BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 044668
(353 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P29677|MPPA_SOLTU Mitochondrial-processing peptidase subunit alpha OS=Solanum
tuberosum GN=MPP PE=1 SV=1
Length = 504
Score = 296 bits (759), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 206/481 (42%), Positives = 258/481 (53%), Gaps = 149/481 (30%)
Query: 10 RFASSSAVASTSSSSGGFYSWLSGEQSTSSPSLDFPLPGICLSHPSSLPDY--------- 60
RF+SS+AVA+ SGG +SW++G+ S+S LDFPL + LS P LPDY
Sbjct: 23 RFSSSAAVAT--KPSGGLFSWITGDTSSSVTPLDFPLNDVKLSPP--LPDYVEPAKTQIT 78
Query: 61 ---------------------FYVDCGSIYESPISFVKTDLLERMAFRSTRDRS------ 93
YVDCGSIYE+P S+ T LLERMAF+ST +RS
Sbjct: 79 TLANGLKVASEASVNPAASIGLYVDCGSIYETPASYGATHLLERMAFKSTLNRSHLRIVR 138
Query: 94 -------NIQASPSREQMGCSFAALETYVPEMVELLTD---------------------- 124
N+ AS SRE M ++ AL+TYVP+MVE+L D
Sbjct: 139 EIEAIGGNVTASASREHMIYTYDALKTYVPQMVEMLADCVRNPAFLDWEVKEQLEKVKAE 198
Query: 125 ISEATRNPQSLLSEAIFSACYSVVLANPLLAPECAISRLNSTLIKEFFAENYTAPWMVLA 184
ISE ++NPQ LL EA+ SA Y+ N L+A E I+RLNST+++EF AENYTAP MVLA
Sbjct: 199 ISEYSKNPQHLLLEAVHSAGYAGPYGNSLMATEATINRLNSTVLEEFVAENYTAPRMVLA 258
Query: 185 ASGVEHDQLVSVEEPLLSDLPISILTKSPD--------LCT------------------L 218
ASGVEH++ + V EPLLSDLP + P C +
Sbjct: 259 ASGVEHEEFLKVAEPLLSDLPKVATIEEPKPVYVGGDYRCQADAEMTHFALAFEVPGGWM 318
Query: 219 EDKDAMTLTVTQMLLEGGGSFSAGGPGKGVYSRLHRRVLNEIPRVQQGVYFCGI------ 272
+K++MTLTV QML+ GGGSFSAGGPGKG+YSRL+ RVLN+ P++ F I
Sbjct: 319 SEKESMTLTVLQMLMGGGGSFSAGGPGKGMYSRLYLRVLNQYPQIHAFSAFSSIYNNTGL 378
Query: 273 ---------------------------TPGEVNQVQLDRAVQSTNSAILMNLESRIVVSE 305
P EV+QVQL+RA Q+T SAILMNLESR+V SE
Sbjct: 379 FGIQGTTSSDFGPQAVDVAVKELIAVANPSEVDQVQLNRAKQATKSAILMNLESRMVASE 438
Query: 306 DIDRQVQTHGEMKP---------------------KLILSPLTMASYGDVINVPSYDAES 344
DI RQ+ T+GE P KLI SPLTMASYGDV+++PSYDA S
Sbjct: 439 DIGRQLLTYGERNPVEHFLKAIDAVSAKDIASVVQKLISSPLTMASYGDVLSLPSYDAVS 498
Query: 345 A 345
+
Sbjct: 499 S 499
>sp|Q9ZU25|MPPA1_ARATH Probable mitochondrial-processing peptidase subunit alpha-1
OS=Arabidopsis thaliana GN=At1g51980 PE=1 SV=1
Length = 503
Score = 272 bits (696), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 196/476 (41%), Positives = 244/476 (51%), Gaps = 145/476 (30%)
Query: 9 ARFASSSAVASTSSSSGGFYSWLSGEQSTSSPSLDFPLPGICLSHP------------SS 56
AR+ASSSAVA TSSS+ + SWLSG + SLD PL G+ L P ++
Sbjct: 23 ARYASSSAVAETSSSTPAYLSWLSGGSRAALTSLDMPLQGVSLPPPLADKVEPSKLQITT 82
Query: 57 LPD----------------YFYVDCGSIYESPISFVKTDLLERMAFRSTRDRS------- 93
LP+ YVDCGSIYE+P T LLERMAF+ST +R+
Sbjct: 83 LPNGLKIASETTPNPAASIGLYVDCGSIYEAPYFHGATHLLERMAFKSTLNRTHFRLVRE 142
Query: 94 ------NIQASPSREQMGCSFAALETYVPEMVELLTD----------------------I 125
N AS SREQM + AL+TYVPEMVE+L D I
Sbjct: 143 IEAIGGNTSASASREQMSYTIDALKTYVPEMVEVLIDSVRNPAFLDWEVNEELRKMKVEI 202
Query: 126 SEATRNPQSLLSEAIFSACYSVVLANPLLAPECAISRLNSTLIKEFFAENYTAPWMVLAA 185
+E +NP L EAI SA YS LA+PL APE A+ RLN L++EF EN+TA MVLAA
Sbjct: 203 AELAKNPMGFLLEAIHSAGYSGPLASPLYAPESALDRLNGELLEEFMTENFTAARMVLAA 262
Query: 186 SGVEHDQLVSVEEPLLSDLP---------------------------ISILTKSPDLCTL 218
SGVEH++L+ V EPL SDLP ++ + P
Sbjct: 263 SGVEHEELLKVAEPLTSDLPNVPPQLAPKSQYVGGDFRQHTGGEATHFAVAFEVPGWNN- 321
Query: 219 EDKDAMTLTVTQMLLEGGGSFSAGGPGKGVYSRLHRRVLNEIPRVQQ------------- 265
+K+A+T TV QML+ GGGSFSAGGPGKG++S L+RRVLNE VQ
Sbjct: 322 -EKEAVTATVLQMLMGGGGSFSAGGPGKGMHSWLYRRVLNEYQEVQSCTAFTSIFNDTGL 380
Query: 266 -GVYFCG------------------ITPGEVNQVQLDRAVQSTNSAILMNLESRIVVSED 306
G+Y C + G+VNQ LDRA +T SA+LMNLESR++ +ED
Sbjct: 381 FGIYGCSSPQFAAKAIELAAKELKDVAGGKVNQAHLDRAKAATKSAVLMNLESRMIAAED 440
Query: 307 IDRQVQTHGEMKP---------------------KLILSPLTMASYGDVINVPSYD 341
I RQ+ T+GE KP K+I PLTM S+GDV+ VPSYD
Sbjct: 441 IGRQILTYGERKPVDQFLKSVDQLTLKDIADFTSKVISKPLTMGSFGDVLAVPSYD 496
>sp|O04308|MPPA2_ARATH Probable mitochondrial-processing peptidase subunit alpha-2
OS=Arabidopsis thaliana GN=MPPA2 PE=1 SV=1
Length = 499
Score = 233 bits (594), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 175/448 (39%), Positives = 223/448 (49%), Gaps = 145/448 (32%)
Query: 40 PSLDFPLPGICLSHP------------SSLPDYF----------------YVDCGSIYES 71
PS++ PL G+ L P ++LP+ YVDCGSIYE+
Sbjct: 50 PSMNIPLAGVSLPPPLSDHVEPSKLKTTTLPNGLTIATEMSPNPAASIGLYVDCGSIYET 109
Query: 72 PISFVKTDLLERMAFRSTRDRS-------------NIQASPSREQMGCSFAALETYVPEM 118
P T LLERMAF+ST +RS N AS SREQMG + AL+TYVPEM
Sbjct: 110 PQFRGATHLLERMAFKSTLNRSHFRLVREIEAIGGNTSASASREQMGYTIDALKTYVPEM 169
Query: 119 VELLTD----------------------ISEATRNPQSLLSEAIFSACYSVVLANPLLAP 156
VE+L D I E NP L EA+ SA YS LANPL AP
Sbjct: 170 VEVLIDSVRNPAFLDWEVNEELRKVKVEIGEFATNPMGFLLEAVHSAGYSGALANPLYAP 229
Query: 157 ECAISRLNSTLIKEFFAENYTAPWMVLAASGVEHDQLVSVEEPLLSDLP----------- 205
E AI+ L +++ F ENYTA MVLAASGV+H++L+ V EPLLSDLP
Sbjct: 230 ESAITGLTGEVLENFVFENYTASRMVLAASGVDHEELLKVVEPLLSDLPNVPRPAEPKSQ 289
Query: 206 ----------------ISILTKSPDLCTLEDKDAMTLTVTQMLLEGGGSFSAGGPGKGVY 249
++ + P +K+A+ TV QML+ GGGSFSAGGPGKG++
Sbjct: 290 YVGGDFRQHTGGEATHFALAFEVPGWNN--EKEAIIATVLQMLMGGGGSFSAGGPGKGMH 347
Query: 250 SRLHRRVLNEIPRVQQ--------------GVYFC------------------GITPGEV 277
S L+ R+LN+ + Q G+Y C + G+V
Sbjct: 348 SWLYLRLLNQHQQFQSCTAFTSVFNNTGLFGIYGCTSPEFASQGIELVASEMNAVADGKV 407
Query: 278 NQVQLDRAVQSTNSAILMNLESRIVVSEDIDRQVQTHGEMKP------------------ 319
NQ LDRA +T SAILMNLESR++ +EDI RQ+ T+GE KP
Sbjct: 408 NQKHLDRAKAATKSAILMNLESRMIAAEDIGRQILTYGERKPVDQFLKTVDQLTLKDIAD 467
Query: 320 ---KLILSPLTMASYGDVINVPSYDAES 344
K+I PLTMA++GDV+NVPSYD+ S
Sbjct: 468 FTSKVITKPLTMATFGDVLNVPSYDSVS 495
>sp|P11914|MPPA_YEAST Mitochondrial-processing peptidase subunit alpha OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=MAS2 PE=1
SV=1
Length = 482
Score = 72.0 bits (175), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 99/372 (26%), Positives = 149/372 (40%), Gaps = 107/372 (28%)
Query: 55 SSLPDYF-----YVDCGSIYESPISFVKTDLLERMAFRSTRD-------------RSNIQ 96
S+ P +F Y+D GS +E T +L+R+AF+ST N Q
Sbjct: 33 SNTPGHFSALGLYIDAGSRFEGRNLKGCTHILDRLAFKSTEHVEGRAMAETLELLGGNYQ 92
Query: 97 ASPSREQMGCSFAALETYVPEMVELLT----------------------DISEATRNPQS 134
+ SRE + + V +M++L++ +I E P+
Sbjct: 93 CTSSRENLMYQASVFNQDVGKMLQLMSETVRFPKITEQELQEQKLSAEYEIDEVWMKPEL 152
Query: 135 LLSEAIFSACYS-VVLANPLLAPECAISRLNSTLIKEFFAENYTAPWMVLAASGVEHDQL 193
