..++++++. ++++++||||||.++ .++. .+| .+
T Consensus 48 ~~L~~~-~~via~D~~G~G~S~~~~~~~~~~~~a~dl~~ll~~l~~-~~~~lvGhS~Gg~ia~~~a~-----~~p~~v~~ 120 (295)
T PRK03592 48 PHLAGL-GRCLAPDLIGMGASDKPDIDYTFADHARYLDAWFDALGL-DDVVLVGHDWGSALGFDWAA-----RHPDRVRG 120 (295)
T ss_pred HHHhhC-CEEEEEcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCC-CCeEEEEECHHHHHHHHHHH-----hChhheeE
Confidence 345555 5999999999999976543 4699999999999999998 899999999999999 8888 788 77
Q ss_pred EEEEeecchh-hh-----------hhhcccc-hh-------HHHH-------------H----HHHHh-c--------CC
Q 044659 78 VALVVLVINY-CI-----------TCRLQGA-HE-------SLHR-------------D----IMVHL-G--------TW 111 (169)
Q Consensus 78 ~~~~~~~~~~-~~-----------~~~~~~~-~~-------~~~~-------------~----~~~~~-~--------~~ 111 (169)
++++++.... .+ ..+.... .. .+.. + +.... . .|
T Consensus 121 lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (295)
T PRK03592 121 IAFMEAIVRPMTWDDFPPAVRELFQALRSPGEGEEMVLEENVFIERVLPGSILRPLSDEEMAVYRRPFPTPESRRPTLSW 200 (295)
T ss_pred EEEECCCCCCcchhhcchhHHHHHHHHhCcccccccccchhhHHhhcccCcccccCCHHHHHHHHhhcCCchhhhhhhhh
Confidence 8887753211 00 0000000 00 0000 0 00000 0 00
Q ss_pred C--C----Cch-------hhhccCCCCCCceEEEEeCCCCcc-hH-H-HHHHHhCCCcEEEEecCCCceeeecC
Q 044659 112 E--F----DPM-------EMENQFPNNEESVYLCQGHKDKLV-PF-H-RYRAKKLPRIRYHEGSAGGHLMIHEK 169 (169)
Q Consensus 112 ~--~----~~~-------~~~~~~~~~~~P~l~~~g~~D~~v-~~-~-~~~~~~~~~~~~~~~~~~gH~~~~e~ 169 (169)
. . ... .....+.++++|+++++|++|..+ +. . +.+.+..++.++++++++||++++|+
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~ 274 (295)
T PRK03592 201 PRELPIDGEPADVVALVEEYAQWLATSDVPKLLINAEPGAILTTGAIRDWCRSWPNQLEITVFGAGLHFAQEDS 274 (295)
T ss_pred hhhcCCCCcchhhHhhhhHhHHHhccCCCCeEEEeccCCcccCcHHHHHHHHHhhhhcceeeccCcchhhhhcC
Confidence 0 0 000 011124568999999999999999 54 4 44455678899999999999999874
No 20
>TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily. This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase
Probab=99.87 E-value=1.4e-20 Score=137.27 Aligned_cols=160 Identities=19% Similarity=0.280 Sum_probs=106.8
Q ss_pred hhhhcCcEEEEeCCCCCCCCCCCCC----CChhhHHHHHHHHHHhcCCCCceEEEEEcchHHHH-HHhhccccCCCc---
Q 044659 4 FMDELGVYVLTFDRTGYGESDPKPK----RPVKIEAFDIQELANQLNLGHKFDVIGISILTYLF-GLVSNAHHTGIP--- 75 (169)
Q Consensus 4 ~l~~~g~~v~~~d~~G~G~s~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~ia-~~~~~~~~~~~p--- 75 (169)
.+.+.||+|+++|+||||.|..... .+++++++++.+++++++. ++++++||||||.++ .++. .+|
T Consensus 48 ~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~liG~S~Gg~ia~~~a~-----~~p~~v 121 (288)
T TIGR01250 48 LLKEEGREVIMYDQLGCGYSDQPDDSDELWTIDYFVDELEEVREKLGL-DKFYLLGHSWGGMLAQEYAL-----KYGQHL 121 (288)
T ss_pred HHHhcCCEEEEEcCCCCCCCCCCCcccccccHHHHHHHHHHHHHHcCC-CcEEEEEeehHHHHHHHHHH-----hCcccc
Confidence 4555689999999999999975421 4589999999999999988 789999999999999 8887 666
Q ss_pred ceEEEEeecchh--hh---hh----hcccch--------------hHHHHHHHHHh-------cCC--------------
Q 044659 76 AGVALVVLVINY--CI---TC----RLQGAH--------------ESLHRDIMVHL-------GTW-------------- 111 (169)
Q Consensus 76 ~~~~~~~~~~~~--~~---~~----~~~~~~--------------~~~~~~~~~~~-------~~~-------------- 111 (169)
.+++++++.... .. .. +..... ..+........ ..+
T Consensus 122 ~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (288)
T TIGR01250 122 KGLIISSMLDSAPEYVKELNRLRKELPPEVRAAIKRCEASGDYDNPEYQEAVEVFYHHLLCRTRKWPEALKHLKSGMNTN 201 (288)
T ss_pred ceeeEecccccchHHHHHHHHHHhhcChhHHHHHHHHHhccCcchHHHHHHHHHHHHHhhcccccchHHHHHHhhccCHH
Confidence 666666543221 00 00 000000 00000000000 000
Q ss_pred ---------CCC------chhhhccCCCCCCceEEEEeCCCCcchH-HHHHHHhCCCcEEEEecCCCceeeecC
Q 044659 112 ---------EFD------PMEMENQFPNNEESVYLCQGHKDKLVPF-HRYRAKKLPRIRYHEGSAGGHLMIHEK 169 (169)
Q Consensus 112 ---------~~~------~~~~~~~~~~~~~P~l~~~g~~D~~v~~-~~~~~~~~~~~~~~~~~~~gH~~~~e~ 169 (169)
.+. ..+....+..+++|+++++|++|.+.+. .+.+.+..++.+++.++++||++++|+
T Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~ 275 (288)
T TIGR01250 202 VYNIMQGPNEFTITGNLKDWDITDKLSEIKVPTLLTVGEFDTMTPEAAREMQELIAGSRLVVFPDGSHMTMIED 275 (288)
T ss_pred HHhcccCCccccccccccccCHHHHhhccCCCEEEEecCCCccCHHHHHHHHHhccCCeEEEeCCCCCCcccCC
Confidence 000 0011123456899999999999997555 888888899999999999999999874
No 21
>PLN02679 hydrolase, alpha/beta fold family protein
Probab=99.87 E-value=5.8e-21 Score=145.08 Aligned_cols=160 Identities=18% Similarity=0.183 Sum_probs=104.4
Q ss_pred hhhhcCcEEEEeCCCCCCCCCCCC--CCChhhHHHHHHHHHHhcCCCCceEEEEEcchHHHH-HHhhccccCCCc---ce
Q 044659 4 FMDELGVYVLTFDRTGYGESDPKP--KRPVKIEAFDIQELANQLNLGHKFDVIGISILTYLF-GLVSNAHHTGIP---AG 77 (169)
Q Consensus 4 ~l~~~g~~v~~~d~~G~G~s~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~ia-~~~~~~~~~~~p---~~ 77 (169)
.|.+ +|+|+++|+||||.|+... ..+++++++++.+++++++. ++++|+||||||.++ .++.. .+| .+
T Consensus 110 ~L~~-~~~via~Dl~G~G~S~~~~~~~~~~~~~a~~l~~~l~~l~~-~~~~lvGhS~Gg~ia~~~a~~----~~P~rV~~ 183 (360)
T PLN02679 110 VLAK-NYTVYAIDLLGFGASDKPPGFSYTMETWAELILDFLEEVVQ-KPTVLIGNSVGSLACVIAASE----STRDLVRG 183 (360)
T ss_pred HHhc-CCEEEEECCCCCCCCCCCCCccccHHHHHHHHHHHHHHhcC-CCeEEEEECHHHHHHHHHHHh----cChhhcCE
Confidence 3444 7999999999999997653 34689999999999999998 799999999999999 66640 345 77
Q ss_pred EEEEeecchh-------hhh-h-----------hc--ccch---------hHHHHHHH-HHhcC-CCC------------
Q 044659 78 VALVVLVINY-------CIT-C-----------RL--QGAH---------ESLHRDIM-VHLGT-WEF------------ 113 (169)
Q Consensus 78 ~~~~~~~~~~-------~~~-~-----------~~--~~~~---------~~~~~~~~-~~~~~-~~~------------ 113 (169)
++++++.... .+. . .. .... ....+... ..... ...
T Consensus 184 LVLi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (360)
T PLN02679 184 LVLLNCAGGMNNKAVVDDWRIKLLLPLLWLIDFLLKQRGIASALFNRVKQRDNLKNILLSVYGNKEAVDDELVEIIRGPA 263 (360)
T ss_pred EEEECCccccccccccchHHHhhhcchHHHHHHHhhchhhHHHHHHHhcCHHHHHHHHHHhccCcccCCHHHHHHHHhhc
Confidence 8877653211 000 0 00 0000 00000000 00000 000
Q ss_pred -C---ch------------hhhccCCCCCCceEEEEeCCCCcchH-H------HHHHHhCCCcEEEEecCCCceeeecC
Q 044659 114 -D---PM------------EMENQFPNNEESVYLCQGHKDKLVPF-H------RYRAKKLPRIRYHEGSAGGHLMIHEK 169 (169)
Q Consensus 114 -~---~~------------~~~~~~~~~~~P~l~~~g~~D~~v~~-~------~~~~~~~~~~~~~~~~~~gH~~~~e~ 169 (169)
. .. .....+..+++|+++++|++|.++|+ . +.+.+.+|+.+++++|++||++++|+
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PtLii~G~~D~~~p~~~~~~~~~~~l~~~ip~~~l~~i~~aGH~~~~E~ 342 (360)
T PLN02679 264 DDEGALDAFVSIVTGPPGPNPIKLIPRISLPILVLWGDQDPFTPLDGPVGKYFSSLPSQLPNVTLYVLEGVGHCPHDDR 342 (360)
T ss_pred cCCChHHHHHHHHhcCCCCCHHHHhhhcCCCEEEEEeCCCCCcCchhhHHHHHHhhhccCCceEEEEcCCCCCCccccC
Confidence 0 00 00112456899999999999999987 2 24566789999999999999999874
No 22
>PRK07581 hypothetical protein; Validated
Probab=99.87 E-value=6.6e-21 Score=143.66 Aligned_cols=160 Identities=13% Similarity=0.122 Sum_probs=102.8
Q ss_pred hhhhcCcEEEEeCCCCCCCCCCCCC----CChh-----hHHHHHHH----HHHhcCCCCc-eEEEEEcchHHHH-HHhhc
Q 044659 4 FMDELGVYVLTFDRTGYGESDPKPK----RPVK-----IEAFDIQE----LANQLNLGHK-FDVIGISILTYLF-GLVSN 68 (169)
Q Consensus 4 ~l~~~g~~v~~~d~~G~G~s~~~~~----~~~~-----~~~~~~~~----~~~~~~~~~~-~~l~G~S~Gg~ia-~~~~~ 68 (169)
.|...+|+|+++|+||||.|+.... .+.+ ..++|+.. +++++++ ++ ++|+||||||+++ .++.
T Consensus 66 ~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~lgi-~~~~~lvG~S~GG~va~~~a~- 143 (339)
T PRK07581 66 ALDPEKYFIIIPNMFGNGLSSSPSNTPAPFNAARFPHVTIYDNVRAQHRLLTEKFGI-ERLALVVGWSMGAQQTYHWAV- 143 (339)
T ss_pred ccCcCceEEEEecCCCCCCCCCCCCCCCCCCCCCCCceeHHHHHHHHHHHHHHHhCC-CceEEEEEeCHHHHHHHHHHH-
Confidence 3445679999999999999975432 2222 24566654 7788999 78 4799999999999 8888
Q ss_pred cccCCCc---ceEEEEeecchh-hh---------hhhc----------------------ccc-----hhHHHH------
Q 044659 69 AHHTGIP---AGVALVVLVINY-CI---------TCRL----------------------QGA-----HESLHR------ 102 (169)
Q Consensus 69 ~~~~~~p---~~~~~~~~~~~~-~~---------~~~~----------------------~~~-----~~~~~~------ 102 (169)
.+| .++++++..... .+ ..+. ... ...+.+
T Consensus 144 ----~~P~~V~~Lvli~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (339)
T PRK07581 144 ----RYPDMVERAAPIAGTAKTTPHNFVFLEGLKAALTADPAFNGGWYAEPPERGLRAHARVYAGWGFSQAFYRQELWRA 219 (339)
T ss_pred ----HCHHHHhhheeeecCCCCCHHHHHHHHHHHHHHHhCCCCCCCCCCCcHHHHHHHHHHHHHHHHhHHHHHHhhhccc
Confidence 888 777777532210 00 0000 000 000000
Q ss_pred -------H----HHH-Hhc--C----------C-C--C--C---chhhhccCCCCCCceEEEEeCCCCcchH--HHHHHH
Q 044659 103 -------D----IMV-HLG--T----------W-E--F--D---PMEMENQFPNNEESVYLCQGHKDKLVPF--HRYRAK 148 (169)
Q Consensus 103 -------~----~~~-~~~--~----------~-~--~--~---~~~~~~~~~~~~~P~l~~~g~~D~~v~~--~~~~~~ 148 (169)
+ ... ... . + . + . ..+....+..+++|+|+++|++|.++|+ .+.+.+
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~~~L~~I~~PtLvI~G~~D~~~p~~~~~~l~~ 299 (339)
T PRK07581 220 MGYASLEDFLVGFWEGNFLPRDPNNLLAMLWTWQRGDISRNPAYGGDLAAALGSITAKTFVMPISTDLYFPPEDCEAEAA 299 (339)
T ss_pred cChhhHHHHHHHHHHHhhcccCcccHHHHHHHhhhcccccCcccCCCHHHHHhcCCCCEEEEEeCCCCCCCHHHHHHHHH
Confidence 0 000 000 0 0 0 0 0 0012233556899999999999999998 888899
Q ss_pred hCCCcEEEEecC-CCceeeecC
Q 044659 149 KLPRIRYHEGSA-GGHLMIHEK 169 (169)
Q Consensus 149 ~~~~~~~~~~~~-~gH~~~~e~ 169 (169)
.+|+++++++++ +||+.++|+
T Consensus 300 ~ip~a~l~~i~~~~GH~~~~~~ 321 (339)
T PRK07581 300 LIPNAELRPIESIWGHLAGFGQ 321 (339)
T ss_pred hCCCCeEEEeCCCCCccccccC
Confidence 999999999998 999998874
No 23
>PLN02211 methyl indole-3-acetate methyltransferase
Probab=99.86 E-value=2.5e-20 Score=136.69 Aligned_cols=159 Identities=13% Similarity=0.089 Sum_probs=106.0
Q ss_pred hhhhhcCcEEEEeCCCCCCCCCCCCC--CChhhHHHHHHHHHHhcCCCCceEEEEEcchHHHH-HHhhccccCCCc---c
Q 044659 3 DFMDELGVYVLTFDRTGYGESDPKPK--RPVKIEAFDIQELANQLNLGHKFDVIGISILTYLF-GLVSNAHHTGIP---A 76 (169)
Q Consensus 3 ~~l~~~g~~v~~~d~~G~G~s~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~ia-~~~~~~~~~~~p---~ 76 (169)
+.|.+.||+|+++|+||||.|...+. .++++.++++.+++++++..++++|+||||||.++ .++. .+| .
T Consensus 39 ~~L~~~g~~vi~~dl~g~G~s~~~~~~~~~~~~~~~~l~~~i~~l~~~~~v~lvGhS~GG~v~~~~a~-----~~p~~v~ 113 (273)
T PLN02211 39 CLMENSGYKVTCIDLKSAGIDQSDADSVTTFDEYNKPLIDFLSSLPENEKVILVGHSAGGLSVTQAIH-----RFPKKIC 113 (273)
T ss_pred HHHHhCCCEEEEecccCCCCCCCCcccCCCHHHHHHHHHHHHHhcCCCCCEEEEEECchHHHHHHHHH-----hChhhee
Confidence 45666799999999999998754432 46899999999999998532799999999999999 8887 777 6
Q ss_pred eEEEEeecchh----h---h-hh------hcc------c-----------chhHHHHHHHHHhcC---------------
Q 044659 77 GVALVVLVINY----C---I-TC------RLQ------G-----------AHESLHRDIMVHLGT--------------- 110 (169)
Q Consensus 77 ~~~~~~~~~~~----~---~-~~------~~~------~-----------~~~~~~~~~~~~~~~--------------- 110 (169)
+++++++.... . + .. ... . ....+.... .+..
T Consensus 114 ~lv~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~ 191 (273)
T PLN02211 114 LAVYVAATMLKLGFQTDEDMKDGVPDLSEFGDVYELGFGLGPDQPPTSAIIKKEFRRKI--LYQMSPQEDSTLAAMLLRP 191 (273)
T ss_pred EEEEeccccCCCCCCHHHHHhccccchhhhccceeeeeccCCCCCCceeeeCHHHHHHH--HhcCCCHHHHHHHHHhcCC
Confidence 77777553321 0 0 00 000 0 000000000 0000
Q ss_pred --CC-CCchhhhccCCCC-CCceEEEEeCCCCcchH--HHHHHHhCCCcEEEEecCCCceeeecC
Q 044659 111 --WE-FDPMEMENQFPNN-EESVYLCQGHKDKLVPF--HRYRAKKLPRIRYHEGSAGGHLMIHEK 169 (169)
Q Consensus 111 --~~-~~~~~~~~~~~~~-~~P~l~~~g~~D~~v~~--~~~~~~~~~~~~~~~~~~~gH~~~~e~ 169 (169)
.. +...........+ ++|+++|.|++|.++|+ ++.+.+.+++.+++.++ +||..++|+
T Consensus 192 ~~~~~~~~~~~~~~~~~~~~vP~l~I~g~~D~~ip~~~~~~m~~~~~~~~~~~l~-~gH~p~ls~ 255 (273)
T PLN02211 192 GPILALRSARFEEETGDIDKVPRVYIKTLHDHVVKPEQQEAMIKRWPPSQVYELE-SDHSPFFST 255 (273)
T ss_pred cCccccccccccccccccCccceEEEEeCCCCCCCHHHHHHHHHhCCccEEEEEC-CCCCccccC
Confidence 00 0000000112234 78999999999999999 89999999999999997 799999874
No 24
>PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A ....
Probab=99.86 E-value=3.7e-21 Score=136.60 Aligned_cols=154 Identities=21% Similarity=0.267 Sum_probs=106.6
Q ss_pred cEEEEeCCCCCCCCCC---C--CCCChhhHHHHHHHHHHhcCCCCceEEEEEcchHHHH-HHhhccccCCCc---ceEEE
Q 044659 10 VYVLTFDRTGYGESDP---K--PKRPVKIEAFDIQELANQLNLGHKFDVIGISILTYLF-GLVSNAHHTGIP---AGVAL 80 (169)
Q Consensus 10 ~~v~~~d~~G~G~s~~---~--~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~ia-~~~~~~~~~~~p---~~~~~ 80 (169)
|+|+++|+||+|.|++ . ...+..+.++++..++++++. ++++++||||||.++ .++. .+| .++++
T Consensus 1 f~vi~~d~rG~g~S~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~vG~S~Gg~~~~~~a~-----~~p~~v~~lvl 74 (230)
T PF00561_consen 1 FDVILFDLRGFGYSSPHWDPDFPDYTTDDLAADLEALREALGI-KKINLVGHSMGGMLALEYAA-----QYPERVKKLVL 74 (230)
T ss_dssp EEEEEEECTTSTTSSSCCGSGSCTHCHHHHHHHHHHHHHHHTT-SSEEEEEETHHHHHHHHHHH-----HSGGGEEEEEE
T ss_pred CEEEEEeCCCCCCCCCCccCCcccccHHHHHHHHHHHHHHhCC-CCeEEEEECCChHHHHHHHH-----HCchhhcCcEE
Confidence 7899999999999985 2 233499999999999999999 789999999999999 8888 888 77777
Q ss_pred Eeec--chh--hh---hh--hc------------cc--------c--hhHHHHH--------HH-HHh----------cC
Q 044659 81 VVLV--INY--CI---TC--RL------------QG--------A--HESLHRD--------IM-VHL----------GT 110 (169)
Q Consensus 81 ~~~~--~~~--~~---~~--~~------------~~--------~--~~~~~~~--------~~-~~~----------~~ 110 (169)
+++. ... .+ .. .. .. . ...+... .. ... ..
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (230)
T PF00561_consen 75 ISPPPDLPDGLWNRIWPRGNLQGQLLDNFFNFLSDPIKPLLGRWPKQFFAYDREFVEDFLKQFQSQQYARFAETDAFDNM 154 (230)
T ss_dssp ESESSHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHTCHHHHHHHH
T ss_pred EeeeccchhhhhHHHHhhhhhhhhHHHhhhccccccchhhhhhhhhheeeccCccccchhhccchhhhhHHHHHHHHhhh
Confidence 7764 110 00 00 00 00 0 0000000 00 000 00
Q ss_pred CC-----CCchhhhccCCCCCCceEEEEeCCCCcchH--HHHHHHhCCCcEEEEecCCCceeeecC
Q 044659 111 WE-----FDPMEMENQFPNNEESVYLCQGHKDKLVPF--HRYRAKKLPRIRYHEGSAGGHLMIHEK 169 (169)
Q Consensus 111 ~~-----~~~~~~~~~~~~~~~P~l~~~g~~D~~v~~--~~~~~~~~~~~~~~~~~~~gH~~~~e~ 169 (169)
+. ...........++++|+++++|++|.++|+ ...+.+..|+.++++++++||+.++++
T Consensus 155 ~~~~~~~~~~~~~~~~l~~i~~p~l~i~~~~D~~~p~~~~~~~~~~~~~~~~~~~~~~GH~~~~~~ 220 (230)
T PF00561_consen 155 FWNALGYFSVWDPSPALSNIKVPTLIIWGEDDPLVPPESSEQLAKLIPNSQLVLIEGSGHFAFLEG 220 (230)
T ss_dssp HHHHHHHHHHHHHHHHHTTTTSEEEEEEETTCSSSHHHHHHHHHHHSTTEEEEEETTCCSTHHHHS
T ss_pred ccccccccccccccccccccCCCeEEEEeCCCCCCCHHHHHHHHHhcCCCEEEECCCCChHHHhcC
Confidence 00 000011223567999999999999999999 777899999999999999999988763
No 25
>TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH. This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria.
Probab=99.85 E-value=2.1e-20 Score=133.32 Aligned_cols=152 Identities=15% Similarity=0.052 Sum_probs=98.5
Q ss_pred cCcEEEEeCCCCCCCCCCCCCCChhhHHHHHHHHHHhcCCCCceEEEEEcchHHHH-HHhhccccCCCc---ceEEEEee
Q 044659 8 LGVYVLTFDRTGYGESDPKPKRPVKIEAFDIQELANQLNLGHKFDVIGISILTYLF-GLVSNAHHTGIP---AGVALVVL 83 (169)
Q Consensus 8 ~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~ia-~~~~~~~~~~~p---~~~~~~~~ 83 (169)
.+|+|+++|+||||.|+.....+++++++++.+. + . ++++++||||||.++ .++. .+| .+++++++
T Consensus 29 ~~~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~~~---~-~-~~~~lvG~S~Gg~~a~~~a~-----~~p~~v~~~il~~~ 98 (245)
T TIGR01738 29 AHFTLHLVDLPGHGRSRGFGPLSLADAAEAIAAQ---A-P-DPAIWLGWSLGGLVALHIAA-----THPDRVRALVTVAS 98 (245)
T ss_pred cCeEEEEecCCcCccCCCCCCcCHHHHHHHHHHh---C-C-CCeEEEEEcHHHHHHHHHHH-----HCHHhhheeeEecC
Confidence 3699999999999998765545566666665543 2 3 689999999999999 8888 777 66666654
Q ss_pred cchhh----hh---------hhcc---cchhHHHHHHHH---------------HhcCC--CCCc--------------h
Q 044659 84 VINYC----IT---------CRLQ---GAHESLHRDIMV---------------HLGTW--EFDP--------------M 116 (169)
Q Consensus 84 ~~~~~----~~---------~~~~---~~~~~~~~~~~~---------------~~~~~--~~~~--------------~ 116 (169)
..... +. .+.. ............ ....+ ...+ .
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (245)
T TIGR01738 99 SPCFSAREDWPEGIKPDVLTGFQQQLSDDYQRTIERFLALQTLGTPTARQDARALKQTLLARPTPNVQVLQAGLEILATV 178 (245)
T ss_pred CcccccCCcccccCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCccchHHHHHHHHhhccCCCCHHHHHHHHHHhhcc
Confidence 32110 00 0000 000000000000 00000 0000 0
Q ss_pred hhhccCCCCCCceEEEEeCCCCcchH--HHHHHHhCCCcEEEEecCCCceeeecC
Q 044659 117 EMENQFPNNEESVYLCQGHKDKLVPF--HRYRAKKLPRIRYHEGSAGGHLMIHEK 169 (169)
Q Consensus 117 ~~~~~~~~~~~P~l~~~g~~D~~v~~--~~~~~~~~~~~~~~~~~~~gH~~~~e~ 169 (169)
+....+.++++|+++++|++|.++|+ .+.+.+.+++++++.+|++||++++|+
T Consensus 179 ~~~~~l~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~ 233 (245)
T TIGR01738 179 DLRQPLQNISVPFLRLYGYLDGLVPAKVVPYLDKLAPHSELYIFAKAAHAPFLSH 233 (245)
T ss_pred cHHHHHhcCCCCEEEEeecCCcccCHHHHHHHHHhCCCCeEEEeCCCCCCccccC
Confidence 11123567999999999999999999 778889999999999999999999874
No 26
>KOG4178 consensus Soluble epoxide hydrolase [Lipid transport and metabolism]
Probab=99.85 E-value=2.1e-20 Score=136.10 Aligned_cols=160 Identities=21% Similarity=0.225 Sum_probs=109.3
Q ss_pred hhhhcCcEEEEeCCCCCCCCCCCCC---CChhhHHHHHHHHHHhcCCCCceEEEEEcchHHHH-HHhhccccCCCc---c
Q 044659 4 FMDELGVYVLTFDRTGYGESDPKPK---RPVKIEAFDIQELANQLNLGHKFDVIGISILTYLF-GLVSNAHHTGIP---A 76 (169)
Q Consensus 4 ~l~~~g~~v~~~d~~G~G~s~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~ia-~~~~~~~~~~~p---~ 76 (169)
.|+..||+|+|+|+||||.|+.++. .++...+.|+..++++++. ++++++||+||+.+| .++. .+| .
T Consensus 66 ~la~~~~rviA~DlrGyG~Sd~P~~~~~Yt~~~l~~di~~lld~Lg~-~k~~lvgHDwGaivaw~la~-----~~Perv~ 139 (322)
T KOG4178|consen 66 GLASRGYRVIAPDLRGYGFSDAPPHISEYTIDELVGDIVALLDHLGL-KKAFLVGHDWGAIVAWRLAL-----FYPERVD 139 (322)
T ss_pred hhhhcceEEEecCCCCCCCCCCCCCcceeeHHHHHHHHHHHHHHhcc-ceeEEEeccchhHHHHHHHH-----hChhhcc
Confidence 4677789999999999999987765 3599999999999999998 899999999999999 7777 777 6
Q ss_pred eEEEEeecch---------hhh-----------------h--------------hhcccch------------hHH--HH
Q 044659 77 GVALVVLVIN---------YCI-----------------T--------------CRLQGAH------------ESL--HR 102 (169)
Q Consensus 77 ~~~~~~~~~~---------~~~-----------------~--------------~~~~~~~------------~~~--~~ 102 (169)
+++.++.... ..+ + .+..+.. +.| ..
T Consensus 140 ~lv~~nv~~~~p~~~~~~~~~~~f~~~~y~~~fQ~~~~~E~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~t~e 219 (322)
T KOG4178|consen 140 GLVTLNVPFPNPKLKPLDSSKAIFGKSYYICLFQEPGKPETELSKDDTEMLVKTFRTRKTPGPLIVPKQPNENPLWLTEE 219 (322)
T ss_pred eEEEecCCCCCcccchhhhhccccCccceeEeccccCcchhhhccchhHHhHHhhhccccCCccccCCCCCCccchhhHH
Confidence 6666643222 000 0 0000000 000 00
Q ss_pred HHHHHhcC---------CCC------CchhhhccCCCCCCceEEEEeCCCCcchH---HHHHHHhCCCc-EEEEecCCCc
Q 044659 103 DIMVHLGT---------WEF------DPMEMENQFPNNEESVYLCQGHKDKLVPF---HRYRAKKLPRI-RYHEGSAGGH 163 (169)
Q Consensus 103 ~~~~~~~~---------~~~------~~~~~~~~~~~~~~P~l~~~g~~D~~v~~---~~~~~~~~~~~-~~~~~~~~gH 163 (169)
+....... ... ..+.+.-...++++|+++++|+.|.+.+. .+.+.+.+++. +.++++++||
T Consensus 220 di~~~~~~f~~~g~~gplNyyrn~~r~w~a~~~~~~~i~iPv~fi~G~~D~v~~~p~~~~~~rk~vp~l~~~vv~~~~gH 299 (322)
T KOG4178|consen 220 DIAFYVSKFQIDGFTGPLNYYRNFRRNWEAAPWALAKITIPVLFIWGDLDPVLPYPIFGELYRKDVPRLTERVVIEGIGH 299 (322)
T ss_pred HHHHHHhccccccccccchhhHHHhhCchhccccccccccceEEEEecCcccccchhHHHHHHHhhccccceEEecCCcc
Confidence 11100000 000 00011112456999999999999999988 77778888876 7889999999
Q ss_pred eeeecC
Q 044659 164 LMIHEK 169 (169)
Q Consensus 164 ~~~~e~ 169 (169)
+++.|+
T Consensus 300 ~vqqe~ 305 (322)
T KOG4178|consen 300 FVQQEK 305 (322)
T ss_pred cccccC
Confidence 999885
No 27
>COG1647 Esterase/lipase [General function prediction only]
Probab=99.85 E-value=9e-21 Score=130.57 Aligned_cols=162 Identities=14% Similarity=0.156 Sum_probs=112.3
Q ss_pred ChhhhhhcCcEEEEeCCCCCCCCCCC-CCCChhhHHHHHHHHHHhcC---CCCceEEEEEcchHHHH-HHhhccccCCCc
Q 044659 1 MQDFMDELGVYVLTFDRTGYGESDPK-PKRPVKIEAFDIQELANQLN---LGHKFDVIGISILTYLF-GLVSNAHHTGIP 75 (169)
Q Consensus 1 ~~~~l~~~g~~v~~~d~~G~G~s~~~-~~~~~~~~~~~~~~~~~~~~---~~~~~~l~G~S~Gg~ia-~~~~~~~~~~~p 75 (169)
|.+.|+++||+|.+|.+||||..... ...+.++|.+++....+++. . +.|.++|.||||.++ .++. .+|
T Consensus 34 Lgr~L~e~GyTv~aP~ypGHG~~~e~fl~t~~~DW~~~v~d~Y~~L~~~gy-~eI~v~GlSmGGv~alkla~-----~~p 107 (243)
T COG1647 34 LGRYLNENGYTVYAPRYPGHGTLPEDFLKTTPRDWWEDVEDGYRDLKEAGY-DEIAVVGLSMGGVFALKLAY-----HYP 107 (243)
T ss_pred HHHHHHHCCceEecCCCCCCCCCHHHHhcCCHHHHHHHHHHHHHHHHHcCC-CeEEEEeecchhHHHHHHHh-----hCC
Confidence 35778999999999999999977543 33458899998888777764 4 789999999999999 8888 777
Q ss_pred -ceEEEEeecch-hhhhhh--------------cccchhHHHHHHHHHhcCCCCC-------chhhhccCCCCCCceEEE
Q 044659 76 -AGVALVVLVIN-YCITCR--------------LQGAHESLHRDIMVHLGTWEFD-------PMEMENQFPNNEESVYLC 132 (169)
Q Consensus 76 -~~~~~~~~~~~-~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~P~l~~ 132 (169)
++++.+|+... ..|..+ .....+...+++......|... ...+...+..+..|++++
T Consensus 108 ~K~iv~m~a~~~~k~~~~iie~~l~y~~~~kk~e~k~~e~~~~e~~~~~~~~~~~~~~~~~~i~~~~~~~~~I~~pt~vv 187 (243)
T COG1647 108 PKKIVPMCAPVNVKSWRIIIEGLLEYFRNAKKYEGKDQEQIDKEMKSYKDTPMTTTAQLKKLIKDARRSLDKIYSPTLVV 187 (243)
T ss_pred ccceeeecCCcccccchhhhHHHHHHHHHhhhccCCCHHHHHHHHHHhhcchHHHHHHHHHHHHHHHhhhhhcccchhhe
Confidence 77777765544 222111 1111222222222222111111 112233455688889999
Q ss_pred EeCCCCcchH--HHHHHHhCC--CcEEEEecCCCceeeec
Q 044659 133 QGHKDKLVPF--HRYRAKKLP--RIRYHEGSAGGHLMIHE 168 (169)
Q Consensus 133 ~g~~D~~v~~--~~~~~~~~~--~~~~~~~~~~gH~~~~e 168 (169)
+|++|.++|. +..+++... ..++.+++++||.+...
T Consensus 188 q~~~D~mv~~~sA~~Iy~~v~s~~KeL~~~e~SgHVIt~D 227 (243)
T COG1647 188 QGRQDEMVPAESANFIYDHVESDDKELKWLEGSGHVITLD 227 (243)
T ss_pred ecccCCCCCHHHHHHHHHhccCCcceeEEEccCCceeecc
Confidence 9999999999 777777775 47899999999998754
No 28
>TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase. This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase.
Probab=99.85 E-value=3.6e-20 Score=132.14 Aligned_cols=159 Identities=19% Similarity=0.153 Sum_probs=104.8
Q ss_pred hhhhcCcEEEEeCCCCCCCCCCCCC---CChhhHHHH-HHHHHHhcCCCCceEEEEEcchHHHH-HHhhccccCCCc---
Q 044659 4 FMDELGVYVLTFDRTGYGESDPKPK---RPVKIEAFD-IQELANQLNLGHKFDVIGISILTYLF-GLVSNAHHTGIP--- 75 (169)
Q Consensus 4 ~l~~~g~~v~~~d~~G~G~s~~~~~---~~~~~~~~~-~~~~~~~~~~~~~~~l~G~S~Gg~ia-~~~~~~~~~~~p--- 75 (169)
.|. .||+|+++|+||||.|+.... .++++.+++ +.++++.++. ++++++||||||.++ .++. ..|
T Consensus 23 ~L~-~~~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~G~S~Gg~ia~~~a~-----~~~~~v 95 (251)
T TIGR03695 23 LLG-PHFRCLAIDLPGHGSSQSPDEIERYDFEEAAQDILATLLDQLGI-EPFFLVGYSMGGRIALYYAL-----QYPERV 95 (251)
T ss_pred Hhc-ccCeEEEEcCCCCCCCCCCCccChhhHHHHHHHHHHHHHHHcCC-CeEEEEEeccHHHHHHHHHH-----hCchhe
Confidence 444 689999999999999975432 348888888 7788888877 799999999999999 8888 667
Q ss_pred ceEEEEeecchhhh---------------hhhcccchhHHHHHHHH-----------------HhcC-CCCCc-------
Q 044659 76 AGVALVVLVINYCI---------------TCRLQGAHESLHRDIMV-----------------HLGT-WEFDP------- 115 (169)
Q Consensus 76 ~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~-----------------~~~~-~~~~~------- 115 (169)
.+++++++...... ..+.......+...... .... .....
T Consensus 96 ~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (251)
T TIGR03695 96 QGLILESGSPGLATEEERAARRQNDEQLAQRFEQEGLEAFLDDWYQQPLFASQKNLPPEQRQALRAKRLANNPEGLAKML 175 (251)
T ss_pred eeeEEecCCCCcCchHhhhhhhhcchhhhhHHHhcCccHHHHHHhcCceeeecccCChHHhHHHHHhcccccchHHHHHH
Confidence 56666654322100 00000000000000000 0000 00000
Q ss_pred --------hhhhccCCCCCCceEEEEeCCCCcchH-HHHHHHhCCCcEEEEecCCCceeeecC
Q 044659 116 --------MEMENQFPNNEESVYLCQGHKDKLVPF-HRYRAKKLPRIRYHEGSAGGHLMIHEK 169 (169)
Q Consensus 116 --------~~~~~~~~~~~~P~l~~~g~~D~~v~~-~~~~~~~~~~~~~~~~~~~gH~~~~e~ 169 (169)
......+..+++|+++++|++|..++. .+.+.+..++.+++++|++||++++|+
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~ 238 (251)
T TIGR03695 176 RATGLGKQPSLWPKLQALTIPVLYLCGEKDEKFVQIAKEMQKLLPNLTLVIIANAGHNIHLEN 238 (251)
T ss_pred HHhhhhcccchHHHhhCCCCceEEEeeCcchHHHHHHHHHHhcCCCCcEEEEcCCCCCcCccC
Confidence 001112456899999999999998877 788888899999999999999999874
No 29
>PRK13604 luxD acyl transferase; Provisional
Probab=99.84 E-value=9.1e-20 Score=133.71 Aligned_cols=158 Identities=11% Similarity=0.084 Sum_probs=102.1
Q ss_pred hhhhhhcCcEEEEeCCCCC-CCCCCCCC-CChhhHHHHHHHHHHh---cCCCCceEEEEEcchHHHH-HHhhccccCCCc
Q 044659 2 QDFMDELGVYVLTFDRTGY-GESDPKPK-RPVKIEAFDIQELANQ---LNLGHKFDVIGISILTYLF-GLVSNAHHTGIP 75 (169)
Q Consensus 2 ~~~l~~~g~~v~~~d~~G~-G~s~~~~~-~~~~~~~~~~~~~~~~---~~~~~~~~l~G~S~Gg~ia-~~~~~~~~~~~p 75 (169)
++.|.++||.|+.||.+|+ |.|++.-. .+......|+..+++. .+. +++.|+||||||.++ .++. ..+
T Consensus 57 A~~La~~G~~vLrfD~rg~~GeS~G~~~~~t~s~g~~Dl~aaid~lk~~~~-~~I~LiG~SmGgava~~~A~-----~~~ 130 (307)
T PRK13604 57 AEYLSSNGFHVIRYDSLHHVGLSSGTIDEFTMSIGKNSLLTVVDWLNTRGI-NNLGLIAASLSARIAYEVIN-----EID 130 (307)
T ss_pred HHHHHHCCCEEEEecCCCCCCCCCCccccCcccccHHHHHHHHHHHHhcCC-CceEEEEECHHHHHHHHHhc-----CCC
Confidence 5678999999999999987 89866432 2233345565444443 344 689999999999999 7776 556
Q ss_pred -ceEEEEeecchhhh--h-hhcc--c--chhHH------------HHHHHH-H-hcCCCCCchhhhccCCCCCCceEEEE
Q 044659 76 -AGVALVVLVINYCI--T-CRLQ--G--AHESL------------HRDIMV-H-LGTWEFDPMEMENQFPNNEESVYLCQ 133 (169)
Q Consensus 76 -~~~~~~~~~~~~~~--~-~~~~--~--~~~~~------------~~~~~~-~-~~~~~~~~~~~~~~~~~~~~P~l~~~ 133 (169)
..++..+|..+... . .... . ....+ .+.... . .-+|. ..........++++|+|++|
T Consensus 131 v~~lI~~sp~~~l~d~l~~~~~~~~~~~p~~~lp~~~d~~g~~l~~~~f~~~~~~~~~~-~~~s~i~~~~~l~~PvLiIH 209 (307)
T PRK13604 131 LSFLITAVGVVNLRDTLERALGYDYLSLPIDELPEDLDFEGHNLGSEVFVTDCFKHGWD-TLDSTINKMKGLDIPFIAFT 209 (307)
T ss_pred CCEEEEcCCcccHHHHHHHhhhcccccCcccccccccccccccccHHHHHHHHHhcCcc-ccccHHHHHhhcCCCEEEEE
Confidence 67888888877531 0 0000 0 00000 000000 0 00111 01111122445779999999
Q ss_pred eCCCCcchH--HHHHHHhCC--CcEEEEecCCCceee
Q 044659 134 GHKDKLVPF--HRYRAKKLP--RIRYHEGSAGGHLMI 166 (169)
Q Consensus 134 g~~D~~v~~--~~~~~~~~~--~~~~~~~~~~gH~~~ 166 (169)
|++|..||+ ++.+++.++ +++++.+||++|.+.
T Consensus 210 G~~D~lVp~~~s~~l~e~~~s~~kkl~~i~Ga~H~l~ 246 (307)
T PRK13604 210 ANNDSWVKQSEVIDLLDSIRSEQCKLYSLIGSSHDLG 246 (307)
T ss_pred cCCCCccCHHHHHHHHHHhccCCcEEEEeCCCccccC
Confidence 999999999 888888775 699999999999864
No 30
>PRK08775 homoserine O-acetyltransferase; Provisional
Probab=99.84 E-value=4.4e-20 Score=139.46 Aligned_cols=155 Identities=17% Similarity=0.100 Sum_probs=104.4
Q ss_pred cCcEEEEeCCCCCCCCCCCCCCChhhHHHHHHHHHHhcCCCCc-eEEEEEcchHHHH-HHhhccccCCCc---ceEEEEe
Q 044659 8 LGVYVLTFDRTGYGESDPKPKRPVKIEAFDIQELANQLNLGHK-FDVIGISILTYLF-GLVSNAHHTGIP---AGVALVV 82 (169)
Q Consensus 8 ~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~G~S~Gg~ia-~~~~~~~~~~~p---~~~~~~~ 82 (169)
.+|+|+++|+||||.|.. ...+.++.++|+.++++++++ ++ ++|+||||||+++ .++. .+| .++++++
T Consensus 98 ~~~~Vi~~Dl~G~g~s~~-~~~~~~~~a~dl~~ll~~l~l-~~~~~lvG~SmGG~vA~~~A~-----~~P~~V~~LvLi~ 170 (343)
T PRK08775 98 ARFRLLAFDFIGADGSLD-VPIDTADQADAIALLLDALGI-ARLHAFVGYSYGALVGLQFAS-----RHPARVRTLVVVS 170 (343)
T ss_pred cccEEEEEeCCCCCCCCC-CCCCHHHHHHHHHHHHHHcCC-CcceEEEEECHHHHHHHHHHH-----HChHhhheEEEEC
Confidence 479999999999998853 334678899999999999998 56 5799999999999 8888 888 7788876
Q ss_pred ecchh-----hhhhh-cc----c-----chh--HHHHH-----------HHHHhcCC-----------------------
Q 044659 83 LVINY-----CITCR-LQ----G-----AHE--SLHRD-----------IMVHLGTW----------------------- 111 (169)
Q Consensus 83 ~~~~~-----~~~~~-~~----~-----~~~--~~~~~-----------~~~~~~~~----------------------- 111 (169)
+.... .+... .. . ... ..... ....+...
T Consensus 171 s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 250 (343)
T PRK08775 171 GAHRAHPYAAAWRALQRRAVALGQLQCAEKHGLALARQLAMLSYRTPEEFEERFDAPPEVINGRVRVAAEDYLDAAGAQY 250 (343)
T ss_pred ccccCCHHHHHHHHHHHHHHHcCCCCCCchhHHHHHHHHHHHHcCCHHHHHHHhCCCccccCCCccchHHHHHHHHHHHH
Confidence 54211 01100 00 0 000 00000 00000000
Q ss_pred --CCCch-------h--h-hccCCCCCCceEEEEeCCCCcchH--HHHHHHhC-CCcEEEEecC-CCceeeecC
Q 044659 112 --EFDPM-------E--M-ENQFPNNEESVYLCQGHKDKLVPF--HRYRAKKL-PRIRYHEGSA-GGHLMIHEK 169 (169)
Q Consensus 112 --~~~~~-------~--~-~~~~~~~~~P~l~~~g~~D~~v~~--~~~~~~~~-~~~~~~~~~~-~gH~~~~e~ 169 (169)
..... . . ...+..+++|+|+++|++|.++|+ .+.+.+.+ ++++++++++ +||++++|+
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~l~~I~~PtLvi~G~~D~~~p~~~~~~~~~~i~p~a~l~~i~~~aGH~~~lE~ 324 (343)
T PRK08775 251 VARTPVNAYLRLSESIDLHRVDPEAIRVPTVVVAVEGDRLVPLADLVELAEGLGPRGSLRVLRSPYGHDAFLKE 324 (343)
T ss_pred HHhcChhHHHHHHHHHhhcCCChhcCCCCeEEEEeCCCEeeCHHHHHHHHHHcCCCCeEEEEeCCccHHHHhcC
Confidence 00000 0 0 112457899999999999999997 77888877 6899999985 999999874
No 31
>PLN02578 hydrolase
Probab=99.83 E-value=1.6e-19 Score=137.00 Aligned_cols=155 Identities=17% Similarity=0.111 Sum_probs=105.4
Q ss_pred cCcEEEEeCCCCCCCCCCCCC-CChhhHHHHHHHHHHhcCCCCceEEEEEcchHHHH-HHhhccccCCCc---ceEEEEe
Q 044659 8 LGVYVLTFDRTGYGESDPKPK-RPVKIEAFDIQELANQLNLGHKFDVIGISILTYLF-GLVSNAHHTGIP---AGVALVV 82 (169)
Q Consensus 8 ~g~~v~~~d~~G~G~s~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~ia-~~~~~~~~~~~p---~~~~~~~ 82 (169)
.+|+|+++|+||||.|+.... .+.+.+++++.++++++.. ++++++||||||.++ .++. .+| .++++++
T Consensus 111 ~~~~v~~~D~~G~G~S~~~~~~~~~~~~a~~l~~~i~~~~~-~~~~lvG~S~Gg~ia~~~A~-----~~p~~v~~lvLv~ 184 (354)
T PLN02578 111 KKYKVYALDLLGFGWSDKALIEYDAMVWRDQVADFVKEVVK-EPAVLVGNSLGGFTALSTAV-----GYPELVAGVALLN 184 (354)
T ss_pred cCCEEEEECCCCCCCCCCcccccCHHHHHHHHHHHHHHhcc-CCeEEEEECHHHHHHHHHHH-----hChHhcceEEEEC
Confidence 369999999999999986543 4688889999999999987 899999999999999 8888 777 6777775
Q ss_pred ecchhhh----------------hh-hccc-----------------chhHHHHHH-HHHhcCC--------------CC
Q 044659 83 LVINYCI----------------TC-RLQG-----------------AHESLHRDI-MVHLGTW--------------EF 113 (169)
Q Consensus 83 ~~~~~~~----------------~~-~~~~-----------------~~~~~~~~~-~~~~~~~--------------~~ 113 (169)
+...... .. +... ......... ...+.+. ..
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (354)
T PLN02578 185 SAGQFGSESREKEEAIVVEETVLTRFVVKPLKEWFQRVVLGFLFWQAKQPSRIESVLKSVYKDKSNVDDYLVESITEPAA 264 (354)
T ss_pred CCccccccccccccccccccchhhHHHhHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHhcCCcccCCHHHHHHHHhccc
Confidence 4321100 00 0000 000000000 0000000 00
Q ss_pred C-------------------chhhhccCCCCCCceEEEEeCCCCcchH--HHHHHHhCCCcEEEEecCCCceeeecC
Q 044659 114 D-------------------PMEMENQFPNNEESVYLCQGHKDKLVPF--HRYRAKKLPRIRYHEGSAGGHLMIHEK 169 (169)
Q Consensus 114 ~-------------------~~~~~~~~~~~~~P~l~~~g~~D~~v~~--~~~~~~~~~~~~~~~~~~~gH~~~~e~ 169 (169)
+ .......+.++++|+++++|++|.+++. .+.+.+.+|+.+++++ ++||++++|+
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLiI~G~~D~~v~~~~~~~l~~~~p~a~l~~i-~~GH~~~~e~ 340 (354)
T PLN02578 265 DPNAGEVYYRLMSRFLFNQSRYTLDSLLSKLSCPLLLLWGDLDPWVGPAKAEKIKAFYPDTTLVNL-QAGHCPHDEV 340 (354)
T ss_pred CCchHHHHHHHHHHHhcCCCCCCHHHHhhcCCCCEEEEEeCCCCCCCHHHHHHHHHhCCCCEEEEe-CCCCCccccC
Confidence 0 0001122466899999999999999988 8889999999999999 5899999874
No 32
>PRK06489 hypothetical protein; Provisional
Probab=99.83 E-value=1.3e-19 Score=137.80 Aligned_cols=154 Identities=15% Similarity=0.099 Sum_probs=101.1
Q ss_pred hcCcEEEEeCCCCCCCCCCCC--------CCChhhHHHHHHHH-HHhcCCCCceE-EEEEcchHHHH-HHhhccccCCCc
Q 044659 7 ELGVYVLTFDRTGYGESDPKP--------KRPVKIEAFDIQEL-ANQLNLGHKFD-VIGISILTYLF-GLVSNAHHTGIP 75 (169)
Q Consensus 7 ~~g~~v~~~d~~G~G~s~~~~--------~~~~~~~~~~~~~~-~~~~~~~~~~~-l~G~S~Gg~ia-~~~~~~~~~~~p 75 (169)
..+|+|+++|+||||.|+... ..++++.++++.++ ++++++ ++++ ++||||||+++ .++. .+|
T Consensus 103 ~~~~~Via~Dl~GhG~S~~p~~~~~~~~~~~~~~~~a~~~~~~l~~~lgi-~~~~~lvG~SmGG~vAl~~A~-----~~P 176 (360)
T PRK06489 103 ASKYFIILPDGIGHGKSSKPSDGLRAAFPRYDYDDMVEAQYRLVTEGLGV-KHLRLILGTSMGGMHAWMWGE-----KYP 176 (360)
T ss_pred ccCCEEEEeCCCCCCCCCCCCcCCCCCCCcccHHHHHHHHHHHHHHhcCC-CceeEEEEECHHHHHHHHHHH-----hCc
Confidence 457999999999999997543 24578888888775 488988 7875 89999999999 8888 888
Q ss_pred ---ceEEEEeecc-hh---h--h-----hhhcc------cc----hhHHHH---------------------------HH
Q 044659 76 ---AGVALVVLVI-NY---C--I-----TCRLQ------GA----HESLHR---------------------------DI 104 (169)
Q Consensus 76 ---~~~~~~~~~~-~~---~--~-----~~~~~------~~----~~~~~~---------------------------~~ 104 (169)
.+++++++.. .. . + ..... .. ...+.. ..
T Consensus 177 ~~V~~LVLi~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (360)
T PRK06489 177 DFMDALMPMASQPTEMSGRNWMWRRMLIESIRNDPAWNNGNYTTQPPSLKRANPMFAIATSGGTLAYQAQAPTRAAADKL 256 (360)
T ss_pred hhhheeeeeccCcccccHHHHHHHHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHHHHHHHhCCHHHHHHhcCChHHHHHH
Confidence 7777765431 10 0 0 00000 00 000000 00
Q ss_pred H-HHhcCC-CCCchh------------hhccCCCCCCceEEEEeCCCCcchH--H--HHHHHhCCCcEEEEecCC----C
Q 044659 105 M-VHLGTW-EFDPME------------MENQFPNNEESVYLCQGHKDKLVPF--H--RYRAKKLPRIRYHEGSAG----G 162 (169)
Q Consensus 105 ~-~~~~~~-~~~~~~------------~~~~~~~~~~P~l~~~g~~D~~v~~--~--~~~~~~~~~~~~~~~~~~----g 162 (169)
. ...... ...... ....+..+++|+|+++|++|.++|+ . +.+.+.+|+.+++++|++ |
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~L~~I~~PvLvI~G~~D~~~p~~~~~~~~la~~ip~a~l~~i~~a~~~~G 336 (360)
T PRK06489 257 VDERLAAPVTADANDFLYQWDSSRDYNPSPDLEKIKAPVLAINSADDERNPPETGVMEAALKRVKHGRLVLIPASPETRG 336 (360)
T ss_pred HHHHHHhhhhcCHHHHHHHHHHhhccChHHHHHhCCCCEEEEecCCCcccChhhHHHHHHHHhCcCCeEEEECCCCCCCC
Confidence 0 000000 000000 1122456899999999999999998 4 789999999999999996 9
Q ss_pred ceee
Q 044659 163 HLMI 166 (169)
Q Consensus 163 H~~~ 166 (169)
|+++
T Consensus 337 H~~~ 340 (360)
T PRK06489 337 HGTT 340 (360)
T ss_pred cccc
Confidence 9986
No 33
>PLN03084 alpha/beta hydrolase fold protein; Provisional
Probab=99.83 E-value=2.6e-19 Score=136.51 Aligned_cols=158 Identities=16% Similarity=0.197 Sum_probs=106.5
Q ss_pred hhhhcCcEEEEeCCCCCCCCCCCCC-----CChhhHHHHHHHHHHhcCCCCceEEEEEcchHHHH-HHhhccccCCCc--
Q 044659 4 FMDELGVYVLTFDRTGYGESDPKPK-----RPVKIEAFDIQELANQLNLGHKFDVIGISILTYLF-GLVSNAHHTGIP-- 75 (169)
Q Consensus 4 ~l~~~g~~v~~~d~~G~G~s~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~ia-~~~~~~~~~~~p-- 75 (169)
.|.+ +|+|+++|+||||.|+.... .+++++++++.+++++++. ++++|+|||+||.++ .++. .+|
T Consensus 149 ~L~~-~~~Via~DlpG~G~S~~p~~~~~~~ys~~~~a~~l~~~i~~l~~-~~~~LvG~s~GG~ia~~~a~-----~~P~~ 221 (383)
T PLN03084 149 VLSK-NYHAIAFDWLGFGFSDKPQPGYGFNYTLDEYVSSLESLIDELKS-DKVSLVVQGYFSPPVVKYAS-----AHPDK 221 (383)
T ss_pred HHhc-CCEEEEECCCCCCCCCCCcccccccCCHHHHHHHHHHHHHHhCC-CCceEEEECHHHHHHHHHHH-----hChHh
Confidence 3443 79999999999999976532 4699999999999999998 799999999999999 8888 777
Q ss_pred -ceEEEEeecchhh-------hhhh---------cccchhH------------HHHHHH-HHhcCC--------------
Q 044659 76 -AGVALVVLVINYC-------ITCR---------LQGAHES------------LHRDIM-VHLGTW-------------- 111 (169)
Q Consensus 76 -~~~~~~~~~~~~~-------~~~~---------~~~~~~~------------~~~~~~-~~~~~~-------------- 111 (169)
.+++++++..... ...+ ....... ...+.. .....+
T Consensus 222 v~~lILi~~~~~~~~~~~p~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~l~~~~ 301 (383)
T PLN03084 222 IKKLILLNPPLTKEHAKLPSTLSEFSNFLLGEIFSQDPLRASDKALTSCGPYAMKEDDAMVYRRPYLTSGSSGFALNAIS 301 (383)
T ss_pred hcEEEEECCCCccccccchHHHHHHHHHHhhhhhhcchHHHHhhhhcccCccCCCHHHHHHHhccccCCcchHHHHHHHH
Confidence 7888887653210 0000 0000000 000000 000000
Q ss_pred ---CCCc----hhhhc--cCCCCCCceEEEEeCCCCcchH--HHHHHHhCCCcEEEEecCCCceeeecC
Q 044659 112 ---EFDP----MEMEN--QFPNNEESVYLCQGHKDKLVPF--HRYRAKKLPRIRYHEGSAGGHLMIHEK 169 (169)
Q Consensus 112 ---~~~~----~~~~~--~~~~~~~P~l~~~g~~D~~v~~--~~~~~~~~~~~~~~~~~~~gH~~~~e~ 169 (169)
.... ..+.. ....+++|+++++|++|.+++. .+.+.+. ++.+++++|++||+++.|+
T Consensus 302 r~~~~~l~~~~~~l~~~l~~~~i~vPvLiI~G~~D~~v~~~~~~~~a~~-~~a~l~vIp~aGH~~~~E~ 369 (383)
T PLN03084 302 RSMKKELKKYIEEMRSILTDKNWKTPITVCWGLRDRWLNYDGVEDFCKS-SQHKLIELPMAGHHVQEDC 369 (383)
T ss_pred HHhhcccchhhHHHHhhhccccCCCCEEEEeeCCCCCcCHHHHHHHHHh-cCCeEEEECCCCCCcchhC
Confidence 0000 00000 0135799999999999999988 6777776 5889999999999999874
No 34
>TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase. This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes.
Probab=99.83 E-value=7.2e-20 Score=138.69 Aligned_cols=74 Identities=18% Similarity=0.287 Sum_probs=60.1
Q ss_pred hhhcCcEEEEeCCCC--CCCCCCC-------------CCCChhhHHHHHHHHHHhcCCCCc-eEEEEEcchHHHH-HHhh
Q 044659 5 MDELGVYVLTFDRTG--YGESDPK-------------PKRPVKIEAFDIQELANQLNLGHK-FDVIGISILTYLF-GLVS 67 (169)
Q Consensus 5 l~~~g~~v~~~d~~G--~G~s~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~-~~l~G~S~Gg~ia-~~~~ 67 (169)
|...+|+|+++|+|| ||.|.+. +..+++++++++.++++++++ ++ ++|+||||||.++ .++.
T Consensus 68 l~~~~~~vi~~D~~G~~~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~l~G~S~Gg~ia~~~a~ 146 (351)
T TIGR01392 68 IDTDRYFVVCSNVLGGCYGSTGPSSINPGGRPYGSDFPLITIRDDVKAQKLLLDHLGI-EQIAAVVGGSMGGMQALEWAI 146 (351)
T ss_pred cCCCceEEEEecCCCCCCCCCCCCCCCCCCCcCCCCCCCCcHHHHHHHHHHHHHHcCC-CCceEEEEECHHHHHHHHHHH
Confidence 345689999999999 5655431 124589999999999999999 78 9999999999999 8888
Q ss_pred ccccCCCc---ceEEEEeec
Q 044659 68 NAHHTGIP---AGVALVVLV 84 (169)
Q Consensus 68 ~~~~~~~p---~~~~~~~~~ 84 (169)
.+| .+++++++.
T Consensus 147 -----~~p~~v~~lvl~~~~ 161 (351)
T TIGR01392 147 -----DYPERVRAIVVLATS 161 (351)
T ss_pred -----HChHhhheEEEEccC
Confidence 778 677777654
No 35
>TIGR01249 pro_imino_pep_1 proline iminopeptidase, Neisseria-type subfamily. This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members.
Probab=99.83 E-value=1.3e-19 Score=134.88 Aligned_cols=158 Identities=20% Similarity=0.258 Sum_probs=104.9
Q ss_pred hhhcCcEEEEeCCCCCCCCCCCCC---CChhhHHHHHHHHHHhcCCCCceEEEEEcchHHHH-HHhhccccCCCc---ce
Q 044659 5 MDELGVYVLTFDRTGYGESDPKPK---RPVKIEAFDIQELANQLNLGHKFDVIGISILTYLF-GLVSNAHHTGIP---AG 77 (169)
Q Consensus 5 l~~~g~~v~~~d~~G~G~s~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~ia-~~~~~~~~~~~p---~~ 77 (169)
+...+|+|+++|+||||.|+.... .+..+.++|+..++++++. ++++++||||||.++ .++. .+| .+
T Consensus 49 ~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~dl~~l~~~l~~-~~~~lvG~S~GG~ia~~~a~-----~~p~~v~~ 122 (306)
T TIGR01249 49 FDPETYRIVLFDQRGCGKSTPHACLEENTTWDLVADIEKLREKLGI-KNWLVFGGSWGSTLALAYAQ-----THPEVVTG 122 (306)
T ss_pred cCccCCEEEEECCCCCCCCCCCCCcccCCHHHHHHHHHHHHHHcCC-CCEEEEEECHHHHHHHHHHH-----HChHhhhh
Confidence 334589999999999999975432 3477899999999999998 799999999999999 8888 777 56
Q ss_pred EEEEeecchh------------------hhhhhccc---ch--hHHHHH---------------HHHHhcCCCC------
Q 044659 78 VALVVLVINY------------------CITCRLQG---AH--ESLHRD---------------IMVHLGTWEF------ 113 (169)
Q Consensus 78 ~~~~~~~~~~------------------~~~~~~~~---~~--~~~~~~---------------~~~~~~~~~~------ 113 (169)
++++++.... .+..+... .. ..+... .......|..
T Consensus 123 lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (306)
T TIGR01249 123 LVLRGIFLLREKEWSWFYEGGASMIYPDAWQRFMDSIPENERNEQLVNAYHDRLQSGDEETKLAAAKAWVDWESTTLLRP 202 (306)
T ss_pred heeeccccCCHHHHHHHHhcchhhhCHHHHHHHhhhCChhhhhccHHHHHHHHccCCCHHHHHHHHHHHHHHhChhhcCC
Confidence 6666543210 00000000 00 000000 0000000100
Q ss_pred ---------Cch------h-----------------hhccCCCC-CCceEEEEeCCCCcchH--HHHHHHhCCCcEEEEe
Q 044659 114 ---------DPM------E-----------------MENQFPNN-EESVYLCQGHKDKLVPF--HRYRAKKLPRIRYHEG 158 (169)
Q Consensus 114 ---------~~~------~-----------------~~~~~~~~-~~P~l~~~g~~D~~v~~--~~~~~~~~~~~~~~~~ 158 (169)
++. . .......+ ++|+++++|++|.++|. .+.+++..++.+++++
T Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~lii~g~~D~~~p~~~~~~~~~~~~~~~~~~~ 282 (306)
T TIGR01249 203 INEIVSTAEDFKFSLAFARLENHYFVNKGFLDVENFILDNISKIRNIPTYIVHGRYDLCCPLQSAWALHKAFPEAELKVT 282 (306)
T ss_pred CCCccccccchHHHHHHHHHHHhHHHHhchhcCchHHHHhhhhccCCCeEEEecCCCCCCCHHHHHHHHHhCCCCEEEEE
Confidence 000 1 01122344 68999999999999999 8999999999999999
Q ss_pred cCCCceeeec
Q 044659 159 SAGGHLMIHE 168 (169)
Q Consensus 159 ~~~gH~~~~e 168 (169)
+++||+.+.+
T Consensus 283 ~~~gH~~~~~ 292 (306)
T TIGR01249 283 NNAGHSAFDP 292 (306)
T ss_pred CCCCCCCCCh
Confidence 9999998643
No 36
>COG2267 PldB Lysophospholipase [Lipid metabolism]
Probab=99.83 E-value=1.4e-19 Score=133.83 Aligned_cols=163 Identities=16% Similarity=0.110 Sum_probs=108.5
Q ss_pred hhhhhhcCcEEEEeCCCCCCCCC-CCCCC--ChhhHHHHHHHHHHhcC---CCCceEEEEEcchHHHH-HHhhccccCCC
Q 044659 2 QDFMDELGVYVLTFDRTGYGESD-PKPKR--PVKIEAFDIQELANQLN---LGHKFDVIGISILTYLF-GLVSNAHHTGI 74 (169)
Q Consensus 2 ~~~l~~~g~~v~~~d~~G~G~s~-~~~~~--~~~~~~~~~~~~~~~~~---~~~~~~l~G~S~Gg~ia-~~~~~~~~~~~ 74 (169)
.+.|.+.||.|+++|+||||.|. ..... +++++.+|+..+++... .+.+++++||||||.|+ .++. ..
T Consensus 54 a~~l~~~G~~V~~~D~RGhG~S~r~~rg~~~~f~~~~~dl~~~~~~~~~~~~~~p~~l~gHSmGg~Ia~~~~~-----~~ 128 (298)
T COG2267 54 ADDLAARGFDVYALDLRGHGRSPRGQRGHVDSFADYVDDLDAFVETIAEPDPGLPVFLLGHSMGGLIALLYLA-----RY 128 (298)
T ss_pred HHHHHhCCCEEEEecCCCCCCCCCCCcCCchhHHHHHHHHHHHHHHHhccCCCCCeEEEEeCcHHHHHHHHHH-----hC
Confidence 45678899999999999999997 33322 38999999999998875 23789999999999999 8888 55
Q ss_pred c---ceEEEEeecchhh---h----------------hh--hcc-----cchhHHHHHHH---HHhcCC--CCC------
Q 044659 75 P---AGVALVVLVINYC---I----------------TC--RLQ-----GAHESLHRDIM---VHLGTW--EFD------ 114 (169)
Q Consensus 75 p---~~~~~~~~~~~~~---~----------------~~--~~~-----~~~~~~~~~~~---~~~~~~--~~~------ 114 (169)
+ .++++.+|+.... . .. +.. .......++.. ....+. .+.
T Consensus 129 ~~~i~~~vLssP~~~l~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~sr~~~~~~~~~~dP~~~~~~~~~~w 208 (298)
T COG2267 129 PPRIDGLVLSSPALGLGGAILRLILARLALKLLGRIRPKLPVDSNLLEGVLTDDLSRDPAEVAAYEADPLIGVGGPVSRW 208 (298)
T ss_pred CccccEEEEECccccCChhHHHHHHHHHhcccccccccccccCcccccCcCcchhhcCHHHHHHHhcCCccccCCccHHH
Confidence 4 8888888876543 1 00 000 00000111110 000000 000
Q ss_pred ----c---h-hhhccCCCCCCceEEEEeCCCCcch-H--HHHHHHhCC--CcEEEEecCCCceeeecC
Q 044659 115 ----P---M-EMENQFPNNEESVYLCQGHKDKLVP-F--HRYRAKKLP--RIRYHEGSAGGHLMIHEK 169 (169)
Q Consensus 115 ----~---~-~~~~~~~~~~~P~l~~~g~~D~~v~-~--~~~~~~~~~--~~~~~~~~~~gH~~~~e~ 169 (169)
. . ........+++|+|+++|++|.+++ . ...+.+... +.+++++||+.|-++.|.
T Consensus 209 ~~~~~~a~~~~~~~~~~~~~~PvLll~g~~D~vv~~~~~~~~~~~~~~~~~~~~~~~~g~~He~~~E~ 276 (298)
T COG2267 209 VDLALLAGRVPALRDAPAIALPVLLLQGGDDRVVDNVEGLARFFERAGSPDKELKVIPGAYHELLNEP 276 (298)
T ss_pred HHHHHHhhcccchhccccccCCEEEEecCCCccccCcHHHHHHHHhcCCCCceEEecCCcchhhhcCc
Confidence 0 0 0011144589999999999999999 5 666655554 578999999999988763
No 37
>KOG4409 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.82 E-value=4.1e-19 Score=130.07 Aligned_cols=71 Identities=23% Similarity=0.171 Sum_probs=61.1
Q ss_pred CcEEEEeCCCCCCCCCCCCCCC-----hhhHHHHHHHHHHhcCCCCceEEEEEcchHHHH-HHhhccccCCCc---ceEE
Q 044659 9 GVYVLTFDRTGYGESDPKPKRP-----VKIEAFDIQELANQLNLGHKFDVIGISILTYLF-GLVSNAHHTGIP---AGVA 79 (169)
Q Consensus 9 g~~v~~~d~~G~G~s~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~ia-~~~~~~~~~~~p---~~~~ 79 (169)
.++|+++|++|+|+|+.++... .....+-++++....++ ++.+|+|||+||+++ .+|. .+| ..++
T Consensus 116 ~~~vyaiDllG~G~SSRP~F~~d~~~~e~~fvesiE~WR~~~~L-~KmilvGHSfGGYLaa~YAl-----KyPerV~kLi 189 (365)
T KOG4409|consen 116 IRNVYAIDLLGFGRSSRPKFSIDPTTAEKEFVESIEQWRKKMGL-EKMILVGHSFGGYLAAKYAL-----KYPERVEKLI 189 (365)
T ss_pred cCceEEecccCCCCCCCCCCCCCcccchHHHHHHHHHHHHHcCC-cceeEeeccchHHHHHHHHH-----hChHhhceEE
Confidence 6999999999999998765321 66777888999999999 799999999999999 9999 999 7788
Q ss_pred EEeecc
Q 044659 80 LVVLVI 85 (169)
Q Consensus 80 ~~~~~~ 85 (169)
+++|..
T Consensus 190 LvsP~G 195 (365)
T KOG4409|consen 190 LVSPWG 195 (365)
T ss_pred Eecccc
Confidence 888754
No 38
>KOG1454 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.82 E-value=1.5e-19 Score=135.15 Aligned_cols=157 Identities=20% Similarity=0.196 Sum_probs=102.9
Q ss_pred hcCcEEEEeCCCCCCCCCCCC---CCChhhHHHHHHHHHHhcCCCCceEEEEEcchHHHH-HHhhccccCCCc---ceEE
Q 044659 7 ELGVYVLTFDRTGYGESDPKP---KRPVKIEAFDIQELANQLNLGHKFDVIGISILTYLF-GLVSNAHHTGIP---AGVA 79 (169)
Q Consensus 7 ~~g~~v~~~d~~G~G~s~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~ia-~~~~~~~~~~~p---~~~~ 79 (169)
..|++|+++|++|+|.++..+ ..+..++++.+..+....+. ++++++|||+||.+| .+|+ .+| .+++
T Consensus 84 ~~~~~v~aiDl~G~g~~s~~~~~~~y~~~~~v~~i~~~~~~~~~-~~~~lvghS~Gg~va~~~Aa-----~~P~~V~~lv 157 (326)
T KOG1454|consen 84 AKGLRVLAIDLPGHGYSSPLPRGPLYTLRELVELIRRFVKEVFV-EPVSLVGHSLGGIVALKAAA-----YYPETVDSLV 157 (326)
T ss_pred ccceEEEEEecCCCCcCCCCCCCCceehhHHHHHHHHHHHhhcC-cceEEEEeCcHHHHHHHHHH-----hCccccccee
Confidence 337999999999999544332 23488899999999998888 789999999999999 9999 888 6666
Q ss_pred ---EEeecchhh-h----------------hhhccc----c----hhHH--------------HHHHHHH-hc-----CC
Q 044659 80 ---LVVLVINYC-I----------------TCRLQG----A----HESL--------------HRDIMVH-LG-----TW 111 (169)
Q Consensus 80 ---~~~~~~~~~-~----------------~~~~~~----~----~~~~--------------~~~~~~~-~~-----~~ 111 (169)
++.+..... . +..... . ...+ ....... .. .+
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (326)
T KOG1454|consen 158 LLDLLGPPVYSTPKGIKGLRRLLDKFLSALELLIPLSLTEPVRLVSEGLLRCLKVVYTDPSRLLEKLLHLLSRPVKEHFH 237 (326)
T ss_pred eecccccccccCCcchhHHHHhhhhhccHhhhcCccccccchhheeHhhhcceeeeccccccchhhhhhheecccccchh
Confidence 444333210 0 000000 0 0000 0000000 00 00
Q ss_pred C---C------Cc--hhhhccCCCCC-CceEEEEeCCCCcchH--HHHHHHhCCCcEEEEecCCCceeeecC
Q 044659 112 E---F------DP--MEMENQFPNNE-ESVYLCQGHKDKLVPF--HRYRAKKLPRIRYHEGSAGGHLMIHEK 169 (169)
Q Consensus 112 ~---~------~~--~~~~~~~~~~~-~P~l~~~g~~D~~v~~--~~~~~~~~~~~~~~~~~~~gH~~~~e~ 169 (169)
+ . .. .....-.+.+. +|+++++|++|+++|. +..+.+..|++++++++++||..++|+
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~pvlii~G~~D~~~p~~~~~~~~~~~pn~~~~~I~~~gH~~h~e~ 309 (326)
T KOG1454|consen 238 RDARLSLFLELLGFDENLLSLIKKIWKCPVLIIWGDKDQIVPLELAEELKKKLPNAELVEIPGAGHLPHLER 309 (326)
T ss_pred hhheeeEEEeccCccchHHHhhccccCCceEEEEcCcCCccCHHHHHHHHhhCCCceEEEeCCCCcccccCC
Confidence 0 0 00 00011123344 9999999999999999 889999889999999999999999874
No 39
>KOG1455 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=99.82 E-value=2.4e-19 Score=128.99 Aligned_cols=160 Identities=14% Similarity=0.118 Sum_probs=108.7
Q ss_pred hhhhhhcCcEEEEeCCCCCCCCCCCCCC--ChhhHHHHHHHHHHhcC-----CCCceEEEEEcchHHHH-HHhhccccCC
Q 044659 2 QDFMDELGVYVLTFDRTGYGESDPKPKR--PVKIEAFDIQELANQLN-----LGHKFDVIGISILTYLF-GLVSNAHHTG 73 (169)
Q Consensus 2 ~~~l~~~g~~v~~~d~~G~G~s~~~~~~--~~~~~~~~~~~~~~~~~-----~~~~~~l~G~S~Gg~ia-~~~~~~~~~~ 73 (169)
+..|+..||.|+++|++|||.|++...+ +....++|+....+.+. .+.+..++||||||.|+ .++. +
T Consensus 75 a~~l~~~g~~v~a~D~~GhG~SdGl~~yi~~~d~~v~D~~~~~~~i~~~~e~~~lp~FL~GeSMGGAV~Ll~~~-----k 149 (313)
T KOG1455|consen 75 AKRLAKSGFAVYAIDYEGHGRSDGLHAYVPSFDLVVDDVISFFDSIKEREENKGLPRFLFGESMGGAVALLIAL-----K 149 (313)
T ss_pred HHHHHhCCCeEEEeeccCCCcCCCCcccCCcHHHHHHHHHHHHHHHhhccccCCCCeeeeecCcchHHHHHHHh-----h
Confidence 3567889999999999999999875433 47778888877776532 23579999999999999 8887 6
Q ss_pred Cc---ceEEEEeecchhh----------------------hhhhccc------chhHHHHHHHHHhcCCCC----C----
Q 044659 74 IP---AGVALVVLVINYC----------------------ITCRLQG------AHESLHRDIMVHLGTWEF----D---- 114 (169)
Q Consensus 74 ~p---~~~~~~~~~~~~~----------------------~~~~~~~------~~~~~~~~~~~~~~~~~~----~---- 114 (169)
.| .++++++|+.... |...... ..+...+.... ..+..+ .
T Consensus 150 ~p~~w~G~ilvaPmc~i~~~~kp~p~v~~~l~~l~~liP~wk~vp~~d~~~~~~kdp~~r~~~~-~npl~y~g~pRl~T~ 228 (313)
T KOG1455|consen 150 DPNFWDGAILVAPMCKISEDTKPHPPVISILTLLSKLIPTWKIVPTKDIIDVAFKDPEKRKILR-SDPLCYTGKPRLKTA 228 (313)
T ss_pred CCcccccceeeecccccCCccCCCcHHHHHHHHHHHhCCceeecCCccccccccCCHHHHHHhh-cCCceecCCccHHHH
Confidence 77 8888888765321 0100000 00000111100 000000 0
Q ss_pred ------chhhhccCCCCCCceEEEEeCCCCcchH--HHHHHHhCC--CcEEEEecCCCceeee
Q 044659 115 ------PMEMENQFPNNEESVYLCQGHKDKLVPF--HRYRAKKLP--RIRYHEGSAGGHLMIH 167 (169)
Q Consensus 115 ------~~~~~~~~~~~~~P~l~~~g~~D~~v~~--~~~~~~~~~--~~~~~~~~~~gH~~~~ 167 (169)
-.++...+..+++|.+++||++|.+..+ ++.+++..+ +.++..|||.-|-+..
T Consensus 229 ~ElLr~~~~le~~l~~vtvPflilHG~dD~VTDp~~Sk~Lye~A~S~DKTlKlYpGm~H~Ll~ 291 (313)
T KOG1455|consen 229 YELLRVTADLEKNLNEVTVPFLILHGTDDKVTDPKVSKELYEKASSSDKTLKLYPGMWHSLLS 291 (313)
T ss_pred HHHHHHHHHHHHhcccccccEEEEecCCCcccCcHHHHHHHHhccCCCCceeccccHHHHhhc
Confidence 0122334778999999999999999999 899999887 5789999999897763
No 40
>PLN02652 hydrolase; alpha/beta fold family protein
Probab=99.82 E-value=7.5e-19 Score=134.62 Aligned_cols=165 Identities=12% Similarity=0.075 Sum_probs=105.5
Q ss_pred hhhhhhcCcEEEEeCCCCCCCCCCCCC--CChhhHHHHHHHHHHhcCC---CCceEEEEEcchHHHH-HHhhccccCCCc
Q 044659 2 QDFMDELGVYVLTFDRTGYGESDPKPK--RPVKIEAFDIQELANQLNL---GHKFDVIGISILTYLF-GLVSNAHHTGIP 75 (169)
Q Consensus 2 ~~~l~~~g~~v~~~d~~G~G~s~~~~~--~~~~~~~~~~~~~~~~~~~---~~~~~l~G~S~Gg~ia-~~~~~~~~~~~p 75 (169)
.+.|.+.||+|+++|+||||.|+.... .+.+.+.+|+.++++.+.. +.+++++||||||.++ .++. +++..+
T Consensus 156 a~~L~~~Gy~V~~~D~rGhG~S~~~~~~~~~~~~~~~Dl~~~l~~l~~~~~~~~i~lvGhSmGG~ial~~a~--~p~~~~ 233 (395)
T PLN02652 156 AKQLTSCGFGVYAMDWIGHGGSDGLHGYVPSLDYVVEDTEAFLEKIRSENPGVPCFLFGHSTGGAVVLKAAS--YPSIED 233 (395)
T ss_pred HHHHHHCCCEEEEeCCCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhCCCCCEEEEEECHHHHHHHHHHh--ccCccc
Confidence 355778899999999999999976533 2477788888888887652 1479999999999999 6655 211112
Q ss_pred --ceEEEEeecchhhh------------hhhcc------cchh--HHHH---HHHHHh-cCCC----CC------c----
Q 044659 76 --AGVALVVLVINYCI------------TCRLQ------GAHE--SLHR---DIMVHL-GTWE----FD------P---- 115 (169)
Q Consensus 76 --~~~~~~~~~~~~~~------------~~~~~------~~~~--~~~~---~~~~~~-~~~~----~~------~---- 115 (169)
.++++.+|...... ..... .... ...+ ...... .... .. .
T Consensus 234 ~v~glVL~sP~l~~~~~~~~~~~~~~l~~~~~p~~~~~~~~~~~~~~s~~~~~~~~~~~dp~~~~g~i~~~~~~~~~~~~ 313 (395)
T PLN02652 234 KLEGIVLTSPALRVKPAHPIVGAVAPIFSLVAPRFQFKGANKRGIPVSRDPAALLAKYSDPLVYTGPIRVRTGHEILRIS 313 (395)
T ss_pred ccceEEEECcccccccchHHHHHHHHHHHHhCCCCcccCcccccCCcCCCHHHHHHHhcCCCcccCCchHHHHHHHHHHH
Confidence 67777777542110 00000 0000 0000 000000 0000 00 0
Q ss_pred hhhhccCCCCCCceEEEEeCCCCcchH--HHHHHHhCC--CcEEEEecCCCceeeec
Q 044659 116 MEMENQFPNNEESVYLCQGHKDKLVPF--HRYRAKKLP--RIRYHEGSAGGHLMIHE 168 (169)
Q Consensus 116 ~~~~~~~~~~~~P~l~~~g~~D~~v~~--~~~~~~~~~--~~~~~~~~~~gH~~~~e 168 (169)
..+...+.++++|+|+++|++|.++|+ ++.+++..+ +.+++.+|+++|.+++|
T Consensus 314 ~~l~~~L~~I~vPvLIi~G~~D~vvp~~~a~~l~~~~~~~~k~l~~~~ga~H~l~~e 370 (395)
T PLN02652 314 SYLTRNFKSVTVPFMVLHGTADRVTDPLASQDLYNEAASRHKDIKLYDGFLHDLLFE 370 (395)
T ss_pred HHHHhhcccCCCCEEEEEeCCCCCCCHHHHHHHHHhcCCCCceEEEECCCeEEeccC
Confidence 012234577899999999999999998 777877765 47899999999999876
No 41
>PLN02511 hydrolase
Probab=99.81 E-value=3e-19 Score=136.87 Aligned_cols=165 Identities=15% Similarity=0.152 Sum_probs=100.0
Q ss_pred hhhhcCcEEEEeCCCCCCCCCCCCCC-ChhhHHHHHHHHHHhcCC---CCceEEEEEcchHHHH-HHhhccccCCCc-ce
Q 044659 4 FMDELGVYVLTFDRTGYGESDPKPKR-PVKIEAFDIQELANQLNL---GHKFDVIGISILTYLF-GLVSNAHHTGIP-AG 77 (169)
Q Consensus 4 ~l~~~g~~v~~~d~~G~G~s~~~~~~-~~~~~~~~~~~~~~~~~~---~~~~~l~G~S~Gg~ia-~~~~~~~~~~~p-~~ 77 (169)
.+.+.||+|+++|+||||.|...... ....+.+|+.++++++.. ..+++++||||||.++ .++.. ++...+ .+
T Consensus 124 ~~~~~g~~vv~~d~rG~G~s~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~~~lvG~SlGg~i~~~yl~~-~~~~~~v~~ 202 (388)
T PLN02511 124 RARSKGWRVVVFNSRGCADSPVTTPQFYSASFTGDLRQVVDHVAGRYPSANLYAAGWSLGANILVNYLGE-EGENCPLSG 202 (388)
T ss_pred HHHHCCCEEEEEecCCCCCCCCCCcCEEcCCchHHHHHHHHHHHHHCCCCCEEEEEechhHHHHHHHHHh-cCCCCCceE
Confidence 34578999999999999998643221 244566777777777643 1579999999999999 77771 111222 44
Q ss_pred EEEEeecchhh--hhhhccc--------chhHH---HHH-------------------------HHHHh--cCCCCCc-h
Q 044659 78 VALVVLVINYC--ITCRLQG--------AHESL---HRD-------------------------IMVHL--GTWEFDP-M 116 (169)
Q Consensus 78 ~~~~~~~~~~~--~~~~~~~--------~~~~~---~~~-------------------------~~~~~--~~~~~~~-~ 116 (169)
++++++..... ...+... ....+ ... ..... ..+.+.. +
T Consensus 203 ~v~is~p~~l~~~~~~~~~~~~~~y~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~t~~~~gf~~~~ 282 (388)
T PLN02511 203 AVSLCNPFDLVIADEDFHKGFNNVYDKALAKALRKIFAKHALLFEGLGGEYNIPLVANAKTVRDFDDGLTRVSFGFKSVD 282 (388)
T ss_pred EEEECCCcCHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHhhCCCccCHHHHHhCCCHHHHHHhhhhhcCCCCCHH
Confidence 45444332210 0000000 00000 000 00000 0011110 0
Q ss_pred h------hhccCCCCCCceEEEEeCCCCcchH--H-HHHHHhCCCcEEEEecCCCceeeecC
Q 044659 117 E------MENQFPNNEESVYLCQGHKDKLVPF--H-RYRAKKLPRIRYHEGSAGGHLMIHEK 169 (169)
Q Consensus 117 ~------~~~~~~~~~~P~l~~~g~~D~~v~~--~-~~~~~~~~~~~~~~~~~~gH~~~~e~ 169 (169)
+ ....+.++++|+|+++|++|+++|. . ....+..+++++++++++||+.++|+
T Consensus 283 ~yy~~~s~~~~L~~I~vPtLiI~g~dDpi~p~~~~~~~~~~~~p~~~l~~~~~gGH~~~~E~ 344 (388)
T PLN02511 283 AYYSNSSSSDSIKHVRVPLLCIQAANDPIAPARGIPREDIKANPNCLLIVTPSGGHLGWVAG 344 (388)
T ss_pred HHHHHcCchhhhccCCCCeEEEEcCCCCcCCcccCcHhHHhcCCCEEEEECCCcceeccccC
Confidence 0 1123567999999999999999998 3 45677889999999999999999874
No 42
>PRK10985 putative hydrolase; Provisional
Probab=99.81 E-value=1.4e-18 Score=130.36 Aligned_cols=164 Identities=11% Similarity=0.135 Sum_probs=95.9
Q ss_pred hhhhhcCcEEEEeCCCCCCCCCCCC-CC----ChhhHHHHHHHHHHhcCCCCceEEEEEcchHHHH-HHhhccccCCCc-
Q 044659 3 DFMDELGVYVLTFDRTGYGESDPKP-KR----PVKIEAFDIQELANQLNLGHKFDVIGISILTYLF-GLVSNAHHTGIP- 75 (169)
Q Consensus 3 ~~l~~~g~~v~~~d~~G~G~s~~~~-~~----~~~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~ia-~~~~~~~~~~~p- 75 (169)
+.|.+.||+|+++|+||||.+.... .. ..+|....+..+.++++. .+++++||||||.++ .++.. .....+
T Consensus 81 ~~l~~~G~~v~~~d~rG~g~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~-~~~~~vG~S~GG~i~~~~~~~-~~~~~~~ 158 (324)
T PRK10985 81 EAAQKRGWLGVVMHFRGCSGEPNRLHRIYHSGETEDARFFLRWLQREFGH-VPTAAVGYSLGGNMLACLLAK-EGDDLPL 158 (324)
T ss_pred HHHHHCCCEEEEEeCCCCCCCccCCcceECCCchHHHHHHHHHHHHhCCC-CCEEEEEecchHHHHHHHHHh-hCCCCCc
Confidence 4578889999999999999774321 11 133333333444444555 689999999999987 66651 111112
Q ss_pred ceEEEEeecchhhh------h----hhcccchhHHHHHHHHHh----------------------------cC-CCCCc-
Q 044659 76 AGVALVVLVINYCI------T----CRLQGAHESLHRDIMVHL----------------------------GT-WEFDP- 115 (169)
Q Consensus 76 ~~~~~~~~~~~~~~------~----~~~~~~~~~~~~~~~~~~----------------------------~~-~~~~~- 115 (169)
.+++++++...... . .+.+.....+.+...... .. ..+..
