Query Summary

Your job contains 1 sequence.

Parameters

Threshold: 0.001

Maximum number of alignments shown: 100

BLAST filter: on

Query Sequence

>044661
MSERHDDDDDENNIDNAFSSLENNCLKILLNSLVLFTRNKRIFSLIFTLTVLPLSFLRFS
LSFSCHAIKNHIYSLEALAGYALTRFESQHVREESRANALSLLRLKFLYFPPSYLLSLVA
AITTVNSAHSAVHNRRFTLQSAIASVKLTWKRPLATTICIYVVLVLYSQLFFVSAAVTGN
NSLSTVPTVFVWAVGSVLQVHLMAVLGLALVVSVLEDRFGFDAVRVGAGMMEGRMVCGWF
LSFWFALMSGLIGWGWEKLMAAMMDGEDFWKGNKWTVVMGSWEKVGLICLHGIEVVWSYV
VTTVFYCEYRKRHVSTNENDSNVFTV

High Scoring Gene Products

Back to top

Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  044661
        (326 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2129211 - symbol:AT4G16850 "AT4G16850" species...   478  1.6e-45   1


>TAIR|locus:2129211 [details] [associations]
            symbol:AT4G16850 "AT4G16850" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
            "cellular_component" evidence=ND] [GO:0008150 "biological_process"
            evidence=ND] EMBL:CP002687 GenomeReviews:CT486007_GR EMBL:AK228804
            IPI:IPI00524840 RefSeq:NP_567518.1 UniGene:At.43504
            UniGene:At.67458 PRIDE:Q0WQ99 EnsemblPlants:AT4G16850.1
            GeneID:827393 KEGG:ath:AT4G16850 TAIR:At4g16850
            HOGENOM:HOG000120692 OMA:FYCECRK PhylomeDB:Q0WQ99
            ProtClustDB:CLSN2689473 Genevestigator:Q0WQ99 Uniprot:Q0WQ99
        Length = 313

 Score = 478 (173.3 bits), Expect = 1.6e-45, P = 1.6e-45
 Identities = 113/288 (39%), Positives = 159/288 (55%)

Query:    29 LLNSLVLFTRNKRIFSLIFTLTVXXXXXXXXXXXXXCHAIKNHIYSLEALAGYALTRFES 88
             LL+S ++  RNK I   IF                    +KNH++ LEALA    TRFE+
Sbjct:    17 LLDSFMILFRNKHILLPIFAFIAIPLAALHLSLTLTSFRLKNHVFRLEALANVVHTRFEA 76

Query:    89 QHVREESRANALSLLRLKFLYFPPSYLLSLVAAITTVNSAHSAVHNRRFTLQSAIASVKL 148
             + + +ESR +A+SLL LKF YF PS++LS +A+IT + S   +      +L+S+ ASVK 
Sbjct:    77 RQIWQESREDAVSLLHLKFRYFVPSFILSCMASITVITSTSFSHQGINPSLKSSFASVKS 136

Query:   149 TWKRPLATTICIYVVLVLYSQL-FFVSAAVTGNNSLSTVPTVFVWAVGSVLQXXXXXXXX 207
             +W R  AT+I +Y +L LYS +  F+SA V    +L  + T+    V    +        
Sbjct:   137 SWMRVTATSIIVYGLLFLYSPISMFLSALVGYTPTLRYLITILFLGV----EVYIMAITG 192

Query:   208 XXXXXXXXEDRFGFDAVRVGAGMMEGRMVCGWFLSFWFALMSGLIGWGWEKLMAAMMDGE 267
                     E+R+GFDA++ G  +M+GR + G  L+  F  +S  IG G EKL A  +D  
Sbjct:   193 LGFVVSVLEERYGFDAIKEGTALMKGRRITGLALAGVFVFLSSFIGHGMEKL-AKELD-M 250

Query:   268 DFWKGNKW--TVVMGSWEKVGLICLHGIEVVWSYVVTTVFYCEYRKRH 313
             D   G+ W   VV G W+   L+C++G EVV SYVV TVFYCE RKRH
Sbjct:   251 DLSSGSWWRSVVVAGGWDGWKLVCMYGAEVVLSYVVITVFYCECRKRH 298


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.326   0.135   0.428    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      326       286   0.00086  115 3  11 22  0.41    33
                                                     33  0.42    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  620 (66 KB)
  Total size of DFA:  223 KB (2120 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  18.84u 0.13s 18.97t   Elapsed:  00:00:01
  Total cpu time:  18.84u 0.13s 18.97t   Elapsed:  00:00:01
  Start:  Fri May 10 04:44:12 2013   End:  Fri May 10 04:44:13 2013

Back to top