+L E + +A YS L +PL+ P I ++ + ++ + YT V A GV H++
Sbjct: 153 VLPELLHTAAYSGETLGSPLICPRELIPSISKYYLLDYRNKFYTPENTVAAFVGVPHEKA 212
Query: 194 VSVEEPLLSDL----------------------PISILTKSPDLCTLE---------DKD 222
+ + E L D P + P+L ++ D
Sbjct: 213 LELTEKYLGDWQSTHPPITKKVAQYTGGESCIPPAPVFGNLPELFHIQIGFEGLPIDHPD 272
Query: 223 AMTLTVTQMLLEGGGSFSAGGPGKGVYSRLHRRVLNEIPRVQQGVYF---------CGIT 273
L Q LL GGGSFSAGGPGKG+YSRL+ VLN+ V+ V F GI+
Sbjct: 273 IYALATLQTLLGGGGSFSAGGPGKGMYSRLYTHVLNQYYFVENCVAFNHSYSDSGIFGIS 332
Query: 274 --------PGEVNQV------------------QLDRAVQSTNSAILMNLESRIVVSEDI 307
P V + ++ RA S++LMNLES++V ED+
Sbjct: 333 LSCIPQAAPQAVEVIAQQMYNTFANKDLRLTEDEVSRAKNQLKSSLLMNLESKLVELEDM 392
Query: 308 DRQVQTHGEMKP 319
RQV HG P
Sbjct: 393 GRQVLMHGRKIP 404
>sp|P11913|MPPB_NEUCR Mitochondrial-processing peptidase subunit beta OS=Neurospora
crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 /
DSM 1257 / FGSC 987) GN=pep PE=1 SV=1
Length = 476
Score = 71.2 bits (173), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 95/393 (24%), Positives = 148/393 (37%), Gaps = 109/393 (27%)
Query: 61 FYVDCGSIYESPISFVKTDLLERMAFRSTRDRSNIQASPSREQMGCS------------F 108
++D GS E+ + LE +AF+ T R+ Q E MG F
Sbjct: 66 MWIDAGSRAETDETNGTAHFLEHLAFKGTTKRTQQQLELEIENMGAHLNAYTSRENTVYF 125
Query: 109 A-ALETYVPEMVELLTDISEATRNPQSL------------------LSEAIFSACYSVV- 148
A AL VP+ V++L DI + ++ +S L E +F ++
Sbjct: 126 AKALNEDVPKCVDILQDILQNSKLEESAIERERDVILRESEEVEKQLEEVVFDHLHATAY 185
Query: 149 ----LANPLLAPECAISRLNSTLIKEFFAENYTAPWMVL-AASGVEHDQLVSVEEPLLSD 203
L +L P I + T + + NYTA MVL A GV H+QLV + + S
Sbjct: 186 QHQPLGRTILGPRENIRDITRTELVNYIKNNYTADRMVLVGAGGVPHEQLVEMADKYFSK 245
Query: 204 LP-------ISILT-KSPDL-----------------------CTLEDKDAMTLTVTQML 232
LP SIL+ K PD + D D T VTQ +
Sbjct: 246 LPATAPVSSASILSKKKPDFIGSDIRIRDDTIPTANIAIAVEGVSWSDDDYFTGLVTQAI 305
Query: 233 LEGGGSFSAGGPGKG--VYSRLHRR-----------------------VLNEIPRVQQGV 267
+ P +G + +H+ V +++ RV V
Sbjct: 306 VGNYDKALGNAPHQGSKLSGFVHKHDLATSFMSFSTSYSDTGLWGIYLVTDKLDRVDDLV 365
Query: 268 YF--------CGITPGEVNQVQLDRAVQSTNSAILMNLESRIVVSEDIDRQVQTHG-EMK 318
+F C V++ +++RA ++IL++L+ V+EDI RQ+ T G M
Sbjct: 366 HFSLREWTRLC----SNVSEAEVERAKAQLKASILLSLDGTTAVAEDIGRQIVTTGRRMS 421
Query: 319 PKLILSPLTMASYGDVI---NVPSYDAESAASS 348
P I + S DV+ N +D + A S+
Sbjct: 422 PAEIERIIDAVSAKDVMDFANKKIWDQDIAISA 454
>sp|P23955|MPPA_NEUCR Mitochondrial-processing peptidase subunit alpha OS=Neurospora
crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 /
DSM 1257 / FGSC 987) GN=mpp PE=1 SV=2
Length = 577
Score = 66.2 bits (160), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 83/195 (42%), Gaps = 47/195 (24%)
Query: 57 LPDYF-----YVDCGSIYESPISFVKTDLLERMAFRSTRDRS-------------NIQAS 98
LPD F Y+D GS YE+ + +++R+AF+ST R+ NIQ +
Sbjct: 68 LPDAFSGVGVYIDAGSRYENDYVRGASHIMDRLAFKSTSTRTADEMLETVEKLGGNIQCA 127
Query: 99 PSREQMGCSFAALETYVPEMVELLTDISEATRNPQ---SLLSEAIFSACYSV-------- 147
SRE M A +P VEL+ +E R+P+ L I +A Y V
Sbjct: 128 SSRESMMYQAATFNKAIPTAVELM---AETIRDPKLTDEELEGQIMTAQYEVNEIWSKAE 184
Query: 148 ---------------VLANPLLAPECAISRLNSTLIKEFFAENYTAPWMVLAASGVEHDQ 192
L NPLL P+ + +N +I+ + Y +V+A +GV H++
Sbjct: 185 LILPELVHMAAFKDNTLGNPLLCPKERLDYINRDVIQTYRDAFYRPERLVVAFAGVPHER 244
Query: 193 LVSVEEPLLSDLPIS 207
V + E D+ S
Sbjct: 245 AVKLAEKYFGDMKAS 259
Score = 51.2 bits (121), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/138 (38%), Positives = 67/138 (48%), Gaps = 36/138 (26%)
Query: 218 LEDKDAMTLTVTQMLLEGGGSFSAGGPGKGVYSRLHRRVLNEIPRVQQGVYF-------- 269
+ D D L Q LL GGGSFSAGGPGKG+YSRL+ VLN+ V+ V F
Sbjct: 368 ISDDDIYALATLQTLLGGGGSFSAGGPGKGMYSRLYTNVLNQHGWVESCVAFNHSYTDSG 427
Query: 270 -CGIT----PGE-----------------------VNQVQLDRAVQSTNSAILMNLESRI 301
GI PG + ++++ RA S++LMNLESR+
Sbjct: 428 LFGIAASCYPGRTLPMLQVMCRELHALTTDHGYSALGELEVSRAKNQLRSSLLMNLESRM 487
Query: 302 VVSEDIDRQVQTHGEMKP 319
V ED+ RQVQ HG P
Sbjct: 488 VELEDLGRQVQVHGRKIP 505
>sp|Q9CZ13|QCR1_MOUSE Cytochrome b-c1 complex subunit 1, mitochondrial OS=Mus musculus
GN=Uqcrc1 PE=1 SV=2
Length = 480
Score = 61.6 bits (148), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 81/178 (45%), Gaps = 37/178 (20%)
Query: 62 YVDCGSIYESPISFVKTDLLERMAFRSTRDR-------------SNIQASPSREQMGCSF 108
++D GS YE+ + LE +AF+ T++R +++ A +RE
Sbjct: 74 WIDAGSRYETEKNNGAGYFLEHLAFKGTKNRPGNALEKEVESIGAHLNAYSTREHTAYLI 133
Query: 109 AALETYVPEMVELLTDI--------SEATRNPQSLLSE----------AIFSACYSVV-- 148
AL +P++VELL DI S+ + +L E +F ++
Sbjct: 134 KALSKDLPKVVELLADIVQNSSLEDSQIEKERDVILREMQENDASMQNVVFDYLHATAFQ 193
Query: 149 ---LANPLLAPECAISRLNSTLIKEFFAENYTAPWMVLAAS-GVEHDQLVSVEEPLLS 202
LA + P + RL+ T + ++ +Y AP MVLAA+ GVEH QL+ + + LS
Sbjct: 194 GTPLAQAVEGPSENVRRLSRTDLTDYLNRHYKAPRMVLAAAGGVEHQQLLDLAQKHLS 251
>sp|Q4W6B5|MPPB_DICDI Mitochondrial-processing peptidase subunit beta OS=Dictyostelium
discoideum GN=mppB PE=1 SV=1
Length = 469
Score = 61.6 bits (148), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 81/188 (43%), Gaps = 38/188 (20%)
Query: 62 YVDCGSIYESPISFVKTDLLERMAFRSTRDR--------------SNIQASPSREQMGCS 107
+VD GS+YE+ + LE M F+ T R ++ A SRE
Sbjct: 61 WVDSGSVYETDKNNGVAHFLEHMIFKGTAKRPTPQSIETEIENMGGSLNAFTSREHSAYY 120
Query: 108 FAALETYVPEMVELLTDISEATRNPQSLL------------------SEAIFSACYSVV- 148
L+ VP V++L+DI + ++ SL+ E +F ++
Sbjct: 121 MKVLKDNVPNAVDILSDILQNSKFETSLIEQERDTILSENDYIQSKEDEVVFDQLHAAAF 180
Query: 149 ----LANPLLAPECAISRLNSTLIKEFFAENYTAPWMVLAASG-VEHDQLVSVEEPLLSD 203
L +L P I + I+EF ENYT +V++A+G V H+QLV + ++
Sbjct: 181 QGSALGRTILGPVENIKSITREQIQEFINENYTGDRLVISAAGAVNHEQLVEQVKEKFAN 240
Query: 204 LPISILTK 211
+ +S ++K
Sbjct: 241 VKMSQVSK 248
>sp|Q5R513|MPPA_PONAB Mitochondrial-processing peptidase subunit alpha OS=Pongo abelii
GN=PMPCA PE=2 SV=2
Length = 525
Score = 60.8 bits (146), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 85/315 (26%), Positives = 130/315 (41%), Gaps = 94/315 (29%)
Query: 131 NPQSLLSEAIFSACYSV-VLANPLLAPECAISRLNSTLIKEFFAENYTAPWMVLAASGVE 189
+P+ LL+E I A Y + P I+++N ++ + YT MVLA GVE
Sbjct: 200 DPEPLLTEMIHEAAYRENTVGLHRFCPTENIAKINREVLHSYLRNYYTPDRMVLAGVGVE 259
Query: 190 HDQLVSVEEPLL------------SDLPISIL--------------------TKSPDL-- 215
H+ LV L D+ S+ T P+L
Sbjct: 260 HEHLVDCARKYLLGIQPAWGSAEAVDIDRSVAQYTGGIAKRERDMSNVSLGPTPIPELTH 319
Query: 216 -------CTLEDKDAMTLTVTQMLLEGGGSFSAGGPGKGVYSRLHRRVLNEI-------- 260