T Consensus 159 ~~~v~i~~p~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~~~~~~g~~~~ 238 (324)
T PRK10985 159 DAAVIVSAPLMLEACSYRMEQGFSRVYQRYLLNLLKANAARKLAAYPGTLPINLAQLKSVRRLREFDDLITARIHGFADA 238 (324)
T ss_pred cEEEEEcCCCCHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHhccccccCCHHHHhcCCcHHHHhhhheeccCCCCCH
Confidence 56666665432110 0 000000000000000000 00 01100
Q ss_pred h------hhhccCCCCCCceEEEEeCCCCcchH--HHHHHHhCCCcEEEEecCCCceeeec
Q 044659 116 M------EMENQFPNNEESVYLCQGHKDKLVPF--HRYRAKKLPRIRYHEGSAGGHLMIHE 168 (169)
Q Consensus 116 ~------~~~~~~~~~~~P~l~~~g~~D~~v~~--~~~~~~~~~~~~~~~~~~~gH~~~~e 168 (169)
. .....+..+++|+++++|++|+++++ .+.+.+..+++++++++++||+.++|
T Consensus 239 ~~~y~~~~~~~~l~~i~~P~lii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~GH~~~~~ 299 (324)
T PRK10985 239 IDYYRQCSALPLLNQIRKPTLIIHAKDDPFMTHEVIPKPESLPPNVEYQLTEHGGHVGFVG 299 (324)
T ss_pred HHHHHHCChHHHHhCCCCCEEEEecCCCCCCChhhChHHHHhCCCeEEEECCCCCceeeCC
Confidence 0 00122467899999999999999988 56667788899999999999999986
No 43
>PRK14875 acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional
Probab=99.80 E-value=1.6e-18 Score=131.94 Aligned_cols=152 Identities=16% Similarity=0.218 Sum_probs=99.9
Q ss_pred CcEEEEeCCCCCCCCCCC-CCCChhhHHHHHHHHHHhcCCCCceEEEEEcchHHHH-HHhhccccCCCc---ceEEEEee
Q 044659 9 GVYVLTFDRTGYGESDPK-PKRPVKIEAFDIQELANQLNLGHKFDVIGISILTYLF-GLVSNAHHTGIP---AGVALVVL 83 (169)
Q Consensus 9 g~~v~~~d~~G~G~s~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~ia-~~~~~~~~~~~p---~~~~~~~~ 83 (169)
+|+|+++|+||||.|... ...++.++++++.++++.++. .+++++||||||.++ .++. ..| .+++++++
T Consensus 157 ~~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~lvG~S~Gg~~a~~~a~-----~~~~~v~~lv~~~~ 230 (371)
T PRK14875 157 GRPVIALDLPGHGASSKAVGAGSLDELAAAVLAFLDALGI-ERAHLVGHSMGGAVALRLAA-----RAPQRVASLTLIAP 230 (371)
T ss_pred CCEEEEEcCCCCCCCCCCCCCCCHHHHHHHHHHHHHhcCC-ccEEEEeechHHHHHHHHHH-----hCchheeEEEEECc
Confidence 599999999999999654 334599999999999999988 789999999999999 7887 666 66777765
Q ss_pred cchh------hhhhhccc-------------------chhHHHHHHHHH------------h-cCC---CCCchhhhccC
Q 044659 84 VINY------CITCRLQG-------------------AHESLHRDIMVH------------L-GTW---EFDPMEMENQF 122 (169)
Q Consensus 84 ~~~~------~~~~~~~~-------------------~~~~~~~~~~~~------------~-~~~---~~~~~~~~~~~ 122 (169)
.... +...+... ....+....... . ..+ ...........
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 310 (371)
T PRK14875 231 AGLGPEINGDYIDGFVAAESRRELKPVLELLFADPALVTRQMVEDLLKYKRLDGVDDALRALADALFAGGRQRVDLRDRL 310 (371)
T ss_pred CCcCcccchhHHHHhhcccchhHHHHHHHHHhcChhhCCHHHHHHHHHHhccccHHHHHHHHHHHhccCcccchhHHHHH
Confidence 4211 00000000 000000000000 0 000 00001112234
Q ss_pred CCCCCceEEEEeCCCCcchH--HHHHHHhCCCcEEEEecCCCceeeecC
Q 044659 123 PNNEESVYLCQGHKDKLVPF--HRYRAKKLPRIRYHEGSAGGHLMIHEK 169 (169)
Q Consensus 123 ~~~~~P~l~~~g~~D~~v~~--~~~~~~~~~~~~~~~~~~~gH~~~~e~ 169 (169)
..+++|+++++|++|.++|+ .+.+ .++.++.++|++||++++|+
T Consensus 311 ~~i~~Pvlii~g~~D~~vp~~~~~~l---~~~~~~~~~~~~gH~~~~e~ 356 (371)
T PRK14875 311 ASLAIPVLVIWGEQDRIIPAAHAQGL---PDGVAVHVLPGAGHMPQMEA 356 (371)
T ss_pred hcCCCCEEEEEECCCCccCHHHHhhc---cCCCeEEEeCCCCCChhhhC
Confidence 56899999999999999997 4333 34689999999999998874
No 44
>PRK00175 metX homoserine O-acetyltransferase; Provisional
Probab=99.79 E-value=2.4e-18 Score=131.64 Aligned_cols=72 Identities=14% Similarity=0.087 Sum_probs=57.7
Q ss_pred hcCcEEEEeCCCCC-CCCCC-C--------------CCCChhhHHHHHHHHHHhcCCCCc-eEEEEEcchHHHH-HHhhc
Q 044659 7 ELGVYVLTFDRTGY-GESDP-K--------------PKRPVKIEAFDIQELANQLNLGHK-FDVIGISILTYLF-GLVSN 68 (169)
Q Consensus 7 ~~g~~v~~~d~~G~-G~s~~-~--------------~~~~~~~~~~~~~~~~~~~~~~~~-~~l~G~S~Gg~ia-~~~~~ 68 (169)
..+|+|+++|++|+ |.|+. . +..+++++++++.++++++++ ++ ++++||||||.++ .++.
T Consensus 89 ~~~~~vi~~Dl~G~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~-~~~~~lvG~S~Gg~ia~~~a~- 166 (379)
T PRK00175 89 TDRYFVICSNVLGGCKGSTGPSSINPDTGKPYGSDFPVITIRDWVRAQARLLDALGI-TRLAAVVGGSMGGMQALEWAI- 166 (379)
T ss_pred ccceEEEeccCCCCCCCCCCCCCCCCCCCCcccCCCCcCCHHHHHHHHHHHHHHhCC-CCceEEEEECHHHHHHHHHHH-
Confidence 45899999999993 44432 1 134699999999999999999 67 5899999999999 8888
Q ss_pred cccCCCc---ceEEEEeec
Q 044659 69 AHHTGIP---AGVALVVLV 84 (169)
Q Consensus 69 ~~~~~~p---~~~~~~~~~ 84 (169)
.+| .+++++++.
T Consensus 167 ----~~p~~v~~lvl~~~~ 181 (379)
T PRK00175 167 ----DYPDRVRSALVIASS 181 (379)
T ss_pred ----hChHhhhEEEEECCC
Confidence 788 777777643
No 45
>PLN02894 hydrolase, alpha/beta fold family protein
Probab=99.79 E-value=1.3e-17 Score=128.33 Aligned_cols=158 Identities=16% Similarity=0.132 Sum_probs=99.4
Q ss_pred hhhcCcEEEEeCCCCCCCCCCCCCC--C----hhhHHHHHHHHHHhcCCCCceEEEEEcchHHHH-HHhhccccCCCc--
Q 044659 5 MDELGVYVLTFDRTGYGESDPKPKR--P----VKIEAFDIQELANQLNLGHKFDVIGISILTYLF-GLVSNAHHTGIP-- 75 (169)
Q Consensus 5 l~~~g~~v~~~d~~G~G~s~~~~~~--~----~~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~ia-~~~~~~~~~~~p-- 75 (169)
|.+ +|+|+++|+||||.|+..... . .....+++.++++.++. ++++++||||||.++ .++. .+|
T Consensus 128 L~~-~~~vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~i~~~~~~l~~-~~~~lvGhS~GG~la~~~a~-----~~p~~ 200 (402)
T PLN02894 128 LAS-RFRVIAIDQLGWGGSSRPDFTCKSTEETEAWFIDSFEEWRKAKNL-SNFILLGHSFGGYVAAKYAL-----KHPEH 200 (402)
T ss_pred HHh-CCEEEEECCCCCCCCCCCCcccccHHHHHHHHHHHHHHHHHHcCC-CCeEEEEECHHHHHHHHHHH-----hCchh
Confidence 444 599999999999999754321 1 12346677888888888 799999999999999 8888 777
Q ss_pred -ceEEEEeecchhhh-----hhhc---c-------------cc-h-----------hHHHHHHHH-HhcC----------
Q 044659 76 -AGVALVVLVINYCI-----TCRL---Q-------------GA-H-----------ESLHRDIMV-HLGT---------- 110 (169)
Q Consensus 76 -~~~~~~~~~~~~~~-----~~~~---~-------------~~-~-----------~~~~~~~~~-~~~~---------- 110 (169)
.++++++|...... .... . .. . ..+...... .+..
T Consensus 201 v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~gp~~~~l~~~~~~~~~~~~~~~~~l~~~ 280 (402)
T PLN02894 201 VQHLILVGPAGFSSESDDKSEWLTKFRATWKGAVLNHLWESNFTPQKIIRGLGPWGPNLVRRYTTARFGAHSTGDILSEE 280 (402)
T ss_pred hcEEEEECCccccCCcchhHHHHhhcchhHHHHHHHHHhhcCCCHHHHHHhccchhHHHHHHHHHHHhhhcccccccCcc
Confidence 77777765431100 0000 0 00 0 000000000 0000
Q ss_pred ------------------------CC-----CCchhhhccCCCCCCceEEEEeCCCCcchH-HHHHHHhCC-CcEEEEec
Q 044659 111 ------------------------WE-----FDPMEMENQFPNNEESVYLCQGHKDKLVPF-HRYRAKKLP-RIRYHEGS 159 (169)
Q Consensus 111 ------------------------~~-----~~~~~~~~~~~~~~~P~l~~~g~~D~~v~~-~~~~~~~~~-~~~~~~~~ 159 (169)
+. .....+...+..+++|+++++|++|.+.+. ...+.+..+ ..+++.+|
T Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~I~vP~liI~G~~D~i~~~~~~~~~~~~~~~~~~~~i~ 360 (402)
T PLN02894 281 ESKLLTDYVYHTLAAKASGELCLKYIFSFGAFARKPLLESASEWKVPTTFIYGRHDWMNYEGAVEARKRMKVPCEIIRVP 360 (402)
T ss_pred hhhHHHHHHHHhhcCCCchHHHHHHhccCchhhcchHhhhcccCCCCEEEEEeCCCCCCcHHHHHHHHHcCCCCcEEEeC
Confidence 00 000111223566899999999999998877 555555554 58999999
Q ss_pred CCCceeeecC
Q 044659 160 AGGHLMIHEK 169 (169)
Q Consensus 160 ~~gH~~~~e~ 169 (169)
++||++++|+
T Consensus 361 ~aGH~~~~E~ 370 (402)
T PLN02894 361 QGGHFVFLDN 370 (402)
T ss_pred CCCCeeeccC
Confidence 9999999874
No 46
>TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily.
Probab=99.78 E-value=3.2e-18 Score=125.66 Aligned_cols=160 Identities=18% Similarity=0.099 Sum_probs=101.2
Q ss_pred hhhhhhcCcEEEEeCCCCCCCCCCCCCCChhhHHHHHHHHHHhc-----CCCCceEEEEEcchHHHH-HHhhccccCCCc
Q 044659 2 QDFMDELGVYVLTFDRTGYGESDPKPKRPVKIEAFDIQELANQL-----NLGHKFDVIGISILTYLF-GLVSNAHHTGIP 75 (169)
Q Consensus 2 ~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~l~G~S~Gg~ia-~~~~~~~~~~~p 75 (169)
.+.|.+.||+|+++|++|||.|.... .++.++.+|+.+.++.+ +. ++++++||||||.++ .++. ..+
T Consensus 50 a~~l~~~G~~v~~~Dl~G~G~S~~~~-~~~~~~~~d~~~~~~~l~~~~~g~-~~i~l~G~S~Gg~~a~~~a~-----~~~ 122 (274)
T TIGR03100 50 ARRLAEAGFPVLRFDYRGMGDSEGEN-LGFEGIDADIAAAIDAFREAAPHL-RRIVAWGLCDAASAALLYAP-----ADL 122 (274)
T ss_pred HHHHHHCCCEEEEeCCCCCCCCCCCC-CCHHHHHHHHHHHHHHHHhhCCCC-CcEEEEEECHHHHHHHHHhh-----hCC
Confidence 35677889999999999999987542 35667777877777765 34 679999999999999 7765 333
Q ss_pred --ceEEEEeecchhhh--------hh-------------hcccchh--HHHHHHHHHhcCCC--------C-Cchhhhcc
Q 044659 76 --AGVALVVLVINYCI--------TC-------------RLQGAHE--SLHRDIMVHLGTWE--------F-DPMEMENQ 121 (169)
Q Consensus 76 --~~~~~~~~~~~~~~--------~~-------------~~~~~~~--~~~~~~~~~~~~~~--------~-~~~~~~~~ 121 (169)
.++++++|...... .. +..+..+ ...+.+......|. . ....+...
T Consensus 123 ~v~~lil~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (274)
T TIGR03100 123 RVAGLVLLNPWVRTEAAQAASRIRHYYLGQLLSADFWRKLLSGEVNLGSSLRGLGDALLKARQKGDEVAHGGLAERMKAG 202 (274)
T ss_pred CccEEEEECCccCCcccchHHHHHHHHHHHHhChHHHHHhcCCCccHHHHHHHHHHHHHhhhhcCCCcccchHHHHHHHH
Confidence 88888887643110 00 0000000 00000000000010 0 01111223
Q ss_pred CCCCCCceEEEEeCCCCcchH-H------HHHHHhC--CCcEEEEecCCCceeeec
Q 044659 122 FPNNEESVYLCQGHKDKLVPF-H------RYRAKKL--PRIRYHEGSAGGHLMIHE 168 (169)
Q Consensus 122 ~~~~~~P~l~~~g~~D~~v~~-~------~~~~~~~--~~~~~~~~~~~gH~~~~e 168 (169)
+..+++|+++++|++|...+. . ....+.+ ++++++.+|+++|++..|
T Consensus 203 l~~~~~P~ll~~g~~D~~~~~~~~~~~~~~~~~~~l~~~~v~~~~~~~~~H~l~~e 258 (274)
T TIGR03100 203 LERFQGPVLFILSGNDLTAQEFADSVLGEPAWRGALEDPGIERVEIDGADHTFSDR 258 (274)
T ss_pred HHhcCCcEEEEEcCcchhHHHHHHHhccChhhHHHhhcCCeEEEecCCCCcccccH
Confidence 446789999999999998765 3 4555545 789999999999988654
No 47
>KOG2984 consensus Predicted hydrolase [General function prediction only]
Probab=99.77 E-value=2.2e-18 Score=117.45 Aligned_cols=150 Identities=16% Similarity=0.097 Sum_probs=104.2
Q ss_pred CcEEEEeCCCCCCCCCCCCCC-C---hhhHHHHHHHHHHhcCCCCceEEEEEcchHHHH-HHhhccccCCCc---ceEEE
Q 044659 9 GVYVLTFDRTGYGESDPKPKR-P---VKIEAFDIQELANQLNLGHKFDVIGISILTYLF-GLVSNAHHTGIP---AGVAL 80 (169)
Q Consensus 9 g~~v~~~d~~G~G~s~~~~~~-~---~~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~ia-~~~~~~~~~~~p---~~~~~ 80 (169)
.+++++.|.||||.|.++... . ..+-+++...++++++. +++.++|+|-||..+ ..|+ +.+ .++++
T Consensus 71 ~~TivawDPpGYG~SrPP~Rkf~~~ff~~Da~~avdLM~aLk~-~~fsvlGWSdGgiTalivAa-----k~~e~v~rmii 144 (277)
T KOG2984|consen 71 QVTIVAWDPPGYGTSRPPERKFEVQFFMKDAEYAVDLMEALKL-EPFSVLGWSDGGITALIVAA-----KGKEKVNRMII 144 (277)
T ss_pred ceEEEEECCCCCCCCCCCcccchHHHHHHhHHHHHHHHHHhCC-CCeeEeeecCCCeEEEEeec-----cChhhhhhhee
Confidence 499999999999999875433 3 45555566778899999 899999999999999 8888 776 55666
Q ss_pred Eeecchh---------------hhhhhcccch------hH-------HHHHHHHHhcCCCCCch-hhhccCCCCCCceEE
Q 044659 81 VVLVINY---------------CITCRLQGAH------ES-------LHRDIMVHLGTWEFDPM-EMENQFPNNEESVYL 131 (169)
Q Consensus 81 ~~~~~~~---------------~~~~~~~~~~------~~-------~~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~l~ 131 (169)
.+..... .|....+... +. |........ .+... ..+..++.++||++|
T Consensus 145 wga~ayvn~~~~ma~kgiRdv~kWs~r~R~P~e~~Yg~e~f~~~wa~wvD~v~qf~---~~~dG~fCr~~lp~vkcPtli 221 (277)
T KOG2984|consen 145 WGAAAYVNHLGAMAFKGIRDVNKWSARGRQPYEDHYGPETFRTQWAAWVDVVDQFH---SFCDGRFCRLVLPQVKCPTLI 221 (277)
T ss_pred ecccceecchhHHHHhchHHHhhhhhhhcchHHHhcCHHHHHHHHHHHHHHHHHHh---hcCCCchHhhhcccccCCeeE
Confidence 6543321 0111111000 00 111111111 11111 124457789999999
Q ss_pred EEeCCCCcchH--HHHHHHhCCCcEEEEecCCCceeee
Q 044659 132 CQGHKDKLVPF--HRYRAKKLPRIRYHEGSAGGHLMIH 167 (169)
Q Consensus 132 ~~g~~D~~v~~--~~~~~~~~~~~~~~~~~~~gH~~~~ 167 (169)
+||++|++++. ...+....+.+++.+.|.++|.+++
T Consensus 222 ~hG~kDp~~~~~hv~fi~~~~~~a~~~~~peGkHn~hL 259 (277)
T KOG2984|consen 222 MHGGKDPFCGDPHVCFIPVLKSLAKVEIHPEGKHNFHL 259 (277)
T ss_pred eeCCcCCCCCCCCccchhhhcccceEEEccCCCcceee
Confidence 99999999999 8888889999999999999999986
No 48
>TIGR01607 PST-A Plasmodium subtelomeric family (PST-A). These genes are preferentially located in the subtelomeric regions of the chromosomes of both P. falciparum and P. yoelii.
Probab=99.76 E-value=8.6e-18 Score=126.44 Aligned_cols=166 Identities=16% Similarity=0.179 Sum_probs=100.3
Q ss_pred hhhhhhcCcEEEEeCCCCCCCCCCCC---C--CChhhHHHHHHHHHHhcCC-----------------------CCceEE
Q 044659 2 QDFMDELGVYVLTFDRTGYGESDPKP---K--RPVKIEAFDIQELANQLNL-----------------------GHKFDV 53 (169)
Q Consensus 2 ~~~l~~~g~~v~~~d~~G~G~s~~~~---~--~~~~~~~~~~~~~~~~~~~-----------------------~~~~~l 53 (169)
.+.|.+.||+|+++|+||||.|+... . .++++.++|+..+++.+.. +.++++
T Consensus 67 ~~~l~~~G~~V~~~D~rGHG~S~~~~~~~g~~~~~~~~v~Dl~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l 146 (332)
T TIGR01607 67 IENFNKNGYSVYGLDLQGHGESDGLQNLRGHINCFDDLVYDVIQYMNRINDSIILENETKSDDESYDIVNTKENRLPMYI 146 (332)
T ss_pred HHHHHHCCCcEEEecccccCCCccccccccchhhHHHHHHHHHHHHHHhhhhhccccccccccccccccccccCCCceeE
Confidence 45678889999999999999987532 1 2488888888888876421 257999
Q ss_pred EEEcchHHHH-HHhhcc-ccC----CCc-ceEEEEeecchh-----------h--h-------hhhcc----cc---hh-
Q 044659 54 IGISILTYLF-GLVSNA-HHT----GIP-AGVALVVLVINY-----------C--I-------TCRLQ----GA---HE- 98 (169)
Q Consensus 54 ~G~S~Gg~ia-~~~~~~-~~~----~~p-~~~~~~~~~~~~-----------~--~-------~~~~~----~~---~~- 98 (169)
+||||||.++ .++... ++. ... .++++++|+... . . ..+.. .. ..
T Consensus 147 ~GhSmGg~i~~~~~~~~~~~~~~~~~~~i~g~i~~s~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~ 226 (332)
T TIGR01607 147 IGLSMGGNIALRLLELLGKSNENNDKLNIKGCISLSGMISIKSVGSDDSFKFKYFYLPVMNFMSRVFPTFRISKKIRYEK 226 (332)
T ss_pred eeccCccHHHHHHHHHhccccccccccccceEEEeccceEEecccCCCcchhhhhHHHHHHHHHHHCCcccccCcccccc
Confidence 9999999999 766410 100 012 566666664311 0 0 00000 00 00
Q ss_pred -HHHHHHHHHhcCCCC----Cch----------hhhccCCCC--CCceEEEEeCCCCcchH--HHHHHHhC--CCcEEEE
Q 044659 99 -SLHRDIMVHLGTWEF----DPM----------EMENQFPNN--EESVYLCQGHKDKLVPF--HRYRAKKL--PRIRYHE 157 (169)
Q Consensus 99 -~~~~~~~~~~~~~~~----~~~----------~~~~~~~~~--~~P~l~~~g~~D~~v~~--~~~~~~~~--~~~~~~~ 157 (169)
....+... ...+.. ... .+......+ ++|+|+++|++|.++++ .+.+.+.. ++.++++
T Consensus 227 ~~~~~~~~~-~Dp~~~~~~~s~~~~~~l~~~~~~~~~~~~~i~~~~P~Lii~G~~D~vv~~~~~~~~~~~~~~~~~~l~~ 305 (332)
T TIGR01607 227 SPYVNDIIK-FDKFRYDGGITFNLASELIKATDTLDCDIDYIPKDIPILFIHSKGDCVCSYEGTVSFYNKLSISNKELHT 305 (332)
T ss_pred ChhhhhHHh-cCccccCCcccHHHHHHHHHHHHHHHhhHhhCCCCCCEEEEEeCCCCccCHHHHHHHHHhccCCCcEEEE
Confidence 00000000 000000 000 011122334 78999999999999999 66676655 4689999
Q ss_pred ecCCCceeeec
Q 044659 158 GSAGGHLMIHE 168 (169)
Q Consensus 158 ~~~~gH~~~~e 168 (169)
+|+++|.++.|
T Consensus 306 ~~g~~H~i~~E 316 (332)
T TIGR01607 306 LEDMDHVITIE 316 (332)
T ss_pred ECCCCCCCccC
Confidence 99999999876
No 49
>PRK05077 frsA fermentation/respiration switch protein; Reviewed
Probab=99.76 E-value=5.8e-17 Score=125.06 Aligned_cols=152 Identities=16% Similarity=0.107 Sum_probs=93.6
Q ss_pred hhhhhcCcEEEEeCCCCCCCCCCCCC-CChhhHHHHHHHHHHhc---CCCCceEEEEEcchHHHH-HHhhccccCCCc--
Q 044659 3 DFMDELGVYVLTFDRTGYGESDPKPK-RPVKIEAFDIQELANQL---NLGHKFDVIGISILTYLF-GLVSNAHHTGIP-- 75 (169)
Q Consensus 3 ~~l~~~g~~v~~~d~~G~G~s~~~~~-~~~~~~~~~~~~~~~~~---~~~~~~~l~G~S~Gg~ia-~~~~~~~~~~~p-- 75 (169)
+.|.++||+|+++|+||+|.|...+. .........+.+.+... +. +++.++||||||.++ .++. ..|
T Consensus 216 ~~La~~Gy~vl~~D~pG~G~s~~~~~~~d~~~~~~avld~l~~~~~vd~-~ri~l~G~S~GG~~Al~~A~-----~~p~r 289 (414)
T PRK05077 216 DYLAPRGIAMLTIDMPSVGFSSKWKLTQDSSLLHQAVLNALPNVPWVDH-TRVAAFGFRFGANVAVRLAY-----LEPPR 289 (414)
T ss_pred HHHHhCCCEEEEECCCCCCCCCCCCccccHHHHHHHHHHHHHhCcccCc-ccEEEEEEChHHHHHHHHHH-----hCCcC
Confidence 45788899999999999999865322 22333334454555444 34 789999999999999 7776 555
Q ss_pred -ceEEEEeecchhhh--hhhcccchhHHHHHHHH-HhcC-----------C-CCCchhhhccCCCCCCceEEEEeCCCCc
Q 044659 76 -AGVALVVLVINYCI--TCRLQGAHESLHRDIMV-HLGT-----------W-EFDPMEMENQFPNNEESVYLCQGHKDKL 139 (169)
Q Consensus 76 -~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~-~~~~-----------~-~~~~~~~~~~~~~~~~P~l~~~g~~D~~ 139 (169)
++++++++...... ......... +..+... ..+. + .+.......-...+++|+|+++|++|++
T Consensus 290 i~a~V~~~~~~~~~~~~~~~~~~~p~-~~~~~la~~lg~~~~~~~~l~~~l~~~sl~~~~~l~~~i~~PvLiI~G~~D~i 368 (414)
T PRK05077 290 LKAVACLGPVVHTLLTDPKRQQQVPE-MYLDVLASRLGMHDASDEALRVELNRYSLKVQGLLGRRCPTPMLSGYWKNDPF 368 (414)
T ss_pred ceEEEEECCccchhhcchhhhhhchH-HHHHHHHHHhCCCCCChHHHHHHhhhccchhhhhhccCCCCcEEEEecCCCCC
Confidence 66777776543211 000000000 0000000 0000 0 0010000000146889999999999999
Q ss_pred chH--HHHHHHhCCCcEEEEecCC
Q 044659 140 VPF--HRYRAKKLPRIRYHEGSAG 161 (169)
Q Consensus 140 v~~--~~~~~~~~~~~~~~~~~~~ 161 (169)
+|+ .+.+.+..++.+++.+|++
T Consensus 369 vP~~~a~~l~~~~~~~~l~~i~~~ 392 (414)
T PRK05077 369 SPEEDSRLIASSSADGKLLEIPFK 392 (414)
T ss_pred CCHHHHHHHHHhCCCCeEEEccCC
Confidence 999 7788888999999999986
No 50
>TIGR01838 PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, class I. This model represents the class I subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs with three to five carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=99.76 E-value=2.5e-17 Score=129.56 Aligned_cols=162 Identities=12% Similarity=0.117 Sum_probs=101.5
Q ss_pred hhhhhhcCcEEEEeCCCCCCCCCCCCCC---ChhhHHHHHHHHHHhcCCCCceEEEEEcchHHHH-H----HhhccccCC
Q 044659 2 QDFMDELGVYVLTFDRTGYGESDPKPKR---PVKIEAFDIQELANQLNLGHKFDVIGISILTYLF-G----LVSNAHHTG 73 (169)
Q Consensus 2 ~~~l~~~g~~v~~~d~~G~G~s~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~ia-~----~~~~~~~~~ 73 (169)
.+.|.+.||+|+++|++|+|.+...... ..+...+.++.+++..+. ++++++||||||.++ . +++ .
T Consensus 213 v~~L~~qGf~V~~iDwrgpg~s~~~~~~ddY~~~~i~~al~~v~~~~g~-~kv~lvG~cmGGtl~a~ala~~aa-----~ 286 (532)
T TIGR01838 213 VRWLVEQGHTVFVISWRNPDASQADKTFDDYIRDGVIAALEVVEAITGE-KQVNCVGYCIGGTLLSTALAYLAA-----R 286 (532)
T ss_pred HHHHHHCCcEEEEEECCCCCcccccCChhhhHHHHHHHHHHHHHHhcCC-CCeEEEEECcCcHHHHHHHHHHHH-----h
Confidence 4568888999999999999988543221 133455567777777777 799999999999985 2 233 2
Q ss_pred C-c---ceEEEEeecchhhh----------------hhhc--ccchh-------------------HHHHHHHHHhc---
Q 044659 74 I-P---AGVALVVLVINYCI----------------TCRL--QGAHE-------------------SLHRDIMVHLG--- 109 (169)
Q Consensus 74 ~-p---~~~~~~~~~~~~~~----------------~~~~--~~~~~-------------------~~~~~~~~~~~--- 109 (169)
. + .++++++....+.. +... .+..+ .+.+++.....
T Consensus 287 ~~~~rv~slvll~t~~Df~~~G~l~~f~~~~~~~~~e~~~~~~G~lpg~~m~~~F~~lrp~~l~w~~~v~~yl~g~~~~~ 366 (532)
T TIGR01838 287 GDDKRIKSATFFTTLLDFSDPGELGVFVDEEIVAGIERQNGGGGYLDGRQMAVTFSLLRENDLIWNYYVDNYLKGKSPVP 366 (532)
T ss_pred CCCCccceEEEEecCcCCCCcchhhhhcCchhHHHHHHHHHhcCCCCHHHHHHHHHhcChhhHHHHHHHHHHhcCCCccc
Confidence 2 3 56666654333210 0000 00000 00000000000
Q ss_pred ----CCCCCc----------------------------hhhhccCCCCCCceEEEEeCCCCcchH--HHHHHHhCCCcEE
Q 044659 110 ----TWEFDP----------------------------MEMENQFPNNEESVYLCQGHKDKLVPF--HRYRAKKLPRIRY 155 (169)
Q Consensus 110 ----~~~~~~----------------------------~~~~~~~~~~~~P~l~~~g~~D~~v~~--~~~~~~~~~~~~~ 155 (169)
.|..+. ......+..+++|+++++|++|.++|. ...+.+.+++.+.
T Consensus 367 fdll~Wn~D~t~lP~~~~~~~lr~ly~~N~L~~G~~~v~g~~~dL~~I~vPvLvV~G~~D~IvP~~sa~~l~~~i~~~~~ 446 (532)
T TIGR01838 367 FDLLFWNSDSTNLPGKMHNFYLRNLYLQNALTTGGLEVCGVRLDLSKVKVPVYIIATREDHIAPWQSAYRGAALLGGPKT 446 (532)
T ss_pred hhHHHHhccCccchHHHHHHHHHHHHhcCCCcCCeeEECCEecchhhCCCCEEEEeeCCCCcCCHHHHHHHHHHCCCCEE
Confidence 011110 001112456999999999999999998 7888899999999
Q ss_pred EEecCCCceeeecC
Q 044659 156 HEGSAGGHLMIHEK 169 (169)
Q Consensus 156 ~~~~~~gH~~~~e~ 169 (169)
++++++||++++++
T Consensus 447 ~vL~~sGHi~~ien 460 (532)
T TIGR01838 447 FVLGESGHIAGVVN 460 (532)
T ss_pred EEECCCCCchHhhC
Confidence 99999999999875
No 51
>PLN02980 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding
Probab=99.75 E-value=2.5e-17 Score=143.98 Aligned_cols=155 Identities=14% Similarity=0.120 Sum_probs=103.3
Q ss_pred CcEEEEeCCCCCCCCCCCC---------CCChhhHHHHHHHHHHhcCCCCceEEEEEcchHHHH-HHhhccccCCCc---
Q 044659 9 GVYVLTFDRTGYGESDPKP---------KRPVKIEAFDIQELANQLNLGHKFDVIGISILTYLF-GLVSNAHHTGIP--- 75 (169)
Q Consensus 9 g~~v~~~d~~G~G~s~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~ia-~~~~~~~~~~~p--- 75 (169)
+|+|+++|+||||.|+... ..++++.++++.+++++++. ++++|+||||||.++ .++. .+|
T Consensus 1397 ~~rVi~~Dl~G~G~S~~~~~~~~~~~~~~~si~~~a~~l~~ll~~l~~-~~v~LvGhSmGG~iAl~~A~-----~~P~~V 1470 (1655)
T PLN02980 1397 SARCISIDLPGHGGSKIQNHAKETQTEPTLSVELVADLLYKLIEHITP-GKVTLVGYSMGARIALYMAL-----RFSDKI 1470 (1655)
T ss_pred CCEEEEEcCCCCCCCCCccccccccccccCCHHHHHHHHHHHHHHhCC-CCEEEEEECHHHHHHHHHHH-----hChHhh
Confidence 5999999999999986432 23488899999999999988 799999999999999 8888 777
Q ss_pred ceEEEEeecchhh----h-----------hhhcccchh----HHH---------------HHHHH-Hhc-----------
Q 044659 76 AGVALVVLVINYC----I-----------TCRLQGAHE----SLH---------------RDIMV-HLG----------- 109 (169)
Q Consensus 76 ~~~~~~~~~~~~~----~-----------~~~~~~~~~----~~~---------------~~~~~-~~~----------- 109 (169)
.+++++++..... + ..+...... .+. ..... ...
T Consensus 1471 ~~lVlis~~p~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 1550 (1655)
T PLN02980 1471 EGAVIISGSPGLKDEVARKIRSAKDDSRARMLIDHGLEIFLENWYSGELWKSLRNHPHFNKIVASRLLHKDVPSLAKLLS 1550 (1655)
T ss_pred CEEEEECCCCccCchHHHHHHhhhhhHHHHHHHhhhHHHHHHHhccHHHhhhhccCHHHHHHHHHHHhcCCHHHHHHHHH
Confidence 6677775432110 0 000000000 000 00000 000
Q ss_pred CCC-CCchhhhccCCCCCCceEEEEeCCCCcchH-HHHHHHhCCC------------cEEEEecCCCceeeecC
Q 044659 110 TWE-FDPMEMENQFPNNEESVYLCQGHKDKLVPF-HRYRAKKLPR------------IRYHEGSAGGHLMIHEK 169 (169)
Q Consensus 110 ~~~-~~~~~~~~~~~~~~~P~l~~~g~~D~~v~~-~~~~~~~~~~------------~~~~~~~~~gH~~~~e~ 169 (169)
.+. .....+...+..+++|+|+++|++|..++. .+.+.+.+++ ++++++|++||++++|+
T Consensus 1551 ~~~~~~~~dl~~~L~~I~~PtLlI~Ge~D~~~~~~a~~~~~~i~~a~~~~~~~~~~~a~lvvI~~aGH~~~lE~ 1624 (1655)
T PLN02980 1551 DLSIGRQPSLWEDLKQCDTPLLLVVGEKDVKFKQIAQKMYREIGKSKESGNDKGKEIIEIVEIPNCGHAVHLEN 1624 (1655)
T ss_pred HhhhcccchHHHHHhhCCCCEEEEEECCCCccHHHHHHHHHHccccccccccccccceEEEEECCCCCchHHHC
Confidence 000 000011223567899999999999998876 7777777765 48999999999999875
No 52
>PRK05855 short chain dehydrogenase; Validated
Probab=99.75 E-value=2e-17 Score=132.48 Aligned_cols=64 Identities=13% Similarity=0.104 Sum_probs=53.1
Q ss_pred hhhhhcCcEEEEeCCCCCCCCCCCC---CCChhhHHHHHHHHHHhcCCCCceEEEEEcchHHHH-HHhh
Q 044659 3 DFMDELGVYVLTFDRTGYGESDPKP---KRPVKIEAFDIQELANQLNLGHKFDVIGISILTYLF-GLVS 67 (169)
Q Consensus 3 ~~l~~~g~~v~~~d~~G~G~s~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~ia-~~~~ 67 (169)
+.| ..+|+|+++|+||||.|+... ..+.+++++|+..++++++.+++++|+||||||.++ .++.
T Consensus 46 ~~L-~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~a~dl~~~i~~l~~~~~~~lvGhS~Gg~~a~~~a~ 113 (582)
T PRK05855 46 PLL-ADRFRVVAYDVRGAGRSSAPKRTAAYTLARLADDFAAVIDAVSPDRPVHLLAHDWGSIQGWEAVT 113 (582)
T ss_pred HHh-hcceEEEEecCCCCCCCCCCCcccccCHHHHHHHHHHHHHHhCCCCcEEEEecChHHHHHHHHHh
Confidence 344 458999999999999997543 235999999999999999873459999999999999 7666
No 53
>KOG1552 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.73 E-value=2.5e-17 Score=116.38 Aligned_cols=140 Identities=21% Similarity=0.191 Sum_probs=102.0
Q ss_pred cCcEEEEeCCCCCCCCCCCCCC-C-hhhHHHHHHHHHHhcC-CCCceEEEEEcchHHHH-HHhhccccCCCc-ceEEEEe
Q 044659 8 LGVYVLTFDRTGYGESDPKPKR-P-VKIEAFDIQELANQLN-LGHKFDVIGISILTYLF-GLVSNAHHTGIP-AGVALVV 82 (169)
Q Consensus 8 ~g~~v~~~d~~G~G~s~~~~~~-~-~~~~~~~~~~~~~~~~-~~~~~~l~G~S~Gg~ia-~~~~~~~~~~~p-~~~~~~~ 82 (169)
.+++++.+|+.|+|.|.+.+.. + .+|...-.+.+.+..+ . ++++|+|+|+|+..+ .++. +.| .++++.+
T Consensus 87 ln~nv~~~DYSGyG~S~G~psE~n~y~Di~avye~Lr~~~g~~-~~Iil~G~SiGt~~tv~Las-----r~~~~alVL~S 160 (258)
T KOG1552|consen 87 LNCNVVSYDYSGYGRSSGKPSERNLYADIKAVYEWLRNRYGSP-ERIILYGQSIGTVPTVDLAS-----RYPLAAVVLHS 160 (258)
T ss_pred ccceEEEEecccccccCCCcccccchhhHHHHHHHHHhhcCCC-ceEEEEEecCCchhhhhHhh-----cCCcceEEEec
Confidence 4899999999999999876543 3 4444444444555553 4 899999999999999 8888 777 9999999
Q ss_pred ecchhhhhhhcccchhHHHHHHHHHhcCCCCCchhhhccCCCCCCceEEEEeCCCCcchH--HHHHHHhCCCc-EEEEec
Q 044659 83 LVINYCITCRLQGAHESLHRDIMVHLGTWEFDPMEMENQFPNNEESVYLCQGHKDKLVPF--HRYRAKKLPRI-RYHEGS 159 (169)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~g~~D~~v~~--~~~~~~~~~~~-~~~~~~ 159 (169)
|..+..+..+..... . |-++.-......+.+++|+|++||++|.+++. ...+.+..++. +..++.
T Consensus 161 Pf~S~~rv~~~~~~~-----------~-~~~d~f~~i~kI~~i~~PVLiiHgtdDevv~~sHg~~Lye~~k~~~epl~v~ 228 (258)
T KOG1552|consen 161 PFTSGMRVAFPDTKT-----------T-YCFDAFPNIEKISKITCPVLIIHGTDDEVVDFSHGKALYERCKEKVEPLWVK 228 (258)
T ss_pred cchhhhhhhccCcce-----------E-EeeccccccCcceeccCCEEEEecccCceecccccHHHHHhccccCCCcEEe
Confidence 988763322221110 0 11111111334667888999999999999999 89999999875 888999
Q ss_pred CCCcee
Q 044659 160 AGGHLM 165 (169)
Q Consensus 160 ~~gH~~ 165 (169)
|+||.-
T Consensus 229 g~gH~~ 234 (258)
T KOG1552|consen 229 GAGHND 234 (258)
T ss_pred cCCCcc
Confidence 999974
No 54
>PRK10566 esterase; Provisional
Probab=99.72 E-value=2.5e-16 Score=113.80 Aligned_cols=157 Identities=15% Similarity=0.108 Sum_probs=86.1
Q ss_pred hhhhhhcCcEEEEeCCCCCCCCCCCC-CCCh-------hhHHHHHHHHHHh---cC-C-CCceEEEEEcchHHHH-HHhh
Q 044659 2 QDFMDELGVYVLTFDRTGYGESDPKP-KRPV-------KIEAFDIQELANQ---LN-L-GHKFDVIGISILTYLF-GLVS 67 (169)
Q Consensus 2 ~~~l~~~g~~v~~~d~~G~G~s~~~~-~~~~-------~~~~~~~~~~~~~---~~-~-~~~~~l~G~S~Gg~ia-~~~~ 67 (169)
.+.|++.||+|+++|+||||.+.... .... .+..+|+.++++. .+ + .++++++||||||.++ .++.
T Consensus 47 ~~~l~~~G~~v~~~d~~g~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~v~G~S~Gg~~al~~~~ 126 (249)
T PRK10566 47 AVALAQAGFRVIMPDAPMHGARFSGDEARRLNHFWQILLQNMQEFPTLRAAIREEGWLLDDRLAVGGASMGGMTALGIMA 126 (249)
T ss_pred HHHHHhCCCEEEEecCCcccccCCCccccchhhHHHHHHHHHHHHHHHHHHHHhcCCcCccceeEEeecccHHHHHHHHH
Confidence 45678889999999999999763221 1111 1123333333332 21 2 1689999999999999 7777
Q ss_pred ccccCCCc--ceEEEEeecchh--hhhh-hcccch--hHHHHHHHHHhcCC-CCCchhhhccCCCC-CCceEEEEeCCCC
Q 044659 68 NAHHTGIP--AGVALVVLVINY--CITC-RLQGAH--ESLHRDIMVHLGTW-EFDPMEMENQFPNN-EESVYLCQGHKDK 138 (169)
Q Consensus 68 ~~~~~~~p--~~~~~~~~~~~~--~~~~-~~~~~~--~~~~~~~~~~~~~~-~~~~~~~~~~~~~~-~~P~l~~~g~~D~ 138 (169)
..| ...+.+.+.... .... +..... .............+ .+++ ......+ ++|+|+++|++|.
T Consensus 127 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~i~~~P~Lii~G~~D~ 198 (249)
T PRK10566 127 -----RHPWVKCVASLMGSGYFTSLARTLFPPLIPETAAQQAEFNNIVAPLAEWEV---THQLEQLADRPLLLWHGLADD 198 (249)
T ss_pred -----hCCCeeEEEEeeCcHHHHHHHHHhcccccccccccHHHHHHHHHHHhhcCh---hhhhhhcCCCCEEEEEcCCCC
Confidence 666 333333221111 0000 000000 00000111000000 1111 1122333 6789999999999
Q ss_pred cchH--HHHHHHhCC------CcEEEEecCCCceee
Q 044659 139 LVPF--HRYRAKKLP------RIRYHEGSAGGHLMI 166 (169)
Q Consensus 139 ~v~~--~~~~~~~~~------~~~~~~~~~~gH~~~ 166 (169)
++|+ .+.+.+.++ +++++.++++||.+.
T Consensus 199 ~v~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~H~~~ 234 (249)
T PRK10566 199 VVPAAESLRLQQALRERGLDKNLTCLWEPGVRHRIT 234 (249)
T ss_pred cCCHHHHHHHHHHHHhcCCCcceEEEecCCCCCccC
Confidence 9999 666666554 257888999999753
No 55
>PRK11071 esterase YqiA; Provisional
Probab=99.71 E-value=1.8e-16 Score=110.38 Aligned_cols=131 Identities=15% Similarity=0.093 Sum_probs=87.3
Q ss_pred CcEEEEeCCCCCCCCCCCCCCChhhHHHHHHHHHHhcCCCCceEEEEEcchHHHH-HHhhccccCCCcceEEEEeecchh
Q 044659 9 GVYVLTFDRTGYGESDPKPKRPVKIEAFDIQELANQLNLGHKFDVIGISILTYLF-GLVSNAHHTGIPAGVALVVLVINY 87 (169)
Q Consensus 9 g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~ia-~~~~~~~~~~~p~~~~~~~~~~~~ 87 (169)
+|+|+++|+|||| ++.++++.+++++++. ++++++||||||+++ .++. .+|..+++++|....
T Consensus 32 ~~~v~~~dl~g~~----------~~~~~~l~~l~~~~~~-~~~~lvG~S~Gg~~a~~~a~-----~~~~~~vl~~~~~~~ 95 (190)
T PRK11071 32 DIEMIVPQLPPYP----------ADAAELLESLVLEHGG-DPLGLVGSSLGGYYATWLSQ-----CFMLPAVVVNPAVRP 95 (190)
T ss_pred CCeEEeCCCCCCH----------HHHHHHHHHHHHHcCC-CCeEEEEECHHHHHHHHHHH-----HcCCCEEEECCCCCH
Confidence 7999999999985 3678889999999988 799999999999999 8888 777456777765542
Q ss_pred hh--hhhcccchh-----H--HHHHHHHHhcCCCCCchhhhccCCCCCCceEEEEeCCCCcchH--HHHHHHhCCCcEEE
Q 044659 88 CI--TCRLQGAHE-----S--LHRDIMVHLGTWEFDPMEMENQFPNNEESVYLCQGHKDKLVPF--HRYRAKKLPRIRYH 156 (169)
Q Consensus 88 ~~--~~~~~~~~~-----~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~g~~D~~v~~--~~~~~~~~~~~~~~ 156 (169)
.. ..+...... . +.++..... ...........+|+++++|++|++||+ +.++++ +++.+
T Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~-------~~~~~~~i~~~~~v~iihg~~De~V~~~~a~~~~~---~~~~~ 165 (190)
T PRK11071 96 FELLTDYLGENENPYTGQQYVLESRHIYDL-------KVMQIDPLESPDLIWLLQQTGDEVLDYRQAVAYYA---ACRQT 165 (190)
T ss_pred HHHHHHhcCCcccccCCCcEEEcHHHHHHH-------HhcCCccCCChhhEEEEEeCCCCcCCHHHHHHHHH---hcceE
Confidence 11 000000000 0 000000000 000111112566789999999999999 777776 35677
Q ss_pred EecCCCcee
Q 044659 157 EGSAGGHLM 165 (169)
Q Consensus 157 ~~~~~gH~~ 165 (169)
.++|++|.+
T Consensus 166 ~~~ggdH~f 174 (190)
T PRK11071 166 VEEGGNHAF 174 (190)
T ss_pred EECCCCcch
Confidence 889999976
No 56
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=99.71 E-value=2e-16 Score=111.99 Aligned_cols=155 Identities=17% Similarity=0.136 Sum_probs=88.5
Q ss_pred hhhhhcCcEEEEeCCCCCCCCCCC-----CCCC----hhhHHHHHHHHHHhcCC-CCceEEEEEcchHHHH-HHhhcccc
Q 044659 3 DFMDELGVYVLTFDRTGYGESDPK-----PKRP----VKIEAFDIQELANQLNL-GHKFDVIGISILTYLF-GLVSNAHH 71 (169)
Q Consensus 3 ~~l~~~g~~v~~~d~~G~G~s~~~-----~~~~----~~~~~~~~~~~~~~~~~-~~~~~l~G~S~Gg~ia-~~~~~~~~ 71 (169)
.+|+++||.|+.+|+||.+..... .... ++|..+-++.++++..+ .+++.++|+|+||.++ .++.
T Consensus 8 ~~la~~Gy~v~~~~~rGs~g~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~iD~~ri~i~G~S~GG~~a~~~~~---- 83 (213)
T PF00326_consen 8 QLLASQGYAVLVPNYRGSGGYGKDFHEAGRGDWGQADVDDVVAAIEYLIKQYYIDPDRIGIMGHSYGGYLALLAAT---- 83 (213)
T ss_dssp HHHHTTT-EEEEEE-TTSSSSHHHHHHTTTTGTTHHHHHHHHHHHHHHHHTTSEEEEEEEEEEETHHHHHHHHHHH----
T ss_pred HHHHhCCEEEEEEcCCCCCccchhHHHhhhccccccchhhHHHHHHHHhccccccceeEEEEcccccccccchhhc----
Confidence 568899999999999998854211 1111 44444444444444322 2789999999999999 7776
Q ss_pred CCCc---ceEEEEeecchhhhhhhcccchhHHHHHHHHHhc-CCCCCchhh-----hccCCC--CCCceEEEEeCCCCcc
Q 044659 72 TGIP---AGVALVVLVINYCITCRLQGAHESLHRDIMVHLG-TWEFDPMEM-----ENQFPN--NEESVYLCQGHKDKLV 140 (169)
Q Consensus 72 ~~~p---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-----~~~~~~--~~~P~l~~~g~~D~~v 140 (169)
..| +.++..++...... ....... +........+ .+. ..+.. ..+... +++|+|++||++|..|
T Consensus 84 -~~~~~f~a~v~~~g~~d~~~--~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~s~~~~~~~~~~~~P~li~hG~~D~~V 158 (213)
T PF00326_consen 84 -QHPDRFKAAVAGAGVSDLFS--YYGTTDI-YTKAEYLEYGDPWD-NPEFYRELSPISPADNVQIKPPVLIIHGENDPRV 158 (213)
T ss_dssp -HTCCGSSEEEEESE-SSTTC--SBHHTCC-HHHGHHHHHSSTTT-SHHHHHHHHHGGGGGGCGGGSEEEEEEETTBSSS
T ss_pred -ccceeeeeeeccceecchhc--ccccccc-cccccccccCccch-hhhhhhhhccccccccccCCCCEEEEccCCCCcc
Confidence 556 66777777655311 1100000 1111111111 111 11111 122333 7788999999999999
Q ss_pred hH--HH----HHHHhCCCcEEEEecCCCceee
Q 044659 141 PF--HR----YRAKKLPRIRYHEGSAGGHLMI 166 (169)
Q Consensus 141 ~~--~~----~~~~~~~~~~~~~~~~~gH~~~ 166 (169)
|+ +. .+.+.-.+.+++++|++||.+.
T Consensus 159 p~~~s~~~~~~L~~~g~~~~~~~~p~~gH~~~ 190 (213)
T PF00326_consen 159 PPSQSLRLYNALRKAGKPVELLIFPGEGHGFG 190 (213)
T ss_dssp TTHHHHHHHHHHHHTTSSEEEEEETT-SSSTT
T ss_pred CHHHHHHHHHHHHhcCCCEEEEEcCcCCCCCC
Confidence 98 33 4444444689999999999543
No 57
>PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A ....
Probab=99.71 E-value=2.8e-16 Score=104.40 Aligned_cols=121 Identities=26% Similarity=0.299 Sum_probs=83.5
Q ss_pred hhhhhhcCcEEEEeCCCCCCCCCCCCCCChhhHHHHHHHHHHhcCCCCceEEEEEcchHHHH-HHhhccccCCCc--ceE
Q 044659 2 QDFMDELGVYVLTFDRTGYGESDPKPKRPVKIEAFDIQELANQLNLGHKFDVIGISILTYLF-GLVSNAHHTGIP--AGV 78 (169)
Q Consensus 2 ~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~ia-~~~~~~~~~~~p--~~~ 78 (169)
.+.|.+.||.|+++|+|++|.+.... ..++..+++. .+..+. ++++++|||+||.++ .++. ..+ +++
T Consensus 19 ~~~l~~~G~~v~~~~~~~~~~~~~~~--~~~~~~~~~~--~~~~~~-~~i~l~G~S~Gg~~a~~~~~-----~~~~v~~~ 88 (145)
T PF12695_consen 19 AEALAEQGYAVVAFDYPGHGDSDGAD--AVERVLADIR--AGYPDP-DRIILIGHSMGGAIAANLAA-----RNPRVKAV 88 (145)
T ss_dssp HHHHHHTTEEEEEESCTTSTTSHHSH--HHHHHHHHHH--HHHCTC-CEEEEEEETHHHHHHHHHHH-----HSTTESEE
T ss_pred HHHHHHCCCEEEEEecCCCCccchhH--HHHHHHHHHH--hhcCCC-CcEEEEEEccCcHHHHHHhh-----hccceeEE
Confidence 35678889999999999999873111 1222222222 112345 799999999999999 6666 435 888
Q ss_pred EEEeecchhhhhhhcccchhHHHHHHHHHhcCCCCCchhhhccCCCCCCceEEEEeCCCCcchH--HHHHHHhCC-CcEE
Q 044659 79 ALVVLVINYCITCRLQGAHESLHRDIMVHLGTWEFDPMEMENQFPNNEESVYLCQGHKDKLVPF--HRYRAKKLP-RIRY 155 (169)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~g~~D~~v~~--~~~~~~~~~-~~~~ 155 (169)
+++++. + . ...+...++|+++++|++|..+++ .+.+.+.++ +.++
T Consensus 89 v~~~~~-~-----------------------------~--~~~~~~~~~pv~~i~g~~D~~~~~~~~~~~~~~~~~~~~~ 136 (145)
T PF12695_consen 89 VLLSPY-P-----------------------------D--SEDLAKIRIPVLFIHGENDPLVPPEQVRRLYEALPGPKEL 136 (145)
T ss_dssp EEESES-S-----------------------------G--CHHHTTTTSEEEEEEETT-SSSHHHHHHHHHHHHCSSEEE
T ss_pred EEecCc-c-----------------------------c--hhhhhccCCcEEEEEECCCCcCCHHHHHHHHHHcCCCcEE
Confidence 888871 0 0 011223344699999999999998 777777777 5899
Q ss_pred EEecCCCce
Q 044659 156 HEGSAGGHL 164 (169)
Q Consensus 156 ~~~~~~gH~ 164 (169)
+++++++|+
T Consensus 137 ~~i~g~~H~ 145 (145)
T PF12695_consen 137 YIIPGAGHF 145 (145)
T ss_dssp EEETTS-TT
T ss_pred EEeCCCcCc
Confidence 999999995
No 58
>PRK06765 homoserine O-acetyltransferase; Provisional
Probab=99.68 E-value=1.3e-15 Score=116.61 Aligned_cols=72 Identities=17% Similarity=0.092 Sum_probs=57.1
Q ss_pred hhcCcEEEEeCCCCCCCCCC----------------------CCCCChhhHHHHHHHHHHhcCCCCceE-EEEEcchHHH
Q 044659 6 DELGVYVLTFDRTGYGESDP----------------------KPKRPVKIEAFDIQELANQLNLGHKFD-VIGISILTYL 62 (169)
Q Consensus 6 ~~~g~~v~~~d~~G~G~s~~----------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~-l~G~S~Gg~i 62 (169)
.-..|.||++|..|-|.|.. .+..++++.++++.++++++++ +++. ++||||||++
T Consensus 96 Dt~~yfvi~~n~lG~~~~~~p~~g~tgp~s~~p~tg~~~~~~fP~~t~~d~~~~~~~ll~~lgi-~~~~~vvG~SmGG~i 174 (389)
T PRK06765 96 DTNKYFVISTDTLCNVQVKDPNVITTGPASINPKTGKPYGMDFPVVTILDFVRVQKELIKSLGI-ARLHAVMGPSMGGMQ 174 (389)
T ss_pred CCCceEEEEecccCCCcCCCCCCCCCCCCCCCcCCCCccCCCCCcCcHHHHHHHHHHHHHHcCC-CCceEEEEECHHHHH
Confidence 34469999999999764210 1123599999999999999999 7886 9999999999
Q ss_pred H-HHhhccccCCCc---ceEEEEee
Q 044659 63 F-GLVSNAHHTGIP---AGVALVVL 83 (169)
Q Consensus 63 a-~~~~~~~~~~~p---~~~~~~~~ 83 (169)
+ .++. .+| .++++++.
T Consensus 175 al~~a~-----~~P~~v~~lv~ia~ 194 (389)
T PRK06765 175 AQEWAV-----HYPHMVERMIGVIG 194 (389)
T ss_pred HHHHHH-----HChHhhheEEEEec
Confidence 9 8888 888 77777753
No 59
>TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit. This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates.
Probab=99.66 E-value=1.6e-15 Score=114.98 Aligned_cols=76 Identities=13% Similarity=0.033 Sum_probs=55.1
Q ss_pred hhhhhhcCcEEEEeCCCCCCCCCCCCCCChhhHHH-----HHHHHHHhcCCCCceEEEEEcchHHHH-HHhhccccCCCc
Q 044659 2 QDFMDELGVYVLTFDRTGYGESDPKPKRPVKIEAF-----DIQELANQLNLGHKFDVIGISILTYLF-GLVSNAHHTGIP 75 (169)
Q Consensus 2 ~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~l~G~S~Gg~ia-~~~~~~~~~~~p 75 (169)
.+.|.+.||+|+++|++|+|.++.. .++.++.. .++.+.+..+. ++++++||||||.++ .++. ..|
T Consensus 87 ~~~L~~~G~~V~~~D~~g~g~s~~~--~~~~d~~~~~~~~~v~~l~~~~~~-~~i~lvGhS~GG~i~~~~~~-----~~~ 158 (350)
T TIGR01836 87 VRGLLERGQDVYLIDWGYPDRADRY--LTLDDYINGYIDKCVDYICRTSKL-DQISLLGICQGGTFSLCYAA-----LYP 158 (350)
T ss_pred HHHHHHCCCeEEEEeCCCCCHHHhc--CCHHHHHHHHHHHHHHHHHHHhCC-CcccEEEECHHHHHHHHHHH-----hCc
Confidence 4567888999999999999977532 23445443 24445555666 799999999999999 8777 666
Q ss_pred ---ceEEEEeecc
Q 044659 76 ---AGVALVVLVI 85 (169)
Q Consensus 76 ---~~~~~~~~~~ 85 (169)
.+++++++..
T Consensus 159 ~~v~~lv~~~~p~ 171 (350)
T TIGR01836 159 DKIKNLVTMVTPV 171 (350)
T ss_pred hheeeEEEecccc
Confidence 5666666544
No 60
>COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=99.60 E-value=1.4e-14 Score=105.96 Aligned_cols=165 Identities=19% Similarity=0.160 Sum_probs=97.1
Q ss_pred hhhhhhcCcEEEEeCCCCCCCCCCCCCC-ChhhHHHHHHHHHHhc---CCCCceEEEEEcchH-HHH-HHhhccccCCCc
Q 044659 2 QDFMDELGVYVLTFDRTGYGESDPKPKR-PVKIEAFDIQELANQL---NLGHKFDVIGISILT-YLF-GLVSNAHHTGIP 75 (169)
Q Consensus 2 ~~~l~~~g~~v~~~d~~G~G~s~~~~~~-~~~~~~~~~~~~~~~~---~~~~~~~l~G~S~Gg-~ia-~~~~~~~~~~~p 75 (169)
.+.+.++||.++++++|||+.+...... -...+.+|+.++++.+ ....++..+|+|+|| +++ .... +-+..|
T Consensus 97 ~~~~~~rg~~~Vv~~~Rgcs~~~n~~p~~yh~G~t~D~~~~l~~l~~~~~~r~~~avG~SLGgnmLa~ylge--eg~d~~ 174 (345)
T COG0429 97 MRALSRRGWLVVVFHFRGCSGEANTSPRLYHSGETEDIRFFLDWLKARFPPRPLYAVGFSLGGNMLANYLGE--EGDDLP 174 (345)
T ss_pred HHHHHhcCCeEEEEecccccCCcccCcceecccchhHHHHHHHHHHHhCCCCceEEEEecccHHHHHHHHHh--hccCcc
Confidence 4567889999999999999987532211 1333446666666554 223789999999999 777 5555 222334
Q ss_pred --ceEEEEeecchhh-hhhhcccc---------hhHHHHH-------------------HHHHhcCCCCCch--------
Q 044659 76 --AGVALVVLVINYC-ITCRLQGA---------HESLHRD-------------------IMVHLGTWEFDPM-------- 116 (169)
Q Consensus 76 --~~~~~~~~~~~~~-~~~~~~~~---------~~~~~~~-------------------~~~~~~~~~~~~~-------- 116 (169)
.++++.+|..-.. ...+.++. ...+.+. +......|.|+..
T Consensus 175 ~~aa~~vs~P~Dl~~~~~~l~~~~s~~ly~r~l~~~L~~~~~~kl~~l~~~~p~~~~~~ik~~~ti~eFD~~~Tap~~Gf 254 (345)
T COG0429 175 LDAAVAVSAPFDLEACAYRLDSGFSLRLYSRYLLRNLKRNAARKLKELEPSLPGTVLAAIKRCRTIREFDDLLTAPLHGF 254 (345)
T ss_pred cceeeeeeCHHHHHHHHHHhcCchhhhhhHHHHHHHHHHHHHHHHHhcCcccCcHHHHHHHhhchHHhccceeeecccCC
Confidence 4444444432110 00010000 0001110 0001112333211
Q ss_pred ----hh------hccCCCCCCceEEEEeCCCCcchH--HHHHHH-hCCCcEEEEecCCCceeeec
Q 044659 117 ----EM------ENQFPNNEESVYLCQGHKDKLVPF--HRYRAK-KLPRIRYHEGSAGGHLMIHE 168 (169)
Q Consensus 117 ----~~------~~~~~~~~~P~l~~~g~~D~~v~~--~~~~~~-~~~~~~~~~~~~~gH~~~~e 168 (169)
+. .+.+++|++|++|+++.+|+++++ ...... ..|++.+..-+.+||+.++.
T Consensus 255 ~da~dYYr~aSs~~~L~~Ir~PtLii~A~DDP~~~~~~iP~~~~~~np~v~l~~t~~GGHvGfl~ 319 (345)
T COG0429 255 ADAEDYYRQASSLPLLPKIRKPTLIINAKDDPFMPPEVIPKLQEMLNPNVLLQLTEHGGHVGFLG 319 (345)
T ss_pred CcHHHHHHhccccccccccccceEEEecCCCCCCChhhCCcchhcCCCceEEEeecCCceEEecc
Confidence 00 112677999999999999999999 444444 77889999999999998875
No 61
>KOG4667 consensus Predicted esterase [Lipid transport and metabolism]
Probab=99.60 E-value=1.8e-14 Score=99.28 Aligned_cols=155 Identities=16% Similarity=0.103 Sum_probs=107.6
Q ss_pred hhhhhhcCcEEEEeCCCCCCCCCCCCCC-ChhhHHHHHHHHHHhcCCCCc--eEEEEEcchHHHH-HHhhccccCCCc--
Q 044659 2 QDFMDELGVYVLTFDRTGYGESDPKPKR-PVKIEAFDIQELANQLNLGHK--FDVIGISILTYLF-GLVSNAHHTGIP-- 75 (169)
Q Consensus 2 ~~~l~~~g~~v~~~d~~G~G~s~~~~~~-~~~~~~~~~~~~~~~~~~~~~--~~l~G~S~Gg~ia-~~~~~~~~~~~p-- 75 (169)
+..+++.|+.++.+|.+|.|+|...-.. .....++|+..+++.+.-..+ .+++|||-||-++ .++. ++.
T Consensus 55 A~~~e~~gis~fRfDF~GnGeS~gsf~~Gn~~~eadDL~sV~q~~s~~nr~v~vi~gHSkGg~Vvl~ya~-----K~~d~ 129 (269)
T KOG4667|consen 55 AKALEKEGISAFRFDFSGNGESEGSFYYGNYNTEADDLHSVIQYFSNSNRVVPVILGHSKGGDVVLLYAS-----KYHDI 129 (269)
T ss_pred HHHHHhcCceEEEEEecCCCCcCCccccCcccchHHHHHHHHHHhccCceEEEEEEeecCccHHHHHHHH-----hhcCc
Confidence 4567888999999999999999887655 477778999999988753133 4699999999999 8888 766
Q ss_pred ceEEEEeecchhhh---hhhcccchhHHHHHHHHHhcCCCC-----------Cchhh----------hccCCCCCCceEE
Q 044659 76 AGVALVVLVINYCI---TCRLQGAHESLHRDIMVHLGTWEF-----------DPMEM----------ENQFPNNEESVYL 131 (169)
Q Consensus 76 ~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~----------~~~~~~~~~P~l~ 131 (169)
.-++.+++-..... ++..+...+ +. ...+.|.. .++.+ .++.-+.+||+|-
T Consensus 130 ~~viNcsGRydl~~~I~eRlg~~~l~-~i----ke~Gfid~~~rkG~y~~rvt~eSlmdrLntd~h~aclkId~~C~VLT 204 (269)
T KOG4667|consen 130 RNVINCSGRYDLKNGINERLGEDYLE-RI----KEQGFIDVGPRKGKYGYRVTEESLMDRLNTDIHEACLKIDKQCRVLT 204 (269)
T ss_pred hheEEcccccchhcchhhhhcccHHH-HH----HhCCceecCcccCCcCceecHHHHHHHHhchhhhhhcCcCccCceEE
Confidence 34555554332211 111111111 11 11111111 11111 2334558899999
Q ss_pred EEeCCCCcchH--HHHHHHhCCCcEEEEecCCCceee
Q 044659 132 CQGHKDKLVPF--HRYRAKKLPRIRYHEGSAGGHLMI 166 (169)
Q Consensus 132 ~~g~~D~~v~~--~~~~~~~~~~~~~~~~~~~gH~~~ 166 (169)
+||..|.+||. +..+++..|+-++..+||+.|...
T Consensus 205 vhGs~D~IVPve~AkefAk~i~nH~L~iIEgADHnyt 241 (269)
T KOG4667|consen 205 VHGSEDEIVPVEDAKEFAKIIPNHKLEIIEGADHNYT 241 (269)
T ss_pred EeccCCceeechhHHHHHHhccCCceEEecCCCcCcc
Confidence 99999999999 999999999999999999999754
No 62
>KOG2382 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.57 E-value=1e-13 Score=101.36 Aligned_cols=156 Identities=19% Similarity=0.224 Sum_probs=102.2
Q ss_pred hcCcEEEEeCCCCCCCCCCCCCCChhhHHHHHHHHHHhcC----CCCceEEEEEcchH-HHH-HHhhccccCCCc---ce
Q 044659 7 ELGVYVLTFDRTGYGESDPKPKRPVKIEAFDIQELANQLN----LGHKFDVIGISILT-YLF-GLVSNAHHTGIP---AG 77 (169)
Q Consensus 7 ~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~l~G~S~Gg-~ia-~~~~~~~~~~~p---~~ 77 (169)
+.+..+++.|.|.||.|......+....++|+..+++..+ . .+++++|||||| .++ ..+. ..| ..
T Consensus 78 ~l~~~v~~vd~RnHG~Sp~~~~h~~~~ma~dv~~Fi~~v~~~~~~-~~~~l~GHsmGG~~~~m~~t~-----~~p~~~~r 151 (315)
T KOG2382|consen 78 KLGRDVYAVDVRNHGSSPKITVHNYEAMAEDVKLFIDGVGGSTRL-DPVVLLGHSMGGVKVAMAETL-----KKPDLIER 151 (315)
T ss_pred cccCceEEEecccCCCCccccccCHHHHHHHHHHHHHHccccccc-CCceecccCcchHHHHHHHHH-----hcCcccce
Confidence 4577999999999999987777779999999999999874 3 689999999999 444 4444 445 22
Q ss_pred EEEE--eec-chhh-h------hhh-----c----ccchhHHHHHH------------HH-Hhc--------CCCCCchh
Q 044659 78 VALV--VLV-INYC-I------TCR-----L----QGAHESLHRDI------------MV-HLG--------TWEFDPME 117 (169)
Q Consensus 78 ~~~~--~~~-~~~~-~------~~~-----~----~~~~~~~~~~~------------~~-~~~--------~~~~~~~~ 117 (169)
++++ +|. .+.. . ..+ . .+..+ ..+.. .. .+. .|..++..
T Consensus 152 liv~D~sP~~~~~~~~e~~e~i~~m~~~d~~~~~~~~rke-~~~~l~~~~~d~~~~~fi~~nl~~~~~~~s~~w~~nl~~ 230 (315)
T KOG2382|consen 152 LIVEDISPGGVGRSYGEYRELIKAMIQLDLSIGVSRGRKE-ALKSLIEVGFDNLVRQFILTNLKKSPSDGSFLWRVNLDS 230 (315)
T ss_pred eEEEecCCccCCcccchHHHHHHHHHhccccccccccHHH-HHHHHHHHhcchHHHHHHHHhcCcCCCCCceEEEeCHHH
Confidence 2222 331 1110 0 000 0 11000 00000 00 000 23333222
Q ss_pred hh------------ccC--CCCCCceEEEEeCCCCcchH--HHHHHHhCCCcEEEEecCCCceeeecC
Q 044659 118 ME------------NQF--PNNEESVYLCQGHKDKLVPF--HRYRAKKLPRIRYHEGSAGGHLMIHEK 169 (169)
Q Consensus 118 ~~------------~~~--~~~~~P~l~~~g~~D~~v~~--~~~~~~~~~~~~~~~~~~~gH~~~~e~ 169 (169)
+. ..+ ...+.||+++.|.++.+++. -..+.+.+|++++++++++||++++|+
T Consensus 231 i~~~~~~~~~~s~~~~l~~~~~~~pvlfi~g~~S~fv~~~~~~~~~~~fp~~e~~~ld~aGHwVh~E~ 298 (315)
T KOG2382|consen 231 IASLLDEYEILSYWADLEDGPYTGPVLFIKGLQSKFVPDEHYPRMEKIFPNVEVHELDEAGHWVHLEK 298 (315)
T ss_pred HHHHHHHHHhhcccccccccccccceeEEecCCCCCcChhHHHHHHHhccchheeecccCCceeecCC
Confidence 11 011 45788999999999999999 788888999999999999999999986
No 63
>COG3208 GrsT Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.56 E-value=5.1e-14 Score=99.14 Aligned_cols=158 Identities=13% Similarity=0.071 Sum_probs=97.2
Q ss_pred CcEEEEeCCCCCCCCCCCC-CCChhhHHHHHHHHHHh-cCCCCceEEEEEcchHHHH-HHhhccccCCCc-ceEEEEeec
Q 044659 9 GVYVLTFDRTGYGESDPKP-KRPVKIEAFDIQELANQ-LNLGHKFDVIGISILTYLF-GLVSNAHHTGIP-AGVALVVLV 84 (169)
Q Consensus 9 g~~v~~~d~~G~G~s~~~~-~~~~~~~~~~~~~~~~~-~~~~~~~~l~G~S~Gg~ia-~~~~~~~~~~~p-~~~~~~~~~ 84 (169)
.+.+++.++||+|..-..+ ..+++..++.+...+.. ... +++.++||||||++| ..+...+....+ ..+.+.+..
T Consensus 33 ~iel~avqlPGR~~r~~ep~~~di~~Lad~la~el~~~~~d-~P~alfGHSmGa~lAfEvArrl~~~g~~p~~lfisg~~ 111 (244)
T COG3208 33 DIELLAVQLPGRGDRFGEPLLTDIESLADELANELLPPLLD-APFALFGHSMGAMLAFEVARRLERAGLPPRALFISGCR 111 (244)
T ss_pred hhheeeecCCCcccccCCcccccHHHHHHHHHHHhccccCC-CCeeecccchhHHHHHHHHHHHHHcCCCcceEEEecCC
Confidence 3789999999999875444 44588888888877773 333 789999999999999 888744444444 444444333
Q ss_pred chhhh--hhhcccchhHHHHHHHHHhc-----------------CCCCCch---hh-hccCCCCCCceEEEEeCCCCcch
Q 044659 85 INYCI--TCRLQGAHESLHRDIMVHLG-----------------TWEFDPM---EM-ENQFPNNEESVYLCQGHKDKLVP 141 (169)
Q Consensus 85 ~~~~~--~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~---~~-~~~~~~~~~P~l~~~g~~D~~v~ 141 (169)
.|... ..+.......+..++....+ ..+.+.. .. ..+...++||+..+.|++|..+.
T Consensus 112 aP~~~~~~~i~~~~D~~~l~~l~~lgG~p~e~led~El~~l~LPilRAD~~~~e~Y~~~~~~pl~~pi~~~~G~~D~~vs 191 (244)
T COG3208 112 APHYDRGKQIHHLDDADFLADLVDLGGTPPELLEDPELMALFLPILRADFRALESYRYPPPAPLACPIHAFGGEKDHEVS 191 (244)
T ss_pred CCCCcccCCccCCCHHHHHHHHHHhCCCChHHhcCHHHHHHHHHHHHHHHHHhcccccCCCCCcCcceEEeccCcchhcc
Confidence 33110 11111111112222211100 0000000 00 12235688999999999999999
Q ss_pred H--HHHHHHhCC-CcEEEEecCCCceeeec
Q 044659 142 F--HRYRAKKLP-RIRYHEGSAGGHLMIHE 168 (169)
Q Consensus 142 ~--~~~~~~~~~-~~~~~~~~~~gH~~~~e 168 (169)
. ...+.++.. ..+++.++| |||...+
T Consensus 192 ~~~~~~W~~~t~~~f~l~~fdG-gHFfl~~ 220 (244)
T COG3208 192 RDELGAWREHTKGDFTLRVFDG-GHFFLNQ 220 (244)
T ss_pred HHHHHHHHHhhcCCceEEEecC-cceehhh
Confidence 9 555666555 799999998 9998754
No 64
>KOG4391 consensus Predicted alpha/beta hydrolase BEM46 [General function prediction only]
Probab=99.52 E-value=7.9e-14 Score=96.39 Aligned_cols=151 Identities=20% Similarity=0.165 Sum_probs=92.6
Q ss_pred hhhcCcEEEEeCCCCCCCCCCCCCCC--hhhHHHHHHHHHHhcCCC-CceEEEEEcchHHHH-HHhhccccCCCc--ceE
Q 044659 5 MDELGVYVLTFDRTGYGESDPKPKRP--VKIEAFDIQELANQLNLG-HKFDVIGISILTYLF-GLVSNAHHTGIP--AGV 78 (169)
Q Consensus 5 l~~~g~~v~~~d~~G~G~s~~~~~~~--~~~~~~~~~~~~~~~~~~-~~~~l~G~S~Gg~ia-~~~~~~~~~~~p--~~~ 78 (169)
..+.+.+|+.+++||||.|++.+... .-|....++.+.++-..+ .+++++|-|.||.+| ..++ ... ...
T Consensus 102 y~~l~mnv~ivsYRGYG~S~GspsE~GL~lDs~avldyl~t~~~~dktkivlfGrSlGGAvai~las-----k~~~ri~~ 176 (300)
T KOG4391|consen 102 YVNLKMNVLIVSYRGYGKSEGSPSEEGLKLDSEAVLDYLMTRPDLDKTKIVLFGRSLGGAVAIHLAS-----KNSDRISA 176 (300)
T ss_pred HHHcCceEEEEEeeccccCCCCccccceeccHHHHHHHHhcCccCCcceEEEEecccCCeeEEEeec-----cchhheee
Confidence 35678999999999999998876542 222333344555544332 679999999999999 6665 333 333
Q ss_pred EEE-eecchhhhhhhcccchhHHHHHH--HHHhcCCCCCchhhhccCCCCCCceEEEEeCCCCcchH--HHHHHHhCC--
Q 044659 79 ALV-VLVINYCITCRLQGAHESLHRDI--MVHLGTWEFDPMEMENQFPNNEESVYLCQGHKDKLVPF--HRYRAKKLP-- 151 (169)
Q Consensus 79 ~~~-~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~P~l~~~g~~D~~v~~--~~~~~~~~~-- 151 (169)
+++ ..+.+.. .........-..+-. ......|... . .....+.|.|++.|.+|.+||+ .+.+++..|
T Consensus 177 ~ivENTF~SIp-~~~i~~v~p~~~k~i~~lc~kn~~~S~-~----ki~~~~~P~LFiSGlkDelVPP~~Mr~Ly~~c~S~ 250 (300)
T KOG4391|consen 177 IIVENTFLSIP-HMAIPLVFPFPMKYIPLLCYKNKWLSY-R----KIGQCRMPFLFISGLKDELVPPVMMRQLYELCPSR 250 (300)
T ss_pred eeeechhccch-hhhhheeccchhhHHHHHHHHhhhcch-h----hhccccCceEEeecCccccCCcHHHHHHHHhCchh
Confidence 333 2222210 111111111000000 0111233211 1 1335778899999999999999 899999988
Q ss_pred CcEEEEecCCCceee
Q 044659 152 RIRYHEGSAGGHLMI 166 (169)
Q Consensus 152 ~~~~~~~~~~gH~~~ 166 (169)
+.++.++|++.|.-.
T Consensus 251 ~Krl~eFP~gtHNDT 265 (300)
T KOG4391|consen 251 TKRLAEFPDGTHNDT 265 (300)
T ss_pred hhhheeCCCCccCce
Confidence 478999999999743
No 65
>TIGR03101 hydr2_PEP hydrolase, ortholog 2, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 1, TIGR03100) of the same superfamily.
Probab=99.49 E-value=1.7e-13 Score=99.82 Aligned_cols=79 Identities=15% Similarity=0.088 Sum_probs=61.7
Q ss_pred hhhhhcCcEEEEeCCCCCCCCCCCCC-CChhhHHHHHHHHH---HhcCCCCceEEEEEcchHHHH-HHhhccccCCCc--
Q 044659 3 DFMDELGVYVLTFDRTGYGESDPKPK-RPVKIEAFDIQELA---NQLNLGHKFDVIGISILTYLF-GLVSNAHHTGIP-- 75 (169)
Q Consensus 3 ~~l~~~g~~v~~~d~~G~G~s~~~~~-~~~~~~~~~~~~~~---~~~~~~~~~~l~G~S~Gg~ia-~~~~~~~~~~~p-- 75 (169)
+.|.+.||+|+++|+||||.|..... .++..+.+|+..++ ++.+. ++++++||||||.++ .++. .+|
T Consensus 50 ~~La~~Gy~Vl~~Dl~G~G~S~g~~~~~~~~~~~~Dv~~ai~~L~~~~~-~~v~LvG~SmGG~vAl~~A~-----~~p~~ 123 (266)
T TIGR03101 50 RAFAAGGFGVLQIDLYGCGDSAGDFAAARWDVWKEDVAAAYRWLIEQGH-PPVTLWGLRLGALLALDAAN-----PLAAK 123 (266)
T ss_pred HHHHHCCCEEEEECCCCCCCCCCccccCCHHHHHHHHHHHHHHHHhcCC-CCEEEEEECHHHHHHHHHHH-----hCccc
Confidence 45677899999999999999975432 35777888876644 44555 789999999999999 7877 665
Q ss_pred -ceEEEEeecchh
Q 044659 76 -AGVALVVLVINY 87 (169)
Q Consensus 76 -~~~~~~~~~~~~ 87 (169)
.++++++|+.+.
T Consensus 124 v~~lVL~~P~~~g 136 (266)
T TIGR03101 124 CNRLVLWQPVVSG 136 (266)
T ss_pred cceEEEeccccch
Confidence 678888887653
No 66
>TIGR02821 fghA_ester_D S-formylglutathione hydrolase. This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well.
Probab=99.49 E-value=1e-12 Score=96.61 Aligned_cols=154 Identities=12% Similarity=0.124 Sum_probs=86.8
Q ss_pred hhhhhcCcEEEEeCC--CCCCCCCCC------------------C---CCC-hhhHHHHHHHHHHh---cCCCCceEEEE
Q 044659 3 DFMDELGVYVLTFDR--TGYGESDPK------------------P---KRP-VKIEAFDIQELANQ---LNLGHKFDVIG 55 (169)
Q Consensus 3 ~~l~~~g~~v~~~d~--~G~G~s~~~------------------~---~~~-~~~~~~~~~~~~~~---~~~~~~~~l~G 55 (169)
.++.+.||.|++||. +|+|.+... + ... .....+++..++++ ++. +++.++|
T Consensus 66 ~la~~~g~~Vv~Pd~~~~g~~~~~~~~~w~~g~~~~~~~d~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~-~~~~~~G 144 (275)
T TIGR02821 66 RFAAEHGLALVAPDTSPRGTGIAGEDDAWDFGKGAGFYVDATEEPWSQHYRMYSYIVQELPALVAAQFPLDG-ERQGITG 144 (275)
T ss_pred HHHhhcCcEEEEeCCCCCcCCCCCCcccccccCCccccccCCcCcccccchHHHHHHHHHHHHHHhhCCCCC-CceEEEE
Confidence 344567999999998 555432200 0 011 22335667777766 234 6899999
Q ss_pred EcchHHHH-HHhhccccCCCc---ceEEEEeecchhhhhhhcccchhHHHHHHHHH-hcCCC-CCchhhhccCCCCCCce
Q 044659 56 ISILTYLF-GLVSNAHHTGIP---AGVALVVLVINYCITCRLQGAHESLHRDIMVH-LGTWE-FDPMEMENQFPNNEESV 129 (169)
Q Consensus 56 ~S~Gg~ia-~~~~~~~~~~~p---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~P~ 129 (169)
|||||.++ .++. .+| .+++.+++..... . .. ............ ...|. .++..+.. ......|+
T Consensus 145 ~S~GG~~a~~~a~-----~~p~~~~~~~~~~~~~~~~--~-~~-~~~~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~pl 214 (275)
T TIGR02821 145 HSMGGHGALVIAL-----KNPDRFKSVSAFAPIVAPS--R-CP-WGQKAFSAYLGADEAAWRSYDASLLVA-DGGRHSTI 214 (275)
T ss_pred EChhHHHHHHHHH-----hCcccceEEEEECCccCcc--c-Cc-chHHHHHHHhcccccchhhcchHHHHh-hcccCCCe
Confidence 99999999 8888 777 6666666654421 0 00 000000000000 00111 11111111 11245689
Q ss_pred EEEEeCCCCcchH-------HHHHHHhCCCcEEEEecCCCceeee
Q 044659 130 YLCQGHKDKLVPF-------HRYRAKKLPRIRYHEGSAGGHLMIH 167 (169)
Q Consensus 130 l~~~g~~D~~v~~-------~~~~~~~~~~~~~~~~~~~gH~~~~ 167 (169)
++.+|+.|+.++. .+.+.+.-...++.++||.+|.+.+
T Consensus 215 li~~G~~D~~v~~~~~~~~~~~~l~~~g~~v~~~~~~g~~H~f~~ 259 (275)
T TIGR02821 215 LIDQGTADQFLDEQLRPDAFEQACRAAGQALTLRRQAGYDHSYYF 259 (275)
T ss_pred eEeecCCCcccCccccHHHHHHHHHHcCCCeEEEEeCCCCccchh
Confidence 9999999999885 2333333335789999999998753
No 67
>PLN02872 triacylglycerol lipase
Probab=99.49 E-value=1.8e-13 Score=104.94 Aligned_cols=63 Identities=17% Similarity=0.135 Sum_probs=48.2
Q ss_pred hhhhcCcEEEEeCCCCCCCCCC-------CC---CCChhhHH-HHHHHHHHhc---CCCCceEEEEEcchHHHH-HHhh
Q 044659 4 FMDELGVYVLTFDRTGYGESDP-------KP---KRPVKIEA-FDIQELANQL---NLGHKFDVIGISILTYLF-GLVS 67 (169)
Q Consensus 4 ~l~~~g~~v~~~d~~G~G~s~~-------~~---~~~~~~~~-~~~~~~~~~~---~~~~~~~l~G~S~Gg~ia-~~~~ 67 (169)
.|++.||+|+++|+||++.|.. .. ..++.+.+ .|+.++++++ .. ++++++||||||.++ .++.
T Consensus 102 ~La~~GydV~l~n~RG~~~s~gh~~~~~~~~~fw~~s~~e~a~~Dl~a~id~i~~~~~-~~v~~VGhS~Gg~~~~~~~~ 179 (395)
T PLN02872 102 ILADHGFDVWVGNVRGTRWSYGHVTLSEKDKEFWDWSWQELALYDLAEMIHYVYSITN-SKIFIVGHSQGTIMSLAALT 179 (395)
T ss_pred HHHhCCCCcccccccccccccCCCCCCccchhccCCcHHHHHHHHHHHHHHHHHhccC-CceEEEEECHHHHHHHHHhh
Confidence 4778899999999999886532 11 12466677 6888888876 33 689999999999999 6555
No 68
>KOG1838 consensus Alpha/beta hydrolase [General function prediction only]
Probab=99.48 E-value=1.4e-12 Score=98.45 Aligned_cols=165 Identities=19% Similarity=0.180 Sum_probs=101.2
Q ss_pred hhhhhcCcEEEEeCCCCCCCCCCCCCCC-hhhHHHHHHHHHHhcC----CCCceEEEEEcchHHHH-HHhhccccCCCc-
Q 044659 3 DFMDELGVYVLTFDRTGYGESDPKPKRP-VKIEAFDIQELANQLN----LGHKFDVIGISILTYLF-GLVSNAHHTGIP- 75 (169)
Q Consensus 3 ~~l~~~g~~v~~~d~~G~G~s~~~~~~~-~~~~~~~~~~~~~~~~----~~~~~~l~G~S~Gg~ia-~~~~~~~~~~~p- 75 (169)
..++++||+|+.+..||+|++.-..... -..+.+|++++++++. . .++..+|+||||.+. .++.... +.-|
T Consensus 148 ~~a~~~G~r~VVfN~RG~~g~~LtTpr~f~ag~t~Dl~~~v~~i~~~~P~-a~l~avG~S~Gg~iL~nYLGE~g-~~~~l 225 (409)
T KOG1838|consen 148 HEAQRKGYRVVVFNHRGLGGSKLTTPRLFTAGWTEDLREVVNHIKKRYPQ-APLFAVGFSMGGNILTNYLGEEG-DNTPL 225 (409)
T ss_pred HHHHhCCcEEEEECCCCCCCCccCCCceeecCCHHHHHHHHHHHHHhCCC-CceEEEEecchHHHHHHHhhhcc-CCCCc
Confidence 4567889999999999999886443332 4456666666666654 4 689999999999999 7776211 1224
Q ss_pred -ceEEEEeecchhh--h------------hhhcccchhHHHH----------------------HHHHHhc--CCCCC-c
Q 044659 76 -AGVALVVLVINYC--I------------TCRLQGAHESLHR----------------------DIMVHLG--TWEFD-P 115 (169)
Q Consensus 76 -~~~~~~~~~~~~~--~------------~~~~~~~~~~~~~----------------------~~~~~~~--~~~~~-~ 115 (169)
.++.+.+|..... + ..+.......+.+ +....+. .+++. .
T Consensus 226 ~~a~~v~~Pwd~~~~~~~~~~~~~~~~y~~~l~~~l~~~~~~~r~~~~~~~vd~d~~~~~~SvreFD~~~t~~~~gf~~~ 305 (409)
T KOG1838|consen 226 IAAVAVCNPWDLLAASRSIETPLYRRFYNRALTLNLKRIVLRHRHTLFEDPVDFDVILKSRSVREFDEALTRPMFGFKSV 305 (409)
T ss_pred eeEEEEeccchhhhhhhHHhcccchHHHHHHHHHhHHHHHhhhhhhhhhccchhhhhhhcCcHHHHHhhhhhhhcCCCcH
Confidence 5555556655320 0 0000000000000 0000000 01111 0
Q ss_pred hh------hhccCCCCCCceEEEEeCCCCcchH---HHHHHHhCCCcEEEEecCCCceeeecC
Q 044659 116 ME------MENQFPNNEESVYLCQGHKDKLVPF---HRYRAKKLPRIRYHEGSAGGHLMIHEK 169 (169)
Q Consensus 116 ~~------~~~~~~~~~~P~l~~~g~~D~~v~~---~~~~~~~~~~~~~~~~~~~gH~~~~e~ 169 (169)
++ -.....++++|++++++.+|+++|. -.......|+.-+.+-..+||..++|.
T Consensus 306 deYY~~aSs~~~v~~I~VP~L~ina~DDPv~p~~~ip~~~~~~np~v~l~~T~~GGHlgfleg 368 (409)
T KOG1838|consen 306 DEYYKKASSSNYVDKIKVPLLCINAADDPVVPEEAIPIDDIKSNPNVLLVITSHGGHLGFLEG 368 (409)
T ss_pred HHHHhhcchhhhcccccccEEEEecCCCCCCCcccCCHHHHhcCCcEEEEEeCCCceeeeecc
Confidence 00 0122567999999999999999999 566777778888888888899999874
No 69
>COG2945 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=99.48 E-value=3.5e-13 Score=91.46 Aligned_cols=132 Identities=15% Similarity=0.162 Sum_probs=85.7
Q ss_pred hhhhhhcCcEEEEeCCCCCCCCCCCCCCC---hhhHHHHHHHHHHhcCCCCceEEEEEcchHHHH-HHhhccccCCCcce
Q 044659 2 QDFMDELGVYVLTFDRTGYGESDPKPKRP---VKIEAFDIQELANQLNLGHKFDVIGISILTYLF-GLVSNAHHTGIPAG 77 (169)
Q Consensus 2 ~~~l~~~g~~v~~~d~~G~G~s~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~ia-~~~~~~~~~~~p~~ 77 (169)
+..|.++||.++.||+||.|+|...-... .+|...-+..+..+-.....+.+.|+|+|++|+ .++. +.|..
T Consensus 53 a~~l~~~G~atlRfNfRgVG~S~G~fD~GiGE~~Da~aaldW~~~~hp~s~~~~l~GfSFGa~Ia~~la~-----r~~e~ 127 (210)
T COG2945 53 ARALVKRGFATLRFNFRGVGRSQGEFDNGIGELEDAAAALDWLQARHPDSASCWLAGFSFGAYIAMQLAM-----RRPEI 127 (210)
T ss_pred HHHHHhCCceEEeecccccccccCcccCCcchHHHHHHHHHHHHhhCCCchhhhhcccchHHHHHHHHHH-----hcccc
Confidence 45688999999999999999998765554 444444444443333331334789999999999 8888 77633
Q ss_pred EEEEeecchhhhhhhcccchhHHHHHHHHHhcCCCCCchhhhccCCCCCCceEEEEeCCCCcchH--HHHHHHhCCCcEE
Q 044659 78 VALVVLVINYCITCRLQGAHESLHRDIMVHLGTWEFDPMEMENQFPNNEESVYLCQGHKDKLVPF--HRYRAKKLPRIRY 155 (169)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~g~~D~~v~~--~~~~~~~~~~~~~ 155 (169)
.+.++...+. . .|+|. -+..+.+|.++++|+.|.+++. .-+..+. ...++
T Consensus 128 ~~~is~~p~~--------~-------------~~dfs------~l~P~P~~~lvi~g~~Ddvv~l~~~l~~~~~-~~~~~ 179 (210)
T COG2945 128 LVFISILPPI--------N-------------AYDFS------FLAPCPSPGLVIQGDADDVVDLVAVLKWQES-IKITV 179 (210)
T ss_pred cceeeccCCC--------C-------------chhhh------hccCCCCCceeEecChhhhhcHHHHHHhhcC-CCCce
Confidence 3333321111 0 01110 0112334599999999999988 3333333 46789
Q ss_pred EEecCCCceee
Q 044659 156 HEGSAGGHLMI 166 (169)
Q Consensus 156 ~~~~~~gH~~~ 166 (169)
+.+++++||++
T Consensus 180 i~i~~a~HFF~ 190 (210)
T COG2945 180 ITIPGADHFFH 190 (210)
T ss_pred EEecCCCceec
Confidence 99999999986
No 70
>COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.48 E-value=1.1e-12 Score=93.32 Aligned_cols=153 Identities=22% Similarity=0.187 Sum_probs=98.0
Q ss_pred cEEEEeCCCCCCCCCCCCCCChhhHHHHHHHHHHhcCCCCceEEEEEcchHHHH-HHhhccccCCCc---ceEEEEeecc
Q 044659 10 VYVLTFDRTGYGESDPKPKRPVKIEAFDIQELANQLNLGHKFDVIGISILTYLF-GLVSNAHHTGIP---AGVALVVLVI 85 (169)
Q Consensus 10 ~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~ia-~~~~~~~~~~~p---~~~~~~~~~~ 85 (169)
|+++++|+||||.|. .........++++..++++++. .++.++||||||.++ .++. ..| .+++++++..
T Consensus 51 ~~~~~~d~~g~g~s~-~~~~~~~~~~~~~~~~~~~~~~-~~~~l~G~S~Gg~~~~~~~~-----~~p~~~~~~v~~~~~~ 123 (282)
T COG0596 51 YRVIAPDLRGHGRSD-PAGYSLSAYADDLAALLDALGL-EKVVLVGHSMGGAVALALAL-----RHPDRVRGLVLIGPAP 123 (282)
T ss_pred eEEEEecccCCCCCC-cccccHHHHHHHHHHHHHHhCC-CceEEEEecccHHHHHHHHH-----hcchhhheeeEecCCC
Confidence 999999999999997 1112344558999999999998 679999999999999 8888 777 6677776443
Q ss_pred h-----------hhh------hhhcccc--------------hhHHHH----------------HHH----HHhc-CCCC
Q 044659 86 N-----------YCI------TCRLQGA--------------HESLHR----------------DIM----VHLG-TWEF 113 (169)
Q Consensus 86 ~-----------~~~------~~~~~~~--------------~~~~~~----------------~~~----~~~~-~~~~ 113 (169)
. ... ....... ...... ... .... ....
T Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (282)
T COG0596 124 PPGLLEAALRQPAGAAPLAALADLLLGLDAAAFAALLAALGLLAALAAAARAGLAEALRAPLLGAAAAAFARAARADLAA 203 (282)
T ss_pred CcccccCccccCccccchhhhhhhhhccchhhhhhhhhcccccccccccchhccccccccccchhHhhhhhhhcccccch
Confidence 2 000 0000000 000000 000 0000 0000
Q ss_pred -C---ch-hhhccCCCCCCceEEEEeCCCCcchH--HHHHHHhCCC-cEEEEecCCCceeeecC
Q 044659 114 -D---PM-EMENQFPNNEESVYLCQGHKDKLVPF--HRYRAKKLPR-IRYHEGSAGGHLMIHEK 169 (169)
Q Consensus 114 -~---~~-~~~~~~~~~~~P~l~~~g~~D~~v~~--~~~~~~~~~~-~~~~~~~~~gH~~~~e~ 169 (169)
. .. ........+++|+++++|++|.+.|. ...+.+..++ .++..++++||+.++++
T Consensus 204 ~~~~~~~~~~~~~~~~~~~P~l~i~g~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~ 267 (282)
T COG0596 204 ALLALLDRDLRAALARITVPTLIIHGEDDPVVPAELARRLAAALPNDARLVVIPGAGHFPHLEA 267 (282)
T ss_pred hhhcccccccchhhccCCCCeEEEecCCCCcCCHHHHHHHHhhCCCCceEEEeCCCCCcchhhc
Confidence 0 00 01112445789999999999977676 4677778885 89999999999998874
No 71
>PLN02442 S-formylglutathione hydrolase
Probab=99.48 E-value=1.2e-12 Score=96.52 Aligned_cols=155 Identities=16% Similarity=0.167 Sum_probs=87.5
Q ss_pred hhhhhcCcEEEEeCCCCCCCC-----C------CCC-------C-----C--C--hhhHHHHHHHHHHhcCCCCceEEEE
Q 044659 3 DFMDELGVYVLTFDRTGYGES-----D------PKP-------K-----R--P--VKIEAFDIQELANQLNLGHKFDVIG 55 (169)
Q Consensus 3 ~~l~~~g~~v~~~d~~G~G~s-----~------~~~-------~-----~--~--~~~~~~~~~~~~~~~~~~~~~~l~G 55 (169)
+.+.+.|+.|++||..++|.. . ... . . + .++....+++..+.++. ++++|+|
T Consensus 71 ~~~~~~g~~Vv~pd~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~-~~~~i~G 149 (283)
T PLN02442 71 RAAAARGIALVAPDTSPRGLNVEGEADSWDFGVGAGFYLNATQEKWKNWRMYDYVVKELPKLLSDNFDQLDT-SRASIFG 149 (283)
T ss_pred HHHhhcCeEEEecCCCCCCCCCCCCccccccCCCcceeeccccCCCcccchhhhHHHHHHHHHHHHHHhcCC-CceEEEE
Confidence 456677999999999877621 0 000 0 0 1 22333334444445566 7899999
Q ss_pred EcchHHHH-HHhhccccCCCc---ceEEEEeecchhhhhhhcccchhHHHHHHHHHhcCCC-CCchhhhccCCCCCCceE
Q 044659 56 ISILTYLF-GLVSNAHHTGIP---AGVALVVLVINYCITCRLQGAHESLHRDIMVHLGTWE-FDPMEMENQFPNNEESVY 130 (169)
Q Consensus 56 ~S~Gg~ia-~~~~~~~~~~~p---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~P~l 130 (169)
|||||..+ .++. .+| .+++.+++..... ..... ...+..........|. .++..........++|++
T Consensus 150 ~S~GG~~a~~~a~-----~~p~~~~~~~~~~~~~~~~--~~~~~-~~~~~~~~g~~~~~~~~~d~~~~~~~~~~~~~pvl 221 (283)
T PLN02442 150 HSMGGHGALTIYL-----KNPDKYKSVSAFAPIANPI--NCPWG-QKAFTNYLGSDKADWEEYDATELVSKFNDVSATIL 221 (283)
T ss_pred EChhHHHHHHHHH-----hCchhEEEEEEECCccCcc--cCchh-hHHHHHHcCCChhhHHHcChhhhhhhccccCCCEE
Confidence 99999999 8888 777 5566666654321 00000 0000000000000111 111111122345788999
Q ss_pred EEEeCCCCcchH-------HHHHHHhCCCcEEEEecCCCceee
Q 044659 131 LCQGHKDKLVPF-------HRYRAKKLPRIRYHEGSAGGHLMI 166 (169)
Q Consensus 131 ~~~g~~D~~v~~-------~~~~~~~~~~~~~~~~~~~gH~~~ 166 (169)
+++|++|.+++. .+.+.+.-.+.+++++|+.+|.++
T Consensus 222 i~~G~~D~~v~~~~~s~~~~~~l~~~g~~~~~~~~pg~~H~~~ 264 (283)
T PLN02442 222 IDQGEADKFLKEQLLPENFEEACKEAGAPVTLRLQPGYDHSYF 264 (283)
T ss_pred EEECCCCccccccccHHHHHHHHHHcCCCeEEEEeCCCCccHH
Confidence 999999999884 233333334689999999999764
No 72
>PRK07868 acyl-CoA synthetase; Validated
Probab=99.47 E-value=8.2e-13 Score=111.99 Aligned_cols=46 Identities=15% Similarity=0.106 Sum_probs=41.2
Q ss_pred CCCCCCceEEEEeCCCCcchH--HHHHHHhCCCcEE-EEecCCCceeee
Q 044659 122 FPNNEESVYLCQGHKDKLVPF--HRYRAKKLPRIRY-HEGSAGGHLMIH 167 (169)
Q Consensus 122 ~~~~~~P~l~~~g~~D~~v~~--~~~~~~~~~~~~~-~~~~~~gH~~~~ 167 (169)
+.++++|+|+++|++|.++|+ .+.+.+..++.++ ..++++||+.++
T Consensus 293 L~~i~~P~L~i~G~~D~ivp~~~~~~l~~~i~~a~~~~~~~~~GH~g~~ 341 (994)
T PRK07868 293 LADITCPVLAFVGEVDDIGQPASVRGIRRAAPNAEVYESLIRAGHFGLV 341 (994)
T ss_pred hhhCCCCEEEEEeCCCCCCCHHHHHHHHHhCCCCeEEEEeCCCCCEeee
Confidence 567999999999999999999 8888999999997 678999999765
No 73
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=99.42 E-value=3e-12 Score=103.69 Aligned_cols=155 Identities=16% Similarity=0.106 Sum_probs=92.2
Q ss_pred hhhhhcCcEEEEeCCCCCCC---CCCC--C----CCChhhHHHHHHHHHHhcC-C-CCceEEEEEcchHHHH-HHhhccc
Q 044659 3 DFMDELGVYVLTFDRTGYGE---SDPK--P----KRPVKIEAFDIQELANQLN-L-GHKFDVIGISILTYLF-GLVSNAH 70 (169)
Q Consensus 3 ~~l~~~g~~v~~~d~~G~G~---s~~~--~----~~~~~~~~~~~~~~~~~~~-~-~~~~~l~G~S~Gg~ia-~~~~~~~ 70 (169)
+.|...||.|+.++.||-+. .-.. . ....+|+.+.++ ++.+.+ . .++++|+|+|+||+++ +++.
T Consensus 417 q~~~~~G~~V~~~n~RGS~GyG~~F~~~~~~~~g~~~~~D~~~~~~-~l~~~~~~d~~ri~i~G~SyGGymtl~~~~--- 492 (620)
T COG1506 417 QVLASAGYAVLAPNYRGSTGYGREFADAIRGDWGGVDLEDLIAAVD-ALVKLPLVDPERIGITGGSYGGYMTLLAAT--- 492 (620)
T ss_pred HHHhcCCeEEEEeCCCCCCccHHHHHHhhhhccCCccHHHHHHHHH-HHHhCCCcChHHeEEeccChHHHHHHHHHh---
Confidence 45788899999999997554 2111 1 112555555555 445554 2 2589999999999999 8887
Q ss_pred cCCCc--ceEEEEeecchhhhhhhcccchhHHHHHHHH-HhcCCCCCchhh--hcc---CCCCCCceEEEEeCCCCcchH
Q 044659 71 HTGIP--AGVALVVLVINYCITCRLQGAHESLHRDIMV-HLGTWEFDPMEM--ENQ---FPNNEESVYLCQGHKDKLVPF 142 (169)
Q Consensus 71 ~~~~p--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~--~~~---~~~~~~P~l~~~g~~D~~v~~ 142 (169)
..| .+.+...+..+. +..+.... ..+...... ....+. +.+.+ ..| ..++++|+|++||++|..||.
T Consensus 493 --~~~~f~a~~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~sp~~~~~~i~~P~LliHG~~D~~v~~ 567 (620)
T COG1506 493 --KTPRFKAAVAVAGGVDW-LLYFGEST-EGLRFDPEENGGGPPE-DREKYEDRSPIFYADNIKTPLLLIHGEEDDRVPI 567 (620)
T ss_pred --cCchhheEEeccCcchh-hhhccccc-hhhcCCHHHhCCCccc-ChHHHHhcChhhhhcccCCCEEEEeecCCccCCh
Confidence 666 444444443332 11111111 111111111 111111 11111 122 456888999999999999998
Q ss_pred --HHHHHH----hCCCcEEEEecCCCceee
Q 044659 143 --HRYRAK----KLPRIRYHEGSAGGHLMI 166 (169)
Q Consensus 143 --~~~~~~----~~~~~~~~~~~~~gH~~~ 166 (169)
+..+.+ ...+.+++.+|+.+|.+.
T Consensus 568 ~q~~~~~~aL~~~g~~~~~~~~p~e~H~~~ 597 (620)
T COG1506 568 EQAEQLVDALKRKGKPVELVVFPDEGHGFS 597 (620)
T ss_pred HHHHHHHHHHHHcCceEEEEEeCCCCcCCC
Confidence 444444 444689999999999864
No 74
>KOG2564 consensus Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=99.40 E-value=4.7e-13 Score=95.72 Aligned_cols=73 Identities=18% Similarity=0.288 Sum_probs=54.3
Q ss_pred hhcCcEEEEeCCCCCCCCCCCCC--CChhhHHHHHHHHHHhcC--CCCceEEEEEcchHHHH-HHhhccccCCCc--ceE
Q 044659 6 DELGVYVLTFDRTGYGESDPKPK--RPVKIEAFDIQELANQLN--LGHKFDVIGISILTYLF-GLVSNAHHTGIP--AGV 78 (169)
Q Consensus 6 ~~~g~~v~~~d~~G~G~s~~~~~--~~~~~~~~~~~~~~~~~~--~~~~~~l~G~S~Gg~ia-~~~~~~~~~~~p--~~~ 78 (169)
.+...+|+++|+||||+|.-... -+.+..+.|+-.+++.+- ...+|+||||||||.|+ -.+. .+..| .++
T Consensus 99 s~~~~r~~a~DlRgHGeTk~~~e~dlS~eT~~KD~~~~i~~~fge~~~~iilVGHSmGGaIav~~a~---~k~lpsl~Gl 175 (343)
T KOG2564|consen 99 SKIRCRCLALDLRGHGETKVENEDDLSLETMSKDFGAVIKELFGELPPQIILVGHSMGGAIAVHTAA---SKTLPSLAGL 175 (343)
T ss_pred hhcceeEEEeeccccCccccCChhhcCHHHHHHHHHHHHHHHhccCCCceEEEeccccchhhhhhhh---hhhchhhhce
Confidence 44578999999999999965443 358889999999888864 22679999999999999 3332 01556 555
Q ss_pred EEE
Q 044659 79 ALV 81 (169)
Q Consensus 79 ~~~ 81 (169)
+++
T Consensus 176 ~vi 178 (343)
T KOG2564|consen 176 VVI 178 (343)
T ss_pred EEE
Confidence 555
No 75
>PF01738 DLH: Dienelactone hydrolase family; InterPro: IPR002925 Dienelactone hydrolases play a crucial role in chlorocatechol degradation via the modified ortho cleavage pathway. Enzymes induced in 4-fluorobenzoate-utilizing bacteria have been classified into three groups on the basis of their specificity towards cis- and trans-dienelactone []. Some proteins contain repeated small fragments of this domain (for example rat kan-1 protein).; GO: 0016787 hydrolase activity; PDB: 1GGV_A 1ZIY_A 1ZI6_A 1ZIC_A 1ZJ5_A 1ZI8_A 1ZJ4_A 1ZI9_A 1ZIX_A 3F67_A.
Probab=99.39 E-value=6.8e-12 Score=89.15 Aligned_cols=133 Identities=20% Similarity=0.119 Sum_probs=75.8
Q ss_pred hhhhhhcCcEEEEeCCCCCCCCCCCC-CCC-----------hhhHHHHHHHHHHhcC-----CCCceEEEEEcchHHHH-
Q 044659 2 QDFMDELGVYVLTFDRTGYGESDPKP-KRP-----------VKIEAFDIQELANQLN-----LGHKFDVIGISILTYLF- 63 (169)
Q Consensus 2 ~~~l~~~g~~v~~~d~~G~G~s~~~~-~~~-----------~~~~~~~~~~~~~~~~-----~~~~~~l~G~S~Gg~ia- 63 (169)
++.|++.||.|++||+-+-....... ... .+....++...++.+. ..+++.++|+|+||.++
T Consensus 34 ad~lA~~Gy~v~~pD~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~~l~~~~~~~~~kig~vGfc~GG~~a~ 113 (218)
T PF01738_consen 34 ADRLAEEGYVVLAPDLFGGRGAPPSDPEEAFAAMRELFAPRPEQVAADLQAAVDYLRAQPEVDPGKIGVVGFCWGGKLAL 113 (218)
T ss_dssp HHHHHHTT-EEEEE-CCCCTS--CCCHHCHHHHHHHCHHHSHHHHHHHHHHHHHHHHCTTTCEEEEEEEEEETHHHHHHH
T ss_pred HHHHHhcCCCEEecccccCCCCCccchhhHHHHHHHHHhhhHHHHHHHHHHHHHHHHhccccCCCcEEEEEEecchHHhh
Confidence 46788899999999987555411111 110 1234455544454442 11589999999999999
Q ss_pred HHhhccccCCCc--ceEEEEeecchhhhhhhcccchhHHHHHHHHHhcCCCCCchhhhccCCCCCCceEEEEeCCCCcch
Q 044659 64 GLVSNAHHTGIP--AGVALVVLVINYCITCRLQGAHESLHRDIMVHLGTWEFDPMEMENQFPNNEESVYLCQGHKDKLVP 141 (169)
Q Consensus 64 ~~~~~~~~~~~p--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~g~~D~~v~ 141 (169)
.++. ..+ .+.+...|.... .. ......++++|+++++|++|+.++
T Consensus 114 ~~a~-----~~~~~~a~v~~yg~~~~---------~~-------------------~~~~~~~~~~P~l~~~g~~D~~~~ 160 (218)
T PF01738_consen 114 LLAA-----RDPRVDAAVSFYGGSPP---------PP-------------------PLEDAPKIKAPVLILFGENDPFFP 160 (218)
T ss_dssp HHHC-----CTTTSSEEEEES-SSSG---------GG-------------------HHHHGGG--S-EEEEEETT-TTS-
T ss_pred hhhh-----hccccceEEEEcCCCCC---------Cc-------------------chhhhcccCCCEeecCccCCCCCC
Confidence 7777 545 555554440000 00 001123355669999999999999
Q ss_pred H--HHHHHHh----CCCcEEEEecCCCceeee
Q 044659 142 F--HRYRAKK----LPRIRYHEGSAGGHLMIH 167 (169)
Q Consensus 142 ~--~~~~~~~----~~~~~~~~~~~~gH~~~~ 167 (169)
. .+.+.+. -...+++.+||++|.++-
T Consensus 161 ~~~~~~~~~~l~~~~~~~~~~~y~ga~HgF~~ 192 (218)
T PF01738_consen 161 PEEVEALEEALKAAGVDVEVHVYPGAGHGFAN 192 (218)
T ss_dssp HHHHHHHHHHHHCTTTTEEEEEETT--TTTTS
T ss_pred hHHHHHHHHHHHhcCCcEEEEECCCCcccccC
Confidence 8 3444433 357899999999998764
No 76
>PLN00021 chlorophyllase
Probab=99.38 E-value=8.8e-12 Score=93.00 Aligned_cols=142 Identities=14% Similarity=0.000 Sum_probs=81.8
Q ss_pred hhhhhhcCcEEEEeCCCCCCCCCCCCCCChhhHH---HHHHHHHHh-------cCCCCceEEEEEcchHHHH-HHhhccc
Q 044659 2 QDFMDELGVYVLTFDRTGYGESDPKPKRPVKIEA---FDIQELANQ-------LNLGHKFDVIGISILTYLF-GLVSNAH 70 (169)
Q Consensus 2 ~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~---~~~~~~~~~-------~~~~~~~~l~G~S~Gg~ia-~~~~~~~ 70 (169)
.+.|++.||.|+++|++|++.+.. ...+++.. +.+.+.+++ .+. ++++++||||||.++ .++.
T Consensus 72 ~~~Las~G~~VvapD~~g~~~~~~--~~~i~d~~~~~~~l~~~l~~~l~~~~~~d~-~~v~l~GHS~GG~iA~~lA~--- 145 (313)
T PLN00021 72 LQHIASHGFIVVAPQLYTLAGPDG--TDEIKDAAAVINWLSSGLAAVLPEGVRPDL-SKLALAGHSRGGKTAFALAL--- 145 (313)
T ss_pred HHHHHhCCCEEEEecCCCcCCCCc--hhhHHHHHHHHHHHHhhhhhhcccccccCh-hheEEEEECcchHHHHHHHh---
Confidence 345678899999999999754321 11122222 222221111 233 689999999999999 7776
Q ss_pred cCCCc--------ceEEEEeecchhhhhhhcccchhHHHHHHHHHhcCCCCCchhhhccCCCCCCceEEEEeCCCC----
Q 044659 71 HTGIP--------AGVALVVLVINYCITCRLQGAHESLHRDIMVHLGTWEFDPMEMENQFPNNEESVYLCQGHKDK---- 138 (169)
Q Consensus 71 ~~~~p--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~g~~D~---- 138 (169)
..+ .+++.+.|.....+.. +.... . . . ......++.+|++++.+..|.
T Consensus 146 --~~~~~~~~~~v~ali~ldPv~g~~~~~--~~~p~-i-------l---~-----~~~~s~~~~~P~liig~g~~~~~~~ 205 (313)
T PLN00021 146 --GKAAVSLPLKFSALIGLDPVDGTSKGK--QTPPP-V-------L---T-----YAPHSFNLDIPVLVIGTGLGGEPRN 205 (313)
T ss_pred --hccccccccceeeEEeecccccccccc--CCCCc-c-------c---c-----cCcccccCCCCeEEEecCCCccccc
Confidence 332 4455555543321000 00000 0 0 0 111122366789999999652
Q ss_pred -----cchH---HHHHHHhC-CCcEEEEecCCCceeeecC
Q 044659 139 -----LVPF---HRYRAKKL-PRIRYHEGSAGGHLMIHEK 169 (169)
Q Consensus 139 -----~v~~---~~~~~~~~-~~~~~~~~~~~gH~~~~e~ 169 (169)
+.|. ...+++.. +++.+.+++++||+-++|+
T Consensus 206 ~~~p~~ap~~~~~~~f~~~~~~~~~~~~~~~~gH~~~~~~ 245 (313)
T PLN00021 206 PLFPPCAPDGVNHAEFFNECKAPAVHFVAKDYGHMDMLDD 245 (313)
T ss_pred ccccccCCCCCCHHHHHHhcCCCeeeeeecCCCcceeecC
Confidence 3334 46666555 4788889999999998774
No 77
>TIGR01840 esterase_phb esterase, PHB depolymerase family. This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi.
Probab=99.35 E-value=1.7e-11 Score=86.82 Aligned_cols=77 Identities=19% Similarity=0.168 Sum_probs=49.0
Q ss_pred hhhhhcCcEEEEeCCCCCCCCCCC-----CCC------ChhhHHHHHHHHHHhcCCC-CceEEEEEcchHHHH-HHhhcc
Q 044659 3 DFMDELGVYVLTFDRTGYGESDPK-----PKR------PVKIEAFDIQELANQLNLG-HKFDVIGISILTYLF-GLVSNA 69 (169)
Q Consensus 3 ~~l~~~g~~v~~~d~~G~G~s~~~-----~~~------~~~~~~~~~~~~~~~~~~~-~~~~l~G~S~Gg~ia-~~~~~~ 69 (169)
+.+.+.||.|++||.+|++.+... ... ...+..+.+.++.+..+++ ++++|+||||||.++ .++.
T Consensus 37 ~~a~~~g~~Vv~Pd~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~id~~~i~l~G~S~Gg~~a~~~a~-- 114 (212)
T TIGR01840 37 AAADRYGFVLVAPEQTSYNSSNNCWDWFFTHHRARGTGEVESLHQLIDAVKANYSIDPNRVYVTGLSAGGGMTAVLGC-- 114 (212)
T ss_pred HHHHhCCeEEEecCCcCccccCCCCCCCCccccCCCCccHHHHHHHHHHHHHhcCcChhheEEEEECHHHHHHHHHHH--
Confidence 445677999999999999754321 110 1222333333343444332 589999999999999 8877
Q ss_pred ccCCCc---ceEEEEeec
Q 044659 70 HHTGIP---AGVALVVLV 84 (169)
Q Consensus 70 ~~~~~p---~~~~~~~~~ 84 (169)
.+| .+++.+++.
T Consensus 115 ---~~p~~~~~~~~~~g~ 129 (212)
T TIGR01840 115 ---TYPDVFAGGASNAGL 129 (212)
T ss_pred ---hCchhheEEEeecCC
Confidence 677 555555543
No 78
>COG4757 Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.35 E-value=4.3e-12 Score=88.60 Aligned_cols=158 Identities=20% Similarity=0.127 Sum_probs=93.4
Q ss_pred hhhhhhcCcEEEEeCCCCCCCCCCCCCC----ChhhHHH-HHHHHHHhcC---CCCceEEEEEcchHHHH-HHhhccccC
Q 044659 2 QDFMDELGVYVLTFDRTGYGESDPKPKR----PVKIEAF-DIQELANQLN---LGHKFDVIGISILTYLF-GLVSNAHHT 72 (169)
Q Consensus 2 ~~~l~~~g~~v~~~d~~G~G~s~~~~~~----~~~~~~~-~~~~~~~~~~---~~~~~~l~G~S~Gg~ia-~~~~~~~~~ 72 (169)
+..+.+.||.|+++|+||.|.|++.... .+.||+. |+...+++++ .+.+.+++|||+||.+. .+..
T Consensus 50 A~~a~~~Gf~Vlt~dyRG~g~S~p~~~~~~~~~~~DwA~~D~~aal~~~~~~~~~~P~y~vgHS~GGqa~gL~~~----- 124 (281)
T COG4757 50 AAAAAKAGFEVLTFDYRGIGQSRPASLSGSQWRYLDWARLDFPAALAALKKALPGHPLYFVGHSFGGQALGLLGQ----- 124 (281)
T ss_pred HHHhhccCceEEEEecccccCCCccccccCccchhhhhhcchHHHHHHHHhhCCCCceEEeeccccceeeccccc-----
Confidence 4567788999999999999999875433 2666665 6666665543 23689999999999999 5554
Q ss_pred CCc-ceEEEEeecchhh-------------------------hhhh------ccc--chhHHHHHHHH-Hhc-CCCC-Cc
Q 044659 73 GIP-AGVALVVLVINYC-------------------------ITCR------LQG--AHESLHRDIMV-HLG-TWEF-DP 115 (169)
Q Consensus 73 ~~p-~~~~~~~~~~~~~-------------------------~~~~------~~~--~~~~~~~~~~~-~~~-~~~~-~~ 115 (169)
.+ .+...+.++...+ |..+ -.+ ......++... ... .+.+ ++
T Consensus 125 -~~k~~a~~vfG~gagwsg~m~~~~~l~~~~l~~lv~p~lt~w~g~~p~~l~G~G~d~p~~v~RdW~RwcR~p~y~fddp 203 (281)
T COG4757 125 -HPKYAAFAVFGSGAGWSGWMGLRERLGAVLLWNLVGPPLTFWKGYMPKDLLGLGSDLPGTVMRDWARWCRHPRYYFDDP 203 (281)
T ss_pred -CcccceeeEeccccccccchhhhhcccceeeccccccchhhccccCcHhhcCCCccCcchHHHHHHHHhcCccccccCh
Confidence 22 1122221111111 1000 000 01112222221 111 1112 12
Q ss_pred hh--hhccCCCCCCceEEEEeCCCCcchH--HHHHHHhCCCc--EEEEecC----CCcee
Q 044659 116 ME--MENQFPNNEESVYLCQGHKDKLVPF--HRYRAKKLPRI--RYHEGSA----GGHLM 165 (169)
Q Consensus 116 ~~--~~~~~~~~~~P~l~~~g~~D~~v~~--~~~~~~~~~~~--~~~~~~~----~gH~~ 165 (169)
.. +.+...++++|++++..++|+.+|+ .+.+..-++++ +.+.++. .||+-
T Consensus 204 ~~~~~~q~yaaVrtPi~~~~~~DD~w~P~As~d~f~~~y~nApl~~~~~~~~~~~lGH~g 263 (281)
T COG4757 204 AMRNYRQVYAAVRTPITFSRALDDPWAPPASRDAFASFYRNAPLEMRDLPRAEGPLGHMG 263 (281)
T ss_pred hHhHHHHHHHHhcCceeeeccCCCCcCCHHHHHHHHHhhhcCcccceecCcccCcccchh
Confidence 21 2344667999999999999999999 78888888765 4455543 47874
No 79
>PF06342 DUF1057: Alpha/beta hydrolase of unknown function (DUF1057); InterPro: IPR010463 This entry consists of proteins of unknown function which have an alpha/beta hydrolase fold.
Probab=99.35 E-value=7.1e-11 Score=85.10 Aligned_cols=80 Identities=19% Similarity=0.217 Sum_probs=69.2
Q ss_pred ChhhhhhcCcEEEEeCCCCCCCCCCCCCCC--hhhHHHHHHHHHHhcCCCCceEEEEEcchHHHH-HHhhccccCCCc-c
Q 044659 1 MQDFMDELGVYVLTFDRTGYGESDPKPKRP--VKIEAFDIQELANQLNLGHKFDVIGISILTYLF-GLVSNAHHTGIP-A 76 (169)
Q Consensus 1 ~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~ia-~~~~~~~~~~~p-~ 76 (169)
|...|.+.|.|+|...+||+|.++..+... -.+...-..++++.+++.+++.++|||.|+-.| .++. .+| .
T Consensus 54 i~~~l~~~~iR~I~iN~PGf~~t~~~~~~~~~n~er~~~~~~ll~~l~i~~~~i~~gHSrGcenal~la~-----~~~~~ 128 (297)
T PF06342_consen 54 IRPPLDEAGIRFIGINYPGFGFTPGYPDQQYTNEERQNFVNALLDELGIKGKLIFLGHSRGCENALQLAV-----THPLH 128 (297)
T ss_pred hhhHHHHcCeEEEEeCCCCCCCCCCCcccccChHHHHHHHHHHHHHcCCCCceEEEEeccchHHHHHHHh-----cCccc
Confidence 356789999999999999999998776553 667777889999999987889999999999999 8888 778 8
Q ss_pred eEEEEeecc
Q 044659 77 GVALVVLVI 85 (169)
Q Consensus 77 ~~~~~~~~~ 85 (169)
++++++|+.
T Consensus 129 g~~lin~~G 137 (297)
T PF06342_consen 129 GLVLINPPG 137 (297)
T ss_pred eEEEecCCc
Confidence 999998765
No 80
>PRK11460 putative hydrolase; Provisional
Probab=99.28 E-value=1.3e-10 Score=83.48 Aligned_cols=82 Identities=15% Similarity=0.093 Sum_probs=56.2
Q ss_pred CceEEEEEcchHHHH-HHhhccccCCCc---ceEEEEeecchhhhhhhcccchhHHHHHHHHHhcCCCCCchhhhccCCC
Q 044659 49 HKFDVIGISILTYLF-GLVSNAHHTGIP---AGVALVVLVINYCITCRLQGAHESLHRDIMVHLGTWEFDPMEMENQFPN 124 (169)
Q Consensus 49 ~~~~l~G~S~Gg~ia-~~~~~~~~~~~p---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 124 (169)
++++++|||+||.++ .++. ..| .+++.+++..+. .. . ...
T Consensus 103 ~~i~l~GfS~Gg~~al~~a~-----~~~~~~~~vv~~sg~~~~---------~~---------------~-------~~~ 146 (232)
T PRK11460 103 SATALIGFSQGAIMALEAVK-----AEPGLAGRVIAFSGRYAS---------LP---------------E-------TAP 146 (232)
T ss_pred hhEEEEEECHHHHHHHHHHH-----hCCCcceEEEEecccccc---------cc---------------c-------ccc
Confidence 589999999999999 7777 556 334443331110 00 0 011
Q ss_pred CCCceEEEEeCCCCcchH--HHHHHHhCC----CcEEEEecCCCceee
Q 044659 125 NEESVYLCQGHKDKLVPF--HRYRAKKLP----RIRYHEGSAGGHLMI 166 (169)
Q Consensus 125 ~~~P~l~~~g~~D~~v~~--~~~~~~~~~----~~~~~~~~~~gH~~~ 166 (169)
.+.|++++||++|+++|. .+.+.+.+. +.+++.+|++||.+.
T Consensus 147 ~~~pvli~hG~~D~vvp~~~~~~~~~~L~~~g~~~~~~~~~~~gH~i~ 194 (232)
T PRK11460 147 TATTIHLIHGGEDPVIDVAHAVAAQEALISLGGDVTLDIVEDLGHAID 194 (232)
T ss_pred CCCcEEEEecCCCCccCHHHHHHHHHHHHHCCCCeEEEEECCCCCCCC
Confidence 356799999999999998 555554443 578999999999875
No 81
>PRK05371 x-prolyl-dipeptidyl aminopeptidase; Provisional
Probab=99.21 E-value=4.7e-10 Score=92.58 Aligned_cols=80 Identities=19% Similarity=0.137 Sum_probs=55.5
Q ss_pred hhhhhhcCcEEEEeCCCCCCCCCCCCCCChhhHHHHHHHHHHhcC------------------C-CCceEEEEEcchHHH
Q 044659 2 QDFMDELGVYVLTFDRTGYGESDPKPKRPVKIEAFDIQELANQLN------------------L-GHKFDVIGISILTYL 62 (169)
Q Consensus 2 ~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~------------------~-~~~~~l~G~S~Gg~i 62 (169)
.+.+.++||.|+..|.||.|.|++.......+..+|..++++.+. + ..+|.++|.|+||.+
T Consensus 272 ~~~~~~rGYaVV~~D~RGtg~SeG~~~~~~~~E~~D~~~vIeWl~~~~~~~~d~~~~~~~kq~WsnGkVGm~G~SY~G~~ 351 (767)
T PRK05371 272 NDYFLPRGFAVVYVSGIGTRGSDGCPTTGDYQEIESMKAVIDWLNGRATAYTDRTRGKEVKADWSNGKVAMTGKSYLGTL 351 (767)
T ss_pred HHHHHhCCeEEEEEcCCCCCCCCCcCccCCHHHHHHHHHHHHHHhhCCccccccccccccccCCCCCeeEEEEEcHHHHH
Confidence 356788899999999999999987643322344455544444432 1 258999999999999
Q ss_pred H-HHhhccccCCCc---ceEEEEeecch
Q 044659 63 F-GLVSNAHHTGIP---AGVALVVLVIN 86 (169)
Q Consensus 63 a-~~~~~~~~~~~p---~~~~~~~~~~~ 86 (169)
+ ++|. ..| +.++..++..+
T Consensus 352 ~~~aAa-----~~pp~LkAIVp~a~is~ 374 (767)
T PRK05371 352 PNAVAT-----TGVEGLETIIPEAAISS 374 (767)
T ss_pred HHHHHh-----hCCCcceEEEeeCCCCc
Confidence 9 7766 544 55555555543
No 82
>PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic. The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A.
Probab=99.20 E-value=1e-10 Score=80.04 Aligned_cols=114 Identities=14% Similarity=0.074 Sum_probs=70.4
Q ss_pred ChhhHHHHHHHHHHhcCCCCceEEEEEcchHHHH-HHhhccccCCCc-ceEEEEeecchhhhhhhcccchhHHHHHHHHH
Q 044659 30 PVKIEAFDIQELANQLNLGHKFDVIGISILTYLF-GLVSNAHHTGIP-AGVALVVLVINYCITCRLQGAHESLHRDIMVH 107 (169)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~ia-~~~~~~~~~~~p-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 107 (169)
..++|...+.+.+..+ +++++|||||+|+..+ .+++ .....+ .++++++|.... .... ... .
T Consensus 38 ~~~~W~~~l~~~i~~~--~~~~ilVaHSLGc~~~l~~l~--~~~~~~v~g~lLVAp~~~~--~~~~--~~~--------~ 101 (171)
T PF06821_consen 38 DLDEWVQALDQAIDAI--DEPTILVAHSLGCLTALRWLA--EQSQKKVAGALLVAPFDPD--DPEP--FPP--------E 101 (171)
T ss_dssp -HHHHHHHHHHCCHC---TTTEEEEEETHHHHHHHHHHH--HTCCSSEEEEEEES--SCG--CHHC--CTC--------G
T ss_pred CHHHHHHHHHHHHhhc--CCCeEEEEeCHHHHHHHHHHh--hcccccccEEEEEcCCCcc--cccc--hhh--------h
Confidence 3777877777777765 3579999999999999 6663 111223 888888886552 0000 000 0
Q ss_pred hcCCCCCchhhhccCCCCCCceEEEEeCCCCcchH--HHHHHHhCCCcEEEEecCCCceee
Q 044659 108 LGTWEFDPMEMENQFPNNEESVYLCQGHKDKLVPF--HRYRAKKLPRIRYHEGSAGGHLMI 166 (169)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~P~l~~~g~~D~~v~~--~~~~~~~~~~~~~~~~~~~gH~~~ 166 (169)
.. .|. ..+.....+|.+++.+++|+.+|. ++.+++.+ +++++.++++||+.-
T Consensus 102 ~~--~f~----~~p~~~l~~~~~viaS~nDp~vp~~~a~~~A~~l-~a~~~~~~~~GHf~~ 155 (171)
T PF06821_consen 102 LD--GFT----PLPRDPLPFPSIVIASDNDPYVPFERAQRLAQRL-GAELIILGGGGHFNA 155 (171)
T ss_dssp GC--CCT----TSHCCHHHCCEEEEEETTBSSS-HHHHHHHHHHH-T-EEEEETS-TTSSG
T ss_pred cc--ccc----cCcccccCCCeEEEEcCCCCccCHHHHHHHHHHc-CCCeEECCCCCCccc
Confidence 00 011 112222334479999999999999 88888888 799999999999853
No 83
>PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate []. This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C.
Probab=99.17 E-value=1.1e-09 Score=83.49 Aligned_cols=154 Identities=16% Similarity=0.166 Sum_probs=78.0
Q ss_pred hhhhhcCcEEEEeCCCCCCCCCCCCC-CChhhHHHHHHHHHHhcC-C-CCceEEEEEcchHHHH-HHhhccccCCC-c--
Q 044659 3 DFMDELGVYVLTFDRTGYGESDPKPK-RPVKIEAFDIQELANQLN-L-GHKFDVIGISILTYLF-GLVSNAHHTGI-P-- 75 (169)
Q Consensus 3 ~~l~~~g~~v~~~d~~G~G~s~~~~~-~~~~~~~~~~~~~~~~~~-~-~~~~~l~G~S~Gg~ia-~~~~~~~~~~~-p-- 75 (169)
+.|..+|+.++++|+||.|.|...+. .+.+.....+...+.... + ..+|.++|.|+||.+| .++. .. +
T Consensus 212 ~~l~~rGiA~LtvDmPG~G~s~~~~l~~D~~~l~~aVLd~L~~~p~VD~~RV~~~G~SfGGy~AvRlA~-----le~~Rl 286 (411)
T PF06500_consen 212 DYLAPRGIAMLTVDMPGQGESPKWPLTQDSSRLHQAVLDYLASRPWVDHTRVGAWGFSFGGYYAVRLAA-----LEDPRL 286 (411)
T ss_dssp CCCHHCT-EEEEE--TTSGGGTTT-S-S-CCHHHHHHHHHHHHSTTEEEEEEEEEEETHHHHHHHHHHH-----HTTTT-
T ss_pred HHHHhCCCEEEEEccCCCcccccCCCCcCHHHHHHHHHHHHhcCCccChhheEEEEeccchHHHHHHHH-----hcccce
Confidence 34678899999999999999854322 223333334444444443 1 1689999999999999 6554 33 2
Q ss_pred ceEEEEeecchhhh-h-hhcccchhHHHHHHHHH-hcCCCCCchhh----------hc-cC--CCCCCceEEEEeCCCCc
Q 044659 76 AGVALVVLVINYCI-T-CRLQGAHESLHRDIMVH-LGTWEFDPMEM----------EN-QF--PNNEESVYLCQGHKDKL 139 (169)
Q Consensus 76 ~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~-~~~~~~~~~~~----------~~-~~--~~~~~P~l~~~g~~D~~ 139 (169)
++++.+++..-... + ...+. .+.+..+.... .+.-..+.+.+ .. -+ ...++|+|.+.+++|++
T Consensus 287 kavV~~Ga~vh~~ft~~~~~~~-~P~my~d~LA~rlG~~~~~~~~l~~el~~~SLk~qGlL~~rr~~~plL~i~~~~D~v 365 (411)
T PF06500_consen 287 KAVVALGAPVHHFFTDPEWQQR-VPDMYLDVLASRLGMAAVSDESLRGELNKFSLKTQGLLSGRRCPTPLLAINGEDDPV 365 (411)
T ss_dssp SEEEEES---SCGGH-HHHHTT-S-HHHHHHHHHHCT-SCE-HHHHHHHGGGGSTTTTTTTTSS-BSS-EEEEEETT-SS
T ss_pred eeEeeeCchHhhhhccHHHHhc-CCHHHHHHHHHHhCCccCCHHHHHHHHHhcCcchhccccCCCCCcceEEeecCCCCC
Confidence 77777776543221 0 11111 11112222111 11000011111 00 02 45778899999999999
Q ss_pred chH--HHHHHHhCCCcEEEEecCCC
Q 044659 140 VPF--HRYRAKKLPRIRYHEGSAGG 162 (169)
Q Consensus 140 v~~--~~~~~~~~~~~~~~~~~~~g 162 (169)
.|. .+.++....+.+...++...
T Consensus 366 ~P~eD~~lia~~s~~gk~~~~~~~~ 390 (411)
T PF06500_consen 366 SPIEDSRLIAESSTDGKALRIPSKP 390 (411)
T ss_dssp S-HHHHHHHHHTBTT-EEEEE-SSS
T ss_pred CCHHHHHHHHhcCCCCceeecCCCc
Confidence 999 66666666667777777543
No 84
>TIGR01839 PHA_synth_II poly(R)-hydroxyalkanoic acid synthase, class II. This model represents the class II subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs, typically with six to fourteen carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=99.16 E-value=1.6e-09 Score=85.58 Aligned_cols=60 Identities=5% Similarity=0.054 Sum_probs=46.3
Q ss_pred hhhhhhcCcEEEEeCCCCCCCCCCCCCCChhhHHHHHHHHHHhc----CCCCceEEEEEcchHHHH-H
Q 044659 2 QDFMDELGVYVLTFDRTGYGESDPKPKRPVKIEAFDIQELANQL----NLGHKFDVIGISILTYLF-G 64 (169)
Q Consensus 2 ~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~l~G~S~Gg~ia-~ 64 (169)
.+.|.++||+|+++|++.=+... ...+++++.+.+.+.++.+ +. ++++++|+||||.++ .
T Consensus 240 Vr~lv~qG~~VflIsW~nP~~~~--r~~~ldDYv~~i~~Ald~V~~~tG~-~~vnl~GyC~GGtl~a~ 304 (560)
T TIGR01839 240 VQYCLKNQLQVFIISWRNPDKAH--REWGLSTYVDALKEAVDAVRAITGS-RDLNLLGACAGGLTCAA 304 (560)
T ss_pred HHHHHHcCCeEEEEeCCCCChhh--cCCCHHHHHHHHHHHHHHHHHhcCC-CCeeEEEECcchHHHHH
Confidence 56788999999999999866553 3345777776666655554 44 789999999999999 6
No 85
>PF07859 Abhydrolase_3: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR013094 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents the catalytic domain fold-3 of alpha/beta hydrolase. ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3D7R_B 2C7B_B 3ZWQ_B 2YH2_B 3BXP_A 3D3N_A 1LZK_A 1LZL_A 2O7V_A 2O7R_A ....
Probab=99.16 E-value=5.6e-10 Score=78.73 Aligned_cols=157 Identities=17% Similarity=0.088 Sum_probs=88.6
Q ss_pred hhhcCcEEEEeCCCCCCCCCCCCCCC-hhhHHHHHHHHHHh-----cCCCCceEEEEEcchHHHH-HHhhccccCCCc--
Q 044659 5 MDELGVYVLTFDRTGYGESDPKPKRP-VKIEAFDIQELANQ-----LNLGHKFDVIGISILTYLF-GLVSNAHHTGIP-- 75 (169)
Q Consensus 5 l~~~g~~v~~~d~~G~G~s~~~~~~~-~~~~~~~~~~~~~~-----~~~~~~~~l~G~S~Gg~ia-~~~~~~~~~~~p-- 75 (169)
+.+.|+.|+.+|+|=..+ .+... ++|..+-++.+++. .+. ++|+|+|+|.||.++ .++........+
T Consensus 25 a~~~g~~v~~~~Yrl~p~---~~~p~~~~D~~~a~~~l~~~~~~~~~d~-~~i~l~G~SAGg~la~~~~~~~~~~~~~~~ 100 (211)
T PF07859_consen 25 AAERGFVVVSIDYRLAPE---APFPAALEDVKAAYRWLLKNADKLGIDP-ERIVLIGDSAGGHLALSLALRARDRGLPKP 100 (211)
T ss_dssp HHHHTSEEEEEE---TTT---SSTTHHHHHHHHHHHHHHHTHHHHTEEE-EEEEEEEETHHHHHHHHHHHHHHHTTTCHE
T ss_pred HhhccEEEEEeecccccc---ccccccccccccceeeeccccccccccc-cceEEeecccccchhhhhhhhhhhhcccch
Confidence 445899999999994321 12222 66666666666666 334 799999999999999 655533333222
Q ss_pred ceEEEEeecchh-h--hhh------hccc-ch-hHHHHHH-HHHhcCCCCCchhhhccC----CCCCCceEEEEeCCCCc
Q 044659 76 AGVALVVLVINY-C--ITC------RLQG-AH-ESLHRDI-MVHLGTWEFDPMEMENQF----PNNEESVYLCQGHKDKL 139 (169)
Q Consensus 76 ~~~~~~~~~~~~-~--~~~------~~~~-~~-~~~~~~~-~~~~~~~~~~~~~~~~~~----~~~~~P~l~~~g~~D~~ 139 (169)
.++++++|.... . ... .... .. ....... ....+....+ .....|. ..--.|+++++|++|.+
T Consensus 101 ~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~sp~~~~~~~~~Pp~~i~~g~~D~l 179 (211)
T PF07859_consen 101 KGIILISPWTDLQDFDGPSYDDSNENKDDPFLPAPKIDWFWKLYLPGSDRD-DPLASPLNASDLKGLPPTLIIHGEDDVL 179 (211)
T ss_dssp SEEEEESCHSSTSTSSCHHHHHHHHHSTTSSSBHHHHHHHHHHHHSTGGTT-STTTSGGGSSCCTTCHEEEEEEETTSTT
T ss_pred hhhhcccccccchhccccccccccccccccccccccccccccccccccccc-ccccccccccccccCCCeeeeccccccc
Confidence 889999987543 1 011 1111 00 1111111 1111111111 0011111 12245899999999999
Q ss_pred chH----HHHHHHhCCCcEEEEecCCCceee
Q 044659 140 VPF----HRYRAKKLPRIRYHEGSAGGHLMI 166 (169)
Q Consensus 140 v~~----~~~~~~~~~~~~~~~~~~~gH~~~ 166 (169)
++. .+++.+.-..++++++++.+|.+.
T Consensus 180 ~~~~~~~~~~L~~~gv~v~~~~~~g~~H~f~ 210 (211)
T PF07859_consen 180 VDDSLRFAEKLKKAGVDVELHVYPGMPHGFF 210 (211)
T ss_dssp HHHHHHHHHHHHHTT-EEEEEEETTEETTGG
T ss_pred hHHHHHHHHHHHHCCCCEEEEEECCCeEEee
Confidence 877 555665555689999999999765
No 86
>PF08840 BAAT_C: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro: IPR014940 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH. Bile acid-CoA:amino acid N-acetyltransferase (BAAT) is involved in bile acid metabolism and may also act as an acyl-CoA thioesterase that regulates intracellular levels of free fatty acids []. This entry represents a catalytic domain is found at the C terminus of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases. ; PDB: 3K2I_B 3HLK_B.
Probab=99.13 E-value=1.4e-10 Score=82.26 Aligned_cols=113 Identities=20% Similarity=0.153 Sum_probs=55.4
Q ss_pred CceEEEEEcchHHHH-HHhhccccCCCc--ceEEEEeecchhhhh-hhccc---chhHHHHHHHH-------HhcCC-CC
Q 044659 49 HKFDVIGISILTYLF-GLVSNAHHTGIP--AGVALVVLVINYCIT-CRLQG---AHESLHRDIMV-------HLGTW-EF 113 (169)
Q Consensus 49 ~~~~l~G~S~Gg~ia-~~~~~~~~~~~p--~~~~~~~~~~~~~~~-~~~~~---~~~~~~~~~~~-------~~~~~-~~ 113 (169)
++|.|+|.|.||-+| .++. .+| ..+|.++|....+.. ..... ..+.+..+... ....+ .+
T Consensus 22 ~~Igi~G~SkGaelALllAs-----~~~~i~avVa~~ps~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~~~~~~~~ 96 (213)
T PF08840_consen 22 DKIGIIGISKGAELALLLAS-----RFPQISAVVAISPSSVVFQGIGFYRDSSKPLPYLPFDISKFSWNEPGLLRSRYAF 96 (213)
T ss_dssp SSEEEEEETHHHHHHHHHHH-----HSSSEEEEEEES--SB--SSEEEETTE--EE----B-GGG-EE-TTS-EE-TT-B
T ss_pred CCEEEEEECHHHHHHHHHHh-----cCCCccEEEEeCCceeEecchhcccCCCccCCcCCcChhhceecCCcceehhhhh
Confidence 689999999999999 8888 888 666666664433210 00000 00101000000 00000 00
Q ss_pred --C----chhhhccCCCCCCceEEEEeCCCCcchH---HHHHHHh----CC--CcEEEEecCCCceee
Q 044659 114 --D----PMEMENQFPNNEESVYLCQGHKDKLVPF---HRYRAKK----LP--RIRYHEGSAGGHLMI 166 (169)
Q Consensus 114 --~----~~~~~~~~~~~~~P~l~~~g~~D~~v~~---~~~~~~~----~~--~~~~~~~~~~gH~~~ 166 (169)
. ......|..++++|+|++.|++|.+.|. ++.+.++ -. +.+.+.+|++||++.
T Consensus 97 ~~~~~~~~~~a~IpvE~i~~piLli~g~dD~~WpS~~~a~~i~~rL~~~~~~~~~~~l~Y~~aGH~i~ 164 (213)
T PF08840_consen 97 ELADDKAVEEARIPVEKIKGPILLISGEDDQIWPSSEMAEQIEERLKAAGFPHNVEHLSYPGAGHLIE 164 (213)
T ss_dssp --TTTGGGCCCB--GGG--SEEEEEEETT-SSS-HHHHHHHHHHHHHCTT-----EEEEETTB-S---
T ss_pred hcccccccccccccHHHcCCCEEEEEeCCCCccchHHHHHHHHHHHHHhCCCCcceEEEcCCCCceec
Confidence 0 1112345667899999999999999999 4433332 22 368889999999974
No 87
>TIGR03230 lipo_lipase lipoprotein lipase. Members of this protein family are lipoprotein lipase (EC 3.1.1.34), a eukaryotic triacylglycerol lipase active in plasma and similar to pancreatic and hepatic triacylglycerol lipases (EC 3.1.1.3). It is also called clearing factor. It cleaves chylomicron and VLDL triacylglycerols; it also has phospholipase A-1 activity.
Probab=99.13 E-value=2.4e-10 Score=88.32 Aligned_cols=73 Identities=11% Similarity=0.010 Sum_probs=54.2
Q ss_pred CcEEEEeCCCCCCCCCCCCC-CChhhHHHHHHHHHHhc------CCCCceEEEEEcchHHHH-HHhhccccCCCc---ce
Q 044659 9 GVYVLTFDRTGYGESDPKPK-RPVKIEAFDIQELANQL------NLGHKFDVIGISILTYLF-GLVSNAHHTGIP---AG 77 (169)
Q Consensus 9 g~~v~~~d~~G~G~s~~~~~-~~~~~~~~~~~~~~~~~------~~~~~~~l~G~S~Gg~ia-~~~~~~~~~~~p---~~ 77 (169)
+|+|+++|++|+|.+..... ......++++.++++.+ ++ ++++|+||||||.+| .++. ..| .+
T Consensus 73 d~nVI~VDw~g~g~s~y~~a~~~t~~vg~~la~lI~~L~~~~gl~l-~~VhLIGHSLGAhIAg~ag~-----~~p~rV~r 146 (442)
T TIGR03230 73 SANVIVVDWLSRAQQHYPTSAAYTKLVGKDVAKFVNWMQEEFNYPW-DNVHLLGYSLGAHVAGIAGS-----LTKHKVNR 146 (442)
T ss_pred CCEEEEEECCCcCCCCCccccccHHHHHHHHHHHHHHHHHhhCCCC-CcEEEEEECHHHHHHHHHHH-----hCCcceeE
Confidence 69999999999998754322 23455556666666644 35 799999999999999 7777 666 67
Q ss_pred EEEEeecchh
Q 044659 78 VALVVLVINY 87 (169)
Q Consensus 78 ~~~~~~~~~~ 87 (169)
++.+.|+.+.
T Consensus 147 ItgLDPAgP~ 156 (442)
T TIGR03230 147 ITGLDPAGPT 156 (442)
T ss_pred EEEEcCCCCc
Confidence 8888877664
No 88
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=99.12 E-value=5.9e-10 Score=79.17 Aligned_cols=105 Identities=20% Similarity=0.268 Sum_probs=61.9
Q ss_pred hhhHHHHHHHHHHhc---CC-CCceEEEEEcchHHHH-HHhhccccCCCc---ceEEEEeecchhhhhhhcccchhHHHH
Q 044659 31 VKIEAFDIQELANQL---NL-GHKFDVIGISILTYLF-GLVSNAHHTGIP---AGVALVVLVINYCITCRLQGAHESLHR 102 (169)
Q Consensus 31 ~~~~~~~~~~~~~~~---~~-~~~~~l~G~S~Gg~ia-~~~~~~~~~~~p---~~~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (169)
+.+..+.+.++++.. ++ .+++++.|+|+||.++ .++. ..| .+++.+++..+. ...+.
T Consensus 83 i~~s~~~l~~li~~~~~~~i~~~ri~l~GFSQGa~~al~~~l-----~~p~~~~gvv~lsG~~~~---------~~~~~- 147 (216)
T PF02230_consen 83 IEESAERLDELIDEEVAYGIDPSRIFLGGFSQGAAMALYLAL-----RYPEPLAGVVALSGYLPP---------ESELE- 147 (216)
T ss_dssp HHHHHHHHHHHHHHHHHTT--GGGEEEEEETHHHHHHHHHHH-----CTSSTSSEEEEES---TT---------GCCCH-
T ss_pred HHHHHHHHHHHHHHHHHcCCChhheehhhhhhHHHHHHHHHH-----HcCcCcCEEEEeeccccc---------ccccc-
Confidence 444444444544432 22 1689999999999999 7777 665 788888875553 00000
Q ss_pred HHHHHhcCCCCCchhhhccCCCCCCceEEEEeCCCCcchH--HH----HHHHhCCCcEEEEecCCCceee
Q 044659 103 DIMVHLGTWEFDPMEMENQFPNNEESVYLCQGHKDKLVPF--HR----YRAKKLPRIRYHEGSAGGHLMI 166 (169)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~g~~D~~v~~--~~----~~~~~~~~~~~~~~~~~gH~~~ 166 (169)
.. .....+.|++++||++|+++|. .+ .+.+...+.+++.+++.||-+.
T Consensus 148 ----------~~------~~~~~~~pi~~~hG~~D~vvp~~~~~~~~~~L~~~~~~v~~~~~~g~gH~i~ 201 (216)
T PF02230_consen 148 ----------DR------PEALAKTPILIIHGDEDPVVPFEWAEKTAEFLKAAGANVEFHEYPGGGHEIS 201 (216)
T ss_dssp ----------CC------HCCCCTS-EEEEEETT-SSSTHHHHHHHHHHHHCTT-GEEEEEETT-SSS--
T ss_pred ----------cc------ccccCCCcEEEEecCCCCcccHHHHHHHHHHHHhcCCCEEEEEcCCCCCCCC
Confidence 00 0111156799999999999998 33 3333334689999999999765
No 89
>PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO. One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised.
Probab=99.12 E-value=2.3e-09 Score=74.26 Aligned_cols=127 Identities=12% Similarity=0.071 Sum_probs=74.1
Q ss_pred hhhHHHHHHHHHHhcCCCCceEEEEEcchHHHH-HHhhccccCCCcceEEEEeecchhhhh--hh-cccchhHHHHHHHH
Q 044659 31 VKIEAFDIQELANQLNLGHKFDVIGISILTYLF-GLVSNAHHTGIPAGVALVVLVINYCIT--CR-LQGAHESLHRDIMV 106 (169)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~ia-~~~~~~~~~~~p~~~~~~~~~~~~~~~--~~-~~~~~~~~~~~~~~ 106 (169)
..+..+.+.++++.... +.+.|+|.||||+.| .++. .++...+++.|+..++.. .+ -......+......
T Consensus 42 p~~a~~~l~~~i~~~~~-~~~~liGSSlGG~~A~~La~-----~~~~~avLiNPav~p~~~l~~~iG~~~~~~~~e~~~~ 115 (187)
T PF05728_consen 42 PEEAIAQLEQLIEELKP-ENVVLIGSSLGGFYATYLAE-----RYGLPAVLINPAVRPYELLQDYIGEQTNPYTGESYEL 115 (187)
T ss_pred HHHHHHHHHHHHHhCCC-CCeEEEEEChHHHHHHHHHH-----HhCCCEEEEcCCCCHHHHHHHhhCccccCCCCcccee
Confidence 55666777888888876 569999999999999 8888 777555889988775321 00 00000000000000
Q ss_pred HhcCCCCCchhhhccCCCCCCceEEEEeCCCCcchHHHHHHHhCCCcEEEEecCCCcee
Q 044659 107 HLGTWEFDPMEMENQFPNNEESVYLCQGHKDKLVPFHRYRAKKLPRIRYHEGSAGGHLM 165 (169)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~P~l~~~g~~D~~v~~~~~~~~~~~~~~~~~~~~~gH~~ 165 (169)
.. ........+..+......++++++++.|.+++..+. .+.+.+...++.+|++|-+
T Consensus 116 ~~-~~~~~l~~l~~~~~~~~~~~lvll~~~DEvLd~~~a-~~~~~~~~~~i~~ggdH~f 172 (187)
T PF05728_consen 116 TE-EHIEELKALEVPYPTNPERYLVLLQTGDEVLDYREA-VAKYRGCAQIIEEGGDHSF 172 (187)
T ss_pred ch-HhhhhcceEeccccCCCccEEEEEecCCcccCHHHH-HHHhcCceEEEEeCCCCCC
Confidence 00 000001111222233456799999999999998333 3333445555667889965
No 90
>TIGR00976 /NonD putative hydrolase, CocE/NonD family. This model represents a protein subfamily that includes the cocaine esterase CocE, several glutaryl-7-ACA acylases, and the putative diester hydrolase NonD of Streptomyces griseus (all hydrolases). This family shows extensive, low-level similarity to a family of xaa-pro dipeptidyl-peptidases, and local similarity by PSI-BLAST to many other hydrolases.
Probab=99.11 E-value=1.5e-09 Score=87.09 Aligned_cols=78 Identities=21% Similarity=0.118 Sum_probs=54.1
Q ss_pred hhhhhcCcEEEEeCCCCCCCCCCCCCCChhhHHHHHHHHHHhcC----CCCceEEEEEcchHHHH-HHhhccccCCCc--
Q 044659 3 DFMDELGVYVLTFDRTGYGESDPKPKRPVKIEAFDIQELANQLN----LGHKFDVIGISILTYLF-GLVSNAHHTGIP-- 75 (169)
Q Consensus 3 ~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~l~G~S~Gg~ia-~~~~~~~~~~~p-- 75 (169)
+.|.++||.|+++|+||+|.|+..........++|+.++++.+. .+.++.++|+|+||.++ .++. ..|
T Consensus 47 ~~l~~~Gy~vv~~D~RG~g~S~g~~~~~~~~~~~D~~~~i~~l~~q~~~~~~v~~~G~S~GG~~a~~~a~-----~~~~~ 121 (550)
T TIGR00976 47 AWFVAQGYAVVIQDTRGRGASEGEFDLLGSDEAADGYDLVDWIAKQPWCDGNVGMLGVSYLAVTQLLAAV-----LQPPA 121 (550)
T ss_pred HHHHhCCcEEEEEeccccccCCCceEecCcccchHHHHHHHHHHhCCCCCCcEEEEEeChHHHHHHHHhc-----cCCCc
Confidence 45678899999999999999976432111445566666665542 12589999999999999 7777 555
Q ss_pred -ceEEEEeecc
Q 044659 76 -AGVALVVLVI 85 (169)
Q Consensus 76 -~~~~~~~~~~ 85 (169)
++++..++..
T Consensus 122 l~aiv~~~~~~ 132 (550)
T TIGR00976 122 LRAIAPQEGVW 132 (550)
T ss_pred eeEEeecCccc
Confidence 4444444443
No 91
>PRK10162 acetyl esterase; Provisional
Probab=99.08 E-value=3.6e-09 Score=79.40 Aligned_cols=157 Identities=12% Similarity=0.018 Sum_probs=84.8
Q ss_pred hcCcEEEEeCCCCCCCCCCCCCCChhhHHHHHHHHH---HhcCCC-CceEEEEEcchHHHH-HHhhccccCC----Ccce
Q 044659 7 ELGVYVLTFDRTGYGESDPKPKRPVKIEAFDIQELA---NQLNLG-HKFDVIGISILTYLF-GLVSNAHHTG----IPAG 77 (169)
Q Consensus 7 ~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~---~~~~~~-~~~~l~G~S~Gg~ia-~~~~~~~~~~----~p~~ 77 (169)
+.|+.|+++|+|...+..- ...++++.+-+..+. +.++.+ ++++|+|+|+||.++ .++...+... .+.+
T Consensus 110 ~~g~~Vv~vdYrlape~~~--p~~~~D~~~a~~~l~~~~~~~~~d~~~i~l~G~SaGG~la~~~a~~~~~~~~~~~~~~~ 187 (318)
T PRK10162 110 YSGCTVIGIDYTLSPEARF--PQAIEEIVAVCCYFHQHAEDYGINMSRIGFAGDSAGAMLALASALWLRDKQIDCGKVAG 187 (318)
T ss_pred HcCCEEEEecCCCCCCCCC--CCcHHHHHHHHHHHHHhHHHhCCChhHEEEEEECHHHHHHHHHHHHHHhcCCCccChhh
Confidence 4699999999997543311 112555554444443 345542 689999999999999 5554211111 1266
Q ss_pred EEEEeecchhhh----hhhcccchhHHHH-HHHHHhcCCCCCchhhhcc--------CCCCCCceEEEEeCCCCcchH--
Q 044659 78 VALVVLVINYCI----TCRLQGAHESLHR-DIMVHLGTWEFDPMEMENQ--------FPNNEESVYLCQGHKDKLVPF-- 142 (169)
Q Consensus 78 ~~~~~~~~~~~~----~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~--------~~~~~~P~l~~~g~~D~~v~~-- 142 (169)
+++++|...... ..+... ...+.. .+......+.-+......| +...-.|+++++|+.|++.+.
T Consensus 188 ~vl~~p~~~~~~~~s~~~~~~~-~~~l~~~~~~~~~~~y~~~~~~~~~p~~~p~~~~l~~~lPp~~i~~g~~D~L~de~~ 266 (318)
T PRK10162 188 VLLWYGLYGLRDSVSRRLLGGV-WDGLTQQDLQMYEEAYLSNDADRESPYYCLFNNDLTRDVPPCFIAGAEFDPLLDDSR 266 (318)
T ss_pred eEEECCccCCCCChhHHHhCCC-ccccCHHHHHHHHHHhCCCccccCCcccCcchhhhhcCCCCeEEEecCCCcCcChHH
Confidence 777777554210 000000 000100 0100000000000000001 112235899999999999877
Q ss_pred --HHHHHHhCCCcEEEEecCCCceee
Q 044659 143 --HRYRAKKLPRIRYHEGSAGGHLMI 166 (169)
Q Consensus 143 --~~~~~~~~~~~~~~~~~~~gH~~~ 166 (169)
.+.+.+.--..+++++++..|.+.
T Consensus 267 ~~~~~L~~aGv~v~~~~~~g~~H~f~ 292 (318)
T PRK10162 267 LLYQTLAAHQQPCEFKLYPGTLHAFL 292 (318)
T ss_pred HHHHHHHHcCCCEEEEEECCCceehh
Confidence 455555555689999999999764
No 92
>PF09752 DUF2048: Uncharacterized conserved protein (DUF2048); InterPro: IPR019149 This family of proteins has no known function.
Probab=99.07 E-value=4.2e-09 Score=78.44 Aligned_cols=156 Identities=16% Similarity=0.122 Sum_probs=89.8
Q ss_pred hhhhhhcCcEEEEeCCCCCCCCCCCCCC-C----hhhH----------HHHHHHHHHhcCCCCceEEEEEcchHHHH-HH
Q 044659 2 QDFMDELGVYVLTFDRTGYGESDPKPKR-P----VKIE----------AFDIQELANQLNLGHKFDVIGISILTYLF-GL 65 (169)
Q Consensus 2 ~~~l~~~g~~v~~~d~~G~G~s~~~~~~-~----~~~~----------~~~~~~~~~~~~~~~~~~l~G~S~Gg~ia-~~ 65 (169)
+.-|.+.|+..+.+..|=||...+.... + +.|. +.-+..++++.+. .++.+.|.||||.+| ++
T Consensus 114 a~pLl~~gi~s~~le~Pyyg~RkP~~Q~~s~l~~VsDl~~~g~~~i~E~~~Ll~Wl~~~G~-~~~g~~G~SmGG~~A~la 192 (348)
T PF09752_consen 114 ARPLLKEGIASLILENPYYGQRKPKDQRRSSLRNVSDLFVMGRATILESRALLHWLEREGY-GPLGLTGISMGGHMAALA 192 (348)
T ss_pred hhHHHHcCcceEEEecccccccChhHhhcccccchhHHHHHHhHHHHHHHHHHHHHHhcCC-CceEEEEechhHhhHHhh
Confidence 4455666999999999999987654321 1 2221 1122334455577 699999999999999 88
Q ss_pred hhccccCCCc---ceEEEEeecchh------------hhhhhcc----cchhHHH---------------------HHHH
Q 044659 66 VSNAHHTGIP---AGVALVVLVINY------------CITCRLQ----GAHESLH---------------------RDIM 105 (169)
Q Consensus 66 ~~~~~~~~~p---~~~~~~~~~~~~------------~~~~~~~----~~~~~~~---------------------~~~~ 105 (169)
++ ..| ..+.++++.... .|+.+.. ..+.... ++..
T Consensus 193 a~-----~~p~pv~~vp~ls~~sAs~vFt~Gvls~~i~W~~L~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ea~ 267 (348)
T PF09752_consen 193 AS-----NWPRPVALVPCLSWSSASVVFTEGVLSNSINWDALEKQFEDTVYEEEISDIPAQNKSLPLDSMEERRRDREAL 267 (348)
T ss_pred hh-----cCCCceeEEEeecccCCCcchhhhhhhcCCCHHHHHHHhcccchhhhhcccccCcccccchhhccccchHHHH
Confidence 88 666 333333433221 1211111 1000000 0000
Q ss_pred H-Hhc--CCCCCchhhhccCCCCCCceEEEEeCCCCcchH--HHHHHHhCCCcEEEEecCCCceee
Q 044659 106 V-HLG--TWEFDPMEMENQFPNNEESVYLCQGHKDKLVPF--HRYRAKKLPRIRYHEGSAGGHLMI 166 (169)
Q Consensus 106 ~-~~~--~~~~~~~~~~~~~~~~~~P~l~~~g~~D~~v~~--~~~~~~~~~~~~~~~~~~~gH~~~ 166 (169)
. ... +.-.....+ +.+...-.+++|.+++|.+||. ...+.+..|++++.++++ ||+..
T Consensus 268 ~~m~~~md~~T~l~nf--~~P~dp~~ii~V~A~~DaYVPr~~v~~Lq~~WPGsEvR~l~g-GHVsA 330 (348)
T PF09752_consen 268 RFMRGVMDSFTHLTNF--PVPVDPSAIIFVAAKNDAYVPRHGVLSLQEIWPGSEVRYLPG-GHVSA 330 (348)
T ss_pred HHHHHHHHhhcccccc--CCCCCCCcEEEEEecCceEechhhcchHHHhCCCCeEEEecC-CcEEE
Confidence 0 000 000000000 1112333588899999999999 779999999999999988 99854
No 93
>COG0412 Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.07 E-value=4.2e-09 Score=75.73 Aligned_cols=131 Identities=17% Similarity=0.076 Sum_probs=86.1
Q ss_pred hhhhhhcCcEEEEeCCCCCCCC-CCCCC------------CChhhHHHHHHHHHHhcC-----CCCceEEEEEcchHHHH
Q 044659 2 QDFMDELGVYVLTFDRTGYGES-DPKPK------------RPVKIEAFDIQELANQLN-----LGHKFDVIGISILTYLF 63 (169)
Q Consensus 2 ~~~l~~~g~~v~~~d~~G~G~s-~~~~~------------~~~~~~~~~~~~~~~~~~-----~~~~~~l~G~S~Gg~ia 63 (169)
.+.|++.||.|++||+-+.... ..... ....+...|+...++.+. ..++|.++|+||||.++
T Consensus 47 a~rlA~~Gy~v~~Pdl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~a~~~~L~~~~~~~~~~ig~~GfC~GG~~a 126 (236)
T COG0412 47 ARRLAKAGYVVLAPDLYGRQGDPTDIEDEPAELETGLVERVDPAEVLADIDAALDYLARQPQVDPKRIGVVGFCMGGGLA 126 (236)
T ss_pred HHHHHhCCcEEEechhhccCCCCCcccccHHHHhhhhhccCCHHHHHHHHHHHHHHHHhCCCCCCceEEEEEEcccHHHH
Confidence 4678899999999999884332 21110 012456667766666553 12679999999999999
Q ss_pred -HHhhccccCCCc--ceEEEEeecchhhhhhhcccchhHHHHHHHHHhcCCCCCchhhhccCCCCCCceEEEEeCCCCcc
Q 044659 64 -GLVSNAHHTGIP--AGVALVVLVINYCITCRLQGAHESLHRDIMVHLGTWEFDPMEMENQFPNNEESVYLCQGHKDKLV 140 (169)
Q Consensus 64 -~~~~~~~~~~~p--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~g~~D~~v 140 (169)
.++. ..| ++.+...+.... ..... ..++++|+++..|+.|..+
T Consensus 127 ~~~a~-----~~~~v~a~v~fyg~~~~----------------------~~~~~-------~~~~~~pvl~~~~~~D~~~ 172 (236)
T COG0412 127 LLAAT-----RAPEVKAAVAFYGGLIA----------------------DDTAD-------APKIKVPVLLHLAGEDPYI 172 (236)
T ss_pred HHhhc-----ccCCccEEEEecCCCCC----------------------Ccccc-------cccccCcEEEEecccCCCC
Confidence 8887 665 454444432211 00000 3456667999999999999
Q ss_pred hH--HHHHHHhC----CCcEEEEecCCCceee
Q 044659 141 PF--HRYRAKKL----PRIRYHEGSAGGHLMI 166 (169)
Q Consensus 141 ~~--~~~~~~~~----~~~~~~~~~~~gH~~~ 166 (169)
|. .+.+.+.+ ...++.+++++.|.++
T Consensus 173 p~~~~~~~~~~~~~~~~~~~~~~y~ga~H~F~ 204 (236)
T COG0412 173 PAADVDALAAALEDAGVKVDLEIYPGAGHGFA 204 (236)
T ss_pred ChhHHHHHHHHHHhcCCCeeEEEeCCCccccc
Confidence 99 33333332 3578899999889876
No 94
>COG3243 PhaC Poly(3-hydroxyalkanoate) synthetase [Lipid metabolism]
Probab=99.04 E-value=3.4e-09 Score=80.24 Aligned_cols=63 Identities=13% Similarity=0.140 Sum_probs=46.2
Q ss_pred hhhhhhcCcEEEEeCCCCCCCCCCCCCCChhhHH-----HHHHHHHHhcCCCCceEEEEEcchHHHH-HHhh
Q 044659 2 QDFMDELGVYVLTFDRTGYGESDPKPKRPVKIEA-----FDIQELANQLNLGHKFDVIGISILTYLF-GLVS 67 (169)
Q Consensus 2 ~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~l~G~S~Gg~ia-~~~~ 67 (169)
..+|.++|+.|+.+|+++=..+.. ..+++++. ..++.+.+..+. ++|.++|++.||.+. .+++
T Consensus 132 V~~l~~~g~~vfvIsw~nPd~~~~--~~~~edYi~e~l~~aid~v~~itg~-~~InliGyCvGGtl~~~ala 200 (445)
T COG3243 132 VRWLLEQGLDVFVISWRNPDASLA--AKNLEDYILEGLSEAIDTVKDITGQ-KDINLIGYCVGGTLLAAALA 200 (445)
T ss_pred HHHHHHcCCceEEEeccCchHhhh--hccHHHHHHHHHHHHHHHHHHHhCc-cccceeeEecchHHHHHHHH
Confidence 457889999999999997655543 23344444 344555566666 799999999999999 7666
No 95
>COG2021 MET2 Homoserine acetyltransferase [Amino acid transport and metabolism]
Probab=99.00 E-value=1.2e-08 Score=76.30 Aligned_cols=71 Identities=17% Similarity=0.135 Sum_probs=52.7
Q ss_pred hhcCcEEEEeCCCCCC-CCCCC----CC----------CChhhHHHHHHHHHHhcCCCCceE-EEEEcchHHHH-HHhhc
Q 044659 6 DELGVYVLTFDRTGYG-ESDPK----PK----------RPVKIEAFDIQELANQLNLGHKFD-VIGISILTYLF-GLVSN 68 (169)
Q Consensus 6 ~~~g~~v~~~d~~G~G-~s~~~----~~----------~~~~~~~~~~~~~~~~~~~~~~~~-l~G~S~Gg~ia-~~~~~ 68 (169)
.-..|.||+.+-.|.. .|+.+ +. .++.|++..-+.+++++++ +++. +||.||||+-+ ..+.