C+ ++D + V M++ GGGSFSAGGPGKG++SRL+ VLN
Sbjct: 320 IMVGLESCSFLEEDFIPFAVLNMMMGGGGSFSAGGPGKGMFSRLYLNVLNRHHWMYNATS 379
Query: 261 ------------------PR-VQQGVYFCG----ITPGEVNQVQLDRAVQSTNSAILMNL 297
PR V++ V + G V+ V+L+RA S ++MNL
Sbjct: 380 YHHSYEDTGLLCIHASADPRQVREMVEIITKEFILMSGTVDAVELERAKTQLTSMLMMNL 439
Query: 298 ESRIVVSEDIDRQVQTH-------------GEMKP--------KLILSPLTMASYGDVIN 336
ESR V+ ED+ RQV +KP K++ +A+ GD+ +
Sbjct: 440 ESRPVIFEDVGRQVLATRSRKLPHELCTLIRNVKPEDVKRVASKMLRGKPAVAALGDLTD 499
Query: 337 VPSYDAESAASSSQN 351
+P+Y+ A SS++
Sbjct: 500 LPTYEHIQTALSSKD 514
>sp|O94745|MPPA_SCHPO Probable mitochondrial-processing peptidase subunit alpha
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=mas2 PE=3 SV=2
Length = 502
Score = 60.5 bits (145), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 94/355 (26%), Positives = 136/355 (38%), Gaps = 103/355 (29%)
Query: 62 YVDCGSIYESPISFVKTDLLERMAFRSTRDR-------------SNIQASPSREQMGCSF 108
YV GS YE+ + ++R+AF++T N S SRE M
Sbjct: 80 YVKAGSRYETKKFSGVSHFMDRLAFQATERTPVGEMKAKLENLGGNYMCSTSRESMIYQA 139
Query: 109 AALETYVPEMVELLTDI----------------------SEATRNPQSLLSE-AIFSACY 145
A V M +LL + SE P +LL E A +A
Sbjct: 140 AVFNDDVKSMSKLLAETVLAPKIQEDDLVHYRDSIIYENSELWTKPDALLGEFAHVTAFQ 199
Query: 146 SVVLANPLLAPECAISRLNSTLIKEFFAENYTAPWMVLAASGVEHDQLVSVEEPLLSDLP 205
+ L N LL ++ + +T I+E+ Y + LA +G+ + + + L LP
Sbjct: 200 NNTLGNCLLCTPDKVNGITATSIREYLKYFYRPEHLTLAYAGIPQEIAKEITKELYGHLP 259
Query: 206 ISIL-------------------TKSPDL---------------CTLEDKDAMTLTVTQM 231
S L +++P + + D D L Q
Sbjct: 260 SSSLPPLEAIPSHYTGGFMGIKKSEAPPVPYQQEFTHVVIAMEGLPVTDPDIYALACLQF 319
Query: 232 LLEGGGSFSAGGPGKGVYSRLHRRVLNEIPRVQQGVYF---------------------- 269
LL GGGSFSAGGPGKG+YSRL+ VLN+ P V+ + F
Sbjct: 320 LLGGGGSFSAGGPGKGMYSRLYLNVLNQYPWVETCMAFNHSYTDSGLFGMFVTILDDAAH 379
Query: 270 ----------CGITPGEVNQVQLDRAVQSTNSAILMNLESRIVVSEDIDRQVQTH 314
C T V + +RA S++LMNLESR++ ED+ RQ+QT
Sbjct: 380 LAAPLIIRELCN-TVLSVTSEETERAKNQLKSSLLMNLESRMISLEDLGRQIQTQ 433
>sp|Q10713|MPPA_HUMAN Mitochondrial-processing peptidase subunit alpha OS=Homo sapiens
GN=PMPCA PE=1 SV=2
Length = 525
Score = 60.5 bits (145), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 86/317 (27%), Positives = 132/317 (41%), Gaps = 98/317 (30%)
Query: 131 NPQSLLSEAIFSACY---SVVLANPLLAPECAISRLNSTLIKEFFAENYTAPWMVLAASG 187
+P+ LL+E I A Y +V L P ++++N ++ + YT MVLA G
Sbjct: 200 DPEPLLTEMIHEAAYRENTVGLHR--FCPTENVAKINREVLHSYLRNYYTPDRMVLAGVG 257
Query: 188 VEHDQLVSVEEPLL------------SDLPISIL--------------------TKSPDL 215
VEH+ LV L D+ S+ T P+L
Sbjct: 258 VEHEHLVDCARKYLLGVQPAWGSAEAVDIDRSVAQYTGGIAKLERDMSNVSLGPTPIPEL 317
Query: 216 ---------CTLEDKDAMTLTVTQMLLEGGGSFSAGGPGKGVYSRLHRRVLNEI------ 260
C+ ++D + V M++ GGGSFSAGGPGKG++SRL+ VLN
Sbjct: 318 THIMVGLESCSFLEEDFIPFAVLNMMMGGGGSFSAGGPGKGMFSRLYLNVLNRHHWMYNA 377
Query: 261 --------------------PR-VQQGVYFCG----ITPGEVNQVQLDRAVQSTNSAILM 295
PR V++ V + G V+ V+L+RA S ++M
Sbjct: 378 TSYHHSYEDTGLLCIHASADPRQVREMVEIITKEFILMGGTVDTVELERAKTQLTSMLMM 437
Query: 296 NLESRIVVSEDIDRQVQTH-------------GEMKP--------KLILSPLTMASYGDV 334
NLESR V+ ED+ RQV +KP K++ +A+ GD+
Sbjct: 438 NLESRPVIFEDVGRQVLATRSRKLPHELCTLIRNVKPEDVKRVASKMLRGKPAVAALGDL 497
Query: 335 INVPSYDAESAASSSQN 351
++P+Y+ A SS++
Sbjct: 498 TDLPTYEHIQTALSSKD 514
>sp|Q9DC61|MPPA_MOUSE Mitochondrial-processing peptidase subunit alpha OS=Mus musculus
GN=Pmpca PE=1 SV=1
Length = 524
Score = 60.1 bits (144), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 88/320 (27%), Positives = 130/320 (40%), Gaps = 104/320 (32%)
Query: 131 NPQSLLSEAIFSACY---SVVLANPLLAPECAISRLNSTLIKEFFAENYTAPWMVLAASG 187
+P+ LL+E I A + +V L P I++++ ++ + YT MVLA G
Sbjct: 199 DPEPLLTEMIHEAAFRENTVGLHR--FCPVENIAKIDREVLHSYLKNYYTPDRMVLAGVG 256
Query: 188 VEHDQLV----------------------------------SVEEPL----LSDLPISIL 209
VEH+ LV VE + L PI L
Sbjct: 257 VEHEHLVECARKYLVGAEPAWGAPGTVDVDRSVAQYTGGIIKVERDMSNVSLGPTPIPEL 316
Query: 210 TK---SPDLCTLEDKDAMTLTVTQMLLEGGGSFSAGGPGKGVYSRLHRRVLNEI------ 260
T + C+ + D + V M++ GGGSFSAGGPGKG++SRL+ VLN
Sbjct: 317 THIMVGLESCSFLEDDFIPFAVLNMMMGGGGSFSAGGPGKGMFSRLYLNVLNRHHWMYNA 376
Query: 261 --------------------PR--------VQQGVYFCGITPGEVNQVQLDRAVQSTNSA 292
PR + + G T V+ V+L+RA S
Sbjct: 377 TSYHHSYEDTGLLCIHASADPRQVREMVEIITKEFILMGRT---VDLVELERAKTQLMSM 433
Query: 293 ILMNLESRIVVSEDIDRQV-QTHGEMKP--------------------KLILSPLTMASY 331
++MNLESR V+ ED+ RQV TH P K++ +A+
Sbjct: 434 LMMNLESRPVIFEDVGRQVLATHSRKLPHELCTLIRNVKPEDIKRVASKMLRGKPAVAAL 493
Query: 332 GDVINVPSYDAESAASSSQN 351
GD+ ++P+Y+ AA SS+N
Sbjct: 494 GDLTDLPTYEHIQAALSSRN 513
>sp|Q68FY0|QCR1_RAT Cytochrome b-c1 complex subunit 1, mitochondrial OS=Rattus
norvegicus GN=Uqcrc1 PE=1 SV=1
Length = 480
Score = 59.7 bits (143), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 86/190 (45%), Gaps = 38/190 (20%)
Query: 52 SHPSSLPDYFYVDCGSIYESPISFVKTDLLERMAFRSTRDR-------------SNIQAS 98
SHP+ ++D GS YE+ + LE +AF+ T++R +++ A
Sbjct: 65 SHPTCTVG-VWIDVGSRYETEKNNGAGYFLEHLAFKGTKNRPGNALEKEVESIGAHLNAY 123
Query: 99 PSREQMGCSFAALETYVPEMVELLTDI--------SEATRNPQSLLSE----------AI 140
+RE AL +P++VELL DI S+ + +L E +
Sbjct: 124 STREHTAYLIKALSKDLPKVVELLADIVQNISLEDSQIEKERDVILREMQENDASMQNVV 183
Query: 141 FSACYSVV-----LANPLLAPECAISRLNSTLIKEFFAENYTAPWMVLAAS-GVEHDQLV 194
F ++ LA + P + RL+ T + ++ + +Y AP MVLAA+ GV+H QL+
Sbjct: 184 FDYLHATAFQGTPLAQAVEGPSENVRRLSRTDLTDYLSRHYKAPRMVLAAAGGVKHQQLL 243
Query: 195 SVEEPLLSDL 204
+ + S +
Sbjct: 244 DLAQDHFSSV 253
>sp|P97997|MPPA_BLAEM Mitochondrial-processing peptidase subunit alpha OS=Blastocladiella
emersonii PE=3 SV=1
Length = 474
Score = 59.7 bits (143), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 88/386 (22%), Positives = 148/386 (38%), Gaps = 114/386 (29%)
Query: 62 YVDCGSIYESPISFVKTDLLERMAFRSTRDRS-------------NIQASPSREQMGCSF 108
YVD G IYE+ I + + +AF+ST + N+ + +RE +
Sbjct: 41 YVDAGPIYETSIDRGVSHFVSSLAFKSTHGATESQVLKTMAGLGGNLFCTATRESILYQG 100
Query: 109 AALETYVPEMVELLTDIS----------------------EATRNPQSLLSEAIFSACYS 146
+ L +P V+LL D + + P + + E + + +
Sbjct: 101 SVLHHDLPRTVQLLADTTLRPALTEEEIAERRATIAFEAEDLHSRPDAFIGEMMHAVAFG 160
Query: 147 VV-LANPLLAPECAISRLNSTLIKEFFAENYTAPWMVLAASGVEHDQLVSVEEPLLSDLP 205
L N + + S I+E+FA MV+A +GV H +LV L+S
Sbjct: 161 GRGLGNSIFCEPQRARNMTSDTIREYFATYLHPSRMVVAGTGVAHAELVD----LVSKAF 216