T Consensus 89 Dt~r~fvIc~NvlG~c~GStgP~s~~p~g~~yg~~FP~~ti~D~V~aq~~ll~~LGI-~~l~avvGgSmGGMqaleWa~- 166 (368)
T COG2021 89 DTERFFVICTNVLGGCKGSTGPSSINPGGKPYGSDFPVITIRDMVRAQRLLLDALGI-KKLAAVVGGSMGGMQALEWAI- 166 (368)
T ss_pred CccceEEEEecCCCCCCCCCCCCCcCCCCCccccCCCcccHHHHHHHHHHHHHhcCc-ceEeeeeccChHHHHHHHHHH-
Confidence 3345999999999976 34322 12 2377887766788999999 6775 99999999999 8888
Q ss_pred cccCCCc---ceEEEEe
Q 044659 69 AHHTGIP---AGVALVV 82 (169)
Q Consensus 69 ~~~~~~p---~~~~~~~ 82 (169)
.+| .+++.++
T Consensus 167 ----~yPd~V~~~i~ia 179 (368)
T COG2021 167 ----RYPDRVRRAIPIA 179 (368)
T ss_pred ----hChHHHhhhheec
Confidence 888 4455454
No 96
>COG3571 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=98.95 E-value=3.6e-08 Score=65.59 Aligned_cols=135 Identities=13% Similarity=0.057 Sum_probs=90.8
Q ss_pred hhhhhhcCcEEEEeCCCCCCCC-----CCC-CCCC-hhhHHHHHHHHHHhcCCCCceEEEEEcchHHHH-HHhhccccCC
Q 044659 2 QDFMDELGVYVLTFDRTGYGES-----DPK-PKRP-VKIEAFDIQELANQLNLGHKFDVIGISILTYLF-GLVSNAHHTG 73 (169)
Q Consensus 2 ~~~l~~~g~~v~~~d~~G~G~s-----~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~ia-~~~~~~~~~~ 73 (169)
+..|+..|+.|.-|+++-.-.. .++ ...+ ..++...+.++...+.- .+.++-|+||||.++ +.+. .
T Consensus 36 a~~la~~G~~vaRfefpYma~Rrtg~rkPp~~~~t~~~~~~~~~aql~~~l~~-gpLi~GGkSmGGR~aSmvad-----e 109 (213)
T COG3571 36 AAALARRGWLVARFEFPYMAARRTGRRKPPPGSGTLNPEYIVAIAQLRAGLAE-GPLIIGGKSMGGRVASMVAD-----E 109 (213)
T ss_pred HHHHHhCceeEEEeecchhhhccccCCCCcCccccCCHHHHHHHHHHHhcccC-CceeeccccccchHHHHHHH-----h
Confidence 3567788999999998754322 222 2223 56677777888888866 689999999999999 6666 3
Q ss_pred Cc---ceEEEEeecchhhhhhhcccchhHHHHHHHHHhcCCCCCchhhhccCCCCCCceEEEEeCCCCcchH-HHHHHHh
Q 044659 74 IP---AGVALVVLVINYCITCRLQGAHESLHRDIMVHLGTWEFDPMEMENQFPNNEESVYLCQGHKDKLVPF-HRYRAKK 149 (169)
Q Consensus 74 ~p---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~g~~D~~v~~-~~~~~~~ 149 (169)
.- .++++++ +++ ...++.+. .-...+..++.|++|++|+.|++-.. .-.-+..
T Consensus 110 ~~A~i~~L~clg--YPf----hppGKPe~-----------------~Rt~HL~gl~tPtli~qGtrD~fGtr~~Va~y~l 166 (213)
T COG3571 110 LQAPIDGLVCLG--YPF----HPPGKPEQ-----------------LRTEHLTGLKTPTLITQGTRDEFGTRDEVAGYAL 166 (213)
T ss_pred hcCCcceEEEec--Ccc----CCCCCccc-----------------chhhhccCCCCCeEEeecccccccCHHHHHhhhc
Confidence 33 4444442 221 11122221 11234667888899999999999888 4444555
Q ss_pred CCCcEEEEecCCCcee
Q 044659 150 LPRIRYHEGSAGGHLM 165 (169)
Q Consensus 150 ~~~~~~~~~~~~gH~~ 165 (169)
.+.+++++++++.|-+
T Consensus 167 s~~iev~wl~~adHDL 182 (213)
T COG3571 167 SDPIEVVWLEDADHDL 182 (213)
T ss_pred CCceEEEEeccCcccc
Confidence 6689999999999964
No 97
>PF03583 LIP: Secretory lipase ; InterPro: IPR005152 This entry represents a family of secreted lipases. Family members include the LIP lipases from Candida albicans, which are expressed and secreted during the infection cycle of these pathogens [].; GO: 0004806 triglyceride lipase activity, 0016042 lipid catabolic process
Probab=98.95 E-value=1.3e-08 Score=75.35 Aligned_cols=42 Identities=26% Similarity=0.339 Sum_probs=34.6
Q ss_pred CCCCceEEEEeCCCCcchH------HHHHHHhC-CCcEEEEecCCCcee
Q 044659 124 NNEESVYLCQGHKDKLVPF------HRYRAKKL-PRIRYHEGSAGGHLM 165 (169)
Q Consensus 124 ~~~~P~l~~~g~~D~~v~~------~~~~~~~~-~~~~~~~~~~~gH~~ 165 (169)
..+.|+++.+|..|.++|. .+++++.- .+++++.+++.+|..
T Consensus 217 ~P~~Pv~i~~g~~D~vvP~~~~~~l~~~~c~~G~a~V~~~~~~~~~H~~ 265 (290)
T PF03583_consen 217 TPTVPVLIYQGTADEVVPPADTDALVAKWCAAGGADVEYVRYPGGGHLG 265 (290)
T ss_pred CCCCCEEEEecCCCCCCChHHHHHHHHHHHHcCCCCEEEEecCCCChhh
Confidence 4689999999999999999 44555555 578999999999974
No 98
>cd00707 Pancreat_lipase_like Pancreatic lipase-like enzymes. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=98.94 E-value=1.2e-09 Score=80.39 Aligned_cols=77 Identities=9% Similarity=0.036 Sum_probs=51.7
Q ss_pred hhhcCcEEEEeCCCCCCCCCCCC-CCChhhHHHHHHHHHHhc------CCCCceEEEEEcchHHHH-HHhhccccCCCc-
Q 044659 5 MDELGVYVLTFDRTGYGESDPKP-KRPVKIEAFDIQELANQL------NLGHKFDVIGISILTYLF-GLVSNAHHTGIP- 75 (169)
Q Consensus 5 l~~~g~~v~~~d~~G~G~s~~~~-~~~~~~~~~~~~~~~~~~------~~~~~~~l~G~S~Gg~ia-~~~~~~~~~~~p- 75 (169)
+.+.+|+|+++|+++++.+.... ..+.....+++.++++.+ +. ++++++||||||.++ .++. .+|
T Consensus 62 l~~~~~nVi~vD~~~~~~~~y~~a~~~~~~v~~~la~~l~~L~~~~g~~~-~~i~lIGhSlGa~vAg~~a~-----~~~~ 135 (275)
T cd00707 62 LSRGDYNVIVVDWGRGANPNYPQAVNNTRVVGAELAKFLDFLVDNTGLSL-ENVHLIGHSLGAHVAGFAGK-----RLNG 135 (275)
T ss_pred HhcCCCEEEEEECccccccChHHHHHhHHHHHHHHHHHHHHHHHhcCCCh-HHEEEEEecHHHHHHHHHHH-----HhcC
Confidence 44568999999999984332111 112444445555554443 34 689999999999999 7777 666
Q ss_pred --ceEEEEeecchh
Q 044659 76 --AGVALVVLVINY 87 (169)
Q Consensus 76 --~~~~~~~~~~~~ 87 (169)
.+++.+.|+.+.
T Consensus 136 ~v~~iv~LDPa~p~ 149 (275)
T cd00707 136 KLGRITGLDPAGPL 149 (275)
T ss_pred ccceeEEecCCccc
Confidence 778888777664
No 99
>PF05448 AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR008391 This family consists of several bacterial acetyl xylan esterase proteins. Acetyl xylan esterases are enzymes that hydrolyse the ester linkages of the acetyl groups in position 2 and/or 3 of the xylose moieties of natural acetylated xylan from hardwood. These enzymes are one of the accessory enzymes which are part of the xylanolytic system, together with xylanases, beta-xylosidases, alpha-arabinofuranosidases and methylglucuronidases; these are all required for the complete hydrolysis of xylan [].; PDB: 1VLQ_H 3M81_E 3M82_D 3M83_C 3FCY_A 1ODS_F 1ODT_C 1L7A_A 3FYT_A 2XLB_F ....
Probab=98.94 E-value=6.5e-09 Score=77.90 Aligned_cols=153 Identities=20% Similarity=0.152 Sum_probs=78.7
Q ss_pred hhhcCcEEEEeCCCCCCCCCCCC--------------------CCC-hhhHHHHHHHHHHh---cC-C-CCceEEEEEcc
Q 044659 5 MDELGVYVLTFDRTGYGESDPKP--------------------KRP-VKIEAFDIQELANQ---LN-L-GHKFDVIGISI 58 (169)
Q Consensus 5 l~~~g~~v~~~d~~G~G~s~~~~--------------------~~~-~~~~~~~~~~~~~~---~~-~-~~~~~l~G~S~ 58 (169)
++..||.|+++|.+|.|...... ... ......|....++. +. + +++|.+.|.|+
T Consensus 105 ~a~~G~~vl~~d~rGqg~~~~d~~~~~~~~~~g~~~~g~~~~~e~~yyr~~~~D~~ravd~l~slpevD~~rI~v~G~Sq 184 (320)
T PF05448_consen 105 WAAAGYAVLAMDVRGQGGRSPDYRGSSGGTLKGHITRGIDDNPEDYYYRRVYLDAVRAVDFLRSLPEVDGKRIGVTGGSQ 184 (320)
T ss_dssp HHHTT-EEEEE--TTTSSSS-B-SSBSSS-SSSSTTTTTTS-TTT-HHHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETH
T ss_pred cccCCeEEEEecCCCCCCCCCCccccCCCCCccHHhcCccCchHHHHHHHHHHHHHHHHHHHHhCCCcCcceEEEEeecC
Confidence 46789999999999999322100 000 22233344333332 22 2 26899999999
Q ss_pred hHHHH-HHhhccccCCCc--ceEEEEeecchhhh---hhhc-ccchhHHHHHHH----------HHhcCC-CCCchhhhc
Q 044659 59 LTYLF-GLVSNAHHTGIP--AGVALVVLVINYCI---TCRL-QGAHESLHRDIM----------VHLGTW-EFDPMEMEN 120 (169)
Q Consensus 59 Gg~ia-~~~~~~~~~~~p--~~~~~~~~~~~~~~---~~~~-~~~~~~~~~~~~----------~~~~~~-~~~~~~~~~ 120 (169)
||.++ .+++ ..+ ++++...|...-.. +... ......+.+-.. .....+ -++.. +
T Consensus 185 GG~lal~~aa-----Ld~rv~~~~~~vP~l~d~~~~~~~~~~~~~y~~~~~~~~~~d~~~~~~~~v~~~L~Y~D~~---n 256 (320)
T PF05448_consen 185 GGGLALAAAA-----LDPRVKAAAADVPFLCDFRRALELRADEGPYPEIRRYFRWRDPHHEREPEVFETLSYFDAV---N 256 (320)
T ss_dssp HHHHHHHHHH-----HSST-SEEEEESESSSSHHHHHHHT--STTTHHHHHHHHHHSCTHCHHHHHHHHHHTT-HH---H
T ss_pred chHHHHHHHH-----hCccccEEEecCCCccchhhhhhcCCccccHHHHHHHHhccCCCcccHHHHHHHHhhhhHH---H
Confidence 99999 7776 656 55666666443211 1111 111111111111 000000 12222 2
Q ss_pred cCCCCCCceEEEEeCCCCcchH--HHHHHHhCC-CcEEEEecCCCcee
Q 044659 121 QFPNNEESVYLCQGHKDKLVPF--HRYRAKKLP-RIRYHEGSAGGHLM 165 (169)
Q Consensus 121 ~~~~~~~P~l~~~g~~D~~v~~--~~~~~~~~~-~~~~~~~~~~gH~~ 165 (169)
--..+++|+++-.|-.|+++|+ +-..+..++ ..++.++|..||-.
T Consensus 257 fA~ri~~pvl~~~gl~D~~cPP~t~fA~yN~i~~~K~l~vyp~~~He~ 304 (320)
T PF05448_consen 257 FARRIKCPVLFSVGLQDPVCPPSTQFAAYNAIPGPKELVVYPEYGHEY 304 (320)
T ss_dssp HGGG--SEEEEEEETT-SSS-HHHHHHHHCC--SSEEEEEETT--SST
T ss_pred HHHHcCCCEEEEEecCCCCCCchhHHHHHhccCCCeeEEeccCcCCCc
Confidence 2234788899999999999999 777777776 58899999999964
No 100
>PRK10115 protease 2; Provisional
Probab=98.91 E-value=3.8e-08 Score=80.83 Aligned_cols=154 Identities=16% Similarity=0.019 Sum_probs=90.2
Q ss_pred hhhhcCcEEEEeCCCCCCCCCC---------CCCCChhhHHHHHHHHHHhcCC-CCceEEEEEcchHHHH-HHhhccccC
Q 044659 4 FMDELGVYVLTFDRTGYGESDP---------KPKRPVKIEAFDIQELANQLNL-GHKFDVIGISILTYLF-GLVSNAHHT 72 (169)
Q Consensus 4 ~l~~~g~~v~~~d~~G~G~s~~---------~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~G~S~Gg~ia-~~~~~~~~~ 72 (169)
.|.++||.|+.++.||-|+-.. ....+++|+.+-++.++++--. .+++.+.|.|.||+++ +++.
T Consensus 469 ~l~~rG~~v~~~n~RGs~g~G~~w~~~g~~~~k~~~~~D~~a~~~~Lv~~g~~d~~rl~i~G~S~GG~l~~~~~~----- 543 (686)
T PRK10115 469 SLLDRGFVYAIVHVRGGGELGQQWYEDGKFLKKKNTFNDYLDACDALLKLGYGSPSLCYGMGGSAGGMLMGVAIN----- 543 (686)
T ss_pred HHHHCCcEEEEEEcCCCCccCHHHHHhhhhhcCCCcHHHHHHHHHHHHHcCCCChHHeEEEEECHHHHHHHHHHh-----
Confidence 4677899999999999765431 1123366666666666544211 2789999999999999 7877
Q ss_pred CCc---ceEEEEeecchhhhhhhcccchhHHHHHHHHHhc-CCCCC-chhh--hcc---CCCCCCc-eEEEEeCCCCcch
Q 044659 73 GIP---AGVALVVLVINYCITCRLQGAHESLHRDIMVHLG-TWEFD-PMEM--ENQ---FPNNEES-VYLCQGHKDKLVP 141 (169)
Q Consensus 73 ~~p---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~--~~~---~~~~~~P-~l~~~g~~D~~v~ 141 (169)
..| .+++...|+.+......... ........ ...+ .+... ...+ ..| ..+++.| +|+++|++|.-||
T Consensus 544 ~~Pdlf~A~v~~vp~~D~~~~~~~~~-~p~~~~~~-~e~G~p~~~~~~~~l~~~SP~~~v~~~~~P~lLi~~g~~D~RV~ 621 (686)
T PRK10115 544 QRPELFHGVIAQVPFVDVVTTMLDES-IPLTTGEF-EEWGNPQDPQYYEYMKSYSPYDNVTAQAYPHLLVTTGLHDSQVQ 621 (686)
T ss_pred cChhheeEEEecCCchhHhhhcccCC-CCCChhHH-HHhCCCCCHHHHHHHHHcCchhccCccCCCceeEEecCCCCCcC
Confidence 777 66666677666421111011 00001111 1112 11100 0011 122 2346778 5667999999999
Q ss_pred H--HHHHHHhC----CCcEEEEe---cCCCce
Q 044659 142 F--HRYRAKKL----PRIRYHEG---SAGGHL 164 (169)
Q Consensus 142 ~--~~~~~~~~----~~~~~~~~---~~~gH~ 164 (169)
+ ..++...+ ...+++.+ +++||.
T Consensus 622 ~~~~~k~~a~Lr~~~~~~~~vl~~~~~~~GHg 653 (686)
T PRK10115 622 YWEPAKWVAKLRELKTDDHLLLLCTDMDSGHG 653 (686)
T ss_pred chHHHHHHHHHHhcCCCCceEEEEecCCCCCC
Confidence 9 55554444 34566777 899997
No 101
>PF02129 Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 family); InterPro: IPR000383 This entry represents a domain found peptidases Xaa-Pro dipeptidyl-peptidase and glutaryl-7-aminocephalosporanic-acid acylase, which belong to MEROPS peptidase families S15 and S45 respectively []. It is also found in hydrolases from the CocE/NonD family. Cocaine esterase (CocE) hydrolyzes cocaine endowing the bacteria with the ability to utilise cocaine as a sole source of carbon and energy []. ; GO: 0004177 aminopeptidase activity, 0006508 proteolysis; PDB: 1LNS_A 3PUI_A 3PUH_B 1JU3_A 3I2I_A 3I2G_A 1JU4_A 3I2K_A 3IDA_A 3I2H_A ....
Probab=98.90 E-value=1.7e-08 Score=74.13 Aligned_cols=63 Identities=22% Similarity=0.137 Sum_probs=42.1
Q ss_pred hhhcCcEEEEeCCCCCCCCCCCCCCChhhHHHHHHHHH---HhcCCC-CceEEEEEcchHHHH-HHhh
Q 044659 5 MDELGVYVLTFDRTGYGESDPKPKRPVKIEAFDIQELA---NQLNLG-HKFDVIGISILTYLF-GLVS 67 (169)
Q Consensus 5 l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~---~~~~~~-~~~~l~G~S~Gg~ia-~~~~ 67 (169)
+.++||.|+..|.||.|.|+...........+|..+++ .+...+ .+|.++|.|++|..+ .++.
T Consensus 53 ~~~~GY~vV~~D~RG~g~S~G~~~~~~~~e~~D~~d~I~W~~~Qpws~G~VGm~G~SY~G~~q~~~A~ 120 (272)
T PF02129_consen 53 FAERGYAVVVQDVRGTGGSEGEFDPMSPNEAQDGYDTIEWIAAQPWSNGKVGMYGISYGGFTQWAAAA 120 (272)
T ss_dssp HHHTT-EEEEEE-TTSTTS-S-B-TTSHHHHHHHHHHHHHHHHCTTEEEEEEEEEETHHHHHHHHHHT
T ss_pred HHhCCCEEEEECCcccccCCCccccCChhHHHHHHHHHHHHHhCCCCCCeEEeeccCHHHHHHHHHHh
Confidence 78899999999999999998765542333444433333 333432 589999999999999 6666
No 102
>TIGR01849 PHB_depoly_PhaZ polyhydroxyalkanoate depolymerase, intracellular. This model represents an intracellular depolymerase for polyhydroxyalkanoate (PHA), a carbon and energy storing polyester that accumulates in granules in many bacterial species when carbon sources are abundant but other nutrients are limiting. This family is named for PHAs generally, rather than polyhydroxybutyrate (PHB) specificially as in Ralstonia eutropha H16, to avoid overcalling chemical specificity in other species. Note that this family lacks the classic GXSXG lipase motif and instead shows weak similarity to some
Probab=98.86 E-value=2.7e-08 Score=76.35 Aligned_cols=78 Identities=13% Similarity=-0.038 Sum_probs=54.5
Q ss_pred hhhhhcCcEEEEeCCCCCCCCCC-CCCCChhhHHHHHHHHHHhcCCCCceEEEEEcchHHHH-HHhhccccCCC---cce
Q 044659 3 DFMDELGVYVLTFDRTGYGESDP-KPKRPVKIEAFDIQELANQLNLGHKFDVIGISILTYLF-GLVSNAHHTGI---PAG 77 (169)
Q Consensus 3 ~~l~~~g~~v~~~d~~G~G~s~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~ia-~~~~~~~~~~~---p~~ 77 (169)
+.|.+ |+.|+..||.--+..+. ....+++++.+-+.+++++++. + ++++|.++||..+ .+++-...... |++
T Consensus 124 ~~Ll~-g~dVYl~DW~~p~~vp~~~~~f~ldDYi~~l~~~i~~~G~-~-v~l~GvCqgG~~~laa~Al~a~~~~p~~~~s 200 (406)
T TIGR01849 124 EALLP-DHDVYITDWVNARMVPLSAGKFDLEDYIDYLIEFIRFLGP-D-IHVIAVCQPAVPVLAAVALMAENEPPAQPRS 200 (406)
T ss_pred HHHhC-CCcEEEEeCCCCCCCchhcCCCCHHHHHHHHHHHHHHhCC-C-CcEEEEchhhHHHHHHHHHHHhcCCCCCcce
Confidence 45666 99999999986664432 2334589999888899999966 4 9999999999997 44441111121 366
Q ss_pred EEEEee
Q 044659 78 VALVVL 83 (169)
Q Consensus 78 ~~~~~~ 83 (169)
++++++
T Consensus 201 ltlm~~ 206 (406)
T TIGR01849 201 MTLMGG 206 (406)
T ss_pred EEEEec
Confidence 666654
No 103
>PF00975 Thioesterase: Thioesterase domain; InterPro: IPR001031 Thioesterase domains often occur integrated in or associated with peptide synthetases which are involved in the non-ribosomal synthesis of peptide antibiotics []. Thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates.; GO: 0016788 hydrolase activity, acting on ester bonds, 0009058 biosynthetic process; PDB: 2RON_A 2K2Q_B 3LCR_B 2HFJ_B 1MNQ_A 1MN6_B 1MNA_B 2HFK_B 2H7Y_B 2H7X_A ....
Probab=98.85 E-value=4.3e-08 Score=69.91 Aligned_cols=75 Identities=16% Similarity=0.132 Sum_probs=56.3
Q ss_pred CcEEEEeCCCCCCCCCCCCCCChhhHHHHHHHHHHhcCCCCceEEEEEcchHHHH-HHhhccccCCCc-ceEEEEeec
Q 044659 9 GVYVLTFDRTGYGESDPKPKRPVKIEAFDIQELANQLNLGHKFDVIGISILTYLF-GLVSNAHHTGIP-AGVALVVLV 84 (169)
Q Consensus 9 g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~ia-~~~~~~~~~~~p-~~~~~~~~~ 84 (169)
.+.|+.++.+|.+ .+..+..++++.++...+.+.+.....++.|+|||+||.+| ..+..++..... ..++++...
T Consensus 27 ~~~v~~i~~~~~~-~~~~~~~si~~la~~y~~~I~~~~~~gp~~L~G~S~Gg~lA~E~A~~Le~~G~~v~~l~liD~~ 103 (229)
T PF00975_consen 27 VIGVYGIEYPGRG-DDEPPPDSIEELASRYAEAIRARQPEGPYVLAGWSFGGILAFEMARQLEEAGEEVSRLILIDSP 103 (229)
T ss_dssp EEEEEEECSTTSC-TTSHEESSHHHHHHHHHHHHHHHTSSSSEEEEEETHHHHHHHHHHHHHHHTT-SESEEEEESCS
T ss_pred eEEEEEEecCCCC-CCCCCCCCHHHHHHHHHHHhhhhCCCCCeeehccCccHHHHHHHHHHHHHhhhccCceEEecCC
Confidence 3889999999998 33344466999999888877776652499999999999999 888755555444 667777643
No 104
>PF06057 VirJ: Bacterial virulence protein (VirJ); InterPro: IPR010333 This entry contains several bacterial VirJ virulence proteins. VirJ is thought to be involved in the type IV secretion system. It is thought that the substrate proteins localised to the periplasm may associate with the pilus in a manner that is mediated by VirJ, and suggest a two-step process for type IV secretion in Agrobacterium [].
Probab=98.81 E-value=1.1e-08 Score=70.23 Aligned_cols=140 Identities=16% Similarity=0.142 Sum_probs=80.4
Q ss_pred hhhhhhcCcEEEEeCCCCCCCCCCCCCCChhhHHHHHHHHHH----hcCCCCceEEEEEcchHHHH-HHhhccccCCCc-
Q 044659 2 QDFMDELGVYVLTFDRTGYGESDPKPKRPVKIEAFDIQELAN----QLNLGHKFDVIGISILTYLF-GLVSNAHHTGIP- 75 (169)
Q Consensus 2 ~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~l~G~S~Gg~ia-~~~~~~~~~~~p- 75 (169)
++.|++.|+.|+.+|-+=|=.+.+. .++.+.|+.++++ +.+. ++++|+|+|+|+-+. .... +.|
T Consensus 22 a~~l~~~G~~VvGvdsl~Yfw~~rt----P~~~a~Dl~~~i~~y~~~w~~-~~vvLiGYSFGADvlP~~~n-----rLp~ 91 (192)
T PF06057_consen 22 AEALAKQGVPVVGVDSLRYFWSERT----PEQTAADLARIIRHYRARWGR-KRVVLIGYSFGADVLPFIYN-----RLPA 91 (192)
T ss_pred HHHHHHCCCeEEEechHHHHhhhCC----HHHHHHHHHHHHHHHHHHhCC-ceEEEEeecCCchhHHHHHh-----hCCH
Confidence 5678999999999998876555434 4455555555554 4556 799999999999999 8777 777
Q ss_pred ------ceEEEEeecchhhhhhhcccchhHHHHHHHHHhcCCCCCchhhhccCCCC-CCceEEEEeCCCCcchHHHHHHH
Q 044659 76 ------AGVALVVLVINYCITCRLQGAHESLHRDIMVHLGTWEFDPMEMENQFPNN-EESVYLCQGHKDKLVPFHRYRAK 148 (169)
Q Consensus 76 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~P~l~~~g~~D~~v~~~~~~~~ 148 (169)
..+++++|......+.-..+ |. ...+. ... ........++ ..|++-++|+++.-... ..+
T Consensus 92 ~~r~~v~~v~Ll~p~~~~dFeihv~~----wl----g~~~~-~~~-~~~~pei~~l~~~~v~CiyG~~E~d~~c-p~l-- 158 (192)
T PF06057_consen 92 ALRARVAQVVLLSPSTTADFEIHVSG----WL----GMGGD-DAA-YPVIPEIAKLPPAPVQCIYGEDEDDSLC-PSL-- 158 (192)
T ss_pred HHHhheeEEEEeccCCcceEEEEhhh----hc----CCCCC-ccc-CCchHHHHhCCCCeEEEEEcCCCCCCcC-ccc--
Confidence 45555555333211100000 10 00000 000 0011111111 23699999997765332 111
Q ss_pred hCCCcEEEEecCCCcee
Q 044659 149 KLPRIRYHEGSAGGHLM 165 (169)
Q Consensus 149 ~~~~~~~~~~~~~gH~~ 165 (169)
..++++.+.+|| ||.+
T Consensus 159 ~~~~~~~i~lpG-gHHf 174 (192)
T PF06057_consen 159 RQPGVEVIALPG-GHHF 174 (192)
T ss_pred cCCCcEEEEcCC-CcCC
Confidence 125789999998 7764
No 105
>PLN02733 phosphatidylcholine-sterol O-acyltransferase
Probab=98.81 E-value=1.5e-08 Score=78.78 Aligned_cols=64 Identities=14% Similarity=0.092 Sum_probs=47.2
Q ss_pred hhhhhhcCcEEEEeCCCCCCCCCCCCCC---ChhhHHHHHHHHHHhcCCCCceEEEEEcchHHHH-HHhh
Q 044659 2 QDFMDELGVYVLTFDRTGYGESDPKPKR---PVKIEAFDIQELANQLNLGHKFDVIGISILTYLF-GLVS 67 (169)
Q Consensus 2 ~~~l~~~g~~v~~~d~~G~G~s~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~ia-~~~~ 67 (169)
.+.|.+.||.+ ..|++|+|.+.+.... ..++..+.++++.++.+. ++++|+||||||.++ .++.
T Consensus 114 i~~L~~~GY~~-~~dL~g~gYDwR~~~~~~~~~~~Lk~lIe~~~~~~g~-~kV~LVGHSMGGlva~~fl~ 181 (440)
T PLN02733 114 IEQLIKWGYKE-GKTLFGFGYDFRQSNRLPETMDGLKKKLETVYKASGG-KKVNIISHSMGGLLVKCFMS 181 (440)
T ss_pred HHHHHHcCCcc-CCCcccCCCCccccccHHHHHHHHHHHHHHHHHHcCC-CCEEEEEECHhHHHHHHHHH
Confidence 45688889765 8999999998765321 144555555555566666 799999999999999 7776
No 106
>TIGR03502 lipase_Pla1_cef extracellular lipase, Pla-1/cef family. Members of this protein family are bacterial lipoproteins largely from the Gammaproteobacteria. Characterized members are expressed in extracellularly and have esterase activity. Members include the lipase Pla-1 from Aeromonas hydrophila (AF092033) and CHO cell elongation factor (cef) from Vibrio hollisae
Probab=98.80 E-value=1.5e-08 Score=83.15 Aligned_cols=66 Identities=18% Similarity=0.270 Sum_probs=50.3
Q ss_pred hhhhhhcCcEEEEeCCCCCCCCCCC------------C------------CCChhhHHHHHHHHHHhcC-----------
Q 044659 2 QDFMDELGVYVLTFDRTGYGESDPK------------P------------KRPVKIEAFDIQELANQLN----------- 46 (169)
Q Consensus 2 ~~~l~~~g~~v~~~d~~G~G~s~~~------------~------------~~~~~~~~~~~~~~~~~~~----------- 46 (169)
.+.|.+.||+|+++|+||||.|... . ..++++.+.|+..+..+++
T Consensus 469 A~~La~~Gy~VIaiDlpGHG~S~~~~~~~~~~a~~~~~~~y~Nl~~l~~aRDn~rQ~v~Dll~L~~~l~~~~~~~~~~~~ 548 (792)
T TIGR03502 469 AGTLAAAGVATIAIDHPLHGARSFDANASGVNATNANVLAYMNLASLLVARDNLRQSILDLLGLRLSLNGSALAGAPLSG 548 (792)
T ss_pred HHHHHhCCcEEEEeCCCCCCccccccccccccccccCccceeccccccccccCHHHHHHHHHHHHHHHhccccccccccc
Confidence 3456778999999999999999332 0 0146788888887777765
Q ss_pred ---C-CCceEEEEEcchHHHH-HHhh
Q 044659 47 ---L-GHKFDVIGISILTYLF-GLVS 67 (169)
Q Consensus 47 ---~-~~~~~l~G~S~Gg~ia-~~~~ 67 (169)
. ..+++++||||||.++ .++.
T Consensus 549 ~~~~~~~~V~~lGHSLGgiig~~~~~ 574 (792)
T TIGR03502 549 INVIDGSKVSFLGHSLGGIVGTSFIA 574 (792)
T ss_pred ccCCCCCcEEEEecCHHHHHHHHHHH
Confidence 1 1589999999999999 6665
No 107
>PF08538 DUF1749: Protein of unknown function (DUF1749); InterPro: IPR013744 This is a plant and fungal family of unknown function. This family contains many hypothetical proteins. ; PDB: 2Q0X_B.
Probab=98.78 E-value=4.5e-08 Score=71.95 Aligned_cols=158 Identities=16% Similarity=0.193 Sum_probs=59.7
Q ss_pred hhhhhhcCcEEEEeCCC----CCCCCCCCCCCChhhHHHHHHHHHHhc--------CCCCceEEEEEcchHHHH-HHhhc
Q 044659 2 QDFMDELGVYVLTFDRT----GYGESDPKPKRPVKIEAFDIQELANQL--------NLGHKFDVIGISILTYLF-GLVSN 68 (169)
Q Consensus 2 ~~~l~~~g~~v~~~d~~----G~G~s~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~l~G~S~Gg~ia-~~~~~ 68 (169)
++.|.+.+|.|+-+-+. |+|.+ ++++-++||.++++.+ +. ++|+|+|||-|.+-+ .++.+
T Consensus 56 a~aL~~~~wsl~q~~LsSSy~G~G~~------SL~~D~~eI~~~v~ylr~~~~g~~~~-~kIVLmGHSTGcQdvl~Yl~~ 128 (303)
T PF08538_consen 56 AEALEETGWSLFQVQLSSSYSGWGTS------SLDRDVEEIAQLVEYLRSEKGGHFGR-EKIVLMGHSTGCQDVLHYLSS 128 (303)
T ss_dssp HHHHT-TT-EEEEE--GGGBTTS-S--------HHHHHHHHHHHHHHHHHHS-------S-EEEEEECCHHHHHHHHHHH
T ss_pred HHHhccCCeEEEEEEecCccCCcCcc------hhhhHHHHHHHHHHHHHHhhccccCC-ccEEEEecCCCcHHHHHHHhc
Confidence 44566778999988765 34422 3556666666555533 23 689999999999999 77663
Q ss_pred ccc--CCCc-ceEEEEeecchhhhhhhc--c-cchhHHH---HHHHH-----------------------HhcCC-----
Q 044659 69 AHH--TGIP-AGVALVVLVINYCITCRL--Q-GAHESLH---RDIMV-----------------------HLGTW----- 111 (169)
Q Consensus 69 ~~~--~~~p-~~~~~~~~~~~~~~~~~~--~-~~~~~~~---~~~~~-----------------------~~~~~----- 111 (169)
..+ ...+ .++++-+|+....+.... . .....+. +++.. ..+.+
T Consensus 129 ~~~~~~~~~VdG~ILQApVSDREa~~~~~~~~~~~~~~v~~A~~~i~~g~~~~~lp~~~~~~~~~~~PiTA~Rf~SL~s~ 208 (303)
T PF08538_consen 129 PNPSPSRPPVDGAILQAPVSDREAILNFLGEREAYEELVALAKELIAEGKGDEILPREFTPLVFYDTPITAYRFLSLASP 208 (303)
T ss_dssp -TT---CCCEEEEEEEEE---TTSTTTSHHH---HHHHHHHHHHHHHCT-TT-GG----GGTTT-SS---HHHHHT-S-S
T ss_pred cCccccccceEEEEEeCCCCChhHhhhcccchHHHHHHHHHHHHHHHcCCCCceeeccccccccCCCcccHHHHHhccCC
Confidence 332 1223 788888988775320000 0 0011010 00000 00000
Q ss_pred ---------CCCchhhhccCCCCCCceEEEEeCCCCcchH---HHHHHHhCCC--------cEEEEecCCCceee
Q 044659 112 ---------EFDPMEMENQFPNNEESVYLCQGHKDKLVPF---HRYRAKKLPR--------IRYHEGSAGGHLMI 166 (169)
Q Consensus 112 ---------~~~~~~~~~~~~~~~~P~l~~~g~~D~~v~~---~~~~~~~~~~--------~~~~~~~~~gH~~~ 166 (169)
....+.+...|..+++|+|++.+++|.+||. .+.+.+++.. ..--++||+.|.+-
T Consensus 209 ~gdDD~FSSDL~de~l~~tfG~v~~plLvl~Sg~DEyvP~~vdk~~Ll~rw~~a~~~~~~s~~S~iI~GA~H~~~ 283 (303)
T PF08538_consen 209 GGDDDYFSSDLSDERLKKTFGKVSKPLLVLYSGKDEYVPPWVDKEALLERWKAATNPKIWSPLSGIIPGASHNVS 283 (303)
T ss_dssp SHHHHTHHHHHTT-HHHHTGGG--S-EEEEEE--TT---------------------------------------
T ss_pred CCcccccCCCCCHHHHHHHhccCCCceEEEecCCCceeccccccccccccccccccccccccccccccccccccc
Confidence 0011222334667999999999999999999 3444444432 12458899999753
No 108
>COG0400 Predicted esterase [General function prediction only]
Probab=98.77 E-value=6.4e-08 Score=68.00 Aligned_cols=103 Identities=20% Similarity=0.221 Sum_probs=68.2
Q ss_pred hhhHHHHHHHHHHhcCCC-CceEEEEEcchHHHH-HHhhccccCCCc---ceEEEEeecchhhhhhhcccchhHHHHHHH
Q 044659 31 VKIEAFDIQELANQLNLG-HKFDVIGISILTYLF-GLVSNAHHTGIP---AGVALVVLVINYCITCRLQGAHESLHRDIM 105 (169)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~-~~~~l~G~S~Gg~ia-~~~~~~~~~~~p---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 105 (169)
.+...+-++.+.++.+++ ++++++|+|.|+.++ .... ..| .+++++++..+. ...
T Consensus 80 ~~~~~~~l~~~~~~~gi~~~~ii~~GfSqGA~ial~~~l-----~~~~~~~~ail~~g~~~~---------~~~------ 139 (207)
T COG0400 80 TEKLAEFLEELAEEYGIDSSRIILIGFSQGANIALSLGL-----TLPGLFAGAILFSGMLPL---------EPE------ 139 (207)
T ss_pred HHHHHHHHHHHHHHhCCChhheEEEecChHHHHHHHHHH-----hCchhhccchhcCCcCCC---------CCc------
Confidence 333444445555566542 789999999999999 7776 555 777777775553 000
Q ss_pred HHhcCCCCCchhhhccCCCCCCceEEEEeCCCCcchH--HHHH----HHhCCCcEEEEecCCCceeeec
Q 044659 106 VHLGTWEFDPMEMENQFPNNEESVYLCQGHKDKLVPF--HRYR----AKKLPRIRYHEGSAGGHLMIHE 168 (169)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~P~l~~~g~~D~~v~~--~~~~----~~~~~~~~~~~~~~~gH~~~~e 168 (169)
........|+++.||+.|+++|. ..++ ....-+++.++++ .||-+..|
T Consensus 140 --------------~~~~~~~~pill~hG~~Dpvvp~~~~~~l~~~l~~~g~~v~~~~~~-~GH~i~~e 193 (207)
T COG0400 140 --------------LLPDLAGTPILLSHGTEDPVVPLALAEALAEYLTASGADVEVRWHE-GGHEIPPE 193 (207)
T ss_pred --------------cccccCCCeEEEeccCcCCccCHHHHHHHHHHHHHcCCCEEEEEec-CCCcCCHH
Confidence 01112344599999999999999 3333 3333468889998 59987644
No 109
>PF12715 Abhydrolase_7: Abhydrolase family; PDB: 3NUZ_C 3G8Y_A.
Probab=98.77 E-value=1.6e-08 Score=76.16 Aligned_cols=152 Identities=18% Similarity=0.181 Sum_probs=68.1
Q ss_pred hhhhhhcCcEEEEeCCCCCCCCCCCCCC------ChhhHH---------------HHHHHHHHhcC----C-CCceEEEE
Q 044659 2 QDFMDELGVYVLTFDRTGYGESDPKPKR------PVKIEA---------------FDIQELANQLN----L-GHKFDVIG 55 (169)
Q Consensus 2 ~~~l~~~g~~v~~~d~~G~G~s~~~~~~------~~~~~~---------------~~~~~~~~~~~----~-~~~~~l~G 55 (169)
...|+++||-|+++|.+|+|++...... +....+ -|....++.+. + .++|.++|
T Consensus 153 g~~LAk~GYVvla~D~~g~GER~~~e~~~~~~~~~~~~la~~~l~lG~S~~G~~~~ddmr~lDfL~slpeVD~~RIG~~G 232 (390)
T PF12715_consen 153 GDQLAKRGYVVLAPDALGFGERGDMEGAAQGSNYDCQALARNLLMLGRSLAGLMAWDDMRALDFLASLPEVDPDRIGCMG 232 (390)
T ss_dssp HHHHHTTTSEEEEE--TTSGGG-SSCCCTTTTS--HHHHHHHHHHTT--HHHHHHHHHHHHHHHHCT-TTEEEEEEEEEE
T ss_pred HHHHHhCCCEEEEEccccccccccccccccccchhHHHHHHHHHHcCcCHHHHHHHHHHHHHHHHhcCcccCccceEEEe
Confidence 3468899999999999999987543211 011111 12223334332 1 26899999
Q ss_pred EcchHHHH-HHhhccccCCCc-ceEEEEeecchhhhhhhcc-----cc-hhHHHHHHHHHh-cCCC-CCchhhhccCCCC
Q 044659 56 ISILTYLF-GLVSNAHHTGIP-AGVALVVLVINYCITCRLQ-----GA-HESLHRDIMVHL-GTWE-FDPMEMENQFPNN 125 (169)
Q Consensus 56 ~S~Gg~ia-~~~~~~~~~~~p-~~~~~~~~~~~~~~~~~~~-----~~-~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~ 125 (169)
+||||..+ .+++ .-+ ..+.+++.......+.... .. .....+...... +.|+ ++..++.. .-.
T Consensus 233 fSmGg~~a~~LaA-----LDdRIka~v~~~~l~~~~~~~~~mt~~~~~~~~~~~~~~~~~iPgl~r~~D~PdIas--liA 305 (390)
T PF12715_consen 233 FSMGGYRAWWLAA-----LDDRIKATVANGYLCTTQERALLMTMPNNNGLRGFPNCICNYIPGLWRYFDFPDIAS--LIA 305 (390)
T ss_dssp EGGGHHHHHHHHH-----H-TT--EEEEES-B--HHHHHHHB----TTS----SS-GGG--TTCCCC--HHHHHH--TTT
T ss_pred ecccHHHHHHHHH-----cchhhHhHhhhhhhhccchhhHhhccccccccCcCcchhhhhCccHHhhCccHHHHH--HhC
Confidence 99999999 6666 545 4444444333221111100 00 000111111111 1222 22222211 112
Q ss_pred CCceEEEEeCCCCcchH---HHHHHHhCCCcEEEEecC
Q 044659 126 EESVYLCQGHKDKLVPF---HRYRAKKLPRIRYHEGSA 160 (169)
Q Consensus 126 ~~P~l~~~g~~D~~v~~---~~~~~~~~~~~~~~~~~~ 160 (169)
-.|++++.|.+|..+|. +..+...-.|.+++.+|+
T Consensus 306 PRPll~~nG~~Dklf~iV~~AY~~~~~p~n~~~~~~p~ 343 (390)
T PF12715_consen 306 PRPLLFENGGKDKLFPIVRRAYAIMGAPDNFQIHHYPK 343 (390)
T ss_dssp TS-EEESS-B-HHHHHHHHHHHHHTT-GGGEEE---GG
T ss_pred CCcchhhcCCcccccHHHHHHHHhcCCCcceEEeeccc
Confidence 35699999999999988 223333333688888875
No 110
>KOG2281 consensus Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Posttranslational modification, protein turnover, chaperones]
Probab=98.74 E-value=7.6e-08 Score=76.31 Aligned_cols=155 Identities=17% Similarity=0.074 Sum_probs=95.8
Q ss_pred hhhhcCcEEEEeCCCCCCCCCCCC--------CC-ChhhHHHHHHHHHHhcC---CCCceEEEEEcchHHHH-HHhhccc
Q 044659 4 FMDELGVYVLTFDRTGYGESDPKP--------KR-PVKIEAFDIQELANQLN---LGHKFDVIGISILTYLF-GLVSNAH 70 (169)
Q Consensus 4 ~l~~~g~~v~~~d~~G~G~s~~~~--------~~-~~~~~~~~~~~~~~~~~---~~~~~~l~G~S~Gg~ia-~~~~~~~ 70 (169)
.|+.+||-|+.+|-||.-.....- .+ .++|.++-++.++++.+ . +++.+-|+|+||+++ ..+.
T Consensus 671 ~LaslGy~Vv~IDnRGS~hRGlkFE~~ik~kmGqVE~eDQVeglq~Laeq~gfidm-drV~vhGWSYGGYLSlm~L~--- 746 (867)
T KOG2281|consen 671 RLASLGYVVVFIDNRGSAHRGLKFESHIKKKMGQVEVEDQVEGLQMLAEQTGFIDM-DRVGVHGWSYGGYLSLMGLA--- 746 (867)
T ss_pred hhhhcceEEEEEcCCCccccchhhHHHHhhccCeeeehhhHHHHHHHHHhcCcccc-hheeEeccccccHHHHHHhh---
Confidence 367789999999999976553221 11 18899999999999986 4 799999999999999 8888
Q ss_pred cCCCc-ceEEEEeecchhhhhhhcccchhHHHHHHH-HHhcCCC-CCchhhhccCCCCCCceEEEEeCCCCcchH-----
Q 044659 71 HTGIP-AGVALVVLVINYCITCRLQGAHESLHRDIM-VHLGTWE-FDPMEMENQFPNNEESVYLCQGHKDKLVPF----- 142 (169)
Q Consensus 71 ~~~~p-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~~~P~l~~~g~~D~~v~~----- 142 (169)
.+| .--+.++++.-..|..+..+-.+.+. ++. .....+. -+.......+++-....+++||--|..|..
T Consensus 747 --~~P~IfrvAIAGapVT~W~~YDTgYTERYM-g~P~~nE~gY~agSV~~~VeklpdepnRLlLvHGliDENVHF~Hts~ 823 (867)
T KOG2281|consen 747 --QYPNIFRVAIAGAPVTDWRLYDTGYTERYM-GYPDNNEHGYGAGSVAGHVEKLPDEPNRLLLVHGLIDENVHFAHTSR 823 (867)
T ss_pred --cCcceeeEEeccCcceeeeeecccchhhhc-CCCccchhcccchhHHHHHhhCCCCCceEEEEecccccchhhhhHHH
Confidence 888 33344443333323222211111000 000 0000000 011111122444444599999999999998
Q ss_pred -HHHHHHhCCCcEEEEecCCCcee
Q 044659 143 -HRYRAKKLPRIRYHEGSAGGHLM 165 (169)
Q Consensus 143 -~~~~~~~~~~~~~~~~~~~gH~~ 165 (169)
...+.+.-+.-+++++|+.-|.+
T Consensus 824 Lvs~lvkagKpyeL~IfP~ERHsi 847 (867)
T KOG2281|consen 824 LVSALVKAGKPYELQIFPNERHSI 847 (867)
T ss_pred HHHHHHhCCCceEEEEcccccccc
Confidence 34445555567899999988875
No 111
>PF05677 DUF818: Chlamydia CHLPS protein (DUF818); InterPro: IPR008536 This family of unknown function includes several Chlamydia CHLPS proteins and Legionella SidB proteins.
Probab=98.74 E-value=2.4e-07 Score=68.76 Aligned_cols=123 Identities=18% Similarity=0.143 Sum_probs=70.8
Q ss_pred hhhhhcCcEEEEeCCCCCCCCCCCCCCChhhHHHHHHHHHHhc-----CC-CCceEEEEEcchHHHH-HHhhccccCCCc
Q 044659 3 DFMDELGVYVLTFDRTGYGESDPKPKRPVKIEAFDIQELANQL-----NL-GHKFDVIGISILTYLF-GLVSNAHHTGIP 75 (169)
Q Consensus 3 ~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~-----~~-~~~~~l~G~S~Gg~ia-~~~~~~~~~~~p 75 (169)
+.+.+.+-+|+.+.+||.|.|.+.+. .++.+.+-+..++.+ +. .+.|.+.|||+||.++ .++. ...
T Consensus 165 ~~ak~~~aNvl~fNYpGVg~S~G~~s--~~dLv~~~~a~v~yL~d~~~G~ka~~Ii~yG~SLGG~Vqa~AL~-----~~~ 237 (365)
T PF05677_consen 165 RFAKELGANVLVFNYPGVGSSTGPPS--RKDLVKDYQACVRYLRDEEQGPKAKNIILYGHSLGGGVQAEALK-----KEV 237 (365)
T ss_pred HHHHHcCCcEEEECCCccccCCCCCC--HHHHHHHHHHHHHHHHhcccCCChheEEEeeccccHHHHHHHHH-----hcc
Confidence 44567799999999999999987764 355555544444433 21 1679999999999999 7766 332
Q ss_pred ------ceEEEEeecchhhhhhhcccchhHHHHHHHHHhcCCCCCchhhhccCCCCCCceEEEEeCC
Q 044659 76 ------AGVALVVLVINYCITCRLQGAHESLHRDIMVHLGTWEFDPMEMENQFPNNEESVYLCQGHK 136 (169)
Q Consensus 76 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~g~~ 136 (169)
.+.+++..-.+.............+..- ....-.|..+..+ ...+++||-+|+++.+
T Consensus 238 ~~~~dgi~~~~ikDRsfssl~~vas~~~~~~~~~-l~~l~gWnidS~K---~s~~l~cpeIii~~~d 300 (365)
T PF05677_consen 238 LKGSDGIRWFLIKDRSFSSLAAVASQFFGPIGKL-LIKLLGWNIDSAK---NSEKLQCPEIIIYGVD 300 (365)
T ss_pred cccCCCeeEEEEecCCcchHHHHHHHHHHHHHHH-HHHHhccCCCchh---hhccCCCCeEEEeccc
Confidence 3434443322210010000011111111 1112267665433 2445778899998874
No 112
>PF03959 FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 This entry represents proteins belonging to the AB hydrolase family. It consists of serine hydrolases of unknown specificity [, ] and includes uncharacterised proteins.; PDB: 1YCD_A.
Probab=98.73 E-value=6.6e-08 Score=68.52 Aligned_cols=110 Identities=15% Similarity=0.049 Sum_probs=60.1
Q ss_pred hhhHHHHHHHHHHhcCCCCceEEEEEcchHHHH-HHhhccccC----CCc--ceEEEEeecchhhhhhhcccchhHHHHH
Q 044659 31 VKIEAFDIQELANQLNLGHKFDVIGISILTYLF-GLVSNAHHT----GIP--AGVALVVLVINYCITCRLQGAHESLHRD 103 (169)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~ia-~~~~~~~~~----~~p--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 103 (169)
+++..+.+.+.++..+. -..|+|+|.||.+| .++...+.. ..| +.+|++++..+....
T Consensus 86 ~~~sl~~l~~~i~~~GP--fdGvlGFSQGA~lAa~ll~~~~~~~~~~~~~~~kf~V~~sg~~p~~~~------------- 150 (212)
T PF03959_consen 86 LDESLDYLRDYIEENGP--FDGVLGFSQGAALAALLLALQQRGRPDGAHPPFKFAVFISGFPPPDPD------------- 150 (212)
T ss_dssp -HHHHHHHHHHHHHH-----SEEEEETHHHHHHHHHHHHHHHHST--T----SEEEEES----EEE--------------
T ss_pred HHHHHHHHHHHHHhcCC--eEEEEeecHHHHHHHHHHHHHHhhcccccCCCceEEEEEcccCCCchh-------------
Confidence 55555556666666532 36799999999999 555421111 122 666777765543000
Q ss_pred HHHHhcCCCCCchhhhccCCCCCCceEEEEeCCCCcchH--HHHHHHhCCC-cEEEEecCCCceeeec
Q 044659 104 IMVHLGTWEFDPMEMENQFPNNEESVYLCQGHKDKLVPF--HRYRAKKLPR-IRYHEGSAGGHLMIHE 168 (169)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~g~~D~~v~~--~~~~~~~~~~-~~~~~~~~~gH~~~~e 168 (169)
... +. ....+++|+|-++|++|.++++ .+.+.+...+ .+++..++ ||.++..
T Consensus 151 ----~~~-------~~-~~~~i~iPtlHv~G~~D~~~~~~~s~~L~~~~~~~~~v~~h~g-GH~vP~~ 205 (212)
T PF03959_consen 151 ----YQE-------LY-DEPKISIPTLHVIGENDPVVPPERSEALAEMFDPDARVIEHDG-GHHVPRK 205 (212)
T ss_dssp ----GTT-------TT---TT---EEEEEEETT-SSS-HHHHHHHHHHHHHHEEEEEESS-SSS----
T ss_pred ----hhh-------hh-ccccCCCCeEEEEeCCCCCcchHHHHHHHHhccCCcEEEEECC-CCcCcCC
Confidence 000 00 1234577799999999999997 7888888777 88888887 9998753
No 113
>COG0657 Aes Esterase/lipase [Lipid metabolism]
Probab=98.71 E-value=5.7e-07 Score=67.30 Aligned_cols=159 Identities=14% Similarity=0.055 Sum_probs=93.0
Q ss_pred hhhhhcCcEEEEeCCCCCCCCCCCCCC-ChhhHHHHHHHHHHh---cCC-CCceEEEEEcchHHHH-HHhhccccCCCc-
Q 044659 3 DFMDELGVYVLTFDRTGYGESDPKPKR-PVKIEAFDIQELANQ---LNL-GHKFDVIGISILTYLF-GLVSNAHHTGIP- 75 (169)
Q Consensus 3 ~~l~~~g~~v~~~d~~G~G~s~~~~~~-~~~~~~~~~~~~~~~---~~~-~~~~~l~G~S~Gg~ia-~~~~~~~~~~~p- 75 (169)
..+...|+.|+.+|+|---+- +.. .+.+..+-+..+.++ ++. .++|.++|+|.||.++ .++...+....|
T Consensus 104 ~~~~~~g~~vv~vdYrlaPe~---~~p~~~~d~~~a~~~l~~~~~~~g~dp~~i~v~GdSAGG~La~~~a~~~~~~~~~~ 180 (312)
T COG0657 104 RLAAAAGAVVVSVDYRLAPEH---PFPAALEDAYAAYRWLRANAAELGIDPSRIAVAGDSAGGHLALALALAARDRGLPL 180 (312)
T ss_pred HHHHHcCCEEEecCCCCCCCC---CCCchHHHHHHHHHHHHhhhHhhCCCccceEEEecCcccHHHHHHHHHHHhcCCCC
Confidence 456778999999999955333 222 266655555555554 332 2789999999999999 555533322223
Q ss_pred -ceEEEEeecchhhh-----hhhccc---chhHHHHHHHHH-hc--CCCCC--chhhhcc-CCCCCCceEEEEeCCCCcc
Q 044659 76 -AGVALVVLVINYCI-----TCRLQG---AHESLHRDIMVH-LG--TWEFD--PMEMENQ-FPNNEESVYLCQGHKDKLV 140 (169)
Q Consensus 76 -~~~~~~~~~~~~~~-----~~~~~~---~~~~~~~~~~~~-~~--~~~~~--~~~~~~~-~~~~~~P~l~~~g~~D~~v 140 (169)
...++++|...... ..+... ....+....... .. ..... ...+..+ +.. -.|+++++|+.|.+.
T Consensus 181 p~~~~li~P~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~spl~~~~~~~-lPP~~i~~a~~D~l~ 259 (312)
T COG0657 181 PAAQVLISPLLDLTSSAASLPGYGEADLLDAAAILAWFADLYLGAAPDREDPEASPLASDDLSG-LPPTLIQTAEFDPLR 259 (312)
T ss_pred ceEEEEEecccCCcccccchhhcCCccccCHHHHHHHHHHHhCcCccccCCCccCccccccccC-CCCEEEEecCCCcch
Confidence 77888888755421 000000 000011011111 11 01111 1111111 233 578999999999999
Q ss_pred hH----HHHHHHhCCCcEEEEecCCCcee
Q 044659 141 PF----HRYRAKKLPRIRYHEGSAGGHLM 165 (169)
Q Consensus 141 ~~----~~~~~~~~~~~~~~~~~~~gH~~ 165 (169)
+. .+.+.+.-...+++.+++..|.+
T Consensus 260 ~~~~~~a~~L~~agv~~~~~~~~g~~H~f 288 (312)
T COG0657 260 DEGEAYAERLRAAGVPVELRVYPGMIHGF 288 (312)
T ss_pred hHHHHHHHHHHHcCCeEEEEEeCCcceec
Confidence 97 66666666678999999999965
No 114
>COG3545 Predicted esterase of the alpha/beta hydrolase fold [General function prediction only]
Probab=98.69 E-value=1.4e-07 Score=63.69 Aligned_cols=111 Identities=14% Similarity=0.027 Sum_probs=72.3
Q ss_pred hhhHHHHHHHHHHhcCCCCceEEEEEcchHHHH-HHhhccccCCCc-ceEEEEeecchhhhhhhcccchhHHHHHHHHHh
Q 044659 31 VKIEAFDIQELANQLNLGHKFDVIGISILTYLF-GLVSNAHHTGIP-AGVALVVLVINYCITCRLQGAHESLHRDIMVHL 108 (169)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~ia-~~~~~~~~~~~p-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 108 (169)
.++|.+.+++.+++. .++++||+||+|+..+ -++.. - ..+ .++++++|.... .- .. .. .
T Consensus 43 ~~dWi~~l~~~v~a~--~~~~vlVAHSLGc~~v~h~~~~--~-~~~V~GalLVAppd~~---~~--~~---~~------~ 103 (181)
T COG3545 43 LDDWIARLEKEVNAA--EGPVVLVAHSLGCATVAHWAEH--I-QRQVAGALLVAPPDVS---RP--EI---RP------K 103 (181)
T ss_pred HHHHHHHHHHHHhcc--CCCeEEEEecccHHHHHHHHHh--h-hhccceEEEecCCCcc---cc--cc---ch------h
Confidence 788888887777777 2569999999999999 55551 1 114 888888875432 00 00 00 0
Q ss_pred cCCCCCchhhhccCCCCCCceEEEEeCCCCcchH--HHHHHHhCCCcEEEEecCCCcee
Q 044659 109 GTWEFDPMEMENQFPNNEESVYLCQGHKDKLVPF--HRYRAKKLPRIRYHEGSAGGHLM 165 (169)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~P~l~~~g~~D~~v~~--~~~~~~~~~~~~~~~~~~~gH~~ 165 (169)
....|++. |....--|.+++.+.+|+++++ ++.+++..+ ..++....+||+-
T Consensus 104 ~~~tf~~~----p~~~lpfps~vvaSrnDp~~~~~~a~~~a~~wg-s~lv~~g~~GHiN 157 (181)
T COG3545 104 HLMTFDPI----PREPLPFPSVVVASRNDPYVSYEHAEDLANAWG-SALVDVGEGGHIN 157 (181)
T ss_pred hccccCCC----ccccCCCceeEEEecCCCCCCHHHHHHHHHhcc-Hhheecccccccc
Confidence 01112211 1222333499999999999999 788887775 6777777789973
No 115
>COG3458 Acetyl esterase (deacetylase) [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.66 E-value=1.2e-07 Score=68.21 Aligned_cols=151 Identities=17% Similarity=0.087 Sum_probs=90.3
Q ss_pred hhcCcEEEEeCCCCCCCCCC----CCCC-C-----------------hhhHHHHHHHHHHhcC-----CCCceEEEEEcc
Q 044659 6 DELGVYVLTFDRTGYGESDP----KPKR-P-----------------VKIEAFDIQELANQLN-----LGHKFDVIGISI 58 (169)
Q Consensus 6 ~~~g~~v~~~d~~G~G~s~~----~~~~-~-----------------~~~~~~~~~~~~~~~~-----~~~~~~l~G~S~ 58 (169)
...||.|+.+|-||.|.|+. .+.. + +..+-.|+.++++.+- ..++|.+.|.|.
T Consensus 106 a~~Gyavf~MdvRGQg~~~~dt~~~p~~~s~pG~mtrGilD~kd~yyyr~v~~D~~~ave~~~sl~~vde~Ri~v~G~Sq 185 (321)
T COG3458 106 AVAGYAVFVMDVRGQGSSSQDTADPPGGPSDPGFMTRGILDRKDTYYYRGVFLDAVRAVEILASLDEVDEERIGVTGGSQ 185 (321)
T ss_pred cccceeEEEEecccCCCccccCCCCCCCCcCCceeEeecccCCCceEEeeehHHHHHHHHHHhccCccchhheEEecccc
Confidence 46699999999999998732 1111 0 3345556555555432 127899999999
Q ss_pred hHHHH-HHhhccccCCCc--ceEEEEeecchh---hhhhhcccchhHHHH--------HHHHHhcCCCCCchhhhccCCC
Q 044659 59 LTYLF-GLVSNAHHTGIP--AGVALVVLVINY---CITCRLQGAHESLHR--------DIMVHLGTWEFDPMEMENQFPN 124 (169)
Q Consensus 59 Gg~ia-~~~~~~~~~~~p--~~~~~~~~~~~~---~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~ 124 (169)
||.++ ++++ .-| ++++.+.|...- +++......+..+.. +...+..---| ++.+--.-
T Consensus 186 GGglalaaaa-----l~~rik~~~~~~Pfl~df~r~i~~~~~~~ydei~~y~k~h~~~e~~v~~TL~yf---D~~n~A~R 257 (321)
T COG3458 186 GGGLALAAAA-----LDPRIKAVVADYPFLSDFPRAIELATEGPYDEIQTYFKRHDPKEAEVFETLSYF---DIVNLAAR 257 (321)
T ss_pred Cchhhhhhhh-----cChhhhcccccccccccchhheeecccCcHHHHHHHHHhcCchHHHHHHHHhhh---hhhhHHHh
Confidence 99999 7777 666 777777765542 122211111111110 00010000001 12232334
Q ss_pred CCCceEEEEeCCCCcchH--HHHHHHhCCC-cEEEEecCCCce
Q 044659 125 NEESVYLCQGHKDKLVPF--HRYRAKKLPR-IRYHEGSAGGHL 164 (169)
Q Consensus 125 ~~~P~l~~~g~~D~~v~~--~~~~~~~~~~-~~~~~~~~~gH~ 164 (169)
+++|+|+..|..|+++|+ +-..++.++. ....++|-=.|.
T Consensus 258 iK~pvL~svgL~D~vcpPstqFA~yN~l~~~K~i~iy~~~aHe 300 (321)
T COG3458 258 IKVPVLMSVGLMDPVCPPSTQFAAYNALTTSKTIEIYPYFAHE 300 (321)
T ss_pred hccceEEeecccCCCCCChhhHHHhhcccCCceEEEeeccccc
Confidence 888899999999999999 7777777875 455566644565
No 116
>PF02273 Acyl_transf_2: Acyl transferase; InterPro: IPR003157 LuxD proteins are bacterial acyl transferases. Together with an acyl-protein synthetase (LuxE) and reductase (LuxC), they form a multienzyme complex. This complex channels activated fatty acids into the aldehyde substrate for the luciferase-catalyzed bacterial bioluminescence reaction [, ]. ; GO: 0016746 transferase activity, transferring acyl groups, 0006631 fatty acid metabolic process; PDB: 1THT_B.
Probab=98.63 E-value=9.9e-07 Score=62.70 Aligned_cols=156 Identities=13% Similarity=0.128 Sum_probs=77.0
Q ss_pred ChhhhhhcCcEEEEeCCCCC-CCCCCCCC-CChhhHHHHHHHHHH---hcCCCCceEEEEEcchHHHH-HHhhccccCCC
Q 044659 1 MQDFMDELGVYVLTFDRTGY-GESDPKPK-RPVKIEAFDIQELAN---QLNLGHKFDVIGISILTYLF-GLVSNAHHTGI 74 (169)
Q Consensus 1 ~~~~l~~~g~~v~~~d~~G~-G~s~~~~~-~~~~~~~~~~~~~~~---~~~~~~~~~l~G~S~Gg~ia-~~~~~~~~~~~ 74 (169)
+++.|..+||+|+-||-..| |.|++... .+.+....++..+++ ..+. .++.|+..|+.|.|| ..++ ..
T Consensus 49 LA~YL~~NGFhViRyDsl~HvGlSsG~I~eftms~g~~sL~~V~dwl~~~g~-~~~GLIAaSLSaRIAy~Va~-----~i 122 (294)
T PF02273_consen 49 LAEYLSANGFHVIRYDSLNHVGLSSGDINEFTMSIGKASLLTVIDWLATRGI-RRIGLIAASLSARIAYEVAA-----DI 122 (294)
T ss_dssp HHHHHHTTT--EEEE---B-------------HHHHHHHHHHHHHHHHHTT----EEEEEETTHHHHHHHHTT-----TS
T ss_pred HHHHHhhCCeEEEeccccccccCCCCChhhcchHHhHHHHHHHHHHHHhcCC-CcchhhhhhhhHHHHHHHhh-----cc
Confidence 35678899999999998765 66766543 345555556555444 4556 789999999999999 7777 54
Q ss_pred c-ceEEEEeecchhhh--h-----hhcccc----------------hhHHHHHHHHHhcCCCCCchhhhccCCCCCCceE
Q 044659 75 P-AGVALVVLVINYCI--T-----CRLQGA----------------HESLHRDIMVHLGTWEFDPMEMENQFPNNEESVY 130 (169)
Q Consensus 75 p-~~~~~~~~~~~~~~--~-----~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l 130 (169)
. ..++...++.+... + .+.+.. .+.+..+. ....|.. .+......+.+.+|++
T Consensus 123 ~lsfLitaVGVVnlr~TLe~al~~Dyl~~~i~~lp~dldfeGh~l~~~vFv~dc--~e~~w~~-l~ST~~~~k~l~iP~i 199 (294)
T PF02273_consen 123 NLSFLITAVGVVNLRDTLEKALGYDYLQLPIEQLPEDLDFEGHNLGAEVFVTDC--FEHGWDD-LDSTINDMKRLSIPFI 199 (294)
T ss_dssp --SEEEEES--S-HHHHHHHHHSS-GGGS-GGG--SEEEETTEEEEHHHHHHHH--HHTT-SS-HHHHHHHHTT--S-EE
T ss_pred CcceEEEEeeeeeHHHHHHHHhccchhhcchhhCCCcccccccccchHHHHHHH--HHcCCcc-chhHHHHHhhCCCCEE
Confidence 4 44444445554321 0 000000 01111111 2234532 2222334567899999
Q ss_pred EEEeCCCCcchH--HHHHHHhCC--CcEEEEecCCCcee
Q 044659 131 LCQGHKDKLVPF--HRYRAKKLP--RIRYHEGSAGGHLM 165 (169)
Q Consensus 131 ~~~g~~D~~v~~--~~~~~~~~~--~~~~~~~~~~gH~~ 165 (169)
.+++++|..|.. ...+.+... ..++..++|++|-+
T Consensus 200 aF~A~~D~WV~q~eV~~~~~~~~s~~~klysl~Gs~HdL 238 (294)
T PF02273_consen 200 AFTANDDDWVKQSEVEELLDNINSNKCKLYSLPGSSHDL 238 (294)
T ss_dssp EEEETT-TTS-HHHHHHHHTT-TT--EEEEEETT-SS-T
T ss_pred EEEeCCCccccHHHHHHHHHhcCCCceeEEEecCccchh
Confidence 999999999999 777777444 57888999999964
No 117
>PF12146 Hydrolase_4: Putative lysophospholipase; InterPro: IPR022742 This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length. Many members are annotated as being lysophospholipases, and others as alpha-beta hydrolase fold-containing proteins.
Probab=98.62 E-value=6.1e-08 Score=57.79 Aligned_cols=42 Identities=24% Similarity=0.417 Sum_probs=35.0
Q ss_pred hhhhhhcCcEEEEeCCCCCCCCCCCCCC--ChhhHHHHHHHHHH
Q 044659 2 QDFMDELGVYVLTFDRTGYGESDPKPKR--PVKIEAFDIQELAN 43 (169)
Q Consensus 2 ~~~l~~~g~~v~~~d~~G~G~s~~~~~~--~~~~~~~~~~~~~~ 43 (169)
++.|.+.||.|+++|+||||.|++.... +++++.+|+..+++
T Consensus 36 a~~L~~~G~~V~~~D~rGhG~S~g~rg~~~~~~~~v~D~~~~~~ 79 (79)
T PF12146_consen 36 AEFLAEQGYAVFAYDHRGHGRSEGKRGHIDSFDDYVDDLHQFIQ 79 (79)
T ss_pred HHHHHhCCCEEEEECCCcCCCCCCcccccCCHHHHHHHHHHHhC
Confidence 5678899999999999999999865433 48999999988763
No 118
>KOG2100 consensus Dipeptidyl aminopeptidase [Posttranslational modification, protein turnover, chaperones]
Probab=98.60 E-value=1.9e-07 Score=77.32 Aligned_cols=150 Identities=19% Similarity=0.177 Sum_probs=89.7
Q ss_pred hhhcCcEEEEeCCCCCCCCCCCCC----C-----ChhhHHHHHHHHHHhcCCC-CceEEEEEcchHHHH-HHhhccccCC
Q 044659 5 MDELGVYVLTFDRTGYGESDPKPK----R-----PVKIEAFDIQELANQLNLG-HKFDVIGISILTYLF-GLVSNAHHTG 73 (169)
Q Consensus 5 l~~~g~~v~~~d~~G~G~s~~~~~----~-----~~~~~~~~~~~~~~~~~~~-~~~~l~G~S~Gg~ia-~~~~~~~~~~ 73 (169)
+...|+.|+.+|.||-|.....-. . .++|+..-+..+++..-++ +++.|+|+|.||+++ ..+. .
T Consensus 554 ~s~~g~~v~~vd~RGs~~~G~~~~~~~~~~lG~~ev~D~~~~~~~~~~~~~iD~~ri~i~GwSyGGy~t~~~l~-----~ 628 (755)
T KOG2100|consen 554 VSSRGFAVLQVDGRGSGGYGWDFRSALPRNLGDVEVKDQIEAVKKVLKLPFIDRSRVAIWGWSYGGYLTLKLLE-----S 628 (755)
T ss_pred hccCCeEEEEEcCCCcCCcchhHHHHhhhhcCCcchHHHHHHHHHHHhcccccHHHeEEeccChHHHHHHHHhh-----h
Confidence 456799999999999987654311 1 1445555455555544332 789999999999999 8877 6
Q ss_pred Cc----ceEEEEeecchhhhhhhcccch-hHHHHHHHHHhcCCC--CCchhhhccCCCCCCce-EEEEeCCCCcchH--H
Q 044659 74 IP----AGVALVVLVINYCITCRLQGAH-ESLHRDIMVHLGTWE--FDPMEMENQFPNNEESV-YLCQGHKDKLVPF--H 143 (169)
Q Consensus 74 ~p----~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~P~-l~~~g~~D~~v~~--~ 143 (169)
.| +-.+.++|+++. . +..... +.+ .-...... ........+...++.|. |++||+.|..|+. .
T Consensus 629 ~~~~~fkcgvavaPVtd~--~-~yds~~tery----mg~p~~~~~~y~e~~~~~~~~~~~~~~~LliHGt~DdnVh~q~s 701 (755)
T KOG2100|consen 629 DPGDVFKCGVAVAPVTDW--L-YYDSTYTERY----MGLPSENDKGYEESSVSSPANNIKTPKLLLIHGTEDDNVHFQQS 701 (755)
T ss_pred CcCceEEEEEEecceeee--e-eecccccHhh----cCCCccccchhhhccccchhhhhccCCEEEEEcCCcCCcCHHHH
Confidence 65 334677787775 2 111111 111 00000000 00111122233344445 9999999999987 4
Q ss_pred HHHHHhCC----CcEEEEecCCCceee
Q 044659 144 RYRAKKLP----RIRYHEGSAGGHLMI 166 (169)
Q Consensus 144 ~~~~~~~~----~~~~~~~~~~gH~~~ 166 (169)
..+.+.+. ..+..++|+..|.+.
T Consensus 702 ~~~~~aL~~~gv~~~~~vypde~H~is 728 (755)
T KOG2100|consen 702 AILIKALQNAGVPFRLLVYPDENHGIS 728 (755)
T ss_pred HHHHHHHHHCCCceEEEEeCCCCcccc
Confidence 44444332 488999999999875
No 119
>PF10230 DUF2305: Uncharacterised conserved protein (DUF2305); InterPro: IPR019363 This entry contains proteins that have no known function.
Probab=98.56 E-value=4.3e-06 Score=61.29 Aligned_cols=78 Identities=17% Similarity=0.135 Sum_probs=52.0
Q ss_pred cCcEEEEeCCCCCCCCCCC-------CCCChhhHHHHHHHHHHhcC-----CCCceEEEEEcchHHHH-HHhhccccCCC
Q 044659 8 LGVYVLTFDRTGYGESDPK-------PKRPVKIEAFDIQELANQLN-----LGHKFDVIGISILTYLF-GLVSNAHHTGI 74 (169)
Q Consensus 8 ~g~~v~~~d~~G~G~s~~~-------~~~~~~~~~~~~~~~~~~~~-----~~~~~~l~G~S~Gg~ia-~~~~~~~~~~~ 74 (169)
..|.|++..+.||-.++.. ...+++++.+-..++++++- .+.+++|+|||.|++++ ..+.+......
T Consensus 31 ~~~~i~~ish~Gh~~~~~~~~~~~~~~~~sL~~QI~hk~~~i~~~~~~~~~~~~~liLiGHSIGayi~levl~r~~~~~~ 110 (266)
T PF10230_consen 31 PQFEILGISHAGHSTSPSNSKFSPNGRLFSLQDQIEHKIDFIKELIPQKNKPNVKLILIGHSIGAYIALEVLKRLPDLKF 110 (266)
T ss_pred CCCeeEEecCCCCcCCcccccccCCCCccCHHHHHHHHHHHHHHHhhhhcCCCCcEEEEeCcHHHHHHHHHHHhccccCC
Confidence 4799999999999877655 12346666665555555432 23679999999999999 77772110111
Q ss_pred c-ceEEEEeecc
Q 044659 75 P-AGVALVVLVI 85 (169)
Q Consensus 75 p-~~~~~~~~~~ 85 (169)
. .+++++.|+.
T Consensus 111 ~V~~~~lLfPTi 122 (266)
T PF10230_consen 111 RVKKVILLFPTI 122 (266)
T ss_pred ceeEEEEeCCcc
Confidence 2 6666776654
No 120
>KOG4627 consensus Kynurenine formamidase [Amino acid transport and metabolism]
Probab=98.56 E-value=1.2e-07 Score=65.57 Aligned_cols=153 Identities=12% Similarity=0.032 Sum_probs=87.5
Q ss_pred hhhhcCcEEEEeCCCCCCCCCCCC--CCChhhHHHHHHHHHHhcCCCCceEEEEEcchHHHH-HHhhccccCCCc--ceE
Q 044659 4 FMDELGVYVLTFDRTGYGESDPKP--KRPVKIEAFDIQELANQLNLGHKFDVIGISILTYLF-GLVSNAHHTGIP--AGV 78 (169)
Q Consensus 4 ~l~~~g~~v~~~d~~G~G~s~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~ia-~~~~~~~~~~~p--~~~ 78 (169)
.+.++||+|...+ ||-+.... ...+.+...-+..+++...-.+.+.+-|||.|+.++ .+..+. +.| .++
T Consensus 92 ~a~~~gY~vasvg---Y~l~~q~htL~qt~~~~~~gv~filk~~~n~k~l~~gGHSaGAHLa~qav~R~---r~prI~gl 165 (270)
T KOG4627|consen 92 PAVRRGYRVASVG---YNLCPQVHTLEQTMTQFTHGVNFILKYTENTKVLTFGGHSAGAHLAAQAVMRQ---RSPRIWGL 165 (270)
T ss_pred hhhhcCeEEEEec---cCcCcccccHHHHHHHHHHHHHHHHHhcccceeEEEcccchHHHHHHHHHHHh---cCchHHHH
Confidence 4678899998875 44442211 112444444445555555432678999999999999 666511 223 555
Q ss_pred EEEeecchhhhhhhcccchhHHHHHHHHHhcCCCCCchhhhccCCCCCCceEEEEeCCCCcchH--HHHHHHhCCCcEEE
Q 044659 79 ALVVLVINYCITCRLQGAHESLHRDIMVHLGTWEFDPMEMENQFPNNEESVYLCQGHKDKLVPF--HRYRAKKLPRIRYH 156 (169)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~g~~D~~v~~--~~~~~~~~~~~~~~ 156 (169)
.++++++.. +........ +++......-..-..++ ..+..++.|++++.+++|.---. .+.+.+...++++.
T Consensus 166 ~l~~GvY~l--~EL~~te~g---~dlgLt~~~ae~~Scdl-~~~~~v~~~ilVv~~~~espklieQnrdf~~q~~~a~~~ 239 (270)
T KOG4627|consen 166 ILLCGVYDL--RELSNTESG---NDLGLTERNAESVSCDL-WEYTDVTVWILVVAAEHESPKLIEQNRDFADQLRKASFT 239 (270)
T ss_pred HHHhhHhhH--HHHhCCccc---cccCcccchhhhcCccH-HHhcCceeeeeEeeecccCcHHHHhhhhHHHHhhhccee
Confidence 555655443 222211111 11111000000000011 12567888899999999854333 67788888889999
Q ss_pred EecCCCceeeec
Q 044659 157 EGSAGGHLMIHE 168 (169)
Q Consensus 157 ~~~~~gH~~~~e 168 (169)
.+++.+|+-.+|
T Consensus 240 ~f~n~~hy~I~~ 251 (270)
T KOG4627|consen 240 LFKNYDHYDIIE 251 (270)
T ss_pred ecCCcchhhHHH
Confidence 999999986554
No 121
>KOG3043 consensus Predicted hydrolase related to dienelactone hydrolase [General function prediction only]
Probab=98.55 E-value=4e-07 Score=63.72 Aligned_cols=129 Identities=18% Similarity=0.071 Sum_probs=77.5
Q ss_pred hhhhhhcCcEEEEeCCCCCC-CCCC-CC--------CCChhhHHHHH---HHHHHhcCCCCceEEEEEcchHHHH-HHhh
Q 044659 2 QDFMDELGVYVLTFDRTGYG-ESDP-KP--------KRPVKIEAFDI---QELANQLNLGHKFDVIGISILTYLF-GLVS 67 (169)
Q Consensus 2 ~~~l~~~g~~v~~~d~~G~G-~s~~-~~--------~~~~~~~~~~~---~~~~~~~~~~~~~~l~G~S~Gg~ia-~~~~ 67 (169)
++.++..||.|+.||+..-- .|.. +. ..+......++ .+.++..+..++|.++|+.|||-++ .+..
T Consensus 60 Adk~A~~Gy~v~vPD~~~Gdp~~~~~~~~~~~~w~~~~~~~~~~~~i~~v~k~lk~~g~~kkIGv~GfCwGak~vv~~~~ 139 (242)
T KOG3043|consen 60 ADKVALNGYTVLVPDFFRGDPWSPSLQKSERPEWMKGHSPPKIWKDITAVVKWLKNHGDSKKIGVVGFCWGAKVVVTLSA 139 (242)
T ss_pred HHHHhcCCcEEEcchhhcCCCCCCCCChhhhHHHHhcCCcccchhHHHHHHHHHHHcCCcceeeEEEEeecceEEEEeec
Confidence 35567779999999987431 1111 00 11122222333 3444444534789999999999888 6666
Q ss_pred ccccCCCc--ceEEEEeecchhhhhhhcccchhHHHHHHHHHhcCCCCCchhhhccCCCCCCceEEEEeCCCCcchH---
Q 044659 68 NAHHTGIP--AGVALVVLVINYCITCRLQGAHESLHRDIMVHLGTWEFDPMEMENQFPNNEESVYLCQGHKDKLVPF--- 142 (169)
Q Consensus 68 ~~~~~~~p--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~g~~D~~v~~--- 142 (169)
..| .+++.+-|... +.++ ..++++|++++.|+.|.++|+
T Consensus 140 -----~~~~f~a~v~~hps~~---------------------------d~~D----~~~vk~Pilfl~ae~D~~~p~~~v 183 (242)
T KOG3043|consen 140 -----KDPEFDAGVSFHPSFV---------------------------DSAD----IANVKAPILFLFAELDEDVPPKDV 183 (242)
T ss_pred -----cchhheeeeEecCCcC---------------------------ChhH----HhcCCCCEEEEeecccccCCHHHH
Confidence 554 33333222110 1111 234557799999999999999
Q ss_pred --HHHHHHhCCC--cEEEEecCCCceee
Q 044659 143 --HRYRAKKLPR--IRYHEGSAGGHLMI 166 (169)
Q Consensus 143 --~~~~~~~~~~--~~~~~~~~~gH~~~ 166 (169)
.++..+..+. .+++++++.+|.++
T Consensus 184 ~~~ee~lk~~~~~~~~v~~f~g~~HGf~ 211 (242)
T KOG3043|consen 184 KAWEEKLKENPAVGSQVKTFSGVGHGFV 211 (242)
T ss_pred HHHHHHHhcCcccceeEEEcCCccchhh
Confidence 3333444443 46999999999876
No 122
>KOG2551 consensus Phospholipase/carboxyhydrolase [Amino acid transport and metabolism]
Probab=98.50 E-value=1.6e-06 Score=60.62 Aligned_cols=108 Identities=13% Similarity=0.031 Sum_probs=70.9
Q ss_pred hhhHHHHHHHHHHhcCCCCceEEEEEcchHHHH-HHhhccccC----CCc--ceEEEEeecchhhhhhhcccchhHHHHH
Q 044659 31 VKIEAFDIQELANQLNLGHKFDVIGISILTYLF-GLVSNAHHT----GIP--AGVALVVLVINYCITCRLQGAHESLHRD 103 (169)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~ia-~~~~~~~~~----~~p--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 103 (169)
.++..+-++..++..+. -=.|+|+|.|+.++ .++.+.+.. ..| +-++++++.... ...+.
T Consensus 88 ~eesl~yl~~~i~enGP--FDGllGFSQGA~laa~l~~~~~~~~~~~~~P~~kF~v~~SGf~~~---------~~~~~-- 154 (230)
T KOG2551|consen 88 FEESLEYLEDYIKENGP--FDGLLGFSQGAALAALLAGLGQKGLPYVKQPPFKFAVFISGFKFP---------SKKLD-- 154 (230)
T ss_pred hHHHHHHHHHHHHHhCC--CccccccchhHHHHHHhhcccccCCcccCCCCeEEEEEEecCCCC---------cchhh--
Confidence 44444444555555532 23699999999999 555422222 334 556666664442 00000
Q ss_pred HHHHhcCCCCCchhhhccCCCCCCceEEEEeCCCCcchH--HHHHHHhCCCcEEEEecCCCceee
Q 044659 104 IMVHLGTWEFDPMEMENQFPNNEESVYLCQGHKDKLVPF--HRYRAKKLPRIRYHEGSAGGHLMI 166 (169)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~g~~D~~v~~--~~~~~~~~~~~~~~~~~~~gH~~~ 166 (169)
-......+++|.|-+.|+.|+++|. +..+++.+++...+..|+ ||+++
T Consensus 155 --------------~~~~~~~i~~PSLHi~G~~D~iv~~~~s~~L~~~~~~a~vl~Hpg-gH~VP 204 (230)
T KOG2551|consen 155 --------------ESAYKRPLSTPSLHIFGETDTIVPSERSEQLAESFKDATVLEHPG-GHIVP 204 (230)
T ss_pred --------------hhhhccCCCCCeeEEecccceeecchHHHHHHHhcCCCeEEecCC-CccCC
Confidence 0011235667799999999999999 899999999998888888 99986
No 123
>PF03096 Ndr: Ndr family; InterPro: IPR004142 This family consists of proteins from different gene families: Ndr1/RTP/Drg1, Ndr2, and Ndr3. Their similarity was previously noted []. The precise molecular and cellular function of members of this family is still unknown, yet they are known to be involved in cellular differentiation events. The Ndr1 group was the first to be discovered. Their expression is repressed by the proto-oncogenes N-myc and c-myc, and in line with this observation, Ndr1 protein expression is down-regulated in neoplastic cells, and is reactivated when differentiation is induced by chemicals such as retinoic acid. Ndr2 and Ndr3 expression is not under the control of N-myc or c-myc. Ndr1 expression is also activated by several chemicals: tunicamycin and homocysteine induce Ndr1 in human umbilical endothelial cells; nickel induces Ndr1 in several cell types. Members of this family are found in wide variety of multicellular eukaryotes, including an Ndr1 type protein in Helianthus annuus (Common sunflower), known as Sf21. Interestingly, the highest scoring matches in the noise are all alpha/beta hydrolases (IPR000073 from INTERPRO), suggesting that this family may have an enzymatic function.; PDB: 2QMQ_A 2XMR_B 2XMQ_B 2XMS_A.