Query: 206 ISILTKSPDLCTLED------------------------------------------KDA 223
+ T++P T D D
Sbjct: 217 VPSSTRAPSSVTHSDIETAYVGGSHQLVIPKPPPTHPNYEQTLTHVQVAFPVPPFTHPDM 276
Query: 224 MTLTVTQMLLEGGGSFSAGGPGKGVYSRLHRRVLNEIPRVQQGVYF-------------- 269
++ Q+L+ GGG+FSAGGPGKG+YSRL+ VLN ++ F
Sbjct: 277 FPVSTLQVLMGGGGAFSAGGPGKGMYSRLYTNVLNRYRWMESCAAFQHAYSSTSLFGISA 336
Query: 270 ----------CGITPGEVNQV-------QLDRAVQSTNSAILMNLESRIVVSEDIDRQVQ 312
C + GE + ++ RA S++LMNLES+++ EDI RQV
Sbjct: 337 SCVPSFNPHLCNVLAGEFVHMARNLSDEEVARAKNQLKSSLLMNLESQVITVEDIGRQVL 396
Query: 313 THGE-MKPKLILSPLTMASYGDVINV 337
+ ++P +++ ++ + D++ V
Sbjct: 397 AQNQRLEPLELVNNISAVTRDDLVRV 422
>sp|P31930|QCR1_HUMAN Cytochrome b-c1 complex subunit 1, mitochondrial OS=Homo sapiens
GN=UQCRC1 PE=1 SV=3
Length = 480
Score = 59.7 bits (143), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 82/181 (45%), Gaps = 37/181 (20%)
Query: 62 YVDCGSIYESPISFVKTDLLERMAFRSTRDR-------------SNIQASPSREQMGCSF 108
++D GS +E+ + LE +AF+ T++R +++ A +RE
Sbjct: 74 WIDVGSRFETEKNNGAGYFLEHLAFKGTKNRPGSALEKEVESMGAHLNAYSTREHTAYYI 133
Query: 109 AALETYVPEMVELLTDI--------SEATRNPQSLLSE----------AIFSACYSVV-- 148
AL +P+ VELL DI S+ + +L E +F+ ++
Sbjct: 134 KALSKDLPKAVELLGDIVQNCSLEDSQIEKERDVILREMQENDASMRDVVFNYLHATAFQ 193
Query: 149 ---LANPLLAPECAISRLNSTLIKEFFAENYTAPWMVLAAS-GVEHDQLVSVEEPLLSDL 204
LA + P + +L+ + E+ + +Y AP MVLAA+ GVEH QL+ + + L +
Sbjct: 194 GTPLAQAVEGPSENVRKLSRADLTEYLSTHYKAPRMVLAAAGGVEHQQLLDLAQKHLGGI 253
Query: 205 P 205
P
Sbjct: 254 P 254
>sp|P31800|QCR1_BOVIN Cytochrome b-c1 complex subunit 1, mitochondrial OS=Bos taurus
GN=UQCRC1 PE=1 SV=2
Length = 480
Score = 58.5 bits (140), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 81/180 (45%), Gaps = 37/180 (20%)
Query: 62 YVDCGSIYESPISFVKTDLLERMAFRSTRDR-------------SNIQASPSREQMGCSF 108
++D GS YES + +E +AF+ T++R +++ A +RE
Sbjct: 74 WIDAGSRYESEKNNGAGYFVEHLAFKGTKNRPGNALEKEVESMGAHLNAYSTREHTAYYI 133
Query: 109 AALETYVPEMVELLTDI--------SEATRNPQSLLSE----------AIFSACYSVV-- 148
AL +P+ VELL DI S+ + +L E +F+ ++
Sbjct: 134 KALSKDLPKAVELLADIVQNCSLEDSQIEKERDVILQELQENDTSMRDVVFNYLHATAFQ 193
Query: 149 ---LANPLLAPECAISRLNSTLIKEFFAENYTAPWMVLAAS-GVEHDQLVSVEEPLLSDL 204
LA + P + +L+ + E+ + +Y AP MVLAA+ G+EH QL+ + + S L
Sbjct: 194 GTPLAQSVEGPSENVRKLSRADLTEYLSRHYKAPRMVLAAAGGLEHRQLLDLAQKHFSGL 253
>sp|Q3SZ71|MPPB_BOVIN Mitochondrial-processing peptidase subunit beta OS=Bos taurus
GN=PMPCB PE=2 SV=1
Length = 490
Score = 57.0 bits (136), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 72/173 (41%), Gaps = 37/173 (21%)
Query: 61 FYVDCGSIYESPISFVKTDLLERMAFRSTRDRS-------------NIQASPSREQMGCS 107
++D GS YE+ + LE MAF+ T+ RS ++ A SREQ
Sbjct: 84 LWIDAGSRYENEKNNGTAHFLEHMAFKGTKKRSQLDLELEIENMGAHLNAYTSREQTVYY 143
Query: 108 FAALETYVPEMVELLTDI----------------------SEATRNPQSLLSEAIFSACY 145
A +P VE+L DI E N Q ++ + + + Y
Sbjct: 144 AKAFSKDLPRAVEILADIIQNSTLGEAEIERERGVILREMQEVETNLQEVVFDYLHATAY 203
Query: 146 -SVVLANPLLAPECAISRLNSTLIKEFFAENYTAPWMVLAAS-GVEHDQLVSV 196
+ L +L P I +N + ++ +Y P +VLAA+ GV HD+L+ +
Sbjct: 204 QNTALGRTILGPTENIKSINRKDLVDYITTHYKGPRIVLAAAGGVSHDELLEL 256
>sp|Q9Y8B5|MPPB_LENED Mitochondrial-processing peptidase subunit beta OS=Lentinula edodes
GN=mppB PE=3 SV=1
Length = 466
Score = 57.0 bits (136), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 76/183 (41%), Gaps = 37/183 (20%)
Query: 62 YVDCGSIYESPISFVKTDLLERMAFRSTRDRS-------------NIQASPSREQMGCSF 108
++D GS E+ + LE MAF+ T RS ++ A SREQ
Sbjct: 56 WIDAGSRAETDKTNGTAHFLEHMAFKGTGRRSQHALELEVENIGAHLNAYTSREQTVYYA 115
Query: 109 AALETYVPEMVELLTDISEAT---------------RNPQSL---LSEAIFSACYSVV-- 148
+ VP V++++DI + + R Q + L E +F ++V
Sbjct: 116 KSFSKDVPVAVDIISDILQNSKLESGAIERERDVILREQQEVDKQLEEVVFDHLHAVAFQ 175
Query: 149 ---LANPLLAPECAISRLNSTLIKEFFAENYTAPWMVLAASG-VEHDQLVSVEEPLLSDL 204
L +L P+ I + + + NYTA MVL +G V+H LV + E S L
Sbjct: 176 GQPLGRTILGPKNNILSIQRDDLASYIQTNYTADRMVLVGTGGVDHQSLVKLAEKHFSSL 235
Query: 205 PIS 207
P+S
Sbjct: 236 PVS 238
Score = 32.7 bits (73), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 34/66 (51%), Gaps = 6/66 (9%)
Query: 273 TPGEVNQVQLDRAVQSTNSAILMNLESRIVVSEDIDRQVQTHGE-MKPKLILSPLTMASY 331
T GEV +RA + +L++L+ V+EDI RQ+ T G+ M P I + + S
Sbjct: 370 TEGEV-----ERAKSQLKAGLLLSLDGTTAVAEDIGRQIVTSGKRMTPAQIENAVDAVSV 424
Query: 332 GDVINV 337
D+ V
Sbjct: 425 DDIKRV 430
>sp|Q42290|MPPB_ARATH Probable mitochondrial-processing peptidase subunit beta
OS=Arabidopsis thaliana GN=At3g02090 PE=1 SV=2
Length = 531
Score = 56.2 bits (134), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 75/355 (21%), Positives = 137/355 (38%), Gaps = 99/355 (27%)
Query: 62 YVDCGSIYESPISFVKTDLLERMAFRSTRDRS-------------NIQASPSREQMGCSF 108
++D GS +ES + LE M F+ T R+ ++ A SREQ
Sbjct: 124 WIDAGSRFESDETNGTAHFLEHMIFKGTDRRTVRALEEEIEDIGGHLNAYTSREQTTYYA 183
Query: 109 AALETYVPEMVELLTDISEATRNPQSLLS------------------EAIFSACYSVV-- 148
L++ V + +++L DI + ++ + ++ E + ++
Sbjct: 184 KVLDSNVNQALDVLADILQNSKFEEQRINRERDVILREMQEVEGQTDEVVLDHLHATAFQ 243
Query: 149 ---LANPLLAPECAISRLNSTLIKEFFAENYTAPWMVLAASG-VEHDQLVSVEEPLLS-- 202
L +L P + + ++ + +YTA MV+AA+G V+H+++V + L +
Sbjct: 244 YTPLGRTILGPAQNVKSITREDLQNYIKTHYTASRMVIAAAGAVKHEEVVEQVKKLFTKL 303
Query: 203 ----------------------------DLPISILTKSPDLCTLEDKDAMTLTVTQMLLE 234
DLP++ + + + D D++ L V Q +L
Sbjct: 304 SSDPTTTSQLVANEPASFTGSEVRMIDDDLPLAQFAVAFEGASWTDPDSVALMVMQTML- 362
Query: 235 GGGSFSAGGPGKGVYSRLHRRV-LNEIPRVQQ------------GVYFCGIT-------- 273
G + + GG GK V S L +RV +NEI GVY
Sbjct: 363 GSWNKNVGG-GKHVGSDLTQRVAINEIAESIMAFNTNYKDTGLFGVYAVAKADCLDDLSY 421
Query: 274 ---------PGEVNQVQLDRAVQSTNSAILMNLESRIVVSEDIDRQVQTHGEMKP 319
V+ + RA S++L++++ ++EDI RQ+ T+G P
Sbjct: 422 AIMYEVTKLAYRVSDADVTRARNQLKSSLLLHMDGTSPIAEDIGRQLLTYGRRIP 476
>sp|P10507|MPPB_YEAST Mitochondrial-processing peptidase subunit beta OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=MAS1 PE=1
SV=1
Length = 462
Score = 55.5 bits (132), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 78/184 (42%), Gaps = 37/184 (20%)
Query: 61 FYVDCGSIYESPISFVKTDLLERMAFRSTRDRS-------------NIQASPSREQMGCS 107
+VD GS E+ + LE +AF+ T++RS ++ A SRE
Sbjct: 52 IFVDAGSRAENVKNNGTAHFLEHLAFKGTQNRSQQGIELEIENIGSHLNAYTSRENTVYY 111
Query: 108 FAALETYVPEMVELLTDI----------SEATRNP--------QSLLSEAIFSACYSVV- 148