Probab=98.49 E-value=1.1e-06 Score=64.10 Aligned_cols=153 Identities=16% Similarity=0.156 Sum_probs=87.1
Q ss_pred CcEEEEeCCCCCCCCCCC-----CCCChhhHHHHHHHHHHhcCCCCceEEEEEcchHHHH-HHhhccccCCCc---ceEE
Q 044659 9 GVYVLTFDRTGYGESDPK-----PKRPVKIEAFDIQELANQLNLGHKFDVIGISILTYLF-GLVSNAHHTGIP---AGVA 79 (169)
Q Consensus 9 g~~v~~~d~~G~G~s~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~ia-~~~~~~~~~~~p---~~~~ 79 (169)
.|.++=+|.||+....+. ...+.++.++++.++++++++ +.++-+|--.|+.|- .++. .+| .+++
T Consensus 55 ~f~i~Hi~aPGqe~ga~~~p~~y~yPsmd~LAe~l~~Vl~~f~l-k~vIg~GvGAGAnIL~rfAl-----~~p~~V~GLi 128 (283)
T PF03096_consen 55 NFCIYHIDAPGQEEGAATLPEGYQYPSMDQLAEMLPEVLDHFGL-KSVIGFGVGAGANILARFAL-----KHPERVLGLI 128 (283)
T ss_dssp TSEEEEEE-TTTSTT-----TT-----HHHHHCTHHHHHHHHT----EEEEEETHHHHHHHHHHH-----HSGGGEEEEE
T ss_pred ceEEEEEeCCCCCCCcccccccccccCHHHHHHHHHHHHHhCCc-cEEEEEeeccchhhhhhccc-----cCccceeEEE
Confidence 599999999999875332 123599999999999999999 899999999999999 8888 788 7778
Q ss_pred EEeecchh--h--h-------------------------hhh----cccchhHHHHHHHHHhcC----------CC--CC
Q 044659 80 LVVLVINY--C--I-------------------------TCR----LQGAHESLHRDIMVHLGT----------WE--FD 114 (169)
Q Consensus 80 ~~~~~~~~--~--~-------------------------~~~----~~~~~~~~~~~~~~~~~~----------~~--~~ 114 (169)
++.+.... | | ..+ .....+ +...++..... |. ..
T Consensus 129 Lvn~~~~~~gw~Ew~~~K~~~~~L~~~gmt~~~~d~Ll~h~Fg~~~~~~n~D-lv~~yr~~l~~~~Np~Nl~~f~~sy~~ 207 (283)
T PF03096_consen 129 LVNPTCTAAGWMEWFYQKLSSWLLYSYGMTSSVKDYLLWHYFGKEEEENNSD-LVQTYRQHLDERINPKNLALFLNSYNS 207 (283)
T ss_dssp EES---S---HHHHHHHHHH-------CTTS-HHHHHHHHHS-HHHHHCT-H-HHHHHHHHHHT-TTHHHHHHHHHHHHT
T ss_pred EEecCCCCccHHHHHHHHHhcccccccccccchHHhhhhcccccccccccHH-HHHHHHHHHhcCCCHHHHHHHHHHHhc
Confidence 87664432 1 1 000 000000 11111110000 00 01
Q ss_pred chhhhccCCCCCCceEEEEeCCCCcchHHHHHHHhC-C-CcEEEEecCCCceeeec
Q 044659 115 PMEMENQFPNNEESVYLCQGHKDKLVPFHRYRAKKL-P-RIRYHEGSAGGHLMIHE 168 (169)
Q Consensus 115 ~~~~~~~~~~~~~P~l~~~g~~D~~v~~~~~~~~~~-~-~~~~~~~~~~gH~~~~e 168 (169)
..++....+...||+|++.|++.+.+.....+..++ | +..+..++++|=++..|
T Consensus 208 R~DL~~~~~~~~c~vLlvvG~~Sp~~~~vv~~ns~Ldp~~ttllkv~dcGglV~eE 263 (283)
T PF03096_consen 208 RTDLSIERPSLGCPVLLVVGDNSPHVDDVVEMNSKLDPTKTTLLKVADCGGLVLEE 263 (283)
T ss_dssp -----SECTTCCS-EEEEEETTSTTHHHHHHHHHHS-CCCEEEEEETT-TT-HHHH
T ss_pred cccchhhcCCCCCCeEEEEecCCcchhhHHHHHhhcCcccceEEEecccCCccccc
Confidence 112333355677999999999999988833444444 4 46788999987665543
No 124
>PF10503 Esterase_phd: Esterase PHB depolymerase
Probab=98.49 E-value=2.7e-06 Score=60.43 Aligned_cols=76 Identities=21% Similarity=0.189 Sum_probs=46.7
Q ss_pred hhhhhcCcEEEEeCCCCCCC--CCCC--C--CC----ChhhHHHHHHHHHHhcCCC-CceEEEEEcchHHHH-HHhhccc
Q 044659 3 DFMDELGVYVLTFDRTGYGE--SDPK--P--KR----PVKIEAFDIQELANQLNLG-HKFDVIGISILTYLF-GLVSNAH 70 (169)
Q Consensus 3 ~~l~~~g~~v~~~d~~G~G~--s~~~--~--~~----~~~~~~~~~~~~~~~~~~~-~~~~l~G~S~Gg~ia-~~~~~~~ 70 (169)
++..+.||-|+.|+.....+ ...+ . .. ........++++.++.+++ ++|++.|+|.||..+ .+++
T Consensus 40 ~lAd~~GfivvyP~~~~~~~~~~cw~w~~~~~~~g~~d~~~i~~lv~~v~~~~~iD~~RVyv~G~S~Gg~ma~~la~--- 116 (220)
T PF10503_consen 40 ALADREGFIVVYPEQSRRANPQGCWNWFSDDQQRGGGDVAFIAALVDYVAARYNIDPSRVYVTGLSNGGMMANVLAC--- 116 (220)
T ss_pred HHhhcCCeEEEcccccccCCCCCcccccccccccCccchhhHHHHHHhHhhhcccCCCceeeEEECHHHHHHHHHHH---
Confidence 45667899999999653211 1110 1 11 1223333445555555543 789999999999999 8888
Q ss_pred cCCCc---ceEEEEee
Q 044659 71 HTGIP---AGVALVVL 83 (169)
Q Consensus 71 ~~~~p---~~~~~~~~ 83 (169)
.+| .++.+.++
T Consensus 117 --~~pd~faa~a~~sG 130 (220)
T PF10503_consen 117 --AYPDLFAAVAVVSG 130 (220)
T ss_pred --hCCccceEEEeecc
Confidence 888 44444443
No 125
>KOG2565 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=98.48 E-value=7.7e-07 Score=66.69 Aligned_cols=61 Identities=26% Similarity=0.240 Sum_probs=54.7
Q ss_pred CcEEEEeCCCCCCCCCCCCCC--ChhhHHHHHHHHHHhcCCCCceEEEEEcchHHHH-HHhhccccCCCc
Q 044659 9 GVYVLTFDRTGYGESDPKPKR--PVKIEAFDIQELANQLNLGHKFDVIGISILTYLF-GLVSNAHHTGIP 75 (169)
Q Consensus 9 g~~v~~~d~~G~G~s~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~ia-~~~~~~~~~~~p 75 (169)
-|.||+|.+||||.|+.+... +..+.+..++.++-+++. .++.|=|..||+.|+ .++. .+|
T Consensus 188 ~FEVI~PSlPGygwSd~~sk~GFn~~a~ArvmrkLMlRLg~-nkffiqGgDwGSiI~snlas-----LyP 251 (469)
T KOG2565|consen 188 AFEVIAPSLPGYGWSDAPSKTGFNAAATARVMRKLMLRLGY-NKFFIQGGDWGSIIGSNLAS-----LYP 251 (469)
T ss_pred eEEEeccCCCCcccCcCCccCCccHHHHHHHHHHHHHHhCc-ceeEeecCchHHHHHHHHHh-----hcc
Confidence 389999999999999876544 488889999999999999 899999999999999 8888 888
No 126
>PF12740 Chlorophyllase2: Chlorophyllase enzyme; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=98.47 E-value=2e-06 Score=62.21 Aligned_cols=147 Identities=15% Similarity=0.076 Sum_probs=81.1
Q ss_pred hhhhhhcCcEEEEeCCCCCCCCCCCCCCChhhHHHHHHHHHH----hc------CCCCceEEEEEcchHHHH-HHhhccc
Q 044659 2 QDFMDELGVYVLTFDRTGYGESDPKPKRPVKIEAFDIQELAN----QL------NLGHKFDVIGISILTYLF-GLVSNAH 70 (169)
Q Consensus 2 ~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~----~~------~~~~~~~l~G~S~Gg~ia-~~~~~~~ 70 (169)
.+.++..||-|+++|+...+...... .++..++.+..+.+ .+ +. +++.|.|||-||-++ .++....
T Consensus 37 l~hvAShGyIVV~~d~~~~~~~~~~~--~~~~~~~vi~Wl~~~L~~~l~~~v~~D~-s~l~l~GHSrGGk~Af~~al~~~ 113 (259)
T PF12740_consen 37 LEHVASHGYIVVAPDLYSIGGPDDTD--EVASAAEVIDWLAKGLESKLPLGVKPDF-SKLALAGHSRGGKVAFAMALGNA 113 (259)
T ss_pred HHHHHhCceEEEEecccccCCCCcch--hHHHHHHHHHHHHhcchhhccccccccc-cceEEeeeCCCCHHHHHHHhhhc
Confidence 34567889999999977755422111 12223322222222 11 23 689999999999999 6655211
Q ss_pred cCCCc---ceEEEEeecchhhhhhhcccchhHHHHHHHHHhcCCCCCchhhhccCCCCCCceEEEEeCCCC---------
Q 044659 71 HTGIP---AGVALVVLVINYCITCRLQGAHESLHRDIMVHLGTWEFDPMEMENQFPNNEESVYLCQGHKDK--------- 138 (169)
Q Consensus 71 ~~~~p---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~g~~D~--------- 138 (169)
....+ ++++++.|+... ....+.... -+.+.+. -.+.++|++++...-+.
T Consensus 114 ~~~~~~~~~ali~lDPVdG~--~~~~~~~P~-----------v~~~~p~-----s~~~~~P~lviGtGLg~~~~~~~~~~ 175 (259)
T PF12740_consen 114 SSSLDLRFSALILLDPVDGM--SKGSQTEPP-----------VLTYTPQ-----SFDFSMPALVIGTGLGGEPRNPLFPP 175 (259)
T ss_pred ccccccceeEEEEecccccc--ccccCCCCc-----------cccCccc-----ccCCCCCeEEEecccCcccccccCCC
Confidence 11112 677777776532 000000000 0111111 22345779998766553
Q ss_pred cchH---HHHHHHhCC-CcEEEEecCCCceeeecC
Q 044659 139 LVPF---HRYRAKKLP-RIRYHEGSAGGHLMIHEK 169 (169)
Q Consensus 139 ~v~~---~~~~~~~~~-~~~~~~~~~~gH~~~~e~ 169 (169)
+.|. .+++++..+ .+-..+.++.||+-|+++
T Consensus 176 CaP~g~n~~~Ff~~~~~p~~~~v~~~~GH~d~LDd 210 (259)
T PF12740_consen 176 CAPAGVNYREFFDECKPPSWHFVAKDYGHMDFLDD 210 (259)
T ss_pred CCCCCCCHHHHHHhcCCCEEEEEeCCCCchHhhcC
Confidence 5555 566655555 455667789999988763
No 127
>COG4188 Predicted dienelactone hydrolase [General function prediction only]
Probab=98.40 E-value=3.3e-07 Score=68.77 Aligned_cols=47 Identities=19% Similarity=0.198 Sum_probs=40.1
Q ss_pred CCCCCCceEEEEeCCCCcchH---HHHHHHhCCCc--EEEEecCCCceeeec
Q 044659 122 FPNNEESVYLCQGHKDKLVPF---HRYRAKKLPRI--RYHEGSAGGHLMIHE 168 (169)
Q Consensus 122 ~~~~~~P~l~~~g~~D~~v~~---~~~~~~~~~~~--~~~~~~~~gH~~~~e 168 (169)
+.++++|++++.|..|.+.|. +......+++. -+..+|++.|+-++|
T Consensus 247 l~~v~~P~~~~a~s~D~~aP~~~~~~~~f~~l~g~~k~~~~vp~a~h~sfl~ 298 (365)
T COG4188 247 LVKVTDPVLLAAGSADGFAPPVTEQIRPFGYLPGALKYLRLVPGATHFSFLE 298 (365)
T ss_pred ceeeecceeeecccccccCCcccccccccccCCcchhheeecCCCccccccc
Confidence 566899999999999998777 77788888876 678899999998876
No 128
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=98.31 E-value=8.6e-06 Score=71.52 Aligned_cols=59 Identities=7% Similarity=-0.022 Sum_probs=48.6
Q ss_pred cCcEEEEeCCCCCCCCCCCCCCChhhHHHHHHHHHHhcCCCCceEEEEEcchHHHH-HHhh
Q 044659 8 LGVYVLTFDRTGYGESDPKPKRPVKIEAFDIQELANQLNLGHKFDVIGISILTYLF-GLVS 67 (169)
Q Consensus 8 ~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~ia-~~~~ 67 (169)
.+++|++++++|+|.+. ....++++.++++.+.++.+....++.++||||||.++ .++.
T Consensus 1093 ~~~~v~~~~~~g~~~~~-~~~~~l~~la~~~~~~i~~~~~~~p~~l~G~S~Gg~vA~e~A~ 1152 (1296)
T PRK10252 1093 PQWSIYGIQSPRPDGPM-QTATSLDEVCEAHLATLLEQQPHGPYHLLGYSLGGTLAQGIAA 1152 (1296)
T ss_pred CCCcEEEEECCCCCCCC-CCCCCHHHHHHHHHHHHHhhCCCCCEEEEEechhhHHHHHHHH
Confidence 36999999999998663 33457999999999988887643589999999999999 7766
No 129
>PF11339 DUF3141: Protein of unknown function (DUF3141); InterPro: IPR024501 This family of proteins appears to be predominantly expressed in Proteobacteria. Their function is unknown.
Probab=98.28 E-value=1.6e-05 Score=62.22 Aligned_cols=46 Identities=22% Similarity=0.294 Sum_probs=35.5
Q ss_pred CCCCCCceEEEEeCCCCcchH---HHHHHHhCCC----------cEEEEecCCCceeee
Q 044659 122 FPNNEESVYLCQGHKDKLVPF---HRYRAKKLPR----------IRYHEGSAGGHLMIH 167 (169)
Q Consensus 122 ~~~~~~P~l~~~g~~D~~v~~---~~~~~~~~~~----------~~~~~~~~~gH~~~~ 167 (169)
++++++|++++.|..|.++|+ ..++.+.+++ +-+.+.+..||...+
T Consensus 293 Lr~Ir~Piivfas~gDnITPP~QaL~WI~dlY~~~~ei~a~gQ~IVY~~h~~vGHLGIF 351 (581)
T PF11339_consen 293 LRNIRSPIIVFASYGDNITPPQQALNWIPDLYPDTEEIKAAGQTIVYLLHESVGHLGIF 351 (581)
T ss_pred hhhCCCCEEEEeccCCCCCChhHhccchHhhcCCHHHHHhCCCEEEEEecCCCCceEEE
Confidence 567999999999999999999 3366555542 345677899998654
No 130
>KOG1553 consensus Predicted alpha/beta hydrolase BAT5 [General function prediction only]
Probab=98.23 E-value=5.5e-06 Score=61.79 Aligned_cols=75 Identities=21% Similarity=0.177 Sum_probs=55.5
Q ss_pred hhcCcEEEEeCCCCCCCCCCCCCCC-hhhHHHHHH-HHHHhcCCC-CceEEEEEcchHHHH-HHhhccccCCCc--ceEE
Q 044659 6 DELGVYVLTFDRTGYGESDPKPKRP-VKIEAFDIQ-ELANQLNLG-HKFDVIGISILTYLF-GLVSNAHHTGIP--AGVA 79 (169)
Q Consensus 6 ~~~g~~v~~~d~~G~G~s~~~~~~~-~~~~~~~~~-~~~~~~~~~-~~~~l~G~S~Gg~ia-~~~~~~~~~~~p--~~~~ 79 (169)
.+.||.|+-..+||++.|.+.+... -...++.+. ..+..++.. +.|+++|+|.||..+ +++. .+| ++++
T Consensus 265 ~~lgYsvLGwNhPGFagSTG~P~p~n~~nA~DaVvQfAI~~Lgf~~edIilygWSIGGF~~~waAs-----~YPdVkavv 339 (517)
T KOG1553|consen 265 AQLGYSVLGWNHPGFAGSTGLPYPVNTLNAADAVVQFAIQVLGFRQEDIILYGWSIGGFPVAWAAS-----NYPDVKAVV 339 (517)
T ss_pred HHhCceeeccCCCCccccCCCCCcccchHHHHHHHHHHHHHcCCCccceEEEEeecCCchHHHHhh-----cCCCceEEE
Confidence 4679999999999999998876543 333344333 345566631 789999999999999 9999 899 6666
Q ss_pred EEeecc
Q 044659 80 LVVLVI 85 (169)
Q Consensus 80 ~~~~~~ 85 (169)
+-+.+.
T Consensus 340 LDAtFD 345 (517)
T KOG1553|consen 340 LDATFD 345 (517)
T ss_pred eecchh
Confidence 666543
No 131
>KOG2931 consensus Differentiation-related gene 1 protein (NDR1 protein), related proteins [Function unknown]
Probab=98.20 E-value=5.3e-05 Score=55.39 Aligned_cols=68 Identities=19% Similarity=0.312 Sum_probs=57.5
Q ss_pred cEEEEeCCCCCCCCCCC-----CCCChhhHHHHHHHHHHhcCCCCceEEEEEcchHHHH-HHhhccccCCCc---ceEEE
Q 044659 10 VYVLTFDRTGYGESDPK-----PKRPVKIEAFDIQELANQLNLGHKFDVIGISILTYLF-GLVSNAHHTGIP---AGVAL 80 (169)
Q Consensus 10 ~~v~~~d~~G~G~s~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~ia-~~~~~~~~~~~p---~~~~~ 80 (169)
|.++-+|-||+-...+. +..+.++.++++..+++++++ +.++=+|--.|++|- .+|. .+| .++++
T Consensus 79 fcv~HV~~PGqe~gAp~~p~~y~yPsmd~LAd~l~~VL~~f~l-k~vIg~GvGAGAyIL~rFAl-----~hp~rV~GLvL 152 (326)
T KOG2931|consen 79 FCVYHVDAPGQEDGAPSFPEGYPYPSMDDLADMLPEVLDHFGL-KSVIGMGVGAGAYILARFAL-----NHPERVLGLVL 152 (326)
T ss_pred eEEEecCCCccccCCccCCCCCCCCCHHHHHHHHHHHHHhcCc-ceEEEecccccHHHHHHHHh-----cChhheeEEEE
Confidence 99999999999754321 234599999999999999999 789999999999999 9999 888 77777
Q ss_pred Eee
Q 044659 81 VVL 83 (169)
Q Consensus 81 ~~~ 83 (169)
+.+
T Consensus 153 In~ 155 (326)
T KOG2931|consen 153 INC 155 (326)
T ss_pred Eec
Confidence 764
No 132
>PRK04940 hypothetical protein; Provisional
Probab=98.18 E-value=2.9e-05 Score=53.23 Aligned_cols=98 Identities=7% Similarity=0.019 Sum_probs=58.5
Q ss_pred CceEEEEEcchHHHH-HHhhccccCCCcceEEEEeecchhhhh--hhc--ccchhHHHHHHHHHhcCCCCCchhhhccCC
Q 044659 49 HKFDVIGISILTYLF-GLVSNAHHTGIPAGVALVVLVINYCIT--CRL--QGAHESLHRDIMVHLGTWEFDPMEMENQFP 123 (169)
Q Consensus 49 ~~~~l~G~S~Gg~ia-~~~~~~~~~~~p~~~~~~~~~~~~~~~--~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 123 (169)
+++.|||.|+||+.| .++. ++....|++.|+..++.. .+. +..+..+......... +..|
T Consensus 60 ~~~~liGSSLGGyyA~~La~-----~~g~~aVLiNPAv~P~~~L~~~ig~~~~y~~~~~~h~~eL~--------~~~p-- 124 (180)
T PRK04940 60 ERPLICGVGLGGYWAERIGF-----LCGIRQVIFNPNLFPEENMEGKIDRPEEYADIATKCVTNFR--------EKNR-- 124 (180)
T ss_pred CCcEEEEeChHHHHHHHHHH-----HHCCCEEEECCCCChHHHHHHHhCCCcchhhhhHHHHHHhh--------hcCc--
Confidence 579999999999999 8888 778888999998765321 010 0001111111111000 1111
Q ss_pred CCCCceEEEEeCCCCcchHHHHHHHhCCCc-EEEEecCCCcee
Q 044659 124 NNEESVYLCQGHKDKLVPFHRYRAKKLPRI-RYHEGSAGGHLM 165 (169)
Q Consensus 124 ~~~~P~l~~~g~~D~~v~~~~~~~~~~~~~-~~~~~~~~gH~~ 165 (169)
-..+++..+.|++.+. +...+.+.+. +.++.+|+.|-+
T Consensus 125 ---~r~~vllq~gDEvLDy-r~a~~~y~~~y~~~v~~GGdH~f 163 (180)
T PRK04940 125 ---DRCLVILSRNDEVLDS-QRTAEELHPYYEIVWDEEQTHKF 163 (180)
T ss_pred ---ccEEEEEeCCCcccCH-HHHHHHhccCceEEEECCCCCCC
Confidence 1268899999999997 1122222344 688888888864
No 133
>KOG2112 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=98.09 E-value=2.4e-05 Score=54.34 Aligned_cols=106 Identities=20% Similarity=0.255 Sum_probs=65.2
Q ss_pred hhhHHHHHHHHHHhc---CC-CCceEEEEEcchHHHH-HHhhccccCCCc---ceEEEEeecchhhhhhhcccchhHHHH
Q 044659 31 VKIEAFDIQELANQL---NL-GHKFDVIGISILTYLF-GLVSNAHHTGIP---AGVALVVLVINYCITCRLQGAHESLHR 102 (169)
Q Consensus 31 ~~~~~~~~~~~~~~~---~~-~~~~~l~G~S~Gg~ia-~~~~~~~~~~~p---~~~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (169)
....++-+..++++. +. ..+|.+-|+||||.++ ..+. .+| .+++-.++..+.
T Consensus 71 ~~~aa~~i~~Li~~e~~~Gi~~~rI~igGfs~G~a~aL~~~~-----~~~~~l~G~~~~s~~~p~--------------- 130 (206)
T KOG2112|consen 71 LHRAADNIANLIDNEPANGIPSNRIGIGGFSQGGALALYSAL-----TYPKALGGIFALSGFLPR--------------- 130 (206)
T ss_pred HHHHHHHHHHHHHHHHHcCCCccceeEcccCchHHHHHHHHh-----ccccccceeecccccccc---------------
Confidence 555555555555543 21 1679999999999999 6666 556 333333332221
Q ss_pred HHHHHhcCCCCCchhhhccCCCCCCceEEEEeCCCCcchH------HHHHHHhCCCcEEEEecCCCceee
Q 044659 103 DIMVHLGTWEFDPMEMENQFPNNEESVYLCQGHKDKLVPF------HRYRAKKLPRIRYHEGSAGGHLMI 166 (169)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~g~~D~~v~~------~~~~~~~~~~~~~~~~~~~gH~~~ 166 (169)
....+..|..-.. ..|++..||+.|++||. .+.+.......+++.+++-+|...
T Consensus 131 -~~~~~~~~~~~~~---------~~~i~~~Hg~~d~~vp~~~g~~s~~~l~~~~~~~~f~~y~g~~h~~~ 190 (206)
T KOG2112|consen 131 -ASIGLPGWLPGVN---------YTPILLCHGTADPLVPFRFGEKSAQFLKSLGVRVTFKPYPGLGHSTS 190 (206)
T ss_pred -chhhccCCccccC---------cchhheecccCCceeehHHHHHHHHHHHHcCCceeeeecCCcccccc
Confidence 0111112211101 45599999999999999 344444445689999999999754
No 134
>KOG1515 consensus Arylacetamide deacetylase [Defense mechanisms]
Probab=98.07 E-value=0.0004 Score=52.48 Aligned_cols=159 Identities=14% Similarity=0.024 Sum_probs=89.8
Q ss_pred hhhcCcEEEEeCCCCCCCCCCCCCC-ChhhHHHHHHHHHHh--c----CCCCceEEEEEcchHHHH-HHhhccccCC--C
Q 044659 5 MDELGVYVLTFDRTGYGESDPKPKR-PVKIEAFDIQELANQ--L----NLGHKFDVIGISILTYLF-GLVSNAHHTG--I 74 (169)
Q Consensus 5 l~~~g~~v~~~d~~G~G~s~~~~~~-~~~~~~~~~~~~~~~--~----~~~~~~~l~G~S~Gg~ia-~~~~~~~~~~--~ 74 (169)
+.+.+..|+++|+|= ....+.. .++|..+.+..+.++ + +. ++++|+|-|.||-+| ..+.++.... .
T Consensus 119 a~~~~~vvvSVdYRL---APEh~~Pa~y~D~~~Al~w~~~~~~~~~~~D~-~rv~l~GDSaGGNia~~va~r~~~~~~~~ 194 (336)
T KOG1515|consen 119 AAELNCVVVSVDYRL---APEHPFPAAYDDGWAALKWVLKNSWLKLGADP-SRVFLAGDSAGGNIAHVVAQRAADEKLSK 194 (336)
T ss_pred HHHcCeEEEecCccc---CCCCCCCccchHHHHHHHHHHHhHHHHhCCCc-ccEEEEccCccHHHHHHHHHHHhhccCCC
Confidence 466789999999993 3222222 377888887777774 2 23 789999999999999 5554322211 2
Q ss_pred c--ceEEEEeecchhhh---hhh---cccchh----HHHHHHHHHhcCCCCCch-hhhc--------cCCCCCC-ceEEE
Q 044659 75 P--AGVALVVLVINYCI---TCR---LQGAHE----SLHRDIMVHLGTWEFDPM-EMEN--------QFPNNEE-SVYLC 132 (169)
Q Consensus 75 p--~~~~~~~~~~~~~~---~~~---~~~~~~----~~~~~~~~~~~~~~~~~~-~~~~--------~~~~~~~-P~l~~ 132 (169)
+ .+.+++.|...... ... ...... .....+.....+-....+ ..-+ ......+ |++++
T Consensus 195 ~ki~g~ili~P~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~w~~~lP~~~~~~~~p~~np~~~~~~~d~~~~~lp~tlv~ 274 (336)
T KOG1515|consen 195 PKIKGQILIYPFFQGTDRTESEKQQNLNGSPELARPKIDKWWRLLLPNGKTDLDHPFINPVGNSLAKDLSGLGLPPTLVV 274 (336)
T ss_pred cceEEEEEEecccCCCCCCCHHHHHhhcCCcchhHHHHHHHHHHhCCCCCCCcCCccccccccccccCccccCCCceEEE
Confidence 2 77888877654311 100 111000 000111111111000000 0011 1223444 59999
Q ss_pred EeCCCCcchH----HHHHHHhCCCcEEEEecCCCceeee
Q 044659 133 QGHKDKLVPF----HRYRAKKLPRIRYHEGSAGGHLMIH 167 (169)
Q Consensus 133 ~g~~D~~v~~----~~~~~~~~~~~~~~~~~~~gH~~~~ 167 (169)
.++.|.+... .+++.+.--..++++++++.|.+++
T Consensus 275 ~ag~D~L~D~~~~Y~~~Lkk~Gv~v~~~~~e~~~H~~~~ 313 (336)
T KOG1515|consen 275 VAGYDVLRDEGLAYAEKLKKAGVEVTLIHYEDGFHGFHI 313 (336)
T ss_pred EeCchhhhhhhHHHHHHHHHcCCeEEEEEECCCeeEEEe
Confidence 9999999887 4555444445677889999999875
No 135
>PF07819 PGAP1: PGAP1-like protein; InterPro: IPR012908 The sequences found in this family are similar to PGAP1 (Q765A7 from SWISSPROT). This is an endoplasmic reticulum membrane protein with a catalytic serine-containing motif that is conserved in a number of lipases. PGAP1 functions as a GPI inositol-deacylase; this deacylation is important for the efficient transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi body [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006505 GPI anchor metabolic process, 0006886 intracellular protein transport, 0031227 intrinsic to endoplasmic reticulum membrane
Probab=98.02 E-value=3.6e-05 Score=55.07 Aligned_cols=57 Identities=14% Similarity=-0.012 Sum_probs=34.8
Q ss_pred CcEEEEeCCCCCCCCCCCCCCChhh----HHHHHHHHHHhc----CCCCceEEEEEcchHHHH-HHhh
Q 044659 9 GVYVLTFDRTGYGESDPKPKRPVKI----EAFDIQELANQL----NLGHKFDVIGISILTYLF-GLVS 67 (169)
Q Consensus 9 g~~v~~~d~~G~G~s~~~~~~~~~~----~~~~~~~~~~~~----~~~~~~~l~G~S~Gg~ia-~~~~ 67 (169)
.+++++.|+......-. ...+.+ ..+.++.+++.. ...++++||||||||.++ .++.
T Consensus 39 ~~d~ft~df~~~~s~~~--g~~l~~q~~~~~~~i~~i~~~~~~~~~~~~~vilVgHSmGGlvar~~l~ 104 (225)
T PF07819_consen 39 HFDFFTVDFNEELSAFH--GRTLQRQAEFLAEAIKYILELYKSNRPPPRSVILVGHSMGGLVARSALS 104 (225)
T ss_pred ceeEEEeccCccccccc--cccHHHHHHHHHHHHHHHHHhhhhccCCCCceEEEEEchhhHHHHHHHh
Confidence 58899999876542211 111222 222334444444 123789999999999999 7666
No 136
>PF06028 DUF915: Alpha/beta hydrolase of unknown function (DUF915); InterPro: IPR010315 This family consists of bacterial proteins of unknown function, which are hydrolase-like.; PDB: 3LP5_A 3FLE_A 3DS8_A.
Probab=97.96 E-value=0.0002 Score=52.18 Aligned_cols=128 Identities=17% Similarity=0.158 Sum_probs=63.9
Q ss_pred hhhHHHHHHHHHHhc----CCCCceEEEEEcchHHHH-HHhhc-cccCCCc--ceEEEEeecchhhh-h--------hhc
Q 044659 31 VKIEAFDIQELANQL----NLGHKFDVIGISILTYLF-GLVSN-AHHTGIP--AGVALVVLVINYCI-T--------CRL 93 (169)
Q Consensus 31 ~~~~~~~~~~~~~~~----~~~~~~~l~G~S~Gg~ia-~~~~~-~~~~~~p--~~~~~~~~~~~~~~-~--------~~~ 93 (169)
....+..+..++.+| +. +++.+|||||||.++ .++.+ .....+| ..+|.++...+... . ...
T Consensus 82 ~~~qa~wl~~vl~~L~~~Y~~-~~~N~VGHSmGg~~~~~yl~~~~~~~~~P~l~K~V~Ia~pfng~~~~~~~~~~~~~~~ 160 (255)
T PF06028_consen 82 YKKQAKWLKKVLKYLKKKYHF-KKFNLVGHSMGGLSWTYYLENYGNDKNLPKLNKLVTIAGPFNGILGMNDDQNQNDLNK 160 (255)
T ss_dssp HHHHHHHHHHHHHHHHHCC---SEEEEEEETHHHHHHHHHHHHCTTGTTS-EEEEEEEES--TTTTTCCSC-TTTT-CST
T ss_pred HHHHHHHHHHHHHHHHHhcCC-CEEeEEEECccHHHHHHHHHHhccCCCCcccceEEEeccccCccccccccchhhhhcc
Confidence 455555555555544 56 799999999999999 66552 2233466 67777765443211 0 000
Q ss_pred ccchhHHHHHHHHHhcCCCCCchhhhccCCCCCCceEEEEeC------CCCcchH--HHHHHHhCCC----cEEEEec--
Q 044659 94 QGAHESLHRDIMVHLGTWEFDPMEMENQFPNNEESVYLCQGH------KDKLVPF--HRYRAKKLPR----IRYHEGS-- 159 (169)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~g~------~D~~v~~--~~~~~~~~~~----~~~~~~~-- 159 (169)
.+ .......+..+... .+ ....-++.+|.|.|+ .|..||. +..+...+.+ -+..++.
T Consensus 161 ~g-p~~~~~~y~~l~~~-------~~-~~~p~~i~VLnI~G~~~~g~~sDG~V~~~Ss~sl~~L~~~~~~~Y~e~~v~G~ 231 (255)
T PF06028_consen 161 NG-PKSMTPMYQDLLKN-------RR-KNFPKNIQVLNIYGDLEDGSNSDGIVPNASSLSLRYLLKNRAKSYQEKTVTGK 231 (255)
T ss_dssp T--BSS--HHHHHHHHT-------HG-GGSTTT-EEEEEEEESBTTCSBTSSSBHHHHCTHHHHCTTTSSEEEEEEEESG
T ss_pred cC-CcccCHHHHHHHHH-------HH-hhCCCCeEEEEEecccCCCCCCCeEEeHHHHHHHHHHhhcccCceEEEEEECC
Confidence 01 00011111111111 00 111233449999998 8999999 4444444433 3444554
Q ss_pred CCCceeeec
Q 044659 160 AGGHLMIHE 168 (169)
Q Consensus 160 ~~gH~~~~e 168 (169)
++.|.-..|
T Consensus 232 ~a~HS~Lhe 240 (255)
T PF06028_consen 232 DAQHSQLHE 240 (255)
T ss_dssp GGSCCGGGC
T ss_pred CCccccCCC
Confidence 457765544
No 137
>KOG2624 consensus Triglyceride lipase-cholesterol esterase [Lipid transport and metabolism]
Probab=97.95 E-value=0.00027 Score=54.63 Aligned_cols=77 Identities=16% Similarity=0.082 Sum_probs=53.8
Q ss_pred hhhhhcCcEEEEeCCCCCCCCCCCC------CC-----C-----hhhHHHHHHHHHHhcCCCCceEEEEEcchHHHH-HH
Q 044659 3 DFMDELGVYVLTFDRTGYGESDPKP------KR-----P-----VKIEAFDIQELANQLNLGHKFDVIGISILTYLF-GL 65 (169)
Q Consensus 3 ~~l~~~g~~v~~~d~~G~G~s~~~~------~~-----~-----~~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~ia-~~ 65 (169)
-.|++.||.|..-..||---|.... .. + ..|....|+.+++.-+. ++++.+|||.|+.+. .+
T Consensus 100 f~LadaGYDVWLgN~RGn~ySr~h~~l~~~~~~~FW~FS~~Em~~yDLPA~IdyIL~~T~~-~kl~yvGHSQGtt~~fv~ 178 (403)
T KOG2624|consen 100 FLLADAGYDVWLGNNRGNTYSRKHKKLSPSSDKEFWDFSWHEMGTYDLPAMIDYILEKTGQ-EKLHYVGHSQGTTTFFVM 178 (403)
T ss_pred HHHHHcCCceeeecCcCcccchhhcccCCcCCcceeecchhhhhhcCHHHHHHHHHHhccc-cceEEEEEEccchhheeh
Confidence 3578999999999999966564321 11 1 33444455566666667 899999999999999 66
Q ss_pred hhccccCCCc------ceEEEEeecc
Q 044659 66 VSNAHHTGIP------AGVALVVLVI 85 (169)
Q Consensus 66 ~~~~~~~~~p------~~~~~~~~~~ 85 (169)
+. ..| +...+++|+.
T Consensus 179 lS-----~~p~~~~kI~~~~aLAP~~ 199 (403)
T KOG2624|consen 179 LS-----ERPEYNKKIKSFIALAPAA 199 (403)
T ss_pred hc-----ccchhhhhhheeeeecchh
Confidence 66 333 5666777766
No 138
>PF10142 PhoPQ_related: PhoPQ-activated pathogenicity-related protein; InterPro: IPR009199 Proteins in this entry are believed to play a role in virulence/pathogenicity in Salmonella. Salmonella typhi PqaA has been shown to be activated by PhoP/Q two-component regulatory system, which regulates many virulence genes []. It has been also shown to confer resistance to antimicrobial peptides (melittin) []. Members of this family are predicted to belong to the alpha/beta hydrolase domain superfamily.
Probab=97.89 E-value=0.00023 Score=54.32 Aligned_cols=120 Identities=19% Similarity=0.228 Sum_probs=74.1
Q ss_pred hhhHHHHHHHHHHhc---CCCCceEEEEEcchHHHH-HHhhccccCCCcceEEEEeec----chhhhhhhcccchhHHHH
Q 044659 31 VKIEAFDIQELANQL---NLGHKFDVIGISILTYLF-GLVSNAHHTGIPAGVALVVLV----INYCITCRLQGAHESLHR 102 (169)
Q Consensus 31 ~~~~~~~~~~~~~~~---~~~~~~~l~G~S~Gg~ia-~~~~~~~~~~~p~~~~~~~~~----~~~~~~~~~~~~~~~~~~ 102 (169)
.....+.+++++++. ++ +++++.|.|-=|+.+ .+++ .+.++..+.|+ .+.. ..+.+
T Consensus 152 ~vrAMD~vq~~~~~~~~~~i-~~FvV~GaSKRGWTtWltaa------~D~RV~aivP~Vid~LN~~---------~~l~h 215 (367)
T PF10142_consen 152 AVRAMDAVQEFLKKKFGVNI-EKFVVTGASKRGWTTWLTAA------VDPRVKAIVPIVIDVLNMK---------ANLEH 215 (367)
T ss_pred HHHHHHHHHHHHHhhcCCCc-cEEEEeCCchHhHHHHHhhc------cCcceeEEeeEEEccCCcH---------HHHHH
Confidence 334445556666665 56 899999999999999 5554 33444444443 3321 11111
Q ss_pred HHHHHhcCCCCCch--------------------hhhcc---CCCCCCceEEEEeCCCCcchH--HHHHHHhCCC-cEEE
Q 044659 103 DIMVHLGTWEFDPM--------------------EMENQ---FPNNEESVYLCQGHKDKLVPF--HRYRAKKLPR-IRYH 156 (169)
Q Consensus 103 ~~~~~~~~~~~~~~--------------------~~~~~---~~~~~~P~l~~~g~~D~~v~~--~~~~~~~~~~-~~~~ 156 (169)
.+...-+.|.+... .+..| ....++|.+++.|..|+++.+ ...+.+.+|+ ..++
T Consensus 216 ~y~~yG~~ws~a~~dY~~~gi~~~l~tp~f~~L~~ivDP~~Y~~rL~~PK~ii~atgDeFf~pD~~~~y~d~L~G~K~lr 295 (367)
T PF10142_consen 216 QYRSYGGNWSFAFQDYYNEGITQQLDTPEFDKLMQIVDPYSYRDRLTMPKYIINATGDEFFVPDSSNFYYDKLPGEKYLR 295 (367)
T ss_pred HHHHhCCCCccchhhhhHhCchhhcCCHHHHHHHHhcCHHHHHHhcCccEEEEecCCCceeccCchHHHHhhCCCCeeEE
Confidence 11111112322111 11122 124689999999999999999 8888999986 6678
Q ss_pred EecCCCceee
Q 044659 157 EGSAGGHLMI 166 (169)
Q Consensus 157 ~~~~~gH~~~ 166 (169)
.+|+++|...
T Consensus 296 ~vPN~~H~~~ 305 (367)
T PF10142_consen 296 YVPNAGHSLI 305 (367)
T ss_pred eCCCCCcccc
Confidence 9999999753
No 139
>COG4099 Predicted peptidase [General function prediction only]
Probab=97.89 E-value=0.00012 Score=53.81 Aligned_cols=101 Identities=20% Similarity=0.182 Sum_probs=62.9
Q ss_pred hcCcEEEEeCC-CCCCCCCCCCCCChhhHHHHHH-HHHHhcCCC-CceEEEEEcchHHHH-HHhhccccCCCc---ceEE
Q 044659 7 ELGVYVLTFDR-TGYGESDPKPKRPVKIEAFDIQ-ELANQLNLG-HKFDVIGISILTYLF-GLVSNAHHTGIP---AGVA 79 (169)
Q Consensus 7 ~~g~~v~~~d~-~G~G~s~~~~~~~~~~~~~~~~-~~~~~~~~~-~~~~l~G~S~Gg~ia-~~~~~~~~~~~p---~~~~ 79 (169)
+-+|-|++|.+ +-+-.++...........+.+. .+.++.+++ ++|+++|.|+||.-+ .++. .+| .+.+
T Consensus 224 edqcfVlAPQy~~if~d~e~~t~~~l~~~idli~~vlas~ynID~sRIYviGlSrG~~gt~al~~-----kfPdfFAaa~ 298 (387)
T COG4099 224 EDQCFVLAPQYNPIFADSEEKTLLYLIEKIDLILEVLASTYNIDRSRIYVIGLSRGGFGTWALAE-----KFPDFFAAAV 298 (387)
T ss_pred cCceEEEcccccccccccccccchhHHHHHHHHHHHHhhccCcccceEEEEeecCcchhhHHHHH-----hCchhhheee
Confidence 44577777773 2233343322222444455555 466677764 789999999999999 8888 888 5666
Q ss_pred EEeecchhhhhhhcccchhHHHHHHHHHhcCCCCCchhhhccCCCCCCceEEEEeCCCCcchH
Q 044659 80 LVVLVINYCITCRLQGAHESLHRDIMVHLGTWEFDPMEMENQFPNNEESVYLCQGHKDKLVPF 142 (169)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~g~~D~~v~~ 142 (169)
.+++-... ..+. -..-+.|+-++|+++|+++|.
T Consensus 299 ~iaG~~d~----------v~lv--------------------~~lk~~piWvfhs~dDkv~Pv 331 (387)
T COG4099 299 PIAGGGDR----------VYLV--------------------RTLKKAPIWVFHSSDDKVIPV 331 (387)
T ss_pred eecCCCch----------hhhh--------------------hhhccCceEEEEecCCCcccc
Confidence 66652221 0000 011233499999999999998
No 140
>PF08386 Abhydrolase_4: TAP-like protein; InterPro: IPR013595 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents a C-terminal domain associated with putative hydrolases and bacterial peptidases that belong to MEROPS peptidase family S33 (clan SC). They are related to a tripeptidyl aminopeptidase from Streptomyces lividans (Q54410 from SWISSPROT). A member of this family (Q6E3K7 from SWISSPROT) is thought to be involved in the C-terminal processing of propionicin F, a bacteriocidin characterised from Propionibacterium freudenreichii []. ; GO: 0008233 peptidase activity
Probab=97.80 E-value=5.3e-05 Score=47.47 Aligned_cols=42 Identities=24% Similarity=0.411 Sum_probs=39.3
Q ss_pred CCCceEEEEeCCCCcchH--HHHHHHhCCCcEEEEecCCCceee
Q 044659 125 NEESVYLCQGHKDKLVPF--HRYRAKKLPRIRYHEGSAGGHLMI 166 (169)
Q Consensus 125 ~~~P~l~~~g~~D~~v~~--~~~~~~~~~~~~~~~~~~~gH~~~ 166 (169)
...|+|++.++.|+.+|. ++.+.+.+++++++++++.||-..
T Consensus 33 ~~~piL~l~~~~Dp~TP~~~a~~~~~~l~~s~lvt~~g~gHg~~ 76 (103)
T PF08386_consen 33 GAPPILVLGGTHDPVTPYEGARAMAARLPGSRLVTVDGAGHGVY 76 (103)
T ss_pred CCCCEEEEecCcCCCCcHHHHHHHHHHCCCceEEEEeccCccee
Confidence 358899999999999999 999999999999999999999876
No 141
>KOG4840 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=97.75 E-value=0.00019 Score=50.65 Aligned_cols=80 Identities=14% Similarity=0.050 Sum_probs=54.0
Q ss_pred hhhhhcCcEEEEeCCCCCCCCCCCCCCChhhHHHHHHHHHHhcCCC---CceEEEEEcchHHHH-HHhhccccCCCc---
Q 044659 3 DFMDELGVYVLTFDRTGYGESDPKPKRPVKIEAFDIQELANQLNLG---HKFDVIGISILTYLF-GLVSNAHHTGIP--- 75 (169)
Q Consensus 3 ~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~l~G~S~Gg~ia-~~~~~~~~~~~p--- 75 (169)
..|.+.+|.++-+-++.+-.-. -..++.+-++|+..++++++.. .+++|+|||-|..-. .++.| . ..|
T Consensus 60 ~~lde~~wslVq~q~~Ssy~G~--Gt~slk~D~edl~~l~~Hi~~~~fSt~vVL~GhSTGcQdi~yYlTn--t-~~~r~i 134 (299)
T KOG4840|consen 60 RYLDENSWSLVQPQLRSSYNGY--GTFSLKDDVEDLKCLLEHIQLCGFSTDVVLVGHSTGCQDIMYYLTN--T-TKDRKI 134 (299)
T ss_pred HHHhhccceeeeeecccccccc--ccccccccHHHHHHHHHHhhccCcccceEEEecCccchHHHHHHHh--c-cchHHH
Confidence 4567888999988877432110 1223778889999999988642 489999999999988 55531 1 233
Q ss_pred ceEEEEeecchh
Q 044659 76 AGVALVVLVINY 87 (169)
Q Consensus 76 ~~~~~~~~~~~~ 87 (169)
...++.+|+...
T Consensus 135 raaIlqApVSDr 146 (299)
T KOG4840|consen 135 RAAILQAPVSDR 146 (299)
T ss_pred HHHHHhCccchh
Confidence 445555676654
No 142
>smart00824 PKS_TE Thioesterase. Peptide synthetases are involved in the non-ribosomal synthesis of peptide antibiotics. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates. There are also modules within the peptide synthetases that also share this similarity. With respect to antibiotic production, thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Thioesterases (non-integrated) have molecular masses of 25-29 kDa.
Probab=97.74 E-value=0.00029 Score=48.91 Aligned_cols=58 Identities=17% Similarity=0.157 Sum_probs=41.0
Q ss_pred CcEEEEeCCCCCCCCCCCCCCChhhHHHHHHHHHHhcCCCCceEEEEEcchHHHH-HHhh
Q 044659 9 GVYVLTFDRTGYGESDPKPKRPVKIEAFDIQELANQLNLGHKFDVIGISILTYLF-GLVS 67 (169)
Q Consensus 9 g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~ia-~~~~ 67 (169)
.+.+++++++|++.+... ..++++.++...+.+.......++.++|||+||.++ ..+.
T Consensus 25 ~~~v~~~~~~g~~~~~~~-~~~~~~~~~~~~~~l~~~~~~~~~~l~g~s~Gg~~a~~~a~ 83 (212)
T smart00824 25 RRDVSALPLPGFGPGEPL-PASADALVEAQAEAVLRAAGGRPFVLVGHSSGGLLAHAVAA 83 (212)
T ss_pred CccEEEecCCCCCCCCCC-CCCHHHHHHHHHHHHHHhcCCCCeEEEEECHHHHHHHHHHH
Confidence 589999999999866433 234666666554444433222689999999999999 6666
No 143
>COG3319 Thioesterase domains of type I polyketide synthases or non-ribosomal peptide synthetases [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=97.67 E-value=0.00022 Score=51.94 Aligned_cols=59 Identities=14% Similarity=0.159 Sum_probs=47.2
Q ss_pred CcEEEEeCCCCCCCCCCCCCCChhhHHHHHHHHHHhcCCCCceEEEEEcchHHHH-HHhhc
Q 044659 9 GVYVLTFDRTGYGESDPKPKRPVKIEAFDIQELANQLNLGHKFDVIGISILTYLF-GLVSN 68 (169)
Q Consensus 9 g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~ia-~~~~~ 68 (169)
...|+..+.||+|. ......++++.++...+.+.+.....+++|+|+|+||.+| .++..
T Consensus 26 ~~~v~~l~a~g~~~-~~~~~~~l~~~a~~yv~~Ir~~QP~GPy~L~G~S~GG~vA~evA~q 85 (257)
T COG3319 26 LLPVYGLQAPGYGA-GEQPFASLDDMAAAYVAAIRRVQPEGPYVLLGWSLGGAVAFEVAAQ 85 (257)
T ss_pred CceeeccccCcccc-cccccCCHHHHHHHHHHHHHHhCCCCCEEEEeeccccHHHHHHHHH
Confidence 37899999999985 2344556888888887777777654799999999999999 87773
No 144
>PF01674 Lipase_2: Lipase (class 2); InterPro: IPR002918 Lipases or triacylglycerol acylhydrolases hydrolyse ester bonds in triacylglycerol giving diacylglycerol, monoacylglycerol, glycerol and free fatty acids []. This group of lipases has been called class 2 as they are not clearly related to other lipase families, and includes LipA and LipB from Bacillus subtilis [] and uncharacterised proteins from Caenorhabditis.; PDB: 2VTV_B 2X76_A 2X5X_A 2QXU_A 3QMM_A 1I6W_A 3D2C_J 2QXT_B 1R50_A 1T2N_A ....
Probab=97.66 E-value=2.4e-05 Score=55.61 Aligned_cols=64 Identities=14% Similarity=0.088 Sum_probs=35.7
Q ss_pred hhhhhhcCcE---EEEeCCCCCCCCCCCC-CCC----hhhHHHHHHHHHHhcCCCCceEEEEEcchHHHH-HHhh
Q 044659 2 QDFMDELGVY---VLTFDRTGYGESDPKP-KRP----VKIEAFDIQELANQLNLGHKFDVIGISILTYLF-GLVS 67 (169)
Q Consensus 2 ~~~l~~~g~~---v~~~d~~G~G~s~~~~-~~~----~~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~ia-~~~~ 67 (169)
.+.|.+.||. ++++++-....+.... ... ..+.++-+++++++-+. +|.||||||||.++ .+..
T Consensus 22 ~~~l~~~GY~~~~vya~tyg~~~~~~~~~~~~~~~~~~~~l~~fI~~Vl~~TGa--kVDIVgHS~G~~iaR~yi~ 94 (219)
T PF01674_consen 22 APYLKAAGYCDSEVYALTYGSGNGSPSVQNAHMSCESAKQLRAFIDAVLAYTGA--KVDIVGHSMGGTIARYYIK 94 (219)
T ss_dssp HHHHHHTT--CCCEEEE--S-CCHHTHHHHHHB-HHHHHHHHHHHHHHHHHHT----EEEEEETCHHHHHHHHHH
T ss_pred HHHHHHcCCCcceeEeccCCCCCCCCcccccccchhhHHHHHHHHHHHHHhhCC--EEEEEEcCCcCHHHHHHHH
Confidence 4678899999 7999985444322110 011 23444444555555543 89999999999999 6665
No 145
>KOG1551 consensus Uncharacterized conserved protein [Function unknown]
Probab=97.63 E-value=0.00044 Score=50.10 Aligned_cols=37 Identities=19% Similarity=0.263 Sum_probs=32.7
Q ss_pred eEEEEeCCCCcchH--HHHHHHhCCCcEEEEecCCCceee
Q 044659 129 VYLCQGHKDKLVPF--HRYRAKKLPRIRYHEGSAGGHLMI 166 (169)
Q Consensus 129 ~l~~~g~~D~~v~~--~~~~~~~~~~~~~~~~~~~gH~~~ 166 (169)
+.++.+++|..+|. ...+.+..|+++...+++ ||...
T Consensus 309 ~ivv~A~~D~Yipr~gv~~lQ~~WPg~eVr~~eg-GHVsa 347 (371)
T KOG1551|consen 309 IIVVQAKEDAYIPRTGVRSLQEIWPGCEVRYLEG-GHVSA 347 (371)
T ss_pred EEEEEecCCccccccCcHHHHHhCCCCEEEEeec-Cceee
Confidence 56789999999999 899999999999999985 99854
No 146
>PF07224 Chlorophyllase: Chlorophyllase; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=97.62 E-value=0.00069 Score=49.07 Aligned_cols=79 Identities=20% Similarity=0.107 Sum_probs=44.4
Q ss_pred hhhhcCcEEEEeCCCCCCCCCCCCCCChhhHHHHHHHHHHhc----------CCCCceEEEEEcchHHHH-HHhhccccC
Q 044659 4 FMDELGVYVLTFDRTGYGESDPKPKRPVKIEAFDIQELANQL----------NLGHKFDVIGISILTYLF-GLVSNAHHT 72 (169)
Q Consensus 4 ~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~l~G~S~Gg~ia-~~~~~~~~~ 72 (169)
.+...||-|++|++-..- .+.....++..++-+..+.+-+ ++ +++.++|||.||-.| +++.+ ...
T Consensus 68 HIASHGfIVVAPQl~~~~--~p~~~~Ei~~aa~V~~WL~~gL~~~Lp~~V~~nl-~klal~GHSrGGktAFAlALg-~a~ 143 (307)
T PF07224_consen 68 HIASHGFIVVAPQLYTLF--PPDGQDEIKSAASVINWLPEGLQHVLPENVEANL-SKLALSGHSRGGKTAFALALG-YAT 143 (307)
T ss_pred HHhhcCeEEEechhhccc--CCCchHHHHHHHHHHHHHHhhhhhhCCCCccccc-ceEEEeecCCccHHHHHHHhc-ccc
Confidence 356779999999998532 1111111333333333322221 24 689999999999999 66661 112
Q ss_pred CCc-ceEEEEeecch
Q 044659 73 GIP-AGVALVVLVIN 86 (169)
Q Consensus 73 ~~p-~~~~~~~~~~~ 86 (169)
..+ ..++-+-|+..
T Consensus 144 ~lkfsaLIGiDPV~G 158 (307)
T PF07224_consen 144 SLKFSALIGIDPVAG 158 (307)
T ss_pred cCchhheecccccCC
Confidence 223 55555555443
No 147
>COG3150 Predicted esterase [General function prediction only]
Probab=97.61 E-value=0.00024 Score=47.88 Aligned_cols=69 Identities=12% Similarity=0.002 Sum_probs=53.6
Q ss_pred EEeCCCCCCCCCCCCCCChhhHHHHHHHHHHhcCCCCceEEEEEcchHHHH-HHhhccccCCCcceEEEEeecchh
Q 044659 13 LTFDRTGYGESDPKPKRPVKIEAFDIQELANQLNLGHKFDVIGISILTYLF-GLVSNAHHTGIPAGVALVVLVINY 87 (169)
Q Consensus 13 ~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~ia-~~~~~~~~~~~p~~~~~~~~~~~~ 87 (169)
+..|.|-.+-+.+.+.......++.++.++...+. ..+.|+|-|+||+.| +++. .+....|++.|....
T Consensus 24 ~~~~~~~i~y~~p~l~h~p~~a~~ele~~i~~~~~-~~p~ivGssLGGY~At~l~~-----~~Girav~~NPav~P 93 (191)
T COG3150 24 IDEDVRDIEYSTPHLPHDPQQALKELEKAVQELGD-ESPLIVGSSLGGYYATWLGF-----LCGIRAVVFNPAVRP 93 (191)
T ss_pred HhccccceeeecCCCCCCHHHHHHHHHHHHHHcCC-CCceEEeecchHHHHHHHHH-----HhCChhhhcCCCcCc
Confidence 33455555556666666688888899999999986 679999999999999 8888 777777778876654
No 148
>PF05990 DUF900: Alpha/beta hydrolase of unknown function (DUF900); InterPro: IPR010297 This domain is associated with proteins of unknown function, which are hydrolase-like.
Probab=97.61 E-value=0.00018 Score=51.77 Aligned_cols=56 Identities=9% Similarity=0.169 Sum_probs=38.5
Q ss_pred EEEEeCCCCCCCCCCCC--CCChhhHHHHHHHHHHhc----CCCCceEEEEEcchHHHH-HHhh
Q 044659 11 YVLTFDRTGYGESDPKP--KRPVKIEAFDIQELANQL----NLGHKFDVIGISILTYLF-GLVS 67 (169)
Q Consensus 11 ~v~~~d~~G~G~s~~~~--~~~~~~~~~~~~~~~~~~----~~~~~~~l~G~S~Gg~ia-~~~~ 67 (169)
.++.|.||+.|.-.... ..+.......+.++++.+ +. ++|+|++||||+.+. .++.
T Consensus 50 ~~i~FsWPS~g~~~~Y~~d~~~a~~s~~~l~~~L~~L~~~~~~-~~I~ilaHSMG~rv~~~aL~ 112 (233)
T PF05990_consen 50 VVILFSWPSDGSLLGYFYDRESARFSGPALARFLRDLARAPGI-KRIHILAHSMGNRVLLEALR 112 (233)
T ss_pred eEEEEEcCCCCChhhhhhhhhhHHHHHHHHHHHHHHHHhccCC-ceEEEEEeCchHHHHHHHHH
Confidence 79999999998643221 112334445555555554 34 799999999999999 6665
No 149
>PRK10439 enterobactin/ferric enterobactin esterase; Provisional
Probab=97.59 E-value=0.0042 Score=48.50 Aligned_cols=111 Identities=11% Similarity=0.032 Sum_probs=58.7
Q ss_pred HHHHHHHHHHhc-CC---CCceEEEEEcchHHHH-HHhhccccCCCc---ceEEEEeecchhhhhhhcccchhHHHHHHH
Q 044659 34 EAFDIQELANQL-NL---GHKFDVIGISILTYLF-GLVSNAHHTGIP---AGVALVVLVINYCITCRLQGAHESLHRDIM 105 (169)
Q Consensus 34 ~~~~~~~~~~~~-~~---~~~~~l~G~S~Gg~ia-~~~~~~~~~~~p---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 105 (169)
..+++.-.+++. .. .++.+|.|+||||..| .++. .+| ..++.+++.. +|..........+.....
T Consensus 269 l~~eLlP~I~~~y~~~~d~~~~~IaG~S~GGl~AL~~al-----~~Pd~Fg~v~s~Sgs~--ww~~~~~~~~~~l~~~l~ 341 (411)
T PRK10439 269 VQQELLPQVRAIAPFSDDADRTVVAGQSFGGLAALYAGL-----HWPERFGCVLSQSGSF--WWPHRGGQQEGVLLEQLK 341 (411)
T ss_pred HHHHHHHHHHHhCCCCCCccceEEEEEChHHHHHHHHHH-----hCcccccEEEEeccce--ecCCccCCchhHHHHHHH
Confidence 345555555543 21 1568999999999999 8888 788 5555666532 222110000010111100
Q ss_pred HHhcCCCCCchhhhccCCCCCCceEEEEeCCCCcchH-HHHHHHhC----CCcEEEEecCCCcee
Q 044659 106 VHLGTWEFDPMEMENQFPNNEESVYLCQGHKDKLVPF-HRYRAKKL----PRIRYHEGSAGGHLM 165 (169)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~P~l~~~g~~D~~v~~-~~~~~~~~----~~~~~~~~~~~gH~~ 165 (169)
. .........+.+-.|+.|...-. .+.+.+.+ -+.++.+++| ||..
T Consensus 342 ~-------------~~~~~~~lr~~i~~G~~E~~~~~~~~~l~~~L~~~G~~~~~~~~~G-GHd~ 392 (411)
T PRK10439 342 A-------------GEVSARGLRIVLEAGRREPMIMRANQALYAQLHPAGHSVFWRQVDG-GHDA 392 (411)
T ss_pred h-------------cccCCCCceEEEeCCCCCchHHHHHHHHHHHHHHCCCcEEEEECCC-CcCH
Confidence 0 00111122377778988855433 33333333 3578899988 8963
No 150
>PTZ00472 serine carboxypeptidase (CBP1); Provisional
Probab=97.51 E-value=0.00031 Score=55.55 Aligned_cols=57 Identities=18% Similarity=0.141 Sum_probs=41.9
Q ss_pred cEEEEeCCC-CCCCCCCCCC---CChhhHHHHHHHHHHhc-------CCCCceEEEEEcchHHHH-HHhh
Q 044659 10 VYVLTFDRT-GYGESDPKPK---RPVKIEAFDIQELANQL-------NLGHKFDVIGISILTYLF-GLVS 67 (169)
Q Consensus 10 ~~v~~~d~~-G~G~s~~~~~---~~~~~~~~~~~~~~~~~-------~~~~~~~l~G~S~Gg~ia-~~~~ 67 (169)
.+++.+|.| |+|.|..... .+.++.++|+.++++.+ +. .+++|+|+|+||..+ .++.
T Consensus 122 ~~~l~iDqP~G~G~S~~~~~~~~~~~~~~a~d~~~~l~~f~~~~p~~~~-~~~~i~GeSygG~y~p~~a~ 190 (462)
T PTZ00472 122 AYVIYVDQPAGVGFSYADKADYDHNESEVSEDMYNFLQAFFGSHEDLRA-NDLFVVGESYGGHYAPATAY 190 (462)
T ss_pred cCeEEEeCCCCcCcccCCCCCCCCChHHHHHHHHHHHHHHHHhCccccC-CCEEEEeecchhhhHHHHHH
Confidence 788999975 8888854322 23567788887777643 23 689999999999999 6655
No 151
>PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C.
Probab=97.48 E-value=0.0003 Score=55.17 Aligned_cols=68 Identities=19% Similarity=0.218 Sum_probs=48.7
Q ss_pred hhhhhcCcEEEEeCCCCCCCCCCCCC--------CChhhHHHHHHHHHHhcC------CCCceEEEEEcchHHHH-HHhh
Q 044659 3 DFMDELGVYVLTFDRTGYGESDPKPK--------RPVKIEAFDIQELANQLN------LGHKFDVIGISILTYLF-GLVS 67 (169)
Q Consensus 3 ~~l~~~g~~v~~~d~~G~G~s~~~~~--------~~~~~~~~~~~~~~~~~~------~~~~~~l~G~S~Gg~ia-~~~~ 67 (169)
+++++.|=-+++.++|-||.|.|... -+.++...|+..++++++ .+.|++++|-|.||.+| ++-.
T Consensus 53 ~lA~~~~a~~v~lEHRyYG~S~P~~~~s~~nL~yLt~~QALaD~a~F~~~~~~~~~~~~~~pwI~~GgSY~G~Laaw~r~ 132 (434)
T PF05577_consen 53 ELAKEFGALVVALEHRYYGKSQPFGDLSTENLRYLTSEQALADLAYFIRYVKKKYNTAPNSPWIVFGGSYGGALAAWFRL 132 (434)
T ss_dssp HHHHHHTEEEEEE--TTSTTB-TTGGGGGSTTTC-SHHHHHHHHHHHHHHHHHHTTTGCC--EEEEEETHHHHHHHHHHH
T ss_pred HHHHHcCCcEEEeehhhhcCCCCccccchhhHHhcCHHHHHHHHHHHHHHHHHhhcCCCCCCEEEECCcchhHHHHHHHh
Confidence 45677789999999999999976432 137777788888776653 12579999999999999 8888
Q ss_pred ccccCCCc
Q 044659 68 NAHHTGIP 75 (169)
Q Consensus 68 ~~~~~~~p 75 (169)
++|
T Consensus 133 -----kyP 135 (434)
T PF05577_consen 133 -----KYP 135 (434)
T ss_dssp -----H-T
T ss_pred -----hCC
Confidence 888
No 152
>PF03403 PAF-AH_p_II: Platelet-activating factor acetylhydrolase, isoform II; PDB: 3F98_B 3F97_B 3D59_A 3F96_A 3D5E_B 3F9C_A.
Probab=97.47 E-value=0.00012 Score=56.33 Aligned_cols=84 Identities=8% Similarity=-0.056 Sum_probs=42.4
Q ss_pred CceEEEEEcchHHHH-HHhhccccCCCc-ceEEEEeecchhhhhhhcccchhHHHHHHHHHhcCCCCCchhhhccCCCCC
Q 044659 49 HKFDVIGISILTYLF-GLVSNAHHTGIP-AGVALVVLVINYCITCRLQGAHESLHRDIMVHLGTWEFDPMEMENQFPNNE 126 (169)
Q Consensus 49 ~~~~l~G~S~Gg~ia-~~~~~~~~~~~p-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 126 (169)
+++.++|||+||..+ .++.+ ..+ +..+++-+.... +.. .....++
T Consensus 228 ~~i~~~GHSFGGATa~~~l~~----d~r~~~~I~LD~W~~P------------l~~-----------------~~~~~i~ 274 (379)
T PF03403_consen 228 SRIGLAGHSFGGATALQALRQ----DTRFKAGILLDPWMFP------------LGD-----------------EIYSKIP 274 (379)
T ss_dssp EEEEEEEETHHHHHHHHHHHH-----TT--EEEEES---TT------------S-G-----------------GGGGG--
T ss_pred hheeeeecCchHHHHHHHHhh----ccCcceEEEeCCcccC------------CCc-----------------ccccCCC
Confidence 469999999999999 66651 323 444443331110 000 0112345
Q ss_pred CceEEEEeCCCCcchH-H---HHHHHhCCCcEEEEecCCCceee
Q 044659 127 ESVYLCQGHKDKLVPF-H---RYRAKKLPRIRYHEGSAGGHLMI 166 (169)
Q Consensus 127 ~P~l~~~g~~D~~v~~-~---~~~~~~~~~~~~~~~~~~gH~~~ 166 (169)
.|+|++.++.=. ... . +.+....++..++++.|+.|.-+
T Consensus 275 ~P~L~InSe~f~-~~~~~~~~~~~~~~~~~~~~~ti~gt~H~s~ 317 (379)
T PF03403_consen 275 QPLLFINSESFQ-WWENIFRMKKVISNNKESRMLTIKGTAHLSF 317 (379)
T ss_dssp S-EEEEEETTT---HHHHHHHHTT--TTS-EEEEEETT--GGGG
T ss_pred CCEEEEECcccC-ChhhHHHHHHHhccCCCcEEEEECCCcCCCc
Confidence 669999988632 222 2 22333445678999999999865
No 153
>KOG3101 consensus Esterase D [General function prediction only]
Probab=97.43 E-value=0.00059 Score=47.89 Aligned_cols=103 Identities=13% Similarity=0.134 Sum_probs=55.5
Q ss_pred CceEEEEEcchHHHH-HHhhccccCCCc---ceEEEEeecchhh---h--hhhcccchhHHHHHHHHHhcCCC-CCchhh
Q 044659 49 HKFDVIGISILTYLF-GLVSNAHHTGIP---AGVALVVLVINYC---I--TCRLQGAHESLHRDIMVHLGTWE-FDPMEM 118 (169)
Q Consensus 49 ~~~~l~G~S~Gg~ia-~~~~~~~~~~~p---~~~~~~~~~~~~~---~--~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 118 (169)
.++.|.||||||.=| ..+. +.| +++...+|..+.. | ..+.-.-.+ ....|. ++...+
T Consensus 141 ~k~~IfGHSMGGhGAl~~~L-----kn~~kykSvSAFAPI~NP~~cpWGqKAf~gYLG~--------~ka~W~~yDat~l 207 (283)
T KOG3101|consen 141 LKVGIFGHSMGGHGALTIYL-----KNPSKYKSVSAFAPICNPINCPWGQKAFTGYLGD--------NKAQWEAYDATHL 207 (283)
T ss_pred hhcceeccccCCCceEEEEE-----cCcccccceeccccccCcccCcchHHHhhcccCC--------ChHHHhhcchHHH
Confidence 579999999999999 5555 445 6666666665531 1 111100000 011231 222233
Q ss_pred hccCCCCCCceEEEEeCCCCcchH---HHHHHHhCC-----CcEEEEecCCCce
Q 044659 119 ENQFPNNEESVYLCQGHKDKLVPF---HRYRAKKLP-----RIRYHEGSAGGHL 164 (169)
Q Consensus 119 ~~~~~~~~~P~l~~~g~~D~~v~~---~~~~~~~~~-----~~~~~~~~~~gH~ 164 (169)
-.......--+||=+|+.|.+.+. -+.+.+... ...++..+|=.|-
T Consensus 208 ik~y~~~~~~ilIdqG~~D~Fl~~qLlPe~l~~a~~~~~~~~v~~r~~~gyDHS 261 (283)
T KOG3101|consen 208 IKNYRGVGDDILIDQGAADNFLAEQLLPENLLEACKATWQAPVVFRLQEGYDHS 261 (283)
T ss_pred HHhcCCCCccEEEecCccchhhhhhcChHHHHHHhhccccccEEEEeecCCCcc
Confidence 223444444489999999999885 333333332 2445555666664
No 154
>PF01764 Lipase_3: Lipase (class 3); InterPro: IPR002921 Triglyceride lipases are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. This family of lipases have been called Class 3 as they are not closely related to other lipase families.; GO: 0004806 triglyceride lipase activity, 0006629 lipid metabolic process; PDB: 1LGY_A 1DTE_A 1DT5_F 4DYH_B 1DU4_C 4EA6_B 1GT6_B 1EIN_A 1DT3_A 1TIB_A ....
Probab=97.42 E-value=0.00034 Score=45.98 Aligned_cols=34 Identities=15% Similarity=-0.033 Sum_probs=24.4
Q ss_pred hHHHHHHHHHHhcCCCCceEEEEEcchHHHH-HHhh
Q 044659 33 IEAFDIQELANQLNLGHKFDVIGISILTYLF-GLVS 67 (169)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~ia-~~~~ 67 (169)
...+.+.++.++.+. .++++.|||+||.+| .++.
T Consensus 49 ~~~~~l~~~~~~~~~-~~i~itGHSLGGalA~l~a~ 83 (140)
T PF01764_consen 49 QILDALKELVEKYPD-YSIVITGHSLGGALASLAAA 83 (140)
T ss_dssp HHHHHHHHHHHHSTT-SEEEEEEETHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcccC-ccchhhccchHHHHHHHHHH
Confidence 334455555555554 689999999999999 6655
No 155
>COG2936 Predicted acyl esterases [General function prediction only]
Probab=97.36 E-value=0.00046 Score=55.19 Aligned_cols=63 Identities=19% Similarity=0.192 Sum_probs=46.2
Q ss_pred hhhhcCcEEEEeCCCCCCCCCCCCCC--C--hhhHHHHHHHHHHhcCC-CCceEEEEEcchHHHH-HHhh
Q 044659 4 FMDELGVYVLTFDRTGYGESDPKPKR--P--VKIEAFDIQELANQLNL-GHKFDVIGISILTYLF-GLVS 67 (169)
Q Consensus 4 ~l~~~g~~v~~~d~~G~G~s~~~~~~--~--~~~~~~~~~~~~~~~~~-~~~~~l~G~S~Gg~ia-~~~~ 67 (169)
.+...||.|+..|.||.|.|++.-.. + .+|-.+-|+.+.+ +.. +.+|..+|.|++|... ++|+
T Consensus 75 ~~aa~GYavV~qDvRG~~~SeG~~~~~~~~E~~Dg~D~I~Wia~-QpWsNG~Vgm~G~SY~g~tq~~~Aa 143 (563)
T COG2936 75 WFAAQGYAVVNQDVRGRGGSEGVFDPESSREAEDGYDTIEWLAK-QPWSNGNVGMLGLSYLGFTQLAAAA 143 (563)
T ss_pred eeecCceEEEEecccccccCCcccceeccccccchhHHHHHHHh-CCccCCeeeeecccHHHHHHHHHHh
Confidence 56778999999999999999875322 2 4444444444444 443 3689999999999999 7777
No 156
>PF02450 LCAT: Lecithin:cholesterol acyltransferase; InterPro: IPR003386 Lecithin:cholesterol acyltransferase (LACT), also known as phosphatidylcholine-sterol acyltransferase (2.3.1.43 from EC), is involved in extracellular metabolism of plasma lipoproteins, including cholesterol. It esterifies the free cholesterol transported in plasma lipoproteins, and is activated by apolipoprotein A-I. Defects in LACT cause Norum and Fish eye diseases. This family also includes phospholipid:diacylglycerol acyltransferase (PDAT)(2.3.1.158 from EC), which is involved in triacylglycerol formation by an acyl-CoA independent pathway. The enzyme specifically transfers acyl groups from the sn-2 position of a phospholipid to diacylglycerol, thus forming an sn-1-lysophospholipid [].; GO: 0008374 O-acyltransferase activity, 0006629 lipid metabolic process
Probab=97.27 E-value=0.00037 Score=53.94 Aligned_cols=20 Identities=20% Similarity=0.175 Sum_probs=18.1
Q ss_pred CCceEEEEEcchHHHH-HHhh
Q 044659 48 GHKFDVIGISILTYLF-GLVS 67 (169)
Q Consensus 48 ~~~~~l~G~S~Gg~ia-~~~~ 67 (169)
+++++|+||||||.++ .++.
T Consensus 118 ~~kv~li~HSmGgl~~~~fl~ 138 (389)
T PF02450_consen 118 GKKVVLIAHSMGGLVARYFLQ 138 (389)
T ss_pred CCcEEEEEeCCCchHHHHHHH
Confidence 4799999999999999 7777
No 157
>PF04301 DUF452: Protein of unknown function (DUF452); InterPro: IPR007398 This is a family of uncharacterised proteins.
Probab=97.27 E-value=0.0027 Score=44.93 Aligned_cols=30 Identities=13% Similarity=0.210 Sum_probs=23.2
Q ss_pred CceEEEEEcchHHHH-HHhhccccCCCc-ceEEEEee
Q 044659 49 HKFDVIGISILTYLF-GLVSNAHHTGIP-AGVALVVL 83 (169)
Q Consensus 49 ~~~~l~G~S~Gg~ia-~~~~~~~~~~~p-~~~~~~~~ 83 (169)
+++.||++|||-++| .... ..| ...+.+.+
T Consensus 57 ~~i~lvAWSmGVw~A~~~l~-----~~~~~~aiAING 88 (213)
T PF04301_consen 57 REIYLVAWSMGVWAANRVLQ-----GIPFKRAIAING 88 (213)
T ss_pred ceEEEEEEeHHHHHHHHHhc-----cCCcceeEEEEC
Confidence 789999999999999 7766 556 55555554
No 158
>COG1075 LipA Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=97.23 E-value=0.00078 Score=51.14 Aligned_cols=61 Identities=16% Similarity=0.100 Sum_probs=43.2
Q ss_pred hhhcCcE---EEEeCCCCCCCCCCCCCCChhhHHHHHHHHHHhcCCCCceEEEEEcchHHHH-HHhh
Q 044659 5 MDELGVY---VLTFDRTGYGESDPKPKRPVKIEAFDIQELANQLNLGHKFDVIGISILTYLF-GLVS 67 (169)
Q Consensus 5 l~~~g~~---v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~ia-~~~~ 67 (169)
+.+.|+. +.++++++- ..........+.+...+++.+...+. +++.++||||||.++ .++.
T Consensus 82 ~~~~g~~~~~~~~~~~~~~-~~~~~~~~~~~ql~~~V~~~l~~~ga-~~v~LigHS~GG~~~ry~~~ 146 (336)
T COG1075 82 LAILGWLTNGVYAFELSGG-DGTYSLAVRGEQLFAYVDEVLAKTGA-KKVNLIGHSMGGLDSRYYLG 146 (336)
T ss_pred hcchHHHhccccccccccc-CCCccccccHHHHHHHHHHHHhhcCC-CceEEEeecccchhhHHHHh
Confidence 4445555 677777755 12212222366777778888888887 899999999999999 8887
No 159
>PF00151 Lipase: Lipase; InterPro: IPR013818 Triglyceride lipases (3.1.1.3 from EC) are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. At least three tissue-specific isozymes exist in higher vertebrates, pancreatic, hepatic and gastric/lingual. These lipases are closely related to each other and to lipoprotein lipase (3.1.1.34 from EC), which hydrolyses triglycerides of chylomicrons and very low density lipoproteins (VLDL) []. The most conserved region in all these proteins is centred around a serine residue which has been shown [] to participate, with an histidine and an aspartic acid residue, in a charge relay system. Such a region is also present in lipases of prokaryotic origin and in lecithin-cholesterol acyltransferase (2.3.1.43 from EC) (LCAT) [], which catalyzes fatty acid transfer between phosphatidylcholine and cholesterol.; PDB: 1LPB_B 1LPA_B 1N8S_A 1GPL_A 1W52_X 2PVS_B 2OXE_B 1BU8_A 2PPL_A 1ETH_A ....
Probab=97.20 E-value=0.00016 Score=54.67 Aligned_cols=78 Identities=9% Similarity=0.027 Sum_probs=40.1
Q ss_pred cCcEEEEeCCCCCCCCCCCCC--CChhhHHHHHHHHHH----hcCCC-CceEEEEEcchHHHH-HHhhccccCCCc-ceE
Q 044659 8 LGVYVLTFDRTGYGESDPKPK--RPVKIEAFDIQELAN----QLNLG-HKFDVIGISILTYLF-GLVSNAHHTGIP-AGV 78 (169)
Q Consensus 8 ~g~~v~~~d~~G~G~s~~~~~--~~~~~~~~~~~~~~~----~~~~~-~~~~l~G~S~Gg~ia-~~~~~~~~~~~p-~~~ 78 (169)
.+++||++||...-.. .... .........+..++. ..+.. ++++|||||+||.|| .+....+. ... ..+
T Consensus 103 ~d~NVI~VDWs~~a~~-~Y~~a~~n~~~vg~~la~~l~~L~~~~g~~~~~ihlIGhSLGAHvaG~aG~~~~~-~~ki~rI 180 (331)
T PF00151_consen 103 GDYNVIVVDWSRGASN-NYPQAVANTRLVGRQLAKFLSFLINNFGVPPENIHLIGHSLGAHVAGFAGKYLKG-GGKIGRI 180 (331)
T ss_dssp S-EEEEEEE-HHHHSS--HHHHHHHHHHHHHHHHHHHHHHHHHH---GGGEEEEEETCHHHHHHHHHHHTTT----SSEE
T ss_pred CCceEEEEcchhhccc-cccchhhhHHHHHHHHHHHHHHHHhhcCCChhHEEEEeeccchhhhhhhhhhccC-cceeeEE
Confidence 5899999999744321 1100 012333333333333 33321 789999999999999 66662222 112 566
Q ss_pred EEEeecchh
Q 044659 79 ALVVLVINY 87 (169)
Q Consensus 79 ~~~~~~~~~ 87 (169)
..+-|+.+.
T Consensus 181 tgLDPAgP~ 189 (331)
T PF00151_consen 181 TGLDPAGPL 189 (331)
T ss_dssp EEES-B-TT
T ss_pred EecCccccc
Confidence 667676664
No 160
>PF05057 DUF676: Putative serine esterase (DUF676); InterPro: IPR007751 This domain, whose function is unknown, is found within a group of putative lipases.
Probab=97.18 E-value=0.00045 Score=49.16 Aligned_cols=35 Identities=20% Similarity=0.093 Sum_probs=23.0
Q ss_pred hHHHHHHHHHHhcCCC-CceEEEEEcchHHHH-HHhh
Q 044659 33 IEAFDIQELANQLNLG-HKFDVIGISILTYLF-GLVS 67 (169)
Q Consensus 33 ~~~~~~~~~~~~~~~~-~~~~l~G~S~Gg~ia-~~~~ 67 (169)
..++++.+.++..... .++.+|||||||.++ .++.
T Consensus 61 rL~~eI~~~~~~~~~~~~~IsfIgHSLGGli~r~al~ 97 (217)
T PF05057_consen 61 RLAEEILEHIKDYESKIRKISFIGHSLGGLIARYALG 97 (217)
T ss_pred HHHHHHHHhccccccccccceEEEecccHHHHHHHHH
Confidence 3344444444444431 489999999999999 6555
No 161
>KOG2183 consensus Prolylcarboxypeptidase (angiotensinase C) [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=97.09 E-value=0.0011 Score=50.81 Aligned_cols=69 Identities=23% Similarity=0.155 Sum_probs=51.9
Q ss_pred hhhhhhcCcEEEEeCCCCCCCCCCCCCC-----------ChhhHHHHHHHHHHhcCC-----CCceEEEEEcchHHHH-H
Q 044659 2 QDFMDELGVYVLTFDRTGYGESDPKPKR-----------PVKIEAFDIQELANQLNL-----GHKFDVIGISILTYLF-G 64 (169)
Q Consensus 2 ~~~l~~~g~~v~~~d~~G~G~s~~~~~~-----------~~~~~~~~~~~~~~~~~~-----~~~~~l~G~S~Gg~ia-~ 64 (169)
-+...+.+--+|-.+.|=||+|-+.... +.++...|..+++..++- ..+++.+|-|.||+++ +
T Consensus 104 ~D~Ap~~~AllVFaEHRyYGeS~PFG~~s~k~~~hlgyLtseQALADfA~ll~~lK~~~~a~~~pvIafGGSYGGMLaAW 183 (492)
T KOG2183|consen 104 WDLAPELKALLVFAEHRYYGESLPFGSQSYKDARHLGYLTSEQALADFAELLTFLKRDLSAEASPVIAFGGSYGGMLAAW 183 (492)
T ss_pred HhhhHhhCceEEEeehhccccCCCCcchhccChhhhccccHHHHHHHHHHHHHHHhhccccccCcEEEecCchhhHHHHH
Confidence 3455677788899999999999653221 156666677777776641 1579999999999999 8
Q ss_pred HhhccccCCCc
Q 044659 65 LVSNAHHTGIP 75 (169)
Q Consensus 65 ~~~~~~~~~~p 75 (169)
+-. ++|
T Consensus 184 fRl-----KYP 189 (492)
T KOG2183|consen 184 FRL-----KYP 189 (492)
T ss_pred HHh-----cCh
Confidence 888 888
No 162
>cd00741 Lipase Lipase. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation", the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=96.97 E-value=0.0016 Score=43.56 Aligned_cols=19 Identities=26% Similarity=-0.039 Sum_probs=17.0
Q ss_pred CceEEEEEcchHHHH-HHhh
Q 044659 49 HKFDVIGISILTYLF-GLVS 67 (169)
Q Consensus 49 ~~~~l~G~S~Gg~ia-~~~~ 67 (169)
.++.++|||+||.+| .++.
T Consensus 28 ~~i~v~GHSlGg~lA~l~a~ 47 (153)
T cd00741 28 YKIHVTGHSLGGALAGLAGL 47 (153)
T ss_pred CeEEEEEcCHHHHHHHHHHH
Confidence 789999999999999 6666
No 163
>PF10340 DUF2424: Protein of unknown function (DUF2424); InterPro: IPR019436 Sterol homeostasis in eukaryotic cells relies on the reciprocal interconversion of free sterols and steryl esters. In Saccharomyces cerevisiae (Baker's yeast) sterol acetylation requires the acetyltransferase Atf2, whereas deacetylation requires Say1, a membrane-anchored deacetylase with a putative active site in the ER lumen. Lack of Say1 results in the secretion of acetylated sterols into the culture medium, indicating that the substrate specificity of Say1 determines whether acetylated sterols are secreted from the cells or whether they are deacetylated and retained. In S. cerevisiae cells lacking Say1 or Atf2 are sensitive against the plant-derived allylbenzene eugenol and both Say1 and Atf2 affect pregnenolone toxicity, indicating that lipid acetylation acts as a detoxification pathway []. Homologues of Say1 are present in the mammalian genome and can functionally substitute for Say1 in yeast demonstrating that part of this pathway has been evolutionarily conserved [].
Probab=96.97 E-value=0.081 Score=40.72 Aligned_cols=77 Identities=13% Similarity=0.082 Sum_probs=49.2
Q ss_pred cEEEEeCCCCCCCC-CCCCCC-ChhhHHHHHHHHHHhcCCCCceEEEEEcchHHHH-HHhhcccc-C--CCcceEEEEee
Q 044659 10 VYVLTFDRTGYGES-DPKPKR-PVKIEAFDIQELANQLNLGHKFDVIGISILTYLF-GLVSNAHH-T--GIPAGVALVVL 83 (169)
Q Consensus 10 ~~v~~~d~~G~G~s-~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~ia-~~~~~~~~-~--~~p~~~~~~~~ 83 (169)
..+++.|+.--..- ...... .+.+..+-...+++..+- +.|+|+|-|.||-++ .++.-.+. . ..|+++++++|
T Consensus 155 ~SILvLDYsLt~~~~~~~~yPtQL~qlv~~Y~~Lv~~~G~-~nI~LmGDSAGGnL~Ls~LqyL~~~~~~~~Pk~~iLISP 233 (374)
T PF10340_consen 155 VSILVLDYSLTSSDEHGHKYPTQLRQLVATYDYLVESEGN-KNIILMGDSAGGNLALSFLQYLKKPNKLPYPKSAILISP 233 (374)
T ss_pred CeEEEEeccccccccCCCcCchHHHHHHHHHHHHHhccCC-CeEEEEecCccHHHHHHHHHHHhhcCCCCCCceeEEECC
Confidence 36677776644300 011111 266666677778877776 799999999999999 44432121 1 23499999999
Q ss_pred cchh
Q 044659 84 VINY 87 (169)
Q Consensus 84 ~~~~ 87 (169)
....