+L+ +P+ V++L+DI E R+ + E +F + +
Sbjct: 112 AKSLQEDIPKAVDILSDILTKSVLDNSAIERERDVIIRESEEVDKMYDEVVFDHLHEITY 171
Query: 149 ----LANPLLAPECAISRLNSTLIKEFFAENYTAPWMVLAASG-VEHDQLVSVEEPLLSD 203
L +L P I + T +K++ +NY MVLA +G V+H++LV +
Sbjct: 172 KDQPLGRTILGPIKNIKSITRTDLKDYITKNYKGDRMVLAGAGAVDHEKLVQYAQKYFGH 231
Query: 204 LPIS 207
+P S
Sbjct: 232 VPKS 235
Score = 37.0 bits (84), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 46/86 (53%), Gaps = 6/86 (6%)
Query: 256 VLNEIPRVQQGVYFCGITPGEVNQVQLDRAVQSTNSAILMNLESRIVVSEDIDRQVQTHG 315
++NEI + + I G+++ +++RA +A+L++L+ + EDI RQV T G
Sbjct: 352 IVNEILK-----EWKRIKSGKISDAEVNRAKAQLKAALLLSLDGSTAIVEDIGRQVVTTG 406
Query: 316 E-MKPKLILSPLTMASYGDVINVPSY 340
+ + P+ + + + D+I +Y
Sbjct: 407 KRLSPEEVFEQVDKITKDDIIMWANY 432
>sp|O75439|MPPB_HUMAN Mitochondrial-processing peptidase subunit beta OS=Homo sapiens
GN=PMPCB PE=1 SV=2
Length = 489
Score = 55.1 bits (131), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 74/180 (41%), Gaps = 37/180 (20%)
Query: 61 FYVDCGSIYESPISFVKTDLLERMAFRSTRDRS-------------NIQASPSREQMGCS 107
++D GS YE+ + LE MAF+ T+ RS ++ A SREQ
Sbjct: 83 LWIDAGSRYENEKNNGTAHFLEHMAFKGTKKRSQLDLELEIENMGAHLNAYTSREQTVYY 142
Query: 108 FAALETYVPEMVELLTDI----------------------SEATRNPQSLLSEAIFSACY 145
A +P VE+L DI E N Q ++ + + + Y
Sbjct: 143 AKAFSKDLPRAVEILADIIQNSTLGEAEIERERGVILREMQEVETNLQEVVFDYLHATAY 202
Query: 146 -SVVLANPLLAPECAISRLNSTLIKEFFAENYTAPWMVLAAS-GVEHDQLVSVEEPLLSD 203
+ L +L P I ++ + ++ +Y P +VLAA+ GV HD+L+ + + D
Sbjct: 203 QNTALGRTILGPTENIKSISRKDLVDYITTHYKGPRIVLAAAGGVSHDELLDLAKFHFGD 262
>sp|Q5REK3|MPPB_PONAB Mitochondrial-processing peptidase subunit beta OS=Pongo abelii
GN=PMPCB PE=2 SV=1
Length = 489
Score = 54.7 bits (130), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 74/180 (41%), Gaps = 37/180 (20%)
Query: 61 FYVDCGSIYESPISFVKTDLLERMAFRSTRDRS-------------NIQASPSREQMGCS 107
++D GS YE+ + LE MAF+ T+ RS ++ A SREQ
Sbjct: 83 LWIDAGSRYENEKNNGTAHFLEHMAFKGTKKRSQLDLELEIENMGAHLNAYTSREQTVYY 142
Query: 108 FAALETYVPEMVELLTDI----------------------SEATRNPQSLLSEAIFSACY 145
A +P VE+L DI E N Q ++ + + + Y
Sbjct: 143 AKAFSKDLPRAVEILADIIQNSTLGEAEIERERGVILREMQEVETNLQEVVFDYLHATAY 202
Query: 146 -SVVLANPLLAPECAISRLNSTLIKEFFAENYTAPWMVLAAS-GVEHDQLVSVEEPLLSD 203
+ L +L P I ++ + ++ +Y P +VLAA+ GV HD+L+ + + D
Sbjct: 203 QNTALGRTILGPTENIKSISRKDLVDYITTHYKGPRIVLAAAGGVSHDELLDLAKFHFGD 262
>sp|Q0P5M8|MPPA_BOVIN Mitochondrial-processing peptidase subunit alpha OS=Bos taurus
GN=PMPCA PE=2 SV=1
Length = 525
Score = 54.3 bits (129), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 82/315 (26%), Positives = 130/315 (41%), Gaps = 94/315 (29%)
Query: 131 NPQSLLSEAIFSACYSV-VLANPLLAPECAISRLNSTLIKEFFAENYTAPWMVLAASGVE 189
+P+ LL+E + A Y + P + +++ ++ + YT MVLA GVE
Sbjct: 200 DPEPLLTEMVHEAAYRENTVGLHRFCPAENVGKMDRDVLHAYLRNYYTPDRMVLAGVGVE 259
Query: 190 HDQLVS-VEEPLLSDLP--------------------ISILTKS-----------PDL-- 215
H QLV + LL P I L + P+L
Sbjct: 260 HAQLVECARKYLLGTCPAWGTGAAVHVDRSVAQYTGGIVKLERDMSNVSLGPTPFPELTH 319
Query: 216 -------CTLEDKDAMTLTVTQMLLEGGGSFSAGGPGKGVYSRLHRRVLNEI-------- 260
C+ + D + V M++ GGGSFSAGGPGKG+++RL+ VLN
Sbjct: 320 IMIGLESCSFLEGDFIPFAVLNMMMGGGGSFSAGGPGKGMFTRLYLNVLNRHHWMYNATS 379
Query: 261 ------------------PR-VQQGVYFCG----ITPGEVNQVQLDRAVQSTNSAILMNL 297
PR V++ V + G V+ V+L+RA S ++MNL
Sbjct: 380 YHHSYEDTGLLCIHASADPRQVREMVEIVTREFVLMAGTVDVVELERAKTQLTSMLMMNL 439
Query: 298 ESRIVVSEDIDRQVQTH-------------GEMKP--------KLILSPLTMASYGDVIN 336
E+R V+ ED+ RQV ++KP K++ +A+ GD+
Sbjct: 440 EARPVIFEDVGRQVLATRSRKLPHELCALIRDVKPEDIKRVASKMLRGKPAVAALGDLSE 499
Query: 337 VPSYDAESAASSSQN 351
+P+Y+ AA +S++
Sbjct: 500 LPAYEHVQAALASRD 514
>sp|Q9CXT8|MPPB_MOUSE Mitochondrial-processing peptidase subunit beta OS=Mus musculus
GN=Pmpcb PE=2 SV=1
Length = 489
Score = 53.9 bits (128), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 74/180 (41%), Gaps = 37/180 (20%)
Query: 61 FYVDCGSIYESPISFVKTDLLERMAFRSTRDRS-------------NIQASPSREQMGCS 107
++D GS YE+ + LE MAF+ T+ RS ++ A SREQ
Sbjct: 83 LWIDAGSRYENEKNNGTAHFLEHMAFKGTKKRSQLDLELEIENMGAHLNAYTSREQTVYY 142
Query: 108 FAALETYVPEMVELLTDI----------------------SEATRNPQSLLSEAIFSACY 145
A +P VE+L DI E N Q ++ + + + Y
Sbjct: 143 AKAFSRDLPRAVEILADIIQNSTLGEAEIERERGVILREMQEVETNLQEVVFDYLHATAY 202
Query: 146 -SVVLANPLLAPECAISRLNSTLIKEFFAENYTAPWMVLAAS-GVEHDQLVSVEEPLLSD 203
+ L +L P I +N + ++ +Y P +VLAA+ GV H++L+ + + D
Sbjct: 203 QNTALGRTILGPTENIKSINRKDLVDYITTHYKGPRIVLAAAGGVCHNELLELAKFHFGD 262
>sp|P20069|MPPA_RAT Mitochondrial-processing peptidase subunit alpha OS=Rattus
norvegicus GN=Pmpca PE=1 SV=1
Length = 524
Score = 53.9 bits (128), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 85/320 (26%), Positives = 131/320 (40%), Gaps = 104/320 (32%)
Query: 131 NPQSLLSEAIFSACY---SVVLANPLLAPECAISRLNSTLIKEFFAENYTAPWMVLAASG 187
+P+ LL+E I A + +V L P I +++ ++ + YT MVLA G
Sbjct: 199 DPEPLLTEMIHEAAFRENTVGLHR--FCPVENIGKIDREVLHSYLKNYYTPDRMVLAGVG 256
Query: 188 VEHDQLVS-VEEPLLSDLP-------ISILT-----------KSPDLCTLE--------- 219
VEH+ LV + LL P + +LT + + C +
Sbjct: 257 VEHEHLVECARKYLLGVQPAWGAPGAVWMLTAQWHSTRGGSSRWRETCQMSALRPPRFQS 316
Query: 220 -------------DKDAMTLTVTQMLLEGGGSFSAGGPGKGVYSRLHRRVLNEI------ 260
++D + V M++ GGGSFSAGGPGKG++SRL+ VLN
Sbjct: 317 SHIYGGARELLLLEEDFIPFAVLNMMMGGGGSFSAGGPGKGMFSRLYLNVLNRHHWMYNA 376
Query: 261 --------------------PR--------VQQGVYFCGITPGEVNQVQLDRAVQSTNSA 292
PR + + G T V+ V+L+RA S
Sbjct: 377 TSYHHSYEDTGLLCIHASADPRQVREMVEIITKEFILMGRT---VDLVELERAKTQLMSM 433
Query: 293 ILMNLESRIVVSEDIDRQV-QTHGEMKP--------------------KLILSPLTMASY 331
++MNLESR V+ ED+ RQV TH P K++ +A+
Sbjct: 434 LMMNLESRPVIFEDVGRQVLATHSRKLPHELCTLIRNVKPEDIKRVASKMLRGKPAVAAL 493
Query: 332 GDVINVPSYDAESAASSSQN 351
GD+ ++P+Y+ AA SS++
Sbjct: 494 GDLTDLPTYEHIQAALSSRD 513
>sp|Q03346|MPPB_RAT Mitochondrial-processing peptidase subunit beta OS=Rattus
norvegicus GN=Pmpcb PE=1 SV=3
Length = 489
Score = 52.0 bits (123), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 74/180 (41%), Gaps = 37/180 (20%)
Query: 61 FYVDCGSIYESPISFVKTDLLERMAFRSTRDRS-------------NIQASPSREQMGCS 107
++D GS YE+ + LE MAF+ T+ RS ++ A SREQ
Sbjct: 83 LWIDAGSRYENEKNNGTAHFLEHMAFKGTKKRSQLDLELEIENMGAHLNAYTSREQTVYY 142
Query: 108 FAALETYVPEMVELLTDI----------------------SEATRNPQSLLSEAIFSACY 145
A +P VE+L DI E N Q ++ + + + Y
Sbjct: 143 AKAFSKDLPRAVEILADIIQNSTLGEAEIERERGVILREMQEVETNLQEVVFDYLHATAY 202
Query: 146 -SVVLANPLLAPECAISRLNSTLIKEFFAENYTAPWMVLAAS-GVEHDQLVSVEEPLLSD 203
+ L +L P I ++ + ++ +Y P +VLAA+ GV H++L+ + + D
Sbjct: 203 QNTALGRTILGPTENIKSISRKDLVDYITTHYKGPRIVLAAAGGVCHNELLELAKFHFGD 262
>sp|P22695|QCR2_HUMAN Cytochrome b-c1 complex subunit 2, mitochondrial OS=Homo sapiens
GN=UQCRC2 PE=1 SV=3
Length = 453
Score = 50.8 bits (120), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 43/83 (51%)
Query: 120 ELLTDISEATRNPQSLLSEAIFSACYSVVLANPLLAPECAISRLNSTLIKEFFAENYTAP 179
+L D + A +NPQ+ + E + +A Y LANPL P+ I ++ S + F ++T+
Sbjct: 157 QLKIDKAVAFQNPQTHVIENLHAAAYRNALANPLYCPDYRIGKVTSEELHYFVQNHFTSA 216
Query: 180 WMVLAASGVEHDQLVSVEEPLLS 202
M L GV H L V E L+
Sbjct: 217 RMALIGLGVSHPVLKQVAEQFLN 239
>sp|P32551|QCR2_RAT Cytochrome b-c1 complex subunit 2, mitochondrial OS=Rattus
norvegicus GN=Uqcrc2 PE=1 SV=2
Length = 452
Score = 50.4 bits (119), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/178 (22%), Positives = 72/178 (40%), Gaps = 37/178 (20%)
Query: 61 FYVDCGSIYESPISFVKTDLLERMA----------FRSTRD----RSNIQASPSREQMGC 106
++ GS YE+ +++ T L R+A F+ TR + + +RE M
Sbjct: 62 LFIKAGSRYEN-YNYLGTSHLLRLASTLTTKGASSFKITRGIEAVGGKLSVTATRENMAY 120
Query: 107 SFAALETYVPEMVELLTDISEA----------------------TRNPQSLLSEAIFSAC 144
+ + + ++E L +++ A +NPQ+ + E +
Sbjct: 121 TVEGIRDDIEILMEFLLNVTTAPEFRRWEVAALRSQLKIDKAVAFQNPQTRIIENLHDVA 180
Query: 145 YSVVLANPLLAPECAISRLNSTLIKEFFAENYTAPWMVLAASGVEHDQLVSVEEPLLS 202
Y LANPL P+ + ++ S + F ++T+ M L GV H L V E L+
Sbjct: 181 YKNALANPLYCPDYRMGKITSEELHYFVQNHFTSARMALVGLGVSHSILKEVAEQFLN 238
>sp|Q9P7X1|MPPB_SCHPO Probable mitochondrial-processing peptidase subunit beta
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=qcr1 PE=2 SV=1
Length = 457
Score = 50.4 bits (119), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 74/179 (41%), Gaps = 37/179 (20%)
Query: 63 VDCGSIYESPISFVKTDLLERMAFRSTRDRS-------------NIQASPSREQMGCSFA 109
VD GS E+ + LE +AF+ T++RS ++ A SREQ
Sbjct: 50 VDAGSRAETAKNNGAAHFLEHLAFKGTKNRSQKALELEFENTGAHLNAYTSREQTVYYAH 109
Query: 110 ALETYVPEMVELLTDI--------SEATRNPQSLL----------SEAIFSACYSVV--- 148
A + VP V +L DI S R Q +L E +F ++
Sbjct: 110 AFKNAVPNAVAVLADILTNSSISASAVERERQVILREQEEVDKMADEVVFDHLHATAYQG 169
Query: 149 --LANPLLAPECAISRLNSTLIKEFFAENYTAPWMVLAASG-VEHDQLVSVEEPLLSDL 204
L +L P+ I L + ++ +NY + M+++++G + H++LV + E L
Sbjct: 170 HPLGRTILGPKENIESLTREDLLQYIKDNYRSDRMIISSAGSISHEELVKLAEKYFGHL 228
>sp|Q1RJ61|Y522_RICBR Uncharacterized zinc protease RBE_0522 OS=Rickettsia bellii (strain
RML369-C) GN=RBE_0522 PE=3 SV=1
Length = 412
Score = 50.1 bits (118), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 67/177 (37%), Gaps = 37/177 (20%)
Query: 65 CGSIYESPISFVKTDLLERMAFRSTRDRSNIQASPSREQMGCSFAAL------------- 111
GS YE+P LE MAF+ T+ R+ Q + + +G F A
Sbjct: 35 VGSRYENPGEEGIAHFLEHMAFKGTKTRTAKQIAEEFDSIGGHFNAYTGHEKTVYYSRVL 94
Query: 112 ----------------------ETYVPEMVELLTDISEATRNPQSLLSEAIFSACYSVV- 148
E E +L +I+ A NP L+ E +++ +
Sbjct: 95 SENCNKALAIIADIVQNSAFAEEEIAKEYQVILQEIAHAQDNPDDLVYEKFYNSVFKDQP 154
Query: 149 LANPLLAPECAISRLNSTLIKEFFAENYTAPWMVLAASG-VEHDQLVSVEEPLLSDL 204
L P+L I N +F ++Y A L+ +G V+H+++V E L S L
Sbjct: 155 LGKPILGTSKTIETFNRDHFLKFTGKHYNAENFYLSIAGNVDHEEIVKEAERLFSSL 211
>sp|Q4UML9|Y338_RICFE Uncharacterized zinc protease RF_0338 OS=Rickettsia felis (strain
ATCC VR-1525 / URRWXCal2) GN=RF_0338 PE=3 SV=1
Length = 412
Score = 49.7 bits (117), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 68/178 (38%), Gaps = 37/178 (20%)
Query: 65 CGSIYESPISFVKTDLLERMAFRSTRDRSNIQASPSREQMGCSFAAL------------- 111
GS YE+ + LE MAF+ T R+ Q + +++G F A
Sbjct: 35 VGSRYENSEEEGISHFLEHMAFKGTTTRTAKQIAEEFDEIGGHFNAYTGHEKTIYYARVL 94
Query: 112 ----------------------ETYVPEMVELLTDISEATRNPQSLLSEAIFSACYSVV- 148
E E +L +I+ + NP L+ E +S+ Y
Sbjct: 95 SENCDKALNILADIIQNSIFAEEEIAKEYQVILQEIAHSQDNPDDLIYEKFYSSVYKDQP 154
Query: 149 LANPLLAPECAISRLNSTLIKEFFAENYTAPWMVLAASG-VEHDQLVSVEEPLLSDLP 205
L P+L +S F ++Y A + L+ +G V+HD++VS E L S L
Sbjct: 155 LGKPILGASKTLSSFTKEHFLSFIDKHYNAGNLYLSVAGNVDHDKIVSSAERLFSSLK 212
>sp|P43264|QCR1_EUGGR Ubiquinol-cytochrome-c reductase complex core protein I,
mitochondrial OS=Euglena gracilis PE=2 SV=1
Length = 494
Score = 48.9 bits (115), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 68/182 (37%), Gaps = 38/182 (20%)
Query: 62 YVDCGSIYESPISFVKTDLLERMAFRSTRDRSNIQASPSREQMGCSFAA----------- 110
++D GS +E+ + LE M F+ T RS E+MG A
Sbjct: 53 WIDAGSRWETEKNNGVAHFLEHMNFKGTGKRSRQDIEFGMEKMGAHLNAYTSREHTCYYV 112
Query: 111 --LETYVPEMVELLTDI-SEATRNPQSL-----------------LSEAIFSACYSVV-- 148
+ VPE V++L DI + R Q L + E + +S
Sbjct: 113 KCFKKDVPEAVDILADILLNSKRTEQDLDAERQTIVQEKEDVEARIDEVLMDHLHSAAFE 172
Query: 149 ---LANPLLAPECAISR-LNSTLIKEFFAENYTAPWMVLAASG-VEHDQLVSVEEPLLSD 203
L +L P I + + +I +F +YT P M L SG V+H QL +
Sbjct: 173 GSGLGLSILGPLENIQKSITKGMIDDFVKTHYTGPRMALVGSGAVDHGQLCDLASKYFGA 232
Query: 204 LP 205
LP
Sbjct: 233 LP 234
>sp|Q86A84|MPPA1_DICDI Mitochondrial-processing peptidase subunit alpha-1 OS=Dictyostelium
discoideum GN=mppA1 PE=1 SV=1
Length = 654
Score = 47.4 bits (111), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/189 (22%), Positives = 77/189 (40%), Gaps = 47/189 (24%)
Query: 61 FYVDCGSIYESPISFVKTDLLERMAFRSTRDRS-------------NIQASPSREQMGCS 107
Y++ G+ YESP +LLE+M F+ T++ S N AS SRE + S
Sbjct: 169 LYINAGTKYESPQDRGVFNLLEKMTFKETKNNSTSEIIKELEEISMNAMASSSREMINVS 228
Query: 108 FAALETYVPEMVELLTD---------------ISEATRNPQ--------SLLSEAIFSAC 144
L + ++ +L+D I RN + L++E +
Sbjct: 229 LEVLRKDLEFVLSILSDQIKSPTYSEEELREQIEVCIRNYEMITNSSSDQLMTEILMGVA 288
Query: 145 Y------SVVLANPLLAPECAISRLNSTLIKEFFAENYTAPWMVLAASGVEHDQLVSVEE 198
+ ++V+A P +L L K + +N +V++ +G EH Q++ + +
Sbjct: 289 FGDAGLGNLVIATPEQYQNITREKLFDALRKYYVGKN-----IVISVTGAEHSQVIELVD 343
Query: 199 PLLSDLPIS 207
D+P +
Sbjct: 344 KYFGDIPFT 352
Score = 33.5 bits (75), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 72/161 (44%), Gaps = 32/161 (19%)
Query: 219 EDKDAMTLTVTQMLLEGGGSFSAGGPGKGVYSRLHRRVLNEIPRVQ---------QGVYF 269
E+KD + V Q LL GG S+S GGPGKG+ SRL+ V+ RV+ V
Sbjct: 463 ENKDIINGLVLQSLLGGGSSYSTGGPGKGMQSRLNLNVVYSSHRVKNCHAFLFVFNKVSL 522