T Consensus 234 Wv~l 237 (374)
T PF10340_consen 234 WVNL 237 (374)
T ss_pred CcCC
Confidence 7664
No 164
>COG1770 PtrB Protease II [Amino acid transport and metabolism]
Probab=96.87 E-value=0.023 Score=46.25 Aligned_cols=148 Identities=16% Similarity=0.100 Sum_probs=80.6
Q ss_pred hhhcCcEEEEeCCCCCCCCCC---------CCCCChhhHHHHHHHHHHhcC-CCCceEEEEEcchHHHH-HHhhccccCC
Q 044659 5 MDELGVYVLTFDRTGYGESDP---------KPKRPVKIEAFDIQELANQLN-LGHKFDVIGISILTYLF-GLVSNAHHTG 73 (169)
Q Consensus 5 l~~~g~~v~~~d~~G~G~s~~---------~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~G~S~Gg~ia-~~~~~~~~~~ 73 (169)
|..+||-.-...-||-|.-.. .+.+++.|..+-.+.+++.-- ..+.++++|-|.||+++ +.++ .
T Consensus 473 LlDRGfiyAIAHVRGGgelG~~WYe~GK~l~K~NTf~DFIa~a~~Lv~~g~~~~~~i~a~GGSAGGmLmGav~N-----~ 547 (682)
T COG1770 473 LLDRGFVYAIAHVRGGGELGRAWYEDGKLLNKKNTFTDFIAAARHLVKEGYTSPDRIVAIGGSAGGMLMGAVAN-----M 547 (682)
T ss_pred eecCceEEEEEEeecccccChHHHHhhhhhhccccHHHHHHHHHHHHHcCcCCccceEEeccCchhHHHHHHHh-----h
Confidence 345566666666777665421 123347777666566554432 22679999999999999 8887 7
Q ss_pred Cc---ceEEEEeecchhhhhhhcc----c--chhHH-------HHHHHHHhcCCCCCchhhhccCCCCCCceEEEEeCCC
Q 044659 74 IP---AGVALVVLVINYCITCRLQ----G--AHESL-------HRDIMVHLGTWEFDPMEMENQFPNNEESVYLCQGHKD 137 (169)
Q Consensus 74 ~p---~~~~~~~~~~~~~~~~~~~----~--~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~g~~D 137 (169)
.| .+++.-.|+.......... + ..+.| ..++...+.++..- -.+.-.|+|++.|.+|
T Consensus 548 ~P~lf~~iiA~VPFVDvltTMlD~slPLT~~E~~EWGNP~d~e~y~yikSYSPYdNV-------~a~~YP~ilv~~Gl~D 620 (682)
T COG1770 548 APDLFAGIIAQVPFVDVLTTMLDPSLPLTVTEWDEWGNPLDPEYYDYIKSYSPYDNV-------EAQPYPAILVTTGLND 620 (682)
T ss_pred ChhhhhheeecCCccchhhhhcCCCCCCCccchhhhCCcCCHHHHHHHhhcCchhcc-------ccCCCCceEEEccccC
Confidence 77 6666666655432111100 0 00001 11122222222111 1122335999999999
Q ss_pred CcchH---HHHHHHhCC---Cc---EEEEecCCCce
Q 044659 138 KLVPF---HRYRAKKLP---RI---RYHEGSAGGHL 164 (169)
Q Consensus 138 ~~v~~---~~~~~~~~~---~~---~~~~~~~~gH~ 164 (169)
+-|.. +++.++.-. +. -+.+=.++||-
T Consensus 621 ~rV~YwEpAKWvAkLR~~~td~~plLlkt~M~aGHg 656 (682)
T COG1770 621 PRVQYWEPAKWVAKLRELKTDGNPLLLKTNMDAGHG 656 (682)
T ss_pred CccccchHHHHHHHHhhcccCCCcEEEEecccccCC
Confidence 99999 555554332 22 23333578994
No 165
>KOG2237 consensus Predicted serine protease [Posttranslational modification, protein turnover, chaperones]
Probab=96.86 E-value=0.0074 Score=48.84 Aligned_cols=65 Identities=15% Similarity=0.030 Sum_probs=44.5
Q ss_pred hhcCcEEEEeCCCCCCCCCCC--C-------CCChhhHHHHHHHHHHhcC-CCCceEEEEEcchHHHH-HHhhccccCCC
Q 044659 6 DELGVYVLTFDRTGYGESDPK--P-------KRPVKIEAFDIQELANQLN-LGHKFDVIGISILTYLF-GLVSNAHHTGI 74 (169)
Q Consensus 6 ~~~g~~v~~~d~~G~G~s~~~--~-------~~~~~~~~~~~~~~~~~~~-~~~~~~l~G~S~Gg~ia-~~~~~~~~~~~ 74 (169)
...|+.....+.||-|+-... . .+++.|...-++.++++-- ..++..+.|.|.||.++ ++.+ ..
T Consensus 496 ld~G~Vla~a~VRGGGe~G~~WHk~G~lakKqN~f~Dfia~AeyLve~gyt~~~kL~i~G~SaGGlLvga~iN-----~r 570 (712)
T KOG2237|consen 496 LDRGWVLAYANVRGGGEYGEQWHKDGRLAKKQNSFDDFIACAEYLVENGYTQPSKLAIEGGSAGGLLVGACIN-----QR 570 (712)
T ss_pred EecceEEEEEeeccCcccccchhhccchhhhcccHHHHHHHHHHHHHcCCCCccceeEecccCccchhHHHhc-----cC
Confidence 347888888999998764321 1 1225555555555555432 22689999999999999 7777 77
Q ss_pred c
Q 044659 75 P 75 (169)
Q Consensus 75 p 75 (169)
|
T Consensus 571 P 571 (712)
T KOG2237|consen 571 P 571 (712)
T ss_pred c
Confidence 8
No 166
>KOG3975 consensus Uncharacterized conserved protein [Function unknown]
Probab=96.68 E-value=0.038 Score=39.97 Aligned_cols=41 Identities=20% Similarity=0.313 Sum_probs=31.5
Q ss_pred CCceEEEEeCCCCcchH--HHHHHHhCCCcEEEEe-cCCCceee
Q 044659 126 EESVYLCQGHKDKLVPF--HRYRAKKLPRIRYHEG-SAGGHLMI 166 (169)
Q Consensus 126 ~~P~l~~~g~~D~~v~~--~~~~~~~~~~~~~~~~-~~~gH~~~ 166 (169)
.+-+.+.+|..|..+|. .+.+.+.+|..+...- ++.-|.+-
T Consensus 242 ~d~l~Fyygt~DgW~p~~~~d~~kdd~~eed~~Ldedki~HAFV 285 (301)
T KOG3975|consen 242 LDSLWFYYGTNDGWVPSHYYDYYKDDVPEEDLKLDEDKIPHAFV 285 (301)
T ss_pred CcEEEEEccCCCCCcchHHHHHHhhhcchhceeeccccCCccee
Confidence 34488999999999999 8999999996554432 57777654
No 167
>cd00519 Lipase_3 Lipase (class 3). Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=96.66 E-value=0.0029 Score=45.25 Aligned_cols=19 Identities=32% Similarity=0.037 Sum_probs=16.6
Q ss_pred CceEEEEEcchHHHH-HHhh
Q 044659 49 HKFDVIGISILTYLF-GLVS 67 (169)
Q Consensus 49 ~~~~l~G~S~Gg~ia-~~~~ 67 (169)
.++.+.|||+||.+| .++.
T Consensus 128 ~~i~vtGHSLGGaiA~l~a~ 147 (229)
T cd00519 128 YKIIVTGHSLGGALASLLAL 147 (229)
T ss_pred ceEEEEccCHHHHHHHHHHH
Confidence 689999999999999 6555
No 168
>PF11288 DUF3089: Protein of unknown function (DUF3089); InterPro: IPR021440 This family of proteins has no known function.
Probab=96.64 E-value=0.0049 Score=43.40 Aligned_cols=37 Identities=16% Similarity=0.063 Sum_probs=32.5
Q ss_pred hhhHHHHHHHHHHhcCCCCceEEEEEcchHHHH-HHhh
Q 044659 31 VKIEAFDIQELANQLNLGHKFDVIGISILTYLF-GLVS 67 (169)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~ia-~~~~ 67 (169)
..|..+-++..+++.+.+.+++|+|||.|+.+. .++.
T Consensus 77 y~DV~~AF~~yL~~~n~GRPfILaGHSQGs~~l~~LL~ 114 (207)
T PF11288_consen 77 YSDVRAAFDYYLANYNNGRPFILAGHSQGSMHLLRLLK 114 (207)
T ss_pred HHHHHHHHHHHHHhcCCCCCEEEEEeChHHHHHHHHHH
Confidence 778888888899999877899999999999999 6666
No 169
>KOG3253 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=96.60 E-value=0.0054 Score=49.38 Aligned_cols=42 Identities=17% Similarity=0.237 Sum_probs=34.9
Q ss_pred CCCceEEEEeCCCCcchH--HHHHHHhCC-CcEEEEecCCCceee
Q 044659 125 NEESVYLCQGHKDKLVPF--HRYRAKKLP-RIRYHEGSAGGHLMI 166 (169)
Q Consensus 125 ~~~P~l~~~g~~D~~v~~--~~~~~~~~~-~~~~~~~~~~gH~~~ 166 (169)
.+.|+|||.|.+|...++ .+.+.++.. ..+++++.+++|-+-
T Consensus 303 mk~PVLFV~Gsnd~mcspn~ME~vreKMqA~~elhVI~~adhsma 347 (784)
T KOG3253|consen 303 MKQPVLFVIGSNDHMCSPNSMEEVREKMQAEVELHVIGGADHSMA 347 (784)
T ss_pred cCCceEEEecCCcccCCHHHHHHHHHHhhccceEEEecCCCcccc
Confidence 344499999999999999 888888775 478999999999763
No 170
>PLN02517 phosphatidylcholine-sterol O-acyltransferase
Probab=96.60 E-value=0.005 Score=49.70 Aligned_cols=20 Identities=25% Similarity=0.333 Sum_probs=17.5
Q ss_pred CCceEEEEEcchHHHH-HHhh
Q 044659 48 GHKFDVIGISILTYLF-GLVS 67 (169)
Q Consensus 48 ~~~~~l~G~S~Gg~ia-~~~~ 67 (169)
++|++|+||||||.++ .++.
T Consensus 212 gkKVVLV~HSMGglv~lyFL~ 232 (642)
T PLN02517 212 GKKVVVVPHSMGVLYFLHFMK 232 (642)
T ss_pred CCeEEEEEeCCchHHHHHHHH
Confidence 3799999999999999 7665
No 171
>COG3509 LpqC Poly(3-hydroxybutyrate) depolymerase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=96.57 E-value=0.018 Score=42.54 Aligned_cols=78 Identities=23% Similarity=0.223 Sum_probs=47.1
Q ss_pred hhhhhcCcEEEEeCCC-------CCCCCC-CCCCCChhhHHHHHHHHH----HhcCCC-CceEEEEEcchHHHH-HHhhc
Q 044659 3 DFMDELGVYVLTFDRT-------GYGESD-PKPKRPVKIEAFDIQELA----NQLNLG-HKFDVIGISILTYLF-GLVSN 68 (169)
Q Consensus 3 ~~l~~~g~~v~~~d~~-------G~G~s~-~~~~~~~~~~~~~~~~~~----~~~~~~-~~~~l~G~S~Gg~ia-~~~~~ 68 (169)
+++.+.||-|+.||-. |++.+. +.+...-.+.+..|.+++ ...+++ ++|++.|.|-||.++ .+++
T Consensus 85 ~lAd~~gFlV~yPdg~~~~wn~~~~~~~~~p~~~~~g~ddVgflr~lva~l~~~~gidp~RVyvtGlS~GG~Ma~~lac- 163 (312)
T COG3509 85 ALADREGFLVAYPDGYDRAWNANGCGNWFGPADRRRGVDDVGFLRALVAKLVNEYGIDPARVYVTGLSNGGRMANRLAC- 163 (312)
T ss_pred hhhcccCcEEECcCccccccCCCcccccCCcccccCCccHHHHHHHHHHHHHHhcCcCcceEEEEeeCcHHHHHHHHHh-
Confidence 4556779999999532 222221 111122223333444444 444552 589999999999999 9999
Q ss_pred cccCCCc---ceEEEEeecc
Q 044659 69 AHHTGIP---AGVALVVLVI 85 (169)
Q Consensus 69 ~~~~~~p---~~~~~~~~~~ 85 (169)
.+| .++.+++...
T Consensus 164 ----~~p~~faa~A~VAg~~ 179 (312)
T COG3509 164 ----EYPDIFAAIAPVAGLL 179 (312)
T ss_pred ----cCcccccceeeeeccc
Confidence 777 5555655433
No 172
>COG4782 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=96.53 E-value=0.0039 Score=47.18 Aligned_cols=57 Identities=12% Similarity=0.046 Sum_probs=35.6
Q ss_pred cEEEEeCCCCCCCCCCCC------CCChhhHHHHHHHHHHhcCCCCceEEEEEcchHHHH-HHhh
Q 044659 10 VYVLTFDRTGYGESDPKP------KRPVKIEAFDIQELANQLNLGHKFDVIGISILTYLF-GLVS 67 (169)
Q Consensus 10 ~~v~~~d~~G~G~s~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~ia-~~~~ 67 (169)
...+.+.||-.|.--..- .++-..+...|..+.+.... ++|+|++||||.++. .++.
T Consensus 147 ~~pVvFSWPS~g~l~~Yn~DreS~~~Sr~aLe~~lr~La~~~~~-~~I~ilAHSMGtwl~~e~Lr 210 (377)
T COG4782 147 GVPVVFSWPSRGSLLGYNYDRESTNYSRPALERLLRYLATDKPV-KRIYLLAHSMGTWLLMEALR 210 (377)
T ss_pred cceEEEEcCCCCeeeecccchhhhhhhHHHHHHHHHHHHhCCCC-ceEEEEEecchHHHHHHHHH
Confidence 667889999777542211 11233333334444444456 789999999999999 5544
No 173
>PF05705 DUF829: Eukaryotic protein of unknown function (DUF829); InterPro: IPR008547 This signature identifies Transmembrane protein 53, that have no known function but are predicted to be integral membrane proteins.
Probab=96.50 E-value=0.065 Score=38.58 Aligned_cols=46 Identities=13% Similarity=0.138 Sum_probs=34.6
Q ss_pred CCCCCceEEEEeCCCCcchH--HHHHHHhCC----CcEEEEecCCCceeeec
Q 044659 123 PNNEESVYLCQGHKDKLVPF--HRYRAKKLP----RIRYHEGSAGGHLMIHE 168 (169)
Q Consensus 123 ~~~~~P~l~~~g~~D~~v~~--~~~~~~~~~----~~~~~~~~~~gH~~~~e 168 (169)
...++|.++++++.|.+++. .+...+... +++...++++.|..|+.
T Consensus 175 ~~~~~p~lylYS~~D~l~~~~~ve~~~~~~~~~G~~V~~~~f~~S~HV~H~r 226 (240)
T PF05705_consen 175 SPSRCPRLYLYSKADPLIPWRDVEEHAEEARRKGWDVRAEKFEDSPHVAHLR 226 (240)
T ss_pred CCCCCCeEEecCCCCcCcCHHHHHHHHHHHHHcCCeEEEecCCCCchhhhcc
Confidence 34678899999999999999 444433332 47788889999988763
No 174
>KOG2369 consensus Lecithin:cholesterol acyltransferase (LCAT)/Acyl-ceramide synthase [Lipid transport and metabolism]
Probab=96.45 E-value=0.0036 Score=48.88 Aligned_cols=36 Identities=11% Similarity=-0.031 Sum_probs=25.4
Q ss_pred hhhHHHHHHHHHHhcCCCCceEEEEEcchHHHH-HHhh
Q 044659 31 VKIEAFDIQELANQLNLGHKFDVIGISILTYLF-GLVS 67 (169)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~ia-~~~~ 67 (169)
+.+....|+...+.-+- +|++|++||||+.+. .++.
T Consensus 165 l~kLK~~iE~~~~~~G~-kkVvlisHSMG~l~~lyFl~ 201 (473)
T KOG2369|consen 165 LSKLKKKIETMYKLNGG-KKVVLISHSMGGLYVLYFLK 201 (473)
T ss_pred HHHHHHHHHHHHHHcCC-CceEEEecCCccHHHHHHHh
Confidence 44444444444444444 899999999999999 7776
No 175
>PLN02454 triacylglycerol lipase
Probab=96.45 E-value=0.0049 Score=47.74 Aligned_cols=30 Identities=20% Similarity=0.097 Sum_probs=20.7
Q ss_pred HHHHHHHhcCCCC--ceEEEEEcchHHHH-HHhh
Q 044659 37 DIQELANQLNLGH--KFDVIGISILTYLF-GLVS 67 (169)
Q Consensus 37 ~~~~~~~~~~~~~--~~~l~G~S~Gg~ia-~~~~ 67 (169)
.+.++++.... . +|++.|||+||.+| .++.
T Consensus 215 ~V~~l~~~Yp~-~~~sI~vTGHSLGGALAtLaA~ 247 (414)
T PLN02454 215 KIKELLERYKD-EKLSIVLTGHSLGASLATLAAF 247 (414)
T ss_pred HHHHHHHhCCC-CCceEEEEecCHHHHHHHHHHH
Confidence 34444444433 3 39999999999999 6664
No 176
>PLN02571 triacylglycerol lipase
Probab=96.41 E-value=0.0049 Score=47.76 Aligned_cols=36 Identities=11% Similarity=-0.018 Sum_probs=25.1
Q ss_pred hhHHHHHHHHHHhcCCC-CceEEEEEcchHHHH-HHhh
Q 044659 32 KIEAFDIQELANQLNLG-HKFDVIGISILTYLF-GLVS 67 (169)
Q Consensus 32 ~~~~~~~~~~~~~~~~~-~~~~l~G~S~Gg~ia-~~~~ 67 (169)
++...++.++++..... -++++.|||+||.+| .++.
T Consensus 208 ~qvl~eV~~L~~~y~~e~~sI~VTGHSLGGALAtLaA~ 245 (413)
T PLN02571 208 DQVLNEVGRLVEKYKDEEISITICGHSLGAALATLNAV 245 (413)
T ss_pred HHHHHHHHHHHHhcCcccccEEEeccchHHHHHHHHHH
Confidence 34455666666665431 268999999999999 6655
No 177
>COG1505 Serine proteases of the peptidase family S9A [Amino acid transport and metabolism]
Probab=96.41 E-value=0.022 Score=45.93 Aligned_cols=147 Identities=18% Similarity=0.112 Sum_probs=79.4
Q ss_pred hhhcCcEEEEeCCCCCCCCCCC---------CCCChhhHHHHHHHHHHhcC-CCCceEEEEEcchHHHH-HHhhccccCC
Q 044659 5 MDELGVYVLTFDRTGYGESDPK---------PKRPVKIEAFDIQELANQLN-LGHKFDVIGISILTYLF-GLVSNAHHTG 73 (169)
Q Consensus 5 l~~~g~~v~~~d~~G~G~s~~~---------~~~~~~~~~~~~~~~~~~~~-~~~~~~l~G~S~Gg~ia-~~~~~~~~~~ 73 (169)
..++|-..+....||-|+=.+. ..+.++|...-.+.++++-- ..+++.+.|-|-||.++ .++. .
T Consensus 446 WLerGg~~v~ANIRGGGEfGp~WH~Aa~k~nrq~vfdDf~AVaedLi~rgitspe~lgi~GgSNGGLLvg~alT-----Q 520 (648)
T COG1505 446 WLERGGVFVLANIRGGGEFGPEWHQAGMKENKQNVFDDFIAVAEDLIKRGITSPEKLGIQGGSNGGLLVGAALT-----Q 520 (648)
T ss_pred HHhcCCeEEEEecccCCccCHHHHHHHhhhcchhhhHHHHHHHHHHHHhCCCCHHHhhhccCCCCceEEEeeec-----c
Confidence 3455667778899998865331 11124444444444444321 12679999999999999 8887 7
Q ss_pred Cc---ceEEEEeecchhhhhhhccc-chhHHHHHH-----------HHHhcCC-CCCchhhhccCCCCCCceEEEEeCCC
Q 044659 74 IP---AGVALVVLVINYCITCRLQG-AHESLHRDI-----------MVHLGTW-EFDPMEMENQFPNNEESVYLCQGHKD 137 (169)
Q Consensus 74 ~p---~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-----------~~~~~~~-~~~~~~~~~~~~~~~~P~l~~~g~~D 137 (169)
.| .++++-.|...+. +++.- ...+|..++ ...+.++ ...+....+ |+||..+.+|
T Consensus 521 rPelfgA~v~evPllDMl--RYh~l~aG~sW~~EYG~Pd~P~d~~~l~~YSPy~nl~~g~kYP-------~~LITTs~~D 591 (648)
T COG1505 521 RPELFGAAVCEVPLLDML--RYHLLTAGSSWIAEYGNPDDPEDRAFLLAYSPYHNLKPGQKYP-------PTLITTSLHD 591 (648)
T ss_pred ChhhhCceeeccchhhhh--hhcccccchhhHhhcCCCCCHHHHHHHHhcCchhcCCccccCC-------CeEEEccccc
Confidence 78 4455556666542 22110 111122221 1111111 111111223 5999999987
Q ss_pred CcchH--HHHHHHhCCC----cEEEEecCCCcee
Q 044659 138 KLVPF--HRYRAKKLPR----IRYHEGSAGGHLM 165 (169)
Q Consensus 138 ~~v~~--~~~~~~~~~~----~~~~~~~~~gH~~ 165 (169)
.-|.| +++++..+.. .-+.+--++||..
T Consensus 592 DRVHPaHarKfaa~L~e~~~pv~~~e~t~gGH~g 625 (648)
T COG1505 592 DRVHPAHARKFAAKLQEVGAPVLLREETKGGHGG 625 (648)
T ss_pred ccccchHHHHHHHHHHhcCCceEEEeecCCcccC
Confidence 77777 6666555532 2333334779963
No 178
>COG3946 VirJ Type IV secretory pathway, VirJ component [Intracellular trafficking and secretion]
Probab=96.34 E-value=0.0064 Score=46.68 Aligned_cols=61 Identities=20% Similarity=0.147 Sum_probs=45.5
Q ss_pred hhhhhhcCcEEEEeCCCCCCCCCCCCCCChhhHHHHHHHHHHh----cCCCCceEEEEEcchHHHH-HHhh
Q 044659 2 QDFMDELGVYVLTFDRTGYGESDPKPKRPVKIEAFDIQELANQ----LNLGHKFDVIGISILTYLF-GLVS 67 (169)
Q Consensus 2 ~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~l~G~S~Gg~ia-~~~~ 67 (169)
.+.|++.|+.|+-.|-.=|=.|... .++.+.|+.++++. .+. +++.|+|+|+|+-+- .+.+
T Consensus 280 ~~~l~~~gvpVvGvdsLRYfW~~rt----Pe~~a~Dl~r~i~~y~~~w~~-~~~~liGySfGADvlP~~~n 345 (456)
T COG3946 280 AEALQKQGVPVVGVDSLRYFWSERT----PEQIAADLSRLIRFYARRWGA-KRVLLIGYSFGADVLPFAYN 345 (456)
T ss_pred HHHHHHCCCceeeeehhhhhhccCC----HHHHHHHHHHHHHHHHHhhCc-ceEEEEeecccchhhHHHHH
Confidence 4678899999999987766555544 44555666555554 555 789999999999999 7777
No 179
>COG2382 Fes Enterochelin esterase and related enzymes [Inorganic ion transport and metabolism]
Probab=96.28 E-value=0.01 Score=43.92 Aligned_cols=22 Identities=14% Similarity=-0.159 Sum_probs=19.4
Q ss_pred CceEEEEEcchHHHH-HHhhccccCCCc
Q 044659 49 HKFDVIGISILTYLF-GLVSNAHHTGIP 75 (169)
Q Consensus 49 ~~~~l~G~S~Gg~ia-~~~~~~~~~~~p 75 (169)
..=+|.|-|+||.++ .++. .+|
T Consensus 177 ~~r~L~G~SlGG~vsL~agl-----~~P 199 (299)
T COG2382 177 DGRVLAGDSLGGLVSLYAGL-----RHP 199 (299)
T ss_pred CCcEEeccccccHHHHHHHh-----cCc
Confidence 346899999999999 8888 889
No 180
>PLN02162 triacylglycerol lipase
Probab=96.25 E-value=0.0074 Score=47.36 Aligned_cols=32 Identities=13% Similarity=-0.022 Sum_probs=22.6
Q ss_pred HHHHHHHHHhcCCCCceEEEEEcchHHHH-HHhh
Q 044659 35 AFDIQELANQLNLGHKFDVIGISILTYLF-GLVS 67 (169)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~l~G~S~Gg~ia-~~~~ 67 (169)
.+.+.+++.+... .++++.|||+||.+| .++.
T Consensus 265 ~~~L~~lL~k~p~-~kliVTGHSLGGALAtLaAa 297 (475)
T PLN02162 265 RQMLRDKLARNKN-LKYILTGHSLGGALAALFPA 297 (475)
T ss_pred HHHHHHHHHhCCC-ceEEEEecChHHHHHHHHHH
Confidence 3444555555444 689999999999999 6543
No 181
>PLN02408 phospholipase A1
Probab=96.23 E-value=0.0076 Score=46.06 Aligned_cols=33 Identities=15% Similarity=0.023 Sum_probs=23.2
Q ss_pred HHHHHHHHHhcCCC-CceEEEEEcchHHHH-HHhh
Q 044659 35 AFDIQELANQLNLG-HKFDVIGISILTYLF-GLVS 67 (169)
Q Consensus 35 ~~~~~~~~~~~~~~-~~~~l~G~S~Gg~ia-~~~~ 67 (169)
.+++.++++..+.. .+|++.|||+||.+| .++.
T Consensus 185 l~eI~~ll~~y~~~~~sI~vTGHSLGGALAtLaA~ 219 (365)
T PLN02408 185 REEIARLLQSYGDEPLSLTITGHSLGAALATLTAY 219 (365)
T ss_pred HHHHHHHHHhcCCCCceEEEeccchHHHHHHHHHH
Confidence 34455566655431 359999999999999 6666
No 182
>PLN00413 triacylglycerol lipase
Probab=96.17 E-value=0.009 Score=46.99 Aligned_cols=33 Identities=21% Similarity=0.100 Sum_probs=24.8
Q ss_pred HHHHHHHHHHhcCCCCceEEEEEcchHHHH-HHhh
Q 044659 34 EAFDIQELANQLNLGHKFDVIGISILTYLF-GLVS 67 (169)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~l~G~S~Gg~ia-~~~~ 67 (169)
..+.+.+++++... .++++.|||+||.+| .++.
T Consensus 270 i~~~Lk~ll~~~p~-~kliVTGHSLGGALAtLaA~ 303 (479)
T PLN00413 270 ILRHLKEIFDQNPT-SKFILSGHSLGGALAILFTA 303 (479)
T ss_pred HHHHHHHHHHHCCC-CeEEEEecCHHHHHHHHHHH
Confidence 44556666666654 689999999999999 6653
No 183
>KOG3724 consensus Negative regulator of COPII vesicle formation [Intracellular trafficking, secretion, and vesicular transport]
Probab=96.01 E-value=0.0047 Score=51.09 Aligned_cols=19 Identities=16% Similarity=0.216 Sum_probs=15.9
Q ss_pred CceEEEEEcchHHHH-HHhh
Q 044659 49 HKFDVIGISILTYLF-GLVS 67 (169)
Q Consensus 49 ~~~~l~G~S~Gg~ia-~~~~ 67 (169)
+.++++||||||.+| +++.
T Consensus 182 ~sVILVGHSMGGiVAra~~t 201 (973)
T KOG3724|consen 182 HSVILVGHSMGGIVARATLT 201 (973)
T ss_pred ceEEEEeccchhHHHHHHHh
Confidence 459999999999999 5554
No 184
>PLN02934 triacylglycerol lipase
Probab=95.99 E-value=0.011 Score=46.78 Aligned_cols=34 Identities=21% Similarity=0.101 Sum_probs=25.7
Q ss_pred hHHHHHHHHHHhcCCCCceEEEEEcchHHHH-HHhh
Q 044659 33 IEAFDIQELANQLNLGHKFDVIGISILTYLF-GLVS 67 (169)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~ia-~~~~ 67 (169)
.....+.+++++... .++++.|||+||.+| .++.
T Consensus 306 ~v~~~lk~ll~~~p~-~kIvVTGHSLGGALAtLaA~ 340 (515)
T PLN02934 306 AVRSKLKSLLKEHKN-AKFVVTGHSLGGALAILFPT 340 (515)
T ss_pred HHHHHHHHHHHHCCC-CeEEEeccccHHHHHHHHHH
Confidence 455556666666655 689999999999999 6653
No 185
>PF00756 Esterase: Putative esterase; InterPro: IPR000801 This family contains several seemingly unrelated proteins, including human esterase D; mycobacterial antigen 85, which is responsible for the high affinity of mycobacteria to fibronectin; Corynebacterium glutamicum major secreted protein PS1; and hypothetical proteins from Escherichia coli, yeast, mycobacteria and Haemophilus influenzae.; PDB: 3LS2_A 1VA5_B 1DQZ_B 3HRH_A 1DQY_A 2GZR_A 2GZS_A 3GFF_A 1R88_A 3E4D_D ....
Probab=95.92 E-value=0.012 Score=42.38 Aligned_cols=45 Identities=13% Similarity=0.056 Sum_probs=31.4
Q ss_pred HHHHHHHHh-cCCC-CceEEEEEcchHHHH-HHhhccccCCCc---ceEEEEeecc
Q 044659 36 FDIQELANQ-LNLG-HKFDVIGISILTYLF-GLVSNAHHTGIP---AGVALVVLVI 85 (169)
Q Consensus 36 ~~~~~~~~~-~~~~-~~~~l~G~S~Gg~ia-~~~~~~~~~~~p---~~~~~~~~~~ 85 (169)
+++...+++ +... ++..|+|+||||..| .++. ++| .+++.++|..
T Consensus 100 ~el~p~i~~~~~~~~~~~~i~G~S~GG~~Al~~~l-----~~Pd~F~~~~~~S~~~ 150 (251)
T PF00756_consen 100 EELIPYIEANYRTDPDRRAIAGHSMGGYGALYLAL-----RHPDLFGAVIAFSGAL 150 (251)
T ss_dssp THHHHHHHHHSSEEECCEEEEEETHHHHHHHHHHH-----HSTTTESEEEEESEES
T ss_pred ccchhHHHHhcccccceeEEeccCCCcHHHHHHHH-----hCccccccccccCccc
Confidence 344444443 3331 237999999999999 8888 788 7777778763
No 186
>PLN02324 triacylglycerol lipase
Probab=95.85 E-value=0.013 Score=45.37 Aligned_cols=34 Identities=9% Similarity=-0.029 Sum_probs=23.8
Q ss_pred HHHHHHHHHHhcCC-CCceEEEEEcchHHHH-HHhh
Q 044659 34 EAFDIQELANQLNL-GHKFDVIGISILTYLF-GLVS 67 (169)
Q Consensus 34 ~~~~~~~~~~~~~~-~~~~~l~G~S~Gg~ia-~~~~ 67 (169)
...++.+++++... +.+|.+.|||+||.+| .++.
T Consensus 199 Vl~eV~~L~~~Yp~e~~sItvTGHSLGGALAtLaA~ 234 (415)
T PLN02324 199 VQGELKRLLELYKNEEISITFTGHSLGAVMSVLSAA 234 (415)
T ss_pred HHHHHHHHHHHCCCCCceEEEecCcHHHHHHHHHHH
Confidence 34455666665543 1369999999999999 6664
No 187
>PLN02310 triacylglycerol lipase
Probab=95.80 E-value=0.014 Score=45.20 Aligned_cols=34 Identities=18% Similarity=0.018 Sum_probs=23.3
Q ss_pred HHHHHHHHHHhcC---CCCceEEEEEcchHHHH-HHhh
Q 044659 34 EAFDIQELANQLN---LGHKFDVIGISILTYLF-GLVS 67 (169)
Q Consensus 34 ~~~~~~~~~~~~~---~~~~~~l~G~S~Gg~ia-~~~~ 67 (169)
..+.+.++++... ...+|.+.|||+||.+| .++.
T Consensus 191 Vl~eV~~L~~~y~~~~e~~sI~vTGHSLGGALAtLaA~ 228 (405)
T PLN02310 191 VMQEVKRLVNFYRGKGEEVSLTVTGHSLGGALALLNAY 228 (405)
T ss_pred HHHHHHHHHHhhcccCCcceEEEEcccHHHHHHHHHHH
Confidence 3445555665542 11479999999999999 6664
No 188
>KOG3847 consensus Phospholipase A2 (platelet-activating factor acetylhydrolase in humans) [Lipid transport and metabolism]
Probab=95.67 E-value=0.031 Score=41.80 Aligned_cols=19 Identities=26% Similarity=0.029 Sum_probs=16.2
Q ss_pred CceEEEEEcchHHHH-HHhh
Q 044659 49 HKFDVIGISILTYLF-GLVS 67 (169)
Q Consensus 49 ~~~~l~G~S~Gg~ia-~~~~ 67 (169)
.++.++|||+||..+ ....
T Consensus 241 s~~aViGHSFGgAT~i~~ss 260 (399)
T KOG3847|consen 241 SQAAVIGHSFGGATSIASSS 260 (399)
T ss_pred hhhhheeccccchhhhhhhc
Confidence 468899999999999 6666
No 189
>PF06259 Abhydrolase_8: Alpha/beta hydrolase; InterPro: IPR010427 This is a family of uncharacterised proteins found in Actinobacteria. Computational analysis suggests that they may belong to the alpha-beta hydrolase family of enzymes, as they are predicted to form the core secondary structures and catalytic machinery common to these proteins []. Genomic context suggests that they may function as lipases, controlling the concentration of their putative phospholipid substrates.
Probab=95.61 E-value=0.068 Score=36.84 Aligned_cols=37 Identities=14% Similarity=0.116 Sum_probs=26.3
Q ss_pred hhhHHHHHHHHHHhcC----CCCceEEEEEcchHHHH-HHhh
Q 044659 31 VKIEAFDIQELANQLN----LGHKFDVIGISILTYLF-GLVS 67 (169)
Q Consensus 31 ~~~~~~~~~~~~~~~~----~~~~~~l~G~S~Gg~ia-~~~~ 67 (169)
-++-+.++..+++.+. .+.++.++|||+|+.++ .++.
T Consensus 87 A~~ga~~L~~f~~gl~a~~~~~~~~tv~GHSYGS~v~G~A~~ 128 (177)
T PF06259_consen 87 ARAGAPRLARFLDGLRATHGPDAHLTVVGHSYGSTVVGLAAQ 128 (177)
T ss_pred HHHHHHHHHHHHHHhhhhcCCCCCEEEEEecchhHHHHHHhh
Confidence 4445556666665553 22579999999999999 7776
No 190
>PLN02753 triacylglycerol lipase
Probab=95.52 E-value=0.021 Score=45.55 Aligned_cols=34 Identities=15% Similarity=0.003 Sum_probs=23.5
Q ss_pred HHHHHHHHHHhcCC----CCceEEEEEcchHHHH-HHhh
Q 044659 34 EAFDIQELANQLNL----GHKFDVIGISILTYLF-GLVS 67 (169)
Q Consensus 34 ~~~~~~~~~~~~~~----~~~~~l~G~S~Gg~ia-~~~~ 67 (169)
....+.+++++.+. +.+|.+.|||+||.+| .++.
T Consensus 293 Vl~eVkrLl~~Y~~e~~~~~sItVTGHSLGGALAtLaA~ 331 (531)
T PLN02753 293 ILTEVKRLVEEHGDDDDSDLSITVTGHSLGGALAILSAY 331 (531)
T ss_pred HHHHHHHHHHHcccccCCCceEEEEccCHHHHHHHHHHH
Confidence 34445556655532 2479999999999999 6654
No 191
>PLN03037 lipase class 3 family protein; Provisional
Probab=95.51 E-value=0.02 Score=45.55 Aligned_cols=34 Identities=15% Similarity=0.027 Sum_probs=23.6
Q ss_pred HHHHHHHHHHhcC---CCCceEEEEEcchHHHH-HHhh
Q 044659 34 EAFDIQELANQLN---LGHKFDVIGISILTYLF-GLVS 67 (169)
Q Consensus 34 ~~~~~~~~~~~~~---~~~~~~l~G~S~Gg~ia-~~~~ 67 (169)
..+++.++++.+. .+.++.+.|||+||.+| .++.
T Consensus 300 Vl~eV~rLv~~Yk~~ge~~SItVTGHSLGGALAtLaA~ 337 (525)
T PLN03037 300 VMEEVKRLVNFFKDRGEEVSLTITGHSLGGALALLNAY 337 (525)
T ss_pred HHHHHHHHHHhccccCCcceEEEeccCHHHHHHHHHHH
Confidence 3345566665553 11369999999999999 6664
No 192
>PLN02802 triacylglycerol lipase
Probab=95.47 E-value=0.022 Score=45.20 Aligned_cols=32 Identities=16% Similarity=0.095 Sum_probs=22.2
Q ss_pred HHHHHHHHhcCC-CCceEEEEEcchHHHH-HHhh
Q 044659 36 FDIQELANQLNL-GHKFDVIGISILTYLF-GLVS 67 (169)
Q Consensus 36 ~~~~~~~~~~~~-~~~~~l~G~S~Gg~ia-~~~~ 67 (169)
+++.++++...- ..+|++.|||+||.+| .++.
T Consensus 316 ~eV~~Ll~~Y~~e~~sI~VTGHSLGGALAtLaA~ 349 (509)
T PLN02802 316 GEVRRLMEKYKGEELSITVTGHSLGAALALLVAD 349 (509)
T ss_pred HHHHHHHHhCCCCcceEEEeccchHHHHHHHHHH
Confidence 344555555532 1368999999999999 6665
No 193
>PF07082 DUF1350: Protein of unknown function (DUF1350); InterPro: IPR010765 This family consists of several hypothetical proteins from both cyanobacteria and plants. Members of this family are typically around 250 residues in length. The function of this family is unknown but the species distribution indicates that the family may be involved in photosynthesis.
Probab=95.45 E-value=0.31 Score=35.36 Aligned_cols=71 Identities=15% Similarity=0.026 Sum_probs=38.5
Q ss_pred hhhhhhcCcEEEEeCCCCCCCCCCCCCCC-----hhhHHHHHHHHHHhcCCC---CceEEEEEcchHHHH-HHhhccccC
Q 044659 2 QDFMDELGVYVLTFDRTGYGESDPKPKRP-----VKIEAFDIQELANQLNLG---HKFDVIGISILTYLF-GLVSNAHHT 72 (169)
Q Consensus 2 ~~~l~~~g~~v~~~d~~G~G~s~~~~~~~-----~~~~~~~~~~~~~~~~~~---~~~~l~G~S~Gg~ia-~~~~~~~~~ 72 (169)
.+.|.+.||.|++.-+. .| -.... +...-.-++++.+..+.. -+++=+|||+|+-+- .+..
T Consensus 40 Le~La~~Gy~ViAtPy~-~t----fDH~~~A~~~~~~f~~~~~~L~~~~~~~~~~lP~~~vGHSlGcklhlLi~s----- 109 (250)
T PF07082_consen 40 LERLADRGYAVIATPYV-VT----FDHQAIAREVWERFERCLRALQKRGGLDPAYLPVYGVGHSLGCKLHLLIGS----- 109 (250)
T ss_pred HHHHHhCCcEEEEEecC-CC----CcHHHHHHHHHHHHHHHHHHHHHhcCCCcccCCeeeeecccchHHHHHHhh-----
Confidence 35677889999997664 11 01111 222222222222222221 257789999999999 6665
Q ss_pred CCc---ceEEEEe
Q 044659 73 GIP---AGVALVV 82 (169)
Q Consensus 73 ~~p---~~~~~~~ 82 (169)
.++ .+-++++
T Consensus 110 ~~~~~r~gniliS 122 (250)
T PF07082_consen 110 LFDVERAGNILIS 122 (250)
T ss_pred hccCcccceEEEe
Confidence 444 4555555
No 194
>COG4814 Uncharacterized protein with an alpha/beta hydrolase fold [General function prediction only]
Probab=95.37 E-value=0.033 Score=40.37 Aligned_cols=45 Identities=18% Similarity=0.277 Sum_probs=29.8
Q ss_pred HHHhcCCCCceEEEEEcchHHHH-HHhhc-cccCCCc--ceEEEEeecch
Q 044659 41 LANQLNLGHKFDVIGISILTYLF-GLVSN-AHHTGIP--AGVALVVLVIN 86 (169)
Q Consensus 41 ~~~~~~~~~~~~l~G~S~Gg~ia-~~~~~-~~~~~~p--~~~~~~~~~~~ 86 (169)
+-++.+. .++.++||||||.-. .++.. .....+| ...|.++...+
T Consensus 129 L~~~Y~i-~k~n~VGhSmGg~~~~~Y~~~yg~dks~P~lnK~V~l~gpfN 177 (288)
T COG4814 129 LQKHYNI-PKFNAVGHSMGGLGLTYYMIDYGDDKSLPPLNKLVSLAGPFN 177 (288)
T ss_pred HHHhcCC-ceeeeeeeccccHHHHHHHHHhcCCCCCcchhheEEeccccc
Confidence 3345567 799999999999988 55551 2333556 66776655443
No 195
>COG2819 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=95.35 E-value=0.043 Score=40.06 Aligned_cols=30 Identities=17% Similarity=0.174 Sum_probs=23.3
Q ss_pred CceEEEEEcchHHHH-HHhhccccCCCc---ceEEEEee
Q 044659 49 HKFDVIGISILTYLF-GLVSNAHHTGIP---AGVALVVL 83 (169)
Q Consensus 49 ~~~~l~G~S~Gg~ia-~~~~~~~~~~~p---~~~~~~~~ 83 (169)
++-.++|||+||.++ -++. ..| ....+++|
T Consensus 137 ~~~~i~GhSlGGLfvl~aLL-----~~p~~F~~y~~~SP 170 (264)
T COG2819 137 ERTAIIGHSLGGLFVLFALL-----TYPDCFGRYGLISP 170 (264)
T ss_pred ccceeeeecchhHHHHHHHh-----cCcchhceeeeecc
Confidence 578999999999999 7777 676 45555555
No 196
>KOG2029 consensus Uncharacterized conserved protein [Function unknown]
Probab=95.31 E-value=0.043 Score=44.30 Aligned_cols=38 Identities=18% Similarity=0.174 Sum_probs=27.6
Q ss_pred ChhhHHHHHHHHHHhcCCC--CceEEEEEcchHHHH-HHhh
Q 044659 30 PVKIEAFDIQELANQLNLG--HKFDVIGISILTYLF-GLVS 67 (169)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~--~~~~l~G~S~Gg~ia-~~~~ 67 (169)
++...+..+.+.+.+.+++ .+|+.+||||||.++ ..+.
T Consensus 505 sl~~Rs~~lleql~~~~VG~~RPivwI~HSmGGLl~K~lLl 545 (697)
T KOG2029|consen 505 SLAARSNELLEQLQAAGVGDDRPIVWIGHSMGGLLAKKLLL 545 (697)
T ss_pred HHHHHHHHHHHHHHHhccCCCCceEEEecccchHHHHHHHH
Confidence 3666666666666666553 579999999999999 5554
No 197
>PLN02719 triacylglycerol lipase
Probab=95.23 E-value=0.028 Score=44.71 Aligned_cols=33 Identities=15% Similarity=0.038 Sum_probs=22.2
Q ss_pred HHHHHHHHHhcCC----CCceEEEEEcchHHHH-HHhh
Q 044659 35 AFDIQELANQLNL----GHKFDVIGISILTYLF-GLVS 67 (169)
Q Consensus 35 ~~~~~~~~~~~~~----~~~~~l~G~S~Gg~ia-~~~~ 67 (169)
...+.++++.... ..+|.+.|||+||.+| .++.
T Consensus 280 l~eV~rL~~~Ypd~~ge~~sItVTGHSLGGALAtLaA~ 317 (518)
T PLN02719 280 LTEVKRLVERYGDEEGEELSITVTGHSLGGALAVLSAY 317 (518)
T ss_pred HHHHHHHHHHCCcccCCcceEEEecCcHHHHHHHHHHH
Confidence 3344555555431 1379999999999999 6664
No 198
>cd00312 Esterase_lipase Esterases and lipases (includes fungal lipases, cholinesterases, etc.) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate.
Probab=95.13 E-value=0.064 Score=42.83 Aligned_cols=58 Identities=12% Similarity=0.099 Sum_probs=36.6
Q ss_pred cEEEEeCCC----CCCCCCCCC-CC--ChhhHHHHHHHHHH---hcCC-CCceEEEEEcchHHHH-HHhh
Q 044659 10 VYVLTFDRT----GYGESDPKP-KR--PVKIEAFDIQELAN---QLNL-GHKFDVIGISILTYLF-GLVS 67 (169)
Q Consensus 10 ~~v~~~d~~----G~G~s~~~~-~~--~~~~~~~~~~~~~~---~~~~-~~~~~l~G~S~Gg~ia-~~~~ 67 (169)
+.|+++++| |+..+.... .. .+.|...-++.+-+ ..+. .++|.|+|+|.||..+ ..+.
T Consensus 126 ~~vv~~~yRlg~~g~~~~~~~~~~~n~g~~D~~~al~wv~~~i~~fggd~~~v~~~G~SaG~~~~~~~~~ 195 (493)
T cd00312 126 VIVVSINYRLGVLGFLSTGDIELPGNYGLKDQRLALKWVQDNIAAFGGDPDSVTIFGESAGGASVSLLLL 195 (493)
T ss_pred EEEEEecccccccccccCCCCCCCcchhHHHHHHHHHHHHHHHHHhCCCcceEEEEeecHHHHHhhhHhh
Confidence 999999999 333332211 11 25555555444443 3442 2789999999999999 6665
No 199
>PLN02761 lipase class 3 family protein
Probab=95.10 E-value=0.033 Score=44.43 Aligned_cols=34 Identities=15% Similarity=0.034 Sum_probs=23.0
Q ss_pred HHHHHHHHHHhcC-----CCCceEEEEEcchHHHH-HHhh
Q 044659 34 EAFDIQELANQLN-----LGHKFDVIGISILTYLF-GLVS 67 (169)
Q Consensus 34 ~~~~~~~~~~~~~-----~~~~~~l~G~S~Gg~ia-~~~~ 67 (169)
....+..+++... .+-+|.+.|||+||.+| .++.
T Consensus 274 Vl~eV~rL~~~Y~~~~k~e~~sItVTGHSLGGALAtLaA~ 313 (527)
T PLN02761 274 VLAEVKRLVEYYGTEEEGHEISITVTGHSLGASLALVSAY 313 (527)
T ss_pred HHHHHHHHHHhcccccCCCCceEEEeccchHHHHHHHHHH
Confidence 3445555665552 11369999999999999 6664
No 200
>PF11187 DUF2974: Protein of unknown function (DUF2974); InterPro: IPR024499 This family of proteins has no known function.
Probab=95.08 E-value=0.049 Score=39.05 Aligned_cols=19 Identities=26% Similarity=-0.031 Sum_probs=16.6
Q ss_pred CceEEEEEcchHHHH-HHhh
Q 044659 49 HKFDVIGISILTYLF-GLVS 67 (169)
Q Consensus 49 ~~~~l~G~S~Gg~ia-~~~~ 67 (169)
.++.+.|||.||.+| .++.
T Consensus 84 ~~i~v~GHSkGGnLA~yaa~ 103 (224)
T PF11187_consen 84 GKIYVTGHSKGGNLAQYAAA 103 (224)
T ss_pred CCEEEEEechhhHHHHHHHH
Confidence 469999999999999 6666
No 201
>KOG2182 consensus Hydrolytic enzymes of the alpha/beta hydrolase fold [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=95.01 E-value=0.099 Score=41.41 Aligned_cols=68 Identities=21% Similarity=0.269 Sum_probs=54.0
Q ss_pred hhhhhcCcEEEEeCCCCCCCCCCCCCC--------ChhhHHHHHHHHHHhcCC----C--CceEEEEEcchHHHH-HHhh
Q 044659 3 DFMDELGVYVLTFDRTGYGESDPKPKR--------PVKIEAFDIQELANQLNL----G--HKFDVIGISILTYLF-GLVS 67 (169)
Q Consensus 3 ~~l~~~g~~v~~~d~~G~G~s~~~~~~--------~~~~~~~~~~~~~~~~~~----~--~~~~l~G~S~Gg~ia-~~~~ 67 (169)
.++++.|-.|+..++|=||.|.+.... +..+...|+.+++++++. . .+.+.+|-|+-|.++ ++-.
T Consensus 112 ~~AkkfgA~v~~lEHRFYG~S~P~~~~st~nlk~LSs~QALaDla~fI~~~n~k~n~~~~~~WitFGgSYsGsLsAW~R~ 191 (514)
T KOG2182|consen 112 QWAKKFGATVFQLEHRFYGQSSPIGDLSTSNLKYLSSLQALADLAEFIKAMNAKFNFSDDSKWITFGGSYSGSLSAWFRE 191 (514)
T ss_pred HHHHHhCCeeEEeeeeccccCCCCCCCcccchhhhhHHHHHHHHHHHHHHHHhhcCCCCCCCeEEECCCchhHHHHHHHH
Confidence 456788999999999999988664332 266777788888887752 1 378999999999999 8888
Q ss_pred ccccCCCc
Q 044659 68 NAHHTGIP 75 (169)
Q Consensus 68 ~~~~~~~p 75 (169)
.+|
T Consensus 192 -----~yP 194 (514)
T KOG2182|consen 192 -----KYP 194 (514)
T ss_pred -----hCc
Confidence 888
No 202
>COG2830 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=94.99 E-value=0.049 Score=36.77 Aligned_cols=35 Identities=26% Similarity=0.228 Sum_probs=24.2
Q ss_pred EEeCCCCcchHHHHHHHhCCCcEEEEecCCCceeee
Q 044659 132 CQGHKDKLVPFHRYRAKKLPRIRYHEGSAGGHLMIH 167 (169)
Q Consensus 132 ~~g~~D~~v~~~~~~~~~~~~~~~~~~~~~gH~~~~ 167 (169)
+.|.+|.++|++..-+-+...+.++++.+ +|+.+.
T Consensus 170 ~v~skDkIFpp~nq~ayw~~rc~v~ei~g-~H~~F~ 204 (214)
T COG2830 170 YVGSKDKIFPPANQHAYWNARCAVIEING-EHYLFS 204 (214)
T ss_pred hccCCCcccCCcchhhhhccceeEEEecC-cceEEe
Confidence 57899999999322333444577788866 898764
No 203
>KOG4569 consensus Predicted lipase [Lipid transport and metabolism]
Probab=94.71 E-value=0.047 Score=41.58 Aligned_cols=35 Identities=14% Similarity=-0.107 Sum_probs=27.5
Q ss_pred hhHHHHHHHHHHhcCCCCceEEEEEcchHHHH-HHhh
Q 044659 32 KIEAFDIQELANQLNLGHKFDVIGISILTYLF-GLVS 67 (169)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~ia-~~~~ 67 (169)
....+++..+++...- -++.+-|||+||.+| .++.
T Consensus 155 ~~~~~~~~~L~~~~~~-~~i~vTGHSLGgAlA~laa~ 190 (336)
T KOG4569|consen 155 SGLDAELRRLIELYPN-YSIWVTGHSLGGALASLAAL 190 (336)
T ss_pred HHHHHHHHHHHHhcCC-cEEEEecCChHHHHHHHHHH
Confidence 4556677777777764 689999999999999 6665
No 204
>COG4287 PqaA PhoPQ-activated pathogenicity-related protein [General function prediction only]
Probab=94.63 E-value=0.092 Score=40.22 Aligned_cols=120 Identities=16% Similarity=0.101 Sum_probs=71.0
Q ss_pred hhhHHHHHHHHHHhcCCCCceEEEEEcchHHHH-HHhhccccCCCc--ceEE-EEeecchhhhhhhcccchhHHHHHHHH
Q 044659 31 VKIEAFDIQELANQLNLGHKFDVIGISILTYLF-GLVSNAHHTGIP--AGVA-LVVLVINYCITCRLQGAHESLHRDIMV 106 (169)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~ia-~~~~~~~~~~~p--~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 106 (169)
.....+..+..+.+..+ +.+.+-|.|--|+.+ ..+. .-| ..++ ++....+.. ..+.+.+..
T Consensus 217 ~srAMdlAq~eL~q~~I-k~F~VTGaSKRgWttwLTAI-----aDprv~aIvp~v~D~Lni~---------a~L~hiyrs 281 (507)
T COG4287 217 VSRAMDLAQDELEQVEI-KGFMVTGASKRGWTTWLTAI-----ADPRVFAIVPFVYDNLNIE---------AQLLHIYRS 281 (507)
T ss_pred HHHHHHHHHhhhhheee-eeEEEeccccchHHHHHHHh-----cCcchhhhhhhHHhhcccH---------HHHHHHHHh
Confidence 34444455667777878 789999999999999 6665 555 2211 112222210 001111111
Q ss_pred HhcCCCC--------------------Cchhhhcc--------CCCCCCceEEEEeCCCCcchH--HHHHHHhCCCcE-E
Q 044659 107 HLGTWEF--------------------DPMEMENQ--------FPNNEESVYLCQGHKDKLVPF--HRYRAKKLPRIR-Y 155 (169)
Q Consensus 107 ~~~~~~~--------------------~~~~~~~~--------~~~~~~P~l~~~g~~D~~v~~--~~~~~~~~~~~~-~ 155 (169)
.-++|.. .+.+|..| ...+..|-.++.+..|.++++ +..+++.+|+.+ +
T Consensus 282 YGgnwpi~l~pyyaegi~erl~tp~fkqL~~IiDPlay~~try~~RLalpKyivnaSgDdff~pDsa~lYyd~LPG~kaL 361 (507)
T COG4287 282 YGGNWPIKLAPYYAEGIDERLETPLFKQLLEIIDPLAYRNTRYQLRLALPKYIVNASGDDFFVPDSANLYYDDLPGEKAL 361 (507)
T ss_pred hCCCCCcccchhHhhhHHHhhcCHHHHHHHHhhcHHHHhhhhhhhhccccceeecccCCcccCCCccceeeccCCCceee
Confidence 1112210 11112222 234677899999999998888 888999999854 6
Q ss_pred EEecCCCcee
Q 044659 156 HEGSAGGHLM 165 (169)
Q Consensus 156 ~~~~~~gH~~ 165 (169)
..+|+.-|..
T Consensus 362 rmvPN~~H~~ 371 (507)
T COG4287 362 RMVPNDPHNL 371 (507)
T ss_pred eeCCCCcchh
Confidence 7889999975
No 205
>PF12048 DUF3530: Protein of unknown function (DUF3530); InterPro: IPR022529 This family of proteins is functionally uncharacterised. This protein is found in bacteria. Proteins in this family are typically between 272 to 336 amino acids in length. These proteins are distantly related to alpa/beta hydrolases so they may act as enzymes.
Probab=94.52 E-value=0.36 Score=36.38 Aligned_cols=33 Identities=12% Similarity=0.076 Sum_probs=26.0
Q ss_pred CceEEEEEcchHHHH-HHhhccccCCCc----ceEEEEeecch
Q 044659 49 HKFDVIGISILTYLF-GLVSNAHHTGIP----AGVALVVLVIN 86 (169)
Q Consensus 49 ~~~~l~G~S~Gg~ia-~~~~~~~~~~~p----~~~~~~~~~~~ 86 (169)
++++|+||..|+..+ .++. ..+ .++|++++..+
T Consensus 193 ~~ivlIg~G~gA~~~~~~la-----~~~~~~~daLV~I~a~~p 230 (310)
T PF12048_consen 193 KNIVLIGHGTGAGWAARYLA-----EKPPPMPDALVLINAYWP 230 (310)
T ss_pred ceEEEEEeChhHHHHHHHHh-----cCCCcccCeEEEEeCCCC
Confidence 569999999999999 6666 333 68888887554
No 206
>COG1073 Hydrolases of the alpha/beta superfamily [General function prediction only]
Probab=94.45 E-value=0.059 Score=39.27 Aligned_cols=41 Identities=22% Similarity=0.353 Sum_probs=33.3
Q ss_pred CceEEEEeCCCCcchH--HHHHHHhCCC--cEEEEecCCCceeee
Q 044659 127 ESVYLCQGHKDKLVPF--HRYRAKKLPR--IRYHEGSAGGHLMIH 167 (169)
Q Consensus 127 ~P~l~~~g~~D~~v~~--~~~~~~~~~~--~~~~~~~~~gH~~~~ 167 (169)
.|+++++|++|..+|. ...+++.... .+...+++++|....
T Consensus 233 ~P~l~~~G~~D~~vp~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~ 277 (299)
T COG1073 233 RPVLLVHGERDEVVPLRDAEDLYEAARERPKKLLFVPGGGHIDLY 277 (299)
T ss_pred cceEEEecCCCcccchhhhHHHHhhhccCCceEEEecCCcccccc
Confidence 7999999999999998 6666665554 678888998998653
No 207
>PF01083 Cutinase: Cutinase; InterPro: IPR000675 Aerial plant organs are protected by a cuticle composed of an insoluble polymeric structural compound, cutin, which is a polyester composed of hydroxy and hydroxyepoxy fatty acids []. Plant pathogenic fungi produce extracellular degradative enzymes [] that play an important role in pathogenesis. They include cutinase, which hydrolyses cutin, facilitating fungus penetration through the cuticle. Inhibition of the enzyme can prevent fungal infection through intact cuticles. Cutin monomers released from the cuticle by small amounts of cutinase on fungal spore surfaces can greatly increase the amount of cutinase secreted by the spore, the mechanism for which process is as yet unknown [, ]. Cutinase is a serine esterase containing the classical Ser, His, Asp triad of serine hydrolases []. The protein belongs to the alpha-beta class, with a central beta-sheet of 5 parallel strands covered by 5 helices on either side of the sheet. The active site cleft is partly covered by 2 thin bridges formed by amino acid side chains, by contrast with the hydrophobic lid possessed by other lipases []. The protein also contains 2 disulphide bridges, which are essential for activity, their cleavage resulting in complete loss of enzymatic activity []. Two cutinase-like proteins (MtCY39.35 and MtCY339.08c) have been found in the genome of the bacteria Mycobacterium tuberculosis.; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 1XZK_A 1XZA_A 1CUD_C 1XZI_A 1XZH_A 1CUF_A 1FFD_A 2CUT_A 1FFA_A 1CUA_A ....
Probab=94.29 E-value=0.17 Score=34.94 Aligned_cols=36 Identities=22% Similarity=0.065 Sum_probs=24.0
Q ss_pred hhhHHHHHHHHHHhcCCCCceEEEEEcchHHHH-HHhh
Q 044659 31 VKIEAFDIQELANQLNLGHKFDVIGISILTYLF-GLVS 67 (169)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~ia-~~~~ 67 (169)
..+..+.+.+...+=.- .+++|+|+|.|+.++ .++.
T Consensus 64 ~~~~~~~i~~~~~~CP~-~kivl~GYSQGA~V~~~~~~ 100 (179)
T PF01083_consen 64 VANLVRLIEEYAARCPN-TKIVLAGYSQGAMVVGDALS 100 (179)
T ss_dssp HHHHHHHHHHHHHHSTT-SEEEEEEETHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCC-CCEEEEecccccHHHHHHHH
Confidence 33333344444344333 799999999999999 7776
No 208
>PF08237 PE-PPE: PE-PPE domain; InterPro: IPR013228 The human pathogen Mycobacterium tuberculosis harbours a large number of genes that encode proteins whose N-termini contain the characteristic motifs Pro-Glu (PE) or Pro-Pro-Glu (PPE). A subgroup of the PE proteins contains polymorphic GC-rich sequences (PGRS), while a subgroup of the PPE proteins contains major polymorphic tandem repeats (MPTR). The function of most of these proteins remains unknown []. However, the PE_PGRS proteins from Mycobacterium marinum are secreted by components of the ESX-5 system that belongs to the recently defined type VII secretion systems []. It has also been reported that the PE_PGRS family of proteins contains multiple calcium-binding and glycine-rich sequence motifs GGXGXD/NXUX. This sequence repeat constitutes a calcium-binding parallel beta-roll or parallel beta-helix structure and is found in RTX toxins secreted by many Gram-negative bacteria []. This domain is found C-terminal to the PE (IPR000084 from INTERPRO) and PPE (IPR000030 from INTERPRO) domains. The secondary structure of this domain is predicted to be a mixture of alpha helices and beta strands [].
Probab=94.18 E-value=0.28 Score=35.21 Aligned_cols=60 Identities=17% Similarity=0.241 Sum_probs=36.9
Q ss_pred CcEEEEeCCCC-C----CCCCCCCCCChhhHHHHHHHHHHh-cCCCCceEEEEEcchHHHH-HHhhc
Q 044659 9 GVYVLTFDRTG-Y----GESDPKPKRPVKIEAFDIQELANQ-LNLGHKFDVIGISILTYLF-GLVSN 68 (169)
Q Consensus 9 g~~v~~~d~~G-~----G~s~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~G~S~Gg~ia-~~~~~ 68 (169)
|+.+...++|. + |.....-..++.+-++.+.+.++. ...+++++++|+|+|+.++ .++.+
T Consensus 2 ~~~~~~V~YPa~f~P~~g~~~~t~~~Sv~~G~~~L~~ai~~~~~~~~~vvV~GySQGA~Va~~~~~~ 68 (225)
T PF08237_consen 2 GYNVVAVDYPASFWPVTGIGSPTYDESVAEGVANLDAAIRAAIAAGGPVVVFGYSQGAVVASNVLRR 68 (225)
T ss_pred CcceEEecCCchhcCcCCCCCCccchHHHHHHHHHHHHHHhhccCCCCEEEEEECHHHHHHHHHHHH
Confidence 56667777776 1 111111223466666666665555 3234789999999999999 66653
No 209
>PLN02847 triacylglycerol lipase
Probab=94.01 E-value=0.094 Score=42.61 Aligned_cols=19 Identities=21% Similarity=0.086 Sum_probs=16.2
Q ss_pred CceEEEEEcchHHHH-HHhh
Q 044659 49 HKFDVIGISILTYLF-GLVS 67 (169)
Q Consensus 49 ~~~~l~G~S~Gg~ia-~~~~ 67 (169)
-+++++|||+||.+| .++.
T Consensus 251 YkLVITGHSLGGGVAALLAi 270 (633)
T PLN02847 251 FKIKIVGHSLGGGTAALLTY 270 (633)
T ss_pred CeEEEeccChHHHHHHHHHH
Confidence 479999999999999 5554
No 210
>PF11144 DUF2920: Protein of unknown function (DUF2920); InterPro: IPR022605 This bacterial family of proteins has no known function.
Probab=94.00 E-value=0.89 Score=35.42 Aligned_cols=22 Identities=27% Similarity=-0.017 Sum_probs=20.1
Q ss_pred CceEEEEEcchHHHH-HHhhccccCCCc
Q 044659 49 HKFDVIGISILTYLF-GLVSNAHHTGIP 75 (169)
Q Consensus 49 ~~~~l~G~S~Gg~ia-~~~~~~~~~~~p 75 (169)
-+++.+|+|.||++| +++. -.|
T Consensus 184 lp~I~~G~s~G~yla~l~~k-----~aP 206 (403)
T PF11144_consen 184 LPKIYIGSSHGGYLAHLCAK-----IAP 206 (403)
T ss_pred CcEEEEecCcHHHHHHHHHh-----hCc
Confidence 389999999999999 8888 888
No 211
>KOG3967 consensus Uncharacterized conserved protein [Function unknown]
Probab=93.79 E-value=0.52 Score=33.56 Aligned_cols=74 Identities=18% Similarity=0.170 Sum_probs=43.8
Q ss_pred hhhhcCcEEEEeCCCC---CCCCCCCCCCC----hhhHHHHHHHHHHhcCCCCceEEEEEcchHHHH-HHhhccccCCCc
Q 044659 4 FMDELGVYVLTFDRTG---YGESDPKPKRP----VKIEAFDIQELANQLNLGHKFDVIGISILTYLF-GLVSNAHHTGIP 75 (169)
Q Consensus 4 ~l~~~g~~v~~~d~~G---~G~s~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~ia-~~~~~~~~~~~p 75 (169)
.+.+.||.|+....-- +-++..++..- ++....-...++...+. +.+.++.||.||... .++. ++|
T Consensus 139 rAv~~Gygviv~N~N~~~kfye~k~np~kyirt~veh~~yvw~~~v~pa~~-~sv~vvahsyGG~~t~~l~~-----~f~ 212 (297)
T KOG3967|consen 139 RAVAEGYGVIVLNPNRERKFYEKKRNPQKYIRTPVEHAKYVWKNIVLPAKA-ESVFVVAHSYGGSLTLDLVE-----RFP 212 (297)
T ss_pred HHHHcCCcEEEeCCchhhhhhhcccCcchhccchHHHHHHHHHHHhcccCc-ceEEEEEeccCChhHHHHHH-----hcC
Confidence 4567789988876431 22222222211 22222223344444555 789999999999999 8888 777
Q ss_pred --ceEEEEee
Q 044659 76 --AGVALVVL 83 (169)
Q Consensus 76 --~~~~~~~~ 83 (169)
.++..++-
T Consensus 213 ~d~~v~aial 222 (297)
T KOG3967|consen 213 DDESVFAIAL 222 (297)
T ss_pred CccceEEEEe
Confidence 44444443
No 212
>COG0627 Predicted esterase [General function prediction only]
Probab=93.56 E-value=0.31 Score=36.85 Aligned_cols=33 Identities=15% Similarity=0.054 Sum_probs=24.7
Q ss_pred ceEEEEEcchHHHH-HHhhccccCCCc---ceEEEEeecchh
Q 044659 50 KFDVIGISILTYLF-GLVSNAHHTGIP---AGVALVVLVINY 87 (169)
Q Consensus 50 ~~~l~G~S~Gg~ia-~~~~~~~~~~~p---~~~~~~~~~~~~ 87 (169)
+-.|+||||||.=| .++. ++| ..+.-++++.+.
T Consensus 153 ~~aI~G~SMGG~GAl~lA~-----~~pd~f~~~sS~Sg~~~~ 189 (316)
T COG0627 153 GRAIAGHSMGGYGALKLAL-----KHPDRFKSASSFSGILSP 189 (316)
T ss_pred CceeEEEeccchhhhhhhh-----hCcchhceeccccccccc
Confidence 78999999999999 7777 665 555555555543
No 213
>PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase
Probab=92.95 E-value=0.48 Score=35.83 Aligned_cols=58 Identities=21% Similarity=0.202 Sum_probs=36.3
Q ss_pred cEEEEeCCC-CCCCCCCCCCC---ChhhHHHHHHHHHHh----cC--CCCceEEEEEcchHHHH-HHhh
Q 044659 10 VYVLTFDRT-GYGESDPKPKR---PVKIEAFDIQELANQ----LN--LGHKFDVIGISILTYLF-GLVS 67 (169)
Q Consensus 10 ~~v~~~d~~-G~G~s~~~~~~---~~~~~~~~~~~~~~~----~~--~~~~~~l~G~S~Gg~ia-~~~~ 67 (169)
.+++-+|.| |-|.|-..... +-+..++|+-.++.. .. ...+++|.|-|.||..+ .++.
T Consensus 2 aNvLfiDqPvGvGfSy~~~~~~~~~d~~~a~d~~~fL~~Ff~~~p~~~~~~fyI~GESYaG~YiP~la~ 70 (319)
T PLN02213 2 ANIIFLDQPVGSGFSYSKTPIDKTGDISEVKRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQ 70 (319)
T ss_pred ccEEEecCCCCCCCCCCCCCCCccccHHHHHHHHHHHHHHHHhCcccccCCeEEEeeccccchHHHHHH
Confidence 368889988 88888543211 122333555444443 22 12679999999999988 5555
No 214
>PLN02633 palmitoyl protein thioesterase family protein
Probab=92.82 E-value=0.29 Score=36.68 Aligned_cols=37 Identities=22% Similarity=0.307 Sum_probs=25.5
Q ss_pred hhhHHHHHHHHHHhcC-CCCceEEEEEcchHHHH-HHhh
Q 044659 31 VKIEAFDIQELANQLN-LGHKFDVIGISILTYLF-GLVS 67 (169)
Q Consensus 31 ~~~~~~~~~~~~~~~~-~~~~~~l~G~S~Gg~ia-~~~~ 67 (169)
..+.++.+.+.+.+.. +.+-++++|+|.||.++ +++.
T Consensus 75 ~~~Qve~vce~l~~~~~l~~G~naIGfSQGGlflRa~ie 113 (314)
T PLN02633 75 LTQQAEIACEKVKQMKELSQGYNIVGRSQGNLVARGLIE 113 (314)
T ss_pred HHHHHHHHHHHHhhchhhhCcEEEEEEccchHHHHHHHH
Confidence 5555555554444422 22459999999999999 8888
No 215
>KOG4540 consensus Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking, secretion, and vesicular transport; Lipid transport and metabolism]
Probab=92.76 E-value=0.29 Score=36.37 Aligned_cols=31 Identities=16% Similarity=-0.065 Sum_probs=22.5
Q ss_pred CCceEEEEEcchHHHH-HHhhccccCCCc-ceEEEEee
Q 044659 48 GHKFDVIGISILTYLF-GLVSNAHHTGIP-AGVALVVL 83 (169)
Q Consensus 48 ~~~~~l~G~S~Gg~ia-~~~~~~~~~~~p-~~~~~~~~ 83 (169)
+.++.+-|||+||.+| .+.. ++. -.+.+-+|
T Consensus 275 da~iwlTGHSLGGa~AsLlG~-----~fglP~VaFesP 307 (425)
T KOG4540|consen 275 DARIWLTGHSLGGAIASLLGI-----RFGLPVVAFESP 307 (425)
T ss_pred CceEEEeccccchHHHHHhcc-----ccCCceEEecCc
Confidence 3689999999999999 7666 554 34444444
No 216
>COG5153 CVT17 Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking and secretion / Lipid metabolism]
Probab=92.76 E-value=0.29 Score=36.37 Aligned_cols=31 Identities=16% Similarity=-0.065 Sum_probs=22.5
Q ss_pred CCceEEEEEcchHHHH-HHhhccccCCCc-ceEEEEee
Q 044659 48 GHKFDVIGISILTYLF-GLVSNAHHTGIP-AGVALVVL 83 (169)
Q Consensus 48 ~~~~~l~G~S~Gg~ia-~~~~~~~~~~~p-~~~~~~~~ 83 (169)
+.++.+-|||+||.+| .+.. ++. -.+.+-+|
T Consensus 275 da~iwlTGHSLGGa~AsLlG~-----~fglP~VaFesP 307 (425)
T COG5153 275 DARIWLTGHSLGGAIASLLGI-----RFGLPVVAFESP 307 (425)
T ss_pred CceEEEeccccchHHHHHhcc-----ccCCceEEecCc
Confidence 3689999999999999 7666 554 34444444
No 217
>PF05277 DUF726: Protein of unknown function (DUF726); InterPro: IPR007941 This family consists of several uncharacterised eukaryotic proteins.
Probab=92.68 E-value=0.37 Score=36.82 Aligned_cols=37 Identities=11% Similarity=0.102 Sum_probs=23.8
Q ss_pred CceEEEEEcchHHHH-HHhhccccC-CCc--ceEEEEeecc
Q 044659 49 HKFDVIGISILTYLF-GLVSNAHHT-GIP--AGVALVVLVI 85 (169)
Q Consensus 49 ~~~~l~G~S~Gg~ia-~~~~~~~~~-~~p--~~~~~~~~~~ 85 (169)
.++.|+|||+|+.+. .++..+.+. .+. ..++++..+.
T Consensus 220 RpVtLvG~SLGarvI~~cL~~L~~~~~~~lVe~VvL~Gapv 260 (345)
T PF05277_consen 220 RPVTLVGHSLGARVIYYCLLELAERKAFGLVENVVLMGAPV 260 (345)
T ss_pred CceEEEeecccHHHHHHHHHHHHhccccCeEeeEEEecCCC
Confidence 579999999999999 666532222 122 5566665433
No 218
>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]
Probab=92.23 E-value=2.3 Score=38.13 Aligned_cols=66 Identities=17% Similarity=0.174 Sum_probs=44.7
Q ss_pred CCCCCCC--CCCCCCChhhHHHHHHHHHHhcCCCCceEEEEEcchHHHH-HHhhccccCCCcceEEEEe
Q 044659 17 RTGYGES--DPKPKRPVKIEAFDIQELANQLNLGHKFDVIGISILTYLF-GLVSNAHHTGIPAGVALVV 82 (169)
Q Consensus 17 ~~G~G~s--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~ia-~~~~~~~~~~~p~~~~~~~ 82 (169)
.|-||.- ...+..+++..+.-....+++++...++-++|+|+|+.++ .++.-++.+..|..++++-
T Consensus 2148 ~PaYglQ~T~~vP~dSies~A~~yirqirkvQP~GPYrl~GYSyG~~l~f~ma~~Lqe~~~~~~lillD 2216 (2376)
T KOG1202|consen 2148 IPAYGLQCTEAVPLDSIESLAAYYIRQIRKVQPEGPYRLAGYSYGACLAFEMASQLQEQQSPAPLILLD 2216 (2376)
T ss_pred CcchhhhccccCCcchHHHHHHHHHHHHHhcCCCCCeeeeccchhHHHHHHHHHHHHhhcCCCcEEEec
Confidence 3455532 2234445888887766667777654689999999999999 6666455556665666664
No 219
>PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A ....
Probab=91.97 E-value=0.55 Score=36.47 Aligned_cols=78 Identities=22% Similarity=0.135 Sum_probs=48.3
Q ss_pred cEEEEeCCC-CCCCCCCCCCC----ChhhHHHHHHHHHHhc----C--CCCceEEEEEcchHHHH-HHhhccccC-----
Q 044659 10 VYVLTFDRT-GYGESDPKPKR----PVKIEAFDIQELANQL----N--LGHKFDVIGISILTYLF-GLVSNAHHT----- 72 (169)
Q Consensus 10 ~~v~~~d~~-G~G~s~~~~~~----~~~~~~~~~~~~~~~~----~--~~~~~~l~G~S~Gg~ia-~~~~~~~~~----- 72 (169)
.+++.+|.| |-|.|...... +.++.++++.++++.+ . ...+++|.|-|+||..+ .++......
T Consensus 86 an~l~iD~PvGtGfS~~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~~a~~i~~~~~~~~ 165 (415)
T PF00450_consen 86 ANLLFIDQPVGTGFSYGNDPSDYVWNDDQAAEDLYEFLQQFFQKFPEYRSNPLYIAGESYGGHYVPALASYILQQNKKGD 165 (415)
T ss_dssp SEEEEE--STTSTT-EESSGGGGS-SHHHHHHHHHHHHHHHHHHSGGGTTSEEEEEEETTHHHHHHHHHHHHHHHTCC--
T ss_pred cceEEEeecCceEEeeccccccccchhhHHHHHHHHHHHHhhhhhhhccCCCEEEEccccccccchhhHHhhhhcccccc
Confidence 789999955 99998654332 4677777777766543 1 22489999999999987 554421111
Q ss_pred --CCc-ceEEEEeecchh
Q 044659 73 --GIP-AGVALVVLVINY 87 (169)
Q Consensus 73 --~~p-~~~~~~~~~~~~ 87 (169)
... +++++..+....
T Consensus 166 ~~~inLkGi~IGng~~dp 183 (415)
T PF00450_consen 166 QPKINLKGIAIGNGWIDP 183 (415)
T ss_dssp STTSEEEEEEEESE-SBH
T ss_pred ccccccccceecCccccc
Confidence 122 788877776643
No 220
>PF02089 Palm_thioest: Palmitoyl protein thioesterase; InterPro: IPR002472 Neuronal ceroid lipofuscinoses (NCL) represent a group of encephalopathies that occur in 1 in 12,500 children. Mutations in the palmitoyl protein thioesterase gene causing infantile neuronal ceroid lipofuscinosis []. The most common mutation results in intracellular accumulation of the polypeptide and undetectable enzyme activity in the brain. Direct sequencing of cDNAs derived from brain RNA of INCL patients has shown a mis-sense transversion of A to T at nucleotide position 364, which results in substitution of Trp for Arg at position 122 in the protein - Arg 122 is immediately adjacent to a lipase consensus sequence that contains the putative active site Ser of PPT. The occurrence of this and two other independent mutations in the PPT gene strongly suggests that defects in this gene cause INCL.; GO: 0008474 palmitoyl-(protein) hydrolase activity, 0006464 protein modification process; PDB: 3GRO_B 1PJA_A 1EXW_A 1EH5_A 1EI9_A.
Probab=91.76 E-value=0.52 Score=34.89 Aligned_cols=37 Identities=22% Similarity=0.223 Sum_probs=24.2
Q ss_pred hhhHHHHHHHHHHhcC-CCCceEEEEEcchHHHH-HHhh
Q 044659 31 VKIEAFDIQELANQLN-LGHKFDVIGISILTYLF-GLVS 67 (169)
Q Consensus 31 ~~~~~~~~~~~~~~~~-~~~~~~l~G~S~Gg~ia-~~~~ 67 (169)
+.+..+.+.+.++... +..-++++|+|.||.+. +++.
T Consensus 61 v~~Qv~~vc~~l~~~p~L~~G~~~IGfSQGgl~lRa~vq 99 (279)
T PF02089_consen 61 VNDQVEQVCEQLANDPELANGFNAIGFSQGGLFLRAYVQ 99 (279)
T ss_dssp HHHHHHHHHHHHHH-GGGTT-EEEEEETCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhChhhhcceeeeeeccccHHHHHHHH
Confidence 3444444544444422 22469999999999999 9888
No 221
>PLN02606 palmitoyl-protein thioesterase
Probab=91.73 E-value=0.35 Score=36.20 Aligned_cols=37 Identities=19% Similarity=0.267 Sum_probs=25.1
Q ss_pred hhhHHHHHHHHHHhcC-CCCceEEEEEcchHHHH-HHhh
Q 044659 31 VKIEAFDIQELANQLN-LGHKFDVIGISILTYLF-GLVS 67 (169)
Q Consensus 31 ~~~~~~~~~~~~~~~~-~~~~~~l~G~S~Gg~ia-~~~~ 67 (169)
..+.++.+.+.+.+.. +.+-++++|+|.||.+. +++.
T Consensus 76 ~~~Qv~~vce~l~~~~~L~~G~naIGfSQGglflRa~ie 114 (306)
T PLN02606 76 LRQQASIACEKIKQMKELSEGYNIVAESQGNLVARGLIE 114 (306)
T ss_pred HHHHHHHHHHHHhcchhhcCceEEEEEcchhHHHHHHHH
Confidence 4455555444444322 22469999999999999 8888
No 222
>PF00135 COesterase: Carboxylesterase family The prints entry is specific to acetylcholinesterase; InterPro: IPR002018 Higher eukaryotes have many distinct esterases. Among the different types are those which act on carboxylic esters (3.1.1 from EC). Carboxyl-esterases have been classified into three categories (A, B and C) on the basis of differential patterns of inhibition by organophosphates. The sequence of a number of type-B carboxylesterases indicates [, , ] that the majority are evolutionary related. As is the case for lipases and serine proteases, the catalytic apparatus of esterases involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.; PDB: 3B3Q_A 1CLE_B 1GQS_A 2VJD_A 1HBJ_A 2C5G_A 1U65_A 2WG1_A 1FSS_A 3M3D_A ....
Probab=89.15 E-value=1.2 Score=35.75 Aligned_cols=79 Identities=9% Similarity=-0.021 Sum_probs=43.7
Q ss_pred hhhhhcCcEEEEeCCCC----CCCCCCCC-C-CC--hhhHHHHHHHHHHhc---CC-CCceEEEEEcchHHHH-HHhhcc
Q 044659 3 DFMDELGVYVLTFDRTG----YGESDPKP-K-RP--VKIEAFDIQELANQL---NL-GHKFDVIGISILTYLF-GLVSNA 69 (169)
Q Consensus 3 ~~l~~~g~~v~~~d~~G----~G~s~~~~-~-~~--~~~~~~~~~~~~~~~---~~-~~~~~l~G~S~Gg~ia-~~~~~~ 69 (169)
..+.+.+.-||++.+|= +-.+.... . .+ +.|+..-++.+-+.+ |- .++|.|+|+|.||..+ ..+..
T Consensus 150 ~~~~~~~vivVt~nYRlg~~Gfl~~~~~~~~~gN~Gl~Dq~~AL~WV~~nI~~FGGDp~~VTl~G~SAGa~sv~~~l~s- 228 (535)
T PF00135_consen 150 SLAASKDVIVVTINYRLGAFGFLSLGDLDAPSGNYGLLDQRLALKWVQDNIAAFGGDPDNVTLFGQSAGAASVSLLLLS- 228 (535)
T ss_dssp HHHHHHTSEEEEE----HHHHH-BSSSTTSHBSTHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHG-
T ss_pred ccccCCCEEEEEecccccccccccccccccCchhhhhhhhHHHHHHHHhhhhhcccCCcceeeeeecccccccceeeec-
Confidence 34567788888888873 22221111 1 22 666666665555444 42 2689999999999999 55551
Q ss_pred ccCCCc--ceEEEEee
Q 044659 70 HHTGIP--AGVALVVL 83 (169)
Q Consensus 70 ~~~~~p--~~~~~~~~ 83 (169)
+...+ .++++.++
T Consensus 229 -p~~~~LF~raI~~SG 243 (535)
T PF00135_consen 229 -PSSKGLFHRAILQSG 243 (535)
T ss_dssp -GGGTTSBSEEEEES-
T ss_pred -ccccccccccccccc
Confidence 11122 66677666
No 223
>KOG2541 consensus Palmitoyl protein thioesterase [Lipid transport and metabolism; Posttranslational modification, protein turnover, chaperones]
Probab=88.57 E-value=1.4 Score=32.42 Aligned_cols=37 Identities=16% Similarity=0.180 Sum_probs=26.2
Q ss_pred hhhHHHHHHHHHHhcC-CCCceEEEEEcchHHHH-HHhh
Q 044659 31 VKIEAFDIQELANQLN-LGHKFDVIGISILTYLF-GLVS 67 (169)
Q Consensus 31 ~~~~~~~~~~~~~~~~-~~~~~~l~G~S~Gg~ia-~~~~ 67 (169)
+.+.++.+.+.++.-. +.+-++++|.|.||.++ +++.
T Consensus 73 l~~Qv~~~ce~v~~m~~lsqGynivg~SQGglv~Raliq 111 (296)
T KOG2541|consen 73 LWEQVDVACEKVKQMPELSQGYNIVGYSQGGLVARALIQ 111 (296)
T ss_pred HHHHHHHHHHHHhcchhccCceEEEEEccccHHHHHHHH
Confidence 5555555555554332 33569999999999999 8888
No 224
>PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A ....
Probab=88.16 E-value=0.75 Score=35.73 Aligned_cols=44 Identities=18% Similarity=0.342 Sum_probs=29.0
Q ss_pred CCCceEEEEeCCCCcchH--HHHHHHhCC--------------------------CcEEEEecCCCceeeec
Q 044659 125 NEESVYLCQGHKDKLVPF--HRYRAKKLP--------------------------RIRYHEGSAGGHLMIHE 168 (169)
Q Consensus 125 ~~~P~l~~~g~~D~~v~~--~~~~~~~~~--------------------------~~~~~~~~~~gH~~~~e 168 (169)
-+++||+.+|+.|-+++. .+...+.+. +..+..+.++||+++..
T Consensus 329 ~~irVLiy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~f~~~~~~~~~~~~G~~k~~~~ltf~~V~~AGHmvP~d 400 (415)
T PF00450_consen 329 NGIRVLIYNGDLDLICNFLGTERWIDNLNWSGKDGFRQWPRKVNGQVAGYVKQYGNLTFVTVRGAGHMVPQD 400 (415)
T ss_dssp TT-EEEEEEETT-SSS-HHHHHHHHHCTECTEEEEEEEEEEETTCSEEEEEEEETTEEEEEETT--SSHHHH
T ss_pred ccceeEEeccCCCEEEEeccchhhhhccccCcccccccccccccccccceeEEeccEEEEEEcCCcccChhh
Confidence 347899999999999999 555555542 34578889999998764
No 225
>PF10605 3HBOH: 3HB-oligomer hydrolase (3HBOH) ; InterPro: IPR016582 This entry represents a group of predicted D-(-)-3-hydroxybutyrate oligomer hydrolases (also known as 3HB-oligomer hydrolase), which function in the degradation of poly-3-hydroxybutyrate (PHB). These enzymes catalyse the hydrolysis of D(-)-3-hydroxybutyrate oligomers (3HB-oligomers) into 3HB-monomers [, ].; GO: 0047989 hydroxybutyrate-dimer hydrolase activity, 0019605 butyrate metabolic process, 0005615 extracellular space
Probab=87.58 E-value=0.55 Score=38.39 Aligned_cols=41 Identities=24% Similarity=0.356 Sum_probs=31.8
Q ss_pred CCceEEEEeCCCCcchH---HHHHHHhCC-------CcEEEEecCCCceee
Q 044659 126 EESVYLCQGHKDKLVPF---HRYRAKKLP-------RIRYHEGSAGGHLMI 166 (169)
Q Consensus 126 ~~P~l~~~g~~D~~v~~---~~~~~~~~~-------~~~~~~~~~~gH~~~ 166 (169)
.+|.+++||..|.++|. ++.+..... ..++++++++-|+-.
T Consensus 555 GKPaIiVhGR~DaLlPvnh~Sr~Y~~ln~~~eG~~s~lrYyeV~naqHfDa 605 (690)
T PF10605_consen 555 GKPAIIVHGRSDALLPVNHTSRPYLGLNRQVEGRASRLRYYEVTNAQHFDA 605 (690)
T ss_pred CCceEEEecccceecccCCCchHHHHHhhhhcccccceeEEEecCCeechh
Confidence 78999999999999999 555544332 367888899888854
No 226
>PF09994 DUF2235: Uncharacterized alpha/beta hydrolase domain (DUF2235); InterPro: IPR018712 This domain has no known function.
Probab=86.57 E-value=2.1 Score=31.73 Aligned_cols=29 Identities=17% Similarity=0.287 Sum_probs=22.6
Q ss_pred HHHHHhcCCCCceEEEEEcchHHHH-HHhh
Q 044659 39 QELANQLNLGHKFDVIGISILTYLF-GLVS 67 (169)
Q Consensus 39 ~~~~~~~~~~~~~~l~G~S~Gg~ia-~~~~ 67 (169)
..+++....+.+|.++|+|-|++.| .++.
T Consensus 82 ~~l~~~~~~gd~I~lfGFSRGA~~AR~~a~ 111 (277)
T PF09994_consen 82 RFLSKNYEPGDRIYLFGFSRGAYTARAFAN 111 (277)
T ss_pred HHHHhccCCcceEEEEecCccHHHHHHHHH
Confidence 3344555655789999999999999 7776
No 227
>PTZ00472 serine carboxypeptidase (CBP1); Provisional
Probab=86.26 E-value=1 Score=36.04 Aligned_cols=18 Identities=17% Similarity=0.318 Sum_probs=16.0
Q ss_pred CCCceEEEEeCCCCcchH
Q 044659 125 NEESVYLCQGHKDKLVPF 142 (169)
Q Consensus 125 ~~~P~l~~~g~~D~~v~~ 142 (169)
..++|++..|+.|.+++.
T Consensus 363 ~gikVLiYnGd~D~icn~ 380 (462)
T PTZ00472 363 DGVRVMIYAGDMDFICNW 380 (462)
T ss_pred cCceEEEEECCcCeecCc
Confidence 357899999999999998
No 228
>COG2272 PnbA Carboxylesterase type B [Lipid metabolism]
Probab=85.71 E-value=4.8 Score=32.30 Aligned_cols=64 Identities=11% Similarity=0.061 Sum_probs=38.8
Q ss_pred hhhhcC-cEEEEeCCCC----------CCCCCCCCCC-ChhhHHHHHHH---HHHhcCC-CCceEEEEEcchHHHH-HHh
Q 044659 4 FMDELG-VYVLTFDRTG----------YGESDPKPKR-PVKIEAFDIQE---LANQLNL-GHKFDVIGISILTYLF-GLV 66 (169)
Q Consensus 4 ~l~~~g-~~v~~~d~~G----------~G~s~~~~~~-~~~~~~~~~~~---~~~~~~~-~~~~~l~G~S~Gg~ia-~~~ 66 (169)
.|++.| +-|+++++|= ++..+....+ .+.|+..-++. -+++++- .+.|.|+|+|.||+.+ .++
T Consensus 119 ~La~~g~vVvVSvNYRLG~lGfL~~~~~~~~~~~~~n~Gl~DqilALkWV~~NIe~FGGDp~NVTl~GeSAGa~si~~Ll 198 (491)
T COG2272 119 ALAARGDVVVVSVNYRLGALGFLDLSSLDTEDAFASNLGLLDQILALKWVRDNIEAFGGDPQNVTLFGESAGAASILTLL 198 (491)
T ss_pred HHHhcCCEEEEEeCcccccceeeehhhccccccccccccHHHHHHHHHHHHHHHHHhCCCccceEEeeccchHHHHHHhh
Confidence 456666 8888888773 1211111111 25555555444 4455653 2679999999999999 555
Q ss_pred h
Q 044659 67 S 67 (169)
Q Consensus 67 ~ 67 (169)
+
T Consensus 199 a 199 (491)
T COG2272 199 A 199 (491)
T ss_pred c
Confidence 4
No 229
>PLN03016 sinapoylglucose-malate O-sinapoyltransferase
Probab=85.57 E-value=2.2 Score=33.88 Aligned_cols=58 Identities=21% Similarity=0.198 Sum_probs=36.0
Q ss_pred cEEEEeC-CCCCCCCCCCCCC--C-hhhHHHHHHHHHHh----cC--CCCceEEEEEcchHHHH-HHhh
Q 044659 10 VYVLTFD-RTGYGESDPKPKR--P-VKIEAFDIQELANQ----LN--LGHKFDVIGISILTYLF-GLVS 67 (169)
Q Consensus 10 ~~v~~~d-~~G~G~s~~~~~~--~-~~~~~~~~~~~~~~----~~--~~~~~~l~G~S~Gg~ia-~~~~ 67 (169)
.+++-+| ..|.|.|...... . -.+.++++.+++.. .. ...+++|.|.|+||..+ .++.
T Consensus 116 anllfiDqPvGtGfSy~~~~~~~~~d~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~la~ 184 (433)
T PLN03016 116 ANIIFLDQPVGSGFSYSKTPIDKTGDISEVKRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQ 184 (433)
T ss_pred CcEEEecCCCCCCccCCCCCCCccCCHHHHHHHHHHHHHHHHhChhhcCCCEEEEccCccceehHHHHH
Confidence 6889999 7788988543221 1 12233455444433 21 12679999999999877 5544
No 230
>PF06850 PHB_depo_C: PHB de-polymerase C-terminus; InterPro: IPR009656 This entry represents the C terminus of bacterial poly(3-hydroxybutyrate) (PHB) de-polymerase. This degrades PHB granules to oligomers and monomers of 3-hydroxy-butyric acid.
Probab=85.39 E-value=0.83 Score=31.96 Aligned_cols=42 Identities=19% Similarity=0.257 Sum_probs=31.7
Q ss_pred CCceEEEEeCCCCcchH-----HHHHHHhCCC--cEEEEecCCCceeee
Q 044659 126 EESVYLCQGHKDKLVPF-----HRYRAKKLPR--IRYHEGSAGGHLMIH 167 (169)
Q Consensus 126 ~~P~l~~~g~~D~~v~~-----~~~~~~~~~~--~~~~~~~~~gH~~~~ 167 (169)
+++++-|=|++|.+..+ +..+...+|. ...++.|++||+-.+
T Consensus 134 ~taLlTVEGe~DDIsg~GQT~AA~~LC~glp~~~k~~~~~~g~GHYGlF 182 (202)
T PF06850_consen 134 RTALLTVEGERDDISGPGQTHAAHDLCTGLPADMKRHHLQPGVGHYGLF 182 (202)
T ss_pred cceeEEeecCcccCCcchHHHHHHHHhcCCCHHHhhhcccCCCCeeecc
Confidence 33566799999999988 5566666664 567788999999654
No 231
>KOG4372 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=84.73 E-value=0.47 Score=36.77 Aligned_cols=36 Identities=14% Similarity=0.121 Sum_probs=26.2
Q ss_pred hhhHHHHHHHHHHhcCCCCceEEEEEcchHHHH-HHhh
Q 044659 31 VKIEAFDIQELANQLNLGHKFDVIGISILTYLF-GLVS 67 (169)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~ia-~~~~ 67 (169)
-+..++++.+.+....+ ++|.++|||+||.++ .+..
T Consensus 133 G~Rla~~~~e~~~~~si-~kISfvghSLGGLvar~AIg 169 (405)
T KOG4372|consen 133 GERLAEEVKETLYDYSI-EKISFVGHSLGGLVARYAIG 169 (405)
T ss_pred ecccHHHHhhhhhcccc-ceeeeeeeecCCeeeeEEEE
Confidence 44455555666666667 799999999999999 4444
No 232
>COG3673 Uncharacterized conserved protein [Function unknown]
Probab=84.26 E-value=3.8 Score=31.16 Aligned_cols=63 Identities=17% Similarity=0.139 Sum_probs=40.0
Q ss_pred hhh-cCcEEEEeCCCCCCCCCCCC---------C---CC------hhhHHHHHHHHHHhcCCCCceEEEEEcchHHHH-H
Q 044659 5 MDE-LGVYVLTFDRTGYGESDPKP---------K---RP------VKIEAFDIQELANQLNLGHKFDVIGISILTYLF-G 64 (169)
Q Consensus 5 l~~-~g~~v~~~d~~G~G~s~~~~---------~---~~------~~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~ia-~ 64 (169)
|.+ .+.+++++-.+|.|.-.-.. . .+ .......-..+++....+++|+++|+|-|+.++ .
T Consensus 59 l~r~d~~~qv~yYd~GVGt~Gfdavvdvrrrl~~~~~gsmFg~gL~~nI~~AYrFL~~~yepGD~Iy~FGFSRGAf~aRV 138 (423)
T COG3673 59 LQRADGVTQVIYYDEGVGTGGFDAVVDVRRRLEKLSGGSMFGQGLVQNIREAYRFLIFNYEPGDEIYAFGFSRGAFSARV 138 (423)
T ss_pred HhcCCCceEEEEecCCcccccchhhHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEeeccchhHHHHH
Confidence 444 57899999999999542110 0 01 111112223355666667899999999999999 5
Q ss_pred Hhh
Q 044659 65 LVS 67 (169)
Q Consensus 65 ~~~ 67 (169)
++.
T Consensus 139 lag 141 (423)
T COG3673 139 LAG 141 (423)
T ss_pred HHH
Confidence 555
No 233
>PLN02209 serine carboxypeptidase
Probab=83.92 E-value=3.3 Score=32.93 Aligned_cols=77 Identities=23% Similarity=0.254 Sum_probs=45.2
Q ss_pred cEEEEeC-CCCCCCCCCCCC---CChhhHHHHHHHHHHh----cC--CCCceEEEEEcchHHHH-HHhhcccc-------
Q 044659 10 VYVLTFD-RTGYGESDPKPK---RPVKIEAFDIQELANQ----LN--LGHKFDVIGISILTYLF-GLVSNAHH------- 71 (169)
Q Consensus 10 ~~v~~~d-~~G~G~s~~~~~---~~~~~~~~~~~~~~~~----~~--~~~~~~l~G~S~Gg~ia-~~~~~~~~------- 71 (169)
.+++-+| ..|.|.|..... .+.++.++++.+++.. .. ...+++|.|.|+||..+ .++.....
T Consensus 118 anllfiDqPvGtGfSy~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~~a~~i~~~~~~~~~ 197 (437)
T PLN02209 118 ANIIFLDQPVGSGFSYSKTPIERTSDTSEVKKIHEFLQKWLIKHPQFLSNPFYVVGDSYSGMIVPALVHEISKGNYICCN 197 (437)
T ss_pred CcEEEecCCCCCCccCCCCCCCccCCHHHHHHHHHHHHHHHHhCccccCCCEEEEecCcCceehHHHHHHHHhhcccccC
Confidence 6889999 778888853321 1233344555555443 22 12579999999999877 54442111
Q ss_pred CCCc-ceEEEEeecch
Q 044659 72 TGIP-AGVALVVLVIN 86 (169)
Q Consensus 72 ~~~p-~~~~~~~~~~~ 86 (169)
...+ +++++..+...
T Consensus 198 ~~inl~Gi~igng~td 213 (437)
T PLN02209 198 PPINLQGYVLGNPITH 213 (437)
T ss_pred CceeeeeEEecCcccC
Confidence 1123 67777766543
No 234
>KOG1282 consensus Serine carboxypeptidases (lysosomal cathepsin A) [Posttranslational modification, protein turnover, chaperones; Amino acid transport and metabolism]
Probab=83.30 E-value=1.9 Score=34.33 Aligned_cols=58 Identities=21% Similarity=0.183 Sum_probs=34.3
Q ss_pred cEEEEeCCC-CCCCCCCCCC----CChhhHHHHHHHHH----HhcC--CCCceEEEEEcchHHHH-HHhh
Q 044659 10 VYVLTFDRT-GYGESDPKPK----RPVKIEAFDIQELA----NQLN--LGHKFDVIGISILTYLF-GLVS 67 (169)
Q Consensus 10 ~~v~~~d~~-G~G~s~~~~~----~~~~~~~~~~~~~~----~~~~--~~~~~~l~G~S~Gg~ia-~~~~ 67 (169)
-+++-.|.| |-|.|-.... .+.+..++|+-.++ ++.. .+.+++|.|-|.+|..+ .++.
T Consensus 118 aNiLfLd~PvGvGFSYs~~~~~~~~~D~~~A~d~~~FL~~wf~kfPey~~~~fyI~GESYAG~YVP~La~ 187 (454)
T KOG1282|consen 118 ANILFLDQPVGVGFSYSNTSSDYKTGDDGTAKDNYEFLQKWFEKFPEYKSNDFYIAGESYAGHYVPALAQ 187 (454)
T ss_pred ccEEEEecCCcCCccccCCCCcCcCCcHHHHHHHHHHHHHHHHhChhhcCCCeEEecccccceehHHHHH
Confidence 356666665 6777743322 23445555554433 3332 13689999999999777 5554
No 235
>PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase
Probab=80.36 E-value=3.2 Score=31.41 Aligned_cols=41 Identities=24% Similarity=0.380 Sum_probs=30.1
Q ss_pred CCceEEEEeCCCCcchH--HHHHHHhCC------------------------C-cEEEEecCCCceee
Q 044659 126 EESVYLCQGHKDKLVPF--HRYRAKKLP------------------------R-IRYHEGSAGGHLMI 166 (169)
Q Consensus 126 ~~P~l~~~g~~D~~v~~--~~~~~~~~~------------------------~-~~~~~~~~~gH~~~ 166 (169)
.++||+..|+.|.+++. .+.+.+.+. + ..+..+.++||+++
T Consensus 233 ~i~VliY~Gd~D~icn~~g~~~wi~~L~w~~~~~~~~w~~~~~~~G~vk~y~~~ltf~~V~~AGHmV~ 300 (319)
T PLN02213 233 GYRSLIYSGDHDIAVPFLATQAWIRSLNYSPIHNWRPWMINNQIAGYTRAYSNKMTFATIKAGGHTAE 300 (319)
T ss_pred CceEEEEECCcCeeCCcHhHHHHHHhcCCCCCCCCccccCCCEeeeEEEEecCcceEEEEcCCCCCCC
Confidence 47899999999999998 444433332 2 55677778999985
No 236
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=78.44 E-value=2.6 Score=33.83 Aligned_cols=75 Identities=15% Similarity=-0.046 Sum_probs=47.4
Q ss_pred hhcCcEEEEeCCCCCCCCCC---CC-CCC---hhhH--------HHHHHHHHHhc-CC-CCceEEEEEcchHHHH-HHhh
Q 044659 6 DELGVYVLTFDRTGYGESDP---KP-KRP---VKIE--------AFDIQELANQL-NL-GHKFDVIGISILTYLF-GLVS 67 (169)
Q Consensus 6 ~~~g~~v~~~d~~G~G~s~~---~~-~~~---~~~~--------~~~~~~~~~~~-~~-~~~~~l~G~S~Gg~ia-~~~~ 67 (169)
...||.++.-|. ||..+.. .. ..+ +.++ +..-++++++. +. .++-+..|.|-||.=+ ..+.
T Consensus 56 ~~~G~A~~~TD~-Gh~~~~~~~~~~~~~n~~~~~dfa~ra~h~~~~~aK~l~~~~Yg~~p~~sY~~GcS~GGRqgl~~AQ 134 (474)
T PF07519_consen 56 LARGYATASTDS-GHQGSAGSDDASFGNNPEALLDFAYRALHETTVVAKALIEAFYGKAPKYSYFSGCSTGGRQGLMAAQ 134 (474)
T ss_pred hhcCeEEEEecC-CCCCCcccccccccCCHHHHHHHHhhHHHHHHHHHHHHHHHHhCCCCCceEEEEeCCCcchHHHHHH
Confidence 456898888886 5554432 11 111 2222 22223344443 21 1568999999999999 9999
Q ss_pred ccccCCCc---ceEEEEeecch
Q 044659 68 NAHHTGIP---AGVALVVLVIN 86 (169)
Q Consensus 68 ~~~~~~~p---~~~~~~~~~~~ 86 (169)
++| .+++.-+|..+
T Consensus 135 -----ryP~dfDGIlAgaPA~~ 151 (474)
T PF07519_consen 135 -----RYPEDFDGILAGAPAIN 151 (474)
T ss_pred -----hChhhcCeEEeCCchHH
Confidence 999 88888888765
No 237
>TIGR03712 acc_sec_asp2 accessory Sec system protein Asp2. This protein is designated Asp2 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.
Probab=77.79 E-value=3.8 Score=32.88 Aligned_cols=49 Identities=18% Similarity=0.162 Sum_probs=35.5
Q ss_pred HHHHHHHHHHhcCCC-CceEEEEEcchHHHH-HHhhccccCCC-cceEEEEeecchh
Q 044659 34 EAFDIQELANQLNLG-HKFDVIGISILTYLF-GLVSNAHHTGI-PAGVALVVLVINY 87 (169)
Q Consensus 34 ~~~~~~~~~~~~~~~-~~~~l~G~S~Gg~ia-~~~~~~~~~~~-p~~~~~~~~~~~~ 87 (169)
..+.|.+.++.|+.+ +.++|-|.|||..=| .+++ .. |.++++--|..+.
T Consensus 341 I~~~I~~~L~~LgF~~~qLILSGlSMGTfgAlYYga-----~l~P~AIiVgKPL~NL 392 (511)
T TIGR03712 341 IINVIQEKLDYLGFDHDQLILSGLSMGTFGALYYGA-----KLSPHAIIVGKPLVNL 392 (511)
T ss_pred HHHHHHHHHHHhCCCHHHeeeccccccchhhhhhcc-----cCCCceEEEcCcccch
Confidence 334556677888853 569999999999999 7777 54 5777766666553
No 238
>PLN02209 serine carboxypeptidase
Probab=76.98 E-value=4.7 Score=32.06 Aligned_cols=41 Identities=22% Similarity=0.371 Sum_probs=30.9
Q ss_pred CCceEEEEeCCCCcchH--HHHHHHhC------------------------CC-cEEEEecCCCceee
Q 044659 126 EESVYLCQGHKDKLVPF--HRYRAKKL------------------------PR-IRYHEGSAGGHLMI 166 (169)
Q Consensus 126 ~~P~l~~~g~~D~~v~~--~~~~~~~~------------------------~~-~~~~~~~~~gH~~~ 166 (169)
.+++++..|+.|.+++. .+...+.+ .+ ..+..+.++||+++
T Consensus 351 girVLiY~GD~D~icn~~Gte~wi~~L~w~~~~~~~~w~~~~q~aG~vk~y~n~Ltfv~V~~AGHmVp 418 (437)
T PLN02209 351 GYRSLIFSGDHDITMPFQATQAWIKSLNYSIIDDWRPWMIKGQIAGYTRTYSNKMTFATVKGGGHTAE 418 (437)
T ss_pred CceEEEEECCccccCCcHhHHHHHHhcCCccCCCeeeeEECCEeeeEEEEeCCceEEEEEcCCCCCcC
Confidence 46899999999999999 45554444 22 56677888999875
No 239
>PF00698 Acyl_transf_1: Acyl transferase domain; InterPro: IPR014043 Enzymes like bacterial malonyl CoA-acly carrier protein transacylase (2.3.1.39 from EC) and eukaryotic fatty acid synthase (2.3.1.85 from EC) that are involved in fatty acid biosynthesis belong to this group. Also included are the polyketide synthases 6-methylsalicylic acid synthase (2.3.1 from EC), a multifunctional enzyme that involved in the biosynthesis of patulin and conidial green pigment synthase (2.3.1 from EC).; PDB: 3HHD_C 2JFD_D 2JFK_A 3G87_A 3IM9_A 2QO3_B 3IM8_A 3EZO_A 2QJ3_A 2QC3_A ....
Probab=76.78 E-value=2.9 Score=31.50 Aligned_cols=28 Identities=21% Similarity=0.166 Sum_probs=22.2
Q ss_pred HHHHHhcCCCCceEEEEEcchHHHH-HHhh
Q 044659 39 QELANQLNLGHKFDVIGISILTYLF-GLVS 67 (169)
Q Consensus 39 ~~~~~~~~~~~~~~l~G~S~Gg~ia-~~~~ 67 (169)
.++++..++ ++-.++|||+|=+.| .++.
T Consensus 75 ~~~l~~~Gi-~P~~v~GhSlGE~aA~~aaG 103 (318)
T PF00698_consen 75 ARLLRSWGI-KPDAVIGHSLGEYAALVAAG 103 (318)
T ss_dssp HHHHHHTTH-CESEEEESTTHHHHHHHHTT
T ss_pred hhhhccccc-ccceeeccchhhHHHHHHCC
Confidence 445577777 788999999999988 5555
No 240
>COG2939 Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism]
Probab=76.47 E-value=5.1 Score=32.20 Aligned_cols=61 Identities=13% Similarity=0.024 Sum_probs=37.5
Q ss_pred EEEEeC-CCCCCCCCC-CCC--CChhhHHHHHHHHHHhc--------CCCCceEEEEEcchHHHH-HHhhcccc
Q 044659 11 YVLTFD-RTGYGESDP-KPK--RPVKIEAFDIQELANQL--------NLGHKFDVIGISILTYLF-GLVSNAHH 71 (169)
Q Consensus 11 ~v~~~d-~~G~G~s~~-~~~--~~~~~~~~~~~~~~~~~--------~~~~~~~l~G~S~Gg~ia-~~~~~~~~ 71 (169)
.++-+| .-|-|.|.. .++ .+......|+..+.+.+ .+..+.+|+|-|+||.-+ .+|..+.+
T Consensus 148 dLvFiDqPvGTGfS~a~~~e~~~d~~~~~~D~~~~~~~f~~~fp~~~r~~~~~~L~GESYgg~yip~~A~~L~~ 221 (498)
T COG2939 148 DLVFIDQPVGTGFSRALGDEKKKDFEGAGKDVYSFLRLFFDKFPHYARLLSPKFLAGESYGGHYIPVFAHELLE 221 (498)
T ss_pred ceEEEecCcccCcccccccccccchhccchhHHHHHHHHHHHHHHHhhhcCceeEeeccccchhhHHHHHHHHH
Confidence 567788 668888864 221 23444455554444322 122589999999999988 55554343
No 241
>PRK10279 hypothetical protein; Provisional
Probab=75.74 E-value=4.3 Score=30.53 Aligned_cols=28 Identities=14% Similarity=0.033 Sum_probs=21.9
Q ss_pred HHHHHhcCCCCceEEEEEcchHHHH-HHhh
Q 044659 39 QELANQLNLGHKFDVIGISILTYLF-GLVS 67 (169)
Q Consensus 39 ~~~~~~~~~~~~~~l~G~S~Gg~ia-~~~~ 67 (169)
.+.++..++ ..-.++|.|+|+.++ .++.
T Consensus 24 L~aL~E~gi-~~d~i~GtS~GAlvga~yA~ 52 (300)
T PRK10279 24 INALKKVGI-EIDIVAGCSIGSLVGAAYAC 52 (300)
T ss_pred HHHHHHcCC-CcCEEEEEcHHHHHHHHHHc
Confidence 344455677 677899999999999 7776
No 242
>cd07225 Pat_PNPLA6_PNPLA7 Patatin-like phospholipase domain containing protein 6 and protein 7. Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are 60% identical to each other. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologous to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and pancreatic tissue. NRE
Probab=75.49 E-value=5.1 Score=30.22 Aligned_cols=28 Identities=14% Similarity=-0.032 Sum_probs=21.6
Q ss_pred HHHHHhcCCCCceEEEEEcchHHHH-HHhh
Q 044659 39 QELANQLNLGHKFDVIGISILTYLF-GLVS 67 (169)
Q Consensus 39 ~~~~~~~~~~~~~~l~G~S~Gg~ia-~~~~ 67 (169)
.+.++..++ ..-.++|.|+|+.++ .++.
T Consensus 34 L~aLee~gi-~~d~v~GtSaGAi~ga~ya~ 62 (306)
T cd07225 34 IKALEEAGI-PVDMVGGTSIGAFIGALYAE 62 (306)
T ss_pred HHHHHHcCC-CCCEEEEECHHHHHHHHHHc
Confidence 444455577 566899999999999 8887
No 243
>COG4947 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=75.42 E-value=3.9 Score=28.26 Aligned_cols=43 Identities=19% Similarity=0.061 Sum_probs=31.8
Q ss_pred HHHHHhcCCCCceEEEEEcchHHHH-HHhhccccCCCc---ceEEEEeecchh
Q 044659 39 QELANQLNLGHKFDVIGISILTYLF-GLVSNAHHTGIP---AGVALVVLVINY 87 (169)
Q Consensus 39 ~~~~~~~~~~~~~~l~G~S~Gg~ia-~~~~~~~~~~~p---~~~~~~~~~~~~ 87 (169)
+.+++..-. .+..+-|.||||+-| .+.- ++| .+++.+++....
T Consensus 92 rYv~eEalp-gs~~~sgcsmGayhA~nfvf-----rhP~lftkvialSGvYda 138 (227)
T COG4947 92 RYVIEEALP-GSTIVSGCSMGAYHAANFVF-----RHPHLFTKVIALSGVYDA 138 (227)
T ss_pred HHHHHhhcC-CCccccccchhhhhhhhhhe-----eChhHhhhheeecceeeH
Confidence 334443323 457789999999999 8888 899 788888876654
No 244
>PLN03016 sinapoylglucose-malate O-sinapoyltransferase
Probab=75.20 E-value=5.8 Score=31.52 Aligned_cols=41 Identities=24% Similarity=0.380 Sum_probs=30.5
Q ss_pred CCceEEEEeCCCCcchH--HHHHHHhCC------------------------C-cEEEEecCCCceee
Q 044659 126 EESVYLCQGHKDKLVPF--HRYRAKKLP------------------------R-IRYHEGSAGGHLMI 166 (169)
Q Consensus 126 ~~P~l~~~g~~D~~v~~--~~~~~~~~~------------------------~-~~~~~~~~~gH~~~ 166 (169)
.++||+..|+.|.+++. .+...+.+. + ..+.++.++||+++
T Consensus 347 ~irVLiY~Gd~D~icn~~Gt~~wi~~L~w~~~~~~~~w~~~~~~~G~vk~y~n~ltfv~V~~AGHmVp 414 (433)
T PLN03016 347 GYRSLIYSGDHDIAVPFLATQAWIRSLNYSPIHNWRPWMINNQIAGYTRAYSNKMTFATIKAGGHTAE 414 (433)
T ss_pred CceEEEEECCccccCCcHhHHHHHHhCCCCCCCCcccccCCCEeeeEEEEeCCceEEEEEcCCCCCCC
Confidence 47899999999999999 444444331 2 45677788999985
No 245
>smart00827 PKS_AT Acyl transferase domain in polyketide synthase (PKS) enzymes.
Probab=74.67 E-value=4.1 Score=30.21 Aligned_cols=28 Identities=14% Similarity=0.042 Sum_probs=21.9
Q ss_pred HHHHHhcCCCCceEEEEEcchHHHH-HHhh
Q 044659 39 QELANQLNLGHKFDVIGISILTYLF-GLVS 67 (169)
Q Consensus 39 ~~~~~~~~~~~~~~l~G~S~Gg~ia-~~~~ 67 (169)
.++++.+++ ++-.++|||+|-+.| .++.
T Consensus 73 ~~~l~~~Gi-~p~~~~GhSlGE~aA~~~ag 101 (298)
T smart00827 73 ARLWRSWGV-RPDAVVGHSLGEIAAAYVAG 101 (298)
T ss_pred HHHHHHcCC-cccEEEecCHHHHHHHHHhC
Confidence 345577788 788999999999998 5554
No 246
>COG1752 RssA Predicted esterase of the alpha-beta hydrolase superfamily [General function prediction only]
Probab=74.54 E-value=4.3 Score=30.48 Aligned_cols=29 Identities=7% Similarity=-0.046 Sum_probs=23.1
Q ss_pred HHHHHHhcCCCCceEEEEEcchHHHH-HHhh
Q 044659 38 IQELANQLNLGHKFDVIGISILTYLF-GLVS 67 (169)
Q Consensus 38 ~~~~~~~~~~~~~~~l~G~S~Gg~ia-~~~~ 67 (169)
+.+.++..++ ..-.|.|.|+|+.++ .++.
T Consensus 29 Vl~aL~e~gi-~~~~iaGtS~GAiva~l~A~ 58 (306)
T COG1752 29 VLKALEEAGI-PIDVIAGTSAGAIVAALYAA 58 (306)
T ss_pred HHHHHHHcCC-CccEEEecCHHHHHHHHHHc
Confidence 3455566667 678999999999999 7777
No 247
>PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases. All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family.
Probab=74.38 E-value=18 Score=24.73 Aligned_cols=53 Identities=19% Similarity=0.166 Sum_probs=35.9
Q ss_pred hhhcCcEEEEeCCCCCCCCCCCCCCChhhHHHHHHHHHHhcCCCCceEEEEEcch
Q 044659 5 MDELGVYVLTFDRTGYGESDPKPKRPVKIEAFDIQELANQLNLGHKFDVIGISIL 59 (169)
Q Consensus 5 l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~G 59 (169)
|.+.|++.+.+|.=..= +.+....-..+..+.+.++.+..+. +++.|+..|.|
T Consensus 36 Lk~~Gik~li~DkDNTL-~~~~~~~i~~~~~~~~~~l~~~~~~-~~v~IvSNsaG 88 (168)
T PF09419_consen 36 LKKKGIKALIFDKDNTL-TPPYEDEIPPEYAEWLNELKKQFGK-DRVLIVSNSAG 88 (168)
T ss_pred hhhcCceEEEEcCCCCC-CCCCcCcCCHHHHHHHHHHHHHCCC-CeEEEEECCCC
Confidence 78899999999997652 2222222244555556666666655 58999999986
No 248
>TIGR03131 malonate_mdcH malonate decarboxylase, epsilon subunit. Members of this protein family are the epsilon subunit of malonate decarboxylase. This subunit has malonyl-CoA/dephospho-CoA acyltransferase activity. Malonate decarboxylase may be a soluble enzyme, or linked to membrane subunits and active as a sodium pump. The epsilon subunit is closely related to the malonyl CoA-acyl carrier protein (ACP) transacylase family described by TIGR00128, but acts on an ACP subunit of malonate decarboxylase that has an unusual coenzyme A derivative as its prothetic group.
Probab=72.27 E-value=5.1 Score=29.75 Aligned_cols=28 Identities=18% Similarity=0.006 Sum_probs=21.5
Q ss_pred HHHHHhcCCCCceEEEEEcchHHHH-HHhh
Q 044659 39 QELANQLNLGHKFDVIGISILTYLF-GLVS 67 (169)
Q Consensus 39 ~~~~~~~~~~~~~~l~G~S~Gg~ia-~~~~ 67 (169)
.+++++.+. ++-.++|||+|=+.| .++.
T Consensus 67 ~~~l~~~g~-~P~~v~GhS~GE~aAa~~aG 95 (295)
T TIGR03131 67 WRALLALLP-RPSAVAGYSVGEYAAAVVAG 95 (295)
T ss_pred HHHHHhcCC-CCcEEeecCHHHHHHHHHhC
Confidence 445567777 789999999999888 5443
No 249
>COG0218 Predicted GTPase [General function prediction only]
Probab=70.68 E-value=6.5 Score=27.69 Aligned_cols=32 Identities=19% Similarity=0.131 Sum_probs=20.8
Q ss_pred EEEeCCCCCCCCCCCCCCChhhHHHHHHHHHHh
Q 044659 12 VLTFDRTGYGESDPKPKRPVKIEAFDIQELANQ 44 (169)
Q Consensus 12 v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~ 44 (169)
....|+||||....+. .--+.|.+.+.+.++.
T Consensus 72 ~~lVDlPGYGyAkv~k-~~~e~w~~~i~~YL~~ 103 (200)
T COG0218 72 LRLVDLPGYGYAKVPK-EVKEKWKKLIEEYLEK 103 (200)
T ss_pred EEEEeCCCcccccCCH-HHHHHHHHHHHHHHhh
Confidence 6789999999875444 2255566656555543
No 250
>cd07198 Patatin Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes PNPLA (1-9), TGL (3-5), ExoU-like, and SDP1-like subfamilies. There are some additional hypothetical proteins included in this family.
Probab=69.67 E-value=9.3 Score=25.92 Aligned_cols=26 Identities=15% Similarity=-0.128 Sum_probs=20.2
Q ss_pred HHHhcCCCCceEEEEEcchHHHH-HHhh
Q 044659 41 LANQLNLGHKFDVIGISILTYLF-GLVS 67 (169)
Q Consensus 41 ~~~~~~~~~~~~l~G~S~Gg~ia-~~~~ 67 (169)
.++..++ ..-.+.|.|.|+.++ .++.
T Consensus 19 aL~e~gi-~~d~v~GtSaGAi~aa~~a~ 45 (172)
T cd07198 19 ALRERGP-LIDIIAGTSAGAIVAALLAS 45 (172)
T ss_pred HHHHcCC-CCCEEEEECHHHHHHHHHHc
Confidence 3344466 567899999999999 8877
No 251
>cd07227 Pat_Fungal_NTE1 Fungal patatin-like phospholipase domain containing protein 6. These are fungal Neuropathy Target Esterase (NTE), commonly referred to as NTE1. Patatin-like phospholipase. NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. This family includes NTE1 from fungi.
Probab=69.56 E-value=7.6 Score=28.76 Aligned_cols=28 Identities=11% Similarity=-0.005 Sum_probs=21.3
Q ss_pred HHHHHhcCCCCceEEEEEcchHHHH-HHhh
Q 044659 39 QELANQLNLGHKFDVIGISILTYLF-GLVS 67 (169)
Q Consensus 39 ~~~~~~~~~~~~~~l~G~S~Gg~ia-~~~~ 67 (169)
.+.++..++ ..-.+.|.|+|+.++ .++.
T Consensus 29 L~aLeE~gi-~~d~v~GtSaGAiiga~ya~ 57 (269)
T cd07227 29 LQALEEAGI-PIDAIGGTSIGSFVGGLYAR 57 (269)
T ss_pred HHHHHHcCC-CccEEEEECHHHHHHHHHHc
Confidence 334455666 556799999999999 8887
No 252
>cd07207 Pat_ExoU_VipD_like ExoU and VipD-like proteins; homologus to patatin, cPLA2, and iPLA2. ExoU, a 74-kDa enzyme, is a potent virulence factor of Pseudomonas aeruginosa. One of the pathogenic mechanisms of P. aeruginosa is to induce cytotoxicity by the injection of effector proteins (e.g. ExoU) using the type III secretion (T3S) system. ExoU is homologus to patatin and also has the conserved catalytic residues of mammalian calcium-independent (iPLA2) and cytosolic (cPLA2) PLA2. In vitro, ExoU cytotoxity is blocked by the inhibitor of cytosolic and Ca2-independent phospholipase A2 (cPLA2 and iPLA2) enzymes, suggesting that phospholipase A2 inhibitors may represent a novel mode of treatment for acute P. aeruginosa infections. ExoU requires eukaryotic superoxide dismutase as a cofactor and cleaves phosphatidylcholine and phosphatidylethanolamine in vitro. VipD, a 69-kDa cytosolic protein, belongs to the members of Legionella pneumophila family and is homologus to ExoU from Pseudomona
Probab=69.48 E-value=9 Score=26.39 Aligned_cols=25 Identities=20% Similarity=0.010 Sum_probs=19.4
Q ss_pred HHhcCCCCceEEEEEcchHHHH-HHhh
Q 044659 42 ANQLNLGHKFDVIGISILTYLF-GLVS 67 (169)
Q Consensus 42 ~~~~~~~~~~~l~G~S~Gg~ia-~~~~ 67 (169)
++..++ ..=.++|.|.||.++ .++.
T Consensus 21 L~e~~~-~~d~i~GtSaGai~aa~~a~ 46 (194)
T cd07207 21 LEEAGI-LKKRVAGTSAGAITAALLAL 46 (194)
T ss_pred HHHcCC-CcceEEEECHHHHHHHHHHc
Confidence 344455 557899999999999 7776
No 253
>PF05576 Peptidase_S37: PS-10 peptidase S37; InterPro: IPR008761 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. These group of serine peptidases belong to MEROPS peptidase family S37 (clan SC). The members of this group of secreted peptidases are restricted to bacteria. In Streptomyces lividans the peptidase removes tripeptides from the N terminus of extracellular proteins (tripeptidyl aminopeptidase,Tap) [, ].
Probab=68.73 E-value=4.7 Score=31.76 Aligned_cols=71 Identities=20% Similarity=0.120 Sum_probs=53.0
Q ss_pred CcEEEEeCCCCCCCCCCCCCC----ChhhHHHHHHHHHHhcC--CCCceEEEEEcchHHHH-HHhhccccCCCc----ce
Q 044659 9 GVYVLTFDRTGYGESDPKPKR----PVKIEAFDIQELANQLN--LGHKFDVIGISILTYLF-GLVSNAHHTGIP----AG 77 (169)
Q Consensus 9 g~~v~~~d~~G~G~s~~~~~~----~~~~~~~~~~~~~~~~~--~~~~~~l~G~S~Gg~ia-~~~~~~~~~~~p----~~ 77 (169)
+-+-+.+++|=+|.|.+.+.. ++++.++|.-++.++++ .+.+=+--|.|-||+.+ ..-. .+| ..
T Consensus 88 d~NQl~vEhRfF~~SrP~p~DW~~Lti~QAA~D~Hri~~A~K~iY~~kWISTG~SKGGmTa~y~rr-----FyP~DVD~t 162 (448)
T PF05576_consen 88 DGNQLSVEHRFFGPSRPEPADWSYLTIWQAASDQHRIVQAFKPIYPGKWISTGGSKGGMTAVYYRR-----FYPDDVDGT 162 (448)
T ss_pred ccceEEEEEeeccCCCCCCCCcccccHhHhhHHHHHHHHHHHhhccCCceecCcCCCceeEEEEee-----eCCCCCCee
Confidence 345678889999999887632 38888888888777765 23677788999999999 6666 778 55
Q ss_pred EEEEeec
Q 044659 78 VALVVLV 84 (169)
Q Consensus 78 ~~~~~~~ 84 (169)
+.-++|.
T Consensus 163 VaYVAP~ 169 (448)
T PF05576_consen 163 VAYVAPN 169 (448)
T ss_pred eeeeccc
Confidence 5566664
No 254
>TIGR00128 fabD malonyl CoA-acyl carrier protein transacylase. The seed alignment for this family of proteins contains a single member each from a number of bacterial species but also an additional pair of closely related, uncharacterized proteins from B. subtilis, one of which has a long C-terminal extension.
Probab=68.56 E-value=7.4 Score=28.67 Aligned_cols=27 Identities=15% Similarity=-0.074 Sum_probs=20.4
Q ss_pred HHHHhcC-CCCceEEEEEcchHHHH-HHhh
Q 044659 40 ELANQLN-LGHKFDVIGISILTYLF-GLVS 67 (169)
Q Consensus 40 ~~~~~~~-~~~~~~l~G~S~Gg~ia-~~~~ 67 (169)
+++++.+ + .+-.++|||+|=+.| .++.
T Consensus 74 ~~l~~~g~i-~p~~v~GhS~GE~aAa~~aG 102 (290)
T TIGR00128 74 LKLKEQGGL-KPDFAAGHSLGEYSALVAAG 102 (290)
T ss_pred HHHHHcCCC-CCCEEeecCHHHHHHHHHhC
Confidence 3445666 7 788999999999888 5554
No 255
>cd07210 Pat_hypo_W_succinogenes_WS1459_like Hypothetical patatin similar to WS1459 of Wolinella succinogenes. Patatin-like phospholipase. This family predominantly consists of bacterial patatin glycoproteins. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=66.78 E-value=12 Score=26.79 Aligned_cols=24 Identities=17% Similarity=0.058 Sum_probs=18.8
Q ss_pred HhcCCCCceEEEEEcchHHHH-HHhh
Q 044659 43 NQLNLGHKFDVIGISILTYLF-GLVS 67 (169)
Q Consensus 43 ~~~~~~~~~~l~G~S~Gg~ia-~~~~ 67 (169)
+..++ +.-.++|.|.|+.++ .++.
T Consensus 23 ~e~gi-~~~~i~GtSaGAi~aa~~a~ 47 (221)
T cd07210 23 LEMGL-EPSAISGTSAGALVGGLFAS 47 (221)
T ss_pred HHcCC-CceEEEEeCHHHHHHHHHHc
Confidence 33455 556799999999999 7776
No 256
>cd01714 ETF_beta The electron transfer flavoprotein (ETF) serves as a specific electron acceptor for various mitochondrial dehydrogenases. ETF transfers electrons to the main respiratory chain via ETF-ubiquinone oxidoreductase. ETF is an heterodimer that consists of an alpha and a beta subunit which binds one molecule of FAD per dimer . A similar system also exists in some bacteria. The homologous pair of proteins (FixA/FixB) are essential for nitrogen fixation. The beta subunit protein is distantly related to and forms a heterodimer with the alpha subunit.
Probab=61.06 E-value=42 Score=23.57 Aligned_cols=49 Identities=6% Similarity=0.019 Sum_probs=34.8
Q ss_pred EEEEeCCCCCCCCCCCCCCChhhHHHHHHHHHHhcCCCCceEEEEEcc----hHHHH-HHhh
Q 044659 11 YVLTFDRTGYGESDPKPKRPVKIEAFDIQELANQLNLGHKFDVIGISI----LTYLF-GLVS 67 (169)
Q Consensus 11 ~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~----Gg~ia-~~~~ 67 (169)
+|+..|.+... ..+.+.+++.+.+++++.+. .++|+|+|. |..++ ..+.
T Consensus 79 ~V~~~~~~~~~------~~~~e~~a~al~~~i~~~~p--~lVL~~~t~~~~~grdlaprlAa 132 (202)
T cd01714 79 RAILVSDRAFA------GADTLATAKALAAAIKKIGV--DLILTGKQSIDGDTGQVGPLLAE 132 (202)
T ss_pred EEEEEeccccc------CCChHHHHHHHHHHHHHhCC--CEEEEcCCcccCCcCcHHHHHHH
Confidence 55555554432 23467788888888888764 699999998 78888 6666
No 257
>cd07209 Pat_hypo_Ecoli_Z1214_like Hypothetical patatin similar to Z1214 protein of Escherichia coli. Patatin-like phospholipase similar to Z1214 protein of Escherichia coli. This family predominantly consists of bacterial patatin glycoproteins and some representatives from eukaryotes and archaea. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=60.99 E-value=16 Score=25.87 Aligned_cols=26 Identities=12% Similarity=-0.097 Sum_probs=19.8
Q ss_pred HHHhcCCCCceEEEEEcchHHHH-HHhh
Q 044659 41 LANQLNLGHKFDVIGISILTYLF-GLVS 67 (169)
Q Consensus 41 ~~~~~~~~~~~~l~G~S~Gg~ia-~~~~ 67 (169)
.+...+. ..-.+.|.|.|+.++ .++.
T Consensus 19 aL~e~g~-~~d~i~GtS~GAl~aa~~a~ 45 (215)
T cd07209 19 ALAEAGI-EPDIISGTSIGAINGALIAG 45 (215)
T ss_pred HHHHcCC-CCCEEEEECHHHHHHHHHHc
Confidence 3444555 556899999999999 7777
No 258
>KOG1516 consensus Carboxylesterase and related proteins [General function prediction only]
Probab=60.61 E-value=25 Score=28.61 Aligned_cols=37 Identities=8% Similarity=-0.055 Sum_probs=24.4
Q ss_pred hhhHHHHHHHH---HHhcC-CCCceEEEEEcchHHHH-HHhh
Q 044659 31 VKIEAFDIQEL---ANQLN-LGHKFDVIGISILTYLF-GLVS 67 (169)
Q Consensus 31 ~~~~~~~~~~~---~~~~~-~~~~~~l~G~S~Gg~ia-~~~~ 67 (169)
+.|+..-++.+ +...+ ..++|.++|||.||..+ ..+.
T Consensus 173 l~Dq~~AL~wv~~~I~~FGGdp~~vTl~G~saGa~~v~~l~~ 214 (545)
T KOG1516|consen 173 LFDQLLALRWVKDNIPSFGGDPKNVTLFGHSAGAASVSLLTL 214 (545)
T ss_pred HHHHHHHHHHHHHHHHhcCCCCCeEEEEeechhHHHHHHHhc
Confidence 55555444443 33444 22789999999999999 5554
No 259
>cd07212 Pat_PNPLA9 Patatin-like phospholipase domain containing protein 9. PNPLA9 is a Ca-independent phospholipase that catalyzes the hydrolysis of glycerophospholipids at the sn-2 position. PNPLA9 is also known as PLA2G6 (phospholipase A2 group VI) or iPLA2beta. PLA2G6 is stimulated by ATP and inhibited by bromoenol lactone (BEL). In humans, PNPLA9 in expressed ubiquitously and is involved in signal transduction, cell proliferation, and apoptotic cell death. Mutations in human PLA2G6 leads to infantile neuroaxonal dystrophy (INAD) and idiopathic neurodegeneration with brain iron accumulation (NBIA). This family includes PLA2G6 from Homo sapiens and Rattus norvegicus.
Probab=59.62 E-value=8.5 Score=29.12 Aligned_cols=16 Identities=25% Similarity=0.133 Sum_probs=14.3
Q ss_pred EEEEEcchHHHH-HHhh
Q 044659 52 DVIGISILTYLF-GLVS 67 (169)
Q Consensus 52 ~l~G~S~Gg~ia-~~~~ 67 (169)
.+.|.|+||.+| .++.
T Consensus 35 ~i~GTStGgiIA~~la~ 51 (312)
T cd07212 35 WIAGTSTGGILALALLH 51 (312)
T ss_pred EEEeeChHHHHHHHHHc
Confidence 599999999999 7776
No 260
>cd07205 Pat_PNPLA6_PNPLA7_NTE1_like Patatin-like phospholipase domain containing protein 6, protein 7, and fungal NTE1. Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are included in this family. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologus to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and panc
Probab=59.49 E-value=17 Score=24.60 Aligned_cols=24 Identities=13% Similarity=-0.122 Sum_probs=18.6
Q ss_pred HhcCCCCceEEEEEcchHHHH-HHhh
Q 044659 43 NQLNLGHKFDVIGISILTYLF-GLVS 67 (169)
Q Consensus 43 ~~~~~~~~~~l~G~S~Gg~ia-~~~~ 67 (169)
+..+. ..-.++|.|.|+.++ .++.
T Consensus 23 ~~~~~-~~d~i~GtSaGal~a~~~a~ 47 (175)
T cd07205 23 EEAGI-PIDIVSGTSAGAIVGALYAA 47 (175)
T ss_pred HHcCC-CeeEEEEECHHHHHHHHHHc
Confidence 34455 456899999999999 7776
No 261
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=59.46 E-value=20 Score=28.88 Aligned_cols=44 Identities=20% Similarity=0.237 Sum_probs=32.2
Q ss_pred CCCCCCceEEEEeCCCCcchH--H----HHHHHhCC--------CcEEEEecCCCcee
Q 044659 122 FPNNEESVYLCQGHKDKLVPF--H----RYRAKKLP--------RIRYHEGSAGGHLM 165 (169)
Q Consensus 122 ~~~~~~P~l~~~g~~D~~v~~--~----~~~~~~~~--------~~~~~~~~~~gH~~ 165 (169)
|++-..++++.||..|.++++ . +++.+... -.|+..+||.+|..
T Consensus 349 F~~~GGKLI~~HG~aD~~I~p~~ti~YY~~V~~~~g~~~~~v~dF~RlF~vPGm~HC~ 406 (474)
T PF07519_consen 349 FRARGGKLILYHGWADPLIPPQGTIDYYERVVARMGGALADVDDFYRLFMVPGMGHCG 406 (474)
T ss_pred HHhcCCeEEEEecCCCCccCCCcHHHHHHHHHHhcccccccccceeEEEecCCCcccC
Confidence 444667899999999999999 3 33333332 25788999999974
No 262
>KOG2385 consensus Uncharacterized conserved protein [Function unknown]
Probab=59.37 E-value=20 Score=29.30 Aligned_cols=19 Identities=11% Similarity=0.216 Sum_probs=16.6
Q ss_pred CceEEEEEcchHHHH-HHhh
Q 044659 49 HKFDVIGISILTYLF-GLVS 67 (169)
Q Consensus 49 ~~~~l~G~S~Gg~ia-~~~~ 67 (169)
.+|.|+|+|+|+.+. .++.
T Consensus 447 RPVTLVGFSLGARvIf~CL~ 466 (633)
T KOG2385|consen 447 RPVTLVGFSLGARVIFECLL 466 (633)
T ss_pred CceeEeeeccchHHHHHHHH
Confidence 789999999999999 6655
No 263
>cd07228 Pat_NTE_like_bacteria Bacterial patatin-like phospholipase domain containing protein 6. Bacterial patatin-like phospholipase domain containing protein 6. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. This group includes YCHK and rssA from Escherichia coli as well as Ylbk from Bacillus amyloliquefaciens.
Probab=59.28 E-value=20 Score=24.36 Aligned_cols=24 Identities=13% Similarity=-0.054 Sum_probs=18.8
Q ss_pred HhcCCCCceEEEEEcchHHHH-HHhh
Q 044659 43 NQLNLGHKFDVIGISILTYLF-GLVS 67 (169)
Q Consensus 43 ~~~~~~~~~~l~G~S~Gg~ia-~~~~ 67 (169)
+..+. ..-.++|.|.|+.++ .++.
T Consensus 23 ~e~g~-~~d~i~GtSaGAi~aa~~a~ 47 (175)
T cd07228 23 EEEGI-EIDIIAGSSIGALVGALYAA 47 (175)
T ss_pred HHCCC-CeeEEEEeCHHHHHHHHHHc
Confidence 34455 456899999999999 7777
No 264
>PF14253 AbiH: Bacteriophage abortive infection AbiH
Probab=58.81 E-value=11 Score=27.49 Aligned_cols=13 Identities=15% Similarity=0.130 Sum_probs=11.3
Q ss_pred CceEEEEEcchHH
Q 044659 49 HKFDVIGISILTY 61 (169)
Q Consensus 49 ~~~~l~G~S~Gg~ 61 (169)
..|+++|||+|..
T Consensus 235 ~~I~i~GhSl~~~ 247 (270)
T PF14253_consen 235 DEIIIYGHSLGEV 247 (270)
T ss_pred CEEEEEeCCCchh
Confidence 6799999999964
No 265
>PF11713 Peptidase_C80: Peptidase C80 family; InterPro: IPR020974 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Cysteine peptidases have characteristic molecular topologies, which can be seen not only in their three-dimensional structures, but commonly also in the two-dimensional structures. These are peptidases in which the nucleophile is the sulphydryl group of a cysteine residue. Cysteine proteases are divided into clans (proteins which are evolutionary related), and further sub-divided into families, on the basis of the architecture of their catalytic dyad or triad []. This entry identifies a domain that functions as a cysteine peptidase that belongs to MEROPS peptidase family C80 (RTX self-cleaving toxin, clan CD). This domain is found in bacterial toxins that self-process by a cysteine peptidase mechanism. These include Vibrio cholerae RTX toxin [], and Clostridium difficile toxins A and B []. Some pathogenic bacteria produce unrelated toxins that also require activation and processing, the processing often being autolytic as it is in anthrax lethal factor, tentoxilysin (the tetanus neurotoxin) and bontoxilysin (the botulinum neurotoxin), all of which are metallopeptidases.; PDB: 3GCD_C 3EEB_B 3FZY_A 3PEE_A 3PA8_B 3HO6_A.
Probab=58.71 E-value=5.9 Score=26.77 Aligned_cols=45 Identities=18% Similarity=0.259 Sum_probs=23.9
Q ss_pred CCCCCCCCCC----CCCChhhHHHHH----HHHHHhcCC---CCceEEEEEcchHH
Q 044659 17 RTGYGESDPK----PKRPVKIEAFDI----QELANQLNL---GHKFDVIGISILTY 61 (169)
Q Consensus 17 ~~G~G~s~~~----~~~~~~~~~~~~----~~~~~~~~~---~~~~~l~G~S~Gg~ 61 (169)
+-|||+.... ...+..+.+.-+ ..+.+..+. .++|.|+|+|++..
T Consensus 61 lVGHG~~~~~~~~l~g~~a~~La~~l~~~~~~l~~~~~~~~~P~~IsLvGC~l~~~ 116 (157)
T PF11713_consen 61 LVGHGRDEFNNQTLAGYSADELANKLIKFKQQLKQKYGINISPKKISLVGCSLADN 116 (157)
T ss_dssp EE--EESSTSSSEETTEEHHHHHHHHHHHHHHHHHHHTTT--ESEEEEESSS-S-T
T ss_pred EEEeCCCcCCCceeCCCCHHHHHHHHHHHHHHHHHhccCCCCCCEEEEEEecccCC
Confidence 3488876221 122366666666 444444421 26899999999887
No 266
>PRK02399 hypothetical protein; Provisional
Probab=55.45 E-value=89 Score=24.79 Aligned_cols=67 Identities=24% Similarity=0.287 Sum_probs=40.6
Q ss_pred hhhhhcCcEEEEeCCCCCCCCCCCCC-----------CC-------------hhhHHHHHHHHHHhc----CCCCceEEE
Q 044659 3 DFMDELGVYVLTFDRTGYGESDPKPK-----------RP-------------VKIEAFDIQELANQL----NLGHKFDVI 54 (169)
Q Consensus 3 ~~l~~~g~~v~~~d~~G~G~s~~~~~-----------~~-------------~~~~~~~~~~~~~~~----~~~~~~~l~ 54 (169)
+.+.+.|..|+..|.-..|.....+. .+ ++..++-+..+++.+ .+ .-++-+
T Consensus 24 ~~i~~~g~~v~~iDv~~~~~p~~~~dis~~~Va~~~g~~~~~~~~~~dRg~ai~~M~~ga~~~v~~L~~~g~i-~gvigl 102 (406)
T PRK02399 24 DLIEAAGLEVVTVDVSGLGEPPFEPDISAEEVAEAAGDGIEAVFCGGDRGSAMAAMAEGAAAFVRELYERGDV-AGVIGL 102 (406)
T ss_pred HHHHHCCCceEEEecCCCCCCCCCCCCCHHHHHHHcCCCHHHhhcCccHHHHHHHHHHHHHHHHHHHHhcCCc-cEEEEe
Confidence 45566799999999844442211110 00 222333334444432 24 468899
Q ss_pred EEcchHHHH-HHhhccccCCCc
Q 044659 55 GISILTYLF-GLVSNAHHTGIP 75 (169)
Q Consensus 55 G~S~Gg~ia-~~~~~~~~~~~p 75 (169)
|-|+|..++ .++. ..|
T Consensus 103 GGs~GT~lat~aMr-----~LP 119 (406)
T PRK02399 103 GGSGGTALATPAMR-----ALP 119 (406)
T ss_pred cCcchHHHHHHHHH-----hCC
Confidence 999999999 8888 888
No 267
>COG1092 Predicted SAM-dependent methyltransferases [General function prediction only]
Probab=55.29 E-value=32 Score=27.10 Aligned_cols=39 Identities=8% Similarity=-0.072 Sum_probs=27.2
Q ss_pred CcEEEEeCCCCCCCCCCCCCCChhhHHHHHHHHHHhcCC
Q 044659 9 GVYVLTFDRTGYGESDPKPKRPVKIEAFDIQELANQLNL 47 (169)
Q Consensus 9 g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~ 47 (169)
.|.||..|.|.+++|.........++.+.+...++-+..
T Consensus 290 ~fDlIilDPPsF~r~k~~~~~~~rdy~~l~~~~~~iL~p 328 (393)
T COG1092 290 KFDLIILDPPSFARSKKQEFSAQRDYKDLNDLALRLLAP 328 (393)
T ss_pred cccEEEECCcccccCcccchhHHHHHHHHHHHHHHHcCC
Confidence 499999999999998765533355565555555555544
No 268
>COG0482 TrmU Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain [Translation, ribosomal structure and biogenesis]
Probab=54.92 E-value=31 Score=26.74 Aligned_cols=52 Identities=19% Similarity=0.226 Sum_probs=34.0
Q ss_pred hhhhhcCcEEEEeCCCCCCCCCCCCCCChhhHHHHHHHHHHhcCCCCceEEEEEc
Q 044659 3 DFMDELGVYVLTFDRTGYGESDPKPKRPVKIEAFDIQELANQLNLGHKFDVIGIS 57 (169)
Q Consensus 3 ~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S 57 (169)
.+|.+.||.|+.+-|.-+.. +.......++...|.+.+++++++ ++.++-++
T Consensus 21 ~lLk~QGyeViGl~m~~~~~-~~~~~C~s~~d~~da~~va~~LGI--p~~~vdf~ 72 (356)
T COG0482 21 YLLKEQGYEVIGLFMKNWDE-DGGGGCCSEEDLRDAERVADQLGI--PLYVVDFE 72 (356)
T ss_pred HHHHHcCCeEEEEEEEeecc-CCCCcCCchhHHHHHHHHHHHhCC--ceEEEchH
Confidence 46788899999999987765 222222345556677888888876 45544443
No 269
>TIGR02816 pfaB_fam PfaB family protein. The protein PfaB is part of four gene locus, similar to polyketide biosynthesis systems, responsible for omega-3 polyunsaturated fatty acid biosynthesis in several high pressure and/or cold-adapted bacteria. The fairly permissive trusted cutoff set for this model allows detection of homologs encoded near homologs to other proteins of the locus: PfaA, PfaC, and/or PfaD. The likely role in every case is either polyunsaturated fatty acid or polyketide biosynthesis.
Probab=53.74 E-value=16 Score=29.92 Aligned_cols=27 Identities=11% Similarity=0.079 Sum_probs=20.8
Q ss_pred HHH-HhcCCCCceEEEEEcchHHHH-HHhh
Q 044659 40 ELA-NQLNLGHKFDVIGISILTYLF-GLVS 67 (169)
Q Consensus 40 ~~~-~~~~~~~~~~l~G~S~Gg~ia-~~~~ 67 (169)
+++ +..++ ++-.++|||+|=+.| .++.
T Consensus 256 ~ll~~~~GI-~Pdav~GHSlGE~aAa~aAG 284 (538)
T TIGR02816 256 QLLCDEFAI-KPDFALGYSKGEASMWASLG 284 (538)
T ss_pred HHHHHhcCC-CCCEEeecCHHHHHHHHHhC
Confidence 344 46778 788999999999888 5544
No 270
>COG1598 Predicted nuclease of the RNAse H fold, HicB family [General function prediction only]
Probab=49.04 E-value=44 Score=19.26 Aligned_cols=33 Identities=12% Similarity=0.076 Sum_probs=20.6
Q ss_pred hhcCcEEEEeCCCCCCCCCCCCCCChhhHHHHHHHHH
Q 044659 6 DELGVYVLTFDRTGYGESDPKPKRPVKIEAFDIQELA 42 (169)
Q Consensus 6 ~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~ 42 (169)
...+|.+..||+||+=. ...+.++..+.+++.+
T Consensus 12 ~dg~y~~~~Pdlpgc~s----~G~T~eea~~n~~eai 44 (73)
T COG1598 12 EDGGYVASVPDLPGCHS----QGETLEEALQNAKEAI 44 (73)
T ss_pred CCCCEEEEeCCCCCccc----cCCCHHHHHHHHHHHH
Confidence 46689999999999852 2233444444444433
No 271
>cd07230 Pat_TGL4-5_like Triacylglycerol lipase 4 and 5. TGL4 and TGL5 are triacylglycerol lipases that are involved in triacylglycerol mobilization and degradation; they are found in lipid particles. Tgl4 is a functional ortholog of mammalian adipose TG lipase (ATGL) and is phosphorylated and activated by cyclin-dependent kinase 1 (Cdk1/Cdc28). TGL4 is 30% homologus to TGL3, whereas TGL5 is 26% homologus to TGL3. This family includes TGL4 (STC1) and TGL5 (STC2) from Saccharomyces cerevisiae.
Probab=48.46 E-value=27 Score=27.75 Aligned_cols=25 Identities=20% Similarity=-0.012 Sum_probs=18.5
Q ss_pred HHhcCCCCceEEEEEcchHHHH-HHhh
Q 044659 42 ANQLNLGHKFDVIGISILTYLF-GLVS 67 (169)
Q Consensus 42 ~~~~~~~~~~~l~G~S~Gg~ia-~~~~ 67 (169)
+...++ .+=++.|.|.|+.+| .++.
T Consensus 95 L~E~gl-~p~vIsGTSaGAivAal~as 120 (421)
T cd07230 95 LFEANL-LPRIISGSSAGSIVAAILCT 120 (421)
T ss_pred HHHcCC-CCCEEEEECHHHHHHHHHHc
Confidence 333455 456899999999999 6666
No 272
>KOG1282 consensus Serine carboxypeptidases (lysosomal cathepsin A) [Posttranslational modification, protein turnover, chaperones; Amino acid transport and metabolism]
Probab=47.82 E-value=49 Score=26.64 Aligned_cols=43 Identities=23% Similarity=0.410 Sum_probs=30.8
Q ss_pred CCceEEEEeCCCCcchH--HHHHHHhC-------------------------CCcEEEEecCCCceeeec
Q 044659 126 EESVYLCQGHKDKLVPF--HRYRAKKL-------------------------PRIRYHEGSAGGHLMIHE 168 (169)
Q Consensus 126 ~~P~l~~~g~~D~~v~~--~~~~~~~~-------------------------~~~~~~~~~~~gH~~~~e 168 (169)
..++++..|+.|.++|. .+...+.+ .+..+.++.|+||++++.
T Consensus 363 ~~rvliysGD~D~~~p~~gt~~~i~~L~~~~~~~~~pW~~~~~qvaG~~~~Y~~ltf~tVrGaGH~VP~~ 432 (454)
T KOG1282|consen 363 GYRVLIYSGDHDLVVPFLGTQAWIKSLNLSITDEWRPWYHKGGQVAGYTKTYGGLTFATVRGAGHMVPYD 432 (454)
T ss_pred ceEEEEEeCCcceeCcchhhHHHHHhccCccccCccCCccCCCceeeeEEEecCEEEEEEeCCcccCCCC
Confidence 37899999999999999 33322222 123457888999998765
No 273
>cd07224 Pat_like Patatin-like phospholipase. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of lipid acyl hydrolase, catalysing the cleavage of fatty acids from membrane lipids. Members of this family have been found also in vertebrates.
Probab=46.86 E-value=37 Score=24.42 Aligned_cols=18 Identities=17% Similarity=-0.049 Sum_probs=15.6
Q ss_pred ceEEEEEcchHHHH-HHhh
Q 044659 50 KFDVIGISILTYLF-GLVS 67 (169)
Q Consensus 50 ~~~l~G~S~Gg~ia-~~~~ 67 (169)
.-.+.|.|.|+.++ .++.
T Consensus 30 ~~~i~G~SAGAl~aa~~as 48 (233)
T cd07224 30 TTPLAGASAGSLAAACSAS 48 (233)
T ss_pred CCEEEEEcHHHHHHHHHHc
Confidence 34799999999999 7777
No 274
>cd07208 Pat_hypo_Ecoli_yjju_like Hypothetical patatin similar to yjju protein of Escherichia coli. Patatin-like phospholipase similar to yjju protein of Escherichia coli. This family predominantly consists of bacterial patatin glycoproteins, and some representatives from eukaryotes and archaea. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=46.16 E-value=33 Score=25.06 Aligned_cols=24 Identities=21% Similarity=0.048 Sum_probs=17.9
Q ss_pred HhcCCCC-ceEEEEEcchHHHH-HHhh
Q 044659 43 NQLNLGH-KFDVIGISILTYLF-GLVS 67 (169)
Q Consensus 43 ~~~~~~~-~~~l~G~S~Gg~ia-~~~~ 67 (169)
...++ . .=.++|.|.|+.++ .++.
T Consensus 21 ~e~~~-~~fd~i~GtSaGAi~a~~~~~ 46 (266)
T cd07208 21 LEAGI-RPFDLVIGVSAGALNAASYLS 46 (266)
T ss_pred HHcCC-CCCCEEEEECHHHHhHHHHHh
Confidence 33344 3 34799999999999 7777
No 275
>cd07229 Pat_TGL3_like Triacylglycerol lipase 3. Triacylglycerol lipase 3 (TGL3) are responsible for all the TAG lipase activity of the lipid particle. Triacylglycerol (TAG) lipases are also necessary for the mobilization of TAG stored in lipid particles. TGL3 contains the consensus sequence motif GXSXG, which is found in lipolytic enzymes. This family includes Tgl3p from Saccharomyces cerevisiae.
Probab=45.88 E-value=32 Score=27.08 Aligned_cols=27 Identities=7% Similarity=-0.181 Sum_probs=19.5
Q ss_pred HHHHhcCCCCceEEEEEcchHHHH-HHhh
Q 044659 40 ELANQLNLGHKFDVIGISILTYLF-GLVS 67 (169)
Q Consensus 40 ~~~~~~~~~~~~~l~G~S~Gg~ia-~~~~ 67 (169)
+.+...++ .+=++.|.|.|+.+| .++.
T Consensus 103 kaL~e~gl-~p~~i~GtS~Gaivaa~~a~ 130 (391)
T cd07229 103 KALWLRGL-LPRIITGTATGALIAALVGV 130 (391)
T ss_pred HHHHHcCC-CCceEEEecHHHHHHHHHHc
Confidence 33344555 456799999999999 6666
No 276
>PLN03093 Protein SENSITIVITY TO RED LIGHT REDUCED 1; Provisional
Probab=45.40 E-value=59 Score=24.18 Aligned_cols=63 Identities=17% Similarity=0.116 Sum_probs=33.3
Q ss_pred hhhhhcCcEEEEeCCCCCCCCCCCC----CCChhhHHHH-HHHHHHhcCCCCceEEEEEcchHHHH-HHh
Q 044659 3 DFMDELGVYVLTFDRTGYGESDPKP----KRPVKIEAFD-IQELANQLNLGHKFDVIGISILTYLF-GLV 66 (169)
Q Consensus 3 ~~l~~~g~~v~~~d~~G~G~s~~~~----~~~~~~~~~~-~~~~~~~~~~~~~~~l~G~S~Gg~ia-~~~ 66 (169)
+.|.+.|+.|+..+-.|.-....+. ...-....+. +..-...-.+ .+++++|+|++.+.- ...
T Consensus 148 ~~Le~LG~~Vls~neegkr~a~~pTLFYMPHCp~~LyeNLL~aNWs~e~L-~~ivliGNSFe~y~~~~~~ 216 (273)
T PLN03093 148 RVLESLGCSVLSVNEQGRREATKPTLFFMPHCEAELYNNLLQANWRMERL-NHIALFGNSFEMYEEQVSE 216 (273)
T ss_pred HHHHHcCCeeccccccccccCCCCeEEEeCCCCHHHHHHHHHHhCCHHHc-CCEEEEeCCHHHHHHHHHH
Confidence 3567788898888876654332211 0101111111 1111111124 589999999998876 443
No 277
>KOG1283 consensus Serine carboxypeptidases [Posttranslational modification, protein turnover, chaperones]
Probab=42.96 E-value=79 Score=24.45 Aligned_cols=56 Identities=20% Similarity=0.074 Sum_probs=38.7
Q ss_pred EEEEeCCC-CCCCCC--CCCCC--ChhhHHHHHHHHHHhc-------CCCCceEEEEEcchHHHH-HHhh
Q 044659 11 YVLTFDRT-GYGESD--PKPKR--PVKIEAFDIQELANQL-------NLGHKFDVIGISILTYLF-GLVS 67 (169)
Q Consensus 11 ~v~~~d~~-G~G~s~--~~~~~--~~~~~~~~~~~~~~~~-------~~~~~~~l~G~S~Gg~ia-~~~~ 67 (169)
.++..|-| |-|.|- ....+ +.++.+.|+.++++.+ +. .+++|+.-|.||-++ ..+.
T Consensus 73 dllfvDnPVGaGfSyVdg~~~Y~~~~~qia~Dl~~llk~f~~~h~e~~t-~P~~If~ESYGGKma~k~al 141 (414)
T KOG1283|consen 73 DLLFVDNPVGAGFSYVDGSSAYTTNNKQIALDLVELLKGFFTNHPEFKT-VPLYIFCESYGGKMAAKFAL 141 (414)
T ss_pred cEEEecCCCcCceeeecCcccccccHHHHHHHHHHHHHHHHhcCccccc-cceEEEEhhcccchhhhhhh
Confidence 34455544 666663 23322 3888899999998865 23 579999999999999 5554
No 278
>cd07211 Pat_PNPLA8 Patatin-like phospholipase domain containing protein 8. PNPLA8 is a Ca-independent myocardial phospholipase which maintains mitochondrial integrity. PNPLA8 is also known as iPLA2-gamma. In humans, it is predominantly expressed in heart tissue. iPLA2-gamma can catalyze both phospholipase A1 and A2 reactions (PLA1 and PLA2 respectively). This family includes PNPLA8 (iPLA2-gamma) from Homo sapiens and iPLA2-2 from Mus musculus.
Probab=41.87 E-value=20 Score=26.92 Aligned_cols=16 Identities=25% Similarity=0.042 Sum_probs=13.5
Q ss_pred EEEEEcchHHHH-HHhh
Q 044659 52 DVIGISILTYLF-GLVS 67 (169)
Q Consensus 52 ~l~G~S~Gg~ia-~~~~ 67 (169)
.+.|.|.||.+| .++.
T Consensus 44 li~GTStGgiiA~~la~ 60 (308)
T cd07211 44 YICGVSTGAILAFLLGL 60 (308)
T ss_pred EEEecChhHHHHHHHhc
Confidence 489999999999 6654
No 279
>cd07232 Pat_PLPL Patain-like phospholipase. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants and fungi. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have been found also in vertebrates.
Probab=41.63 E-value=40 Score=26.67 Aligned_cols=25 Identities=16% Similarity=-0.052 Sum_probs=18.6
Q ss_pred HHhcCCCCceEEEEEcchHHHH-HHhh
Q 044659 42 ANQLNLGHKFDVIGISILTYLF-GLVS 67 (169)
Q Consensus 42 ~~~~~~~~~~~l~G~S~Gg~ia-~~~~ 67 (169)
+...++ .+=++.|.|.|+.+| .++.
T Consensus 89 L~e~gl-lp~iI~GtSAGAivaalla~ 114 (407)
T cd07232 89 LLDADL-LPNVISGTSGGSLVAALLCT 114 (407)
T ss_pred HHhCCC-CCCEEEEECHHHHHHHHHHc
Confidence 334455 466799999999999 6666
No 280
>PF01734 Patatin: Patatin-like phospholipase This Prosite family is a subset of the Pfam family; InterPro: IPR002641 This domain is structurally and functionally related to the animal cytosolic phospholipase A2. This domain is found in the patatin glycoproteins from the total soluble protein in potato tubers []. Patatin is a storage protein but it also has the enzymatic activity of lipid acyl hydrolase, catalysing the cleavage of fatty acids from membrane lipids [].; GO: 0006629 lipid metabolic process; PDB: 3TU3_B 4AKX_B 1OXW_A.
Probab=41.47 E-value=26 Score=23.36 Aligned_cols=19 Identities=16% Similarity=-0.223 Sum_probs=15.1
Q ss_pred CceEEEEEcchHHHH-HHhh
Q 044659 49 HKFDVIGISILTYLF-GLVS 67 (169)
Q Consensus 49 ~~~~l~G~S~Gg~ia-~~~~ 67 (169)
..-.+.|.|.||.++ .++.
T Consensus 27 ~~d~i~GtS~Gal~a~~~~~ 46 (204)
T PF01734_consen 27 RFDVISGTSAGALNAALLAL 46 (204)
T ss_dssp T-SEEEEECCHHHHHHHHHT
T ss_pred CccEEEEcChhhhhHHHHHh
Confidence 345799999999999 6666
No 281
>cd07204 Pat_PNPLA_like Patatin-like phospholipase domain containing protein family. Members of this family share a patain domain, initially discovered in potato tubers. PNPLA protein members show non-specific hydrolase activity with a variety of substrates such as triacylglycerol, phospholipids, and retinylesters. It contains the lipase consensus sequence (Gly-X-Ser-X-Gly). Nomenclature of PNPLA family could be misleading as some of the mammalian members of this family show hydrolase, but no phospholipase activity.
Probab=41.13 E-value=51 Score=23.94 Aligned_cols=16 Identities=13% Similarity=0.098 Sum_probs=14.8
Q ss_pred EEEEEcchHHHH-HHhh
Q 044659 52 DVIGISILTYLF-GLVS 67 (169)
Q Consensus 52 ~l~G~S~Gg~ia-~~~~ 67 (169)
.++|.|.|+.++ .++.
T Consensus 34 ~i~GtSAGAl~aa~~a~ 50 (243)
T cd07204 34 RIAGASAGAIVAAVVLC 50 (243)
T ss_pred EEEEEcHHHHHHHHHHh
Confidence 899999999999 7777
No 282
>cd00382 beta_CA Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site. CAs are ubiquitous enzymes involved in fundamental processes like photosynthesis, respiration, pH homeostasis and ion transport. There are three evolutionarily distinct families of CAs (the alpha-, beta-, and gamma-CAs) which show no significant sequence identity or structural similarity. Within the beta-CA family there are four evolutionarily distinct clades (A through D). The beta-CAs are multimeric enzymes (forming dimers,tetramers,hexamers and octamers) which are present in higher plants, algae, fungi, archaea and prokaryotes.
Probab=40.55 E-value=41 Score=21.43 Aligned_cols=30 Identities=10% Similarity=-0.063 Sum_probs=23.8
Q ss_pred hHHHHHHHHHHhcCCCCceEEEEEcchHHHH
Q 044659 33 IEAFDIQELANQLNLGHKFDVIGISILTYLF 63 (169)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~ia 63 (169)
.....++..+..++. +.++++|||--|.+.
T Consensus 44 ~~~~sl~~av~~l~v-~~ivV~gHt~CG~v~ 73 (119)
T cd00382 44 DVLASLEYAVEVLGV-KHIIVCGHTDCGAVK 73 (119)
T ss_pred cHHHHHHHHHHhhCC-CEEEEEccCCCcHHH
Confidence 466677888899998 899999998666544
No 283
>PF05576 Peptidase_S37: PS-10 peptidase S37; InterPro: IPR008761 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. These group of serine peptidases belong to MEROPS peptidase family S37 (clan SC). The members of this group of secreted peptidases are restricted to bacteria. In Streptomyces lividans the peptidase removes tripeptides from the N terminus of extracellular proteins (tripeptidyl aminopeptidase,Tap) [, ].
Probab=39.62 E-value=24 Score=28.02 Aligned_cols=43 Identities=14% Similarity=0.015 Sum_probs=27.8
Q ss_pred CCCceEEEEeCCCCcchHHHHHHHhCCCcEEEEecCCCceeee
Q 044659 125 NEESVYLCQGHKDKLVPFHRYRAKKLPRIRYHEGSAGGHLMIH 167 (169)
Q Consensus 125 ~~~P~l~~~g~~D~~v~~~~~~~~~~~~~~~~~~~~~gH~~~~ 167 (169)
-...+++|+|++|+..--.-.+.+-..+....+.||+.|..-+
T Consensus 350 ~~~rmlFVYG~nDPW~A~~f~l~~g~~ds~v~~~PggnHga~I 392 (448)
T PF05576_consen 350 NGPRMLFVYGENDPWSAEPFRLGKGKRDSYVFTAPGGNHGARI 392 (448)
T ss_pred CCCeEEEEeCCCCCcccCccccCCCCcceEEEEcCCCcccccc
Confidence 3345999999999875441112222335667788999998654
No 284
>COG4553 DepA Poly-beta-hydroxyalkanoate depolymerase [Lipid metabolism]
Probab=39.59 E-value=1.7e+02 Score=22.40 Aligned_cols=42 Identities=12% Similarity=0.229 Sum_probs=30.3
Q ss_pred CCceEEEEeCCCCcchH-----HHHHHHhCCC--cEEEEecCCCceeee
Q 044659 126 EESVYLCQGHKDKLVPF-----HRYRAKKLPR--IRYHEGSAGGHLMIH 167 (169)
Q Consensus 126 ~~P~l~~~g~~D~~v~~-----~~~~~~~~~~--~~~~~~~~~gH~~~~ 167 (169)
++-.+-+-||+|.+--. +..+..++|. .+.+.-|++||+..+
T Consensus 339 ~~aL~tvEGEnDDIsgvGQTkAA~~LC~nIpe~mk~hy~qp~vGHYGVF 387 (415)
T COG4553 339 NVALFTVEGENDDISGVGQTKAAHDLCSNIPEDMKQHYMQPDVGHYGVF 387 (415)
T ss_pred ceeEEEeecccccccccchhHHHHHHHhcChHHHHHHhcCCCCCcccee
Confidence 34466689999998766 5666777774 456677899998654
No 285
>cd07217 Pat17_PNPLA8_PNPLA9_like4 Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=38.70 E-value=29 Score=26.77 Aligned_cols=16 Identities=19% Similarity=-0.045 Sum_probs=14.0
Q ss_pred EEEEEcchHHHH-HHhh
Q 044659 52 DVIGISILTYLF-GLVS 67 (169)
Q Consensus 52 ~l~G~S~Gg~ia-~~~~ 67 (169)
.+.|.|.||.+| .++.
T Consensus 44 lIaGTStGgIIAa~la~ 60 (344)
T cd07217 44 FVGGTSTGSIIAACIAL 60 (344)
T ss_pred EEEEecHHHHHHHHHHc
Confidence 699999999999 7665
No 286
>PF03054 tRNA_Me_trans: tRNA methyl transferase; InterPro: IPR004506 tRNA-specific 2-thiouridylase catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34.; GO: 0016740 transferase activity, 0008033 tRNA processing, 0005737 cytoplasm; PDB: 2DET_A 2DER_A 2DEU_A 2HMA_A.
Probab=38.64 E-value=29 Score=26.90 Aligned_cols=51 Identities=18% Similarity=0.244 Sum_probs=30.0
Q ss_pred hhhhhcCcEEEEeCCCCCCCCCCCC-CCChhhHHHHHHHHHHhcCCCCceEEEE
Q 044659 3 DFMDELGVYVLTFDRTGYGESDPKP-KRPVKIEAFDIQELANQLNLGHKFDVIG 55 (169)
Q Consensus 3 ~~l~~~g~~v~~~d~~G~G~s~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~G 55 (169)
-+|.+.||.|+.+-|+-....+... .....+..+|+..++++|++ ++.++=
T Consensus 18 ~LLk~~G~~V~Gv~m~~~~~~~~~~~~c~~~~d~~~a~~va~~LgI--p~~v~d 69 (356)
T PF03054_consen 18 ALLKEQGYDVIGVTMRNWDEEDESGKSCCSEEDIEDARRVAEKLGI--PHYVVD 69 (356)
T ss_dssp HHHHHCT-EEEEEEEE-SS-SSSHH-HHHHHHHHHHHHHHHHHHT----EEEEE
T ss_pred HHHHhhcccceEEEEEEeccccccCCCCCchhhHHHHHHHHHhcCC--CEEEEC
Confidence 4578899999999998665433211 11245566788888888876 344433
No 287
>cd07218 Pat_iPLA2 Calcium-independent phospholipase A2; Classified as Group IVA-1 PLA2. Calcium-independent phospholipase A2; otherwise known as Group IVA-1 PLA2. It contains the lipase consensus sequence (Gly-X-Ser-X-Gly);mutagenesis experiments confirm the role of this serine as a nucleophile. Some members of this group show triacylglycerol lipase activity (EC 3:1:1:3). Members include iPLA-1, iPLA-2, and iPLA-3 from Aedes aegypti and show acylglycerol transacylase/lipase activity. Also includes putative iPLA2-eta from Pediculus humanus corporis which shows patatin-like phospholipase activity.
Probab=37.50 E-value=57 Score=23.76 Aligned_cols=16 Identities=19% Similarity=0.119 Sum_probs=14.3
Q ss_pred EEEEEcchHHHH-HHhh
Q 044659 52 DVIGISILTYLF-GLVS 67 (169)
Q Consensus 52 ~l~G~S~Gg~ia-~~~~ 67 (169)
.+.|.|.|+.++ .++.
T Consensus 33 ~i~GtSAGAl~aa~~a~ 49 (245)
T cd07218 33 KISGASAGALAACCLLC 49 (245)
T ss_pred eEEEEcHHHHHHHHHHh
Confidence 399999999999 7777
No 288
>cd07231 Pat_SDP1-like Sugar-Dependent 1 like lipase. Sugar-Dependent 1 (SDP1) lipase has a patatin-like acyl-hydrolase domain that initiates the breakdown of storage oil in germinating Arabidopsis seeds. This acyl-hydrolase domain is homologus to yeast triacylglycerol lipase 3 and human adipose triglyceride lipase. This family includes SDP1 from Arabidopsis thaliana.
Probab=37.39 E-value=55 Score=25.04 Aligned_cols=25 Identities=12% Similarity=0.032 Sum_probs=18.4
Q ss_pred HHhcCCCCceEEEEEcchHHHH-HHhh
Q 044659 42 ANQLNLGHKFDVIGISILTYLF-GLVS 67 (169)
Q Consensus 42 ~~~~~~~~~~~l~G~S~Gg~ia-~~~~ 67 (169)
+...++ .+-++.|.|.|+.+| .++.