Query: 270 CGIT----------------------PGEVNQVQLDRAVQSTNSAILMNLESRIVVSEDI 307
GI+ + Q +L+RA +S S IL NLE R V +D+
Sbjct: 523 FGISLTTQSGFLQDGIELVLQELLMLRSSMTQQELERAKRSQKSQILQNLEMRSVQCDDM 582
Query: 308 DRQVQTHGEMK-PKLILSPLTMASYGDVINVPSYDAESAAS 347
R + + G K P+ I + + D+ + S A+S S
Sbjct: 583 ARHILSFGSYKSPEQICKLIDSVTLDDIKKLISKLAQSNPS 623
>sp|Q9DB77|QCR2_MOUSE Cytochrome b-c1 complex subunit 2, mitochondrial OS=Mus musculus
GN=Uqcrc2 PE=1 SV=1
Length = 453
Score = 47.0 bits (110), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/178 (22%), Positives = 70/178 (39%), Gaps = 37/178 (20%)
Query: 61 FYVDCGSIYESPISFVKTDLLERMA----------FRSTRD----RSNIQASPSREQMGC 106
+V GS YE + + LL R+A F+ TR + + +RE M
Sbjct: 63 LFVKAGSRYEDSNNLGTSHLL-RLASSLTTKGASSFKITRGIEAVGGKLSVTATRENMAY 121
Query: 107 SFAALETYVPEMVELLTDISEA----------------------TRNPQSLLSEAIFSAC 144
+ + + + ++E L +++ A +N Q+ + E +
Sbjct: 122 TVEGIRSDIEILMEFLLNVTTAPEFRRWEVAALRSQLKIDKAVAFQNSQTRIIENLHDVA 181
Query: 145 YSVVLANPLLAPECAISRLNSTLIKEFFAENYTAPWMVLAASGVEHDQLVSVEEPLLS 202
Y LANPL P+ + ++ S + F ++T+ M L GV H L V E L+
Sbjct: 182 YKNALANPLYCPDYRMGKITSEELHYFVQNHFTSARMALVGLGVSHSVLKQVAEQFLN 239
>sp|P23004|QCR2_BOVIN Cytochrome b-c1 complex subunit 2, mitochondrial OS=Bos taurus
GN=UQCRC2 PE=1 SV=2
Length = 453
Score = 46.2 bits (108), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/178 (23%), Positives = 72/178 (40%), Gaps = 37/178 (20%)
Query: 61 FYVDCGSIYESPISFVKTDLLERMA----------FRSTRD----RSNIQASPSREQMGC 106
++ GS YE+ + + LL R+A F+ TR + + +RE M
Sbjct: 63 LFIKAGSRYENSNNLGTSHLL-RLASSLTTKGASSFKITRGIEAVGGKLSVTSTRENMAY 121
Query: 107 SFAALETYVPEMVELLTDISEA----------------------TRNPQSLLSEAIFSAC 144
+ L V ++E L +++ A +NPQ+ + E + +A
Sbjct: 122 TVECLRDDVDILMEFLLNVTTAPEFRRWEVAALQPQLRIDKAVALQNPQAHVIENLHAAA 181
Query: 145 YSVVLANPLLAPECAISRLNSTLIKEFFAENYTAPWMVLAASGVEHDQLVSVEEPLLS 202
Y LAN L P+ I ++ + ++ ++T+ M L GV H L V E L+
Sbjct: 182 YRNALANSLYCPDYRIGKVTPVELHDYVQNHFTSARMALIGLGVSHPVLKQVAEQFLN 239
>sp|Q00302|MPPB_BLAEM Mitochondrial-processing peptidase subunit beta OS=Blastocladiella
emersonii GN=MPP1 PE=3 SV=1
Length = 465
Score = 42.7 bits (99), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/181 (22%), Positives = 73/181 (40%), Gaps = 37/181 (20%)
Query: 62 YVDCGSIYESPISFVKTDLLERMAFRSTRDRS-------------NIQASPSREQMGCSF 108
++D GS E+ + LE ++F+ T+ R+ ++ A SREQ
Sbjct: 62 WIDSGSRAETKANNGVAHFLEHISFKGTKQRTQSGLEIEIENMGGHLNAYTSREQTVYYA 121
Query: 109 AALETYVPEMVELLTDI-SEATRNPQSL-----------------LSEAIFSACYSVV-- 148
V + V +L DI +T +P ++ + E +F ++
Sbjct: 122 KLFSQDVAKGVNILGDILQNSTLDPGAIDRERAVILREAEEVDKQVEEVVFDHLHAAAFP 181
Query: 149 ---LANPLLAPECAISRLNSTLIKEFFAENYTAPWMVLAASG-VEHDQLVSVEEPLLSDL 204
L +L P+ I L+ ++ + NYTA MV+ +G V+H +L + E L
Sbjct: 182 ENALGYTILGPKENIQTLSQADLQAYIKNNYTADRMVVVGAGNVDHAELCKLAETNFGKL 241
Query: 205 P 205
P
Sbjct: 242 P 242
>sp|Q68XF0|Y210_RICTY Uncharacterized zinc protease RT0210 OS=Rickettsia typhi (strain
ATCC VR-144 / Wilmington) GN=RT0210 PE=3 SV=1
Length = 412
Score = 41.6 bits (96), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 34/178 (19%), Positives = 69/178 (38%), Gaps = 37/178 (20%)
Query: 65 CGSIYESPISFVKTDLLERMAFRSTRDRSNIQASPSREQMGCSFAALETY---------- 114
G+ YE+ + LE MAF+ T+ R+ Q + + +G F A Y
Sbjct: 35 VGARYENEEEEGISHFLEHMAFKGTKTRTAQQIAEEFDSIGGYFNAYTGYENTVYYVRVL 94
Query: 115 ----------VPEMVE---------------LLTDISEATRNPQSLLSEAIFSACYSVV- 148
+ ++++ ++ +I+ NP L+ E ++ Y
Sbjct: 95 SENCHKALNILADIIQNSIFADEEISKEYQIIMQEIAHHHDNPDDLIYETFYNTVYKDQP 154
Query: 149 LANPLLAPECAISRLNSTLIKEFFAENYTAPWMVLAASG-VEHDQLVSVEEPLLSDLP 205
L +L + + F ++Y A + L+ +G +EH+++V + E L + L
Sbjct: 155 LGKSILGTAKTLVKFTQEHFLNFIGKHYNAENLYLSIAGNIEHNKIVIIAEELFASLK 212
>sp|P0A5S9|Y2805_MYCBO Uncharacterized zinc protease Mb2805c OS=Mycobacterium bovis
(strain ATCC BAA-935 / AF2122/97) GN=Mb2805c PE=3 SV=1
Length = 438
Score = 38.1 bits (87), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 38/172 (22%), Positives = 71/172 (41%), Gaps = 37/172 (21%)
Query: 62 YVDCGSIYESPISFVKTDLLERMAFRSTRDRSNIQASPSREQMG------------CSFA 109
+V GS E LE + F+ST RS + + + + +G C +A
Sbjct: 42 WVGVGSRDEGATVAGAAHFLEHLLFKSTPTRSAVDIAQAMDAVGGELNAFTAKEHTCYYA 101
Query: 110 -ALETYVPEMVELLTDISEATR----------------------NPQSLLSEAIFSACYS 146
L + +P V+L+ D+ R +P+ L++ +A +
Sbjct: 102 HVLGSDLPLAVDLVADVVLNGRCAADDVEVERDVVLEEIAMRDDDPEDALADMFLAALFG 161
Query: 147 VV-LANPLLAPECAISRLNSTLIKEFFAENYTAPWMVLAASG-VEHDQLVSV 196
+ P++ ++S + ++ F YT MV+AA+G V+HD LV++
Sbjct: 162 DHPVGRPVIGSAQSVSVMTRAQLQSFHLRRYTPERMVVAAAGNVDHDGLVAL 213
>sp|P0A5S8|Y2782_MYCTU Uncharacterized zinc protease Rv2782c/MT2852 OS=Mycobacterium
tuberculosis GN=Rv2782c PE=3 SV=1
Length = 438
Score = 38.1 bits (87), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 38/172 (22%), Positives = 71/172 (41%), Gaps = 37/172 (21%)
Query: 62 YVDCGSIYESPISFVKTDLLERMAFRSTRDRSNIQASPSREQMG------------CSFA 109
+V GS E LE + F+ST RS + + + + +G C +A
Sbjct: 42 WVGVGSRDEGATVAGAAHFLEHLLFKSTPTRSAVDIAQAMDAVGGELNAFTAKEHTCYYA 101
Query: 110 -ALETYVPEMVELLTDISEATR----------------------NPQSLLSEAIFSACYS 146
L + +P V+L+ D+ R +P+ L++ +A +
Sbjct: 102 HVLGSDLPLAVDLVADVVLNGRCAADDVEVERDVVLEEIAMRDDDPEDALADMFLAALFG 161
Query: 147 VV-LANPLLAPECAISRLNSTLIKEFFAENYTAPWMVLAASG-VEHDQLVSV 196
+ P++ ++S + ++ F YT MV+AA+G V+HD LV++
Sbjct: 162 DHPVGRPVIGSAQSVSVMTRAQLQSFHLRRYTPERMVVAAAGNVDHDGLVAL 213
>sp|Q54F93|MPPA2_DICDI Mitochondrial-processing peptidase subunit alpha-2 OS=Dictyostelium
discoideum GN=mppA2 PE=1 SV=1
Length = 445
Score = 35.4 bits (80), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 36/175 (20%), Positives = 68/175 (38%), Gaps = 35/175 (20%)
Query: 61 FYVDCGSIYESPISFVKTDLLERMAFRSTRDRSNIQ-------------ASPSREQMGCS 107
Y+ GS E+ + +L+ +AF S ++ I+ A SR+ + +
Sbjct: 49 LYIKTGSRNETQETAGLNQVLKGLAFESNTNKLGIEVQRDIEVSGSTAFAQASRDNLLIA 108
Query: 108 FAALETYVPEMVELLTDISEAT------RNPQSLL---SEAIFSACYSVV---------- 148
L +M+ L +I++ T R+ ++ SEA YS +
Sbjct: 109 LQTLPNRSLQMLNNLANITKPTLPYHEVRDVTEIIVKESEAYNHDSYSSIFESVHQTAFR 168
Query: 149 ---LANPLLAPECAISRLNSTLIKEFFAENYTAPWMVLAASGVEHDQLVSVEEPL 200
L PL+AP C + + + + Y M+L G+ H++L+ E +
Sbjct: 169 GKTLGRPLVAPICNLGNITKDAVTNWVNSTYKPSNMILVGVGLSHNELIEEAEKV 223
>sp|O31458|GAMA_BACSU Probable glucosamine-6-phosphate deaminase 2 OS=Bacillus subtilis
(strain 168) GN=gamA PE=3 SV=1
Length = 249
Score = 35.4 bits (80), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 47/103 (45%), Gaps = 11/103 (10%)
Query: 123 TDISEATRNPQSLLSEAIFSACYSVVLANPLLAPECAISRLNSTLIKEFFAENYTAPWMV 182
+D + TR + LSE+ A +P+L P AIS + I EF + +V
Sbjct: 146 SDFEDRTRVVK--LSESTIQANARFFGGDPVLVPRLAIS-MGIKTIMEF------SKHIV 196
Query: 183 LAASGVEHDQLVS--VEEPLLSDLPISILTKSPDLCTLEDKDA 223
L ASG E + E P+ +D+P SIL K + + D A
Sbjct: 197 LLASGEEKADAIQKMAEGPVTTDVPASILQKHNHVTVIADYKA 239
>sp|C3PM69|GCP_RICAE Probable tRNA threonylcarbamoyladenosine biosynthesis protein Gcp
OS=Rickettsia africae (strain ESF-5) GN=gcp PE=3 SV=1
Length = 344
Score = 34.7 bits (78), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 44/89 (49%), Gaps = 4/89 (4%)
Query: 110 ALETYVPEMVELLTDIS--EATRNPQSLLSEAIFSACYSVVLANPLLAPECAISRLNSTL 167
AL+ + E LTDIS AT P L+ I + ++ L++ L P AI+ L
Sbjct: 59 ALKNVLKESNTKLTDISTIAATSGP-GLIGGVIVGSMFAKSLSSALKKPFIAINHLEGHA 117
Query: 168 IKEFFAENYTAPWMVLAASGVEHDQLVSV 196
+ +N P+++L ASG H Q V+V
Sbjct: 118 LTARLTDNIPYPYLLLLASG-GHCQFVAV 145
>sp|A8F0E3|GCP_RICM5 Probable tRNA threonylcarbamoyladenosine biosynthesis protein Gcp
OS=Rickettsia massiliae (strain Mtu5) GN=gcp PE=3 SV=1
Length = 344
Score = 34.7 bits (78), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 44/89 (49%), Gaps = 4/89 (4%)
Query: 110 ALETYVPEMVELLTDIS--EATRNPQSLLSEAIFSACYSVVLANPLLAPECAISRLNSTL 167
AL+ + E LTDIS AT P L+ I + ++ L++ L P AI+ L
Sbjct: 59 ALKNVLKESNTKLTDISTIAATSGP-GLIGSVIVGSMFARSLSSALKKPFIAINHLEGHA 117
Query: 168 IKEFFAENYTAPWMVLAASGVEHDQLVSV 196
+ +N P+++L ASG H Q V+V
Sbjct: 118 LTARLTDNIPYPYLLLLASG-GHCQFVAV 145
>sp|A8GQJ1|GCP_RICRS Probable tRNA threonylcarbamoyladenosine biosynthesis protein Gcp
OS=Rickettsia rickettsii (strain Sheila Smith) GN=gcp
PE=3 SV=1
Length = 344
Score = 34.7 bits (78), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 44/89 (49%), Gaps = 4/89 (4%)
Query: 110 ALETYVPEMVELLTDIS--EATRNPQSLLSEAIFSACYSVVLANPLLAPECAISRLNSTL 167
AL+ + E LTDIS AT P L+ I + ++ L++ L P AI+ L
Sbjct: 59 ALKNVLKESNTKLTDISTIAATSGP-GLIGGVIVGSMFARSLSSALKKPFIAINHLEGHA 117
Query: 168 IKEFFAENYTAPWMVLAASGVEHDQLVSV 196
+ +N P+++L ASG H Q V+V
Sbjct: 118 LTARLTDNIPYPYLLLLASG-GHCQFVAV 145
>sp|B0BVX7|GCP_RICRO Probable tRNA threonylcarbamoyladenosine biosynthesis protein Gcp
OS=Rickettsia rickettsii (strain Iowa) GN=gcp PE=3 SV=1
Length = 344
Score = 34.7 bits (78), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 44/89 (49%), Gaps = 4/89 (4%)
Query: 110 ALETYVPEMVELLTDIS--EATRNPQSLLSEAIFSACYSVVLANPLLAPECAISRLNSTL 167
AL+ + E LTDIS AT P L+ I + ++ L++ L P AI+ L
Sbjct: 59 ALKNVLKESNTKLTDISTIAATSGP-GLIGGVIVGSMFARSLSSALKKPFIAINHLEGHA 117
Query: 168 IKEFFAENYTAPWMVLAASGVEHDQLVSV 196
+ +N P+++L ASG H Q V+V
Sbjct: 118 LTARLTDNIPYPYLLLLASG-GHCQFVAV 145
>sp|Q92JK6|GCP_RICCN Probable tRNA threonylcarbamoyladenosine biosynthesis protein Gcp
OS=Rickettsia conorii (strain ATCC VR-613 / Malish 7)
GN=gcp PE=3 SV=1
Length = 344
Score = 34.7 bits (78), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 44/89 (49%), Gaps = 4/89 (4%)
Query: 110 ALETYVPEMVELLTDIS--EATRNPQSLLSEAIFSACYSVVLANPLLAPECAISRLNSTL 167
AL+ + E LTDIS AT P L+ I + ++ L++ L P AI+ L
Sbjct: 59 ALKNVLKESNTKLTDISTIAATSGP-GLIGGVIVGSMFARSLSSALKKPFIAINHLEGHA 117
Query: 168 IKEFFAENYTAPWMVLAASGVEHDQLVSV 196
+ +N P+++L ASG H Q V+V
Sbjct: 118 LTARLTDNIPYPYLLLLASG-GHCQFVAV 145
>sp|C4K157|GCP_RICPU Probable tRNA threonylcarbamoyladenosine biosynthesis protein Gcp
OS=Rickettsia peacockii (strain Rustic) GN=gcp PE=3 SV=1
Length = 344
Score = 34.7 bits (78), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 44/89 (49%), Gaps = 4/89 (4%)
Query: 110 ALETYVPEMVELLTDIS--EATRNPQSLLSEAIFSACYSVVLANPLLAPECAISRLNSTL 167
AL+ + E LTDIS AT P L+ I + ++ L++ L P AI+ L
Sbjct: 59 ALKNVLKESNTKLTDISTIAATSGP-GLIGGVIVGSMFARSLSSALKKPFIAINHLEGHA 117
Query: 168 IKEFFAENYTAPWMVLAASGVEHDQLVSV 196
+ +N P+++L ASG H Q V+V
Sbjct: 118 LTARLTDNIPYPYLLLLASG-GHCQFVAV 145
>sp|Q51872|LUMQ_PHOLE Probable transcriptional regulator LumQ OS=Photobacterium
leiognathi GN=lumQ PE=4 SV=1
Length = 248
Score = 33.5 bits (75), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 44/88 (50%), Gaps = 3/88 (3%)
Query: 102 EQMGCSFAALETYVPEMVELL-TDISEATRNPQSLLSEAIFSACYSVVLANPLLAPECAI 160
EQ G S+ +L+ +++ LL T++ E + SLLS++I + ++ + +L E +
Sbjct: 85 EQFGNSYFSLDARTHQLISLLATELKEHADD--SLLSQSISNTLQCLIKRSLMLFDEKKV 142
Query: 161 SRLNSTLIKEFFAENYTAPWMVLAASGV 188
RLN LI + ++ V S V
Sbjct: 143 ERLNMVLIDNYIEQHLQKKISVAELSSV 170
>sp|Q9CD85|PHKR_MYCLE Phthiodiolone/phenolphthiodiolone dimycocerosates ketoreductase
OS=Mycobacterium leprae (strain TN) GN=ML0131 PE=3 SV=1
Length = 382
Score = 33.5 bits (75), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 13/41 (31%), Positives = 24/41 (58%)
Query: 104 MGCSFAALETYVPEMVELLTDISEATRNPQSLLSEAIFSAC 144
MG FA ++ +P+ ++ T +S A + P +L+ E +FS
Sbjct: 291 MGADFAGVQDIIPQTIDEETVVSYAAKVPAALMKEVLFSGT 331
>sp|A8EXA5|GCP_RICCK Probable tRNA threonylcarbamoyladenosine biosynthesis protein Gcp
OS=Rickettsia canadensis (strain McKiel) GN=gcp PE=3
SV=1
Length = 342
Score = 32.3 bits (72), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 45/89 (50%), Gaps = 4/89 (4%)
Query: 110 ALETYVPEMVELLTDISE--ATRNPQSLLSEAIFSACYSVVLANPLLAPECAISRLNSTL 167
AL++ + E LT+IS AT P L+ I + ++ L++ L P AI+ L
Sbjct: 59 ALKSVLKESDTKLTEISAIAATSGP-GLIGGVIVGSMFARSLSSALKKPFIAINHLEGHA 117
Query: 168 IKEFFAENYTAPWMVLAASGVEHDQLVSV 196
+ +N P+++L ASG H Q V++
Sbjct: 118 LTARLTDNIPYPYLLLLASG-GHCQFVAI 145
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.315 0.129 0.370
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 122,697,493
Number of Sequences: 539616
Number of extensions: 4960192
Number of successful extensions: 15572
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 37
Number of HSP's that attempted gapping in prelim test: 15429
Number of HSP's gapped (non-prelim): 118
length of query: 353
length of database: 191,569,459
effective HSP length: 118
effective length of query: 235
effective length of database: 127,894,771
effective search space: 30055271185
effective search space used: 30055271185
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 62 (28.5 bits)