T Consensus 90 L~e~gl-~p~~i~GsSaGAivaa~~~~ 115 (323)
T cd07231 90 LVEHQL-LPRVIAGSSVGSIVCAIIAT 115 (323)
T ss_pred HHHcCC-CCCEEEEECHHHHHHHHHHc
Confidence 334455 456799999999999 6665
No 289
>PF03283 PAE: Pectinacetylesterase
Probab=35.48 E-value=64 Score=25.08 Aligned_cols=52 Identities=13% Similarity=0.021 Sum_probs=29.4
Q ss_pred hhHHHHHHHHHHh-cCCCCceEEEEEcchHHHH-HHhhccccCCCc--ceEEEEeec
Q 044659 32 KIEAFDIQELANQ-LNLGHKFDVIGISILTYLF-GLVSNAHHTGIP--AGVALVVLV 84 (169)
Q Consensus 32 ~~~~~~~~~~~~~-~~~~~~~~l~G~S~Gg~ia-~~~~~~~~~~~p--~~~~~~~~~ 84 (169)
..+...+++++.. +...++++|.|.|.||.=+ ..+...+ +.+| ..+.+++..
T Consensus 138 ~i~~avl~~l~~~gl~~a~~vlltG~SAGG~g~~~~~d~~~-~~lp~~~~v~~~~Ds 193 (361)
T PF03283_consen 138 RILRAVLDDLLSNGLPNAKQVLLTGCSAGGLGAILHADYVR-DRLPSSVKVKCLSDS 193 (361)
T ss_pred HHHHHHHHHHHHhcCcccceEEEeccChHHHHHHHHHHHHH-HHhccCceEEEeccc
Confidence 3344444555555 4323789999999999988 4333111 1445 445555443
No 290
>TIGR03607 patatin-related protein. This bacterial protein family contains an N-terminal patatin domain, where patatins are plant storage proteins capable of phospholipase activity (see pfam01734). Regions of strong sequence conservation are separated by regions of significant sequence and length variability. Members of the family are distributed sporadically among bacteria. The function is unknown.
Probab=35.44 E-value=82 Score=27.15 Aligned_cols=19 Identities=16% Similarity=-0.284 Sum_probs=15.2
Q ss_pred CceEEEEEcchHHHH-HHhh
Q 044659 49 HKFDVIGISILTYLF-GLVS 67 (169)
Q Consensus 49 ~~~~l~G~S~Gg~ia-~~~~ 67 (169)
.--++.|.|+||.++ .++.
T Consensus 66 ~~d~iaGTSAGAInaa~lA~ 85 (739)
T TIGR03607 66 RVDVISGTSAGGINGVLLAY 85 (739)
T ss_pred CCceEEeeCHHHHHHHHHHc
Confidence 345799999999999 6664
No 291
>TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic. This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity.
Probab=35.38 E-value=1.9e+02 Score=22.82 Aligned_cols=52 Identities=8% Similarity=-0.043 Sum_probs=29.2
Q ss_pred hhhhcCcEEEEeCCCC--CCCCCCCCCCChhhHHHHHHHHHHh---cCCCCceEEEEE
Q 044659 4 FMDELGVYVLTFDRTG--YGESDPKPKRPVKIEAFDIQELANQ---LNLGHKFDVIGI 56 (169)
Q Consensus 4 ~l~~~g~~v~~~d~~G--~G~s~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~l~G~ 56 (169)
.|.+.|+.++-|..-- +|..........++..+.+.+.+.. +.- +++.+.|-
T Consensus 137 ~L~~~G~~vv~P~~g~~ac~~~g~g~~~~~~~i~~~v~~~~~~~~~~~~-~~vlit~g 193 (390)
T TIGR00521 137 RLKDDGYIFIEPDSGLLACGDEGKGRLAEPETIVKAAEREFSPKEDLEG-KRVLITAG 193 (390)
T ss_pred HHHHCCcEEECCCCcccccccccCCCCCCHHHHHHHHHHHHhhccccCC-ceEEEecC
Confidence 4566788876665322 2444333334466776666666544 322 56666666
No 292
>COG0331 FabD (acyl-carrier-protein) S-malonyltransferase [Lipid metabolism]
Probab=35.30 E-value=43 Score=25.43 Aligned_cols=19 Identities=21% Similarity=0.032 Sum_probs=16.0
Q ss_pred CceEEEEEcchHHHH-HHhh
Q 044659 49 HKFDVIGISILTYLF-GLVS 67 (169)
Q Consensus 49 ~~~~l~G~S~Gg~ia-~~~~ 67 (169)
++..+.|||+|=+.| .++.
T Consensus 85 ~p~~~aGHSlGEysAl~~ag 104 (310)
T COG0331 85 KPDFVAGHSLGEYSALAAAG 104 (310)
T ss_pred CCceeecccHhHHHHHHHcc
Confidence 678999999999999 5554
No 293
>PF09949 DUF2183: Uncharacterized conserved protein (DUF2183); InterPro: IPR019236 This domain, found in various bacterial and fungal proteins, has no known function.
Probab=35.06 E-value=1.1e+02 Score=18.97 Aligned_cols=67 Identities=19% Similarity=0.152 Sum_probs=40.0
Q ss_pred hhhhhcCcEEEEeCCCCCCCCCCCCCCC--hhhHHHHHHHHHHhcCCCCceEEEEEcchHHHH---HHhhccccCCCc
Q 044659 3 DFMDELGVYVLTFDRTGYGESDPKPKRP--VKIEAFDIQELANQLNLGHKFDVIGISILTYLF---GLVSNAHHTGIP 75 (169)
Q Consensus 3 ~~l~~~g~~v~~~d~~G~G~s~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~ia---~~~~~~~~~~~p 75 (169)
+.+.+.||-.=.+.++..|.+....... .+.=...++++++.... .+++++|=|--.=.- .++. .+|
T Consensus 18 ~Fl~~~~~P~G~~~Lr~~~~~~~~~~~~~~~~~K~~~i~~i~~~fP~-~kfiLIGDsgq~DpeiY~~ia~-----~~P 89 (100)
T PF09949_consen 18 DFLRRNGFPAGPLLLRDYGPSLSGLFKSGAEEHKRDNIERILRDFPE-RKFILIGDSGQHDPEIYAEIAR-----RFP 89 (100)
T ss_pred HHHHhcCCCCCceEcccCCccccccccCCchhHHHHHHHHHHHHCCC-CcEEEEeeCCCcCHHHHHHHHH-----HCC
Confidence 3455556655566666666553222111 22344567788888876 799999998554433 5555 667
No 294
>cd03379 beta_CA_cladeD Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site. CAs are ubiquitous enzymes involved in fundamental processes like photosynthesis, respiration, pH homeostasis and ion transport. There are three evolutionarily distinct families of CAs (the alpha-, beta-, and gamma-CAs) which show no significant sequence identity or structural similarity. Within the beta-CA family there are four evolutionarily distinct clades (A through D). The beta-CAs are multimeric enzymes (forming dimers,tetramers,hexamers and octamers) which are present in higher plants, algae, fungi, archaea and prokaryotes.
Probab=35.00 E-value=60 Score=21.39 Aligned_cols=30 Identities=13% Similarity=-0.111 Sum_probs=22.7
Q ss_pred hHHHHHHHHHHhcCCCCceEEEEEcchHHHH
Q 044659 33 IEAFDIQELANQLNLGHKFDVIGISILTYLF 63 (169)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~ia 63 (169)
+....++..+..++. +.++++||+-=|.+.
T Consensus 41 ~~~~sl~~av~~l~~-~~IiV~gHt~Cg~~~ 70 (142)
T cd03379 41 DAIRSLVVSVYLLGT-REIIVIHHTDCGMLT 70 (142)
T ss_pred hHHHHHHHHHHHhCC-CEEEEEeecCCcceE
Confidence 455667778888988 899999998544443
No 295
>cd07213 Pat17_PNPLA8_PNPLA9_like1 Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=34.89 E-value=31 Score=25.65 Aligned_cols=16 Identities=25% Similarity=0.187 Sum_probs=14.3
Q ss_pred EEEEEcchHHHH-HHhh
Q 044659 52 DVIGISILTYLF-GLVS 67 (169)
Q Consensus 52 ~l~G~S~Gg~ia-~~~~ 67 (169)
.+.|.|.||.+| .++.
T Consensus 37 ~i~GTSaGaiia~~la~ 53 (288)
T cd07213 37 LFAGTSAGSLIALGLAL 53 (288)
T ss_pred EEEEeCHHHHHHHHHHc
Confidence 699999999999 7766
No 296
>cd07025 Peptidase_S66 LD-Carboxypeptidase, a serine protease, includes microcin C7 self immunity protein. LD-carboxypeptidase (Muramoyltetrapeptide carboxypeptidase; EC 3.4.17.13; Merops family S66; initially described as Carboxypeptidase II) family also includes the microcin c7 self-immunity protein (MccF) as well as uncharacterized proteins including hypothetical proteins. LD-carboxypeptidase hydrolyzes the amide bond that links the dibasic amino acids to C-terminal D-amino acids. The physiological substrates of LD-carboxypeptidase are tetrapeptide fragments (such as UDP-MurNAc-tetrapeptides) that are produced when bacterial cell walls are degraded; they contain an L-configured residue (L-lysine or meso-diaminopimelic acid residue) as the penultimate residue and D-alanine as the ultimate residue. A possible role of LD-carboxypeptidase is in peptidoglycan recycling whereby the resulting tripeptide (precursor for murein synthesis) can be reconverted into peptidoglycan by attachment o
Probab=34.39 E-value=1.3e+02 Score=22.34 Aligned_cols=40 Identities=13% Similarity=0.027 Sum_probs=26.0
Q ss_pred hhhhhcCcEEEEeCCCCCCCCCCCCCCChhhHHHHHHHHHHh
Q 044659 3 DFMDELGVYVLTFDRTGYGESDPKPKRPVKIEAFDIQELANQ 44 (169)
Q Consensus 3 ~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~ 44 (169)
+.|++.||.|+..+.-..... ....+.++.++|+.++++.
T Consensus 21 ~~L~~~G~~v~~~~~~~~~~~--~~a~s~~~Ra~dL~~a~~d 60 (282)
T cd07025 21 ARLESLGLEVVVGPHVLARDG--YLAGTDEERAADLNAAFAD 60 (282)
T ss_pred HHHHhCCCEEEeccchhhhcC--ccCCCHHHHHHHHHHHhhC
Confidence 457778999998887654322 2334477777777766643
No 297
>cd07206 Pat_TGL3-4-5_SDP1 Triacylglycerol lipase 3, 4, and 5 and Sugar-Dependent 1 lipase. Triacylglycerol lipases are involved in triacylglycerol mobilization and degradation; they are found in lipid particles. TGL4 is 30% homologus to TGL3, whereas TGL5 is 26% homologus to TGL3. Sugar-Dependent 1 (SDP1) lipase has a patatin-like acyl-hydrolase domain that initiates the breakdown of storage oil in germinating Arabidopsis seeds. This family includes subfamilies of proteins: TGL3, TGL4, TGL5, and SDP1.
Probab=33.70 E-value=69 Score=24.25 Aligned_cols=22 Identities=18% Similarity=-0.053 Sum_probs=17.0
Q ss_pred cCCCCceEEEEEcchHHHH-HHhh
Q 044659 45 LNLGHKFDVIGISILTYLF-GLVS 67 (169)
Q Consensus 45 ~~~~~~~~l~G~S~Gg~ia-~~~~ 67 (169)
.++ .+-.+.|.|.|+.+| .++.
T Consensus 94 ~~l-~~~~i~GtSaGAi~aa~~~~ 116 (298)
T cd07206 94 QDL-LPRVISGSSAGAIVAALLGT 116 (298)
T ss_pred cCC-CCCEEEEEcHHHHHHHHHHc
Confidence 445 455799999999999 6665
No 298
>KOG4389 consensus Acetylcholinesterase/Butyrylcholinesterase [Signal transduction mechanisms]
Probab=33.57 E-value=36 Score=27.77 Aligned_cols=59 Identities=10% Similarity=-0.031 Sum_probs=33.2
Q ss_pred CcEEEEeCCCCCCCCCCCCCCC-hhhHHHHHHHH---HHhcCC-CCceEEEEEcchHHHH-HHhh
Q 044659 9 GVYVLTFDRTGYGESDPKPKRP-VKIEAFDIQEL---ANQLNL-GHKFDVIGISILTYLF-GLVS 67 (169)
Q Consensus 9 g~~v~~~d~~G~G~s~~~~~~~-~~~~~~~~~~~---~~~~~~-~~~~~l~G~S~Gg~ia-~~~~ 67 (169)
+|||=++-..-.+.+++.+.+- +-|+.-.+..+ +.+.+- .+++.|+|-|.|+... +-+.
T Consensus 173 NYRvG~FGFL~l~~~~eaPGNmGl~DQqLAl~WV~~Ni~aFGGnp~~vTLFGESAGaASv~aHLl 237 (601)
T KOG4389|consen 173 NYRVGAFGFLYLPGHPEAPGNMGLLDQQLALQWVQENIAAFGGNPSRVTLFGESAGAASVVAHLL 237 (601)
T ss_pred eeeeccceEEecCCCCCCCCccchHHHHHHHHHHHHhHHHhCCCcceEEEeccccchhhhhheec
Confidence 4555555444444444444432 44444444333 344542 2789999999999888 5444
No 299
>PF08197 TT_ORF2a: pORF2a truncated protein; InterPro: IPR013267 Most isolated ORF2 of TT virus (TTV) encode a 49 amino acid protein (pORF2a) because of an in-frame stop codon. ORF2s isolated from G1 TTV encode a 202 amino acid protein (pORF2ab) [].
Probab=33.55 E-value=25 Score=18.12 Aligned_cols=13 Identities=31% Similarity=0.575 Sum_probs=10.0
Q ss_pred EEEEeCCCCCCCC
Q 044659 11 YVLTFDRTGYGES 23 (169)
Q Consensus 11 ~v~~~d~~G~G~s 23 (169)
.+-+-|+||||..
T Consensus 36 airardwpg~gq~ 48 (49)
T PF08197_consen 36 AIRARDWPGYGQG 48 (49)
T ss_pred ceEeccCCCcCCC
Confidence 4567899999963
No 300
>cd07221 Pat_PNPLA3 Patatin-like phospholipase domain containing protein 3. PNPLA3 is a triacylglycerol lipase that mediates triacylglycerol hydrolysis in adipocytes and is an indicator of the nutritional state. PNPLA3 is also known as adiponutrin (ADPN) or iPLA2-epsilon. Human adiponutrins are bound to the cell membrane of adipocytes and show transacylase, TG hydrolase, and PLA2 activity. This family includes patatin-like proteins: ADPN (adiponutrin) from mammals, PNPLA3 (Patatin-like phospholipase domain-containing protein 3), and iPLA2-epsilon (Calcium-independent phospholipase A2) from Homo sapiens.
Probab=33.49 E-value=76 Score=23.27 Aligned_cols=18 Identities=17% Similarity=0.004 Sum_probs=15.3
Q ss_pred ceEEEEEcchHHHH-HHhh
Q 044659 50 KFDVIGISILTYLF-GLVS 67 (169)
Q Consensus 50 ~~~l~G~S~Gg~ia-~~~~ 67 (169)
.-.++|.|.|+.++ .++.
T Consensus 33 ~~~i~GtSAGAl~aa~~as 51 (252)
T cd07221 33 ARMFFGASAGALHCVTFLS 51 (252)
T ss_pred CCEEEEEcHHHHHHHHHHh
Confidence 34699999999999 7777
No 301
>cd06583 PGRP Peptidoglycan recognition proteins (PGRPs) are pattern recognition receptors that bind, and in certain cases, hydrolyze peptidoglycans (PGNs) of bacterial cell walls. PGRPs have been divided into three classes: short PGRPs (PGRP-S), that are small (20 kDa) extracellular proteins; intermediate PGRPs (PGRP-I) that are 40-45 kDa and are predicted to be transmembrane proteins; and long PGRPs (PGRP-L), up to 90 kDa, which may be either intracellular or transmembrane. Several structures of PGRPs are known in insects and mammals, some bound with substrates like Muramyl Tripeptide (MTP) or Tracheal Cytotoxin (TCT). The substrate binding site is conserved in PGRP-LCx, PGRP-LE, and PGRP-Ialpha proteins. This family includes Zn-dependent N-Acetylmuramoyl-L-alanine Amidase, EC:3.5.1.28. This enzyme cleaves the amide bond between N-acetylmuramoyl and L-amino acids, preferentially D-lactyl-L-Ala, in bacterial cell walls. The structure for the bacteriophage T7 lysozyme shows that two of
Probab=33.00 E-value=73 Score=19.90 Aligned_cols=48 Identities=10% Similarity=0.194 Sum_probs=29.8
Q ss_pred EEeCCCCCCCCCCCCCCChhhHHHHHHHHHHhcCCCCceEEEEEcchH
Q 044659 13 LTFDRTGYGESDPKPKRPVKIEAFDIQELANQLNLGHKFDVIGISILT 60 (169)
Q Consensus 13 ~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg 60 (169)
+.+.+-|...........++..++.+.+++++.++..+-.|+||....
T Consensus 70 igIe~~g~~~~~~~~~~q~~~~~~L~~~l~~~~~i~~~~~i~~H~~~~ 117 (126)
T cd06583 70 IGIELIGNFDGGPPTAAQLEALAELLAYLVKRYGIPPDYRIVGHRDVS 117 (126)
T ss_pred EEEEEEeCCCCCCCCHHHHHHHHHHHHHHHHhCCCCCCCEEEecccCC
Confidence 444444444332222223777777888888888872268899998643
No 302
>cd00883 beta_CA_cladeA Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site. CAs are ubiquitous enzymes involved in fundamental processes like photosynthesis, respiration, pH homeostasis and ion transport. There are three evolutionarily distinct families of CAs (the alpha-, beta-, and gamma-CAs) which show no significant sequence identity or structural similarity. Within the beta-CA family there are four evolutionarily distinct clades (A through D). The beta-CAs are multimeric enzymes (forming dimers,tetramers,hexamers and octamers) which are present in higher plants, algae, fungi, archaea and prokaryotes.
Probab=31.62 E-value=62 Score=22.39 Aligned_cols=32 Identities=16% Similarity=-0.058 Sum_probs=25.5
Q ss_pred HHHHHHHHHHhcCCCCceEEEEEcchHHHH-HHh
Q 044659 34 EAFDIQELANQLNLGHKFDVIGISILTYLF-GLV 66 (169)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~l~G~S~Gg~ia-~~~ 66 (169)
...-++..+..++. +.|+++|||-=|.+. ...
T Consensus 67 ~~asleyAv~~L~v-~~IvV~GHs~CGav~a~~~ 99 (182)
T cd00883 67 CLSVLQYAVDVLKV-KHIIVCGHYGCGGVKAALT 99 (182)
T ss_pred hhhhHHHHHHhcCC-CEEEEecCCCchHHHHHHc
Confidence 45567888889998 899999999888777 443
No 303
>cd07216 Pat17_PNPLA8_PNPLA9_like3 Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=31.43 E-value=31 Score=25.94 Aligned_cols=15 Identities=20% Similarity=-0.122 Sum_probs=13.1
Q ss_pred EEEEEcchHHHH-HHh
Q 044659 52 DVIGISILTYLF-GLV 66 (169)
Q Consensus 52 ~l~G~S~Gg~ia-~~~ 66 (169)
.+.|.|.||.+| .++
T Consensus 45 li~GTStGgiiA~~l~ 60 (309)
T cd07216 45 LIGGTSTGGLIAIMLG 60 (309)
T ss_pred eeeeccHHHHHHHHhc
Confidence 689999999999 655
No 304
>cd07220 Pat_PNPLA2 Patatin-like phospholipase domain containing protein 2. PNPLA2 plays a key role in hydrolysis of stored triacylglecerols and is also known as adipose triglyceride lipase (ATGL). Members of this family share a patain domain, initially discovered in potato tubers. ATGL is expressed in white and brown adipose tissue in high mRNA levels. Mutations in PNPLA2 encoding adipose triglyceride lipase (ATGL) leads to neutral lipid storage disease (NLSD) which is characterized by the accumulation of triglycerides in multiple tissues. ATGL mutations are also commonly associated with severe forms of skeletal- and cardio-myopathy. This family includes patatin-like proteins: TTS-2.2 (transport-secretion protein 2.2), PNPLA2 (Patatin-like phospholipase domain-containing protein 2), and iPLA2-zeta (Calcium-independent phospholipase A2) from Homo sapiens.
Probab=30.81 E-value=90 Score=22.84 Aligned_cols=17 Identities=24% Similarity=0.176 Sum_probs=14.9
Q ss_pred eEEEEEcchHHHH-HHhh
Q 044659 51 FDVIGISILTYLF-GLVS 67 (169)
Q Consensus 51 ~~l~G~S~Gg~ia-~~~~ 67 (169)
-.+.|.|.|+.++ .++.
T Consensus 38 ~~i~G~SAGAl~aa~~a~ 55 (249)
T cd07220 38 RKIYGASAGALTATALVT 55 (249)
T ss_pred CeEEEEcHHHHHHHHHHc
Confidence 5689999999999 7777
No 305
>PF10081 Abhydrolase_9: Alpha/beta-hydrolase family; InterPro: IPR012037 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=30.79 E-value=1e+02 Score=23.20 Aligned_cols=36 Identities=17% Similarity=-0.006 Sum_probs=22.4
Q ss_pred CceEEEEEcchHHHH-HHhhccccCCCc-ceEEEEeec
Q 044659 49 HKFDVIGISILTYLF-GLVSNAHHTGIP-AGVALVVLV 84 (169)
Q Consensus 49 ~~~~l~G~S~Gg~ia-~~~~~~~~~~~p-~~~~~~~~~ 84 (169)
.|+++.|-|+|++-+ .+......-.-+ .+.+...|.
T Consensus 109 PkL~l~GeSLGa~g~~~af~~~~~~~~~vdGalw~GpP 146 (289)
T PF10081_consen 109 PKLYLYGESLGAYGGEAAFDGLDDLRDRVDGALWVGPP 146 (289)
T ss_pred CeEEEeccCccccchhhhhccHHHhhhhcceEEEeCCC
Confidence 469999999999988 655511111111 666666553
No 306
>cd07222 Pat_PNPLA4 Patatin-like phospholipase domain containing protein 4. PNPLA4, also known as GS2 (gene sequence-2), shows both lipase and transacylation activities. GS2 lipase is expressed in various tissues, predominantly in muscle and adipocytes tissue. It is also expressed in keratinocytes and shows retinyl ester hydrolase, acylglycerol, TG hydrolase, and PLA2 activity. This family includes patatin-like proteins: GS2 from mammals, PNPLA4 (Patatin-like phospholipase domain-containing protein 4), and iPLA2-eta (Calcium-independent phospholipase A2) from Homo sapiens.
Probab=30.56 E-value=77 Score=23.03 Aligned_cols=16 Identities=19% Similarity=0.144 Sum_probs=14.1
Q ss_pred EEEEEcchHHHH-HHhh
Q 044659 52 DVIGISILTYLF-GLVS 67 (169)
Q Consensus 52 ~l~G~S~Gg~ia-~~~~ 67 (169)
.+.|.|+|+.++ .++.
T Consensus 34 ~i~GtSaGAl~aa~~a~ 50 (246)
T cd07222 34 RFAGASAGSLVAAVLLT 50 (246)
T ss_pred EEEEECHHHHHHHHHhc
Confidence 799999999999 7765
No 307
>cd07062 Peptidase_S66_mccF_like Microcin C7 self-immunity protein determines resistance to exogenous microcin C7. Microcin C7 self-immunity protein (mccF): MccF, a homolog of the LD-carboxypeptidase family, mediates resistance against exogenously added microcin C7 (MccC7), a ribosomally-encoded peptide antibiotic that contains a phosphoramidate linkage to adenosine monophosphate at its C-terminus. The plasmid-encoded mccF gene is transcribed in the opposite direction to the other five genes (mccA-E) and is required for the full expression of immunity but not for production. The catalytic triad residues (Ser, His, Glu) of LD-carboxypeptidase are also conserved in MccF, strongly suggesting that MccF shares the hydrolytic activity with LD-carboxypeptidases. Substrates of MccF have not been deduced, but could likely be microcin C7 precursors. The possible role of MccF is to defend producer cells against exogenous microcin from re-entering after having been exported. It is suggested that M
Probab=30.45 E-value=1.7e+02 Score=22.11 Aligned_cols=39 Identities=13% Similarity=0.052 Sum_probs=25.0
Q ss_pred hhhhhcCcEEEEeCCCCCCCCCCCCCCChhhHHHHHHHHHH
Q 044659 3 DFMDELGVYVLTFDRTGYGESDPKPKRPVKIEAFDIQELAN 43 (169)
Q Consensus 3 ~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~ 43 (169)
+.|++.||.|+..+.-.-.. .....+.++.++|+.+.+.
T Consensus 25 ~~L~~~G~~v~~~~~~~~~~--~~~ag~~~~Ra~dL~~a~~ 63 (308)
T cd07062 25 KRLENLGFEVVEGPNALKGD--KYLSASPEERAEELMAAFA 63 (308)
T ss_pred HHHHhCCCEEEEeccccccc--ccccCCHHHHHHHHHHHhc
Confidence 45778899999888764322 1233446777777776653
No 308
>COG3887 Predicted signaling protein consisting of a modified GGDEF domain and a DHH domain [Signal transduction mechanisms]
Probab=30.06 E-value=1.1e+02 Score=25.61 Aligned_cols=37 Identities=11% Similarity=0.125 Sum_probs=22.2
Q ss_pred hhhHHHHHHHHHHhc-CCCCceEEEEE------cchHHHH--HHhh
Q 044659 31 VKIEAFDIQELANQL-NLGHKFDVIGI------SILTYLF--GLVS 67 (169)
Q Consensus 31 ~~~~~~~~~~~~~~~-~~~~~~~l~G~------S~Gg~ia--~~~~ 67 (169)
....++.+-..++.+ .-.++++++|| +.|+.++ ..|.
T Consensus 319 TRvRaRvis~al~d~i~e~d~VfImGHk~pDmDalGsAig~~~~A~ 364 (655)
T COG3887 319 TRVRARVISTALSDIIKESDNVFIMGHKFPDMDALGSAIGMQKFAS 364 (655)
T ss_pred HHHHHHHHHHHHHHHHhhcCcEEEEccCCCChHHHHHHHHHHHHHH
Confidence 333444444433332 21278999999 5899999 4444
No 309
>COG4874 Uncharacterized protein conserved in bacteria containing a pentein-type domain [Function unknown]
Probab=29.78 E-value=53 Score=24.08 Aligned_cols=24 Identities=42% Similarity=0.624 Sum_probs=20.6
Q ss_pred ChhhhhhcCcEEEEeCCCCCCCCC
Q 044659 1 MQDFMDELGVYVLTFDRTGYGESD 24 (169)
Q Consensus 1 ~~~~l~~~g~~v~~~d~~G~G~s~ 24 (169)
|.+.|.+.|.+|..+|..|-|.+.
T Consensus 62 mve~L~~~GvdV~ifddtg~~~TP 85 (318)
T COG4874 62 MVEGLRQAGVDVVIFDDTGQGETP 85 (318)
T ss_pred HHHHHHhcCceEEEeecCCCCCCC
Confidence 356788999999999999999874
No 310
>PF03681 UPF0150: Uncharacterised protein family (UPF0150); InterPro: IPR005357 This family of small proteins is uncharacterised. In Q9A3L8 from SWISSPROT this domain is found next to a DNA binding helix-turn-helix domain IPR002145 from INTERPRO, which suggests that this is some kind of ligand binding domain.; PDB: 2DSY_C 2YZT_A 3KWR_A.
Probab=29.07 E-value=43 Score=17.25 Aligned_cols=33 Identities=12% Similarity=-0.009 Sum_probs=21.3
Q ss_pred hcCcEEEEeCCCCCCCCCCCCCCChhhHHHHHHHHHH
Q 044659 7 ELGVYVLTFDRTGYGESDPKPKRPVKIEAFDIQELAN 43 (169)
Q Consensus 7 ~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~ 43 (169)
..+|.+..||+||+-. ...+.++..+.+++.+.
T Consensus 11 ~~~y~~~~pdlpg~~t----~G~t~eea~~~~~eal~ 43 (48)
T PF03681_consen 11 DGGYVAYFPDLPGCFT----QGDTLEEALENAKEALE 43 (48)
T ss_dssp SSSEEEEETTCCTCEE----EESSHHHHHHHHHHHHH
T ss_pred CCeEEEEeCCccChhh----cCCCHHHHHHHHHHHHH
Confidence 4579999999998741 12336666666555543
No 311
>cd07199 Pat17_PNPLA8_PNPLA9_like Patatin-like phospholipase; includes PNPLA8, PNPLA9, and Pat17. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=28.98 E-value=39 Score=24.60 Aligned_cols=16 Identities=25% Similarity=0.185 Sum_probs=14.1
Q ss_pred EEEEEcchHHHH-HHhh
Q 044659 52 DVIGISILTYLF-GLVS 67 (169)
Q Consensus 52 ~l~G~S~Gg~ia-~~~~ 67 (169)
.+.|.|.||.+| .++.
T Consensus 37 ~i~GtS~G~iia~~l~~ 53 (258)
T cd07199 37 LIAGTSTGGIIALGLAL 53 (258)
T ss_pred eeeeccHHHHHHHHHhc
Confidence 599999999999 7776
No 312
>COG0541 Ffh Signal recognition particle GTPase [Intracellular trafficking and secretion]
Probab=28.52 E-value=3e+02 Score=22.29 Aligned_cols=56 Identities=13% Similarity=0.016 Sum_probs=41.5
Q ss_pred hhhhcCcEEEEeCCCCCCCCCCCCCCChhhHHHHHHHHHHhcCCCCceEEEEEcchHHHH-HHhh
Q 044659 4 FMDELGVYVLTFDRTGYGESDPKPKRPVKIEAFDIQELANQLNLGHKFDVIGISILTYLF-GLVS 67 (169)
Q Consensus 4 ~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~ia-~~~~ 67 (169)
.+.+.+|.|+.+|-.|.= .--++..+.+.++-+.++. ..+.+|=-||=|.-| ..|.
T Consensus 177 ~ak~~~~DvvIvDTAGRl-------~ide~Lm~El~~Ik~~~~P-~E~llVvDam~GQdA~~~A~ 233 (451)
T COG0541 177 KAKEEGYDVVIVDTAGRL-------HIDEELMDELKEIKEVINP-DETLLVVDAMIGQDAVNTAK 233 (451)
T ss_pred HHHHcCCCEEEEeCCCcc-------cccHHHHHHHHHHHhhcCC-CeEEEEEecccchHHHHHHH
Confidence 456778999999988762 2245677777778778877 678888888888888 5554
No 313
>PLN03006 carbonate dehydratase
Probab=28.36 E-value=1.1e+02 Score=23.19 Aligned_cols=29 Identities=24% Similarity=0.143 Sum_probs=24.3
Q ss_pred HHHHHHHHHHhcCCCCceEEEEEcchHHHH
Q 044659 34 EAFDIQELANQLNLGHKFDVIGISILTYLF 63 (169)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~l~G~S~Gg~ia 63 (169)
...-++..+..++. +.|+++|||-=|.+.
T Consensus 158 ~~aSLEYAV~~L~V-~~IVV~GHs~CGaV~ 186 (301)
T PLN03006 158 TKAALEFSVNTLNV-ENILVIGHSRCGGIQ 186 (301)
T ss_pred hhhhHHHHHHHhCC-CEEEEecCCCchHHH
Confidence 45577888999999 899999999877666
No 314
>PLN02154 carbonic anhydrase
Probab=27.69 E-value=1.4e+02 Score=22.55 Aligned_cols=32 Identities=13% Similarity=0.027 Sum_probs=25.3
Q ss_pred HHHHHHHHHHhcCCCCceEEEEEcchHHHH-HHh
Q 044659 34 EAFDIQELANQLNLGHKFDVIGISILTYLF-GLV 66 (169)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~l~G~S~Gg~ia-~~~ 66 (169)
...-++..+..++. +.|+++|||-=|.+. .+.
T Consensus 152 ~~aslEyAv~~L~v-~~IvV~GHs~CGAV~Aal~ 184 (290)
T PLN02154 152 TNSALEFAVTTLQV-ENIIVMGHSNCGGIAALMS 184 (290)
T ss_pred hhhHHHHHHHHhCC-CEEEEecCCCchHHHHHHh
Confidence 45567888899998 899999999777766 443
No 315
>cd07214 Pat17_isozyme_like Patatin-like phospholipase of plants. Pat17 is an isozyme of patatin cloned from Solanum cardiophyllum. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue, and Nu = nucleophile). Patatin-like phospholipase are included in this group. Members of this family have also been found in vertebrates.
Probab=27.51 E-value=39 Score=26.02 Aligned_cols=16 Identities=19% Similarity=0.079 Sum_probs=14.0
Q ss_pred EEEEEcchHHHH-HHhh
Q 044659 52 DVIGISILTYLF-GLVS 67 (169)
Q Consensus 52 ~l~G~S~Gg~ia-~~~~ 67 (169)
.+.|.|.||.+| +++.
T Consensus 46 liaGTStGgiiA~~la~ 62 (349)
T cd07214 46 VIAGTSTGGLITAMLTA 62 (349)
T ss_pred EEeeCCHHHHHHHHHhc
Confidence 589999999999 7766
No 316
>PF00484 Pro_CA: Carbonic anhydrase; InterPro: IPR001765 Carbonic anhydrases (4.2.1.1 from EC) (CA) are zinc metalloenzymes which catalyze the reversible hydration of carbon dioxide. In Escherichia coli, CA (gene cynT) is involved in recycling carbon dioxide formed in the bicarbonate-dependent decomposition of cyanate by cyanase (gene cynS). By this action, it prevents the depletion of cellular bicarbonate []. In photosynthetic bacteria and plant chloroplast, CA is essential to inorganic carbon fixation []. Prokaryotic and plant chloroplast CA are structurally and evolutionary related and form a family distinct from the one which groups the many different forms of eukaryotic CA's (see IPR001148 from INTERPRO). Hypothetical proteins yadF from Escherichia coli and HI1301 from Haemophilus influenzae also belong to this family. This family also includes, YbcF and related proteins, which are inactive homologues of bacterial carbonic anhydrase.; GO: 0004089 carbonate dehydratase activity, 0008270 zinc ion binding; PDB: 1DDZ_B 3LAS_A 2W3N_A 2W3Q_A 1G5C_F 3E2A_A 3E2X_B 2A8C_A 2A8D_D 3E3F_A ....
Probab=27.36 E-value=1.4e+02 Score=19.70 Aligned_cols=31 Identities=10% Similarity=0.008 Sum_probs=23.6
Q ss_pred hhHHHHHHHHHHhcCCCCceEEEEEcchHHHH
Q 044659 32 KIEAFDIQELANQLNLGHKFDVIGISILTYLF 63 (169)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~ia 63 (169)
......++..+..++. +.++++|||-=|.+.
T Consensus 39 ~~~~~sle~av~~l~v-~~IiV~gHt~CGa~~ 69 (153)
T PF00484_consen 39 DSALASLEYAVYHLGV-KEIIVCGHTDCGAIK 69 (153)
T ss_dssp HHHHHHHHHHHHTST--SEEEEEEETT-HHHH
T ss_pred cchhhheeeeeecCCC-CEEEEEcCCCchHHH
Confidence 4555667778888998 899999999877777
No 317
>cd07215 Pat17_PNPLA8_PNPLA9_like2 Patatin-like phospholipase of bacteria. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=27.06 E-value=40 Score=25.66 Aligned_cols=16 Identities=25% Similarity=-0.012 Sum_probs=13.4
Q ss_pred EEEEEcchHHHH-HHhh
Q 044659 52 DVIGISILTYLF-GLVS 67 (169)
Q Consensus 52 ~l~G~S~Gg~ia-~~~~ 67 (169)
.+.|.|.||.+| .++.
T Consensus 43 li~GTStGgiia~~l~~ 59 (329)
T cd07215 43 LVAGTSTGGILTCLYLC 59 (329)
T ss_pred eeeccCHHHHHHHHHhC
Confidence 599999999999 6543
No 318
>PLN03019 carbonic anhydrase
Probab=27.02 E-value=1.1e+02 Score=23.57 Aligned_cols=29 Identities=21% Similarity=0.095 Sum_probs=24.5
Q ss_pred HHHHHHHHHHhcCCCCceEEEEEcchHHHH
Q 044659 34 EAFDIQELANQLNLGHKFDVIGISILTYLF 63 (169)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~l~G~S~Gg~ia 63 (169)
....++..+..++. +.|+++|||-=|.+.
T Consensus 201 v~aSIEYAV~~L~V-~~IVV~GHs~CGaVk 229 (330)
T PLN03019 201 VGAAIEYAVLHLKV-ENIVVIGHSACGGIK 229 (330)
T ss_pred cchhHHHHHHHhCC-CEEEEecCCCchHHH
Confidence 45678889999999 899999999877766
No 319
>COG3675 Predicted lipase [Lipid metabolism]
Probab=26.98 E-value=41 Score=25.37 Aligned_cols=27 Identities=19% Similarity=0.225 Sum_probs=20.9
Q ss_pred HHHHHHHhcCCCCceEEEEEcchHHHH
Q 044659 37 DIQELANQLNLGHKFDVIGISILTYLF 63 (169)
Q Consensus 37 ~~~~~~~~~~~~~~~~l~G~S~Gg~ia 63 (169)
..+.+++.+..+-++.++|||.|+.++
T Consensus 163 q~~~lleeiP~~Yrig~tghS~g~aii 189 (332)
T COG3675 163 QEQTLLEEIPQGYRIGITGHSSGGAII 189 (332)
T ss_pred HHHHHHHhcccceEEEEEeecCCccEE
Confidence 445667777654568999999999998
No 320
>PF07643 DUF1598: Protein of unknown function (DUF1598); InterPro: IPR011487 This is a family of Rhodopirellula baltica hypothetical proteins of about 500 amino acids in length.
Probab=26.55 E-value=1e+02 Score=18.48 Aligned_cols=28 Identities=18% Similarity=0.150 Sum_probs=21.9
Q ss_pred HHHHHhcCCCCceEEEEEcchHHHH--HHhh
Q 044659 39 QELANQLNLGHKFDVIGISILTYLF--GLVS 67 (169)
Q Consensus 39 ~~~~~~~~~~~~~~l~G~S~Gg~ia--~~~~ 67 (169)
..+-++++. +.|.+.|.+....+| +..+
T Consensus 34 ~~l~~~LG~-QdV~V~Gip~~sh~ArvLVeA 63 (84)
T PF07643_consen 34 DGLRQALGP-QDVTVYGIPADSHFARVLVEA 63 (84)
T ss_pred HHHHHHhCC-ceeEEEccCCccHHHHHHHHh
Confidence 445566777 899999999999999 4444
No 321
>KOG4388 consensus Hormone-sensitive lipase HSL [Lipid transport and metabolism]
Probab=25.52 E-value=96 Score=26.15 Aligned_cols=78 Identities=19% Similarity=0.187 Sum_probs=45.4
Q ss_pred hhhhhhcCcEEEEeCCCCCCCCCCCCCCC-hhhHHHHHHHHHH---hcCC-CCceEEEEEcchHHHH-HHhhccccC--C
Q 044659 2 QDFMDELGVYVLTFDRTGYGESDPKPKRP-VKIEAFDIQELAN---QLNL-GHKFDVIGISILTYLF-GLVSNAHHT--G 73 (169)
Q Consensus 2 ~~~l~~~g~~v~~~d~~G~G~s~~~~~~~-~~~~~~~~~~~~~---~~~~-~~~~~l~G~S~Gg~ia-~~~~~~~~~--~ 73 (169)
.+|..+.|+-++.+|+-=- ...+... .++.--.-..+++ .++. +++|+++|-|.||-+. ..+.+.... +
T Consensus 420 r~Wa~aL~cPiiSVdYSLA---PEaPFPRaleEv~fAYcW~inn~allG~TgEriv~aGDSAGgNL~~~VaLr~i~~gvR 496 (880)
T KOG4388|consen 420 RSWAQALGCPIISVDYSLA---PEAPFPRALEEVFFAYCWAINNCALLGSTGERIVLAGDSAGGNLCFTVALRAIAYGVR 496 (880)
T ss_pred HHHHHHhCCCeEEeeeccC---CCCCCCcHHHHHHHHHHHHhcCHHHhCcccceEEEeccCCCcceeehhHHHHHHhCCC
Confidence 3567788899999887532 2222222 4444444344443 3442 4899999999999776 333321111 4
Q ss_pred CcceEEEEe
Q 044659 74 IPAGVALVV 82 (169)
Q Consensus 74 ~p~~~~~~~ 82 (169)
.|.++++..
T Consensus 497 vPDGl~laY 505 (880)
T KOG4388|consen 497 VPDGLMLAY 505 (880)
T ss_pred CCCceEEec
Confidence 457777664
No 322
>PF07521 RMMBL: RNA-metabolising metallo-beta-lactamase; InterPro: IPR011108 The metallo-beta-lactamase fold contains five sequence motifs. The first four motifs are found in IPR001279 from INTERPRO and are common to all metallo-beta-lactamases. The fifth motif appears to be specific to function. This entry represents the fifth motif from metallo-beta-lactamases involved in RNA metabolism [].; PDB: 3ZQ4_D 2I7T_A 2I7V_A 2YCB_B 3BK1_A 3T3N_A 3BK2_A 3T3O_A 3AF5_A 3AF6_A ....
Probab=25.50 E-value=1e+02 Score=15.51 Aligned_cols=32 Identities=25% Similarity=0.301 Sum_probs=20.9
Q ss_pred cEEEEeCCCCCCCCCCCCCCChhhHHHHHHHHHHhcCCCCceEEE
Q 044659 10 VYVLTFDRTGYGESDPKPKRPVKIEAFDIQELANQLNLGHKFDVI 54 (169)
Q Consensus 10 ~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 54 (169)
.+|..+++-||. -.+++..+++.++. ++++++
T Consensus 7 a~v~~~~fSgHa------------d~~~L~~~i~~~~p-~~vilV 38 (43)
T PF07521_consen 7 ARVEQIDFSGHA------------DREELLEFIEQLNP-RKVILV 38 (43)
T ss_dssp SEEEESGCSSS-------------BHHHHHHHHHHHCS-SEEEEE
T ss_pred EEEEEEeecCCC------------CHHHHHHHHHhcCC-CEEEEe
Confidence 566777777775 34577788888866 566654
No 323
>PF00091 Tubulin: Tubulin/FtsZ family, GTPase domain; InterPro: IPR003008 This domain is found in all tubulin chains, as well as the bacterial FtsZ family of proteins. These proteins are involved in polymer formation. Tubulin is the major component of microtubules, while FtsZ is the polymer-forming protein of bacterial cell division, it is part of a ring in the middle of the dividing cell that is required for constriction of cell membrane and cell envelope to yield two daughter cells. FtsZ and tubulin are GTPases, this entry is the GTPase domain. FtsZ can polymerise into tubes, sheets, and rings in vitro and is ubiquitous in bacteria and archaea.; GO: 0051258 protein polymerization, 0043234 protein complex; PDB: 3E22_B 1SA1_D 3DU7_B 2P4N_B 3DCO_B 1Z2B_D 1SA0_B 2XRP_C 1TVK_B 2BTQ_B ....
Probab=25.40 E-value=1e+02 Score=21.78 Aligned_cols=15 Identities=13% Similarity=-0.518 Sum_probs=11.6
Q ss_pred CceEEEEEcchHHHH
Q 044659 49 HKFDVIGISILTYLF 63 (169)
Q Consensus 49 ~~~~l~G~S~Gg~ia 63 (169)
-..+++-||+||-.+
T Consensus 124 ~~~~~i~~slgGGTG 138 (216)
T PF00091_consen 124 LDGFFIVHSLGGGTG 138 (216)
T ss_dssp ESEEEEEEESSSSHH
T ss_pred cccceecccccceec
Confidence 467889999888754
No 324
>cd00884 beta_CA_cladeB Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site. CAs are ubiquitous enzymes involved in fundamental processes like photosynthesis, respiration, pH homeostasis and ion transport. There are three evolutionarily distinct families of CAs (the alpha-, beta-, and gamma-CAs) which show no significant sequence identity or structural similarity. Within the beta-CA family there are four evolutionarily distinct clades (A through D). The beta-CAs are multimeric enzymes (forming dimers,tetramers,hexamers and octamers) which are present in higher plants, algae, fungi, archaea and prokaryotes.
Probab=25.35 E-value=87 Score=21.89 Aligned_cols=32 Identities=19% Similarity=0.012 Sum_probs=25.8
Q ss_pred HHHHHHHHHHhcCCCCceEEEEEcchHHHH-HHh
Q 044659 34 EAFDIQELANQLNLGHKFDVIGISILTYLF-GLV 66 (169)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~l~G~S~Gg~ia-~~~ 66 (169)
...-++..+..++. +.++++|||-=|.+. .+.
T Consensus 73 ~~asleyav~~l~v-~~ivV~GH~~Cgav~Aa~~ 105 (190)
T cd00884 73 TSAAIEYAVAVLKV-EHIVVCGHSDCGGIRALLS 105 (190)
T ss_pred hhhhHHHHHHHhCC-CEEEEeCCCcchHHHHHhc
Confidence 45677888899998 899999999877777 444
No 325
>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=25.31 E-value=1.2e+02 Score=23.01 Aligned_cols=32 Identities=22% Similarity=0.068 Sum_probs=23.8
Q ss_pred HHHHHHHHhcCC---CCceEEEEEc--chHHHH-HHhh
Q 044659 36 FDIQELANQLNL---GHKFDVIGIS--ILTYLF-GLVS 67 (169)
Q Consensus 36 ~~~~~~~~~~~~---~~~~~l~G~S--~Gg~ia-~~~~ 67 (169)
.-+.+++++.+. ++++.++|.| ||.-++ .+..
T Consensus 144 ~aii~lL~~~~i~l~Gk~V~vIG~s~ivG~PmA~~L~~ 181 (301)
T PRK14194 144 SGCLRLLEDTCGDLTGKHAVVIGRSNIVGKPMAALLLQ 181 (301)
T ss_pred HHHHHHHHHhCCCCCCCEEEEECCCCccHHHHHHHHHH
Confidence 345667777653 4789999997 999999 6654
No 326
>cd01819 Patatin_and_cPLA2 Patatins and Phospholipases. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates. This family also includes the catalytic domain of cytosolic phospholipase A2 (PLA2; EC 3.1.1.4) hydrolyzes the sn-2-acyl ester bond of phospholipids to release arachidonic acid. At the active site, cPLA2 contains a serine nucleophile through which the catalytic mechanism is initiated. The active site is partially covered by a solvent-accessible flexible lid. cPLA2 displays interfacial activation as it exists in both "closed lid" and "open lid" forms.
Probab=25.23 E-value=1.3e+02 Score=19.97 Aligned_cols=17 Identities=18% Similarity=-0.005 Sum_probs=13.8
Q ss_pred ceEEEEEcchHHHH-HHh
Q 044659 50 KFDVIGISILTYLF-GLV 66 (169)
Q Consensus 50 ~~~l~G~S~Gg~ia-~~~ 66 (169)
.-.+.|.|.|+.++ .++
T Consensus 29 ~~~~~G~SaGa~~~~~~~ 46 (155)
T cd01819 29 VTYLAGTSGGAWVAATLY 46 (155)
T ss_pred CCEEEEEcHHHHHHHHHh
Confidence 45788999999999 655
No 327
>TIGR02883 spore_cwlD N-acetylmuramoyl-L-alanine amidase CwlD. Members of this protein family are the CwlD family of N-acetylmuramoyl-L-alanine amidase. This family has been called the germination-specific N-acetylmuramoyl-L-alanine amidase. CwlD is required, along with the putative deactylase PdaA, to make muramic delta-lactam, a novel peptidoglycan constituent found only in spores. CwlD mutants show a germination defect.
Probab=25.07 E-value=2.1e+02 Score=19.78 Aligned_cols=34 Identities=15% Similarity=0.189 Sum_probs=18.7
Q ss_pred EEeCCCCCCCCCCCCCC-C-------hhhHHHHHHHHHHhcCC
Q 044659 13 LTFDRTGYGESDPKPKR-P-------VKIEAFDIQELANQLNL 47 (169)
Q Consensus 13 ~~~d~~G~G~s~~~~~~-~-------~~~~~~~~~~~~~~~~~ 47 (169)
|++| ||||..++.... . ..+.+.-+...+++.+.
T Consensus 3 I~iD-pGHGg~d~GA~~~~g~~E~~~~l~ia~~l~~~L~~~G~ 44 (189)
T TIGR02883 3 IVID-PGHGGIDGGAVGKDGTLEKDITLEIALKLKDYLQEQGA 44 (189)
T ss_pred EEEe-CCCCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHhCCC
Confidence 4444 799988764322 1 33444455566666653
No 328
>PF02310 B12-binding: B12 binding domain; InterPro: IPR006158 The cobalamin (vitamin B12) binding domain can bind two different forms of the cobalamin cofactor, with cobalt bonded either to a methyl group (methylcobalamin) or to 5'-deoxyadenosine (adenosylcobalamin). Cobalamin-binding domains are mainly found in two families of enzymes present in animals and prokaryotes, which perform distinct kinds of reactions at the cobalt-carbon bond. Enzymes that require methylcobalamin carry out methyl transfer reactions. Enzymes that require adenosylcobalamin catalyse reactions in which the first step is the cleavage of adenosylcobalamin to form cob(II)alamin and the 5'-deoxyadenosyl radical, and thus act as radical generators. In both types of enzymes the B12-binding domain uses a histidine to bind the cobalt atom of cobalamin cofactors. This histidine is embedded in a DXHXXG sequence, the most conserved primary sequence motif of the domain [, , ]. Proteins containing the cobalamin-binding domain include: Animal and prokaryotic methionine synthase (2.1.1.13 from EC), which catalyse the transfer of a methyl group from methyl-cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Animal and prokaryotic methylmalonyl-CoA mutase (5.4.99.2 from EC), which are involved in the degradation of several amino acids, odd-chain fatty acids and cholesterol via propionyl-CoA to the tricarboxylic acid cycle. Prokaryotic lysine 5,6-aminomutase (5.4.3.4 from EC). Prokaryotic glutamate mutase (5.4.99.1 from EC) []. Prokaryotic methyleneglutarate mutase (5.4.99.4 from EC). Prokaryotic isobutyryl-CoA mutase (5.4.99.13 from EC). The core structure of the cobalamin-binding domain is characterised by a five-stranded alpha/beta (Rossmann) fold, which consists of 5 parallel beta-sheets surrounded by 4-5 alpha helices in three layers (alpha/beta/alpha) []. Upon binding cobalamin, important elements of the binding site appear to become structured, including an alpha-helix that forms on one side of the cleft accommodating the nucleotide 'tail' of the cofactor. In cobalamin, the cobalt atom can be either free (dmb-off) or bound to dimethylbenzimidazole (dmb-on) according to the pH. When bound to the cobalamin-binding domain, the dimethylbenzimidazole ligand is replaced by the active histidine (His-on) of the DXHXXG motif. The replacement of dimethylbenzimidazole by histidine allows switching between the catalytic and activation cycles []. In methionine synthase the cobalamin cofactor is sandwiched between the cobalamin-binding domain and an approximately 90 residues N-terminal domain forming a helical bundle comprising two pairs of antiparallel helices []. In methionine synthase, there is a second, adjacent domain involved in cobalamin binding that forms a 4-helical bundle cap (IPR003759 from INTERPRO); in the conversion to the active conformation of this enzyme, the 4-helical cap rotates to allow the cobalamin cofactor to bind the activation domain (IPR004223 from INTERPRO) [].; GO: 0031419 cobalamin binding, 0046872 metal ion binding; PDB: 1Y80_A 3BUL_A 1K7Y_A 1BMT_A 3IV9_A 1K98_A 3IVA_A 3KP1_A 3KOW_A 3KOZ_A ....
Probab=25.00 E-value=1.8e+02 Score=17.96 Aligned_cols=46 Identities=15% Similarity=0.055 Sum_probs=25.9
Q ss_pred hhhhhhcCcEEEEeCCCCCCCCCCCCCCChhhHHHHHHHHHHhcCCCCceEEEEEcchHHHH
Q 044659 2 QDFMDELGVYVLTFDRTGYGESDPKPKRPVKIEAFDIQELANQLNLGHKFDVIGISILTYLF 63 (169)
Q Consensus 2 ~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~ia 63 (169)
...|++.||.|..+|..-.. +++.+.+...+. +++.+..+++....
T Consensus 21 a~~l~~~G~~v~~~d~~~~~--------------~~l~~~~~~~~p--d~V~iS~~~~~~~~ 66 (121)
T PF02310_consen 21 AAYLRKAGHEVDILDANVPP--------------EELVEALRAERP--DVVGISVSMTPNLP 66 (121)
T ss_dssp HHHHHHTTBEEEEEESSB-H--------------HHHHHHHHHTTC--SEEEEEESSSTHHH
T ss_pred HHHHHHCCCeEEEECCCCCH--------------HHHHHHHhcCCC--cEEEEEccCcCcHH
Confidence 34577789999888665321 555555555544 35444443454443
No 329
>PF03698 UPF0180: Uncharacterised protein family (UPF0180); InterPro: IPR005370 The members of this family are small uncharacterised proteins.
Probab=24.91 E-value=46 Score=19.77 Aligned_cols=17 Identities=18% Similarity=0.370 Sum_probs=13.3
Q ss_pred hhhhhhcCcEEEEeCCC
Q 044659 2 QDFMDELGVYVLTFDRT 18 (169)
Q Consensus 2 ~~~l~~~g~~v~~~d~~ 18 (169)
.+.|.++||.|+-++-.
T Consensus 14 ~~~L~~~GyeVv~l~~~ 30 (80)
T PF03698_consen 14 KEALREKGYEVVDLENE 30 (80)
T ss_pred HHHHHHCCCEEEecCCc
Confidence 46788999999888733
No 330
>PTZ00445 p36-lilke protein; Provisional
Probab=24.64 E-value=2.7e+02 Score=20.10 Aligned_cols=58 Identities=21% Similarity=0.195 Sum_probs=30.9
Q ss_pred hhhhhhcCcEEEEeCCCCC-----CCCCCCCC---CC-hhhHHHHHHHHHHhcC-CCCceEEEEEcch
Q 044659 2 QDFMDELGVYVLTFDRTGY-----GESDPKPK---RP-VKIEAFDIQELANQLN-LGHKFDVIGISIL 59 (169)
Q Consensus 2 ~~~l~~~g~~v~~~d~~G~-----G~s~~~~~---~~-~~~~~~~~~~~~~~~~-~~~~~~l~G~S~G 59 (169)
.+.|++.|.++++.|+=-- -+-...+. .. +.-...++..+++++. .+=+++|+=+|-=
T Consensus 35 v~~L~~~GIk~Va~D~DnTlI~~HsgG~~~~~~~~~~~~~~~tpefk~~~~~l~~~~I~v~VVTfSd~ 102 (219)
T PTZ00445 35 VDLLNECGIKVIASDFDLTMITKHSGGYIDPDNDDIRVLTSVTPDFKILGKRLKNSNIKISVVTFSDK 102 (219)
T ss_pred HHHHHHcCCeEEEecchhhhhhhhcccccCCCcchhhhhccCCHHHHHHHHHHHHCCCeEEEEEccch
Confidence 4678899999999997431 00011121 11 2223334455554442 1236888888843
No 331
>PLN03014 carbonic anhydrase
Probab=24.52 E-value=1.3e+02 Score=23.35 Aligned_cols=29 Identities=21% Similarity=0.095 Sum_probs=24.3
Q ss_pred HHHHHHHHHHhcCCCCceEEEEEcchHHHH
Q 044659 34 EAFDIQELANQLNLGHKFDVIGISILTYLF 63 (169)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~l~G~S~Gg~ia 63 (169)
...-++..+..++. +.|+++|||-=|.+.
T Consensus 206 v~asLEYAV~~L~V-~~IVV~GHs~CGaV~ 234 (347)
T PLN03014 206 VGAAIEYAVLHLKV-ENIVVIGHSACGGIK 234 (347)
T ss_pred chhHHHHHHHHhCC-CEEEEeCCCCchHHH
Confidence 45678888999998 899999999777666
No 332
>PLN00416 carbonate dehydratase
Probab=24.38 E-value=96 Score=22.93 Aligned_cols=32 Identities=16% Similarity=0.044 Sum_probs=25.3
Q ss_pred HHHHHHHHHHhcCCCCceEEEEEcchHHHH-HHh
Q 044659 34 EAFDIQELANQLNLGHKFDVIGISILTYLF-GLV 66 (169)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~l~G~S~Gg~ia-~~~ 66 (169)
...-++..+..++. +.|+++|||-=|.+. .+.
T Consensus 126 ~~asLEyAv~~L~V-~~IVV~GHs~CGaV~Aa~~ 158 (258)
T PLN00416 126 VGAAVEYAVVHLKV-ENILVIGHSCCGGIKGLMS 158 (258)
T ss_pred chhHHHHHHHHhCC-CEEEEecCCCchHHHHHHh
Confidence 44567888899998 899999999877776 443
No 333
>PF12165 DUF3594: Domain of unknown function (DUF3594); InterPro: IPR021998 This presumed domain is functionally uncharacterised.This domain family is found in eukaryotes, and is approximately 140 amino acids in length. The family is found in association with PF00628 from PFAM.
Probab=23.81 E-value=98 Score=20.21 Aligned_cols=37 Identities=16% Similarity=0.092 Sum_probs=27.9
Q ss_pred hhhHHHHHHHHHHhcCCC-CceEEEEEcchHHHH-HHhh
Q 044659 31 VKIEAFDIQELANQLNLG-HKFDVIGISILTYLF-GLVS 67 (169)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~-~~~~l~G~S~Gg~ia-~~~~ 67 (169)
+.....|++++.++-+.+ +..+|+||+-|.+-. .-+.
T Consensus 18 v~ALT~dve~Fy~~CDP~kenLCLYG~p~~~WeV~lP~e 56 (137)
T PF12165_consen 18 VRALTTDVEEFYQQCDPEKENLCLYGHPDGTWEVNLPAE 56 (137)
T ss_pred HHHHHHHHHHHHHhcCccccceEEecCCCCCeEEeCChH
Confidence 566677778887776643 569999999999887 5555
No 334
>PF08902 DUF1848: Domain of unknown function (DUF1848); InterPro: IPR014998 This group of proteins are functionally uncharacterised. The C terminus contains a cluster of cysteines that are similar to the iron-sulphur cluster found at the N terminus of IPR007197 from INTERPRO.
Probab=23.48 E-value=3.2e+02 Score=20.41 Aligned_cols=47 Identities=23% Similarity=0.332 Sum_probs=33.0
Q ss_pred hhhhcCcEE-EEeCCCCCCCCCCCCCCChhhHHHHHHHHHHhcCCCCce
Q 044659 4 FMDELGVYV-LTFDRTGYGESDPKPKRPVKIEAFDIQELANQLNLGHKF 51 (169)
Q Consensus 4 ~l~~~g~~v-~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 51 (169)
.|.+.||.. +-+.+-|||..-.+.-.+.++..+.+.++.+.++. +++
T Consensus 67 ~l~~~gy~~yfq~Tit~Y~~~lEp~vP~~~~~i~~f~~Ls~~iG~-~rV 114 (266)
T PF08902_consen 67 ELDERGYPYYFQFTITGYGKDLEPNVPPKDERIETFRELSERIGP-ERV 114 (266)
T ss_pred HHHhCCCceEEEEEeCCCCccccCCCCCHHHHHHHHHHHHHHHCC-CcE
Confidence 355566654 55788899877433334588888899999999985 443
No 335
>PF03575 Peptidase_S51: Peptidase family S51; InterPro: IPR005320 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S51 (clan PC(S)). The type example being dipeptidase E (alpha-aspartyl dipeptidase) from Escherichia coli. The family contains alpha-aspartyl dipeptidases (dipeptidase E) and cyanophycinases. The three-dimensional structure of Salmonella typhimurium aspartyl dipeptidase, peptidase E has been determine at 1.2-A resolution. The structure of this 25kDa enzyme consists of two mixed beta-sheets forming a V, flanked by six alpha-helices. The active site contains a Ser-His-Glu catalytic triad and is the first example of a serine peptidase/protease with a glutamate in the catalytic triad. The active site Ser is located on a strand-helix motif reminiscent of that found in alpha/beta-hydrolases, but the polypeptide fold and the organisation of the catalytic triad differ from those of the known serine proteases. This enzyme appears to represent a new example of convergent evolution of peptidase activity []. Alpha-aspartyl dipeptidase hydrolyses dipeptides containing N-terminal aspartate residues, asp-|-xaa. It does not act on peptides with N-terminal Glu, Asn or Gln, nor does it cleave isoaspartyl peptides. In the cyanobacteria, cyanophycinase is an exopeptidase that catalyses the hydrolytic cleavage of multi-l-arginyl-poly-l-aspartic acid (cyanophycin; a water- insoluble reserve polymer) into aspartate-arginine dipeptides.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3EN0_B 1FYE_A 1FY2_A 3L4E_A.
Probab=23.04 E-value=42 Score=22.31 Aligned_cols=13 Identities=23% Similarity=0.186 Sum_probs=12.1
Q ss_pred eEEEEEcchHHHH
Q 044659 51 FDVIGISILTYLF 63 (169)
Q Consensus 51 ~~l~G~S~Gg~ia 63 (169)
.+++|.|.|+++.
T Consensus 70 ~vi~G~SAGA~i~ 82 (154)
T PF03575_consen 70 GVIIGTSAGAMIL 82 (154)
T ss_dssp SEEEEETHHHHCT
T ss_pred CEEEEEChHHhhc
Confidence 7899999999998
No 336
>KOG2805 consensus tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase [Translation, ribosomal structure and biogenesis]
Probab=23.04 E-value=2.5e+02 Score=21.73 Aligned_cols=45 Identities=18% Similarity=0.201 Sum_probs=30.0
Q ss_pred hhhhhcCcEEEEeCCCCCCCCCCCC-CCChhhHHHHHHHHHHhcCC
Q 044659 3 DFMDELGVYVLTFDRTGYGESDPKP-KRPVKIEAFDIQELANQLNL 47 (169)
Q Consensus 3 ~~l~~~g~~v~~~d~~G~G~s~~~~-~~~~~~~~~~~~~~~~~~~~ 47 (169)
.+|++.||.|..+=|+.--.-+... ....++-.+|...+++++++
T Consensus 23 ~Ll~~~g~~v~gv~M~nWd~~de~~s~cp~e~D~~da~~Vc~~LnI 68 (377)
T KOG2805|consen 23 RLLAARGYNVTGVFMKNWDSLDEFGSQCPAERDWKDAKRVCKQLNI 68 (377)
T ss_pred HHHHhcCCCeeEEeeeccccccccccCCCchhhHHHHHHHHHHhCC
Confidence 4678889999888887662212111 22366667788888888875
No 337
>PF10561 UPF0565: Uncharacterised protein family UPF0565; InterPro: IPR018881 This family of proteins has no known function.
Probab=22.93 E-value=74 Score=24.16 Aligned_cols=19 Identities=21% Similarity=0.256 Sum_probs=16.1
Q ss_pred CceEEEEEcchHHHH-HHhh
Q 044659 49 HKFDVIGISILTYLF-GLVS 67 (169)
Q Consensus 49 ~~~~l~G~S~Gg~ia-~~~~ 67 (169)
.++.|+|+|-|+.+- .++.
T Consensus 193 ~~~~LiGFSKGcvVLNqll~ 212 (303)
T PF10561_consen 193 PPLTLIGFSKGCVVLNQLLY 212 (303)
T ss_pred CceEEEEecCcchHHHHHHH
Confidence 579999999999999 5555
No 338
>KOG2486 consensus Predicted GTPase [General function prediction only]
Probab=22.66 E-value=2.3e+02 Score=21.57 Aligned_cols=42 Identities=19% Similarity=0.012 Sum_probs=22.6
Q ss_pred CcEEEEeCCCCCCCCCCCCCCChhhHHHHH-HHHHHhcCCCCceE
Q 044659 9 GVYVLTFDRTGYGESDPKPKRPVKIEAFDI-QELANQLNLGHKFD 52 (169)
Q Consensus 9 g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 52 (169)
|-+.+..|+||||...-. ...-++|.+-. .+++++-++ .++.
T Consensus 182 ~~~~~~vDlPG~~~a~y~-~~~~~d~~~~t~~Y~leR~nL-v~~F 224 (320)
T KOG2486|consen 182 GKSWYEVDLPGYGRAGYG-FELPADWDKFTKSYLLERENL-VRVF 224 (320)
T ss_pred cceEEEEecCCcccccCC-ccCcchHhHhHHHHHHhhhhh-heee
Confidence 567889999998865321 11233343332 335555554 3443
No 339
>COG0288 CynT Carbonic anhydrase [Inorganic ion transport and metabolism]
Probab=22.44 E-value=1.1e+02 Score=21.80 Aligned_cols=31 Identities=10% Similarity=-0.079 Sum_probs=26.6
Q ss_pred hhHHHHHHHHHHhcCCCCceEEEEEcchHHHH
Q 044659 32 KIEAFDIQELANQLNLGHKFDVIGISILTYLF 63 (169)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~ia 63 (169)
......++..+..++. +.|+++||+-=|.+.
T Consensus 76 ~~~l~sleyAv~~L~v-~~IiV~GH~~CGav~ 106 (207)
T COG0288 76 GSVLRSLEYAVYVLGV-KEIIVCGHTDCGAVK 106 (207)
T ss_pred cchhHHHHHHHHHcCC-CEEEEecCCCcHHHH
Confidence 4667778889999999 899999999877777
No 340
>COG4667 Predicted esterase of the alpha-beta hydrolase superfamily [General function prediction only]
Probab=22.29 E-value=1.8e+02 Score=21.89 Aligned_cols=30 Identities=17% Similarity=0.009 Sum_probs=22.5
Q ss_pred HHHHHHHhcCCCCceEEEEEcchHHHH-HHhh
Q 044659 37 DIQELANQLNLGHKFDVIGISILTYLF-GLVS 67 (169)
Q Consensus 37 ~~~~~~~~~~~~~~~~l~G~S~Gg~ia-~~~~ 67 (169)
-+.+++.+.+. .--.++|.|+|+.-. .+.+
T Consensus 29 VLD~fl~a~~~-~f~~~~GvSAGA~n~~aYls 59 (292)
T COG4667 29 VLDEFLRANFN-PFDLVVGVSAGALNLVAYLS 59 (292)
T ss_pred HHHHHHHhccC-CcCeeeeecHhHHhHHHHhh
Confidence 45667766554 344699999999999 8888
No 341
>COG1255 Uncharacterized protein conserved in archaea [Function unknown]
Probab=22.23 E-value=49 Score=21.32 Aligned_cols=17 Identities=29% Similarity=0.266 Sum_probs=13.7
Q ss_pred hhhhhhcCcEEEEeCCC
Q 044659 2 QDFMDELGVYVLTFDRT 18 (169)
Q Consensus 2 ~~~l~~~g~~v~~~d~~ 18 (169)
++.|++.||.|++.|--
T Consensus 29 A~~L~e~g~dv~atDI~ 45 (129)
T COG1255 29 AKRLAERGFDVLATDIN 45 (129)
T ss_pred HHHHHHcCCcEEEEecc
Confidence 46788889999998864
No 342
>KOG2299 consensus Ribonuclease HI [Replication, recombination and repair]
Probab=22.19 E-value=1.2e+02 Score=22.53 Aligned_cols=32 Identities=19% Similarity=0.279 Sum_probs=26.0
Q ss_pred CCCCcchH---HHHHHHhCCCcEEEEecCCCceee
Q 044659 135 HKDKLVPF---HRYRAKKLPRIRYHEGSAGGHLMI 166 (169)
Q Consensus 135 ~~D~~v~~---~~~~~~~~~~~~~~~~~~~gH~~~ 166 (169)
-=|++-|+ ++++.+++|++++.+-+.+.-.++
T Consensus 143 yVDTVGpp~~Yq~kLek~FP~~k~tV~kKADSlfp 177 (301)
T KOG2299|consen 143 YVDTVGPPAKYQEKLEKRFPGIKFTVTKKADSLFP 177 (301)
T ss_pred EEecCCChHHHHHHHHhhCCCeEEEEeeccccccc
Confidence 34888888 999999999999998888776554
No 343
>PRK03094 hypothetical protein; Provisional
Probab=22.16 E-value=59 Score=19.34 Aligned_cols=15 Identities=20% Similarity=0.310 Sum_probs=12.2
Q ss_pred hhhhhhcCcEEEEeC
Q 044659 2 QDFMDELGVYVLTFD 16 (169)
Q Consensus 2 ~~~l~~~g~~v~~~d 16 (169)
.+.|.++||.|+-+.
T Consensus 14 ~~~L~~~GYeVv~l~ 28 (80)
T PRK03094 14 QQALKQKGYEVVQLR 28 (80)
T ss_pred HHHHHHCCCEEEecC
Confidence 567899999998664
No 344
>cd08769 DAP_dppA_2 Peptidase M55, D-aminopeptidase dipeptide-binding protein family. M55 Peptidase, D-Aminopeptidase dipeptide-binding protein (dppA; DAP dppA; EC 3.4.11.-) domain: Peptide transport systems are found in many bacterial species and generally function to accumulate intact peptides in the cell, where they are hydrolyzed. The dipeptide-binding protein (dppA) of Bacillus subtilis belongs to the dipeptide ABC transport (dpp) operon expressed early during sporulation. It is a binuclear zinc-dependent, D-specific aminopeptidase. The biologically active enzyme is a homodecamer with active sites buried in its channel. These self-compartmentalizing proteases are characterized by a SXDXEG motif. D-Ala-D-Ala and D-Ala-Gly-Gly are the preferred substrates. Bacillus subtilis dppA is thought to function as an adaptation to nutrient deficiency; hydrolysis of its substrate releases D-Ala which can be used subsequently as metabolic fuel. This family also contains a number of uncharacteriz
Probab=22.10 E-value=1.5e+02 Score=22.11 Aligned_cols=33 Identities=15% Similarity=0.197 Sum_probs=24.0
Q ss_pred CCCCceEEEEeCCCCcchHHHHHHHhCCCcEEEEecC
Q 044659 124 NNEESVYLCQGHKDKLVPFHRYRAKKLPRIRYHEGSA 160 (169)
Q Consensus 124 ~~~~P~l~~~g~~D~~v~~~~~~~~~~~~~~~~~~~~ 160 (169)
...+|++++.|++- . .+...+..|+++++.++.
T Consensus 145 ~~gVPV~lVsGDd~-~---~~ea~~~~P~~~tv~vK~ 177 (270)
T cd08769 145 EFGVPVVLVAGDSE-L---EKEVKEETPWAVFVPTKE 177 (270)
T ss_pred hcCCCEEEEecCHH-H---HHHHHHhCCCceEEEEee
Confidence 37889999999871 1 455556669988887763
No 345
>PRK15219 carbonic anhydrase; Provisional
Probab=21.93 E-value=1.2e+02 Score=22.27 Aligned_cols=32 Identities=6% Similarity=-0.130 Sum_probs=25.4
Q ss_pred HHHHHHHHHHhcCCCCceEEEEEcchHHHH-HHh
Q 044659 34 EAFDIQELANQLNLGHKFDVIGISILTYLF-GLV 66 (169)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~l~G~S~Gg~ia-~~~ 66 (169)
...-+++.+..++. +.|+++|||-=|.+. .+.
T Consensus 129 ~~~slEyAv~~L~v-~~IvVlGHt~CGav~Aa~~ 161 (245)
T PRK15219 129 LLGSMEFACAVAGA-KVVLVMGHTACGAVKGAID 161 (245)
T ss_pred hhhHHHHHHHHcCC-CEEEEecCCcchHHHHHHh
Confidence 45567888899998 799999999877777 443
No 346
>KOG0781 consensus Signal recognition particle receptor, alpha subunit [Intracellular trafficking, secretion, and vesicular transport]
Probab=21.84 E-value=2.1e+02 Score=23.60 Aligned_cols=50 Identities=12% Similarity=0.055 Sum_probs=32.7
Q ss_pred hhhhcCcEEEEeCCCCCCCCCCCCCCChhhHHHHHHHHHHhcCCCCceEEEEEcchHH
Q 044659 4 FMDELGVYVLTFDRTGYGESDPKPKRPVKIEAFDIQELANQLNLGHKFDVIGISILTY 61 (169)
Q Consensus 4 ~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~ 61 (169)
..++.||.|+.+|-.|.=.. -......+..+++.-.. +.|..+|--+=|-
T Consensus 461 ~a~~~gfDVvLiDTAGR~~~-------~~~lm~~l~k~~~~~~p-d~i~~vgealvg~ 510 (587)
T KOG0781|consen 461 EARNQGFDVVLIDTAGRMHN-------NAPLMTSLAKLIKVNKP-DLILFVGEALVGN 510 (587)
T ss_pred HHHhcCCCEEEEeccccccC-------ChhHHHHHHHHHhcCCC-ceEEEehhhhhCc
Confidence 45677999999999876322 22355566666666666 6777777655443
No 347
>PLN02752 [acyl-carrier protein] S-malonyltransferase
Probab=21.67 E-value=60 Score=24.80 Aligned_cols=16 Identities=19% Similarity=0.202 Sum_probs=12.7
Q ss_pred EEEEEcchHHHH-HHhh
Q 044659 52 DVIGISILTYLF-GLVS 67 (169)
Q Consensus 52 ~l~G~S~Gg~ia-~~~~ 67 (169)
.++|||+|=+.| .++.
T Consensus 127 ~~~GHSlGE~aA~~~AG 143 (343)
T PLN02752 127 VCAGLSLGEYTALVFAG 143 (343)
T ss_pred eeeeccHHHHHHHHHhC
Confidence 579999999888 5544
No 348
>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA. Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.
Probab=21.66 E-value=91 Score=31.13 Aligned_cols=27 Identities=15% Similarity=-0.057 Sum_probs=20.7
Q ss_pred HHHHhcCCCCceEEEEEcchHHHH-HHhh
Q 044659 40 ELANQLNLGHKFDVIGISILTYLF-GLVS 67 (169)
Q Consensus 40 ~~~~~~~~~~~~~l~G~S~Gg~ia-~~~~ 67 (169)
++++++++ ++-.++|||+|=+.| .++.
T Consensus 666 ~lL~~~Gi-~Pd~v~GHSlGE~aAa~aAG 693 (2582)
T TIGR02813 666 KLFTQAGF-KADMTAGHSFGELSALCAAG 693 (2582)
T ss_pred HHHHHcCC-ccceeecCCHHHHHHHHHhC
Confidence 34567777 788899999999888 5543
No 349
>cd06270 PBP1_GalS_like Ligand binding domain of DNA transcription iso-repressor GalS, which is one of two regulatory proteins involved in galactose transport and metabolism. Ligand binding domain of DNA transcription iso-repressor GalS, which is one of two regulatory proteins involved in galactose transport and metabolism. Transcription of the galactose regulon genes is regulated by Gal iso-repressor (GalS) and Gal repressor (GalR) in different ways, but both repressors recognize the same DNA binding site in the absence of D-galactose. GalS is a dimeric protein like GalR,and its major role is in regulating expression of the high-affinity galactose transporter encoded by the mgl operon, whereas GalR is the exclusive regulator of galactose permease, the low-affinity galactose transporter. GalS and GalR are members of the LacI-GalR family of transcription regulators and both contain the type I periplasmic binding protein-like fold. Hence, they are homologous to the periplasmic sugar bindi
Probab=21.54 E-value=2.4e+02 Score=19.99 Aligned_cols=56 Identities=13% Similarity=-0.045 Sum_probs=28.9
Q ss_pred hhhhcCcEEEEeCCCCCCCCCCCCCCChhhHHHHHHHHHHhcCCCCceEEEEEcchH
Q 044659 4 FMDELGVYVLTFDRTGYGESDPKPKRPVKIEAFDIQELANQLNLGHKFDVIGISILT 60 (169)
Q Consensus 4 ~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg 60 (169)
.+.+.|..++.+|....+.....-..+.......+.+.+-..+. .++.+++.+.+.
T Consensus 73 ~~~~~~ipvV~~~~~~~~~~~~~v~~d~~~~~~~~~~~l~~~g~-~~i~~i~~~~~~ 128 (268)
T cd06270 73 ELAAQVPPLVLINRHIPGLADRCIWLDNEQGGYLATEHLIELGH-RKIACITGPLTK 128 (268)
T ss_pred HHhhCCCCEEEEeccCCCCCCCeEEECcHHHHHHHHHHHHHCCC-ceEEEEeCCccc
Confidence 35566888888886432211111111233344444444444465 678888766543
No 350
>PF08496 Peptidase_S49_N: Peptidase family S49 N-terminal; InterPro: IPR013703 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain is found to the N terminus of bacterial signal peptidases that belong to the MEROPS peptidase family S49 (protease IV family, clan SK) (see also IPR002142 from INTERPRO) [, ]. ; GO: 0004252 serine-type endopeptidase activity, 0005886 plasma membrane
Probab=21.49 E-value=2.1e+02 Score=19.33 Aligned_cols=50 Identities=12% Similarity=-0.083 Sum_probs=36.8
Q ss_pred CcEEEEeCCCCCCCCCCCCCCChhhHHHHHHHHHHhcCCCCceEEEEEcchHHHH
Q 044659 9 GVYVLTFDRTGYGESDPKPKRPVKIEAFDIQELANQLNLGHKFDVIGISILTYLF 63 (169)
Q Consensus 9 g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~ia 63 (169)
.=+++..|+-|-= ....++...+.+.+++.-...++.+.+-=-|-||++-
T Consensus 97 ~~r~~VldF~Gdi-----~A~~v~~LReeisail~~a~~~DeV~~rLES~GG~Vh 146 (155)
T PF08496_consen 97 KPRLFVLDFKGDI-----KASEVESLREEISAILSVATPEDEVLVRLESPGGMVH 146 (155)
T ss_pred CCeEEEEecCCCc-----cHHHHHHHHHHHHHHHHhCCCCCeEEEEEecCCceee
Confidence 4678888887642 1223777788888888777665788888899999887
No 351
>PF06792 UPF0261: Uncharacterised protein family (UPF0261); InterPro: IPR008322 The proteins in this entry are functionally uncharacterised.
Probab=21.44 E-value=4.3e+02 Score=21.13 Aligned_cols=67 Identities=25% Similarity=0.242 Sum_probs=41.9
Q ss_pred hhhhhcCcEEEEeCCCCCCCCCCCCCCC------------------------hhhHHHHHHHHHHhcC----CCCceEEE
Q 044659 3 DFMDELGVYVLTFDRTGYGESDPKPKRP------------------------VKIEAFDIQELANQLN----LGHKFDVI 54 (169)
Q Consensus 3 ~~l~~~g~~v~~~d~~G~G~s~~~~~~~------------------------~~~~~~~~~~~~~~~~----~~~~~~l~ 54 (169)
+.+.+.|..++..|--=.|........+ ++...+-+..++..+. + +-++=+
T Consensus 22 ~~i~~~G~~v~~iDvg~~~~~~~~~di~~~eVa~~~g~~~~~~~~~~dRg~ai~~M~~ga~~~v~~l~~~g~i-~Gvi~~ 100 (403)
T PF06792_consen 22 DQIEAQGVEVLLIDVGTLGEPSFPPDISREEVARAAGDSIEAVRSSGDRGEAIEAMARGAARFVSDLYDEGKI-DGVIGI 100 (403)
T ss_pred HHHHHCCCcEEEEEcCCCCCCCCCCCcCHHHHHHhcCCChHHhhccCCHHHHHHHHHHHHHHHHHHHHhcCCc-cEEEEe
Confidence 4567789999999976555443221111 2222222333333332 3 457889
Q ss_pred EEcchHHHH-HHhhccccCCCc
Q 044659 55 GISILTYLF-GLVSNAHHTGIP 75 (169)
Q Consensus 55 G~S~Gg~ia-~~~~~~~~~~~p 75 (169)
|-|.|..++ .++. ..|
T Consensus 101 GGs~GT~lat~aMr-----~LP 117 (403)
T PF06792_consen 101 GGSGGTALATAAMR-----ALP 117 (403)
T ss_pred cCCccHHHHHHHHH-----hCC
Confidence 999999999 8888 888
No 352
>PLN02633 palmitoyl protein thioesterase family protein
Probab=21.32 E-value=1.5e+02 Score=22.71 Aligned_cols=30 Identities=7% Similarity=-0.065 Sum_probs=21.5
Q ss_pred CCCceEEEEeCCCCcchH----HHHHHHhCCCcE
Q 044659 125 NEESVYLCQGHKDKLVPF----HRYRAKKLPRIR 154 (169)
Q Consensus 125 ~~~P~l~~~g~~D~~v~~----~~~~~~~~~~~~ 154 (169)
...|++++||-.|.+..+ ..++.+..|+.-
T Consensus 24 ~~~P~ViwHG~GD~c~~~g~~~~~~l~~~~~g~~ 57 (314)
T PLN02633 24 VSVPFIMLHGIGTQCSDATNANFTQLLTNLSGSP 57 (314)
T ss_pred CCCCeEEecCCCcccCCchHHHHHHHHHhCCCCc
Confidence 456799999999999876 344446666543
No 353
>COG1246 ArgA N-acetylglutamate synthase and related acetyltransferases [Amino acid transport and metabolism]
Probab=20.80 E-value=1.6e+02 Score=19.96 Aligned_cols=42 Identities=14% Similarity=0.130 Sum_probs=26.5
Q ss_pred EEeCCCCCCCCCCCCCCChhhHHHHHHHHHHhcCCCCceEEEEEcchHHHH
Q 044659 13 LTFDRTGYGESDPKPKRPVKIEAFDIQELANQLNLGHKFDVIGISILTYLF 63 (169)
Q Consensus 13 ~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~ia 63 (169)
+-||++|.|.. .....-+....+.+++ ++++++-.+-.++..
T Consensus 73 V~pd~r~~G~G--------~~Ll~~~~~~Ar~~gi-~~lf~LTt~~~~~F~ 114 (153)
T COG1246 73 VHPDYRGSGRG--------ERLLERLLADARELGI-KELFVLTTRSPEFFA 114 (153)
T ss_pred ECHHhcCCCcH--------HHHHHHHHHHHHHcCC-ceeeeeecccHHHHH
Confidence 34556666533 3455556667778888 788887765555555
No 354
>PF03490 Varsurf_PPLC: Variant-surface-glycoprotein phospholipase C; InterPro: IPR003633 Variant-surface-glycoprotein phospholipase C, by hydrolysis of the attached glycolipid, releases soluble variant surface glycoprotein containing phosphoinositol from the cell wall after lysis. It catalyses the conversion of variant-surface-glycoprotein 1,2 didecanoyl-SN-phosphatidylinositol and water to 1,2-didecanoylglycerol and the soluble variant-surface-glycoprotein. It also cleaves similar membrane anchors on some mammalian proteins.; GO: 0047396 glycosylphosphatidylinositol diacylglycerol-lyase activity, 0006650 glycerophospholipid metabolic process
Probab=20.80 E-value=1.1e+02 Score=16.37 Aligned_cols=24 Identities=8% Similarity=0.136 Sum_probs=19.1
Q ss_pred hhhHHHHHHHHHHhcCCCCceEEEE
Q 044659 31 VKIEAFDIQELANQLNLGHKFDVIG 55 (169)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~l~G 55 (169)
.+-|..|+...+..+.+ ..+.++|
T Consensus 8 PqSWM~DLrS~I~~~~I-~ql~ipG 31 (51)
T PF03490_consen 8 PQSWMSDLRSSIGEMAI-TQLFIPG 31 (51)
T ss_pred cHHHHHHHHHHHhccee-eeEEecc
Confidence 45688999999998877 5777776
Done!